Citrus Sinensis ID: 009559
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 532 | 2.2.26 [Sep-21-2011] | |||||||
| Q8VYN6 | 537 | 6-phosphofructokinase 5, | yes | no | 0.998 | 0.988 | 0.789 | 0.0 | |
| Q9C5J7 | 485 | 6-phosphofructokinase 7 O | no | no | 0.695 | 0.762 | 0.545 | 1e-113 | |
| Q94AA4 | 489 | 6-phosphofructokinase 3 O | no | no | 0.695 | 0.756 | 0.533 | 1e-111 | |
| Q9M0F9 | 473 | 6-phosphofructokinase 1 O | no | no | 0.693 | 0.780 | 0.531 | 1e-110 | |
| Q9FKG3 | 530 | 6-phosphofructokinase 4, | no | no | 0.697 | 0.7 | 0.527 | 1e-110 | |
| Q9M076 | 462 | 6-phosphofructokinase 6 O | no | no | 0.695 | 0.800 | 0.533 | 1e-109 | |
| Q9FIK0 | 444 | 6-phosphofructokinase 2 O | no | no | 0.793 | 0.950 | 0.438 | 9e-96 | |
| Q59126 | 341 | Pyrophosphate--fructose 6 | N/A | no | 0.605 | 0.944 | 0.328 | 3e-35 | |
| P65690 | 343 | 6-phosphofructokinase OS= | yes | no | 0.610 | 0.947 | 0.321 | 1e-32 | |
| P65691 | 343 | 6-phosphofructokinase OS= | yes | no | 0.610 | 0.947 | 0.321 | 1e-32 |
| >sp|Q8VYN6|K6PF5_ARATH 6-phosphofructokinase 5, chloroplastic OS=Arabidopsis thaliana GN=PFK5 PE=1 SV=1 | Back alignment and function desciption |
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Score = 886 bits (2289), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/538 (78%), Positives = 476/538 (88%), Gaps = 7/538 (1%)
Query: 1 MEALSHTVGPTVA-PLRPKRPLRWNWNGFSSVLVQSKKN--HPSGICRSA--ADEISQS- 54
M+ALS + ++ P + +G +S++++ ++ +PS R + A EI S
Sbjct: 1 MDALSQAISSGISVPYKNNSSSLVPSHGLTSLILRKSRSPVNPSSRSRVSVRASEIQHSK 60
Query: 55 ARASGLDFNDPDWKSKFQSDFEKRFSLPHITDIFRDATPIPSTFCLRMRTPVTEDFADGY 114
AS +D +DPDWK K++ DFE+RFS+PHITD+ DA I STFCL+MR+P TEDF GY
Sbjct: 61 TSASSIDLSDPDWKLKYEKDFEQRFSIPHITDVLPDAEAIRSTFCLKMRSP-TEDFVGGY 119
Query: 115 PSDEKWHGYINNNDRVLLKVINFSSPTSAGAECIDRDCTWVEQWVHRAGPREEIYFKPEE 174
PSDE+WHGYINNNDRVLLKVI++SSPTSAGAEC+D DC+WVEQW+HRAGPRE+IYF+PEE
Sbjct: 120 PSDEEWHGYINNNDRVLLKVISYSSPTSAGAECLDHDCSWVEQWIHRAGPREKIYFRPEE 179
Query: 175 VKAAIVTCGGLCPGLNDVIRHIVITLEIYGVKNIVGIPFGYRGFCDKELTEMPLSRKVVQ 234
VKAAI+TCGGLCPGLNDVIRHIVITLEIYGVKNIVGIPFGYRGF DK+LTEMPLSRKVVQ
Sbjct: 180 VKAAIITCGGLCPGLNDVIRHIVITLEIYGVKNIVGIPFGYRGFSDKDLTEMPLSRKVVQ 239
Query: 235 NIHLSGGSLLGVSRGAPTVSEIVDSMEERGINMLFVLGGNGTHAGANAIHNECRKRRMKV 294
NIHLSGGSLLGVSRG P+VSEIVDSMEERGINMLFVLGGNGTHAGANAIHNECRKR++KV
Sbjct: 240 NIHLSGGSLLGVSRGGPSVSEIVDSMEERGINMLFVLGGNGTHAGANAIHNECRKRKIKV 299
Query: 295 AVVGVPKTIDNDILLMDKTFGFDTAVEEAQRAINSAYIEAHSAYHGIGIVKLMGRSSGYI 354
AVVGVPKTIDNDIL MDKTFGFDTAVEEAQRAINSAYIEAHSAYHGIG+VKLMGR+SG+I
Sbjct: 300 AVVGVPKTIDNDILHMDKTFGFDTAVEEAQRAINSAYIEAHSAYHGIGVVKLMGRNSGFI 359
Query: 355 AMHASLASGQIDICLIPESPFNLHGPNGVLRHLKYLIETKGSAVVCVAEGAGQSLIKKTN 414
AM ASLASGQ+DICLIPE PFNLHGPNGVL+HLKYLIETKGSAV+CVAEGAGQ+ ++KTN
Sbjct: 360 AMQASLASGQVDICLIPEVPFNLHGPNGVLKHLKYLIETKGSAVICVAEGAGQNFLEKTN 419
Query: 415 ATDASGNIVLGDVGVLIQQETKKYFKEIGVPIDVKYIDPTYMIRACRANASDGILCTVLG 474
A DASGN VLGD GV IQQETKKYFKEI PIDVKYIDPTYMIRA RANASDGILCTVLG
Sbjct: 420 AKDASGNAVLGDFGVYIQQETKKYFKEISTPIDVKYIDPTYMIRAVRANASDGILCTVLG 479
Query: 475 QNAVHGAFAGFSGITVGLCNTHYAYFPIPEVISYPRAVDPNSRMWHRCLTSTGQPDFI 532
QNAVHGAFAG+SGITVG+ NTHYAY PI EVI+YP++VDPNSRMWHRCLTSTGQPDFI
Sbjct: 480 QNAVHGAFAGYSGITVGIINTHYAYLPITEVIAYPKSVDPNSRMWHRCLTSTGQPDFI 537
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Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: .EC: 1EC: 1 |
| >sp|Q9C5J7|K6PF7_ARATH 6-phosphofructokinase 7 OS=Arabidopsis thaliana GN=PFK7 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q94AA4|K6PF3_ARATH 6-phosphofructokinase 3 OS=Arabidopsis thaliana GN=PFK3 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9M0F9|K6PF1_ARATH 6-phosphofructokinase 1 OS=Arabidopsis thaliana GN=PFK1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9FKG3|K6PF4_ARATH 6-phosphofructokinase 4, chloroplastic OS=Arabidopsis thaliana GN=PFK4 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9M076|K6PF6_ARATH 6-phosphofructokinase 6 OS=Arabidopsis thaliana GN=PFK6 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9FIK0|K6PF2_ARATH 6-phosphofructokinase 2 OS=Arabidopsis thaliana GN=PFK2 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q59126|PFP_AMYME Pyrophosphate--fructose 6-phosphate 1-phosphotransferase OS=Amycolatopsis methanolica GN=pfp PE=1 SV=2 | Back alignment and function description |
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| >sp|P65690|K6PF_MYCTU 6-phosphofructokinase OS=Mycobacterium tuberculosis GN=pfkA PE=3 SV=1 | Back alignment and function description |
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| >sp|P65691|K6PF_MYCBO 6-phosphofructokinase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=pfkA PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 532 | ||||||
| 449476484 | 532 | PREDICTED: 6-phosphofructokinase 5, chlo | 0.996 | 0.996 | 0.807 | 0.0 | |
| 449438819 | 532 | PREDICTED: 6-phosphofructokinase 5, chlo | 0.996 | 0.996 | 0.807 | 0.0 | |
| 30681728 | 537 | 6-phosphofructokinase 5 [Arabidopsis tha | 0.998 | 0.988 | 0.789 | 0.0 | |
| 224094979 | 473 | predicted protein [Populus trichocarpa] | 0.889 | 1.0 | 0.883 | 0.0 | |
| 297821473 | 537 | phosphofructokinase family protein [Arab | 0.998 | 0.988 | 0.789 | 0.0 | |
| 356523990 | 532 | PREDICTED: 6-phosphofructokinase 5, chlo | 0.904 | 0.904 | 0.856 | 0.0 | |
| 357517251 | 529 | 6-phosphofructokinase [Medicago truncatu | 0.994 | 1.0 | 0.789 | 0.0 | |
| 356567682 | 534 | PREDICTED: 6-phosphofructokinase 5, chlo | 0.889 | 0.885 | 0.868 | 0.0 | |
| 356497720 | 531 | PREDICTED: 6-phosphofructokinase 5, chlo | 0.890 | 0.892 | 0.850 | 0.0 | |
| 255579726 | 431 | phosphofructokinase, putative [Ricinus c | 0.810 | 1.0 | 0.921 | 0.0 |
| >gi|449476484|ref|XP_004154749.1| PREDICTED: 6-phosphofructokinase 5, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
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Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/534 (80%), Positives = 475/534 (88%), Gaps = 4/534 (0%)
Query: 1 MEALSHTVGPTVAPLRPKRPLRWNWNGFSS--VLVQSKKNHPSGICRSAADEISQSARAS 58
M ++SH + P +A N GF++ S + H I S ++ + +
Sbjct: 1 MGSISHAILPKLAFHHQLPHSSSNHTGFNADKFFTISSRKHSGRIFSSL--DVKDGRKNT 58
Query: 59 GLDFNDPDWKSKFQSDFEKRFSLPHITDIFRDATPIPSTFCLRMRTPVTEDFADGYPSDE 118
+DFNDPDWK K+Q+DFEKRF+LPHITD+F DA PIPSTFCL+MRTPV++ FA GYPSDE
Sbjct: 59 AIDFNDPDWKLKYQADFEKRFNLPHITDVFVDAVPIPSTFCLKMRTPVSDVFAGGYPSDE 118
Query: 119 KWHGYINNNDRVLLKVINFSSPTSAGAECIDRDCTWVEQWVHRAGPREEIYFKPEEVKAA 178
+WHGYINNNDRVLLKVIN+SSPTSAGAECID +CTWVEQWVHRAGPRE+IYFKPEEVKAA
Sbjct: 119 EWHGYINNNDRVLLKVINYSSPTSAGAECIDPNCTWVEQWVHRAGPREKIYFKPEEVKAA 178
Query: 179 IVTCGGLCPGLNDVIRHIVITLEIYGVKNIVGIPFGYRGFCDKELTEMPLSRKVVQNIHL 238
IVTCGGLCPGLNDVIR IVITLEIYGVK IVGIPFGYRGF DKELTEMPLSRKVVQNIHL
Sbjct: 179 IVTCGGLCPGLNDVIRQIVITLEIYGVKKIVGIPFGYRGFSDKELTEMPLSRKVVQNIHL 238
Query: 239 SGGSLLGVSRGAPTVSEIVDSMEERGINMLFVLGGNGTHAGANAIHNECRKRRMKVAVVG 298
SGGSLLGVSRG P++ EIVDSM+ERGI+MLFVLGGNGTHAGANAIHNECRKRR+KVAVVG
Sbjct: 239 SGGSLLGVSRGGPSIDEIVDSMQERGIDMLFVLGGNGTHAGANAIHNECRKRRLKVAVVG 298
Query: 299 VPKTIDNDILLMDKTFGFDTAVEEAQRAINSAYIEAHSAYHGIGIVKLMGRSSGYIAMHA 358
VPKTIDNDILLMDKTFGFDTAVEEAQRAINSAYIEAHSAYHG+GIVKLMGRSSG+IAMHA
Sbjct: 299 VPKTIDNDILLMDKTFGFDTAVEEAQRAINSAYIEAHSAYHGVGIVKLMGRSSGFIAMHA 358
Query: 359 SLASGQIDICLIPESPFNLHGPNGVLRHLKYLIETKGSAVVCVAEGAGQSLIKKTNATDA 418
+LASGQID+CLIPE PF LHGP+GVLRH+KYLI+TKGSAVVCVAEG GQ+L++KTNATDA
Sbjct: 359 ALASGQIDVCLIPEVPFQLHGPHGVLRHIKYLIDTKGSAVVCVAEGGGQNLLQKTNATDA 418
Query: 419 SGNIVLGDVGVLIQQETKKYFKEIGVPIDVKYIDPTYMIRACRANASDGILCTVLGQNAV 478
SGNIVL D+GV IQQE KKYFKE+ VP+DVKYIDPTYMIRACRANASDGILCTVLGQNAV
Sbjct: 419 SGNIVLSDIGVYIQQEMKKYFKELSVPVDVKYIDPTYMIRACRANASDGILCTVLGQNAV 478
Query: 479 HGAFAGFSGITVGLCNTHYAYFPIPEVISYPRAVDPNSRMWHRCLTSTGQPDFI 532
HGAFAG+SGITVG+CNTHY Y PIPEVISYPR +DPNSRMWHRCLTSTGQPDFI
Sbjct: 479 HGAFAGYSGITVGICNTHYVYLPIPEVISYPRLLDPNSRMWHRCLTSTGQPDFI 532
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Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449438819|ref|XP_004137185.1| PREDICTED: 6-phosphofructokinase 5, chloroplastic-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|30681728|ref|NP_850025.1| 6-phosphofructokinase 5 [Arabidopsis thaliana] gi|75161510|sp|Q8VYN6.1|K6PF5_ARATH RecName: Full=6-phosphofructokinase 5, chloroplastic; Short=Phosphofructokinase 5; AltName: Full=Phosphohexokinase 5; Flags: Precursor gi|17979345|gb|AAL49898.1| putative pyrophosphate-fructose-6-phosphate 1-phosphotransferase [Arabidopsis thaliana] gi|20466013|gb|AAM20228.1| putative pyrophosphate-fructose-6-phosphate 1-phosphotransferase [Arabidopsis thaliana] gi|330252218|gb|AEC07312.1| 6-phosphofructokinase 5 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|224094979|ref|XP_002310313.1| predicted protein [Populus trichocarpa] gi|222853216|gb|EEE90763.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|297821473|ref|XP_002878619.1| phosphofructokinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297324458|gb|EFH54878.1| phosphofructokinase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|356523990|ref|XP_003530616.1| PREDICTED: 6-phosphofructokinase 5, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|357517251|ref|XP_003628914.1| 6-phosphofructokinase [Medicago truncatula] gi|355522936|gb|AET03390.1| 6-phosphofructokinase [Medicago truncatula] | Back alignment and taxonomy information |
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| >gi|356567682|ref|XP_003552046.1| PREDICTED: 6-phosphofructokinase 5, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|356497720|ref|XP_003517707.1| PREDICTED: 6-phosphofructokinase 5, chloroplastic-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|255579726|ref|XP_002530702.1| phosphofructokinase, putative [Ricinus communis] gi|223529758|gb|EEF31697.1| phosphofructokinase, putative [Ricinus communis] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 532 | ||||||
| TAIR|locus:2041208 | 537 | PFK5 "phosphofructokinase 5" [ | 0.998 | 0.988 | 0.771 | 7e-228 | |
| TAIR|locus:2165046 | 485 | PFK7 "phosphofructokinase 7" [ | 0.699 | 0.767 | 0.536 | 4.2e-102 | |
| TAIR|locus:2136849 | 489 | PFK3 "phosphofructokinase 3" [ | 0.695 | 0.756 | 0.519 | 1.5e-99 | |
| TAIR|locus:2151571 | 530 | PFK4 "phosphofructokinase 4" [ | 0.699 | 0.701 | 0.518 | 2.4e-99 | |
| TAIR|locus:2118249 | 473 | PFK1 "phosphofructokinase 1" [ | 0.693 | 0.780 | 0.515 | 1.3e-98 | |
| TAIR|locus:2134108 | 462 | PFK6 "phosphofructokinase 6" [ | 0.695 | 0.800 | 0.52 | 1.3e-98 | |
| TAIR|locus:2160897 | 444 | PFK2 "phosphofructokinase 2" [ | 0.695 | 0.833 | 0.461 | 2e-86 | |
| UNIPROTKB|P65690 | 343 | pfkA "6-phosphofructokinase" [ | 0.609 | 0.944 | 0.314 | 2.1e-30 | |
| TIGR_CMR|CHY_1349 | 361 | CHY_1349 "phosphofructokinase" | 0.603 | 0.889 | 0.306 | 5.2e-28 | |
| TIGR_CMR|GSU_1703 | 363 | GSU_1703 "6-phosphofructokinas | 0.458 | 0.672 | 0.329 | 8.6e-24 |
| TAIR|locus:2041208 PFK5 "phosphofructokinase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2199 (779.1 bits), Expect = 7.0e-228, P = 7.0e-228
Identities = 415/538 (77%), Positives = 466/538 (86%)
Query: 1 MEALSHTVGPTVA-PLRPKRPLRWNWNGFSSVLVQSKKN--HPSGICRSA--ADEISQS- 54
M+ALS + ++ P + +G +S++++ ++ +PS R + A EI S
Sbjct: 1 MDALSQAISSGISVPYKNNSSSLVPSHGLTSLILRKSRSPVNPSSRSRVSVRASEIQHSK 60
Query: 55 ARASGLDFNDPDWKSKFQSDFEKRFSLPHITDIFRDATPIPSTFCLRMRTPVTEDFADGY 114
AS +D +DPDWK K++ DFE+RFS+PHITD+ DA I STFCL+MR+P TEDF GY
Sbjct: 61 TSASSIDLSDPDWKLKYEKDFEQRFSIPHITDVLPDAEAIRSTFCLKMRSP-TEDFVGGY 119
Query: 115 PSDEKWHGYINNNDRVLLKVINFSSPTSAGAECIDRDCTWVEQWVHRAGPREEIYFKPEE 174
PSDE+WHGYINNNDRVLLKVI++SSPTSAGAEC+D DC+WVEQW+HRAGPRE+IYF+PEE
Sbjct: 120 PSDEEWHGYINNNDRVLLKVISYSSPTSAGAECLDHDCSWVEQWIHRAGPREKIYFRPEE 179
Query: 175 VKAAIVTCGGLCPGLNDVIRHIVITLEIYGVKNIVGIPFGYRGFCDKELTEMPLSRKVVQ 234
VKAAI+TCGGLCPGLNDVIRHIVITLEIYGVKNIVGIPFGYRGF DK+LTEMPLSRKVVQ
Sbjct: 180 VKAAIITCGGLCPGLNDVIRHIVITLEIYGVKNIVGIPFGYRGFSDKDLTEMPLSRKVVQ 239
Query: 235 NIHXXXXXXXXXXRGAPTVSEIVDSMEERGINMLFVLGGNGTHAGANAIHNECRKRRMKV 294
NIH RG P+VSEIVDSMEERGINMLFVLGGNGTHAGANAIHNECRKR++KV
Sbjct: 240 NIHLSGGSLLGVSRGGPSVSEIVDSMEERGINMLFVLGGNGTHAGANAIHNECRKRKIKV 299
Query: 295 AVVGVPKTIDNDILLMDKTFGFDTAVEEAQRAINSAYIEAHSAYHGIGIVKLMGRSSGYI 354
AVVGVPKTIDNDIL MDKTFGFDTAVEEAQRAINSAYIEAHSAYHGIG+VKLMGR+SG+I
Sbjct: 300 AVVGVPKTIDNDILHMDKTFGFDTAVEEAQRAINSAYIEAHSAYHGIGVVKLMGRNSGFI 359
Query: 355 AMHASLASGQIDICLIPESPFNLHGPNGVLRHLKYLIETKGSAVVCVAEGAGQSLIKKTN 414
AM ASLASGQ+DICLIPE PFNLHGPNGVL+HLKYLIETKGSAV+CVAEGAGQ+ ++KTN
Sbjct: 360 AMQASLASGQVDICLIPEVPFNLHGPNGVLKHLKYLIETKGSAVICVAEGAGQNFLEKTN 419
Query: 415 ATDASGNIVLGDVGVLIQQETKKYFKEIGVPIDVKYIDPTYMIRACRANASDGILCTVLG 474
A DASGN VLGD GV IQQETKKYFKEI PIDVKYIDPTYMIRA RANASDGILCTVLG
Sbjct: 420 AKDASGNAVLGDFGVYIQQETKKYFKEISTPIDVKYIDPTYMIRAVRANASDGILCTVLG 479
Query: 475 QNAVHGAFAGFSGITVGLCNTHYAYFPIPEVISYPRAVDPNSRMWHRCLTSTGQPDFI 532
QNAVHGAFAG+SGITVG+ NTHYAY PI EVI+YP++VDPNSRMWHRCLTSTGQPDFI
Sbjct: 480 QNAVHGAFAGYSGITVGIINTHYAYLPITEVIAYPKSVDPNSRMWHRCLTSTGQPDFI 537
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| TAIR|locus:2165046 PFK7 "phosphofructokinase 7" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2136849 PFK3 "phosphofructokinase 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2151571 PFK4 "phosphofructokinase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2118249 PFK1 "phosphofructokinase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2134108 PFK6 "phosphofructokinase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2160897 PFK2 "phosphofructokinase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P65690 pfkA "6-phosphofructokinase" [Mycobacterium tuberculosis (taxid:1773)] | Back alignment and assigned GO terms |
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| TIGR_CMR|CHY_1349 CHY_1349 "phosphofructokinase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
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| TIGR_CMR|GSU_1703 GSU_1703 "6-phosphofructokinase" [Geobacter sulfurreducens PCA (taxid:243231)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8VYN6 | K6PF5_ARATH | 2, ., 7, ., 1, ., 1, 1 | 0.7899 | 0.9981 | 0.9888 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.7.1.11 | 0.979 |
| 3rd Layer | 2.7.1 | 0.983 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 532 | |||
| PLN02884 | 411 | PLN02884, PLN02884, 6-phosphofructokinase | 0.0 | |
| PRK06830 | 443 | PRK06830, PRK06830, diphosphate--fructose-6-phosph | 0.0 | |
| PTZ00286 | 459 | PTZ00286, PTZ00286, 6-phospho-1-fructokinase; Prov | 1e-177 | |
| PLN02564 | 484 | PLN02564, PLN02564, 6-phosphofructokinase | 1e-176 | |
| COG0205 | 347 | COG0205, PfkA, 6-phosphofructokinase [Carbohydrate | 5e-69 | |
| TIGR02483 | 324 | TIGR02483, PFK_mixed, phosphofructokinase | 1e-51 | |
| PRK03202 | 320 | PRK03202, PRK03202, 6-phosphofructokinase; Provisi | 2e-51 | |
| cd00363 | 338 | cd00363, PFK, Phosphofructokinase, a key regulator | 4e-39 | |
| TIGR02482 | 301 | TIGR02482, PFKA_ATP, 6-phosphofructokinase | 6e-39 | |
| cd00763 | 317 | cd00763, Bacterial_PFK, Phosphofructokinase, a key | 8e-35 | |
| PRK14071 | 360 | PRK14071, PRK14071, 6-phosphofructokinase; Provisi | 4e-32 | |
| pfam00365 | 279 | pfam00365, PFK, Phosphofructokinase | 1e-31 | |
| PRK14072 | 416 | PRK14072, PRK14072, 6-phosphofructokinase; Provisi | 2e-23 | |
| TIGR02478 | 746 | TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukar | 9e-17 | |
| TIGR02478 | 746 | TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukar | 1e-15 | |
| cd00764 | 762 | cd00764, Eukaryotic_PFK, Phosphofructokinase, a ke | 2e-15 | |
| cd00764 | 762 | cd00764, Eukaryotic_PFK, Phosphofructokinase, a ke | 3e-14 | |
| PRK06555 | 403 | PRK06555, PRK06555, pyrophosphate--fructose-6-phos | 1e-13 | |
| cd00765 | 550 | cd00765, Pyrophosphate_PFK, Phosphofructokinase, a | 2e-13 | |
| TIGR02477 | 539 | TIGR02477, PFKA_PPi, diphosphate--fructose-6-phosp | 3e-13 | |
| PRK07085 | 555 | PRK07085, PRK07085, diphosphate--fructose-6-phosph | 9e-13 | |
| PTZ00287 | 1419 | PTZ00287, PTZ00287, 6-phosphofructokinase; Provisi | 1e-12 | |
| PLN02251 | 568 | PLN02251, PLN02251, pyrophosphate-dependent phosph | 5e-09 | |
| PTZ00468 | 1328 | PTZ00468, PTZ00468, phosphofructokinase family pro | 2e-08 | |
| PLN03028 | 610 | PLN03028, PLN03028, pyrophosphate--fructose-6-phos | 5e-07 |
| >gnl|CDD|178472 PLN02884, PLN02884, 6-phosphofructokinase | Back alignment and domain information |
|---|
Score = 880 bits (2276), Expect = 0.0
Identities = 361/411 (87%), Positives = 387/411 (94%)
Query: 122 GYINNNDRVLLKVINFSSPTSAGAECIDRDCTWVEQWVHRAGPREEIYFKPEEVKAAIVT 181
GY+NN+DRVLLKVI +SSPTSAGAECID DC+WVEQWVHRAGPR++IYF+PEEVKAAIVT
Sbjct: 1 GYVNNDDRVLLKVIKYSSPTSAGAECIDPDCSWVEQWVHRAGPRKKIYFEPEEVKAAIVT 60
Query: 182 CGGLCPGLNDVIRHIVITLEIYGVKNIVGIPFGYRGFCDKELTEMPLSRKVVQNIHLSGG 241
CGGLCPGLNDVIR IV TLEIYGVKNIVGIPFGYRGF +K L+EMPLSRKVVQNIHLSGG
Sbjct: 61 CGGLCPGLNDVIRQIVFTLEIYGVKNIVGIPFGYRGFFEKGLSEMPLSRKVVQNIHLSGG 120
Query: 242 SLLGVSRGAPTVSEIVDSMEERGINMLFVLGGNGTHAGANAIHNECRKRRMKVAVVGVPK 301
SLLGVSRG S+IVDS+E RGINMLFVLGGNGTHAGANAIHNECRKR+MKV+VVGVPK
Sbjct: 121 SLLGVSRGGAKTSDIVDSIEARGINMLFVLGGNGTHAGANAIHNECRKRKMKVSVVGVPK 180
Query: 302 TIDNDILLMDKTFGFDTAVEEAQRAINSAYIEAHSAYHGIGIVKLMGRSSGYIAMHASLA 361
TIDNDILLMDKTFGFDTAVEEAQRAINSAYIEAHSAYHGIG+VKLMGRSSG+IAMHASLA
Sbjct: 181 TIDNDILLMDKTFGFDTAVEEAQRAINSAYIEAHSAYHGIGLVKLMGRSSGFIAMHASLA 240
Query: 362 SGQIDICLIPESPFNLHGPNGVLRHLKYLIETKGSAVVCVAEGAGQSLIKKTNATDASGN 421
SGQ+DICLIPE PF L GPNGVLRHL++LIETKGSAVVCVAEGAGQ L++KTNATDASGN
Sbjct: 241 SGQVDICLIPEVPFTLDGPNGVLRHLEHLIETKGSAVVCVAEGAGQDLLQKTNATDASGN 300
Query: 422 IVLGDVGVLIQQETKKYFKEIGVPIDVKYIDPTYMIRACRANASDGILCTVLGQNAVHGA 481
VLGD+GV +QQE KK+FK+IGVP DVKYIDPTYMIRACRANASD ILCTVLGQNAVHGA
Sbjct: 301 PVLGDIGVHLQQEIKKHFKDIGVPADVKYIDPTYMIRACRANASDAILCTVLGQNAVHGA 360
Query: 482 FAGFSGITVGLCNTHYAYFPIPEVISYPRAVDPNSRMWHRCLTSTGQPDFI 532
FAGFSGITVG+CNTHY Y PIPEVI+YPR VDPNSRMWHRCLTSTGQPDF
Sbjct: 361 FAGFSGITVGICNTHYVYLPIPEVIAYPRRVDPNSRMWHRCLTSTGQPDFH 411
|
Length = 411 |
| >gnl|CDD|235869 PRK06830, PRK06830, diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|185539 PTZ00286, PTZ00286, 6-phospho-1-fructokinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|178178 PLN02564, PLN02564, 6-phosphofructokinase | Back alignment and domain information |
|---|
| >gnl|CDD|223283 COG0205, PfkA, 6-phosphofructokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >gnl|CDD|233887 TIGR02483, PFK_mixed, phosphofructokinase | Back alignment and domain information |
|---|
| >gnl|CDD|235111 PRK03202, PRK03202, 6-phosphofructokinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238216 cd00363, PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate | Back alignment and domain information |
|---|
| >gnl|CDD|213713 TIGR02482, PFKA_ATP, 6-phosphofructokinase | Back alignment and domain information |
|---|
| >gnl|CDD|238388 cd00763, Bacterial_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate | Back alignment and domain information |
|---|
| >gnl|CDD|184487 PRK14071, PRK14071, 6-phosphofructokinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|109425 pfam00365, PFK, Phosphofructokinase | Back alignment and domain information |
|---|
| >gnl|CDD|237600 PRK14072, PRK14072, 6-phosphofructokinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|233884 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukaryotic type | Back alignment and domain information |
|---|
| >gnl|CDD|233884 TIGR02478, 6PF1K_euk, 6-phosphofructokinase, eukaryotic type | Back alignment and domain information |
|---|
| >gnl|CDD|238389 cd00764, Eukaryotic_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate | Back alignment and domain information |
|---|
| >gnl|CDD|238389 cd00764, Eukaryotic_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate | Back alignment and domain information |
|---|
| >gnl|CDD|180620 PRK06555, PRK06555, pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|238390 cd00765, Pyrophosphate_PFK, Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate | Back alignment and domain information |
|---|
| >gnl|CDD|131530 TIGR02477, PFKA_PPi, diphosphate--fructose-6-phosphate 1-phosphotransferase | Back alignment and domain information |
|---|
| >gnl|CDD|235930 PRK07085, PRK07085, diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|240345 PTZ00287, PTZ00287, 6-phosphofructokinase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215140 PLN02251, PLN02251, pyrophosphate-dependent phosphofructokinase | Back alignment and domain information |
|---|
| >gnl|CDD|185647 PTZ00468, PTZ00468, phosphofructokinase family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215543 PLN03028, PLN03028, pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 532 | |||
| PLN02564 | 484 | 6-phosphofructokinase | 100.0 | |
| PLN02884 | 411 | 6-phosphofructokinase | 100.0 | |
| PRK06830 | 443 | diphosphate--fructose-6-phosphate 1-phosphotransfe | 100.0 | |
| PTZ00286 | 459 | 6-phospho-1-fructokinase; Provisional | 100.0 | |
| PRK06555 | 403 | pyrophosphate--fructose-6-phosphate 1-phosphotrans | 100.0 | |
| PRK14071 | 360 | 6-phosphofructokinase; Provisional | 100.0 | |
| cd00363 | 338 | PFK Phosphofructokinase, a key regulatory enzyme i | 100.0 | |
| PRK14072 | 416 | 6-phosphofructokinase; Provisional | 100.0 | |
| TIGR02483 | 324 | PFK_mixed phosphofructokinase. Members of this fam | 100.0 | |
| cd00763 | 317 | Bacterial_PFK Phosphofructokinase, a key regulator | 100.0 | |
| TIGR02482 | 301 | PFKA_ATP 6-phosphofructokinase. 6-phosphofructokin | 100.0 | |
| PRK03202 | 320 | 6-phosphofructokinase; Provisional | 100.0 | |
| COG0205 | 347 | PfkA 6-phosphofructokinase [Carbohydrate transport | 100.0 | |
| TIGR02477 | 539 | PFKA_PPi diphosphate--fructose-6-phosphate 1-phosp | 100.0 | |
| TIGR02478 | 745 | 6PF1K_euk 6-phosphofructokinase, eukaryotic type. | 100.0 | |
| TIGR02478 | 745 | 6PF1K_euk 6-phosphofructokinase, eukaryotic type. | 100.0 | |
| cd00764 | 762 | Eukaryotic_PFK Phosphofructokinase, a key regulato | 100.0 | |
| PRK07085 | 555 | diphosphate--fructose-6-phosphate 1-phosphotransfe | 100.0 | |
| PLN03028 | 610 | pyrophosphate--fructose-6-phosphate 1-phosphotrans | 100.0 | |
| cd00765 | 550 | Pyrophosphate_PFK Phosphofructokinase, a key regul | 100.0 | |
| PLN02251 | 568 | pyrophosphate-dependent phosphofructokinase | 100.0 | |
| PF00365 | 282 | PFK: Phosphofructokinase; InterPro: IPR000023 The | 100.0 | |
| cd00764 | 762 | Eukaryotic_PFK Phosphofructokinase, a key regulato | 100.0 | |
| PTZ00468 | 1328 | phosphofructokinase family protein; Provisional | 100.0 | |
| PTZ00287 | 1419 | 6-phosphofructokinase; Provisional | 100.0 | |
| PTZ00287 | 1419 | 6-phosphofructokinase; Provisional | 100.0 | |
| PTZ00468 | 1328 | phosphofructokinase family protein; Provisional | 100.0 | |
| KOG2440 | 666 | consensus Pyrophosphate-dependent phosphofructo-1- | 100.0 | |
| KOG2440 | 666 | consensus Pyrophosphate-dependent phosphofructo-1- | 100.0 | |
| PRK04761 | 246 | ppnK inorganic polyphosphate/ATP-NAD kinase; Revie | 93.32 | |
| cd01537 | 264 | PBP1_Repressors_Sugar_Binding_like Ligand-binding | 93.2 | |
| cd06320 | 275 | PBP1_allose_binding Periplasmic allose-binding dom | 93.16 | |
| PRK14077 | 287 | pnk inorganic polyphosphate/ATP-NAD kinase; Provis | 93.08 | |
| PF00532 | 279 | Peripla_BP_1: Periplasmic binding proteins and sug | 93.0 | |
| PLN02929 | 301 | NADH kinase | 92.81 | |
| PRK04885 | 265 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 92.7 | |
| PRK00561 | 259 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 91.68 | |
| TIGR01917 | 431 | gly_red_sel_B glycine reductase, selenoprotein B. | 91.61 | |
| PRK03501 | 264 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 91.57 | |
| COG3199 | 355 | Predicted inorganic polyphosphate/ATP-NAD kinase [ | 91.37 | |
| PF01513 | 285 | NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Me | 91.23 | |
| PRK14075 | 256 | pnk inorganic polyphosphate/ATP-NAD kinase; Provis | 91.15 | |
| PRK01911 | 292 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 90.49 | |
| TIGR01918 | 431 | various_sel_PB selenoprotein B, glycine/betaine/sa | 90.45 | |
| PRK04539 | 296 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 89.97 | |
| PRK03372 | 306 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 89.95 | |
| PRK02649 | 305 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 89.69 | |
| PRK10014 | 342 | DNA-binding transcriptional repressor MalI; Provis | 89.63 | |
| cd06281 | 269 | PBP1_LacI_like_5 Ligand-binding domain of uncharac | 89.52 | |
| PRK10703 | 341 | DNA-binding transcriptional repressor PurR; Provis | 89.38 | |
| cd06321 | 271 | PBP1_ABC_sugar_binding_like_11 Periplasmic sugar-b | 88.71 | |
| PRK03378 | 292 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 88.49 | |
| PRK13054 | 300 | lipid kinase; Reviewed | 88.45 | |
| PRK02231 | 272 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 88.19 | |
| PLN02935 | 508 | Bifunctional NADH kinase/NAD(+) kinase | 87.79 | |
| PRK13337 | 304 | putative lipid kinase; Reviewed | 87.71 | |
| cd01538 | 288 | PBP1_ABC_xylose_binding Periplasmic xylose-binding | 87.34 | |
| PRK11914 | 306 | diacylglycerol kinase; Reviewed | 87.29 | |
| PRK01231 | 295 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 86.45 | |
| cd06297 | 269 | PBP1_LacI_like_12 Ligand-binding domain of unchara | 85.64 | |
| PRK13055 | 334 | putative lipid kinase; Reviewed | 85.42 | |
| cd06317 | 275 | PBP1_ABC_sugar_binding_like_8 Periplasmic sugar-bi | 84.38 | |
| PRK02155 | 291 | ppnK NAD(+)/NADH kinase family protein; Provisiona | 84.36 | |
| cd06299 | 265 | PBP1_LacI_like_13 Ligand-binding domain of DNA-bin | 83.7 | |
| PRK03708 | 277 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 83.69 | |
| PRK02645 | 305 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 83.52 | |
| TIGR00288 | 160 | conserved hypothetical protein TIGR00288. This fam | 83.37 | |
| TIGR03702 | 293 | lip_kinase_YegS lipid kinase YegS. Members of this | 83.1 | |
| cd08189 | 374 | Fe-ADH5 Iron-containing alcohol dehydrogenases-lik | 83.01 | |
| PRK14076 | 569 | pnk inorganic polyphosphate/ATP-NAD kinase; Provis | 82.97 | |
| PLN02727 | 986 | NAD kinase | 82.74 | |
| PRK15408 | 336 | autoinducer 2-binding protein lsrB; Provisional | 82.69 | |
| PRK13059 | 295 | putative lipid kinase; Reviewed | 82.55 | |
| COG1609 | 333 | PurR Transcriptional regulators [Transcription] | 81.44 | |
| cd06305 | 273 | PBP1_methylthioribose_binding_like Methylthioribos | 81.13 | |
| PRK09860 | 383 | putative alcohol dehydrogenase; Provisional | 80.84 | |
| PRK01185 | 271 | ppnK inorganic polyphosphate/ATP-NAD kinase; Provi | 80.81 | |
| PRK00861 | 300 | putative lipid kinase; Reviewed | 80.8 | |
| TIGR02638 | 379 | lactal_redase lactaldehyde reductase. This clade o | 80.39 | |
| COG0061 | 281 | nadF NAD kinase [Coenzyme metabolism] | 80.06 |
| >PLN02564 6-phosphofructokinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-124 Score=998.54 Aligned_cols=429 Identities=51% Similarity=0.869 Sum_probs=402.4
Q ss_pred ccccCCcccccCCCCCCCCCcccccCCCCcccCCCCCCCCCcccCCcccCCCeeeeeeeccCCCCCCCCcccccccchhh
Q 009559 77 KRFSLPHITDIFRDATPIPSTFCLRMRTPVTEDFADGYPSDEKWHGYINNNDRVLLKVINFSSPTSAGAECIDRDCTWVE 156 (532)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (532)
..-+||||+||+|+++++|| |+..| |.|+.+. ++||+++|+|++++...... . ..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~--------p~~~~--~~~~~~~--~~~v~~~~~v~~~~~~~~~~-~------------~~ 69 (484)
T PLN02564 15 VLEDVPHLTDYLPDLPTYPN--------PLQDN--PAYSVVK--QYFVNEDDTVAQKIVVHKDS-P------------RG 69 (484)
T ss_pred eeccCcchhhcCCCcCCCCC--------ccCCC--ccccccc--ceEeCCCCeEEEeecccccc-c------------CC
Confidence 34589999999999999998 66666 6788666 78999999999988764211 0 13
Q ss_pred hhhhhcCCCcccccCCCCcEEEEEeCCCCcchHHHHHHHHHHHHH-HcCCceEEEEcccccccccCCceeecCCHHHHhh
Q 009559 157 QWVHRAGPREEIYFKPEEVKAAIVTCGGLCPGLNDVIRHIVITLE-IYGVKNIVGIPFGYRGFCDKELTEMPLSRKVVQN 235 (532)
Q Consensus 157 ~~~~~agpr~~i~f~p~~~kiaIvt~GG~cPGlNavIr~iv~~l~-~ygv~~V~Gi~~Gy~GL~~~~~~~i~Lt~~~V~~ 235 (532)
.+|+|||||++|||+|+++|||||||||+|||||+|||++|+.+. .||+.+||||++||+||+++++ ++|+++.|++
T Consensus 70 ~~~~~agpr~~i~f~p~~~riaIlTsGGd~PGmNavIRavv~~l~~~yg~~~V~Gi~~Gy~GL~~~~~--i~Lt~~~V~~ 147 (484)
T PLN02564 70 THFRRAGPRQKVYFESDEVRACIVTCGGLCPGLNTVIREIVCGLSYMYGVTRILGIDGGYRGFYSRNT--IPLTPKVVND 147 (484)
T ss_pred ccceecCCcceEEEcCcceEEEEECCCCCCccHhHHHHHHHHHHHHhCCCeEEEEEccChHHhCCCCe--EeCCHHHhhc
Confidence 589999999999999999999999999999999999999999885 6787789999999999999876 6799999999
Q ss_pred hhhcCCcceecccCCccHHHHHHHHHHhCCcEEEEeCChhhHHHHHHHHHHHHhcCCCceEeeeecccccCCCCCCccCC
Q 009559 236 IHLSGGSLLGVSRGAPTVSEIVDSMEERGINMLFVLGGNGTHAGANAIHNECRKRRMKVAVVGVPKTIDNDILLMDKTFG 315 (532)
Q Consensus 236 i~~~GGSiLGTSR~~~~~~~ivd~L~~~gId~L~vIGGdGT~~gA~~L~ee~~kr~~~I~VIGIPKTIDNDI~~tD~SfG 315 (532)
|+++|||+|||||++++.++|+++|++++||+||+|||||||++|++|++++++++++|+||||||||||||++||+|||
T Consensus 148 i~~~GGTiLGTsR~~~~~~~iv~~L~~~~Id~LivIGGDGS~~gA~~L~e~~~~~g~~i~VIGIPKTIDNDI~~tD~T~G 227 (484)
T PLN02564 148 IHKRGGTILGTSRGGHDTSKIVDSIQDRGINQVYIIGGDGTQKGASVIYEEIRRRGLKVAVAGIPKTIDNDIPVIDKSFG 227 (484)
T ss_pred HhhCCCceeccCCCcchHHHHHHHHHHhCCCEEEEECCchHHHHHHHHHHHHHHcCCCceEEEecccccCCCcCcccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHhhhhccccEEEEEecCCCccHHHHHHhHhcCCccEEEcCCCCCCCCChhHHHHHHHHHHhccC
Q 009559 316 FDTAVEEAQRAINSAYIEAHSAYHGIGIVKLMGRSSGYIAMHASLASGQIDICLIPESPFNLHGPNGVLRHLKYLIETKG 395 (532)
Q Consensus 316 FdTAv~~a~~aI~~a~~eA~S~~~~V~vVevMGR~sG~LA~~aaLAsg~ad~~LIPE~pf~leg~~~ll~~lk~~~~~kg 395 (532)
||||+++++++|++++.||.|++|||+|||+|||+|||||++++||++.||+|||||+||+++++.+|+++|++++++++
T Consensus 228 FdTAv~~~~~aI~~i~~tA~S~~~rv~iVEvMGR~aG~LAl~aaLA~~gad~iLIPE~pf~le~~~~ll~~i~~rl~~~~ 307 (484)
T PLN02564 228 FDTAVEEAQRAINAAHVEAESVENGIGLVKLMGRYSGFIAMYATLASRDVDCCLIPESPFYLEGKGGLFEFIEKRLKENG 307 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCCHHHHHHHHHHhhCCCCEEEeCCCCCCcchHHHHHHHHHHHHhccC
Confidence 99999999999999999999988899999999999999999999999559999999999999999999999999999999
Q ss_pred ceEEEeeccccchhhccc----ccccCCCCccccchHHHHHHHHHHHH-HhcCcceeEEEeCCCceeccCCCCchhHHHH
Q 009559 396 SAVVCVAEGAGQSLIKKT----NATDASGNIVLGDVGVLIQQETKKYF-KEIGVPIDVKYIDPTYMIRACRANASDGILC 470 (532)
Q Consensus 396 ~~VVVVAEGag~~l~~~~----~~~DasGn~~l~dIg~~L~~~I~~~f-~~~g~~~~vk~idpgy~iRs~~p~a~D~i~c 470 (532)
|+|||||||++|+++.+. ..+|++||++|+++|.+|+++|+++| ++.++.+++||++|||+|||++|+++|++||
T Consensus 308 ~~VIVVAEGagq~~~~~~~~~~~~~Da~Gn~~l~dig~~La~~I~~~~~~~~~~~~~~r~i~lgy~qRgg~p~a~Dri~a 387 (484)
T PLN02564 308 HMVIVVAEGAGQDLIAESMESSDLQDASGNKLLLDVGLWLSQKIKDHFTKVKKMPINLKYIDPTYMIRAIPSNASDNVYC 387 (484)
T ss_pred CEEEEEeCCCccchhhhhhcccccccccCCcccCcHHHHHHHHHHHHhhhcccCCceEEEecCCchhcCCCCcHHHHHHH
Confidence 999999999999877543 46899999999999999999999999 5667788999999999999999999999999
Q ss_pred HHhhHHHHHhHhcCCccEEEEEECCeeEEechhhHhcCCCcCCCCcHHHHHHHHhcCCCCCC
Q 009559 471 TVLGQNAVHGAFAGFSGITVGLCNTHYAYFPIPEVISYPRAVDPNSRMWHRCLTSTGQPDFI 532 (532)
Q Consensus 471 ~~LG~~AV~~a~aG~Tg~mVgi~n~~~~~vPi~ev~~~~k~vd~~~~~w~~~l~~tgQp~f~ 532 (532)
++||++|||++|+|+||+|||++|++++++||++++..+|+||+++++|+++|++||||+|+
T Consensus 388 ~~lG~~AV~~~~aG~tg~mVg~~~~~~~~vPi~~~~~~~~~v~~~~~~w~~~l~~t~qp~f~ 449 (484)
T PLN02564 388 TLLAHSAVHGAMAGYTGFTVGPVNGRHAYIPFYRITEKQNKVVITDRMWARLLSSTNQPSFL 449 (484)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEECCEEEEEEHHHHhccCCccCCChHHHHHHHHHcCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999984
|
|
| >PLN02884 6-phosphofructokinase | Back alignment and domain information |
|---|
| >PRK06830 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional | Back alignment and domain information |
|---|
| >PTZ00286 6-phospho-1-fructokinase; Provisional | Back alignment and domain information |
|---|
| >PRK06555 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Validated | Back alignment and domain information |
|---|
| >PRK14071 6-phosphofructokinase; Provisional | Back alignment and domain information |
|---|
| >cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate | Back alignment and domain information |
|---|
| >PRK14072 6-phosphofructokinase; Provisional | Back alignment and domain information |
|---|
| >TIGR02483 PFK_mixed phosphofructokinase | Back alignment and domain information |
|---|
| >cd00763 Bacterial_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate | Back alignment and domain information |
|---|
| >TIGR02482 PFKA_ATP 6-phosphofructokinase | Back alignment and domain information |
|---|
| >PRK03202 6-phosphofructokinase; Provisional | Back alignment and domain information |
|---|
| >COG0205 PfkA 6-phosphofructokinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >TIGR02477 PFKA_PPi diphosphate--fructose-6-phosphate 1-phosphotransferase | Back alignment and domain information |
|---|
| >TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type | Back alignment and domain information |
|---|
| >TIGR02478 6PF1K_euk 6-phosphofructokinase, eukaryotic type | Back alignment and domain information |
|---|
| >cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate | Back alignment and domain information |
|---|
| >PRK07085 diphosphate--fructose-6-phosphate 1-phosphotransferase; Provisional | Back alignment and domain information |
|---|
| >PLN03028 pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Provisional | Back alignment and domain information |
|---|
| >cd00765 Pyrophosphate_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate | Back alignment and domain information |
|---|
| >PLN02251 pyrophosphate-dependent phosphofructokinase | Back alignment and domain information |
|---|
| >PF00365 PFK: Phosphofructokinase; InterPro: IPR000023 The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes [] | Back alignment and domain information |
|---|
| >cd00764 Eukaryotic_PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate | Back alignment and domain information |
|---|
| >PTZ00468 phosphofructokinase family protein; Provisional | Back alignment and domain information |
|---|
| >PTZ00287 6-phosphofructokinase; Provisional | Back alignment and domain information |
|---|
| >PTZ00287 6-phosphofructokinase; Provisional | Back alignment and domain information |
|---|
| >PTZ00468 phosphofructokinase family protein; Provisional | Back alignment and domain information |
|---|
| >KOG2440 consensus Pyrophosphate-dependent phosphofructo-1-kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >KOG2440 consensus Pyrophosphate-dependent phosphofructo-1-kinase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
| >PRK04761 ppnK inorganic polyphosphate/ATP-NAD kinase; Reviewed | Back alignment and domain information |
|---|
| >cd01537 PBP1_Repressors_Sugar_Binding_like Ligand-binding domain of the LacI-GalR family of transcription regulators and the sugar-binding domain of ABC-type transport systems | Back alignment and domain information |
|---|
| >cd06320 PBP1_allose_binding Periplasmic allose-binding domain of bacterial transport systems that function as a primary receptor of active transport and chemotaxis | Back alignment and domain information |
|---|
| >PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
| >PF00532 Peripla_BP_1: Periplasmic binding proteins and sugar binding domain of LacI family; InterPro: IPR001761 This family includes the periplasmic binding proteins, and the LacI family transcriptional regulators | Back alignment and domain information |
|---|
| >PLN02929 NADH kinase | Back alignment and domain information |
|---|
| >PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
| >PRK00561 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B | Back alignment and domain information |
|---|
| >PRK03501 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
| >COG3199 Predicted inorganic polyphosphate/ATP-NAD kinase [General function prediction only] | Back alignment and domain information |
|---|
| >PF01513 NAD_kinase: ATP-NAD kinase; InterPro: IPR002504 Members of this family are ATP-NAD kinases 2 | Back alignment and domain information |
|---|
| >PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
| >PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family | Back alignment and domain information |
|---|
| >PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
| >PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
| >PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
| >PRK10014 DNA-binding transcriptional repressor MalI; Provisional | Back alignment and domain information |
|---|
| >cd06281 PBP1_LacI_like_5 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors | Back alignment and domain information |
|---|
| >PRK10703 DNA-binding transcriptional repressor PurR; Provisional | Back alignment and domain information |
|---|
| >cd06321 PBP1_ABC_sugar_binding_like_11 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems | Back alignment and domain information |
|---|
| >PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
| >PRK13054 lipid kinase; Reviewed | Back alignment and domain information |
|---|
| >PRK02231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
| >PLN02935 Bifunctional NADH kinase/NAD(+) kinase | Back alignment and domain information |
|---|
| >PRK13337 putative lipid kinase; Reviewed | Back alignment and domain information |
|---|
| >cd01538 PBP1_ABC_xylose_binding Periplasmic xylose-binding component of the ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily | Back alignment and domain information |
|---|
| >PRK11914 diacylglycerol kinase; Reviewed | Back alignment and domain information |
|---|
| >PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
| >cd06297 PBP1_LacI_like_12 Ligand-binding domain of uncharacterized transcription regulators from Thermus thermophilus and close homologs | Back alignment and domain information |
|---|
| >PRK13055 putative lipid kinase; Reviewed | Back alignment and domain information |
|---|
| >cd06317 PBP1_ABC_sugar_binding_like_8 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems | Back alignment and domain information |
|---|
| >PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional | Back alignment and domain information |
|---|
| >cd06299 PBP1_LacI_like_13 Ligand-binding domain of DNA-binding regulatory protein from Corynebacterium glutamicum which has a unique ability to produce significant amounts of L-glutamate directly from cheap sugar and ammonia | Back alignment and domain information |
|---|
| >PRK03708 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
| >PRK02645 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
| >TIGR00288 conserved hypothetical protein TIGR00288 | Back alignment and domain information |
|---|
| >TIGR03702 lip_kinase_YegS lipid kinase YegS | Back alignment and domain information |
|---|
| >cd08189 Fe-ADH5 Iron-containing alcohol dehydrogenases-like | Back alignment and domain information |
|---|
| >PRK14076 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
| >PLN02727 NAD kinase | Back alignment and domain information |
|---|
| >PRK15408 autoinducer 2-binding protein lsrB; Provisional | Back alignment and domain information |
|---|
| >PRK13059 putative lipid kinase; Reviewed | Back alignment and domain information |
|---|
| >COG1609 PurR Transcriptional regulators [Transcription] | Back alignment and domain information |
|---|
| >cd06305 PBP1_methylthioribose_binding_like Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily | Back alignment and domain information |
|---|
| >PRK09860 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
| >PRK01185 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional | Back alignment and domain information |
|---|
| >PRK00861 putative lipid kinase; Reviewed | Back alignment and domain information |
|---|
| >TIGR02638 lactal_redase lactaldehyde reductase | Back alignment and domain information |
|---|
| >COG0061 nadF NAD kinase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 532 | ||||
| 2hig_A | 487 | Crystal Structure Of Phosphofructokinase Apoenzyme | 2e-75 | ||
| 1zxx_A | 319 | The Crystal Structure Of Phosphofructokinase From L | 1e-20 | ||
| 1mto_A | 319 | Crystal Structure Of A Phosphofructokinase Mutant F | 2e-19 | ||
| 3pfk_A | 319 | Phosphofructokinase. Structure And Control Length = | 6e-19 | ||
| 6pfk_A | 319 | Phosphofructokinase, Inhibited T-State Length = 319 | 7e-19 | ||
| 4a3s_A | 319 | Crystal Structure Of Pfk From Bacillus Subtilis Len | 7e-19 | ||
| 1pfk_A | 320 | Crystal Structure Of The Complex Of Phosphofructoki | 6e-16 | ||
| 3opy_A | 989 | Crystal Structure Of Pichia Pastoris Phosphofructok | 1e-11 | ||
| 3o8l_A | 762 | Structure Of Phosphofructokinase From Rabbit Skelet | 1e-11 | ||
| 3o8o_B | 766 | Structure Of Phosphofructokinase From Saccharomyces | 3e-11 | ||
| 3o8o_A | 787 | Structure Of Phosphofructokinase From Saccharomyces | 3e-11 | ||
| 3opy_B | 941 | Crystal Structure Of Pichia Pastoris Phosphofructok | 9e-11 | ||
| 3opy_B | 941 | Crystal Structure Of Pichia Pastoris Phosphofructok | 5e-05 | ||
| 3k2q_A | 420 | Crystal Structure Of Pyrophosphate-Dependent Phosph | 3e-10 | ||
| 1kzh_A | 555 | Structure Of A Pyrophosphate-dependent Phosphofruct | 3e-09 | ||
| 3hno_A | 419 | Crystal Structure Of Pyrophosphate-Dependent Phosph | 1e-05 |
| >pdb|2HIG|A Chain A, Crystal Structure Of Phosphofructokinase Apoenzyme From Trypanosoma Brucei. Length = 487 | Back alignment and structure |
|
| >pdb|1ZXX|A Chain A, The Crystal Structure Of Phosphofructokinase From Lactobacillus Delbrueckii Length = 319 | Back alignment and structure |
| >pdb|1MTO|A Chain A, Crystal Structure Of A Phosphofructokinase Mutant From Bacillus Stearothermophilus Bound With Fructose-6-Phosphate Length = 319 | Back alignment and structure |
| >pdb|3PFK|A Chain A, Phosphofructokinase. Structure And Control Length = 319 | Back alignment and structure |
| >pdb|6PFK|A Chain A, Phosphofructokinase, Inhibited T-State Length = 319 | Back alignment and structure |
| >pdb|4A3S|A Chain A, Crystal Structure Of Pfk From Bacillus Subtilis Length = 319 | Back alignment and structure |
| >pdb|1PFK|A Chain A, Crystal Structure Of The Complex Of Phosphofructokinase From Escherichia Coli With Its Reaction Products Length = 320 | Back alignment and structure |
| >pdb|3OPY|A Chain A, Crystal Structure Of Pichia Pastoris Phosphofructokinase In The T- State Length = 989 | Back alignment and structure |
| >pdb|3O8L|A Chain A, Structure Of Phosphofructokinase From Rabbit Skeletal Muscle Length = 762 | Back alignment and structure |
| >pdb|3O8O|B Chain B, Structure Of Phosphofructokinase From Saccharomyces Cerevisiae Length = 766 | Back alignment and structure |
| >pdb|3O8O|A Chain A, Structure Of Phosphofructokinase From Saccharomyces Cerevisiae Length = 787 | Back alignment and structure |
| >pdb|3OPY|B Chain B, Crystal Structure Of Pichia Pastoris Phosphofructokinase In The T- State Length = 941 | Back alignment and structure |
| >pdb|3OPY|B Chain B, Crystal Structure Of Pichia Pastoris Phosphofructokinase In The T- State Length = 941 | Back alignment and structure |
| >pdb|3K2Q|A Chain A, Crystal Structure Of Pyrophosphate-Dependent Phosphofructokinase From Marinobacter Aquaeolei, Northeast Structural Genomics Consortium Target Mqr88 Length = 420 | Back alignment and structure |
| >pdb|1KZH|A Chain A, Structure Of A Pyrophosphate-dependent Phosphofructokinase From The Lyme Disease Spirochete Borrelia Burgdorferi Length = 555 | Back alignment and structure |
| >pdb|3HNO|A Chain A, Crystal Structure Of Pyrophosphate-Dependent Phosphofructokinase From Nitrosospira Multiformis. Northeast Structural Genomics Consortium Target Id Nmr42 Length = 419 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* Length = 487 | Back alignment and structure |
|---|
Score = 550 bits (1418), Expect = 0.0
Identities = 166/417 (39%), Positives = 232/417 (55%), Gaps = 14/417 (3%)
Query: 115 PSDEKWHGYINNNDRVLLKVINFSSPTSAGAECIDRDCTWVEQWVHRAGPREEIYFKPEE 174
+ + D ++ P+S + A R I+F P E
Sbjct: 44 KKYSSRTEFRDKTDYIMYNPRPRDEPSSENPVSVSP------LLCELAAARSRIHFNPTE 97
Query: 175 VKAAIVTCGGLCPGLNDVIRHIVITL-EIYGVKNIVGIPFGYRGFCDKELTE-MPLSRKV 232
IVTCGG+CPGLNDVIR I +T +Y VK ++G FGY G K + L R
Sbjct: 98 TTIGIVTCGGICPGLNDVIRSITLTGINVYNVKRVIGFRFGYWGLSKKGSQTAIELHRGR 157
Query: 233 VQNIHLSGGSLLGVSRGAPTVSEIVDSMEERGINMLFVLGGNGTHAGANAIHNECRKRRM 292
V NIH GG++LG SRG E+VD++E G+N+LF +GG+GT GA I E ++R +
Sbjct: 158 VTNIHHYGGTILGSSRGPQDPKEMVDTLERLGVNILFTVGGDGTQRGALVISQEAKRRGV 217
Query: 293 KVAVVGVPKTIDNDILLMDKTFGFDTAVEEAQRAINSAYIEAHSAYHGIGIVKLMGRSSG 352
++V GVPKTIDND+ +TFGF TAVE+A +AI +AY EA SA +G+G+VKLMGR SG
Sbjct: 218 DISVFGVPKTIDNDLSFSHRTFGFQTAVEKAVQAIRAAYAEAVSANYGVGVVKLMGRDSG 277
Query: 353 YIAMHASLASGQIDICLIPESPFNLHGPNGVLRHLKYLIETKGSAVVCVAEGAGQSLIKK 412
+IA A++AS Q +ICL+PE+P + V+ L+ S V+ VAEG GQ +
Sbjct: 278 FIAAQAAVASAQANICLVPENPISEQ---EVMSLLERRFCHSRSCVIIVAEGFGQDWGRG 334
Query: 413 TNATDASGNIVLGDVGVLIQQETKKYFKEIGV---PIDVKYIDPTYMIRACRANASDGIL 469
+ DASGN L D+GV++ ++ K + K VKYIDP+YMIRAC +A+D +
Sbjct: 335 SGGYDASGNKKLIDIGVILTEKVKAFLKANKSRYPDSTVKYIDPSYMIRACPPSANDALF 394
Query: 470 CTVLGQNAVHGAFAGFSGITVGLCNTHYAYFPIPEVISYPRAVDPNSRMWHRCLTST 526
C L AVH A AG +G + + + +Y PI S R +D ++W + T
Sbjct: 395 CATLATLAVHEAMAGATGCIIAMRHNNYILVPIKVATSVRRVLDLRGQLWRQVREIT 451
|
| >2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A* Length = 555 | Back alignment and structure |
|---|
| >4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A* Length = 319 | Back alignment and structure |
|---|
| >3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A Length = 419 | Back alignment and structure |
|---|
| >1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp} Length = 319 | Back alignment and structure |
|---|
| >1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A Length = 320 | Back alignment and structure |
|---|
| >3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Length = 762 | Back alignment and structure |
|---|
| >3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* Length = 762 | Back alignment and structure |
|---|
| >3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 766 | Back alignment and structure |
|---|
| >3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 766 | Back alignment and structure |
|---|
| >3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 989 | Back alignment and structure |
|---|
| >3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 989 | Back alignment and structure |
|---|
| >3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 787 | Back alignment and structure |
|---|
| >3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} Length = 787 | Back alignment and structure |
|---|
| >3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 941 | Back alignment and structure |
|---|
| >3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} Length = 941 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 532 | |||
| 2hig_A | 487 | 6-phospho-1-fructokinase; transferase; 2.40A {Tryp | 100.0 | |
| 3hno_A | 419 | Pyrophosphate-dependent phosphofructokinase; struc | 100.0 | |
| 1zxx_A | 319 | 6-phosphofructokinase; allosteric regulation, lact | 100.0 | |
| 1pfk_A | 320 | Phosphofructokinase; transferase(phosphotransferas | 100.0 | |
| 4a3s_A | 319 | 6-phosphofructokinase; transferase, glycolysis, de | 100.0 | |
| 2f48_A | 555 | Diphosphate--fructose-6-phosphate 1-phosphotransf; | 100.0 | |
| 3o8l_A | 762 | 6-phosphofructokinase, muscle type; transferase; H | 100.0 | |
| 3o8l_A | 762 | 6-phosphofructokinase, muscle type; transferase; H | 100.0 | |
| 3o8o_A | 787 | 6-phosphofructokinase subunit alpha; transferase; | 100.0 | |
| 3o8o_B | 766 | 6-phosphofructokinase subunit beta; transferase; H | 100.0 | |
| 3opy_A | 989 | 6-phosphofructo-1-kinase alpha-subunit; ATP bindin | 100.0 | |
| 3opy_B | 941 | 6-phosphofructo-1-kinase beta-subunit; ATP binding | 100.0 | |
| 3o8o_B | 766 | 6-phosphofructokinase subunit beta; transferase; H | 100.0 | |
| 3o8o_A | 787 | 6-phosphofructokinase subunit alpha; transferase; | 100.0 | |
| 3opy_B | 941 | 6-phosphofructo-1-kinase beta-subunit; ATP binding | 100.0 | |
| 3opy_A | 989 | 6-phosphofructo-1-kinase alpha-subunit; ATP bindin | 100.0 | |
| 1z0s_A | 278 | Probable inorganic polyphosphate/ATP-NAD kinase; A | 96.14 | |
| 2an1_A | 292 | Putative kinase; structural genomics, PSI, protein | 95.72 | |
| 3l49_A | 291 | ABC sugar (ribose) transporter, periplasmic substr | 95.22 | |
| 2i2c_A | 272 | Probable inorganic polyphosphate/ATP-NAD kinase 1; | 93.49 | |
| 3g1w_A | 305 | Sugar ABC transporter; sugar-binding protein, baci | 93.24 | |
| 3e3m_A | 355 | Transcriptional regulator, LACI family; structural | 92.87 | |
| 3rot_A | 297 | ABC sugar transporter, periplasmic sugar binding; | 91.66 | |
| 3h5o_A | 339 | Transcriptional regulator GNTR; transcription regu | 91.45 | |
| 3l6u_A | 293 | ABC-type sugar transport system periplasmic compo; | 90.72 | |
| 3k4h_A | 292 | Putative transcriptional regulator; structural gen | 90.55 | |
| 3dbi_A | 338 | Sugar-binding transcriptional regulator, LACI FAM; | 89.45 | |
| 3qk7_A | 294 | Transcriptional regulators; structural genomics, N | 89.12 | |
| 3kjx_A | 344 | Transcriptional regulator, LACI family; LACL famil | 88.94 | |
| 3egc_A | 291 | Putative ribose operon repressor; structural genom | 88.67 | |
| 3m9w_A | 313 | D-xylose-binding periplasmic protein; xylose bindi | 88.15 | |
| 3kke_A | 303 | LACI family transcriptional regulator; structural | 87.51 | |
| 3brq_A | 296 | HTH-type transcriptional regulator ASCG; transcrip | 87.43 | |
| 3ksm_A | 276 | ABC-type sugar transport system, periplasmic COMP; | 87.34 | |
| 8abp_A | 306 | L-arabinose-binding protein; binding proteins; HET | 87.18 | |
| 2bon_A | 332 | Lipid kinase; DAG kinase, transferase; 1.90A {Esch | 87.07 | |
| 3gbv_A | 304 | Putative LACI-family transcriptional regulator; NY | 86.82 | |
| 2dri_A | 271 | D-ribose-binding protein; sugar transport; HET: RI | 86.15 | |
| 3o74_A | 272 | Fructose transport system repressor FRUR; dual tra | 84.86 | |
| 2vk2_A | 306 | YTFQ, ABC transporter periplasmic-binding protein | 84.59 | |
| 3d8u_A | 275 | PURR transcriptional regulator; APC91343.1, vibrio | 84.24 | |
| 2fep_A | 289 | Catabolite control protein A; CCPA, transcriptiona | 83.85 | |
| 1u0t_A | 307 | Inorganic polyphosphate/ATP-NAD kinase; alpha-beta | 83.69 | |
| 3hs3_A | 277 | Ribose operon repressor; PSI-II, NYSGXRC, periplas | 83.61 | |
| 3bil_A | 348 | Probable LACI-family transcriptional regulator; st | 83.34 | |
| 2qv7_A | 337 | Diacylglycerol kinase DGKB; alpha-beta domain 1, b | 82.2 | |
| 3gyb_A | 280 | Transcriptional regulators (LACI-family transcript | 82.05 | |
| 2fvy_A | 309 | D-galactose-binding periplasmic protein; periplasm | 81.25 |
| >2hig_A 6-phospho-1-fructokinase; transferase; 2.40A {Trypanosoma brucei} PDB: 3f5m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-108 Score=880.74 Aligned_cols=421 Identities=39% Similarity=0.665 Sum_probs=383.5
Q ss_pred cccCCcccccCCCCCCCCCcccccCCCCcccCCCCCCCCCcccCCcccCCCeeeeeeeccCCCCCCCCcccccccchhhh
Q 009559 78 RFSLPHITDIFRDATPIPSTFCLRMRTPVTEDFADGYPSDEKWHGYINNNDRVLLKVINFSSPTSAGAECIDRDCTWVEQ 157 (532)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (532)
.|.+|+|.. +++|||+ ..+. . +++||+|+|+|++++..+.++ +..+.|.|.+.
T Consensus 28 ~~~i~~lg~-----~~~~~p~--------~~~~--~------~~~~~~~~~~v~~~~~~~~~~------~~~~~~~~~~~ 80 (487)
T 2hig_A 28 DLKVDRLPG-----ADYPNPS--------KKYS--S------RTEFRDKTDYIMYNPRPRDEP------SSENPVSVSPL 80 (487)
T ss_dssp TTCCEECSC-----CCEECTT--------CCGG--G------GGGSBSSCCEEESCCCBCC-----------CCBBSCCC
T ss_pred ccccCcCCC-----CCCCCcc--------cccC--C------CCeeeCCCCEEEEeeeccCCC------ccccccccchH
Confidence 456666652 6788744 3331 1 378999999999998775432 11234666677
Q ss_pred hhhhcCCCcccccCCCCcEEEEEeCCCCcchHHHHHHHHHHHHH-HcCCceEEEEccccccccc---CCceeecCCHHHH
Q 009559 158 WVHRAGPREEIYFKPEEVKAAIVTCGGLCPGLNDVIRHIVITLE-IYGVKNIVGIPFGYRGFCD---KELTEMPLSRKVV 233 (532)
Q Consensus 158 ~~~~agpr~~i~f~p~~~kiaIvt~GG~cPGlNavIr~iv~~l~-~ygv~~V~Gi~~Gy~GL~~---~~~~~i~Lt~~~V 233 (532)
+|++||||++|||+|+.+||||+||||||||||+|||++|+++. .||+.+||||++||+||++ +++ ++|+++.|
T Consensus 81 ~~~~agpr~~i~f~~~~~rIgIltsGGdaPGmNaaIravv~~a~~~~g~~~V~Gi~~G~~GLl~~~~~~~--~~L~~~~V 158 (487)
T 2hig_A 81 LCELAAARSRIHFNPTETTIGIVTCGGICPGLNDVIRSITLTGINVYNVKRVIGFRFGYWGLSKKGSQTA--IELHRGRV 158 (487)
T ss_dssp EEEECCCBSEESSCGGGCEEEEEECSSCCTTHHHHHHHHHHHHHHHHCCSEEEECSTGGGGGSHHHHTTC--EEECHHHH
T ss_pred HHHHcCCcceeeecCCCcEEEEEecCCCcchhhHHHHHHHHHHHHhCCCcEEEEEccCHHHhhhccCCCE--EECCHHHH
Confidence 99999999999999999999999999999999999999999996 4898789999999999975 355 56899999
Q ss_pred hhhhhcCCcceecccCCccHHHHHHHHHHhCCcEEEEeCChhhHHHHHHHHHHHHhcCCCceEeeeecccccCCCCCCcc
Q 009559 234 QNIHLSGGSLLGVSRGAPTVSEIVDSMEERGINMLFVLGGNGTHAGANAIHNECRKRRMKVAVVGVPKTIDNDILLMDKT 313 (532)
Q Consensus 234 ~~i~~~GGSiLGTSR~~~~~~~ivd~L~~~gId~L~vIGGdGT~~gA~~L~ee~~kr~~~I~VIGIPKTIDNDI~~tD~S 313 (532)
++|+++|||+|||||++++.++++++|++++||+||+||||||+++|++|++++++++++|+||||||||||||++||+|
T Consensus 159 ~~i~~~GGTiLGTsR~~~~~~~i~~~l~~~~Id~LvvIGGdgS~~~A~~L~e~~~~~g~~i~vVGIPkTIDNDl~gTD~T 238 (487)
T 2hig_A 159 TNIHHYGGTILGSSRGPQDPKEMVDTLERLGVNILFTVGGDGTQRGALVISQEAKRRGVDISVFGVPKTIDNDLSFSHRT 238 (487)
T ss_dssp TTGGGSSSCSSCCCCSCCCHHHHHHHHHHHTCSEEEEEECHHHHHHHHHHHHHHHHHTCCCEEEEEECCTTSSCCCSSCC
T ss_pred HHHHhCCCCeeccCCCCCCHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHHHHHHHhCCCceEEeccccccCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHhhhhccccEEEEEecCCCccHHHHHHhHhcCCccEEEcCCCCCCCCChhHHHHHHHHHHhc
Q 009559 314 FGFDTAVEEAQRAINSAYIEAHSAYHGIGIVKLMGRSSGYIAMHASLASGQIDICLIPESPFNLHGPNGVLRHLKYLIET 393 (532)
Q Consensus 314 fGFdTAv~~a~~aI~~a~~eA~S~~~~V~vVevMGR~sG~LA~~aaLAsg~ad~~LIPE~pf~leg~~~ll~~lk~~~~~ 393 (532)
||||||+++++++|+++++||.|+.++|+|||||||+|||||++++||+|+||+|||||.||+++ +++++|++++++
T Consensus 239 ~GFdTAv~~~~eaId~i~~tA~Sh~~rv~vVEVMGR~aG~LAl~agLA~g~ad~ilIPE~p~~l~---~i~~~i~~r~~~ 315 (487)
T 2hig_A 239 FGFQTAVEKAVQAIRAAYAEAVSANYGVGVVKLMGRDSGFIAAQAAVASAQANICLVPENPISEQ---EVMSLLERRFCH 315 (487)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEEECCSSCCHHHHHHHHHHTCCSEEECTTSCCCHH---HHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHhhCCCCEEEeCCCCCCHH---HHHHHHHHHHhc
Confidence 99999999999999999999998667999999999999999999999998899999999999986 899999999999
Q ss_pred cCceEEEeeccccchhhcccccccCCCCccccchHHHHHHHHHHHHHhcCcce---eEEEeCCCceeccCCCCchhHHHH
Q 009559 394 KGSAVVCVAEGAGQSLIKKTNATDASGNIVLGDVGVLIQQETKKYFKEIGVPI---DVKYIDPTYMIRACRANASDGILC 470 (532)
Q Consensus 394 kg~~VVVVAEGag~~l~~~~~~~DasGn~~l~dIg~~L~~~I~~~f~~~g~~~---~vk~idpgy~iRs~~p~a~D~i~c 470 (532)
++|+|||||||+++.++.+...+|++||+++++++.+|+++|+++|++.|+++ ++|+++|||+|||++|+++|++||
T Consensus 316 k~~~IIvVaEGag~~~~~~~~~~Da~G~~~l~~i~~~l~~~i~~~~~~~g~~~~~f~~R~~~lGh~QRgg~Psa~Dr~la 395 (487)
T 2hig_A 316 SRSCVIIVAEGFGQDWGRGSGGYDASGNKKLIDIGVILTEKVKAFLKANKSRYPDSTVKYIDPSYMIRACPPSANDALFC 395 (487)
T ss_dssp CSEEEEEEETTTTGGGCCC--CBCTTSCBCCCCHHHHHHHHHHHHHHTTTTTSSSCEEEEECCHHHHHSSCCCHHHHHHH
T ss_pred CCcEEEEEeCCCcccccccccccccccCcchhHHHHHHHHHHHHHHhhcCccccccceEEccCCcCccCCCCCHHHHHHH
Confidence 99999999999998877666678999999999999999999999998777766 899999999999999999999999
Q ss_pred HHhhHHHHHhHhcCCccEEEEEECCeeEEechhhHhcCCCcCCCCcHHHHHHHHhcCCCC
Q 009559 471 TVLGQNAVHGAFAGFSGITVGLCNTHYAYFPIPEVISYPRAVDPNSRMWHRCLTSTGQPD 530 (532)
Q Consensus 471 ~~LG~~AV~~a~aG~Tg~mVgi~n~~~~~vPi~ev~~~~k~vd~~~~~w~~~l~~tgQp~ 530 (532)
++||..||+++++|+||+|||+++++++++||+++++..|.|++++.||+++++.|+||.
T Consensus 396 ~~lG~~AV~~l~~G~tg~mVgi~~~~i~~vPl~ev~~~~k~v~~~~~~w~~~~~~~~~~~ 455 (487)
T 2hig_A 396 ATLATLAVHEAMAGATGCIIAMRHNNYILVPIKVATSVRRVLDLRGQLWRQVREITVDLG 455 (487)
T ss_dssp HHHHHHHHHHHHTTEESEEEEEETTEEEEEEHHHHTTEEEEECTTSHHHHHHHHHSCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEEEECCEEEEEEHHHHHccCCCcCcchHHHHHHHHHhCCcc
Confidence 999999999999999999999999999999999999999999999999999999999984
|
| >3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A | Back alignment and structure |
|---|
| >1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
| >1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A | Back alignment and structure |
|---|
| >4a3s_A 6-phosphofructokinase; transferase, glycolysis, degradosome; 2.30A {Bacillus subtilis} PDB: 6pfk_A 3u39_A 3pfk_A 4pfk_A* 1mto_A* | Back alignment and structure |
|---|
| >2f48_A Diphosphate--fructose-6-phosphate 1-phosphotransf; phosphotransfer, transferase; HET: FBP; 2.11A {Borrelia burgdorferi} SCOP: c.89.1.1 PDB: 1kzh_A* | Back alignment and structure |
|---|
| >3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* | Back alignment and structure |
|---|
| >3o8l_A 6-phosphofructokinase, muscle type; transferase; HET: ATP ADP; 3.20A {Oryctolagus cuniculus} PDB: 3o8n_A* | Back alignment and structure |
|---|
| >3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} | Back alignment and structure |
|---|
| >3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} | Back alignment and structure |
|---|
| >3o8o_B 6-phosphofructokinase subunit beta; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3o8o_A 6-phosphofructokinase subunit alpha; transferase; HET: F6P FDP; 2.90A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3opy_B 6-phosphofructo-1-kinase beta-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} | Back alignment and structure |
|---|
| >3opy_A 6-phosphofructo-1-kinase alpha-subunit; ATP binding, fructose-6-phosphate bindi magnesium binding, citrate binding, ADP binding; HET: ATP; 3.05A {Pichia pastoris} | Back alignment and structure |
|---|
| >1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A* | Back alignment and structure |
|---|
| >2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium} | Back alignment and structure |
|---|
| >3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
| >2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A* | Back alignment and structure |
|---|
| >3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125} | Back alignment and structure |
|---|
| >3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi} | Back alignment and structure |
|---|
| >3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
| >3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum} | Back alignment and structure |
|---|
| >3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum} | Back alignment and structure |
|---|
| >3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98} | Back alignment and structure |
|---|
| >3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12} | Back alignment and structure |
|---|
| >3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis} | Back alignment and structure |
|---|
| >3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi} | Back alignment and structure |
|---|
| >3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis} | Back alignment and structure |
|---|
| >3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A* | Back alignment and structure |
|---|
| >3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
| >3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
| >3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis} | Back alignment and structure |
|---|
| >8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A | Back alignment and structure |
|---|
| >2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A | Back alignment and structure |
|---|
| >3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis} | Back alignment and structure |
|---|
| >2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A* | Back alignment and structure |
|---|
| >3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A* | Back alignment and structure |
|---|
| >2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli} | Back alignment and structure |
|---|
| >3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
| >2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G* | Back alignment and structure |
|---|
| >1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A | Back alignment and structure |
|---|
| >3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
| >3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
| >2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A | Back alignment and structure |
|---|
| >3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
| >2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 532 | ||||
| d4pfka_ | 319 | c.89.1.1 (A:) ATP-dependent phosphofructokinase {B | 9e-61 | |
| d2f48a1 | 550 | c.89.1.1 (A:4-553) Pyrophosphate-dependent phospho | 6e-60 | |
| d1pfka_ | 320 | c.89.1.1 (A:) ATP-dependent phosphofructokinase {E | 9e-60 |
| >d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} Length = 319 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphofructokinase superfamily: Phosphofructokinase family: Phosphofructokinase domain: ATP-dependent phosphofructokinase species: Bacillus stearothermophilus [TaxId: 1422]
Score = 201 bits (511), Expect = 9e-61
Identities = 88/345 (25%), Positives = 149/345 (43%), Gaps = 43/345 (12%)
Query: 176 KAAIVTCGGLCPGLNDVIRHIVITLEIYGVKNIVGIPFGYRGFCDKELTEMPLSRKVVQN 235
+ ++T GG PG+N IR +V +GV+ + G+ GY G + L V +
Sbjct: 3 RIGVLTSGGDSPGMNAAIRSVVRKAIYHGVE-VYGVYHGYAGLIAGNI--KKLEVGDVGD 59
Query: 236 IHLSGGSLLGVSRGAPT-----VSEIVDSMEERGINMLFVLGGNGTHAGANAIHNECRKR 290
I GG++L +R + ++ +++ GI L V+GG+G++ GA +
Sbjct: 60 IIHRGGTILYTARCPEFKTEEGQKKGIEQLKKHGIQGLVVIGGDGSYQGAKKLTEHGFP- 118
Query: 291 RMKVAVVGVPKTIDNDILLMDKTFGFDTAVEEAQRAINSAYIEAHSAYHGIGIVKLMGRS 350
VGVP TIDNDI D T GFDTA+ AI+ + +++ ++++MGR
Sbjct: 119 -----CVGVPGTIDNDIPGTDFTIGFDTALNTVIDAIDKIR-DTATSHERTYVIEVMGRH 172
Query: 351 SGYIAMHASLASGQIDICLIPESPFNLHGPNGVLRHLKYLIETKGSAVVCVAEGAGQSLI 410
+G IA+ + LA G + LIPE+ ++++ L+ K +++ VAEG G +
Sbjct: 173 AGDIALWSGLAGGA-ETILIPEADYDMNDVIARLKRGHE--RGKKHSIIIVAEGVGSGVD 229
Query: 411 KKTNATDASGNIVLGDVGVLIQQETKKYFKEIGVPIDVKYIDPTYMIRACRANASDGILC 470
+A+G + + ++ R A D +L
Sbjct: 230 FGRQIQEATG-------------------------FETRVTVLGHVQRGGSPTAFDRVLA 264
Query: 471 TVLGQNAVHGAFAGFSGITVGLCNTHYAYFPIPEVISYPRAVDPN 515
+ LG AV G G VG+ N I E ++ +D
Sbjct: 265 SRLGARAVELLLEGKGGRCVGIQNNQLVDHDIAEALANKHTIDQR 309
|
| >d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Length = 550 | Back information, alignment and structure |
|---|
| >d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Length = 320 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 532 | |||
| d4pfka_ | 319 | ATP-dependent phosphofructokinase {Bacillus stearo | 100.0 | |
| d1pfka_ | 320 | ATP-dependent phosphofructokinase {Escherichia col | 100.0 | |
| d2f48a1 | 550 | Pyrophosphate-dependent phosphofructokinase {Lyme | 100.0 | |
| d2bona1 | 295 | Lipid kinase YegS {Escherichia coli [TaxId: 562]} | 90.84 | |
| d1dbqa_ | 282 | Purine repressor (PurR), C-terminal domain {Escher | 90.32 | |
| d2qv7a1 | 312 | Diacylglycerol kinase DgkB {Staphylococcus aureus | 89.69 | |
| d8abpa_ | 305 | L-arabinose-binding protein {Escherichia coli [Tax | 88.82 | |
| d1z0sa1 | 249 | Inorganic polyphosphate/ATP-NAD kinase PpnK {Archa | 87.9 | |
| d1jyea_ | 271 | Lac-repressor (lacR) core (C-terminal domain) {Esc | 87.73 | |
| d1u0ta_ | 302 | Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycob | 86.36 | |
| d1rrma_ | 385 | Lactaldehyde reductase FucO {Escherichia coli [Tax | 82.9 |
| >d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Phosphofructokinase superfamily: Phosphofructokinase family: Phosphofructokinase domain: ATP-dependent phosphofructokinase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=100.00 E-value=7.6e-81 Score=637.91 Aligned_cols=305 Identities=31% Similarity=0.476 Sum_probs=280.3
Q ss_pred cEEEEEeCCCCcchHHHHHHHHHHHHHHcCCceEEEEcccccccccCCceeecCCHHHHhhhhhcCCcceecccCCc---
Q 009559 175 VKAAIVTCGGLCPGLNDVIRHIVITLEIYGVKNIVGIPFGYRGFCDKELTEMPLSRKVVQNIHLSGGSLLGVSRGAP--- 251 (532)
Q Consensus 175 ~kiaIvt~GG~cPGlNavIr~iv~~l~~ygv~~V~Gi~~Gy~GL~~~~~~~i~Lt~~~V~~i~~~GGSiLGTSR~~~--- 251 (532)
.|||||||||+|||||++|+++++++..+|+ +|||+++||+||+++++ ++|+++.++.|+++|||+|||||.++
T Consensus 2 krIaIl~sGG~~pgiNa~i~~~v~~~~~~~~-~v~g~~~G~~Gl~~~~~--~~l~~~~~~~~~~~gGt~lgs~r~~~~~~ 78 (319)
T d4pfka_ 2 KRIGVLTSGGDSPGMNAAIRSVVRKAIYHGV-EVYGVYHGYAGLIAGNI--KKLEVGDVGDIIHRGGTILYTARCPEFKT 78 (319)
T ss_dssp CEEEEEEESSCCTTHHHHHHHHHHHHHHTTC-EEEEESSHHHHHHTTCE--EEECGGGGTTCTTCCSCTTCCCCCTTSSS
T ss_pred CEEEEECcCCCcHHHHHHHHHHHHHHHHCCC-EEEEEccchHHhcCCCc--ccCCHHHHHHHHhcCccccccCCCCcccc
Confidence 4999999999999999999999999999998 79999999999999987 56899999999999999999999765
Q ss_pred --cHHHHHHHHHHhCCcEEEEeCChhhHHHHHHHHHHHHhcCCCceEeeeecccccCCCCCCccCChhhHHHHHHHHHHH
Q 009559 252 --TVSEIVDSMEERGINMLFVLGGNGTHAGANAIHNECRKRRMKVAVVGVPKTIDNDILLMDKTFGFDTAVEEAQRAINS 329 (532)
Q Consensus 252 --~~~~ivd~L~~~gId~L~vIGGdGT~~gA~~L~ee~~kr~~~I~VIGIPKTIDNDI~~tD~SfGFdTAv~~a~~aI~~ 329 (532)
+.++++++|++++||+||+|||||||++|++|+++ +++|||||||||||+++||+||||+||+++++++|++
T Consensus 79 ~~~~~~~~~~l~~~~I~~li~iGG~~s~~~a~~L~~~------~~~vvgIPkTIDNDl~~td~t~Gf~TA~~~~~~~i~~ 152 (319)
T d4pfka_ 79 EEGQKKGIEQLKKHGIQGLVVIGGDGSYQGAKKLTEH------GFPCVGVPGTIDNDIPGTDFTIGFDTALNTVIDAIDK 152 (319)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEECHHHHHHHHHHHHT------TCCEEEEEBCSSCCCTTCSSCBTHHHHHHHHHHHHHH
T ss_pred cchhhhHHHHHHHhccceEEEecCchHHHHHHHHHhc------cCceeeeeeeccCCcCCccccccHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999873 6899999999999999999999999999999999999
Q ss_pred HHHhhhhccccEEEEEecCCCccHHHHHHhHhcCCccEEEcCCCCCCCCChhHHHHHHHHHHh-ccCceEEEeeccccch
Q 009559 330 AYIEAHSAYHGIGIVKLMGRSSGYIAMHASLASGQIDICLIPESPFNLHGPNGVLRHLKYLIE-TKGSAVVCVAEGAGQS 408 (532)
Q Consensus 330 a~~eA~S~~~~V~vVevMGR~sG~LA~~aaLAsg~ad~~LIPE~pf~leg~~~ll~~lk~~~~-~kg~~VVVVAEGag~~ 408 (532)
++.+|+| +++|+|||+|||+|||||++++||++ +|+|||||.||+++ ++++.|+++++ ++++++||||||+...
T Consensus 153 l~~~a~s-~~rv~ivEvMGR~aG~lA~~~~la~~-a~~iliPE~~~~~~---~~~~~i~~~~~~~k~~~ivvvsEG~~~~ 227 (319)
T d4pfka_ 153 IRDTATS-HERTYVIEVMGRHAGDIALWSGLAGG-AETILIPEADYDMN---DVIARLKRGHERGKKHSIIIVAEGVGSG 227 (319)
T ss_dssp HHHHHHH-TTCEEEEEECCSSCCHHHHHHHHHTT-CSEEECTTSCCCHH---HHHHHHHHHHHTTCSCEEEEEETTTCCH
T ss_pred HHhhccc-CcceEEEEecCCCCcHHHHHhhccCC-CcEEEecCCCCCHH---HHHHHHHHHHhhcCCeeEEEEecccchh
Confidence 9999976 67899999999999999999999998 99999999999975 89999999887 5899999999999742
Q ss_pred hhcccccccCCCCccccchHHHHHHHHHHHHHhcCcceeEEEeCCCceeccCCCCchhHHHHHHhhHHHHHhHhcCCccE
Q 009559 409 LIKKTNATDASGNIVLGDVGVLIQQETKKYFKEIGVPIDVKYIDPTYMIRACRANASDGILCTVLGQNAVHGAFAGFSGI 488 (532)
Q Consensus 409 l~~~~~~~DasGn~~l~dIg~~L~~~I~~~f~~~g~~~~vk~idpgy~iRs~~p~a~D~i~c~~LG~~AV~~a~aG~Tg~ 488 (532)
..+.+.+++.. | .++|+..|||+|||+.|+++|+++|++||+.||+++++|+||+
T Consensus 228 --------------------~~~~~~i~~~~---g--~~~r~~~lG~~qRgg~ps~~Dr~~a~~lG~~Av~~~~~g~sg~ 282 (319)
T d4pfka_ 228 --------------------VDFGRQIQEAT---G--FETRVTVLGHVQRGGSPTAFDRVLASRLGARAVELLLEGKGGR 282 (319)
T ss_dssp --------------------HHHHHHHHHHH---C--CCEEEEECGGGGGCSCCCHHHHHHHHHHHHHHHHHHHTTCCSE
T ss_pred --------------------hhhhhhhhhhc---C--ceeEEeecCchhcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCe
Confidence 34555565553 4 4689999999999999999999999999999999999999999
Q ss_pred EEEEECCeeEEechhhHhcCCCcCCCCcHHHH
Q 009559 489 TVGLCNTHYAYFPIPEVISYPRAVDPNSRMWH 520 (532)
Q Consensus 489 mVgi~n~~~~~vPi~ev~~~~k~vd~~~~~w~ 520 (532)
||+++|++++++||+++++.+|.+|+ ++|.
T Consensus 283 mv~i~~~~~~~vpl~~v~~~~k~v~~--~l~~ 312 (319)
T d4pfka_ 283 CVGIQNNQLVDHDIAEALANKHTIDQ--RMYA 312 (319)
T ss_dssp EEEEETTEEEEEEHHHHTTSCCCCCH--HHHH
T ss_pred EEEEECCEEEEEcHHHHHhcCCCCCH--HHHH
Confidence 99999999999999999999999986 4553
|
| >d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent phosphofructokinase {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} | Back information, alignment and structure |
|---|
| >d2bona1 e.52.1.2 (A:5-299) Lipid kinase YegS {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1dbqa_ c.93.1.1 (A:) Purine repressor (PurR), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d8abpa_ c.93.1.1 (A:) L-arabinose-binding protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1z0sa1 e.52.1.1 (A:1-249) Inorganic polyphosphate/ATP-NAD kinase PpnK {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1u0ta_ e.52.1.1 (A:) Inorganic polyphosphate/ATP-NAD kinase PpnK {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1rrma_ e.22.1.2 (A:) Lactaldehyde reductase FucO {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
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