ECOD: domain e5id6A6

Domain ID e5id6A6

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A: alpha complex topology
X: CRISPR-associated endonuclease Cpf1 second helical domain
H: CRISPR-associated endonuclease Cpf1 second helical domain
T: CRISPR-associated endonuclease Cpf1 second helical domain
F: cas_Cpf1_2nd

UID:	001830978
Type:	Manual and representative domain
Range:	A:292-514
PDB:	5id6
PDB Description:	Cpf1
UniProt:	A0A182DWE3
Species:	Lachnospiraceae bacterium ND2006

Domains in the same chain:

e5id6A1	A:1-46,A:515-583,A:679-809	OB-fold	Small protein B (SmpB)	Small protein B (SmpB)
e5id6A5	A:47-280	CRISPR-associated endonuclease first helical domain	CRISPR-associated endonuclease Cpf1 first helical domain	CRISPR-associated endonuclease Cpf1 first helical domain
e5id6A6	A:292-514	CRISPR-associated endonuclease Cpf1 second helical domain	CRISPR-associated endonuclease Cpf1 second helical domain	CRISPR-associated endonuclease Cpf1 second helical domain
e5id6A2	A:584-678	CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain	CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain	CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
e5id6A3	A:810-1003,A:1176-1227	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5id6A4	A:1004-1175	CRISPR-associated endonuclease Cpf1 nuclease domain	CRISPR-associated endonuclease Cpf1 nuclease domain	CRISPR-associated endonuclease Cpf1 nuclease domain

Domains in the same PDB:

e5id6A1	A:1-46,A:515-583,A:679-809	OB-fold	Small protein B (SmpB)	Small protein B (SmpB)
e5id6A5	A:47-280	CRISPR-associated endonuclease first helical domain	CRISPR-associated endonuclease Cpf1 first helical domain	CRISPR-associated endonuclease Cpf1 first helical domain
e5id6A6	A:292-514	CRISPR-associated endonuclease Cpf1 second helical domain	CRISPR-associated endonuclease Cpf1 second helical domain	CRISPR-associated endonuclease Cpf1 second helical domain
e5id6A2	A:584-678	CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain	CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain	CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
e5id6A3	A:810-1003,A:1176-1227	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5id6A4	A:1004-1175	CRISPR-associated endonuclease Cpf1 nuclease domain	CRISPR-associated endonuclease Cpf1 nuclease domain	CRISPR-associated endonuclease Cpf1 nuclease domain