Domain ID e6nm9D5

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  • A: beta barrels
  • X: OB-fold
  • H: Small protein B (SmpB)
  • T: Small protein B (SmpB)
  • F: Unmapped domains
UID: 002496908
Type: Automatic domain
Parent: e5id6A1
Range: D:1-46,D:515-583,D:679-809
Ligands: MG
PDB: 6nm9
PDB Description: Cpf1
UniProt: A0A182DWE3
Species: Lachnospiraceae bacterium ND2006

Structure of domain e6nm9D5

Domains in the same chain:

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e6nm9D5 D:1-46,D:515-583,D:679-809 OB-fold Small protein B (SmpB) Small protein B (SmpB)
e6nm9D2 D:47-289 CRISPR-associated endonuclease first helical domain CRISPR-associated endonuclease Cpf1 first helical domain CRISPR-associated endonuclease Cpf1 first helical domain
e6nm9D3 D:290-514 CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain
e6nm9D6 D:584-678 CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
e6nm9D4 D:810-1003,D:1176-1227 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6nm9D1 D:1004-1175 CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain

Domains in the same PDB:

e6nm9B4 B:1-46,B:515-583,B:679-809 OB-fold Small protein B (SmpB) Small protein B (SmpB)
e6nm9B2 B:47-289 CRISPR-associated endonuclease first helical domain CRISPR-associated endonuclease Cpf1 first helical domain CRISPR-associated endonuclease Cpf1 first helical domain
e6nm9B6 B:290-514 CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain
e6nm9B5 B:584-678 CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
e6nm9B1 B:810-1003,B:1176-1227 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6nm9B3 B:1004-1175 CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain
e6nm9D5 D:1-46,D:515-583,D:679-809 OB-fold Small protein B (SmpB) Small protein B (SmpB)
e6nm9D2 D:47-289 CRISPR-associated endonuclease first helical domain CRISPR-associated endonuclease Cpf1 first helical domain CRISPR-associated endonuclease Cpf1 first helical domain
e6nm9D3 D:290-514 CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain
e6nm9D6 D:584-678 CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
e6nm9D4 D:810-1003,D:1176-1227 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6nm9D1 D:1004-1175 CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain