Domain ID e5vu8A5

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: Adenylyl and guanylyl cyclase catalytic domain-like
  • T: Adenylyl and guanylyl cyclase catalytic domain-like
  • F: DNA_pol_B
UID: 002140413
Type: Automatic domain
Parent: e1tgoA4
Range: A:346-434,A:486-590
Ligands: 9O7 MG
PDB: 5vu8
PDB Description: DNA polymerase
UniProt: D0VWU9
Hsap BLAST neighbor: P09884
Species: Thermococcus kodakarensis

Structure of domain e5vu8A5

Domains in the same chain:

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e5vu8A3 A:1-33,A:115-131 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5vu8A4 A:34-114 Alpha-beta plaits Family B DNA polymerase insertion domain Family B DNA polymerase insertion domain
e5vu8A6 A:132-345 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5vu8A5 A:346-434,A:486-590 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e5vu8A1 A:435-485 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e5vu8A2 A:591-759 "thumb" domain in bacteriophage RB69-like DNA polymerase I "thumb" domain in bacteriophage RB69-like DNA polymerase I "thumb" domain in bacteriophage RB69-like DNA polymerase I

Domains in the same PDB:

e5vu8A3 A:1-33,A:115-131 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5vu8A4 A:34-114 Alpha-beta plaits Family B DNA polymerase insertion domain Family B DNA polymerase insertion domain
e5vu8A6 A:132-345 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5vu8A5 A:346-434,A:486-590 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e5vu8A1 A:435-485 "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I "fingers" domain in bacteriophage RB69-like DNA polymerase I
e5vu8A2 A:591-759 "thumb" domain in bacteriophage RB69-like DNA polymerase I "thumb" domain in bacteriophage RB69-like DNA polymerase I "thumb" domain in bacteriophage RB69-like DNA polymerase I