ECOD: domain e6msbW3

Domain ID e6msbW3

A: extended segments
X: 26S proteasome regulatory subunits C-terminal helices
H: 26S proteasome regulatory subunit RPN5 C-terminal helix
T: 26S proteasome regulatory subunit RPN5 C-terminal helix
F: RPN5_C

UID:	002426936
Type:	Automatic domain
Parent:	e3j47P1
Range:	W:421-456
PDB:	6msb
PDB Description:	26S proteasome non-ATPase regulatory subunit 12
UniProt:	O00232
Hsap BLAST neighbor:	O00232
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e6msbW2	W:1-341	Repetitive alpha hairpins	ARM repeat	ARM repeat
e6msbW1	W:342-420	HTH	HTH	winged
e6msbW3	W:421-456	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN5 C-terminal helix	26S proteasome regulatory subunit RPN5 C-terminal helix

Domains in the same PDB:

e6msba3	a:4-259	Repetitive alpha hairpins	ARM repeat	ARM repeat
e6msba1	a:260-339	HTH	HTH	winged
e6msba2	a:340-376	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN9 C-terminal helix	26S proteasome regulatory subunit RPN9 C-terminal helix
e6msbA2	A:140-326	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6msbA1	A:327-433	Histone-like	Histone-related	AAA+ ATPase lid domain
e6msbb1	b:1-191	HAD domain-like	HAD domain-related	vWA-like
e6msbc1	c:24-209	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e6msbc2	c:210-310	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain
e6msbd1	d:1-172	Repetitive alpha hairpins	ARM repeat	ARM repeat
e6msbd2	d:173-257	HTH	HTH	winged
e6msbD1	D:39-145	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6msbD3	D:146-335	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6msbD2	D:336-418	Histone-like	Histone-related	AAA+ ATPase lid domain
e6msbE1	E:15-114	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6msbE3	E:115-304	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6msbE2	E:304-389	Histone-like	Histone-related	AAA+ ATPase lid domain
e6msbf2	f:1-357	Repetitive alpha hairpins	26S proteasome subunit Rpn2 N-terminal domain	26S proteasome subunit Rpn2 N-terminal domain
e6msbf3	f:350-889	Repetitive alpha hairpins	Proteasome/cyclosome (PC) repeat	Proteasome/cyclosome (PC) repeat
e6msbF1	F:44-99,F:120-166	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e6msbF2	F:167-356	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e6msbF3	F:357-439	Histone-like	Histone-related	AAA+ ATPase lid domain
e6msbg1	g:5-244	Ntn/PP2C	Ntn	Proteasome subunits
e6msbG1	G:5-244	Ntn/PP2C	Ntn	Proteasome subunits
e6msbh1	h:3-234	Ntn/PP2C	Ntn	Proteasome subunits
e6msbH1	H:3-234	Ntn/PP2C	Ntn	Proteasome subunits
e6msbi1	i:2-251	Ntn/PP2C	Ntn	Proteasome subunits
e6msbI1	I:2-251	Ntn/PP2C	Ntn	Proteasome subunits
e6msbj1	j:2-240	Ntn/PP2C	Ntn	Proteasome subunits
e6msbJ1	J:2-240	Ntn/PP2C	Ntn	Proteasome subunits
e6msbk1	k:8-241	Ntn/PP2C	Ntn	Proteasome subunits
e6msbK1	K:8-241	Ntn/PP2C	Ntn	Proteasome subunits
e6msbl1	l:4-241	Ntn/PP2C	Ntn	Proteasome subunits
e6msbL1	L:4-241	Ntn/PP2C	Ntn	Proteasome subunits
e6msbm1	m:5-244	Ntn/PP2C	Ntn	Proteasome subunits
e6msbM1	M:5-244	Ntn/PP2C	Ntn	Proteasome subunits
e6msbn1	n:1-191	Ntn/PP2C	Ntn	Proteasome subunits
e6msbN1	N:1-191	Ntn/PP2C	Ntn	Proteasome subunits
e6msbo1	o:1-220	Ntn/PP2C	Ntn	Proteasome subunits
e6msbO1	O:1-220	Ntn/PP2C	Ntn	Proteasome subunits
e6msbp1	p:2-205	Ntn/PP2C	Ntn	Proteasome subunits
e6msbP1	P:2-205	Ntn/PP2C	Ntn	Proteasome subunits
e6msbq1	q:1-199	Ntn/PP2C	Ntn	Proteasome subunits
e6msbQ1	Q:1-199	Ntn/PP2C	Ntn	Proteasome subunits
e6msbr1	r:1-201	Ntn/PP2C	Ntn	Proteasome subunits
e6msbR1	R:1-201	Ntn/PP2C	Ntn	Proteasome subunits
e6msbs1	s:1-213	Ntn/PP2C	Ntn	Proteasome subunits
e6msbS1	S:1-213	Ntn/PP2C	Ntn	Proteasome subunits
e6msbt1	t:1-215	Ntn/PP2C	Ntn	Proteasome subunits
e6msbT1	T:1-215	Ntn/PP2C	Ntn	Proteasome subunits
e6msbu1	u:1-76	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e6msbU3	U:7-270,U:320-345	Repetitive alpha hairpins	26S proteasome subunit Rpn2 N-terminal domain	26S proteasome subunit Rpn2 N-terminal domain
e6msbU2	U:346-784	Repetitive alpha hairpins	Proteasome/cyclosome (PC) repeat	Proteasome/cyclosome (PC) repeat
e6msbU1	U:785-816,U:878-917	26S proteasome subunit Rpn2 C-terminal domain	26S proteasome subunit Rpn2 C-terminal domain	26S proteasome subunit Rpn2 C-terminal domain
e6msbV1	V:18-394	Repetitive alpha hairpins	ARM repeat	ARM repeat
e6msbV3	V:394-463	HTH	HTH	winged
e6msbV2	V:464-525	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN3 C-terminal helix	26S proteasome regulatory subunit RPN3 C-terminal helix
e6msbw1	w:1-76	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e6msbW2	W:1-341	Repetitive alpha hairpins	ARM repeat	ARM repeat
e6msbW1	W:342-420	HTH	HTH	winged
e6msbW3	W:421-456	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN5 C-terminal helix	26S proteasome regulatory subunit RPN5 C-terminal helix
e6msbX3	X:43-316	Repetitive alpha hairpins	ARM repeat	ARM repeat
e6msbX1	X:314-393	HTH	HTH	winged
e6msbX2	X:393-422	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN6 C-termial helix	26S proteasome regulatory subunit RPN6 C-termial helix
e6msbY3	Y:12-282	Repetitive alpha hairpins	ARM repeat	ARM repeat
e6msbY2	Y:283-362	HTH	HTH	winged
e6msbY1	Y:363-389	26S proteasome regulatory subunits C-terminal helices	26S proteasome regulatory subunit RPN7 C-terminal helix	26S proteasome regulatory subunit RPN7 C-terminal helix
e6msbZ1	Z:5-184	Cytidine deaminase-like	Cytidine deaminase-like	Cytidine deaminase-like
e6msbZ2	Z:185-290	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain	26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain