ECOD: domain e5wsgX1

Domain ID e5wsgX1

A: a+b two layers
X: Alpha-beta plaits
H: RNA-binding domain, RBD
T: RNA-binding domain, RBD
F: RRM_5

UID:	001949244
Type:	Automatic domain
Parent:	e2adcA1
Range:	X:29-111
PDB:	5wsg
PDB Description:	U2 small nuclear ribonucleoprotein B''
UniProt:	P40567
Hsap BLAST neighbor:	P08579
Species:

Domains in the same chain:

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e5wsgX1	X:29-111	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD

Domains in the same PDB:

e5wsgA1	A:127-884	Pre-mRNA-splicing factor 8 N-terminal domain	Pre-mRNA-splicing factor 8 N-terminal domain	Pre-mRNA-splicing factor 8 N-terminal domain
e5wsgA2	A:885-1255	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e5wsgA3	A:1256-1574	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases	helical bundle domain in reverse transcriptase-like polymerases
e5wsgA4	A:1575-1577,A:1599-1828	Restriction endonuclease-like	Restriction endonuclease-like	Restriction endonuclease-like
e5wsgA5	A:1829-2085	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5wsgc1	c:9-59	HTH	HTH	tri-helical
e5wsgc2	c:60-111,c:145-167	HTH	HTH	tri-helical
e5wsgC1	C:118-463	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5wsgC5	C:464-510,C:530-587	cradle loop barrel	RIFT-related	Alanine racemase-C
e5wsgC3	C:588-674	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e5wsgC2	C:675-858	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5wsgC4	C:859-975	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e5wsgd1	d:36-622	Repetitive alpha hairpins	ARM repeat	ARM repeat
e5wsge1	e:304-528,e:712-747	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5wsge3	e:529-711	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5wsge2	e:748-895	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like
e5wsge4	e:896-990	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5wsgf1	f:80-197,f:218-247	Functional domain of the splicing factor Prp18	Functional domain of the splicing factor Prp18	Functional domain of the splicing factor Prp18
e5wsgF1	F:6-55,F:75-102	SH3	SH3	SH3
e5wsgg1	g:15-108	SH3	SH3	SH3
e5wsgG1	G:10-92	SH3	SH3	SH3
e5wsgh1	h:12-83	SH3	SH3	SH3
e5wsgH1	H:12-83	SH3	SH3	SH3
e5wsgi1	i:10-92	SH3	SH3	SH3
e5wsgj1	j:2-76	SH3	SH3	SH3
e5wsgk1	k:4-55,k:75-102	SH3	SH3	SH3
e5wsgK1	K:2-76	SH3	SH3	SH3
e5wsgl1	l:4-85	SH3	SH3	SH3
e5wsgm1	m:1-48,m:76-109	SH3	SH3	SH3
e5wsgn1	n:151-455	beta-propeller-like	beta-propeller	7-bladed
e5wsgO1	O:111-447	beta-propeller-like	beta-propeller	7-bladed
e5wsgq2	q:1-61	RING/U-box-like	RING/U-box-like	RING/U-box
e5wsgq1	q:144-493	beta-propeller-like	beta-propeller	8-bladed
e5wsgQ2	Q:3-126	RING/U-box-like	RING/U-box-like	FYVE/PHD zinc finger
e5wsgQ1	Q:202-264,Q:288-296	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5wsgr1	r:1-51	RING/U-box-like	RING/U-box-like	RING/U-box
e5wsgR2	R:1-129	CCCH zinc finger	CCCH zinc finger	CCCH zinc finger
e5wsgR1	R:130-227	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5wsgT1	T:1-157	Pre-mRNA-splicing factor BUD31	Pre-mRNA-splicing factor BUD31	Pre-mRNA-splicing factor BUD31
e5wsgU1	U:4-85	SH3	SH3	SH3
e5wsgv1	v:156-819	Repetitive alpha hairpins	ARM repeat	ARM repeat
e5wsgV1	V:1-48,V:76-109	SH3	SH3	SH3
e5wsgW1	W:44-108	SH3	SH3	SH3
e5wsgX1	X:29-111	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5wsgY1	Y:1-162	Single-stranded right-handed beta-helix	Leucine-rich repeats	Leucine-rich repeats
e5wsgZ1	Z:8-247	Repetitive alpha hairpins	ARM repeat	ARM repeat
e5wsgZ2	Z:279-485	Repetitive alpha hairpins	ARM repeat	ARM repeat