Domain ID e5y88p1

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: RNA-binding domain, RBD
  • T: RNA-binding domain, RBD
  • F: RRM_5
UID: 002407504
Type: Automatic domain
Parent: e2adcA1
Range: p:29-111
PDB: 5y88
PDB Description: U2 small nuclear ribonucleoprotein B''
UniProt: P40567
Hsap BLAST neighbor: P08579
Species:

Structure of domain e5y88p1

Domains in the same chain:

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e5y88p1 p:29-111 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD

Domains in the same PDB:

e5y88a1 a:4-55,a:75-102 SH3 SH3 SH3
e5y88A4 A:127-884 Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain
e5y88A2 A:885-1255 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e5y88A3 A:1256-1574 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e5y88A1 A:1575-1576,A:1603-1828 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e5y88A5 A:1829-2085 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5y88b1 b:10-92 SH3 SH3 SH3
e5y88c1 c:12-83 SH3 SH3 SH3
e5y88d1 d:2-76 SH3 SH3 SH3
e5y88e1 e:4-85 SH3 SH3 SH3
e5y88f1 f:1-48,f:76-109 SH3 SH3 SH3
e5y88g1 g:15-108 SH3 SH3 SH3
e5y88h1 h:6-53,h:77-102 SH3 SH3 SH3
e5y88H1 H:106-819 Repetitive alpha hairpins ARM repeat ARM repeat
e5y88i1 i:10-92 SH3 SH3 SH3
e5y88I1 I:36-275,I:295-564,I:589-641 Repetitive alpha hairpins ARM repeat ARM repeat
e5y88j1 j:12-83 SH3 SH3 SH3
e5y88k1 k:2-76 SH3 SH3 SH3
e5y88l1 l:4-85 SH3 SH3 SH3
e5y88L1 L:1-157 Pre-mRNA-splicing factor BUD31 Pre-mRNA-splicing factor BUD31 Pre-mRNA-splicing factor BUD31
e5y88m1 m:1-48,m:76-109 SH3 SH3 SH3
e5y88M2 M:3-126,M:210-213 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e5y88M1 M:214-288 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e5y88n1 n:44-108 SH3 SH3 SH3
e5y88o1 o:1-162 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e5y88O1 O:111-447 beta-propeller-like beta-propeller 7-bladed
e5y88p1 p:29-111 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e5y88W5 W:41-270 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5y88W2 W:271-452 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5y88W4 W:453-522 HTH HTH winged
e5y88W3 W:523-657 Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like
e5y88W1 W:658-755 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins