Domain ID e5exrB2

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  • A: alpha complex topology
  • X: Cryptochrome/photolyase FAD-binding domain-related
  • H: Cryptochrome/photolyase FAD-binding domain-related
  • T: Fe-S cluster domain of DNA primase
  • F: DNA_primase_lrg
UID: 001790895
Type: Automatic domain
Parent: e3l9qA1
Range: B:258-455
Ligands: SF4
PDB: 5exr
PDB Description: DNA primase large subunit
UniProt: P49643
Hsap BLAST neighbor: P49643
Species: Homo sapiens

Structure of domain e5exrB2

Domains in the same chain:

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e5exrB1 B:22-257 PriB N-terminal domain-like PriB N-terminal domain-like PriB N-terminal domain-like
e5exrB2 B:258-455 Cryptochrome/photolyase FAD-binding domain-related Cryptochrome/photolyase FAD-binding domain-related Fe-S cluster domain of DNA primase

Domains in the same PDB:

e5exrA1 A:1-191,A:305-412 Prim-pol domain Prim-pol domain Prim-pol domain
e5exrA2 A:192-304 Insert all-alpha domain in prim-pol Insert all-alpha domain in prim-pol Insert all-alpha domain in prim-pol
e5exrB1 B:22-257 PriB N-terminal domain-like PriB N-terminal domain-like PriB N-terminal domain-like
e5exrB2 B:258-455 Cryptochrome/photolyase FAD-binding domain-related Cryptochrome/photolyase FAD-binding domain-related Fe-S cluster domain of DNA primase
e5exrC7 C:338-383,C:482-530 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5exrC5 C:384-481 Alpha-beta plaits Family B DNA polymerase insertion domain Family B DNA polymerase insertion domain
e5exrC1 C:531-808 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5exrC3 C:842-1078 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e5exrC2 C:1079-1258 "thumb" domain in bacteriophage RB69-like DNA polymerase I "thumb" domain in bacteriophage RB69-like DNA polymerase I "thumb" domain in bacteriophage RB69-like DNA polymerase I
e5exrC6 C:1266-1343 Rubredoxin-like Zinc finger domain of DNA polymerase-alpha Zinc finger domain of DNA polymerase-alpha
e5exrC4 C:1344-1456 Rubredoxin-like Zinc finger domain of DNA polymerase-alpha Zinc finger domain of DNA polymerase-alpha
e5exrD2 D:155-202,D:330-598 Carbon-nitrogen hydrolase-like Metallo-dependent phosphatases Metallo-dependent phosphatases
e5exrD1 D:203-329 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5exrE2 E:1-191,E:305-412 Prim-pol domain Prim-pol domain Prim-pol domain
e5exrE1 E:192-304 Insert all-alpha domain in prim-pol Insert all-alpha domain in prim-pol Insert all-alpha domain in prim-pol
e5exrF2 F:22-257 PriB N-terminal domain-like PriB N-terminal domain-like PriB N-terminal domain-like
e5exrF1 F:258-455 Cryptochrome/photolyase FAD-binding domain-related Cryptochrome/photolyase FAD-binding domain-related Fe-S cluster domain of DNA primase
e5exrG3 G:338-383,G:482-530 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5exrG5 G:384-481 Alpha-beta plaits Family B DNA polymerase insertion domain Family B DNA polymerase insertion domain
e5exrG7 G:531-808 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5exrG6 G:842-1078 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e5exrG4 G:1079-1258 "thumb" domain in bacteriophage RB69-like DNA polymerase I "thumb" domain in bacteriophage RB69-like DNA polymerase I "thumb" domain in bacteriophage RB69-like DNA polymerase I
e5exrG1 G:1266-1343 Rubredoxin-like Zinc finger domain of DNA polymerase-alpha Zinc finger domain of DNA polymerase-alpha
e5exrG2 G:1344-1456 Rubredoxin-like Zinc finger domain of DNA polymerase-alpha Zinc finger domain of DNA polymerase-alpha
e5exrH2 H:155-202,H:330-598 Carbon-nitrogen hydrolase-like Metallo-dependent phosphatases Metallo-dependent phosphatases
e5exrH1 H:203-329 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins