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Summary
Structure view
Domain organization
Domain ID e6gtgA3
Download files:
FASTA
Coordinates
Pymol
domain only
in chain
in PDB
SNVs
A: beta barrels
X: OB-fold
H: Small protein B (SmpB)
T: Small protein B (SmpB)
F: Unmapped domains
UID:
002432039
Type:
Automatic
domain
Parent:
e5nfvA1
Range:
A:587-661
PDB:
6gtg
PDB Description:
CRISPR-associated endonuclease Cas12a
UniProt:
A0Q7Q2
Species:
Domain
In chain context
In PDB context
Structure of domain e6gtgA3
Domains in the same chain:
Download Pymol
e6gtgA2
A:3-46,A:762-892
OB-fold
Small protein B (SmpB)
Small protein B (SmpB)
e6gtgA5
A:47-338
CRISPR-associated endonuclease first helical domain
CRISPR-associated endonuclease Cpf1 first helical domain
CRISPR-associated endonuclease Cpf1 first helical domain
e6gtgA1
A:339-589
CRISPR-associated endonuclease Cpf1 second helical domain
CRISPR-associated endonuclease Cpf1 second helical domain
CRISPR-associated endonuclease Cpf1 second helical domain
e6gtgA3
A:587-661
OB-fold
Small protein B (SmpB)
Small protein B (SmpB)
e6gtgA6
A:660-762
CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
e6gtgA4
A:893-1084,A:1248-1300
Ribonuclease H-like
Ribonuclease H-like
Ribonuclease H-like
e6gtgA7
A:1085-1247
CRISPR-associated endonuclease Cpf1 nuclease domain
CRISPR-associated endonuclease Cpf1 nuclease domain
CRISPR-associated endonuclease Cpf1 nuclease domain
Domains in the same PDB:
e6gtgA2
A:3-46,A:762-892
OB-fold
Small protein B (SmpB)
Small protein B (SmpB)
e6gtgA5
A:47-338
CRISPR-associated endonuclease first helical domain
CRISPR-associated endonuclease Cpf1 first helical domain
CRISPR-associated endonuclease Cpf1 first helical domain
e6gtgA1
A:339-589
CRISPR-associated endonuclease Cpf1 second helical domain
CRISPR-associated endonuclease Cpf1 second helical domain
CRISPR-associated endonuclease Cpf1 second helical domain
e6gtgA3
A:587-661
OB-fold
Small protein B (SmpB)
Small protein B (SmpB)
e6gtgA6
A:660-762
CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
e6gtgA4
A:893-1084,A:1248-1300
Ribonuclease H-like
Ribonuclease H-like
Ribonuclease H-like
e6gtgA7
A:1085-1247
CRISPR-associated endonuclease Cpf1 nuclease domain
CRISPR-associated endonuclease Cpf1 nuclease domain
CRISPR-associated endonuclease Cpf1 nuclease domain