Citrus Sinensis ID: 005402

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------70
MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEESTDVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP
ccccccHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHcccccccccccccccHHHHHHHHHcccccccccccccccccccEEEccccEEcccccccccccccEEcccccEEEEEEcEEEEEcccccEEEEcccEEEEEEcccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccHHHHccHHHHHHHccHHHHHHHHHHHccccccccccccccEEEccccccccHHHHHHHHHHHcccccHHHHHHHHccccccccccccccccccccHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccHHHHHHHccccccccccHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccccccccccccccccHHHHHHcccccccccHHHHHHHcHHHHHccccHHHHHHHHHccccEEEccccHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccccHHHHHHcccccccccccEEEEccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccccccc
ccEEEEccHHHHHHHcccHHHHHHHHHHccccHHHHHHHcccEEEcccHHHHHHHHHHHHHHHccccEEEEEEcccEcccEEEEEccEEEEEccEcccccccccEEcHHHcEEEEEccEEEEcccccEEEccccEEEEEEcccccccccccccccEEEEEcccccccccHHHHHcccccHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHEEEEEEccccccHHHHHHHHHHHcccccHHHHHHHHcccEEEEcccccHHHccEEEHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHccccccccccccEEEEEEcccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEccccHHHHHHHHHHccEEEEccccccccccHHHHHHHHHccEEEEccccHHHHHHHHHcHHHcEEccccHHHHHHHcccccccHccccHHHHHHHHHHHccccccccccHcHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccHHHEHHHHHHHHHHHcccccccccc
MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVvsqepdaalgngglgrlascfldsmatlnypawgyglrykyglfkqritKDGQEEVAEDWLelgnpweierndvsypvkfygkivpgsdgkshwiggedikavaydipipgyktkttinlrlwstmvpsedfdlsafnagdHTKAAEALTNAEKICYIlypgdesvegKVLRLKQQYTLCSASLQDIIARFEkrsganvnweeFPEKVAVQMndthptlciPELIRILIDLKGLSWKEAWNITQRTVaytnhtvlpEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSeygtadpdLLEKRLKETRilenvdlpatFADLFVKtkestdvvpddelencdeeggpvdeelesaqedgvleeeSTDVVSFIKektgysvspdaMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVErkakfvprvcifggkaFATYVQAKRIVKFITdvgatvnhdpeigDLLKVIFVPDYNVSVAELLIPASELSQHIstagmeasgtsnmkFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRkersegkfvpdaRFEEVKKFVKSgvfgsynydelmgslegnegfgqadyflvgkdfpsyleCQEKVDEAYCDQKRWTRMSIMntagsskfssdRTIQEYARDIWNIIPVELP
MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWlelgnpweierndVSYPVKFYGKivpgsdgkshWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETrilenvdlpatFADLFVKTKestdvvpddelencdeeggpvDEELEsaqedgvleeesTDVVSFIkektgysvspdaMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLrkersegkfvpdarfeeVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSImntagsskfssdrtIQEYARDIwniipvelp
MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDaalgngglgrlaSCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEESTDVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP
*****GRALLNAIGNLGLTGAYAEALSKLGQSLENVV****DAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKT*****************************************VVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHI***********NMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKE**EGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTA********RTIQEYARDIWNIIPV***
MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEESTDVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL*
MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEESTDVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAG********TIQEYARDIWNIIPVELP
MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEESTDVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL*
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iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDEEGGPVDEELESAQEDGVLEEESTDVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query698 2.2.26 [Sep-21-2011]
Q9LKJ3832 Alpha-glucan phosphorylas N/A no 0.989 0.830 0.565 0.0
P53536 1003 Alpha-1,4 glucan phosphor N/A no 0.528 0.367 0.845 0.0
P27598 955 Alpha-1,4 glucan phosphor N/A no 0.580 0.424 0.789 0.0
Q9LIB2 962 Alpha-glucan phosphorylas yes no 0.518 0.376 0.842 0.0
P04045 966 Alpha-1,4 glucan phosphor N/A no 0.527 0.380 0.826 0.0
P53535 974 Alpha-1,4 glucan phosphor N/A no 0.560 0.401 0.758 1e-180
Q00766853 Glycogen phosphorylase 1 yes no 0.974 0.797 0.432 1e-167
P06737847 Glycogen phosphorylase, l yes no 0.984 0.811 0.432 1e-153
P0AC87815 Glycogen phosphorylase OS yes no 0.974 0.834 0.417 1e-152
P0AC86815 Glycogen phosphorylase OS N/A no 0.974 0.834 0.417 1e-152
>sp|Q9LKJ3|PHSH_WHEAT Alpha-glucan phosphorylase, H isozyme OS=Triticum aestivum PE=2 SV=1 Back     alignment and function desciption
 Score =  871 bits (2250), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/759 (56%), Positives = 538/759 (70%), Gaps = 68/759 (8%)

Query: 1   MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDS 60
           ME+LQGRAL NA+GNL +TGAYA+AL K G  LE +  QE DAALGNGGLGRLASCFLDS
Sbjct: 81  MEYLQGRALTNAVGNLAITGAYADALKKFGYELEAIAGQERDAALGNGGLGRLASCFLDS 140

Query: 61  MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKI 120
           MATLN P+WGYGLRY+YGLFKQRI K+GQEE+AEDWL+  +PWEI R+DV YP++F+G +
Sbjct: 141 MATLNLPSWGYGLRYRYGLFKQRIAKEGQEEIAEDWLDKFSPWEIVRHDVVYPIRFFGHV 200

Query: 121 VPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTK 180
               DGK  W GGE + A+AYD+PIPGYKTK  I+LRLW     +EDF+L  FN G +  
Sbjct: 201 EISPDGKRKWAGGEVLNALAYDVPIPGYKTKNAISLRLWDATATAEDFNLFQFNDGQYES 260

Query: 181 AAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVN--WE 238
           AA+  + A++IC +LYPGD + EGK+LRLKQQY LCSASLQDII RF++R    V+  W 
Sbjct: 261 AAQLHSRAQQICAVLYPGDATEEGKLLRLKQQYFLCSASLQDIIFRFKERKADRVSGKWS 320

Query: 239 EFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKW 298
           EFP KVAVQMNDTHPTL IPEL+R+L+D++GL W EAW +T +TVAYTNHTVLPEALEKW
Sbjct: 321 EFPSKVAVQMNDTHPTLAIPELMRLLMDVEGLGWDEAWAVTNKTVAYTNHTVLPEALEKW 380

Query: 299 SFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILE-NVDLPAT-- 355
           S  +M+KLLPRHMEIIE ID+     ++S         +E +++  R+L+ N + P    
Sbjct: 381 SQAVMKKLLPRHMEIIEEIDKRFREMVISTRKD-----MEGKIESMRVLDNNPEKPVVRM 435

Query: 356 --------------------------FADLFV----KTKESTD-VVPDDELENCDEEGGP 384
                                     FAD       K +  T+ + P   L  C+ E   
Sbjct: 436 ANLCVVAGHTVNGVAELHSNILKQELFADYVSIWPNKFQNKTNGITPRRWLRFCNPELSE 495

Query: 385 V-------------------------DEELESAQEDGVLEEESTDVVSFIKEKTGYSVSP 419
           +                         DE+L +      L  +   +   + + TG ++ P
Sbjct: 496 IVTKWLKTDQWTSNLDLLTGLRKFADDEKLHAEWAAAKLASKKR-LAKHVLDVTGVTIDP 554

Query: 420 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQ 479
           D++FDIQ+KRIHEYKRQLMNILG VYRYKK+KEMSA +R+ K  PR  + GGKAFATY  
Sbjct: 555 DSLFDIQIKRIHEYKRQLMNILGAVYRYKKLKEMSAADRQ-KVTPRTVMVGGKAFATYTN 613

Query: 480 AKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASG 539
           AKRIVK + DVGA VN+D ++   LKV+F+P+YNVSVAE+LIP SELSQHISTAGMEASG
Sbjct: 614 AKRIVKLVNDVGAVVNNDADVNKYLKVVFIPNYNVSVAEVLIPGSELSQHISTAGMEASG 673

Query: 540 TSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDAR 599
           TSNMKF++NGC++IGTLDGANVEIR+EVG++NFFLFGA+A ++AGLRK+R  G F PD R
Sbjct: 674 TSNMKFSLNGCVIIGTLDGANVEIREEVGQDNFFLFGAKADQVAGLRKDRENGLFKPDPR 733

Query: 600 FEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQ 659
           FEE K+F++SG FG+Y+Y  L+ SLEGN GFG+ DYFLVG DFPSY++ Q +VDEAY D+
Sbjct: 734 FEEAKQFIRSGAFGTYDYTPLLDSLEGNTGFGRGDYFLVGYDFPSYIDAQARVDEAYKDK 793

Query: 660 KRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 698
           K+W +MSI+NTAGS KFSSDRTI +YA++IW I    +P
Sbjct: 794 KKWVKMSILNTAGSGKFSSDRTIDQYAKEIWGISACPVP 832
Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
Triticum aestivum (taxid: 4565)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1
>sp|P53536|PHSL_VICFA Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Vicia faba GN=PHO1 PE=2 SV=2 Back     alignment and function description
>sp|P27598|PHSL_IPOBA Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic OS=Ipomoea batatas PE=2 SV=1 Back     alignment and function description
>sp|Q9LIB2|PHS1_ARATH Alpha-glucan phosphorylase 1 OS=Arabidopsis thaliana GN=PHS1 PE=1 SV=1 Back     alignment and function description
>sp|P04045|PHSL1_SOLTU Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum PE=1 SV=2 Back     alignment and function description
>sp|P53535|PHSL2_SOLTU Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic OS=Solanum tuberosum GN=STP-1 PE=1 SV=1 Back     alignment and function description
>sp|Q00766|PHS1_DICDI Glycogen phosphorylase 1 OS=Dictyostelium discoideum GN=glpV PE=1 SV=3 Back     alignment and function description
>sp|P06737|PYGL_HUMAN Glycogen phosphorylase, liver form OS=Homo sapiens GN=PYGL PE=1 SV=4 Back     alignment and function description
>sp|P0AC87|PHSG_SHIFL Glycogen phosphorylase OS=Shigella flexneri GN=glgP PE=3 SV=1 Back     alignment and function description
>sp|P0AC86|PHSG_ECOLI Glycogen phosphorylase OS=Escherichia coli (strain K12) GN=glgP PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query698
224104329 853 predicted protein [Populus trichocarpa] 0.991 0.811 0.580 0.0
21063929 840 starch phosphorylase type H [Citrus hybr 0.979 0.814 0.573 0.0
14916632 832 RecName: Full=Alpha-glucan phosphorylase 0.989 0.830 0.565 0.0
300681423 832 alpha-glucan phosphorylase, H isozyme,ex 0.989 0.830 0.566 0.0
302756841 833 hypothetical protein SELMODRAFT_164611 [ 0.989 0.829 0.571 0.0
356527232 846 PREDICTED: alpha-glucan phosphorylase, H 0.991 0.817 0.575 0.0
300681424 832 alpha-glucan phosphorylase, H isozyme,ex 0.989 0.830 0.565 0.0
357125890 833 PREDICTED: alpha-glucan phosphorylase, H 0.989 0.829 0.565 0.0
115441087 841 Os01g0851700 [Oryza sativa Japonica Grou 0.981 0.814 0.566 0.0
218189392 841 hypothetical protein OsI_04460 [Oryza sa 0.981 0.814 0.566 0.0
>gi|224104329|ref|XP_002313399.1| predicted protein [Populus trichocarpa] gi|222849807|gb|EEE87354.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  880 bits (2274), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/758 (58%), Positives = 541/758 (71%), Gaps = 66/758 (8%)

Query: 1   MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDS 60
           ME+LQGRAL NAIGNL +  AY EAL++LG  LE++V QE DAALGNGGLGRLASCFLDS
Sbjct: 102 MEYLQGRALTNAIGNLDIQDAYGEALNQLGHQLEDIVEQEKDAALGNGGLGRLASCFLDS 161

Query: 61  MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKI 120
           MATLN PAWGYGLRY+YGLFKQRITK+GQEE+AEDWLE  +PWEI R+DV +PV+F+G +
Sbjct: 162 MATLNLPAWGYGLRYRYGLFKQRITKEGQEEIAEDWLEKFSPWEIVRHDVVFPVRFFGHV 221

Query: 121 VPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTK 180
               DG   W+GG+ ++A+AYD+PIPGYKTK TI+LRLW     S+DF+L  FN G +  
Sbjct: 222 EVNPDGSRKWVGGDIVQALAYDVPIPGYKTKNTISLRLWEARASSDDFNLFLFNDGQYES 281

Query: 181 AAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGAN--VNWE 238
           A++  + A++IC +LYPGD +  GK+LRLKQQ+ LCSASLQDII RF++R   N   NW 
Sbjct: 282 ASQLHSRAQQICAVLYPGDATENGKLLRLKQQFFLCSASLQDIILRFKERKNENGSWNWS 341

Query: 239 EFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKW 298
           EF  KVAVQ+NDTHPTL IPEL+R+L+D +GL W EAW++T RTVAYTNHTVLPEALEKW
Sbjct: 342 EFSSKVAVQLNDTHPTLAIPELMRLLLDNEGLGWDEAWDVTTRTVAYTNHTVLPEALEKW 401

Query: 299 SFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILEN--------- 349
           S  +M KLLPRHMEIIE ID+  +  I     T  PD LE +L    IL+N         
Sbjct: 402 SQSVMWKLLPRHMEIIEEIDKRFITMI----RTTRPD-LESKLPSMCILDNNPQKPVVRM 456

Query: 350 -----------------------VDLPATFADLFVK--TKESTDVVPDDELENCDEE-GG 383
                                   +L A +  ++ K    ++  + P   L  C  E   
Sbjct: 457 ANLCVVSSHKVNGVAQLHSDILKAELFADYVSIWPKKFQNKTNGITPRRWLRFCSPELSN 516

Query: 384 PVDEELESAQ---------------EDGVLEEESTD--------VVSFIKEKTGYSVSPD 420
            + + L++ Q               E+  L+ E +         +  +I  +TG S+ P+
Sbjct: 517 IITKWLKTDQWVTNLDLLVGLREFAENADLQAEWSSAKMANKQRLAQYILRETGVSIDPN 576

Query: 421 AMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQA 480
           ++FDIQVKRIHEYKRQLMNILG +YRYKK+KEMS  ERK K  PR  +FGGKAFATY  A
Sbjct: 577 SLFDIQVKRIHEYKRQLMNILGAIYRYKKLKEMSTEERK-KTTPRTIMFGGKAFATYTNA 635

Query: 481 KRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGT 540
           KRIVK + DVG  VN DPE+   LKV+FVP+YNVSVAE+LIP SELSQHISTAGMEASGT
Sbjct: 636 KRIVKLVNDVGTVVNTDPEVNSYLKVVFVPNYNVSVAEMLIPGSELSQHISTAGMEASGT 695

Query: 541 SNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARF 600
           SNMKFA+NGC++IGTLDGANVEIR+E+GEENFFLFGA A E+  LRKER  G F PD RF
Sbjct: 696 SNMKFALNGCLIIGTLDGANVEIREEIGEENFFLFGATADEVPRLRKERENGLFKPDPRF 755

Query: 601 EEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQK 660
           EE K +++SG FGSY+Y+ L+ SLEGN G+G+ DYFLVG DFPSY++ QE+VDEAY D+K
Sbjct: 756 EEAKMYIRSGAFGSYDYNPLLESLEGNSGYGRGDYFLVGHDFPSYMDAQERVDEAYKDRK 815

Query: 661 RWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 698
           RW RMSI++TAGS KFSSDRTI +YA++IWNI    +P
Sbjct: 816 RWLRMSILSTAGSGKFSSDRTISQYAKEIWNIEECRVP 853

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|21063929|gb|AAM29154.1| starch phosphorylase type H [Citrus hybrid cultivar] Back     alignment and taxonomy information
>gi|14916632|sp|Q9LKJ3.1|PHSH_WHEAT RecName: Full=Alpha-glucan phosphorylase, H isozyme; AltName: Full=Starch phosphorylase H gi|9082278|gb|AAF82787.1|AF275551_1 alpha 1,4-glucan phosphorylase [Triticum aestivum] Back     alignment and taxonomy information
>gi|300681423|emb|CBH32515.1| alpha-glucan phosphorylase, H isozyme,expressed [Triticum aestivum] Back     alignment and taxonomy information
>gi|302756841|ref|XP_002961844.1| hypothetical protein SELMODRAFT_164611 [Selaginella moellendorffii] gi|300170503|gb|EFJ37104.1| hypothetical protein SELMODRAFT_164611 [Selaginella moellendorffii] Back     alignment and taxonomy information
>gi|356527232|ref|XP_003532216.1| PREDICTED: alpha-glucan phosphorylase, H isozyme-like [Glycine max] Back     alignment and taxonomy information
>gi|300681424|emb|CBH32516.1| alpha-glucan phosphorylase, H isozyme,expressed [Triticum aestivum] Back     alignment and taxonomy information
>gi|357125890|ref|XP_003564622.1| PREDICTED: alpha-glucan phosphorylase, H isozyme-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|115441087|ref|NP_001044823.1| Os01g0851700 [Oryza sativa Japonica Group] gi|20805185|dbj|BAB92854.1| putative alpha 1,4-glucan phosphorylase H isozyme [Oryza sativa Japonica Group] gi|113534354|dbj|BAF06737.1| Os01g0851700 [Oryza sativa Japonica Group] gi|125572653|gb|EAZ14168.1| hypothetical protein OsJ_04098 [Oryza sativa Japonica Group] gi|215737114|dbj|BAG96043.1| unnamed protein product [Oryza sativa Japonica Group] gi|215740575|dbj|BAG97231.1| unnamed protein product [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|218189392|gb|EEC71819.1| hypothetical protein OsI_04460 [Oryza sativa Indica Group] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query698
UNIPROTKB|P04045 966 P04045 "Alpha-1,4 glucan phosp 0.594 0.429 0.716 1.7e-304
TAIR|locus:2093787 962 PHS1 "alpha-glucan phosphoryla 0.581 0.422 0.735 3.6e-304
UNIPROTKB|P53535 974 STP-1 "Alpha-1,4 glucan phosph 0.580 0.415 0.714 1.1e-300
TAIR|locus:2075576841 PHS2 "alpha-glucan phosphoryla 0.445 0.369 0.667 8.3e-223
ASPGD|ASPL0000059322879 AN1015 [Emericella nidulans (t 0.478 0.379 0.504 5.7e-165
UNIPROTKB|G4MW66888 MGG_01819 "Phosphorylase" [Mag 0.478 0.376 0.497 2.2e-163
DICTYBASE|DDB_G0281383853 glpV "glycogen phosphorylase b 0.465 0.381 0.503 3.6e-161
DICTYBASE|DDB_G0291123 993 glpD "glycogen phosphorylase a 0.489 0.344 0.478 2.3e-159
CGD|CAL0001970900 GPH1 [Candida albicans (taxid: 0.479 0.372 0.482 9.1e-154
UNIPROTKB|Q5AFP7900 GPH1 "Phosphorylase" [Candida 0.479 0.372 0.482 9.1e-154
UNIPROTKB|P04045 P04045 "Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic" [Solanum tuberosum (taxid:4113)] Back     alignment and assigned GO terms
 Score = 1574 (559.1 bits), Expect = 1.7e-304, Sum P(2) = 1.7e-304
 Identities = 304/424 (71%), Positives = 347/424 (81%)

Query:     1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDS 60
             MEFLQGRALLNAIGNL LTGA+AEAL  LG +LENV SQEPD            SCFLDS
Sbjct:   139 MEFLQGRALLNAIGNLELTGAFAEALKNLGHNLENVASQEPDAALGNGGLGRLASCFLDS 198

Query:    61 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKI 120
             +ATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLE+G+PWE+ RNDVSYP+KFYGK+
Sbjct:   199 LATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLEIGSPWEVVRNDVSYPIKFYGKV 258

Query:   121 VPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTK 180
               GSDGK +WIGGEDIKAVAYD+PIPGYKT+TTI+LRLWST VPS DFDLSAFNAG+HTK
Sbjct:   259 STGSDGKRYWIGGEDIKAVAYDVPIPGYKTRTTISLRLWSTQVPSADFDLSAFNAGEHTK 318

Query:   181 AAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNWEEF 240
             A EA  NAEKICYILYPGDES EGK+LRLKQQYTLCSASLQDII+RFE+RSG  + WEEF
Sbjct:   319 ACEAQANAEKICYILYPGDESEEGKILRLKQQYTLCSASLQDIISRFERRSGDRIKWEEF 378

Query:   241 PEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSF 300
             PEKVAVQMNDTHPTLCIPEL+RILIDLKGL+W EAWNITQRTVAYTNHTVLPEALEKWS+
Sbjct:   379 PEKVAVQMNDTHPTLCIPELMRILIDLKGLNWNEAWNITQRTVAYTNHTVLPEALEKWSY 438

Query:   301 ELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLF 360
             ELMQKLLPRH+EIIE IDEELVH IV +YG+ D + LE++L   RILEN DLP++ A+LF
Sbjct:   439 ELMQKLLPRHVEIIEAIDEELVHEIVLKYGSMDLNKLEEKLTTMRILENFDLPSSVAELF 498

Query:   361 VKTKESTD-----VVPDDELENCDEEGGPVDEELESAQEDGVLEEESTDVVSFIKEKTGY 415
             +K + S D     V   D++E  D+     ++E ++ ++  V  E + +    I +KT  
Sbjct:   499 IKPEISVDDDTETVEVHDKVEASDKV--VTNDEDDTGKKTSVKIEAAAE--KDIDKKTPV 554

Query:   416 SVSP 419
             S  P
Sbjct:   555 SPEP 558
GO:0005515 "protein binding" evidence=IPI
GO:0042802 "identical protein binding" evidence=IPI
TAIR|locus:2093787 PHS1 "alpha-glucan phosphorylase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|P53535 STP-1 "Alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic" [Solanum tuberosum (taxid:4113)] Back     alignment and assigned GO terms
TAIR|locus:2075576 PHS2 "alpha-glucan phosphorylase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
ASPGD|ASPL0000059322 AN1015 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
UNIPROTKB|G4MW66 MGG_01819 "Phosphorylase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0281383 glpV "glycogen phosphorylase b" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0291123 glpD "glycogen phosphorylase a" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
CGD|CAL0001970 GPH1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms
UNIPROTKB|Q5AFP7 GPH1 "Phosphorylase" [Candida albicans SC5314 (taxid:237561)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9PKE6PHSG_CHLMU2, ., 4, ., 1, ., 10.40070.96410.8277yesno
Q9ET01PYGL_MOUSE2, ., 4, ., 1, ., 10.42250.97560.8011yesno
P29849PHSM_STRPN2, ., 4, ., 1, ., 10.34350.91400.8484yesno
P06737PYGL_HUMAN2, ., 4, ., 1, ., 10.43250.98420.8110yesno
P0AC87PHSG_SHIFL2, ., 4, ., 1, ., 10.41790.97420.8343yesno
P79334PYGM_BOVIN2, ., 4, ., 1, ., 10.41640.97850.8111yesno
Q9LKJ3PHSH_WHEAT2, ., 4, ., 1, ., 10.56520.98990.8305N/Ano
Q9LIB2PHS1_ARATH2, ., 4, ., 1, ., 10.84250.51860.3762yesno
O84250PHSG_CHLTR2, ., 4, ., 1, ., 10.40290.96990.8316yesno
P45180PHSG_HAEIN2, ., 4, ., 1, ., 10.39860.97420.8282yesno
P09811PYGL_RAT2, ., 4, ., 1, ., 10.41990.97560.8011yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.976
4th Layer2.4.1.10.991

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00021049001
RecName- Full=Phosphorylase; EC=2.4.1.1;; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (By similarity) (760 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00015571001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (755 aa)
•  • •• 0.957
GSVIVG00017037001
SubName- Full=Chromosome chr11 scaffold_14, whole genome shotgun sequence; (501 aa)
•    •• 0.945
GSVIVG00037251001
SubName- Full=Chromosome chr16 scaffold_86, whole genome shotgun sequence; (552 aa)
•    •• 0.943
GSVIVG00020983001
SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (507 aa)
•    •• 0.943
GSVIVG00028257001
RecName- Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27;; This protein plays a role [...] (445 aa)
•    •• 0.940
GSVIVG00029046001
RecName- Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27;; This protein plays a role [...] (509 aa)
•    •• 0.935
GSVIVG00010600001
SubName- Full=Chromosome chr16 scaffold_271, whole genome shotgun sequence; (621 aa)
•  • •• 0.935
GSVIVG00030550001
SubName- Full=Chromosome chr1 scaffold_5, whole genome shotgun sequence; (581 aa)
•  • •• 0.933
GSVIVG00014579001
RecName- Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27;; This protein plays a role [...] (519 aa)
•    •• 0.930
GSVIVG00019926001
RecName- Full=Glucose-1-phosphate adenylyltransferase; EC=2.7.7.27;; This protein plays a role [...] (520 aa)
•    •• 0.930

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query698
TIGR02093794 TIGR02093, P_ylase, glycogen/starch/alpha-glucan p 0.0
cd04300797 cd04300, GT1_Glycogen_Phosphorylase, This is a fam 0.0
pfam00343712 pfam00343, Phosphorylase, Carbohydrate phosphoryla 1e-156
cd04300797 cd04300, GT1_Glycogen_Phosphorylase, This is a fam 1e-153
pfam00343712 pfam00343, Phosphorylase, Carbohydrate phosphoryla 1e-143
PRK14985798 PRK14985, PRK14985, maltodextrin phosphorylase; Pr 1e-105
PRK14986815 PRK14986, PRK14986, glycogen phosphorylase; Provis 1e-104
COG0058750 COG0058, GlgP, Glucan phosphorylase [Carbohydrate 1e-101
PRK14986815 PRK14986, PRK14986, glycogen phosphorylase; Provis 1e-98
COG0058750 COG0058, GlgP, Glucan phosphorylase [Carbohydrate 1e-93
PRK14985798 PRK14985, PRK14985, maltodextrin phosphorylase; Pr 6e-92
TIGR02094601 TIGR02094, more_P_ylases, alpha-glucan phosphoryla 3e-13
TIGR02094601 TIGR02094, more_P_ylases, alpha-glucan phosphoryla 2e-09
cd04299778 cd04299, GT1_Glycogen_Phosphorylase_like, This fam 4e-09
cd04299778 cd04299, GT1_Glycogen_Phosphorylase_like, This fam 4e-08
>gnl|CDD|233722 TIGR02093, P_ylase, glycogen/starch/alpha-glucan phosphorylases Back     alignment and domain information 
 Score =  836 bits (2162), Expect = 0.0
 Identities = 341/765 (44%), Positives = 441/765 (57%), Gaps = 100/765 (13%)

Query: 1   MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDS 60
            EFL GR L N + NLGL     EAL +LG  LE ++  E DA LGNGGLGRLA+CFLDS
Sbjct: 57  AEFLMGRLLGNNLLNLGLYDEVKEALRELGLDLEEILEIENDAGLGNGGLGRLAACFLDS 116

Query: 61  MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKI 120
           +ATL  PA GYG+RY+YGLFKQ+I    Q E+ +DWL  GNPWEI R D SY V+F G++
Sbjct: 117 LATLGLPATGYGIRYEYGLFKQKIVDGWQVELPDDWLRYGNPWEIRRPDRSYEVRFGGRV 176

Query: 121 VPGSDGKSH---WIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGD 177
               D       W+  E + A+ YD+P+PGY+T T   LRLWS     E+FDL AFNAGD
Sbjct: 177 ELQPDSDRLRPRWVPAETVLAIPYDVPVPGYRTDTVNTLRLWSAE-APEEFDLDAFNAGD 235

