Citrus Sinensis ID: 004970

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-

MASSSSFTLSQALLTRGTSHHGFTQSSEHHRLALSTLSLPSFSGLKSTSSSTLRTPTSRRRLSTSQASLPIRAAAVETLETSTDAALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKKYPEEAAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC

cccccccHHHHHHHHcccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccccccccccccEEcccccHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEcccHHHHHHHHHHHHHHHHcccccEEEEEccccccccccccccccccHHHHHHHcccEEEEccccccHHHHHHHHHHHHHHccccccEEEEEccccccccccccccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccHHHHccHHHHHHHHHcccccEEEEcccccccccccccccHHHHHHHHccccccccccccccHHHHHHHHHHHHccccccEEEEccccccccccccHHHcccccEEEEcccccccccEEEEEcccHHHHHHHHHHHHHHccccEEEEccccHHHHHHHcHHHHHcccccccccEEEEEccccccccccccccccEEEEccccccccHHHHHHHccccHHHHHHHHHHHc

cccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccccccccEEEEccHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHcEccEccccccEEEEEcHHHHHcHHHHHHHHHHHHHccccEEEEEEEccEEccEEHHHcccccHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHcccccEEEEEEcccccccccccccHHHccccccHHHHHHHHHHHccccccccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccHHHHccccccccccEcHHHHHHHHHHHHHHHcccEEEEEcccHHHHccccccccEcccccccccEccccccHHHHHHHHHHHHHHccccEEEEEEEHHHHHHHHHHHHHHHHHccccEEEEEcccHHHcccccccccccHHHHHHcccccEEEccccHHHHHHHHHHHHHcccccEEEEEccccEcccccccHHHHHcccEEEEEccccccccEEEEEcHHHHHHHHHHHHHHHHccccEEEEEcccHHHHHHccHHHHHHHcccccccEEEEccccccccHHHHccccEEEccccccccccHHHHHHHccccHHHHHHHHcccc

MASSSSFTLSQALLTrgtshhgftqssehhrlalstlslpsfsglkstssstlrtptsrrrlstsqASLPIRAAAVETLETSTDAALVEKSVNTIRFLAVDAVekansghpglpmgcapmghilydevmrynpknpywfnrdRFVLSAGHGCMLQYALLHLAgydsvqvttgplgqGMANAVGLALAEKHLAArynkpdneivdhYTYVIlgdgcqmegIANEASSLAGHLGLGKLIafyddnhisidgdteiafTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAkavtdkptlirvtttigfgspnkansysvhgsalgakevdatrknlgwpyepfhvpedvkkHWSRHVAEGATLEAEWNAKFAEYEKKypeeaaefksissgqlpagwekalptytpespaeaTRNLSQTCLNALAKTlpgllggsadlaSSNMTLLKMFGdfqkdtpeernvrfgvrehgmgAICNgialhspglipycatfFVFTDYMRAAIRISALCEAGVIYVMthdsiglgedgpthqpiehlasframpnilmlrpadgnetaGAYKVAVANRKRPSILALSRqklphlagtsidgvekgayiisdnssgnkpdvilIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIeagstfgwekivgskgkaigidrfgasapagkiykeFGITAEAVITAAKEVC

MASSSSFTLSQALLTRGTSHHGFTQSSEHHRLALSTLSlpsfsglkstssstlrtptsrrrlstsqaslPIRAAAVETLETstdaalveksVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKeakavtdkptliRVTTtigfgspnkaNSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKKYPEEAAEfksissgqlpagWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFgdfqkdtpeERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSilalsrqklphlagtsidgveKGAYIisdnssgnkpDVILIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVsieagstfgwekivgSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC

MASSSSFTLSQALLTRGTSHHGFTQSSEHHRLALSTLslpsfsglkstssstlrtptsrrrlstsQASLPIRAAAVETLETSTDAALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNakfaeyekkypeeaaefkSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGSeleiaakaaeelRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC

******************************************************************************L**STDAALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYE******************************************QTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQ******RNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISD******PDVILIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITA*****

*****************************************************************************************KSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKKYPEEAAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC

*********SQALLTRG*************RLALSTLSLPSF************************ASLPIRAAAVETLETSTDAALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKKYPEEAAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC

***********************************************************************************DAALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVQVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKKYPEEAAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		721	2.2.26 [Sep-21-2011]
F4IW47		741	Transketolase-2, chloropl	yes	no	0.984	0.958	0.793	0.0
Q8RWV0		741	Transketolase-1, chloropl	no	no	0.981	0.955	0.787	0.0
Q43848		741	Transketolase, chloroplas	N/A	no	0.981	0.955	0.793	0.0
O20250		741	Transketolase, chloroplas	N/A	no	0.945	0.920	0.801	0.0
Q7SIC9		675	Transketolase, chloroplas	N/A	no	0.893	0.954	0.831	0.0
Q42677		676	Transketolase 7 OS=Crater	N/A	no	0.880	0.939	0.742	0.0
Q42675		679	Transketolase 10 OS=Crate	N/A	no	0.880	0.935	0.746	0.0
Q42676		519	Transketolase, chloroplas	N/A	no	0.718	0.998	0.872	0.0
Q8YRU9		670	Transketolase OS=Nostoc s	yes	no	0.877	0.944	0.625	0.0
Q9KAD7		666	Transketolase OS=Bacillus	yes	no	0.862	0.933	0.522	0.0

>sp\|F4IW47\|TKTC2_ARATH Transketolase-2, chloroplastic OS=Arabidopsis thaliana GN=TKL-2 PE=1 SV=1	Back alignment and function desciption

 Score = 1217 bits (3150), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 595/750 (79%), Positives = 647/750 (86%), Gaps = 40/750 (5%)

Query: 1   MASSSSFTLSQALLTRGTSHHGFTQSSEHHRLALSTLSLPSFSGLKSTSSSTLRTPTSRR 60
           MAS+SS  LSQALLTR  SH+G    SE+       +S+P+FS LKSTS  T  T +SRR
Sbjct: 1   MASTSSLALSQALLTRAISHNG----SEN------CVSIPAFSALKSTSPRTSGTISSRR 50

Query: 61  R-LSTSQASLP--IRAAAVETLETSTDAALVEKSVNTIRFLAVDAVEKANSGHPGLPMGC 117
           R  ST   SL   +RAAAVE + TS+D++LV+KSVNTIRFLA+DAVEKA SGHPGLPMGC
Sbjct: 51  RNASTISHSLRPLVRAAAVEAIVTSSDSSLVDKSVNTIRFLAIDAVEKAKSGHPGLPMGC 110

Query: 118 APMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSV---------- 167
           APM HILYDEVM+YNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSV          
Sbjct: 111 APMSHILYDEVMKYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVREEDLKSFRQ 170

Query: 168 -----------------QVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVI 210
                            + TTGPLGQG+ANAVGLALAEKHLAAR+NKPDNEIVDHYTY I
Sbjct: 171 WGSKTPGHPENFETPGVEATTGPLGQGIANAVGLALAEKHLAARFNKPDNEIVDHYTYSI 230

Query: 211 LGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHV 270
           LGDGCQMEGI+NE  SLAGH GLGKLIAFYDDNHISIDGDT+IAFTE+VDKRFE LGWHV
Sbjct: 231 LGDGCQMEGISNEVCSLAGHWGLGKLIAFYDDNHISIDGDTDIAFTESVDKRFEALGWHV 290

Query: 271 IWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVD 330
           IWVKNGN GYD+IRAAI+EAKAVTDKPTLI+VTTTIG+GSPNKANSYSVHG+ALG KEV+
Sbjct: 291 IWVKNGNNGYDEIRAAIREAKAVTDKPTLIKVTTTIGYGSPNKANSYSVHGAALGEKEVE 350

Query: 331 ATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKKYPEEAAEFKSISS 390
           ATR NLGWPYEPFHVPEDVK HWSRH  EGA LEA+WNAKFA YEKKYPEEAAE KSI S
Sbjct: 351 ATRNNLGWPYEPFHVPEDVKSHWSRHTPEGAALEADWNAKFAAYEKKYPEEAAELKSIIS 410

Query: 391 GQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFG 450
           G+LP GWEKALPTYTP+SP +ATRNLSQ CLNALAK +PG LGGSADLASSNMT+LK FG
Sbjct: 411 GELPVGWEKALPTYTPDSPGDATRNLSQQCLNALAKAVPGFLGGSADLASSNMTMLKAFG 470

Query: 451 DFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCE 510
           +FQK TPEERN+RFGVREHGMGAICNGIALHSPG IPYCATFFVFTDYMRAA+RISAL E
Sbjct: 471 NFQKATPEERNLRFGVREHGMGAICNGIALHSPGFIPYCATFFVFTDYMRAAMRISALSE 530

Query: 511 AGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKR 570
           AGVIYVMTHDSIGLGEDGPTHQPIEHL+SFRAMPNI+M RPADGNETAGAYK+AV  RK 
Sbjct: 531 AGVIYVMTHDSIGLGEDGPTHQPIEHLSSFRAMPNIMMFRPADGNETAGAYKIAVTKRKT 590

Query: 571 PSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGSELEIAAKAAEELR 630
           PS+LALSRQKLP L GTSI+ VEKG Y ISDNS+GNKPDVILIGTGSELEIAA+AAE+LR
Sbjct: 591 PSVLALSRQKLPQLPGTSIESVEKGGYTISDNSTGNKPDVILIGTGSELEIAAQAAEKLR 650

Query: 631 KGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGI 690
           + GK+VRVVSFV WELFDEQSDAYKESVLP+ VSARVSIEAGSTFGW KIVG KGK+IGI
Sbjct: 651 EQGKSVRVVSFVCWELFDEQSDAYKESVLPSDVSARVSIEAGSTFGWGKIVGGKGKSIGI 710

Query: 691 DRFGASAPAGKIYKEFGITAEAVITAAKEV 720
           D FGASAPAGK+YKEFGIT EA++ AAK +
Sbjct: 711 DTFGASAPAGKLYKEFGITIEAMVEAAKSL 740

Catalyzes the reversible transfer of a two-carbon ketol group from fructose-6-phosphate or sedoheptulose-7-phosphate to glyceraldehyde-3-phosphate to yield xylulose-5-phosphate and erythrose-4-phosphate or ribose-5-phosphate, respectively (By similarity). Could act as a stress sensor involved in adaptation process.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 2EC: .EC: 1EC: .EC: 1

>sp\|Q8RWV0\|TKTC1_ARATH Transketolase-1, chloroplastic OS=Arabidopsis thaliana GN=TKL-1 PE=1 SV=1	Back alignment and function description

>sp\|Q43848\|TKTC_SOLTU Transketolase, chloroplastic OS=Solanum tuberosum PE=2 SV=1	Back alignment and function description

>sp\|O20250\|TKTC_SPIOL Transketolase, chloroplastic OS=Spinacia oleracea PE=1 SV=1	Back alignment and function description

>sp\|Q7SIC9\|TKTC_MAIZE Transketolase, chloroplastic OS=Zea mays PE=1 SV=1	Back alignment and function description

>sp\|Q42677\|TKT7_CRAPL Transketolase 7 OS=Craterostigma plantagineum GN=TKT7 PE=2 SV=1	Back alignment and function description

>sp\|Q42675\|TKTA_CRAPL Transketolase 10 OS=Craterostigma plantagineum GN=TKT10 PE=2 SV=1	Back alignment and function description

>sp\|Q42676\|TKTC_CRAPL Transketolase, chloroplastic (Fragment) OS=Craterostigma plantagineum GN=TKT3 PE=1 SV=1	Back alignment and function description

>sp\|Q8YRU9\|TKT_NOSS1 Transketolase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=tkt PE=1 SV=1	Back alignment and function description

>sp\|Q9KAD7\|TKT_BACHD Transketolase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=tkt PE=3 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		721
255541252		752	transketolase, putative [Ricinus communi	0.988	0.948	0.840	0.0
449498919		745	PREDICTED: transketolase, chloroplastic-	0.994	0.962	0.835	0.0
449454520		745	PREDICTED: transketolase, chloroplastic-	0.994	0.962	0.834	0.0
118487947		744	unknown [Populus trichocarpa]	0.993	0.962	0.842	0.0
224063766		744	predicted protein [Populus trichocarpa]	0.993	0.962	0.840	0.0
118481093		744	unknown [Populus trichocarpa]	0.993	0.962	0.836	0.0
356576867		740	PREDICTED: transketolase, chloroplastic-	0.987	0.962	0.829	0.0
449432267		742	PREDICTED: transketolase, chloroplastic-	0.990	0.962	0.815	0.0
356536526		742	PREDICTED: transketolase, chloroplastic-	0.990	0.962	0.829	0.0
356506190		731	PREDICTED: transketolase, chloroplastic-	0.920	0.908	0.856	0.0

>gi\|255541252\|ref\|XP_002511690.1\| transketolase, putative [Ricinus communis] gi\|223548870\|gb\|EEF50359.1\| transketolase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1297 bits (3357), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 639/760 (84%), Positives = 672/760 (88%), Gaps = 47/760 (6%)

Query: 1   MASSSSFTLSQALLTRGTSHHGFTQSSEHHRLALSTLSLPSFSGLKSTSSS--------- 51
           MAS+SS TLSQALL R  SHH  TQSS+  RL+LST SLP+FSGLKSTSSS         
Sbjct: 1   MASTSSLTLSQALLARAISHHVSTQSSD--RLSLSTPSLPAFSGLKSTSSSIPRATSSRR 58

Query: 52  ---TLRTPTSRRRLSTSQASLPIRAAAVETLETSTDAALVEKSVNTIRFLAVDAVEKANS 108
                  PT+RR L T     P RAAAVETL+ +TD +LVEKSVNTIRFLA+DAVEKANS
Sbjct: 59  SRRNSSIPTARR-LQT-----PTRAAAVETLDVTTDTSLVEKSVNTIRFLAIDAVEKANS 112

Query: 109 GHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSV- 167
           GHPGLPMGCAPMGHILYDE+M+YNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSV 
Sbjct: 113 GHPGLPMGCAPMGHILYDEIMKYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGYDSVK 172

Query: 168 --------------------------QVTTGPLGQGMANAVGLALAEKHLAARYNKPDNE 201
                                     +VTTGPLGQG+ANAVGLALAEKHLAAR+NKPDNE
Sbjct: 173 EEDLKSFRQWGSKTPGHPENFETPGVEVTTGPLGQGIANAVGLALAEKHLAARFNKPDNE 232

Query: 202 IVDHYTYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDK 261
           IVDHYTY ILGDGCQMEGIANEA SLAGH GLGKLIAFYDDNHISIDGDTEIAFTE+VDK
Sbjct: 233 IVDHYTYAILGDGCQMEGIANEACSLAGHWGLGKLIAFYDDNHISIDGDTEIAFTESVDK 292

Query: 262 RFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHG 321
           RFE LGWHVIWVKNGNTGYD+IRAAIKEAKAVTDKPT+I+VTTTIG+GSPNKANSYSVHG
Sbjct: 293 RFEALGWHVIWVKNGNTGYDEIRAAIKEAKAVTDKPTMIKVTTTIGYGSPNKANSYSVHG 352

Query: 322 SALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKKYPEE 381
           SALGAKEVDATRKNLGWP+EPFHVPEDVK HWSRH+  GA  EAEWNAKFAEYEKKY EE
Sbjct: 353 SALGAKEVDATRKNLGWPFEPFHVPEDVKNHWSRHIPGGAAFEAEWNAKFAEYEKKYKEE 412

Query: 382 AAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASS 441
           AAE KSI  G+LPAGWEKALPTYTPESPA+ATRNLSQ  LNALAK LPGLLGGSADLASS
Sbjct: 413 AAELKSIIKGELPAGWEKALPTYTPESPADATRNLSQANLNALAKVLPGLLGGSADLASS 472

Query: 442 NMTLLKMFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRA 501
           NMTLLKMFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRA
Sbjct: 473 NMTLLKMFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRA 532

Query: 502 AIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMLRPADGNETAGAY 561
           A+RISAL EAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILM RPADGNETAGAY
Sbjct: 533 AMRISALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNILMFRPADGNETAGAY 592

Query: 562 KVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGSELEI 621
           ++AV NRKRPS+LALSRQKLP L GTSI+GVEKG Y ISDNSSGNKPDVILIGTGSELEI
Sbjct: 593 RIAVLNRKRPSVLALSRQKLPQLPGTSIEGVEKGGYTISDNSSGNKPDVILIGTGSELEI 652

Query: 622 AAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIV 681
           AAKAAEELR+ GKAVRVVSFVSWELFDEQSDAYKESVLPAAV+ARVSIEAGSTFGW+KIV
Sbjct: 653 AAKAAEELRREGKAVRVVSFVSWELFDEQSDAYKESVLPAAVTARVSIEAGSTFGWQKIV 712

Query: 682 GSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC 721
           G KGKAIGIDRFGASAPAGKIYKE+GITAEAVI AAKE+C
Sbjct: 713 GGKGKAIGIDRFGASAPAGKIYKEYGITAEAVIAAAKELC 752

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|449498919\|ref\|XP_004160671.1\| PREDICTED: transketolase, chloroplastic-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|449454520\|ref\|XP_004145002.1\| PREDICTED: transketolase, chloroplastic-like [Cucumis sativus] gi\|449474170\|ref\|XP_004154093.1\| PREDICTED: transketolase, chloroplastic-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|118487947\|gb\|ABK95795.1\| unknown [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|224063766\|ref\|XP_002301278.1\| predicted protein [Populus trichocarpa] gi\|222843004\|gb\|EEE80551.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|118481093\|gb\|ABK92500.1\| unknown [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|356576867\|ref\|XP_003556551.1\| PREDICTED: transketolase, chloroplastic-like [Glycine max]	Back alignment and taxonomy information

>gi\|449432267\|ref\|XP_004133921.1\| PREDICTED: transketolase, chloroplastic-like [Cucumis sativus] gi\|449480047\|ref\|XP_004155784.1\| PREDICTED: transketolase, chloroplastic-like [Cucumis sativus] gi\|351735634\|gb\|AEQ59483.1\| chloroplast transketolase [Cucumis sativus]	Back alignment and taxonomy information

>gi\|356536526\|ref\|XP_003536788.1\| PREDICTED: transketolase, chloroplastic-like [Glycine max]	Back alignment and taxonomy information

>gi\|356506190\|ref\|XP_003521870.1\| PREDICTED: transketolase, chloroplastic-like [Glycine max]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		721
UNIPROTKB\|Q43848		741	Q43848 "Transketolase, chlorop	0.768	0.747	0.824	3.8e-300
TAIR\|locus:2050837		741	AT2G45290 [Arabidopsis thalian	0.768	0.747	0.808	1.3e-297
TAIR\|locus:2101871		741	AT3G60750 [Arabidopsis thalian	0.765	0.744	0.813	3.5e-297
UNIPROTKB\|O20250		741	O20250 "Transketolase, chlorop	0.769	0.748	0.807	9.7e-293
TIGR_CMR\|BA_3744		666	BA_3744 "transketolase" [Bacil	0.768	0.831	0.492	1.2e-166
UNIPROTKB\|G4MRY4		687	MGG_02471 "Transketolase" [Mag	0.761	0.799	0.471	2e-160
TIGR_CMR\|DET_0644		666	DET_0644 "transketolase" [Deha	0.746	0.807	0.491	3.3e-160
TIGR_CMR\|DET_0678		666	DET_0678 "transketolase" [Deha	0.746	0.807	0.491	3.3e-160
ASPGD\|ASPL0000053784		684	AN0688 [Emericella nidulans (t	0.753	0.793	0.477	4.2e-160
UNIPROTKB\|Q9KLW7		664	tkt2 "Transketolase 2" [Vibrio	0.766	0.832	0.486	3.9e-155

UNIPROTKB\|Q43848 Q43848 "Transketolase, chloroplastic" [Solanum tuberosum (taxid:4113)]	Back alignment and assigned GO terms

 Score = 2385 (844.6 bits), Expect = 3.8e-300, Sum P(2) = 3.8e-300
 Identities = 457/554 (82%), Positives = 483/554 (87%)

Query:   167 VQVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQMEGIANEASS 226
             V+VTTGPLGQG+ANAVGLA+AEKHLAAR+NKPD EIVDHYTYVILGDGCQMEGI+NE  S
Sbjct:   187 VEVTTGPLGQGIANAVGLAVAEKHLAARFNKPDAEIVDHYTYVILGDGCQMEGISNEVCS 246

Query:   227 LAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAA 286
             LAGH GLGKLIAFYDDNHISIDGDTEIAFTE+V  RFE LGWHVIWVKNGNTGYD+IRAA
Sbjct:   247 LAGHWGLGKLIAFYDDNHISIDGDTEIAFTEDVSARFESLGWHVIWVKNGNTGYDEIRAA 306

Query:   287 IKEAKAVTDKPTLIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVP 346
             IKEAKAV DKPT+I+VTTTIGFGSPNKANSYSVHGS LGAKEV+ATR NLGWPYEPFHVP
Sbjct:   307 IKEAKAVKDKPTMIKVTTTIGFGSPNKANSYSVHGSGLGAKEVEATRNNLGWPYEPFHVP 366

Query:   347 EDVKKHWSRHVAEGATLEAEWNXXXXXXXXXXXXXXXXXXSISSGQLPAGWEKALPTYTP 406
             EDVK HWSRH  EGA LE EWN                  SI +G+LPAGWEKALPTYTP
Sbjct:   367 EDVKSHWSRHTPEGAALETEWNAKFAEYEKKYAEEAADLKSIITGELPAGWEKALPTYTP 426

Query:   407 ESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQKDTPEERNVRFGV 466
             ESPA+ATRNLSQ  LNALAK LPG LGGSADLASSNMTLLKMFGDFQK+TPEERN+RFGV
Sbjct:   427 ESPADATRNLSQQNLNALAKVLPGFLGGSADLASSNMTLLKMFGDFQKNTPEERNLRFGV 486

Query:   467 REHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGE 526
             REHGMGAICNGIALHS GLIPYCATFFVFTDYMR A+RISAL EAGVIYVMTHDSIGLGE
Sbjct:   487 REHGMGAICNGIALHSLGLIPYCATFFVFTDYMRGAMRISALSEAGVIYVMTHDSIGLGE 546

Query:   527 DGPTHQPIEHLASFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAG 586
             DGPTHQPIEHLASFRAMPNILM RPADGNETAGAYKVAV  RK PSILALSRQKLP LAG
Sbjct:   547 DGPTHQPIEHLASFRAMPNILMFRPADGNETAGAYKVAVLKRKTPSILALSRQKLPQLAG 606

Query:   587 TSIDGVEKGAYIISDNSSGNKPDVILIGTGSXXXXXXXXXXXXRKGGKAVRVVSFVSWEL 646
             TSI+G  KG YI+SDNSSGNKPDVILIGTGS            +K GK VRVVSFV WEL
Sbjct:   607 TSIEGAAKGGYIVSDNSSGNKPDVILIGTGSELEIAVKAAEELKKEGKTVRVVSFVCWEL 666

Query:   647 FDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEF 706
             +DEQS  YKESVLP++V+ARVSIEAGSTFGW+K VG KGKAIGID FGASAPA KIYKEF
Sbjct:   667 YDEQSAEYKESVLPSSVTARVSIEAGSTFGWQKFVGDKGKAIGIDGFGASAPADKIYKEF 726

Query:   707 GITAEAVITAAKEV 720
             GITAEAV+ AAK+V
Sbjct:   727 GITAEAVVAAAKQV 740

GO:0004802 "transketolase activity" evidence=ISS

GO:0009535 "chloroplast thylakoid membrane" evidence=ISS

TAIR\|locus:2050837 AT2G45290 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2101871 AT3G60750 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

UNIPROTKB\|O20250 O20250 "Transketolase, chloroplastic" [Spinacia oleracea (taxid:3562)]	Back alignment and assigned GO terms

TIGR_CMR\|BA_3744 BA_3744 "transketolase" [Bacillus anthracis str. Ames (taxid:198094)]	Back alignment and assigned GO terms

UNIPROTKB\|G4MRY4 MGG_02471 "Transketolase" [Magnaporthe oryzae 70-15 (taxid:242507)]	Back alignment and assigned GO terms

TIGR_CMR\|DET_0644 DET_0644 "transketolase" [Dehalococcoides ethenogenes 195 (taxid:243164)]	Back alignment and assigned GO terms

TIGR_CMR\|DET_0678 DET_0678 "transketolase" [Dehalococcoides ethenogenes 195 (taxid:243164)]	Back alignment and assigned GO terms

ASPGD\|ASPL0000053784 AN0688 [Emericella nidulans (taxid:162425)]	Back alignment and assigned GO terms

UNIPROTKB\|Q9KLW7 tkt2 "Transketolase 2" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7MDD4	TKT2_VIBVY	2, ., 2, ., 1, ., 1	0.5015	0.8626	0.9381	yes	no
Q7SIC9	TKTC_MAIZE	2, ., 2, ., 1, ., 1	0.8318	0.8932	0.9540	N/A	no
Q42675	TKTA_CRAPL	2, ., 2, ., 1, ., 1	0.7466	0.8807	0.9351	N/A	no
Q42676	TKTC_CRAPL	2, ., 2, ., 1, ., 1	0.8725	0.7184	0.9980	N/A	no
Q42677	TKT7_CRAPL	2, ., 2, ., 1, ., 1	0.7424	0.8807	0.9393	N/A	no
Q7MHK7	TKT1_VIBVY	2, ., 2, ., 1, ., 1	0.4924	0.8626	0.9367	yes	no
Q12630	TKT1_KLULA	2, ., 2, ., 1, ., 1	0.4901	0.8613	0.9145	yes	no
P99161	TKT_STAAN	2, ., 2, ., 1, ., 1	0.4732	0.8585	0.9350	yes	no
Q87LK8	TKT1_VIBPA	2, ., 2, ., 1, ., 1	0.4954	0.8626	0.9367	yes	no
F4IW47	TKTC2_ARATH	2, ., 2, ., 1, ., 1	0.7933	0.9847	0.9581	yes	no
P57195	TKT_BUCAI	2, ., 2, ., 1, ., 1	0.4490	0.8585	0.9308	yes	no
P34736	TKT_PICST	2, ., 2, ., 1, ., 1	0.4954	0.8654	0.9217	yes	no
P66963	TKT_STAAW	2, ., 2, ., 1, ., 1	0.4732	0.8585	0.9350	yes	no
P66962	TKT_STAAM	2, ., 2, ., 1, ., 1	0.4732	0.8585	0.9350	yes	no
Q87GY4	TKT2_VIBPA	2, ., 2, ., 1, ., 1	0.5	0.8626	0.9381	yes	no
P57927	TKT1_PASMU	2, ., 2, ., 1, ., 1	0.4864	0.8668	0.9356	yes	no
Q5HG77	TKT_STAAC	2, ., 2, ., 1, ., 1	0.4732	0.8585	0.9350	yes	no
Q8D6H8	TKT2_VIBVU	2, ., 2, ., 1, ., 1	0.4969	0.8626	0.9381	yes	no
P22976	TKT_STRPN	2, ., 2, ., 1, ., 1	0.4931	0.8654	0.9483	yes	no
Q5E7R1	TKT1_VIBF1	2, ., 2, ., 1, ., 1	0.4909	0.8626	0.9367	yes	no
P21726	TKTP_CUPNH	2, ., 2, ., 1, ., 1	0.5045	0.8599	0.9253	yes	no
Q6G9L6	TKT_STAAS	2, ., 2, ., 1, ., 1	0.4732	0.8585	0.9350	yes	no
P21725	TKTC_CUPNH	2, ., 2, ., 1, ., 1	0.5037	0.8613	0.9268	yes	no
Q43848	TKTC_SOLTU	2, ., 2, ., 1, ., 1	0.7938	0.9819	0.9554	N/A	no
Q8RWV0	TKTC1_ARATH	2, ., 2, ., 1, ., 1	0.7874	0.9819	0.9554	no	no
Q9KAD7	TKT_BACHD	2, ., 2, ., 1, ., 1	0.5227	0.8626	0.9339	yes	no
Q8KA26	TKT_BUCAP	2, ., 2, ., 1, ., 1	0.4537	0.8585	0.9308	yes	no
Q9URM2	TKT_SCHPO	2, ., 2, ., 1, ., 1	0.4494	0.8599	0.9051	yes	no
O20250	TKTC_SPIOL	2, ., 2, ., 1, ., 1	0.8011	0.9459	0.9203	N/A	no
Q8YRU9	TKT_NOSS1	2, ., 2, ., 1, ., 1	0.625	0.8779	0.9447	yes	no
Q5HPJ9	TKT_STAEQ	2, ., 2, ., 1, ., 1	0.4742	0.8654	0.9425	yes	no
P45694	TKT_BACSU	2, ., 2, ., 1, ., 1	0.5060	0.8723	0.9430	yes	no
Q8CPC7	TKT_STAES	2, ., 2, ., 1, ., 1	0.4742	0.8654	0.9425	yes	no
Q9KLW7	TKT2_VIBCH	2, ., 2, ., 1, ., 1	0.5060	0.8640	0.9382	yes	no
O67642	TKT_AQUAE	2, ., 2, ., 1, ., 1	0.4629	0.8640	0.9042	yes	no
Q6GH64	TKT_STAAR	2, ., 2, ., 1, ., 1	0.4717	0.8585	0.9350	yes	no
P23254	TKT1_YEAST	2, ., 2, ., 1, ., 1	0.4947	0.8626	0.9147	yes	no
P57958	TKT2_PASMU	2, ., 2, ., 1, ., 1	0.4894	0.8668	0.9356	yes	no
P43757	TKT_HAEIN	2, ., 2, ., 1, ., 1	0.5068	0.8640	0.9368	yes	no
Q89AY2	TKT_BUCBP	2, ., 2, ., 1, ., 1	0.4603	0.8696	0.9414	yes	no
Q8DCA2	TKT1_VIBVU	2, ., 2, ., 1, ., 1	0.4909	0.8626	0.9367	yes	no
Q9KUP2	TKT1_VIBCH	2, ., 2, ., 1, ., 1	0.5060	0.8640	0.9368	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.2.1.1	0.979
3rd Layer	2.2.1	0.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	eugene3.00021349	SubName- Full=Putative uncharacterized protein; (745 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.127.161.1	hypothetical protein (339 aa)	•		•		•	•	0.980
	estExt_Genewise1_v1.C_1290095	ribulose-phosphate 3-epimerase (EC-5.1.3.1) (286 aa)	•	•		•	•	•	0.971
	estExt_fgenesh4_pg.C_LG_I2289	SubName- Full=Putative uncharacterized protein; (226 aa)	•			•	•	•	0.970
	gw1.VIII.2574.1	glucose-6-phosphate isomerase (EC-5.3.1.9) (569 aa)	•		•		•	•	0.951
	grail3.0008017101	hypothetical protein (441 aa)	•	•			•	•	0.933
	gw1.II.3030.1	glucose-6-phosphate isomerase (EC-5.3.1.9) (542 aa)					•	•	0.929
	gw1.29.190.1	ribose-phosphate diphosphokinase (EC-2.7.6.1) (340 aa)					•	•	0.927
	estExt_Genewise1_v1.C_LG_IV0988	hypothetical protein (256 aa)					•	•	0.923
	estExt_fgenesh4_pg.C_LG_I1744	triose-phosphate isomerase (EC-5.3.1.1) (255 aa)					•	•	0.922
	grail3.0049021504	RecName- Full=Triosephosphate isomerase; EC=5.3.1.1; (254 aa)					•	•	0.922

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		721
PLN02790		654	PLN02790, PLN02790, transketolase	0.0
COG0021		663	COG0021, TktA, Transketolase [Carbohydrate transpo	0.0
PTZ00089		661	PTZ00089, PTZ00089, transketolase; Provisional	0.0
TIGR00232		653	TIGR00232, tktlase_bact, transketolase, bacterial	0.0
PRK05899		586	PRK05899, PRK05899, transketolase; Reviewed	0.0
PRK12753		663	PRK12753, PRK12753, transketolase; Reviewed	0.0
PRK12754		663	PRK12754, PRK12754, transketolase; Reviewed	0.0
pfam00456		333	pfam00456, Transketolase_N, Transketolase, thiamin	1e-159
cd02012		255	cd02012, TPP_TK, Thiamine pyrophosphate (TPP) fami	1e-117
cd07033		156	cd07033, TPP_PYR_DXS_TK_like, Pyrimidine (PYR) bin	5e-61
pfam02779		172	pfam02779, Transket_pyr, Transketolase, pyrimidine	9e-58
COG3959		243	COG3959, COG3959, Transketolase, N-terminal subuni	1e-43
smart00861		136	smart00861, Transket_pyr, Transketolase, pyrimidin	1e-36
COG3958		312	COG3958, COG3958, Transketolase, C-terminal subuni	6e-30
cd00568		168	cd00568, TPP_enzymes, Thiamine pyrophosphate (TPP)	2e-11
pfam02780		124	pfam02780, Transketolase_C, Transketolase, C-termi	3e-09
PRK05444		580	PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate	6e-09
COG1154		627	COG1154, Dxs, Deoxyxylulose-5-phosphate synthase [	9e-09
TIGR00204		617	TIGR00204, dxs, 1-deoxy-D-xylulose-5-phosphate syn	1e-07
cd02007		195	cd02007, TPP_DXS, Thiamine pyrophosphate (TPP) fam	7e-07
PRK12315		581	PRK12315, PRK12315, 1-deoxy-D-xylulose-5-phosphate	5e-06
PRK12571		641	PRK12571, PRK12571, 1-deoxy-D-xylulose-5-phosphate	6e-06
COG3957		793	COG3957, COG3957, Phosphoketolase [Carbohydrate tr	1e-05
cd02000		293	cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosph	1e-04
cd02017		386	cd02017, TPP_E1_EcPDC_like, Thiamine pyrophosphate	2e-04
PLN02234		641	PLN02234, PLN02234, 1-deoxy-D-xylulose-5-phosphate	4e-04
COG2609		887	COG2609, AceE, Pyruvate dehydrogenase complex, deh	5e-04
pfam02775		151	pfam02775, TPP_enzyme_C, Thiamine pyrophosphate en	0.001
COG2609		887	COG2609, AceE, Pyruvate dehydrogenase complex, deh	0.002
PLN02582		677	PLN02582, PLN02582, 1-deoxy-D-xylulose-5-phosphate	0.002

>gnl\|CDD\|215424 PLN02790, PLN02790, transketolase	Back alignment and domain information

 Score = 1330 bits (3445), Expect = 0.0
 Identities = 546/654 (83%), Positives = 588/654 (89%), Gaps = 27/654 (4%)

Query: 95  IRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCML 154
           IRFLA+DAV KANSGHPGLPMGCAPMGH+LYDEVM+YNPKNPYWFNRDRFVLSAGHGCML
Sbjct: 1   IRFLAIDAVNKANSGHPGLPMGCAPMGHVLYDEVMKYNPKNPYWFNRDRFVLSAGHGCML 60

Query: 155 QYALLHLAGYDSVQ---------------------------VTTGPLGQGMANAVGLALA 187
           QYALLHLAGYDSVQ                           VTTGPLGQG+ANAVGLALA
Sbjct: 61  QYALLHLAGYDSVQMEDLKQFRQWGSRTPGHPENFETPGIEVTTGPLGQGIANAVGLALA 120

Query: 188 EKHLAARYNKPDNEIVDHYTYVILGDGCQMEGIANEASSLAGHLGLGKLIAFYDDNHISI 247
           EKHLAAR+NKPD++IVDHYTY ILGDGCQMEGI+NEA+SLAGH GLGKLI  YDDNHISI
Sbjct: 121 EKHLAARFNKPDHKIVDHYTYCILGDGCQMEGISNEAASLAGHWGLGKLIVLYDDNHISI 180

Query: 248 DGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPTLIRVTTTIG 307
           DGDTEIAFTE+VDKR+E LGWH IWVKNGNT YD+IRAAIKEAKAVTDKPTLI+VTTTIG
Sbjct: 181 DGDTEIAFTEDVDKRYEALGWHTIWVKNGNTDYDEIRAAIKEAKAVTDKPTLIKVTTTIG 240

Query: 308 FGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEW 367
           +GSPNKANSYSVHG+ALG KEVDATRKNLGWPYEPFHVPEDVK HWS+H  EGA LEAEW
Sbjct: 241 YGSPNKANSYSVHGAALGEKEVDATRKNLGWPYEPFHVPEDVKSHWSKHTKEGAALEAEW 300

Query: 368 NAKFAEYEKKYPEEAAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKT 427
           NAKFAEY+KKYPEEAAE KS+ SG+LP+GWEKALPT+TPE PA+ATRNLSQ CLNALAK 
Sbjct: 301 NAKFAEYKKKYPEEAAELKSLISGELPSGWEKALPTFTPEDPADATRNLSQKCLNALAKV 360

Query: 428 LPGLLGGSADLASSNMTLLKMFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSPGLIP 487
           LPGL+GGSADLASSNMTLLK FGDFQKDTPEERNVRFGVREHGMGAICNGIALHS GLIP
Sbjct: 361 LPGLIGGSADLASSNMTLLKDFGDFQKDTPEERNVRFGVREHGMGAICNGIALHSSGLIP 420

Query: 488 YCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLASFRAMPNIL 547
           YCATFFVFTDYMRAA+R+SAL EAGVIYVMTHDSIGLGEDGPTHQPIEHLAS RAMPNIL
Sbjct: 421 YCATFFVFTDYMRAAMRLSALSEAGVIYVMTHDSIGLGEDGPTHQPIEHLASLRAMPNIL 480

Query: 548 MLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNK 607
           MLRPADGNETAGAYKVAV NRKRP++LALSRQK+P+L GTSI+GVEKG Y+ISDNSSGNK
Sbjct: 481 MLRPADGNETAGAYKVAVTNRKRPTVLALSRQKVPNLPGTSIEGVEKGGYVISDNSSGNK 540

Query: 608 PDVILIGTGSELEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARV 667
           PD+ILIGTGSELEIAAKAA+ELRK GK VRVVS V WELF+EQSD YKESVLP++V+ARV
Sbjct: 541 PDLILIGTGSELEIAAKAAKELRKEGKKVRVVSMVCWELFEEQSDEYKESVLPSSVTARV 600

Query: 668 SIEAGSTFGWEKIVGSKGKAIGIDRFGASAPAGKIYKEFGITAEAVITAAKEVC 721
           S+EAGSTFGWEK VGSKGK IG+DRFGASAPAG +YKEFG T E V+ AAK + 
Sbjct: 601 SVEAGSTFGWEKYVGSKGKVIGVDRFGASAPAGILYKEFGFTVENVVAAAKSLL 654

Length = 654

>gnl\|CDD\|223100 COG0021, TktA, Transketolase [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|173383 PTZ00089, PTZ00089, transketolase; Provisional	Back alignment and domain information

>gnl\|CDD\|232887 TIGR00232, tktlase_bact, transketolase, bacterial and yeast	Back alignment and domain information

>gnl\|CDD\|235639 PRK05899, PRK05899, transketolase; Reviewed	Back alignment and domain information

>gnl\|CDD\|183723 PRK12753, PRK12753, transketolase; Reviewed	Back alignment and domain information

>gnl\|CDD\|183724 PRK12754, PRK12754, transketolase; Reviewed	Back alignment and domain information

>gnl\|CDD\|144157 pfam00456, Transketolase_N, Transketolase, thiamine diphosphate binding domain	Back alignment and domain information

>gnl\|CDD\|238970 cd02012, TPP_TK, Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates	Back alignment and domain information

>gnl\|CDD\|132916 cd07033, TPP_PYR_DXS_TK_like, Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins	Back alignment and domain information

>gnl\|CDD\|217226 pfam02779, Transket_pyr, Transketolase, pyrimidine binding domain	Back alignment and domain information

>gnl\|CDD\|226468 COG3959, COG3959, Transketolase, N-terminal subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|214865 smart00861, Transket_pyr, Transketolase, pyrimidine binding domain	Back alignment and domain information

>gnl\|CDD\|226467 COG3958, COG3958, Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|238318 cd00568, TPP_enzymes, Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor	Back alignment and domain information

>gnl\|CDD\|217227 pfam02780, Transketolase_C, Transketolase, C-terminal domain	Back alignment and domain information

>gnl\|CDD\|235470 PRK05444, PRK05444, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|224076 COG1154, Dxs, Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism]	Back alignment and domain information

>gnl\|CDD\|129308 TIGR00204, dxs, 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>gnl\|CDD\|238965 cd02007, TPP_DXS, Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis	Back alignment and domain information

>gnl\|CDD\|237053 PRK12315, PRK12315, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|183601 PRK12571, PRK12571, 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>gnl\|CDD\|226466 COG3957, COG3957, Phosphoketolase [Carbohydrate transport and metabolism]	Back alignment and domain information

>gnl\|CDD\|238958 cd02000, TPP_E1_PDC_ADC_BCADC, Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)	Back alignment and domain information

>gnl\|CDD\|238975 cd02017, TPP_E1_EcPDC_like, Thiamine pyrophosphate (TPP) family, E1 of E	Back alignment and domain information

>gnl\|CDD\|177878 PLN02234, PLN02234, 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>gnl\|CDD\|225329 COG2609, AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion]	Back alignment and domain information

>gnl\|CDD\|217223 pfam02775, TPP_enzyme_C, Thiamine pyrophosphate enzyme, C-terminal TPP binding domain	Back alignment and domain information

>gnl\|CDD\|225329 COG2609, AceE, Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion]	Back alignment and domain information

>gnl\|CDD\|178194 PLN02582, PLN02582, 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		721
COG0021		663	TktA Transketolase [Carbohydrate transport and met	100.0
PRK12754		663	transketolase; Reviewed	100.0
PRK12753		663	transketolase; Reviewed	100.0
PLN02790		654	transketolase	100.0
TIGR00232		653	tktlase_bact transketolase, bacterial and yeast. T	100.0
PTZ00089		661	transketolase; Provisional	100.0
KOG0523		632	consensus Transketolase [Carbohydrate transport an	100.0
PRK05899		624	transketolase; Reviewed	100.0
COG1154		627	Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme m	100.0
PLN02582		677	1-deoxy-D-xylulose-5-phosphate synthase	100.0
TIGR00204		617	dxs 1-deoxy-D-xylulose-5-phosphate synthase. DXP s	100.0
PRK13012		896	2-oxoacid dehydrogenase subunit E1; Provisional	100.0
PRK12571		641	1-deoxy-D-xylulose-5-phosphate synthase; Provision	100.0
PRK05444		580	1-deoxy-D-xylulose-5-phosphate synthase; Provision	100.0
PLN02225		701	1-deoxy-D-xylulose-5-phosphate synthase	100.0
PLN02234		641	1-deoxy-D-xylulose-5-phosphate synthase	100.0
PRK12315		581	1-deoxy-D-xylulose-5-phosphate synthase; Provision	100.0
TIGR03186		889	AKGDH_not_PDH alpha-ketoglutarate dehydrogenase. S	100.0
PRK09405		891	aceE pyruvate dehydrogenase subunit E1; Reviewed	100.0
TIGR00759		885	aceE pyruvate dehydrogenase E1 component, homodime	100.0
PF00456		332	Transketolase_N: Transketolase, thiamine diphospha	100.0
COG3958		312	Transketolase, C-terminal subunit [Carbohydrate tr	100.0
PRK05261		785	putative phosphoketolase; Provisional	100.0
COG2609		887	AceE Pyruvate dehydrogenase complex, dehydrogenase	100.0
COG3959		243	Transketolase, N-terminal subunit [Carbohydrate tr	100.0
CHL00144		327	odpB pyruvate dehydrogenase E1 component beta subu	100.0
PLN02683		356	pyruvate dehydrogenase E1 component subunit beta	100.0
PRK11892		464	pyruvate dehydrogenase subunit beta; Provisional	100.0
PRK09212		327	pyruvate dehydrogenase subunit beta; Validated	100.0
cd02017		386	TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) fam	100.0
PTZ00182		355	3-methyl-2-oxobutanate dehydrogenase; Provisional	100.0
cd02012		255	TPP_TK Thiamine pyrophosphate (TPP) family, Transk	100.0
COG0022		324	AcoB Pyruvate/2-oxoglutarate dehydrogenase complex	100.0
PRK09404		924	sucA 2-oxoglutarate dehydrogenase E1 component; Re	100.0
TIGR00239		929	2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 compon	100.0
PF13292		270	DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate syn	100.0
cd02007		195	TPP_DXS Thiamine pyrophosphate (TPP) family, DXS s	100.0
KOG0524		359	consensus Pyruvate dehydrogenase E1, beta subunit	100.0
cd07033		156	TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domai	100.0
PF02779		178	Transket_pyr: Transketolase, pyrimidine binding do	100.0
cd07036		167	TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding	99.97
COG3957		793	Phosphoketolase [Carbohydrate transport and metabo	99.97
smart00861		168	Transket_pyr Transketolase, pyrimidine binding dom	99.97
KOG0525		362	consensus Branched chain alpha-keto acid dehydroge	99.96
COG1071		358	AcoA Pyruvate/2-oxoglutarate dehydrogenase complex	99.9
PLN02374		433	pyruvate dehydrogenase (acetyl-transferring)	99.9
cd02000		293	TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP)	99.9
CHL00149		341	odpA pyruvate dehydrogenase E1 component alpha sub	99.89
cd02011		227	TPP_PK Thiamine pyrophosphate (TPP) family, Phosph	99.88
PF00676		300	E1_dh: Dehydrogenase E1 component; InterPro: IPR00	99.88
PLN02269		362	Pyruvate dehydrogenase E1 component subunit alpha	99.87
TIGR03181		341	PDH_E1_alph_x pyruvate dehydrogenase E1 component,	99.87
TIGR03182		315	PDH_E1_alph_y pyruvate dehydrogenase E1 component,	99.86
cd00568		168	TPP_enzymes Thiamine pyrophosphate (TPP) enzyme fa	99.8
cd02004		172	TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) fam	99.79
cd02003		205	TPP_IolD Thiamine pyrophosphate (TPP) family, IolD	99.77
cd02008		178	TPP_IOR_alpha Thiamine pyrophosphate (TPP) family,	99.77
cd02013		196	TPP_Xsc_like Thiamine pyrophosphate (TPP) family,	99.77
KOG0225		394	consensus Pyruvate dehydrogenase E1, alpha subunit	99.76
cd02016		265	TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) fami	99.75
cd02015		186	TPP_AHAS Thiamine pyrophosphate (TPP) family, Acet	99.75
cd02006		202	TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl s	99.75
cd03371		188	TPP_PpyrDC Thiamine pyrophosphate (TPP) family, Pp	99.75
PRK06163		202	hypothetical protein; Provisional	99.74
cd02002		178	TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC	99.74
cd02001		157	TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) famil	99.73
cd02010		177	TPP_ALS Thiamine pyrophosphate (TPP) family, Aceto	99.72
cd02005		183	TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family,	99.72
KOG1182		432	consensus Branched chain alpha-keto acid dehydroge	99.7
cd02014		178	TPP_POX Thiamine pyrophosphate (TPP) family, Pyruv	99.7
TIGR03846		181	sulfopy_beta sulfopyruvate decarboxylase, beta sub	99.69
cd02009		175	TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) fa	99.68
cd03372		179	TPP_ComE Thiamine pyrophosphate (TPP) family, ComE	99.66
COG0028		550	IlvB Thiamine pyrophosphate-requiring enzymes [ace	99.65
TIGR03297		361	Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi	99.64
PF09364		379	XFP_N: XFP N-terminal domain; InterPro: IPR018970	99.64
cd03375		193	TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-o	99.64
PRK07586		514	hypothetical protein; Validated	99.63
PRK12474		518	hypothetical protein; Provisional	99.63
PF02775		153	TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-ter	99.63
PF02780		124	Transketolase_C: Transketolase, C-terminal domain;	99.62
PRK06154		565	hypothetical protein; Provisional	99.62
TIGR01504		588	glyox_carbo_lig glyoxylate carboligase. Glyoxylate	99.61
TIGR02418		539	acolac_catab acetolactate synthase, catabolic. Ace	99.6
PRK08322		547	acetolactate synthase; Reviewed	99.59
PRK09124		574	pyruvate dehydrogenase; Provisional	99.59
PRK08979		572	acetolactate synthase 3 catalytic subunit; Validat	99.59
PRK07979		574	acetolactate synthase 3 catalytic subunit; Validat	99.58
PRK07092		530	benzoylformate decarboxylase; Reviewed	99.58
TIGR03393		539	indolpyr_decarb indolepyruvate decarboxylase, Erwi	99.58
PRK05858		542	hypothetical protein; Provisional	99.58
PRK06546		578	pyruvate dehydrogenase; Provisional	99.58
PRK08978		548	acetolactate synthase 2 catalytic subunit; Reviewe	99.58
PRK08611		576	pyruvate oxidase; Provisional	99.58
PRK06456		572	acetolactate synthase catalytic subunit; Reviewed	99.58
PRK11269		591	glyoxylate carboligase; Provisional	99.58
PRK06965		587	acetolactate synthase 3 catalytic subunit; Validat	99.58
PRK08273		597	thiamine pyrophosphate protein; Provisional	99.57
PRK09107		595	acetolactate synthase 3 catalytic subunit; Validat	99.57
PRK06112		578	acetolactate synthase catalytic subunit; Validated	99.57
PRK08199		557	thiamine pyrophosphate protein; Validated	99.57
PRK06457		549	pyruvate dehydrogenase; Provisional	99.57
PRK06466		574	acetolactate synthase 3 catalytic subunit; Validat	99.57
TIGR03457		579	sulphoacet_xsc sulfoacetaldehyde acetyltransferase	99.56
PRK08527		563	acetolactate synthase 3 catalytic subunit; Validat	99.56
PRK08266		542	hypothetical protein; Provisional	99.56
PRK07418		616	acetolactate synthase 3 catalytic subunit; Reviewe	99.56
PRK07524		535	hypothetical protein; Provisional	99.56
TIGR02720		575	pyruv_oxi_spxB pyruvate oxidase. Members of this f	99.56
PRK07064		544	hypothetical protein; Provisional	99.56
PLN02573		578	pyruvate decarboxylase	99.56
cd03376		235	TPP_PFOR_porB_like Thiamine pyrophosphate (TPP fam	99.56
PRK08617		552	acetolactate synthase; Reviewed	99.55
PLN02470		585	acetolactate synthase	99.55
PRK12270		1228	kgd alpha-ketoglutarate decarboxylase; Reviewed	99.55
PRK06725		570	acetolactate synthase 3 catalytic subunit; Validat	99.55
PRK07710		571	acetolactate synthase catalytic subunit; Reviewed	99.55
PRK06048		561	acetolactate synthase 3 catalytic subunit; Reviewe	99.54
PRK07525		588	sulfoacetaldehyde acetyltransferase; Validated	99.54
PRK08155		564	acetolactate synthase catalytic subunit; Validated	99.53
CHL00099		585	ilvB acetohydroxyacid synthase large subunit	99.53
PRK07789		612	acetolactate synthase 1 catalytic subunit; Validat	99.53
PRK07282		566	acetolactate synthase catalytic subunit; Reviewed	99.53
PRK06276		586	acetolactate synthase catalytic subunit; Reviewed	99.52
PRK06882		574	acetolactate synthase 3 catalytic subunit; Validat	99.52
TIGR00118		558	acolac_lg acetolactate synthase, large subunit, bi	99.52
TIGR03254		554	oxalate_oxc oxalyl-CoA decarboxylase. In a number	99.5
TIGR03394		535	indol_phenyl_DC indolepyruvate/phenylpyruvate deca	99.5
PRK07449		568	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1	99.49
PRK09259		569	putative oxalyl-CoA decarboxylase; Validated	99.49
COG3961		557	Pyruvate decarboxylase and related thiamine pyroph	99.49
PRK11869		280	2-oxoacid ferredoxin oxidoreductase subunit beta;	99.46
cd02018		237	TPP_PFOR Thiamine pyrophosphate (TPP family), Pyru	99.45
PRK11866		279	2-oxoacid ferredoxin oxidoreductase subunit beta;	99.44
PRK05778		301	2-oxoglutarate ferredoxin oxidoreductase subunit b	99.43
PRK08327		569	acetolactate synthase catalytic subunit; Validated	99.42
PRK09628		277	oorB 2-oxoglutarate-acceptor oxidoreductase subuni	99.42
PRK11867		286	2-oxoglutarate ferredoxin oxidoreductase subunit b	99.4
TIGR02177		287	PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta	99.4
TIGR03336		595	IOR_alpha indolepyruvate ferredoxin oxidoreductase	99.33
TIGR03336		595	IOR_alpha indolepyruvate ferredoxin oxidoreductase	99.33
PRK07119		352	2-ketoisovalerate ferredoxin reductase; Validated	99.29
KOG1185		571	consensus Thiamine pyrophosphate-requiring enzyme	99.23
cd06586		154	TPP_enzyme_PYR Pyrimidine (PYR) binding domain of	99.17
PRK08659		376	2-oxoglutarate ferredoxin oxidoreductase subunit a	99.15
COG3962		617	Acetolactate synthase [Amino acid transport and me	99.15
PLN02980		1655	2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi	99.14
KOG4166		675	consensus Thiamine pyrophosphate-requiring enzyme	99.1
KOG1184		561	consensus Thiamine pyrophosphate-requiring enzyme	99.1
PRK11864		300	2-ketoisovalerate ferredoxin oxidoreductase subuni	99.08
PRK09627		375	oorA 2-oxoglutarate-acceptor oxidoreductase subuni	99.03
KOG0451		913	consensus Predicted 2-oxoglutarate dehydrogenase,	99.02
PRK09622		407	porA pyruvate flavodoxin oxidoreductase subunit al	99.02
PF03894		179	XFP: D-xylulose 5-phosphate/D-fructose 6-phosphate	98.89
PRK11865		299	pyruvate ferredoxin oxidoreductase subunit beta; P	98.75
PRK08367		394	porA pyruvate ferredoxin oxidoreductase subunit al	98.75
PRK08366		390	vorA 2-ketoisovalerate ferredoxin oxidoreductase s	98.71
TIGR03710		562	OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha s	98.69
COG0567		906	SucA 2-oxoglutarate dehydrogenase complex, dehydro	98.49
COG3960		592	Glyoxylate carboligase [General function predictio	98.39
KOG0450		1017	consensus 2-oxoglutarate dehydrogenase, E1 subunit	98.31
TIGR02176		1165	pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxid	98.12
COG4231		640	Indolepyruvate ferredoxin oxidoreductase, alpha an	97.8
COG4231		640	Indolepyruvate ferredoxin oxidoreductase, alpha an	97.71
COG1013		294	PorB Pyruvate:ferredoxin oxidoreductase and relate	97.68
COG1165		566	MenD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-car	97.6
COG0674		365	PorA Pyruvate:ferredoxin oxidoreductase and relate	97.46
TIGR03297		361	Ppyr-DeCO2ase phosphonopyruvate decarboxylase. Thi	97.14
PF01855		230	POR_N: Pyruvate flavodoxin/ferredoxin oxidoreducta	96.92
PRK09193		1165	indolepyruvate ferredoxin oxidoreductase; Validate	96.82
PRK13030		1159	2-oxoacid ferredoxin oxidoreductase; Provisional	96.73
cd07035		155	TPP_PYR_POX_like Pyrimidine (PYR) binding domain o	96.63
cd07034		160	TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) bindi	96.6
cd03377		365	TPP_PFOR_PNO Thiamine pyrophosphate (TPP family),	96.52
PRK13029		1186	2-oxoacid ferredoxin oxidoreductase; Provisional	96.36
PF02776		172	TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-ter	96.36
PRK13030		1159	2-oxoacid ferredoxin oxidoreductase; Provisional	95.82
TIGR02176		1165	pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxid	95.5
TIGR03845		157	sulfopyru_alph sulfopyruvate decarboxylase, alpha	95.49
PRK09193		1165	indolepyruvate ferredoxin oxidoreductase; Validate	95.3
cd07037		162	TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-	95.26
cd07039		164	TPP_PYR_POX Pyrimidine (PYR) binding domain of POX	94.7
TIGR02418		539	acolac_catab acetolactate synthase, catabolic. Ace	94.28
PRK07092		530	benzoylformate decarboxylase; Reviewed	94.07
cd07033		156	TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domai	93.93
cd02018		237	TPP_PFOR Thiamine pyrophosphate (TPP family), Pyru	93.7
cd01460		266	vWA_midasin VWA_Midasin: Midasin is a member of th	93.52
PRK13029		1186	2-oxoacid ferredoxin oxidoreductase; Provisional	93.33
PRK07586		514	hypothetical protein; Validated	93.04
PF09363		203	XFP_C: XFP C-terminal domain; InterPro: IPR018969	92.64
PRK05858		542	hypothetical protein; Provisional	92.53
PRK07064		544	hypothetical protein; Provisional	92.33
PRK06466		574	acetolactate synthase 3 catalytic subunit; Validat	92.27
PRK08199		557	thiamine pyrophosphate protein; Validated	91.86
PRK08322		547	acetolactate synthase; Reviewed	91.67
PRK08266		542	hypothetical protein; Provisional	91.62
TIGR00118		558	acolac_lg acetolactate synthase, large subunit, bi	91.55
cd07036		167	TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding	91.51
cd03376		235	TPP_PFOR_porB_like Thiamine pyrophosphate (TPP fam	91.48
cd02014		178	TPP_POX Thiamine pyrophosphate (TPP) family, Pyruv	91.46
PRK06112		578	acetolactate synthase catalytic subunit; Validated	91.4
cd02004		172	TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) fam	91.37
PRK07524		535	hypothetical protein; Provisional	91.33
cd07038		162	TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding dom	91.23
PRK08155		564	acetolactate synthase catalytic subunit; Validated	91.21
PRK06456		572	acetolactate synthase catalytic subunit; Reviewed	91.06
PRK08617		552	acetolactate synthase; Reviewed	91.0
TIGR01504		588	glyox_carbo_lig glyoxylate carboligase. Glyoxylate	90.82
PRK11269		591	glyoxylate carboligase; Provisional	90.81
cd02010		177	TPP_ALS Thiamine pyrophosphate (TPP) family, Aceto	90.69
PRK07979		574	acetolactate synthase 3 catalytic subunit; Validat	90.6
PRK08978		548	acetolactate synthase 2 catalytic subunit; Reviewe	90.59
cd02001		157	TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) famil	90.55
PRK06457		549	pyruvate dehydrogenase; Provisional	90.34
cd02009		175	TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) fa	90.29
TIGR02177		287	PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta	90.26
PRK07525		588	sulfoacetaldehyde acetyltransferase; Validated	90.17
PRK07710		571	acetolactate synthase catalytic subunit; Reviewed	90.08
PRK06276		586	acetolactate synthase catalytic subunit; Reviewed	90.03
PRK11866		279	2-oxoacid ferredoxin oxidoreductase subunit beta;	89.68
PRK07789		612	acetolactate synthase 1 catalytic subunit; Validat	89.58
PRK08611		576	pyruvate oxidase; Provisional	89.41
PRK09107		595	acetolactate synthase 3 catalytic subunit; Validat	89.21
PRK07282		566	acetolactate synthase catalytic subunit; Reviewed	88.99
PRK08527		563	acetolactate synthase 3 catalytic subunit; Validat	88.9
cd06586		154	TPP_enzyme_PYR Pyrimidine (PYR) binding domain of	88.77
PRK06882		574	acetolactate synthase 3 catalytic subunit; Validat	88.74
PRK06965		587	acetolactate synthase 3 catalytic subunit; Validat	88.68
PRK11864		300	2-ketoisovalerate ferredoxin oxidoreductase subuni	88.62
PRK07449		568	2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1	88.61
TIGR03254		554	oxalate_oxc oxalyl-CoA decarboxylase. In a number	88.59
PRK09124		574	pyruvate dehydrogenase; Provisional	88.52
TIGR03845		157	sulfopyru_alph sulfopyruvate decarboxylase, alpha	88.48
PRK09259		569	putative oxalyl-CoA decarboxylase; Validated	88.42
TIGR03457		579	sulphoacet_xsc sulfoacetaldehyde acetyltransferase	88.26
PLN02470		585	acetolactate synthase	88.01
PRK07418		616	acetolactate synthase 3 catalytic subunit; Reviewe	87.96
PRK06725		570	acetolactate synthase 3 catalytic subunit; Validat	87.66
COG4032		172	Predicted thiamine-pyrophosphate-binding protein [	87.35
PRK06048		561	acetolactate synthase 3 catalytic subunit; Reviewe	87.19
TIGR02720		575	pyruv_oxi_spxB pyruvate oxidase. Members of this f	87.15
TIGR00173		432	menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohex	87.11
PF02776		172	TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-ter	87.04
PRK08979		572	acetolactate synthase 3 catalytic subunit; Validat	86.81
PRK08327		569	acetolactate synthase catalytic subunit; Validated	86.64
PRK06546		578	pyruvate dehydrogenase; Provisional	86.5
PRK11867		286	2-oxoglutarate ferredoxin oxidoreductase subunit b	86.32
PRK12474		518	hypothetical protein; Provisional	86.12
PRK11865		299	pyruvate ferredoxin oxidoreductase subunit beta; P	86.01
cd02008		178	TPP_IOR_alpha Thiamine pyrophosphate (TPP) family,	85.95
CHL00099		585	ilvB acetohydroxyacid synthase large subunit	85.93
PF02779		178	Transket_pyr: Transketolase, pyrimidine binding do	85.77
PLN02683		356	pyruvate dehydrogenase E1 component subunit beta	85.74
cd02015		186	TPP_AHAS Thiamine pyrophosphate (TPP) family, Acet	85.37
cd02003		205	TPP_IolD Thiamine pyrophosphate (TPP) family, IolD	84.91
cd02013		196	TPP_Xsc_like Thiamine pyrophosphate (TPP) family,	84.12
cd00568		168	TPP_enzymes Thiamine pyrophosphate (TPP) enzyme fa	83.92
cd03375		193	TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-o	83.59
PRK08273		597	thiamine pyrophosphate protein; Provisional	83.49
PF02775		153	TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-ter	83.43
cd02006		202	TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl s	82.99
PLN02573		578	pyruvate decarboxylase	82.96
cd07035		155	TPP_PYR_POX_like Pyrimidine (PYR) binding domain o	81.98
TIGR00204		617	dxs 1-deoxy-D-xylulose-5-phosphate synthase. DXP s	81.36
smart00861		168	Transket_pyr Transketolase, pyrimidine binding dom	81.24
PRK05899		624	transketolase; Reviewed	81.18
cd02012		255	TPP_TK Thiamine pyrophosphate (TPP) family, Transk	81.14
PRK11892		464	pyruvate dehydrogenase subunit beta; Provisional	80.9
PLN02980		1655	2-oxoglutarate decarboxylase/ hydro-lyase/ magnesi	80.6
PRK12571		641	1-deoxy-D-xylulose-5-phosphate synthase; Provision	80.37

>COG0021 TktA Transketolase [Carbohydrate transport and metabolism]	Back alignment and domain information

Probab=100.00  E-value=4.2e-135  Score=1113.90  Aligned_cols=634  Identities=58%  Similarity=0.955  Sum_probs=604.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHHhhhhcCCCCCCCCCCCeEEEcCCcchHHHHHHHHHhCC
Q 004970           85 AALVEKSVNTIRFLAVDAVEKANSGHPGLPMGCAPMGHILYDEVMRYNPKNPYWFNRDRFVLSAGHGCMLQYALLHLAGY  164 (721)
Q Consensus        85 ~~~l~~~a~~iR~~~~~~~~~a~~GH~g~~ls~~~l~~aL~~~~l~~~~~~p~~~~~D~~V~s~Gh~~~~~y~~l~l~G~  164 (721)
                      .++.+++++.||.+.+++|.+|++||||.+||++||.++||..+|++||+||+|++|||||+|.||+||.+|+++++.||
T Consensus         3 ~~~~~~~~naiR~Ls~davqkAnSGHPG~pmG~A~ia~~L~~~~l~~nP~nP~W~nRDRFVLSaGHgSmllYsllhl~Gy   82 (663)
T COG0021           3 MKIDKLLANAIRFLSMDAVQKANSGHPGAPMGAADIAYVLWTRFLKHNPDNPKWINRDRFVLSAGHGSMLLYSLLHLTGY   82 (663)
T ss_pred             chHHHHHHHHHHHHHHHHHHhccCCCCCCCccHHHHHHHHHHHHhcCCCCCCCCCCCccEEecCCchhHHHHHHHHHccC
Confidence            34578899999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             C--------------------------CcccCccccchhHHHHHHHHHHHHHhhhhcCCCCCCcCCcEEEEEECCCccCh
Q 004970          165 D--------------------------SVQVTTGPLGQGMANAVGLALAEKHLAARYNKPDNEIVDHYTYVILGDGCQME  218 (721)
Q Consensus       165 ~--------------------------gie~~~G~lG~gl~~AvG~AlA~~~~~~~~~~~~~~~~~~~vv~viGDG~~~e  218 (721)
                      +                          |||.+||+||||++.|||||||.++++++||+|++++.|++|||++||||+||
T Consensus        83 ~ls~edLk~FRQ~~SkTpGHPE~~~t~GVe~TTGPLGQGianAVGmAlAe~~La~~fn~~g~~ivdh~tYvl~GDGclmE  162 (663)
T COG0021          83 DLSLEDLKNFRQLGSKTPGHPEYGHTPGVEATTGPLGQGLANAVGMALAEKHLAALFNRPGFDIVDHYTYVLVGDGCLME  162 (663)
T ss_pred             CCCHHHHHhhccCCCCCCCCCCcCCCCCeEeccCccchhHHHHHHHHHHHHHHHhhhCCCCCccccceEEEEecCchHhc
Confidence            4                          88999999999999999999999999999999999999999999999999999


Q ss_pred             hhHHHHHHHHHhcCCCeEEEEEECCCccccccccccccccHHHHHhhCCCeEEEeccCCCCHHHHHHHHHHHHhcCCCCE
Q 004970          219 GIANEASSLAGHLGLGKLIAFYDDNHISIDGDTEIAFTENVDKRFEGLGWHVIWVKNGNTGYDDIRAAIKEAKAVTDKPT  298 (721)
Q Consensus       219 G~~~Eal~~a~~~~L~~li~IvddN~~~i~~~~~~~~~~~~~~~~~a~G~~~~~v~dG~~d~~~l~~al~~a~~~~~~P~  298 (721)
                      |+++||+.+|++++|++||+|+|+|+++|++.+...+.+|+.++|+||||+++.++||| |+++|.+|+++|++.++||+
T Consensus       163 Gvs~EA~slAG~l~L~kLIvlyD~N~IsiDG~~~~~f~ed~~~RfeAyGW~vi~~~DG~-D~e~I~~Ai~~Ak~~~dkPt  241 (663)
T COG0021         163 GVSHEAASLAGHLKLGKLIVLYDSNDISIDGDTSLSFTEDVAKRFEAYGWNVIRVIDGH-DLEAIDKAIEEAKASTDKPT  241 (663)
T ss_pred             ccHHHHHHHHhhcCCCcEEEEEeCCCceeccCcccccchhHHHHHHhcCCeEEEecCCC-CHHHHHHHHHHHHhcCCCCe
Confidence            99999999999999999999999999999999999999999999999999999888999 99999999999998778999


Q ss_pred             EEEEEEeeccCCCCCCCCCcccCCCCChhhHHHHHHhcCCCCCCCCCchhhHHHHHHHHhhhhhhHHHHHHHHHHHHhhC
Q 004970          299 LIRVTTTIGFGSPNKANSYSVHGSALGAKEVDATRKNLGWPYEPFHVPEDVKKHWSRHVAEGATLEAEWNAKFAEYEKKY  378 (721)
Q Consensus       299 lI~~~T~kg~G~~~~~~~~~~H~~~~~~~~~~~~~~~l~~~~~p~~v~~ev~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  378 (721)
                      +|+|+|++|+|.++++++.++||.||++++++.++++++|+.++|.+|+++++.|+...+++...+++|++.+..|+++|
T Consensus       242 lI~~kTiIG~Gsp~kegt~~~HGapLg~~ev~~~k~~lgw~~~~F~vp~ev~~~~~~~~~~g~~~~~~W~~~~~~y~~~~  321 (663)
T COG0021         242 LIIVKTIIGKGSPNKEGTHKVHGAPLGEEEVAAAKKALGWEPEPFEVPEEVYAAFRAVEERGAKAEAAWNELFAAYKKKY  321 (663)
T ss_pred             EEEEEeeeecCCCCcCCCccccCCCCCHHHHHHHHHHhCCCCCceecCHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhC
Confidence            99999999999999988999999999999999999999999888999999999999656688889999999999999999


Q ss_pred             hHHHHHHHHHhcCCCCCcccccCCCCCCCCcchhHHHHHHHHHHHHHHhCCCeEEEeccCCCcccchhcccccCcccCCC
Q 004970          379 PEEAAEFKSISSGQLPAGWEKALPTYTPESPAEATRNLSQTCLNALAKTLPGLLGGSADLASSNMTLLKMFGDFQKDTPE  458 (721)
Q Consensus       379 p~~~~~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~r~a~~~~L~~l~~~~p~vv~~saDl~~s~~~~~~~~~~f~~~~~p  458 (721)
                      ||++++|++++++++|..|...+|.+.......+||++++++|..+.+..|+++.+|+||.+|+++.+++...|..+.|+
T Consensus       322 Pe~~~~~~r~~~~~~p~~~~~~~~~~~~~~~~~ATR~as~~~L~~l~~~~p~l~GGSADLa~Sn~T~~~~~~~~~~~~~~  401 (663)
T COG0021         322 PELAAEFERRLNGELPANWAAFLPKFEANGKSIATRKASGKALNALAKKLPELIGGSADLAPSNLTKISGSGDFSPENYA  401 (663)
T ss_pred             hHHHHHHHHHhcccCchhHHHhhhhhcccccccchHHHHHHHHHHHHhhCccccccCcccccCccccccccCCCCCCCCC
Confidence            99999999999999999998889988654445899999999999999999999999999999999988777788756799


Q ss_pred             CccccCCchHHHHHHHHHHHHhcCCCCccEEEEchhHHHhHHHHHHHhhhcCCcEEEEEecCCcccCCCCCCCCChhhhH
Q 004970          459 ERNVRFGVREHGMGAICNGIALHSPGLIPYCATFFVFTDYMRAAIRISALCEAGVIYVMTHDSIGLGEDGPTHQPIEHLA  538 (721)
Q Consensus       459 ~R~~~~GIaE~~~vg~aaGlA~~G~~~~Piv~~~~~F~~r~~dqir~~a~~~~pV~~v~t~~g~~~g~dG~THq~~edia  538 (721)
                      +|++.+||+|++|.++++|||++|. ++||..||..|++|++++||++|+|++||++|.|||++++|+||||||++|+++
T Consensus       402 gr~i~~GVREf~M~AimNGialhGg-~~pyggTFlvFsdY~r~AiRlaALm~l~~~~V~THDSIgvGEDGPTHqPiEqLa  480 (663)
T COG0021         402 GRYIHFGVREFAMAAIMNGIALHGG-FIPYGGTFLVFSDYARPAVRLAALMGLPVIYVFTHDSIGVGEDGPTHQPVEQLA  480 (663)
T ss_pred             CCeeEEeeHHHHHHHHHHhHHHhcC-ceeecceehhhHhhhhHHHHHHHhcCCCeEEEEecCceecCCCCCCCCcHHHHH
Confidence            9999999999999999999999996 999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCcEEEeeCCHHHHHHHHHHHHHcCCCcEEEEEcCCCCCCCCCCccccccCccEEEecCCCCCCCCEEEEEeChh
Q 004970          539 SFRAMPNILMLRPADGNETAGAYKVAVANRKRPSILALSRQKLPHLAGTSIDGVEKGAYIISDNSSGNKPDVILIGTGSE  618 (721)
Q Consensus       539 ~lr~iPnl~V~~P~d~~e~~~~l~~a~~~~~~P~~Irl~r~~~~~~~~~~~~~~~~G~~~v~~~~~~~g~dvtIva~G~~  618 (721)
                      .||+|||+.|++|||++|+..+++.|+.+.++|++|+++|+++|.++.+..+.+.+|+|++.+.+ +..+|++||++|++
T Consensus       481 ~LRaiPN~~V~RPaD~~Et~~aw~~Al~~~~gPt~LiltRQnlp~l~~t~~~~~~kGaYvl~~~~-~~~pd~iliAtGSE  559 (663)
T COG0021         481 SLRAIPNLSVIRPADANETAAAWKYALERKDGPTALILTRQNLPVLERTDLEGVAKGAYVLKDSG-GEDPDVILIATGSE  559 (663)
T ss_pred             HhhccCCceeEecCChHHHHHHHHHHHhcCCCCeEEEEecCCCCccCCCccccccCccEEEeecC-CCCCCEEEEecccH
Confidence            99999999999999999999999999987799999999999999998876778999999998853 11489999999999


Q ss_pred             HHHHHHHHHHHHhCCCceEEEecCchhhhHHHHHHHhhhhcccCCceEEEEcccccccchhhhcCCceEEEeccCCCCCC
Q 004970          619 LEIAAKAAEELRKGGKAVRVVSFVSWELFDEQSDAYKESVLPAAVSARVSIEAGSTFGWEKIVGSKGKAIGIDRFGASAP  698 (721)
Q Consensus       619 v~~al~Aa~~L~~~Gi~~~VI~~~sl~pld~~~~~~~~~v~~~~~~~~v~vE~~~~~G~~~~v~~~~~~ig~d~f~~~g~  698 (721)
                      |++|++|++.|+++|+.++||+|+|+++||+|..+|+++|++.+...+|.+|.+...||.+|++..+..||++.||.||+
T Consensus       560 V~lAv~Aa~~L~~~~~~vrVVS~P~~~~fe~Q~~~Y~~~vL~~~v~~rvaiEa~~~~~W~ky~g~~g~~ig~~~FG~Sap  639 (663)
T COG0021         560 VELAVEAAKELEAEGIKVRVVSMPSFELFEKQDEEYRESVLPGAVTARVAIEAGSALGWYKYVGLDGAVIGMDSFGASAP  639 (663)
T ss_pred             HHHHHHHHHHHHhcCCceEEEeccchHHHHcCCHHHHHhhccCCccceEEEEeccccchhhhcCCCCcEEeeccCcCCCC
Confidence            99999999999988899999999999999999999999999987654599999999999999988888999999999999


Q ss_pred             HHHHHHHhCCCHHHHHHHHHHhC
Q 004970          699 AGKIYKEFGITAEAVITAAKEVC  721 (721)
Q Consensus       699 ~~~l~~~~gl~~e~I~~~i~~ll  721 (721)
                      .++|+++||+|+|.|+++++++|
T Consensus       640 ~~~l~~~fGft~e~vv~~~~~~l  662 (663)
T COG0021         640 GDELFKEFGFTVENVVAKAKSLL  662 (663)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHhh
Confidence            99999999999999999999875

>PRK12754 transketolase; Reviewed	Back alignment and domain information

>PRK12753 transketolase; Reviewed	Back alignment and domain information

>PLN02790 transketolase	Back alignment and domain information

>TIGR00232 tktlase_bact transketolase, bacterial and yeast	Back alignment and domain information

>PTZ00089 transketolase; Provisional	Back alignment and domain information

>KOG0523 consensus Transketolase [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK05899 transketolase; Reviewed	Back alignment and domain information

>COG1154 Dxs Deoxyxylulose-5-phosphate synthase [Coenzyme metabolism / Lipid metabolism]	Back alignment and domain information

>PLN02582 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>TIGR00204 dxs 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>PRK13012 2-oxoacid dehydrogenase subunit E1; Provisional	Back alignment and domain information

>PRK12571 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>PRK05444 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>PLN02225 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>PLN02234 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>PRK12315 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

>TIGR03186 AKGDH_not_PDH alpha-ketoglutarate dehydrogenase	Back alignment and domain information

>PRK09405 aceE pyruvate dehydrogenase subunit E1; Reviewed	Back alignment and domain information

>TIGR00759 aceE pyruvate dehydrogenase E1 component, homodimeric type	Back alignment and domain information

>PF00456 Transketolase_N: Transketolase, thiamine diphosphate binding domain; InterPro: IPR005474 Transketolase 2	Back alignment and domain information

>COG3958 Transketolase, C-terminal subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK05261 putative phosphoketolase; Provisional	Back alignment and domain information

>COG2609 AceE Pyruvate dehydrogenase complex, dehydrogenase (E1) component [Energy production and conversion]	Back alignment and domain information

>COG3959 Transketolase, N-terminal subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>CHL00144 odpB pyruvate dehydrogenase E1 component beta subunit; Validated	Back alignment and domain information

>PLN02683 pyruvate dehydrogenase E1 component subunit beta	Back alignment and domain information

>PRK11892 pyruvate dehydrogenase subunit beta; Provisional	Back alignment and domain information

>PRK09212 pyruvate dehydrogenase subunit beta; Validated	Back alignment and domain information

>cd02017 TPP_E1_EcPDC_like Thiamine pyrophosphate (TPP) family, E1 of E	Back alignment and domain information

>PTZ00182 3-methyl-2-oxobutanate dehydrogenase; Provisional	Back alignment and domain information

>cd02012 TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates	Back alignment and domain information

>COG0022 AcoB Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit [Energy production and conversion]	Back alignment and domain information

>PRK09404 sucA 2-oxoglutarate dehydrogenase E1 component; Reviewed	Back alignment and domain information

>TIGR00239 2oxo_dh_E1 2-oxoglutarate dehydrogenase, E1 component	Back alignment and domain information

>PF13292 DXP_synthase_N: 1-deoxy-D-xylulose-5-phosphate synthase; PDB: 2O1X_C 2O1S_B	Back alignment and domain information

>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis	Back alignment and domain information

>KOG0524 consensus Pyruvate dehydrogenase E1, beta subunit [Energy production and conversion]	Back alignment and domain information

>cd07033 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins	Back alignment and domain information

>PF02779 Transket_pyr: Transketolase, pyrimidine binding domain; InterPro: IPR005475 Transketolase 2	Back alignment and domain information

>cd07036 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins	Back alignment and domain information

>COG3957 Phosphoketolase [Carbohydrate transport and metabolism]	Back alignment and domain information

>smart00861 Transket_pyr Transketolase, pyrimidine binding domain	Back alignment and domain information

>KOG0525 consensus Branched chain alpha-keto acid dehydrogenase E1, beta subunit [Energy production and conversion]	Back alignment and domain information

>COG1071 AcoA Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit [Energy production and conversion]	Back alignment and domain information

>PLN02374 pyruvate dehydrogenase (acetyl-transferring)	Back alignment and domain information

>cd02000 TPP_E1_PDC_ADC_BCADC Thiamine pyrophosphate (TPP) family, E1 of PDC_ADC_BCADC subfamily, TPP-binding module; composed of proteins similar to the E1 components of the human pyruvate dehydrogenase complex (PDC), the acetoin dehydrogenase complex (ADC) and the branched chain alpha-keto acid dehydrogenase/2-oxoisovalerate dehydrogenase complex (BCADC)	Back alignment and domain information

>CHL00149 odpA pyruvate dehydrogenase E1 component alpha subunit; Reviewed	Back alignment and domain information

>cd02011 TPP_PK Thiamine pyrophosphate (TPP) family, Phosphoketolase (PK) subfamily, TPP-binding module; PK catalyzes the conversion of D-xylulose 5-phosphate and phosphate to acetyl phosphate, D-glyceraldehyde-3-phosphate and H2O	Back alignment and domain information

>PF00676 E1_dh: Dehydrogenase E1 component; InterPro: IPR001017 This entry includes a number of dehydrogenases all of which use thiamine pyrophosphate as a cofactor and are members of a multienzyme complex	Back alignment and domain information

>PLN02269 Pyruvate dehydrogenase E1 component subunit alpha	Back alignment and domain information

>TIGR03181 PDH_E1_alph_x pyruvate dehydrogenase E1 component, alpha subunit	Back alignment and domain information

>TIGR03182 PDH_E1_alph_y pyruvate dehydrogenase E1 component, alpha subunit	Back alignment and domain information

>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor	Back alignment and domain information

>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL)	Back alignment and domain information

>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv	Back alignment and domain information

>cd02008 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, IOR-alpha subfamily, TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit	Back alignment and domain information

>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc)	Back alignment and domain information

>KOG0225 consensus Pyruvate dehydrogenase E1, alpha subunit [Energy production and conversion]	Back alignment and domain information

>cd02016 TPP_E1_OGDC_like Thiamine pyrophosphate (TPP) family, E1 of OGDC-like subfamily, TPP-binding module; composed of proteins similar to the E1 component of the 2-oxoglutarate dehydrogenase multienzyme complex (OGDC)	Back alignment and domain information

>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS	Back alignment and domain information

>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl)	Back alignment and domain information

>cd03371 TPP_PpyrDC Thiamine pyrophosphate (TPP) family, PpyrDC subfamily, TPP-binding module; composed of proteins similar to phosphonopyruvate decarboxylase (PpyrDC) proteins	Back alignment and domain information

>PRK06163 hypothetical protein; Provisional	Back alignment and domain information

>cd02002 TPP_BFDC Thiamine pyrophosphate (TPP) family, BFDC subfamily, TPP-binding module; composed of proteins similar to Pseudomonas putida benzoylformate decarboxylase (BFDC)	Back alignment and domain information

>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase)	Back alignment and domain information

>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation	Back alignment and domain information

>cd02005 TPP_PDC_IPDC Thiamine pyrophosphate (TPP) family, PDC_IPDC subfamily, TPP-binding module; composed of proteins similar to pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC)	Back alignment and domain information

>KOG1182 consensus Branched chain alpha-keto acid dehydrogenase complex, alpha subunit [Energy production and conversion]	Back alignment and domain information

>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions	Back alignment and domain information

>TIGR03846 sulfopy_beta sulfopyruvate decarboxylase, beta subunit	Back alignment and domain information

>cd02009 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) family, SHCHC synthase subfamily, TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD)	Back alignment and domain information

>cd03372 TPP_ComE Thiamine pyrophosphate (TPP) family, ComE subfamily, TPP-binding module; composed of proteins similar to Methanococcus jannaschii sulfopyruvate decarboxylase beta subunit (ComE)	Back alignment and domain information

>COG0028 IlvB Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] [Amino acid transport and metabolism / Coenzyme metabolism]	Back alignment and domain information

>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase	Back alignment and domain information

>PF09364 XFP_N: XFP N-terminal domain; InterPro: IPR018970 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria	Back alignment and domain information

>cd03375 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor	Back alignment and domain information

>PRK07586 hypothetical protein; Validated	Back alignment and domain information

>PRK12474 hypothetical protein; Provisional	Back alignment and domain information

>PF02775 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; InterPro: IPR011766 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor	Back alignment and domain information

>PF02780 Transketolase_C: Transketolase, C-terminal domain; InterPro: IPR005476 Transketolase 2	Back alignment and domain information

>PRK06154 hypothetical protein; Provisional	Back alignment and domain information

>TIGR01504 glyox_carbo_lig glyoxylate carboligase	Back alignment and domain information

>TIGR02418 acolac_catab acetolactate synthase, catabolic	Back alignment and domain information

>PRK08322 acetolactate synthase; Reviewed	Back alignment and domain information

>PRK09124 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>PRK08979 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK07979 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK07092 benzoylformate decarboxylase; Reviewed	Back alignment and domain information

>TIGR03393 indolpyr_decarb indolepyruvate decarboxylase, Erwinia family	Back alignment and domain information

>PRK05858 hypothetical protein; Provisional	Back alignment and domain information

>PRK06546 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed	Back alignment and domain information

>PRK08611 pyruvate oxidase; Provisional	Back alignment and domain information

>PRK06456 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK11269 glyoxylate carboligase; Provisional	Back alignment and domain information

>PRK06965 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK08273 thiamine pyrophosphate protein; Provisional	Back alignment and domain information

>PRK09107 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK06112 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>PRK08199 thiamine pyrophosphate protein; Validated	Back alignment and domain information

>PRK06457 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>PRK06466 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase	Back alignment and domain information

>PRK08527 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK08266 hypothetical protein; Provisional	Back alignment and domain information

>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed	Back alignment and domain information

>PRK07524 hypothetical protein; Provisional	Back alignment and domain information

>TIGR02720 pyruv_oxi_spxB pyruvate oxidase	Back alignment and domain information

>PRK07064 hypothetical protein; Provisional	Back alignment and domain information

>PLN02573 pyruvate decarboxylase	Back alignment and domain information

>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria	Back alignment and domain information

>PRK08617 acetolactate synthase; Reviewed	Back alignment and domain information

>PLN02470 acetolactate synthase	Back alignment and domain information

>PRK12270 kgd alpha-ketoglutarate decarboxylase; Reviewed	Back alignment and domain information

>PRK06725 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK07710 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed	Back alignment and domain information

>PRK07525 sulfoacetaldehyde acetyltransferase; Validated	Back alignment and domain information

>PRK08155 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>CHL00099 ilvB acetohydroxyacid synthase large subunit	Back alignment and domain information

>PRK07789 acetolactate synthase 1 catalytic subunit; Validated	Back alignment and domain information

>PRK07282 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK06276 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK06882 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type	Back alignment and domain information

>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase	Back alignment and domain information

>TIGR03394 indol_phenyl_DC indolepyruvate/phenylpyruvate decarboxylase, Azospirillum family	Back alignment and domain information

>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated	Back alignment and domain information

>PRK09259 putative oxalyl-CoA decarboxylase; Validated	Back alignment and domain information

>COG3961 Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes [Carbohydrate transport and metabolism / Coenzyme metabolism / General function prediction only]	Back alignment and domain information

>PRK11869 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>cd02018 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin oxidoreductase (PFOR) subfamily, TPP-binding module; PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways	Back alignment and domain information

>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>PRK05778 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Validated	Back alignment and domain information

>PRK08327 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>PRK09628 oorB 2-oxoglutarate-acceptor oxidoreductase subunit OorB; Reviewed	Back alignment and domain information

>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed	Back alignment and domain information

>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family	Back alignment and domain information

>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit	Back alignment and domain information

>TIGR03336 IOR_alpha indolepyruvate ferredoxin oxidoreductase, alpha subunit	Back alignment and domain information

>PRK07119 2-ketoisovalerate ferredoxin reductase; Validated	Back alignment and domain information

>KOG1185 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism]	Back alignment and domain information

>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes	Back alignment and domain information

>PRK08659 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Validated	Back alignment and domain information

>COG3962 Acetolactate synthase [Amino acid transport and metabolism]	Back alignment and domain information

>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding	Back alignment and domain information

>KOG4166 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism]	Back alignment and domain information

>KOG1184 consensus Thiamine pyrophosphate-requiring enzyme [Amino acid transport and metabolism; Coenzyme transport and metabolism]	Back alignment and domain information

>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>PRK09627 oorA 2-oxoglutarate-acceptor oxidoreductase subunit OorA; Reviewed	Back alignment and domain information

>KOG0451 consensus Predicted 2-oxoglutarate dehydrogenase, E1 subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>PRK09622 porA pyruvate flavodoxin oxidoreductase subunit alpha; Reviewed	Back alignment and domain information

>PF03894 XFP: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; InterPro: IPR005593 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria	Back alignment and domain information

>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>PRK08367 porA pyruvate ferredoxin oxidoreductase subunit alpha; Reviewed	Back alignment and domain information

>PRK08366 vorA 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha; Reviewed	Back alignment and domain information

>TIGR03710 OAFO_sf 2-oxoacid:acceptor oxidoreductase, alpha subunit	Back alignment and domain information

>COG0567 SucA 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes [Energy production and conversion]	Back alignment and domain information

>COG3960 Glyoxylate carboligase [General function prediction only]	Back alignment and domain information

>KOG0450 consensus 2-oxoglutarate dehydrogenase, E1 subunit [Carbohydrate transport and metabolism]	Back alignment and domain information

>TIGR02176 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric	Back alignment and domain information

>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion]	Back alignment and domain information

>COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits [Energy production and conversion]	Back alignment and domain information

>COG1013 PorB Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit [Energy production and conversion]	Back alignment and domain information

>COG1165 MenD 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [Coenzyme metabolism]	Back alignment and domain information

>COG0674 PorA Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [Energy production and conversion]	Back alignment and domain information

>TIGR03297 Ppyr-DeCO2ase phosphonopyruvate decarboxylase	Back alignment and domain information

>PF01855 POR_N: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; InterPro: IPR002880 This family includes the N-terminal region of the pyruvate ferredoxin oxidoreductase, corresponding to the first two structural domains	Back alignment and domain information

>PRK09193 indolepyruvate ferredoxin oxidoreductase; Validated	Back alignment and domain information

>PRK13030 2-oxoacid ferredoxin oxidoreductase; Provisional	Back alignment and domain information

>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins	Back alignment and domain information

>cd07034 TPP_PYR_PFOR_IOR-alpha_like Pyrimidine (PYR) binding domain of pyruvate ferredoxin oxidoreductase (PFOR), indolepyruvate ferredoxin oxidoreductase alpha subunit (IOR-alpha), and related proteins	Back alignment and domain information

>cd03377 TPP_PFOR_PNO Thiamine pyrophosphate (TPP family), PFOR_PNO subfamily, TPP-binding module; composed of proteins similar to the single subunit pyruvate ferredoxin oxidoreductase (PFOR) of Desulfovibrio Africanus, present in bacteria and amitochondriate eukaryotes	Back alignment and domain information

>PRK13029 2-oxoacid ferredoxin oxidoreductase; Provisional	Back alignment and domain information

>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor	Back alignment and domain information

>PRK13030 2-oxoacid ferredoxin oxidoreductase; Provisional	Back alignment and domain information

>TIGR02176 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric	Back alignment and domain information

>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit	Back alignment and domain information

>PRK09193 indolepyruvate ferredoxin oxidoreductase; Validated	Back alignment and domain information

>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins	Back alignment and domain information

>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX	Back alignment and domain information

>TIGR02418 acolac_catab acetolactate synthase, catabolic	Back alignment and domain information

>PRK07092 benzoylformate decarboxylase; Reviewed	Back alignment and domain information

>cd07033 TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins	Back alignment and domain information

>cd02018 TPP_PFOR Thiamine pyrophosphate (TPP family), Pyruvate ferredoxin/flavodoxin oxidoreductase (PFOR) subfamily, TPP-binding module; PFOR catalyzes the oxidative decarboxylation of pyruvate to form acetyl-CoA, a crucial step in many metabolic pathways	Back alignment and domain information

>cd01460 vWA_midasin VWA_Midasin: Midasin is a member of the AAA ATPase family	Back alignment and domain information

>PRK13029 2-oxoacid ferredoxin oxidoreductase; Provisional	Back alignment and domain information

>PRK07586 hypothetical protein; Validated	Back alignment and domain information

>PF09363 XFP_C: XFP C-terminal domain; InterPro: IPR018969 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria	Back alignment and domain information

>PRK05858 hypothetical protein; Provisional	Back alignment and domain information

>PRK07064 hypothetical protein; Provisional	Back alignment and domain information

>PRK06466 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK08199 thiamine pyrophosphate protein; Validated	Back alignment and domain information

>PRK08322 acetolactate synthase; Reviewed	Back alignment and domain information

>PRK08266 hypothetical protein; Provisional	Back alignment and domain information

>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type	Back alignment and domain information

>cd07036 TPP_PYR_E1-PDHc-beta_like Pyrimidine (PYR) binding domain of the beta subunits of the E1 components of human pyruvate dehydrogenase complex (E1- PDHc) and related proteins	Back alignment and domain information

>cd03376 TPP_PFOR_porB_like Thiamine pyrophosphate (TPP family), PFOR porB-like subfamily, TPP-binding module; composed of proteins similar to the beta subunit (porB) of the Helicobacter pylori four-subunit pyruvate ferredoxin oxidoreductase (PFOR), which are also found in archaea and some hyperthermophilic bacteria	Back alignment and domain information

>cd02014 TPP_POX Thiamine pyrophosphate (TPP) family, Pyruvate oxidase (POX) subfamily, TPP-binding module; composed of proteins similar to Lactobacillus plantarum POX, which plays a key role in controlling acetate production under aerobic conditions	Back alignment and domain information

>PRK06112 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>cd02004 TPP_BZL_OCoD_HPCL Thiamine pyrophosphate (TPP) family, BZL_OCoD_HPCL subfamily, TPP-binding module; composed of proteins similar to benzaldehyde lyase (BZL), oxalyl-CoA decarboxylase (OCoD) and 2-hydroxyphytanoyl-CoA lyase (2-HPCL)	Back alignment and domain information

>PRK07524 hypothetical protein; Provisional	Back alignment and domain information

>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins	Back alignment and domain information

>PRK08155 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>PRK06456 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK08617 acetolactate synthase; Reviewed	Back alignment and domain information

>TIGR01504 glyox_carbo_lig glyoxylate carboligase	Back alignment and domain information

>PRK11269 glyoxylate carboligase; Provisional	Back alignment and domain information

>cd02010 TPP_ALS Thiamine pyrophosphate (TPP) family, Acetolactate synthase (ALS) subfamily, TPP-binding module; composed of proteins similar to Klebsiella pneumoniae ALS, a catabolic enzyme required for butanediol fermentation	Back alignment and domain information

>PRK07979 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed	Back alignment and domain information

>cd02001 TPP_ComE_PpyrDC Thiamine pyrophosphate (TPP) family, ComE and PpyrDC subfamily, TPP-binding module; composed of proteins similar to sulfopyruvate decarboxylase beta subunit (ComE) and phosphonopyruvate decarboxylase (Ppyr decarboxylase)	Back alignment and domain information

>PRK06457 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>cd02009 TPP_SHCHC_synthase Thiamine pyrophosphate (TPP) family, SHCHC synthase subfamily, TPP-binding module; composed of proteins similar to Escherichia coli 2-succinyl-6-hydroxyl-2,4-cyclohexadiene-1-carboxylic acid (SHCHC) synthase (also called MenD)	Back alignment and domain information

>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family	Back alignment and domain information

>PRK07525 sulfoacetaldehyde acetyltransferase; Validated	Back alignment and domain information

>PRK07710 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK06276 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK11866 2-oxoacid ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>PRK07789 acetolactate synthase 1 catalytic subunit; Validated	Back alignment and domain information

>PRK08611 pyruvate oxidase; Provisional	Back alignment and domain information

>PRK09107 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK07282 acetolactate synthase catalytic subunit; Reviewed	Back alignment and domain information

>PRK08527 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>cd06586 TPP_enzyme_PYR Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes	Back alignment and domain information

>PRK06882 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK06965 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK11864 2-ketoisovalerate ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated	Back alignment and domain information

>TIGR03254 oxalate_oxc oxalyl-CoA decarboxylase	Back alignment and domain information

>PRK09124 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit	Back alignment and domain information

>PRK09259 putative oxalyl-CoA decarboxylase; Validated	Back alignment and domain information

>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase	Back alignment and domain information

>PLN02470 acetolactate synthase	Back alignment and domain information

>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed	Back alignment and domain information

>PRK06725 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>COG4032 Predicted thiamine-pyrophosphate-binding protein [General function prediction only]	Back alignment and domain information

>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed	Back alignment and domain information

>TIGR02720 pyruv_oxi_spxB pyruvate oxidase	Back alignment and domain information

>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase	Back alignment and domain information

>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor	Back alignment and domain information

>PRK08979 acetolactate synthase 3 catalytic subunit; Validated	Back alignment and domain information

>PRK08327 acetolactate synthase catalytic subunit; Validated	Back alignment and domain information

>PRK06546 pyruvate dehydrogenase; Provisional	Back alignment and domain information

>PRK11867 2-oxoglutarate ferredoxin oxidoreductase subunit beta; Reviewed	Back alignment and domain information

>PRK12474 hypothetical protein; Provisional	Back alignment and domain information

>PRK11865 pyruvate ferredoxin oxidoreductase subunit beta; Provisional	Back alignment and domain information

>cd02008 TPP_IOR_alpha Thiamine pyrophosphate (TPP) family, IOR-alpha subfamily, TPP-binding module; composed of proteins similar to indolepyruvate ferredoxin oxidoreductase (IOR) alpha subunit	Back alignment and domain information

>CHL00099 ilvB acetohydroxyacid synthase large subunit	Back alignment and domain information

>PF02779 Transket_pyr: Transketolase, pyrimidine binding domain; InterPro: IPR005475 Transketolase 2	Back alignment and domain information

>PLN02683 pyruvate dehydrogenase E1 component subunit beta	Back alignment and domain information

>cd02015 TPP_AHAS Thiamine pyrophosphate (TPP) family, Acetohydroxyacid synthase (AHAS) subfamily, TPP-binding module; composed of proteins similar to the large catalytic subunit of AHAS	Back alignment and domain information

>cd02003 TPP_IolD Thiamine pyrophosphate (TPP) family, IolD subfamily, TPP-binding module; composed of proteins similar to Rhizobium leguminosarum bv	Back alignment and domain information

>cd02013 TPP_Xsc_like Thiamine pyrophosphate (TPP) family, Xsc-like subfamily, TPP-binding module; composed of proteins similar to Alcaligenes defragrans sulfoacetaldehyde acetyltransferase (Xsc)	Back alignment and domain information

>cd00568 TPP_enzymes Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor	Back alignment and domain information

>cd03375 TPP_OGFOR Thiamine pyrophosphate (TPP family), 2-oxoglutarate ferredoxin oxidoreductase (OGFOR) subfamily, TPP-binding module; OGFOR catalyzes the oxidative decarboxylation of 2-oxo-acids, with ferredoxin acting as an electron acceptor	Back alignment and domain information

>PRK08273 thiamine pyrophosphate protein; Provisional	Back alignment and domain information

>PF02775 TPP_enzyme_C: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; InterPro: IPR011766 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor	Back alignment and domain information

>cd02006 TPP_Gcl Thiamine pyrophosphate (TPP) family, Gcl subfamily, TPP-binding module; composed of proteins similar to Escherichia coli glyoxylate carboligase (Gcl)	Back alignment and domain information

>PLN02573 pyruvate decarboxylase	Back alignment and domain information

>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins	Back alignment and domain information

>TIGR00204 dxs 1-deoxy-D-xylulose-5-phosphate synthase	Back alignment and domain information

>smart00861 Transket_pyr Transketolase, pyrimidine binding domain	Back alignment and domain information

>PRK05899 transketolase; Reviewed	Back alignment and domain information

>cd02012 TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates	Back alignment and domain information

>PRK11892 pyruvate dehydrogenase subunit beta; Provisional	Back alignment and domain information

>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding	Back alignment and domain information

>PRK12571 1-deoxy-D-xylulose-5-phosphate synthase; Provisional	Back alignment and domain information

Homologous Structure Templates