Citrus Sinensis ID: 008100

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------
MNTQHIHIQFLPQSFSLQKQCTSFTVVKRPSWFNSCSTSGAIVRCSVNEIEEQKQKQQVVKRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERTELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTGTGEPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCW
cccccEEEEEEcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccccccccccccEEEEccccccccccccccccccccHHHHHHHHHHcccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHccccEEEcccccccccccEEEccccccccccccccccEEEEccccEEEEHHHHHHHHHcccccccccHHHHHHHHccccccccEEEEEEEcccccccccccEEEEccccccccccEEEEEccccccHHHHcccccHHHHHHHHHHHHcccHHHHHHcccccccccccccEEcccccccccEEEEEEEEcccccccEEEccccccccHHHHHHccccEEEEEccccccccccccccccccEEEcccccccccccccccHHHHHHHHHHHHHHccccccEEEEEcccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccc
ccccEEEEEEcccccccccccEcEEEEcccccccEcccEccccccccEHHccHHcccHHHHHcccHHHHHHHHHHHHHHcccEEcccccccccccEEEEEcccccccccccccccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccccHHcccccHHHHHHHHHHHHHHHHccccEEEcccccccccccEEEEccEEEccccccccccEEEccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccEEEEEEEEcccccccccEEEEEEcccccEEEEEEEEEccccHHHHHHccHHHHHHHHHHHHHHHcccHHHHHHHHccccccEcccEEEccccccccEEEEEEEEEEcccccEEEEcccccHHHHHHHHHccccEEEEEccccccccHHHHHcccccEEEcccccccccccccccHHHHHHHHHHHHHHccccccEEEEEHHHHHHHHHHcccccccEEEEcccccEEEccHHccccEcccccEEcccccccccHHccHHHcccccccccccccccccccccHccccc
mntqhihiqflpqsfslqkqctsftvvkrpswfnscstsgaIVRCSVNEIEEQKQKQQVVKRaypfheiepkwqsywennrtfrtpdeidtskpkfyvldmfpypsgaglhvghplgyTATDILARLKRMqgynvlhpmgwdafglpaeqyaietgthpkittLRNINRFRTQLKSLGfsydwnreistiepayyKWTQWIFLQLLKRGLAyqaevpvnwcpalgtvlaneevvdgvsergghpvirkpMRQWMLKITEYADRLLddlddldwpeSVKEMQRNWigrsegaemdfrvldsdgqerdikitvyttrpdtifGATYLvvapehpllsSLVSTTQSQNIEEYKNLasrksdlertelqkektgvfsgcyarnpasgeaiPIWVADYVlgsygtgaimavpahdtrdheFALKFDISIhsvvmpddesssqsekaytgeglivnssnlisgldinglscQEATSKVIEWAEKtgngkkkvnYKLRDWLFARQRywgepipvvfldgtgetvplheaelpltlpelddftptgtgepplskaVSWVQttehssgkparretstmpqwagscw
mntqhihiqflpqsfslqKQCTSFTVVKRPSWFNSCSTSGAIVRCSVNEIEEQKQKQQVVKRAYPFheiepkwqsywennrtfrtpdeidtskPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGthpkittlrnINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDgvsergghpvirkpmrqWMLKITEYADRLLDDLDDLDWPESVKEMqrnwigrsegaemdfrvldsdgqerdIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYknlasrksdlertelqkektgvfsgcyarnpasGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEwaektgngkkkvnyKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTGTGEPPLSKAVSWVQTtehssgkparretstmpqwagscw
MNTQHIHIQFLPQSFSLQKQCTSFTVVKRPSWFNSCSTSGAIVRCSVNEIEEqkqkqqvvkRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYAdrllddlddldWPESVKEMQRNWIGRSEGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPllsslvsttqsqNIEEYKNLASRKSDLERTELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTGTGEPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCW
*****IHIQFLPQSFSLQKQCTSFTVVKRPSWFNSCSTSGAIVRCSVNEIEE***KQQVVKRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSL********************************GVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVV**************TGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTL*************************************************
**********LPQSFSL**************************************************EIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLAS**********QKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTGTGEPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCW
MNTQHIHIQFLPQSFSLQKQCTSFTVVKRPSWFNSCSTSGAIVRCSVNEIE**********RAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERTELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVV*************YTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTGTGEPPL*********************************
*NTQHIHIQFLPQSFSLQKQCTSFTVVKRPSWFNSCST******CSVNEIEE****Q*VVKRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERTELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTGTGEPPLSKAVSWVQTTEHSSG******************
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MNTQHIHIQFLPQSFSLQKQCTSFTVVKRPSWFNSCSTSGAIVRCSVNEIEEQKQKQQVVKRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERTELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTGTGEPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCW
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query577 2.2.26 [Sep-21-2011]
A7GU19 802 Leucine--tRNA ligase OS=B yes no 0.859 0.618 0.645 0.0
B7GK53 805 Leucine--tRNA ligase OS=A yes no 0.859 0.616 0.658 0.0
C5D6D7 805 Leucine--tRNA ligase OS=G yes no 0.859 0.616 0.662 0.0
Q9K7S8 806 Leucine--tRNA ligase OS=B yes no 0.859 0.615 0.656 0.0
A4IRY3 805 Leucine--tRNA ligase OS=G yes no 0.859 0.616 0.656 0.0
B9J1E1 802 Leucine--tRNA ligase OS=B yes no 0.861 0.619 0.644 0.0
B7HSS7 802 Leucine--tRNA ligase OS=B yes no 0.861 0.619 0.644 0.0
Q72YY8 802 Leucine--tRNA ligase OS=B yes no 0.861 0.619 0.644 0.0
Q816T0 802 Leucine--tRNA ligase OS=B yes no 0.861 0.619 0.642 0.0
B7H798 802 Leucine--tRNA ligase OS=B yes no 0.861 0.619 0.642 0.0
>sp|A7GU19|SYL_BACCN Leucine--tRNA ligase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=leuS PE=3 SV=1 Back     alignment and function desciption
 Score =  702 bits (1813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/516 (64%), Positives = 405/516 (78%), Gaps = 20/516 (3%)

Query: 63  AYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATD 122
           ++   EIE KWQ+YWE N+TFRTPDE D  KPKFY LDMFPYPSGAGLHVGHP GYTATD
Sbjct: 2   SFNHQEIEKKWQAYWEENKTFRTPDETD--KPKFYALDMFPYPSGAGLHVGHPEGYTATD 59

Query: 123 ILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYD 182
           IL+R+KRMQGYNVLHPMGWDAFGLPAEQYA++TG  P   T +NIN FR Q+KSLGFSYD
Sbjct: 60  ILSRMKRMQGYNVLHPMGWDAFGLPAEQYALDTGNSPAEFTEKNINTFRNQIKSLGFSYD 119

Query: 183 WNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGG 242
           W+RE++T +P YYKWTQWIFL+L ++GLAY  E+PVNWCPALGTVLANEEV+DG SERGG
Sbjct: 120 WDREVNTTDPNYYKWTQWIFLKLFEKGLAYVDEIPVNWCPALGTVLANEEVIDGKSERGG 179

Query: 243 HPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDG 302
           HPV R+PM+QWMLKIT YADRLL+DLD+LDWPES+K+MQRNWIGRSEGAE+ F +   DG
Sbjct: 180 HPVERRPMKQWMLKITAYADRLLEDLDELDWPESLKDMQRNWIGRSEGAEVHFNI---DG 236

Query: 303 QERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERT 362
            ++  K T++TTRPDT+FGATY V+APEH L++ + +  Q   +E Y ++   KSDLERT
Sbjct: 237 TDK--KFTIFTTRPDTLFGATYCVLAPEHALVAEITTEDQKGAVEAYIDVVKSKSDLERT 294

Query: 363 ELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDI 422
           EL KEKTGVF+G YA NP +GE +PIW+ADYVL SYGTGA+MAVPAHD RD+EFA  FD+
Sbjct: 295 ELAKEKTGVFTGAYAINPVNGEKLPIWIADYVLASYGTGAVMAVPAHDERDYEFAKTFDL 354

Query: 423 SIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNG 482
            +  VV   D     +++AYT +G  ++S+ L      NGL+ +EA +K+IEW E TG G
Sbjct: 355 PMKEVVKGGD----ITKEAYTADGEHIDSAFL------NGLNKEEAIAKMIEWLEVTGAG 404

Query: 483 KKKVNYKLRDWLFARQRYWGEPIPVV-FLDGTGETVPLHEAELPLTLPELDDFTPTGTGE 541
            +KV Y+LRDWLF+RQRYWGEPIP++ + DGT   V   E ELPL LP+ D+  P+GTGE
Sbjct: 405 NQKVTYRLRDWLFSRQRYWGEPIPIIHWEDGTMTAV--KEEELPLVLPKTDNIRPSGTGE 462

Query: 542 PPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCW 577
            PL+    WV   +  +GK  RRET+TMPQWAGSCW
Sbjct: 463 SPLANIDEWVNVVDPETGKKGRRETNTMPQWAGSCW 498

Bacillus cereus subsp. cytotoxis (strain NVH 391-98) (taxid: 315749)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 4
>sp|B7GK53|SYL_ANOFW Leucine--tRNA ligase OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=leuS PE=3 SV=1 Back     alignment and function description
>sp|C5D6D7|SYL_GEOSW Leucine--tRNA ligase OS=Geobacillus sp. (strain WCH70) GN=leuS PE=3 SV=1 Back     alignment and function description
>sp|Q9K7S8|SYL_BACHD Leucine--tRNA ligase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=leuS PE=3 SV=1 Back     alignment and function description
>sp|A4IRY3|SYL_GEOTN Leucine--tRNA ligase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=leuS PE=3 SV=2 Back     alignment and function description
>sp|B9J1E1|SYL_BACCQ Leucine--tRNA ligase OS=Bacillus cereus (strain Q1) GN=leuS PE=3 SV=1 Back     alignment and function description
>sp|B7HSS7|SYL_BACC7 Leucine--tRNA ligase OS=Bacillus cereus (strain AH187) GN=leuS PE=3 SV=1 Back     alignment and function description
>sp|Q72YY8|SYL_BACC1 Leucine--tRNA ligase OS=Bacillus cereus (strain ATCC 10987) GN=leuS PE=3 SV=1 Back     alignment and function description
>sp|Q816T0|SYL_BACCR Leucine--tRNA ligase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=leuS PE=3 SV=1 Back     alignment and function description
>sp|B7H798|SYL_BACC4 Leucine--tRNA ligase OS=Bacillus cereus (strain B4264) GN=leuS PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query577
255554793 960 leucyl-tRNA synthetase, putative [Ricinu 0.989 0.594 0.810 0.0
224115854 974 predicted protein [Populus trichocarpa] 0.986 0.584 0.804 0.0
225444321 971 PREDICTED: leucyl-tRNA synthetase [Vitis 0.994 0.591 0.784 0.0
449479692 1059 PREDICTED: leucine--tRNA ligase-like [Cu 0.932 0.508 0.833 0.0
356522021 972 PREDICTED: leucyl-tRNA synthetase-like [ 0.913 0.542 0.843 0.0
449434392 978 PREDICTED: leucine--tRNA ligase-like [Cu 0.932 0.550 0.833 0.0
147773742 893 hypothetical protein VITISV_036142 [Viti 0.897 0.580 0.866 0.0
357480365 1091 Leucyl-tRNA synthetase [Medicago truncat 1.0 0.528 0.751 0.0
357497939 1009 Leucyl-tRNA synthetase [Medicago truncat 1.0 0.571 0.751 0.0
15233478 973 leucyl-tRNA synthetase [Arabidopsis thal 0.993 0.588 0.729 0.0
>gi|255554793|ref|XP_002518434.1| leucyl-tRNA synthetase, putative [Ricinus communis] gi|223542279|gb|EEF43821.1| leucyl-tRNA synthetase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  934 bits (2415), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 472/582 (81%), Positives = 510/582 (87%), Gaps = 11/582 (1%)

Query: 5   HIHIQFLPQS------FSLQKQCTSFTVVKRPSW---FNSCSTSGAIVRCSVNEIEEQKQ 55
           ++  QFLP S      F   K   SF   K   +   +       + VR SVNE  EQ+Q
Sbjct: 6   YMLTQFLPSSPFHHRQFHFTKTTLSFKPAKNSVFNLNYGGFEFKSSRVRSSVNE--EQEQ 63

Query: 56  KQQVVKRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHP 115
           KQ +VK+AYPFHEIEPKWQ YWE+N TFRTPDEIDTSKPKFYVLDMFPYPSG+GLHVGHP
Sbjct: 64  KQPMVKKAYPFHEIEPKWQRYWEDNHTFRTPDEIDTSKPKFYVLDMFPYPSGSGLHVGHP 123

Query: 116 LGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLK 175
           LGYTATDILAR +RMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFR+QLK
Sbjct: 124 LGYTATDILARFRRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRSQLK 183

Query: 176 SLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVD 235
           SLGFSYDW+REISTIEP YYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVD
Sbjct: 184 SLGFSYDWDREISTIEPEYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVD 243

Query: 236 GVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDF 295
           G+SERGGHPVIRKPMRQWML+IT YADRLL+DLDDLDWPESVK+MQRNWIGRSEGAEM+F
Sbjct: 244 GLSERGGHPVIRKPMRQWMLRITAYADRLLEDLDDLDWPESVKDMQRNWIGRSEGAEMEF 303

Query: 296 RVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASR 355
            VLD DG+ERDI +TVYTTRPDTIFGATYLVVAPEH LL SLVS +QS+N+EEYK+LASR
Sbjct: 304 HVLDDDGKERDINLTVYTTRPDTIFGATYLVVAPEHSLLPSLVSLSQSKNVEEYKDLASR 363

Query: 356 KSDLERTELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHE 415
           KSDLERTELQKEKTGVFSGCYARNPA+GEAIPIWVADYVLGSYGTGAIMAVPAHDTRD+E
Sbjct: 364 KSDLERTELQKEKTGVFSGCYARNPANGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDYE 423

Query: 416 FALKFDISIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEW 475
           FA  +DI I  VV  DDE  S S  AY GEG I+NSSNL  GLDINGLS + A SKVIEW
Sbjct: 424 FATAYDIPIRWVVKADDEGCSDSGMAYAGEGTILNSSNLTLGLDINGLSSKAAASKVIEW 483

Query: 476 AEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFT 535
           AEKTGNGKKKVN+KLRDWLFARQRYWGEPIPVVF++ TGE VPL E +LPL LPELDDFT
Sbjct: 484 AEKTGNGKKKVNFKLRDWLFARQRYWGEPIPVVFVEDTGEGVPLLETDLPLRLPELDDFT 543

Query: 536 PTGTGEPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCW 577
           PTGTGEPPL+KAVSWV+TT+ SSGKPA+RET+TMPQWAGSCW
Sbjct: 544 PTGTGEPPLTKAVSWVKTTDPSSGKPAKRETNTMPQWAGSCW 585

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224115854|ref|XP_002317141.1| predicted protein [Populus trichocarpa] gi|222860206|gb|EEE97753.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225444321|ref|XP_002264138.1| PREDICTED: leucyl-tRNA synthetase [Vitis vinifera] gi|302144097|emb|CBI23202.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449479692|ref|XP_004155678.1| PREDICTED: leucine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356522021|ref|XP_003529648.1| PREDICTED: leucyl-tRNA synthetase-like [Glycine max] Back     alignment and taxonomy information
>gi|449434392|ref|XP_004134980.1| PREDICTED: leucine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|147773742|emb|CAN74190.1| hypothetical protein VITISV_036142 [Vitis vinifera] Back     alignment and taxonomy information
>gi|357480365|ref|XP_003610468.1| Leucyl-tRNA synthetase [Medicago truncatula] gi|355511523|gb|AES92665.1| Leucyl-tRNA synthetase [Medicago truncatula] Back     alignment and taxonomy information
>gi|357497939|ref|XP_003619258.1| Leucyl-tRNA synthetase [Medicago truncatula] gi|355494273|gb|AES75476.1| Leucyl-tRNA synthetase [Medicago truncatula] Back     alignment and taxonomy information
>gi|15233478|ref|NP_192344.1| leucyl-tRNA synthetase [Arabidopsis thaliana] gi|4982478|gb|AAD36946.1|AF069441_6 putative leucyl tRNA synthetase [Arabidopsis thaliana] gi|7267192|emb|CAB77903.1| putative leucyl tRNA synthetase [Arabidopsis thaliana] gi|19310531|gb|AAL84999.1| AT4g04350/T19B17_7 [Arabidopsis thaliana] gi|25090241|gb|AAN72260.1| At4g04350/T19B17_7 [Arabidopsis thaliana] gi|332656983|gb|AEE82383.1| leucyl-tRNA synthetase [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query577
TAIR|locus:2134887 973 EMB2369 "EMBRYO DEFECTIVE 2369 0.915 0.542 0.767 2.8e-231
TIGR_CMR|BA_4991 802 BA_4991 "leucyl-tRNA synthetas 0.859 0.618 0.625 1.1e-176
UNIPROTKB|P67510 969 leuS "Leucine--tRNA ligase" [M 0.613 0.365 0.489 1.8e-129
TIGR_CMR|CHY_0393 821 CHY_0393 "leucyl-tRNA syntheta 0.861 0.605 0.500 1.1e-128
TIGR_CMR|DET_0194 813 DET_0194 "leucyl-tRNA syntheta 0.864 0.613 0.455 1.5e-120
TIGR_CMR|GSU_2209 824 GSU_2209 "leucyl-tRNA syntheta 0.852 0.597 0.451 8.8e-118
TIGR_CMR|CBU_0559 820 CBU_0559 "leucyl-tRNA syntheta 0.847 0.596 0.446 8.4e-113
POMBASE|SPAC4G8.09 874 SPAC4G8.09 "mitochondrial leuc 0.578 0.382 0.451 7.1e-111
TIGR_CMR|SO_1174 859 SO_1174 "leucyl-tRNA synthetas 0.802 0.538 0.469 2.6e-109
UNIPROTKB|P07813 860 leuS "leucyl-tRNA synthetase" 0.812 0.545 0.450 5.8e-105
TAIR|locus:2134887 EMB2369 "EMBRYO DEFECTIVE 2369" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2231 (790.4 bits), Expect = 2.8e-231, P = 2.8e-231
 Identities = 405/528 (76%), Positives = 452/528 (85%)

Query:    50 IEEXXXXXXXXXRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAG 109
             + E         R YPFHEIEPKWQ YWE+NR FRTPD++DTSKPKFYVLDMFPYPSGAG
Sbjct:    71 VSETATTSIELKRVYPFHEIEPKWQRYWEDNRIFRTPDDVDTSKPKFYVLDMFPYPSGAG 130

Query:   110 LHVGHPLGYTATDILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINR 169
             LHVGHPLGYTATDILARL+RMQGYNVLHPMGWDAFGLPAEQYAIETGTHPK TTL+NI+R
Sbjct:   131 LHVGHPLGYTATDILARLRRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKTTTLKNIDR 190

Query:   170 FRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLA 229
             FR QLKSLGFSYDW+RE+ST EP YYKWTQWIFLQL K+GLAYQAEVPVNWCPALGTVLA
Sbjct:   191 FRLQLKSLGFSYDWDRELSTTEPDYYKWTQWIFLQLYKKGLAYQAEVPVNWCPALGTVLA 250

Query:   230 NEEVVDGVSERGGHPVIRKPMRQWMLKITEYAXXXXXXXXXXXWPESVKEMQRNWIGRSE 289
             NEEVVDGVSERGGHPVIRKPMRQWMLKIT YA           WPES+KEMQRNWIGRSE
Sbjct:   251 NEEVVDGVSERGGHPVIRKPMRQWMLKITAYADRLLEDLDELEWPESIKEMQRNWIGRSE 310

Query:   290 GAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPXXXXXXXXXXXXNIEEY 349
             GAE++F +LD +G+E D +ITVYTTRPDT+FGATY+VVAPEH              +EEY
Sbjct:   311 GAELNFSILDGEGRETDKEITVYTTRPDTLFGATYMVVAPEHQLLSYFVTAEQKQQVEEY 370

Query:   350 KNLASRKSDLERTELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAH 409
             K+ ASRKSDLERTELQK+KTGVF+GCYA+NPA+G+AIPIWVADYVL SYGTGAIMAVPAH
Sbjct:   371 KDFASRKSDLERTELQKDKTGVFTGCYAKNPANGDAIPIWVADYVLASYGTGAIMAVPAH 430

Query:   410 DTRDHEFALKFDISIHSVVMPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEAT 469
             DTRD+EFALK++I I  VV  +  SS  +++ Y G G+I NSS L +GLDIN LS +EA 
Sbjct:   431 DTRDNEFALKYNIPIKWVVRNEANSSDDAKQVYPGLGIIENSSTLETGLDINQLSSKEAA 490

Query:   470 SKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLP 529
              KVIEWAE+TGNGKKKVNYKLRDWLFARQRYWGEPIP++ LD +GET+ + E+ELPLTLP
Sbjct:   491 LKVIEWAERTGNGKKKVNYKLRDWLFARQRYWGEPIPILILDESGETIAISESELPLTLP 550

Query:   530 ELDDFTPTGTGEPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCW 577
             EL+DFTPTGTGEPPLSKAVSWV T + S+GKPA+RETSTMPQWAGSCW
Sbjct:   551 ELNDFTPTGTGEPPLSKAVSWVNTVDPSTGKPAKRETSTMPQWAGSCW 598
GO:0000166 "nucleotide binding" evidence=IEA
GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA;ISS
GO:0004823 "leucine-tRNA ligase activity" evidence=IEA
GO:0005524 "ATP binding" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM;IEA
GO:0006418 "tRNA aminoacylation for protein translation" evidence=IEA;ISS
GO:0006429 "leucyl-tRNA aminoacylation" evidence=IEA
GO:0009793 "embryo development ending in seed dormancy" evidence=RCA;IMP;NAS
GO:0009507 "chloroplast" evidence=IDA
GO:0005739 "mitochondrion" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0006364 "rRNA processing" evidence=RCA
GO:0006399 "tRNA metabolic process" evidence=RCA
GO:0009658 "chloroplast organization" evidence=RCA
GO:0010027 "thylakoid membrane organization" evidence=RCA
GO:0010103 "stomatal complex morphogenesis" evidence=RCA
GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA
GO:0016226 "iron-sulfur cluster assembly" evidence=RCA
GO:0016556 "mRNA modification" evidence=RCA
GO:0048481 "ovule development" evidence=RCA
TIGR_CMR|BA_4991 BA_4991 "leucyl-tRNA synthetase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|P67510 leuS "Leucine--tRNA ligase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_0393 CHY_0393 "leucyl-tRNA synthetase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|DET_0194 DET_0194 "leucyl-tRNA synthetase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_2209 GSU_2209 "leucyl-tRNA synthetase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0559 CBU_0559 "leucyl-tRNA synthetase" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
POMBASE|SPAC4G8.09 SPAC4G8.09 "mitochondrial leucine-tRNA ligase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
TIGR_CMR|SO_1174 SO_1174 "leucyl-tRNA synthetase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|P07813 leuS "leucyl-tRNA synthetase" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q92AZ9SYL_LISIN6, ., 1, ., 1, ., 40.61370.85090.6114yesno
B7HSS7SYL_BACC76, ., 1, ., 1, ., 40.64460.86130.6197yesno
Q5KW09SYL_GEOKA6, ., 1, ., 1, ., 40.65310.85960.6161yesno
A8FGG0SYL_BACP26, ., 1, ., 1, ., 40.62790.85960.6169yesno
B9J1E1SYL_BACCQ6, ., 1, ., 1, ., 40.64460.86130.6197yesno
Q81KK6SYL_BACAN6, ., 1, ., 1, ., 40.64270.86130.6197yesno
Q9K7S8SYL_BACHD6, ., 1, ., 1, ., 40.65690.85960.6153yesno
Q816T0SYL_BACCR6, ., 1, ., 1, ., 40.64270.86130.6197yesno
Q5HNF1SYL_STAEQ6, ., 1, ., 1, ., 40.62710.85780.6156yesno
Q4L7A3SYL_STAHJ6, ., 1, ., 1, ., 40.61620.85960.6169yesno
Q72YY8SYL_BACC16, ., 1, ., 1, ., 40.64460.86130.6197yesno
C3LAX2SYL_BACAC6, ., 1, ., 1, ., 40.64270.86130.6197yesno
Q632V2SYL_BACCZ6, ., 1, ., 1, ., 40.64270.86130.6197yesno
B7H798SYL_BACC46, ., 1, ., 1, ., 40.64270.86130.6197yesno
B1HXY7SYL_LYSSC6, ., 1, ., 1, ., 40.62130.86130.6173yesno
A0RJX2SYL_BACAH6, ., 1, ., 1, ., 40.64270.86130.6197yesno
B7GK53SYL_ANOFW6, ., 1, ., 1, ., 40.65890.85960.6161yesno
A7GU19SYL_BACCN6, ., 1, ., 1, ., 40.64530.85960.6184yesno
B9E7H4SYL_MACCJ6, ., 1, ., 1, ., 40.62200.85610.6159yesno
P36430SYL_BACSU6, ., 1, ., 1, ., 40.63560.85960.6169yesno
B7IL05SYL_BACC26, ., 1, ., 1, ., 40.63880.86130.6197yesno
C5D6D7SYL_GEOSW6, ., 1, ., 1, ., 40.66270.85960.6161yesno
Q49YI8SYL_STAS16, ., 1, ., 1, ., 40.61740.85780.6156yesno
A7Z7V7SYL_BACA26, ., 1, ., 1, ., 40.62980.85960.6169yesno
Q65FX8SYL_BACLD6, ., 1, ., 1, ., 40.62790.85960.6169yesno
C3PBK0SYL_BACAA6, ., 1, ., 1, ., 40.64270.86130.6197yesno
Q6HCE2SYL_BACHK6, ., 1, ., 1, ., 40.64270.86130.6197yesno
C0ZB13SYL_BREBN6, ., 1, ., 1, ., 40.62980.85960.6161yesno
A4IRY3SYL_GEOTN6, ., 1, ., 1, ., 40.65690.85960.6161yesno
B1YKH4SYL_EXIS26, ., 1, ., 1, ., 40.63100.85780.6179yesno
A9VLA2SYL_BACWK6, ., 1, ., 1, ., 40.64140.85960.6184yesno
B7JT07SYL_BACC06, ., 1, ., 1, ., 40.64270.86130.6197yesno
Q8CNU8SYL_STAES6, ., 1, ., 1, ., 40.62710.85780.6156yesno
Q8EP12SYL_OCEIH6, ., 1, ., 1, ., 40.62400.85960.6169yesno
C1EW09SYL_BACC36, ., 1, ., 1, ., 40.64270.86130.6197yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer6.1.1.40.824
3rd Layer6.1.10.766

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query577
PLN02563 963 PLN02563, PLN02563, aminoacyl-tRNA ligase 0.0
PRK00390 805 PRK00390, leuS, leucyl-tRNA synthetase; Validated 0.0
TIGR00396 842 TIGR00396, leuS_bact, leucyl-tRNA synthetase, euba 0.0
COG0495 814 COG0495, LeuS, Leucyl-tRNA synthetase [Translation 0.0
cd00812314 cd00812, LeuRS_core, catalytic core domain of leuc 9e-88
pfam13603178 pfam13603, tRNA-synt_1_2, Leucyl-tRNA synthetase, 5e-77
COG0525 877 COG0525, ValS, Valyl-tRNA synthetase [Translation, 7e-62
TIGR00422 861 TIGR00422, valS, valyl-tRNA synthetase 2e-53
PRK13208 800 PRK13208, valS, valyl-tRNA synthetase; Reviewed 3e-47
pfam00133606 pfam00133, tRNA-synt_1, tRNA synthetases class I ( 1e-45
cd00817382 cd00817, ValRS_core, catalytic core domain of valy 3e-44
cd00668312 cd00668, Ile_Leu_Val_MetRS_core, catalytic core do 3e-33
COG0060 933 COG0060, IleS, Isoleucyl-tRNA synthetase [Translat 6e-33
TIGR00395 938 TIGR00395, leuS_arch, leucyl-tRNA synthetase, arch 9e-33
TIGR00392 861 TIGR00392, ileS, isoleucyl-tRNA synthetase 5e-32
cd00814319 cd00814, MetRS_core, catalytic core domain of meth 2e-26
PTZ00419 995 PTZ00419, PTZ00419, valyl-tRNA synthetase-like pro 2e-26
PRK14900 1052 PRK14900, valS, valyl-tRNA synthetase; Provisional 3e-26
COG0143558 COG0143, MetG, Methionyl-tRNA synthetase [Translat 1e-25
PRK05729 874 PRK05729, valS, valyl-tRNA synthetase; Reviewed 2e-24
PRK12300 897 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed 8e-24
cd00818338 cd00818, IleRS_core, catalytic core domain of isol 9e-24
pfam09334388 pfam09334, tRNA-synt_1g, tRNA synthetases class I 9e-24
PRK06039 975 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewe 9e-23
PRK11893511 PRK11893, PRK11893, methionyl-tRNA synthetase; Rev 3e-20
PRK05743 912 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewe 7e-20
PLN02381 1066 PLN02381, PLN02381, valyl-tRNA synthetase 1e-19
PLN02843 974 PLN02843, PLN02843, isoleucyl-tRNA synthetase 1e-18
PRK12268556 PRK12268, PRK12268, methionyl-tRNA synthetase; Rev 3e-18
TIGR00398530 TIGR00398, metG, methionyl-tRNA synthetase 4e-17
PLN02943 958 PLN02943, PLN02943, aminoacyl-tRNA ligase 4e-16
PRK13804 961 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisi 5e-16
PRK12267 648 PRK12267, PRK12267, methionyl-tRNA synthetase; Rev 1e-11
PRK00133 673 PRK00133, metG, methionyl-tRNA synthetase; Reviewe 2e-10
PLN02882 1159 PLN02882, PLN02882, aminoacyl-tRNA ligase 4e-10
PRK12300 897 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed 3e-09
PTZ00427 1205 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putati 2e-08
PLN02959 1084 PLN02959, PLN02959, aminoacyl-tRNA ligase 5e-08
PRK05729 874 PRK05729, valS, valyl-tRNA synthetase; Reviewed 6e-05
PRK06039 975 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewe 5e-04
cd00818338 cd00818, IleRS_core, catalytic core domain of isol 8e-04
PRK13208 800 PRK13208, valS, valyl-tRNA synthetase; Reviewed 0.003
cd00817382 cd00817, ValRS_core, catalytic core domain of valy 0.004
>gnl|CDD|178177 PLN02563, PLN02563, aminoacyl-tRNA ligase Back     alignment and domain information 
 Score = 1095 bits (2834), Expect = 0.0
 Identities = 444/567 (78%), Positives = 484/567 (85%), Gaps = 4/567 (0%)

Query: 11  LPQSFSLQKQCTSFTVVKRPSWFNSCSTSGAIVRCSVNEIEEQKQKQQVVKRAYPFHEIE 70
           +  + +     + F   +R     S   +               +     KRAYPFHEIE
Sbjct: 29  VSSAQTPASASSYFRRSRRGGVSRS--LTRRAFAAPSALTSTTAKTTPAAKRAYPFHEIE 86

Query: 71  PKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRM 130
           PKWQ YWE NRTFRTPD++DTSKPKFYVLDMFPYPSGAGLHVGHP GYTATDILAR KRM
Sbjct: 87  PKWQRYWEENRTFRTPDDVDTSKPKFYVLDMFPYPSGAGLHVGHPEGYTATDILARYKRM 146

Query: 131 QGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTI 190
           QGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTL+NI RFR+QLKSLGFSYDW+REIST 
Sbjct: 147 QGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLKNIARFRSQLKSLGFSYDWDREISTT 206

Query: 191 EPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPM 250
           EP YYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDG+SERGGHPVIRKPM
Sbjct: 207 EPEYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGLSERGGHPVIRKPM 266

Query: 251 RQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDGQERDIKIT 310
           RQWMLKIT YADRLL+DLDDLDWPES+KEMQRNWIGRSEGAE+DF VLD +G+ERD KIT
Sbjct: 267 RQWMLKITAYADRLLEDLDDLDWPESIKEMQRNWIGRSEGAELDFSVLDGEGKERDEKIT 326

Query: 311 VYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERTELQKEKTG 370
           VYTTRPDT+FGATYLVVAPEHPLLSSL +  Q + +EEY + ASRKSDLERTELQKEKTG
Sbjct: 327 VYTTRPDTLFGATYLVVAPEHPLLSSLTTAEQKEAVEEYVDAASRKSDLERTELQKEKTG 386

Query: 371 VFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMP 430
           VF+G YA NPA+GEAIPIWVADYVLGSYGTGAIMAVPAHDTRD EFA KFD+ I  VV P
Sbjct: 387 VFTGSYAINPATGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDFEFAQKFDLPIKWVVKP 446

Query: 431 DDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKL 490
            D +   +EKAYTGEG+IVNSS+  SGLDINGLS +EA  KVIEW E+TGNGKKKVNYKL
Sbjct: 447 ADGNEDDAEKAYTGEGVIVNSSS--SGLDINGLSSKEAAKKVIEWLEETGNGKKKVNYKL 504

Query: 491 RDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTGTGEPPLSKAVSW 550
           RDWLFARQRYWGEPIPVVFL+ +GE VP+ E++LPLTLPELDDFTPTGTGEPPL+KAVSW
Sbjct: 505 RDWLFARQRYWGEPIPVVFLEDSGEPVPVPESDLPLTLPELDDFTPTGTGEPPLAKAVSW 564

Query: 551 VQTTEHSSGKPARRETSTMPQWAGSCW 577
           V T + SSGKPARRET+TMPQWAGSCW
Sbjct: 565 VNTVDPSSGKPARRETNTMPQWAGSCW 591

Length = 963
>gnl|CDD|234743 PRK00390, leuS, leucyl-tRNA synthetase; Validated Back     alignment and domain information
>gnl|CDD|232956 TIGR00396, leuS_bact, leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>gnl|CDD|223569 COG0495, LeuS, Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|173906 cd00812, LeuRS_core, catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|222257 pfam13603, tRNA-synt_1_2, Leucyl-tRNA synthetase, Domain 2 Back     alignment and domain information
>gnl|CDD|223599 COG0525, ValS, Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|232969 TIGR00422, valS, valyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|237306 PRK13208, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|215739 pfam00133, tRNA-synt_1, tRNA synthetases class I (I, L, M and V) Back     alignment and domain information
>gnl|CDD|185677 cd00817, ValRS_core, catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|185674 cd00668, Ile_Leu_Val_MetRS_core, catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>gnl|CDD|223138 COG0060, IleS, Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|232955 TIGR00395, leuS_arch, leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>gnl|CDD|232953 TIGR00392, ileS, isoleucyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|173907 cd00814, MetRS_core, catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|240411 PTZ00419, PTZ00419, valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>gnl|CDD|237855 PRK14900, valS, valyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|223221 COG0143, MetG, Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237049 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|173909 cd00818, IleRS_core, catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|220185 pfam09334, tRNA-synt_1g, tRNA synthetases class I (M) Back     alignment and domain information
>gnl|CDD|235681 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|237012 PRK11893, PRK11893, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|235588 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|215214 PLN02381, PLN02381, valyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|215452 PLN02843, PLN02843, isoleucyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|237029 PRK12268, PRK12268, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|232957 TIGR00398, metG, methionyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|215509 PLN02943, PLN02943, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|237514 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|237028 PRK12267, PRK12267, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|234655 PRK00133, metG, methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|215477 PLN02882, PLN02882, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|237049 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|173617 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>gnl|CDD|215518 PLN02959, PLN02959, aminoacyl-tRNA ligase Back     alignment and domain information
>gnl|CDD|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|235681 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|173909 cd00818, IleRS_core, catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>gnl|CDD|237306 PRK13208, valS, valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|185677 cd00817, ValRS_core, catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 577
PLN02563 963 aminoacyl-tRNA ligase 100.0
TIGR00396 842 leuS_bact leucyl-tRNA synthetase, eubacterial and 100.0
PRK00390 805 leuS leucyl-tRNA synthetase; Validated 100.0
KOG0435 876 consensus Leucyl-tRNA synthetase [Translation, rib 100.0
COG0060 933 IleS Isoleucyl-tRNA synthetase [Translation, ribos 100.0
COG0495 814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 100.0
PRK06039 975 ileS isoleucyl-tRNA synthetase; Reviewed 100.0
PRK05743 912 ileS isoleucyl-tRNA synthetase; Reviewed 100.0
PRK13804 961 ileS isoleucyl-tRNA synthetase; Provisional 100.0
TIGR00392 861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 100.0
PLN02882 1159 aminoacyl-tRNA ligase 100.0
PLN02843 974 isoleucyl-tRNA synthetase 100.0
COG0525 877 ValS Valyl-tRNA synthetase [Translation, ribosomal 100.0
PTZ00427 1205 isoleucine-tRNA ligase, putative; Provisional 100.0
PF00133 601 tRNA-synt_1: tRNA synthetases class I (I, L, M and 100.0
PLN02943 958 aminoacyl-tRNA ligase 100.0
PTZ00419 995 valyl-tRNA synthetase-like protein; Provisional 100.0
PRK14900 1052 valS valyl-tRNA synthetase; Provisional 100.0
PRK13208 800 valS valyl-tRNA synthetase; Reviewed 100.0
PLN02381 1066 valyl-tRNA synthetase 100.0
TIGR00422 861 valS valyl-tRNA synthetase. The valyl-tRNA synthet 100.0
PRK05729 874 valS valyl-tRNA synthetase; Reviewed 100.0
KOG0433 937 consensus Isoleucyl-tRNA synthetase [Translation, 100.0
KOG0434 1070 consensus Isoleucyl-tRNA synthetase [Translation, 100.0
PLN02959 1084 aminoacyl-tRNA ligase 100.0
TIGR00395 938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 100.0
KOG0432 995 consensus Valyl-tRNA synthetase [Translation, ribo 100.0
PRK12300 897 leuS leucyl-tRNA synthetase; Reviewed 100.0
cd00817382 ValRS_core catalytic core domain of valyl-tRNA syn 100.0
cd00818338 IleRS_core catalytic core domain of isoleucyl-tRNA 100.0
PLN02224616 methionine-tRNA ligase 100.0
COG0143558 MetG Methionyl-tRNA synthetase [Translation, ribos 100.0
PLN02610 801 probable methionyl-tRNA synthetase 100.0
PRK12267 648 methionyl-tRNA synthetase; Reviewed 100.0
PRK00133 673 metG methionyl-tRNA synthetase; Reviewed 100.0
PF09334391 tRNA-synt_1g: tRNA synthetases class I (M); InterP 100.0
PRK12268556 methionyl-tRNA synthetase; Reviewed 100.0
PF13603185 tRNA-synt_1_2: Leucyl-tRNA synthetase, Domain 2; P 100.0
cd00814319 MetRS_core catalytic core domain of methioninyl-tR 100.0
PRK11893511 methionyl-tRNA synthetase; Reviewed 100.0
TIGR00398530 metG methionyl-tRNA synthetase. The methionyl-tRNA 100.0
KOG0437 1080 consensus Leucyl-tRNA synthetase [Translation, rib 100.0
cd00812314 LeuRS_core catalytic core domain of leucyl-tRNA sy 100.0
cd00668312 Ile_Leu_Val_MetRS_core catalytic core domain of is 99.98
KOG0436578 consensus Methionyl-tRNA synthetase [Translation, 99.95
PLN02946557 cysteine-tRNA ligase 99.85
PRK00260463 cysS cysteinyl-tRNA synthetase; Validated 99.84
TIGR00435465 cysS cysteinyl-tRNA synthetase. This model finds t 99.83
TIGR03447411 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino- 99.79
PRK14536490 cysS cysteinyl-tRNA synthetase; Provisional 99.78
PRK12418384 cysteinyl-tRNA synthetase; Provisional 99.77
PRK14535699 cysS cysteinyl-tRNA synthetase; Provisional 99.77
cd00672213 CysRS_core catalytic core domain of cysteinyl tRNA 99.76
KOG1247567 consensus Methionyl-tRNA synthetase [Translation, 99.75
PTZ00399 651 cysteinyl-tRNA-synthetase; Provisional 99.73
cd00671212 ArgRS_core catalytic core domain of arginyl-tRNA s 99.72
PRK14534481 cysS cysteinyl-tRNA synthetase; Provisional 99.69
PRK01611507 argS arginyl-tRNA synthetase; Reviewed 99.66
PF01406300 tRNA-synt_1e: tRNA synthetases class I (C) catalyt 99.61
cd00674353 LysRS_core_class_I catalytic core domain of class 99.57
COG0215464 CysS Cysteinyl-tRNA synthetase [Translation, ribos 99.54
cd00802143 class_I_aaRS_core catalytic core domain of class I 99.31
KOG2007586 consensus Cysteinyl-tRNA synthetase [Translation, 99.3
PRK00750510 lysK lysyl-tRNA synthetase; Reviewed 99.25
TIGR00467515 lysS_arch lysyl-tRNA synthetase, archaeal and spir 99.01
TIGR00456566 argS arginyl-tRNA synthetase. This model recognize 98.93
COG0018577 ArgS Arginyl-tRNA synthetase [Translation, ribosom 98.84
PF00750354 tRNA-synt_1d: tRNA synthetases class I (R); InterP 98.71
PRK12451562 arginyl-tRNA synthetase; Reviewed 98.64
PLN02286576 arginine-tRNA ligase 98.5
cd09287240 GluRS_non_core catalytic core domain of non-discri 98.4
PRK04156567 gltX glutamyl-tRNA synthetase; Provisional 98.21
cd00668312 Ile_Leu_Val_MetRS_core catalytic core domain of is 97.99
TIGR00463560 gltX_arch glutamyl-tRNA synthetase, archaeal and e 97.91
PRK12558445 glutamyl-tRNA synthetase; Provisional 97.76
PLN03233523 putative glutamate-tRNA ligase; Provisional 97.72
PTZ00437574 glutaminyl-tRNA synthetase; Provisional 97.7
TIGR03838272 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthe 97.69
PTZ00402601 glutamyl-tRNA synthetase; Provisional 97.68
PF00749314 tRNA-synt_1c: tRNA synthetases class I (E and Q), 97.62
PLN02907722 glutamate-tRNA ligase 97.61
PRK12268 556 methionyl-tRNA synthetase; Reviewed 97.58
cd00807238 GlnRS_core catalytic core domain of glutaminyl-tRN 97.58
PRK05710299 glutamyl-Q tRNA(Asp) synthetase; Reviewed 97.56
TIGR00440522 glnS glutaminyl-tRNA synthetase. This protein is a 97.5
COG0008472 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr 97.47
PRK14895513 gltX glutamyl-tRNA synthetase; Provisional 97.43
PRK12410433 glutamylglutaminyl-tRNA synthetase; Provisional 97.43
PRK05347554 glutaminyl-tRNA synthetase; Provisional 97.41
PRK12267 648 methionyl-tRNA synthetase; Reviewed 97.4
TIGR00464470 gltX_bact glutamyl-tRNA synthetase, bacterial fami 97.36
PLN02859788 glutamine-tRNA ligase 97.36
cd00808239 GluRS_core catalytic core domain of discriminating 97.22
cd00418230 GlxRS_core catalytic core domain of glutamyl-tRNA 97.19
PRK11893 511 methionyl-tRNA synthetase; Reviewed 97.11
PRK14703 771 glutaminyl-tRNA synthetase/YqeY domain fusion prot 97.08
PLN02627535 glutamyl-tRNA synthetase 97.06
PRK01406476 gltX glutamyl-tRNA synthetase; Reviewed 97.01
COG1384521 LysS Lysyl-tRNA synthetase (class I) [Translation, 96.93
PF01921360 tRNA-synt_1f: tRNA synthetases class I (K); InterP 96.9
KOG1147712 consensus Glutamyl-tRNA synthetase [Translation, r 96.64
TIGR00398 530 metG methionyl-tRNA synthetase. The methionyl-tRNA 96.46
KOG4426656 consensus Arginyl-tRNA synthetase [Translation, ri 95.45
cd00812314 LeuRS_core catalytic core domain of leucyl-tRNA sy 95.23
cd00814319 MetRS_core catalytic core domain of methioninyl-tR 94.88
PRK00133 673 metG methionyl-tRNA synthetase; Reviewed 94.35
PLN02882 1159 aminoacyl-tRNA ligase 94.29
PRK06039 975 ileS isoleucyl-tRNA synthetase; Reviewed 94.11
KOG1148764 consensus Glutaminyl-tRNA synthetase [Translation, 93.91
PRK14900 1052 valS valyl-tRNA synthetase; Provisional 93.68
PRK13208 800 valS valyl-tRNA synthetase; Reviewed 93.53
TIGR00392 861 ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA 93.48
TIGR00422 861 valS valyl-tRNA synthetase. The valyl-tRNA synthet 93.45
KOG1195567 consensus Arginyl-tRNA synthetase [Translation, ri 92.84
PTZ00427 1205 isoleucine-tRNA ligase, putative; Provisional 92.65
PRK05729 874 valS valyl-tRNA synthetase; Reviewed 92.33
COG0060 933 IleS Isoleucyl-tRNA synthetase [Translation, ribos 91.21
PRK05743 912 ileS isoleucyl-tRNA synthetase; Reviewed 91.15
TIGR00395 938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 90.11
PLN02943 958 aminoacyl-tRNA ligase 89.08
PTZ00419 995 valyl-tRNA synthetase-like protein; Provisional 88.06
PRK13804 961 ileS isoleucyl-tRNA synthetase; Provisional 87.57
PLN02843 974 isoleucyl-tRNA synthetase 87.16
PF00133601 tRNA-synt_1: tRNA synthetases class I (I, L, M and 85.47
PLN02486383 aminoacyl-tRNA ligase 84.66
PLN02224 616 methionine-tRNA ligase 83.84
COG0495 814 LeuS Leucyl-tRNA synthetase [Translation, ribosoma 83.52
COG1656165 Uncharacterized conserved protein [Function unknow 82.52
PLN02381 1066 valyl-tRNA synthetase 82.23
PRK12285368 tryptophanyl-tRNA synthetase; Reviewed 82.03
COG0525 877 ValS Valyl-tRNA synthetase [Translation, ribosomal 81.39
PF01927147 Mut7-C: Mut7-C RNAse domain; InterPro: IPR002782 T 80.91
COG0143 558 MetG Methionyl-tRNA synthetase [Translation, ribos 80.58
>PLN02563 aminoacyl-tRNA ligase Back     alignment and domain information 
Probab=100.00  E-value=8.6e-128  Score=1109.81  Aligned_cols=533  Identities=83%  Similarity=1.368  Sum_probs=480.9

Q ss_pred             cccchhHHHHHhhhhhhcccCCCchhhhHHHHHHHHHCCCccCCCCCCCCCCcEEEEcCCCCCCCCCCCcchhhHhHHHH
Q 008100           43 VRCSVNEIEEQKQKQQVVKRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATD  122 (577)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~~~~y~~~~iE~~~~~~W~~~~~f~~~~~~~~~~~~f~i~~~pPypng~~LHiGHa~~~v~~D  122 (577)
                      ++++..+++..++..+.+++.|+|.++|++||++|+++++|+...+.+.++++||+++|||||||.+|||||+++++++|
T Consensus        59 ~~~~~~~~~~~~~~~~~~~~~y~~~~iE~kwq~~W~e~~~f~~~~~~~~~k~k~~v~~~~PYpnG~~lHiGH~~~y~~~D  138 (963)
T PLN02563         59 FAAPSALTSTTAKTTPAAKRAYPFHEIEPKWQRYWEENRTFRTPDDVDTSKPKFYVLDMFPYPSGAGLHVGHPEGYTATD  138 (963)
T ss_pred             cccccchhhhhhhcccccCCCCCHHHHHHHHHHHHHhCCCccccccccCCCCCEEEEeCCCCCCCcccchhhHHHHHHHH
Confidence            33444455556666667899999999999999999999999976433567889999999999999449999999999999


Q ss_pred             HHHHHHHHcCCcccCcccccccChHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCCCCCCCceeCCChhhHHHHHHHH
Q 008100          123 ILARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIF  202 (577)
Q Consensus       123 vi~Ry~rm~G~~V~~~~G~D~~Glpie~~a~~~g~~~~~~~~~~~~~~~~~l~~lGi~~Dw~~~~~T~d~~~~~~v~~~f  202 (577)
                      +++||+||+||+|++++|||+||+|+|++|++.|..+++++.++++.|++||++||+++||+++|.|+||.|+++++|+|
T Consensus       139 viaRy~Rm~G~~Vl~~~G~D~~GlPiE~~a~~~g~~p~~~~~~~i~~~~~q~~~lG~s~DW~r~~~T~dp~y~~~~q~~F  218 (963)
T PLN02563        139 ILARYKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLKNIARFRSQLKSLGFSYDWDREISTTEPEYYKWTQWIF  218 (963)
T ss_pred             HHHHHHHhcCCeecccccccccCcHHHHHHHHcCCChHHhHHHHHHHHHHHHHHhCcEeeCCCCeecCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHCCceeeeccCcccCCCCCccCCchhhccCccccCCcCeEEEecccchhhHhhhhHHHhhccCCCCCCHHHHHHHH
Q 008100          203 LQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQR  282 (577)
Q Consensus       203 ~~L~~kGliy~~~~~v~wc~~~~t~Ls~~Ev~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~l~~~l~~~~~p~~~~~~~~  282 (577)
                      .+|+++|+||++.++|+|||.|+|+||++||++++|++||+++++++++||||+|++|+++|+++|+.+.||+++++||+
T Consensus       219 ~~L~~~GliY~~~~~v~wcp~~~T~La~~Ev~~~~~~~~~~~~~~~~~~q~f~~it~ya~~L~~~l~~~~wp~~v~~~q~  298 (963)
T PLN02563        219 LQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGLSERGGHPVIRKPMRQWMLKITAYADRLLEDLDDLDWPESIKEMQR  298 (963)
T ss_pred             HHHHHCCCEEeeeeeeeecCCcCCCCCHHHhhcCCCcCCCCceEEEecceeEEecchhHHHHHHhhhhcCCCHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhccCCceEEEEeecCCCCCccceEEEecCCCCccccCcEEEEcCCCccchhhccccchhhHHHHHHHHhcccchhhh
Q 008100          283 NWIGRSEGAEMDFRVLDSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERT  362 (577)
Q Consensus       283 ~~i~~~~~~~~~f~l~~~~~~~~~~~l~iwTT~P~Tl~an~av~V~p~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (577)
                      ||||++.+++++|++.+.++...+.+|+||||||||||||+||+|||+++|+..++..++...+++|+....+.+++++.
T Consensus       299 nwiG~s~g~~i~F~~~~~~~~~~~~~l~V~TTrPeTl~g~t~iav~p~~~yv~~~~~~~~~~~v~~y~~~~~~~~~~~~~  378 (963)
T PLN02563        299 NWIGRSEGAELDFSVLDGEGKERDEKITVYTTRPDTLFGATYLVVAPEHPLLSSLTTAEQKEAVEEYVDAASRKSDLERT  378 (963)
T ss_pred             HhccccceEEEEEEecCccccCCCCEEEEEeCCChHHhhccEEEECCCChhhHhhhcccchHHHHHHHHHHhchhHHhhh
Confidence            99999999999999864322112358999999999999999999999999987776554445567888877666666655


Q ss_pred             hhhhcccccccceEEecCCCCCeeeEEeecccccCCCCCceeccCCCChhhHHHHHHcCCeeEEeecCCCCCCccccccc
Q 008100          363 ELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMPDDESSSQSEKAY  442 (577)
Q Consensus       363 ~~~~~~~~~~~G~~~~~P~~~~~ipIi~~d~V~~~~GTGiVh~aPaHg~~Dy~~~~k~~L~i~~~v~~~~~~~~~~~~~~  442 (577)
                      ....+++|.|+|.++.||++++.+||+.++||++++|||+||+|||||++||++|++||||++++|+++++........|
T Consensus       379 ~~~~~k~g~~~g~~~~~P~~~~~iPI~~ad~V~~~~GTGaVm~~PaHd~~D~~~a~k~~Lpi~~vI~~~d~~~~~~~~~y  458 (963)
T PLN02563        379 ELQKEKTGVFTGSYAINPATGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDFEFAQKFDLPIKWVVKPADGNEDDAEKAY  458 (963)
T ss_pred             hccceecccccCcEEeccCCCCeeEEEEecccCCCCCCCeEEEcCCCCHHHHHHHHHcCCCceeeeccCccccccccccc
Confidence            55567889999999999999999999999999999999999999999999999999999999999975422211223468


Q ss_pred             cccceEeccCccccccccCCCCHHHHHHHHHHHHHhcCCCceeeeeccCcccccCcCccccccceEEECCCCeeeecCCC
Q 008100          443 TGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEA  522 (577)
Q Consensus       443 ~~~g~~v~~~~~~~~~~~~g~~~~~a~~~ii~~l~~~g~~~~~~~~~~~DWcISRQR~WG~PIPv~~~~~~g~~~~~~~~  522 (577)
                      .+.|+++++..  .+.+++||..++|+.+|+++|.+.|.++++++|+++|||||||||||+|||||||++||++++++++
T Consensus       459 ~~~G~l~ns~~--~~~~~~Gl~~~eA~~~Ii~~L~~~g~~~~~v~y~lrDW~ISRQRyWG~PIPi~~c~~cg~~v~v~e~  536 (963)
T PLN02563        459 TGEGVIVNSSS--SGLDINGLSSKEAAKKVIEWLEETGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLEDSGEPVPVPES  536 (963)
T ss_pred             cCceeEecCCC--cccccCCcCHHHHHHHHHHHHHhCCCCCCeeEecCCCceEeeecccCCceEEEEEcCCCcEEecchH
Confidence            88899988642  1234899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcCCCCCCCCcCccCccccccccCCCCCCcccccCcccccccCCC
Q 008100          523 ELPLTLPELDDFTPTGTGEPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCW  577 (577)
Q Consensus       523 ~l~~~l~~~~~~~~~G~~~~~l~~~~~~v~~~~~~~g~~~~R~tDtmD~WfdSsW  577 (577)
                      +||+.||+++++.+.|.+.+||+++.+|+++.||+||+.++||||||||||||||
T Consensus       537 ~Lpv~lpe~~~~~~~~~g~~pl~~~~~~~~~~~p~cg~~~~RetDtmDtw~~Ssw  591 (963)
T PLN02563        537 DLPLTLPELDDFTPTGTGEPPLAKAVSWVNTVDPSSGKPARRETNTMPQWAGSCW  591 (963)
T ss_pred             hCcccchhhhhcccCCCCCCchhcchhhhcCcCcCCCCCcEECCCcCCchhhccH
Confidence            9999999988887788888999999999999999999999999999999999999

>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family Back     alignment and domain information
>PRK00390 leuS leucyl-tRNA synthetase; Validated Back     alignment and domain information
>KOG0435 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>PLN02882 aminoacyl-tRNA ligase Back     alignment and domain information
>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PTZ00427 isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information
>PTZ00419 valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02381 valyl-tRNA synthetase Back     alignment and domain information
>TIGR00422 valS valyl-tRNA synthetase Back     alignment and domain information
>PRK05729 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG0433 consensus Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG0434 consensus Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02959 aminoacyl-tRNA ligase Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>KOG0432 consensus Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases Back     alignment and domain information
>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases Back     alignment and domain information
>PLN02224 methionine-tRNA ligase Back     alignment and domain information
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02610 probable methionyl-tRNA synthetase Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK00133 metG methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK12268 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF13603 tRNA-synt_1_2: Leucyl-tRNA synthetase, Domain 2; PDB: 2AJH_B 4ARI_A 2AJG_B 4AQ7_D 2AJI_B 4ARC_A 4AS1_A 2BTE_A 2V0G_A 2BYT_A Back     alignment and domain information
>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00398 metG methionyl-tRNA synthetase Back     alignment and domain information
>KOG0437 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>KOG0436 consensus Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02946 cysteine-tRNA ligase Back     alignment and domain information
>PRK00260 cysS cysteinyl-tRNA synthetase; Validated Back     alignment and domain information
>TIGR00435 cysS cysteinyl-tRNA synthetase Back     alignment and domain information
>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase Back     alignment and domain information
>PRK14536 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12418 cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14535 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase Back     alignment and domain information
>KOG1247 consensus Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PTZ00399 cysteinyl-tRNA-synthetase; Provisional Back     alignment and domain information
>cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>PRK14534 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK01611 argS arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase Back     alignment and domain information
>COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>KOG2007 consensus Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete Back     alignment and domain information
>TIGR00456 argS arginyl-tRNA synthetase Back     alignment and domain information
>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF00750 tRNA-synt_1d: tRNA synthetases class I (R); InterPro: IPR015945 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PRK12451 arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02286 arginine-tRNA ligase Back     alignment and domain information
>cd09287 GluRS_non_core catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>TIGR00463 gltX_arch glutamyl-tRNA synthetase, archaeal and eukaryotic family Back     alignment and domain information
>PRK12558 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN03233 putative glutamate-tRNA ligase; Provisional Back     alignment and domain information
>PTZ00437 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase Back     alignment and domain information
>PTZ00402 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PLN02907 glutamate-tRNA ligase Back     alignment and domain information
>PRK12268 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00807 GlnRS_core catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>PRK05710 glutamyl-Q tRNA(Asp) synthetase; Reviewed Back     alignment and domain information
>TIGR00440 glnS glutaminyl-tRNA synthetase Back     alignment and domain information
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK14895 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12410 glutamylglutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK05347 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family Back     alignment and domain information
>PLN02859 glutamine-tRNA ligase Back     alignment and domain information
>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>PLN02627 glutamyl-tRNA synthetase Back     alignment and domain information
>PRK01406 gltX glutamyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG1384 LysS Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF01921 tRNA-synt_1f: tRNA synthetases class I (K); InterPro: IPR002904 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00398 metG methionyl-tRNA synthetase Back     alignment and domain information
>KOG4426 consensus Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>PRK00133 metG methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PLN02882 aminoacyl-tRNA ligase Back     alignment and domain information
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>KOG1148 consensus Glutaminyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK14900 valS valyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00392 ileS isoleucyl-tRNA synthetase Back     alignment and domain information
>TIGR00422 valS valyl-tRNA synthetase Back     alignment and domain information
>KOG1195 consensus Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PTZ00427 isoleucine-tRNA ligase, putative; Provisional Back     alignment and domain information
>PRK05729 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>PLN02943 aminoacyl-tRNA ligase Back     alignment and domain information
>PTZ00419 valyl-tRNA synthetase-like protein; Provisional Back     alignment and domain information
>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02843 isoleucyl-tRNA synthetase Back     alignment and domain information
>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PLN02486 aminoacyl-tRNA ligase Back     alignment and domain information
>PLN02224 methionine-tRNA ligase Back     alignment and domain information
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG1656 Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PLN02381 valyl-tRNA synthetase Back     alignment and domain information
>PRK12285 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF01927 Mut7-C: Mut7-C RNAse domain; InterPro: IPR002782 This prokaryotic family of proteins have no known function Back     alignment and domain information
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query577
2v0c_A 878 Leucyl-Trna Synthetase From Thermus Thermophilus Co 1e-136
1obh_A 878 Leucyl-Trna Synthetase From Thermus Thermophilus Co 1e-136
4aq7_A 880 Ternary Complex Of E. Coli Leucyl-Trna Synthetase, 1e-114
3ziu_A 637 Crystal Structure Of Mycoplasma Mobile Leucyl-trna 9e-83
3ziu_A 637 Crystal Structure Of Mycoplasma Mobile Leucyl-trna 2e-20
3o0a_A219 Crystal Structure Of The Wild Type Cp1 Hydrolitic D 3e-39
3pz0_A221 The Crystal Structure Of Aaleurs-Cp1 Length = 221 2e-37
3pz5_A201 The Crystal Structure Of Aaleurs-Cp1-D20 Length = 2 1e-36
2ajg_A196 Crystal Structure Of The Editing Domain Of E. Coli 6e-29
1wkb_A 810 Crystal Structure Of Leucyl-Trna Synthetase From Th 1e-27
1wz2_A 967 The Crystal Structure Of Leucyl-Trna Synthetase And 3e-27
1qu2_A 917 Insights Into Editing From An Ile-Trna Synthetase S 4e-21
1gax_A 862 Crystal Structure Of Thermus Thermophilus Valyl-Trn 2e-16
1jzq_A 821 Isoleucyl-Trna Synthetase Complexed With Isoleucyl- 3e-13
2csx_A497 Crystal Structure Of Aquifex Aeolicus Methionyl-Trn 7e-10
4dlp_A536 Crystal Structure Of Methionyl-Trna Synthetase Metr 8e-10
2x1l_A524 Crystal Structure Of Mycobacterium Smegmatis Methio 5e-09
1a8h_A500 Methionyl-Trna Synthetase From Thermus Thermophilus 6e-09
2d54_A502 Crystal Structure Of Methionyl Trna Synthetase Y225 6e-09
1woy_A500 Crystal Structure Of Methionyl Trna Synthetase Y225 6e-09
3kfl_A564 Leishmania Major Methionyl-Trna Synthetase In Compl 1e-06
1p7p_A551 Methionyl-trna Synthetase From Escherichia Coli Com 4e-04
1f4l_A551 Crystal Structure Of The E.Coli Methionyl-Trna Synt 5e-04
3h9c_A547 Structure Of Methionyl-Trna Synthetase: Crystal For 5e-04
1qqt_A551 Methionyl-Trna Synthetase From Escherichia Coli Len 5e-04
>pdb|2V0C|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed With A Sulphamoyl Analogue Of Leucyl-Adenylate In The Synthetic Site And An Adduct Of Amp With 5-Fluoro-1,3- Dihydro-1-Hydroxy-2,1-Benzoxaborole (An2690) In The Editing Site Length = 878 Back     alignment and structure 
Iteration: 1

 Score =  482 bits (1240), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 255/517 (49%), Positives = 325/517 (62%), Gaps = 17/517 (3%)
Query: 64  YPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDI 123
           Y  H IE KWQ +WE  + F    ++   + K YVL MFPYPSG  LH+GH   YT  D+
Sbjct: 4   YNPHAIEAKWQRFWEE-KGFMKAKDLPGGRGKQYVLVMFPYPSG-DLHMGHLKNYTMGDV 61
Query: 124 LARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDW 183
           LAR +RMQGY VLHPMGWDAFGLPAE  A++ G HPK  T  NI + +  L+ +G  YDW
Sbjct: 62  LARFRRMQGYEVLHPMGWDAFGLPAENAALKFGVHPKDWTYANIRQAKESLRLMGILYDW 121
Query: 184 NREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSERG-G 242
           +RE++T EP YY+W QWIFL++ ++GLAY+A+  VNWCP   TVLANE+VV+G   R   
Sbjct: 122 DREVTTCEPEYYRWNQWIFLKMWEKGLAYRAKGLVNWCPKCQTVLANEQVVEGRCWRHED 181
Query: 243 HPVIRKPMRQWMLKITEYAXXXXXXXXXXXWPESVKEMQRNWIGRSEGAEMDFRVLDSDG 302
            PV ++ + QW L+IT YA           WPE VK MQR WIGRSEGAE+ F V     
Sbjct: 182 TPVEKRELEQWYLRITAYAERLLKDLEGLNWPEKVKAMQRAWIGRSEGAEILFPV----- 236
Query: 303 QERDIKITVYTTRPDTIFGATYLVVAPEHPXXXXXXXXXXXXNIEEYKNLASRKSDLERT 362
           + ++++I V+TTRPDT+FGAT+LV+APEHP             +  Y   A RK+++ER 
Sbjct: 237 EGKEVRIPVFTTRPDTLFGATFLVLAPEHPLTLELAAPEKREEVLAYVEAAKRKTEIERQ 296
Query: 363 ELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDI 422
              +EKTGVF G YA NPA+GE IPIW ADYVL  YGTGAIMAVPAHD RD+EFA KF +
Sbjct: 297 AEGREKTGVFLGAYALNPATGERIPIWTADYVLFGYGTGAIMAVPAHDQRDYEFARKFGL 356
Query: 423 SIHSVV-MPDDESSSQSEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGN 481
            I  V+  P +      E+AY   G++VNS         +G   +E   KVI W E+ G 
Sbjct: 357 PIKKVIERPGEPLPEPLERAYEEPGIMVNSGPF------DGTESEEGKRKVIAWLEEKGL 410
Query: 482 GKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPTG-TG 540
           GK +V Y+LRDWL +RQRYWG PIP+V  +  G  VP+ E ELP+ LP+L D       G
Sbjct: 411 GKGRVTYRLRDWLISRQRYWGTPIPMVHCEACG-VVPVPEEELPVLLPDLKDVEDIRPKG 469
Query: 541 EPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCW 577
           + PL     + +TT    G PA+R+T TM  +  S W
Sbjct: 470 KSPLEAHPEFYETTCPKCGGPAKRDTDTMDTFFDSSW 506
>pdb|1OBH|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed With A Pre-Transfer Editing Substrate Analogue In Both Synthetic Active Site And Editing Site Length = 878 Back     alignment and structure
>pdb|4AQ7|A Chain A, Ternary Complex Of E. Coli Leucyl-Trna Synthetase, Trna(Leu) And Leucyl-Adenylate Analogue In The Aminoacylation Conformation Length = 880 Back     alignment and structure
>pdb|3ZIU|A Chain A, Crystal Structure Of Mycoplasma Mobile Leucyl-trna Synthetase With Leu-ams In The Active Site Length = 637 Back     alignment and structure
>pdb|3ZIU|A Chain A, Crystal Structure Of Mycoplasma Mobile Leucyl-trna Synthetase With Leu-ams In The Active Site Length = 637 Back     alignment and structure
>pdb|3O0A|A Chain A, Crystal Structure Of The Wild Type Cp1 Hydrolitic Domain From Aquifex Aeolicus Leucyl-Trna Length = 219 Back     alignment and structure
>pdb|3PZ0|A Chain A, The Crystal Structure Of Aaleurs-Cp1 Length = 221 Back     alignment and structure
>pdb|3PZ5|A Chain A, The Crystal Structure Of Aaleurs-Cp1-D20 Length = 201 Back     alignment and structure
>pdb|2AJG|A Chain A, Crystal Structure Of The Editing Domain Of E. Coli Leucyl- Trna Synthetase Length = 196 Back     alignment and structure
>pdb|1WKB|A Chain A, Crystal Structure Of Leucyl-Trna Synthetase From The Archaeon Pyrococcus Horikoshii Reveals A Novel Editing Domain Orientation Length = 810 Back     alignment and structure
>pdb|1WZ2|A Chain A, The Crystal Structure Of Leucyl-Trna Synthetase And Trna(Leucine) Complex Length = 967 Back     alignment and structure
>pdb|1QU2|A Chain A, Insights Into Editing From An Ile-Trna Synthetase Structure With Trna(Ile) And Mupirocin Length = 917 Back     alignment and structure
>pdb|1GAX|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna Synthetase Complexed With Trna(Val) And Valyl-Adenylate Analogue Length = 862 Back     alignment and structure
>pdb|1JZQ|A Chain A, Isoleucyl-Trna Synthetase Complexed With Isoleucyl- Adenylate Analogue Length = 821 Back     alignment and structure
>pdb|2CSX|A Chain A, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna Synthetase Complexed With Trna(Met) Length = 497 Back     alignment and structure
>pdb|4DLP|A Chain A, Crystal Structure Of Methionyl-Trna Synthetase Metrs From Brucella Melitensis Bound To Selenomethionine Length = 536 Back     alignment and structure
>pdb|2X1L|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Methionyl-Trna Synthetase In Complex With Methionine And Adenosine Length = 524 Back     alignment and structure
>pdb|1A8H|A Chain A, Methionyl-Trna Synthetase From Thermus Thermophilus Length = 500 Back     alignment and structure
>pdb|2D54|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225a Mutant From Thermus Thermophilus Length = 502 Back     alignment and structure
>pdb|1WOY|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225f Mutant From Thermus Thermophilus Length = 500 Back     alignment and structure
>pdb|3KFL|A Chain A, Leishmania Major Methionyl-Trna Synthetase In Complex With Methionyladenylate And Pyrophosphate Length = 564 Back     alignment and structure
>pdb|1P7P|A Chain A, Methionyl-trna Synthetase From Escherichia Coli Complexed With Methionine Phosphonate Length = 551 Back     alignment and structure
>pdb|1F4L|A Chain A, Crystal Structure Of The E.Coli Methionyl-Trna Synthetase Complexed With Methionine Length = 551 Back     alignment and structure
>pdb|3H9C|A Chain A, Structure Of Methionyl-Trna Synthetase: Crystal Form 2 Length = 547 Back     alignment and structure
>pdb|1QQT|A Chain A, Methionyl-Trna Synthetase From Escherichia Coli Length = 551 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query577
2v0c_A 878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 0.0
4arc_A 880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 0.0
1wkb_A 810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 1e-120
1wz2_A 967 Leucyl-tRNA synthetase; ligase, riken structural g 1e-113
3o0a_A219 Leucyl-tRNA synthetase subunit alpha; CP1 hydrolyt 1e-104
2ajg_A196 Leucyl-tRNA synthetase; editing domain, ligase; 2. 1e-101
1ffy_A 917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 2e-26
1ile_A 821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 2e-25
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 2e-04
1gax_A 862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 3e-25
1gax_A 862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 5e-07
1rqg_A 722 Methionyl-tRNA synthetase; translation, dimerizati 3e-23
3pz6_A311 Leurs, leucyl-tRNA synthetase; editing domain, gll 2e-22
3tun_A542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 3e-19
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 1e-18
3h99_A560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 4e-18
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 8e-18
4dlp_A536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 9e-18
2x1l_A524 Methionyl-tRNA synthetase; nucleotide-binding, pro 3e-17
3kfl_A564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 3e-16
2wfd_A252 Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRN 2e-12
2wfg_A261 Cytosolic leucyl-tRNA synthetase; ligase, editing 4e-12
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
1wka_A147 Valyl-tRNA synthetase; editing, CP1, fidelity, the 2e-07
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Length = 878 Back     alignment and structure
 Score =  913 bits (2361), Expect = 0.0
 Identities = 261/517 (50%), Positives = 334/517 (64%), Gaps = 17/517 (3%)

Query: 64  YPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDI 123
           Y  H IE KWQ +WE     +   ++   + K YVL MFPYPSG  LH+GH   YT  D+
Sbjct: 4   YNPHAIEAKWQRFWEEKGFMKAK-DLPGGRGKQYVLVMFPYPSG-DLHMGHLKNYTMGDV 61

Query: 124 LARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDW 183
           LAR +RMQGY VLHPMGWDAFGLPAE  A++ G HPK  T  NI + +  L+ +G  YDW
Sbjct: 62  LARFRRMQGYEVLHPMGWDAFGLPAENAALKFGVHPKDWTYANIRQAKESLRLMGILYDW 121

Query: 184 NREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGVSER-GG 242
           +RE++T EP YY+W QWIFL++ ++GLAY+A+  VNWCP   TVLANE+VV+G   R   
Sbjct: 122 DREVTTCEPEYYRWNQWIFLKMWEKGLAYRAKGLVNWCPKCQTVLANEQVVEGRCWRHED 181

Query: 243 HPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGRSEGAEMDFRVLDSDG 302
            PV ++ + QW L+IT YA+RLL DL+ L+WPE VK MQR WIGRSEGAE+ F V   + 
Sbjct: 182 TPVEKRELEQWYLRITAYAERLLKDLEGLNWPEKVKAMQRAWIGRSEGAEILFPVEGKEV 241

Query: 303 QERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERT 362
                +I V+TTRPDT+FGAT+LV+APEHPL   L +  + + +  Y   A RK+++ER 
Sbjct: 242 -----RIPVFTTRPDTLFGATFLVLAPEHPLTLELAAPEKREEVLAYVEAAKRKTEIERQ 296

Query: 363 ELQKEKTGVFSGCYARNPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDI 422
              +EKTGVF G YA NPA+GE IPIW ADYVL  YGTGAIMAVPAHD RD+EFA KF +
Sbjct: 297 AEGREKTGVFLGAYALNPATGERIPIWTADYVLFGYGTGAIMAVPAHDQRDYEFARKFGL 356

Query: 423 SIHSVVMPDDESSSQ-SEKAYTGEGLIVNSSNLISGLDINGLSCQEATSKVIEWAEKTGN 481
            I  V+    E   +  E+AY   G++VNS         +G   +E   KVI W E+ G 
Sbjct: 357 PIKKVIERPGEPLPEPLERAYEEPGIMVNSGPF------DGTESEEGKRKVIAWLEEKGL 410

Query: 482 GKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTP-TGTG 540
           GK +V Y+LRDWL +RQRYWG PIP+V  +     VP+ E ELP+ LP+L D       G
Sbjct: 411 GKGRVTYRLRDWLISRQRYWGTPIPMVHCE-ACGVVPVPEEELPVLLPDLKDVEDIRPKG 469

Query: 541 EPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCW 577
           + PL     + +TT    G PA+R+T TM  +  S W
Sbjct: 470 KSPLEAHPEFYETTCPKCGGPAKRDTDTMDTFFDSSW 506
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Length = 880 Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Length = 810 Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Length = 967 Back     alignment and structure
>3o0a_A Leucyl-tRNA synthetase subunit alpha; CP1 hydrolytic DOM ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide- protein biosynthesis; 1.77A {Aquifex aeolicus} PDB: 3pz0_A 3pz5_A Length = 219 Back     alignment and structure
>2ajg_A Leucyl-tRNA synthetase; editing domain, ligase; 2.00A {Escherichia coli} PDB: 2ajh_A 2aji_A Length = 196 Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Length = 917 Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Length = 821 Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Length = 821 Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Length = 862 Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Length = 862 Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Length = 722 Back     alignment and structure
>3pz6_A Leurs, leucyl-tRNA synthetase; editing domain, glleurs_CP1, ligase; 2.60A {Giardia intestinalis} Length = 311 Back     alignment and structure
>3tun_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, translation, nucleotide binding; HET: C13; 2.55A {Trypanosoma brucei} Length = 542 Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Length = 500 Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Length = 560 Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Length = 497 Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Length = 536 Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Length = 524 Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Length = 564 Back     alignment and structure
>2wfd_A Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRNA synthetase, phosphoprotein, editing domain, nucleotide-binding, hydrolysis of MIS-charged trnas; 3.25A {Homo sapiens} Length = 252 Back     alignment and structure
>2wfg_A Cytosolic leucyl-tRNA synthetase; ligase, editing domain, hydrolysis of MIS-charged trnas, benzoxaborole, anti-fungal; HET: ZZB; 2.20A {Candida albicans} PDB: 2wfe_A* Length = 261 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1wka_A Valyl-tRNA synthetase; editing, CP1, fidelity, thermus thrmophilus, translation, amino acid, structural genomics; 1.70A {Thermus thermophilus} SCOP: b.51.1.1 PDB: 1wk9_A* Length = 147 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query577
4arc_A 880 Leucine--tRNA ligase; ligase-RNA complex, nucleoti 100.0
2v0c_A 878 Aminoacyl-tRNA synthetase; ligase, nucleotide-bind 100.0
1ffy_A 917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 100.0
1ile_A 821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 100.0
1gax_A 862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 100.0
1wz2_A 967 Leucyl-tRNA synthetase; ligase, riken structural g 100.0
1wkb_A 810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 100.0
3u1f_A542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 100.0
1rqg_A 722 Methionyl-tRNA synthetase; translation, dimerizati 100.0
3o0a_A219 Leucyl-tRNA synthetase subunit alpha; CP1 hydrolyt 100.0
2ajg_A196 Leucyl-tRNA synthetase; editing domain, ligase; 2. 100.0
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 100.0
2x1l_A524 Methionyl-tRNA synthetase; nucleotide-binding, pro 100.0
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 100.0
3h99_A560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 100.0
1wny_A186 Isoleucyl-tRNA synthetase; ligase, structural geno 100.0
3kfl_A564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 100.0
4dlp_A536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 100.0
1wka_A147 Valyl-tRNA synthetase; editing, CP1, fidelity, the 100.0
2wfd_A252 Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRN 99.96
2wfg_A261 Cytosolic leucyl-tRNA synthetase; ligase, editing 99.96
3pz6_A311 Leurs, leucyl-tRNA synthetase; editing domain, gll 99.95
3tqo_A462 Cysteinyl-tRNA synthetase; protein synthesis, liga 99.88
3sp1_A501 Cysteinyl-tRNA synthetase; structural genomics, se 99.87
3c8z_A414 Cysteinyl-tRNA synthetase; cysteine ligase, rossma 99.83
1li5_A461 Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys 99.78
1irx_A523 Lysyl-tRNA synthetase; beta sandwitch, zinc-bindin 99.46
2zue_A629 Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase 99.4
1iq0_A592 Arginyl-tRNA synthetase; riken structural genomics 99.38
1f7u_A607 Arginyl-tRNA synthetase; RNA-protein complex, amin 99.22
3fnr_A464 Arginyl-tRNA synthetase; transferase, PSI-2, NYSGX 99.04
1nzj_A298 Hypothetical protein YADB; Zn cluster, glutamyl T- 98.34
3aii_A553 Glutamyl-tRNA synthetase; amino-acyl tRNA syntheta 98.15
1qtq_A553 GLNRS, protein (glutaminyl-tRNA synthetase); gluta 98.1
2o5r_A481 Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g 98.05
3al0_C592 Glutamyl-tRNA(Gln) amidotransferase subunit C, GL 97.99
2hz7_A 851 Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c 97.95
2cfo_A492 Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA s 97.84
4g6z_A490 Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, 97.83
3afh_A488 Glutamyl-tRNA synthetase 2; protein-substrate comp 97.57
1j09_A468 Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, r 97.53
2ja2_A498 Glutamyl-tRNA synthetase; non-discriminating gluta 97.45
4gri_A512 Glutamate--tRNA ligase; structural genomics, seatt 97.41
1rqg_A 722 Methionyl-tRNA synthetase; translation, dimerizati 97.24
3kfl_A 564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 97.1
2x1l_A 524 Methionyl-tRNA synthetase; nucleotide-binding, pro 96.41
3u1f_A 542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 96.26
4dlp_A 536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 95.91
2d5b_A 500 Methionyl-tRNA synthetase; rossmann fold, class 1A 95.29
3h99_A 560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 95.23
2csx_A 497 Methionyl-tRNA synthetase; ligase, riken structura 94.79
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 89.67
1wkb_A810 Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, e 88.93
3tzl_A322 Tryptophanyl-tRNA synthetase; structural genomics, 87.81
3hv0_A393 Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-bin 87.63
3foc_A451 Tryptophanyl-tRNA synthetase; structural genomics, 86.13
1gax_A 862 Valrs, valyl-tRNA synthetase; protein-RNA complex, 85.79
2dlc_X394 Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligas 85.1
2cyb_A323 Tyrosyl-tRNA synthetase; rossmann-fold, structural 84.85
1ffy_A 917 Isoleucyl-tRNA synthetase; protein-RNA complex, me 84.03
3hzr_A386 Tryptophanyl-tRNA synthetase; APO tRNA-ligase, str 82.81
1i6k_A328 TRPRS, tryptophanyl-tRNA synthetase; class I tRNA 81.31
2cya_A364 Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, st 80.6
3jxe_A392 Tryptophanyl-tRNA synthetase; adenosine triphospha 80.45
>4arc_A Leucine--tRNA ligase; ligase-RNA complex, nucleotide-binding, protein biosynthesis I aminoacyl-tRNA synthetase, ATP-binding; 2.00A {Escherichia coli} PDB: 4aq7_A 4ari_A* 4as1_A* Back     alignment and structure
Probab=100.00  E-value=2.8e-119  Score=1036.94  Aligned_cols=496  Identities=47%  Similarity=0.842  Sum_probs=411.3

Q ss_pred             cccCCCchhhhHHHHHHHHHCCCccCCCCCCCCCCcEEEEcCCCCCCCCCCCcchhhHhHHHHHHHHHHHHcCCcccCcc
Q 008100           60 VKRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPM  139 (577)
Q Consensus        60 ~~~~y~~~~iE~~~~~~W~~~~~f~~~~~~~~~~~~f~i~~~pPypng~~LHiGHa~~~v~~Dvi~Ry~rm~G~~V~~~~  139 (577)
                      |.+.|||.++|++||++|+++++|++..  +.++++||+++|||||||. |||||+++++++|+++||+||+||+|++++
T Consensus        21 m~~~y~~~~iE~kw~~~W~~~~~f~~~~--~~~~~~~~v~~~~PypnG~-lHiGHa~~~~~~DvlaRy~rm~G~~V~~~~   97 (880)
T 4arc_A           21 MQEQYRPEEIESKVQLHWDEKRTFEVTE--DESKEKYYCLSMLPYPSGR-LHMGHVRNYTIGDVIARYQRMLGKNVLQPI   97 (880)
T ss_dssp             CCSSCCHHHHHHHHHHHHHHTTTTCCCC--CTTSCEEEEEECCCCCCSS-CCHHHHHHHHHHHHHHHHHHHTTCEEECCC
T ss_pred             ccccCChHHHHHHHHHHHHhcCCcccCC--cCCCCCEEEEcCCCCCCCC-cchhhhHHHHHHHHHHHHHHHcCCceEEec
Confidence            6788999999999999999999999763  4578899999999999998 999999999999999999999999999999


Q ss_pred             cccccChHHHHHHHHhCCCchhhHHHHHHHHHHHHHHhCCCCCCCCceeCCChhhHHHHHHHHHHHHHCCceeeeccCcc
Q 008100          140 GWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVN  219 (577)
Q Consensus       140 G~D~~Glpie~~a~~~g~~~~~~~~~~~~~~~~~l~~lGi~~Dw~~~~~T~d~~~~~~v~~~f~~L~~kGliy~~~~~v~  219 (577)
                      |||+||+|||.+|++.|+.+++++.++++.|++||++||+++||+++++|+|+.|++.++++|.+|+++|+||++.++|+
T Consensus        98 G~D~~Glpie~~a~~~g~~p~~~~~~~i~~~~~~l~~LGis~Dw~~~~~T~d~~~~~~v~~~f~~L~ekGliY~~~~~v~  177 (880)
T 4arc_A           98 GWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVN  177 (880)
T ss_dssp             EECCCSTHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHTTCCCCGGGCEETTSHHHHHHHHHHHHHHHHTTCEEEEEECC-
T ss_pred             CccccCcHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhCCCcCCCCCEEcCCHHHHHHHHHHHHHHHHCCCEEEeceeEe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCccCCchhhccCccccCCcCeEEEecccchhhHhhhhHHHhhccCCC-CCCHHHHHHHHHhhhccCCceEEEEee
Q 008100          220 WCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRLLDDLDDL-DWPESVKEMQRNWIGRSEGAEMDFRVL  298 (577)
Q Consensus       220 wc~~~~t~Ls~~Ev~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~l~~~l~~~-~~p~~~~~~~~~~i~~~~~~~~~f~l~  298 (577)
                      |||.|+|+||++||++|+|++||.+++.++++||||+|++|+++|+++++.+ .||++++.||+||||++.|++++|++.
T Consensus       178 wcp~~~t~La~~ev~~g~~~~~g~~ve~~~~~~~f~~i~~y~~~Ll~~l~~~~~wp~~v~~~~~~wig~s~g~~v~f~~~  257 (880)
T 4arc_A          178 WCPNDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLNDLDKLDHWPDTVKTMQRNWIGRSEGVEITFNVN  257 (880)
T ss_dssp             -----------------------------CEEEEEECGGGGHHHHHHHGGGCTTSCHHHHHHHHHHHCEEEEEEEEEEET
T ss_pred             ecCCcCCEecchhhhcCcCcCCCCccEEEEccceEEeechhHHHHHHHHhhcccccHHHHHHHHhhhccccceEEEEEec
Confidence            9999999999999999999999999999999999999999999999999987 599999999999999999999999996


Q ss_pred             cCCCCCccceEEEecCCCCccccCcEEEEcCCCccchhhccccchhhHHHHHHHHhcccchhhhhhhhcccccccceEEe
Q 008100          299 DSDGQERDIKITVYTTRPDTIFGATYLVVAPEHPLLSSLVSTTQSQNIEEYKNLASRKSDLERTELQKEKTGVFSGCYAR  378 (577)
Q Consensus       299 ~~~~~~~~~~l~iwTT~P~Tl~an~av~V~p~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~  378 (577)
                      +.     +.+|+|||||||||+|++||||||+++|+..++..+  ..+++|+..+...+..+......++.|.++|.++.
T Consensus       258 ~~-----~~~i~v~TTrP~Tl~g~t~vav~Pe~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~  330 (880)
T 4arc_A          258 DY-----DNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENN--PELAAFIDECRNTKVAEAEMATMEKKGVDTGFKAV  330 (880)
T ss_dssp             TC-----SSEEEEEESCGGGGGGCCEEEECTTCHHHHHHGGGC--HHHHHHHTC----------------CEEEEEEEEE
T ss_pred             CC-----CceEEEEeCCchhhcCCeEEEECCCcHHHHHHhcCh--HHHHHHHHHHhccCchhhhhccceeeccccCcEEe
Confidence            42     468999999999999999999999999988776432  23455544333222222222233567889999999


Q ss_pred             cCCCCCeeeEEeecccccCCCCCceeccCCCChhhHHHHHHcCCeeEEeecCCCCC-CccccccccccceEeccCccccc
Q 008100          379 NPASGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDHEFALKFDISIHSVVMPDDES-SSQSEKAYTGEGLIVNSSNLISG  457 (577)
Q Consensus       379 ~P~~~~~ipIi~~d~V~~~~GTGiVh~aPaHg~~Dy~~~~k~~L~i~~~v~~~~~~-~~~~~~~~~~~g~~v~~~~~~~~  457 (577)
                      ||++++.+||+.++||++++|||+||+|||||++||++|++||||++++|++.++. .....+.|.+.|.++++.     
T Consensus       331 ~P~~~~~ipi~~~~yV~~~~GTGaV~~~Pahd~~D~~~~~~~~Lpi~~vi~~~~~~~~~~~~~~~~~~g~~~ns~-----  405 (880)
T 4arc_A          331 HPLTGEEIPVWAANFVLMEYGTGAVMAVPGHDQRDYEFASKYGLNIKPVILAADGSEPDLSQQALTEKGVLFNSG-----  405 (880)
T ss_dssp             CTTTCCEEEEEEETTSCSSSTTSEEEECTTTCHHHHHHHHHHTCCCCCCBCCTTSCCCCCSSSCCCSCCCBCSSG-----
T ss_pred             cCCCCCEeEEEEeCccccCCCCceEEEccCCCHHHHHHHHHcCCCceEeeccCcccccccccccccCCceeecCc-----
Confidence            99999999999999999999999999999999999999999999999999865331 111235688888887654     


Q ss_pred             cccCCCCHHHHHHHHHHHHHhcCCCceeeeeccCcccccCcCccccccceEEECCCCeeeecCCCCCCCCCCCCCCcCCC
Q 008100          458 LDINGLSCQEATSKVIEWAEKTGNGKKKVNYKLRDWLFARQRYWGEPIPVVFLDGTGETVPLHEAELPLTLPELDDFTPT  537 (577)
Q Consensus       458 ~~~~g~~~~~a~~~ii~~l~~~g~~~~~~~~~~~DWcISRQR~WG~PIPv~~~~~~g~~~~~~~~~l~~~l~~~~~~~~~  537 (577)
                       .++||...+|+.+|+++|.+.|.+.+.++|++||||||||||||+|||||||++|| .+++++++||+.||+...+  .
T Consensus       406 -~~~Gl~~~eA~~~ii~~L~~~g~~~~~v~yrlrDW~iSRQRyWG~PIPi~~c~~cg-~v~v~~~~Lpv~lp~~~~~--~  481 (880)
T 4arc_A          406 -EFNGLDHEAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGT-VMPTPDDQLPVILPEDVVM--D  481 (880)
T ss_dssp             -GGTTCCHHHHHHHHHHHHHHTTSEEEEEEESCCCEECEESCSSSCBCCEEEETTSC-EEECCGGGCSCCCCSSCCC--C
T ss_pred             -ccCCCCHHHHHHHHHHHHHHcCCcceeEEEEcccceeeeeeccCCcceEEEECCCC-eEeCChHHCccccchhccc--C
Confidence             59999999999999999999999999999999999999999999999999999998 5678999999999974334  4


Q ss_pred             CCCCCcCccCccccccccCCCCCCcccccCcccccccCCC
Q 008100          538 GTGEPPLSKAVSWVQTTEHSSGKPARRETSTMPQWAGSCW  577 (577)
Q Consensus       538 G~~~~~l~~~~~~v~~~~~~~g~~~~R~tDtmD~WfdSsW  577 (577)
                      |.+ +||..+.+|+.++||  |+.++||||||||||||||
T Consensus       482 ~~g-~pl~~~~~w~~~~cp--g~~~~retDtmDtw~dSsw  518 (880)
T 4arc_A          482 GIT-SPIKADPEWAKTTVN--GMPALRETDTFDTFMESSW  518 (880)
T ss_dssp             SSS-CHHHHSTTTTEEESS--SSEEEECCCEECTTTGGGT
T ss_pred             CCC-CchHhCccceeeccC--CCcceeCCCcCCCcccCcH
Confidence            444 689889999999998  8889999999999999999
>2v0c_A Aminoacyl-tRNA synthetase; ligase, nucleotide-binding, protein biosynthesis; HET: LMS ANZ; 1.85A {Thermus thermophilus} PDB: 1h3n_A* 1obc_A* 1obh_A* 2bte_A* 2byt_A 2v0g_A* Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Back     alignment and structure
>1wz2_A Leucyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiativ structural genomics, ligase-RNA complex; 3.21A {Pyrococcus horikoshii} Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Back     alignment and structure
>3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A* Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Back     alignment and structure
>3o0a_A Leucyl-tRNA synthetase subunit alpha; CP1 hydrolytic DOM ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide- protein biosynthesis; 1.77A {Aquifex aeolicus} PDB: 3pz0_A 3pz5_A Back     alignment and structure
>2ajg_A Leucyl-tRNA synthetase; editing domain, ligase; 2.00A {Escherichia coli} PDB: 2ajh_A 2aji_A Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Back     alignment and structure
>1wny_A Isoleucyl-tRNA synthetase; ligase, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.60A {Thermus thermophilus} PDB: 1wnz_A* 1wk8_A* 1udz_A 1ue0_A Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Back     alignment and structure
>1wka_A Valyl-tRNA synthetase; editing, CP1, fidelity, thermus thrmophilus, translation, amino acid, structural genomics; 1.70A {Thermus thermophilus} SCOP: b.51.1.1 PDB: 1wk9_A* Back     alignment and structure
>2wfd_A Leucyl-tRNA synthetase, cytoplasmic; aminoacyl-tRNA synthetase, phosphoprotein, editing domain, nucleotide-binding, hydrolysis of MIS-charged trnas; 3.25A {Homo sapiens} Back     alignment and structure
>2wfg_A Cytosolic leucyl-tRNA synthetase; ligase, editing domain, hydrolysis of MIS-charged trnas, benzoxaborole, anti-fungal; HET: ZZB; 2.20A {Candida albicans} PDB: 2wfe_A* Back     alignment and structure
>3pz6_A Leurs, leucyl-tRNA synthetase; editing domain, glleurs_CP1, ligase; 2.60A {Giardia intestinalis} Back     alignment and structure
>3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii} Back     alignment and structure
>3sp1_A Cysteinyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, LYME disease; HET: AMP; 2.55A {Borrelia burgdorferi} Back     alignment and structure
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis} Back     alignment and structure
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B Back     alignment and structure
>1irx_A Lysyl-tRNA synthetase; beta sandwitch, zinc-binding structure, rossmann fold, alpha-helix CAGE; 2.60A {Pyrococcus horikoshii} SCOP: a.97.1.2 c.26.1.1 Back     alignment and structure
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Back     alignment and structure
>1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Back     alignment and structure
>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Back     alignment and structure
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Back     alignment and structure
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A* Back     alignment and structure
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A Back     alignment and structure
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} Back     alignment and structure
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} Back     alignment and structure
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus} Back     alignment and structure
>4g6z_A Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, AARS, class 1B AARS, ATP-dependen charging, protein synthesis, structural genomics; HET: GLU; 2.05A {Burkholderia thailandensis} Back     alignment and structure
>3afh_A Glutamyl-tRNA synthetase 2; protein-substrate complex, aminoacyl-tRNA synthetase, ATP-binding, ligase, nucleotide-binding; HET: GSU; 2.00A {Thermotoga maritima} PDB: 3akz_B* Back     alignment and structure
>1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A Back     alignment and structure
>2ja2_A Glutamyl-tRNA synthetase; non-discriminating glutamyl-tRNA aminoacylation, protein biosynthesis, aminoacyl-tRNA synthetase, ligase; 1.65A {Mycobacterium tuberculosis} PDB: 3pny_A 3pnv_A Back     alignment and structure
>4gri_A Glutamate--tRNA ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, aminoacyl-tRNA synthetase; HET: GLU; 2.60A {Borrelia burgdorferi} Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Back     alignment and structure
>3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A* Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Back     alignment and structure
>1wkb_A Leucyl-tRNA synthetase; leucine, aminoacyl-tRNA, editing, amino acid, aminoacylation, trnaLeu, structural genomics; 2.05A {Pyrococcus horikoshii} Back     alignment and structure
>3tzl_A Tryptophanyl-tRNA synthetase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure; HET: ADP TRP; 2.15A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3m5w_A* Back     alignment and structure
>3hv0_A Tryptophanyl-tRNA synthetase; tRNA-ligase, ATP-binding, aminoacyl-tRNA synthetase, ligase, nucleotide-binding; HET: TRP; 2.42A {Cryptosporidium parvum iowa II} SCOP: c.26.1.0 Back     alignment and structure
>3foc_A Tryptophanyl-tRNA synthetase; structural genomics, giardiasi aminoacyl-tRNA synthetase, ligase; 2.09A {Giardia lamblia atcc 50803} Back     alignment and structure
>1gax_A Valrs, valyl-tRNA synthetase; protein-RNA complex, rossmann fold, coiled coil, riken structural genomics/proteomics initiative, RSGI; HET: VAA; 2.90A {Thermus thermophilus} SCOP: a.2.7.3 a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1ivs_A* 1iyw_A Back     alignment and structure
>2dlc_X Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligase-tRNA complex; HET: 2MG OMG M2G PSU 6IA 5MC 5MU 1MA YMP; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2cyb_A Tyrosyl-tRNA synthetase; rossmann-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TYR; 1.80A {Archaeoglobus fulgidus} Back     alignment and structure
>1ffy_A Isoleucyl-tRNA synthetase; protein-RNA complex, metal IONS, editing tRNA synthetase, double-sieve, ligase/RNA, mupiroci; HET: MRC; 2.20A {Staphylococcus aureus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1qu2_A* 1qu3_A* Back     alignment and structure
>3hzr_A Tryptophanyl-tRNA synthetase; APO tRNA-ligase, structural genomics, medical structural GEN pathogenic protozoa, MSGPP, ligase; 3.00A {Entamoeba histolytica} Back     alignment and structure
>1i6k_A TRPRS, tryptophanyl-tRNA synthetase; class I tRNA synthetase, AARS, induced FIT, ligase; HET: TYM; 1.72A {Geobacillus stearothermophilus} SCOP: c.26.1.1 PDB: 1i6l_A* 1i6m_A* 1m83_A* 1mau_A* 1maw_A* 1mb2_A* 2ov4_A* 3fhj_A* 3fi0_A* 1d2r_A 3u1v_A Back     alignment and structure
>2cya_A Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, structural genomics, NPPSFA, national on protein structural and functional analyses; 2.20A {Aeropyrum pernix} Back     alignment and structure
>3jxe_A Tryptophanyl-tRNA synthetase; adenosine triphosphate, rossmann fold, crystallography, X-RAY, P. horikoshii, aminoacyl-tRNA synthetase; HET: TYM; 3.00A {Pyrococcus horikoshii} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 577
d1h3na3494 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetas 7e-67
d1h3na3 494 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetas 2e-08
d1ilea3452 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthe 4e-50
d1ilea3 452 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthe 1e-04
d1ivsa4425 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase 3e-49
d1pfva2350 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthe 1e-48
d1ffya3450 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthe 5e-43
d1ffya3 450 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthe 6e-05
d1h3na2192 b.51.1.1 (A:226-417) Leucyl-tRNA synthetase (LeuRS 2e-41
d1rqga2361 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthe 5e-37
d2d5ba2348 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetR 6e-37
d1ffya2194 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (Il 5e-22
d1udza_179 b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {T 3e-15
d1wkaa1143 b.51.1.1 (A:195-337) Valyl-tRNA synthetase (ValRS) 3e-11
d1irxa2317 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase { 2e-09
d1li5a2315 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysR 4e-08
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 494 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Leucyl-tRNA synthetase (LeuRS)
species: Thermus thermophilus [TaxId: 274]

 Score =  223 bits (569), Expect = 7e-67
 Identities = 122/225 (54%), Positives = 155/225 (68%), Gaps = 3/225 (1%)

Query: 64  YPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDI 123
           Y  H IE KWQ +WE     +   ++   + K YVL MFPYPSG  LH+GH   YT  D+
Sbjct: 4   YNPHAIEAKWQRFWEEKGFMK-AKDLPGGRGKQYVLVMFPYPSGD-LHMGHLKNYTMGDV 61

Query: 124 LARLKRMQGYNVLHPMGWDAFGLPAEQYAIETGTHPKITTLRNINRFRTQLKSLGFSYDW 183
           LAR +RMQGY VLHPMGWDAFGLPAE  A++ G HPK  T  NI + +  L+ +G  YDW
Sbjct: 62  LARFRRMQGYEVLHPMGWDAFGLPAENAALKFGVHPKDWTYANIRQAKESLRLMGILYDW 121

Query: 184 NREISTIEPAYYKWTQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDGV-SERGG 242
           +RE++T EP YY+W QWIFL++ ++GLAY+A+  VNWCP   TVLANE+VV+G       
Sbjct: 122 DREVTTCEPEYYRWNQWIFLKMWEKGLAYRAKGLVNWCPKCQTVLANEQVVEGRCWRHED 181

Query: 243 HPVIRKPMRQWMLKITEYADRLLDDLDDLDWPESVKEMQRNWIGR 287
            PV ++ + QW L+IT YA+RLL DL+ L+WPE VK MQR WIGR
Sbjct: 182 TPVEKRELEQWYLRITAYAERLLKDLEGLNWPEKVKAMQRAWIGR 226
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 494 Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 452 Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 452 Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 425 Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Length = 350 Back     information, alignment and structure
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 450 Back     information, alignment and structure
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 450 Back     information, alignment and structure
>d1h3na2 b.51.1.1 (A:226-417) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Length = 192 Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Length = 361 Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Length = 348 Back     information, alignment and structure
>d1ffya2 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Length = 194 Back     information, alignment and structure
>d1udza_ b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Length = 179 Back     information, alignment and structure
>d1wkaa1 b.51.1.1 (A:195-337) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Length = 143 Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 317 Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Length = 315 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query577
d1ffya3450 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 100.0
d1h3na3494 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 100.0
d1ilea3452 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 100.0
d1ivsa4425 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 100.0
d1h3na2192 Leucyl-tRNA synthetase (LeuRS) {Thermus thermophil 100.0
d1wkaa1143 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 100.0
d1udza_179 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 100.0
d1pfva2350 Methionyl-tRNA synthetase (MetRS) {Escherichia col 99.98
d1ffya2194 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 99.97
d1rqga2361 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 99.96
d2d5ba2348 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 99.95
d1li5a2315 Cysteinyl-tRNA synthetase (CysRS) {Escherichia col 99.69
d1irxa2317 Class I lysyl-tRNA synthetase {Archaeon Pyrococcus 99.12
d1f7ua2348 Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Sa 98.83
d1iq0a2370 Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi 98.62
d1j09a2305 Glutamyl-tRNA synthetase (GluRS) {Thermus thermoph 98.11
d1nzja_286 Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia c 97.47
d1gtra2331 Glutaminyl-tRNA synthetase (GlnRS) {Escherichia co 97.46
d1rqga2361 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 96.65
d1r6ta2386 Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo 82.81
d2ts1a_319 Tyrosyl-tRNA synthetase (TyrRS) {Bacillus stearoth 82.79
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Isoleucyl-tRNA synthetase (IleRS)
species: Staphylococcus aureus [TaxId: 1280]

Probab=100.00  E-value=2.7e-58  Score=498.26  Aligned_cols=204  Identities=29%  Similarity=0.496  Sum_probs=188.4

Q ss_pred             cccCCCchhhhHHHHHHHHHCCCccCCCCCCCCCCcEEEEcCCCCCCCCCCCcchhhHhHHHHHHHHHHHHcCCcccCcc
Q 008100           60 VKRAYPFHEIEPKWQSYWENNRTFRTPDEIDTSKPKFYVLDMFPYPSGAGLHVGHPLGYTATDILARLKRMQGYNVLHPM  139 (577)
Q Consensus        60 ~~~~y~~~~iE~~~~~~W~~~~~f~~~~~~~~~~~~f~i~~~pPypng~~LHiGHa~~~v~~Dvi~Ry~rm~G~~V~~~~  139 (577)
                      ++.++|+.++|++||++|+++++|++..+.+.++++|+|++||||+||. ||||||++++++||++||+||+||+|++++
T Consensus        14 f~~~~~~~~~E~~~~~~W~~~~~~~~~~~~~~~~~~f~~~~~pPy~nG~-lHiGH~~~~~~~Dv~~Ry~rm~G~~V~~~~   92 (450)
T d1ffya3          14 FPMRGGLPNKEPQIQEKWDAEDQYHKALEKNKGNETFILHDGPPYANGN-LHMGHALNKILKDFIVRYKTMQGFYAPYVP   92 (450)
T ss_dssp             CCSSCCHHHHHHHHHHHHHHTTHHHHHHHHTTTSCBCCEECCCCBSSSC-CCHHHHHHHHHHHHHHHHHHTTTCBCCCCC
T ss_pred             CCCCCChHHHHHHHHHHHHHCCCccccccccCCCCcEEEecCCCCCCCc-hhhhHHHHHHHHHHHHHHHHhcCCcccccc
Confidence            4456789999999999999999998765556677899999999999998 999999999999999999999999999999


Q ss_pred             cccccChHHHHHHHHhCCCchh------------hHHHHHHHHHHHHHHhCCCCCCCCceeCCChhhHHHHHHHHHHHHH
Q 008100          140 GWDAFGLPAEQYAIETGTHPKI------------TTLRNINRFRTQLKSLGFSYDWNREISTIEPAYYKWTQWIFLQLLK  207 (577)
Q Consensus       140 G~D~~Glpie~~a~~~g~~~~~------------~~~~~~~~~~~~l~~lGi~~Dw~~~~~T~d~~~~~~v~~~f~~L~~  207 (577)
                      ||||||+|||.++++.+..+++            ++.++++.+++++++||+++||+++|.|+++.|.+.++++|.+|++
T Consensus        93 G~D~~G~pie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~D~~~~~~T~~~~~~~~v~~~f~~l~~  172 (450)
T d1ffya3          93 GWDTHGLPIEQALTKKGVDRKKMSTAEFREKCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMAD  172 (450)
T ss_dssp             EEBCCSHHHHHHHHHHTCCSTTTCHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSCTTSCEETTSHHHHHHHHHHHHHHHH
T ss_pred             ccccCCcHHHHHHHhhCCccccccHHHHhhhcchhhhhhhhhHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHH
Confidence            9999999999999988876543            3567788999999999999999999999999999999999999999


Q ss_pred             CCceeeeccCcccCCCCCccCCchhhccCccccCCcCeEEEecccchhhHhhhhHHH
Q 008100          208 RGLAYQAEVPVNWCPALGTVLANEEVVDGVSERGGHPVIRKPMRQWMLKITEYADRL  264 (577)
Q Consensus       208 kGliy~~~~~v~wc~~~~t~Ls~~Ev~~~~~~~~~~~~~~~~~~~~~~~l~~y~~~l  264 (577)
                      +|+||++.++|+|||.|+|+|++.|++++.|.+|+.+++.+..+|||+++..+++.+
T Consensus       173 ~G~iy~~~~~v~~~p~~~~~~~~~e~~~~~~~r~~~~~~~~~~~qwf~~~~~~~~~~  229 (450)
T d1ffya3         173 KGLIYKGKKPVYWSPSSESSLAEAEIEYPHDWRTKKPVIFRATPQWFASISKVRQDI  229 (450)
T ss_dssp             TTCEEEEEEEEEEETTTTEECCGGGEEEEEETTTCCBCEEEEEEEEEECHHHHHHHH
T ss_pred             cCCeeccccccccccccCcccccccccccccccccCCceeeccccceeccccccccc
Confidence            999999999999999999999999999999999999999999999999987665543
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1h3na2 b.51.1.1 (A:226-417) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1wkaa1 b.51.1.1 (A:195-337) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1udza_ b.51.1.1 (A:) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ffya2 b.51.1.1 (A:201-394) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1r6ta2 c.26.1.1 (A:82-467) Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2ts1a_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} Back     information, alignment and structure