Citrus Sinensis ID: 010250

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510----
Protein Sequence
MLRAKMVTSKLLQSSLKSQIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVKELKSQQ
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccEEEEEcccEEEEccccEEEEcccHHHHcccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccEEEEccccHHHHHHHHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccccccccHHHHHHHHHHHcccEEEEcccccccccccccccccccccccHHHHHHHcccccccccHHHHccHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccccEEEEccccEEEEEEEEccccccccccccccHHHHHHHHHHHcccEEEEccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHcccccHHHHcccccccccccHHHHHHHcHHHcccccccHHHHHHcccEEEEEccEEEEEEccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcHHHHHHHccccHHHHHHHHHHHHHcccccccEEEEccccHHHHHHHHHHHHHHHHHccccccEEEEEEcccccccEEEEEEcccHHHHHHHcccccccEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHccHEEEEEEcccEEcccccEEEccHHHHHHHHHHHHHccEEEEEcccccccccccccHHHHHcccccEEEEcHHHHccccccEEEEEEHHHHHHHHHHHcHcccEcccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccHHccHcEEEEEEEHccccccccccHHHHHHHHHHHHHHHccEEEEEcccEEEEccccEccHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MLRAKMVTSKLLQSSLKSQIgsftkhfsaskslsenlyqipllarfygtdassqkedsttngfkghdmlapftagwqstdvhplvieksegsyvydvngkkYLDSLAGLWCtalggsepRLVAAATAQLntlpfyhsfwnrttkpsLDLAKELLEMFTASKMAKVFFtnsgseandTQVKLVWYYnnalgrpnkkkFIARQKSYHGSTLIAAslsglpalhqkfdlpapfvlhtdcphywryahpgeteeEYSTRLANNLEDLILKEGPETIAAFIaepvigaggvipppatYFEKVQAVVKKYDILFIADEVICAFGrlgtmfgcdkysikpDLVSFAKALssaympigailvsPEVSEVIHsqsntlgsfshgftysghpVSCAVAIEALKIYKERNIVEQVNKIApkfqdgvkafsdspiigeirgtglilgtefadnkspnepfppewgigayfgaqceKHGMLvrvsgdnimmsppfimspEEVDELISKYGKALKATEERVKELKSQQ
Flexible Loop (DISEMBL)
MLRAKMVTSKLLQSSLKSQIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVKELKSQQ
Low Complexity Region (SEG)
MLRAKMVTskllqsslksqIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEpvigaggvipppaTYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVKELKSQQ
Disordered region (IsUnstruct)
**********************************ENLYQIPLLARFYGT***************GHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFAD*******FPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFI*******************************
Disordered Region (DISOPRED)
********SKLLQSSLK**********************************************KGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVKEL****
Disordered Region (DISEMBL)
************QSSLKSQIGSFTKHFSASKSLSENLYQIPLLARFYG***********TNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALK*************
Disordered Region (DISPRO)
*LRAKMVTSKLLQSSLKSQIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVKELK***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLRAKMVTSKLLQSSLKSQIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELxxxxxxxxxxxxxxxxxxxxxQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	514	2.2.26 [Sep-21-2011]
Q84P52	520	Gamma aminobutyrate trans	N/A	no	0.966	0.955	0.805	0.0
Q84P54	515	Gamma aminobutyrate trans	N/A	no	0.998	0.996	0.781	0.0
B8BBZ7	510	Probable gamma-aminobutyr	N/A	no	0.976	0.984	0.775	0.0
Q6ZCF0	510	Probable gamma-aminobutyr	yes	no	0.976	0.984	0.769	0.0
Q01K11	516	Gamma-aminobutyrate trans	N/A	no	0.914	0.910	0.825	0.0
Q7XN11	516	Gamma-aminobutyrate trans	no	no	0.914	0.910	0.827	0.0
Q94CE5	504	Gamma-aminobutyrate trans	yes	no	0.910	0.928	0.836	0.0
Q84P53	458	Gamma aminobutyrate trans	N/A	no	0.887	0.995	0.778	0.0
Q7XN12	497	Probable gamma-aminobutyr	no	no	0.916	0.947	0.760	0.0
Q01K12	497	Probable gamma-aminobutyr	N/A	no	0.916	0.947	0.760	0.0

>sp|Q84P52|GATP3_SOLLC Gamma aminobutyrate transaminase 3, chloroplastic OS=Solanum lycopersicum GN=GABA-TP3 PE=1 SV=1

 Score =  860 bits (2222), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/499 (80%), Positives = 455/499 (91%), Gaps = 2/499 (0%)

Query: 18  SQIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKEDSTTN--GFKGHDMLAPFTAG 75
           +Q+G   KH  A  +L + +    +  R+  T+ S + + S T+  G+KGHDMLAPFTAG
Sbjct: 17  NQVGPHVKHIPAVGNLQKQIVSDQIQVRWSSTETSLKNDISATDVRGYKGHDMLAPFTAG 76

Query: 76  WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY 135
           W STD+ PLVI+KSEGSYVYDVNGKKYLD+LAGLWCT+LGG+EPRLVAAAT QLN L FY
Sbjct: 77  WHSTDLEPLVIQKSEGSYVYDVNGKKYLDALAGLWCTSLGGNEPRLVAAATKQLNELAFY 136

Query: 136 HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 195
           HSFWNR+TKPSLDLAKELL++FTA+KMAK FFTNSGSEANDTQVKLVWYYNNALGRP+KK
Sbjct: 137 HSFWNRSTKPSLDLAKELLDLFTANKMAKAFFTNSGSEANDTQVKLVWYYNNALGRPDKK 196

Query: 196 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255
           KFIAR KSYHGSTLI+ASLSGLPALHQ+FDLPAPFVLHTDCPH+WR+  PGETEEE+STR
Sbjct: 197 KFIARTKSYHGSTLISASLSGLPALHQQFDLPAPFVLHTDCPHFWRFHQPGETEEEFSTR 256

Query: 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 315
           LANNLE+LILKEGPETIAAFIAEPV+GAGGVIPPPATYFEKVQA++KKYDILFIADEVIC
Sbjct: 257 LANNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQAILKKYDILFIADEVIC 316

Query: 316 AFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHG 375
            FGRLGTMFGC+KY+IKPDLVS AKALSS YMPIGA+LVSPEVS+VI+SQSN LG+FSHG
Sbjct: 317 GFGRLGTMFGCEKYNIKPDLVSVAKALSSGYMPIGAVLVSPEVSDVIYSQSNKLGTFSHG 376

Query: 376 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILG 435
           FTYSGHPVSCAVA+E LKIYKERNI+EQVN+I+PKFQ+G+KAFSDSPIIGEIRGTGL+ G
Sbjct: 377 FTYSGHPVSCAVALETLKIYKERNIIEQVNRISPKFQEGLKAFSDSPIIGEIRGTGLLHG 436