Query: 178 HTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANVNW 237
           + +A E    AE I  +LYP D + EGK LRLKQQY   SASLQDII R  +      + 
Sbjct: 236 YYEAVEEKNRAENISRVLYPNDSTYEGKELRLKQQYFFVSASLQDIIRRHLETHP---DL 292

Query: 238 EEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHT-------- 289
            +FP+KVA+Q+NDTHP L IPEL+R+LID +G+ W EAW+IT +T AYTNHT        
Sbjct: 293 SDFPKKVAIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEK 352

Query: 290 --------VLPEALE-------KWSFELMQKL-----LPRHMEIIEMIDEELVH----TI 325
                   +LP  LE       ++  EL  K        R M IIE    + V      I
Sbjct: 353 WPVDLFQKLLPRHLEIIYEINRRFLAELAAKGPGDEAKIRRMSIIEEGQSKRVRMANLAI 412

Query: 326 VSEY---GTADPDLLEKRLKETRILENVDLPATFADLFV-----KT-------------K 364
           V  +   G A        L  T +L+   L   F +L+      KT              
Sbjct: 413 VGSHSVNGVA-------AL-HTELLKEDLLKD-FYELYPEKFNNKTNGITPRRWLRLANP 463

Query: 365 ESTDVVP----DDELENCDEEGGPVDEELESAQEDGVLEEESTDV--------VSFIKEK 412
             + ++     DD L + D       ++LE   +D    EE   V         ++IKE 
Sbjct: 464 GLSALLTETIGDDWLTDLDLL-----KKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEH 518

Query: 413 TGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGK 472
           TG  V P+++FD+QVKR+HEYKRQL+N+L ++Y Y ++KE          VPR  IFGGK
Sbjct: 519 TGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPP----KDIVPRTVIFGGK 574

Query: 473 AFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIST 532
           A   Y  AK I+K I  V   VN+DP +GD LKV+FVP+YNVS+AEL+IPA++LS+ IST
Sbjct: 575 AAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQIST 634

Query: 533 AGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKE--RS 590
           AG EASGT NMKF +NG + IGTLDGANVEIR+EVG EN F+FG    E+  LR++    
Sbjct: 635 AGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFGLTVEEVEALREKGYNP 694

Query: 591 EGKFVPDARFEEVKKFVKSGVFGSYN---YDELMGSLEGNEGFGQADYFLVGKDFPSYLE 647
              +  D   + V   + SG F   +   +  L  SL  +      D F V  DF +Y++
Sbjct: 695 REYYEADPELKRVLDLISSGTFSPGDPGLFRPLYDSLLNHG-----DPFFVLADFAAYVD 749

Query: 648 CQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 692
            QE+VD  Y DQ  WT+ SI+N A S KFSSDRTI+EYA++IW++
Sbjct: 750 AQERVDALYRDQLEWTKKSILNIANSGKFSSDRTIREYAKEIWHV 794

This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 794
>gnl|CDD|99996 cd04300, GT1_Glycogen_Phosphorylase, This is a family of oligosaccharide phosphorylases Back     alignment and domain information
>gnl|CDD|215868 pfam00343, Phosphorylase, Carbohydrate phosphorylase Back     alignment and domain information
>gnl|CDD|99996 cd04300, GT1_Glycogen_Phosphorylase, This is a family of oligosaccharide phosphorylases Back     alignment and domain information
>gnl|CDD|215868 pfam00343, Phosphorylase, Carbohydrate phosphorylase Back     alignment and domain information
>gnl|CDD|237881 PRK14985, PRK14985, maltodextrin phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|184948 PRK14986, PRK14986, glycogen phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|223136 COG0058, GlgP, Glucan phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|184948 PRK14986, PRK14986, glycogen phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|223136 COG0058, GlgP, Glucan phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|237881 PRK14985, PRK14985, maltodextrin phosphorylase; Provisional Back     alignment and domain information
>gnl|CDD|233723 TIGR02094, more_P_ylases, alpha-glucan phosphorylases Back     alignment and domain information
>gnl|CDD|233723 TIGR02094, more_P_ylases, alpha-glucan phosphorylases Back     alignment and domain information
>gnl|CDD|99995 cd04299, GT1_Glycogen_Phosphorylase_like, This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences Back     alignment and domain information
>gnl|CDD|99995 cd04299, GT1_Glycogen_Phosphorylase_like, This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 698
KOG2099843 consensus Glycogen phosphorylase [Carbohydrate tra 100.0
PRK14985798 maltodextrin phosphorylase; Provisional 100.0
TIGR02093794 P_ylase glycogen/starch/alpha-glucan phosphorylase 100.0
PRK14986815 glycogen phosphorylase; Provisional 100.0
cd04300797 GT1_Glycogen_Phosphorylase This is a family of oli 100.0
PF00343713 Phosphorylase: Carbohydrate phosphorylase; InterPr 100.0
COG0058750 GlgP Glucan phosphorylase [Carbohydrate transport 100.0
cd04299778 GT1_Glycogen_Phosphorylase_like This family is mos 100.0
TIGR02094601 more_P_ylases alpha-glucan phosphorylases. This fa 100.0
COG0297487 GlgA Glycogen synthase [Carbohydrate transport and 99.97
cd03791476 GT1_Glycogen_synthase_DULL1_like This family is mo 99.96
PRK14098489 glycogen synthase; Provisional 99.96
TIGR02095473 glgA glycogen/starch synthases, ADP-glucose type. 99.96
PLN02939977 transferase, transferring glycosyl groups 99.95
PRK00654466 glgA glycogen synthase; Provisional 99.94
PLN023161036 synthase/transferase 99.94
PRK14099485 glycogen synthase; Provisional 99.93
TIGR02470784 sucr_synth sucrose synthase. This model represents 99.46
PLN00142815 sucrose synthase 99.34
cd03792372 GT1_Trehalose_phosphorylase Trehalose phosphorylas 99.14
TIGR02149388 glgA_Coryne glycogen synthase, Corynebacterium fam 99.13
TIGR03449405 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino 99.11
PHA01633335 putative glycosyl transferase group 1 99.03
cd03821375 GT1_Bme6_like This family is most closely related 99.0
TIGR02472439 sucr_P_syn_N sucrose-phosphate synthase, putative, 98.99
TIGR02468 1050 sucrsPsyn_pln sucrose phosphate synthase/possible 98.95
cd03805392 GT1_ALG2_like This family is most closely related 98.94
PRK15484380 lipopolysaccharide 1,2-N-acetylglucosaminetransfer 98.92
cd03800398 GT1_Sucrose_synthase This family is most closely r 98.92
cd03813475 GT1_like_3 This family is most closely related to 98.89
cd03796398 GT1_PIG-A_like This family is most closely related 98.89
cd03793590 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, 98.89
cd03818396 GT1_ExpC_like This family is most closely related 98.86
cd03788460 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a 98.85
cd03822366 GT1_ecORF704_like This family is most closely rela 98.85
cd03809365 GT1_mtfB_like This family is most closely related 98.84
TIGR03088374 stp2 sugar transferase, PEP-CTERM/EpsH1 system ass 98.83
PRK15427406 colanic acid biosynthesis glycosyltransferase WcaL 98.82
cd04962371 GT1_like_5 This family is most closely related to 98.8
cd03808359 GT1_cap1E_like This family is most closely related 98.8
cd03807365 GT1_WbnK_like This family is most closely related 98.77
PRK15490578 Vi polysaccharide biosynthesis protein TviE; Provi 98.74
cd03795357 GT1_like_4 This family is most closely related to 98.73
PF00534172 Glycos_transf_1: Glycosyl transferases group 1; In 98.69
TIGR02400456 trehalose_OtsA alpha,alpha-trehalose-phosphate syn 98.68
cd03820348 GT1_amsD_like This family is most closely related 98.66
cd03799355 GT1_amsK_like This is a family of GT1 glycosyltran 98.66
cd05844367 GT1_like_7 Glycosyltransferases catalyze the trans 98.65
cd04949372 GT1_gtfA_like This family is most closely related 98.64
cd03819355 GT1_WavL_like This family is most closely related 98.64
TIGR02918500 accessory Sec system glycosylation protein GtfA. M 98.63
PLN02871465 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase 98.62
cd03825365 GT1_wcfI_like This family is most closely related 98.62
PLN02949463 transferase, transferring glycosyl groups 98.61
cd03801374 GT1_YqgM_like This family is most closely related 98.6
PRK15179694 Vi polysaccharide biosynthesis protein TviE; Provi 98.58
cd03814364 GT1_like_2 This family is most closely related to 98.58
cd03817374 GT1_UGDG_like This family is most closely related 98.56
cd03794394 GT1_wbuB_like This family is most closely related 98.55
cd03798377 GT1_wlbH_like This family is most closely related 98.51
cd04955363 GT1_like_6 This family is most closely related to 98.5
cd03823359 GT1_ExpE7_like This family is most closely related 98.5
PRK10307412 putative glycosyl transferase; Provisional 98.47
PHA01630331 putative group 1 glycosyl transferase 98.46
cd01635229 Glycosyltransferase_GTB_type Glycosyltransferases 98.45
cd04951360 GT1_WbdM_like This family is most closely related 98.42
cd03802335 GT1_AviGT4_like This family is most closely relate 98.4
cd03811353 GT1_WabH_like This family is most closely related 98.33
cd03806419 GT1_ALG11_like This family is most closely related 98.32
cd04946407 GT1_AmsK_like This family is most closely related 98.27
cd03812358 GT1_CapH_like This family is most closely related 98.27
cd03804351 GT1_wbaZ_like This family is most closely related 98.23
PRK14501 726 putative bifunctional trehalose-6-phosphate syntha 98.21
PLN03063 797 alpha,alpha-trehalose-phosphate synthase (UDP-form 98.17
TIGR03087397 stp1 sugar transferase, PEP-CTERM/EpsH1 system ass 98.02
PLN02846462 digalactosyldiacylglycerol synthase 97.96
cd03816415 GT1_ALG1_like This family is most closely related 97.94
KOG1111426 consensus N-acetylglucosaminyltransferase complex, 97.81
PRK10125405 putative glycosyl transferase; Provisional 97.71
PRK09922359 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D 97.69
PLN02501794 digalactosyldiacylglycerol synthase 97.64
TIGR02398487 gluc_glyc_Psyn glucosylglycerol-phosphate synthase 97.57
COG0438381 RfaG Glycosyltransferase [Cell envelope biogenesis 97.46
PLN02275371 transferase, transferring glycosyl groups 97.17
PLN03064 934 alpha,alpha-trehalose-phosphate synthase (UDP-form 96.75
KOG0853495 consensus Glycosyltransferase [Cell wall/membrane/ 96.72
PF13692135 Glyco_trans_1_4: Glycosyl transferases group 1; PD 96.42
cd04950373 GT1_like_1 Glycosyltransferases catalyze the trans 95.83
PRK05749425 3-deoxy-D-manno-octulosonic-acid transferase; Revi 95.46
TIGR03713519 acc_sec_asp1 accessory Sec system protein Asp1. Th 95.19
PF08323245 Glyco_transf_5: Starch synthase catalytic domain; 94.88
PRK13609380 diacylglycerol glucosyltransferase; Provisional 94.87
PRK00726357 murG undecaprenyldiphospho-muramoylpentapeptide be 94.63
PLN02605382 monogalactosyldiacylglycerol synthase 93.47
PRK13608391 diacylglycerol glucosyltransferase; Provisional 92.3
TIGR00236365 wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras 91.92
PF00982474 Glyco_transf_20: Glycosyltransferase family 20; In 91.42
PRK00025380 lpxB lipid-A-disaccharide synthase; Reviewed 91.29
TIGR01133348 murG undecaprenyldiphospho-muramoylpentapeptide be 90.63
PRK10117474 trehalose-6-phosphate synthase; Provisional 90.11
cd03785350 GT1_MurG MurG is an N-acetylglucosaminyltransferas 89.53
PLN02205 854 alpha,alpha-trehalose-phosphate synthase [UDP-form 88.59
PF05693633 Glycogen_syn: Glycogen synthase; InterPro: IPR0086 86.69
COG0380486 OtsA Trehalose-6-phosphate synthase [Carbohydrate 82.18
KOG1387465 consensus Glycosyltransferase [Cell wall/membrane/ 80.92
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=9.3e-200  Score=1601.96  Aligned_cols=672  Identities=53%  Similarity=0.893  Sum_probs=631.7

Q ss_pred             CcccCCcchHHHHHhcCcHHHHHHHHHHhCCCHHHHHccCCCCCCCCCCcccchhhhHhhhhccCCCeEEEeeccCCCcc
Q 005402            1 MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDSMATLNYPAWGYGLRYKYGLF   80 (698)
Q Consensus         1 ~Efl~Gr~l~~~l~nl~~~~~~~~~l~~lg~~~e~~~~~e~d~~lg~GGLG~LAgd~lkSaa~L~lP~~g~GL~Y~~GyF   80 (698)
                      |||+|||+|+|+++||||.+.|.+||.+||+++|++.++|+||+||||||||||+|||||||+||+|++||||||+||+|
T Consensus        88 lEf~mGRaL~Ntm~Nlglq~~~deAl~qlG~dlEel~e~E~DagLGNGGLGRLAaCFlDSMATlglpA~GYGlRYeyGiF  167 (843)
T KOG2099|consen   88 LEFYMGRALQNTMINLGLQNACDEALYQLGLDLEELEEQEEDAGLGNGGLGRLAACFLDSMATLGLPAYGYGLRYEYGIF  167 (843)
T ss_pred             hHHhhhhHHHHHHHhccCcchhHHHHHHhCcCHHHHHhcCcCcCcCCcchHHHHHHHHHHHhhcCCccccccceeehhhH
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eEEecCCceeecccccccCCCCcccccCCceEEeeeCCEEeeCCCCCeeeeCCeeEEEEEEeecCCCCCCCCeEEEEEEE
Q 005402           81 KQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWS  160 (698)
Q Consensus        81 ~Q~i~dG~Q~E~pd~Wl~~~npwe~~~~~~~~~V~~~G~v~~~~dg~~~w~~~~~v~a~~ydv~i~g~~~~~~~~lrlw~  160 (698)
                      +|+|.+|||+|.||+||+++||||+.|+++++||+|||+|++.++| .+|++|+.|.|+|||+|||||+|.++|+||||+
T Consensus       168 ~QkI~~g~Q~E~~ddWL~~gnPWE~~R~e~~lPV~FyGkV~~~~~g-~kWid~q~V~A~~YD~PvPGyk~n~vntlRLWs  246 (843)
T KOG2099|consen  168 KQKITDGWQVEEPDDWLRYGNPWEKARPEVMLPVHFYGKVEHTPDG-SKWIDTQVVLAMPYDTPVPGYKNNTVNTLRLWS  246 (843)
T ss_pred             HHHhcCCccccchHHHHHcCCchhhcCcceEeEEEEEEEEEeCCCc-ceeecceeEEEeccCCCCCCcccCcceeeeeec
Confidence            9999999999999999999999999999999999999999988877 579999999999999999999999999999999


Q ss_pred             ecCCCCcccccccCCCchhhHHHHhhhcccceeeecCCCcccccchhhhhhhhhhhhchHHHHHHHHHHhcCCCc-----
Q 005402          161 TMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANV-----  235 (698)
Q Consensus       161 ~~v~~~~~~l~~~~~~~~~~a~~~~~~~r~It~~LY~~D~~~~gkelRL~QE~~Lg~a~~~div~~~~~~~gG~~-----  235 (698)
                      |+ +.++|||..||.|+|.+|+.+++.+++||.+|||+|+..+||+||||||||+|+||+|||||||++..+|-|     
T Consensus       247 ak-a~~df~l~~fN~Gdy~~av~~~~~AenI~~VLYPnDnf~eGKeLRLKQqyf~caAtLqDIirRFk~sk~~~r~~~~~  325 (843)
T KOG2099|consen  247 AK-APNDFDLKDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQQYFLCAATLQDIIRRFKSSKFGCREPVRT  325 (843)
T ss_pred             cC-CCCCCCHHhccCchHHHHHHHHHhhhhceEEecCCCccccchhhhhhhhhhhhHHHHHHHHHHHhhcccCccccccc
Confidence            99 777999999999999999999999999999999999999999999999999999999999999998777633     


Q ss_pred             ccccCCccceEecCCCcccchHHHHHHHHHHhcCCCHHHHHHHhccceEEccccccccccccCCHHHHHHHchHHHHHHH
Q 005402          236 NWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSFELMQKLLPRHMEIIE  315 (698)
Q Consensus       236 ~l~~l~~~~~ihlNE~Hpa~~i~El~R~l~d~~gl~~~~A~~iv~~~~~fTtHTpvpeg~e~fp~~l~~~~lp~~~~ii~  315 (698)
                      .+++||++++||||||||+||||||||+|||.+||+|++||+||.+||.|||||++|||+|+||++||+++||||++||+
T Consensus       326 ~~~~FPdkVAiQlNDTHPtLaIpELmRiLvD~e~l~W~~AWdit~kT~AYTNHTVlpEALErWp~~L~e~LLPRHleIIy  405 (843)
T KOG2099|consen  326 NFEEFPDKVAIQLNDTHPTLAIPELMRILVDLEGLDWDKAWDITQKTCAYTNHTVLPEALERWPVSLMEKLLPRHLEIIY  405 (843)
T ss_pred             chhhCcHhheeeccCCCccccHHHHHHHHHhcccCCHHHHHHHhhhheeeccccccHHHHHHhhHHHHHHhhhHHHHHHH
Confidence            49999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhHHHHHHHHhhhCCCChhhHHHHHhcceEEecccccccc--eeeccccccCCCCCCCcccccccccCCCc--h-----
Q 005402          316 MIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATF--ADLFVKTKESTDVVPDDELENCDEEGGPV--D-----  386 (698)
Q Consensus       316 ~i~~~~~~~~~~~~~~~~~~~~~~~l~~~s~i~~~~~~~~v--a~l~~~~~~~~~~~~~~~i~~~t~g~h~~--~-----  386 (698)
                      +||++|+..+.++||+     |.+++.+||++++...+|+|  ||||+.+||.++++         ...|+-  |     
T Consensus       406 ~In~~~l~~i~~~fp~-----D~drlrrmsiiee~~~~k~i~MA~L~ivgsHaVNGV---------a~iHSeilK~~~F~  471 (843)
T KOG2099|consen  406 EINQRFLQTVAAKFPG-----DVDRLRRMSIIEENSPEKRINMAHLCIVGSHAVNGV---------AEIHSEILKQSVFK  471 (843)
T ss_pred             HHHHHHHHHHHHHCCC-----cHHHHhhhhhhhcCCccceeeeeeeeeecccccccH---------HHHHHHHHHHHHHH
Confidence            9999999999999999     89999999999993345777  99999555544431         111221  2     


Q ss_pred             hh--h--hhhh--hcCCCH---------------------------------------------------HHHHHHHHHH
Q 005402          387 EE--L--ESAQ--EDGVLE---------------------------------------------------EESTDVVSFI  409 (698)
Q Consensus       387 ~~--l--~k~~--tngi~~---------------------------------------------------~~K~~l~~~l  409 (698)
                      ++  |  +||+  ||||+|                                                   +||.+++++|
T Consensus       472 Df~e~~P~KFqNkTNGITPRRWL~~cnP~LadlI~e~ige~~i~dl~~l~~L~~~a~d~~f~~~~a~vK~~NKlk~a~~l  551 (843)
T KOG2099|consen  472 DFYELEPEKFQNKTNGITPRRWLLLCNPGLADLITEKIGEEWITDLDQLTKLRKFADDEEFQREWAKVKQENKLKLAAYL  551 (843)
T ss_pred             HHHHhChHHhccccCCcCHHHHHHhcCchHHHHHHHHhhhHhhhhHHHHHHHHHhcccHHHHHHHHHHHHhhHHHHHHHH
Confidence            22  3  8888  999987                                                   8999999999


Q ss_pred             HHHhCCCCCCCCceeeeccccchhhhhhhhhhHHHHHHHHHHhcChhhhhcccCCeEEEEEecCCccCHHHHHHHHHHHH
Q 005402          410 KEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITD  489 (698)
Q Consensus       410 ~~~~g~~~~~~~~~~~~v~R~~~yKR~~Lnil~~~~~l~~ik~~~~~~~~~~~~p~q~If~Gka~p~~~~~K~iIk~i~~  489 (698)
                      .+++|+.++|+++||+||||+||||||.||+|+++.||.+||+ +|.   +.++|++++|+|||+|+|++||.|||+|.+
T Consensus       552 e~e~~v~inp~smFDiqVKRIHEYKRQllN~l~vi~~y~riK~-e~~---k~fvprtvm~GGKaapgY~mAK~Iiklit~  627 (843)
T KOG2099|consen  552 EKEYGVKINPSSMFDIQVKRIHEYKRQLLNCLHVIYLYNRIKE-EPA---KAFVPRTVMIGGKAAPGYHMAKLIIKLITA  627 (843)
T ss_pred             HHHhCcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhh---hccCceEEEEcCccCchhHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999987 444   347899999999999999999999999999


Q ss_pred             HhhhhcCCCCCCCcceEEEEcCCCHHHHHhhccccccccccCCCcccCCCchhhHHHhcCceeeeeccccchhhhhhccC
Q 005402          490 VGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGE  569 (698)
Q Consensus       490 ~a~~in~dp~~~~~lkvvf~~nY~~~lA~~i~~g~Dv~l~~s~~~~EasGts~Mka~~NG~l~ist~DGw~vEi~~~~G~  569 (698)
                      ++.+||+||.+.++|||+|++||+|++|++|+||||+++++|++|+||||||+||+|+||+++|||+||+||||.|++|+
T Consensus       628 V~dvVN~Dp~vgd~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEASGT~NMKF~lNG~l~IGTlDGANVEm~eE~Ge  707 (843)
T KOG2099|consen  628 VADVVNNDPEVGDRLKVIFLENYRVSLAEKIIPASDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGANVEMAEEAGE  707 (843)
T ss_pred             HHHHhcCChhhhheeEEEEecCcccchhhhccchHHHHHHhhhccccccCCCcceEEecCeEEEecccccchHHHHHcCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceeecccchhhhhhhhhccCC--CCCCCChhHHHHHhhhhcCCCCCCC---HHHHHHhhccCCCCCCCccccccCChhH
Q 005402          570 ENFFLFGARAHEIAGLRKERSE--GKFVPDARFEEVKKFVKSGVFGSYN---YDELMGSLEGNEGFGQADYFLVGKDFPS  644 (698)
Q Consensus       570 ~N~~~fG~~~d~V~~~~~~~~~--~~~~~~~~~~~v~~~~~~G~F~~~~---~~~l~~~l~~~~~~~~~D~y~v~~Df~s  644 (698)
                      +|+|+||.++|+|..+++++..  ..|..+|++++|++.+.+|+|++.+   +.++++.+.+      .|+|+|++||+|
T Consensus       708 eN~FiFG~~~e~V~~L~k~gy~a~~~~~~~P~l~~v~~~i~sG~Fsp~~pd~fkd~~~~l~~------hD~f~V~~Df~s  781 (843)
T KOG2099|consen  708 ENFFIFGMRVEDVEALRKKGYNAQEYYDPLPELKQVIDQIESGFFSPKNPDEFKDIVNMLMY------HDYFLVFADFEA  781 (843)
T ss_pred             ccEEEecccHHHHHHHHhhcccccccCCCCchHHHHHHHHhcCccCCCCchHHHHHHHhhhc------cceEEeeCcHHH
Confidence            9999999999999999987422  2377899999999999999999887   5555666653      499999999999


Q ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhcccccCCC
Q 005402          645 YLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP  698 (698)
Q Consensus       645 y~~aq~~a~~~Y~d~~~W~~~~~~~ma~~~~FS~drsi~eY~~~iw~~~~~~~p  698 (698)
                      |++||++|+++|+|+++|.+|++.|+|.+|+|||||||.|||++||+|+|+++|
T Consensus       782 Yi~~q~kVd~~y~nqk~W~~msi~niA~sgkFSSDRtI~eYa~eIWnvep~~~~  835 (843)
T KOG2099|consen  782 YIKCQEKVDQLYRNQKEWLKMSILNIAGSGKFSSDRTIAEYAREIWNVEPSELP  835 (843)
T ss_pred             HHHHHHHHHHHHhCHHHHHHHHHHhhhcccccCccchHHHHHHHhcCCCcccCC
Confidence            999999999999999999999999999999999999999999999999999865

>PRK14985 maltodextrin phosphorylase; Provisional Back     alignment and domain information
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases Back     alignment and domain information
>PRK14986 glycogen phosphorylase; Provisional Back     alignment and domain information
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases Back     alignment and domain information
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences Back     alignment and domain information
>TIGR02094 more_P_ylases alpha-glucan phosphorylases Back     alignment and domain information
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK14098 glycogen synthase; Provisional Back     alignment and domain information
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type Back     alignment and domain information
>PLN02939 transferase, transferring glycosyl groups Back     alignment and domain information
>PRK00654 glgA glycogen synthase; Provisional Back     alignment and domain information
>PLN02316 synthase/transferase Back     alignment and domain information
>PRK14099 glycogen synthase; Provisional Back     alignment and domain information
>TIGR02470 sucr_synth sucrose synthase Back     alignment and domain information
>PLN00142 sucrose synthase Back     alignment and domain information
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose Back     alignment and domain information
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family Back     alignment and domain information
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase Back     alignment and domain information
>PHA01633 putative glycosyl transferase group 1 Back     alignment and domain information
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain Back     alignment and domain information
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant Back     alignment and domain information
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional Back     alignment and domain information
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis Back     alignment and domain information
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor Back     alignment and domain information
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional Back     alignment and domain information
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] Back     alignment and domain information
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria Back     alignment and domain information
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding Back     alignment and domain information
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>TIGR02918 accessory Sec system glycosylation protein GtfA Back     alignment and domain information
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase Back     alignment and domain information
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PLN02949 transferase, transferring glycosyl groups Back     alignment and domain information
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known Back     alignment and domain information
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional Back     alignment and domain information
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK10307 putative glycosyl transferase; Provisional Back     alignment and domain information
>PHA01630 putative group 1 glycosyl transferase Back     alignment and domain information
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli Back     alignment and domain information
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional Back     alignment and domain information
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional Back     alignment and domain information
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated Back     alignment and domain information
>PLN02846 digalactosyldiacylglycerol synthase Back     alignment and domain information
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases Back     alignment and domain information
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] Back     alignment and domain information
>PRK10125 putative glycosyl transferase; Provisional Back     alignment and domain information
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional Back     alignment and domain information
>PLN02501 digalactosyldiacylglycerol synthase Back     alignment and domain information
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase Back     alignment and domain information
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PLN02275 transferase, transferring glycosyl groups Back     alignment and domain information
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional Back     alignment and domain information
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A Back     alignment and domain information
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds Back     alignment and domain information
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed Back     alignment and domain information
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 Back     alignment and domain information
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 Back     alignment and domain information
>PRK13609 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional Back     alignment and domain information
>PLN02605 monogalactosyldiacylglycerol synthase Back     alignment and domain information
>PRK13608 diacylglycerol glucosyltransferase; Provisional Back     alignment and domain information
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase Back     alignment and domain information
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed Back     alignment and domain information
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase Back     alignment and domain information
>PRK10117 trehalose-6-phosphate synthase; Provisional Back     alignment and domain information
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis Back     alignment and domain information
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] Back     alignment and domain information
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 Back     alignment and domain information
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query698
2zb2_A849 Human Liver Glycogen Phosphorylase A Complexed With 1e-153
1em6_A847 Human Liver Glycogen Phosphorylase A Complexed With 1e-153
2qll_A847 Human Liver Glycogen Phosphorylase- Gl Complex Leng 1e-153
1fc0_A846 Human Liver Glycogen Phosphorylase Complexed With N 1e-153
1fa9_A846 Human Liver Glycogen Phosphorylase A Complexed With 1e-153
3dds_A848 Crystal Structure Of Glycogen Phosphorylase Complex 1e-153
1xoi_A846 Human Liver Glycogen Phosphorylase A Complexed With 1e-153
3ceh_A809 Human Liver Glycogen Phosphorylase (Tense State) In 1e-153
1z8d_A842 Crystal Structure Of Human Muscle Glycogen Phosphor 1e-146
1abb_A828 Control Of Phosphorylase B Conformation By A Modifi 1e-139
1c8l_A842 Synergistic Inhibition Of Glycogen Phosphorylase A 1e-139
1pyg_A842 Structural Basis For The Activation Of Glycogen Pho 1e-139
1gpa_A842 Structural Mechanism For Glycogen Phosphorylase Con 1e-139
2gm9_A825 Structure Of Rabbit Muscle Glycogen Phosphorylase I 1e-139
1c50_A830 Identification And Structural Characterization Of A 1e-139
7gpb_A842 Structural Mechanism For Glycogen Phosphorylase Con 1e-139
2gj4_A824 Structure Of Rabbit Muscle Glycogen Phosphorylase I 1e-139
2ffr_A825 Crystallographic Studies On N-Azido-Beta-D-Glucopyr 1e-139
2pyd_A843 The Crystal Structure Of Glycogen Phosphorylase In 1e-138
2g9q_A842 The Crystal Structure Of The Glycogen Phosphorylase 1e-138
1noi_A842 Complex Of Glycogen Phosphorylase With A Transition 1e-138
3nc4_A841 The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbaz 1e-138
1z6p_A842 Glycogen Phosphorylase Amp Site Inhibitor Complex L 1e-138
4ej2_A825 Crystal Structure Of Gpb In Complex With Dk10 Lengt 1e-138
1l5v_A796 Crystal Structure Of The Maltodextrin Phosphorylase 1e-132
1qm5_A796 Phosphorylase Recognition And Phosphorylysis Of Its 1e-131
2ecp_A796 The Crystal Structure Of The E. Coli Maltodextrin P 1e-130
1ahp_A797 Oligosaccharide Substrate Binding In Escherichia Co 1e-130
1ygp_B879 Phosphorylated Form Of Yeast Glycogen Phosphorylase 7e-91
1ygp_B879 Phosphorylated Form Of Yeast Glycogen Phosphorylase 5e-69
2c4m_A796 Starch Phosphorylase: Structural Studies Explain Ox 3e-63
>pdb|2ZB2|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcose And 5- Chloro-N-[4-(1, 2-Dihydroxyethyl)phenyl]-1h-Indole-2-Carboxamide Length = 849 Back     alignment and structure 
Iteration: 1

 Score =  540 bits (1390), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 316/756 (41%), Positives = 431/756 (57%), Gaps = 69/756 (9%)
Query: 1   MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDS 60
           +EF  GR L N + NLGL  A  EA+ +LG  +E +   E D            +CFLDS
Sbjct: 90  LEFYMGRTLQNTMINLGLQNACDEAIYQLGLDIEELEEIEEDAGLGNGGLGRLAACFLDS 149
Query: 61  MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKI 120
           MATL   A+GYG+RY+YG+F Q+I    Q E A+DWL  GNPWE  R +   PV FYGK+
Sbjct: 150 MATLGLAAYGYGIRYEYGIFNQKIRDGWQVEEADDWLRYGNPWEKSRPEFMLPVHFYGKV 209
Query: 121 VPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTK 180
              + G + WI  + + A+ YD P+PGY   T   +RLWS   P+ DF+L  FN GD+ +
Sbjct: 210 EHTNTG-TKWIDTQVVLALPYDTPVPGYMNNTVNTMRLWSARAPN-DFNLRDFNVGDYIQ 267
Query: 181 AAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRS-----GANV 235
           A      AE I  +LYP D   EGK LRLKQ+Y + +A+LQDII RF+        GA  
Sbjct: 268 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKASKFGSTRGAGT 327
Query: 236 NWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEAL 295
            ++ FP++VA+Q+NDTHP L IPEL+RI +D++ L W +AW +TQ+T AYTNHTVLPEAL
Sbjct: 328 VFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKLPWSKAWELTQKTFAYTNHTVLPEAL 387
Query: 296 EKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLE----------KRLKETR 345
           E+W  +L++KLLPRH+EII  I+++ +  IV+ +   D D L           KR+    
Sbjct: 388 ERWPVDLVEKLLPRHLEIIYEINQKHLDRIVALF-PKDVDRLRRMSLIEEEGSKRINMAH 446
Query: 346 IL----ENVDLPATFADLFVKTK---------------ESTDVVPDDELENCDEEGGPVD 386
           +       V+  A      VKTK               ++  + P   L  C+     + 
Sbjct: 447 LCIVGSHAVNGVAKIHSDIVKTKVFKDFSELEPDKFQNKTNGITPRRWLLLCNPGLAELI 506
Query: 387 EE---------------LESAQEDGVLEEESTDV--------VSFIKEKTGYSVSPDAMF 423
            E               L S   D V   E   V          F++ +    ++P +MF
Sbjct: 507 AEKIGEDYVKDLSQLTKLHSFLGDDVFLRELAKVKQENKLKFSQFLETEYKVKINPSSMF 566
Query: 424 DIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRI 483
           D+QVKRIHEYKRQL+N L ++  Y ++K+    + K  FVPR  I GGKA   Y  AK I
Sbjct: 567 DVQVKRIHEYKRQLLNCLHVITMYNRIKK----DPKKLFVPRTVIIGGKAAPGYHMAKMI 622
Query: 484 VKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNM 543
           +K IT V   VN+DP +G  LKVIF+ +Y VS+AE +IPA++LS+ ISTAG EASGT NM
Sbjct: 623 IKLITSVADVVNNDPMVGSKLKVIFLENYRVSLAEKVIPATDLSEQISTAGTEASGTGNM 682
Query: 544 KFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDA--RFE 601
           KF +NG + IGT+DGANVE+ +E GEEN F+FG R  ++A L K+  E K   +A    +
Sbjct: 683 KFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRIDDVAALDKKGYEAKEYYEALPELK 742
Query: 602 EVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKR 661
            V   + +G F     D     +  N  F   D F V  D+ +Y++CQ+KV + Y + K 
Sbjct: 743 LVIDQIDNGFFSPKQPDLFKDII--NMLFYH-DRFKVFADYEAYVKCQDKVSQLYMNPKA 799
Query: 662 WTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 697
           W  M + N A S KFSSDRTI+EYA++IWN+ P +L
Sbjct: 800 WNTMVLKNIAASGKFSSDRTIKEYAQNIWNVEPSDL 835
>pdb|1EM6|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Glcnac And Cp-526, 423 Length = 847 Back     alignment and structure
>pdb|2QLL|A Chain A, Human Liver Glycogen Phosphorylase- Gl Complex Length = 847 Back     alignment and structure
>pdb|1FC0|A Chain A, Human Liver Glycogen Phosphorylase Complexed With N-Acetyl-Beta-D- Glucopyranosylamine Length = 846 Back     alignment and structure
>pdb|1FA9|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Amp Length = 846 Back     alignment and structure
>pdb|3DDS|A Chain A, Crystal Structure Of Glycogen Phosphorylase Complexed With An Anthranilimide Based Inhibitor Gsk261 Length = 848 Back     alignment and structure
>pdb|1XOI|A Chain A, Human Liver Glycogen Phosphorylase A Complexed With Chloroindoloyl Glycine Amide Length = 846 Back     alignment and structure
>pdb|3CEH|A Chain A, Human Liver Glycogen Phosphorylase (Tense State) In Complex With The Allosteric Inhibitor Ave5688 Length = 809 Back     alignment and structure
>pdb|1Z8D|A Chain A, Crystal Structure Of Human Muscle Glycogen Phosphorylase A With Amp And Glucose Length = 842 Back     alignment and structure
>pdb|1ABB|A Chain A, Control Of Phosphorylase B Conformation By A Modified Cofactor: Crystallographic Studies On R-State Glycogen Phosphorylase Reconstituted With Pyridoxal 5'-Diphosphate Length = 828 Back     alignment and structure
>pdb|1C8L|A Chain A, Synergistic Inhibition Of Glycogen Phosphorylase A By A Potential Antidiabetic Drug And Caffeine Length = 842 Back     alignment and structure
>pdb|1PYG|A Chain A, Structural Basis For The Activation Of Glycogen Phosphorylase B By Adenosine Monophosphate Length = 842 Back     alignment and structure
>pdb|1GPA|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By Phosphorylation And Amp Length = 842 Back     alignment and structure
>pdb|2GM9|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Thienopyrrole Length = 825 Back     alignment and structure
>pdb|1C50|A Chain A, Identification And Structural Characterization Of A Novel Allosteric Binding Site Of Glycogen Phosphorylase B Length = 830 Back     alignment and structure
>pdb|7GPB|A Chain A, Structural Mechanism For Glycogen Phosphorylase Control By Phosphorylation And Amp Length = 842 Back     alignment and structure
>pdb|2GJ4|A Chain A, Structure Of Rabbit Muscle Glycogen Phosphorylase In Complex With Ligand Length = 824 Back     alignment and structure
>pdb|2FFR|A Chain A, Crystallographic Studies On N-Azido-Beta-D-Glucopyranosylamine, An Inhibitor Of Glycogen Phosphorylase: Comparison With N-Acetyl-Beta-D- Glucopyranosylamine Length = 825 Back     alignment and structure
>pdb|2PYD|A Chain A, The Crystal Structure Of Glycogen Phosphorylase In Complex With Glucose At 100 K Length = 843 Back     alignment and structure
>pdb|2G9Q|A Chain A, The Crystal Structure Of The Glycogen Phosphorylase B- 1ab Complex Length = 842 Back     alignment and structure
>pdb|1NOI|A Chain A, Complex Of Glycogen Phosphorylase With A Transition State Analogue Nojirimycin Tetrazole And Phosphate In The T And R States Length = 842 Back     alignment and structure
>pdb|3NC4|A Chain A, The Binding Of Beta-D-Glucopyranosyl-Thiosemicarbazone Derivatives To Glycogen Phosphorylase: A New Class Of Inhibitors Length = 841 Back     alignment and structure
>pdb|1Z6P|A Chain A, Glycogen Phosphorylase Amp Site Inhibitor Complex Length = 842 Back     alignment and structure
>pdb|4EJ2|A Chain A, Crystal Structure Of Gpb In Complex With Dk10 Length = 825 Back     alignment and structure
>pdb|1L5V|A Chain A, Crystal Structure Of The Maltodextrin Phosphorylase Complexed With Glucose-1-Phosphate Length = 796 Back     alignment and structure
>pdb|1QM5|A Chain A, Phosphorylase Recognition And Phosphorylysis Of Its Oligosaccharide Substrate: Answers To A Long Outstanding Question Length = 796 Back     alignment and structure
>pdb|2ECP|A Chain A, The Crystal Structure Of The E. Coli Maltodextrin Phosphorylase Complex Length = 796 Back     alignment and structure
>pdb|1AHP|A Chain A, Oligosaccharide Substrate Binding In Escherichia Coli Maltodextrin Phsphorylase Length = 797 Back     alignment and structure
>pdb|2C4M|A Chain A, Starch Phosphorylase: Structural Studies Explain Oxyanion- Dependent Kinetic Stability And Regulatory Control. Length = 796 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query698
2gj4_A824 Glycogen phosphorylase, muscle form; transferase; 0.0
2gj4_A824 Glycogen phosphorylase, muscle form; transferase; 1e-161
1l5w_A796 Maltodextrin phosphorylase; enzymatic catalysis, s 0.0
1l5w_A796 Maltodextrin phosphorylase; enzymatic catalysis, s 1e-157
1ygp_A879 Yeast glycogen phosphorylase; phosphorylated form, 0.0
1ygp_A879 Yeast glycogen phosphorylase; phosphorylated form, 1e-156
2c4m_A796 Glycogen phosphorylase; allosteric control, phosph 0.0
2c4m_A796 Glycogen phosphorylase; allosteric control, phosph 1e-160
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-06
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Length = 824 Back     alignment and structure
 Score =  556 bits (1435), Expect = 0.0
 Identities = 162/344 (47%), Positives = 222/344 (64%), Gaps = 8/344 (2%)

Query: 1   MEFLQGRALLNAIGNLGLTGAYAEALSKLGQSLENVVSQEPDAALGNGGLGRLASCFLDS 60
           +EF  GR L N + NL L  A  EA  +LG  +E +   E DA LGNGGLGRLA+CFLDS
Sbjct: 76  LEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDS 135

Query: 61  MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKI 120
           MATL   A+GYG+RY++G+F Q+I    Q E A+DWL  GNPWE  R + + PV FYG++
Sbjct: 136 MATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRV 195

Query: 121 VPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTK 180
              S G + W+  + + A+ YD P+PGY+      +RLWS      DF+L  FN G + +
Sbjct: 196 EHTSQG-AKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAK-APNDFNLKDFNVGGYIQ 253

Query: 181 AAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQDIIARFEKRSGANV----- 235
           A      AE I  +LYP D   EGK LRLKQ+Y + +A+LQDII RF+            
Sbjct: 254 AVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRT 313

Query: 236 NWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEAL 295
           N++ FP+KVA+Q+NDTHP+L IPEL+R+L+DL+ L W +AW +T +T AYTNHTVLPEAL
Sbjct: 314 NFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEAL 373

Query: 296 EKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEK 339
           E+W   L++ LLPRH++II  I++  ++ + + +   D D L +
Sbjct: 374 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFP-GDVDRLRR 416
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Length = 824 Back     alignment and structure
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Length = 796 Back     alignment and structure
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Length = 796 Back     alignment and structure
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Length = 796 Back     alignment and structure
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Length = 796 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query698
1ygp_A879 Yeast glycogen phosphorylase; phosphorylated form, 100.0
2gj4_A824 Glycogen phosphorylase, muscle form; transferase; 100.0
1l5w_A796 Maltodextrin phosphorylase; enzymatic catalysis, s 100.0
2c4m_A796 Glycogen phosphorylase; allosteric control, phosph 100.0
3vue_A536 GBSS-I, granule-bound starch synthase 1, chloropla 99.96
2qzs_A485 Glycogen synthase; glycosyl-transferase, GT-B fold 99.52
1rzu_A485 Glycogen synthase 1; glycosyl-transferase, GT-B fo 99.51
3nb0_A725 Glycogen [starch] synthase isoform 2; glycogen syn 99.38
3fro_A439 GLGA glycogen synthase; glycosyltransferase family 99.22
3s28_A816 Sucrose synthase 1; glycosyltransferase, sucrose m 99.13
2x6q_A416 Trehalose-synthase TRET; biosynthetic protein; 2.2 99.11
3oy2_A413 Glycosyltransferase B736L; rossmann fold, GDP-mann 99.03
1uqt_A482 Alpha, alpha-trehalose-phosphate synthase; glycosy 99.0
3okp_A394 GDP-mannose-dependent alpha-(1-6)-phosphatidylino 98.99
3c48_A438 Predicted glycosyltransferases; retaining glycosyl 98.97
2bfw_A200 GLGA glycogen synthase; glycosyltransferase family 98.89
2jjm_A394 Glycosyl transferase, group 1 family protein; anth 98.88
2r60_A499 Glycosyl transferase, group 1; rossmann-fold; 1.80 98.88
2iw1_A374 Lipopolysaccharide core biosynthesis protein RFAG; 98.85
3qhp_A166 Type 1 capsular polysaccharide biosynthesis prote 98.84
2gek_A406 Phosphatidylinositol mannosyltransferase (PIMA); G 98.73
2f9f_A177 First mannosyl transferase (WBAZ-1); alpha-beta pr 98.58
2iuy_A342 Avigt4, glycosyltransferase; antibiotics, family G 98.48
3t5t_A496 Putative glycosyltransferase; GTB fold, pseudoglyc 98.47
2vsy_A568 XCC0866; transferase, glycosyl transferase, GT-B, 98.09
2x0d_A413 WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge 98.03
1vgv_A384 UDP-N-acetylglucosamine 2-epimerase; structural ge 97.96
3beo_A375 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, a 97.91
1f0k_A364 MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pe 97.59
2hy7_A406 Glucuronosyltransferase GUMK; glycosyltransferases 97.56
1v4v_A376 UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, t 96.49
2xci_A374 KDO-transferase, 3-deoxy-D-manno-2-octulosonic aci 92.26
3dzc_A396 UDP-N-acetylglucosamine 2-epimerase; structural ge 90.52
3ot5_A403 UDP-N-acetylglucosamine 2-epimerase; structural ge 89.2
3q3e_A631 HMW1C-like glycosyltransferase; N-glycosylation; 2 87.4
3otg_A412 CALG1; calicheamicin, TDP, structural genomics, PS 80.63
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ... Back     alignment and structure
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A* Back     alignment and structure
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae} Back     alignment and structure
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A* Back     alignment and structure
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A Back     alignment and structure
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A Back     alignment and structure
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Back     alignment and structure
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A* Back     alignment and structure
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Back     alignment and structure
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Back     alignment and structure
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Back     alignment and structure
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A* Back     alignment and structure
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Back     alignment and structure
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Back     alignment and structure
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Back     alignment and structure
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Back     alignment and structure
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Back     alignment and structure
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Back     alignment and structure
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Back     alignment and structure
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Back     alignment and structure
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Back     alignment and structure
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Back     alignment and structure
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A* Back     alignment and structure
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A* Back     alignment and structure
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Back     alignment and structure
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A* Back     alignment and structure
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A Back     alignment and structure
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A* Back     alignment and structure
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A* Back     alignment and structure
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3 Back     alignment and structure
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A* Back     alignment and structure
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae} Back     alignment and structure
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes} Back     alignment and structure
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A Back     alignment and structure
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 698
d1ygpa_876 c.87.1.4 (A:) Glycogen phosphorylase {Baker's yeas 0.0
d2gj4a1824 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit 0.0
d1l5wa_796 c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {E 1e-176
>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 824 Back     information, alignment and structure
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Length = 796 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query698
d1ygpa_876 Glycogen phosphorylase {Baker's yeast (Saccharomyc 100.0
d2gj4a1824 Glycogen phosphorylase {Rabbit (Oryctolagus cunicu 100.0
d1l5wa_796 Maltodextrin phosphorylase (MALP) {Escherichia col 100.0
d1rzua_477 Glycogen synthase 1, GlgA {Agrobacterium tumefacie 99.83
d2bfwa1196 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 99.29
d2bisa1437 Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI 99.15
d2iw1a1370 Lipopolysaccharide core biosynthesis protein RfaG 98.89
d2f9fa1166 First mannosyl transferase WbaZ {Archaeoglobus ful 98.54
d1uqta_456 Trehalose-6-phosphate synthase, OtsA {Escherichia 98.48
>d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure