Citrus Sinensis ID: 008469

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560----
MAASLNISSPSTSALSSPPACRNVKFVSGFPSTKSLLANGHSSYLAFVKLATKSSISIKGVGKTRATLISGEGDLLAYPNGNNLVAESTGADDQLVGIELQPDAIAFGALAADTAPTTFGFSSDDDEFDLDSPTEGFSSIPEAIEDIRQGKFVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNGRLTNLINGNGKPSIKSSSDTVSDS
cccccccccccccccccccccccEEEEccccccccccccccccccEEEEcccccEEEEcccccEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccEEEEEEcccccccccHHHHcccccHHHHHHHHHHcccEEEccccHHHHHHccccccccccccccccccccEEEEEccccccccccHHHHHHHHHHHHccccccccccccccccccccccccEEEccccHHHHHHHHHHHcccccEEEEEEEccccccccHHHHHHHHHHccccEEEHHHHHHHHHHccccEEEEEEEccccccccEEEEEEEEcccccEEEEEEccccccccccEEEEcccccccccccccccccHHHHHHHHHHHHHHccEEEEEEcccccccccHHHHHHHHHHHHcccccHHHHHHcccccccccHHHHHHHHHHcccccEEEccccHHHHcccccccEEEEEEEEccccccHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccc
cccccccccccccccccccccccEEEEcccccccEEEEccccccEEEEEcccccccEEcccccEEEEEEEccccccEcccccccEccccccccccccEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccEEEEccccccccEEEEEEHHHccHHHHHHHHHHEccccEEEEcHHHHHHccccEccccccccccccEEccEEEcccccccccccHHHHHHHHHHHHcccccHHHEEEEEEEEEEEccccHHHccccHHHHHHHHHHHcccccEEEEEEEEEccccccccHHHHHHHHHccccEEEHHHHHHHHHHHccHEEEEEEEccccccccEEEEEEEEEccccEEEEEEEccccccccEEEEEEccccccccccccccccHHHHHHHHHHHHHcccEEEEEEcccccccHHHHHHHHHHHHHHccccHHHHHHHccccHcHHHHcHHHHHHHHHcccEEEEEEccccHEEccccccEEEEccccEEEcccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccc
maaslnisspstsalssppacrnvkfvsgfpstksllangHSSYLAFVKLATKssisikgvGKTRATLIsgegdllaypngnnlvaestgaddqlvgielqPDAIAFGalaadtapttfgfssdddefdldsptegfssipEAIEDIRQGKFVVVvddedrenegDLIMAAQLATPEAMAFIVKHGTGIVcvsmkgedlerldlplmvaqkeNDEKLCTAFTVtvdakhgtttgvsarDRATTVLTLasrdskpgdfnrpghifplkyreggvlkraghteaSVDLAVLAGFDPAAVLCEvvdddgsmarlPKLREFAKRENLKIISIADLIRYRRKRdklvdrssaariptmwgpfTAYCYRSILDGIEHIAMvkgdigdgqDILVRVHSecltgdifgsarcdcGDQLALAMQQIEAAGRGVLVYLRghegrgiglgHKLRaynlqddgrdtveaneelglpvdsreygigAQMLRDLGVRTMklmtnnpskyvglkgyglavagrvplitpikKENKRYLETKRAKMghiyglesngrltnlingngkpsiksssdtvsds
maaslnisspstsalssppaCRNVKFVSGFPSTKSLLANGHSSYLAFVKLATkssisikgvgkTRATLISGEGDLLAYPNGNNLVAESTGADDQLVGIELQPDAIAFGALAADTAPTTFGFSSDDDEFDLDSPTEGFSsipeaiedirqGKFVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVtvdakhgtttgvsardraTTVLTlasrdskpgdfnrpghifPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKlrefakrenlkiisiadliryrrkrdklvdrssaariptmwgpfTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANeelglpvdsreygiGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVagrvplitpikkenkrylETKRAKMGHIYGLESNGRLTNLingngkpsiksssdtvsds
MaaslnisspstsalssppaCRNVKFVSGFPSTKSLLANGHSSYLAFVKLATKSSISIKGVGKTRATLISGEGDLLAYPNGNNLVAESTGADDQLVGIELQPDAIAFGALAADTAPTTfgfssdddefdldsPTEGFSSIPEAIEDIRQGKFvvvvddedrenegdLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNGRLTNLINGNGKPsiksssdtvsds
**********************NVKFVSGFPSTKSLLANGHSSYLAFVKLATKSSISIKGVGKTRATLISGEGDLLAYPNGNNLVAESTGADDQLVGIELQPDAIAFGALAADTAPTTFGF*********************AIEDIRQGKFVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTL***********RPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDG********ELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNGRLTNL*******************
****************SPPACRNVKFVSGFPSTKSLLANGHSSYLAFVKLATKSSISIKGVGKTRATLISGEGDLLAY***********************************TAPTTFGFSSDD******S*TEGFSSIPEAIEDIRQGKFVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNG************************
*******************ACRNVKFVSGFPSTKSLLANGHSSYLAFVKLATKSSISIKGVGKTRATLISGEGDLLAYPNGNNLVAESTGADDQLVGIELQPDAIAFGALAADTAPTTFGFSSDDDEFDLDSPTEGFSSIPEAIEDIRQGKFVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNGRLTNLINGNGK*************
***************SSPPACRNVKFVSGFPSTKSLLANGHSSYLAFVKLATKSSISIKGVGKTRATLISGEGDLLAYPNGNNLVAESTGADDQLVGIELQPDAIAFGALAADTAPTTFGFSSDD**FDLDSPTEGFSSIPEAIEDIRQGKFVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGL****************************
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MAASLNISSPSTSALSSPPACRNVKFVSGFPSTKSLLANGHSSYLAFVKLATKSSISIKGVGKTRATLISGEGDLLAYPNGNNLVAESTGADDQLVGIELQPDAIAFGALAADTAPTTFGFSSDDDEFDLDSPTEGFSSIPEAIEDIRQGKFVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNGRLTNLINGNGKPSIKSSSDTVSDS
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query564 2.2.26 [Sep-21-2011]
P47924543 Riboflavin biosynthesis p yes no 0.872 0.906 0.806 0.0
Q0AXM5398 Riboflavin biosynthesis p yes no 0.696 0.987 0.614 1e-139
O66679406 Riboflavin biosynthesis p yes no 0.702 0.975 0.585 1e-135
Q5YTP3414 Riboflavin biosynthesis p yes no 0.698 0.951 0.600 1e-134
C0ZZE5424 Riboflavin biosynthesis p yes no 0.698 0.929 0.594 1e-132
A4X639400 Riboflavin biosynthesis p yes no 0.703 0.992 0.573 1e-132
A8LY38420 Riboflavin biosynthesis p yes no 0.700 0.940 0.574 1e-132
B1MCA4417 Riboflavin biosynthesis p yes no 0.698 0.944 0.594 1e-132
Q0S0K2417 Riboflavin biosynthesis p yes no 0.698 0.944 0.592 1e-131
Q9Z734418 Riboflavin biosynthesis p yes no 0.705 0.952 0.562 1e-131
>sp|P47924|RIBBA_ARATH Riboflavin biosynthesis protein ribBA, chloroplastic OS=Arabidopsis thaliana GN=RIBBA PE=2 SV=2 Back     alignment and function desciption
 Score =  820 bits (2118), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/495 (80%), Positives = 440/495 (88%), Gaps = 3/495 (0%)

Query: 54  SSISIK-GVGKTRATLISGEGDLLAYPNGNNLVAESTGADDQLVGIELQPDAIAFGALAA 112
           S+ SIK   GK +A +IS E DLL++ NGN  ++  +  DD+     L+ D+++ G LAA
Sbjct: 44  STFSIKTNTGKVKAAVISREDDLLSFTNGNTPLSNGSLIDDR-TEEPLEADSVSLGTLAA 102

Query: 113 DTAPT-TFGFSSDDDEFDLDSPTEGFSSIPEAIEDIRQGKFVVVVDDEDRENEGDLIMAA 171
           D+AP    GF ++DD+F+LD PT GFSSIPEAIEDIRQGK VVVVDDEDRENEGDL+MAA
Sbjct: 103 DSAPAPANGFVAEDDDFELDLPTPGFSSIPEAIEDIRQGKLVVVVDDEDRENEGDLVMAA 162

Query: 172 QLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGT 231
           QLATPEAMAFIV+HGTGIVCVSMK +DLERL LPLMV QKEN+EKL TAFTVTVDAKHGT
Sbjct: 163 QLATPEAMAFIVRHGTGIVCVSMKEDDLERLHLPLMVNQKENEEKLSTAFTVTVDAKHGT 222

Query: 232 TTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAG 291
           TTGVSARDRATT+L+LASRDSKP DFNRPGHIFPLKYREGGVLKRAGHTEASVDL VLAG
Sbjct: 223 TTGVSARDRATTILSLASRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLTVLAG 282

Query: 292 FDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIP 351
            DP  VLCE+VDDDGSMARLPKLREFA   NLK++SIADLIRYRRKRDKLV+R+SAARIP
Sbjct: 283 LDPVGVLCEIVDDDGSMARLPKLREFAAENNLKVVSIADLIRYRRKRDKLVERASAARIP 342

Query: 352 TMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLA 411
           TMWGPFTAYCYRSILDGIEHIAMVKG+IGDGQDILVRVHSECLTGDIFGSARCDCG+QLA
Sbjct: 343 TMWGPFTAYCYRSILDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLA 402

Query: 412 LAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYG 471
           L+MQQIEA GRGVLVYLRGHEGRGIGLGHKLRAYNLQD GRDTVEANEELGLPVDSREYG
Sbjct: 403 LSMQQIEATGRGVLVYLRGHEGRGIGLGHKLRAYNLQDAGRDTVEANEELGLPVDSREYG 462

Query: 472 IGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMG 531
           IGAQ++RDLGVRTMKLMTNNP+KYVGLKGYGLA+ GRVPL++ I KENKRYLETKR KMG
Sbjct: 463 IGAQIIRDLGVRTMKLMTNNPAKYVGLKGYGLAIVGRVPLLSLITKENKRYLETKRTKMG 522

Query: 532 HIYGLESNGRLTNLI 546
           H+YGL+  G +   I
Sbjct: 523 HMYGLKFKGDVVEKI 537
Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 5EC: .EC: 4EC: .EC: 2EC: 5
>sp|Q0AXM5|RIBBA_SYNWW Riboflavin biosynthesis protein RibBA OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|O66679|RIBBA_AQUAE Riboflavin biosynthesis protein RibBA OS=Aquifex aeolicus (strain VF5) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|Q5YTP3|RIBBA_NOCFA Riboflavin biosynthesis protein RibBA OS=Nocardia farcinica (strain IFM 10152) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|C0ZZE5|RIBBA_RHOE4 Riboflavin biosynthesis protein RibBA OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|A4X639|RIBBA_SALTO Riboflavin biosynthesis protein RibBA OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|A8LY38|RIBBA_SALAI Riboflavin biosynthesis protein RibBA OS=Salinispora arenicola (strain CNS-205) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|B1MCA4|RIBBA_MYCA9 Riboflavin biosynthesis protein RibBA OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|Q0S0K2|RIBBA_RHOSR Riboflavin biosynthesis protein RibBA OS=Rhodococcus sp. (strain RHA1) GN=ribBA PE=3 SV=1 Back     alignment and function description
>sp|Q9Z734|RIBBA_CHLPN Riboflavin biosynthesis protein RibBA OS=Chlamydia pneumoniae GN=ribBA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query564
225465770559 PREDICTED: riboflavin biosynthesis prote 0.989 0.998 0.827 0.0
296087438 845 unnamed protein product [Vitis vinifera] 0.989 0.660 0.827 0.0
224055964552 predicted protein [Populus trichocarpa] 0.960 0.981 0.795 0.0
356525856544 PREDICTED: riboflavin biosynthesis prote 0.959 0.994 0.762 0.0
356554732544 PREDICTED: riboflavin biosynthesis prote 0.959 0.994 0.766 0.0
298561264557 GTP cyclohydrolase II/3,4-dihydroxy-2-bu 0.982 0.994 0.734 0.0
297794019541 hypothetical protein ARALYDRAFT_496632 [ 0.861 0.898 0.821 0.0
79547445543 GTP cyclohydrolase-2 [Arabidopsis thalia 0.872 0.906 0.806 0.0
356528022546 PREDICTED: riboflavin biosynthesis prote 0.943 0.974 0.739 0.0
33308405539 GTP cyclohydrolase II/3,4-dihydroxy-2-bu 0.953 0.998 0.741 0.0
>gi|225465770|ref|XP_002267374.1| PREDICTED: riboflavin biosynthesis protein ribBA, chloroplastic-like [Vitis vinifera] Back     alignment and taxonomy information
 Score =  952 bits (2461), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/562 (82%), Positives = 504/562 (89%), Gaps = 4/562 (0%)

Query: 3   ASLNISSPSTSALSSPPACRNVKFVSGFPSTKSLLANGHSSYLAFVKLATKSSISIKGVG 62
           AS+N S P T+A+S   AC+N K  +G       L+N ++S LA ++L +KSS +IKG G
Sbjct: 2   ASINASCP-TAAISRLRACKNFKLFNGLHGVNPSLSNWYTSDLALIRLGSKSSFTIKGDG 60

Query: 63  KTRATLISGEGDLLAYPNGNNLVAESTGADDQLVGIELQPDAIAFGALAADTAPTTFGFS 122
           +TRATLISGEG LL+Y NGNN+ A +    DQ VGIE+QPDAIAFG L ADTAP T GF 
Sbjct: 61  RTRATLISGEGGLLSYSNGNNVAAITK---DQSVGIEIQPDAIAFGTLEADTAPATNGFP 117

Query: 123 SDDDEFDLDSPTEGFSSIPEAIEDIRQGKFVVVVDDEDRENEGDLIMAAQLATPEAMAFI 182
            D+DEFDLD P+EGFSSIPEAIEDIRQGK VVVVDDEDRENEGDLIMAA LATPEAMAFI
Sbjct: 118 IDNDEFDLDRPSEGFSSIPEAIEDIRQGKIVVVVDDEDRENEGDLIMAASLATPEAMAFI 177

Query: 183 VKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRAT 242
           VKHGTGIVCVSMKGEDLERL++PLMV QK+NDEKL TAFTV+VDAKHGTTTGVSARDRAT
Sbjct: 178 VKHGTGIVCVSMKGEDLERLEIPLMVTQKDNDEKLSTAFTVSVDAKHGTTTGVSARDRAT 237

Query: 243 TVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVV 302
           T+L LASRDSKP DFNRPGHIFPLKYREGGVLKRAGHTEASVDLA+LAG DP AVLCEVV
Sbjct: 238 TILALASRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAMLAGLDPVAVLCEVV 297

Query: 303 DDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIPTMWGPFTAYCY 362
           DDDGSMARLPKLR+FA+RENLKIISIADLIRYRRKRDKLVDRS+ ARIPTMWGPFTAYCY
Sbjct: 298 DDDGSMARLPKLRQFAERENLKIISIADLIRYRRKRDKLVDRSAGARIPTMWGPFTAYCY 357

Query: 363 RSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAGR 422
           RSILDGIEHIAMVKG+IGDGQDILVRVHSECLTGDIFGSARCDCG+QLALAMQQIE AG+
Sbjct: 358 RSILDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLALAMQQIEKAGK 417

Query: 423 GVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGV 482
           GVLVYLRGHEGRGIGLGHKL AYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGV
Sbjct: 418 GVLVYLRGHEGRGIGLGHKLHAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGV 477

Query: 483 RTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNGRL 542
           RTMKLMTNNP+KY+GLKGYGLAV+GRVPL+TPI KEN RYLETKR+KMGH+YGLE NG L
Sbjct: 478 RTMKLMTNNPAKYIGLKGYGLAVSGRVPLLTPITKENGRYLETKRSKMGHVYGLEFNGHL 537

Query: 543 TNLINGNGKPSIKSSSDTVSDS 564
           TNLI+GNGK SI +  D VSDS
Sbjct: 538 TNLISGNGKQSINTQPDPVSDS 559

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|296087438|emb|CBI34027.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224055964|ref|XP_002298707.1| predicted protein [Populus trichocarpa] gi|222845965|gb|EEE83512.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356525856|ref|XP_003531537.1| PREDICTED: riboflavin biosynthesis protein ribBA, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|356554732|ref|XP_003545697.1| PREDICTED: riboflavin biosynthesis protein ribBA, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|298561264|dbj|BAJ09646.1| GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase [Nicotiana benthamiana] Back     alignment and taxonomy information
>gi|297794019|ref|XP_002864894.1| hypothetical protein ARALYDRAFT_496632 [Arabidopsis lyrata subsp. lyrata] gi|297310729|gb|EFH41153.1| hypothetical protein ARALYDRAFT_496632 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|79547445|ref|NP_201235.4| GTP cyclohydrolase-2 [Arabidopsis thaliana] gi|27735197|sp|P47924.2|RIBBA_ARATH RecName: Full=Riboflavin biosynthesis protein ribBA, chloroplastic; Includes: RecName: Full=3,4-dihydroxy-2-butanone 4-phosphate synthase; Short=DHBP synthase; Includes: RecName: Full=GTP cyclohydrolase-2; AltName: Full=GTP cyclohydrolase II; Flags: Precursor gi|2462925|emb|CAA03884.1| GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone-4-phoshate synthase [Arabidopsis thaliana] gi|9759406|dbj|BAB09861.1| GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone-4-phoshate synthase [Arabidopsis thaliana] gi|332010484|gb|AED97867.1| GTP cyclohydrolase-2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356528022|ref|XP_003532604.1| PREDICTED: riboflavin biosynthesis protein ribBA, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|33308405|gb|AAQ03091.1| GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase [Malus x domestica] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query564
TAIR|locus:2173373543 GCH "GTP cyclohydrolase II" [A 0.881 0.915 0.756 4.2e-198
TAIR|locus:2041253476 RIBA2 "homolog of ribA 2" [Ara 0.746 0.884 0.669 3.8e-149
TIGR_CMR|CHY_1473401 CHY_1473 "3,4-dihydroxy-2-buta 0.709 0.997 0.564 1.1e-121
TIGR_CMR|BA_4333397 BA_4333 "3,4-dihydroxy-2-butan 0.700 0.994 0.546 1.6e-109
TIGR_CMR|GSU_1690400 GSU_1690 "3,4-dihydroxy-2-buta 0.693 0.977 0.530 2.6e-109
UNIPROTKB|P0A5V0425 ribBA "Riboflavin biosynthesis 0.703 0.934 0.541 4.3e-109
TIGR_CMR|DET_1188403 DET_1188 "3,4-dihydroxy-2-buta 0.700 0.980 0.520 6.5e-106
TIGR_CMR|CBU_0647387 CBU_0647 "riboflavin biosynthe 0.648 0.945 0.512 4.3e-93
UNIPROTKB|Q9KPU3369 VC_2269 "3,4-dihydroxy-2-butan 0.634 0.970 0.436 2.7e-68
TIGR_CMR|VC_2269369 VC_2269 "3,4-dihydroxy-2-butan 0.634 0.970 0.436 2.7e-68
TAIR|locus:2173373 GCH "GTP cyclohydrolase II" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1918 (680.2 bits), Expect = 4.2e-198, P = 4.2e-198
 Identities = 378/500 (75%), Positives = 416/500 (83%)

Query:    54 SSISIK-GVGKTRATLISGEGDLLAYPNGNNLVAESTGADDQLVGIELQPDAIAFGALAA 112
             S+ SIK   GK +A +IS E DLL++ NGN  ++  +  DD+     L+ D+++ G LAA
Sbjct:    44 STFSIKTNTGKVKAAVISREDDLLSFTNGNTPLSNGSLIDDRTEE-PLEADSVSLGTLAA 102

Query:   113 DTAPTTXXXXXXXXXXXXXX-PTEGFSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAA 171
             D+AP                 PT GFSSIPEAIEDIRQGK               L+MAA
Sbjct:   103 DSAPAPANGFVAEDDDFELDLPTPGFSSIPEAIEDIRQGKLVVVVDDEDRENEGDLVMAA 162

Query:   172 QLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGT 231
             QLATPEAMAFIV+HGTGIVCVSMK +DLERL LPLMV QKEN+EKL TAFTVTVDAKHGT
Sbjct:   163 QLATPEAMAFIVRHGTGIVCVSMKEDDLERLHLPLMVNQKENEEKLSTAFTVTVDAKHGT 222

Query:   232 TTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAG 291
             TTGVSARDRATT+L+LASRDSKP DFNRPGHIFPLKYREGGVLKRAGHTEASVDL VLAG
Sbjct:   223 TTGVSARDRATTILSLASRDSKPEDFNRPGHIFPLKYREGGVLKRAGHTEASVDLTVLAG 282

Query:   292 FDPAAVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVDRSSAARIP 351
              DP  VLCE+VDDDGSMARLPKLREFA   NLK++SIADLIRYRRKRDKLV+R+SAARIP
Sbjct:   283 LDPVGVLCEIVDDDGSMARLPKLREFAAENNLKVVSIADLIRYRRKRDKLVERASAARIP 342

Query:   352 TMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLA 411
             TMWGPFTAYCYRSILDGIEHIAMVKG+IGDGQDILVRVHSECLTGDIFGSARCDCG+QLA
Sbjct:   343 TMWGPFTAYCYRSILDGIEHIAMVKGEIGDGQDILVRVHSECLTGDIFGSARCDCGNQLA 402

Query:   412 LAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYG 471
             L+MQQIEA GRGVLVYLRGHEGRGIGLGHKLRAYNLQD GRDTVEANEELGLPVDSREYG
Sbjct:   403 LSMQQIEATGRGVLVYLRGHEGRGIGLGHKLRAYNLQDAGRDTVEANEELGLPVDSREYG 462

Query:   472 IGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKRYLETKRAKMG 531
             IGAQ++RDLGVRTMKLMTNNP+KYVGLKGYGLA+ GRVPL++ I KENKRYLETKR KMG
Sbjct:   463 IGAQIIRDLGVRTMKLMTNNPAKYVGLKGYGLAIVGRVPLLSLITKENKRYLETKRTKMG 522

Query:   532 HIYGLESNGRLTNLINGNGK 551
             H+YGL+  G +   I    +
Sbjct:   523 HMYGLKFKGDVVEKIESESE 542
GO:0003935 "GTP cyclohydrolase II activity" evidence=IEA;IGI;ISS
GO:0008686 "3,4-dihydroxy-2-butanone-4-phosphate synthase activity" evidence=IEA;IGI;ISS
GO:0009231 "riboflavin biosynthetic process" evidence=IEA;IGI;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0016020 "membrane" evidence=IDA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0048767 "root hair elongation" evidence=RCA
TAIR|locus:2041253 RIBA2 "homolog of ribA 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1473 CHY_1473 "3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4333 BA_4333 "3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1690 GSU_1690 "3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|P0A5V0 ribBA "Riboflavin biosynthesis protein RibBA" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
TIGR_CMR|DET_1188 DET_1188 "3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
TIGR_CMR|CBU_0647 CBU_0647 "riboflavin biosynthesis protein RibA" [Coxiella burnetii RSA 493 (taxid:227377)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KPU3 VC_2269 "3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_2269 VC_2269 "3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9PLJ5RIBBA_CHLMU3, ., 5, ., 4, ., 2, 50.52390.70030.9316yesno
B0KAI2RIBBA_THEP33, ., 5, ., 4, ., 2, 50.55910.69320.9873yesno
C5D3N0RIBBA_GEOSW3, ., 5, ., 4, ., 2, 50.56420.69680.9899yesno
A0QI09RIBBA_MYCA13, ., 5, ., 4, ., 2, 50.57210.69850.9270yesno
B0K0Y9RIBBA_THEPX3, ., 5, ., 4, ., 2, 50.55910.69320.9873yesno
C3LIX7RIBBA_BACAC3, ., 5, ., 4, ., 2, 50.57250.70210.9974yesno
Q5WH08RIBBA_BACSK3, ., 5, ., 4, ., 2, 50.570.70210.9974yesno
C3P7P7RIBBA_BACAA3, ., 5, ., 4, ., 2, 50.57250.70210.9974yesno
Q635H0RIBBA_BACCZ3, ., 5, ., 4, ., 2, 50.57250.70210.9974yesno
Q5YTP3RIBBA_NOCFA3, ., 5, ., 4, ., 2, 50.60050.69850.9516yesno
A0RIB3RIBBA_BACAH3, ., 5, ., 4, ., 2, 50.57250.70210.9974yesno
B7IWM5RIBBA_BACC23, ., 5, ., 4, ., 2, 50.5750.70210.9974yesno
A4QEG9RIBBA_CORGB3, ., 5, ., 4, ., 2, 50.57250.69680.9312yesno
A5U2B7RIBBA_MYCTA3, ., 5, ., 4, ., 2, 50.57210.69850.9270yesno
C0ZKW2RIBBA_BREBN3, ., 5, ., 4, ., 2, 50.58750.70210.9924yesno
P0A5V0RIBBA_MYCTU3, ., 5, ., 4, ., 2, 50.57210.69850.9270yesno
P0A5V1RIBBA_MYCBO3, ., 5, ., 4, ., 2, 50.57210.69850.9270yesno
A4SFY4RIBBA_PROVI3, ., 5, ., 4, ., 2, 50.55300.69500.9560yesno
A4X639RIBBA_SALTO3, ., 5, ., 4, ., 2, 50.57390.70390.9925yesno
Q818X6RIBBA_BACCR3, ., 5, ., 4, ., 2, 50.57250.70210.9974yesno
Q9Z734RIBBA_CHLPN3, ., 5, ., 4, ., 2, 50.56250.70560.9521yesno
B7JLW6RIBBA_BACC03, ., 5, ., 4, ., 2, 50.570.70210.9974yesno
A1KIK4RIBBA_MYCBP3, ., 5, ., 4, ., 2, 50.57210.69850.9270yesno
O66679RIBBA_AQUAE3, ., 5, ., 4, ., 2, 50.5850.70210.9753yesno
B7HAY4RIBBA_BACC43, ., 5, ., 4, ., 2, 50.57250.70210.9974yesno
P47924RIBBA_ARATH3, ., 5, ., 4, ., 2, 50.80600.87230.9060yesno
C1EQY5RIBBA_BACC33, ., 5, ., 4, ., 2, 50.57250.70210.9974yesno
B7HNM8RIBBA_BACC73, ., 5, ., 4, ., 2, 50.57250.70210.9974yesno
C1AN60RIBBA_MYCBT3, ., 5, ., 4, ., 2, 50.57210.69850.9270yesno
P17620RIBBA_BACSU3, ., 5, ., 4, ., 2, 50.55270.69680.9874yesno
Q0AXM5RIBBA_SYNWW3, ., 5, ., 4, ., 2, 50.61460.69680.9874yesno
A8LY38RIBBA_SALAI3, ., 5, ., 4, ., 2, 50.57430.70030.9404yesno
Q8NQ52RIBBA_CORGL3, ., 5, ., 4, ., 2, 50.57250.69680.9312yesno
B9IWX4RIBBA_BACCQ3, ., 5, ., 4, ., 2, 50.57250.70210.9974yesno
Q3B2I6RIBBA_PELLD3, ., 5, ., 4, ., 2, 50.55770.69850.9633yesno
A9VG50RIBBA_BACWK3, ., 5, ., 4, ., 2, 50.57750.70210.9974yesno
B1MCA4RIBBA_MYCA93, ., 5, ., 4, ., 2, 50.59450.69850.9448yesno
A1T8K1RIBBA_MYCVP3, ., 5, ., 4, ., 2, 50.57590.70740.9432yesno
Q0S0K2RIBBA_RHOSR3, ., 5, ., 4, ., 2, 50.59200.69850.9448yesno
C0ZZE5RIBBA_RHOE43, ., 5, ., 4, ., 2, 50.59450.69850.9292yesno
A0Q3H7RIBBA_CLONN3, ., 5, ., 4, ., 2, 50.55720.70560.9613yesno
B2HP67RIBBA_MYCMM3, ., 5, ., 4, ., 2, 50.57710.69850.9270yesno
Q81MB6RIBBA_BACAN3, ., 5, ., 4, ., 2, 50.57250.70210.9974yesno
Q731I5RIBBA_BACC13, ., 5, ., 4, ., 2, 50.57250.70210.9974yesno
A7GSD5RIBBA_BACCN3, ., 5, ., 4, ., 2, 50.550.70210.9974yesno
A4TC13RIBBA_MYCGI3, ., 5, ., 4, ., 2, 50.58200.69850.9314yesno
A0PPL6RIBBA_MYCUA3, ., 5, ., 4, ., 2, 50.57460.69850.9270yesno
Q6HE54RIBBA_BACHK3, ., 5, ., 4, ., 2, 50.57250.70210.9974yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer4.1.99.120.979
3rd Layer3.5.40.983
3rd Layer4.1.990.983
3rd Layer3.5.4.250.979

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00031262001
SubName- Full=Chromosome undetermined scaffold_55, whole genome shotgun sequence; (648 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00034771001
RecName- Full=6,7-dimethyl-8-ribityllumazine synthase; EC=2.5.1.9; (185 aa)
• •  •• 0.995
GSVIVG00026840001
SubName- Full=Chromosome chr15 scaffold_40, whole genome shotgun sequence; (230 aa)
• •  •• 0.991
GSVIVG00018574001
SubName- Full=Chromosome chr12 scaffold_18, whole genome shotgun sequence; (280 aa)
•••  •• 0.896
GSVIVG00020457001
SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (208 aa)
     •• 0.824
GSVIVG00038611001
RecName- Full=Pyruvate kinase; EC=2.7.1.40; (573 aa)
     •  0.800
GSVIVG00036953001
SubName- Full=Chromosome chr1 scaffold_84, whole genome shotgun sequence; (417 aa)
     •  0.800
GSVIVG00036639001
SubName- Full=Chromosome chr3 scaffold_8, whole genome shotgun sequence; (318 aa)
     •  0.800
GSVIVG00035276001
SubName- Full=Chromosome chr10 scaffold_76, whole genome shotgun sequence;; DNA-dependent RNA p [...] (310 aa)
     •  0.800
GSVIVG00034786001
SubName- Full=Chromosome chr5 scaffold_72, whole genome shotgun sequence; (471 aa)
     •  0.800
GSVIVG00034619001
SubName- Full=Chromosome chr5 scaffold_72, whole genome shotgun sequence; (145 aa)
     •  0.800

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query564
PLN02831450 PLN02831, PLN02831, Bifunctional GTP cyclohydrolas 0.0
PRK09311402 PRK09311, PRK09311, bifunctional 3,4-dihydroxy-2-b 0.0
PRK09319 555 PRK09319, PRK09319, bifunctional 3,4-dihydroxy-2-b 0.0
PRK14019367 PRK14019, PRK14019, bifunctional 3,4-dihydroxy-2-b 1e-134
cd00641193 cd00641, GTP_cyclohydro2, GTP cyclohydrolase II (R 1e-112
PRK09318387 PRK09318, PRK09318, bifunctional 3,4-dihydroxy-2-b 1e-110
pfam00926193 pfam00926, DHBP_synthase, 3,4-dihydroxy-2-butanone 1e-107
COG0108203 COG0108, RibB, 3,4-dihydroxy-2-butanone 4-phosphat 1e-105
PRK09314339 PRK09314, PRK09314, bifunctional 3,4-dihydroxy-2-b 1e-103
COG0807193 COG0807, RibA, GTP cyclohydrolase II [Coenzyme met 2e-95
PRK00393197 PRK00393, ribA, GTP cyclohydrolase II; Reviewed 1e-94
pfam00925169 pfam00925, GTP_cyclohydro2, GTP cyclohydrolase II 1e-94
PRK12485369 PRK12485, PRK12485, bifunctional 3,4-dihydroxy-2-b 1e-93
TIGR00506199 TIGR00506, ribB, 3,4-dihydroxy-2-butanone 4-phosph 4e-84
PRK03353217 PRK03353, ribB, 3,4-dihydroxy-2-butanone 4-phospha 1e-82
TIGR00505191 TIGR00505, ribA, GTP cyclohydrolase II 8e-82
PRK01792214 PRK01792, ribB, 3,4-dihydroxy-2-butanone 4-phospha 2e-75
PRK00910218 PRK00910, ribB, 3,4-dihydroxy-2-butanone 4-phospha 2e-64
PRK00014230 PRK00014, ribB, 3,4-dihydroxy-2-butanone 4-phospha 9e-59
PRK08815375 PRK08815, PRK08815, GTP cyclohydrolase; Provisiona 4e-48
PRK05773219 PRK05773, PRK05773, 3,4-dihydroxy-2-butanone 4-pho 2e-20
PRK07198418 PRK07198, PRK07198, hypothetical protein; Validate 1e-05
>gnl|CDD|215445 PLN02831, PLN02831, Bifunctional GTP cyclohydrolase II/ 3,4-dihydroxy-2-butanone-4-phosphate synthase Back     alignment and domain information 
 Score =  892 bits (2306), Expect = 0.0
 Identities = 361/450 (80%), Positives = 395/450 (87%), Gaps = 1/450 (0%)

Query: 103 DAIAFGALAADTAPTTFGFSSDDDEFDLDSPTEGFSSIPEAIEDIRQGKFVVVVDDEDRE 162
           D+ +FG LAA+  PTT  F   D E D D PTEGFSSI EA+EDIRQGKFVVVVDDEDRE
Sbjct: 1   DSASFGTLAAEITPTTDDFFVSDAEGDPDRPTEGFSSIAEALEDIRQGKFVVVVDDEDRE 60

Query: 163 NEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFT 222
           NEGDLIMAA L TPEAMAF+VKHG+GIVCVSMKGEDL+RL LPLMV  KEN+EK+ TAFT
Sbjct: 61  NEGDLIMAASLVTPEAMAFLVKHGSGIVCVSMKGEDLDRLRLPLMVPSKENEEKMATAFT 120

Query: 223 VTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEA 282
           VTVDAKHGTTTGVSA DRA T+L LAS DSKP DF RPGHIFPL+YREGGVLKRAGHTEA
Sbjct: 121 VTVDAKHGTTTGVSASDRAKTILALASPDSKPEDFRRPGHIFPLRYREGGVLKRAGHTEA 180

Query: 283 SVDLAVLAGFDPAAVLCEVVDD-DGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKL 341
           +VDLAVLAG  P  VLCE+V+D DGSMARLP+LR+FA+   LKIISIADLIRYRRKR+KL
Sbjct: 181 AVDLAVLAGLPPVGVLCEIVNDEDGSMARLPQLRKFAEEHGLKIISIADLIRYRRKREKL 240

Query: 342 VDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGS 401
           V+R++ AR+PT WG FTAYCYRS LDGIEHIA VKGDIGDGQD+LVRVHSECLTGDIFGS
Sbjct: 241 VERTAVARLPTKWGLFTAYCYRSKLDGIEHIAFVKGDIGDGQDVLVRVHSECLTGDIFGS 300

Query: 402 ARCDCGDQLALAMQQIEAAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEEL 461
           ARCDCG+QLALAMQ IE AGRGVLVYLRGHEGRGIGLGHKLRAYNLQD+GRDTVEANEEL
Sbjct: 301 ARCDCGNQLALAMQLIEKAGRGVLVYLRGHEGRGIGLGHKLRAYNLQDEGRDTVEANEEL 360

Query: 462 GLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGYGLAVAGRVPLITPIKKENKR 521
           GLPVDSREYGIGAQ+LRDLGVRTM+LMTNNP+KY GLKGYGLAV GRVPL+TPI KENKR
Sbjct: 361 GLPVDSREYGIGAQILRDLGVRTMRLMTNNPAKYTGLKGYGLAVVGRVPLLTPITKENKR 420

Query: 522 YLETKRAKMGHIYGLESNGRLTNLINGNGK 551
           YLETKR KMGH+YG +  G ++ L +    
Sbjct: 421 YLETKRTKMGHVYGSDLGGHVSGLESAETN 450

Length = 450
>gnl|CDD|181774 PRK09311, PRK09311, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional Back     alignment and domain information
>gnl|CDD|236465 PRK09319, PRK09319, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein; Provisional Back     alignment and domain information
>gnl|CDD|237587 PRK14019, PRK14019, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional Back     alignment and domain information
>gnl|CDD|238348 cd00641, GTP_cyclohydro2, GTP cyclohydrolase II (RibA) Back     alignment and domain information
>gnl|CDD|236464 PRK09318, PRK09318, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional Back     alignment and domain information
>gnl|CDD|216197 pfam00926, DHBP_synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase Back     alignment and domain information
>gnl|CDD|223186 COG0108, RibB, 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|181775 PRK09314, PRK09314, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional Back     alignment and domain information
>gnl|CDD|223878 COG0807, RibA, GTP cyclohydrolase II [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|234745 PRK00393, ribA, GTP cyclohydrolase II; Reviewed Back     alignment and domain information
>gnl|CDD|216196 pfam00925, GTP_cyclohydro2, GTP cyclohydrolase II Back     alignment and domain information
>gnl|CDD|171535 PRK12485, PRK12485, bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional Back     alignment and domain information
>gnl|CDD|232999 TIGR00506, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase Back     alignment and domain information
>gnl|CDD|235119 PRK03353, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|129596 TIGR00505, ribA, GTP cyclohydrolase II Back     alignment and domain information
>gnl|CDD|167278 PRK01792, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|179162 PRK00910, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|134031 PRK00014, ribB, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>gnl|CDD|236340 PRK08815, PRK08815, GTP cyclohydrolase; Provisional Back     alignment and domain information
>gnl|CDD|235601 PRK05773, PRK05773, 3,4-dihydroxy-2-butanone 4-phosphate synthase; Validated Back     alignment and domain information
>gnl|CDD|235959 PRK07198, PRK07198, hypothetical protein; Validated Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 564
PLN02831450 Bifunctional GTP cyclohydrolase II/ 3,4-dihydroxy- 100.0
PRK09319 555 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate 100.0
PRK09311402 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate 100.0
PRK09318387 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate 100.0
PRK12485369 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate 100.0
PRK14019367 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate 100.0
PRK09314339 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate 100.0
PRK08815375 GTP cyclohydrolase; Provisional 100.0
COG0108203 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase 100.0
PRK00910218 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 100.0
PRK01792214 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 100.0
PRK00014230 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 100.0
TIGR00506199 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 100.0
PF00926194 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphat 100.0
KOG1284357 consensus Bifunctional GTP cyclohydrolase II/3,4-d 100.0
COG0807193 RibA GTP cyclohydrolase II [Coenzyme metabolism] 100.0
PRK03353217 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase 100.0
PRK05773219 3,4-dihydroxy-2-butanone 4-phosphate synthase; Val 100.0
PRK00393197 ribA GTP cyclohydrolase II; Reviewed 100.0
TIGR00505191 ribA GTP cyclohydrolase II. Several members of the 100.0
PF00925169 GTP_cyclohydro2: GTP cyclohydrolase II; InterPro: 100.0
cd00641193 GTP_cyclohydro2 GTP cyclohydrolase II (RibA). GTP 100.0
PRK07198418 hypothetical protein; Validated 100.0
KOG1284357 consensus Bifunctional GTP cyclohydrolase II/3,4-d 99.7
>PLN02831 Bifunctional GTP cyclohydrolase II/ 3,4-dihydroxy-2-butanone-4-phosphate synthase Back     alignment and domain information 
Probab=100.00  E-value=1.8e-139  Score=1116.59  Aligned_cols=442  Identities=81%  Similarity=1.275  Sum_probs=431.5

Q ss_pred             ccccccccccCCCcccCCccCCCCCCCCCCCCCCCCCHHHHHHHHHcCCEEEEEeCCCCCCcccEEEEcCCCCHHHHHHH
Q 008469          103 DAIAFGALAADTAPTTFGFSSDDDEFDLDSPTEGFSSIPEAIEDIRQGKFVVVVDDEDRENEGDLIMAAQLATPEAMAFI  182 (564)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~p~~~~~~Ve~AI~aLr~G~~VvV~DdedREnEgdLV~AAe~~T~e~iaFm  182 (564)
                      ++.+|||++++++|++++|+.+..+.+++.+++.|++|++||++||+|+||||+||+|||||||||+|||.+||+.||||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~ai~~lr~G~~Viv~Dd~~rEnegdLv~aAe~~t~e~v~fm   80 (450)
T PLN02831          1 DSASFGTLAAEITPTTDDFFVSDAEGDPDRPTEGFSSIAEALEDIRQGKFVVVVDDEDRENEGDLIMAASLVTPEAMAFL   80 (450)
T ss_pred             CCccccccccCCcccccccccccccccccCcccccCcHHHHHHHHHCCCeEEEEeCCCCCCceeEEEEchhCCHHHHHHH
Confidence            57899999999999999999999999999997789999999999999999999999999999999999999999999999


Q ss_pred             HHhCCceEEEecChhhhhhcCCccccccccCcccCCCceeEeeecCCCCCcCCChhhHHHHHHHHHcCCCCCCCCCCCCc
Q 008469          183 VKHGTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGH  262 (564)
Q Consensus       183 ~r~~~Glicvam~~e~~~rL~Lp~M~~~~~n~~~~~taFtVsVDa~~g~tTGISA~DRA~TIraLAd~~s~p~Df~rPGH  262 (564)
                      ++|++|+||+||++++|++|+||+|+....|.+..+++||||||+++|++|||||.|||+|||+||+|.++|+||++|||
T Consensus        81 ~~~~~GliC~~lt~~ra~~L~Lp~m~~~~~n~~~~~t~ftvsVd~~~g~~TGISa~dRa~Tir~lad~~~~~~df~~PGH  160 (450)
T PLN02831         81 VKHGSGIVCVSMKGEDLDRLRLPLMVPSKENEEKMATAFTVTVDAKHGTTTGVSASDRAKTILALASPDSKPEDFRRPGH  160 (450)
T ss_pred             HHhCCCceEEecCHHHHhhcCCCcccccccCCcccCCCceEEEecCCCcccccchHHHHHHHHHHhCcCCChhhcCCCCc
Confidence            99999999999999999999999999854577778899999999999999999999999999999999999999999999


Q ss_pred             cceeeeccCCcccccchhHHHHHHHHHcCCCceEEEEEEeCC-CCCcCChhHHHHHHHhcCCceEeehhHHHHHhhcccc
Q 008469          263 IFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDD-DGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKL  341 (564)
Q Consensus       263 VfPL~a~~gGvl~R~GhTEAAVdLarlAGl~PaaVicEiv~~-dG~mar~~~l~~fA~~h~L~ivsi~DLi~yr~~~e~l  341 (564)
                      ||||++++|||++|+|||||||||||||||.||+|||||+++ ||+|||.+++++||++|+||+++|+|||+||+++|++
T Consensus       161 vfPL~a~~ggvl~R~GhtEaavdLarlAgl~Paavi~Ei~~~~dG~m~~~~~~~~fA~~h~L~~v~i~dli~yr~~~e~l  240 (450)
T PLN02831        161 IFPLRYREGGVLKRAGHTEAAVDLAVLAGLPPVGVLCEIVNDEDGSMARLPQLRKFAEEHGLKIISIADLIRYRRKREKL  240 (450)
T ss_pred             ccceeecccCccCCCChHHHHHHHHHHcCCCceEEEEEeccCCCCCccChHHHHHHHHHcCCcEEEHHHHHHHHhhcccc
Confidence            999999999999999999999999999999999999999995 8999999999999999999999999999999999999


Q ss_pred             ccccccccccCCCCcEEEEEEEecCCCceEEEEEeccCCCCCceeEEeccCCcccccccCCCCCChHHHHHHHHHHHHhC
Q 008469          342 VDRSSAARIPTMWGPFTAYCYRSILDGIEHIAMVKGDIGDGQDILVRVHSECLTGDIFGSARCDCGDQLALAMQQIEAAG  421 (564)
Q Consensus       342 Ver~~~~~lpT~~G~F~~~~Yr~~~dg~EHlALV~Gdi~~~~~vLVRVHSeCltgDvfgS~rCDCg~QL~~AL~~Ia~~G  421 (564)
                      |+++++.+|||.||.|++++|++..++.||+|||+|++.+++||||||||+|+|||+|||.+|||+|||+.||++|+++|
T Consensus       241 V~rv~~~~lpT~~G~F~~~~yr~~~~g~eHlALv~Gd~~~~~~vLVRVHSec~tgDvfgs~rCdCg~qL~~Al~~I~~~G  320 (450)
T PLN02831        241 VERTAVARLPTKWGLFTAYCYRSKLDGIEHIAFVKGDIGDGQDVLVRVHSECLTGDIFGSARCDCGNQLALAMQLIEKAG  320 (450)
T ss_pred             ccccceeeeecCCCCEEEEEEEeCCCCeEEEEEEeCCcCCCCCceEEEeccCCHHHHhcCCCCCCcchHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999888899999999999999999999999999999999999999


Q ss_pred             CEEEEEEeCCCCCCcchhhhhhhhccccCCCCchHhhhhcCCCCCCcChhHHHHHHHHcCCCceecccCCCCcccccccC
Q 008469          422 RGVLVYLRGHEGRGIGLGHKLRAYNLQDDGRDTVEANEELGLPVDSREYGIGAQMLRDLGVRTMKLMTNNPSKYVGLKGY  501 (564)
Q Consensus       422 ~GVlVYLr~qEGRGiGL~~Kl~AY~Lqd~g~DTveAn~~LG~~~D~RdYgigAQILrdLGV~~IrLLTNNP~K~~aL~g~  501 (564)
                      +|||||||+||||||||.+|+++|.||++|+||++||.+||++.|+|+||+|||||++|||++||||||||+|+++|++|
T Consensus       321 ~GVlvYLr~qegrgigl~~Kl~ay~lq~~g~dt~eAn~~lg~~~D~RdygigAqIL~dLGI~~irLLTNNp~K~~~L~~~  400 (450)
T PLN02831        321 RGVLVYLRGHEGRGIGLGHKLRAYNLQDEGRDTVEANEELGLPVDSREYGIGAQILRDLGVRTMRLMTNNPAKYTGLKGY  400 (450)
T ss_pred             CEEEEEEcCCCcccchHHHHHHHHhcccccCcchhhhhhccCcccceehHHHHHHHHHcCCCEEEECCCCHHHHHHHhhC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcEEEEEeeccCCCChhhHHHHHHHHHhcCCCCCCCCCcccce
Q 008469          502 GLAVAGRVPLITPIKKENKRYLETKRAKMGHIYGLESNGRLTN  544 (564)
Q Consensus       502 GIeV~ervpl~~~~~~~n~~YL~tK~~k~gH~l~~~~~~~~~~  544 (564)
                      ||+|++++|+.++++++|++||+||++||||++..++.+++..
T Consensus       401 GieVve~vp~~~~~~~~n~~Yl~tK~~k~gH~l~~~~~~~~~~  443 (450)
T PLN02831        401 GLAVVGRVPLLTPITKENKRYLETKRTKMGHVYGSDLGGHVSG  443 (450)
T ss_pred             CCEEEEEecccCCCChhhHHHHHHHHHHhCCcCCCCCCCcccc
Confidence            9999999999999999999999999999999999999887764

>PRK09319 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II/unknown domain fusion protein; Provisional Back     alignment and domain information
>PRK09311 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional Back     alignment and domain information
>PRK09318 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional Back     alignment and domain information
>PRK12485 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional Back     alignment and domain information
>PRK14019 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II-like protein; Provisional Back     alignment and domain information
>PRK09314 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional Back     alignment and domain information
>PRK08815 GTP cyclohydrolase; Provisional Back     alignment and domain information
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism] Back     alignment and domain information
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase Back     alignment and domain information
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4 Back     alignment and domain information
>KOG1284 consensus Bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2butanone-4-phosphate synthase [Coenzyme transport and metabolism] Back     alignment and domain information
>COG0807 RibA GTP cyclohydrolase II [Coenzyme metabolism] Back     alignment and domain information
>PRK03353 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional Back     alignment and domain information
>PRK05773 3,4-dihydroxy-2-butanone 4-phosphate synthase; Validated Back     alignment and domain information
>PRK00393 ribA GTP cyclohydrolase II; Reviewed Back     alignment and domain information
>TIGR00505 ribA GTP cyclohydrolase II Back     alignment and domain information
>PF00925 GTP_cyclohydro2: GTP cyclohydrolase II; InterPro: IPR000926 GTP cyclohydrolase II catalyses the first committed step in the biosynthesis of riboflavin Back     alignment and domain information
>cd00641 GTP_cyclohydro2 GTP cyclohydrolase II (RibA) Back     alignment and domain information
>PRK07198 hypothetical protein; Validated Back     alignment and domain information
>KOG1284 consensus Bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2butanone-4-phosphate synthase [Coenzyme transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query564
1iez_A217 Solution Structure Of 3,4-Dihydroxy-2-Butanone 4-Ph 1e-47
1g57_A217 Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Pho 1e-47
3h07_A220 Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Pho 1e-47
2bz0_A196 Crystal Structure Of E. Coli Gtp Cyclohydrolase Ii 6e-47
3lqu_A217 Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Pho 1e-46
2bz1_A196 Crystal Structure Of Apo E. Coli Gtp Cyclohydrolase 2e-45
3mgz_A206 Crystal Structure Of Dhbps Domain Of Bi-Functional 5e-44
3mk5_A212 Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Pho 6e-44
1tks_A204 Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Pho 8e-43
1k49_A233 Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Pho 4e-38
1pvw_A227 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase From 1e-19
1pvy_A227 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase From 1e-18
>pdb|1IEZ|A Chain A, Solution Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase Of Riboflavin Biosynthesis Length = 217 Back     alignment and structure 
Iteration: 1

 Score =  187 bits (476), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 90/204 (44%), Positives = 129/204 (63%), Gaps = 2/204 (0%)
Query: 137 FSSIPEAIEDIRQGKFXXXXXXXXXXXXXXLIMAAQLATPEAMAFIVKHGTGIVCVSMKG 196
           F  +  A+  +R+G+               +I  A+  T E MA  ++HG+GIVC+ +  
Sbjct: 13  FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITE 72
Query: 197 EDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGD 256
           +  ++LDLP+MV  + N     T FTVT++A  G TTGVSA DR TTV    +  +KP D
Sbjct: 73  DRRKQLDLPMMV--ENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSD 130
Query: 257 FNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLRE 316
            NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+  E
Sbjct: 131 LNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIE 190
Query: 317 FAKRENLKIISIADLIRYRRKRDK 340
           FA + N+ +++I DL+ YR+  ++
Sbjct: 191 FANKHNMALVTIEDLVAYRQAHER 214
>pdb|1G57|A Chain A, Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase Length = 217 Back     alignment and structure
>pdb|3H07|A Chain A, Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase From Yersinia Pestis Co92 Length = 220 Back     alignment and structure
>pdb|2BZ0|A Chain A, Crystal Structure Of E. Coli Gtp Cyclohydrolase Ii In Complex With Gtp Analogue, Gmpcpp, And Zinc Length = 196 Back     alignment and structure
>pdb|3LQU|A Chain A, Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase Complexed With Ribulose-5 Phosphate Length = 217 Back     alignment and structure
>pdb|2BZ1|A Chain A, Crystal Structure Of Apo E. Coli Gtp Cyclohydrolase Ii Length = 196 Back     alignment and structure
>pdb|3MGZ|A Chain A, Crystal Structure Of Dhbps Domain Of Bi-Functional DhbpsGTP Cyclohydrolase Ii From Mycobacterium Tuberculosis At Ph 4.0 Length = 206 Back     alignment and structure
>pdb|3MK5|A Chain A, Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase Domain From Mycobacterium Tuberculosis With Sulfate And Zinc At Ph 4.00 Length = 212 Back     alignment and structure
>pdb|1TKS|A Chain A, Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase Of Candida Albicans Length = 204 Back     alignment and structure
>pdb|1K49|A Chain A, Crystal Structure Of 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase (Cation Free Form) Length = 233 Back     alignment and structure
>pdb|1PVW|A Chain A, 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase From M. Jannaschii Length = 227 Back     alignment and structure
>pdb|1PVY|A Chain A, 3,4-Dihydroxy-2-Butanone 4-Phosphate Synthase From M. Jannaschii In Complex With Ribulose 5-Phosphate Length = 227 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query564
1g57_A217 DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphat 1e-132
1tks_A204 3,4-dihydroxy-2-butanone 4-phosphate synthase; rib 1e-131
1k4i_A233 3,4-dihydroxy-2-butanone 4-phosphate synthase; rib 1e-130
3mio_A206 DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphat 1e-130
2bz1_A196 GTP cyclohydrolase II; riboflavin biosynthesis, ca 1e-129
1snn_A227 DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphat 1e-116
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A Length = 217 Back     alignment and structure
 Score =  383 bits (985), Expect = e-132
 Identities = 104/217 (47%), Positives = 145/217 (66%), Gaps = 2/217 (0%)

Query: 126 DEFDLDSPTEGFSSIPEAIEDIRQGKFVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKH 185
            +  L S    F  +  A+  +R+G+ V+V+DDEDRENEGD+I  A+  T E MA  ++H
Sbjct: 2   AQTLLSSFGTPFERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRH 61

Query: 186 GTGIVCVSMKGEDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVL 245
           G+GIVC+ +  +  ++LDLP+MV    N     T FTVT++A  G TTGVSA DR TTV 
Sbjct: 62  GSGIVCLCITEDRRKQLDLPMMVEN--NTSAYGTGFTVTIEAAEGVTTGVSAADRITTVR 119

Query: 246 TLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDD 305
              +  +KP D NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DD
Sbjct: 120 AAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDD 179

Query: 306 GSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLV 342
           G+MAR P+  EFA + N+ +++I DL+ YR+  ++  
Sbjct: 180 GTMARAPECIEFANKHNMALVTIEDLVAYRQAHERKA 216
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A* Length = 204 Back     alignment and structure
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A Length = 233 Back     alignment and structure
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} PDB: 3mgz_A 3mk5_A Length = 206 Back     alignment and structure
>2bz1_A GTP cyclohydrolase II; riboflavin biosynthesis, catalytic zinc, magnesium; 1.54A {Escherichia coli} SCOP: c.144.1.1 PDB: 2bz0_A Length = 196 Back     alignment and structure
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A Length = 227 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query564
1k4i_A233 3,4-dihydroxy-2-butanone 4-phosphate synthase; rib 100.0
3mio_A206 DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphat 100.0
1tks_A204 3,4-dihydroxy-2-butanone 4-phosphate synthase; rib 100.0
1snn_A227 DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphat 100.0
1g57_A217 DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphat 100.0
2bz1_A196 GTP cyclohydrolase II; riboflavin biosynthesis, ca 100.0
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A Back     alignment and structure
Probab=100.00  E-value=5.3e-77  Score=585.66  Aligned_cols=208  Identities=47%  Similarity=0.759  Sum_probs=201.4

Q ss_pred             CCCCCCHHHHHHHHHcCCEEEEEeCCCCCCcccEEEEcCCCCHHHHHHHHHhCCceEEEecChhhhhhcCCccccccccC
Q 008469          134 TEGFSSIPEAIEDIRQGKFVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKEN  213 (564)
Q Consensus       134 ~~~~~~Ve~AI~aLr~G~~VvV~DdedREnEgdLV~AAe~~T~e~iaFm~r~~~Glicvam~~e~~~rL~Lp~M~~~~~n  213 (564)
                      .+.|++||+||++||+|+||||+||+|||||||||+|||++||+.||||+||++|+||+||++++|++|+||+|+..  |
T Consensus         9 ~~~~~~ie~Ai~alr~G~~Viv~DdedREnEgDLi~aAe~~T~e~i~fm~r~~~GliC~~lt~e~~~~L~Lp~Mv~~--n   86 (233)
T 1k4i_A            9 KSNFDAIPDVIQAFKNGEFVVVLDDPSRENEADLIIAAESVTTEQMAFMVRHSSGLICAPLTPERTTALDLPQMVTH--N   86 (233)
T ss_dssp             ---CCCHHHHHHHHHTTCCEEEECCTTTTCCEEEEEEGGGCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCCBSCSS--C
T ss_pred             CCchhHHHHHHHHHHCCCeEEEEeCCCCCcceeEEEEhhhCCHHHHHHHHHcCCCCEEEEcCHHHHhhCCCcccccc--c
Confidence            45699999999999999999999999999999999999999999999999999999999999999999999999987  8


Q ss_pred             cccCCCceeEeeecCC-CCCcCCChhhHHHHHHHHHcCCCCCCCCCCCCccceeeeccCCcccccchhHHHHHHHHHcCC
Q 008469          214 DEKLCTAFTVTVDAKH-GTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGF  292 (564)
Q Consensus       214 ~~~~~taFtVsVDa~~-g~tTGISA~DRA~TIraLAd~~s~p~Df~rPGHVfPL~a~~gGvl~R~GhTEAAVdLarlAGl  292 (564)
                      ++.++|+|||||||++ |++|||||.|||+||++|+++.++|+||+||||||||++++||||+|+|||||||||||||||
T Consensus        87 ~~~~~TaFTVsVda~~~g~tTGISA~DRa~Tir~la~~~~~p~df~rPGHvfPL~A~~GGVl~R~GHTEAaVDLarLAGl  166 (233)
T 1k4i_A           87 ADPRGTAYTVSVDAEHPSTTTGISAHDRALACRMLAAPDAQPSHFRRPGHVFPLRAVAGGVRARRGHTEAGVELCRLAGK  166 (233)
T ss_dssp             CCSSCCCBBCCEEECSTTCSSSCSHHHHHHHHHHHHCTTCCGGGEEEEEEEEEEECCTTHHHHCCSHHHHHHHHHHHTTC
T ss_pred             CCCCCCCeEEEEEcccCCCCCCcCHHHHHHHHHHHhCCCCCHHHcCCCCccceeeecCCCeeccCChHHHHHHHHHHcCC
Confidence            8889999999999998 999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CceEEEEEEeCC-----------CCCcCChhHHHHHHHhcCCceEeehhHHHHHhhcccccc
Q 008469          293 DPAAVLCEVVDD-----------DGSMARLPKLREFAKRENLKIISIADLIRYRRKRDKLVD  343 (564)
Q Consensus       293 ~PaaVicEiv~~-----------dG~mar~~~l~~fA~~h~L~ivsi~DLi~yr~~~e~lVe  343 (564)
                      .|++|||||+++           ||+|||++++++||++||||+++|+|||+||+++|++|+
T Consensus       167 ~PagVicEi~~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~iitI~dLi~yr~~~e~~v~  228 (233)
T 1k4i_A          167 RPVAVISEIVDDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCTIEDMIAHVEKTEGKLE  228 (233)
T ss_dssp             CSBEEEEEBEECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEEEHHHHHHHHHHHHCCC-
T ss_pred             CceEEEEEeCCCcccccccccCCCCCcCCHHHHHHHHHHcCCcEEEHHHHHHHHHhcCCeec
Confidence            999999999999           999999999999999999999999999999999999875
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A Back     alignment and structure
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A* Back     alignment and structure
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A Back     alignment and structure
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A Back     alignment and structure
>2bz1_A GTP cyclohydrolase II; riboflavin biosynthesis, catalytic zinc, magnesium; 1.54A {Escherichia coli} SCOP: c.144.1.1 PDB: 2bz0_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 564
d1g57a_209 d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphat 1e-79
d1k4ia_216 d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphat 4e-77
d1snna_219 d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphat 1e-76
d1tksa_202 d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphat 2e-75
d2bz1a1174 c.144.1.1 (A:1-174) GTP cyclohydrolase II, RibA {E 9e-60
>d1g57a_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Escherichia coli [TaxId: 562]} Length = 209 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: YrdC/RibB
superfamily: YrdC/RibB
family: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
domain: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
species: Escherichia coli [TaxId: 562]

 Score =  246 bits (630), Expect = 1e-79
 Identities = 101/203 (49%), Positives = 141/203 (69%), Gaps = 2/203 (0%)

Query: 137 FSSIPEAIEDIRQGKFVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKG 196
           F  +  A+  +R+G+ V+V+DDEDRENEGD+I  A+  T E MA  ++HG+GIVC+ +  
Sbjct: 9   FERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITE 68

Query: 197 EDLERLDLPLMVAQKENDEKLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGD 256
           +  ++LDLP+M   + N     T FTVT++A  G TTGVSA DR TTV    +  +KP D
Sbjct: 69  DRRKQLDLPMM--VENNTSAYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSD 126

Query: 257 FNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPAAVLCEVVDDDGSMARLPKLRE 316
            NRPGH+FPL+ + GGVL R GHTEA++DL  LAGF PA VLCE+ +DDG+MAR P+  E
Sbjct: 127 LNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPAGVLCELTNDDGTMARAPECIE 186

Query: 317 FAKRENLKIISIADLIRYRRKRD 339
           FA + N+ +++I DL+ YR+  +
Sbjct: 187 FANKHNMALVTIEDLVAYRQAHE 209
>d1k4ia_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Magnaporthe grisea [TaxId: 148305]} Length = 216 Back     information, alignment and structure
>d1snna_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]} Length = 219 Back     information, alignment and structure
>d1tksa_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Candida albicans [TaxId: 5476]} Length = 202 Back     information, alignment and structure
>d2bz1a1 c.144.1.1 (A:1-174) GTP cyclohydrolase II, RibA {Escherichia coli [TaxId: 562]} Length = 174 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query564
d1g57a_209 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHB 100.0
d1tksa_202 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHB 100.0
d1k4ia_216 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHB 100.0
d1snna_219 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHB 100.0
d2bz1a1174 GTP cyclohydrolase II, RibA {Escherichia coli [Tax 100.0
>d1g57a_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: YrdC/RibB
superfamily: YrdC/RibB
family: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
domain: 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5e-72  Score=543.98  Aligned_cols=202  Identities=50%  Similarity=0.891  Sum_probs=193.7

Q ss_pred             CCCCHHHHHHHHHcCCEEEEEeCCCCCCcccEEEEcCCCCHHHHHHHHHhCCceEEEecChhhhhhcCCccccccccCcc
Q 008469          136 GFSSIPEAIEDIRQGKFVVVVDDEDRENEGDLIMAAQLATPEAMAFIVKHGTGIVCVSMKGEDLERLDLPLMVAQKENDE  215 (564)
Q Consensus       136 ~~~~Ve~AI~aLr~G~~VvV~DdedREnEgdLV~AAe~~T~e~iaFm~r~~~Glicvam~~e~~~rL~Lp~M~~~~~n~~  215 (564)
                      .|++|++||++||+|+||||+||++||||||||++||.+||+.||||+||++|+||+||++++|++|+||+|+..  |.+
T Consensus         8 ~~~~ie~ai~alk~G~~Viv~Dd~~RE~EgDlv~~Ae~~t~e~i~fm~~~~~GliC~a~~~~~~~~L~Lp~m~~~--~~~   85 (209)
T d1g57a_           8 PFERVENALAALREGRGVMVLDDEDRENEGDMIFPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVEN--NTS   85 (209)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEC----CCCEEEEEETTTCCHHHHHHHHHHBCSCCEEEECHHHHHHTTCCBSCSS--CCC
T ss_pred             chhhHHHHHHHHHCCCEEEEEECCCCCCcccEEEEHHHCCHHHHHHHHHhCCCCEEEcccHHHHhcCCCCCcccc--ccc
Confidence            467899999999999999999999999999999999999999999999999999999999999999999999986  778


Q ss_pred             cCCCceeEeeecCCCCCcCCChhhHHHHHHHHHcCCCCCCCCCCCCccceeeeccCCcccccchhHHHHHHHHHcCCCce
Q 008469          216 KLCTAFTVTVDAKHGTTTGVSARDRATTVLTLASRDSKPGDFNRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGFDPA  295 (564)
Q Consensus       216 ~~~taFtVsVDa~~g~tTGISA~DRA~TIraLAd~~s~p~Df~rPGHVfPL~a~~gGvl~R~GhTEAAVdLarlAGl~Pa  295 (564)
                      .++++|+||||+++|++|||||.|||+||+.|++++++|+||++|||||||++++|||++|+||||||||||+|||+.|+
T Consensus        86 ~~~~~ftvsvd~~~g~tTGISa~dRa~Tir~l~~~~~~~~df~~PGHv~pL~a~~gGv~~R~GHTEaavdL~~lAGl~P~  165 (209)
T d1g57a_          86 AYGTGFTVTIEAAEGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDLMTLAGFKPA  165 (209)
T ss_dssp             TTCCCBBSCEEESSSCSSSCSHHHHHHHHHHHHSTTCCGGGEEEEEEEEEEECCTTGGGTCCSHHHHHHHHHHHTTSCSC
T ss_pred             ccCCcceEEEEecCCccccccHHHHHHHHHHhhccCCCHHHhcCCceeceeeeccCCccccchHHHHHHHHHHhcCCCCe
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEEEeCCCCCcCChhHHHHHHHhcCCceEeehhHHHHHhhcc
Q 008469          296 AVLCEVVDDDGSMARLPKLREFAKRENLKIISIADLIRYRRKRD  339 (564)
Q Consensus       296 aVicEiv~~dG~mar~~~l~~fA~~h~L~ivsi~DLi~yr~~~e  339 (564)
                      +||||||++||+|++.+++++||++|+||+|+|+|||+||+++|
T Consensus       166 avi~Eil~~dG~~~~~~~~~~fA~~~~l~~isi~dli~yr~~~e  209 (209)
T d1g57a_         166 GVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHE  209 (209)
T ss_dssp             EEEEEBBCTTSSBCCHHHHHHHHHHTTCEEEEHHHHHHHHHHHC
T ss_pred             EEEEEEecCCCcccCHHHHHHHHHHcCCCEEEHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999876
>d1tksa_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Candida albicans [TaxId: 5476]} Back     information, alignment and structure
>d1k4ia_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Magnaporthe grisea [TaxId: 148305]} Back     information, alignment and structure
>d1snna_ d.115.1.2 (A:) 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d2bz1a1 c.144.1.1 (A:1-174) GTP cyclohydrolase II, RibA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure