Citrus Sinensis ID: 009394

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-----
MDSSSISSTAASFVTLKFRCFDPTYAYSATPNHRRSFVTSSRSLTPCATNSNGSMATTENSERKIITGEAGYVLEDVPHFSDYISDLPTHPNPLQDNPSYSVVKQHFVDVDDSVAQNIVVHQDSPRGRHFRRVGPREKVYFESDDVHACIVTCGGLCPGLNTVIREIVCGLYYMYGVHKVLGIEGGYRGFYARNTIPLTPKIVNGIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYVLGGDGTQKGASAIFEEIRRRGLKVAVAGIPKTIDNDIPIIDKSFGFDTAVEEAQRAISAAHVEAESFENGIGVVKLMGRYSGFIAMYATIASRDVDCCLIPESPFYLEGPGGLFEYIEKRLKENGHMVIVIAEGAGQELLSEIMHTMDQQDASGNKLLQDVGLWISQKIRDHFGKKRKMTINLKYIDPTYMIRAVPSNASDNVYCTLLAHSAIHGAMAGYTGFTVGPVNGRHAYIPFYRITERQNRVVITDRMWARLLSSTNQPSFLDPKKVKQSKEEGKLDTQLFNHAPKILNN
cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccEEEccccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccccHHcHHcHHcccccEEEcccccccHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHHccccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHccccccEEEEEEccccccHHHHHHccccccccEEEEccccccccccHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHccccccEEEEEccEEEEEcHHHHHHcccccccccHHHHHHHHHcccccccccHHHHHHHHHccccccccccccccccc
ccccccccccccccccEEEEccccccccccccHHccccccccccccccccccccccccccHHHHHccccccHHHHHHHHHHHHcccccccccccccccccccccEEEEcccccccHHHcccccccccccHcccccccEEEEcccccEEEEEEcccccccHHHHHHHHHHHHHHHccccEEEEEcccccccccccEEEccHHHHHcHHccccEEEEcccccccHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHHHccccEEEEEEEEccccccccccccEcHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHcccccEEEEcccccccccccHHHHHHHHHHHHcccEEEEEEccccHHHccHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEEEcccHEEccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEccEEEEEEHHHHHHcccccccccHHHHHHHHHcccccHcccHHHHHHHHHcccccccccccEEEEcc
mdsssisstaASFVTLkfrcfdptyaysatpnhrrsfvtssrsltpcatnsngsmattenserkiitgeagyvledvphfsdyisdlpthpnplqdnpsysvvkqhfvdvddsvAQNIvvhqdsprgrhfrrvgprekvyfesddVHACIVtcgglcpglnTVIREIVCGLYYMYGVHKVlgieggyrgfyarntipltpkivngihkrggtilgtsrgghdtskIVDSIqdrginqvyvlggdgtqkgASAIFEEIRRRGLKVavagipktidndipiidksfgfDTAVEEAQRAISAAHVEAESFENGIGVVKLMGRYSGFIAMYATIASRdvdcclipespfylegpggLFEYIEKRLKENGHMVIVIAEGAGQELLSEIMHTMDQQDASGNKLLQDVGLWISQKIRDHFGkkrkmtinlkyidptymiravpsnasdnVYCTLLAHSAIHgamagytgftvgpvngrhayipfyriterQNRVVITDRMWARLLsstnqpsfldpkkvkqskeegkldtqlfnhapkilnn
mdsssissTAASFVTLKFRCFDPTYaysatpnhrrsfvtssrsltpcatnsngsmattenseRKIITGEAGYVLEDVPHFSDYISDLPTHPNPLQDNPSYSVVKQHFVDVDDSVAQNivvhqdsprgrhfrrvGPREKVYFESDDVHACIVTCGGLCPGLNTVIREIVCGLYYMYGVHKVLGIEGGYRGFYARNTIPLTPKIVNGIHKRGGtilgtsrgghdTSKIVDSIQDRGINQVYVLGGDGTQKGASAIFEEIRRRGLKVavagipktidndipiiDKSFGFDTAVEEAQRAISAAhveaesfenGIGVVKLMGRYSGFIAMYATIASRDVDCCLIPESPFYLEGPGGLFEYIEKRLKENGHMVIVIAEGAGQELLSEIMHTMDQQDASGNKLLQDVGLWISQKIrdhfgkkrkmtinlkyidptYMIRAVPSNASDNVYCTLLAHSAIHGAMAGYTGFTVGPVNGRHAYIPFYRITERQNRVVITDRMWARLlsstnqpsfldpkkvkqskeegkldtqlfnhapkilnn
MDsssisstaasFVTLKFRCFDPTYAYSATPNHRRSFVTSSRSLTPCATNSNGSMATTENSERKIITGEAGYVLEDVPHFSDYISDLPTHPNPLQDNPSYSVVKQHFVDVDDSVAQNIVVHQDSPRGRHFRRVGPREKVYFESDDVHACIVTCGGLCPGLNTVIREIVCGLYYMYGVHKVLGIEGGYRGFYARNTIPLTPKIVNGIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYVLGGDGTQKGASAIFEEIRRRGLKVAVAGIPKTIDNDIPIIDKSFGFDTAVEEAQRAISAAHVEAESFENGIGVVKLMGRYSGFIAMYATIASRDVDCCLIPESPFYLEGPGGLFEYIEKRLKENGHMVIVIAEGAGQELLSEIMHTMDQQDASGNKLLQDVGLWISQKIRDHFGKKRKMTINLKYIDPTYMIRAVPSNASDNVYCTLLAHSAIHGAMAGYTGFTVGPVNGRHAYIPFYRITERQNRVVITDRMWARLLSSTNQPSFLDPKKVKQSKEEGKLDTQLFNHAPKILNN
**********ASFVTLKFRCFDPTYAYSAT**********************************IITGEAGYVLEDVPHFSDYISDL************YSVVKQHFVDVDDSVAQNIVVHQD***GRHFRRVGPREKVYFESDDVHACIVTCGGLCPGLNTVIREIVCGLYYMYGVHKVLGIEGGYRGFYARNTIPLTPKIVNGIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYVLGGDGTQKGASAIFEEIRRRGLKVAVAGIPKTIDNDIPIIDKSFGFDTAVEEAQRAISAAHVEAESFENGIGVVKLMGRYSGFIAMYATIASRDVDCCLIPESPFYLEGPGGLFEYIEKRLKENGHMVIVIAEGAGQELLSEIMHTM******GNKLLQDVGLWISQKIRDHFGKKRKMTINLKYIDPTYMIRAVPSNASDNVYCTLLAHSAIHGAMAGYTGFTVGPVNGRHAYIPFYRITERQNRVVITDRMWARLL*************************************
****************************************************************IITGEAGYVLEDVPHFSDYISDLPTHPNPLQDNPSYSVVKQHFVDVDDSVAQNIVVHQDSPRGRHFRRVGPREKVYFESDDVHACIVTCGGLCPGLNTVIREIVCGLYYMYGVHKVLGIEGGYRGFYARNTIPLTPKIVNGIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYVLGGDGTQKGASAIFEEIRRRGLKVAVAGIPKTIDNDIPIIDKSFGFDTAVEEAQRAISAAHVEAESFENGIGVVKLMGRYSGFIAMYATIASRDVDCCLIPESPFYLEGPGGLFEYIEKRLKENGHMVIVIAEGAGQELLS************GNKLLQDVGLWISQKIRDHFGKKRKMTINLKYIDPTYMIRAVPSNASDNVYCTLLAHSAIHGAMAGYTGFTVGPVNGRHAYIPFYRITERQNRVVITDRMWARLLSSTNQP*******************************
*********AASFVTLKFRCFDPTYAYSATPNHRRSFVTSSRSLTPCATN**********SERKIITGEAGYVLEDVPHFSDYISDLPTHPNPLQDNPSYSVVKQHFVDVDDSVAQNIVVHQDSPRGRHFRRVGPREKVYFESDDVHACIVTCGGLCPGLNTVIREIVCGLYYMYGVHKVLGIEGGYRGFYARNTIPLTPKIVNGIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYVLGGDGTQKGASAIFEEIRRRGLKVAVAGIPKTIDNDIPIIDKSFGFDTAVEEAQRAISAAHVEAESFENGIGVVKLMGRYSGFIAMYATIASRDVDCCLIPESPFYLEGPGGLFEYIEKRLKENGHMVIVIAEGAGQELLSEIMHTMDQQDASGNKLLQDVGLWISQKIRDHFGKKRKMTINLKYIDPTYMIRAVPSNASDNVYCTLLAHSAIHGAMAGYTGFTVGPVNGRHAYIPFYRITERQNRVVITDRMWARLLSSTNQPSFL************KLDTQLFNHAPKILNN
************FVTLKFRCFDPTYAYSATPNHRRSF******L************TTENSERKIITGEAGYVLEDVPHFSDYISDLPTHPNPLQDNPSYSVVKQHFVDVDDSVAQNIVVHQDSPRGRHFRRVGPREKVYFESDDVHACIVTCGGLCPGLNTVIREIVCGLYYMYGVHKVLGIEGGYRGFYARNTIPLTPKIVNGIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYVLGGDGTQKGASAIFEEIRRRGLKVAVAGIPKTIDNDIPIIDKSFGFDTAVEEAQRAISAAHVEAESFENGIGVVKLMGRYSGFIAMYATIASRDVDCCLIPESPFYLEGPGGLFEYIEKRLKENGHMVIVIAEGAGQELLSEIMHTMDQQDASGNKLLQDVGLWISQKIRDHFGKKRKMTINLKYIDPTYMIRAVPSNASDNVYCTLLAHSAIHGAMAGYTGFTVGPVNGRHAYIPFYRITERQNRVVITDRMWARLLSSTNQPSFLDPKKVKQSKEEGKLDTQLFNHAPKIL**
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MDSSSISSTAASFVTLKFRCFDPTYAYSATPNHRRSFVTSSRSLTPCATNSNGSMATTENSERKIITGEAGYVLEDVPHFSDYISDLPTHPNPLQDNPSYSVVKQHFVDVDDSVAQNIVVHQDSPRGRHFRRVGPREKVYFESDDVHACIVTCGGLCPGLNTVIREIVCGLYYMYGVHKVLGIEGGYRGFYARNTIPLTPKIVNGIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYVLGGDGTQKGASAIFEEIRRRGLKVAVAGIPKTIDNDIPIIDKSFGFDTAVEEAQRAISAAHVEAESFENGIGVVKLMGRYSGFIAMYATIASRDVDCCLIPESPFYLEGPGGLFEYIEKRLKENGHMVIVIAEGAGQELLSEIMHTMDQQDASGNKLLQDVGLWISQKIRDHFGKKRKMTINLKYIDPTYMIRAVPSNASDNVYCTLLAHSAIHGAMAGYTGFTVGPVNGRHAYIPFYRITERQNRVVITDRMWARLLSSTNQPSFLDPKKVKQSKEEGKLDTQLFNHAPKILNN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query535 2.2.26 [Sep-21-2011]
Q94AA4489 6-phosphofructokinase 3 O yes no 0.865 0.946 0.816 0.0
Q9C5J7485 6-phosphofructokinase 7 O no no 0.863 0.952 0.782 0.0
Q9M0F9473 6-phosphofructokinase 1 O no no 0.841 0.951 0.812 0.0
Q9M076462 6-phosphofructokinase 6 O no no 0.839 0.971 0.780 0.0
Q9FKG3530 6-phosphofructokinase 4, no no 0.816 0.824 0.743 0.0
Q9FIK0444 6-phosphofructokinase 2 O no no 0.790 0.952 0.553 1e-135
Q8VYN6537 6-phosphofructokinase 5, no no 0.712 0.709 0.534 1e-114
Q59126341 Pyrophosphate--fructose 6 N/A no 0.480 0.753 0.362 8e-36
Q9AGC0341 Pyrophosphate--fructose 6 yes no 0.551 0.865 0.328 1e-31
O08333342 6-phosphofructokinase 1 O yes no 0.478 0.748 0.341 1e-31
>sp|Q94AA4|K6PF3_ARATH 6-phosphofructokinase 3 OS=Arabidopsis thaliana GN=PFK3 PE=1 SV=1 Back     alignment and function desciption
 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/464 (81%), Positives = 419/464 (90%), Gaps = 1/464 (0%)

Query: 55  MATTENSERKIITGEAGYVLEDVPHFSDYISDLPTHPNPLQDNPSYSVVKQHFVDVDDSV 114
           M+T E+S+ KII G  GYVLEDVPH SDY+  LPT+PNPLQDNP+YSVVKQ+FVD DDSV
Sbjct: 1   MSTVESSKPKIINGSCGYVLEDVPHLSDYLPGLPTYPNPLQDNPAYSVVKQYFVDADDSV 60

Query: 115 AQNIVVHQDSPRGRHFRRVGPREKVYFESDDVHACIVTCGGLCPGLNTVIREIVCGLYYM 174
            Q IVVH+D PRG HFRR GPR+KVYFESD+VHACIVTCGGLCPGLNTVIREIV  L YM
Sbjct: 61  PQKIVVHKDGPRGIHFRRAGPRQKVYFESDEVHACIVTCGGLCPGLNTVIREIVSSLSYM 120

Query: 175 YGVHKVLGIEGGYRGFYARNTIPLTPKIVNGIHKRGGTILGTSRGGHDTSKIVDSIQDRG 234
           YGV ++LGI+GGYRGFYA+NT+ L  K+VN IHKRGGTILGTSRGGHDT+KIVDSIQDRG
Sbjct: 121 YGVKRILGIDGGYRGFYAKNTVSLDSKVVNDIHKRGGTILGTSRGGHDTTKIVDSIQDRG 180

Query: 235 INQVYVLGGDGTQKGASAIFEEIRRRGLKVAVAGIPKTIDNDIPIIDKSFGFDTAVEEAQ 294
           INQVY++GGDGTQ+GAS IFEEIRRRGLKVAV GIPKTIDNDIP+IDKSFGFDTAVEEAQ
Sbjct: 181 INQVYIIGGDGTQRGASVIFEEIRRRGLKVAVIGIPKTIDNDIPVIDKSFGFDTAVEEAQ 240

Query: 295 RAISAAHVEAESFENGIGVVKLMGRYSGFIAMYATIASRDVDCCLIPESPFYLEGPGGLF 354
           RAI+AAHVEAES ENGIGVVKLMGRYSGFIAMYAT+ASRDVDCCLIPESPFYLEG GGLF
Sbjct: 241 RAINAAHVEAESIENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGEGGLF 300

Query: 355 EYIEKRLKENGHMVIVIAEGAGQELLSEIMHTMDQQDASGNKLLQDVGLWISQKIRDHFG 414
           EYIEKRLKE+GHMV+VIAEGAGQ+L+S+ M +M  +DASGNKLL+DVGLW+SQ I+DHF 
Sbjct: 301 EYIEKRLKESGHMVLVIAEGAGQDLMSKSMESMTLKDASGNKLLKDVGLWLSQSIKDHFN 360

Query: 415 KKRKMTINLKYIDPTYMIRAVPSNASDNVYCTLLAHSAIHGAMAGYTGFTVGPVNGRHAY 474
           +K KM +NLKYIDPTYMIRAVPSNASDNVYCTLLA SA+HGAMAGYTG+  G VNGR  Y
Sbjct: 361 QK-KMVMNLKYIDPTYMIRAVPSNASDNVYCTLLAQSAVHGAMAGYTGYISGLVNGRQTY 419

Query: 475 IPFYRITERQNRVVITDRMWARLLSSTNQPSFLDPKKVKQSKEE 518
           IPFYRITE+QN VVITDRMWARLLSSTNQPSFL PK V  +KE+
Sbjct: 420 IPFYRITEKQNHVVITDRMWARLLSSTNQPSFLGPKDVFDNKEK 463

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 1
>sp|Q9C5J7|K6PF7_ARATH 6-phosphofructokinase 7 OS=Arabidopsis thaliana GN=PFK7 PE=1 SV=1 Back     alignment and function description
>sp|Q9M0F9|K6PF1_ARATH 6-phosphofructokinase 1 OS=Arabidopsis thaliana GN=PFK1 PE=1 SV=1 Back     alignment and function description
>sp|Q9M076|K6PF6_ARATH 6-phosphofructokinase 6 OS=Arabidopsis thaliana GN=PFK6 PE=1 SV=1 Back     alignment and function description
>sp|Q9FKG3|K6PF4_ARATH 6-phosphofructokinase 4, chloroplastic OS=Arabidopsis thaliana GN=PFK4 PE=1 SV=1 Back     alignment and function description
>sp|Q9FIK0|K6PF2_ARATH 6-phosphofructokinase 2 OS=Arabidopsis thaliana GN=PFK2 PE=1 SV=1 Back     alignment and function description
>sp|Q8VYN6|K6PF5_ARATH 6-phosphofructokinase 5, chloroplastic OS=Arabidopsis thaliana GN=PFK5 PE=1 SV=1 Back     alignment and function description
>sp|Q59126|PFP_AMYME Pyrophosphate--fructose 6-phosphate 1-phosphotransferase OS=Amycolatopsis methanolica GN=pfp PE=1 SV=2 Back     alignment and function description
>sp|Q9AGC0|PFP_AMYMD Pyrophosphate--fructose 6-phosphate 1-phosphotransferase OS=Amycolatopsis mediterranei GN=pfp PE=3 SV=1 Back     alignment and function description
>sp|O08333|K6PF1_STRCO 6-phosphofructokinase 1 OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=pfkA1 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query535
255549790543 phosphofructokinase, putative [Ricinus c 0.975 0.961 0.772 0.0
225445037539 PREDICTED: 6-phosphofructokinase 3-like 0.973 0.966 0.781 0.0
297738727491 unnamed protein product [Vitis vinifera] 0.884 0.963 0.839 0.0
356515641507 PREDICTED: 6-phosphofructokinase 3-like 0.880 0.928 0.813 0.0
255550894485 phosphofructokinase, putative [Ricinus c 0.884 0.975 0.800 0.0
356507939509 PREDICTED: 6-phosphofructokinase 3-like 0.872 0.917 0.813 0.0
255546259632 phosphofructokinase, putative [Ricinus c 0.844 0.715 0.848 0.0
225429400488 PREDICTED: 6-phosphofructokinase 3 [Viti 0.882 0.967 0.805 0.0
224091357498 predicted protein [Populus trichocarpa] 0.867 0.931 0.829 0.0
147799033488 hypothetical protein VITISV_023326 [Viti 0.882 0.967 0.803 0.0
>gi|255549790|ref|XP_002515946.1| phosphofructokinase, putative [Ricinus communis] gi|223544851|gb|EEF46366.1| phosphofructokinase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  862 bits (2227), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/533 (77%), Positives = 467/533 (87%), Gaps = 11/533 (2%)

Query: 8   STAASFVTLKFRCFDPTYAYSATPNH-RRSFVTSSRSLTP-------CATNSNGSMATTE 59
           S++AS  T +FRCFDPT ++ AT NH  R +  ++   +        C T  + +  +  
Sbjct: 5   SSSASLSTPRFRCFDPTNSFHATHNHSHRPYFFTTSFSSSSNNSSTICTTGDDSTKESMR 64

Query: 60  NSERKIITGEAGYVLEDVPHFSDYISDLPTHPNPLQDNPSYSVVKQHFVDVDDSVAQNIV 119
            SE K + G AGYVLEDVPHF+DYISDLPT+PNPLQDNP+YSVVKQ+FV+ DD+VAQ IV
Sbjct: 65  KSEPKTVAGPAGYVLEDVPHFTDYISDLPTYPNPLQDNPAYSVVKQYFVNADDTVAQKIV 124

Query: 120 VHQDSPRGRHFRRVGPREKVYFESDDVHACIVTCGGLCPGLNTVIREIVCGLYYMYGVHK 179
           V ++SPRG HFRR GPR+KVYF+SD+VHACIVTCGGLCPGLNTVIRE+VCGL+ MYGV++
Sbjct: 125 VQKESPRGTHFRRAGPRQKVYFDSDEVHACIVTCGGLCPGLNTVIRELVCGLHDMYGVNR 184

Query: 180 VLGIEGGYRGFYARNTIPLTPKIVNGIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVY 239
           +LGIEGGY+GFYARNTI LTPK+VN IHKRGGTILGTSRGG+DTSKIVDSIQDRGINQVY
Sbjct: 185 ILGIEGGYKGFYARNTILLTPKVVNDIHKRGGTILGTSRGGYDTSKIVDSIQDRGINQVY 244

Query: 240 VLGGDGTQKGASAIFEEIRRRGLKVAVAGIPKTIDNDIPIIDKSFGFDTAVEEAQRAISA 299
           ++GGDGTQ+GAS IFEEIRRRGLKVAV GIPKTIDNDIP+IDKSFGFDTAVEEAQRAI+A
Sbjct: 245 IIGGDGTQRGASVIFEEIRRRGLKVAVVGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINA 304

Query: 300 AHVEAESFENGIGVVKLMGRYSGFIAMYATIASRDVDCCLIPESPFYLEGPGGLFEYIEK 359
           AHVEAESFENGIGVVKLMGRYSGFIAM+AT+ASRDVDCCLIPESPFYLEGPGGLFEYI K
Sbjct: 305 AHVEAESFENGIGVVKLMGRYSGFIAMFATLASRDVDCCLIPESPFYLEGPGGLFEYIRK 364

Query: 360 RLKENGHMVIVIAEGAGQELLSEIMHTMDQQDASGNKLLQDVGLWISQKIRDHFGKKRKM 419
           RLKE+ HMVIVIAEGAGQELLSE M TMD+QDASGN+LLQDVGLWISQKI+DHF + +KM
Sbjct: 365 RLKEHAHMVIVIAEGAGQELLSESMRTMDKQDASGNRLLQDVGLWISQKIKDHFSQDQKM 424

Query: 420 TINLKYIDPTYMIRAVPSNASDNVYCTLLAHSAIHGAMAGYTGFTVGPVNGRHAYIPFYR 479
            I LKYIDPTYMIRAVPSNASDNVYCTLLAHSAIHGAMAGYTGFTVGPVNGRH++IPF+R
Sbjct: 425 NITLKYIDPTYMIRAVPSNASDNVYCTLLAHSAIHGAMAGYTGFTVGPVNGRHSHIPFHR 484

Query: 480 ITERQNRVVITDRMWARLLSSTNQPSFLDPKKVKQSKEEGKLDTQLF---NHA 529
           + ER+N+VVITDRMWARLLSSTNQPSFLDP  V + K E + ++ L    NHA
Sbjct: 485 VNERRNKVVITDRMWARLLSSTNQPSFLDPMHVIEDKLEEEPESPLLDGENHA 537

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225445037|ref|XP_002283274.1| PREDICTED: 6-phosphofructokinase 3-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297738727|emb|CBI27972.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356515641|ref|XP_003526507.1| PREDICTED: 6-phosphofructokinase 3-like [Glycine max] Back     alignment and taxonomy information
>gi|255550894|ref|XP_002516495.1| phosphofructokinase, putative [Ricinus communis] gi|223544315|gb|EEF45836.1| phosphofructokinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356507939|ref|XP_003522720.1| PREDICTED: 6-phosphofructokinase 3-like [Glycine max] Back     alignment and taxonomy information
>gi|255546259|ref|XP_002514189.1| phosphofructokinase, putative [Ricinus communis] gi|223546645|gb|EEF48143.1| phosphofructokinase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|225429400|ref|XP_002275308.1| PREDICTED: 6-phosphofructokinase 3 [Vitis vinifera] gi|296081592|emb|CBI20597.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224091357|ref|XP_002309230.1| predicted protein [Populus trichocarpa] gi|222855206|gb|EEE92753.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147799033|emb|CAN74837.1| hypothetical protein VITISV_023326 [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query535
TAIR|locus:2136849489 PFK3 "phosphofructokinase 3" [ 0.865 0.946 0.816 4e-209
TAIR|locus:2165046485 PFK7 "phosphofructokinase 7" [ 0.863 0.952 0.782 1.5e-202
TAIR|locus:2118249473 PFK1 "phosphofructokinase 1" [ 0.871 0.985 0.789 7.3e-201
TAIR|locus:2134108462 PFK6 "phosphofructokinase 6" [ 0.848 0.982 0.777 6.1e-197
TAIR|locus:2151571530 PFK4 "phosphofructokinase 4" [ 0.816 0.824 0.743 2.2e-183
TAIR|locus:2160897444 PFK2 "phosphofructokinase 2" [ 0.790 0.952 0.553 2.6e-125
TAIR|locus:2041208537 PFK5 "phosphofructokinase 5" [ 0.691 0.689 0.544 3.6e-105
TIGR_CMR|CHY_1349361 CHY_1349 "phosphofructokinase" 0.577 0.855 0.328 2.7e-36
UNIPROTKB|P65690343 pfkA "6-phosphofructokinase" [ 0.566 0.883 0.333 1.2e-33
TIGR_CMR|GSU_1703363 GSU_1703 "6-phosphofructokinas 0.401 0.592 0.382 6.4e-30
TAIR|locus:2136849 PFK3 "phosphofructokinase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2022 (716.8 bits), Expect = 4.0e-209, P = 4.0e-209
 Identities = 379/464 (81%), Positives = 419/464 (90%)

Query:    55 MATTENSERKIITGEAGYVLEDVPHFSDYISDLPTHPNPLQDNPSYSVVKQHFVDVDDSV 114
             M+T E+S+ KII G  GYVLEDVPH SDY+  LPT+PNPLQDNP+YSVVKQ+FVD DDSV
Sbjct:     1 MSTVESSKPKIINGSCGYVLEDVPHLSDYLPGLPTYPNPLQDNPAYSVVKQYFVDADDSV 60

Query:   115 AQNIVVHQDSPRGRHFRRVGPREKVYFESDDVHACIVTCGGLCPGLNTVIREIVCGLYYM 174
              Q IVVH+D PRG HFRR GPR+KVYFESD+VHACIVTCGGLCPGLNTVIREIV  L YM
Sbjct:    61 PQKIVVHKDGPRGIHFRRAGPRQKVYFESDEVHACIVTCGGLCPGLNTVIREIVSSLSYM 120

Query:   175 YGVHKVLGIEGGYRGFYARNTIPLTPKIVNGIHKRGGTILGTSRGGHDTSKIVDSIQDRG 234
             YGV ++LGI+GGYRGFYA+NT+ L  K+VN IHKRGGTILGTSRGGHDT+KIVDSIQDRG
Sbjct:   121 YGVKRILGIDGGYRGFYAKNTVSLDSKVVNDIHKRGGTILGTSRGGHDTTKIVDSIQDRG 180

Query:   235 INQVYVLGGDGTQKGASAIFEEIRRRGLKVAVAGIPKTIDNDIPIIDKSFGFDTAVEEAQ 294
             INQVY++GGDGTQ+GAS IFEEIRRRGLKVAV GIPKTIDNDIP+IDKSFGFDTAVEEAQ
Sbjct:   181 INQVYIIGGDGTQRGASVIFEEIRRRGLKVAVIGIPKTIDNDIPVIDKSFGFDTAVEEAQ 240

Query:   295 RAISAAHVEAESFENGIGVVKLMGRYSGFIAMYATIASRDVDCCLIPESPFYLEGPGGLF 354
             RAI+AAHVEAES ENGIGVVKLMGRYSGFIAMYAT+ASRDVDCCLIPESPFYLEG GGLF
Sbjct:   241 RAINAAHVEAESIENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGEGGLF 300

Query:   355 EYIEKRLKENGHMVIVIAEGAGQELLSEIMHTMDQQDASGNKLLQDVGLWISQKIRDHFG 414
             EYIEKRLKE+GHMV+VIAEGAGQ+L+S+ M +M  +DASGNKLL+DVGLW+SQ I+DHF 
Sbjct:   301 EYIEKRLKESGHMVLVIAEGAGQDLMSKSMESMTLKDASGNKLLKDVGLWLSQSIKDHFN 360

Query:   415 KKRKMTINLKYIDPTYMIRAVPSNASDNVYCTLLAHSAIHGAMAGYTGFTVGPVNGRHAY 474
             +K KM +NLKYIDPTYMIRAVPSNASDNVYCTLLA SA+HGAMAGYTG+  G VNGR  Y
Sbjct:   361 QK-KMVMNLKYIDPTYMIRAVPSNASDNVYCTLLAQSAVHGAMAGYTGYISGLVNGRQTY 419

Query:   475 IPFYRITERQNRVVITDRMWARLLSSTNQPSFLDPKKVKQSKEE 518
             IPFYRITE+QN VVITDRMWARLLSSTNQPSFL PK V  +KE+
Sbjct:   420 IPFYRITEKQNHVVITDRMWARLLSSTNQPSFLGPKDVFDNKEK 463
GO:0003872 "6-phosphofructokinase activity" evidence=IEA;ISS;IDA
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0005945 "6-phosphofructokinase complex" evidence=IEA;ISS
GO:0006096 "glycolysis" evidence=ISS;IDA
GO:0005829 "cytosol" evidence=IDA
GO:0010053 "root epidermal cell differentiation" evidence=IMP
TAIR|locus:2165046 PFK7 "phosphofructokinase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118249 PFK1 "phosphofructokinase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134108 PFK6 "phosphofructokinase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151571 PFK4 "phosphofructokinase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2160897 PFK2 "phosphofructokinase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041208 PFK5 "phosphofructokinase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_1349 CHY_1349 "phosphofructokinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
UNIPROTKB|P65690 pfkA "6-phosphofructokinase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_1703 GSU_1703 "6-phosphofructokinase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q94AA4K6PF3_ARATH2, ., 7, ., 1, ., 1, 10.81680.86540.9468yesno
Q9M0F9K6PF1_ARATH2, ., 7, ., 1, ., 1, 10.81230.84110.9513nono
Q9C5J7K6PF7_ARATH2, ., 7, ., 1, ., 1, 10.78230.86350.9525nono
Q9FKG3K6PF4_ARATH2, ., 7, ., 1, ., 1, 10.74370.81680.8245nono
Q9M076K6PF6_ARATH2, ., 7, ., 1, ., 1, 10.78090.83920.9718nono

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer2.7.1.110.979
3rd Layer2.7.10.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00016633001
SubName- Full=Chromosome chr11 scaffold_13, whole genome shotgun sequence; (491 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00014624001
RecName- Full=Glucose-6-phosphate isomerase; EC=5.3.1.9; (340 aa)
     •• 0.930
GSVIVG00015125001
RecName- Full=Glucose-6-phosphate isomerase; EC=5.3.1.9; (623 aa)
     •• 0.909
GSVIVG00025935001
SubName- Full=Chromosome chr12 scaffold_36, whole genome shotgun sequence; (563 aa)
  •  •••0.909
GSVIVG00013290001
SubName- Full=Chromosome undetermined scaffold_453, whole genome shotgun sequence; (561 aa)
  •  • •0.908
GSVIVG00038435001
SubName- Full=Chromosome chr16 scaffold_94, whole genome shotgun sequence; (620 aa)
     •• 0.903
GSVIVG00026404001
SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (620 aa)
     •• 0.903
GSVIVG00006209001
SubName- Full=Chromosome chr1 scaffold_166, whole genome shotgun sequence; (441 aa)
     •• 0.901
GSVIVG00018168001
SubName- Full=Chromosome chr13 scaffold_17, whole genome shotgun sequence; (661 aa)
     •• 0.900
GSVIVG00038234001
RecName- Full=Mannose-6-phosphate isomerase; EC=5.3.1.8; (420 aa)
     •  0.899
GSVIVG00036826001
RecName- Full=Fructose-bisphosphate aldolase; EC=4.1.2.13; (396 aa)
     •  0.899

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query535
PLN02564484 PLN02564, PLN02564, 6-phosphofructokinase 0.0
PRK06830443 PRK06830, PRK06830, diphosphate--fructose-6-phosph 0.0
PTZ00286459 PTZ00286, PTZ00286, 6-phospho-1-fructokinase; Prov 0.0
PLN02884411 PLN02884, PLN02884, 6-phosphofructokinase 1e-163
COG0205347 COG0205, PfkA, 6-phosphofructokinase [Carbohydrate 1e-69
TIGR02483324 TIGR02483, PFK_mixed, phosphofructokinase 2e-54
PRK03202320 PRK03202, PRK03202, 6-phosphofructokinase; Provisi 9e-52
cd00363338 cd00363, PFK, Phosphofructokinase, a key regulator 1e-43
TIGR02482301 TIGR02482, PFKA_ATP, 6-phosphofructokinase 6e-36
PRK14071360 PRK14071, PRK14071, 6-phosphofructokinase; Provisi 3e-34
pfam00365279 pfam00365, PFK, Phosphofructokinase 9e-34
cd00763317 cd00763, Bacterial_PFK, Phosphofructokinase, a key 3e-33
TIGR02478746 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukar 2e-21
PRK14072416 PRK14072, PRK14072, 6-phosphofructokinase; Provisi 2e-20
PRK06555403 PRK06555, PRK06555, pyrophosphate--fructose-6-phos 4e-19
TIGR02478 746 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukar 5e-19
cd00764762 cd00764, Eukaryotic_PFK, Phosphofructokinase, a ke 8e-18
PTZ00287 1419 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisi 2e-17
cd00764 762 cd00764, Eukaryotic_PFK, Phosphofructokinase, a ke 4e-17
TIGR02477539 TIGR02477, PFKA_PPi, diphosphate--fructose-6-phosp 1e-16
cd00765550 cd00765, Pyrophosphate_PFK, Phosphofructokinase, a 2e-15
PTZ00468 1328 PTZ00468, PTZ00468, phosphofructokinase family pro 1e-13
PRK07085555 PRK07085, PRK07085, diphosphate--fructose-6-phosph 2e-11
PLN03028 610 PLN03028, PLN03028, pyrophosphate--fructose-6-phos 3e-11
PLN02251568 PLN02251, PLN02251, pyrophosphate-dependent phosph 4e-10
>gnl|CDD|178178 PLN02564, PLN02564, 6-phosphofructokinase Back     alignment and domain information 
 Score = 1016 bits (2628), Expect = 0.0
 Identities = 393/477 (82%), Positives = 439/477 (92%)

Query: 59  ENSERKIITGEAGYVLEDVPHFSDYISDLPTHPNPLQDNPSYSVVKQHFVDVDDSVAQNI 118
            +S+ KI+TG+AGYVLEDVPH +DY+ DLPT+PNPLQDNP+YSVVKQ+FV+ DD+VAQ I
Sbjct: 1   GSSKPKIVTGDAGYVLEDVPHLTDYLPDLPTYPNPLQDNPAYSVVKQYFVNEDDTVAQKI 60

Query: 119 VVHQDSPRGRHFRRVGPREKVYFESDDVHACIVTCGGLCPGLNTVIREIVCGLYYMYGVH 178
           VVH+DSPRG HFRR GPR+KVYFESD+V ACIVTCGGLCPGLNTVIREIVCGL YMYGV 
Sbjct: 61  VVHKDSPRGTHFRRAGPRQKVYFESDEVRACIVTCGGLCPGLNTVIREIVCGLSYMYGVT 120

Query: 179 KVLGIEGGYRGFYARNTIPLTPKIVNGIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQV 238
           ++LGI+GGYRGFY+RNTIPLTPK+VN IHKRGGTILGTSRGGHDTSKIVDSIQDRGINQV
Sbjct: 121 RILGIDGGYRGFYSRNTIPLTPKVVNDIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQV 180

Query: 239 YVLGGDGTQKGASAIFEEIRRRGLKVAVAGIPKTIDNDIPIIDKSFGFDTAVEEAQRAIS 298
           Y++GGDGTQKGAS I+EEIRRRGLKVAVAGIPKTIDNDIP+IDKSFGFDTAVEEAQRAI+
Sbjct: 181 YIIGGDGTQKGASVIYEEIRRRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAIN 240

Query: 299 AAHVEAESFENGIGVVKLMGRYSGFIAMYATIASRDVDCCLIPESPFYLEGPGGLFEYIE 358
           AAHVEAES ENGIG+VKLMGRYSGFIAMYAT+ASRDVDCCLIPESPFYLEG GGLFE+IE
Sbjct: 241 AAHVEAESVENGIGLVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGKGGLFEFIE 300

Query: 359 KRLKENGHMVIVIAEGAGQELLSEIMHTMDQQDASGNKLLQDVGLWISQKIRDHFGKKRK 418
           KRLKENGHMVIV+AEGAGQ+L++E M + D QDASGNKLL DVGLW+SQKI+DHF K +K
Sbjct: 301 KRLKENGHMVIVVAEGAGQDLIAESMESSDLQDASGNKLLLDVGLWLSQKIKDHFTKVKK 360

Query: 419 MTINLKYIDPTYMIRAVPSNASDNVYCTLLAHSAIHGAMAGYTGFTVGPVNGRHAYIPFY 478
           M INLKYIDPTYMIRA+PSNASDNVYCTLLAHSA+HGAMAGYTGFTVGPVNGRHAYIPFY
Sbjct: 361 MPINLKYIDPTYMIRAIPSNASDNVYCTLLAHSAVHGAMAGYTGFTVGPVNGRHAYIPFY 420

Query: 479 RITERQNRVVITDRMWARLLSSTNQPSFLDPKKVKQSKEEGKLDTQLFNHAPKILNN 535
           RITE+QN+VVITDRMWARLLSSTNQPSFL PK V ++K E +   +L +     ++ 
Sbjct: 421 RITEKQNKVVITDRMWARLLSSTNQPSFLSPKDVLEAKREDEEAEKLDDGPLSSIDV 477

Length = 484
>gnl|CDD|235869 PRK06830, PRK06830, diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>gnl|CDD|185539 PTZ00286, PTZ00286, 6-phospho-1-fructokinase; Provisional Back     alignment and domain information
>gnl|CDD|178472 PLN02884, PLN02884, 6-phosphofructokinase Back     alignment and domain information
>gnl|CDD|223283 COG0205, PfkA, 6-phosphofructokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|233887 TIGR02483, PFK_mixed, phosphofructokinase Back     alignment and domain information
>gnl|CDD|235111 PRK03202, PRK03202, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|238216 cd00363, PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|213713 TIGR02482, PFKA_ATP, 6-phosphofructokinase Back     alignment and domain information
>gnl|CDD|184487 PRK14071, PRK14071, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|109425 pfam00365, PFK, Phosphofructokinase Back     alignment and domain information
>gnl|CDD|238388 cd00763, Bacterial_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|233884 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>gnl|CDD|237600 PRK14072, PRK14072, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|180620 PRK06555, PRK06555, pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated Back     alignment and domain information
>gnl|CDD|233884 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>gnl|CDD|238389 cd00764, Eukaryotic_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|240345 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisional Back     alignment and domain information
>gnl|CDD|238389 cd00764, Eukaryotic_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|131530 TIGR02477, PFKA_PPi, diphosphate--fructose-6-phosphate 1-phosphotransferase Back     alignment and domain information
>gnl|CDD|238390 cd00765, Pyrophosphate_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>gnl|CDD|185647 PTZ00468, PTZ00468, phosphofructokinase family protein; Provisional Back     alignment and domain information
>gnl|CDD|235930 PRK07085, PRK07085, diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>gnl|CDD|215543 PLN03028, PLN03028, pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>gnl|CDD|215140 PLN02251, PLN02251, pyrophosphate-dependent phosphofructokinase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 535
PLN02564484 6-phosphofructokinase 100.0
PRK06830443 diphosphate--fructose-6-phosphate 1-phosphotransfe 100.0
PTZ00286459 6-phospho-1-fructokinase; Provisional 100.0
PLN02884411 6-phosphofructokinase 100.0
PRK06555403 pyrophosphate--fructose-6-phosphate 1-phosphotrans 100.0
PRK14071360 6-phosphofructokinase; Provisional 100.0
PRK14072416 6-phosphofructokinase; Provisional 100.0
TIGR02483324 PFK_mixed phosphofructokinase. Members of this fam 100.0
cd00363338 PFK Phosphofructokinase, a key regulatory enzyme i 100.0
cd00763317 Bacterial_PFK Phosphofructokinase, a key regulator 100.0
TIGR02482301 PFKA_ATP 6-phosphofructokinase. 6-phosphofructokin 100.0
TIGR02478745 6PF1K_euk 6-phosphofructokinase, eukaryotic type. 100.0
PRK03202320 6-phosphofructokinase; Provisional 100.0
cd00764762 Eukaryotic_PFK Phosphofructokinase, a key regulato 100.0
COG0205347 PfkA 6-phosphofructokinase [Carbohydrate transport 100.0
TIGR02477539 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosp 100.0
cd00764 762 Eukaryotic_PFK Phosphofructokinase, a key regulato 100.0
PRK07085555 diphosphate--fructose-6-phosphate 1-phosphotransfe 100.0
TIGR02478 745 6PF1K_euk 6-phosphofructokinase, eukaryotic type. 100.0
cd00765550 Pyrophosphate_PFK Phosphofructokinase, a key regul 100.0
PLN03028610 pyrophosphate--fructose-6-phosphate 1-phosphotrans 100.0
PLN02251568 pyrophosphate-dependent phosphofructokinase 100.0
PF00365282 PFK: Phosphofructokinase; InterPro: IPR000023 The 100.0
PTZ00468 1328 phosphofructokinase family protein; Provisional 100.0
PTZ00287 1419 6-phosphofructokinase; Provisional 100.0
PTZ002871419 6-phosphofructokinase; Provisional 100.0
PTZ00468 1328 phosphofructokinase family protein; Provisional 100.0
KOG2440 666 consensus Pyrophosphate-dependent phosphofructo-1- 100.0
KOG2440666 consensus Pyrophosphate-dependent phosphofructo-1- 100.0
PRK04761246 ppnK inorganic polyphosphate/ATP-NAD kinase; Revie 93.34
PRK14077287 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 91.97
PRK04885265 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 91.87
PRK03501264 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 89.79
PRK00561259 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 89.57
PRK03372306 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 89.43
PRK01911292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 89.31
PRK14075256 pnk inorganic polyphosphate/ATP-NAD kinase; Provis 89.06
PRK04539296 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 88.83
PRK02649305 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 87.74
PRK03378292 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 87.42
PF01513285 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Me 87.12
PLN02935508 Bifunctional NADH kinase/NAD(+) kinase 86.05
PRK13054300 lipid kinase; Reviewed 84.78
PRK13337304 putative lipid kinase; Reviewed 84.62
PRK01231295 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 84.4
TIGR01918431 various_sel_PB selenoprotein B, glycine/betaine/sa 83.44
cd06321271 PBP1_ABC_sugar_binding_like_11 Periplasmic sugar-b 83.43
PRK13055334 putative lipid kinase; Reviewed 83.31
COG3199355 Predicted inorganic polyphosphate/ATP-NAD kinase [ 83.31
PF00532279 Peripla_BP_1: Periplasmic binding proteins and sug 82.95
PRK03708277 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 82.84
PRK11914306 diacylglycerol kinase; Reviewed 82.29
COG1609333 PurR Transcriptional regulators [Transcription] 82.03
PRK02155291 ppnK NAD(+)/NADH kinase family protein; Provisiona 81.57
PLN02958481 diacylglycerol kinase/D-erythro-sphingosine kinase 81.54
PRK02645305 ppnK inorganic polyphosphate/ATP-NAD kinase; Provi 81.47
TIGR01917431 gly_red_sel_B glycine reductase, selenoprotein B. 80.99
PLN02727986 NAD kinase 80.68
>PLN02564 6-phosphofructokinase Back     alignment and domain information 
Probab=100.00  E-value=4.3e-125  Score=1007.55  Aligned_cols=472  Identities=83%  Similarity=1.337  Sum_probs=447.8

Q ss_pred             CCccceeccCCccccccccchhhhccCCCCCCCCCCCCCccccccccccccChhHHHHHhhcccCCccccccccCCcccc
Q 009394           60 NSERKIITGEAGYVLEDVPHFSDYISDLPTHPNPLQDNPSYSVVKQHFVDVDDSVAQNIVVHQDSPRGRHFRRVGPREKV  139 (535)
Q Consensus        60 ~~~~~~~~~~~~~~~e~V~~l~~~~p~~p~~~~pl~~n~~~~~~~~~~V~~t~~V~~~~~~~~~~~r~~~f~~agpr~~~  139 (535)
                      .++.|+++|++||++|+||||.+|+|+.|++++||..|+.++.....||++++.|++.+..++...++.+|++||||+++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~v~~~~~v~~~~~~~~~~~~~~~~~~agpr~~i   81 (484)
T PLN02564          2 SSKPKIVTGDAGYVLEDVPHLTDYLPDLPTYPNPLQDNPAYSVVKQYFVNEDDTVAQKIVVHKDSPRGTHFRRAGPRQKV   81 (484)
T ss_pred             CCcCccccCCCceeeccCcchhhcCCCcCCCCCccCCCcccccccceEeCCCCeEEEeecccccccCCccceecCCcceE
Confidence            46789999999999999999999999999999999999999999999999999999988877667788999999999999


Q ss_pred             ccCCCCeeEEEEccCCCCCchhHHHHHHHHHHHHhcCCeEEEEEccccccccCCCeeeCCHhHHhchhcccCcceeccCC
Q 009394          140 YFESDDVHACIVTCGGLCPGLNTVIREIVCGLYYMYGVHKVLGIEGGYRGFYARNTIPLTPKIVNGIHKRGGTILGTSRG  219 (535)
Q Consensus       140 ~~~~~~~~iaIvtsGG~apGmNavIr~vv~~l~~~~~~~~V~Gi~~G~~GL~~~~~~~L~~~~V~~i~~~GGs~LGTsR~  219 (535)
                      ||+|+++|||||||||||||||+|||++|+.+.+.|++.+||||++||+||+++++++|+|+.|++|+++|||+|||||+
T Consensus        82 ~f~p~~~riaIlTsGGd~PGmNavIRavv~~l~~~yg~~~V~Gi~~Gy~GL~~~~~i~Lt~~~V~~i~~~GGTiLGTsR~  161 (484)
T PLN02564         82 YFESDEVRACIVTCGGLCPGLNTVIREIVCGLSYMYGVTRILGIDGGYRGFYSRNTIPLTPKVVNDIHKRGGTILGTSRG  161 (484)
T ss_pred             EEcCcceEEEEECCCCCCccHhHHHHHHHHHHHHhCCCeEEEEEccChHHhCCCCeEeCCHHHhhcHhhCCCceeccCCC
Confidence            99999999999999999999999999999998877888899999999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHHHHhCCcEEEEecCCcchHHHHHHHHHHHHcCCCeeEeeeccccccCccCCCcccCchhHHHHHHHHHHH
Q 009394          220 GHDTSKIVDSIQDRGINQVYVLGGDGTQKGASAIFEEIRRRGLKVAVAGIPKTIDNDIPIIDKSFGFDTAVEEAQRAISA  299 (535)
Q Consensus       220 ~~d~~ki~~~l~~~~Id~LvvIGGdgS~~~A~~L~~~~~~~g~~i~VvgIPkTIDNDI~gtD~S~GFdTAv~~~~~ai~~  299 (535)
                      ++++++++++|++++||+||+|||||||++|++|+++++++|++|+||||||||||||++||+|||||||+++++++|++
T Consensus       162 ~~~~~~iv~~L~~~~Id~LivIGGDGS~~gA~~L~e~~~~~g~~i~VIGIPKTIDNDI~~tD~T~GFdTAv~~~~~aI~~  241 (484)
T PLN02564        162 GHDTSKIVDSIQDRGINQVYIIGGDGTQKGASVIYEEIRRRGLKVAVAGIPKTIDNDIPVIDKSFGFDTAVEEAQRAINA  241 (484)
T ss_pred             cchHHHHHHHHHHhCCCEEEEECCchHHHHHHHHHHHHHHcCCCceEEEecccccCCCcCcccCCCHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhcCcceEEEEEecCCCccHHHHHHhHhcCCccEEecCCCCCCCCCcchHHHHHHHHHHhCCcEEEEEecCCCchh
Q 009394          300 AHVEAESFENGIGVVKLMGRYSGFIAMYATIASRDVDCCLIPESPFYLEGPGGLFEYIEKRLKENGHMVIVIAEGAGQEL  379 (535)
Q Consensus       300 i~~~A~S~~~rv~iVEvMGR~sG~LAl~aaLAs~~ad~ilIPE~pf~l~~~~~l~e~I~~rl~~~~~~vIVVaEGa~~~~  379 (535)
                      +++||.|+++||||||+|||+|||||++++||+++||+|||||.||+++++.+++++|++|+++++|+|||||||+++.+
T Consensus       242 i~~tA~S~~~rv~iVEvMGR~aG~LAl~aaLA~~gad~iLIPE~pf~le~~~~ll~~i~~rl~~~~~~VIVVAEGagq~~  321 (484)
T PLN02564        242 AHVEAESVENGIGLVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGKGGLFEFIEKRLKENGHMVIVVAEGAGQDL  321 (484)
T ss_pred             HHHHHHhcCCCEEEEEECCCCHHHHHHHHHHhhCCCCEEEeCCCCCCcchHHHHHHHHHHHHhccCCEEEEEeCCCccch
Confidence            99999999889999999999999999999999966999999999999998889999999999999999999999999888


Q ss_pred             hHHHhhhcccccccCCccchhhHHHHHHHHHHHhCCcceeEEEeeeeCCCccccCCCCCcchHHHHHHHHHHHHHHHHcC
Q 009394          380 LSEIMHTMDQQDASGNKLLQDVGLWISQKIRDHFGKKRKMTINLKYIDPTYMIRAVPSNASDNVYCTLLAHSAIHGAMAG  459 (535)
Q Consensus       380 ~~~~~~~~~~~Da~Gn~~l~~ig~~L~~~I~~~~~~~~~~~~~lkyidpgy~qRg~~p~a~Dr~~a~~LG~~AV~~a~aG  459 (535)
                      +.+.++....+|++||++|++++.||+++|+++++.+.++.+++||++|||+|||++|+++|++||++||+.|||++|+|
T Consensus       322 ~~~~~~~~~~~Da~Gn~~l~dig~~La~~I~~~~~~~~~~~~~~r~i~lgy~qRgg~p~a~Dri~a~~lG~~AV~~~~aG  401 (484)
T PLN02564        322 IAESMESSDLQDASGNKLLLDVGLWLSQKIKDHFTKVKKMPINLKYIDPTYMIRAIPSNASDNVYCTLLAHSAVHGAMAG  401 (484)
T ss_pred             hhhhhcccccccccCCcccCcHHHHHHHHHHHHhhhcccCCceEEEecCCchhcCCCCcHHHHHHHHHHHHHHHHHHHcC
Confidence            77655444568999999999999999999999995455566789999999999999999999999999999999999999


Q ss_pred             CCceEEEEeCCeeeeeeHHHHHhhCCcCCCChHHHHHHHHhcCCCCCCChHHhhhhhhhcccccccccCCCc
Q 009394          460 YTGFTVGPVNGRHAYIPFYRITERQNRVVITDRMWARLLSSTNQPSFLDPKKVKQSKEEGKLDTQLFNHAPK  531 (535)
Q Consensus       460 ~tG~mVgi~~~~~~~iPl~~v~~~~k~v~~~~~~w~~~l~~tgqp~f~~~~~~~~~~~~~~~~~~~~~~~~~  531 (535)
                      +||+||+++|++++++||++++..+|+|++++++|+++|++||||+|++++++.+.+++++..++..+..|.
T Consensus       402 ~tg~mVg~~~~~~~~vPi~~~~~~~~~v~~~~~~w~~~l~~t~qp~f~~~~~~~~~~~~~~~~~~~~~~~~~  473 (484)
T PLN02564        402 YTGFTVGPVNGRHAYIPFYRITEKQNKVVITDRMWARLLSSTNQPSFLSPKDVLEAKREDEEAEKLDDGPLS  473 (484)
T ss_pred             CCCEEEEEECCEEEEEEHHHHhccCCccCCChHHHHHHHHHcCCCCccCchhhhhhhhhccccccccCCCcc
Confidence            999999999999999999999999999999999999999999999999999999988777776666665554

>PRK06830 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>PTZ00286 6-phospho-1-fructokinase; Provisional Back     alignment and domain information
>PLN02884 6-phosphofructokinase Back     alignment and domain information
>PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated Back     alignment and domain information
>PRK14071 6-phosphofructokinase; Provisional Back     alignment and domain information
>PRK14072 6-phosphofructokinase; Provisional Back     alignment and domain information
>TIGR02483 PFK_mixed phosphofructokinase Back     alignment and domain information
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>TIGR02482 PFKA_ATP 6-phosphofructokinase Back     alignment and domain information
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>PRK03202 6-phosphofructokinase; Provisional Back     alignment and domain information
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>COG0205 PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR02477 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosphotransferase Back     alignment and domain information
>cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>PRK07085 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type Back     alignment and domain information
>cd00765 Pyrophosphate_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate Back     alignment and domain information
>PLN03028 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional Back     alignment and domain information
>PLN02251 pyrophosphate-dependent phosphofructokinase Back     alignment and domain information
>PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes [] Back     alignment and domain information
>PTZ00468 phosphofructokinase family protein; Provisional Back     alignment and domain information
>PTZ00287 6-phosphofructokinase; Provisional Back     alignment and domain information
>PTZ00287 6-phosphofructokinase; Provisional Back     alignment and domain information
>PTZ00468 phosphofructokinase family protein; Provisional Back     alignment and domain information
>KOG2440 consensus Pyrophosphate-dependent phosphofructo-1-kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>KOG2440 consensus Pyrophosphate-dependent phosphofructo-1-kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed Back     alignment and domain information
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2 Back     alignment and domain information
>PLN02935 Bifunctional NADH kinase/NAD(+) kinase Back     alignment and domain information
>PRK13054 lipid kinase; Reviewed Back     alignment and domain information
>PRK13337 putative lipid kinase; Reviewed Back     alignment and domain information
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family Back     alignment and domain information
>cd06321 PBP1_ABC_sugar_binding_like_11 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems Back     alignment and domain information
>PRK13055 putative lipid kinase; Reviewed Back     alignment and domain information
>COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only] Back     alignment and domain information
>PF00532 Peripla_BP_1: Periplasmic binding proteins and sugar binding domain of LacI family; InterPro: IPR001761 This family includes the periplasmic binding proteins, and the LacI family transcriptional regulators Back     alignment and domain information
>PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>PRK11914 diacylglycerol kinase; Reviewed Back     alignment and domain information
>COG1609 PurR Transcriptional regulators [Transcription] Back     alignment and domain information
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional Back     alignment and domain information
>PLN02958 diacylglycerol kinase/D-erythro-sphingosine kinase Back     alignment and domain information
>PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional Back     alignment and domain information
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B Back     alignment and domain information
>PLN02727 NAD kinase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query535
2hig_A487 Crystal Structure Of Phosphofructokinase Apoenzyme 2e-71
1mto_A319 Crystal Structure Of A Phosphofructokinase Mutant F 6e-23
3pfk_A319 Phosphofructokinase. Structure And Control Length = 2e-22
6pfk_A319 Phosphofructokinase, Inhibited T-State Length = 319 2e-22
1zxx_A319 The Crystal Structure Of Phosphofructokinase From L 4e-20
4a3s_A319 Crystal Structure Of Pfk From Bacillus Subtilis Len 3e-19
1pfk_A320 Crystal Structure Of The Complex Of Phosphofructoki 4e-18
1kzh_A555 Structure Of A Pyrophosphate-dependent Phosphofruct 4e-15
3opy_B 941 Crystal Structure Of Pichia Pastoris Phosphofructok 9e-13
3o8o_A 787 Structure Of Phosphofructokinase From Saccharomyces 1e-12
3k2q_A420 Crystal Structure Of Pyrophosphate-Dependent Phosph 7e-12
3opy_A 989 Crystal Structure Of Pichia Pastoris Phosphofructok 9e-12
3o8l_A 762 Structure Of Phosphofructokinase From Rabbit Skelet 1e-11
3o8o_B 766 Structure Of Phosphofructokinase From Saccharomyces 8e-11
3hno_A419 Crystal Structure Of Pyrophosphate-Dependent Phosph 3e-06
>pdb|2HIG|A Chain A, Crystal Structure Of Phosphofructokinase Apoenzyme From Trypanosoma Brucei. Length = 487 Back     alignment and structure 
Iteration: 1

 Score =  266 bits (681), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 162/418 (38%), Positives = 237/418 (56%), Gaps = 25/418 (5%)
Query: 90  HPNPLQDNPSYSVVKQHFVDVDDSVAQNIVVHQDSPRGRHFRRVGP--------REKVYF 141
           +PNP +   S    +  F D  D +  N    +D P   +   V P        R +++F
Sbjct: 39  YPNPSKKYSS----RTEFRDKTDYIMYN-PRPRDEPSSENPVSVSPLLCELAAARSRIHF 93
Query: 142 ESDDVHACIVTCGGLCPGLNTVIREIVCGLYYMYGVHKVLGIEGGYRGFYARNT---IPL 198
              +    IVTCGG+CPGLN VIR I      +Y V +V+G   GY G   + +   I L
Sbjct: 94  NPTETTIGIVTCGGICPGLNDVIRSITLTGINVYNVKRVIGFRFGYWGLSKKGSQTAIEL 153
Query: 199 TPKIVNGIHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYVLGGDGTQKGASAIFEEIR 258
               V  IH  GGTILG+SRG  D  ++VD+++  G+N ++ +GGDGTQ+GA  I +E +
Sbjct: 154 HRGRVTNIHHYGGTILGSSRGPQDPKEMVDTLERLGVNILFTVGGDGTQRGALVISQEAK 213
Query: 259 RRGLKVAVAGIPKTIDNDIPIIDKSFGFDTAVEEAQRAISAAHVEAESFENGIGVVKLMG 318
           RRG+ ++V G+PKTIDND+    ++FGF TAVE+A +AI AA+ EA S   G+GVVKLMG
Sbjct: 214 RRGVDISVFGVPKTIDNDLSFSHRTFGFQTAVEKAVQAIRAAYAEAVSANYGVGVVKLMG 273
Query: 319 RYSGFIAMYATIASRDVDCCLIPESPFYLEGPGGLFEYIEKRLKENGHMVIVIAEGAGQE 378
           R SGFIA  A +AS   + CL+PE+P   +    +   +E+R   +   VI++AEG GQ+
Sbjct: 274 RDSGFIAAQAAVASAQANICLVPENPISEQ---EVMSLLERRFCHSRSCVIIVAEGFGQD 330
Query: 379 LLSEIMHTMDQQDASGNKLLQDVGLWISQKIRDHF--GKKRKMTINLKYIDPTYMIRAVP 436
                       DASGNK L D+G+ +++K++      K R     +KYIDP+YMIRA P
Sbjct: 331 W----GRGSGGYDASGNKKLIDIGVILTEKVKAFLKANKSRYPDSTVKYIDPSYMIRACP 386
Query: 437 SNASDNVYCTLLAHSAIHGAMAGYTGFTVGPVNGRHAYIPFYRITERQNRVVITDRMW 494
            +A+D ++C  LA  A+H AMAG TG  +   +  +  +P    T  +  + +  ++W
Sbjct: 387 PSANDALFCATLATLAVHEAMAGATGCIIAMRHNNYILVPIKVATSVRRVLDLRGQLW 444
>pdb|1MTO|A Chain A, Crystal Structure Of A Phosphofructokinase Mutant From Bacillus Stearothermophilus Bound With Fructose-6-Phosphate Length = 319 Back     alignment and structure
>pdb|3PFK|A Chain A, Phosphofructokinase. Structure And Control Length = 319 Back     alignment and structure
>pdb|6PFK|A Chain A, Phosphofructokinase, Inhibited T-State Length = 319 Back     alignment and structure
>pdb|1ZXX|A Chain A, The Crystal Structure Of Phosphofructokinase From Lactobacillus Delbrueckii Length = 319 Back     alignment and structure
>pdb|4A3S|A Chain A, Crystal Structure Of Pfk From Bacillus Subtilis Length = 319 Back     alignment and structure
>pdb|1PFK|A Chain A, Crystal Structure Of The Complex Of Phosphofructokinase From Escherichia Coli With Its Reaction Products Length = 320 Back     alignment and structure
>pdb|1KZH|A Chain A, Structure Of A Pyrophosphate-dependent Phosphofructokinase From The Lyme Disease Spirochete Borrelia Burgdorferi Length = 555 Back     alignment and structure
>pdb|3OPY|B Chain B, Crystal Structure Of Pichia Pastoris Phosphofructokinase In The T- State Length = 941 Back     alignment and structure
>pdb|3O8O|A Chain A, Structure Of Phosphofructokinase From Saccharomyces Cerevisiae Length = 787 Back     alignment and structure
>pdb|3K2Q|A Chain A, Crystal Structure Of Pyrophosphate-Dependent Phosphofructokinase From Marinobacter Aquaeolei, Northeast Structural Genomics Consortium Target Mqr88 Length = 420 Back     alignment and structure
>pdb|3OPY|A Chain A, Crystal Structure Of Pichia Pastoris Phosphofructokinase In The T- State Length = 989 Back     alignment and structure
>pdb|3O8L|A Chain A, Structure Of Phosphofructokinase From Rabbit Skeletal Muscle Length = 762 Back     alignment and structure
>pdb|3O8O|B Chain B, Structure Of Phosphofructokinase From Saccharomyces Cerevisiae Length = 766 Back     alignment and structure
>pdb|3HNO|A Chain A, Crystal Structure Of Pyrophosphate-Dependent Phosphofructokinase From Nitrosospira Multiformis. Northeast Structural Genomics Consortium Target Id Nmr42 Length = 419 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query535
2hig_A487 6-phospho-1-fructokinase; transferase; 2.40A {Tryp 0.0
2f48_A555 Diphosphate--fructose-6-phosphate 1-phosphotransf; 1e-104
4a3s_A319 6-phosphofructokinase; transferase, glycolysis, de 1e-60
1pfk_A320 Phosphofructokinase; transferase(phosphotransferas 1e-60
1zxx_A319 6-phosphofructokinase; allosteric regulation, lact 4e-59
3hno_A419 Pyrophosphate-dependent phosphofructokinase; struc 3e-55
3o8o_B766 6-phosphofructokinase subunit beta; transferase; H 2e-51
3o8o_B 766 6-phosphofructokinase subunit beta; transferase; H 1e-42
3o8l_A762 6-phosphofructokinase, muscle type; transferase; H 2e-50
3o8l_A 762 6-phosphofructokinase, muscle type; transferase; H 2e-46
3opy_A989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 2e-49
3opy_A 989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 2e-43
3o8o_A787 6-phosphofructokinase subunit alpha; transferase; 4e-49
3o8o_A 787 6-phosphofructokinase subunit alpha; transferase; 2e-43
3opy_B941 6-phosphofructo-1-kinase beta-subunit; ATP binding 9e-48
3opy_B 941 6-phosphofructo-1-kinase beta-subunit; ATP binding 3e-45
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-06
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* Length = 487 Back     alignment and structure
 Score =  579 bits (1494), Expect = 0.0
 Identities = 165/481 (34%), Positives = 251/481 (52%), Gaps = 28/481 (5%)

Query: 54  SMATTENSERKIITGEAGYVLEDVPHFSDYISDLP--THPNPLQDNPSYSVVKQHFVDVD 111
           ++ +      K++      +L  V      +  LP   +PNP +   S       F D  
Sbjct: 2   AVESRSRVTSKLVKA-HRAMLNSVTQEDLKVDRLPGADYPNPSKKYSSR----TEFRDKT 56

Query: 112 DSVAQNIVV-------HQDSPRGRHFRRVGPREKVYFESDDVHACIVTCGGLCPGLNTVI 164
           D +  N          +  S           R +++F   +    IVTCGG+CPGLN VI
Sbjct: 57  DYIMYNPRPRDEPSSENPVSVSPLLCELAAARSRIHFNPTETTIGIVTCGGICPGLNDVI 116

Query: 165 REIVCGLYYMYGVHKVLGIEGGYRGFY---ARNTIPLTPKIVNGIHKRGGTILGTSRGGH 221
           R I      +Y V +V+G   GY G     ++  I L    V  IH  GGTILG+SRG  
Sbjct: 117 RSITLTGINVYNVKRVIGFRFGYWGLSKKGSQTAIELHRGRVTNIHHYGGTILGSSRGPQ 176

Query: 222 DTSKIVDSIQDRGINQVYVLGGDGTQKGASAIFEEIRRRGLKVAVAGIPKTIDNDIPIID 281
           D  ++VD+++  G+N ++ +GGDGTQ+GA  I +E +RRG+ ++V G+PKTIDND+    
Sbjct: 177 DPKEMVDTLERLGVNILFTVGGDGTQRGALVISQEAKRRGVDISVFGVPKTIDNDLSFSH 236

Query: 282 KSFGFDTAVEEAQRAISAAHVEAESFENGIGVVKLMGRYSGFIAMYATIASRDVDCCLIP 341
           ++FGF TAVE+A +AI AA+ EA S   G+GVVKLMGR SGFIA  A +AS   + CL+P
Sbjct: 237 RTFGFQTAVEKAVQAIRAAYAEAVSANYGVGVVKLMGRDSGFIAAQAAVASAQANICLVP 296

Query: 342 ESPFYLEGPGGLFEYIEKRLKENGHMVIVIAEGAGQELLSEIMHTMDQQDASGNKLLQDV 401
           E+P   +    +   +E+R   +   VI++AEG GQ+            DASGNK L D+
Sbjct: 297 ENPISEQ---EVMSLLERRFCHSRSCVIIVAEGFGQDWGRG----SGGYDASGNKKLIDI 349

Query: 402 GLWISQKIRDHFGK--KRKMTINLKYIDPTYMIRAVPSNASDNVYCTLLAHSAIHGAMAG 459
           G+ +++K++        R     +KYIDP+YMIRA P +A+D ++C  LA  A+H AMAG
Sbjct: 350 GVILTEKVKAFLKANKSRYPDSTVKYIDPSYMIRACPPSANDALFCATLATLAVHEAMAG 409

Query: 460 YTGFTVGPVNGRHAYIPFYRITERQNRVVITDRMWARLLSSTNQPSFLDPKKVKQSKEEG 519
            TG  +   +  +  +P    T  +  + +  ++W ++   T         ++ +  E  
Sbjct: 410 ATGCIIAMRHNNYILVPIKVATSVRRVLDLRGQLWRQVREITV--DLGSDVRLARKLEIR 467

Query: 520 K 520
           +
Sbjct: 468 R 468
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A* Length = 555 Back     alignment and structure
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A* Length = 319 Back     alignment and structure
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A Length = 320 Back     alignment and structure
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp} Length = 319 Back     alignment and structure
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A Length = 419 Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 766 Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 766 Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Length = 762 Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Length = 762 Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 989 Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 989 Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 787 Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 787 Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 941 Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 941 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query535
2hig_A487 6-phospho-1-fructokinase; transferase; 2.40A {Tryp 100.0
1zxx_A319 6-phosphofructokinase; allosteric regulation, lact 100.0
1pfk_A320 Phosphofructokinase; transferase(phosphotransferas 100.0
3hno_A419 Pyrophosphate-dependent phosphofructokinase; struc 100.0
4a3s_A319 6-phosphofructokinase; transferase, glycolysis, de 100.0
2f48_A555 Diphosphate--fructose-6-phosphate 1-phosphotransf; 100.0
3o8l_A762 6-phosphofructokinase, muscle type; transferase; H 100.0
3o8o_A787 6-phosphofructokinase subunit alpha; transferase; 100.0
3o8o_B766 6-phosphofructokinase subunit beta; transferase; H 100.0
3opy_B941 6-phosphofructo-1-kinase beta-subunit; ATP binding 100.0
3opy_A989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 100.0
3o8l_A 762 6-phosphofructokinase, muscle type; transferase; H 100.0
3o8o_B 766 6-phosphofructokinase subunit beta; transferase; H 100.0
3o8o_A 787 6-phosphofructokinase subunit alpha; transferase; 100.0
3opy_A 989 6-phosphofructo-1-kinase alpha-subunit; ATP bindin 100.0
3opy_B 941 6-phosphofructo-1-kinase beta-subunit; ATP binding 100.0
2an1_A292 Putative kinase; structural genomics, PSI, protein 94.67
3g1w_A305 Sugar ABC transporter; sugar-binding protein, baci 92.95
2i2c_A272 Probable inorganic polyphosphate/ATP-NAD kinase 1; 92.89
1z0s_A278 Probable inorganic polyphosphate/ATP-NAD kinase; A 91.62
1yt5_A258 Inorganic polyphosphate/ATP-NAD kinase; domain 1: 84.43
3l49_A291 ABC sugar (ribose) transporter, periplasmic substr 84.35
3h5o_A339 Transcriptional regulator GNTR; transcription regu 84.14
3dbi_A338 Sugar-binding transcriptional regulator, LACI FAM; 83.34
3kjx_A344 Transcriptional regulator, LACI family; LACL famil 80.7
>2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* Back     alignment and structure
Probab=100.00  E-value=2.1e-103  Score=843.76  Aligned_cols=424  Identities=38%  Similarity=0.625  Sum_probs=384.9

Q ss_pred             CccccccccchhhhccCC--CCCCCCCCCCCccccccccccccChhHHHHHhhcccC-------CccccccccCCccccc
Q 009394           70 AGYVLEDVPHFSDYISDL--PTHPNPLQDNPSYSVVKQHFVDVDDSVAQNIVVHQDS-------PRGRHFRRVGPREKVY  140 (535)
Q Consensus        70 ~~~~~e~V~~l~~~~p~~--p~~~~pl~~n~~~~~~~~~~V~~t~~V~~~~~~~~~~-------~r~~~f~~agpr~~~~  140 (535)
                      .-+.++.|+.+.-..|.+  |+++|||..|..    ...||++++.|+..+....+.       .....|+++|||+++|
T Consensus        17 ~~~~~~~~~~~~~~i~~lg~~~~~~p~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~agpr~~i~   92 (487)
T 2hig_A           17 HRAMLNSVTQEDLKVDRLPGADYPNPSKKYSS----RTEFRDKTDYIMYNPRPRDEPSSENPVSVSPLLCELAAARSRIH   92 (487)
T ss_dssp             TTCSCSSCCTTTTCCEECSCCCEECTTCCGGG----GGGSBSSCCEEESCCCBCC-----CCBBSCCCEEEECCCBSEES
T ss_pred             ccccccCCCccccccCcCCCCCCCCcccccCC----CCeeeCCCCEEEEeeeccCCCccccccccchHHHHHcCCcceee
Confidence            447789998886666766  778999977665    688999999998876542221       1234799999999999


Q ss_pred             cCCCCeeEEEEccCCCCCchhHHHHHHHHHHHHhcCCeEEEEEccccccccC---CCeeeCCHhHHhchhcccCcceecc
Q 009394          141 FESDDVHACIVTCGGLCPGLNTVIREIVCGLYYMYGVHKVLGIEGGYRGFYA---RNTIPLTPKIVNGIHKRGGTILGTS  217 (535)
Q Consensus       141 ~~~~~~~iaIvtsGG~apGmNavIr~vv~~l~~~~~~~~V~Gi~~G~~GL~~---~~~~~L~~~~V~~i~~~GGs~LGTs  217 (535)
                      |+++.+||||+||||||||||++||++|+.+...|+..+||||++||+||++   +++++|+|++|++|+++|||+||||
T Consensus        93 f~~~~~rIgIltsGGdaPGmNaaIravv~~a~~~~g~~~V~Gi~~G~~GLl~~~~~~~~~L~~~~V~~i~~~GGTiLGTs  172 (487)
T 2hig_A           93 FNPTETTIGIVTCGGICPGLNDVIRSITLTGINVYNVKRVIGFRFGYWGLSKKGSQTAIELHRGRVTNIHHYGGTILGSS  172 (487)
T ss_dssp             SCGGGCEEEEEECSSCCTTHHHHHHHHHHHHHHHHCCSEEEECSTGGGGGSHHHHTTCEEECHHHHTTGGGSSSCSSCCC
T ss_pred             ecCCCcEEEEEecCCCcchhhHHHHHHHHHHHHhCCCcEEEEEccCHHHhhhccCCCEEECCHHHHHHHHhCCCCeeccC
Confidence            9999999999999999999999999999998766777799999999999964   6899999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCcEEEEecCCcchHHHHHHHHHHHHcCCCeeEeeeccccccCccCCCcccCchhHHHHHHHHH
Q 009394          218 RGGHDTSKIVDSIQDRGINQVYVLGGDGTQKGASAIFEEIRRRGLKVAVAGIPKTIDNDIPIIDKSFGFDTAVEEAQRAI  297 (535)
Q Consensus       218 R~~~d~~ki~~~l~~~~Id~LvvIGGdgS~~~A~~L~~~~~~~g~~i~VvgIPkTIDNDI~gtD~S~GFdTAv~~~~~ai  297 (535)
                      |++++.++++++|++++||+||+||||||+++|++|++++.++|++|+||||||||||||++||+|||||||+++++++|
T Consensus       173 R~~~~~~~i~~~l~~~~Id~LvvIGGdgS~~~A~~L~e~~~~~g~~i~vVGIPkTIDNDl~gTD~T~GFdTAv~~~~eaI  252 (487)
T 2hig_A          173 RGPQDPKEMVDTLERLGVNILFTVGGDGTQRGALVISQEAKRRGVDISVFGVPKTIDNDLSFSHRTFGFQTAVEKAVQAI  252 (487)
T ss_dssp             CSCCCHHHHHHHHHHHTCSEEEEEECHHHHHHHHHHHHHHHHHTCCCEEEEEECCTTSSCCCSSCCTTHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHHHHHHHhCCCceEEeccccccCCCCCCCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhhcCcceEEEEEecCCCccHHHHHHhHhcCCccEEecCCCCCCCCCcchHHHHHHHHHHhCCcEEEEEecCCCc
Q 009394          298 SAAHVEAESFENGIGVVKLMGRYSGFIAMYATIASRDVDCCLIPESPFYLEGPGGLFEYIEKRLKENGHMVIVIAEGAGQ  377 (535)
Q Consensus       298 ~~i~~~A~S~~~rv~iVEvMGR~sG~LAl~aaLAs~~ad~ilIPE~pf~l~~~~~l~e~I~~rl~~~~~~vIVVaEGa~~  377 (535)
                      +++++||.||++||||||||||+|||||+++|||+++||+|||||+||+++   +++++|++|+++++|+|||||||+++
T Consensus       253 d~i~~tA~Sh~~rv~vVEVMGR~aG~LAl~agLA~g~ad~ilIPE~p~~l~---~i~~~i~~r~~~k~~~IIvVaEGag~  329 (487)
T 2hig_A          253 RAAYAEAVSANYGVGVVKLMGRDSGFIAAQAAVASAQANICLVPENPISEQ---EVMSLLERRFCHSRSCVIIVAEGFGQ  329 (487)
T ss_dssp             HHHHHHHHTSTTEEEEEEECCSSCCHHHHHHHHHHTCCSEEECTTSCCCHH---HHHHHHHHHTTSCSEEEEEEETTTTG
T ss_pred             HHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHhhCCCCEEEeCCCCCCHH---HHHHHHHHHHhcCCcEEEEEeCCCcc
Confidence            999999999988999999999999999999999994499999999999988   89999999998889999999999986


Q ss_pred             hhhHHHhhhcccccccCCccchhhHHHHHHHHHHHhCCcceeE---EEeeeeCCCccccCCCCCcchHHHHHHHHHHHHH
Q 009394          378 ELLSEIMHTMDQQDASGNKLLQDVGLWISQKIRDHFGKKRKMT---INLKYIDPTYMIRAVPSNASDNVYCTLLAHSAIH  454 (535)
Q Consensus       378 ~~~~~~~~~~~~~Da~Gn~~l~~ig~~L~~~I~~~~~~~~~~~---~~lkyidpgy~qRg~~p~a~Dr~~a~~LG~~AV~  454 (535)
                      .+...    ...+|++||+++++++++|+++|+++++. ....   +++|+++|||+|||++||++||+||++||+.||+
T Consensus       330 ~~~~~----~~~~Da~G~~~l~~i~~~l~~~i~~~~~~-~g~~~~~f~~R~~~lGh~QRgg~Psa~Dr~la~~lG~~AV~  404 (487)
T 2hig_A          330 DWGRG----SGGYDASGNKKLIDIGVILTEKVKAFLKA-NKSRYPDSTVKYIDPSYMIRACPPSANDALFCATLATLAVH  404 (487)
T ss_dssp             GGCCC------CBCTTSCBCCCCHHHHHHHHHHHHHHT-TTTTSSSCEEEEECCHHHHHSSCCCHHHHHHHHHHHHHHHH
T ss_pred             ccccc----ccccccccCcchhHHHHHHHHHHHHHHhh-cCccccccceEEccCCcCccCCCCCHHHHHHHHHHHHHHHH
Confidence            55422    23589999999999999999999999842 1111   2688999999999999999999999999999999


Q ss_pred             HHHcCCCceEEEEeCCeeeeeeHHHHHhhCCcCCCChHHHHHHHHhcCCCC
Q 009394          455 GAMAGYTGFTVGPVNGRHAYIPFYRITERQNRVVITDRMWARLLSSTNQPS  505 (535)
Q Consensus       455 ~a~aG~tG~mVgi~~~~~~~iPl~~v~~~~k~v~~~~~~w~~~l~~tgqp~  505 (535)
                      ++++|+||+||++++++++++||+++++..|++++++.||.++++.++||.
T Consensus       405 ~l~~G~tg~mVgi~~~~i~~vPl~ev~~~~k~v~~~~~~w~~~~~~~~~~~  455 (487)
T 2hig_A          405 EAMAGATGCIIAMRHNNYILVPIKVATSVRRVLDLRGQLWRQVREITVDLG  455 (487)
T ss_dssp             HHHTTEESEEEEEETTEEEEEEHHHHTTEEEEECTTSHHHHHHHHHSCCCC
T ss_pred             HHHcCCCCEEEEEECCEEEEEEHHHHHccCCCcCcchHHHHHHHHHhCCcc
Confidence            999999999999999999999999999999999999999999999999986
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp} Back     alignment and structure
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A Back     alignment and structure
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A Back     alignment and structure
>4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A* Back     alignment and structure
>2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A* Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Back     alignment and structure
>3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Back     alignment and structure
>3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Back     alignment and structure
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium} Back     alignment and structure
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125} Back     alignment and structure
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A* Back     alignment and structure
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A* Back     alignment and structure
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima} Back     alignment and structure
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides} Back     alignment and structure
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum} Back     alignment and structure
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12} Back     alignment and structure
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 535
d2f48a1550 c.89.1.1 (A:4-553) Pyrophosphate-dependent phospho 2e-75
d1pfka_320 c.89.1.1 (A:) ATP-dependent phosphofructokinase {E 2e-57
d4pfka_319 c.89.1.1 (A:) ATP-dependent phosphofructokinase {B 2e-56
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Length = 550 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Phosphofructokinase
superfamily: Phosphofructokinase
family: Phosphofructokinase
domain: Pyrophosphate-dependent phosphofructokinase
species: Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]

 Score =  246 bits (629), Expect = 2e-75
 Identities = 80/415 (19%), Positives = 148/415 (35%), Gaps = 78/415 (18%)

Query: 150 IVTCGGLCPGLNTVIREIVCGLYYMYGVHKVLGIEGGYRGFYARNTIPLTPKIVNGIHKR 209
           I+  GG  PG + VI  +   +       K+ G +GG  G    + I LT  ++N     
Sbjct: 74  IILSGGPAPGGHNVISGVFDAIKKFNPNSKLFGFKGGPLGLLENDKIELTESLINSYRNT 133

Query: 210 GGTILGTSRGGH-----DTSKIVDSIQDRGINQVYVLGGDGTQKGASAIFEEIRRRGLKV 264
           GG  + +S           +K +   ++  +N + ++GGD +   A+ + E  ++ G  +
Sbjct: 134 GGFDIVSSGRTKIETEEHYNKALFVAKENNLNAIIIIGGDDSNTNAAILAEYFKKNGENI 193

Query: 265 AVAGIPKTIDNDIP--IIDKSFGFDTAVEEAQRAISAAHVEAESFENGIGVVKLMGRYSG 322
            V G+PKTID D+    I+ SFGFD+A +     I     +A S +     VKLMGR + 
Sbjct: 194 QVIGVPKTIDADLRNDHIEISFGFDSATKIYSELIGNLCRDAMSTKKYWHFVKLMGRSAS 253

Query: 323 FIAMYATIASRDVDCCLIPESPFYLEGPGGLFEYIEKRLKE-----NGHMVIVIAEGAG- 376
            +A+   + +    C +  E     +    + + +   + +     +   V+++ EG   
Sbjct: 254 HVALECALKTHPNICIVSEEVLAKKKTLSEIIDEMVSVILKRSLNGDNFGVVIVPEGLIE 313

Query: 377 -----QELLSEIMHTMD------------------------------------------- 388
                + L+ E+    D                                           
Sbjct: 314 FIPEVKSLMLELCDIFDKNEGEFKGLNIEKMKEIFVAKLSDYMKGVYLSLPLFIQFELIK 373

Query: 389 ---QQDASGNKLLQDV--GLWISQKIRDHFGKKRKMTINLKYIDP-----TYMIRAVPSN 438
              ++D  GN  +  V       + I+      +K         P      Y  R+   +
Sbjct: 374 SILERDPHGNFNVSRVPTEKLFIEMIQSRLNDMKKRGEYKGSFTPVDHFFGYEGRSAFPS 433

Query: 439 ASDNVYCTLLAHSAIHGAMAGYTGFTVGPVNGRHAY-------IPFYRITERQNR 486
             D+ YC  L ++A+   + G TG+     N            +P   +   + R
Sbjct: 434 NFDSDYCYSLGYNAVVLILNGLTGYMSCIKNLNLKPTDWIAGGVPLTMLMNMEER 488
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Length = 320 Back     information, alignment and structure
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} Length = 319 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query535
d4pfka_319 ATP-dependent phosphofructokinase {Bacillus stearo 100.0
d1pfka_320 ATP-dependent phosphofructokinase {Escherichia col 100.0
d2f48a1550 Pyrophosphate-dependent phosphofructokinase {Lyme 100.0
d2qv7a1312 Diacylglycerol kinase DgkB {Staphylococcus aureus 86.45
d2bona1295 Lipid kinase YegS {Escherichia coli [TaxId: 562]} 84.87
d1u0ta_302 Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycob 83.91
d1z0sa1249 Inorganic polyphosphate/ATP-NAD kinase PpnK {Archa 80.61
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Phosphofructokinase
superfamily: Phosphofructokinase
family: Phosphofructokinase
domain: ATP-dependent phosphofructokinase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=100.00  E-value=6.4e-81  Score=639.80  Aligned_cols=310  Identities=29%  Similarity=0.425  Sum_probs=281.9

Q ss_pred             eeEEEEccCCCCCchhHHHHHHHHHHHHhcCCeEEEEEccccccccCCCeeeCCHhHHhchhcccCcceeccCCC-----
Q 009394          146 VHACIVTCGGLCPGLNTVIREIVCGLYYMYGVHKVLGIEGGYRGFYARNTIPLTPKIVNGIHKRGGTILGTSRGG-----  220 (535)
Q Consensus       146 ~~iaIvtsGG~apGmNavIr~vv~~l~~~~~~~~V~Gi~~G~~GL~~~~~~~L~~~~V~~i~~~GGs~LGTsR~~-----  220 (535)
                      +|||||||||||||||++|+++++.+.. + +.+|||+++||+||+++++++|+|+++++|+++|||+|||||++     
T Consensus         2 krIaIl~sGG~~pgiNa~i~~~v~~~~~-~-~~~v~g~~~G~~Gl~~~~~~~l~~~~~~~~~~~gGt~lgs~r~~~~~~~   79 (319)
T d4pfka_           2 KRIGVLTSGGDSPGMNAAIRSVVRKAIY-H-GVEVYGVYHGYAGLIAGNIKKLEVGDVGDIIHRGGTILYTARCPEFKTE   79 (319)
T ss_dssp             CEEEEEEESSCCTTHHHHHHHHHHHHHH-T-TCEEEEESSHHHHHHTTCEEEECGGGGTTCTTCCSCTTCCCCCTTSSSH
T ss_pred             CEEEEECcCCCcHHHHHHHHHHHHHHHH-C-CCEEEEEccchHHhcCCCcccCCHHHHHHHHhcCccccccCCCCccccc
Confidence            3999999999999999999999998864 3 46999999999999999999999999999999999999999984     


Q ss_pred             CcHHHHHHHHHHhCCcEEEEecCCcchHHHHHHHHHHHHcCCCeeEeeeccccccCccCCCcccCchhHHHHHHHHHHHH
Q 009394          221 HDTSKIVDSIQDRGINQVYVLGGDGTQKGASAIFEEIRRRGLKVAVAGIPKTIDNDIPIIDKSFGFDTAVEEAQRAISAA  300 (535)
Q Consensus       221 ~d~~ki~~~l~~~~Id~LvvIGGdgS~~~A~~L~~~~~~~g~~i~VvgIPkTIDNDI~gtD~S~GFdTAv~~~~~ai~~i  300 (535)
                      +++++++++|++++||+||+|||||||++|++|+++      .++|||||||||||+++||+||||+||+++++++|+++
T Consensus        80 ~~~~~~~~~l~~~~I~~li~iGG~~s~~~a~~L~~~------~~~vvgIPkTIDNDl~~td~t~Gf~TA~~~~~~~i~~l  153 (319)
T d4pfka_          80 EGQKKGIEQLKKHGIQGLVVIGGDGSYQGAKKLTEH------GFPCVGVPGTIDNDIPGTDFTIGFDTALNTVIDAIDKI  153 (319)
T ss_dssp             HHHHHHHHHHHHHTCCEEEEEECHHHHHHHHHHHHT------TCCEEEEEBCSSCCCTTCSSCBTHHHHHHHHHHHHHHH
T ss_pred             chhhhHHHHHHHhccceEEEecCchHHHHHHHHHhc------cCceeeeeeeccCCcCCccccccHHHHHHHHHHHHHHH
Confidence            246899999999999999999999999999999763      47799999999999999999999999999999999999


Q ss_pred             HhhhhcCcceEEEEEecCCCccHHHHHHhHhcCCccEEecCCCCCCCCCcchHHHHHHHHHHh-CCcEEEEEecCCCchh
Q 009394          301 HVEAESFENGIGVVKLMGRYSGFIAMYATIASRDVDCCLIPESPFYLEGPGGLFEYIEKRLKE-NGHMVIVIAEGAGQEL  379 (535)
Q Consensus       301 ~~~A~S~~~rv~iVEvMGR~sG~LAl~aaLAs~~ad~ilIPE~pf~l~~~~~l~e~I~~rl~~-~~~~vIVVaEGa~~~~  379 (535)
                      +++|.|++ ||||||+|||+|||||++++||+ +||+|||||.||+++   ++++.|++++++ +++++||||||+... 
T Consensus       154 ~~~a~s~~-rv~ivEvMGR~aG~lA~~~~la~-~a~~iliPE~~~~~~---~~~~~i~~~~~~~k~~~ivvvsEG~~~~-  227 (319)
T d4pfka_         154 RDTATSHE-RTYVIEVMGRHAGDIALWSGLAG-GAETILIPEADYDMN---DVIARLKRGHERGKKHSIIIVAEGVGSG-  227 (319)
T ss_dssp             HHHHHHTT-CEEEEEECCSSCCHHHHHHHHHT-TCSEEECTTSCCCHH---HHHHHHHHHHHTTCSCEEEEEETTTCCH-
T ss_pred             HhhcccCc-ceEEEEecCCCCcHHHHHhhccC-CCcEEEecCCCCCHH---HHHHHHHHHHhhcCCeeEEEEecccchh-
Confidence            99999874 79999999999999999999999 799999999999887   899999998876 689999999999652 


Q ss_pred             hHHHhhhcccccccCCccchhhHHHHHHHHHHHhCCcceeEEEeeeeCCCccccCCCCCcchHHHHHHHHHHHHHHHHcC
Q 009394          380 LSEIMHTMDQQDASGNKLLQDVGLWISQKIRDHFGKKRKMTINLKYIDPTYMIRAVPSNASDNVYCTLLAHSAIHGAMAG  459 (535)
Q Consensus       380 ~~~~~~~~~~~Da~Gn~~l~~ig~~L~~~I~~~~~~~~~~~~~lkyidpgy~qRg~~p~a~Dr~~a~~LG~~AV~~a~aG  459 (535)
                                             ..+.+.+++..+.      .+|+..|||+|||++|+++|+.+|++||..||+++++|
T Consensus       228 -----------------------~~~~~~i~~~~g~------~~r~~~lG~~qRgg~ps~~Dr~~a~~lG~~Av~~~~~g  278 (319)
T d4pfka_         228 -----------------------VDFGRQIQEATGF------ETRVTVLGHVQRGGSPTAFDRVLASRLGARAVELLLEG  278 (319)
T ss_dssp             -----------------------HHHHHHHHHHHCC------CEEEEECGGGGGCSCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             -----------------------hhhhhhhhhhcCc------eeEEeecCchhcCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence                                   2456677777764      35677899999999999999999999999999999999


Q ss_pred             CCceEEEEeCCeeeeeeHHHHHhhCCcCCCChHHHHHHH
Q 009394          460 YTGFTVGPVNGRHAYIPFYRITERQNRVVITDRMWARLL  498 (535)
Q Consensus       460 ~tG~mVgi~~~~~~~iPl~~v~~~~k~v~~~~~~w~~~l  498 (535)
                      +||+||+++++++.++||+++++.+|.++++...+.+.|
T Consensus       279 ~sg~mv~i~~~~~~~vpl~~v~~~~k~v~~~l~~~~~~l  317 (319)
T d4pfka_         279 KGGRCVGIQNNQLVDHDIAEALANKHTIDQRMYALSKEL  317 (319)
T ss_dssp             CCSEEEEEETTEEEEEEHHHHTTSCCCCCHHHHHHHHHH
T ss_pred             CCCeEEEEECCEEEEEcHHHHHhcCCCCCHHHHHHHHhc
Confidence            999999999999999999999998898887544444444
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Back     information, alignment and structure
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure