ECOD: domain e5rubB2

Domain ID e5rubB2

A: a/b barrels
X: TIM beta/alpha-barrel
H: TIM barrels
T: TIM barrels
F: RuBisCO_large

UID:	000095432
Type:	Automatic domain
Parent:	e5rubA2
Range:	B:138-457
PDB:	5rub
PDB Description:	RUBISCO (RIBULOSE-1,5-BISPHOSPHATE CARBOXYLASE(SLASH)OXYGENASE)
UniProt:	P04718
Species:	Rhodospirillum rubrum

Domains in the same chain:

Download Pymol

e5rubB1	B:2-137	Alpha-beta plaits	RuBisCO, large subunit, small (N-terminal) domain	RuBisCO, large subunit, small (N-terminal) domain
e5rubB2	B:138-457	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Domains in the same PDB:

e5rubA1	A:2-137	Alpha-beta plaits	RuBisCO, large subunit, small (N-terminal) domain	RuBisCO, large subunit, small (N-terminal) domain
e5rubA2	A:138-457	TIM beta/alpha-barrel	TIM barrels	TIM barrels
e5rubB1	B:2-137	Alpha-beta plaits	RuBisCO, large subunit, small (N-terminal) domain	RuBisCO, large subunit, small (N-terminal) domain
e5rubB2	B:138-457	TIM beta/alpha-barrel	TIM barrels	TIM barrels

Structural contacts of domain e5rubB2 of H-group "TIM barrels":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e5rubA1	B:x,y,z->A:X,Y,Z	RuBisCO, large subunit, small (N-terminal) domain	Interaction Interface Pymol
e5rubA2	B:x,y,z->A:X,Y,Z	TIM barrels	Interaction Interface Pymol
e5rubB1	B:x,y,z->B:-X+2,Y-1/2,-Z	RuBisCO, large subunit, small (N-terminal) domain	Interaction Interface Pymol
e5rubB2	B:x,y,z->B:-X+2,Y-1/2,-Z	TIM barrels	Interaction Interface Pymol
e5rubB2	B:-X+2,Y-1/2,-Z->B:x,y,z	TIM barrels	Interaction Interface Pymol