Domain ID e6lqsr43

Download files:
  • A: a+b complex topology
  • X: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • H: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • T: Ribosomal L27 protein
  • F: ECR1_N
UID: 002668054
Type: Automatic domain
Parent: e2nn6H3
Range: r4:2-17,r4:50-101
PDB: 6lqs
PDB Description: Exosome complex component RRP4
Species:

Structure of domain e6lqsr43

Domains in the same chain:

Download Pymol

e6lqsr42 r4:196-245,r4:276-356 Alpha-lytic protease prodomain-like KH-domains Eukaryotic type KH-domain (KH-domain type I)
e6lqsr41 r4:102-196 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6lqsr43 r4:2-17,r4:50-101 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein

Domains in the same PDB:

e6lqs3B1 3B:82-326 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e6lqs3C1 3C:86-322 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e6lqs3D3 3D:168-298 Nop N-terminal domain Nop N-terminal domain Nop N-terminal domain
e6lqs3D2 3D:3-167 Nop N-terminal domain Nop N-terminal domain Nop N-terminal domain
e6lqs3D1 3D:288-329,3D:370-415 HhH/H2TH SAM/DNA-glycosylase Nop C-terminal domain
e6lqs3F1 3F:113-570 beta-propeller-like beta-propeller 7-bladed
e6lqs3G1 3G:5-125 Bacillus chorismate mutase-like L30e-like L30e-like
e6lqs3H1 3H:5-125 Bacillus chorismate mutase-like L30e-like L30e-like
e6lqs5C1 5C:36-466,5C:544-553 beta-propeller-like beta-propeller 8-bladed
e6lqs5F1 5F:2-183 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6lqs5G1 5G:75-267 Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS Anticodon-binding domain of Class II aaRS
e6lqsA41 A4:375-681,A4:731-776 beta-propeller-like beta-propeller 7-bladed
e6lqsA42 A4:29-374 beta-propeller-like beta-propeller 7-bladed
e6lqsA91 A9:389-516 Repetitive alpha hairpins C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13
e6lqsAF1 AF:2-364 beta-propeller-like beta-propeller 8-bladed
e6lqsAF2 AF:388-512 Repetitive alpha hairpins C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13
e6lqsB11 B1:343-646,B1:675-734 beta-propeller-like beta-propeller 7-bladed
e6lqsB12 B1:735-856 Repetitive alpha hairpins C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13
e6lqsB13 B1:2-223,B1:245-343 beta-propeller-like beta-propeller 7-bladed
e6lqsB23 B2:5-385 beta-propeller-like beta-propeller 7-bladed
e6lqsB22 B2:745-917 Repetitive alpha hairpins C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13
e6lqsB21 B2:386-687 beta-propeller-like beta-propeller 7-bladed
e6lqsB32 B3:3-331 beta-propeller-like beta-propeller 7-bladed
e6lqsB33 B3:650-817 Repetitive alpha hairpins C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13
e6lqsB31 B3:332-649 beta-propeller-like beta-propeller 7-bladed
e6lqsBE2 BE:350-670,BE:702-719 beta-propeller-like beta-propeller 7-bladed
e6lqsBE1 BE:19-349 beta-propeller-like beta-propeller 7-bladed
e6lqsBE3 BE:705-736,BE:815-939 Repetitive alpha hairpins C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13
e6lqsC42 C4:126-162,C4:186-291 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6lqsC41 C4:8-68,C4:106-115 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e6lqsM32 M3:183-248 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e6lqsM31 M3:4-22,M3:42-185 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6lqsM44 M4:666-816 SH3 SH3 SH3
e6lqsM45 M4:578-608,M4:874-910 HTH HTH winged
e6lqsM41 M4:911-1071 Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like Sec63 N-terminal subdomain-like
e6lqsM43 M4:324-361,M4:392-577 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6lqsM42 M4:80-323 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e6lqsR02 R0:1-63 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e6lqsR01 R0:62-151 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6lqsR03 R0:152-237 Alpha-lytic protease prodomain-like KH-domains Eukaryotic type KH-domain (KH-domain type I)
