Domain ID e5gmkA5

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  • A: alpha bundles
  • X: helical bundle domain in reverse transcriptase-like polymerases
  • H: helical bundle domain in reverse transcriptase-like polymerases
  • T: helical bundle domain in reverse transcriptase-like polymerases
  • F: U6-snRNA_bdg,U5_2-snRNA_bdg
UID: 001872124
Type: Automatic domain
Parent: e3zefE2
Range: A:1256-1574
PDB: 5gmk
PDB Description: Pre-mRNA-splicing factor 8
UniProt: P33334
Hsap BLAST neighbor: Q6P2Q9
Species:

Structure of domain e5gmkA5

Domains in the same chain:

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e5gmkA1 A:127-884 Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain
e5gmkA2 A:885-1255 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e5gmkA5 A:1256-1574 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e5gmkA4 A:1575-1577,A:1599-1828 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e5gmkA3 A:1829-2085 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e5gmka1 a:29-111 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e5gmkA1 A:127-884 Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain
e5gmkA2 A:885-1255 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e5gmkA5 A:1256-1574 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e5gmkA4 A:1575-1577,A:1599-1828 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e5gmkA3 A:1829-2085 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5gmkb1 b:1-162 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e5gmkc2 c:9-59 HTH HTH tri-helical
e5gmkc1 c:60-111 HTH HTH tri-helical
e5gmkd1 d:36-275 Repetitive alpha hairpins ARM repeat ARM repeat
e5gmke1 e:44-108 SH3 SH3 SH3
e5gmkg1 g:15-108 SH3 SH3 SH3
e5gmkh1 h:12-83 SH3 SH3 SH3
e5gmkH1 H:30-96 Long alpha-hairpin ISY1 N-terminal domain-like ISY1 N-terminal domain-like
e5gmki1 i:10-92 SH3 SH3 SH3
e5gmkj1 j:2-76 SH3 SH3 SH3
e5gmkk1 k:4-55,k:75-102 SH3 SH3 SH3
e5gmkl1 l:4-85 SH3 SH3 SH3
e5gmkm1 m:1-48,m:76-109 SH3 SH3 SH3
e5gmkn1 n:151-455 beta-propeller-like beta-propeller 7-bladed
e5gmko1 o:1-52 RING/U-box-like RING/U-box-like RING/U-box
e5gmkO1 O:111-447 beta-propeller-like beta-propeller 7-bladed
e5gmkp1 p:1-52 RING/U-box-like RING/U-box-like RING/U-box
e5gmkq2 q:1-61 RING/U-box-like RING/U-box-like RING/U-box
e5gmkq1 q:144-493 beta-propeller-like beta-propeller 8-bladed
e5gmkQ1 Q:3-126 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e5gmkQ2 Q:202-264,Q:288-296 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e5gmkr1 r:1-51 RING/U-box-like RING/U-box-like RING/U-box
e5gmks1 s:6-55,s:75-102 SH3 SH3 SH3
e5gmkT1 T:1-157 Pre-mRNA-splicing factor BUD31 Pre-mRNA-splicing factor BUD31 Pre-mRNA-splicing factor BUD31
e5gmku1 u:10-92 SH3 SH3 SH3
e5gmkv1 v:569-734 Repetitive alpha hairpins ARM repeat ARM repeat
e5gmkw1 w:12-83 SH3 SH3 SH3
e5gmkx1 x:2-76 SH3 SH3 SH3
e5gmky1 y:4-85 SH3 SH3 SH3
e5gmkz1 z:1-48,z:76-109 SH3 SH3 SH3