Domain ID e5id6A6

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  • A: alpha complex topology
  • X: CRISPR-associated endonuclease Cpf1 second helical domain
  • H: CRISPR-associated endonuclease Cpf1 second helical domain
  • T: CRISPR-associated endonuclease Cpf1 second helical domain
  • F: cas_Cpf1_2nd
UID: 001830978
Type: Manual and representative domain
Range: A:292-514
PDB: 5id6
PDB Description: Cpf1
UniProt: A0A182DWE3
Species: Lachnospiraceae bacterium ND2006

Structure of domain e5id6A6

Domains in the same chain:

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e5id6A1 A:1-46,A:515-583,A:679-809 OB-fold Small protein B (SmpB) Small protein B (SmpB)
e5id6A5 A:47-280 CRISPR-associated endonuclease first helical domain CRISPR-associated endonuclease Cpf1 first helical domain CRISPR-associated endonuclease Cpf1 first helical domain
e5id6A6 A:292-514 CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain
e5id6A2 A:584-678 CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
e5id6A3 A:810-1003,A:1176-1227 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5id6A4 A:1004-1175 CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain

Domains in the same PDB:

e5id6A1 A:1-46,A:515-583,A:679-809 OB-fold Small protein B (SmpB) Small protein B (SmpB)
e5id6A5 A:47-280 CRISPR-associated endonuclease first helical domain CRISPR-associated endonuclease Cpf1 first helical domain CRISPR-associated endonuclease Cpf1 first helical domain
e5id6A6 A:292-514 CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain
e5id6A2 A:584-678 CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
e5id6A3 A:810-1003,A:1176-1227 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5id6A4 A:1004-1175 CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain