Domain ID e5lj5l1

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  • A: beta barrels
  • X: SH3
  • H: SH3
  • T: SH3
  • F: LSM
UID: 001884270
Type: Automatic domain
Parent: e1b34A1
Range: l:1-48,l:76-106
PDB: 5lj5
PDB Description: Small nuclear ribonucleoprotein Sm D1
UniProt: Q02260
Hsap BLAST neighbor: P62314
Species: Saccharomyces cerevisiae

Structure of domain e5lj5l1

Domains in the same chain:

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e5lj5l1 l:1-48,l:76-106 SH3 SH3 SH3

Domains in the same PDB:

e5lj5A6 A:128-428,A:456-883 Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain
e5lj5A3 A:884-1255 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e5lj5A4 A:1256-1574 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e5lj5A2 A:1575-1828 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e5lj5A1 A:1829-2085 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5lj5A5 A:2150-2395 Cytidine deaminase-like Cytidine deaminase-like Cytidine deaminase-like
e5lj5b1 b:4-53,b:77-102 SH3 SH3 SH3
e5lj5B2 B:442-700 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5lj5B10 B:701-905 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5lj5B11 B:906-1010 HTH HTH winged
e5lj5B12 B:1011-1142 Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like
e5lj5B8 B:1143-1198 HhH/H2TH SAM-like subdomain in Sec63-like proteins SAM-like subdomain in Sec63-like proteins
e5lj5B3 B:1199-1333 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e5lj5B1 B:1334-1541 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5lj5B4 B:1542-1740 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5lj5B5 B:1741-1824,B:1846-1858 HTH HTH winged
e5lj5B7 B:1859-1991 Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like
e5lj5B6 B:1992-2049 HhH/H2TH SAM-like subdomain in Sec63-like proteins SAM-like subdomain in Sec63-like proteins
e5lj5B9 B:2050-2163 Immunoglobulin-like beta-sandwich Immunoglobulin-related Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e5lj5C4 C:118-442 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5lj5C2 C:443-508,C:529-593 cradle loop barrel RIFT-related Alanine racemase-C
e5lj5C5 C:594-693 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e5lj5C3 C:708-855 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5lj5C1 C:856-976 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e5lj5d1 d:4-85 SH3 SH3 SH3
e5lj5e1 e:10-92 SH3 SH3 SH3
e5lj5f1 f:12-83 SH3 SH3 SH3
e5lj5g1 g:2-76 SH3 SH3 SH3
e5lj5h1 h:1-48,h:76-109 SH3 SH3 SH3
e5lj5j1 j:15-108 SH3 SH3 SH3
e5lj5J1 J:111-429,J:438-445 beta-propeller-like beta-propeller 7-bladed
e5lj5k1 k:4-53,k:77-102 SH3 SH3 SH3
e5lj5l1 l:1-48,l:76-106 SH3 SH3 SH3
e5lj5L1 L:2-156 Pre-mRNA-splicing factor BUD31 Pre-mRNA-splicing factor BUD31 Pre-mRNA-splicing factor BUD31
e5lj5m1 m:15-108 SH3 SH3 SH3
e5lj5n1 n:4-85 SH3 SH3 SH3
e5lj5N2 N:6-143 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e5lj5N1 N:204-266,N:289-296,N:306-324 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e5lj5p1 p:10-92 SH3 SH3 SH3
e5lj5q1 q:12-83 SH3 SH3 SH3
e5lj5Q3 Q:338-528,Q:712-747 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5lj5Q2 Q:529-711 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5lj5Q1 Q:748-895 Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like
e5lj5Q4 Q:896-978 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5lj5r1 r:2-76 SH3 SH3 SH3
e5lj5S1 S:37-556 Repetitive alpha hairpins ARM repeat ARM repeat
e5lj5T1 T:21-163,T:196-349,T:375-790 Repetitive alpha hairpins ARM repeat ARM repeat
e5lj5W1 W:1-167 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e5lj5Y1 Y:28-111 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD