ECOD: domain e5ythA3

Domain ID e5ythA3

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A: alpha bundles
X: "fingers" domain in bacteriophage RB69-like DNA polymerase I
H: "fingers" domain in bacteriophage RB69-like DNA polymerase I
T: "fingers" domain in bacteriophage RB69-like DNA polymerase I
F: DNA_pol_A

UID:	002420770
Type:	Automatic domain
Parent:	e2hhvA2
Range:	A:423-591
Ligands:	DGT GOL
PDB:	5yth
PDB Description:	DNA polymerase I, thermostable
UniProt:	P19821
Hsap BLAST neighbor:	Q7Z5Q5
Species:	Thermus aquaticus

Domain
In chain context
In PDB context

Structure of domain e5ythA3

Domains in the same chain:

e5ythA1	A:294-422	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5ythA3	A:423-591	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I
e5ythA2	A:592-615,A:740-832	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e5ythA4	A:616-739	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I

Domains in the same PDB:

e5ythA1	A:294-422	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5ythA3	A:423-591	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I	"fingers" domain in bacteriophage RB69-like DNA polymerase I
e5ythA2	A:592-615,A:740-832	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like
e5ythA4	A:616-739	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I	helical bundle in Bacillus stearothermophilus-like DNA polymerase I