ECOD: domain e6udkR3

Domain ID e6udkR3

A: a+b two layers
X: gp120 inner domain
H: gp120 inner domain
T: gp120 inner domain
F: GP120

UID:	002573165
Type:	Automatic domain
Parent:	e2nxyA3
Range:	R:31-119,R:203-255,R:474-505
Ligands:	NAG
PDB:	6udk
PDB Description:	RC1 variant of HIV-1 Env glycoprotein gp120
Species:

Domains in the same chain:

Download Pymol

e6udkR3	R:31-119,R:203-255,R:474-505	gp120 inner domain	gp120 inner domain	gp120 inner domain
e6udkR1	R:120-202	V1/V2 domain in HIV gp120	V1/V2 domain in HIV gp120	V1/V2 domain in HIV gp120
e6udkR2	R:256-473	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain

Domains in the same PDB:

e6udkA1	A:1-114	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6udkB1	B:8-108	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6udkC1	C:519-546,C:572-663	MPER trimer	MPER trimer	MPER trimer
e6udkD1	D:2-113	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6udkE1	E:1-107	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6udkF1	F:1-114	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6udkG3	G:31-119,G:203-255,G:474-505	gp120 inner domain	gp120 inner domain	gp120 inner domain
e6udkG1	G:120-202	V1/V2 domain in HIV gp120	V1/V2 domain in HIV gp120	V1/V2 domain in HIV gp120
e6udkG2	G:256-473	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e6udkH1	H:2-113	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6udkI1	I:8-108	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6udkJ1	J:519-546,J:572-663	MPER trimer	MPER trimer	MPER trimer
e6udkK3	K:31-119,K:203-255,K:474-505	gp120 inner domain	gp120 inner domain	gp120 inner domain
e6udkK2	K:120-202	V1/V2 domain in HIV gp120	V1/V2 domain in HIV gp120	V1/V2 domain in HIV gp120
e6udkK1	K:256-473	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e6udkL1	L:1-107	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6udkM1	M:2-113	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6udkN1	N:1-107	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6udkO1	O:1-114	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6udkP1	P:8-108	Immunoglobulin-like beta-sandwich	Immunoglobulin-related	Immunoglobulin/Fibronectin type III/E set domains/PapD-like
e6udkQ1	Q:519-546,Q:572-663	MPER trimer	MPER trimer	MPER trimer
e6udkR3	R:31-119,R:203-255,R:474-505	gp120 inner domain	gp120 inner domain	gp120 inner domain
e6udkR1	R:120-202	V1/V2 domain in HIV gp120	V1/V2 domain in HIV gp120	V1/V2 domain in HIV gp120
e6udkR2	R:256-473	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain