Citrus Sinensis ID: 002784

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-
MSFILKSFASNSSVSTPREATIAMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLKFLSFLNVTCYSICSGDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAAVS
cHHHHHHHHccccccccHHHHHHHHHcccEEEEccccccccccccccHHHHHccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcHHcHHHHHHHHHcccccEEccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccEEEEEccccccccccHHcccccccEEEEEEcccccccccccccccccccccccccccEEEEEEcccHHHHHHHHcccEEEEEEEEccccccccccccccccccccEEEccEEEcccccccccccccccHHHHHHHHHcccccccccccccccccccccccccEEcccccHHHHHHHHHcccccccccccccccccccccccEEEEccccccccHHHHHHHHHHHHcccEEEccccccccEEEccccccccccccccccccHHHHHHHHHHHHHHHccHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHcccccccccccccccEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccHHHHHHHHHHHHccccHHHHHHHEEEEEEEEEccccccccccccccccccccccccEEEEEEEcccccccccccEEcccccccccccccHHHHHHHcccccccccccc
cccHHHHHccccccccHHHHHHHHHHccccEEEccccccccccccccHHEHcccccEEEEEEEEEEEEEEccccccccccccccccccHHHHHHHHccccccccHHHHHccccccccccccccccccHHHHHHHHHHcHHHHHHHcccccEccEccccccccccccccHHHHHHHHHHHHHHHHHcccEcccEEEEcccHHHHHHHHHHHcccccHHHHcHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEcccHHHHHHHHHHHHHcccEEcccccEEcccccHHHHHHHHHccEEEEEEcccccccccEEEEEcccccEEEEEEcccccccccEEEEEcccccHccccccccEEEEHHHHHHHHHHHHcccEEEEEEEccHHHccEEEEcccccccccccccccccccccccccccEccccccHHHHcccccccccccccccccccccccccccccHHHHHHHHccHHHccHHHHccccEEEEEEEEEEcccccEcEEEEEEEEEEcHHHHHHHHHHHHccccEcHHHHHHHccHHHHHHHHHcccccccEEccHHHHHHHHHHHHHHHHHHHHHHHccccccccHcccHHHccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccccccEEEEcccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEcccccccHHHHccccHHHHHHcccccEEEEEEcccEEccccccEEcccEEEccEEEEcHHHHHHHccccccEEEEEc
msfilksfasnssvstprEATIAMMQSSSYRVLSRRTCSSFRKKASVnlfdsrgssslkFLSFLNVTCysicsgdefcssskrrsrgpvmaAKKAaegekkeegrykhtvdlpkttfgmranalvrepeihklWDDHQVFLRVAdkndgenfvlhdgppyangnlhmGHALNKILKDIINRYKLLQNYkvryvpgwdchglpIELKVLQSLdedakkdltpSKLRAKAAKFAKATVKAQMASFKRYgvwadwnnpyltldpeyeaaqypeghvsRSIYAVFRMvsappstsgllneflpdlglavwtttpwtvpanaAVAVNAKLQYAVVEIQSllegdsaapankksrpgnvlkdqKKVFIIVASDlvptleakwgtKLVIKKTlagsdlencryvhpvdnrqcpvviggdyittesgtglvhtapghgqedyvtslkyglpilspvddegkfteeagkfsgldvlgdgNVAVVKYLDEQMSLImeepyehkypydwrtkkptiFRATEQWFASVEGFRQAAMDAIgqvkwvppqeapgygadVLRLWVSSVdytgdvmigpqVLRQMSDIYRKLRGTLRYLLGNlhdwrvgnsisyddlpmiDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSnfyfdvakdrlytggttsftRRSCQTVLSAHLLSIVRVIAPilphlaedvwqnlpfaytledgsaaefvfeskwpvldekwrtfpvgeiYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQvevlpstpnglirnipysgeylvegkdKVWIgvsraegskcercwnystqvgsfvehptlcsrcyevlavqpipsmaavs
msfilksfasnssvstpreATIAMMQSSSYRVLSRRTCSSFRKKAsvnlfdsrgssslKFLSFLNVTCYSICSGDefcssskrrsrgpvmaakkaaegekkeegrykhtvdlpkttfgmRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLlegdsaapankksrpgnvlkdqkkVFIIVASdlvptleakwgtkLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGkfsgldvlgdgNVAVVKYLDEQMSLIMEepyehkypydWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVartgkligssleakvYLFTDDASLASRLREMCTAKHDADTLQRIFIISqvevlpstpnglIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAAVS
MSFILKSFASNSSVSTPREATIAMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLKFLSFLNVTCYSICSGDEFCSSSKRRSRGPVMaakkaaegekkeegRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSklrakaakfakatvkaQMASFKRYGVWADWNNPYLTLDPEYEAAQYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLavwtttpwtvpanaavavnaKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYqffkifqiiqrfiiVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAAVS
**********************************************VNLFD****SSLKFLSFLNVTCYSICSGDEFC*******************************VDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL*****************AKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLL*******************DQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQP********
********ASNSSVSTP**ATIAMMQSSSYRVL***********ASVNLFDSRGSSSLKFLSFLNVT******************************************VDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQS********LTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPI*******
MSFILKSFASNSSVSTPREATIAMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLKFLSFLNVTCYSICSGDEFC**************************RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL*************AQMASFKRYGVWADWNNPYLTLDPEYEAAQYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAAVS
**************************S*SYR*LSRRTCSSFRKKASVNLFDSRGSSSLKFLSFLNVTCYSICS******************************GRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAAVS
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSFILKSFASNSSVSTPREATIAMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLKFLSFLNVTCYSICSGDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPIPSMAAVS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query881 2.2.26 [Sep-21-2011]
B2IZP5 959 Isoleucine--tRNA ligase O yes no 0.473 0.434 0.577 1e-158
Q8YXY3 960 Isoleucine--tRNA ligase O yes no 0.475 0.436 0.585 1e-158
B7KFT1 959 Isoleucine--tRNA ligase O yes no 0.471 0.432 0.560 1e-153
B7K5H5 959 Isoleucine--tRNA ligase O yes no 0.471 0.432 0.554 1e-150
B0JSP4 952 Isoleucine--tRNA ligase O yes no 0.456 0.422 0.556 1e-149
B1WVA3 959 Isoleucine--tRNA ligase O yes no 0.466 0.428 0.558 1e-147
B8HMX3 955 Isoleucine--tRNA ligase O yes no 0.464 0.428 0.545 1e-146
P73505 988 Isoleucine--tRNA ligase O N/A no 0.471 0.420 0.552 1e-146
B0C872 971 Isoleucine--tRNA ligase O yes no 0.464 0.421 0.537 1e-143
Q8DGI7 953 Isoleucine--tRNA ligase O yes no 0.465 0.430 0.537 1e-141
>sp|B2IZP5|SYI_NOSP7 Isoleucine--tRNA ligase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ileS PE=3 SV=1 Back     alignment and function desciption
 Score =  561 bits (1445), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 272/471 (57%), Positives = 333/471 (70%), Gaps = 54/471 (11%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK TV+LPKT+F MRANA+ REPEI K W++++++ R+ + N GE F+LHDGPPYA
Sbjct: 3   ESGSYKDTVNLPKTSFDMRANAIKREPEIQKFWEENKIYDRLFENNPGELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIINRY++L+  KVRYVPGWDCHGLPIELKVLQ++    +++LTP
Sbjct: 63  NGSLHIGHALNKILKDIINRYQMLRGRKVRYVPGWDCHGLPIELKVLQNMKSAERQNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ-------------- 267
            +LR KA +F  ATV  Q  +FKRYG+W DW+NPYLTL PEYEAAQ              
Sbjct: 123 LQLRQKAKEFGLATVDNQRQNFKRYGIWGDWDNPYLTLKPEYEAAQIGVFGQMFLKGYIY 182

Query: 268 ----------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 305
                                 YPEGHVSRSIYA F + S   +   LL E+  DLG+A+
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHVSRSIYAAFPVTSLAEAVKPLLAEYQSDLGVAI 242

Query: 306 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 365
           WTTTPWT+P N AVAVNA L YAVVE+       S + A  K +           ++IVA
Sbjct: 243 WTTTPWTIPGNLAVAVNADLNYAVVEV-------SQSEAQSKFK-----------YLIVA 284

Query: 366 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 425
           +DLV  L +  G +L +K T  G+DLE+  Y HP+ +R+ P+V+GGDYITTESGTGLVHT
Sbjct: 285 ADLVERLSSTLGLELTLKATFKGNDLEHTTYRHPLFDRESPIVVGGDYITTESGTGLVHT 344

Query: 426 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 485
           APGHGQEDY+   +YGLPIL+PVDD G FT+EAG+F+GL+VLGDGN AV+  L    SL+
Sbjct: 345 APGHGQEDYIVGQRYGLPILAPVDDNGNFTQEAGEFAGLNVLGDGNQAVIDALAAAGSLL 404

Query: 486 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 536
            EEPY HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A+ AI  VKW+P Q
Sbjct: 405 KEEPYPHKYPYDWRTKKPTIFRATEQWFASVEGFREEALKAIATVKWIPAQ 455
Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).
Nostoc punctiforme (strain ATCC 29133 / PCC 73102) (taxid: 63737)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 5
>sp|Q8YXY3|SYI_NOSS1 Isoleucine--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=ileS PE=3 SV=1 Back     alignment and function description
>sp|B7KFT1|SYI_CYAP7 Isoleucine--tRNA ligase OS=Cyanothece sp. (strain PCC 7424) GN=ileS PE=3 SV=1 Back     alignment and function description
>sp|B7K5H5|SYI_CYAP8 Isoleucine--tRNA ligase OS=Cyanothece sp. (strain PCC 8801) GN=ileS PE=3 SV=1 Back     alignment and function description
>sp|B0JSP4|SYI_MICAN Isoleucine--tRNA ligase OS=Microcystis aeruginosa (strain NIES-843) GN=ileS PE=3 SV=1 Back     alignment and function description
>sp|B1WVA3|SYI_CYAA5 Isoleucine--tRNA ligase OS=Cyanothece sp. (strain ATCC 51142) GN=ileS PE=3 SV=1 Back     alignment and function description
>sp|B8HMX3|SYI_CYAP4 Isoleucine--tRNA ligase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ileS PE=3 SV=1 Back     alignment and function description
>sp|P73505|SYI_SYNY3 Isoleucine--tRNA ligase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ileS PE=3 SV=1 Back     alignment and function description
>sp|B0C872|SYI_ACAM1 Isoleucine--tRNA ligase OS=Acaryochloris marina (strain MBIC 11017) GN=ileS PE=3 SV=1 Back     alignment and function description
>sp|Q8DGI7|SYI_THEEB Isoleucine--tRNA ligase OS=Thermosynechococcus elongatus (strain BP-1) GN=ileS PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query881
255551751 1102 isoleucyl tRNA synthetase, putative [Ric 0.589 0.470 0.734 0.0
356564073 1093 PREDICTED: isoleucyl-tRNA synthetase-lik 0.604 0.487 0.691 0.0
222422851955 AT5G49030 [Arabidopsis thaliana] 0.600 0.553 0.691 0.0
449433407 1093 PREDICTED: isoleucine--tRNA ligase-like 0.600 0.483 0.708 0.0
449513369 1093 PREDICTED: isoleucine--tRNA ligase-like 0.600 0.483 0.706 0.0
297795625 1095 hypothetical protein ARALYDRAFT_494966 [ 0.600 0.483 0.699 0.0
334188274 1279 isoleucyl-tRNA synthetase [Arabidopsis t 0.600 0.413 0.694 0.0
22327660 1093 isoleucyl-tRNA synthetase [Arabidopsis t 0.600 0.483 0.694 0.0
225432320 1105 PREDICTED: isoleucyl-tRNA synthetase-lik 0.600 0.478 0.708 0.0
79330394955 isoleucyl-tRNA synthetase [Arabidopsis t 0.600 0.553 0.694 0.0
>gi|255551751|ref|XP_002516921.1| isoleucyl tRNA synthetase, putative [Ricinus communis] gi|223544009|gb|EEF45535.1| isoleucyl tRNA synthetase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  828 bits (2139), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/569 (73%), Positives = 468/569 (82%), Gaps = 50/569 (8%)

Query: 17  PREAT--IAMMQSSSYRVLSRRTCS-SFRKKASVNLFDSRGSSSLKFLSFLNVTCYSICS 73
           P EAT  IAM  SSS R L+RR+CS S R   +V++F  RGSSS K LSFLN   Y   S
Sbjct: 11  PGEATTAIAMFHSSSSRALTRRSCSPSLRNVTAVDVFYYRGSSSTKVLSFLNTNRYCTYS 70

Query: 74  GDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKL 133
            DEF +SSKRRSRGPVMAAKK+++GEK+EEG+YKHTVDLPKTTF MRANAL REPE+ KL
Sbjct: 71  SDEFGTSSKRRSRGPVMAAKKSSDGEKQEEGKYKHTVDLPKTTFSMRANALTREPELQKL 130

Query: 134 WDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYV 193
           WDD+QVF RV DKNDG NF+LHDGPPYANG+LH+GHA+NKILKD+INRYK+LQNYKV +V
Sbjct: 131 WDDNQVFKRVVDKNDGGNFILHDGPPYANGDLHIGHAMNKILKDVINRYKILQNYKVHFV 190

Query: 194 PGWDCHGLPIELK----------VLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASF 243
           PGWDCHGLPIELK           LQSLD+ A++DLTPSKLRAKAAKFAKATVK QMASF
Sbjct: 191 PGWDCHGLPIELKGKYKVLFWLRFLQSLDQGAREDLTPSKLRAKAAKFAKATVKTQMASF 250

Query: 244 KRYGVWADWNNPYLTLDPEYEAAQ------------------------------------ 267
           KRYGVWADW+NPYLTLDP+YEAAQ                                    
Sbjct: 251 KRYGVWADWDNPYLTLDPDYEAAQIEVFGQMALQGYIYRGRKPVHWSPSSHTALAEAELE 310

Query: 268 YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQY 327
           YPEGHVS+SIYA+FR+ SAPP++  LL EF PDL LA+WTTTPWTVPANAAVAVN+KLQY
Sbjct: 311 YPEGHVSKSIYAIFRVASAPPTSRLLLEEFFPDLFLAIWTTTPWTVPANAAVAVNSKLQY 370

Query: 328 AVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLA 387
           AVVE+QSL E  S +P NKK R GNVL++QKK+F+IVASDL+PTLEAKW  KLVIKKTL+
Sbjct: 371 AVVEVQSL-EDASTSPGNKKRRFGNVLREQKKLFLIVASDLMPTLEAKWSVKLVIKKTLS 429

Query: 388 GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSP 447
           GSDLENCRY+HP+DNR+CPVVIGGDYITTESGTGLVHTAPGHGQEDY+T +KYGLP+LSP
Sbjct: 430 GSDLENCRYIHPIDNRECPVVIGGDYITTESGTGLVHTAPGHGQEDYITGMKYGLPVLSP 489

Query: 448 VDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFR 507
           VDD GKFTEEA  FSGLDVLG+GNVAVVKYLDEQMS++MEE YEHKYPYDWRTKKPTIFR
Sbjct: 490 VDDGGKFTEEAAPFSGLDVLGEGNVAVVKYLDEQMSIVMEESYEHKYPYDWRTKKPTIFR 549

Query: 508 ATEQWFASVEGFRQAAMDAIGQVKWVPPQ 536
           ATEQWFASVEGFRQAAMDAIG VKW+PPQ
Sbjct: 550 ATEQWFASVEGFRQAAMDAIGHVKWIPPQ 578

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356564073|ref|XP_003550281.1| PREDICTED: isoleucyl-tRNA synthetase-like [Glycine max] Back     alignment and taxonomy information
>gi|222422851|dbj|BAH19412.1| AT5G49030 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449433407|ref|XP_004134489.1| PREDICTED: isoleucine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449513369|ref|XP_004164308.1| PREDICTED: isoleucine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297795625|ref|XP_002865697.1| hypothetical protein ARALYDRAFT_494966 [Arabidopsis lyrata subsp. lyrata] gi|297311532|gb|EFH41956.1| hypothetical protein ARALYDRAFT_494966 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|334188274|ref|NP_001190497.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana] gi|332008381|gb|AED95764.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|22327660|ref|NP_199714.2| isoleucyl-tRNA synthetase [Arabidopsis thaliana] gi|19424030|gb|AAL87306.1| putative isoleucyl-tRNA synthetase [Arabidopsis thaliana] gi|23296804|gb|AAN13174.1| putative isoleucyl-tRNA synthetase [Arabidopsis thaliana] gi|332008379|gb|AED95762.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225432320|ref|XP_002276207.1| PREDICTED: isoleucyl-tRNA synthetase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|79330394|ref|NP_001032042.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana] gi|332008380|gb|AED95763.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query881
TAIR|locus:21543491093 OVA2 "ovule abortion 2" [Arabi 0.391 0.315 0.714 0.0
TIGR_CMR|BA_4034 921 BA_4034 "isoleucyl-tRNA synthe 0.476 0.456 0.391 3.3e-117
UNIPROTKB|Q9KU47949 ileS "Isoleucine--tRNA ligase" 0.373 0.346 0.338 1.7e-111
TIGR_CMR|VC_0682949 VC_0682 "isoleucyl-tRNA synthe 0.373 0.346 0.338 1.7e-111
TIGR_CMR|CHY_0534 925 CHY_0534 "isoleucyl-tRNA synth 0.202 0.192 0.464 2.8e-108
TIGR_CMR|SO_3532940 SO_3532 "isoleucyl-tRNA synthe 0.312 0.292 0.345 4.9e-103
UNIPROTKB|F1P399 1000 IARS2 "Isoleucine--tRNA ligase 0.481 0.424 0.366 3.1e-101
UNIPROTKB|Q5ZKA2 1000 IARS2 "Isoleucine--tRNA ligase 0.481 0.424 0.366 3.9e-101
UNIPROTKB|F1P2C8 1011 IARS2 "Isoleucine--tRNA ligase 0.481 0.419 0.366 4e-101
DICTYBASE|DDB_G0293030 1034 mileS "isoleucyl-tRNA syntheta 0.179 0.152 0.5 1.1e-100
TAIR|locus:2154349 OVA2 "ovule abortion 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1320 (469.7 bits), Expect = 0., Sum P(3) = 0.
 Identities = 248/347 (71%), Positives = 291/347 (83%)

Query:   536 QEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNS 595
             ++AP YGADV+RLWVSSVDYTGDV+IGPQ+LRQMSDIYRKLRGTLRYLLGNLHDWRV N+
Sbjct:   745 KDAPAYGADVMRLWVSSVDYTGDVLIGPQILRQMSDIYRKLRGTLRYLLGNLHDWRVDNA 804

Query:   596 ISYDDLPMIDQYALFQLENIVKNIRESYESYXXXXXXXXXXXXXXVDLSNFYFDVAKDRL 655
             + Y DLP+IDQ+ALFQLEN+VKNI+E YE+Y              VDLSNFYFD+AKDRL
Sbjct:   805 VPYQDLPIIDQHALFQLENVVKNIQECYENYQFFKIFQIIQRFTIVDLSNFYFDIAKDRL 864

Query:   656 YTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFE 715
             YTGGT+SFTRRSCQTVLS HLLSI+RVIAPI+PHLAEDVWQNLPF Y  EDGSAAEFVFE
Sbjct:   865 YTGGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDVWQNLPFEYRNEDGSAAEFVFE 924

Query:   716 SKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSLEAKVYLFTDDAS 775
              KWP L+E+W +FP  ++ FW ++LELRTEVNKVLE+AR  K+IGSSLEAKVYL T DA 
Sbjct:   925 LKWPTLNEQWLSFPAEDVLFWQRLLELRTEVNKVLELARNEKMIGSSLEAKVYLHTADAG 984

Query:   776 LASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVS 835
             +A++L EM  AK++ADTLQRIFI SQVEVL S    +I ++ ++GEY VEG++KVWIGVS
Sbjct:   985 MAAKLLEMSEAKNEADTLQRIFITSQVEVLSSMEKEMISSVQHTGEY-VEGENKVWIGVS 1043

Query:   836 RAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLAVQPI-PSMAAVS 881
             RAEGSKCERCWNYS QVGSF +HPTLC RC+ V+   P  P++AAV+
Sbjct:  1044 RAEGSKCERCWNYSGQVGSFSDHPTLCGRCFSVIVANPPEPAVAAVN 1090
GO:0000166 "nucleotide binding" evidence=IEA
GO:0003824 "catalytic activity" evidence=IEA
GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA;ISS
GO:0004822 "isoleucine-tRNA ligase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM;IEA
GO:0006418 "tRNA aminoacylation for protein translation" evidence=IEA;ISS
GO:0006428 "isoleucyl-tRNA aminoacylation" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
GO:0048481 "ovule development" evidence=RCA;IMP
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009793 "embryo development ending in seed dormancy" evidence=RCA
GO:0010027 "thylakoid membrane organization" evidence=RCA
GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA
GO:0016117 "carotenoid biosynthetic process" evidence=RCA
GO:0016226 "iron-sulfur cluster assembly" evidence=RCA
TIGR_CMR|BA_4034 BA_4034 "isoleucyl-tRNA synthetase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KU47 ileS "Isoleucine--tRNA ligase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_0682 VC_0682 "isoleucyl-tRNA synthetase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_0534 CHY_0534 "isoleucyl-tRNA synthetase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|SO_3532 SO_3532 "isoleucyl-tRNA synthetase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|F1P399 IARS2 "Isoleucine--tRNA ligase, mitochondrial" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZKA2 IARS2 "Isoleucine--tRNA ligase, mitochondrial" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1P2C8 IARS2 "Isoleucine--tRNA ligase, mitochondrial" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0293030 mileS "isoleucyl-tRNA synthetase, mitochondrial" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer6.1.1.50.824
3rd Layer6.1.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query881
PLN02843 974 PLN02843, PLN02843, isoleucyl-tRNA synthetase 0.0
PLN02843974 PLN02843, PLN02843, isoleucyl-tRNA synthetase 0.0
PRK05743 912 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewe 0.0
COG0060 933 COG0060, IleS, Isoleucyl-tRNA synthetase [Translat 1e-165
TIGR00392861 TIGR00392, ileS, isoleucyl-tRNA synthetase 1e-148
PRK13804 961 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisi 1e-130
PRK05743912 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewe 1e-125
pfam00133606 pfam00133, tRNA-synt_1, tRNA synthetases class I ( 1e-116
PRK06039 975 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewe 1e-105
COG0060933 COG0060, IleS, Isoleucyl-tRNA synthetase [Translat 1e-89
PRK13804961 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisi 2e-77
cd07960180 cd07960, Anticodon_Ia_Ile_BEm, Anticodon-binding d 1e-73
cd00818338 cd00818, IleRS_core, catalytic core domain of isol 1e-58
TIGR00392861 TIGR00392, ileS, isoleucyl-tRNA synthetase 1e-49
PLN02882 1159 PLN02882, PLN02882, aminoacyl-tRNA ligase 4e-48
cd00668312 cd00668, Ile_Leu_Val_MetRS_core, catalytic core do 2e-34
pfam08264148 pfam08264, Anticodon_1, Anticodon-binding domain o 9e-34
TIGR00422861 TIGR00422, valS, valyl-tRNA synthetase 8e-25
COG0525877 COG0525, ValS, Valyl-tRNA synthetase [Translation, 1e-23
TIGR00422 861 TIGR00422, valS, valyl-tRNA synthetase 5e-22
cd00817382 cd00817, ValRS_core, catalytic core domain of valy 1e-21
PTZ00427 1205 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putati 8e-21
COG0525 877 COG0525, ValS, Valyl-tRNA synthetase [Translation, 1e-20
COG0525877 COG0525, ValS, Valyl-tRNA synthetase [Translation, 6e-20
PRK05729 874 PRK05729, valS, valyl-tRNA synthetase; Reviewed 5e-19
PRK13208800 PRK13208, valS, valyl-tRNA synthetase; Reviewed 9e-19
TIGR00422861 TIGR00422, valS, valyl-tRNA synthetase 4e-18
PTZ00427 1205 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putati 2e-17
PRK05729874 PRK05729, valS, valyl-tRNA synthetase; Reviewed 1e-15
COG0495814 COG0495, LeuS, Leucyl-tRNA synthetase [Translation 2e-15
PRK14900 1052 PRK14900, valS, valyl-tRNA synthetase; Provisional 3e-15
cd07961183 cd07961, Anticodon_Ia_Ile_ABEc, Anticodon-binding 2e-14
cd07962135 cd07962, Anticodon_Ia_Val, Anticodon-binding domai 2e-14
cd00812314 cd00812, LeuRS_core, catalytic core domain of leuc 4e-14
PRK13208800 PRK13208, valS, valyl-tRNA synthetase; Reviewed 5e-14
pfam09334388 pfam09334, tRNA-synt_1g, tRNA synthetases class I 2e-13
PRK06039975 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewe 4e-13
TIGR00398530 TIGR00398, metG, methionyl-tRNA synthetase 4e-13
cd00814319 cd00814, MetRS_core, catalytic core domain of meth 1e-12
TIGR00396842 TIGR00396, leuS_bact, leucyl-tRNA synthetase, euba 3e-12
COG0143558 COG0143, MetG, Methionyl-tRNA synthetase [Translat 9e-12
PLN02381 1066 PLN02381, PLN02381, valyl-tRNA synthetase 2e-11
PLN02943 958 PLN02943, PLN02943, aminoacyl-tRNA ligase 3e-11
PRK05729 874 PRK05729, valS, valyl-tRNA synthetase; Reviewed 5e-11
PRK14900 1052 PRK14900, valS, valyl-tRNA synthetase; Provisional 1e-10
PTZ00419 995 PTZ00419, PTZ00419, valyl-tRNA synthetase-like pro 1e-10
PRK00390805 PRK00390, leuS, leucyl-tRNA synthetase; Validated 2e-10
PTZ00419995 PTZ00419, PTZ00419, valyl-tRNA synthetase-like pro 6e-10
PRK13208800 PRK13208, valS, valyl-tRNA synthetase; Reviewed 7e-10
PLN02943958 PLN02943, PLN02943, aminoacyl-tRNA ligase 2e-09
TIGR00395 938 TIGR00395, leuS_arch, leucyl-tRNA synthetase, arch 2e-09
pfam0682730 pfam06827, zf-FPG_IleRS, Zinc finger found in FPG 3e-09
cd00818338 cd00818, IleRS_core, catalytic core domain of isol 6e-09
PRK12268556 PRK12268, PRK12268, methionyl-tRNA synthetase; Rev 6e-09
pfam13603178 pfam13603, tRNA-synt_1_2, Leucyl-tRNA synthetase, 8e-09
PLN02563 963 PLN02563, PLN02563, aminoacyl-tRNA ligase 1e-08
PRK12267648 PRK12267, PRK12267, methionyl-tRNA synthetase; Rev 6e-08
PRK00390805 PRK00390, leuS, leucyl-tRNA synthetase; Validated 7e-08
PRK11893511 PRK11893, PRK11893, methionyl-tRNA synthetase; Rev 1e-07
PRK00133673 PRK00133, metG, methionyl-tRNA synthetase; Reviewe 1e-07
PRK12300897 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed 2e-07
COG0495814 COG0495, LeuS, Leucyl-tRNA synthetase [Translation 6e-07
PLN02943 958 PLN02943, PLN02943, aminoacyl-tRNA ligase 8e-07
cd07375117 cd07375, Anticodon_Ia_like, Anticodon-binding doma 2e-06
TIGR00395938 TIGR00395, leuS_arch, leucyl-tRNA synthetase, arch 6e-06
PTZ00419 995 PTZ00419, PTZ00419, valyl-tRNA synthetase-like pro 1e-05
cd07957129 cd07957, Anticodon_Ia_Met, Anticodon-binding domai 1e-05
PRK14900 1052 PRK14900, valS, valyl-tRNA synthetase; Provisional 4e-05
PRK00390805 PRK00390, leuS, leucyl-tRNA synthetase; Validated 5e-05
TIGR00396842 TIGR00396, leuS_bact, leucyl-tRNA synthetase, euba 7e-05
PRK12300 897 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed 1e-04
cd00802143 cd00802, class_I_aaRS_core, catalytic core domain 3e-04
COG0495814 COG0495, LeuS, Leucyl-tRNA synthetase [Translation 7e-04
PLN02882 1159 PLN02882, PLN02882, aminoacyl-tRNA ligase 0.001
PLN02959 1084 PLN02959, PLN02959, aminoacyl-tRNA ligase 0.001
cd07959117 cd07959, Anticodon_Ia_Leu_AEc, Anticodon-binding d 0.002
PLN02563963 PLN02563, PLN02563, aminoacyl-tRNA ligase 0.003
COG0143558 COG0143, MetG, Methionyl-tRNA synthetase [Translat 0.004
>gnl|CDD|215452 PLN02843, PLN02843, isoleucyl-tRNA synthetase Back     alignment and domain information 
 Score =  834 bits (2156), Expect = 0.0
 Identities = 318/454 (70%), Positives = 363/454 (79%), Gaps = 36/454 (7%)

Query: 119 MRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDI 178
           MRAN++ REPEI KLW+++QV+ RV+D+N+GE+F LHDGPPYANG+LH+GHALNKILKD 
Sbjct: 1   MRANSVTREPEIQKLWEENQVYKRVSDRNNGESFTLHDGPPYANGDLHIGHALNKILKDF 60

Query: 179 INRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKA 238
           INRY+LLQ  KV YVPGWDCHGLPIELKVLQSLD++A+K+LTP KLRAKAAKFAK TV  
Sbjct: 61  INRYQLLQGKKVHYVPGWDCHGLPIELKVLQSLDQEARKELTPIKLRAKAAKFAKKTVDT 120

Query: 239 QMASFKRYGVWADWNNPYLTLDPEYEAAQ------------------------------- 267
           Q  SFKRYGVW DW NPYLTLDPEYEAAQ                               
Sbjct: 121 QRESFKRYGVWGDWENPYLTLDPEYEAAQIEVFGQMFLNGYIYRGRKPVHWSPSSRTALA 180

Query: 268 -----YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVN 322
                YPEGHVS+SIY  F +VS   ++   L EFLP L LA+WTTTPWT+PANAAVAVN
Sbjct: 181 EAELEYPEGHVSKSIYVAFPVVSPSETSPEELEEFLPGLSLAIWTTTPWTMPANAAVAVN 240

Query: 323 AKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVI 382
            KLQY+VVE+QS  E +S +  NKK RPGNVLK+Q+K+F+IVA+DLVP LEAKWG KLV+
Sbjct: 241 DKLQYSVVEVQSFSEDESTSGGNKKKRPGNVLKEQQKLFLIVATDLVPALEAKWGVKLVV 300

Query: 383 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 442
            KT  GSDLE CRY+HP+ NR+ PVVIGGDYITTESGTGLVHTAPGHGQEDY+T LKYGL
Sbjct: 301 LKTFPGSDLEGCRYIHPLYNRESPVVIGGDYITTESGTGLVHTAPGHGQEDYITGLKYGL 360

Query: 443 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 502
           P+LSPVDD GKFTEEAG+FSGL VLG+GN AVV+ LDE  SL+MEE Y HKYPYDWRTKK
Sbjct: 361 PLLSPVDDAGKFTEEAGQFSGLSVLGEGNAAVVEALDEAGSLLMEEAYGHKYPYDWRTKK 420

Query: 503 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 536
           PTIFRATEQWFASVEGFRQAA+DAI +VKW+P Q
Sbjct: 421 PTIFRATEQWFASVEGFRQAALDAIDKVKWIPAQ 454

Length = 974
>gnl|CDD|215452 PLN02843, PLN02843, isoleucyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|235588 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|223138 COG0060, IleS, Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|232953 TIGR00392, ileS, isoleucyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|237514 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235588 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|215739 pfam00133, tRNA-synt_1, tRNA synthetases class I (I, L, M and V) Back     alignment and domain information
>gnl|CDD|235681 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|223138 COG0060, IleS, Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|237514 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|153414 cd07960, Anticodon_Ia_Ile_BEm, Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|173909 cd00818, IleRS_core, catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|232953 TIGR00392, ileS, isoleucyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|215477 PLN02882, PLN02882, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|185674 cd00668, Ile_Leu_Val_MetRS_core, catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|219767 pfam08264, Anticodon_1, Anticodon-binding domain of tRNA Back     alignment and domain information
>gnl|CDD|232969 TIGR00422, valS, valyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|223599 COG0525, ValS, Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|232969 TIGR00422, valS, valyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|185677 cd00817, ValRS_core, catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|173617 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>gnl|CDD|223599 COG0525, ValS, Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|223599 COG0525, ValS, Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237306 PRK13208, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|232969 TIGR00422, valS, valyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|173617 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>gnl|CDD|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|223569 COG0495, LeuS, Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|237855 PRK14900, valS, valyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|153415 cd07961, Anticodon_Ia_Ile_ABEc, Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|153416 cd07962, Anticodon_Ia_Val, Anticodon-binding domain of valyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|173906 cd00812, LeuRS_core, catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|237306 PRK13208, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|220185 pfam09334, tRNA-synt_1g, tRNA synthetases class I (M) Back     alignment and domain information
>gnl|CDD|235681 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|232957 TIGR00398, metG, methionyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|173907 cd00814, MetRS_core, catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|232956 TIGR00396, leuS_bact, leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>gnl|CDD|223221 COG0143, MetG, Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|215214 PLN02381, PLN02381, valyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|215509 PLN02943, PLN02943, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237855 PRK14900, valS, valyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|240411 PTZ00419, PTZ00419, valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|234743 PRK00390, leuS, leucyl-tRNA synthetase; Validated Back     alignment and domain information
>gnl|CDD|240411 PTZ00419, PTZ00419, valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|237306 PRK13208, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|215509 PLN02943, PLN02943, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|232955 TIGR00395, leuS_arch, leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>gnl|CDD|203527 pfam06827, zf-FPG_IleRS, Zinc finger found in FPG and IleRS Back     alignment and domain information
>gnl|CDD|173909 cd00818, IleRS_core, catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|237029 PRK12268, PRK12268, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|222257 pfam13603, tRNA-synt_1_2, Leucyl-tRNA synthetase, Domain 2 Back     alignment and domain information
>gnl|CDD|178177 PLN02563, PLN02563, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|237028 PRK12267, PRK12267, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|234743 PRK00390, leuS, leucyl-tRNA synthetase; Validated Back     alignment and domain information
>gnl|CDD|237012 PRK11893, PRK11893, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|234655 PRK00133, metG, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237049 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|223569 COG0495, LeuS, Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|215509 PLN02943, PLN02943, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|153408 cd07375, Anticodon_Ia_like, Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains Back     alignment and domain information
>gnl|CDD|232955 TIGR00395, leuS_arch, leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>gnl|CDD|240411 PTZ00419, PTZ00419, valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|153411 cd07957, Anticodon_Ia_Met, Anticodon-binding domain of methionyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|237855 PRK14900, valS, valyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|234743 PRK00390, leuS, leucyl-tRNA synthetase; Validated Back     alignment and domain information
>gnl|CDD|232956 TIGR00396, leuS_bact, leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>gnl|CDD|237049 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|173901 cd00802, class_I_aaRS_core, catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|223569 COG0495, LeuS, Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|215477 PLN02882, PLN02882, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|215518 PLN02959, PLN02959, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|153413 cd07959, Anticodon_Ia_Leu_AEc, Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|178177 PLN02563, PLN02563, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|223221 COG0143, MetG, Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 881
COG0060933 IleS Isoleucyl-tRNA synthetase [Translation, ribos 100.0
PRK13804961 ileS isoleucyl-tRNA synthetase; Provisional 100.0
PLN02843974 isoleucyl-tRNA synthetase 100.0
PRK05743912 ileS isoleucyl-tRNA synthetase; Reviewed 100.0
KOG0433937 consensus Isoleucyl-tRNA synthetase [Translation, 100.0
PLN02882 1159 aminoacyl-tRNA ligase 100.0
PTZ00427 1205 isoleucine-tRNA ligase, putative; Provisional 100.0
PRK06039975 ileS isoleucyl-tRNA synthetase; Reviewed 100.0
TIGR00392861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 100.0
COG0525877 ValS Valyl-tRNA synthetase [Translation, ribosomal 100.0
PRK05729874 valS valyl-tRNA synthetase; Reviewed 100.0
PLN023811066 valyl-tRNA synthetase 100.0
PTZ00419995 valyl-tRNA synthetase-like protein; Provisional 100.0
PLN02943958 aminoacyl-tRNA ligase 100.0
PRK14900 1052 valS valyl-tRNA synthetase; Provisional 100.0
TIGR00422861 valS valyl-tRNA synthetase. The valyl-tRNA synthet 100.0
PRK13208800 valS valyl-tRNA synthetase; Reviewed 100.0
PLN029591084 aminoacyl-tRNA ligase 100.0
TIGR00395938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 100.0
KOG0434 1070 consensus Isoleucyl-tRNA synthetase [Translation, 100.0
KOG0432995 consensus Valyl-tRNA synthetase [Translation, ribo 100.0
PRK12300897 leuS leucyl-tRNA synthetase; Reviewed 100.0
PF00133601 tRNA-synt_1: tRNA synthetases class I (I, L, M and 100.0
PRK00390805 leuS leucyl-tRNA synthetase; Validated 100.0
TIGR00396842 leuS_bact leucyl-tRNA synthetase, eubacterial and 100.0
PLN02563963 aminoacyl-tRNA ligase 100.0
COG0495814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 100.0
KOG0435876 consensus Leucyl-tRNA synthetase [Translation, rib 100.0
KOG04371080 consensus Leucyl-tRNA synthetase [Translation, rib 100.0
PRK12268556 methionyl-tRNA synthetase; Reviewed 100.0
TIGR00398530 metG methionyl-tRNA synthetase. The methionyl-tRNA 100.0
PLN02224616 methionine-tRNA ligase 100.0
PLN02610801 probable methionyl-tRNA synthetase 100.0
PRK12267648 methionyl-tRNA synthetase; Reviewed 100.0
PRK00133673 metG methionyl-tRNA synthetase; Reviewed 100.0
PRK11893511 methionyl-tRNA synthetase; Reviewed 100.0
COG0143558 MetG Methionyl-tRNA synthetase [Translation, ribos 100.0
KOG0436578 consensus Methionyl-tRNA synthetase [Translation, 100.0
cd00817382 ValRS_core catalytic core domain of valyl-tRNA syn 100.0
cd00818338 IleRS_core catalytic core domain of isoleucyl-tRNA 99.98
cd07960180 Anticodon_Ia_Ile_BEm Anticodon-binding domain of b 99.96
cd07961183 Anticodon_Ia_Ile_ABEc Anticodon-binding domain of 99.95
cd00668312 Ile_Leu_Val_MetRS_core catalytic core domain of is 99.93
PF09334391 tRNA-synt_1g: tRNA synthetases class I (M); InterP 99.93
cd00814319 MetRS_core catalytic core domain of methioninyl-tR 99.92
PRK00260463 cysS cysteinyl-tRNA synthetase; Validated 99.92
PF08264153 Anticodon_1: Anticodon-binding domain of tRNA; Int 99.9
PTZ00399651 cysteinyl-tRNA-synthetase; Provisional 99.89
cd00812314 LeuRS_core catalytic core domain of leucyl-tRNA sy 99.88
TIGR00435465 cysS cysteinyl-tRNA synthetase. This model finds t 99.81
KOG1247567 consensus Methionyl-tRNA synthetase [Translation, 99.81
PF13603185 tRNA-synt_1_2: Leucyl-tRNA synthetase, Domain 2; P 99.8
TIGR03447411 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino- 99.8
PLN02946557 cysteine-tRNA ligase 99.78
PRK12418384 cysteinyl-tRNA synthetase; Provisional 99.78
PRK14535699 cysS cysteinyl-tRNA synthetase; Provisional 99.75
PRK14536490 cysS cysteinyl-tRNA synthetase; Provisional 99.74
PRK01611507 argS arginyl-tRNA synthetase; Reviewed 99.72
cd07962135 Anticodon_Ia_Val Anticodon-binding domain of valyl 99.71
cd07959117 Anticodon_Ia_Leu_AEc Anticodon-binding domain of a 99.66
cd00672213 CysRS_core catalytic core domain of cysteinyl tRNA 99.65
cd07957129 Anticodon_Ia_Met Anticodon-binding domain of methi 99.62
PRK14534481 cysS cysteinyl-tRNA synthetase; Provisional 99.57
cd07958117 Anticodon_Ia_Leu_BEm Anticodon-binding domain of b 99.54
TIGR00456566 argS arginyl-tRNA synthetase. This model recognize 99.37
cd00674353 LysRS_core_class_I catalytic core domain of class 99.35
cd00671212 ArgRS_core catalytic core domain of arginyl-tRNA s 99.35
cd07375117 Anticodon_Ia_like Anticodon-binding domain of clas 99.27
COG0215464 CysS Cysteinyl-tRNA synthetase [Translation, ribos 99.22
cd00802143 class_I_aaRS_core catalytic core domain of class I 99.19
PRK00750510 lysK lysyl-tRNA synthetase; Reviewed 99.0
KOG2007586 consensus Cysteinyl-tRNA synthetase [Translation, 98.92
PRK12451562 arginyl-tRNA synthetase; Reviewed 98.72
COG0018577 ArgS Arginyl-tRNA synthetase [Translation, ribosom 98.62
TIGR00467515 lysS_arch lysyl-tRNA synthetase, archaeal and spir 98.6
PF01406300 tRNA-synt_1e: tRNA synthetases class I (C) catalyt 98.03
PF0682730 zf-FPG_IleRS: Zinc finger found in FPG and IleRS; 98.01
PF00750354 tRNA-synt_1d: tRNA synthetases class I (R); InterP 97.58
PLN02286576 arginine-tRNA ligase 97.38
cd09287240 GluRS_non_core catalytic core domain of non-discri 97.02
TIGR00463560 gltX_arch glutamyl-tRNA synthetase, archaeal and e 96.63
PRK04156567 gltX glutamyl-tRNA synthetase; Provisional 96.51
PLN03233523 putative glutamate-tRNA ligase; Provisional 96.47
TIGR03838272 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthe 96.33
PF00749314 tRNA-synt_1c: tRNA synthetases class I (E and Q), 96.28
PLN02907722 glutamate-tRNA ligase 96.27
cd00418230 GlxRS_core catalytic core domain of glutamyl-tRNA 96.24
PTZ00402601 glutamyl-tRNA synthetase; Provisional 96.22
cd00807238 GlnRS_core catalytic core domain of glutaminyl-tRN 96.12
PTZ00437574 glutaminyl-tRNA synthetase; Provisional 95.99
COG0008472 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr 95.9
TIGR00440522 glnS glutaminyl-tRNA synthetase. This protein is a 95.85
PLN02859788 glutamine-tRNA ligase 95.76
TIGR00464470 gltX_bact glutamyl-tRNA synthetase, bacterial fami 95.65
PRK14895513 gltX glutamyl-tRNA synthetase; Provisional 95.65
PRK05347554 glutaminyl-tRNA synthetase; Provisional 95.61
cd00808239 GluRS_core catalytic core domain of discriminating 95.45
PRK12410433 glutamylglutaminyl-tRNA synthetase; Provisional 95.34
PRK05710299 glutamyl-Q tRNA(Asp) synthetase; Reviewed 95.33
PRK14703771 glutaminyl-tRNA synthetase/YqeY domain fusion prot 95.24
PRK12558445 glutamyl-tRNA synthetase; Provisional 95.03
cd00668312 Ile_Leu_Val_MetRS_core catalytic core domain of is 94.88
PLN02627535 glutamyl-tRNA synthetase 94.72
PRK01406476 gltX glutamyl-tRNA synthetase; Reviewed 93.84
PF01921360 tRNA-synt_1f: tRNA synthetases class I (K); InterP 93.4
PRK12267 648 methionyl-tRNA synthetase; Reviewed 92.51
COG1384521 LysS Lysyl-tRNA synthetase (class I) [Translation, 91.25
cd07956156 Anticodon_Ia_Arg Anticodon-binding domain of argin 90.96
KOG1195567 consensus Arginyl-tRNA synthetase [Translation, ri 84.08
PRK12285368 tryptophanyl-tRNA synthetase; Reviewed 82.6
>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information 
Probab=100.00  E-value=4.3e-164  Score=1454.00  Aligned_cols=711  Identities=45%  Similarity=0.797  Sum_probs=644.3

Q ss_pred             cCccccccCCCCCCCCCCCccccchHHHHHHHhCCCcccccc--CCCCCceEEecCCCCCCCcccchHHHHHHHHHHHHH
Q 002784          104 GRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVAD--KNDGENFVLHDGPPYANGNLHMGHALNKILKDIINR  181 (881)
Q Consensus       104 ~~~~~tl~lp~t~f~~r~n~~~~E~~~~~~W~~~~~y~~~~~--~~~~~~f~i~dgPPYaNG~lHiGHaln~ilkDii~R  181 (881)
                      ++|++|||||+|.||||+|++++|++++++|+++++|++..+  +.++++|++|||||||||.+|||||+|+||||||.|
T Consensus         1 ~~~k~tl~lp~T~fpmr~~l~~~E~~i~~~W~e~~iy~k~~~~~~~g~~~FvfhDGPPyANG~iHiGHalnKilKDiI~R   80 (933)
T COG0060           1 MDYKDTLNLPKTDFPMRANLPKKEPKILKFWEENDIYEKIREERNKGKPKFVLHDGPPYANGNIHIGHALNKILKDIIVR   80 (933)
T ss_pred             CCccccccCccCCCCccCChhhcCHHHHHHHHHhhHHHHHHHHHhCCCCcEEEeCCCCCCCCCcchhhhHHHhhhhhhhh
Confidence            368999999999999999999999999999999999999873  457899999999999999999999999999999999


Q ss_pred             HHHhCCCeeeeccCcCCCCcHHHHHHHHhcccc--cccCCChHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCccCC
Q 002784          182 YKLLQNYKVRYVPGWDCHGLPIELKVLQSLDED--AKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTL  259 (881)
Q Consensus       182 y~rm~G~~V~~~pGwD~hGLPiE~~a~k~l~~~--~~~~~~p~~~~~~~~~~a~~~i~~~~~~f~rlGi~~DW~~~y~T~  259 (881)
                      |++|+||+|.|+|||||||||||.+++++++..  ...+++.++|+++|++||.++++.|+++|+|||+++||+++|.||
T Consensus        81 y~~m~G~~v~~~pGWDcHGLPIE~~vek~lg~~k~~i~~~~~~efr~~Cr~~a~~~v~~q~~~f~RLGv~~Dw~npY~Tm  160 (933)
T COG0060          81 YKTMQGYDVPYVPGWDCHGLPIELKVEKKLGIGKKDIESFGVEEFREKCREFALEQVDEQKEQFKRLGVWGDWENPYKTM  160 (933)
T ss_pred             hhcccCCcCCCCCCCcCCCchHHHHHHHHhCCCcchhhhcCHHHHHHHHHHHHHHHHHHHHHHHHhheEeeccCCCeecC
Confidence            999999999999999999999999999999852  234578899999999999999999999999999999999999999


Q ss_pred             ccchhhce------------------------------------ecCCceeceeeeEeeecCCCCCcccccccccCCceE
Q 002784          260 DPEYEAAQ------------------------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGL  303 (881)
Q Consensus       260 dp~y~~~q------------------------------------Y~~g~~s~siy~~f~~~~~~~~~~~~l~~~~~~~~l  303 (881)
                      |++|++.|                                    |.+ +.|+|+||+|++.+..         ...+.++
T Consensus       161 d~~ye~~~~~~f~~~~~kGllyrg~Kpv~wsp~c~TaLAeaEvey~d-~~dpSIyV~F~v~~~~---------~~~~~~l  230 (933)
T COG0060         161 DPSYEESVWWAFKELYEKGLLYRGYKPVPWSPRCETALAEAEVEYGD-VKDPSIYVKFPVKDEG---------LDENAYL  230 (933)
T ss_pred             CHHHHHHHHHHHHHHHHCCCeecCCeeeeecCCCCcchhhhhhcccc-cCCceEEEEEEeccCC---------CCCCcEE
Confidence            99999986                                    434 7788888888887530         1257899


Q ss_pred             EEecCccccccccceeeeCCCCcEEEEEEcccccCCCCCcccCCCCCCCcccCCCceEEEEeccchHHHHHHhCCc-eEE
Q 002784          304 AVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVI  382 (881)
Q Consensus       304 ~iwTTtPwTl~an~av~v~p~~~Y~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iva~~~~~~l~~~~~~~-~~i  382 (881)
                      +||||||||||||.||+||||.+|++|+.+                         ++.||+|+++++++.+..|.+ +++
T Consensus       231 viWTTTPWTLPaN~aiav~pd~~Y~lv~~~-------------------------~~~~IlA~~lve~~~~~~~~~~~~v  285 (933)
T COG0060         231 VIWTTTPWTLPANLAIAVHPDLDYVLVEVN-------------------------GEKLILAKALVESVAKKAGVEDYEV  285 (933)
T ss_pred             EEEeCCCCCchhcceeEeCCCcceEEEEEC-------------------------CEEEEEhHHHHHHHHHHcCCcceEE
Confidence            999999999999999999999999999986                         589999999999999999887 899


Q ss_pred             EEecccccccCCEeecCCCC----CCcceeecCccccccCCCCceecCCCCChhHHHHHHHhC-CCceeccCCCCccccc
Q 002784          383 KKTLAGSDLENCRYVHPVDN----RQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG-LPILSPVDDEGKFTEE  457 (881)
Q Consensus       383 ~~~~~G~~L~g~~~~~Pl~~----~~~pi~i~~~~V~~~~GTG~Vh~aPaHg~~Dy~~~~k~g-L~~~~~vd~~G~~~~~  457 (881)
                      +.+++|++|+|+.|.|||..    +..|| +.+|||+.+.|||+||+|||||+|||.+|+++| +|+++|||++|+|+++
T Consensus       286 l~~~kG~~Leg~~y~hPf~~~~~~~~~~v-~~gd~VT~d~GTG~VHtAPghGeeDy~vg~~~g~l~v~~pVD~~G~yt~~  364 (933)
T COG0060         286 LETFKGSELEGLRYEHPFYDFVYDRAFPV-ILGDHVTLDDGTGLVHTAPGHGEEDYEVGKKYGLLEVLNPVDDNGRYTEE  364 (933)
T ss_pred             eEEeehhhhCCCEeeCCcccccccceeeE-EecCeEecCCCccceecCCCCCHHHHHHHHHcCCcCCccccCCCcccccc
Confidence            99999999999999999995    78898 679999999999999999999999999999999 7999999999999999


Q ss_pred             cccCCCceeccchhHHHHHHHHhcCCccceeccccccccccCCCCCeEEeeccccccchhhHHHHHHHhhccccccCCC-
Q 002784          458 AGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ-  536 (881)
Q Consensus       458 ~~~~~G~~v~~~a~~~ii~~L~~~g~l~~~~~~~h~yp~~wRt~~Pii~r~t~QWFi~~~~lk~~al~~i~~v~~~P~~-  536 (881)
                      ++.|.|+.| ++||+.||+.|+++|.|++.+.|.|+||||||||+|||||+|+|||++|+++|+++++++++|+|+|++ 
T Consensus       365 ~~~~~G~~v-~dAn~~Ii~~Lk~~g~Ll~~e~i~HsYPhcWR~ktPlIyRAt~QWFi~v~~~r~~~l~~i~~v~w~P~~~  443 (933)
T COG0060         365 APKYEGLFV-KDANKKIIEDLKEKGNLLKSEKIEHSYPHCWRTKTPLIYRATPQWFVSVDKLRDKMLKEINKVNWVPDWG  443 (933)
T ss_pred             chhhCCcee-ccCCHHHHHHHHhCCceeeeeeEEeCCCcccCCCCeeEEeecchheeEHHHHHHHHHHHHhcceEEChhH
Confidence            999999999 599999999999999999999999999999999999999999999999999999999999999999999 


Q ss_pred             --------------------------------------------------------------------------------
Q 002784          537 --------------------------------------------------------------------------------  536 (881)
Q Consensus       537 --------------------------------------------------------------------------------  536 (881)
                                                                                                      
T Consensus       444 ~~R~~~mve~r~DW~ISRQR~WGvPiPi~~~~~~g~~~~~~~El~e~~~~~~~~~g~~~w~~~~idel~~~~~~~g~~~~  523 (933)
T COG0060         444 KNRFGNMVENRPDWCISRQRYWGVPIPVWYCKETGEILVITEELEELVGQLVEEKGIDDWHRPDIDELLPPCPEDGKEYR  523 (933)
T ss_pred             HHHHHHHHcCCCcceeeccccCCCceeEEEECCCCCeeccHHHHHHHHHHHhhhcCchhhhccchHhhcCCCCCCcceeE
Confidence                                                                                            


Q ss_pred             --------------------------------------------------------------------------------
Q 002784          537 --------------------------------------------------------------------------------  536 (881)
Q Consensus       537 --------------------------------------------------------------------------------  536 (881)
                                                                                                      
T Consensus       524 rv~DvlDVWFDSGs~~~a~~~~~~~~~~~~~~aD~~lEGsDQ~RGWF~Ssl~~s~a~~~~aPYk~vltHGfvlDe~GrKM  603 (933)
T COG0060         524 RVPDVLDVWFDSGSTPYAVLHPRENLKFPALFADFYLEGSDQTRGWFYSSLLTSTALFGRAPYKNVLTHGFVLDEKGRKM  603 (933)
T ss_pred             ecCcceEEEEcCCCCcccccCCcccccCccccCcEEEEeccccchhHHHHHHHHHHHcCCchHHHHhhcccEECCCCCCc
Confidence                                                                                            


Q ss_pred             ------------CCCCCCCchHhHHhhhcCCCCceecChhHHHHHHHHHHHHhhHHHHHHhcccCCCCC-CccCCCCCCH
Q 002784          537 ------------EAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPM  603 (881)
Q Consensus       537 ------------~~~~yGaD~LRlwvas~~~~~D~~~s~~~l~~~~~~~~Kl~Nt~rf~l~nl~~f~~~-~~~~~~~l~~  603 (881)
                                  ++.+||||+||||++++++++|+.||+++++++.+.|++||||+||+++||++|+|. +.++..++..
T Consensus       604 SKSlGN~v~P~~V~~~yGADiLRLwv~ssd~~~dl~~s~~il~~~~~~~r~irNt~rF~l~nl~~fdp~~~~~~~~~~~~  683 (933)
T COG0060         604 SKSLGNVVDPQDVIDKYGADILRLWVASSDYWEDLRFSDEILKQVREVYRKIRNTYRFLLGNLDDFDPKKDAVLPEELRE  683 (933)
T ss_pred             cccCCCcCCHHHHHHhhCchheeeeeeecCchhccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccccchhhcch
Confidence                        235999999999999999999999999999999999999999999999999999997 3466678899


Q ss_pred             hHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHhhHHHHHHhhccccCCCCChHHHHHHHHHHHHHHHHHHHHh
Q 002784          604 IDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVI  683 (881)
Q Consensus       604 ~Dr~il~~l~~li~~v~~~ye~y~f~~a~~~i~~F~~~~ls~~Yl~~~KdrLy~~~~~~~~r~s~q~vL~~il~~l~~lL  683 (881)
                      +|||||++|++++++++++|++|+|+++++.+++|++++||+|||+++|||+|++..++.+|+++|++|+++|.+++++|
T Consensus       684 ~Drwil~rl~~l~~~v~eaye~y~f~~v~~~l~~F~~~dLS~~Yld~~kdr~y~~~~~s~~rraa~~~Ly~il~~l~~~l  763 (933)
T COG0060         684 LDRWILSRLNSLVKEVREAYENYDFHKVVRALMNFVSEDLSNWYLDIIKDRLYTEAADSPDRRAAQTTLYHILKALVRLL  763 (933)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcccchhHHHHHHhCCccccccCCCCCcceeecCCCCcchhcCCCChhhHHHHHHHHHHHHHHHHHHHHHhhcCcCCCCc
Q 002784          684 APILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLEVARTGKLIGSSL  763 (881)
Q Consensus       684 aPilP~~aEEiw~~L~~~~~~~~~~~~~sV~~~~wP~~~~~~~~~~~~~~~~~~~l~~lr~~v~~~le~~R~~k~i~~sl  763 (881)
                      |||+||+|||||++|+..      ...+|||+.+||..++.+.+.+......|+.++++|..|+++++.+|.++.||.++
T Consensus       764 APilPftaEeiw~~l~~~------~~~eSVhl~~~p~~~~~~~~~~~~~~~r~~~~~k~R~~v~~~l~~~r~~~~I~~~l  837 (933)
T COG0060         764 APILPFTAEEIWQNLPGE------RKEESVHLEDWPEVDEELIDVEAALAARWEALLKLRDPVNKALEAARLEKVIGSSL  837 (933)
T ss_pred             cccchhhHHHHHHhCccC------CCCceeEeccCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhcc
Confidence            999999999999999764      11479999999998887765446677889999999999999999999999999999


Q ss_pred             ceEEEEEeCChHHHHHHHHhhccCCchhHhhhhhhccceEEccCCCCCCccCCCCCCcccccCCccEEEEEEeCCCCCCC
Q 002784          764 EAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNGLIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCE  843 (881)
Q Consensus       764 e~~v~I~~~~~~~~~~l~~l~~~~~~~~~L~~l~~vS~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~a~~~KC~  843 (881)
                      +++++++.++   ...+..+      ..+|..+|++|.+.+....+......  ......+  .. +.+.+.+++|.||+
T Consensus       838 nak~~~~~~~---~~~~~~~------~~~l~~~~~~s~~~v~~~~~~~~~~~--~~~~~~~--~~-~~~~~~~~eg~~c~  903 (933)
T COG0060         838 NAKVVIYTED---SELLYKL------KPNLGKVLITSAVEVAKALEALAGAE--AEELVDG--DG-VELTVEKAEGEKCP  903 (933)
T ss_pred             eeEEEEeecc---hhhhhhh------chhHHHHHhhhHHHHHhhhccccchh--hhhhhcc--cc-eeEEEEeccCCcCC
Confidence            9999999865   2223333      24699999999888765321111000  0000000  11 78899999999999


Q ss_pred             CccceecCCCCCCCCCCCChhhHHHhcc
Q 002784          844 RCWNYSTQVGSFVEHPTLCSRCYEVLAV  871 (881)
Q Consensus       844 RCW~~~~~v~~~~~~~~lC~RC~~vl~~  871 (881)
                      |||+|..++|....++.||.||+.+|..
T Consensus       904 r~~~~~~~~~~~~~~e~l~~~~v~~iq~  931 (933)
T COG0060         904 RCWHYDTELGEELEEEGLCRRCVRRIQE  931 (933)
T ss_pred             eEEEEcCcCCcccccchHHHHHHHHHhh
Confidence            9999999999999999999999999863

>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG0433 consensus Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02882 aminoacyl-tRNA ligase Back     alignment and domain information
>PTZ00427 isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK05729 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02381 valyl-tRNA synthetase Back     alignment and domain information
>PTZ00419 valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00422 valS valyl-tRNA synthetase Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02959 aminoacyl-tRNA ligase Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>KOG0434 consensus Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0432 consensus Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK00390 leuS leucyl-tRNA synthetase; Validated Back     alignment and domain information
>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0435 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0437 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12268 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00398 metG methionyl-tRNA synthetase Back     alignment and domain information
>PLN02224 methionine-tRNA ligase Back     alignment and domain information
>PLN02610 probable methionyl-tRNA synthetase Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK00133 metG methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0436 consensus Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>cd07960 Anticodon_Ia_Ile_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases Back     alignment and domain information
>cd07961 Anticodon_Ia_Ile_ABEc Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA synthetases Back     alignment and domain information
>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>PRK00260 cysS cysteinyl-tRNA synthetase; Validated Back     alignment and domain information
>PF08264 Anticodon_1: Anticodon-binding domain of tRNA; InterPro: IPR013155 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PTZ00399 cysteinyl-tRNA-synthetase; Provisional Back     alignment and domain information
>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>TIGR00435 cysS cysteinyl-tRNA synthetase Back     alignment and domain information
>KOG1247 consensus Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF13603 tRNA-synt_1_2: Leucyl-tRNA synthetase, Domain 2; PDB: 2AJH_B 4ARI_A 2AJG_B 4AQ7_D 2AJI_B 4ARC_A 4AS1_A 2BTE_A 2V0G_A 2BYT_A Back     alignment and domain information
>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase Back     alignment and domain information
>PLN02946 cysteine-tRNA ligase Back     alignment and domain information
>PRK12418 cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14535 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14536 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK01611 argS arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd07962 Anticodon_Ia_Val Anticodon-binding domain of valyl tRNA synthetases Back     alignment and domain information
>cd07959 Anticodon_Ia_Leu_AEc Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases Back     alignment and domain information
>cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase Back     alignment and domain information
>cd07957 Anticodon_Ia_Met Anticodon-binding domain of methionyl tRNA synthetases Back     alignment and domain information
>PRK14534 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd07958 Anticodon_Ia_Leu_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases Back     alignment and domain information
>TIGR00456 argS arginyl-tRNA synthetase Back     alignment and domain information
>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase Back     alignment and domain information
>cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>cd07375 Anticodon_Ia_like Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains Back     alignment and domain information
>COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG2007 consensus Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12451 arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete Back     alignment and domain information
>PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PF06827 zf-FPG_IleRS: Zinc finger found in FPG and IleRS; InterPro: IPR010663 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule Back     alignment and domain information
>PF00750 tRNA-synt_1d: tRNA synthetases class I (R); InterPro: IPR015945 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PLN02286 arginine-tRNA ligase Back     alignment and domain information
>cd09287 GluRS_non_core catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>TIGR00463 gltX_arch glutamyl-tRNA synthetase, archaeal and eukaryotic family Back     alignment and domain information
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN03233 putative glutamate-tRNA ligase; Provisional Back     alignment and domain information
>TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase Back     alignment and domain information
>PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PLN02907 glutamate-tRNA ligase Back     alignment and domain information
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>PTZ00402 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00807 GlnRS_core catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>PTZ00437 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00440 glnS glutaminyl-tRNA synthetase Back     alignment and domain information
>PLN02859 glutamine-tRNA ligase Back     alignment and domain information
>TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family Back     alignment and domain information
>PRK14895 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK05347 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PRK12410 glutamylglutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK05710 glutamyl-Q tRNA(Asp) synthetase; Reviewed Back     alignment and domain information
>PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>PRK12558 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>PLN02627 glutamyl-tRNA synthetase Back     alignment and domain information
>PRK01406 gltX glutamyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF01921 tRNA-synt_1f: tRNA synthetases class I (K); InterPro: IPR002904 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG1384 LysS Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd07956 Anticodon_Ia_Arg Anticodon-binding domain of arginyl tRNA synthetases Back     alignment and domain information
>KOG1195 consensus Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12285 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query881
1qu2_A 917 Insights Into Editing From An Ile-Trna Synthetase S 2e-75
1qu2_A917 Insights Into Editing From An Ile-Trna Synthetase S 6e-53
1jzq_A821 Isoleucyl-Trna Synthetase Complexed With Isoleucyl- 7e-39
1jzq_A821 Isoleucyl-Trna Synthetase Complexed With Isoleucyl- 4e-09
1wk8_A194 Isoleucyl-Trna Synthetase Editing Domain Complexed 7e-14
1wny_A186 Isoleucyl-Trna Synthetase Editing Domain Length = 1 3e-12
1ue0_A182 Isoleucyl-Trna Synthetase Editing Domain Complexed 6e-11
1udz_A182 Isoleucyl-Trna Synthetase Editing Domain Length = 1 6e-11
1gax_A862 Crystal Structure Of Thermus Thermophilus Valyl-Trn 7e-09
1obh_A 878 Leucyl-Trna Synthetase From Thermus Thermophilus Co 5e-08
2v0c_A 878 Leucyl-Trna Synthetase From Thermus Thermophilus Co 5e-08
1f4l_A551 Crystal Structure Of The E.Coli Methionyl-Trna Synt 5e-07
3h97_A560 Structure Of A Mutant Methionyl-trna Synthetase Wit 5e-07
1qqt_A551 Methionyl-Trna Synthetase From Escherichia Coli Len 5e-07
1p7p_A551 Methionyl-trna Synthetase From Escherichia Coli Com 5e-07
3h9c_A547 Structure Of Methionyl-Trna Synthetase: Crystal For 5e-07
4aq7_A880 Ternary Complex Of E. Coli Leucyl-Trna Synthetase, 7e-07
4aq7_A880 Ternary Complex Of E. Coli Leucyl-Trna Synthetase, 9e-05
1wz2_A 967 The Crystal Structure Of Leucyl-Trna Synthetase And 3e-06
1wz2_A967 The Crystal Structure Of Leucyl-Trna Synthetase And 3e-05
1wkb_A810 Crystal Structure Of Leucyl-Trna Synthetase From Th 3e-06
2x1l_A524 Crystal Structure Of Mycobacterium Smegmatis Methio 9e-06
2ajg_A196 Crystal Structure Of The Editing Domain Of E. Coli 3e-05
3ziu_A637 Crystal Structure Of Mycoplasma Mobile Leucyl-trna 3e-05
3o0a_A219 Crystal Structure Of The Wild Type Cp1 Hydrolitic D 7e-04
3pz0_A221 The Crystal Structure Of Aaleurs-Cp1 Length = 221 8e-04
3pz5_A201 The Crystal Structure Of Aaleurs-Cp1-D20 Length = 2 9e-04
>pdb|1QU2|A Chain A, Insights Into Editing From An Ile-Trna Synthetase Structure With Trna(Ile) And Mupirocin Length = 917 Back     alignment and structure 
Iteration: 1

