ECOD: domain e6cdiC3

Domain ID e6cdiC3

A: beta barrels
X: V1/V2 domain in HIV gp120
H: V1/V2 domain in HIV gp120
T: V1/V2 domain in HIV gp120
F: GP120

UID:	002327868
Type:	Automatic domain
Parent:	e4tvpG2
Range:	C:120-202
Ligands:	NAG
PDB:	6cdi
PDB Description:	Glycoprotein 120
UniProt:	Q2N0S5
Species:	Human immunodeficiency virus 1

Domains in the same chain:

Download Pymol

e6cdiC1	C:31-119,C:203-255,C:474-505	gp120 inner domain	gp120 inner domain	gp120 inner domain
e6cdiC3	C:120-202	V1/V2 domain in HIV gp120	V1/V2 domain in HIV gp120	V1/V2 domain in HIV gp120
e6cdiC2	C:256-473	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain

Domains in the same PDB:

e6cdi23	2:31-119,2:203-255,2:474-505	gp120 inner domain	gp120 inner domain	gp120 inner domain
e6cdi21	2:120-202	V1/V2 domain in HIV gp120	V1/V2 domain in HIV gp120	V1/V2 domain in HIV gp120
e6cdi22	2:256-473	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e6cdi31	3:1-111	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6cdi41	4:1-108	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6cdi51	5:1-111	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6cdi61	6:8-107	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6cdi71	7:1-102	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6cdi81	8:1-111	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6cdiA1	A:512-547,A:569-664	MPER trimer	MPER trimer	MPER trimer
e6cdic1	c:512-547,c:569-664	MPER trimer	MPER trimer	MPER trimer
e6cdiC1	C:31-119,C:203-255,C:474-505	gp120 inner domain	gp120 inner domain	gp120 inner domain
e6cdiC3	C:120-202	V1/V2 domain in HIV gp120	V1/V2 domain in HIV gp120	V1/V2 domain in HIV gp120
e6cdiC2	C:256-473	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e6cdid3	d:31-119,d:203-255,d:474-505	gp120 inner domain	gp120 inner domain	gp120 inner domain
e6cdid2	d:120-202	V1/V2 domain in HIV gp120	V1/V2 domain in HIV gp120	V1/V2 domain in HIV gp120
e6cdid1	d:256-473	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e6cdiD1	D:512-547,D:569-664	MPER trimer	MPER trimer	MPER trimer
e6cdih1	h:1-111	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6cdiH1	H:1-111	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6cdil1	l:1-108	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6cdiL1	L:1-108	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6cdim1	m:1-111	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6cdiM1	M:1-111	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6cdin1	n:8-107	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6cdiN1	N:8-107	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6cdiq1	q:1-111	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6cdiQ1	Q:1-111	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6cdir1	r:1-102	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6cdiR1	R:1-102	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like