ECOD: domain e5wyjB12

Domain ID e5wyjB12

A: beta barrels
X: cradle loop barrel
H: RIFT-related
T: Alanine racemase-C
F: RIBIOP_C

UID:	002049690
Type:	Automatic domain
Parent:	e5iw7A4
Range:	B1:929-1016
PDB:	5wyj
PDB Description:	Ribosome biogenesis protein BMS1
UniProt:	Q08965
Hsap BLAST neighbor:	Q14692
Species:

Domains in the same chain:

Download Pymol

e5wyjB12	B1:929-1016	cradle loop barrel	RIFT-related	Alanine racemase-C
e5wyjB14	B1:215-284,B1:614-636,B1:787-817	cradle loop barrel	RIFT-related	Alanine racemase-C
e5wyjB11	B1:33-214	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5wyjB13	B1:818-928	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain

Domains in the same PDB:

e5wyj3B1	3B:84-322	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e5wyj3C1	3C:84-322	Rossmann-like	Rossmann-related	S-adenosyl-L-methionine-dependent methyltransferases
e5wyj3D2	3D:168-298	Nop N-terminal domain	Nop N-terminal domain	Nop N-terminal domain
e5wyj3D3	3D:8-167	Nop N-terminal domain	Nop N-terminal domain	Nop N-terminal domain
e5wyj3D1	3D:288-329,3D:370-417	HhH/H2TH	SAM/DNA-glycosylase	Nop C-terminal domain
e5wyj3E3	3E:155-284	Nop N-terminal domain	Nop N-terminal domain	Nop N-terminal domain
e5wyj3E1	3E:3-18,3E:38-154	Nop N-terminal domain	Nop N-terminal domain	Nop N-terminal domain
e5wyj3E2	3E:285-403	HhH/H2TH	SAM/DNA-glycosylase	Nop C-terminal domain
e5wyj3F1	3F:130-361,3F:398-442,3F:474-570	beta-propeller-like	beta-propeller	7-bladed
e5wyj3G1	3G:5-126	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5wyj3H1	3H:5-126	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5wyjB12	B1:929-1016	cradle loop barrel	RIFT-related	Alanine racemase-C
e5wyjB13	B1:818-928	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e5wyjB11	B1:33-214	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5wyjB14	B1:215-284,B1:614-636,B1:787-817	cradle loop barrel	RIFT-related	Alanine racemase-C
e5wyjBA2	BA:343-620,BA:679-734	beta-propeller-like	beta-propeller	7-bladed
e5wyjBA4	BA:1-222,BA:245-343	beta-propeller-like	beta-propeller	7-bladed
e5wyjBA3	BA:735-852	Repetitive alpha hairpins	C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13	C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13
e5wyjBB4	BB:11-40,BB:386-685	beta-propeller-like	beta-propeller	7-bladed
e5wyjBB3	BB:41-275,BB:321-386	beta-propeller-like	beta-propeller	7-bladed
e5wyjBB2	BB:747-773,BB:793-913	Repetitive alpha hairpins	C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13	C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13
e5wyjBD1	BD:235-591	beta-propeller-like	beta-propeller	7-bladed
e5wyjBE2	BE:350-671,BE:793-805	beta-propeller-like	beta-propeller	7-bladed
e5wyjBE3	BE:814-939	Repetitive alpha hairpins	C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13	C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13
e5wyjBE1	BE:20-349	beta-propeller-like	beta-propeller	7-bladed
e5wyjCA1	CA:3-216	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5wyjCB4	CB:906-983,CB:1010-1091	HhH/H2TH	SAM/DNA-glycosylase	PAP/OAS1 substrate-binding domain
e5wyjCB6	CB:81-356	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e5wyjCB5	CB:357-514	HhH/H2TH	SAM/DNA-glycosylase	PAP/OAS1 substrate-binding domain
e5wyjCB3	CB:1092-1237	Alpha-beta plaits	PAP/Archaeal CCA-adding enzyme, C-terminal domain	PAP/Archaeal CCA-adding enzyme, C-terminal domain
e5wyjCB2	CB:515-698	Alpha-beta plaits	PAP/Archaeal CCA-adding enzyme, C-terminal domain	PAP/Archaeal CCA-adding enzyme, C-terminal domain
e5wyjCB1	CB:699-905	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase
e5wyjE11	E1:28-252	alpha/beta knot	alpha/beta knot	alpha/beta knot
e5wyjE21	E2:28-252	alpha/beta knot	alpha/beta knot	alpha/beta knot
e5wyjE31	E3:205-465	Repetitive alpha hairpins	ARM repeat	ARM repeat
e5wyjK12	K1:120-212	Alpha-lytic protease prodomain-like	KH-domains	Eukaryotic type KH-domain (KH-domain type I)
e5wyjK11	K1:38-119	Alpha-lytic protease prodomain-like	KH-domains	Eukaryotic type KH-domain (KH-domain type I)
e5wyjMA1	MA:29-161	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5wyjMB1	MB:84-267	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS	Anticodon-binding domain of Class II aaRS
e5wyjP11	P1:94-177	Alpha-lytic protease prodomain-like	KH-domains	Eukaryotic type KH-domain (KH-domain type I)
e5wyjP12	P1:178-266	Alpha-lytic protease prodomain-like	KH-domains	Eukaryotic type KH-domain (KH-domain type I)
e5wyjR12	R1:7-182,R1:287-361	IF3-like	EPT/RTPC-like	EPT/RTPC-like
e5wyjR11	R1:183-287	Thioredoxin-like	RNA 3'-terminal phosphate cyclase, RPTC, insert domain	RNA 3'-terminal phosphate cyclase, RPTC, insert domain
e5wyjR21	R2:1408-1418,R2:1457-1721	Repetitive alpha hairpins	ARM repeat	ARM repeat
e5wyjSc1	Sc:4-82	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5wyjSC1	SC:20-113	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e5wyjSC2	SC:114-233	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e5wyjSd1	Sd:5-67	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5wyjSf1	Sf:23-52	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e5wyjSF2	SF:9-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5wyjSF3	SF:176-245	SH3	SH3	SH3
e5wyjSF1	SF:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5wyjSg1	Sg:102-152	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5wyjSG1	SG:20-225	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e5wyjSH1	SH:1-128,SH:181-226	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e5wyjSI1	SI:4-98	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5wyjSI2	SI:118-187	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5wyjSJ1	SJ:2-123,SJ:153-200	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5wyjSK1	SK:12-186	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5wyjSM1	SM:2-142	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5wyjSN1	SN:20-143	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5wyjSO1	SO:9-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e5wyjSO2	SO:83-142	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e5wyjSP1	SP:11-119	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5wyjSR1	SR:3-127	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5wyjSX1	SX:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e5wyjSX2	SX:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e5wyjSY1	SY:43-145	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5wyjSZ1	SZ:2-102	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5wyjU41	U4:57-182	HAD domain-like	HAD domain-related	PIN domain-like
e5wyjU52	U5:64-178	Flavodoxin-like	Rossmann-like domain in Ribosomal protein L1	Rossmann-like domain in Ribosomal protein L1
e5wyjU51	U5:8-63,U5:179-255	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1