 Score =  280 bits (716), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 170/443 (38%), Positives = 233/443 (52%), Gaps = 39/443 (8%)
Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y+ T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YEKTLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62
Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSXX 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ +  
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120
Query: 225 XXXXXXXXXXXXXXQMASFKRYGVWADWNNPYLTLDPEYEAAQ---YPEGHVSRSIYAVF 281
                         Q   F+R GV  D+N+PY+TL PEYEAAQ   + E      IY   
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180
Query: 282 RMVSAPPSTSGLLNEFLPDLGLXXXXXXXXXXXXXXXXXXXXKLQYAVVEIQSLLEGDSA 341
           + V   PS+   L E                            + + V + + +++ D+ 
Sbjct: 181 KPVYWSPSSESSLAE--------------AEIEYHDKRSASIYVAFNVKDDKGVVDADAK 226
Query: 342 A---PANKKSRPGNV--------------LKDQKKVFIIVASDLVPTLEAKWGTKLVIKK 384
                    + P NV              +  +K +     SD V          + ++K
Sbjct: 227 FIIWTTTPWTIPSNVAITVHPELKYGQYNVNGEKYIIAEALSDAVAEALDWDKASIKLEK 286
Query: 385 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPI 444
              G +LE     HP  +R+  +VI GD++TT++GTG VHTAPGHG++DY+   +Y LP+
Sbjct: 287 EYTGKELEWVVAQHPFLDRES-LVINGDHVTTDAGTGCVHTAPGHGEDDYIVGQQYELPV 345
Query: 445 LSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPT 504
           +SP+DD+G FTEE G+F G+      N AV   L E+ +L+  +   H YP+DWRTKKP 
Sbjct: 346 ISPIDDKGVFTEEGGQFEGM-FYDKANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPV 404
Query: 505 IFRATEQWFASVEGFRQAAMDAI 527
           IFRAT QWFAS+   RQ  +DAI
Sbjct: 405 IFRATPQWFASISKVRQDILDAI 427
>pdb|1QU2|A Chain A, Insights Into Editing From An Ile-Trna Synthetase Structure With Trna(Ile) And Mupirocin Length = 917 Back     alignment and structure
>pdb|1JZQ|A Chain A, Isoleucyl-Trna Synthetase Complexed With Isoleucyl- Adenylate Analogue Length = 821 Back     alignment and structure
>pdb|1JZQ|A Chain A, Isoleucyl-Trna Synthetase Complexed With Isoleucyl- Adenylate Analogue Length = 821 Back     alignment and structure
>pdb|1WK8|A Chain A, Isoleucyl-Trna Synthetase Editing Domain Complexed With The Pre-Transfer Editing Substrate Analogue, Val-Ams Length = 194 Back     alignment and structure
>pdb|1WNY|A Chain A, Isoleucyl-Trna Synthetase Editing Domain Length = 186 Back     alignment and structure
>pdb|1UE0|A Chain A, Isoleucyl-Trna Synthetase Editing Domain Complexed With L- Valine Length = 182 Back     alignment and structure
>pdb|1UDZ|A Chain A, Isoleucyl-Trna Synthetase Editing Domain Length = 182 Back     alignment and structure
>pdb|1GAX|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna Synthetase Complexed With Trna(Val) And Valyl-Adenylate Analogue Length = 862 Back     alignment and structure
>pdb|1OBH|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed With A Pre-Transfer Editing Substrate Analogue In Both Synthetic Active Site And Editing Site Length = 878 Back     alignment and structure
>pdb|2V0C|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed With A Sulphamoyl Analogue Of Leucyl-Adenylate In The Synthetic Site And An Adduct Of Amp With 5-Fluoro-1,3- Dihydro-1-Hydroxy-2,1-Benzoxaborole (An2690) In The Editing Site Length = 878 Back     alignment and structure
>pdb|1F4L|A Chain A, Crystal Structure Of The E.Coli Methionyl-Trna Synthetase Complexed With Methionine Length = 551 Back     alignment and structure
>pdb|3H97|A Chain A, Structure Of A Mutant Methionyl-trna Synthetase With Modified Specificity Length = 560 Back     alignment and structure
>pdb|1QQT|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Length = 551 Back     alignment and structure
>pdb|1P7P|A Chain A, Methionyl-trna Synthetase From Escherichia Coli Complexed With Methionine Phosphonate Length = 551 Back     alignment and structure
>pdb|3H9C|A Chain A, Structure Of Methionyl-Trna Synthetase: Crystal Form 2 Length = 547 Back     alignment and structure
>pdb|4AQ7|A Chain A, Ternary Complex Of E. Coli Leucyl-Trna Synthetase, Trna(Leu) And Leucyl-Adenylate Analogue In The Aminoacylation Conformation Length = 880 Back     alignment and structure
>pdb|4AQ7|A Chain A, Ternary Complex Of E. Coli Leucyl-Trna Synthetase, Trna(Leu) And Leucyl-Adenylate Analogue In The Aminoacylation Conformation Length = 880 Back     alignment and structure
>pdb|1WZ2|A Chain A, The Crystal Structure Of Leucyl-Trna Synthetase And Trna(Leucine) Complex Length = 967 Back     alignment and structure
>pdb|1WZ2|A Chain A, The Crystal Structure Of Leucyl-Trna Synthetase And Trna(Leucine) Complex Length = 967 Back     alignment and structure
>pdb|1WKB|A Chain A, Crystal Structure Of Leucyl-Trna Synthetase From The Archaeon Pyrococcus Horikoshii Reveals A Novel Editing Domain Orientation Length = 810 Back     alignment and structure
>pdb|2X1L|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Methionyl-Trna Synthetase In Complex With Methionine And Adenosine Length = 524 Back     alignment and structure
>pdb|2AJG|A Chain A, Crystal Structure Of The Editing Domain Of E. Coli Leucyl- Trna Synthetase Length = 196 Back     alignment and structure
>pdb|3ZIU|A Chain A, Crystal Structure Of Mycoplasma Mobile Leucyl-trna Synthetase With Leu-ams In The Active Site Length = 637 Back     alignment and structure
>pdb|3O0A|A Chain A, Crystal Structure Of The Wild Type Cp1 Hydrolitic Domain From Aquifex Aeolicus Leucyl-Trna Length = 219 Back     alignment and structure
>pdb|3PZ0|A Chain A, The Crystal Structure Of Aaleurs-Cp1 Length = 221 Back     alignment and structure
>pdb|3PZ5|A Chain A, The Crystal Structure Of Aaleurs-Cp1-D20 Length = 201 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query881
1ffy_A 917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 0.0
1ffy_A917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 1e-128
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 1e-136
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 7e-42
1wz2_A 967 Leucyl-tRNA synthetase; ligase, riken structural g 3e-71
1wz2_A967 Leucyl-tRNA synthetase; ligase, riken structural g 1e-23
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 2e-63
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 3e-17
1wny_A186 Isoleucyl-tRNA synthetase; ligase, structural geno 2e-58
2wfd_A252 Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRN 7e-38
2wfg_A261 Cytosolic leucyl-tRNA synthetase; ligase, editing 4e-29
3pz6_A311 Leurs, leucyl-tRNA synthetase; editing domain, gll 7e-26
1gax_A 862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 1e-18
1gax_A862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 4e-13
1gax_A862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 1e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
2v0c_A 878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 9e-11
2v0c_A878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 3e-06
2v0c_A878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 2e-04
4arc_A880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 2e-10
4arc_A880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 1e-06
4arc_A880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 1e-04
1wka_A147 Valyl-tRNA synthetase; editing, CP1, fidelity, the 6e-10
1rqg_A722 Methionyl-tRNA synthetase; translation, dimerizati 4e-09
1rqg_A722 Methionyl-tRNA synthetase; translation, dimerizati 6e-04
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 6e-09
3h99_A560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 9e-09
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 1e-08
2x1l_A524 Methionyl-tRNA synthetase; nucleotide-binding, pro 1e-08
4dlp_A536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 1e-08
3tun_A542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 2e-08
3kfl_A564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 4e-08
2ajg_A196 Leucyl-tRNA synthetase; editing domain, ligase; 2. 2e-07
3o0a_A219 Leucyl-tRNA synthetase subunit alpha; CP1 hydrolyt 5e-07
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Length = 917 Back     alignment and structure
 Score =  595 bits (1536), Expect = 0.0
 Identities = 178/471 (37%), Positives = 246/471 (52%), Gaps = 77/471 (16%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y+ T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YEKTLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE  + +   +  +K ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVD--RKKMSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQ----------------- 267
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQ                 
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 268 -------------------YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 308
                              Y +   S SIY  F +                D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHD-KRSASIYVAFNVKDDK-------GVVDADAKFIIWTT 232

Query: 309 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 368
           TPWT+P+N A+ V+ +L+Y    +     G+                       I+A  L
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNV----NGE---------------------KYIIAEAL 267

Query: 369 VPTLEAKWG---TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 425
              +          + ++K   G +LE     HP  +R+  V I GD++TT++GTG VHT
Sbjct: 268 SDAVAEALDWDKASIKLEKEYTGKELEWVVAQHPFLDRESLV-INGDHVTTDAGTGCVHT 326

Query: 426 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 485
           APGHG++DY+   +Y LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+
Sbjct: 327 APGHGEDDYIVGQQYELPVISPIDDKGVFTEEGGQFEGMFYD-KANKAVTDLLTEKGALL 385

Query: 486 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 536
             +   H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI    +    
Sbjct: 386 KLDFITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAIENTNFKVNW 436
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Length = 917 Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Length = 821 Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Length = 821 Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Length = 967 Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Length = 967 Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Length = 810 Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Length = 810 Back     alignment and structure
>1wny_A Isoleucyl-tRNA synthetase; ligase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.60A {Thermus thermophilus} PDB: 1wnz_A* 1wk8_A* 1udz_A 1ue0_A Length = 186 Back     alignment and structure
>2wfd_A Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRNA synthetase, phosphoprotein, editing domain, nucleotide-binding, hydrolysis of MIS-charged trnas; 3.25A {Homo sapiens} Length = 252 Back     alignment and structure
>2wfg_A Cytosolic leucyl-tRNA synthetase; ligase, editing domain, hydrolysis of MIS-charged trnas, benzoxaborole, anti-fungal; HET: ZZB; 2.20A {Candida albicans} PDB: 2wfe_A* Length = 261 Back     alignment and structure
>3pz6_A Leurs, leucyl-tRNA synthetase; editing domain, glleurs_CP1, ligase; 2.60A {Giardia intestinalis} Length = 311 Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Length = 862 Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Length = 862 Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Length = 862 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Length = 878 Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Length = 878 Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Length = 878 Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Length = 880 Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Length = 880 Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Length = 880 Back     alignment and structure
>1wka_A Valyl-tRNA synthetase; editing, CP1, fidelity, thermus thrmophilus, translation, amino acid, structural genomics; 1.70A {Thermus thermophilus} SCOP: b.51.1.1 PDB: 1wk9_A* Length = 147 Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Length = 722 Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Length = 722 Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Length = 497 Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Length = 560 Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Length = 500 Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Length = 524 Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Length = 536 Back     alignment and structure
>3tun_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, translation, nucleotide binding; HET: C13; 2.55A {Trypanosoma brucei} Length = 542 Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Length = 564 Back     alignment and structure
>2ajg_A Leucyl-tRNA synthetase; editing domain, ligase; 2.00A {Escherichia coli} PDB: 2ajh_A 2aji_A Length = 196 Back     alignment and structure
>3o0a_A Leucyl-tRNA synthetase subunit alpha; CP1 hydrolytic DOM ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide- protein biosynthesis; 1.77A {Aquifex aeolicus} PDB: 3pz0_A 3pz5_A Length = 219 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 881
d1ffya1273 a.27.1.1 (A:645-917) Isoleucyl-tRNA synthetase (Il 6e-53
d1ffya3450 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthe 2e-42
d1ffya3450 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthe 4e-04
d1ilea3452 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthe 2e-39
d1ilea3452 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthe 7e-04
d1h3na3494 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetas 4e-36
d1ivsa4425 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase 6e-35
d1ffya2194 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (Il 9e-29
d1pfva2350 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthe 1e-21
d1udza_179 b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {T 4e-20
d1rqga2361 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthe 2e-19
d2d5ba2348 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetR 7e-19
d1h3na2192 b.51.1.1 (A:226-417) Leucyl-tRNA synthetase (LeuRS 6e-12
d1irxa2317 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase { 7e-08
d1wkaa1143 b.51.1.1 (A:195-337) Valyl-tRNA synthetase (ValRS) 4e-07
d1ivsa2218 a.27.1.1 (A:579-796) Valyl-tRNA synthetase (ValRS) 5e-07
d1h3na1128 a.27.1.1 (A:687-814) Leucyl-tRNA synthetase (LeuRS 2e-05
d1li5a2315 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysR 3e-04
>d1ffya1 a.27.1.1 (A:645-917) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 273 Back     information, alignment and structure

class: All alpha proteins
fold: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
superfamily: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
family: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
domain: Isoleucyl-tRNA synthetase (IleRS)
species: Staphylococcus aureus [TaxId: 1280]

 Score =  183 bits (465), Expect = 6e-53
 Identities = 101/299 (33%), Positives = 151/299 (50%), Gaps = 30/299 (10%)

Query: 573 YRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKI 631
           YRK+R TLR++LGN++D+    +SI   +L  +D+Y L +L     +   +YE++ +  I
Sbjct: 1   YRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNRLREFTASTINNYENFDYLNI 60

Query: 632 FQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLA 691
           +Q +Q FI V+LSNFY D  KD LY     S  RRS QTVL   L+ + +++APIL H A
Sbjct: 61  YQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTA 120

Query: 692 EDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILELRTEVNKVLE 751
           E+VW + P         A           L +KWR             + LR +VN+ LE
Sbjct: 121 EEVWSHTPHVKEESVHLADMPKVVEVDQALLDKWR-----------TFMNLRDDVNRALE 169

Query: 752 VARTGKLIGSSLEAKVYLFTDDASLASRLREMCTAKHDADTLQRIFIISQVEVLPSTPNG 811
            AR  K+IG SLEAKV + ++D   AS       A H    + ++ ++ +++   +    
Sbjct: 170 TARNEKVIGKSLEAKVTIASNDKFNASEFLTSFDALHQLFIVSQVKVVDKLDDQAT---- 225

Query: 812 LIRNIPYSGEYLVEGKDKVWIGVSRAEGSKCERCWNYSTQVGSFVEHPTLCSRCYEVLA 870
                           +   I +  A+G KCERCWNYS  +G+  E   LC RC +V+ 
Sbjct: 226 --------------AYEHGDIVIEHADGEKCERCWNYSEDLGAVDELTHLCPRCQQVVK 270
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 450 Back     information, alignment and structure
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 450 Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 452 Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 452 Back     information, alignment and structure
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 494 Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 425 Back     information, alignment and structure
>d1ffya2 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 194 Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Length = 350 Back     information, alignment and structure
>d1udza_ b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 179 Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Length = 361 Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Length = 348 Back     information, alignment and structure
>d1h3na2 b.51.1.1 (A:226-417) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 192 Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 317 Back     information, alignment and structure
>d1wkaa1 b.51.1.1 (A:195-337) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 143 Back     information, alignment and structure
>d1ivsa2 a.27.1.1 (A:579-796) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 218 Back     information, alignment and structure
>d1h3na1 a.27.1.1 (A:687-814) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 128 Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Length = 315 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query881
d1ffya3450 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 100.0
d1ffya1273 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 100.0
d1h3na3494 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 100.0
d1ilea3452 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 100.0
d1ivsa4425 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 100.0
d1udza_179 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 100.0
d1ffya2194 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 100.0
d1wkaa1143 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 100.0
d1ilea1180 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 100.0
d1h3na2192 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 100.0
d1ivsa2218 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 100.0
d1rqga2361 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 99.96
d1pfva2350 Methionyl-tRNA synthetase (MetRS) {Escherichia col 99.95
d2d5ba2348 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 99.91
d1li5a2315 Cysteinyl-tRNA synthetase (CysRS) {Escherichia col 99.8
d1h3na1128 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 99.8
d1rqga1210 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 99.58
d1irxa2317 Class I lysyl-tRNA synthetase {Archaeon Pyrococcus 99.22
d1pfva1162 Methionyl-tRNA synthetase (MetRS) {Escherichia col 99.15
d2d5ba1152 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 99.14
d1f7ua2348 Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa 98.61
d1iq0a2370 Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi 98.35
d1j09a2305 Glutamyl-tRNA synthetase (GluRS) {Thermus thermoph 97.19
d1nzja_286 Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia c 96.53
d1gtra2331 Glutaminyl-tRNA synthetase (GlnRS) {Escherichia co 96.37
d1j1ua_306 Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanoc 82.99
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Isoleucyl-tRNA synthetase (IleRS)
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=0  Score=450.39  Aligned_cols=185  Identities=46%  Similarity=0.820  Sum_probs=166.5

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC-CCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             5854354487778899889122236999998858974002237-999956972599998996611298777899999999
Q 002784          104 GRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADK-NDGENFVLHDGPPYANGNLHMGHALNKILKDIINRY  182 (881)
Q Consensus       104 ~~~~~tl~lp~t~f~~r~n~~~~E~~~~~~W~~~~~y~~~~~~-~~~~~f~l~dgPPyaNG~lHiGHaln~il~Dii~R~  182 (881)
                      |+|++||+||||+||||+|++++|++||++|+++++|++..+. .++++|++++|||||||.||||||+|++++||++||
T Consensus         1 ~~~~~tl~lp~t~f~~~~~~~~~E~~~~~~W~~~~~~~~~~~~~~~~~~f~~~~~pPy~nG~lHiGH~~~~~~~Dv~~Ry   80 (450)
T d1ffya3           1 MDYEKTLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRY   80 (450)
T ss_dssp             CCSGGGSCCCCCCCCSSCCHHHHHHHHHHHHHHTTHHHHHHHHTTTSCBCCEECCCCBSSSCCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             98410217878999777886788999999998779811421025899838996389898885236688999999999999


Q ss_pred             HHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf             98489904431675889937999999753521005799479899999999999999999999815533569986689500
Q 002784          183 KLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPE  262 (881)
Q Consensus       183 ~~l~G~~V~~~~GwD~hGlpie~~a~k~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~f~~lGi~~DW~~~y~T~dp~  262 (881)
                      +||+||+|+|++||||||+|||.++.+...  ...+++..++++.|++++.++++.++.+|++||+++||+++|+|++|+
T Consensus        81 ~rm~G~~V~~~~G~D~~G~pie~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~D~~~~~~T~~~~  158 (450)
T d1ffya3          81 KTMQGFYAPYVPGWDTHGLPIEQALTKKGV--DRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPE  158 (450)
T ss_dssp             HHTTTCBCCCCCEEBCCSHHHHHHHHHHTC--CSTTTCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSCTTSCEETTSHH
T ss_pred             HHHCCCCCCCCCCCCCCCCHHHHHHHHHCC--CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
T ss_conf             994699131024302477299998875088--611014898854120013332234788998876530132111232089


Q ss_pred             HHHCE-------ECCCCEECEEEEEEEECCCCCCCCCCC
Q ss_conf             11320-------038824013564765237999851000
Q 002784          263 YEAAQ-------YPEGHVSRSIYAVFRMVSAPPSTSGLL  294 (881)
Q Consensus       263 y~~~q-------Y~~g~~s~siyv~f~~~~~~~~~~~~l  294 (881)
                      |++.+       |++|++    |.+...+.||+.+.+.+
T Consensus       159 ~~~~v~~~f~~l~~~G~i----y~~~~~v~~~p~~~~~~  193 (450)
T d1ffya3         159 YEAAQIRIFGEMADKGLI----YKGKKPVYWSPSSESSL  193 (450)
T ss_dssp             HHHHHHHHHHHHHHTTCE----EEEEEEEEEETTTTEEC
T ss_pred             HHHHHHHHHHHHHHCCCE----ECCCCCCCCCCCCCCCC
T ss_conf             999999999999976980----02345453322558642
>d1ffya1 a.27.1.1 (A:645-917) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1udza_ b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ffya2 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1wkaa1 b.51.1.1 (A:195-337) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ilea1 a.27.1.1 (A:642-821) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1h3na2 b.51.1.1 (A:226-417) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ivsa2 a.27.1.1 (A:579-796) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1h3na1 a.27.1.1 (A:687-814) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rqga1 a.27.1.1 (A:397-606) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1pfva1 a.27.1.1 (A:389-550) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2d5ba1 a.27.1.1 (A:349-500) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1j1ua_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure