Domain ID e6zqdDE3

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  • A: a+b two layers
  • X: beta-Grasp
  • H: Ubiquitin-related
  • T: Alpha-L RNA-binding motif
  • F: Ribosomal_S4e,S4,RS4NT
UID: 002677312
Type: Automatic domain
Parent: e8cdlh1
Range: DE:2-116
PDB: 6zqd
PDB Description: 40S ribosomal protein S4-A
Species:

Structure of domain e6zqdDE3

Domains in the same chain:

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e6zqdDE1 DE:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6zqdDE2 DE:176-247 SH3 SH3 SH3
e6zqdDE3 DE:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif

Domains in the same PDB:

e6zqdCA1 CA:80-326 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e6zqdCB1 CB:85-324 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e6zqdCD1 CD:288-329,CD:370-415 HhH/H2TH SAM/DNA-glycosylase Nop C-terminal domain
e6zqdCD2 CD:3-167 Nop N-terminal domain Nop N-terminal domain Nop N-terminal domain
e6zqdCD3 CD:168-298 Nop N-terminal domain Nop N-terminal domain Nop N-terminal domain
e6zqdCF1 CF:5-125 Bacillus chorismate mutase-like L30e-like L30e-like
e6zqdCG1 CG:5-125 Bacillus chorismate mutase-like L30e-like L30e-like
e6zqdCH1 CH:115-572 beta-propeller-like beta-propeller 7-bladed
e6zqdCI1 CI:2-183 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6zqdCM1 CM:7-182,CM:287-366 IF3-like EPT/RTPC-like EPT/RTPC-like
e6zqdCM2 CM:183-287 Thioredoxin-like RNA 3'-terminal phosphate cyclase, RPTC, insert domain RNA 3'-terminal phosphate cyclase, RPTC, insert domain
e6zqdCN1 CN:3-230,CN:252-270 Alpha-beta plaits RNA-binding domain, RBD RNA-binding domain, RBD
e6zqdDA2 DA:2-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e6zqdDA1 DA:114-245 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e6zqdDb1 Db:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e6zqdDc1 Dc:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6zqdDE1 DE:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6zqdDE3 DE:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6zqdDE2 DE:176-247 SH3 SH3 SH3
e6zqdDF1 DF:13-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e6zqdDG1 DG:1-218 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e6zqdDH1 DH:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e6zqdDH2 DH:4-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e6zqdDI1 DI:2-123,DI:146-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e6zqdDJ1 DJ:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e6zqdDL1 DL:6-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6zqdDN1 DN:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e6zqdDN2 DN:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e6zqdDO1 DO:11-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e6zqdDQ1 DQ:3-127 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e6zqdDS1 DS:2-120 HhH/H2TH H2TH H2TH
e6zqdDT1 DT:2-144 HTH HTH winged
e6zqdDW1 DW:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e6zqdDW2 DW:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e6zqdDX1 DX:2-144 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e6zqdDY1 DY:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e6zqdJF1 JF:29-251 alpha/beta knot alpha/beta knot alpha/beta knot
e6zqdJG1 JG:16-251 alpha/beta knot alpha/beta knot alpha/beta knot
e6zqdJH1 JH:205-466 Repetitive alpha hairpins ARM repeat ARM repeat
e6zqdJI1 JI:1457-1721 Repetitive alpha hairpins ARM repeat ARM repeat
e6zqdJJ2 JJ:90-177 Alpha-lytic protease prodomain-like KH-domains Eukaryotic type KH-domain (KH-domain type I)
e6zqdJJ1 JJ:178-273 Alpha-lytic protease prodomain-like KH-domains Eukaryotic type KH-domain (KH-domain type I)
e6zqdJL2 JL:217-318 HhH/H2TH H2TH H2TH
e6zqdJL1 JL:36-216 Rossmann-like Rossmann-related S-adenosyl-L-methionine-dependent methyltransferases
e6zqdUA1 UA:343-632,UA:675-734 beta-propeller-like beta-propeller 7-bladed
e6zqdUA2 UA:735-856 Repetitive alpha hairpins C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13
e6zqdUA3 UA:2-223,UA:245-343 beta-propeller-like beta-propeller 7-bladed
e6zqdUD2 UD:375-666,UD:731-776 beta-propeller-like beta-propeller 7-bladed
e6zqdUD1 UD:29-374 beta-propeller-like beta-propeller 7-bladed
e6zqdUE1 UE:3-372 beta-propeller-like beta-propeller 8-bladed
e6zqdUE2 UE:434-557 Repetitive alpha hairpins C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13
e6zqdUI1 UI:428-515 Repetitive alpha hairpins C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13
e6zqdUL1 UL:745-773,UL:793-918 Repetitive alpha hairpins C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13
e6zqdUL2 UL:5-40,UL:386-687 beta-propeller-like beta-propeller 7-bladed
e6zqdUL3 UL:41-275,UL:321-386 beta-propeller-like beta-propeller 7-bladed
e6zqdUM1 UM:332-649 beta-propeller-like beta-propeller 7-bladed
e6zqdUM3 UM:650-817 Repetitive alpha hairpins C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13
e6zqdUM2 UM:7-331 beta-propeller-like beta-propeller 7-bladed
e6zqdUO2 UO:388-512 Repetitive alpha hairpins C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13
e6zqdUO1 UO:2-364 beta-propeller-like beta-propeller 8-bladed
e6zqdUV5 UV:515-698 Alpha-beta plaits PAP/Archaeal CCA-adding enzyme, C-terminal domain PAP/Archaeal CCA-adding enzyme, C-terminal domain
e6zqdUV1 UV:357-514 HhH/H2TH SAM/DNA-glycosylase PAP/OAS1 substrate-binding domain
e6zqdUV3 UV:96-356 Nucleotidyltransferase-like Nucleotidyltransferase Nucleotidyltransferase
e6zqdUV6 UV:699-905 Nucleotidyltransferase-like Nucleotidyltransferase Nucleotidyltransferase
e6zqdUV4 UV:1092-1237 Alpha-beta plaits PAP/Archaeal CCA-adding enzyme, C-terminal domain PAP/Archaeal CCA-adding enzyme, C-terminal domain
e6zqdUV2 UV:906-983,UV:1010-1091 HhH/H2TH SAM/DNA-glycosylase PAP/OAS1 substrate-binding domain
e6zqdUX1 UX:4-21,UX:41-189 HAD domain-like HAD domain-related PIN domain-like