ECOD: domain e6d6rK3

Domain ID e6d6rK3

A: beta barrels
X: OB-fold
H: Nucleic acid-binding proteins
T: Nucleic acid-binding proteins
F: Rrp44_CSD1

UID:	002397965
Type:	Automatic domain
Parent:	e2vnuD3
Range:	K:228-302,K:340-352
PDB:	6d6r
PDB Description:	Exosome complex exonuclease RRP44
UniProt:	Q9Y2L1
Hsap BLAST neighbor:	Q9Y2L1
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e6d6rK1	K:1-227	HAD domain-like	HAD domain-related	PIN domain-like
e6d6rK3	K:228-302,K:340-352	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6d6rK5	K:353-443	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6d6rK4	K:444-844	OB-fold	RNB domain-like	RNB domain-like
e6d6rK2	K:845-929	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins

Domains in the same PDB:

e6d6rA2	A:1-184	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6d6rA1	A:185-287	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e6d6rB2	B:3-150	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6d6rB1	B:151-243	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e6d6rC1	C:9-187	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6d6rC2	C:188-273	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e6d6rD2	D:26-146	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6d6rD1	D:147-233	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e6d6rE1	E:5-191	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6d6rE2	E:192-290	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e6d6rF2	F:29-72,F:92-175	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e6d6rF1	F:176-270	Ribonuclease PH domain 2-like	Ribonuclease PH domain 2	Ribonuclease PH domain 2
e6d6rG1	G:17-38,G:61-107	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal L27 protein
e6d6rG2	G:108-195	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6d6rG3	G:196-275	Alpha-lytic protease prodomain-like	KH-domains	Eukaryotic type KH-domain (KH-domain type I)
e6d6rH3	H:25-72	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal L27 protein
e6d6rH1	H:73-167	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6d6rH2	H:168-293	Alpha-lytic protease prodomain-like	KH-domains	Eukaryotic type KH-domain (KH-domain type I)
e6d6rI2	I:5-60	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal L27 protein
e6d6rI1	I:61-187	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6d6rK1	K:1-227	HAD domain-like	HAD domain-related	PIN domain-like
e6d6rK3	K:228-302,K:340-352	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6d6rK5	K:353-443	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6d6rK4	K:444-844	OB-fold	RNB domain-like	RNB domain-like
e6d6rK2	K:845-929	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6d6rM1	M:96-312	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6d6rM4	M:313-349,M:373-557	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6d6rM3	M:558-600,M:842-889	HTH	HTH	winged
e6d6rM2	M:890-1042	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like	Sec63 N-terminal subdomain-like