Domain ID e6nmaB1

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  • A: alpha complex topology
  • X: CRISPR-associated endonuclease Cpf1 second helical domain
  • H: CRISPR-associated endonuclease Cpf1 second helical domain
  • T: CRISPR-associated endonuclease Cpf1 second helical domain
  • F: cas_Cpf1_2nd
UID: 002496910
Type: Automatic domain
Parent: e5b43A6
Range: B:290-514
PDB: 6nma
PDB Description: Cpf1
UniProt: A0A182DWE3
Species: Lachnospiraceae bacterium ND2006

Structure of domain e6nmaB1

Domains in the same chain:

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e6nmaB3 B:1-46,B:515-583,B:679-809 OB-fold Small protein B (SmpB) Small protein B (SmpB)
e6nmaB2 B:47-289 CRISPR-associated endonuclease first helical domain CRISPR-associated endonuclease Cpf1 first helical domain CRISPR-associated endonuclease Cpf1 first helical domain
e6nmaB1 B:290-514 CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain
e6nmaB4 B:584-678 CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
e6nmaB6 B:810-1003,B:1176-1227 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6nmaB5 B:1004-1175 CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain

Domains in the same PDB:

e6nmaB3 B:1-46,B:515-583,B:679-809 OB-fold Small protein B (SmpB) Small protein B (SmpB)
e6nmaB2 B:47-289 CRISPR-associated endonuclease first helical domain CRISPR-associated endonuclease Cpf1 first helical domain CRISPR-associated endonuclease Cpf1 first helical domain
e6nmaB1 B:290-514 CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain
e6nmaB4 B:584-678 CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
e6nmaB6 B:810-1003,B:1176-1227 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6nmaB5 B:1004-1175 CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain