Domain ID e6id1C5

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  • A: a+b two layers
  • X: Alpha-beta plaits
  • H: EF-G C-terminal domain-like
  • T: EF-G C-terminal domain-like
  • F: EFG_III
UID: 002589584
Type: Automatic domain
Parent: e1fnmA2
Range: C:581-659
PDB: 6id1
PDB Description: 116 kDa U5 small nuclear ribonucleoprotein component
Species:

Structure of domain e6id1C5

Domains in the same chain:

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e6id1C4 C:56-439 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6id1C3 C:440-580 cradle loop barrel RIFT-related Alanine racemase-C
e6id1C5 C:581-659 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e6id1C2 C:660-828 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6id1C1 C:829-943 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like

Domains in the same PDB:

e6id1a1 a:3-85 SH3 SH3 SH3
e6id1A1 A:25-811 Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain Pre-mRNA-splicing factor 8 N-terminal domain
e6id1A3 A:812-1182 Alpha-beta plaits Adenylyl and guanylyl cyclase catalytic domain-like Adenylyl and guanylyl cyclase catalytic domain-like
e6id1A4 A:1183-1502 helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases helical bundle domain in reverse transcriptase-like polymerases
e6id1A2 A:1503-1756 Restriction endonuclease-like Restriction endonuclease-like Restriction endonuclease-like
e6id1A5 A:1757-2015 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6id1b1 b:4-89 SH3 SH3 SH3
e6id1c1 c:1-82 SH3 SH3 SH3
e6id1C4 C:56-439 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6id1C3 C:440-580 cradle loop barrel RIFT-related Alanine racemase-C
e6id1C5 C:581-659 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e6id1C2 C:660-828 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6id1C1 C:829-943 Alpha-beta plaits EF-G C-terminal domain-like EF-G C-terminal domain-like
e6id1d1 d:20-116 SH3 SH3 SH3
e6id1e1 e:14-92 SH3 SH3 SH3
e6id1E1 E:54-356 beta-propeller-like beta-propeller 7-bladed
e6id1f1 f:2-75 SH3 SH3 SH3
e6id1g1 g:3-76 SH3 SH3 SH3
e6id1h1 h:4-85 SH3 SH3 SH3
e6id1i1 i:4-89 SH3 SH3 SH3
e6id1I1 I:156-819 Repetitive alpha hairpins ARM repeat ARM repeat
e6id1j1 j:1-82 SH3 SH3 SH3
e6id1J1 J:179-802 Repetitive alpha hairpins ARM repeat ARM repeat
e6id1k1 k:20-116 SH3 SH3 SH3
e6id1l1 l:14-92 SH3 SH3 SH3
e6id1m1 m:2-75 SH3 SH3 SH3
e6id1n1 n:5-76 SH3 SH3 SH3
e6id1N1 N:1-143 Pre-mRNA-splicing factor BUD31 Pre-mRNA-splicing factor BUD31 Pre-mRNA-splicing factor BUD31
e6id1o1 o:2-163 Single-stranded right-handed beta-helix Leucine-rich repeats Leucine-rich repeats
e6id1O2 O:14-89 RING/U-box-like RING/U-box-like FYVE/PHD zinc finger
e6id1O3 O:90-220 CCCH zinc finger CCCH zinc finger CCCH zinc finger
e6id1O1 O:221-303 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e6id1p1 p:3-96 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e6id1Q3 Q:19-415 Repetitive alpha hairpins ARM repeat ARM repeat
e6id1Q4 Q:416-492,Q:660-706,Q:795-1134 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6id1Q5 Q:493-659 cradle loop barrel RIFT-related Alanine racemase-C
e6id1Q1 Q:707-753,Q:773-794 Spliceosomal helicase Aquarius insert domain Spliceosomal helicase Aquarius insert domain Spliceosomal helicase Aquarius insert domain
e6id1Q2 Q:1135-1381 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6id1S1 S:8-166 Cyclophilin-like Cyclophilin-like Cyclophilin-like
e6id1T1 T:184-500 beta-propeller-like beta-propeller 7-bladed
e6id1V2 V:114-315 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6id1V4 V:316-497 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6id1V3 V:498-567 HTH HTH winged
e6id1V1 V:568-698 Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like
e6id1V5 V:699-776 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6id1y1 y:5-83 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD