ECOD: domain e8bpxR1

Domain ID e8bpxR1

A: few secondary structure elements
X: Rubredoxin-like
H: Rubredoxin-related
T: Cytochrome c oxidase Subunit F
F: zf-CHCC

UID:	002984064
Type:	Automatic domain
Parent:	e2jz8A1
Range:	R:37-109
Ligands:	ZN
PDB:	8bpx
PDB Description:	NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial
Species:

Domains in the same chain:

Download Pymol

e8bpxR1	R:37-109	Rubredoxin-like	Rubredoxin-related	Cytochrome c oxidase Subunit F

Domains in the same PDB:

e8bpxa1	a:3-60	Mitochondrial complex I, MWFE subunit	Mitochondrial complex I, MWFE subunit	Mitochondrial complex I, MWFE subunit
e8bpxAA2	AA:75-289	LuxS, MPP, ThrRS/AlaRS common domain	LuxS, MPP, ThrRS/AlaRS common domain	LuxS/MPP-like metallohydrolase
e8bpxAA1	AA:290-502	LuxS, MPP, ThrRS/AlaRS common domain	LuxS, MPP, ThrRS/AlaRS common domain	LuxS/MPP-like metallohydrolase
e8bpxAC1	AC:2-267	Transmembrane heme-binding four-helical bundle	Transmembrane heme-binding four-helical bundle	Transmembrane di-heme cytochromes
e8bpxAC2	AC:268-388	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e8bpxAD1	AD:143-212,AD:255-271	ISP domain	ISP domain	ISP domain
e8bpxAD2	AD:76-142	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor
e8bpxAD3	AD:213-254	Trm112p-like	Trm112p-like	Trm112p-like
e8bpxAE1	AE:262-307	cytochrome c1 transmembrane anchor	cytochrome c1 transmembrane anchor	cytochrome c1 transmembrane anchor
e8bpxAE2	AE:64-261	Cytochrome c-like	Cytochrome c	Cytochrome c
e8bpxAF1	AF:30-122	14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e8bpxAG1	AG:4-72	Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e8bpxAH1	AH:6-69	cytochrome bc1 complex 11 kDa protein-like	Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e8bpxAI1	AI:13-69	Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e8bpxB1	B:62-218	Flavodoxin-like	Class I glutamine amidotransferase-like	CheY-like
e8bpxBA1	BA:290-502	LuxS, MPP, ThrRS/AlaRS common domain	LuxS, MPP, ThrRS/AlaRS common domain	LuxS/MPP-like metallohydrolase
e8bpxBA2	BA:75-289	LuxS, MPP, ThrRS/AlaRS common domain	LuxS, MPP, ThrRS/AlaRS common domain	LuxS/MPP-like metallohydrolase
e8bpxBC1	BC:268-388	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e8bpxBC2	BC:2-267	Transmembrane heme-binding four-helical bundle	Transmembrane heme-binding four-helical bundle	Transmembrane di-heme cytochromes
e8bpxBD3	BD:77-142	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor	iron-sulfur subunit (ISP) transmembrane anchor
e8bpxBD2	BD:213-254	Trm112p-like	Trm112p-like	Trm112p-like
e8bpxBD1	BD:143-212,BD:255-271	ISP domain	ISP domain	ISP domain
e8bpxBE2	BE:64-261	Cytochrome c-like	Cytochrome c	Cytochrome c
e8bpxBE1	BE:262-307	cytochrome c1 transmembrane anchor	cytochrome c1 transmembrane anchor	cytochrome c1 transmembrane anchor
e8bpxBF1	BF:30-122	14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e8bpxBG1	BG:5-72	Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e8bpxBH1	BH:7-69	cytochrome bc1 complex 11 kDa protein-like	Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e8bpxBI1	BI:13-69	Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e8bpxC1	C:1-181	Nqo5-like	Nqo5-like	Nqo5-like
e8bpxD3	D:10-49,D:364-394	FAD-linked reductases, C-terminal domain-like	Ni-Fe binding domain in nickel-iron hydrogenase large subunit	Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e8bpxD1	D:50-92,D:291-363	FAD-linked reductases, C-terminal domain-like	Ni-Fe binding domain in nickel-iron hydrogenase large subunit	Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e8bpxD2	D:93-290	alpha-helical domain in nickel-iron hydrogenase, large subunit	alpha-helical domain in nickel-iron hydrogenase, large subunit	alpha-helical domain in nickel-iron hydrogenase, large subunit
e8bpxe1	e:2-65	cytochrome bc1 complex 11 kDa protein-like	CHCH domain	CHCH domain
e8bpxE2	E:30-121	NQO2 helical bundle domain	NQO2 helical bundle domain	NQO2 helical bundle domain
e8bpxE1	E:122-221	Thioredoxin-like	Thioredoxin-like	Thioredoxin-like
e8bpxF1	F:51-296	Nqo1 FMN-binding domain-like	Nqo1 FMN-binding domain-like	Nqo1 FMN-binding domain-like
e8bpxF3	F:297-382	beta-Grasp	Ubiquitin-related	Nqo1 middle domain-like
e8bpxF2	F:383-484	Bromodomain-like	Nqo1C-terminal domain-like	Nqo1C-terminal domain-like
e8bpxG5	G:57-146	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e8bpxG4	G:147-201	iron-sulfur center-binding helical hairpin	iron-sulfur center-binding helical hairpin	iron-sulfur center-binding helical hairpin
e8bpxG1	G:202-282	4Fe-4S ferredoxin	4Fe-4S ferredoxin	4Fe-4S ferredoxin
e8bpxG3	G:283-342	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1	Formate dehydrogenase/DMSO reductase, domain 1
e8bpxG2	G:343-412,G:556-743	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e8bpxG6	G:413-555	Rossmann-like	Formate dehydrogenase/DMSO reductase, domains 2 and 3	Formate dehydrogenase/DMSO reductase, domains 2 and 3
e8bpxH1	H:2-325	Sodium/proton antiporter subunits-like	Sodium/proton antiporter subunits-like	NADH-quinone oxidoreductase subunit 8 (Nqo8)-related
e8bpxI1	I:58-222	4Fe-4S ferredoxin	4Fe-4S ferredoxin	4Fe-4S ferredoxin
e8bpxj1	j:9-59	Mitochondrial complex I, AGGG subunit	Mitochondrial complex I, AGGG subunit	Mitochondrial complex I, AGGG subunit
e8bpxK1	K:1-100	NADH-quinone oxidoreductase subunit K	NADH-quinone oxidoreductase subunit K	NADH-quinone oxidoreductase subunit K
e8bpxM1	M:2-495	Sodium/proton antiporter subunits-like	Sodium/proton antiporter subunits-like	NADH-quinone oxidoreductase subunit L (NuoL)-related
e8bpxN1	N:12-499	Sodium/proton antiporter subunits-like	Sodium/proton antiporter subunits-like	NADH-quinone oxidoreductase subunit L (NuoL)-related
e8bpxO1	O:37-159	beta-Grasp	Ubiquitin-related	Ubiquitin-like
e8bpxP1	P:67-382	Rossmann-like	Rossmann-related	NAD(P)-binding Rossmann-fold domains
e8bpxq1	q:31-110	Mitochondrial complex I, B17.2 subunit	Mitochondrial complex I, B17.2 subunit	Mitochondrial complex I, B17.2 subunit
e8bpxQ1	Q:47-151	Putative oxidoreductase	Putative oxidoreductase	Putative oxidoreductase
e8bpxR1	R:37-109	Rubredoxin-like	Rubredoxin-related	Cytochrome c oxidase Subunit F
e8bpxS1	S:2-94	Thioredoxin-like	Thioredoxin-like	Thioredoxin-like
e8bpxT1	T:39-121	ACP-like	Acyl-carrier protein (ACP)	Acyl-carrier protein (ACP)
e8bpxU1	U:40-126	ACP-like	Acyl-carrier protein (ACP)	Acyl-carrier protein (ACP)
e8bpxW1	W:10-133	LYR protein	LYR protein	LYR protein
e8bpxx1	x:44-232	Single-stranded left-handed beta-helix	Trimeric LpxA-like enzymes	Trimeric LpxA-like enzymes
e8bpxX1	X:9-62	p8-MTCP1-related	p8-MTCP1-related	p8-MTCP1-related
e8bpxX2	X:63-106	p8-MTCP1-related	p8-MTCP1-related	p8-MTCP1-related
e8bpxZ1	Z:19-143	Mitochondrial complex I, B16.6 subunit	Mitochondrial complex I, B16.6 subunit	Mitochondrial complex I, B16.6 subunit