e6lqsR11 R1:1-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6lqsR12 R1:153-244 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e6lqsR22 R2:1-180 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6lqsR21 R2:181-265 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e6lqsR31 R3:287-394 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e6lqsR32 R3:8-99,R3:121-249,R3:270-286 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6lqsr41 r4:102-196 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6lqsr43 r4:2-17,r4:50-101 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e6lqsr42 r4:196-245,r4:276-356 Alpha-lytic protease prodomain-like KH-domains Eukaryotic type KH-domain (KH-domain type I)
e6lqsR45 R4:911-1001 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6lqsR44 R4:237-329,R4:364-399 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6lqsR41 R4:9-236 HAD domain-like HAD domain-related PIN domain-like
e6lqsR43 R4:400-494 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6lqsR42 R4:495-910 OB-fold RNB domain-like RNB domain-like
e6lqsR51 R5:3-186 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6lqsR52 R5:187-301 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e6lqsR61 R6:126-223 Ribonuclease PH domain 2-like Ribonuclease PH domain 2 Ribonuclease PH domain 2
e6lqsR62 R6:1-125 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6lqsR71 R7:33-117 Exosome complex protein LRP1 Exosome complex protein LRP1 Exosome complex protein LRP1
e6lqsRD1 RD:1192-1224,RD:1457-1721 Repetitive alpha hairpins ARM repeat ARM repeat
e6lqsRE2 RE:699-905 Nucleotidyltransferase-like Nucleotidyltransferase Nucleotidyltransferase
e6lqsRE6 RE:515-698 Alpha-beta plaits PAP/Archaeal CCA-adding enzyme, C-terminal domain PAP/Archaeal CCA-adding enzyme, C-terminal domain
e6lqsRE3 RE:1092-1237 Alpha-beta plaits PAP/Archaeal CCA-adding enzyme, C-terminal domain PAP/Archaeal CCA-adding enzyme, C-terminal domain
e6lqsRE1 RE:906-983,RE:1010-1091 HhH/H2TH SAM/DNA-glycosylase PAP/OAS1 substrate-binding domain
e6lqsRE5 RE:100-356 Nucleotidyltransferase-like Nucleotidyltransferase Nucleotidyltransferase
e6lqsRE4 RE:357-514 HhH/H2TH SAM/DNA-glycosylase PAP/OAS1 substrate-binding domain
e6lqsRF1 RF:3-272 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e6lqsRG1 RG:29-251 alpha/beta knot alpha/beta knot alpha/beta knot
e6lqsRH1 RH:16-251 alpha/beta knot alpha/beta knot alpha/beta knot
e6lqsRK2 RK:183-287 Thioredoxin-like RNA 3'-terminal phosphate cyclase, RPTC, insert domain RNA 3'-terminal phosphate cyclase, RPTC, insert domain
e6lqsRK1 RK:7-182,RK:287-366 IF3-like EPT/RTPC-like EPT/RTPC-like
e6lqsRS1 RS:209-465 Repetitive alpha hairpins ARM repeat ARM repeat
e6lqsRT2 RT:95-177 Alpha-lytic protease prodomain-like KH-domains Eukaryotic type KH-domain (KH-domain type I)
e6lqsRT1 RT:178-274 Alpha-lytic protease prodomain-like KH-domains Eukaryotic type KH-domain (KH-domain type I)
e6lqsSc1 Sc:3-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6lqsSC2 SC:13-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e6lqsSC1 SC:114-244 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e6lqsSd1 Sd:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6lqsSF3 SF:176-258 SH3 SH3 SH3
e6lqsSF2 SF:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6lqsSF1 SF:9-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6lqsSG1 SG:13-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e6lqsSH1 SH:1-62,SH:100-219 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e6lqsSI1 SI:6-96 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e6lqsSI2 SI:117-189 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e6lqsSJ1 SJ:30-121,SJ:153-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6lqsSK1 SK:12-182 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6lqsSM1 SM:6-142 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6lqsSO1 SO:83-142 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e6lqsSO2 SO:9-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e6lqsSP1 SP:11-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6lqsSR1 SR:3-127 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6lqsSX2 SX:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e6lqsSX1 SX:4-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e6lqsSY1 SY:39-144 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6lqsSZ1 SZ:4-126 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e