Citrus Sinensis ID: 003799

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790----
MSFILKSFASNSSVSTPREATIAMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLKFLSFLNVTCYSICSGDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNETEGFSSF
cHHHHHHHHccccccccHHHHHHHHHcccHHHHHHcccccccccccccEEEcccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccccccccccEEEEEccccccccHHHHHHccccccEEEEEEcccccccccccccccccccccccccccEEEEEEcccHHHHHHHHcccEEEEEEEEccccccccccccccccccccEEEccEEEcccccccccccccccHHHHHHHHHcccccccccccccccccccccccccEEccccHHHHHHHHHHcccccccccccccccccccccccEEEEccccccccHHHHHHHHHHHHcccEEEccccccccHHHHHHcccccccccccccccHHHHHHHHHHHHHHcccEEEEcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHcccccccccccccccEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccc
cccHHHHHccccccccHHHHHHHHHHccccHHHcccccHHccccccEEEEEEcccccEEEccHcEEEEEEEcccccccccccccccccHHHHHHHccccccccccHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccEccEEccccEccccccHHHHHHHHHHHHHHHHHHccccEcccccEEEcccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEcccHHHHHHHHHHHHHHHHcccEEEEEEEEEEEccccEEccHHHEEEcccccccEEEEEEEccccccHHHHHHHHcccccEEEEEEcccccccccEEEEEccccEEEEEEEccccccccccccccccccccccccccccEEEEHHHHHHHHHHHHccccEEEEEEccHHHccEEEEcccccccccccccccccccccccccccEccccccHHHHcccccccccccccccccccccccccccccHHHHHHHHccHHHccHHHHccccEEEEEEEEEEcccccEcEEEEEEEEEEcHHHHHHHHHHHHccccEcHHHHHHHccHHHHHHHHHcccccccEEccHHHHHHHHHHHHHHHHHHHHHHHccccccccHcccHHHccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccccccEEEHcccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
msfilksfasnssvstprEATIAMMQSSSYRVLSRRTCSSFRKKASVnlfdsrgssslkFLSFLNVTCysicsgdefcssskrrsrgpvmaAKKAaegekkeegrykhtvdlpkttfgmranalvrepeihklWDDHQVFLRVAdkndgenfvlhdgppyangnlhmGHALNKILKDIINRYKLLQNYkvryvpgwdchglpIELKVLQSLdedakkdltpSKLRAKAAKFAKATVKAQMASFKRYgvwadwnnpyltldpeyeAAQIEVFGQMSLqgyiyrgkkpvhwspssrTALAEAEleypeghvsRSIYAVFRMvsappstsgllneflpdlglavwtttpwtvpanaAVAVNAKLQYAVVEIQSllegdsaapankksrpgnvlkdqKKVFIIVASDlvptleakwgtKLVIKKTlagsdlencryvhpvdnrqcpvviggdyittesgtglvhtapghgqedyvtslkyglpilspvddegkfteeagkfsgldvlgdgNVAVVKYLDEQMSLImeepyehkypydwrtkkptiFRATEQWFASVEGFRQAAMDAIgqvkwvppqeapgygadVLRLWVSSVdytgdvmigpqVLRQMSDIYRKLRGTLRYLLGNlhdwrvgnsisyddlpmiDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSnfyfdvakdrlytggttsftRRSCQTVLSAHLLSIVRVIAPilphlaedvwqnlpfaytledgsaaefvfeskwpvldekwrtfpvgeiyfWGKILEVIVVVTYLnetegfssf
msfilksfasnssvstpreATIAMMQSSSYRVLSRRTCSSFRKKAsvnlfdsrgssslKFLSFLNVTCYSICSGDefcssskrrsrgpvmaakkaaegekkeegrykhtvdlpkttfgmRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLlegdsaapankksrpgnvlkdqkkVFIIVASdlvptleakwgtkLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGkfsgldvlgdgNVAVVKYLDEQMSLIMEepyehkypydWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNETEGFSSF
MSFILKSFASNSSVSTPREATIAMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLKFLSFLNVTCYSICSGDEFCSSSKRRSRGPVMaakkaaegekkeegRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSklrakaakfakatvkaQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLavwtttpwtvpanaavavnaKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYqffkifqiiqrfiiVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNETEGFSSF
**********************************************VNLFD****SSLKFLSFLNVTCYSICSGDEFC*******************************VDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSL*****************AKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWS*****ALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLL*******************DQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNE*******
********ASNSSVSTPR*ATIAMMQSSSYRVL***********ASVNLFDSRGSSSLKFLSFLNVTCYSIC*************************************VDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQ*********LTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNETEGFS**
MSFILKSFASNSSVSTPREATIAMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLKFLSFLNVTCYSICSGDEFC**************************RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL*************AQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNETEGFSSF
************SV******************LSRRTCSSFRKKASVNLFDSRGSSSLKFLSFLNVTCYSICS******************************GRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSL**********************KKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNETEGFSSF
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSFILKSFASNSSVSTPREATIAMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLKFLSFLNVTCYSICSGDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQEAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGNSISYDDLPMIDQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNETEGFSSF
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query794 2.2.26 [Sep-21-2011]
B2IZP5 959 Isoleucine--tRNA ligase O yes no 0.570 0.472 0.643 0.0
Q8YXY3 960 Isoleucine--tRNA ligase O yes no 0.573 0.473 0.651 0.0
B7KFT1 959 Isoleucine--tRNA ligase O yes no 0.568 0.470 0.626 1e-177
B7K5H5 959 Isoleucine--tRNA ligase O yes no 0.568 0.470 0.622 1e-175
B0JSP4 952 Isoleucine--tRNA ligase O yes no 0.551 0.460 0.621 1e-173
B1WVA3 959 Isoleucine--tRNA ligase O yes no 0.562 0.466 0.623 1e-171
P73505 988 Isoleucine--tRNA ligase O N/A no 0.568 0.456 0.617 1e-170
B8HMX3 955 Isoleucine--tRNA ligase O yes no 0.560 0.465 0.609 1e-169
B0C872 971 Isoleucine--tRNA ligase O yes no 0.560 0.458 0.598 1e-166
Q8DGI7 953 Isoleucine--tRNA ligase O yes no 0.561 0.467 0.601 1e-165
>sp|B2IZP5|SYI_NOSP7 Isoleucine--tRNA ligase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=ileS PE=3 SV=1 Back     alignment and function desciption
 Score =  641 bits (1653), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 303/471 (64%), Positives = 366/471 (77%), Gaps = 18/471 (3%)

Query: 102 EEGRYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYA 161
           E G YK TV+LPKT+F MRANA+ REPEI K W++++++ R+ + N GE F+LHDGPPYA
Sbjct: 3   ESGSYKDTVNLPKTSFDMRANAIKREPEIQKFWEENKIYDRLFENNPGELFILHDGPPYA 62

Query: 162 NGNLHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTP 221
           NG+LH+GHALNKILKDIINRY++L+  KVRYVPGWDCHGLPIELKVLQ++    +++LTP
Sbjct: 63  NGSLHIGHALNKILKDIINRYQMLRGRKVRYVPGWDCHGLPIELKVLQNMKSAERQNLTP 122

Query: 222 SKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIY 281
            +LR KA +F  ATV  Q  +FKRYG+W DW+NPYLTL PEYEAAQI VFGQM L+GYIY
Sbjct: 123 LQLRQKAKEFGLATVDNQRQNFKRYGIWGDWDNPYLTLKPEYEAAQIGVFGQMFLKGYIY 182

Query: 282 RGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAV 341
           RG KPVHWSPSS+TALAEAELEYPEGHVSRSIYA F + S   +   LL E+  DLG+A+
Sbjct: 183 RGLKPVHWSPSSKTALAEAELEYPEGHVSRSIYAAFPVTSLAEAVKPLLAEYQSDLGVAI 242

Query: 342 WTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVA 401
           WTTTPWT+P N AVAVNA L YAVVE+       S + A  K +           ++IVA
Sbjct: 243 WTTTPWTIPGNLAVAVNADLNYAVVEV-------SQSEAQSKFK-----------YLIVA 284

Query: 402 SDLVPTLEAKWGTKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
           +DLV  L +  G +L +K T  G+DLE+  Y HP+ +R+ P+V+GGDYITTESGTGLVHT
Sbjct: 285 ADLVERLSSTLGLELTLKATFKGNDLEHTTYRHPLFDRESPIVVGGDYITTESGTGLVHT 344

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHGQEDY+   +YGLPIL+PVDD G FT+EAG+F+GL+VLGDGN AV+  L    SL+
Sbjct: 345 APGHGQEDYIVGQRYGLPILAPVDDNGNFTQEAGEFAGLNVLGDGNQAVIDALAAAGSLL 404

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
            EEPY HKYPYDWRTKKPTIFRATEQWFASVEGFR+ A+ AI  VKW+P Q
Sbjct: 405 KEEPYPHKYPYDWRTKKPTIFRATEQWFASVEGFREEALKAIATVKWIPAQ 455
Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile).
Nostoc punctiforme (strain ATCC 29133 / PCC 73102) (taxid: 63737)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 5
>sp|Q8YXY3|SYI_NOSS1 Isoleucine--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=ileS PE=3 SV=1 Back     alignment and function description
>sp|B7KFT1|SYI_CYAP7 Isoleucine--tRNA ligase OS=Cyanothece sp. (strain PCC 7424) GN=ileS PE=3 SV=1 Back     alignment and function description
>sp|B7K5H5|SYI_CYAP8 Isoleucine--tRNA ligase OS=Cyanothece sp. (strain PCC 8801) GN=ileS PE=3 SV=1 Back     alignment and function description
>sp|B0JSP4|SYI_MICAN Isoleucine--tRNA ligase OS=Microcystis aeruginosa (strain NIES-843) GN=ileS PE=3 SV=1 Back     alignment and function description
>sp|B1WVA3|SYI_CYAA5 Isoleucine--tRNA ligase OS=Cyanothece sp. (strain ATCC 51142) GN=ileS PE=3 SV=1 Back     alignment and function description
>sp|P73505|SYI_SYNY3 Isoleucine--tRNA ligase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ileS PE=3 SV=1 Back     alignment and function description
>sp|B8HMX3|SYI_CYAP4 Isoleucine--tRNA ligase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ileS PE=3 SV=1 Back     alignment and function description
>sp|B0C872|SYI_ACAM1 Isoleucine--tRNA ligase OS=Acaryochloris marina (strain MBIC 11017) GN=ileS PE=3 SV=1 Back     alignment and function description
>sp|Q8DGI7|SYI_THEEB Isoleucine--tRNA ligase OS=Thermosynechococcus elongatus (strain BP-1) GN=ileS PE=3 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query794
255551751 1102 isoleucyl tRNA synthetase, putative [Ric 0.698 0.503 0.792 0.0
356564073 1093 PREDICTED: isoleucyl-tRNA synthetase-lik 0.716 0.520 0.749 0.0
222422851 955 AT5G49030 [Arabidopsis thaliana] 0.711 0.591 0.748 0.0
449433407 1093 PREDICTED: isoleucine--tRNA ligase-like 0.711 0.516 0.765 0.0
449513369 1093 PREDICTED: isoleucine--tRNA ligase-like 0.711 0.516 0.763 0.0
297795625 1095 hypothetical protein ARALYDRAFT_494966 [ 0.711 0.515 0.757 0.0
334188274 1279 isoleucyl-tRNA synthetase [Arabidopsis t 0.711 0.441 0.752 0.0
225432320 1105 PREDICTED: isoleucyl-tRNA synthetase-lik 0.711 0.511 0.768 0.0
22327660 1093 isoleucyl-tRNA synthetase [Arabidopsis t 0.711 0.516 0.752 0.0
79330394 955 isoleucyl-tRNA synthetase [Arabidopsis t 0.711 0.591 0.752 0.0
>gi|255551751|ref|XP_002516921.1| isoleucyl tRNA synthetase, putative [Ricinus communis] gi|223544009|gb|EEF45535.1| isoleucyl tRNA synthetase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  915 bits (2366), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 451/569 (79%), Positives = 503/569 (88%), Gaps = 14/569 (2%)

Query: 17  PREAT--IAMMQSSSYRVLSRRTCS-SFRKKASVNLFDSRGSSSLKFLSFLNVTCYSICS 73
           P EAT  IAM  SSS R L+RR+CS S R   +V++F  RGSSS K LSFLN   Y   S
Sbjct: 11  PGEATTAIAMFHSSSSRALTRRSCSPSLRNVTAVDVFYYRGSSSTKVLSFLNTNRYCTYS 70

Query: 74  GDEFCSSSKRRSRGPVMAAKKAAEGEKKEEGRYKHTVDLPKTTFGMRANALVREPEIHKL 133
            DEF +SSKRRSRGPVMAAKK+++GEK+EEG+YKHTVDLPKTTF MRANAL REPE+ KL
Sbjct: 71  SDEFGTSSKRRSRGPVMAAKKSSDGEKQEEGKYKHTVDLPKTTFSMRANALTREPELQKL 130

Query: 134 WDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYKLLQNYKVRYV 193
           WDD+QVF RV DKNDG NF+LHDGPPYANG+LH+GHA+NKILKD+INRYK+LQNYKV +V
Sbjct: 131 WDDNQVFKRVVDKNDGGNFILHDGPPYANGDLHIGHAMNKILKDVINRYKILQNYKVHFV 190

Query: 194 PGWDCHGLPIELK----------VLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASF 243
           PGWDCHGLPIELK           LQSLD+ A++DLTPSKLRAKAAKFAKATVK QMASF
Sbjct: 191 PGWDCHGLPIELKGKYKVLFWLRFLQSLDQGAREDLTPSKLRAKAAKFAKATVKTQMASF 250

Query: 244 KRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELE 303
           KRYGVWADW+NPYLTLDP+YEAAQIEVFGQM+LQGYIYRG+KPVHWSPSS TALAEAELE
Sbjct: 251 KRYGVWADWDNPYLTLDPDYEAAQIEVFGQMALQGYIYRGRKPVHWSPSSHTALAEAELE 310

Query: 304 YPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVNAKLQY 363
           YPEGHVS+SIYA+FR+ SAPP++  LL EF PDL LA+WTTTPWTVPANAAVAVN+KLQY
Sbjct: 311 YPEGHVSKSIYAIFRVASAPPTSRLLLEEFFPDLFLAIWTTTPWTVPANAAVAVNSKLQY 370

Query: 364 AVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIKKTLA 423
           AVVE+QSL E  S +P NKK R GNVL++QKK+F+IVASDL+PTLEAKW  KLVIKKTL+
Sbjct: 371 AVVEVQSL-EDASTSPGNKKRRFGNVLREQKKLFLIVASDLMPTLEAKWSVKLVIKKTLS 429

Query: 424 GSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSP 483
           GSDLENCRY+HP+DNR+CPVVIGGDYITTESGTGLVHTAPGHGQEDY+T +KYGLP+LSP
Sbjct: 430 GSDLENCRYIHPIDNRECPVVIGGDYITTESGTGLVHTAPGHGQEDYITGMKYGLPVLSP 489

Query: 484 VDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFR 543
           VDD GKFTEEA  FSGLDVLG+GNVAVVKYLDEQMS++MEE YEHKYPYDWRTKKPTIFR
Sbjct: 490 VDDGGKFTEEAAPFSGLDVLGEGNVAVVKYLDEQMSIVMEESYEHKYPYDWRTKKPTIFR 549

Query: 544 ATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           ATEQWFASVEGFRQAAMDAIG VKW+PPQ
Sbjct: 550 ATEQWFASVEGFRQAAMDAIGHVKWIPPQ 578

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356564073|ref|XP_003550281.1| PREDICTED: isoleucyl-tRNA synthetase-like [Glycine max] Back     alignment and taxonomy information
>gi|222422851|dbj|BAH19412.1| AT5G49030 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449433407|ref|XP_004134489.1| PREDICTED: isoleucine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449513369|ref|XP_004164308.1| PREDICTED: isoleucine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|297795625|ref|XP_002865697.1| hypothetical protein ARALYDRAFT_494966 [Arabidopsis lyrata subsp. lyrata] gi|297311532|gb|EFH41956.1| hypothetical protein ARALYDRAFT_494966 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|334188274|ref|NP_001190497.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana] gi|332008381|gb|AED95764.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|225432320|ref|XP_002276207.1| PREDICTED: isoleucyl-tRNA synthetase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|22327660|ref|NP_199714.2| isoleucyl-tRNA synthetase [Arabidopsis thaliana] gi|19424030|gb|AAL87306.1| putative isoleucyl-tRNA synthetase [Arabidopsis thaliana] gi|23296804|gb|AAN13174.1| putative isoleucyl-tRNA synthetase [Arabidopsis thaliana] gi|332008379|gb|AED95762.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|79330394|ref|NP_001032042.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana] gi|332008380|gb|AED95763.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query794
TAIR|locus:2154349 1093 OVA2 "ovule abortion 2" [Arabi 0.711 0.516 0.677 6.4e-298
TIGR_CMR|BA_4034 921 BA_4034 "isoleucyl-tRNA synthe 0.260 0.224 0.502 3.8e-130
TIGR_CMR|CHY_0534 925 CHY_0534 "isoleucyl-tRNA synth 0.268 0.230 0.5 3.2e-125
DICTYBASE|DDB_G0293030 1034 mileS "isoleucyl-tRNA syntheta 0.267 0.205 0.532 2.6e-122
ZFIN|ZDB-GENE-030616-608 983 iars2 "isoleucine-tRNA synthet 0.272 0.219 0.5 5.5e-116
UNIPROTKB|F1P399 1000 IARS2 "Isoleucine--tRNA ligase 0.287 0.228 0.451 6.2e-114
UNIPROTKB|F1P2C8 1011 IARS2 "Isoleucine--tRNA ligase 0.287 0.225 0.451 6.9e-114
MGI|MGI:1919586 1012 Iars2 "isoleucine-tRNA synthet 0.289 0.227 0.487 7.1e-114
UNIPROTKB|Q5ZKA2 1000 IARS2 "Isoleucine--tRNA ligase 0.287 0.228 0.451 7.8e-114
UNIPROTKB|Q9NSE4 1012 IARS2 "Isoleucine--tRNA ligase 0.289 0.227 0.461 8.6e-114
TAIR|locus:2154349 OVA2 "ovule abortion 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2042 (723.9 bits), Expect = 6.4e-298, Sum P(2) = 6.4e-298
 Identities = 388/573 (67%), Positives = 446/573 (77%)

Query:     1 MSFILKSFASNSSVSTPREAT-IAMMQSSSYRVLSRRTCSSFRKKASVNLFDSRGSSSLK 59
             MS   KSFA N     PREA  +AM+QSSSYRVLS ++CS+ R+   ++ F ++G SS+K
Sbjct:     1 MSSFFKSFAGN-----PREAAAMAMVQSSSYRVLSGKSCSNLRRNTPLDSFLAKGRSSVK 55

Query:    60 FLSFLNVTCYSICSGDEFCSSSKRRSRGPVMXXXXXXXXXXXXXXRYKHTVDLPKTTFGM 119
               SFL V+ +S    +EF  SSKRRSRGPVM              +YK TVDLPKT FGM
Sbjct:    56 AFSFLYVSRFSTEPNNEFGHSSKRRSRGPVMAAKKASEGEKQEDGKYKQTVDLPKTGFGM 115

Query:   120 RANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDII 179
             RAN+L REPE+ KLW+++QVF RV+D N+G +F+LHDGPPYANG+LHMGHALNKILKDII
Sbjct:   116 RANSLTREPELQKLWEENQVFKRVSDNNNGGSFILHDGPPYANGDLHMGHALNKILKDII 175

Query:   180 NRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSXXXXXXXXXXXXXXXXQ 239
             NRYKLLQNYKV+YVPGWDCHGLPIELKVLQSLD++ +K+LTP                 Q
Sbjct:   176 NRYKLLQNYKVQYVPGWDCHGLPIELKVLQSLDQEVRKELTPLKLRAKAAKFAKATVKTQ 235

Query:   240 MASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAE 299
             M SFKR+GVWADWNNPYLTLDPEYEAAQIEVFGQM+L+GYIYRG+KPVHWSPSSRTALAE
Sbjct:   236 MESFKRFGVWADWNNPYLTLDPEYEAAQIEVFGQMALKGYIYRGRKPVHWSPSSRTALAE 295

Query:   300 AELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLXXXXXXXXXXXXXXXXXXXX 359
             AELEYPEGH+S+SIYA+F++V     TS LL+EF+P++ L                    
Sbjct:   296 AELEYPEGHISKSIYAIFKLVGGA-KTS-LLDEFIPNIYLAVWTTTPWTMPANAAVAVNA 353

Query:   360 KLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVIK 419
             KLQY+VVE+QS  E +S   +NKK  PG VLK+Q+K+F+IVA+DLVP LEAKWG KL I 
Sbjct:   354 KLQYSVVEVQSFSEDESTVTSNKKKIPGKVLKNQQKLFVIVATDLVPALEAKWGVKLSIS 413

Query:   420 KTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLP 479
             KT  GSDLENCRY HP+DNR CPVVIGGDYITTESGTGLVHTAPGHGQEDY T LKYGLP
Sbjct:   414 KTFLGSDLENCRYTHPIDNRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGLKYGLP 473

Query:   480 ILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKP 539
             ++SPVDDEGKFTEEAG+F GL VLG+GN AVV YLDE MSL+MEE Y HKYPYDWRTKKP
Sbjct:   474 LVSPVDDEGKFTEEAGQFRGLSVLGEGNTAVVSYLDENMSLVMEESYAHKYPYDWRTKKP 533

Query:   540 TIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
             TIFRATEQWFASVEGFR A MDAI  VKWVP Q
Sbjct:   534 TIFRATEQWFASVEGFRTATMDAINNVKWVPHQ 566
GO:0000166 "nucleotide binding" evidence=IEA
GO:0003824 "catalytic activity" evidence=IEA
GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA;ISS
GO:0004822 "isoleucine-tRNA ligase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM;IEA
GO:0006418 "tRNA aminoacylation for protein translation" evidence=IEA;ISS
GO:0006428 "isoleucyl-tRNA aminoacylation" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
GO:0048481 "ovule development" evidence=RCA;IMP
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0009793 "embryo development ending in seed dormancy" evidence=RCA
GO:0010027 "thylakoid membrane organization" evidence=RCA
GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA
GO:0016117 "carotenoid biosynthetic process" evidence=RCA
GO:0016226 "iron-sulfur cluster assembly" evidence=RCA
TIGR_CMR|BA_4034 BA_4034 "isoleucyl-tRNA synthetase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_0534 CHY_0534 "isoleucyl-tRNA synthetase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0293030 mileS "isoleucyl-tRNA synthetase, mitochondrial" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030616-608 iars2 "isoleucine-tRNA synthetase 2, mitochondrial" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1P399 IARS2 "Isoleucine--tRNA ligase, mitochondrial" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|F1P2C8 IARS2 "Isoleucine--tRNA ligase, mitochondrial" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:1919586 Iars2 "isoleucine-tRNA synthetase 2, mitochondrial" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|Q5ZKA2 IARS2 "Isoleucine--tRNA ligase, mitochondrial" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q9NSE4 IARS2 "Isoleucine--tRNA ligase, mitochondrial" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer6.1.1.50.824
3rd Layer6.1.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh2_kg.8__782__AT5G49030.1
annotation not avaliable (1095 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
fgenesh2_kg.8__2416__AT5G64050.1
annotation not avaliable (570 aa)
• ••  • 0.883
fgenesh2_kg.3__208__AT3G02660.1
annotation not avaliable (511 aa)
•  •  • 0.868
fgenesh2_kg.7__736__AT4G33760.1
annotation not avaliable (664 aa)
•  •  • 0.856
Al_scaffold_0004_707
annotation not avaliable (411 aa)
   •  • 0.849
fgenesh2_kg.2__207__AT1G62750.1
annotation not avaliable (782 aa)
•  •  • 0.839
fgenesh2_kg.4__2694__AT2G45030.1
annotation not avaliable (754 aa)
•  •  • 0.806
scaffold_201045.1
annotation not avaliable (1763 aa)
•     • 0.784
scaffold_602336.1
annotation not avaliable (978 aa)
•     • 0.772
fgenesh2_kg.6__249__AT3G46100.1
annotation not avaliable (486 aa)
•  •  • 0.771
fgenesh1_pm.C_scaffold_3002302
annotation not avaliable (650 aa)
      • 0.768

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query794
PLN02843 974 PLN02843, PLN02843, isoleucyl-tRNA synthetase 0.0
PRK05743 912 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewe 0.0
COG0060 933 COG0060, IleS, Isoleucyl-tRNA synthetase [Translat 0.0
TIGR00392 861 TIGR00392, ileS, isoleucyl-tRNA synthetase 1e-177
PRK13804 961 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisi 1e-162
pfam00133606 pfam00133, tRNA-synt_1, tRNA synthetases class I ( 1e-137
PLN02843 974 PLN02843, PLN02843, isoleucyl-tRNA synthetase 1e-125
PRK06039 975 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewe 1e-120
PRK05743912 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewe 4e-77
cd00818338 cd00818, IleRS_core, catalytic core domain of isol 3e-71
cd07960180 cd07960, Anticodon_Ia_Ile_BEm, Anticodon-binding d 8e-71
COG0060 933 COG0060, IleS, Isoleucyl-tRNA synthetase [Translat 1e-58
PLN02882 1159 PLN02882, PLN02882, aminoacyl-tRNA ligase 5e-57
PRK13804961 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisi 1e-53
TIGR00392861 TIGR00392, ileS, isoleucyl-tRNA synthetase 9e-45
PTZ00427 1205 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putati 4e-44
cd00668312 cd00668, Ile_Leu_Val_MetRS_core, catalytic core do 2e-41
COG0525 877 COG0525, ValS, Valyl-tRNA synthetase [Translation, 6e-39
TIGR00422 861 TIGR00422, valS, valyl-tRNA synthetase 1e-38
cd00817382 cd00817, ValRS_core, catalytic core domain of valy 2e-33
PRK13208 800 PRK13208, valS, valyl-tRNA synthetase; Reviewed 3e-30
pfam08264148 pfam08264, Anticodon_1, Anticodon-binding domain o 4e-28
PRK05729 874 PRK05729, valS, valyl-tRNA synthetase; Reviewed 2e-23
PRK14900 1052 PRK14900, valS, valyl-tRNA synthetase; Provisional 3e-23
COG0495 814 COG0495, LeuS, Leucyl-tRNA synthetase [Translation 4e-23
PLN02943 958 PLN02943, PLN02943, aminoacyl-tRNA ligase 6e-23
TIGR00422 861 TIGR00422, valS, valyl-tRNA synthetase 5e-22
COG0525 877 COG0525, ValS, Valyl-tRNA synthetase [Translation, 2e-20
PRK05729 874 PRK05729, valS, valyl-tRNA synthetase; Reviewed 5e-19
COG0525 877 COG0525, ValS, Valyl-tRNA synthetase [Translation, 1e-18
cd00812314 cd00812, LeuRS_core, catalytic core domain of leuc 2e-18
PLN02563 963 PLN02563, PLN02563, aminoacyl-tRNA ligase 2e-18
TIGR00396 842 TIGR00396, leuS_bact, leucyl-tRNA synthetase, euba 4e-17
COG0143558 COG0143, MetG, Methionyl-tRNA synthetase [Translat 8e-17
PTZ00419 995 PTZ00419, PTZ00419, valyl-tRNA synthetase-like pro 2e-16
TIGR00422 861 TIGR00422, valS, valyl-tRNA synthetase 3e-16
pfam09334388 pfam09334, tRNA-synt_1g, tRNA synthetases class I 4e-16
PLN02381 1066 PLN02381, PLN02381, valyl-tRNA synthetase 1e-15
TIGR00398530 TIGR00398, metG, methionyl-tRNA synthetase 1e-14
cd00814319 cd00814, MetRS_core, catalytic core domain of meth 1e-14
cd07961183 cd07961, Anticodon_Ia_Ile_ABEc, Anticodon-binding 2e-14
cd07962135 cd07962, Anticodon_Ia_Val, Anticodon-binding domai 2e-14
PRK13208800 PRK13208, valS, valyl-tRNA synthetase; Reviewed 5e-14
PRK05729 874 PRK05729, valS, valyl-tRNA synthetase; Reviewed 5e-14
TIGR00395 938 TIGR00395, leuS_arch, leucyl-tRNA synthetase, arch 5e-14
PRK00390 805 PRK00390, leuS, leucyl-tRNA synthetase; Validated 2e-13
PRK06039 975 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewe 5e-13
PRK11893511 PRK11893, PRK11893, methionyl-tRNA synthetase; Rev 1e-11
PRK12268556 PRK12268, PRK12268, methionyl-tRNA synthetase; Rev 1e-11
PRK14900 1052 PRK14900, valS, valyl-tRNA synthetase; Provisional 1e-10
PTZ00419 995 PTZ00419, PTZ00419, valyl-tRNA synthetase-like pro 1e-10
PRK13208 800 PRK13208, valS, valyl-tRNA synthetase; Reviewed 6e-10
PLN02943 958 PLN02943, PLN02943, aminoacyl-tRNA ligase 2e-09
PTZ00419 995 PTZ00419, PTZ00419, valyl-tRNA synthetase-like pro 3e-09
PRK12267648 PRK12267, PRK12267, methionyl-tRNA synthetase; Rev 4e-09
cd00818338 cd00818, IleRS_core, catalytic core domain of isol 7e-09
pfam13603178 pfam13603, tRNA-synt_1_2, Leucyl-tRNA synthetase, 1e-08
PRK12300 897 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed 1e-08
PRK00133673 PRK00133, metG, methionyl-tRNA synthetase; Reviewe 2e-08
PRK00390 805 PRK00390, leuS, leucyl-tRNA synthetase; Validated 7e-08
PRK12300 897 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed 3e-07
COG0495814 COG0495, LeuS, Leucyl-tRNA synthetase [Translation 8e-07
PLN02943 958 PLN02943, PLN02943, aminoacyl-tRNA ligase 9e-07
cd07375117 cd07375, Anticodon_Ia_like, Anticodon-binding doma 2e-06
cd07957129 cd07957, Anticodon_Ia_Met, Anticodon-binding domai 1e-05
TIGR00395 938 TIGR00395, leuS_arch, leucyl-tRNA synthetase, arch 4e-05
PRK00390805 PRK00390, leuS, leucyl-tRNA synthetase; Validated 5e-05
TIGR00396 842 TIGR00396, leuS_bact, leucyl-tRNA synthetase, euba 8e-05
PLN02224616 PLN02224, PLN02224, methionine-tRNA ligase 3e-04
cd00802143 cd00802, class_I_aaRS_core, catalytic core domain 3e-04
PLN02381 1066 PLN02381, PLN02381, valyl-tRNA synthetase 5e-04
COG0495 814 COG0495, LeuS, Leucyl-tRNA synthetase [Translation 8e-04
PLN02882 1159 PLN02882, PLN02882, aminoacyl-tRNA ligase 0.001
PLN02959 1084 PLN02959, PLN02959, aminoacyl-tRNA ligase 0.001
COG0143558 COG0143, MetG, Methionyl-tRNA synthetase [Translat 0.002
cd07959117 cd07959, Anticodon_Ia_Leu_AEc, Anticodon-binding d 0.002
>gnl|CDD|215452 PLN02843, PLN02843, isoleucyl-tRNA synthetase Back     alignment and domain information 
 Score =  936 bits (2422), Expect = 0.0
 Identities = 351/454 (77%), Positives = 397/454 (87%)

Query: 119 MRANALVREPEIHKLWDDHQVFLRVADKNDGENFVLHDGPPYANGNLHMGHALNKILKDI 178
           MRAN++ REPEI KLW+++QV+ RV+D+N+GE+F LHDGPPYANG+LH+GHALNKILKD 
Sbjct: 1   MRANSVTREPEIQKLWEENQVYKRVSDRNNGESFTLHDGPPYANGDLHIGHALNKILKDF 60

Query: 179 INRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKA 238
           INRY+LLQ  KV YVPGWDCHGLPIELKVLQSLD++A+K+LTP KLRAKAAKFAK TV  
Sbjct: 61  INRYQLLQGKKVHYVPGWDCHGLPIELKVLQSLDQEARKELTPIKLRAKAAKFAKKTVDT 120

Query: 239 QMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALA 298
           Q  SFKRYGVW DW NPYLTLDPEYEAAQIEVFGQM L GYIYRG+KPVHWSPSSRTALA
Sbjct: 121 QRESFKRYGVWGDWENPYLTLDPEYEAAQIEVFGQMFLNGYIYRGRKPVHWSPSSRTALA 180

Query: 299 EAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTTTPWTVPANAAVAVN 358
           EAELEYPEGHVS+SIY  F +VS   ++   L EFLP L LA+WTTTPWT+PANAAVAVN
Sbjct: 181 EAELEYPEGHVSKSIYVAFPVVSPSETSPEELEEFLPGLSLAIWTTTPWTMPANAAVAVN 240

Query: 359 AKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTKLVI 418
            KLQY+VVE+QS  E +S +  NKK RPGNVLK+Q+K+F+IVA+DLVP LEAKWG KLV+
Sbjct: 241 DKLQYSVVEVQSFSEDESTSGGNKKKRPGNVLKEQQKLFLIVATDLVPALEAKWGVKLVV 300

Query: 419 KKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGL 478
            KT  GSDLE CRY+HP+ NR+ PVVIGGDYITTESGTGLVHTAPGHGQEDY+T LKYGL
Sbjct: 301 LKTFPGSDLEGCRYIHPLYNRESPVVIGGDYITTESGTGLVHTAPGHGQEDYITGLKYGL 360

Query: 479 PILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKK 538
           P+LSPVDD GKFTEEAG+FSGL VLG+GN AVV+ LDE  SL+MEE Y HKYPYDWRTKK
Sbjct: 361 PLLSPVDDAGKFTEEAGQFSGLSVLGEGNAAVVEALDEAGSLLMEEAYGHKYPYDWRTKK 420

Query: 539 PTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
           PTIFRATEQWFASVEGFRQAA+DAI +VKW+P Q
Sbjct: 421 PTIFRATEQWFASVEGFRQAALDAIDKVKWIPAQ 454

Length = 974
>gnl|CDD|235588 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|223138 COG0060, IleS, Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|232953 TIGR00392, ileS, isoleucyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|237514 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|215739 pfam00133, tRNA-synt_1, tRNA synthetases class I (I, L, M and V) Back     alignment and domain information
>gnl|CDD|215452 PLN02843, PLN02843, isoleucyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|235681 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|235588 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|173909 cd00818, IleRS_core, catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|153414 cd07960, Anticodon_Ia_Ile_BEm, Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|223138 COG0060, IleS, Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|215477 PLN02882, PLN02882, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|237514 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|232953 TIGR00392, ileS, isoleucyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|173617 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>gnl|CDD|185674 cd00668, Ile_Leu_Val_MetRS_core, catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|223599 COG0525, ValS, Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|232969 TIGR00422, valS, valyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|185677 cd00817, ValRS_core, catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|237306 PRK13208, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|219767 pfam08264, Anticodon_1, Anticodon-binding domain of tRNA Back     alignment and domain information
>gnl|CDD|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237855 PRK14900, valS, valyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|223569 COG0495, LeuS, Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|215509 PLN02943, PLN02943, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|232969 TIGR00422, valS, valyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|223599 COG0525, ValS, Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|223599 COG0525, ValS, Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|173906 cd00812, LeuRS_core, catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|178177 PLN02563, PLN02563, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|232956 TIGR00396, leuS_bact, leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>gnl|CDD|223221 COG0143, MetG, Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|240411 PTZ00419, PTZ00419, valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|232969 TIGR00422, valS, valyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|220185 pfam09334, tRNA-synt_1g, tRNA synthetases class I (M) Back     alignment and domain information
>gnl|CDD|215214 PLN02381, PLN02381, valyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|232957 TIGR00398, metG, methionyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|173907 cd00814, MetRS_core, catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|153415 cd07961, Anticodon_Ia_Ile_ABEc, Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|153416 cd07962, Anticodon_Ia_Val, Anticodon-binding domain of valyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|237306 PRK13208, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|232955 TIGR00395, leuS_arch, leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>gnl|CDD|234743 PRK00390, leuS, leucyl-tRNA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235681 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237012 PRK11893, PRK11893, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237029 PRK12268, PRK12268, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237855 PRK14900, valS, valyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|240411 PTZ00419, PTZ00419, valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|237306 PRK13208, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|215509 PLN02943, PLN02943, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|240411 PTZ00419, PTZ00419, valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|237028 PRK12267, PRK12267, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|173909 cd00818, IleRS_core, catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|222257 pfam13603, tRNA-synt_1_2, Leucyl-tRNA synthetase, Domain 2 Back     alignment and domain information
>gnl|CDD|237049 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|234655 PRK00133, metG, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|234743 PRK00390, leuS, leucyl-tRNA synthetase; Validated Back     alignment and domain information
>gnl|CDD|237049 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|223569 COG0495, LeuS, Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|215509 PLN02943, PLN02943, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|153408 cd07375, Anticodon_Ia_like, Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains Back     alignment and domain information
>gnl|CDD|153411 cd07957, Anticodon_Ia_Met, Anticodon-binding domain of methionyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|232955 TIGR00395, leuS_arch, leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>gnl|CDD|234743 PRK00390, leuS, leucyl-tRNA synthetase; Validated Back     alignment and domain information
>gnl|CDD|232956 TIGR00396, leuS_bact, leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>gnl|CDD|177869 PLN02224, PLN02224, methionine-tRNA ligase Back     alignment and domain information
>gnl|CDD|173901 cd00802, class_I_aaRS_core, catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|215214 PLN02381, PLN02381, valyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|223569 COG0495, LeuS, Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|215477 PLN02882, PLN02882, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|215518 PLN02959, PLN02959, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|223221 COG0143, MetG, Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|153413 cd07959, Anticodon_Ia_Leu_AEc, Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 794
COG0060 933 IleS Isoleucyl-tRNA synthetase [Translation, ribos 100.0
PLN02843 974 isoleucyl-tRNA synthetase 100.0
PRK13804 961 ileS isoleucyl-tRNA synthetase; Provisional 100.0
KOG0433937 consensus Isoleucyl-tRNA synthetase [Translation, 100.0
PRK05743912 ileS isoleucyl-tRNA synthetase; Reviewed 100.0
PLN02882 1159 aminoacyl-tRNA ligase 100.0
PTZ00427 1205 isoleucine-tRNA ligase, putative; Provisional 100.0
PRK06039 975 ileS isoleucyl-tRNA synthetase; Reviewed 100.0
TIGR00392861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 100.0
COG0525 877 ValS Valyl-tRNA synthetase [Translation, ribosomal 100.0
PRK05729 874 valS valyl-tRNA synthetase; Reviewed 100.0
PLN02943 958 aminoacyl-tRNA ligase 100.0
PLN02381 1066 valyl-tRNA synthetase 100.0
PTZ00419 995 valyl-tRNA synthetase-like protein; Provisional 100.0
PRK14900 1052 valS valyl-tRNA synthetase; Provisional 100.0
TIGR00422 861 valS valyl-tRNA synthetase. The valyl-tRNA synthet 100.0
PRK13208800 valS valyl-tRNA synthetase; Reviewed 100.0
PLN02959 1084 aminoacyl-tRNA ligase 100.0
KOG0434 1070 consensus Isoleucyl-tRNA synthetase [Translation, 100.0
TIGR00395 938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 100.0
KOG0432 995 consensus Valyl-tRNA synthetase [Translation, ribo 100.0
PRK12300 897 leuS leucyl-tRNA synthetase; Reviewed 100.0
PRK00390805 leuS leucyl-tRNA synthetase; Validated 100.0
PF00133601 tRNA-synt_1: tRNA synthetases class I (I, L, M and 100.0
TIGR00396842 leuS_bact leucyl-tRNA synthetase, eubacterial and 100.0
PLN02563963 aminoacyl-tRNA ligase 100.0
COG0495814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 100.0
KOG0435876 consensus Leucyl-tRNA synthetase [Translation, rib 100.0
PLN02224616 methionine-tRNA ligase 100.0
KOG0437 1080 consensus Leucyl-tRNA synthetase [Translation, rib 100.0
PLN02610 801 probable methionyl-tRNA synthetase 100.0
COG0143558 MetG Methionyl-tRNA synthetase [Translation, ribos 100.0
PRK12267 648 methionyl-tRNA synthetase; Reviewed 100.0
PRK00133 673 metG methionyl-tRNA synthetase; Reviewed 100.0
PRK12268556 methionyl-tRNA synthetase; Reviewed 100.0
TIGR00398530 metG methionyl-tRNA synthetase. The methionyl-tRNA 100.0
KOG0436578 consensus Methionyl-tRNA synthetase [Translation, 100.0
PRK11893511 methionyl-tRNA synthetase; Reviewed 100.0
cd00817382 ValRS_core catalytic core domain of valyl-tRNA syn 100.0
PF09334391 tRNA-synt_1g: tRNA synthetases class I (M); InterP 100.0
cd00814319 MetRS_core catalytic core domain of methioninyl-tR 100.0
cd00818338 IleRS_core catalytic core domain of isoleucyl-tRNA 100.0
cd00668312 Ile_Leu_Val_MetRS_core catalytic core domain of is 100.0
KOG1247567 consensus Methionyl-tRNA synthetase [Translation, 99.97
PRK00260463 cysS cysteinyl-tRNA synthetase; Validated 99.97
cd00812314 LeuRS_core catalytic core domain of leucyl-tRNA sy 99.97
PTZ00399 651 cysteinyl-tRNA-synthetase; Provisional 99.96
cd07960180 Anticodon_Ia_Ile_BEm Anticodon-binding domain of b 99.95
TIGR00435465 cysS cysteinyl-tRNA synthetase. This model finds t 99.94
cd07961183 Anticodon_Ia_Ile_ABEc Anticodon-binding domain of 99.94
TIGR03447411 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino- 99.94
PLN02946557 cysteine-tRNA ligase 99.94
PRK12418384 cysteinyl-tRNA synthetase; Provisional 99.94
PRK14535699 cysS cysteinyl-tRNA synthetase; Provisional 99.93
PRK14536490 cysS cysteinyl-tRNA synthetase; Provisional 99.93
COG0215464 CysS Cysteinyl-tRNA synthetase [Translation, ribos 99.9
PRK14534481 cysS cysteinyl-tRNA synthetase; Provisional 99.89
PRK01611507 argS arginyl-tRNA synthetase; Reviewed 99.86
PF08264153 Anticodon_1: Anticodon-binding domain of tRNA; Int 99.85
PF13603185 tRNA-synt_1_2: Leucyl-tRNA synthetase, Domain 2; P 99.82
PF01406300 tRNA-synt_1e: tRNA synthetases class I (C) catalyt 99.75
cd07962135 Anticodon_Ia_Val Anticodon-binding domain of valyl 99.74
cd00671212 ArgRS_core catalytic core domain of arginyl-tRNA s 99.72
TIGR00456566 argS arginyl-tRNA synthetase. This model recognize 99.72
KOG2007586 consensus Cysteinyl-tRNA synthetase [Translation, 99.71
cd07959117 Anticodon_Ia_Leu_AEc Anticodon-binding domain of a 99.68
cd00674353 LysRS_core_class_I catalytic core domain of class 99.67
cd07957129 Anticodon_Ia_Met Anticodon-binding domain of methi 99.64
cd00672213 CysRS_core catalytic core domain of cysteinyl tRNA 99.62
cd07958117 Anticodon_Ia_Leu_BEm Anticodon-binding domain of b 99.56
PRK00750510 lysK lysyl-tRNA synthetase; Reviewed 99.46
COG0018577 ArgS Arginyl-tRNA synthetase [Translation, ribosom 99.44
PRK12451562 arginyl-tRNA synthetase; Reviewed 99.33
cd07375117 Anticodon_Ia_like Anticodon-binding domain of clas 99.33
TIGR00467515 lysS_arch lysyl-tRNA synthetase, archaeal and spir 99.25
cd00802143 class_I_aaRS_core catalytic core domain of class I 99.21
PLN02286576 arginine-tRNA ligase 99.08
PF00750354 tRNA-synt_1d: tRNA synthetases class I (R); InterP 98.85
cd09287240 GluRS_non_core catalytic core domain of non-discri 98.42
PRK04156567 gltX glutamyl-tRNA synthetase; Provisional 98.27
TIGR00463560 gltX_arch glutamyl-tRNA synthetase, archaeal and e 98.17
PLN03233523 putative glutamate-tRNA ligase; Provisional 98.13
TIGR03838272 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthe 98.1
PTZ00402601 glutamyl-tRNA synthetase; Provisional 98.09
cd00807238 GlnRS_core catalytic core domain of glutaminyl-tRN 98.08
PLN02907722 glutamate-tRNA ligase 98.05
PF00749314 tRNA-synt_1c: tRNA synthetases class I (E and Q), 98.03
COG0008472 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr 98.0
PTZ00437574 glutaminyl-tRNA synthetase; Provisional 97.99
TIGR00440522 glnS glutaminyl-tRNA synthetase. This protein is a 97.95
PRK12558445 glutamyl-tRNA synthetase; Provisional 97.94
PRK05710299 glutamyl-Q tRNA(Asp) synthetase; Reviewed 97.88
PRK05347554 glutaminyl-tRNA synthetase; Provisional 97.88
PRK12410433 glutamylglutaminyl-tRNA synthetase; Provisional 97.87
PRK14895513 gltX glutamyl-tRNA synthetase; Provisional 97.85
TIGR00464470 gltX_bact glutamyl-tRNA synthetase, bacterial fami 97.84
cd00418230 GlxRS_core catalytic core domain of glutamyl-tRNA 97.84
PLN02859788 glutamine-tRNA ligase 97.81
PRK14703 771 glutaminyl-tRNA synthetase/YqeY domain fusion prot 97.78
PLN02627535 glutamyl-tRNA synthetase 97.68
PRK01406476 gltX glutamyl-tRNA synthetase; Reviewed 97.52
cd00808239 GluRS_core catalytic core domain of discriminating 97.49
KOG4426656 consensus Arginyl-tRNA synthetase [Translation, ri 96.72
KOG1147712 consensus Glutamyl-tRNA synthetase [Translation, r 96.51
cd00817382 ValRS_core catalytic core domain of valyl-tRNA syn 95.98
KOG1148764 consensus Glutaminyl-tRNA synthetase [Translation, 95.85
PRK11893 511 methionyl-tRNA synthetase; Reviewed 95.79
PF01921360 tRNA-synt_1f: tRNA synthetases class I (K); InterP 95.49
COG1384521 LysS Lysyl-tRNA synthetase (class I) [Translation, 95.23
PRK12268 556 methionyl-tRNA synthetase; Reviewed 95.2
KOG1195567 consensus Arginyl-tRNA synthetase [Translation, ri 94.5
TIGR00398530 metG methionyl-tRNA synthetase. The methionyl-tRNA 94.49
KOG1149524 consensus Glutamyl-tRNA synthetase (mitochondrial) 94.27
cd00672213 CysRS_core catalytic core domain of cysteinyl tRNA 94.01
cd07956156 Anticodon_Ia_Arg Anticodon-binding domain of argin 92.92
COG0495 814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 92.78
cd00818338 IleRS_core catalytic core domain of isoleucyl-tRNA 92.25
PRK12267 648 methionyl-tRNA synthetase; Reviewed 90.34
cd00806280 TrpRS_core catalytic core domain of tryptophanyl-t 86.02
PRK12285368 tryptophanyl-tRNA synthetase; Reviewed 84.4
PLN02486383 aminoacyl-tRNA ligase 80.58
PLN02563 963 aminoacyl-tRNA ligase 80.16
>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information 
Probab=100.00  E-value=8.5e-158  Score=1382.25  Aligned_cols=644  Identities=46%  Similarity=0.821  Sum_probs=609.4

Q ss_pred             cccccccCCCccCCCCCCcccccHHHHHHHhhcCcchhccc--cCCCCcEEEEcCCCCCCCcccchHHHhHHHHHHHHHH
Q 003799          105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVAD--KNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRY  182 (794)
Q Consensus       105 ~~~~t~~lp~t~f~~r~n~~~~E~~~~~~W~~~~~~~~~~~--~~~~~~f~i~~~pPy~nG~lHiGHa~~~il~Dii~R~  182 (794)
                      .|++|||||+|.||||+|+..+|++++++|+++++|++..+  +.++++|++|||||||||.+|||||+|+|+||||.||
T Consensus         2 ~~k~tl~lp~T~fpmr~~l~~~E~~i~~~W~e~~iy~k~~~~~~~g~~~FvfhDGPPyANG~iHiGHalnKilKDiI~Ry   81 (933)
T COG0060           2 DYKDTLNLPKTDFPMRANLPKKEPKILKFWEENDIYEKIREERNKGKPKFVLHDGPPYANGNIHIGHALNKILKDIIVRY   81 (933)
T ss_pred             CccccccCccCCCCccCChhhcCHHHHHHHHHhhHHHHHHHHHhCCCCcEEEeCCCCCCCCCcchhhhHHHhhhhhhhhh
Confidence            58899999999999999999999999999999999999873  4688999999999999999999999999999999999


Q ss_pred             HHhCCCeeEEeccccCCCchHHHHHHhhchhh--hhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCccccCC
Q 003799          183 KLLQNYKVRYVPGWDCHGLPIELKVLQSLDED--AKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLD  260 (794)
Q Consensus       183 ~r~~G~~V~~~~G~D~hGlpie~~~~k~~~~~--~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~lGi~~dwd~~~~T~d  260 (794)
                      +.|+||+|.++|||||||||||.+++|+++..  +...++.++|+++|+++|.++++.|+++|+|||+|+||+++|.|||
T Consensus        82 ~~m~G~~v~~~pGWDcHGLPIE~~vek~lg~~k~~i~~~~~~efr~~Cr~~a~~~v~~q~~~f~RLGv~~Dw~npY~Tmd  161 (933)
T COG0060          82 KTMQGYDVPYVPGWDCHGLPIELKVEKKLGIGKKDIESFGVEEFREKCREFALEQVDEQKEQFKRLGVWGDWENPYKTMD  161 (933)
T ss_pred             hcccCCcCCCCCCCcCCCchHHHHHHHHhCCCcchhhhcCHHHHHHHHHHHHHHHHHHHHHHHHhheEeeccCCCeecCC
Confidence            99999999999999999999999999999842  3356889999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHHcCCeeecccCceeccCCCccccccccccCCcccccccceeEEeccCCCCcccccccccCCccce
Q 003799          261 PEYEAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLA  340 (794)
Q Consensus       261 ~~~~~~v~~~f~~L~~kGlIy~~~~~v~w~~~~~t~Lae~Evey~e~~~~~~~~v~F~l~~~~~~~~~~l~~~~~~~~l~  340 (794)
                      +.|++.++++|++|++|||||||.+||+|||+|+|+|||+||+|.+ +.++|+||+|++.+.+         ...+.+++
T Consensus       162 ~~ye~~~~~~f~~~~~kGllyrg~Kpv~wsp~c~TaLAeaEvey~d-~~dpSIyV~F~v~~~~---------~~~~~~lv  231 (933)
T COG0060         162 PSYEESVWWAFKELYEKGLLYRGYKPVPWSPRCETALAEAEVEYGD-VKDPSIYVKFPVKDEG---------LDENAYLV  231 (933)
T ss_pred             HHHHHHHHHHHHHHHHCCCeecCCeeeeecCCCCcchhhhhhcccc-cCCceEEEEEEeccCC---------CCCCcEEE
Confidence            9999999999999999999999999999999999999999999976 9999999999997641         12568999


Q ss_pred             eccCCCCccccccEEEECCCcceeeeeecccccCCCCCcCCCCCCCCCcccCCcceEeeecccchHHHHHhcCCc-eEEE
Q 003799          341 VWTTTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGTK-LVIK  419 (794)
Q Consensus       341 iwTT~PwTi~~n~av~v~p~~~Y~~v~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~iv~~~~~~~~~~~~~~~-~~~~  419 (794)
                      ||||||||||+|.||||||+.+|+++++.                         ++.+|||+++++++.+..|.+ ++++
T Consensus       232 iWTTTPWTLPaN~aiav~pd~~Y~lv~~~-------------------------~~~~IlA~~lve~~~~~~~~~~~~vl  286 (933)
T COG0060         232 IWTTTPWTLPANLAIAVHPDLDYVLVEVN-------------------------GEKLILAKALVESVAKKAGVEDYEVL  286 (933)
T ss_pred             EEeCCCCCchhcceeEeCCCcceEEEEEC-------------------------CEEEEEhHHHHHHHHHHcCCcceEEe
Confidence            99999999999999999999999999876                         489999999999999999987 8999


Q ss_pred             eeeccCcccCCeeecCCCC----CcccEEeccCcccccCCCCceeecCCCChhhHHHHHHhC-CCccccCCCCCcccccc
Q 003799          420 KTLAGSDLENCRYVHPVDN----RQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYG-LPILSPVDDEGKFTEEA  494 (794)
Q Consensus       420 ~~~~G~~L~g~~~~~Pl~~----~~~pvvi~~~~V~~~~GTG~Vh~aPaHg~~D~~~~~~~g-l~i~~~vd~~G~~~~~~  494 (794)
                      ++++|++|+|..|.|||..    +..|| +.+|||+.+.|||+||+|||||+|||.+|+++| +|+++|||++|+||+++
T Consensus       287 ~~~kG~~Leg~~y~hPf~~~~~~~~~~v-~~gd~VT~d~GTG~VHtAPghGeeDy~vg~~~g~l~v~~pVD~~G~yt~~~  365 (933)
T COG0060         287 ETFKGSELEGLRYEHPFYDFVYDRAFPV-ILGDHVTLDDGTGLVHTAPGHGEEDYEVGKKYGLLEVLNPVDDNGRYTEEA  365 (933)
T ss_pred             EEeehhhhCCCEeeCCcccccccceeeE-EecCeEecCCCccceecCCCCCHHHHHHHHHcCCcCCccccCCCccccccc
Confidence            9999999999999999995    77788 679999999999999999999999999999999 79999999999999999


Q ss_pred             CCCCCccccccchHHHHHHHHhcCCcccccccccccccccCCCCcEEEcccCccccchhhHHHHHHhhhcCeeecCCC--
Q 003799          495 GKFSGLDVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ--  572 (794)
Q Consensus       495 ~~~~G~~v~~ea~~~ii~~L~~~g~l~~~~~~~h~yp~~WRt~~pii~r~t~QWfi~~~~~~~~~l~~i~~v~~~P~~--  572 (794)
                      +.|.|+.+. +||+.||+.|+++|.|++.+.|.|+||||||||+|||||+|+|||++|+++|++|++++++|+|+|.+  
T Consensus       366 ~~~~G~~v~-dAn~~Ii~~Lk~~g~Ll~~e~i~HsYPhcWR~ktPlIyRAt~QWFi~v~~~r~~~l~~i~~v~w~P~~~~  444 (933)
T COG0060         366 PKYEGLFVK-DANKKIIEDLKEKGNLLKSEKIEHSYPHCWRTKTPLIYRATPQWFVSVDKLRDKMLKEINKVNWVPDWGK  444 (933)
T ss_pred             hhhCCceec-cCCHHHHHHHHhCCceeeeeeEEeCCCcccCCCCeeEEeecchheeEHHHHHHHHHHHHhcceEEChhHH
Confidence            999999995 99999999999999999999999999999999999999999999999999999999999999999998  


Q ss_pred             --------------------------------------------------------------------------------
Q 003799          573 --------------------------------------------------------------------------------  572 (794)
Q Consensus       573 --------------------------------------------------------------------------------  572 (794)
                                                                                                      
T Consensus       445 ~R~~~mve~r~DW~ISRQR~WGvPiPi~~~~~~g~~~~~~~El~e~~~~~~~~~g~~~w~~~~idel~~~~~~~g~~~~r  524 (933)
T COG0060         445 NRFGNMVENRPDWCISRQRYWGVPIPVWYCKETGEILVITEELEELVGQLVEEKGIDDWHRPDIDELLPPCPEDGKEYRR  524 (933)
T ss_pred             HHHHHHHcCCCcceeeccccCCCceeEEEECCCCCeeccHHHHHHHHHHHhhhcCchhhhccchHhhcCCCCCCcceeEe
Confidence                                                                                            


Q ss_pred             --------------------------------------------------------------------------------
Q 003799          573 --------------------------------------------------------------------------------  572 (794)
Q Consensus       573 --------------------------------------------------------------------------------  572 (794)
                                                                                                      
T Consensus       525 v~DvlDVWFDSGs~~~a~~~~~~~~~~~~~~aD~~lEGsDQ~RGWF~Ssl~~s~a~~~~aPYk~vltHGfvlDe~GrKMS  604 (933)
T COG0060         525 VPDVLDVWFDSGSTPYAVLHPRENLKFPALFADFYLEGSDQTRGWFYSSLLTSTALFGRAPYKNVLTHGFVLDEKGRKMS  604 (933)
T ss_pred             cCcceEEEEcCCCCcccccCCcccccCccccCcEEEEeccccchhHHHHHHHHHHHcCCchHHHHhhcccEECCCCCCcc
Confidence                                                                                            


Q ss_pred             -----------CCCCCCCchhhhhhhhcCCCCceecChHHHHHHHHHHHHHHhHHHHHHhcccCCCCCC-CcCCCCCChh
Q 003799          573 -----------EAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVGN-SISYDDLPMI  640 (794)
Q Consensus       573 -----------~~~~yGaD~lRl~las~~~~~Di~~s~~~l~~~~~~~~kl~Nt~rfll~nl~~~~~~~-~~~~~~l~~~  640 (794)
                                 ++++||||+||||++++++++|+.+|+++++++.+.|++||||+||+++|+++|+|.. .++..++..+
T Consensus       605 KSlGN~v~P~~V~~~yGADiLRLwv~ssd~~~dl~~s~~il~~~~~~~r~irNt~rF~l~nl~~fdp~~~~~~~~~~~~~  684 (933)
T COG0060         605 KSLGNVVDPQDVIDKYGADILRLWVASSDYWEDLRFSDEILKQVREVYRKIRNTYRFLLGNLDDFDPKKDAVLPEELREL  684 (933)
T ss_pred             ccCCCcCCHHHHHHhhCchheeeeeeecCchhccccCHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccccchhhcchh
Confidence                       3468999999999999999999999999999999999999999999999999999984 3566788999


Q ss_pred             hHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHhhhHHHHHhhccccccCCCChHhHHHHHHHHHHHHHHHHHHhc
Q 003799          641 DQYALFQLENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIA  720 (794)
Q Consensus       641 D~~il~~l~~lv~~v~~~~e~y~f~~ai~~l~~f~~~~lsn~Yle~~K~rly~~~~d~~~r~s~~~vL~~iL~~l~~lLa  720 (794)
                      |||+|+++++++++++++|++|+|++|++.|++|+.++||+|||+++|+|+|++..++.+|+++|++|+++|..++++||
T Consensus       685 Drwil~rl~~l~~~v~eaye~y~f~~v~~~l~~F~~~dLS~~Yld~~kdr~y~~~~~s~~rraa~~~Ly~il~~l~~~lA  764 (933)
T COG0060         685 DRWILSRLNSLVKEVREAYENYDFHKVVRALMNFVSEDLSNWYLDIIKDRLYTEAADSPDRRAAQTTLYHILKALVRLLA  764 (933)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhhHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHc
Confidence            99999999999999999999999999999999999999999999999999999988999999999999999999999999


Q ss_pred             cccchHHHHHHHhCCCCccccCCCCCCceeecCCCCCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhcCC
Q 003799          721 PILPHLAEDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNETEGF  791 (794)
Q Consensus       721 P~~P~~aEEiw~~L~~~~~~~~~~~~~sV~~~~wP~~~e~~~~~~~~~~~~~~~i~~lR~~v~~~~e~~~~  791 (794)
                      ||+||+|||+|++|+..      ...+|||++.||++++.+.+.+......|..++++|..+++++|.++.
T Consensus       765 PilPftaEeiw~~l~~~------~~~eSVhl~~~p~~~~~~~~~~~~~~~r~~~~~k~R~~v~~~l~~~r~  829 (933)
T COG0060         765 PILPFTAEEIWQNLPGE------RKEESVHLEDWPEVDEELIDVEAALAARWEALLKLRDPVNKALEAARL  829 (933)
T ss_pred             ccchhhHHHHHHhCccC------CCCceeEeccCCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999754      114799999999999887765566788899999999999999999874

>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>KOG0433 consensus Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02882 aminoacyl-tRNA ligase Back     alignment and domain information
>PTZ00427 isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK05729 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information
>PLN02381 valyl-tRNA synthetase Back     alignment and domain information
>PTZ00419 valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00422 valS valyl-tRNA synthetase Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02959 aminoacyl-tRNA ligase Back     alignment and domain information
>KOG0434 consensus Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>KOG0432 consensus Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK00390 leuS leucyl-tRNA synthetase; Validated Back     alignment and domain information
>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0435 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02224 methionine-tRNA ligase Back     alignment and domain information
>KOG0437 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02610 probable methionyl-tRNA synthetase Back     alignment and domain information
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK00133 metG methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK12268 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00398 metG methionyl-tRNA synthetase Back     alignment and domain information
>KOG0436 consensus Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>KOG1247 consensus Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK00260 cysS cysteinyl-tRNA synthetase; Validated Back     alignment and domain information
>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>PTZ00399 cysteinyl-tRNA-synthetase; Provisional Back     alignment and domain information
>cd07960 Anticodon_Ia_Ile_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases Back     alignment and domain information
>TIGR00435 cysS cysteinyl-tRNA synthetase Back     alignment and domain information
>cd07961 Anticodon_Ia_Ile_ABEc Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA synthetases Back     alignment and domain information
>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase Back     alignment and domain information
>PLN02946 cysteine-tRNA ligase Back     alignment and domain information
>PRK12418 cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14535 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14536 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK14534 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK01611 argS arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF08264 Anticodon_1: Anticodon-binding domain of tRNA; InterPro: IPR013155 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PF13603 tRNA-synt_1_2: Leucyl-tRNA synthetase, Domain 2; PDB: 2AJH_B 4ARI_A 2AJG_B 4AQ7_D 2AJI_B 4ARC_A 4AS1_A 2BTE_A 2V0G_A 2BYT_A Back     alignment and domain information
>PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd07962 Anticodon_Ia_Val Anticodon-binding domain of valyl tRNA synthetases Back     alignment and domain information
>cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>TIGR00456 argS arginyl-tRNA synthetase Back     alignment and domain information
>KOG2007 consensus Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd07959 Anticodon_Ia_Leu_AEc Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases Back     alignment and domain information
>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase Back     alignment and domain information
>cd07957 Anticodon_Ia_Met Anticodon-binding domain of methionyl tRNA synthetases Back     alignment and domain information
>cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase Back     alignment and domain information
>cd07958 Anticodon_Ia_Leu_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases Back     alignment and domain information
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12451 arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd07375 Anticodon_Ia_like Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains Back     alignment and domain information
>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete Back     alignment and domain information
>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>PLN02286 arginine-tRNA ligase Back     alignment and domain information
>PF00750 tRNA-synt_1d: tRNA synthetases class I (R); InterPro: IPR015945 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd09287 GluRS_non_core catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00463 gltX_arch glutamyl-tRNA synthetase, archaeal and eukaryotic family Back     alignment and domain information
>PLN03233 putative glutamate-tRNA ligase; Provisional Back     alignment and domain information
>TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase Back     alignment and domain information
>PTZ00402 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00807 GlnRS_core catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>PLN02907 glutamate-tRNA ligase Back     alignment and domain information
>PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PTZ00437 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00440 glnS glutaminyl-tRNA synthetase Back     alignment and domain information
>PRK12558 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK05710 glutamyl-Q tRNA(Asp) synthetase; Reviewed Back     alignment and domain information
>PRK05347 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12410 glutamylglutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14895 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family Back     alignment and domain information
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>PLN02859 glutamine-tRNA ligase Back     alignment and domain information
>PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>PLN02627 glutamyl-tRNA synthetase Back     alignment and domain information
>PRK01406 gltX glutamyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>KOG4426 consensus Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>KOG1148 consensus Glutaminyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF01921 tRNA-synt_1f: tRNA synthetases class I (K); InterPro: IPR002904 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>COG1384 LysS Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12268 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG1195 consensus Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00398 metG methionyl-tRNA synthetase Back     alignment and domain information
>KOG1149 consensus Glutamyl-tRNA synthetase (mitochondrial) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase Back     alignment and domain information
>cd07956 Anticodon_Ia_Arg Anticodon-binding domain of arginyl tRNA synthetases Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00806 TrpRS_core catalytic core domain of tryptophanyl-tRNA synthetase Back     alignment and domain information
>PRK12285 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02486 aminoacyl-tRNA ligase Back     alignment and domain information
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query794
1qu2_A 917 Insights Into Editing From An Ile-Trna Synthetase S 4e-56
1qu2_A 917 Insights Into Editing From An Ile-Trna Synthetase S 2e-36
1qu2_A917 Insights Into Editing From An Ile-Trna Synthetase S 4e-32
1jzq_A 821 Isoleucyl-Trna Synthetase Complexed With Isoleucyl- 7e-41
1jzq_A821 Isoleucyl-Trna Synthetase Complexed With Isoleucyl- 3e-09
1gax_A 862 Crystal Structure Of Thermus Thermophilus Valyl-Trn 2e-14
1wk8_A194 Isoleucyl-Trna Synthetase Editing Domain Complexed 7e-14
2v0c_A 878 Leucyl-Trna Synthetase From Thermus Thermophilus Co 1e-13
1obh_A 878 Leucyl-Trna Synthetase From Thermus Thermophilus Co 2e-13
4aq7_A 880 Ternary Complex Of E. Coli Leucyl-Trna Synthetase, 2e-12
4aq7_A 880 Ternary Complex Of E. Coli Leucyl-Trna Synthetase, 1e-04
1wny_A186 Isoleucyl-Trna Synthetase Editing Domain Length = 1 3e-12
1ue0_A182 Isoleucyl-Trna Synthetase Editing Domain Complexed 3e-11
1udz_A182 Isoleucyl-Trna Synthetase Editing Domain Length = 1 3e-11
1wkb_A 810 Crystal Structure Of Leucyl-Trna Synthetase From Th 2e-08
1wz2_A 967 The Crystal Structure Of Leucyl-Trna Synthetase And 2e-08
1wz2_A 967 The Crystal Structure Of Leucyl-Trna Synthetase And 7e-05
3h97_A560 Structure Of A Mutant Methionyl-trna Synthetase Wit 5e-07
1qqt_A551 Methionyl-Trna Synthetase From Escherichia Coli Len 5e-07
1f4l_A551 Crystal Structure Of The E.Coli Methionyl-Trna Synt 5e-07
1p7p_A551 Methionyl-trna Synthetase From Escherichia Coli Com 5e-07
3h9c_A547 Structure Of Methionyl-Trna Synthetase: Crystal For 5e-07
3ziu_A637 Crystal Structure Of Mycoplasma Mobile Leucyl-trna 2e-06
2x1l_A524 Crystal Structure Of Mycobacterium Smegmatis Methio 9e-06
2ajg_A196 Crystal Structure Of The Editing Domain Of E. Coli 3e-05
3o0a_A219 Crystal Structure Of The Wild Type Cp1 Hydrolitic D 7e-04
3pz0_A221 The Crystal Structure Of Aaleurs-Cp1 Length = 221 8e-04
3pz5_A201 The Crystal Structure Of Aaleurs-Cp1-D20 Length = 2 9e-04
>pdb|1QU2|A Chain A, Insights Into Editing From An Ile-Trna Synthetase Structure With Trna(Ile) And Mupirocin Length = 917 Back     alignment and structure 
Iteration: 1

 Score =  216 bits (550), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 110/215 (51%), Positives = 141/215 (65%), Gaps = 4/215 (1%)
Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y+ T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YEKTLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62
Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSXX 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE + L     D KK ++ +  
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIE-QALTKKGVDRKK-MSTAEF 120
Query: 225 XXXXXXXXXXXXXXQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
                         Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180
Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRM 319
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHDKR-SASIYVAFNV 214
>pdb|1QU2|A Chain A, Insights Into Editing From An Ile-Trna Synthetase Structure With Trna(Ile) And Mupirocin Length = 917 Back     alignment and structure
>pdb|1QU2|A Chain A, Insights Into Editing From An Ile-Trna Synthetase Structure With Trna(Ile) And Mupirocin Length = 917 Back     alignment and structure
>pdb|1JZQ|A Chain A, Isoleucyl-Trna Synthetase Complexed With Isoleucyl- Adenylate Analogue Length = 821 Back     alignment and structure
>pdb|1JZQ|A Chain A, Isoleucyl-Trna Synthetase Complexed With Isoleucyl- Adenylate Analogue Length = 821 Back     alignment and structure
>pdb|1GAX|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna Synthetase Complexed With Trna(Val) And Valyl-Adenylate Analogue Length = 862 Back     alignment and structure
>pdb|1WK8|A Chain A, Isoleucyl-Trna Synthetase Editing Domain Complexed With The Pre-Transfer Editing Substrate Analogue, Val-Ams Length = 194 Back     alignment and structure
>pdb|2V0C|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed With A Sulphamoyl Analogue Of Leucyl-Adenylate In The Synthetic Site And An Adduct Of Amp With 5-Fluoro-1,3- Dihydro-1-Hydroxy-2,1-Benzoxaborole (An2690) In The Editing Site Length = 878 Back     alignment and structure
>pdb|1OBH|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed With A Pre-Transfer Editing Substrate Analogue In Both Synthetic Active Site And Editing Site Length = 878 Back     alignment and structure
>pdb|4AQ7|A Chain A, Ternary Complex Of E. Coli Leucyl-Trna Synthetase, Trna(Leu) And Leucyl-Adenylate Analogue In The Aminoacylation Conformation Length = 880 Back     alignment and structure
>pdb|4AQ7|A Chain A, Ternary Complex Of E. Coli Leucyl-Trna Synthetase, Trna(Leu) And Leucyl-Adenylate Analogue In The Aminoacylation Conformation Length = 880 Back     alignment and structure
>pdb|1WNY|A Chain A, Isoleucyl-Trna Synthetase Editing Domain Length = 186 Back     alignment and structure
>pdb|1UE0|A Chain A, Isoleucyl-Trna Synthetase Editing Domain Complexed With L- Valine Length = 182 Back     alignment and structure
>pdb|1UDZ|A Chain A, Isoleucyl-Trna Synthetase Editing Domain Length = 182 Back     alignment and structure
>pdb|1WKB|A Chain A, Crystal Structure Of Leucyl-Trna Synthetase From The Archaeon Pyrococcus Horikoshii Reveals A Novel Editing Domain Orientation Length = 810 Back     alignment and structure
>pdb|1WZ2|A Chain A, The Crystal Structure Of Leucyl-Trna Synthetase And Trna(Leucine) Complex Length = 967 Back     alignment and structure
>pdb|1WZ2|A Chain A, The Crystal Structure Of Leucyl-Trna Synthetase And Trna(Leucine) Complex Length = 967 Back     alignment and structure
>pdb|3H97|A Chain A, Structure Of A Mutant Methionyl-trna Synthetase With Modified Specificity Length = 560 Back     alignment and structure
>pdb|1QQT|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Length = 551 Back     alignment and structure
>pdb|1F4L|A Chain A, Crystal Structure Of The E.Coli Methionyl-Trna Synthetase Complexed With Methionine Length = 551 Back     alignment and structure
>pdb|1P7P|A Chain A, Methionyl-trna Synthetase From Escherichia Coli Complexed With Methionine Phosphonate Length = 551 Back     alignment and structure
>pdb|3H9C|A Chain A, Structure Of Methionyl-Trna Synthetase: Crystal Form 2 Length = 547 Back     alignment and structure
>pdb|3ZIU|A Chain A, Crystal Structure Of Mycoplasma Mobile Leucyl-trna Synthetase With Leu-ams In The Active Site Length = 637 Back     alignment and structure
>pdb|2X1L|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Methionyl-Trna Synthetase In Complex With Methionine And Adenosine Length = 524 Back     alignment and structure
>pdb|2AJG|A Chain A, Crystal Structure Of The Editing Domain Of E. Coli Leucyl- Trna Synthetase Length = 196 Back     alignment and structure
>pdb|3O0A|A Chain A, Crystal Structure Of The Wild Type Cp1 Hydrolitic Domain From Aquifex Aeolicus Leucyl-Trna Length = 219 Back     alignment and structure
>pdb|3PZ0|A Chain A, The Crystal Structure Of Aaleurs-Cp1 Length = 221 Back     alignment and structure
>pdb|3PZ5|A Chain A, The Crystal Structure Of Aaleurs-Cp1-D20 Length = 201 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query794
1ffy_A 917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 0.0
1ffy_A917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 2e-79
1ile_A 821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 1e-162
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 8e-42
1wz2_A 967 Leucyl-tRNA synthetase; ligase, riken structural g 6e-92
1wz2_A 967 Leucyl-tRNA synthetase; ligase, riken structural g 4e-22
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 1e-82
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 4e-17
1wny_A186 Isoleucyl-tRNA synthetase; ligase, structural geno 2e-58
2wfd_A252 Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRN 1e-37
3pz6_A311 Leurs, leucyl-tRNA synthetase; editing domain, gll 2e-33
2wfg_A261 Cytosolic leucyl-tRNA synthetase; ligase, editing 1e-28
1gax_A 862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 7e-26
1gax_A 862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 1e-18
1gax_A 862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 2e-11
2v0c_A 878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 2e-14
2v0c_A 878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 3e-06
2v0c_A878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 2e-04
4arc_A 880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 9e-14
4arc_A 880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 1e-06
4arc_A880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 1e-04
3tun_A542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 3e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-05
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 5e-12
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 1e-11
2x1l_A524 Methionyl-tRNA synthetase; nucleotide-binding, pro 2e-11
4dlp_A536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 2e-11
1rqg_A722 Methionyl-tRNA synthetase; translation, dimerizati 2e-11
1rqg_A 722 Methionyl-tRNA synthetase; translation, dimerizati 6e-04
3kfl_A564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 9e-11
3h99_A560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 1e-10
1wka_A147 Valyl-tRNA synthetase; editing, CP1, fidelity, the 6e-10
2ajg_A196 Leucyl-tRNA synthetase; editing domain, ligase; 2. 2e-07
3o0a_A219 Leucyl-tRNA synthetase subunit alpha; CP1 hydrolyt 6e-07
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Length = 917 Back     alignment and structure
 Score =  687 bits (1776), Expect = 0.0
 Identities = 201/471 (42%), Positives = 278/471 (59%), Gaps = 41/471 (8%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y+ T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YEKTLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE  + +   +  +K ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVD--RKKMSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWTT 344
           KPV+WSPSS ++LAEAE+EY +   S SIY  F +                D    +WTT
Sbjct: 181 KPVYWSPSSESSLAEAEIEYHD-KRSASIYVAFNVKDDK-------GVVDADAKFIIWTT 232

Query: 345 TPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDL 404
           TPWT+P+N A+ V+ +L+Y    +     G+                       I+A  L
Sbjct: 233 TPWTIPSNVAITVHPELKYGQYNV----NGE---------------------KYIIAEAL 267

Query: 405 VPTLEAKWG---TKLVIKKTLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHT 461
              +          + ++K   G +LE     HP  +R+   VI GD++TT++GTG VHT
Sbjct: 268 SDAVAEALDWDKASIKLEKEYTGKELEWVVAQHPFLDRESL-VINGDHVTTDAGTGCVHT 326

Query: 462 APGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGLDVLGDGNVAVVKYLDEQMSLI 521
           APGHG++DY+   +Y LP++SP+DD+G FTEE G+F G+      N AV   L E+ +L+
Sbjct: 327 APGHGEDDYIVGQQYELPVISPIDDKGVFTEEGGQFEGMFYD-KANKAVTDLLTEKGALL 385

Query: 522 MEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ 572
             +   H YP+DWRTKKP IFRAT QWFAS+   RQ  +DAI    +    
Sbjct: 386 KLDFITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAIENTNFKVNW 436
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Length = 917 Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Length = 821 Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Length = 821 Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Length = 967 Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Length = 967 Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Length = 810 Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Length = 810 Back     alignment and structure
>1wny_A Isoleucyl-tRNA synthetase; ligase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.60A {Thermus thermophilus} PDB: 1wnz_A* 1wk8_A* 1udz_A 1ue0_A Length = 186 Back     alignment and structure
>2wfd_A Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRNA synthetase, phosphoprotein, editing domain, nucleotide-binding, hydrolysis of MIS-charged trnas; 3.25A {Homo sapiens} Length = 252 Back     alignment and structure
>3pz6_A Leurs, leucyl-tRNA synthetase; editing domain, glleurs_CP1, ligase; 2.60A {Giardia intestinalis} Length = 311 Back     alignment and structure
>2wfg_A Cytosolic leucyl-tRNA synthetase; ligase, editing domain, hydrolysis of MIS-charged trnas, benzoxaborole, anti-fungal; HET: ZZB; 2.20A {Candida albicans} PDB: 2wfe_A* Length = 261 Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Length = 862 Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Length = 862 Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Length = 862 Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Length = 878 Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Length = 878 Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Length = 878 Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Length = 880 Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Length = 880 Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Length = 880 Back     alignment and structure
>3tun_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, translation, nucleotide binding; HET: C13; 2.55A {Trypanosoma brucei} Length = 542 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Length = 497 Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Length = 500 Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Length = 524 Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Length = 536 Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Length = 722 Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Length = 722 Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Length = 564 Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Length = 560 Back     alignment and structure
>1wka_A Valyl-tRNA synthetase; editing, CP1, fidelity, thermus thrmophilus, translation, amino acid, structural genomics; 1.70A {Thermus thermophilus} SCOP: b.51.1.1 PDB: 1wk9_A* Length = 147 Back     alignment and structure
>2ajg_A Leucyl-tRNA synthetase; editing domain, ligase; 2.00A {Escherichia coli} PDB: 2ajh_A 2aji_A Length = 196 Back     alignment and structure
>3o0a_A Leucyl-tRNA synthetase subunit alpha; CP1 hydrolytic DOM ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide- protein biosynthesis; 1.77A {Aquifex aeolicus} PDB: 3pz0_A 3pz5_A Length = 219 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query794
1ffy_A917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 100.0
1gax_A 862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 100.0
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 100.0
1wz2_A 967 Leucyl-tRNA synthetase; ligase, riken structural g 100.0
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 100.0
2v0c_A878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 100.0
4arc_A880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 100.0
3u1f_A542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 100.0
1rqg_A 722 Methionyl-tRNA synthetase; translation, dimerizati 100.0
3kfl_A564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 100.0
4dlp_A536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 100.0
3h99_A560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 100.0
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 100.0
2x1l_A524 Methionyl-tRNA synthetase; nucleotide-binding, pro 100.0
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 100.0
1wny_A186 Isoleucyl-tRNA synthetase; ligase, structural geno 100.0
3o0a_A219 Leucyl-tRNA synthetase subunit alpha; CP1 hydrolyt 100.0
1wka_A147 Valyl-tRNA synthetase; editing, CP1, fidelity, the 100.0
2wfg_A261 Cytosolic leucyl-tRNA synthetase; ligase, editing 99.98
2ajg_A196 Leucyl-tRNA synthetase; editing domain, ligase; 2. 99.97
3tqo_A462 Cysteinyl-tRNA synthetase; protein synthesis, liga 99.97
2wfd_A252 Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRN 99.97
3pz6_A311 Leurs, leucyl-tRNA synthetase; editing domain, gll 99.96
3sp1_A501 Cysteinyl-tRNA synthetase; structural genomics, se 99.96
3c8z_A414 Cysteinyl-tRNA synthetase; cysteine ligase, rossma 99.96
1li5_A461 Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys 99.95
1iq0_A592 Arginyl-tRNA synthetase; riken structural genomics 99.84
2zue_A629 Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase 99.8
3fnr_A464 Arginyl-tRNA synthetase; transferase, PSI-2, NYSGX 99.8
1irx_A523 Lysyl-tRNA synthetase; beta sandwitch, zinc-bindin 99.68
1f7u_A607 Arginyl-tRNA synthetase; RNA-protein complex, amin 99.21
1nzj_A298 Hypothetical protein YADB; Zn cluster, glutamyl T- 98.27
3aii_A553 Glutamyl-tRNA synthetase; amino-acyl tRNA syntheta 98.21
1qtq_A553 GLNRS, protein (glutaminyl-tRNA synthetase); gluta 98.19
2o5r_A481 Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g 98.08
3al0_C592 Glutamyl-tRNA(Gln) amidotransferase subunit C, GL 98.04
2hz7_A 851 Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c 98.03
4g6z_A490 Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, 98.0
2cfo_A492 Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA s 97.93
3afh_A488 Glutamyl-tRNA synthetase 2; protein-substrate comp 97.8
1j09_A468 Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, r 97.78
4gri_A512 Glutamate--tRNA ligase; structural genomics, seatt 97.77
2ja2_A498 Glutamyl-tRNA synthetase; non-discriminating gluta 97.73
1rqg_A 722 Methionyl-tRNA synthetase; translation, dimerizati 95.27
3u1f_A 542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 93.82
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 93.58
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 90.38
3tzl_A322 Tryptophanyl-tRNA synthetase; structural genomics, 88.45
2cyb_A323 Tyrosyl-tRNA synthetase; rossmann-fold, structural 88.4
2x1l_A 524 Methionyl-tRNA synthetase; nucleotide-binding, pro 88.08
2cya_A364 Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, st 87.06
1i6k_A328 TRPRS, tryptophanyl-tRNA synthetase; class I tRNA 86.53
1f7u_A607 Arginyl-tRNA synthetase; RNA-protein complex, amin 85.98
4dlp_A 536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 85.53
2dlc_X394 Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligas 84.94
2pid_A356 Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase 82.21
3h99_A 560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 81.28
3jxe_A392 Tryptophanyl-tRNA synthetase; adenosine triphospha 80.78
2zp1_A314 Tyrosyl-tRNA synthetase; tRNA synthetases class I, 80.67
1n3l_A372 Tyrosyl-tRNA synthetase; rossmann fold AS catalyti 80.21
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Back     alignment and structure
Probab=100.00  E-value=1.3e-134  Score=1230.87  Aligned_cols=638  Identities=44%  Similarity=0.764  Sum_probs=585.3

Q ss_pred             cccccccCCCccCCCCCCcccccHHHHHHHhhcCcchhccc-cCCCCcEEEEcCCCCCCCcccchHHHhHHHHHHHHHHH
Q 003799          105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVAD-KNDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYK  183 (794)
Q Consensus       105 ~~~~t~~lp~t~f~~r~n~~~~E~~~~~~W~~~~~~~~~~~-~~~~~~f~i~~~pPy~nG~lHiGHa~~~il~Dii~R~~  183 (794)
                      +||+|||||+|.||||+|+..+|++||++|+++++|++..+ +.++++|+|++|||||||.||||||+|++++|+++||+
T Consensus         2 ~y~~tl~lp~t~fpm~~~~~~~E~~~~~~W~~~~~f~~~~~~~~~~~~f~i~~~pPY~nG~lHiGHa~n~~~~Dii~Ry~   81 (917)
T 1ffy_A            2 DYEKTLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYK   81 (917)
T ss_dssp             CSGGGSCCCCCCCCSSCCHHHHHHHHHHHHHHTTHHHHHHHHTTTSCBCCEECCCCBSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred             chhhhhcCCCCCCCCCCChHHHhHHHHHHHHHCCCcccchhhccCCCceeeCCCCCCCCCcchHHHHHHHHHHHHHHHHH
Confidence            59999999999999999999999999999999999998753 34688999999999999999999999999999999999


Q ss_pred             HhCCCeeEEeccccCCCchHHHHHHhhchhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCccccCChHH
Q 003799          184 LLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEY  263 (794)
Q Consensus       184 r~~G~~V~~~~G~D~hGlpie~~~~k~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~lGi~~dwd~~~~T~d~~~  263 (794)
                      ||+||+|+|+|||||||+|||.+|+|. +. ...++++++|+++|++|+.++++.|+++|++||+++||+++|+||||.|
T Consensus        82 rm~G~~v~~~~GwD~hGlpiE~~a~k~-G~-~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~rlG~~~Dwd~~~~T~d~~~  159 (917)
T 1ffy_A           82 TMQGFYAPYVPGWDTHGLPIEQALTKK-GV-DRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEY  159 (917)
T ss_dssp             HTTTCBCCCCCEEBCCSHHHHHHHHHH-TC-CSTTTCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSCTTSCEETTSHHH
T ss_pred             HhCCCCCCCcccCchhhHHHHHHHHHc-CC-CchhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCeEEccCCCeEcCCHHH
Confidence            999999999999999999999999987 32 2456889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCeeecccCceeccCCCccccccccccCCcccccccceeEEeccCCCCcccccccccCCccceecc
Q 003799          264 EAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEYPEGHVSRSIYAVFRMVSAPPSTSGLLNEFLPDLGLAVWT  343 (794)
Q Consensus       264 ~~~v~~~f~~L~~kGlIy~~~~~v~w~~~~~t~Lae~Evey~e~~~~~~~~v~F~l~~~~~~~~~~l~~~~~~~~l~iwT  343 (794)
                      ++.++++|.+|+++|+||++.++|+|||.|+|+|||+||+|.+ +.++++||+|++.+..    ..++   .+.+++|||
T Consensus       160 ~~~v~~~F~~l~~kGliYr~~~~v~wcp~~~T~Lae~eVey~d-~~~~~~~v~f~~~~~~----g~~~---~~~~~~i~T  231 (917)
T 1ffy_A          160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEYHD-KRSASIYVAFNVKDDK----GVVD---ADAKFIIWT  231 (917)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEEEEEEETTTTEECCGGGEEEEE-EEEEEEECCBCCCSST----TGGG---TTCCBCCEE
T ss_pred             HHHHHHHHHHHHHcCCeEecccceeccCCCCcCcchhhhhccc-ccCceEEEEEEecccc----cccC---CCCeEEEEe
Confidence            9999999999999999999999999999999999999999966 7889999999986521    0111   257899999


Q ss_pred             CCCCccccccEEEECCCcceeeeeecccccCCCCCcCCCCCCCCCcccCCcceEeeecccchHHHHHhcCC-ceE--EEe
Q 003799          344 TTPWTVPANAAVAVNAKLQYAVVEIQSLLEGDSAAPANKKSRPGNVLKDQKKVFIIVASDLVPTLEAKWGT-KLV--IKK  420 (794)
Q Consensus       344 T~PwTi~~n~av~v~p~~~Y~~v~~~~~~~~~s~~~~~~~~~~g~~~~~~~~~~~iv~~~~~~~~~~~~~~-~~~--~~~  420 (794)
                      |||||||||+||||||++.|+++++.                         ++.+++++++++.+....+. .++  ++.
T Consensus       232 TrP~Tl~~~~av~v~p~~~Y~~v~~~-------------------------~~~~i~a~~~~~~~~~~~~~~~~~~~~~~  286 (917)
T 1ffy_A          232 TTPWTIPSNVAITVHPELKYGQYNVN-------------------------GEKYIIAEALSDAVAEALDWDKASIKLEK  286 (917)
T ss_dssp             SCGGGSSCCBCCCCCTTCCCCCCCTT-------------------------TTCCCCCHHHHHHHHTTTTCCSSCCCCCC
T ss_pred             CCcchhhhceEEEECCCCceEEEEeC-------------------------CceeehHHHHHHHHHHhcCcccceeeeee
Confidence            99999999999999999999988753                         35799999999999988775 355  789


Q ss_pred             eeccCcccCCeeecCCCCCcccEEeccCcccccCCCCceeecCCCChhhHHHHHHhCCCccccCCCCCccccccCCCCCc
Q 003799          421 TLAGSDLENCRYVHPVDNRQCPVVIGGDYITTESGTGLVHTAPGHGQEDYVTSLKYGLPILSPVDDEGKFTEEAGKFSGL  500 (794)
Q Consensus       421 ~~~G~~L~g~~~~~Pl~~~~~pvvi~~~~V~~~~GTG~Vh~aPaHg~~D~~~~~~~gl~i~~~vd~~G~~~~~~~~~~G~  500 (794)
                      +++|++|+|+++.||++++++|| +.++||++++|||+||+|||||++||+++++||||++++||++|+|+++.|+|.|+
T Consensus       287 ~~~G~~l~g~~~~~P~~~~~~pv-i~~~~V~~~~GTG~V~~~Pah~~~D~~~~~~~~L~~~~~vd~~G~~~~~~~~~~G~  365 (917)
T 1ffy_A          287 EYTGKELEWVVAQHPFLDRESLV-INGDHVTTDAGTGCVHTAPGHGEDDYIVGQQYELPVISPIDDKGVFTEEGGQFEGM  365 (917)
T ss_dssp             CCCTTTCTTCCCBCCTTCCSBCC-CCCCSSCCSSSCSCCCBCTTSCSHHHHTTTSSSCCCCCCCCSSSCCCTTCSSCSSS
T ss_pred             eeecccccCCEEECCCCCCeeeE-EeccccccCCCCceeEeCCCCCHHHHHHHHHcCCCeeeeECCCceeCCcccccCCc
Confidence            99999999999999999999999 67999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccchHHHHHHHHhcCCcccccccccccccccCCCCcEEEcccCccccchhhHHHHHHhhhcCeeecCCC--------
Q 003799          501 DVLGDGNVAVVKYLDEQMSLIMEEPYEHKYPYDWRTKKPTIFRATEQWFASVEGFRQAAMDAIGQVKWVPPQ--------  572 (794)
Q Consensus       501 ~v~~ea~~~ii~~L~~~g~l~~~~~~~h~yp~~WRt~~pii~r~t~QWfi~~~~~~~~~l~~i~~v~~~P~~--------  572 (794)
                      +++ +|++.|++.|++.|.+++.+.+.|+||||||||+|||||+++|||++++++|+++++++++++|+|++        
T Consensus       366 ~v~-~A~~~Ii~~L~~~g~l~~~~~~~hs~p~c~R~~~pv~~r~t~QWFi~~~~lr~~~l~~i~~~~~~P~~~~~r~~~~  444 (917)
T 1ffy_A          366 FYD-KANKAVTDLLTEKGALLKLDFITHSYPHDWRTKKPVIFRATPQWFASISKVRQDILDAIENTNFKVNWGKTRIYNM  444 (917)
T ss_dssp             CSS-HHHHTTGGGSSHHHHCCCCEEEEEEEEEETTTCCBCEEEEEEEEEECHHHHHHHHHHHHHTSEESSHHHHHHHHHH
T ss_pred             CHH-HHHHHHHHHHHhCCCccccccccccCCEecCCCCEEEEEeccceEeeHHHHHHHHHHHHhcCcccCHHHHHHHHHH
Confidence            997 99999999999999999999999999999999999999999999999999999999999888776643        


Q ss_pred             --------------------------------------------------------------------------------
Q 003799          573 --------------------------------------------------------------------------------  572 (794)
Q Consensus       573 --------------------------------------------------------------------------------  572 (794)
                                                                                                      
T Consensus       445 l~~~~DW~ISRqr~WG~PIP~~~~~~g~~~~~~~~~~~i~~~~~~~g~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~D~  524 (917)
T 1ffy_A          445 VRDRGEWVISRQRVWGVPLPVFYAENGEIIMTKETVNHVADLFAEHGSNIWFEREAKDLLPEGFTHPGSPNGTFTKETDI  524 (917)
T ss_dssp             HHHCCCEECEESCSSSCBCCCEECTTSCEECCHHHHHHHHHHHHHHCTHHHHHSCHHHHSSTTCCCSSCTTSCCEECCCE
T ss_pred             HhcCccceeeccCCcCcccceeeCCCCCEecCHHHHHHHHHHhhhcCCcccccCCHHHhcccccccccCCcccccccCCC
Confidence                                                                                            


Q ss_pred             --------------------------------------------------------------------------------
Q 003799          573 --------------------------------------------------------------------------------  572 (794)
Q Consensus       573 --------------------------------------------------------------------------------  572 (794)
                                                                                                      
T Consensus       525 lD~WfdSg~~~~~~l~~~~~~~~P~Dl~~~G~D~~r~wf~~~l~~s~~~~g~~Pfk~v~~hG~V~d~~G~KMSKSlGNvV  604 (917)
T 1ffy_A          525 MDVWFDSGSSHRGVLETRPELSFPADMYLEGSDQYRGWFNSSITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVI  604 (917)
T ss_dssp             ECHHHHHHTHHHHTTTTSTTCCSSBSEEEEEGGGGTTHHHHHHHHHHHHHSSCSBSEEEEECCEECTTSCCCCSSSSCCC
T ss_pred             cCeecCCCCCHHHHcCCchhcCCCceEEEEEecccccHHHHHHHHHHHhhCCCcccceeEeeeEEcCCCcCcccccCCcC
Confidence                                                                                            


Q ss_pred             ----CCCCCCCchhhhhhhhcCCCCceecChHHHHHHHHHHHHHHhHHHHHHhcccCCCCC-CCcCCCCCChhhHHHHHH
Q 003799          573 ----EAPGYGADVLRLWVSSVDYTGDVMIGPQVLRQMSDIYRKLRGTLRYLLGNLHDWRVG-NSISYDDLPMIDQYALFQ  647 (794)
Q Consensus       573 ----~~~~yGaD~lRl~las~~~~~Di~~s~~~l~~~~~~~~kl~Nt~rfll~nl~~~~~~-~~~~~~~l~~~D~~il~~  647 (794)
                          ++++||+|++|||++++++++|++|+++.++++.++++||+|++||+++|+.+|.+. ..++..++..+|+|++++
T Consensus       605 ~P~dvi~~yGaDalR~~lls~~~~~D~~fs~~~l~~~~~~~~kl~n~~r~~l~nl~~~~~~~~~v~~~~l~~~D~~il~~  684 (917)
T 1ffy_A          605 VPDQVVKQKGADIARLWVSSTDYLADVRISDEILKQTSDDYRKIRNTLRFMLGNINDFNPDTDSIPESELLEVDRYLLNR  684 (917)
T ss_dssp             CHHHHHHHTCHHHHHHHHHTSCTTSCEECCHHHHHHHHHHHHHHHHHHHHHHHTSTTCCHHHHCCCGGGSCHHHHHHHHH
T ss_pred             ChHHHHHhCCHHHHHHHHhccCCCCCcccCHHHHHHHHHHHHHHHHHHHHHHhhhhccCcccccCCccccCHHHHHHHHH
Confidence                224799999999999999999999999999999999999999999999999887642 223344567899999999


Q ss_pred             HHHHHHHHHHHHhcccHHHHHHHHHHHHHHhhhHHHHHhhccccccCCCChHhHHHHHHHHHHHHHHHHHHhccccchHH
Q 003799          648 LENIVKNIRESYESYQFFKIFQIIQRFIIVDLSNFYFDVAKDRLYTGGTTSFTRRSCQTVLSAHLLSIVRVIAPILPHLA  727 (794)
Q Consensus       648 l~~lv~~v~~~~e~y~f~~ai~~l~~f~~~~lsn~Yle~~K~rly~~~~d~~~r~s~~~vL~~iL~~l~~lLaP~~P~~a  727 (794)
                      +++++++++++|++|+|++|++.|++|+++++||+|++++|+|+|+++.++..|++++++|+++++.+++||||||||+|
T Consensus       685 l~~~~~~v~~a~e~~~f~~a~~~l~~f~~~~l~~~Yl~~~k~rl~~~~~~~~~r~~~~~~l~~~l~~l~~lLaP~~P~~a  764 (917)
T 1ffy_A          685 LREFTASTINNYENFDYLNIYQEVQNFINVELSNFYLDYGKDILYIEQRDSHIRRSMQTVLYQILVDMTKLLAPILVHTA  764 (917)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHCCCCCCHHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHHHHHHTTTSHHHH
T ss_pred             HHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCcHHHHHHHHHHHHHHHHHHHHhcccccHHH
Confidence            99999999999999999999999999998789999999999999998766677889999999999999999999999999


Q ss_pred             HHHHHhCCCCccccCCCCCCceeecCCCCCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhcC
Q 003799          728 EDVWQNLPFAYTLEDGSAAEFVFESKWPVLDEKWRTFPVGEIYFWGKILEVIVVVTYLNETEG  790 (794)
Q Consensus       728 EEiw~~L~~~~~~~~~~~~~sV~~~~wP~~~e~~~~~~~~~~~~~~~i~~lR~~v~~~~e~~~  790 (794)
                      ||||++|+..       ..+|||.+.||++++  .  ++.+++.|+.++++|+.|+++++.+|
T Consensus       765 Eeiw~~l~~~-------~~~sv~~~~wP~~~~--~--~~~l~~~~~~~~~v~~~v~~~~~~~R  816 (917)
T 1ffy_A          765 EEVWSHTPHV-------KEESVHLADMPKVVE--V--DQALLDKWRTFMNLRDDVNRALETAR  816 (917)
T ss_dssp             HHHHTTSTTC-------SSSSGGGSCCCCCCC--C--CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcccC-------CCCCeEecCCCCCCc--c--hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999742       136999999999875  2  36778889999999999999988765
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Back     alignment and structure
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Back     alignment and structure
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Back     alignment and structure
>3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A* Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Back     alignment and structure
>1wny_A Isoleucyl-tRNA synthetase; ligase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.60A {Thermus thermophilus} PDB: 1wnz_A* 1wk8_A* 1udz_A 1ue0_A Back     alignment and structure
>3o0a_A Leucyl-tRNA synthetase subunit alpha; CP1 hydrolytic DOM ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide- protein biosynthesis; 1.77A {Aquifex aeolicus} PDB: 3pz0_A 3pz5_A Back     alignment and structure
>1wka_A Valyl-tRNA synthetase; editing, CP1, fidelity, thermus thrmophilus, translation, amino acid, structural genomics; 1.70A {Thermus thermophilus} SCOP: b.51.1.1 PDB: 1wk9_A* Back     alignment and structure
>2wfg_A Cytosolic leucyl-tRNA synthetase; ligase, editing domain, hydrolysis of MIS-charged trnas, benzoxaborole, anti-fungal; HET: ZZB; 2.20A {Candida albicans} PDB: 2wfe_A* Back     alignment and structure
>2ajg_A Leucyl-tRNA synthetase; editing domain, ligase; 2.00A {Escherichia coli} PDB: 2ajh_A 2aji_A Back     alignment and structure
>3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii} Back     alignment and structure
>2wfd_A Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRNA synthetase, phosphoprotein, editing domain, nucleotide-binding, hydrolysis of MIS-charged trnas; 3.25A {Homo sapiens} Back     alignment and structure
>3pz6_A Leurs, leucyl-tRNA synthetase; editing domain, glleurs_CP1, ligase; 2.60A {Giardia intestinalis} Back     alignment and structure
>3sp1_A Cysteinyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, LYME disease; HET: AMP; 2.55A {Borrelia burgdorferi} Back     alignment and structure
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis} Back     alignment and structure
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B Back     alignment and structure
>1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Back     alignment and structure
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Back     alignment and structure
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Back     alignment and structure
>1irx_A Lysyl-tRNA synthetase; beta sandwitch, zinc-binding structure, rossmann fold, alpha-helix CAGE; 2.60A {Pyrococcus horikoshii} SCOP: a.97.1.2 c.26.1.1 Back     alignment and structure
>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Back     alignment and structure
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A* Back     alignment and structure
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A Back     alignment and structure
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} Back     alignment and structure
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} Back     alignment and structure
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>4g6z_A Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, AARS, class 1B AARS, ATP-dependen charging, protein synthesis, structural genomics; HET: GLU; 2.05A {Burkholderia thailandensis} Back     alignment and structure
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus} Back     alignment and structure
>3afh_A Glutamyl-tRNA synthetase 2; protein-substrate complex, aminoacyl-tRNA synthetase, ATP-binding, ligase, nucleotide-binding; HET: GSU; 2.00A {Thermotoga maritima} PDB: 3akz_B* Back     alignment and structure
>1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A Back     alignment and structure
>4gri_A Glutamate--tRNA ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, aminoacyl-tRNA synthetase; HET: GLU; 2.60A {Borrelia burgdorferi} Back     alignment and structure
>2ja2_A Glutamyl-tRNA synthetase; non-discriminating glutamyl-tRNA aminoacylation, protein biosynthesis, aminoacyl-tRNA synthetase, ligase; 1.65A {Mycobacterium tuberculosis} PDB: 3pny_A 3pnv_A Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Back     alignment and structure
>3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A* Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Back     alignment and structure
>3tzl_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure; HET: ADP TRP; 2.15A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3m5w_A* Back     alignment and structure
>2cyb_A Tyrosyl-tRNA synthetase; rossmann-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TYR; 1.80A {Archaeoglobus fulgidus} Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Back     alignment and structure
>2cya_A Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, structural genomics, NPPSFA, national on protein structural and functional analyses; 2.20A {Aeropyrum pernix} Back     alignment and structure
>1i6k_A TRPRS, tryptophanyl-tRNA synthetase; class I tRNA synthetase, AARS, induced FIT, ligase; HET: TYM; 1.72A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 1i6l_A* 1i6m_A* 1m83_A* 1mau_A* 1maw_A* 1mb2_A* 2ov4_A* 3fhj_A* 3fi0_A* 1d2r_A 3u1v_A Back     alignment and structure
>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Back     alignment and structure
>2dlc_X Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligase-tRNA complex; HET: 2MG OMG M2G PSU 6IA 5MC 5MU 1MA YMP; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2pid_A Tyrosyl-tRNA synthetase; aminoacyl-tRNA synthetase, protein-substrate complex, ATP-BI ligase, mitochondrion, nucleotide-binding, protein biosynth; HET: YSA; 2.20A {Homo sapiens} PDB: 3zxi_A* Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Back     alignment and structure
>3jxe_A Tryptophanyl-tRNA synthetase; adenosine triphosphate, rossmann fold, crystallography, X-RAY, P. horikoshii, aminoacyl-tRNA synthetase; HET: TYM; 3.00A {Pyrococcus horikoshii} Back     alignment and structure
>2zp1_A Tyrosyl-tRNA synthetase; tRNA synthetases class I, ligase, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, nucleotide-binding; HET: IYR; 1.70A {Methanocaldococcus jannaschii} PDB: 1zh6_A* 1j1u_A* 1u7d_A 2q1g_A* 2pxh_A* 1zh0_A* 2q1i_A* 2ag6_A* 3qe4_A* 3d6u_A* 3d6v_A* 1u7x_A 3n2y_A* 2hgz_A* Back     alignment and structure
>1n3l_A Tyrosyl-tRNA synthetase; rossmann fold AS catalytic domain, unique anticodon recognit domain, dimer, ligase; 1.18A {Homo sapiens} SCOP: c.26.1.1 PDB: 1q11_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 794
d1ffya3450 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthe 5e-50
d1ffya3450 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthe 5e-04
d1h3na3494 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetas 9e-47
d1ilea3452 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthe 5e-44
d1ilea3452 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthe 8e-04
d1ivsa4425 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase 2e-41
d1pfva2350 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthe 1e-29
d1ffya2194 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (Il 2e-28
d1ffya1273 a.27.1.1 (A:645-917) Isoleucyl-tRNA synthetase (Il 6e-27
d1rqga2361 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthe 8e-21
d2d5ba2348 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetR 9e-21
d1udza_179 b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {T 5e-20
d1h3na2192 b.51.1.1 (A:226-417) Leucyl-tRNA synthetase (LeuRS 7e-12
d1irxa2317 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase { 9e-08
d1wkaa1143 b.51.1.1 (A:195-337) Valyl-tRNA synthetase (ValRS) 4e-07
d1ivsa2218 a.27.1.1 (A:579-796) Valyl-tRNA synthetase (ValRS) 7e-06
d1h3na1128 a.27.1.1 (A:687-814) Leucyl-tRNA synthetase (LeuRS 2e-05
d1li5a2315 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysR 3e-04
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 450 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Isoleucyl-tRNA synthetase (IleRS)
species: Staphylococcus aureus [TaxId: 1280]

 Score =  180 bits (456), Expect = 5e-50
 Identities = 107/204 (52%), Positives = 143/204 (70%), Gaps = 3/204 (1%)

Query: 106 YKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADKNDG-ENFVLHDGPPYANGN 164
           Y+ T+ +PKT F MR     +EP+I + WD    + +  +KN G E F+LHDGPPYANGN
Sbjct: 3   YEKTLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN 62

Query: 165 LHMGHALNKILKDIINRYKLLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKL 224
           LHMGHALNKILKD I RYK +Q +   YVPGWD HGLPIE  + +   +  +K ++ ++ 
Sbjct: 63  LHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLPIEQALTKKGVD--RKKMSTAEF 120

Query: 225 RAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEYEAAQIEVFGQMSLQGYIYRGK 284
           R K  +FA   ++ Q   F+R GV  D+N+PY+TL PEYEAAQI +FG+M+ +G IY+GK
Sbjct: 121 REKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGK 180

Query: 285 KPVHWSPSSRTALAEAELEYPEGH 308
           KPV+WSPSS ++LAEAE+EYP   
Sbjct: 181 KPVYWSPSSESSLAEAEIEYPHDW 204
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 450 Back     information, alignment and structure
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 494 Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 452 Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 452 Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 425 Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Length = 350 Back     information, alignment and structure
>d1ffya2 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 194 Back     information, alignment and structure
>d1ffya1 a.27.1.1 (A:645-917) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 273 Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Length = 361 Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Length = 348 Back     information, alignment and structure
>d1udza_ b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 179 Back     information, alignment and structure
>d1h3na2 b.51.1.1 (A:226-417) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 192 Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 317 Back     information, alignment and structure
>d1wkaa1 b.51.1.1 (A:195-337) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 143 Back     information, alignment and structure
>d1ivsa2 a.27.1.1 (A:579-796) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 218 Back     information, alignment and structure
>d1h3na1 a.27.1.1 (A:687-814) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 128 Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Length = 315 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query794
d1ffya3450 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 100.0
d1h3na3494 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 100.0
d1ilea3452 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 100.0
d1ivsa4425 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 100.0
d1udza_179 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 100.0
d1ffya2194 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 100.0
d1wkaa1143 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 100.0
d1ffya1273 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 99.98
d1pfva2350 Methionyl-tRNA synthetase (MetRS) {Escherichia col 99.97
d1h3na2192 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 99.97
d1ilea1180 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 99.97
d2d5ba2348 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 99.96
d1rqga2361 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 99.96
d1ivsa2218 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 99.94
d1li5a2315 Cysteinyl-tRNA synthetase (CysRS) {Escherichia col 99.86
d1h3na1128 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 99.79
d1rqga1210 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 99.55
d2d5ba1152 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 99.24
d1pfva1162 Methionyl-tRNA synthetase (MetRS) {Escherichia col 99.21
d1irxa2317 Class I lysyl-tRNA synthetase {Archaeon Pyrococcus 99.17
d1f7ua2348 Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa 98.99
d1iq0a2370 Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi 98.7
d1j09a2305 Glutamyl-tRNA synthetase (GluRS) {Thermus thermoph 98.24
d1nzja_286 Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia c 97.98
d1gtra2331 Glutaminyl-tRNA synthetase (GlnRS) {Escherichia co 97.88
d1ilea3452 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 92.27
d1j1ua_306 Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanoc 83.55
d1irxa2317 Class I lysyl-tRNA synthetase {Archaeon Pyrococcus 80.22
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Isoleucyl-tRNA synthetase (IleRS)
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=3.3e-57  Score=512.97  Aligned_cols=198  Identities=53%  Similarity=0.963  Sum_probs=188.3

Q ss_pred             cccccccCCCccCCCCCCcccccHHHHHHHhhcCcchhcccc-CCCCcEEEEcCCCCCCCcccchHHHhHHHHHHHHHHH
Q 003799          105 RYKHTVDLPKTTFGMRANALVREPEIHKLWDDHQVFLRVADK-NDGENFVLHDGPPYANGNLHMGHALNKILKDIINRYK  183 (794)
Q Consensus       105 ~~~~t~~lp~t~f~~r~n~~~~E~~~~~~W~~~~~~~~~~~~-~~~~~f~i~~~pPy~nG~lHiGHa~~~il~Dii~R~~  183 (794)
                      +|++||+||+|.||||+|+..+|++||++|+++++|++..+. .++++|+|++|||||||.||||||+|++++||++||+
T Consensus         2 ~~~~tl~lp~t~f~~~~~~~~~E~~~~~~W~~~~~~~~~~~~~~~~~~f~~~~~pPy~nG~lHiGH~~~~~~~Dv~~Ry~   81 (450)
T d1ffya3           2 DYEKTLLMPKTDFPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGNLHMGHALNKILKDFIVRYK   81 (450)
T ss_dssp             CSGGGSCCCCCCCCSSCCHHHHHHHHHHHHHHTTHHHHHHHHTTTSCBCCEECCCCBSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred             CcccccCCCCCCCCCCCChHHHHHHHHHHHHHCCCccccccccCCCCcEEEecCCCCCCCchhhhHHHHHHHHHHHHHHH
Confidence            699999999999999999999999999999999999986543 4678999999999999999999999999999999999


Q ss_pred             HhCCCeeEEeccccCCCchHHHHHHhhchhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCCccccCChHH
Q 003799          184 LLQNYKVRYVPGWDCHGLPIELKVLQSLDEDAKKDLTPSKLRAKAAKFAKATVKAQMASFKRYGVWADWNNPYLTLDPEY  263 (794)
Q Consensus       184 r~~G~~V~~~~G~D~hGlpie~~~~k~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~lGi~~dwd~~~~T~d~~~  263 (794)
                      ||+||+|+|++||||||+|||.++++....  ..+++.+++++.|++++.++++.++++|++||++.||+++|.|++|.|
T Consensus        82 rm~G~~V~~~~G~D~~G~pie~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~D~~~~~~T~~~~~  159 (450)
T d1ffya3          82 TMQGFYAPYVPGWDTHGLPIEQALTKKGVD--RKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEY  159 (450)
T ss_dssp             HTTTCBCCCCCEEBCCSHHHHHHHHHHTCC--STTTCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSCTTSCEETTSHHH
T ss_pred             HhcCCccccccccccCCcHHHHHHHhhCCc--cccccHHHHhhhcchhhhhhhhhHHHHHHHHhhhcccccccccccHHH
Confidence            999999999999999999999998876542  457889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHcCCeeecccCceeccCCCcccccccccc
Q 003799          264 EAAQIEVFGQMSLQGYIYRGKKPVHWSPSSRTALAEAELEY  304 (794)
Q Consensus       264 ~~~v~~~f~~L~~kGlIy~~~~~v~w~~~~~t~Lae~Evey  304 (794)
                      ++.++++|.+|+++|+||++.++|+|||.|+|+|+++|+++
T Consensus       160 ~~~v~~~f~~l~~~G~iy~~~~~v~~~p~~~~~~~~~e~~~  200 (450)
T d1ffya3         160 EAAQIRIFGEMADKGLIYKGKKPVYWSPSSESSLAEAEIEY  200 (450)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEEEEEEEETTTTEECCGGGEEE
T ss_pred             HHHHHHHHHHHHHcCCeeccccccccccccCcccccccccc
Confidence            99999999999999999999999999999999999999996
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1udza_ b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ffya2 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1wkaa1 b.51.1.1 (A:195-337) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ffya1 a.27.1.1 (A:645-917) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1h3na2 b.51.1.1 (A:226-417) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ilea1 a.27.1.1 (A:642-821) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1ivsa2 a.27.1.1 (A:579-796) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1h3na1 a.27.1.1 (A:687-814) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rqga1 a.27.1.1 (A:397-606) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2d5ba1 a.27.1.1 (A:349-500) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1pfva1 a.27.1.1 (A:389-550) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1j1ua_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure