Citrus Sinensis ID: 002602
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 902 | 2.2.26 [Sep-21-2011] | |||||||
| Q4U2R1 | 4836 | E3 ubiquitin-protein liga | yes | no | 0.396 | 0.074 | 0.317 | 8e-47 | |
| O95714 | 4834 | E3 ubiquitin-protein liga | yes | no | 0.396 | 0.074 | 0.314 | 1e-46 | |
| Q9FN03 | 440 | Ultraviolet-B receptor UV | no | no | 0.365 | 0.75 | 0.318 | 7e-45 | |
| Q15751 | 4861 | Probable E3 ubiquitin-pro | no | no | 0.393 | 0.073 | 0.321 | 8e-45 | |
| Q9VR91 | 4912 | Probable E3 ubiquitin-pro | yes | no | 0.392 | 0.072 | 0.317 | 6e-43 | |
| Q6PAV2 | 1057 | Probable E3 ubiquitin-pro | no | no | 0.361 | 0.308 | 0.312 | 3e-38 | |
| Q5GLZ8 | 1057 | Probable E3 ubiquitin-pro | no | no | 0.362 | 0.309 | 0.308 | 3e-38 | |
| Q5PQN1 | 1057 | Probable E3 ubiquitin-pro | no | no | 0.362 | 0.309 | 0.308 | 1e-37 | |
| Q15034 | 1050 | Probable E3 ubiquitin-pro | no | no | 0.337 | 0.289 | 0.324 | 5e-35 | |
| F2Z461 | 1003 | E3 ISG15--protein ligase | no | no | 0.350 | 0.315 | 0.308 | 2e-32 |
| >sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3 | Back alignment and function desciption |
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Score = 189 bits (480), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 207/388 (53%), Gaps = 30/388 (7%)
Query: 255 VFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQ 314
VF+WG + L G + G +I +P E+ L+ +A GSK VT +
Sbjct: 2962 VFVWGLNDKDQL--GGLKGSKIK--------VPSFSETLSALNVVQVAGGSKSLFAVTVE 3011
Query: 315 GQIFSWGEGSGGKLGHGVEA-DVSYPKLIDALNGSNIHMVAC--GEFHTCAVTLSGDLYT 371
G+++S GE + G+LG G+ + V P+ I AL+ + VA G H A+T+ G +++
Sbjct: 3012 GKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFS 3071
Query: 372 WGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGT 431
WG+G + G LG S ++ PR + ++ +I I CG H+AA+TS+G+L+T+G G
Sbjct: 3072 WGEG--DDGKLGHFSRMNCDKPRLIEA-LKTKRIRDIACGSSHSAALTSSGELYTWGLGE 3128
Query: 432 FGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKL-FT 490
+G LGHGD ++ P+ V+ L + + +CG + + + L+ + L F+
Sbjct: 3129 YGRLGHGDNTTQLKPKMVKVLLGHRVIQVACG-----------SRDAQTLALTDEGLVFS 3177
Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
WGDG G+LG G +E +P ++ + C++ CG ++ALT +G V++ G DY +
Sbjct: 3178 WGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFR 3237
Query: 551 LGSPGSTG-KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNE 609
LG + P +EG ++ + I +A G+ H V+ +VY WG +GQ G+G
Sbjct: 3238 LGHGSDVHVRKPQVVEG-LRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTT 3296
Query: 610 NKQTPTLVEALRDKQVKSVVCGSNFTAA 637
+ PTLV+ L +++ V CGS+ + A
Sbjct: 3297 VNRKPTLVQGLEGQKITRVACGSSHSVA 3324
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E3 ubiquitin-protein ligase that regulates ubiquitin-dependent retention of repair proteins on damaged chromosomes. Recruited to sites of DNA damage in response to ionizing radiation (IR) and facilitates the assembly of UBE2N and RNF8 promoting DNA damage-induced formation of 'Lys-63'-linked ubiquitin chains. Acts as a mediator of binding specificity between UBE2N and RNF8. Involved in the maintenance of RNF168 levels. E3 ubiquitin-protein ligase that promotes the ubiquitination and proteasomal degradation of XPA which influences the circadian oscillation of DNA excision repair activity. Mus musculus (taxid: 10090) EC: 6EC: .EC: 3EC: .EC: 2EC: .EC: - |
| >sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster GN=HERC2 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus GN=Herc4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3 PE=1 SV=1 | Back alignment and function description |
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| >sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 902 | ||||||
| 255540989 | 1028 | Ran GTPase binding protein, putative [Ri | 0.975 | 0.856 | 0.610 | 0.0 | |
| 359473366 | 1047 | PREDICTED: uncharacterized protein LOC10 | 0.981 | 0.845 | 0.616 | 0.0 | |
| 359479203 | 1107 | PREDICTED: uncharacterized protein LOC10 | 0.978 | 0.797 | 0.575 | 0.0 | |
| 449442447 | 982 | PREDICTED: LOW QUALITY PROTEIN: uncharac | 0.931 | 0.855 | 0.584 | 0.0 | |
| 255562792 | 1042 | Ran GTPase binding protein, putative [Ri | 0.980 | 0.848 | 0.579 | 0.0 | |
| 255572207 | 1100 | Ran GTPase binding protein, putative [Ri | 0.978 | 0.802 | 0.568 | 0.0 | |
| 356567509 | 1106 | PREDICTED: uncharacterized protein LOC10 | 0.977 | 0.797 | 0.563 | 0.0 | |
| 224105957 | 1104 | predicted protein [Populus trichocarpa] | 0.978 | 0.799 | 0.563 | 0.0 | |
| 357493985 | 1124 | Lateral signaling target protein-like pr | 0.964 | 0.774 | 0.551 | 0.0 | |
| 356526924 | 1099 | PREDICTED: uncharacterized protein LOC10 | 0.977 | 0.802 | 0.563 | 0.0 |
| >gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis] gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/904 (61%), Positives = 681/904 (75%), Gaps = 24/904 (2%)
Query: 12 RDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRIIP 71
RD QA+ +KKG YLLKYGR GKPKFCPFRLS+DE+ LIWYAGK EKQLKLSHVS+I+P
Sbjct: 13 RDILQAITAIKKGAYLLKYGRWGKPKFCPFRLSNDERFLIWYAGKLEKQLKLSHVSKIMP 72
Query: 72 GQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALISEDNRCKSRS 131
GQ TA+FQRYPQPEKEYQSFSLIY NRSLD+ICKDK EAE+W ALRALIS+++ CK
Sbjct: 73 GQHTAIFQRYPQPEKEYQSFSLIYSNRSLDVICKDKVEAEVWIVALRALISQNSCCKRIG 132
Query: 132 DSIS-SDSPRSHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGKAFSEVLS 190
D S ++SPRSH +K+S S+VS SSD+ KD DT PILV YE SPQNRLGKAFSEVLS
Sbjct: 133 DPQSDANSPRSHARKSSLSNVSCTSSDIIYKDPEDTHPILVPYETSPQNRLGKAFSEVLS 192
Query: 191 FTAAAKAYTRAESVSKSLNFVASGGLDDANSRSSTADSFRISLSSAVSSSSQGSCHEDFD 250
FTAAAKAYT+AESV++SL+ ++SG DDANS SS D+FR S SSAVSSS S HED D
Sbjct: 193 FTAAAKAYTQAESVARSLSNLSSGISDDANSHSSAVDAFRNSSSSAVSSSGYVSSHEDVD 252
Query: 251 GLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVL 310
G GDV GEG+ N LGG + V+ S R DALLPK L+ LDAQ IACGSKHAV+
Sbjct: 253 GPGDVLFLGEGISNLPLGGNMYDVKSSPIMRMDALLPKALDRIAALDAQIIACGSKHAVI 312
Query: 311 VTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLY 370
VTKQGQIFSWGE SGGKLGHG +ADVS PK+IDAL+ SN+ +VACGEFHTCAVT+SG+LY
Sbjct: 313 VTKQGQIFSWGESSGGKLGHGADADVSQPKVIDALSESNVVLVACGEFHTCAVTVSGNLY 372
Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
TWGD HN G LG S +SHWIPR+V GQ+E ++IS + CGPWHTAA++S GKLFTFGDG
Sbjct: 373 TWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCGPWHTAAVSSQGKLFTFGDG 432
Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNGLSSKKLFT 490
TFGALGHGDRSSTS PREVE+LK L+T+ SCG+WHTAA+++ ++ + S KLFT
Sbjct: 433 TFGALGHGDRSSTSKPREVESLKGLRTLKVSCGIWHTAAVIDFINESDRLDTSLSGKLFT 492
Query: 491 WGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADYGQ 550
WG G GQLGHGD EPR+VP CV + + C+VAC HS+TIALT GQV++MG+ADYGQ
Sbjct: 493 WGAGERGQLGHGDEEPRLVPSCVSMPAGV--CQVACAHSMTIALTVLGQVYTMGAADYGQ 550
Query: 551 LGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNEN 610
LGSP S GK P +G+I++ +I+ IACGS+H+ +SS +VYTWGKG NGQLGHGD ++
Sbjct: 551 LGSPCSVGKLPIHTDGDIRNCHIKQIACGSHHVVALSSNGDVYTWGKGINGQLGHGDIKD 610
Query: 611 KQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCRNQFNFRRRRHNCYN 670
+ TPTLV+AL+ KQVKSVVCGSNFTA IC HK VS AD SICSGC N FNFRR+RHNCYN
Sbjct: 611 RHTPTLVKALKHKQVKSVVCGSNFTAVICPHKCVSSADQSICSGCHNPFNFRRKRHNCYN 670
Query: 671 CGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSESGSNSQIPRNSSG-LFQN 729
CGL++CK CSSK+S+K ALAP +NKP RVCD+CF KL T E G Q+P++ G L N
Sbjct: 671 CGLLFCKACSSKRSLKAALAPNVNKPSRVCDECFAKLTTAMEDGPKLQVPKSCRGSLHYN 730
Query: 730 CKRVTEKENMNS-------------------RSATDGQSKPKGKSYHASPSLNGKFQWEP 770
CK + E E++ S R + K + H SP+ G +WE
Sbjct: 731 CKEIAEAESITSNPSHQHCRLSSLDSFKQALRQNSQHNKKAESCQCHVSPTQIGSLEWEL 790
Query: 771 NSDFIKSNKISASPPGSRRVSRAPSPISRKSSPACSI-TMNSFTDLANSEVIFEYSKQTN 829
++ ++SAS PGS +SRA SP+SR+SS S+ + +SF + A++E++ + SKQ N
Sbjct: 791 TYEYEDLGEMSASDPGSGMLSRATSPVSRRSSQEHSLRSASSFNNFAHAELLPDNSKQRN 850
Query: 830 DNFNQEPDVLRAQLEDLTRKSQFLEVELERTSRKLKETTQIAQEEAEKNKAAQEVIRSLT 889
++ +QE +LR Q+ DLT +S+ LE +++RTSR+LKE T+ ++E+EKNK A+E+IRSLT
Sbjct: 851 ESLSQEILLLRGQVPDLTHRSRVLEADIDRTSRQLKEATETVKKESEKNKVAKEIIRSLT 910
Query: 890 AQAR 893
AQ +
Sbjct: 911 AQLK 914
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101222790 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis] gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis] gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max] | Back alignment and taxonomy information |
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| >gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa] gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula] gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 902 | ||||||
| TAIR|locus:505006603 | 1075 | AT5G12350 "AT5G12350" [Arabido | 0.886 | 0.744 | 0.507 | 1.5e-223 | |
| TAIR|locus:2079147 | 954 | AT3G47660 "AT3G47660" [Arabido | 0.851 | 0.805 | 0.503 | 2.3e-216 | |
| TAIR|locus:2025277 | 1103 | PRAF1 "AT1G76950" [Arabidopsis | 0.926 | 0.757 | 0.447 | 4.6e-209 | |
| TAIR|locus:2165770 | 1073 | AT5G42140 "AT5G42140" [Arabido | 0.771 | 0.648 | 0.463 | 6.9e-206 | |
| TAIR|locus:2086253 | 1045 | AT3G23270 "AT3G23270" [Arabido | 0.521 | 0.449 | 0.554 | 3.2e-194 | |
| TAIR|locus:2009739 | 1006 | AT1G65920 [Arabidopsis thalian | 0.634 | 0.568 | 0.413 | 9.1e-154 | |
| TAIR|locus:2163986 | 440 | UVR8 "UVB-RESISTANCE 8" [Arabi | 0.364 | 0.747 | 0.325 | 3.5e-47 | |
| UNIPROTKB|E1BW48 | 4841 | HERC2 "Uncharacterized protein | 0.374 | 0.069 | 0.325 | 2.4e-43 | |
| UNIPROTKB|E1C8K2 | 4841 | HERC2 "Uncharacterized protein | 0.374 | 0.069 | 0.325 | 2.4e-43 | |
| RGD|1307989 | 3607 | Herc2 "HECT and RLD domain con | 0.374 | 0.093 | 0.325 | 9.6e-42 |
| TAIR|locus:505006603 AT5G12350 "AT5G12350" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2158 (764.7 bits), Expect = 1.5e-223, P = 1.5e-223
Identities = 418/823 (50%), Positives = 558/823 (67%)
Query: 10 VERDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKEEKQLKLSHVSRI 69
VERD EQA+ LKKG YLLKYGRRGKPKFCPFRLS+DE +LIW++G EEK LKLSHVSRI
Sbjct: 17 VERDIEQAIIALKKGAYLLKYGRRGKPKFCPFRLSNDETVLIWFSGNEEKHLKLSHVSRI 76
Query: 70 IPGQRTAVFQRYPQPEKEYQSFSLIYRNRSLDLICKDKDEAELWFTALRALIS---EDNR 126
I GQRT +FQRYP+PEKEYQSFSLIY RSLD+ICKDKDEAE+WFT L+ALIS + NR
Sbjct: 77 ISGQRTPIFQRYPRPEKEYQSFSLIYSERSLDVICKDKDEAEVWFTGLKALISHCHQRNR 136
Query: 127 ---CKXXXXXXXXXXXXXHTQKNSPSHVSSISSDLTNKDSGDTQPILVAYENSPQNRLGK 183
+ +T+++SP H S+D KD + I +E+ P+N L K
Sbjct: 137 RTESRSDGTPSEANSPRTYTRRSSPLHSPFSSNDSLQKDGSNHLRIHSPFESPPKNGLDK 196
Query: 184 AFSEVLSFTAAAKAYTRAESVSKSLNFVASGGLDDANS--RSSTADXXXXXXXXXXXXXX 241
AFS++ + K + ++S + S++ SGG D + R D
Sbjct: 197 AFSDMALYAVPPKGFYPSDSATISVH---SGGSDSMHGHMRGMGMDAFRVSMSSAVSSSS 253
Query: 242 XXXCHEDFDGLGDVFIWXXXXXXXXXXXXXXXXXISSADRRDALLPKVLESTVVLDAQSI 301
H+D D LGDVFIW S + D+LLPK LEST+VLD Q+I
Sbjct: 254 HGSGHDDGDALGDVFIWGEGIGEGVLGGGNRRVGSSFDIKMDSLLPKALESTIVLDVQNI 313
Query: 302 ACGSKHAVLVTKQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTC 361
ACG +HAVLVTKQG+ FSWGE S G+LGHGV++++ PKLIDALN +NI +VACGEFH+C
Sbjct: 314 ACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHSC 373
Query: 362 AVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSA 421
AVTLSGDLYTWG G + G+LG +E+SHW+P++V+ +EG+ +SSI CGP+HTA +TSA
Sbjct: 374 AVTLSGDLYTWGKG--DFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSA 431
Query: 422 GKLFTFGDGTFGALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSN 481
G+LFTFGDGTFG LGHGD+ S +PREV++LK L+TV A+CGVWHTAA+VEV +S S+
Sbjct: 432 GQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 491
Query: 482 GLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVF 541
SS KLFTWGDG +G+LGHG+ EP++VP CV + +FC+VACGHS+T+ALT +G V+
Sbjct: 492 NCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVY 551
Query: 542 SMGSADYGQLGSPGSTGKFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANG 601
+MGS YGQLG+ + GK P R+EG + ++E+IACG+YH+AV++S++EVYTWGKG+NG
Sbjct: 552 TMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNG 611
Query: 602 QLGHGDNENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHKGVSIADHSICSGCXXXXXX 661
+LGHGD +++ +PTLVE+L+DKQVKS+ CG+NFTAA+C+H+ S D S+CSGC
Sbjct: 612 RLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWASGMDQSMCSGCRQPFSF 671
Query: 662 XXXXHNCYNCGLVYCKLCSSKKSMKTALAPEINKPYRVCDDCFIKLNTTSES--GSNSQI 719
HNCYNCGLV+C C+SKKS+K +AP NKPYRVCD CF KL T E+ S+S +
Sbjct: 672 KRKRHNCYNCGLVFCHSCTSKKSLKACMAPNPNKPYRVCDKCFNKLKKTMETDPSSHSSL 731
Query: 720 PRNSSGLFQNCKRVTEKENMNSRSATDGQSKPKGKSYHASPSLNGKFQWEPNSDFIKSNK 779
R S + Q + + + +SRS DGQ + + ++ + + +F S++
Sbjct: 732 SRRGS-INQGSDPIDKDDKFDSRS--DGQLA-RFSLMESMRQVDSRHKKNKKYEF-NSSR 786
Query: 780 ISASPPGSRRVSRAPSPISRKSSPACSITMNSFT-DLANSEVI 821
+S P GS + R I++ +P + F+ + S ++
Sbjct: 787 VSPIPSGSSQ--RGALNIAKSFNPVFGASKKFFSASVPGSRIV 827
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| TAIR|locus:2079147 AT3G47660 "AT3G47660" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2025277 PRAF1 "AT1G76950" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2165770 AT5G42140 "AT5G42140" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2086253 AT3G23270 "AT3G23270" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2009739 AT1G65920 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2163986 UVR8 "UVB-RESISTANCE 8" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1BW48 HERC2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E1C8K2 HERC2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
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| RGD|1307989 Herc2 "HECT and RLD domain containing E3 ubiquitin protein ligase 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00036997001 | SubName- Full=Chromosome chr1 scaffold_84, whole genome shotgun sequence; (1052 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 902 | |||
| cd13365 | 115 | cd13365, PH_PLC_plant-like, Plant-like Phospholipa | 2e-51 | |
| COG5184 | 476 | COG5184, ATS1, Alpha-tubulin suppressor and relate | 5e-31 | |
| COG5184 | 476 | COG5184, ATS1, Alpha-tubulin suppressor and relate | 2e-27 | |
| cd01248 | 108 | cd01248, PH_PLC_ELMO1, Phospholipase C and Engulfm | 1e-26 | |
| COG5184 | 476 | COG5184, ATS1, Alpha-tubulin suppressor and relate | 2e-24 | |
| pfam01363 | 68 | pfam01363, FYVE, FYVE zinc finger | 9e-20 | |
| smart00064 | 68 | smart00064, FYVE, Protein present in Fab1, YOTB, V | 6e-18 | |
| cd00065 | 57 | cd00065, FYVE, FYVE domain; Zinc-binding domain; t | 8e-18 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 6e-16 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 1e-12 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 1e-12 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 5e-11 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 6e-09 | |
| pfam00415 | 50 | pfam00415, RCC1, Regulator of chromosome condensat | 8e-08 | |
| cd13363 | 117 | cd13363, PH_PLC_delta, Phospholipase C-delta (PLC- | 2e-07 | |
| cd13364 | 108 | cd13364, PH_PLC_eta, Phospholipase C-eta (PLC-eta) | 2e-06 | |
| pfam12718 | 143 | pfam12718, Tropomyosin_1, Tropomyosin like | 7e-06 | |
| pfam13540 | 30 | pfam13540, RCC1_2, Regulator of chromosome condens | 4e-05 | |
| pfam13540 | 30 | pfam13540, RCC1_2, Regulator of chromosome condens | 6e-05 | |
| smart00233 | 102 | smart00233, PH, Pleckstrin homology domain | 9e-05 | |
| pfam13540 | 30 | pfam13540, RCC1_2, Regulator of chromosome condens | 3e-04 | |
| pfam13540 | 30 | pfam13540, RCC1_2, Regulator of chromosome condens | 0.001 | |
| pfam13713 | 39 | pfam13713, BRX_N, Transcription factor BRX N-termi | 0.001 | |
| pfam12718 | 143 | pfam12718, Tropomyosin_1, Tropomyosin like | 0.003 | |
| pfam00261 | 237 | pfam00261, Tropomyosin, Tropomyosin | 0.004 |
| >gnl|CDD|241519 cd13365, PH_PLC_plant-like, Plant-like Phospholipase C (PLC) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
Score = 175 bits (446), Expect = 2e-51
Identities = 70/115 (60%), Positives = 84/115 (73%), Gaps = 4/115 (3%)
Query: 12 RDTEQAVRVLKKGTYLLKYGRRGKPKFCPFRLSSDEKLLIWYAGKE--EKQLKLSHVSRI 69
RD E+A+ LK G+ LLKYGRRGKP F FRLS DE L W + K+ EK+++LS VSRI
Sbjct: 1 RDVEEAITQLKIGSNLLKYGRRGKPHFRYFRLSPDELTLYWSSPKKGSEKRVRLSSVSRI 60
Query: 70 IPGQRTAVFQRYPQPEKEYQSFSLIYRN--RSLDLICKDKDEAELWFTALRALIS 122
IPGQRT VF+R P P E QSFS+IY + RSLDL CKD+ E + WFT LRAL+S
Sbjct: 61 IPGQRTVVFERPPPPGLEEQSFSIIYADGERSLDLTCKDRQEFDTWFTGLRALLS 115
|
PLC-gamma (PLCgamma) was the second class of PLC discovered. PLC-gamma consists of an N-terminal PH domain, a EF hand domain, a catalytic domain split into X and Y halves internal to which is a PH domain split by two SH2 domains and a single SH3 domain, and a C-terminal C2 domain. PLCs (EC 3.1.4.3) play a role in the initiation of cellular activation, proliferation, differentiation and apoptosis. They are central to inositol lipid signalling pathways, facilitating intracellular Ca2+ release and protein kinase C (PKC) activation. Specificaly, PLCs catalyze the cleavage of phosphatidylinositol-4,5-bisphosphate (PIP2) and result in the release of 1,2-diacylglycerol (DAG) and inositol 1,4,5-triphosphate (IP3). These products trigger the activation of protein kinase C (PKC) and the release of Ca2+ from intracellular stores. There are fourteen kinds of mammalian phospholipase C proteins which are are classified into six isotypes (beta, gamma, delta, epsilon, zeta, eta). This cd contains PLC members from fungi and plants. PH domains have diverse functions, but in general are involved in targeting proteins to the appropriate cellular location or in the interaction with a binding partner. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. Less than 10% of PH domains bind phosphoinositide phosphates (PIPs) with high affinity and specificity. PH domains are distinguished from other PIP-binding domains by their specific high-affinity binding to PIPs with two vicinal phosphate groups: PtdIns(3,4)P2, PtdIns(4,5)P2 or PtdIns(3,4,5)P3 which results in targeting some PH domain proteins to the plasma membrane. A few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes. Length = 115 |
| >gnl|CDD|227511 COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|227511 COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|241279 cd01248, PH_PLC_ELMO1, Phospholipase C and Engulfment and cell motility protein 1 pleckstrin homology domain | Back alignment and domain information |
|---|
| >gnl|CDD|227511 COG5184, ATS1, Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|216454 pfam01363, FYVE, FYVE zinc finger | Back alignment and domain information |
|---|
| >gnl|CDD|214499 smart00064, FYVE, Protein present in Fab1, YOTB, Vac1, and EEA1 | Back alignment and domain information |
|---|
| >gnl|CDD|238022 cd00065, FYVE, FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1; | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|201217 pfam00415, RCC1, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|241517 cd13363, PH_PLC_delta, Phospholipase C-delta (PLC-delta) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|241518 cd13364, PH_PLC_eta, Phospholipase C-eta (PLC-eta) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >gnl|CDD|205039 pfam12718, Tropomyosin_1, Tropomyosin like | Back alignment and domain information |
|---|
| >gnl|CDD|205718 pfam13540, RCC1_2, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|205718 pfam13540, RCC1_2, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|214574 smart00233, PH, Pleckstrin homology domain | Back alignment and domain information |
|---|
| >gnl|CDD|205718 pfam13540, RCC1_2, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|205718 pfam13540, RCC1_2, Regulator of chromosome condensation (RCC1) repeat | Back alignment and domain information |
|---|
| >gnl|CDD|205888 pfam13713, BRX_N, Transcription factor BRX N-terminal domain | Back alignment and domain information |
|---|
| >gnl|CDD|205039 pfam12718, Tropomyosin_1, Tropomyosin like | Back alignment and domain information |
|---|
| >gnl|CDD|189476 pfam00261, Tropomyosin, Tropomyosin | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 902 | |||
| COG5184 | 476 | ATS1 Alpha-tubulin suppressor and related RCC1 dom | 100.0 | |
| COG5184 | 476 | ATS1 Alpha-tubulin suppressor and related RCC1 dom | 100.0 | |
| KOG1427 | 443 | consensus Uncharacterized conserved protein, conta | 100.0 | |
| KOG1427 | 443 | consensus Uncharacterized conserved protein, conta | 100.0 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 99.93 | |
| KOG0783 | 1267 | consensus Uncharacterized conserved protein, conta | 99.93 | |
| KOG1428 | 3738 | consensus Inhibitor of type V adenylyl cyclases/Ne | 99.85 | |
| cd01248 | 115 | PH_PLC Phospholipase C (PLC) pleckstrin homology ( | 99.82 | |
| KOG1428 | 3738 | consensus Inhibitor of type V adenylyl cyclases/Ne | 99.79 | |
| PF12814 | 123 | Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin | 99.72 | |
| KOG0169 | 746 | consensus Phosphoinositide-specific phospholipase | 99.23 | |
| KOG1264 | 1267 | consensus Phospholipase C [Lipid transport and met | 99.17 | |
| PF00415 | 51 | RCC1: Regulator of chromosome condensation (RCC1) | 99.16 | |
| PF01363 | 69 | FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc f | 99.13 | |
| KOG0941 | 850 | consensus E3 ubiquitin protein ligase [Posttransla | 99.04 | |
| PF00415 | 51 | RCC1: Regulator of chromosome condensation (RCC1) | 99.02 | |
| KOG1818 | 634 | consensus Membrane trafficking and cell signaling | 99.01 | |
| smart00064 | 68 | FYVE Protein present in Fab1, YOTB, Vac1, and EEA1 | 98.96 | |
| KOG0941 | 850 | consensus E3 ubiquitin protein ligase [Posttransla | 98.85 | |
| PTZ00303 | 1374 | phosphatidylinositol kinase; Provisional | 98.77 | |
| KOG1729 | 288 | consensus FYVE finger containing protein [General | 98.77 | |
| PF13713 | 39 | BRX_N: Transcription factor BRX N-terminal domain | 98.76 | |
| PF13540 | 30 | RCC1_2: Regulator of chromosome condensation (RCC1 | 98.75 | |
| KOG1819 | 990 | consensus FYVE finger-containing proteins [General | 98.71 | |
| PF13540 | 30 | RCC1_2: Regulator of chromosome condensation (RCC1 | 98.7 | |
| cd00065 | 57 | FYVE FYVE domain; Zinc-binding domain; targets pro | 98.59 | |
| KOG2999 | 713 | consensus Regulator of Rac1, required for phagocyt | 98.33 | |
| cd01244 | 98 | PH_RasGAP_CG9209 RAS_GTPase activating protein (GA | 98.12 | |
| cd01235 | 101 | PH_SETbf Set binding factor Pleckstrin Homology (P | 97.73 | |
| KOG1409 | 404 | consensus Uncharacterized conserved protein, conta | 97.71 | |
| cd01238 | 106 | PH_Tec Tec pleckstrin homology (PH) domain. Tec pl | 97.69 | |
| KOG1842 | 505 | consensus FYVE finger-containing protein [General | 97.61 | |
| cd01264 | 101 | PH_melted Melted pleckstrin homology (PH) domain. | 97.57 | |
| cd01233 | 100 | Unc104 Unc-104 pleckstrin homology (PH) domain. Un | 97.55 | |
| cd01265 | 95 | PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain | 97.53 | |
| cd01236 | 104 | PH_outspread Outspread Pleckstrin homology (PH) do | 97.52 | |
| PF00169 | 104 | PH: PH domain; InterPro: IPR001849 The pleckstrin | 97.41 | |
| smart00233 | 102 | PH Pleckstrin homology domain. Domain commonly fou | 97.38 | |
| cd01266 | 108 | PH_Gab Gab (Grb2-associated binder) pleckstrin hom | 97.29 | |
| KOG1841 | 1287 | consensus Smad anchor for receptor activation [Def | 97.29 | |
| KOG1843 | 473 | consensus Uncharacterized conserved protein [Funct | 97.26 | |
| cd01220 | 99 | PH_CDEP Chondrocyte-derived ezrin-like domain cont | 97.24 | |
| cd01251 | 103 | PH_centaurin_alpha Centaurin alpha Pleckstrin homo | 97.16 | |
| cd01219 | 101 | PH_FGD FGD (faciogenital dysplasia protein) plecks | 97.04 | |
| cd01256 | 110 | PH_dynamin Dynamin pleckstrin homology (PH) domain | 96.86 | |
| cd01247 | 91 | PH_GPBP Goodpasture antigen binding protein (GPBP) | 96.81 | |
| cd00821 | 96 | PH Pleckstrin homology (PH) domain. Pleckstrin hom | 96.74 | |
| cd01246 | 91 | PH_oxysterol_bp Oxysterol binding protein (OSBP) P | 96.52 | |
| cd01250 | 94 | PH_centaurin Centaurin Pleckstrin homology (PH) do | 96.36 | |
| cd01260 | 96 | PH_CNK Connector enhancer of KSR (Kinase suppresso | 96.34 | |
| cd01257 | 101 | PH_IRS Insulin receptor substrate (IRS) pleckstrin | 96.22 | |
| cd00900 | 99 | PH-like Pleckstrin homology-like domain. Pleckstri | 96.06 | |
| PF15409 | 89 | PH_8: Pleckstrin homology domain | 95.94 | |
| cd01218 | 104 | PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain | 95.91 | |
| cd01252 | 125 | PH_cytohesin Cytohesin Pleckstrin homology (PH) do | 95.79 | |
| KOG2059 | 800 | consensus Ras GTPase-activating protein [Signal tr | 95.72 | |
| cd01261 | 112 | PH_SOS Son of Sevenless (SOS) Pleckstrin homology | 95.34 | |
| KOG4424 | 623 | consensus Predicted Rho/Rac guanine nucleotide exc | 95.15 | |
| cd01245 | 98 | PH_RasGAP_CG5898 RAS GTPase-activating protein (GA | 94.79 | |
| cd01241 | 102 | PH_Akt Akt pleckstrin homology (PH) domain. Akt pl | 94.74 | |
| KOG1811 | 1141 | consensus Predicted Zn2+-binding protein, contains | 94.51 | |
| PF15413 | 112 | PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FE | 94.17 | |
| PF11725 | 1774 | AvrE: Pathogenicity factor; InterPro: IPR021085 Th | 94.05 | |
| cd01254 | 121 | PH_PLD Phospholipase D (PLD) pleckstrin homology ( | 93.23 | |
| KOG1265 | 1189 | consensus Phospholipase C [Lipid transport and met | 93.1 | |
| PF08458 | 110 | PH_2: Plant pleckstrin homology-like region; Inter | 92.67 | |
| cd01222 | 97 | PH_clg Clg (common-site lymphoma/leukemia guanine | 92.0 | |
| KOG4693 | 392 | consensus Uncharacterized conserved protein, conta | 91.43 | |
| KOG0943 | 3015 | consensus Predicted ubiquitin-protein ligase/hyper | 91.39 | |
| PF02318 | 118 | FYVE_2: FYVE-type zinc finger; InterPro: IPR003315 | 91.3 | |
| cd01232 | 114 | PH_TRIO Trio pleckstrin homology (PH) domain. Trio | 89.06 | |
| PF03904 | 230 | DUF334: Domain of unknown function (DUF334); Inter | 88.86 | |
| PRK15396 | 78 | murein lipoprotein; Provisional | 86.76 | |
| KOG3669 | 705 | consensus Uncharacterized conserved protein, conta | 86.5 | |
| KOG0230 | 1598 | consensus Phosphatidylinositol-4-phosphate 5-kinas | 86.36 | |
| cd01253 | 104 | PH_beta_spectrin Beta-spectrin pleckstrin homology | 86.3 | |
| PHA01750 | 75 | hypothetical protein | 86.04 | |
| COG3074 | 79 | Uncharacterized protein conserved in bacteria [Fun | 85.99 | |
| TIGR02449 | 65 | conserved hypothetical protein TIGR02449. Members | 83.75 | |
| cd01242 | 112 | PH_ROK Rok (Rho- associated kinase) pleckstrin hom | 83.35 | |
| cd01228 | 96 | PH_BCR-related BCR (breakpoint cluster region)-rel | 82.98 | |
| KOG3669 | 705 | consensus Uncharacterized conserved protein, conta | 82.3 | |
| KOG2391 | 365 | consensus Vacuolar sorting protein/ubiquitin recep | 81.91 | |
| cd01237 | 106 | Unc112 Unc-112 pleckstrin homology (PH) domain. Un | 81.65 | |
| KOG4693 | 392 | consensus Uncharacterized conserved protein, conta | 81.29 | |
| cd01240 | 116 | PH_beta-ARK Beta adrenergic receptor kinase 1(beta | 80.4 | |
| PRK14161 | 178 | heat shock protein GrpE; Provisional | 80.24 | |
| PF02183 | 45 | HALZ: Homeobox associated leucine zipper; InterPro | 80.21 | |
| PF04728 | 56 | LPP: Lipoprotein leucine-zipper; InterPro: IPR0068 | 80.03 |
| >COG5184 ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-46 Score=410.94 Aligned_cols=364 Identities=26% Similarity=0.467 Sum_probs=296.2
Q ss_pred eeccCCcEEEEcCCCCCCccCCCCCCccccccCccCccCceEeccc--CCCCeEEEEecCCEEEEEEcCCcEEEEeCCCC
Q 002602 248 DFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLEST--VVLDAQSIACGSKHAVLVTKQGQIFSWGEGSG 325 (902)
Q Consensus 248 ~l~~~G~Vy~WG~n~~~GqLG~g~~~~~~~~~~~~~~~~P~~l~~~--~~~~I~~Ia~G~~hs~~Lt~dG~Vy~wG~N~~ 325 (902)
....-.+||+||.|. .++||.|.+. .....|...... ....|++++||..|+++|+.||.||+||.|..
T Consensus 63 ~~~~~~~v~~~Gsn~-~~eLGlg~de--------~~~~~P~~~~~~~~d~~~i~~~acGg~hsl~ld~Dg~lyswG~N~~ 133 (476)
T COG5184 63 LLVKMASVYSWGSNG-MNELGLGNDE--------TKVDRPQLNPFGRIDKASIIKIACGGNHSLGLDHDGNLYSWGDNDD 133 (476)
T ss_pred hhhheeeeEEEecCc-ceeeccCCch--------hcccCceecCcccccceeeEEeecCCceEEeecCCCCEEEeccCcc
Confidence 466889999999998 9999999873 335777777665 45789999999999999999999999999999
Q ss_pred CCCCCCCC----------------cccccceEeec----CCCCCEEEEEecCcEEEEEEcCCcEEEEcCCCCCCCCCCCC
Q 002602 326 GKLGHGVE----------------ADVSYPKLIDA----LNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQV 385 (902)
Q Consensus 326 GQLG~g~~----------------~~~~~P~~V~~----l~~~~I~~Va~G~~hs~aLT~dG~Vy~WG~n~~~~GqLG~g 385 (902)
|+||.... .....|..|+. ....+|++++||++++++|+++|+||.||.+ ..+.++.+
T Consensus 134 G~Lgr~~~~~~~~~~~~~~~~~~~~~~~tP~~v~~~s~~~s~~~vv~l~cg~e~svil~~~G~V~~~gt~--r~~e~~~g 211 (476)
T COG5184 134 GALGRDIHKDICDQNNDIIDFDDYELESTPFKVPGGSSAKSHLRVVKLACGWEISVILTADGRVYSWGTF--RCGELGQG 211 (476)
T ss_pred cccccccccccccccccccccchhhcccCCceeeccccccCChheEEeecCCceEEEEccCCcEEEecCc--cccccccc
Confidence 99998661 12467888875 2234799999999999999999999999998 45555555
Q ss_pred C--Ccc----eeeeeeeccCCCCccEEEEeecCCcceeeeeCCeEEEeccCCCCCCCCCCCCCCcccccccccccC-eEE
Q 002602 386 S--EIS----HWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTSVPREVETLKEL-KTV 458 (902)
Q Consensus 386 ~--~~~----~~~P~~v~~~l~~~~I~~VscG~~hs~aLt~~G~Vy~wG~n~~GQLG~g~~~~~~~P~~V~~l~~~-~i~ 458 (902)
. ... .++|..+. ...|+++++|..|.++|+++|++|+||+|.+||||....+....+..+..+... .|.
T Consensus 212 ~~~~s~k~~~~~~p~~v~----~~~i~qla~G~dh~i~lt~~G~vy~~Gs~qkgqlG~~~~e~~~~~~lv~~~f~i~~i~ 287 (476)
T COG5184 212 SYKNSQKTSIQFTPLKVP----KKAIVQLAAGADHLIALTNEGKVYGWGSNQKGQLGRPTSERLKLVVLVGDPFAIRNIK 287 (476)
T ss_pred cccccccceeeeeeeecC----chheeeeccCCceEEEEecCCcEEEecCCcccccCCchhhhcccccccCChhhhhhhh
Confidence 2 222 24555544 457999999999999999999999999999999999877776666666543332 368
Q ss_pred EEEecCceeEEEEeecccccCCcccCCCcEEEecCCCCCCCCCCCC----CCeeeeEEeeecCCCCeEEeecCccEEEEE
Q 002602 459 MASCGVWHTAAIVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDA----EPRVVPLCVKVSDDISFCKVACGHSITIAL 534 (902)
Q Consensus 459 ~VacG~~hs~aLte~~~~~s~~~~~~~G~ly~WG~n~~GQLG~g~~----~~~~~P~~v~~l~~~~I~~Ia~G~~htlaL 534 (902)
.|+||.+|++||. .+|++|+||.|.+||||.+.. .....|.....+.+..|..|++|..|+++|
T Consensus 288 ~vacG~~h~~al~------------~~G~i~a~G~n~fgqlg~~~~~~~~a~~tk~~~~~~~~~~~i~~is~ge~H~l~L 355 (476)
T COG5184 288 YVACGKDHSLALD------------EDGEIYAWGVNIFGQLGAGSDGEIGALTTKPNYKQLLSGVTICSISAGESHSLIL 355 (476)
T ss_pred hcccCcceEEEEc------------CCCeEEEeccchhcccccCcccccceeeccccccccCCCceEEEEecCcceEEEE
Confidence 8999999999998 699999999999999999821 123456666667778899999999999999
Q ss_pred ecCCcEEEEecCCCCCCCCCCCCC---ccceeeecCCCCCCEEEEEecCCEEEEEEcCCcEEEEeCCCCCCcCCCCC-CC
Q 002602 535 TATGQVFSMGSADYGQLGSPGSTG---KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDN-EN 610 (902)
Q Consensus 535 t~~G~Vy~wG~n~~GQLG~~~~~~---~~P~~v~~~l~~~~V~~Ia~G~~hs~aLT~~G~VytWG~n~~GQLG~g~~-~~ 610 (902)
..+|.||+||.+..+|||.+.... ..|+.+. ....+++|+||..|.++.+.+|+||.||.|++|+||.|+. +.
T Consensus 356 ~~~G~l~a~Gr~~~~qlg~~~~~~~~~~~~~~ls---~~~~~~~v~~gt~~~~~~t~~gsvy~wG~ge~gnlG~g~~~~~ 432 (476)
T COG5184 356 RKDGTLYAFGRGDRGQLGIQEEITIDVSTPTKLS---VAIKLEQVACGTHHNIARTDDGSVYSWGWGEHGNLGNGPKEAD 432 (476)
T ss_pred ecCceEEEecCCccccccCcccceeecCCccccc---cccceEEEEecCccceeeccCCceEEecCchhhhccCCchhhh
Confidence 999999999999999999887332 1232222 2357999999999999999999999999999999999985 45
Q ss_pred ceeeEEecc--ccCccEEEEecCCCcceeeeec
Q 002602 611 KQTPTLVEA--LRDKQVKSVVCGSNFTAAICLH 641 (902)
Q Consensus 611 ~~~P~~V~~--l~~~~V~~VacG~~hT~aI~~~ 641 (902)
...|+++.. +.+..++..-||.++++..-.+
T Consensus 433 ~~~pt~i~~~~~~~~~~i~~g~~~~~~v~~~~~ 465 (476)
T COG5184 433 VLVPTLIRQPLLSGHNIILAGYGNQFSVIEETM 465 (476)
T ss_pred ccccccccccccCCCceEEeccCcceEEEecch
Confidence 567888874 6777888888888887766544
|
|
| >COG5184 ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1427 consensus Uncharacterized conserved protein, contains RCC1 domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG1427 consensus Uncharacterized conserved protein, contains RCC1 domain [Function unknown] | Back alignment and domain information |
|---|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
| >KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown] | Back alignment and domain information |
|---|
| >KOG1428 consensus Inhibitor of type V adenylyl cyclases/Neuronal presynaptic protein Highwire/PAM/RPM-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1428 consensus Inhibitor of type V adenylyl cyclases/Neuronal presynaptic protein Highwire/PAM/RPM-1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis | Back alignment and domain information |
|---|
| >KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1264 consensus Phospholipase C [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF00415 RCC1: Regulator of chromosome condensation (RCC1) repeat; InterPro: IPR000408 The regulator of chromosome condensation (RCC1) [] is a eukaryotic protein which binds to chromatin and interacts with ran, a nuclear GTP-binding protein IPR002041 from INTERPRO, to promote the loss of bound GDP and the uptake of fresh GTP, thus acting as a guanine-nucleotide dissociation stimulator (GDS) | Back alignment and domain information |
|---|
| >PF01363 FYVE: FYVE zinc finger; InterPro: IPR000306 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >KOG0941 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF00415 RCC1: Regulator of chromosome condensation (RCC1) repeat; InterPro: IPR000408 The regulator of chromosome condensation (RCC1) [] is a eukaryotic protein which binds to chromatin and interacts with ran, a nuclear GTP-binding protein IPR002041 from INTERPRO, to promote the loss of bound GDP and the uptake of fresh GTP, thus acting as a guanine-nucleotide dissociation stimulator (GDS) | Back alignment and domain information |
|---|
| >KOG1818 consensus Membrane trafficking and cell signaling protein HRS, contains VHS and FYVE domains [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >smart00064 FYVE Protein present in Fab1, YOTB, Vac1, and EEA1 | Back alignment and domain information |
|---|
| >KOG0941 consensus E3 ubiquitin protein ligase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PTZ00303 phosphatidylinositol kinase; Provisional | Back alignment and domain information |
|---|
| >KOG1729 consensus FYVE finger containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF13713 BRX_N: Transcription factor BRX N-terminal domain | Back alignment and domain information |
|---|
| >PF13540 RCC1_2: Regulator of chromosome condensation (RCC1) repeat; PDB: 3QI0_D 1JTD_B 3QHY_B | Back alignment and domain information |
|---|
| >KOG1819 consensus FYVE finger-containing proteins [General function prediction only] | Back alignment and domain information |
|---|
| >PF13540 RCC1_2: Regulator of chromosome condensation (RCC1) repeat; PDB: 3QI0_D 1JTD_B 3QHY_B | Back alignment and domain information |
|---|
| >cd00065 FYVE FYVE domain; Zinc-binding domain; targets proteins to membrane lipids via interaction with phosphatidylinositol-3-phosphate, PI3P; present in Fab1, YOTB, Vac1, and EEA1; | Back alignment and domain information |
|---|
| >KOG2999 consensus Regulator of Rac1, required for phagocytosis and cell migration [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown] | Back alignment and domain information |
|---|
| >cd01238 PH_Tec Tec pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1842 consensus FYVE finger-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >cd01264 PH_melted Melted pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ] | Back alignment and domain information |
|---|
| >smart00233 PH Pleckstrin homology domain | Back alignment and domain information |
|---|
| >cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1841 consensus Smad anchor for receptor activation [Defense mechanisms] | Back alignment and domain information |
|---|
| >KOG1843 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
| >cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd00821 PH Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd00900 PH-like Pleckstrin homology-like domain | Back alignment and domain information |
|---|
| >PF15409 PH_8: Pleckstrin homology domain | Back alignment and domain information |
|---|
| >cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain | Back alignment and domain information |
|---|
| >cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG2059 consensus Ras GTPase-activating protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG4424 consensus Predicted Rho/Rac guanine nucleotide exchange factor/faciogenital dysplasia protein 3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01241 PH_Akt Akt pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1811 consensus Predicted Zn2+-binding protein, contains FYVE domain [General function prediction only] | Back alignment and domain information |
|---|
| >PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C | Back alignment and domain information |
|---|
| >PF11725 AvrE: Pathogenicity factor; InterPro: IPR021085 This family is secreted by Gram-negative Gammaproteobacteria such as Pseudomonas syringae of tomato and Erwinia amylovora (Fire blight bacteria), amongst others | Back alignment and domain information |
|---|
| >cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG1265 consensus Phospholipase C [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF08458 PH_2: Plant pleckstrin homology-like region; InterPro: IPR013666 This domain describes a pleckstrin homology (PH)-like region found in several plant proteins of unknown function | Back alignment and domain information |
|---|
| >cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0943 consensus Predicted ubiquitin-protein ligase/hyperplastic discs protein, HECT superfamily [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PF02318 FYVE_2: FYVE-type zinc finger; InterPro: IPR003315 This entry represents the zinc-binding domain found in rabphilin Rab3A | Back alignment and domain information |
|---|
| >cd01232 PH_TRIO Trio pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PF03904 DUF334: Domain of unknown function (DUF334); InterPro: IPR005602 This is a family of proteins found in Staphylococcus aureus plasmid with no characterised function | Back alignment and domain information |
|---|
| >PRK15396 murein lipoprotein; Provisional | Back alignment and domain information |
|---|
| >KOG3669 consensus Uncharacterized conserved protein, contains dysferlin, TECPR and PH domains [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0230 consensus Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PHA01750 hypothetical protein | Back alignment and domain information |
|---|
| >COG3074 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
| >TIGR02449 conserved hypothetical protein TIGR02449 | Back alignment and domain information |
|---|
| >cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG3669 consensus Uncharacterized conserved protein, contains dysferlin, TECPR and PH domains [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2391 consensus Vacuolar sorting protein/ubiquitin receptor VPS23 [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
| >cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >KOG4693 consensus Uncharacterized conserved protein, contains kelch repeat [General function prediction only] | Back alignment and domain information |
|---|
| >cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain | Back alignment and domain information |
|---|
| >PRK14161 heat shock protein GrpE; Provisional | Back alignment and domain information |
|---|
| >PF02183 HALZ: Homeobox associated leucine zipper; InterPro: IPR003106 This region is a plant specific leucine zipper that is always found associated with a homeobox [] | Back alignment and domain information |
|---|
| >PF04728 LPP: Lipoprotein leucine-zipper; InterPro: IPR006817 This repeating sequence, NAKVDQLSNDV, is found in the enterobacterial outer membrane lipoprotein LPP | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 902 | ||||
| 4dnv_A | 370 | Crystal Structure Of The W285f Mutant Of Uvb-Resist | 1e-45 | ||
| 4dnv_A | 370 | Crystal Structure Of The W285f Mutant Of Uvb-Resist | 7e-23 | ||
| 4dnv_A | 370 | Crystal Structure Of The W285f Mutant Of Uvb-Resist | 1e-09 | ||
| 4d9s_A | 406 | Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv | 1e-45 | ||
| 4d9s_A | 406 | Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv | 7e-23 | ||
| 4d9s_A | 406 | Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv | 1e-09 | ||
| 4dnw_A | 374 | Crystal Structure Of Uvb-Resistance Protein Uvr8 Le | 2e-45 | ||
| 4dnw_A | 374 | Crystal Structure Of Uvb-Resistance Protein Uvr8 Le | 9e-23 | ||
| 4dnw_A | 374 | Crystal Structure Of Uvb-Resistance Protein Uvr8 Le | 2e-09 | ||
| 4dnu_A | 372 | Crystal Structure Of The W285a Mutant Of Uvb-Resist | 7e-44 | ||
| 4dnu_A | 372 | Crystal Structure Of The W285a Mutant Of Uvb-Resist | 6e-23 | ||
| 3kci_A | 389 | The Third Rld Domain Of Herc2 Length = 389 | 2e-36 | ||
| 3kci_A | 389 | The Third Rld Domain Of Herc2 Length = 389 | 4e-19 | ||
| 1a12_A | 413 | Regulator Of Chromosome Condensation (Rcc1) Of Huma | 2e-20 | ||
| 1i2m_B | 402 | Ran-Rcc1-So4 Complex Length = 402 | 8e-20 | ||
| 3mvd_K | 423 | Crystal Structure Of The Chromatin Factor Rcc1 In C | 4e-16 | ||
| 3of7_A | 473 | The Crystal Structure Of Prp20p From Saccharomyces | 6e-12 | ||
| 1joc_A | 125 | Eea1 Homodimer Of C-Terminal Fyve Domain Bound To I | 6e-05 | ||
| 1z2q_A | 84 | High-Resolution Solution Structure Of The Lm5-1 Fyv | 8e-05 |
| >pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance Protein Uvr8 Length = 370 | Back alignment and structure |
|
| >pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance Protein Uvr8 Length = 370 | Back alignment and structure |
| >pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance Protein Uvr8 Length = 370 | Back alignment and structure |
| >pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv Resistance Locus 8) Length = 406 | Back alignment and structure |
| >pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv Resistance Locus 8) Length = 406 | Back alignment and structure |
| >pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv Resistance Locus 8) Length = 406 | Back alignment and structure |
| >pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8 Length = 374 | Back alignment and structure |
| >pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8 Length = 374 | Back alignment and structure |
| >pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8 Length = 374 | Back alignment and structure |
| >pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance Protein Uvr8 Length = 372 | Back alignment and structure |
| >pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance Protein Uvr8 Length = 372 | Back alignment and structure |
| >pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2 Length = 389 | Back alignment and structure |
| >pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2 Length = 389 | Back alignment and structure |
| >pdb|1A12|A Chain A, Regulator Of Chromosome Condensation (Rcc1) Of Human Length = 413 | Back alignment and structure |
| >pdb|1I2M|B Chain B, Ran-Rcc1-So4 Complex Length = 402 | Back alignment and structure |
| >pdb|3MVD|K Chain K, Crystal Structure Of The Chromatin Factor Rcc1 In Complex With The Nucleosome Core Particle Length = 423 | Back alignment and structure |
| >pdb|3OF7|A Chain A, The Crystal Structure Of Prp20p From Saccharomyces Cerevisiae And Its Binding Properties To Gsp1p And Histones Length = 473 | Back alignment and structure |
| >pdb|1JOC|A Chain A, Eea1 Homodimer Of C-Terminal Fyve Domain Bound To Inositol 1,3-Diphosphate Length = 125 | Back alignment and structure |
| >pdb|1Z2Q|A Chain A, High-Resolution Solution Structure Of The Lm5-1 Fyve Domain From Leishmania Major Length = 84 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens} Length = 389 | Back alignment and structure |
|---|
Score = 403 bits (1039), Expect = e-133
Identities = 120/395 (30%), Positives = 186/395 (47%), Gaps = 31/395 (7%)
Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
G ++ WG G LG + +P E+ L + G + VT
Sbjct: 20 GTIYGWGHN-HRGQLG---GI------EGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 69
Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVA--CGEFHTCAVTLSGDLY 370
G++++ G G+GG+LG G VS P L++++ I VA G H A++ G++Y
Sbjct: 70 ADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVY 129
Query: 371 TWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDG 430
+WG+ G LG + PR + + G+++ + G H+A +T+AG L+T+G G
Sbjct: 130 SWGEAED--GKLGHGNRSPCDRPRVIES-LRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 186
Query: 431 TFGALGHGDRSSTSVPREVETLKELKTVMASCGVW--HTAAIVEVAGKTSGSNGLSSKKL 488
+G LGH D P+ VE L+ + V +CG T + +
Sbjct: 187 RYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCL------------TDDDTV 234
Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVACGHSITIALTATGQVFSMGSADY 548
++WGDG G+LG G ++ VP+ + + KV CG ++ALT +G V++ G DY
Sbjct: 235 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDY 294
Query: 549 GQLGSPGSTGK-FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGD 607
+LG P +++G ++ + + IA GS H + EVYTWG GQLG G
Sbjct: 295 HRLGHGSDDHVRRPRQVQG-LQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGT 353
Query: 608 NENKQTPTLVEALRDKQVKSVVCGSNFTAAICLHK 642
Q P LV AL+ K+V V CGS T A K
Sbjct: 354 TNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSK 388
|
| >3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens} Length = 389 | Back alignment and structure |
|---|
| >3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens} Length = 389 | Back alignment and structure |
|---|
| >4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A Length = 406 | Back alignment and structure |
|---|
| >4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A Length = 406 | Back alignment and structure |
|---|
| >4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A Length = 406 | Back alignment and structure |
|---|
| >4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A Length = 406 | Back alignment and structure |
|---|
| >4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A Length = 406 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster} Length = 423 | Back alignment and structure |
|---|
| >1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B Length = 413 | Back alignment and structure |
|---|
| >1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B Length = 413 | Back alignment and structure |
|---|
| >1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B Length = 413 | Back alignment and structure |
|---|
| >1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B Length = 413 | Back alignment and structure |
|---|
| >3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae} Length = 473 | Back alignment and structure |
|---|
| >3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae} Length = 473 | Back alignment and structure |
|---|
| >3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae} Length = 473 | Back alignment and structure |
|---|
| >3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae} Length = 473 | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B Length = 282 | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B Length = 282 | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B Length = 282 | Back alignment and structure |
|---|
| >3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B Length = 282 | Back alignment and structure |
|---|
| >1mai_A Phospholipase C delta-1; pleckstrin, inositol trisphosphate, signal transduction protein, hydrolase; HET: I3P; 1.90A {Rattus norvegicus} SCOP: b.55.1.1 Length = 131 | Back alignment and structure |
|---|
| >1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A Length = 125 | Back alignment and structure |
|---|
| >2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A Length = 82 | Back alignment and structure |
|---|
| >1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major} Length = 84 | Back alignment and structure |
|---|
| >1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1 Length = 88 | Back alignment and structure |
|---|
| >3a98_B Engulfment and cell motility protein 1; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens} PDB: 2vsz_A Length = 203 | Back alignment and structure |
|---|
| >3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens} Length = 90 | Back alignment and structure |
|---|
| >1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1 Length = 73 | Back alignment and structure |
|---|
| >1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1 Length = 220 | Back alignment and structure |
|---|
| >1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 84 | Back alignment and structure |
|---|
| >3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A* Length = 226 | Back alignment and structure |
|---|
| >3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens} Length = 434 | Back alignment and structure |
|---|
| >3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens} Length = 885 | Back alignment and structure |
|---|
| >2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B Length = 799 | Back alignment and structure |
|---|
| >1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1 Length = 120 | Back alignment and structure |
|---|
| >3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A Length = 816 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3tfm_A Myosin X; split PH domain, motor protein; 2.53A {Rattus norvegicus} Length = 228 | Back alignment and structure |
|---|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
| >1v5u_A SBF1, SET binding factor 1; MTMR5, the pleckstrin homology domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.55.1.1 Length = 117 | Back alignment and structure |
|---|
| >2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A Length = 406 | Back alignment and structure |
|---|
| >1eaz_A Tandem PH domain containing protein-1; lipid-binding protein, lipid degradation, phosphatidylinositol (3, 4)-bisphosphate, signalling; HET: CIT; 1.40A {Homo sapiens} SCOP: b.55.1.1 Length = 125 | Back alignment and structure |
|---|
| >1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1 Length = 134 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 902 | ||||
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 3e-40 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 3e-31 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 4e-22 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 1e-21 | |
| d1a12a_ | 401 | b.69.5.1 (A:) Regulator of chromosome condensation | 6e-16 | |
| d1maia_ | 119 | b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus | 1e-32 | |
| d2zkmx3 | 131 | b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human | 2e-24 | |
| d1jtdb_ | 273 | b.69.5.2 (B:) beta-lactamase inhibitor protein-II, | 9e-18 | |
| d1jtdb_ | 273 | b.69.5.2 (B:) beta-lactamase inhibitor protein-II, | 2e-13 | |
| d1jtdb_ | 273 | b.69.5.2 (B:) beta-lactamase inhibitor protein-II, | 5e-08 | |
| d1jtdb_ | 273 | b.69.5.2 (B:) beta-lactamase inhibitor protein-II, | 0.001 | |
| d1joca1 | 64 | g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) | 7e-16 | |
| d1dvpa2 | 72 | g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila me | 1e-15 | |
| d1vfya_ | 67 | g.50.1.1 (A:) vps27p protein {Baker's yeast (Sacch | 1e-14 | |
| d1wfka_ | 88 | g.50.1.1 (A:) Zinc finger FYVE domain containing p | 1e-14 | |
| d1y02a2 | 51 | g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger pro | 1e-12 | |
| d1zbdb_ | 124 | g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat | 3e-12 | |
| d1eaza_ | 103 | b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: | 8e-05 | |
| d1qqga1 | 103 | b.55.1.2 (A:12-114) Insulin receptor substrate 1, | 9e-05 | |
| d2i5fa1 | 104 | b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapie | 1e-04 | |
| d1u5ea1 | 209 | b.55.1.1 (A:14-222) Src-associated adaptor protein | 0.003 | |
| d1unqa_ | 118 | b.55.1.1 (A:) Rac-alpha serine/threonine kinase {H | 0.003 | |
| d1fgya_ | 127 | b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 1 | 0.003 |
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: RCC1/BLIP-II family: Regulator of chromosome condensation RCC1 domain: Regulator of chromosome condensation RCC1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 151 bits (381), Expect = 3e-40
Identities = 92/403 (22%), Positives = 151/403 (37%), Gaps = 26/403 (6%)
Query: 253 GDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVT 312
G V G+G G LG N +E P ++ D G H V ++
Sbjct: 15 GLVLTLGQG-DVGQLGLGENVMERKK--------PALVSIPE--DVVQAEAGGMHTVCLS 63
Query: 313 KQGQIFSWGEGSGGKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTW 372
K GQ++S+G G LG + S + V+ G+ HT A+T G ++ W
Sbjct: 64 KSGQVYSFGCNDEGALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLW 123
Query: 373 GDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQISSICCGPWHTAAITSAGKLFTFGDGTF 432
G N G++G + + + + + + G H +T+ G L+T G G
Sbjct: 124 GSFRDNNGVIGLLEPMKKSMVPVQ--VQLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQ 181
Query: 433 GALGHGDRSSTSVPREVETLKELKTVMASCGVWHTAAIVEVAGKTSGSNG----LSSKKL 488
G LG + + L + V G+ +
Sbjct: 182 GQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHV 241
Query: 489 FTWGDGAEGQLGHGDAEPRVVPLCVKVSDDISFCKVA--CGHSITIALTATGQVFSMGSA 546
+ +G QLG E +P + + + V G T+ + + G+ +S+G A
Sbjct: 242 YGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRA 301
Query: 547 DYGQLGSPGSTG--KFPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLG 604
+YG+LG PT I + +ACG+ V+ V+ WG G N QLG
Sbjct: 302 EYGRLGLGEGAEEKSIPTLISRLPA---VSSVACGASVGYAVTKDGRVFAWGMGTNYQLG 358
Query: 605 HGDNENKQTPTLV--EALRDKQVKSVVCGSNFTAAICLHKGVS 645
G +E+ +P + + L ++ V SV G T + K S
Sbjct: 359 TGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDKEQS 401
|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} Length = 401 | Back information, alignment and structure |
|---|
| >d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 119 | Back information, alignment and structure |
|---|
| >d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 131 | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} Length = 273 | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} Length = 273 | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} Length = 273 | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} Length = 273 | Back information, alignment and structure |
|---|
| >d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]} Length = 64 | Back information, alignment and structure |
|---|
| >d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 72 | Back information, alignment and structure |
|---|
| >d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 67 | Back information, alignment and structure |
|---|
| >d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]} Length = 88 | Back information, alignment and structure |
|---|
| >d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]} Length = 51 | Back information, alignment and structure |
|---|
| >d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 124 | Back information, alignment and structure |
|---|
| >d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 103 | Back information, alignment and structure |
|---|
| >d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 103 | Back information, alignment and structure |
|---|
| >d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} Length = 104 | Back information, alignment and structure |
|---|
| >d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 209 | Back information, alignment and structure |
|---|
| >d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 118 | Back information, alignment and structure |
|---|
| >d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 127 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 902 | |||
| d1a12a_ | 401 | Regulator of chromosome condensation RCC1 {Human ( | 100.0 | |
| d1a12a_ | 401 | Regulator of chromosome condensation RCC1 {Human ( | 100.0 | |
| d1jtdb_ | 273 | beta-lactamase inhibitor protein-II, BLIP-II {Stre | 100.0 | |
| d1jtdb_ | 273 | beta-lactamase inhibitor protein-II, BLIP-II {Stre | 100.0 | |
| d1maia_ | 119 | Phospholipase C delta-1 {Rat (Rattus norvegicus) [ | 99.89 | |
| d2zkmx3 | 131 | Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI | 99.79 | |
| d1joca1 | 64 | Eea1 {Human (Homo sapiens) [TaxId: 9606]} | 99.29 | |
| d1wfka_ | 88 | Zinc finger FYVE domain containing protein 19 {Mou | 99.15 | |
| d1dvpa2 | 72 | Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7 | 99.12 | |
| d1vfya_ | 67 | vps27p protein {Baker's yeast (Saccharomyces cerev | 99.05 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 98.46 | |
| d1y02a2 | 51 | Rififylin (FYVE-RING finger protein Sakura) {Human | 98.3 | |
| d1btka_ | 169 | Bruton's tyrosine kinase {Human (Homo sapiens) [Ta | 98.19 | |
| d1zbdb_ | 124 | Effector domain of rabphilin-3a {Rat (Rattus norve | 98.04 | |
| d1v5ua_ | 117 | SET binding factor 1, Sbf1 {Mouse (Mus musculus) [ | 98.02 | |
| d1faoa_ | 100 | Dual adaptor of phosphotyrosine and 3-phosphoinosi | 97.76 | |
| d1eaza_ | 103 | Tapp1 {Human (Homo sapiens) [TaxId: 9606]} | 97.72 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 97.67 | |
| d1x1fa1 | 136 | Signal-transducing adaptor protein 1, STAP-1 {Huma | 97.66 | |
| d1u5da1 | 106 | Src kinase-associated phosphoprotein SKAP55 (SCAP1 | 97.64 | |
| d1u5fa1 | 111 | Src-associated adaptor protein Skap2 {Mouse (Mus m | 97.63 | |
| d1u5ea1 | 209 | Src-associated adaptor protein Skap2 {Mouse (Mus m | 97.62 | |
| d1v5pa_ | 126 | Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} | 97.6 | |
| d2coaa1 | 112 | Protein kinase c, d2 type {Human (Homo sapiens) [T | 97.6 | |
| d2coda1 | 102 | Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 96 | 97.56 | |
| d1omwa2 | 119 | G-protein coupled receptor kinase 2 (beta-adrenerg | 97.54 | |
| d1x1ga1 | 116 | Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} | 97.48 | |
| d1wg7a_ | 150 | Dedicator of cytokinesis protein 9, DOCK9 {Human ( | 97.46 | |
| d1wi1a_ | 126 | Calcium-dependent activator protein for secretion, | 97.41 | |
| d1plsa_ | 113 | Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | 97.27 | |
| d2fjla1 | 101 | Phosphoinositide phospholipase C, PLC-gamma-1 {Rat | 97.08 | |
| d1w1ha_ | 147 | 3-phosphoinositide dependent protein kinase-1 {Hum | 97.06 | |
| d1v89a_ | 118 | Rho-GTPase-activating protein 25 (KIAA0053) {Human | 97.06 | |
| d1v5ma_ | 136 | SH2 and PH domain-containing adapter protein APS { | 97.03 | |
| d2i5fa1 | 104 | Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | 96.94 | |
| d1qqga1 | 103 | Insulin receptor substrate 1, IRS-1 {Human (Homo s | 96.93 | |
| d1wgqa_ | 109 | FYVE, RhoGEF and PH domain containing protein 6, F | 96.84 | |
| d2coca1 | 99 | FYVE, RhoGEF and PH domain containing protein 3, F | 96.81 | |
| d1unqa_ | 118 | Rac-alpha serine/threonine kinase {Human (Homo sap | 96.66 | |
| d1upqa_ | 107 | Phosphoinositol 3-phosphate binding protein-1, PEP | 96.54 | |
| d1fgya_ | 127 | Grp1 {Mouse (Mus musculus) [TaxId: 10090]} | 96.3 | |
| d2cofa1 | 95 | KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} | 96.22 | |
| d2elba2 | 101 | DCC-interacting protein 13-alpha, APPL1 {Human (Ho | 96.15 | |
| d1wjma_ | 123 | beta-spectrin {Human (Homo sapiens), brain 2 isofo | 96.06 | |
| d1v88a_ | 130 | Oxysterol binding protein-related protein 8 (ORP-8 | 96.04 | |
| d1v61a_ | 132 | Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [ | 95.88 | |
| d2dfka2 | 162 | Rho guanine nucleotide exchange factor 9, Collybis | 95.74 | |
| d2dyna_ | 111 | Dynamin {Human (Homo sapiens) [TaxId: 9606]} | 95.44 | |
| d2j59m1 | 133 | Rho GTPase-activating protein 21 {Human (Homo sapi | 95.09 | |
| d1xcga2 | 140 | Rho guanine nucleotide exchange factor 11, PDZ-Rho | 95.04 | |
| d1ntya2 | 121 | Triple functional domain protein TRIO {Human (Homo | 94.97 | |
| d1btna_ | 106 | beta-spectrin {Mouse (Mus musculus), brain [TaxId: | 94.88 | |
| d1kz7a2 | 147 | Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId | 94.83 | |
| d1zc3b1 | 109 | Exocyst complex protein EXO84 {Rat (Rattus norvegi | 94.75 | |
| d1droa_ | 122 | beta-spectrin {Fruit fly (Drosophila melanogaster) | 94.72 | |
| d1txda2 | 114 | Rho guanine nucleotide exchange factor 12 {Human ( | 93.64 | |
| d1ki1b2 | 142 | GEF of intersectin {Human (Homo sapiens) [TaxId: 9 | 92.13 | |
| d1fhoa_ | 119 | UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: | 85.58 | |
| d1dbha2 | 133 | Son of sevenless-1 (sos-1) {Human (Homo sapiens) [ | 85.16 | |
| d2adza1 | 105 | Alpha-1-syntrophin {Mouse (Mus musculus) [TaxId: 1 | 81.15 |
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: RCC1/BLIP-II family: Regulator of chromosome condensation RCC1 domain: Regulator of chromosome condensation RCC1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=0 Score=465.59 Aligned_cols=369 Identities=26% Similarity=0.411 Sum_probs=312.5
Q ss_pred EEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCEEEEEECCCCEEEEECCCC
Q ss_conf 37552699399980899997348988984214667667667357323578994999914987999981991999958999
Q 002602 246 HEDFDGLGDVFIWGEGLGNGLLGGAVNGVEISSADRRDALLPKVLESTVVLDAQSIACGSKHAVLVTKQGQIFSWGEGSG 325 (902)
Q Consensus 246 ~~~l~~~G~Vy~WG~n~~~G~LG~g~~~~~~~~~~~~~~~~P~~i~~~~~~~V~~Ia~G~~hs~~Lt~dG~Vy~wG~N~~ 325 (902)
.++++.+|+||+||.|. +||||+|... .....|.+++.. .+|++|+||..|+++|+.+|+||+||.|.+
T Consensus 8 ~~~~~~~G~vy~wG~n~-~GqLG~g~~~--------~~~~~P~~v~~~--~~i~~ia~G~~h~~al~~~G~vy~wG~n~~ 76 (401)
T d1a12a_ 8 RSHSTEPGLVLTLGQGD-VGQLGLGENV--------MERKKPALVSIP--EDVVQAEAGGMHTVCLSKSGQVYSFGCNDE 76 (401)
T ss_dssp TTCCCCCBEEEEEEECT-TSTTCSCTTC--------CEEEEEEEECCS--SCEEEEEECSSEEEEEETTSCEEEEECCTT
T ss_pred EEEECCCCEEEEEECCC-CCCCCCCCCC--------CEECCCEEECCC--CCEEEEEECCCEEEEEECCCEEEEEECCCC
T ss_conf 89997898899996999-8888999988--------650357790899--992999918988999967998999958999
Q ss_pred CCCCCCCCCCCCCCEEEECCCCCCEEEEEECCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCE
Q ss_conf 98788988653365486038999789999568579999818939999188889977798888422331233147789608
Q 002602 326 GKLGHGVEADVSYPKLIDALNGSNIHMVACGEFHTCAVTLSGDLYTWGDGIHNLGLLGQVSEISHWIPRKVSGQMEGLQI 405 (902)
Q Consensus 326 GqLG~g~~~~~~~P~~V~~l~~~~I~~Ia~G~~hs~aLt~dG~Vy~WG~n~~~~GqLG~g~~~~~~~P~~v~~~l~~~~I 405 (902)
||||++.......|.++......+|++|+||..|+++++++|.||+||.+.+..++++.........+.... .....|
T Consensus 77 GQLG~g~~~~~~~~~~~~~~~~~~i~~i~~g~~~~~~~~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i 154 (401)
T d1a12a_ 77 GALGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV--QLDVPV 154 (401)
T ss_dssp STTCSCCCSTTGGGSCEECCCCSCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESSBBTBCEEEEEEE--CCSSCE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEEEE--CCCCCE
T ss_conf 887744655664235542354220022011100101000345311202145655544666775431001100--168850
Q ss_pred EEEEECCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCC-----------CCCCCC-----CCCCCEEEEEEECCCEEEE
Q ss_conf 998616873045632882999306999988999998975-----------453011-----1356809999934743699
Q 002602 406 SSICCGPWHTAAITSAGKLFTFGDGTFGALGHGDRSSTS-----------VPREVE-----TLKELKTVMASCGVWHTAA 469 (902)
Q Consensus 406 ~~IacG~~Hs~aLt~~G~VytwG~N~~GqLG~g~~~~~~-----------~P~~V~-----~l~~~~i~~VacG~~ht~a 469 (902)
++|+||..|+++++.+|++|+||.|.+||||++...... .|..+. .....++.+|+||..|+++
T Consensus 155 ~~i~~g~~~~~~~~~~g~~~~~G~n~~gqlg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~i~~v~~g~~~~~~ 234 (401)
T d1a12a_ 155 VKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFA 234 (401)
T ss_dssp EEEEECSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGGGHHHHHSCEECCCBCSSCCSBCCEEEEEEETTEEEE
T ss_pred EEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEECCCEEEE
T ss_conf 69982035225650378500346687662288875344567755544335652000035677778439999936876999
Q ss_pred EEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEECCC--CCEEEEECCCCEEEEEECCCCEEEEECCC
Q ss_conf 9950356668765689938983289998789999998032179542599--97688413765899990399199995699
Q 002602 470 IVEVAGKTSGSNGLSSKKLFTWGDGAEGQLGHGDAEPRVVPLCVKVSDD--ISFCKVACGHSITIALTATGQVFSMGSAD 547 (902)
Q Consensus 470 ite~~~~~~~~~~~~~G~Ly~WG~n~~GqLG~g~~~~~~~P~~V~~l~~--~~V~~Ia~G~~htvaLt~dG~Vy~wGsn~ 547 (902)
|+ .+|++|+||.|.++++|.+.......+..+..+.. ..++.+++|..|+++|+.+|.||+||.|.
T Consensus 235 l~------------~~g~v~~~g~n~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~~l~~~g~v~~wG~n~ 302 (401)
T d1a12a_ 235 IS------------HEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAE 302 (401)
T ss_dssp EE------------TTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGCCTTCCEEEEEECSSEEEEEETTSCEEEEECCG
T ss_pred EE------------CCCEEEEECCCCEECCCCCCCCCCEECCCCCCCCCCCEEEEEEEEECCCEEEECCCCCEEEECCCC
T ss_conf 95------------598186512221020354566310000010123554036999851012013561489788840334
Q ss_pred CCCCCCCCCCCC--CCEEEECCCCCCCEEEEEECCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECC--CCCC
Q ss_conf 999899999995--442430577888789999559779999729939999399999768999998312199604--3586
Q 002602 548 YGQLGSPGSTGK--FPTRIEGNIKHRYIEDIACGSYHIAVVSSKSEVYTWGKGANGQLGHGDNENKQTPTLVEA--LRDK 623 (902)
Q Consensus 548 ~GqLG~~~~~~~--~P~~v~~~l~~~~V~~Ia~G~~Ht~vLT~~G~Vy~WG~n~~GQLG~g~~~~~~~P~~V~~--l~~~ 623 (902)
+||||.+..... .|..++. ...|++|+||.+|+++|+++|+||+||.|.+||||+|+..++..|++|.. +.+.
T Consensus 303 ~gqlG~g~~~~~~~~P~~i~~---~~~i~~Is~G~~hs~alt~dG~v~~WG~n~~GQLG~G~~~~~~~P~~v~~~~~~~~ 379 (401)
T d1a12a_ 303 YGRLGLGEGAEEKSIPTLISR---LPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENR 379 (401)
T ss_dssp GGTTCSCTTCCCEEEEEECCS---SSSEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCSCEEEEEECCSTTTTTE
T ss_pred CCCCCCCCCCCCCCCCEECCC---CCCEEEEEEECCEEEEEECCCEEEEEECCCCCCCCCCCCCCEECCEEEECCCCCCC
T ss_conf 675678862333558888579---99829999308879999489969999259988778999988860789643578998
Q ss_pred CEEEEECCCCCCEEEEECC
Q ss_conf 0788711898530153024
Q 002602 624 QVKSVVCGSNFTAAICLHK 642 (902)
Q Consensus 624 ~V~~IacG~~hT~ai~~~k 642 (902)
+|.+|+||.+||++|+.++
T Consensus 380 ~v~~v~~G~~hs~~l~~d~ 398 (401)
T d1a12a_ 380 VVLSVSSGGQHTVLLVKDK 398 (401)
T ss_dssp EEEEEEECSSEEEEEEEEC
T ss_pred EEEEEEECCCEEEEEEECC
T ss_conf 8999997524399999799
|
| >d1a12a_ b.69.5.1 (A:) Regulator of chromosome condensation RCC1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
| >d1jtdb_ b.69.5.2 (B:) beta-lactamase inhibitor protein-II, BLIP-II {Streptomyces exfoliatus [TaxId: 1905]} | Back information, alignment and structure |
|---|
| >d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2zkmx3 b.55.1.1 (X:11-141) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
| >d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1btka_ b.55.1.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1v5ua_ b.55.1.1 (A:) SET binding factor 1, Sbf1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1eaza_ b.55.1.1 (A:) Tapp1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
| >d1x1fa1 b.55.1.1 (A:8-143) Signal-transducing adaptor protein 1, STAP-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1u5fa1 b.55.1.1 (A:109-219) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1u5ea1 b.55.1.1 (A:14-222) Src-associated adaptor protein Skap2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1v5pa_ b.55.1.1 (A:) Tapp2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2coaa1 b.55.1.1 (A:8-119) Protein kinase c, d2 type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2coda1 b.55.1.1 (A:8-109) Centaurin-delta 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1omwa2 b.55.1.1 (A:550-668) G-protein coupled receptor kinase 2 (beta-adrenergic receptor kinase 1) {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
| >d1x1ga1 b.55.1.1 (A:8-123) Pleckstrin-2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wi1a_ b.55.1.1 (A:) Calcium-dependent activator protein for secretion, CAPS {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1w1ha_ b.55.1.1 (A:) 3-phosphoinositide dependent protein kinase-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2i5fa1 b.55.1.1 (A:244-347) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qqga1 b.55.1.2 (A:12-114) Insulin receptor substrate 1, IRS-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wgqa_ b.55.1.1 (A:) FYVE, RhoGEF and PH domain containing protein 6, Fgd6 (KIAA1362) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2coca1 b.55.1.1 (A:8-106) FYVE, RhoGEF and PH domain containing protein 3, FGD3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1unqa_ b.55.1.1 (A:) Rac-alpha serine/threonine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1upqa_ b.55.1.1 (A:) Phosphoinositol 3-phosphate binding protein-1, PEPP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1fgya_ b.55.1.1 (A:) Grp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2cofa1 b.55.1.1 (A:8-102) KIAA1914 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2elba2 b.55.1.1 (A:274-374) DCC-interacting protein 13-alpha, APPL1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wjma_ b.55.1.1 (A:) beta-spectrin {Human (Homo sapiens), brain 2 isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v88a_ b.55.1.1 (A:) Oxysterol binding protein-related protein 8 (ORP-8, KIAA1451) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1v61a_ b.55.1.1 (A:) Rac/CDC42 GEF 6, alpha-pix {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2dfka2 b.55.1.1 (A:240-401) Rho guanine nucleotide exchange factor 9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2dyna_ b.55.1.1 (A:) Dynamin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xcga2 b.55.1.1 (A:942-1081) Rho guanine nucleotide exchange factor 11, PDZ-RhoGEF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ntya2 b.55.1.1 (A:1415-1535) Triple functional domain protein TRIO {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1btna_ b.55.1.1 (A:) beta-spectrin {Mouse (Mus musculus), brain [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1kz7a2 b.55.1.1 (A:819-965) Dbl's big sister, Dbs {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1zc3b1 b.55.1.1 (B:171-279) Exocyst complex protein EXO84 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1droa_ b.55.1.1 (A:) beta-spectrin {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1txda2 b.55.1.1 (A:1020-1133) Rho guanine nucleotide exchange factor 12 {Human (Homo sapiens), gamma isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ki1b2 b.55.1.1 (B:1439-1580) GEF of intersectin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1fhoa_ b.55.1.1 (A:) UNC-89 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
| >d1dbha2 b.55.1.1 (A:418-550) Son of sevenless-1 (sos-1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2adza1 b.55.1.1 (A:1-43,A:117-178) Alpha-1-syntrophin {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|