Query: 436 TEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISK 495
           TEF DNKSPN+PFPPEWGIGAYFGA+CEKHG+LVRV+GDNIMMSPP+I+S EE+DELI K
Sbjct: 437 TEFTDNKSPNDPFPPEWGIGAYFGARCEKHGVLVRVAGDNIMMSPPYILSLEEIDELIIK 496

Query: 496 YGKALKATEERVKELKSQQ 514
           YGKALK TE RV+ELKSQ+
Sbjct: 497 YGKALKDTENRVEELKSQK 515

Transaminase that degrades gamma-amino butyric acid (GABA) and uses pyruvate or glyoxylate as amino-group acceptor. Cannot use beta-alanine, ornithine, acetylornithine, serine, glycine, asparagine, glutamine, glutamate, valine, leucine, isoleucine, methionine, phenylalanine, histidine, lysine, arginine, aspartate, threonine, tyrosine, tryptophan, proline, or cysteine as amino donors.
Solanum lycopersicum (taxid: 4081)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: -

>sp|Q84P54|GATP1_SOLLC Gamma aminobutyrate transaminase 1, mitochondrial OS=Solanum lycopersicum GN=GABA-TP1 PE=1 SV=1

 Score =  853 bits (2204), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/516 (78%), Positives = 460/516 (89%), Gaps = 3/516 (0%)

Query: 1   MLRAKMVTSKLLQSSLKSQIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKEDSTT 60
           M +   +    +++++ +Q G   K   A  SL E++ +    AR+  T A  + + S T
Sbjct: 1   MAKISRLFGSTVKAAITAQAGFHGKRIPAVSSLQEHIVK-STPARYNSTQACLENDISGT 59

Query: 61  N--GFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSE 118
           +  GFKGHDMLAPFTAGWQSTDV PL+IEKSEGS+VYD+ G+KY+D+LAGLWCTALGG+E
Sbjct: 60  DNKGFKGHDMLAPFTAGWQSTDVDPLIIEKSEGSHVYDMQGRKYIDTLAGLWCTALGGNE 119

Query: 119 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ 178
           PRLV AAT QLNTLPFYHSFWNRTTKPSLDLAKELL+MFTA KMAK FFTNSGSEANDTQ
Sbjct: 120 PRLVDAATKQLNTLPFYHSFWNRTTKPSLDLAKELLDMFTAKKMAKAFFTNSGSEANDTQ 179

Query: 179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 238
           VKLVWYYNNALGRPNKKKFIAR K+YHGSTLI+ASL+GLPALHQ FDLPAPFVLHTDCPH
Sbjct: 180 VKLVWYYNNALGRPNKKKFIARAKAYHGSTLISASLTGLPALHQNFDLPAPFVLHTDCPH 239

Query: 239 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298
           YWRY  PGETEEE+STRLA NLEDLILKEGPETIAAFIAEPV+GAGGVIPPPATYF+K+Q
Sbjct: 240 YWRYHLPGETEEEFSTRLAKNLEDLILKEGPETIAAFIAEPVMGAGGVIPPPATYFDKIQ 299

Query: 299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEV 358
           AVVKKYDILFIADEVICAFGRLGTMFG D Y+IKPDLV+ AKALSSAYMPIGA+LVSPEV
Sbjct: 300 AVVKKYDILFIADEVICAFGRLGTMFGSDMYNIKPDLVTLAKALSSAYMPIGAVLVSPEV 359

Query: 359 SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF 418
           S+VIHSQSN LGSFSHGFTYSGHPV+CAVA+EA+KIYKERN+VE+VN+I+PKFQ+G+KAF
Sbjct: 360 SDVIHSQSNKLGSFSHGFTYSGHPVACAVALEAIKIYKERNMVERVNRISPKFQEGLKAF 419

Query: 419 SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMM 478
           SDSPIIGEIRG GLIL TEFA+NKSPN+ FPPEWG+GAYFGAQC+K+GMLVRV+GD IMM
Sbjct: 420 SDSPIIGEIRGLGLILATEFANNKSPNDHFPPEWGVGAYFGAQCQKNGMLVRVAGDTIMM 479

Query: 479 SPPFIMSPEEVDELISKYGKALKATEERVKELKSQQ 514
           SPPF+++PEE+DELI  YGKAL+ TE+RV+ELKSQ+
Sbjct: 480 SPPFVVTPEELDELIRIYGKALRETEKRVEELKSQK 515

Transaminase that degrades gamma-amino butyric acid (GABA) and uses pyruvate or glyoxylate as amino-group acceptor. Cannot use beta-alanine, ornithine, acetylornithine, serine, glycine, asparagine, glutamine, glutamate, valine, leucine, isoleucine, methionine, phenylalanine, histidine, lysine, arginine, aspartate, threonine, tyrosine, tryptophan, proline, or cysteine as amino donors. Acts predominantly in vegetative tissues.

Solanum lycopersicum (taxid: 4081)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|B8BBZ7|GATP3_ORYSI Probable gamma-aminobutyrate transaminase 3, mitochondrial OS=Oryza sativa subsp. indica GN=OsI_28220 PE=3 SV=1

 Score =  843 bits (2178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/504 (77%), Positives = 450/504 (89%), Gaps = 2/504 (0%)

Query: 11  LLQSSLKSQIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKEDSTTNGFKGHDMLA 70
           LL+S+  S+  S  KH +A+  L E   + P  AR++ +++S Q + +  NGFKGH MLA
Sbjct: 8   LLRSNAASKASSIVKHVAATGCLPEYSSEAP--ARYFSSESSLQVDSTEENGFKGHGMLA 65

Query: 71  PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 130
           PFTAGWQSTD+HPLVI++SEGSYVYD+NGKKY+D+LAGLW TALGG+EPRL+ AAT QLN
Sbjct: 66  PFTAGWQSTDLHPLVIDRSEGSYVYDINGKKYIDALAGLWSTALGGNEPRLIKAATDQLN 125

Query: 131 TLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG 190
            LPFYHSFWNRTTKPSLDLA E+L MFTA +M K+FFTNSGSEAND+QVKLVWYYNNALG
Sbjct: 126 KLPFYHSFWNRTTKPSLDLANEILSMFTAREMGKIFFTNSGSEANDSQVKLVWYYNNALG 185

Query: 191 RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 250
           RPNKKKFIAR KSYHGSTL++ASLSGLPALHQKFDLPAPFVLHTDCPHYWR+  P ETEE
Sbjct: 186 RPNKKKFIARSKSYHGSTLVSASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPDETEE 245

Query: 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 310
           E++TRLA NLE+LILKEGPETIAAFIAEPV+GAGGVIPPP TYFEK+QAV+KKYDIL IA
Sbjct: 246 EFATRLATNLENLILKEGPETIAAFIAEPVMGAGGVIPPPKTYFEKIQAVLKKYDILLIA 305

Query: 311 DEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG 370
           DEVI AFGRLGTMFGCD Y IKPDLVS AKALSSAYMPIGAILVSPE+++VI+SQSN LG
Sbjct: 306 DEVITAFGRLGTMFGCDMYDIKPDLVSIAKALSSAYMPIGAILVSPEITDVIYSQSNKLG 365

Query: 371 SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT 430
           SF+HGFTYSGHPVSCAVAIEALKIYKERNI+E V KIAP+FQ+G+KAFS SPI+GEIRG 
Sbjct: 366 SFAHGFTYSGHPVSCAVAIEALKIYKERNIIEHVQKIAPRFQEGIKAFSGSPIVGEIRGL 425

Query: 431 GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVD 490
           GLILGTEF DNKSPN+PFP EWG+G+ FGA+CEK GML+RV+GDNIM+SPP IM+P+EV+
Sbjct: 426 GLILGTEFVDNKSPNDPFPAEWGVGSLFGAECEKRGMLIRVAGDNIMLSPPLIMTPDEVE 485

Query: 491 ELISKYGKALKATEERVKELKSQQ 514
           E+ISKYG ALKATEER+ ELK+++
Sbjct: 486 EIISKYGDALKATEERIAELKAKR 509

Transaminase that degrades gamma-amino butyric acid (GABA).

Oryza sativa subsp. indica (taxid: 39946)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q6ZCF0|GATP3_ORYSJ Probable gamma-aminobutyrate transaminase 3, mitochondrial OS=Oryza sativa subsp. japonica GN=Os08g0205900 PE=3 SV=1

 Score =  837 bits (2161), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/504 (76%), Positives = 448/504 (88%), Gaps = 2/504 (0%)

Query: 11  LLQSSLKSQIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKEDSTTNGFKGHDMLA 70
           LL+S+  S+  +  KH +A+  L +   + P  AR++ ++ S Q + +  NGFKGH MLA
Sbjct: 8   LLRSNAASKASNIVKHVAATGCLPKYSSEAP--ARYFSSEPSLQVDSTEENGFKGHGMLA 65

Query: 71  PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 130
           PFTAGWQSTD+HPLVI++SEGSYVYD+NGKKY+D+LAGLW TALGG+EPRL+ AAT QLN
Sbjct: 66  PFTAGWQSTDLHPLVIDRSEGSYVYDINGKKYIDALAGLWSTALGGNEPRLIKAATDQLN 125

Query: 131 TLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG 190
            LPFYHSFWNRTTKPSLDLA E+L MFTA +M K+FFTNSGSEAND+QVKLVWYYNNALG
Sbjct: 126 KLPFYHSFWNRTTKPSLDLANEILSMFTAREMGKIFFTNSGSEANDSQVKLVWYYNNALG 185

Query: 191 RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 250
           RPNKKKFIAR KSYHGSTL++ASLSGLPALHQKFDLPAPFVLHTDCPHYWR+  P ETEE
Sbjct: 186 RPNKKKFIARSKSYHGSTLVSASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPDETEE 245

Query: 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 310
           E++TRLA NLE+LILKEGPETIAAFIAEPV+GAGGVIPPP TYFEK+QAV+KKYDIL IA
Sbjct: 246 EFATRLATNLENLILKEGPETIAAFIAEPVMGAGGVIPPPKTYFEKIQAVLKKYDILLIA 305

Query: 311 DEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG 370
           DEVI AFGRLGTMFGCD Y IKPDLVS AKALSSAYMPIGAILVSPE+++VI+SQSN LG
Sbjct: 306 DEVITAFGRLGTMFGCDMYDIKPDLVSIAKALSSAYMPIGAILVSPEITDVIYSQSNKLG 365

Query: 371 SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT 430
           SF+HGFTYSGHPVSCAVAIEALKIYKERNI+E V KIAP+FQ+G+KAFS SPI+GEIRG 
Sbjct: 366 SFAHGFTYSGHPVSCAVAIEALKIYKERNIIEHVQKIAPRFQEGIKAFSGSPIVGEIRGL 425

Query: 431 GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVD 490
           GLILGTEF DNKSPN+PFP EWG+G+ FGA+CEK GML+RV+GDNIM+SPP IM+P+EV+
Sbjct: 426 GLILGTEFVDNKSPNDPFPAEWGVGSLFGAECEKRGMLIRVAGDNIMLSPPLIMTPDEVE 485

Query: 491 ELISKYGKALKATEERVKELKSQQ 514
           E+I KYG ALKATEER+ ELK+++
Sbjct: 486 EIICKYGDALKATEERIAELKAKR 509

Transaminase that degrades gamma-amino butyric acid (GABA).

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q01K11|GATP1_ORYSI Gamma-aminobutyrate transaminase 1, mitochondrial OS=Oryza sativa subsp. indica GN=OsI_17385 PE=3 SV=1

 Score =  833 bits (2151), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/470 (82%), Positives = 431/470 (91%)

Query: 45  RFYGTDASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLD 104
           R + +  S Q   +  NGFKGH MLAPFTAGWQSTDVHPLVIE+SEGSYVYD++GKKYLD
Sbjct: 45  RHFSSVPSPQSNSTEENGFKGHGMLAPFTAGWQSTDVHPLVIERSEGSYVYDIDGKKYLD 104

Query: 105 SLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAK 164
           SLAGLWCTALGGSEPRL  AAT QL+ LPFYHSFWNRTTKPSLDLAKELL MFTA +M K
Sbjct: 105 SLAGLWCTALGGSEPRLAKAATEQLHKLPFYHSFWNRTTKPSLDLAKELLSMFTAREMGK 164

Query: 165 VFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF 224
           VFFTNSGSEAND+QVKLVWYYNNALGRP+KKKFIAR KSYHGSTLI+ASLSGLPALHQKF
Sbjct: 165 VFFTNSGSEANDSQVKLVWYYNNALGRPDKKKFIARSKSYHGSTLISASLSGLPALHQKF 224

Query: 225 DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAG 284
           DLPAPFVLHTDCPHYWR+  PGETEEE++TRLANNLE+LILKEGPETIAAFIAEPV+GAG
Sbjct: 225 DLPAPFVLHTDCPHYWRFHLPGETEEEFATRLANNLEELILKEGPETIAAFIAEPVMGAG 284

Query: 285 GVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSS 344
           GVIPPP TYFEKVQA+VKKYDILFIADEVI AFGRLGTMFG D Y+IKPDLVS AKALSS
Sbjct: 285 GVIPPPKTYFEKVQAIVKKYDILFIADEVITAFGRLGTMFGSDMYNIKPDLVSMAKALSS 344

Query: 345 AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV 404
           AY+PIGAI+VSPE+S+VIHSQSN LGSF+HGFTYSGHPV+CAVAIEALKIY+ERNI + V
Sbjct: 345 AYVPIGAIMVSPEISDVIHSQSNKLGSFAHGFTYSGHPVACAVAIEALKIYQERNIPDHV 404

Query: 405 NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK 464
            +I+P+FQ+GVKAF+ SPI+GEIRG GLILGTEFADNKSPN+PFP EWG+GA FGA+C+K
Sbjct: 405 KQISPRFQEGVKAFAGSPIVGEIRGVGLILGTEFADNKSPNDPFPAEWGVGAIFGAECQK 464

Query: 465 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVKELKSQQ 514
            GMLVRV+GDNIMMSPP IM+P+EV+EL+S YG ALKATEERV ELKS++
Sbjct: 465 RGMLVRVAGDNIMMSPPLIMTPDEVEELVSIYGDALKATEERVAELKSKK 514

Transaminase that degrades gamma-amino butyric acid (GABA) and uses pyruvate as amino-group acceptor, but not 2-oxoglutarate.

Oryza sativa subsp. indica (taxid: 39946)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q7XN11|GATP1_ORYSJ Gamma-aminobutyrate transaminase 1, mitochondrial OS=Oryza sativa subsp. japonica GN=OSL2 PE=1 SV=2

 Score =  833 bits (2151), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/470 (82%), Positives = 432/470 (91%)

Query: 45  RFYGTDASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLD 104
           R + +  S Q   +  NGFKGH MLAPFTAGWQSTDVHPLVIE+SEGSYVYD++GKKYLD
Sbjct: 45  RHFSSVPSPQYNSTEENGFKGHGMLAPFTAGWQSTDVHPLVIERSEGSYVYDIDGKKYLD 104

Query: 105 SLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAK 164
           SLAGLWCTALGGSEPRLV AAT QL+ LPFYHSFWNRTTKPSLDLAKELL MFTA +M K
Sbjct: 105 SLAGLWCTALGGSEPRLVKAATEQLHKLPFYHSFWNRTTKPSLDLAKELLSMFTAREMGK 164

Query: 165 VFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF 224
           VFFTNSGSEAND+QVKLVWYYNNALGRP+KKKFIAR KSYHGSTLI+ASLSGLPALHQKF
Sbjct: 165 VFFTNSGSEANDSQVKLVWYYNNALGRPDKKKFIARSKSYHGSTLISASLSGLPALHQKF 224

Query: 225 DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAG 284
           DLPAPFVLHTDCPHYWR+  PGETEEE++TRLANNLE+LILKEGPETIAAFIAEPV+GAG
Sbjct: 225 DLPAPFVLHTDCPHYWRFHLPGETEEEFATRLANNLEELILKEGPETIAAFIAEPVMGAG 284

Query: 285 GVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSS 344
           GVIPPP TYFEKVQA+VKKYDILFIADEVI AFGRLGTMFG D Y+IKPDLVS AKALSS
Sbjct: 285 GVIPPPKTYFEKVQAIVKKYDILFIADEVITAFGRLGTMFGSDMYNIKPDLVSMAKALSS 344

Query: 345 AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV 404
           AY+PIGAI+VSPE+S+VIHSQSN LGSF+HGFTYSGHPV+CAVAIEALKIY+ERNI + V
Sbjct: 345 AYVPIGAIMVSPEISDVIHSQSNKLGSFAHGFTYSGHPVACAVAIEALKIYQERNIPDHV 404

Query: 405 NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK 464
            +I+P+FQ+GVKAF+ SPI+GEIRG GLILGTEFADNKSPN+PFP EWG+GA FGA+C+K
Sbjct: 405 KQISPRFQEGVKAFAGSPIVGEIRGVGLILGTEFADNKSPNDPFPAEWGVGAIFGAECQK 464

Query: 465 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVKELKSQQ 514
            GMLVRV+GDNIMMSPP IM+P+EV+EL+S YG ALKATEERV ELKS++
Sbjct: 465 RGMLVRVAGDNIMMSPPLIMTPDEVEELVSIYGDALKATEERVAELKSKK 514

Transaminase that degrades gamma-amino butyric acid (GABA) and uses pyruvate as amino-group acceptor, but not 2-oxoglutarate. Not involved in the interaction with blast fungus.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q94CE5|GATP_ARATH Gamma-aminobutyrate transaminase POP2, mitochondrial OS=Arabidopsis thaliana GN=POP2 PE=1 SV=1

 Score =  828 bits (2138), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/471 (83%), Positives = 431/471 (91%), Gaps = 3/471 (0%)

Query: 45  RFYGTDASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLD 104
           R + T+A+ +K++  T G KGHDMLAPFTAGWQS D+ PLVI KSEGSYVYD  GKKYLD
Sbjct: 34  RIFTTEAAPEKKN--TVGSKGHDMLAPFTAGWQSADLDPLVIAKSEGSYVYDDTGKKYLD 91

Query: 105 SLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAK 164
           SLAGLWCTALGG+EPRLV+AA  QLNTLPFYHSFWNRTTKPSLDLAK LLEMFTA+KMAK
Sbjct: 92  SLAGLWCTALGGNEPRLVSAAVEQLNTLPFYHSFWNRTTKPSLDLAKVLLEMFTANKMAK 151

Query: 165 VFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF 224
            FFT+ GS+ANDTQVKLVWYYNNALGRP KKKFIAR+KSYHGSTLI+ASLSGLP LHQ F
Sbjct: 152 AFFTSGGSDANDTQVKLVWYYNNALGRPEKKKFIARKKSYHGSTLISASLSGLPPLHQNF 211

Query: 225 DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAG 284
           DLPAPFVLHTDCPHYWR+  PGETEEE+STRLA NLEDLI+KEGPETI AFIAEPV+GAG
Sbjct: 212 DLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLAKNLEDLIIKEGPETIGAFIAEPVMGAG 271

Query: 285 GVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSS 344
           GVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY+IKPDLV+ AKALSS
Sbjct: 272 GVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVTLAKALSS 331

Query: 345 AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV 404
           AYMPIGAIL+S EV++VI+S S+ LG FSHGFTYSGHPVSCAVAIEALKIYKERNI E V
Sbjct: 332 AYMPIGAILMSQEVADVINSHSSKLGVFSHGFTYSGHPVSCAVAIEALKIYKERNIPEYV 391

Query: 405 NKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE 463
            K+AP+FQDGVKAF S SPIIGE RGTGLILGTEF DNKSPNEPFPPEWG+GA+FGA+C+
Sbjct: 392 AKVAPRFQDGVKAFASGSPIIGETRGTGLILGTEFVDNKSPNEPFPPEWGVGAFFGAECQ 451

Query: 464 KHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVKELKSQQ 514
           KHGMLVRV+GD I+MSPP I+SPEE+DELIS YGKALKATEE+VKELK+Q 
Sbjct: 452 KHGMLVRVAGDGILMSPPLIISPEEIDELISIYGKALKATEEKVKELKAQH 502

Transaminase that degrades gamma-amino butyric acid (GABA) and uses pyruvate or glyoxylate as amino-group acceptor, but not 2-oxoglutarate. The pyruvate-dependent activity is reversible while the glyoxylate-dependent activity is irreversible. Cannot use beta-alanine, ornithine, acetylornithine, serine, glycine, asparagine, glutamine, glutamate, valine, leucine, isoleucine, methionine, phenylalanine, histidine, lysine, arginine, aspartate, threonine, tyrosine, tryptophan, proline, or cysteine as amino donors. Modulates steady-state GABA levels in diploid pistil cells and the haploid pollen tube. Involved in the formation of a gradient of GABA along the pollen tube path.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q84P53|GATP2_SOLLC Gamma aminobutyrate transaminase 2 OS=Solanum lycopersicum GN=GABA-TP2 PE=1 SV=1

 Score =  768 bits (1984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/457 (77%), Positives = 405/457 (88%), Gaps = 1/457 (0%)

Query: 58  STTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGS 117
           + TNGF GHDMLAPFTA W   D+ PLVI+K+EGSYVY VNGKKYLDSL+GLWCT LGGS
Sbjct: 2   AKTNGFMGHDMLAPFTAAWM-IDMGPLVIDKAEGSYVYGVNGKKYLDSLSGLWCTVLGGS 60

Query: 118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 177
           EPRL+ AA+ QLN   FYHSFWNRTTKPSLDLAKEL+ MFTA+KM KVFFT+SGSEANDT
Sbjct: 61  EPRLIEAASKQLNKSAFYHSFWNRTTKPSLDLAKELINMFTANKMGKVFFTSSGSEANDT 120

Query: 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP 237
           QVKLVWYYNNA+GRPNKKK I+R+ +YHGST + A LSGLP+LH KFDLP P++LHTDCP
Sbjct: 121 QVKLVWYYNNAIGRPNKKKIISRKNAYHGSTYMTAGLSGLPSLHLKFDLPPPYILHTDCP 180

Query: 238 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKV 297
           HYW Y  PGETEEEYSTRLANNLE+LILKEGPET+AAFIAEPV+G  GVI PPATYFEK+
Sbjct: 181 HYWNYHLPGETEEEYSTRLANNLENLILKEGPETVAAFIAEPVMGGAGVIIPPATYFEKI 240

Query: 298 QAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPE 357
           QAV+KKYDILFIADEVIC FGRLGTMFGCDKY+IKPDLVS AKALS  Y+PIGA+LVS E
Sbjct: 241 QAVLKKYDILFIADEVICGFGRLGTMFGCDKYNIKPDLVSIAKALSGGYIPIGAVLVSEE 300

Query: 358 VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA 417
           +S+VI SQSN LG F HGFTYSGHPV+CAVA+EALKIYKE+NI E VNK++PK Q+G+KA
Sbjct: 301 ISKVIMSQSNQLGVFCHGFTYSGHPVACAVALEALKIYKEKNITEVVNKLSPKLQEGLKA 360

Query: 418 FSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM 477
           F DSPIIGEIRGTGL+L TEF DNKSPN+PFPPEWG+G YFG+QC+KHGMLV  SGD++ 
Sbjct: 361 FIDSPIIGEIRGTGLVLSTEFVDNKSPNDPFPPEWGVGTYFGSQCQKHGMLVSFSGDHVN 420

Query: 478 MSPPFIMSPEEVDELISKYGKALKATEERVKELKSQQ 514
           M+PPF +S EE+DE+IS YGKALK TE+RV+ELKSQ+
Sbjct: 421 MAPPFTLSLEELDEMISIYGKALKDTEKRVEELKSQK 457

Transaminase that degrades gamma-amino butyric acid (GABA) and uses pyruvate or glyoxylate as amino-group acceptor. Cannot use beta-alanine, ornithine, acetylornithine, serine, glycine, asparagine, glutamine, glutamate, valine, leucine, isoleucine, methionine, phenylalanine, histidine, lysine, arginine, aspartate, threonine, tyrosine, tryptophan, proline, or cysteine as amino donors. May be responsible for establishing the GABA gradient in the carpel.

Solanum lycopersicum (taxid: 4081)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q7XN12|GATP2_ORYSJ Probable gamma-aminobutyrate transaminase 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os04g0614500 PE=2 SV=2

 Score =  768 bits (1983), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/472 (76%), Positives = 410/472 (86%), Gaps = 1/472 (0%)

Query: 44  ARFYGTDASSQKEDSTT-NGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKY 102
           AR + T  SS   DST  NGFKGH MLAPFTAGW STD+ PL+IE+SEGSYVYD  G KY
Sbjct: 25  ARKFSTSGSSPLLDSTEGNGFKGHSMLAPFTAGWHSTDLEPLIIERSEGSYVYDSKGNKY 84

Query: 103 LDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKM 162
           LD+LAGLWCTALGGSEPRLV AAT QLN LPFYHSFWN T KP LDLA+EL+ MFTA +M
Sbjct: 85  LDTLAGLWCTALGGSEPRLVKAATDQLNKLPFYHSFWNSTAKPPLDLAEELISMFTAKEM 144

Query: 163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222
            KVFFTNSGSEAND+QVKLVWYYNNALGRPNKKK IA+ ++YHGSTLI+ASLSGLPA+H 
Sbjct: 145 GKVFFTNSGSEANDSQVKLVWYYNNALGRPNKKKIIAQSQAYHGSTLISASLSGLPAMHL 204

Query: 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIG 282
           KFDLPAPFVLHTDCPHYWR+  PGE EEE++TRLA+NLE+LILKEGPET+AAFIAEPVIG
Sbjct: 205 KFDLPAPFVLHTDCPHYWRFGLPGEAEEEFATRLADNLENLILKEGPETVAAFIAEPVIG 264

Query: 283 AGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKAL 342
           AGGVIPPP TYFEK+QAV++KYD+LFIADEVI  FGRLGTMFG D Y+IKPDLVS AKAL
Sbjct: 265 AGGVIPPPKTYFEKIQAVLQKYDVLFIADEVITGFGRLGTMFGSDLYNIKPDLVSLAKAL 324

Query: 343 SSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVE 402
           SSAY+PIGA LVSPE+S+V+HSQSN +G F+HGFTYSGHPVSCAVA+EALKIY+ERNI  
Sbjct: 325 SSAYVPIGATLVSPEISDVVHSQSNKIGFFAHGFTYSGHPVSCAVALEALKIYRERNIPA 384

Query: 403 QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC 462
            V +I+P+FQ+G+KAF+ S IIGE RG GL+L TEFA+NKSPN+PFP EWG+   FGA+C
Sbjct: 385 HVKQISPRFQEGIKAFAGSSIIGETRGVGLLLATEFANNKSPNDPFPVEWGVAQIFGAEC 444

Query: 463 EKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVKELKSQQ 514
           +K GMLV+V GD I MSPP IMS  EVD L+S YG+ALKATEERV EL+S++
Sbjct: 445 KKRGMLVKVVGDEIAMSPPLIMSQREVDGLVSIYGEALKATEERVAELRSKK 496

Transaminase that degrades gamma-amino butyric acid (GABA).

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

>sp|Q01K12|GATP2_ORYSI Probable gamma-aminobutyrate transaminase 2, mitochondrial OS=Oryza sativa subsp. indica GN=OsI_17384 PE=3 SV=1

 Score =  768 bits (1983), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/472 (76%), Positives = 410/472 (86%), Gaps = 1/472 (0%)

Query: 44  ARFYGTDASSQKEDSTT-NGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKY 102
           AR + T  SS   DST  NGFKGH MLAPFTAGW STD+ PL+IE+SEGSYVYD  G KY
Sbjct: 25  ARKFSTSGSSPLLDSTEGNGFKGHSMLAPFTAGWHSTDLEPLIIERSEGSYVYDSKGNKY 84

Query: 103 LDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKM 162
           LD+LAGLWCTALGGSEPRLV AAT QLN LPFYHSFWN T KP LDLA+EL+ MFTA +M
Sbjct: 85  LDTLAGLWCTALGGSEPRLVKAATDQLNKLPFYHSFWNSTAKPPLDLAEELISMFTAKEM 144

Query: 163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ 222
            KVFFTNSGSEAND+QVKLVWYYNNALGRPNKKK IA+ ++YHGSTLI+ASLSGLPA+H 
Sbjct: 145 GKVFFTNSGSEANDSQVKLVWYYNNALGRPNKKKIIAQSQAYHGSTLISASLSGLPAMHL 204

Query: 223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIG 282
           KFDLPAPFVLHTDCPHYWR+  PGE EEE++TRLA+NLE+LILKEGPET+AAFIAEPVIG
Sbjct: 205 KFDLPAPFVLHTDCPHYWRFGLPGEAEEEFATRLADNLENLILKEGPETVAAFIAEPVIG 264

Query: 283 AGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKAL 342
           AGGVIPPP TYFEK+QAV++KYD+LFIADEVI  FGRLGTMFG D Y+IKPDLVS AKAL
Sbjct: 265 AGGVIPPPKTYFEKIQAVLQKYDVLFIADEVITGFGRLGTMFGSDLYNIKPDLVSLAKAL 324

Query: 343 SSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVE 402
           SSAY+PIGA LVSPE+S+V+HSQSN +G F+HGFTYSGHPVSCAVA+EALKIY+ERNI  
Sbjct: 325 SSAYVPIGATLVSPEISDVVHSQSNKIGFFAHGFTYSGHPVSCAVALEALKIYRERNIPA 384

Query: 403 QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC 462
            V +I+P+FQ+G+KAF+ S IIGE RG GL+L TEFA+NKSPN+PFP EWG+   FGA+C
Sbjct: 385 HVKQISPRFQEGIKAFAGSSIIGETRGVGLLLATEFANNKSPNDPFPVEWGVAQIFGAEC 444

Query: 463 EKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVKELKSQQ 514
           +K GMLV+V GD I MSPP IMS  EVD L+S YG+ALKATEERV EL+S++
Sbjct: 445 KKRGMLVKVVGDEIAMSPPLIMSQREVDGLVSIYGEALKATEERVAELRSKK 496

Transaminase that degrades gamma-amino butyric acid (GABA).

Oryza sativa subsp. indica (taxid: 39946)

EC: 2

EC: .

EC: 6

EC: .

EC: 1

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	514
224086589	514	predicted protein [Populus trichocarpa]	0.990	0.990	0.868	0.0
405780100	514	gamma-aminobutyrate transaminase 2 [Malu	0.990	0.990	0.842	0.0
405780098	514	gamma-aminobutyrate transaminase 1 [Malu	0.990	0.990	0.838	0.0
449460004	507	PREDICTED: gamma aminobutyrate transamin	0.984	0.998	0.817	0.0
225464809	516	PREDICTED: uncharacterized aminotransfer	0.990	0.986	0.817	0.0
449528047	504	PREDICTED: gamma aminobutyrate transamin	0.978	0.998	0.820	0.0
356538512	513	PREDICTED: uncharacterized aminotransfer	0.980	0.982	0.829	0.0
296087517	522	unnamed protein product [Vitis vinifera]	0.990	0.975	0.808	0.0
255560072	528	aminobutyrate aminotransferase, putative	0.974	0.948	0.818	0.0
356544361	517	PREDICTED: uncharacterized aminotransfer	0.947	0.941	0.843	0.0

>gi|224086589|ref|XP_002307913.1| predicted protein [Populus trichocarpa] gi|222853889|gb|EEE91436.1| predicted protein [Populus trichocarpa]

 Score =  930 bits (2403), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/511 (86%), Positives = 479/511 (93%), Gaps = 2/511 (0%)

Query: 6   MVTSKLLQSSLKSQIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKEDSTTNG--F 63
           MV SKLL+S+LKSQ+ S  K+ +AS S  E+  + P LAR Y T AS QKEDST +G  F
Sbjct: 1   MVISKLLRSTLKSQLRSCIKNGTASGSSQEHHLRAPFLARLYSTKASLQKEDSTIDGNSF 60

Query: 64  KGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVA 123
           KGHDMLAPFTAGWQS+D++PLVIEKSEGSYVYD+NGKKYLD+LAGLWCTALGG+EPRLVA
Sbjct: 61  KGHDMLAPFTAGWQSSDLNPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGNEPRLVA 120

Query: 124 AATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVW 183
           AAT QLN LPFYHSFWNRTTKPSLDLAKELLE FTASKMAK FFTNSGSEANDTQVKLVW
Sbjct: 121 AATEQLNKLPFYHSFWNRTTKPSLDLAKELLETFTASKMAKAFFTNSGSEANDTQVKLVW 180

Query: 184 YYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYA 243
           YYNNALGRPNKKKFIAR KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRY 
Sbjct: 181 YYNNALGRPNKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYH 240

Query: 244 HPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK 303
            PGETEEE+STRLANNLE+LILKEGPETIAAFIAEPV+GAGGVIPPPATYF+K+QAVVKK
Sbjct: 241 LPGETEEEFSTRLANNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFDKIQAVVKK 300

Query: 304 YDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIH 363
           Y+ILFIADEVICAFGRLGTM+GCDKY+IKPDLVS AKALSSAYMPIGA++VSPEVS+VIH
Sbjct: 301 YEILFIADEVICAFGRLGTMYGCDKYNIKPDLVSVAKALSSAYMPIGAVMVSPEVSDVIH 360

Query: 364 SQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPI 423
           SQS+ LGSFSHGFTYSGHPV+CAVAIEALKIYKERNI++QVN+IAPKFQDGVKAF+DSPI
Sbjct: 361 SQSSKLGSFSHGFTYSGHPVACAVAIEALKIYKERNILDQVNRIAPKFQDGVKAFADSPI 420

Query: 424 IGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFI 483
           IGEIRGTGLILGTEF DNKSPN+PFPPEWG+GAYFGAQCEK GMLVRV+GDNIMMSPPFI
Sbjct: 421 IGEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAQCEKDGMLVRVAGDNIMMSPPFI 480

Query: 484 MSPEEVDELISKYGKALKATEERVKELKSQQ 514
           MSPEEVD LISKYGKAL+ATEERVKELKSQ 
Sbjct: 481 MSPEEVDVLISKYGKALRATEERVKELKSQH 511

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|405780100|gb|AFS28621.1| gamma-aminobutyrate transaminase 2 [Malus x domestica]

 Score =  906 bits (2341), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 432/513 (84%), Positives = 470/513 (91%), Gaps = 4/513 (0%)

Query: 6   MVTSKLLQSSLKSQIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKEDSTTN---- 61
           M  S+ L+S+L++Q+ S TK+ + S+S  E+L+ +P LAR Y T +S QKE+ TT     
Sbjct: 1   MGISRFLRSNLRTQLVSSTKYAAVSRSPQEHLFMVPFLARSYSTGSSVQKEEPTTVEKGL 60

Query: 62  GFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRL 121
           GFKGHDMLAPFT GWQSTD+HPL+IEKSEGSY YD NGKKYLD+LAGLWCTALGG+EPRL
Sbjct: 61  GFKGHDMLAPFTPGWQSTDLHPLIIEKSEGSYAYDSNGKKYLDALAGLWCTALGGNEPRL 120

Query: 122 VAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKL 181
           VAAAT QLNTLPFYHSFWNRTT+PSLDLAKELLE FTA+KMAK FFTNSGSEANDTQVKL
Sbjct: 121 VAAATKQLNTLPFYHSFWNRTTRPSLDLAKELLETFTATKMAKAFFTNSGSEANDTQVKL 180

Query: 182 VWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241
           VWYYNNALGRP+KKKFIAR KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR
Sbjct: 181 VWYYNNALGRPDKKKFIARHKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 240

Query: 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301
           +  PGETEEE+STRLANNLE+LILKEGPETIAAFIAEPV+GAGGVI PPATYFEKVQAVV
Sbjct: 241 HHLPGETEEEFSTRLANNLENLILKEGPETIAAFIAEPVMGAGGVITPPATYFEKVQAVV 300

Query: 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEV 361
           KKYDILFIADEVICAFGRLG M+GCDKY+IKPDLVS AKALSSAYMPIGA+LVSPEVS+V
Sbjct: 301 KKYDILFIADEVICAFGRLGYMYGCDKYNIKPDLVSVAKALSSAYMPIGAVLVSPEVSDV 360

Query: 362 IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS 421
           IHSQS+ LGSFSHGFTYSGHPV+CAVAIE LKIYKERNIVEQV  IAP+FQDGVKAFSDS
Sbjct: 361 IHSQSSKLGSFSHGFTYSGHPVACAVAIETLKIYKERNIVEQVRSIAPRFQDGVKAFSDS 420

Query: 422 PIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPP 481
           PIIGEIRGTGLILGTEF DNKSPN+PFP EWG+GAYFGAQCEKHGML+RV+GDNIMMSPP
Sbjct: 421 PIIGEIRGTGLILGTEFTDNKSPNDPFPAEWGVGAYFGAQCEKHGMLIRVAGDNIMMSPP 480

Query: 482 FIMSPEEVDELISKYGKALKATEERVKELKSQQ 514
           FIM+P EVDELIS YGKALK TEE VKELKS+Q
Sbjct: 481 FIMTPSEVDELISLYGKALKDTEEYVKELKSKQ 513

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|405780098|gb|AFS28620.1| gamma-aminobutyrate transaminase 1 [Malus x domestica]

 Score =  900 bits (2325), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/513 (83%), Positives = 471/513 (91%), Gaps = 4/513 (0%)

Query: 6   MVTSKLLQSSLKSQIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKEDSTTN---- 61
           M  ++  +S+L++Q+ S TK+ +AS+S  +++  +P LAR Y T +  ++E+ST      
Sbjct: 1   MGINRFFRSNLRTQLVSCTKYAAASRSPLDHVLLVPFLARSYSTGSPLRREESTAEEKGL 60

Query: 62  GFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRL 121
           GFKGHDMLAPFTAGWQSTD+HPL+IEKSEG YVYD NGKKYLD+LAGLWCTALGG+EPRL
Sbjct: 61  GFKGHDMLAPFTAGWQSTDLHPLIIEKSEGCYVYDSNGKKYLDALAGLWCTALGGNEPRL 120

Query: 122 VAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKL 181
           VAAAT QLNTLPFYHSFWNRTTKPSLDLAKELLE FTASKMAK FFTNSGSEANDTQVKL
Sbjct: 121 VAAATKQLNTLPFYHSFWNRTTKPSLDLAKELLETFTASKMAKAFFTNSGSEANDTQVKL 180

Query: 182 VWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 241
           VWYYNNALGRP+KKKFIAR KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR
Sbjct: 181 VWYYNNALGRPDKKKFIARHKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR 240

Query: 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV 301
           +  PGETEEEYSTRLANNLE+LILKEGPETIAAFIAEPV+GAGGVIPPPATYFEKVQAVV
Sbjct: 241 HHLPGETEEEYSTRLANNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKVQAVV 300

Query: 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEV 361
           KKYDILFIADEVICAFGRLG M+GCDKY+IKPDLVS AKALSSAYMPIGA+LVSPEVS+V
Sbjct: 301 KKYDILFIADEVICAFGRLGYMYGCDKYNIKPDLVSVAKALSSAYMPIGAVLVSPEVSDV 360

Query: 362 IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS 421
           IHSQS+ LGSFSHGFTYSGHPV+CAVAIEALKIYKERNIVEQV  IAP+FQ+GVKAFSDS
Sbjct: 361 IHSQSSELGSFSHGFTYSGHPVACAVAIEALKIYKERNIVEQVRSIAPRFQEGVKAFSDS 420

Query: 422 PIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPP 481
           PIIGEIRGTGLI+GTEFADNKSPN+PFP EWG+ AYFGAQCEKHGMLVRV+GDN MMSPP
Sbjct: 421 PIIGEIRGTGLIIGTEFADNKSPNDPFPAEWGVCAYFGAQCEKHGMLVRVAGDNTMMSPP 480

Query: 482 FIMSPEEVDELISKYGKALKATEERVKELKSQQ 514
           FIM+P EV+ELIS YGKALKATEE VKELKS+Q
Sbjct: 481 FIMTPSEVEELISIYGKALKATEEYVKELKSKQ 513

Source: Malus x domestica

Species: Malus x domestica

Genus: Malus

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460004|ref|XP_004147736.1| PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial-like [Cucumis sativus]

 Score =  894 bits (2311), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/510 (81%), Positives = 471/510 (92%), Gaps = 4/510 (0%)

Query: 6   MVTSKLLQSSLKSQIGSFTKH-FSASKSLSENLYQIPLLARFYGTDASSQKEDSTTNGFK 64
           M  ++LL+S+L+SQ+G+F K   S+ ++  E+    P L+R + T AS+QKEDS   GFK
Sbjct: 1   MAINQLLRSTLRSQLGTFAKTVISSGRASQEHAILAPFLSRLHSTQASAQKEDS---GFK 57

Query: 65  GHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAA 124
           GHDMLAPFTAGWQ+TDV+PL+IE+SEGSYVYD++G+KYLDSLAGLWCT+LGG+E RLVAA
Sbjct: 58  GHDMLAPFTAGWQTTDVNPLIIERSEGSYVYDIDGRKYLDSLAGLWCTSLGGNESRLVAA 117

Query: 125 ATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWY 184
           A  QLNTLPFYHSFWNRTT+PSLDLAK+LLEMFTA KM KVFF NSGSEANDTQVKLVWY
Sbjct: 118 AMKQLNTLPFYHSFWNRTTRPSLDLAKDLLEMFTARKMGKVFFVNSGSEANDTQVKLVWY 177

Query: 185 YNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAH 244
           YNNALGRP+KKKFIAR KSYHGSTLI+ASL+GLPALHQKFD+PAPFVLHTDCPHYWR+  
Sbjct: 178 YNNALGRPDKKKFIARSKSYHGSTLISASLTGLPALHQKFDIPAPFVLHTDCPHYWRFHL 237

Query: 245 PGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY 304
           PGETEEE+STRLA NLEDLI+KEGPETIAAFIAEPV+GAGGVIPPPATYFEK+QAVVKKY
Sbjct: 238 PGETEEEFSTRLAKNLEDLIIKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVVKKY 297

Query: 305 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHS 364
           DILFIADEVICAFGRLGTMFGCDKY+IKPDLVS AKALSS YMPIGA++VSPE+S+VIHS
Sbjct: 298 DILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSGYMPIGAVIVSPEISDVIHS 357

Query: 365 QSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPII 424
           QSN LGSFSHGFTYSGHPV+CAVAIE LKIYKERNIVE+VN I+ +FQDG+KAFSDSPI+
Sbjct: 358 QSNKLGSFSHGFTYSGHPVACAVAIETLKIYKERNIVEKVNSISSRFQDGLKAFSDSPIV 417

Query: 425 GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIM 484
           GEIRGTGLILGTEF DNKSPN+PFPPEWG+GAYFGA+C+K+GMLVRVSGD IMMSPPFI+
Sbjct: 418 GEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFII 477

Query: 485 SPEEVDELISKYGKALKATEERVKELKSQQ 514
           SP+EVDELIS YGKALKATEERVKELK+Q+
Sbjct: 478 SPQEVDELISIYGKALKATEERVKELKAQR 507

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225464809|ref|XP_002268803.1| PREDICTED: uncharacterized aminotransferase y4uB-like [Vitis vinifera]

 Score =  892 bits (2304), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/515 (81%), Positives = 471/515 (91%), Gaps = 6/515 (1%)

Query: 6   MVTSKLLQSSLK-SQIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKEDSTT---- 60
           M+   L++S+L+ +Q  S+  H +A++SL E+L + P+LAR+  T+AS Q+ED+ T    
Sbjct: 1   MIFRNLVRSTLRNTQAVSYKNHVAAARSLQEHLVRAPVLARWNSTEASMQREDAETELKN 60

Query: 61  -NGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEP 119
              FKGHDMLAPFTAGWQ++D +PLVIEKS+G+YV+D+NGKKYLDSLAGLWCTALGGSEP
Sbjct: 61  AKEFKGHDMLAPFTAGWQASDTNPLVIEKSKGAYVWDINGKKYLDSLAGLWCTALGGSEP 120

Query: 120 RLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 179
           RLVAAA AQLNTLPFYHSFWNRTTKPSLDLAKELL  FTA+KM K FFTNSGSEANDTQV
Sbjct: 121 RLVAAAIAQLNTLPFYHSFWNRTTKPSLDLAKELLNTFTATKMGKAFFTNSGSEANDTQV 180

Query: 180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 239
           KLVWYYNNALGRPNKKKFIAR+KSYHGSTLI+ASLSGLPALHQKFDLPAPFVLHTDCPHY
Sbjct: 181 KLVWYYNNALGRPNKKKFIAREKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHY 240

Query: 240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA 299
           WRY  PGE+EEE+STRLANNLE+LILKEGPETIAAFIAEPV+GAGGVIPPPATYF+K+Q 
Sbjct: 241 WRYHLPGESEEEFSTRLANNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFDKIQP 300

Query: 300 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVS 359
           ++KKYDILFIADEVICAFGRLGTMFGCDKY +KPDLVS AKALSSAYMPIGA+LVSPE+S
Sbjct: 301 ILKKYDILFIADEVICAFGRLGTMFGCDKYGMKPDLVSMAKALSSAYMPIGAVLVSPEIS 360

Query: 360 EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS 419
           +VI SQSN LG FSHGFTYSGHPVSCAVA+EALKIYKERNI E V +I+PKFQ+G+KAFS
Sbjct: 361 DVIDSQSNKLGVFSHGFTYSGHPVSCAVALEALKIYKERNIAEVVQRISPKFQNGLKAFS 420

Query: 420 DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMS 479
           DSPIIGEIRGTGLILGTEF DNKSPN+ FPPEWGIGAYFGAQC+KHGMLVRV+GD+IMMS
Sbjct: 421 DSPIIGEIRGTGLILGTEFTDNKSPNDVFPPEWGIGAYFGAQCQKHGMLVRVAGDSIMMS 480

Query: 480 PPFIMSPEEVDELISKYGKALKATEERVKELKSQQ 514
           PPFI++PEEVDELIS YGKALKATEERVKELKS Q
Sbjct: 481 PPFIITPEEVDELISIYGKALKATEERVKELKSLQ 515

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449528047|ref|XP_004171018.1| PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial-like, partial [Cucumis sativus]

 Score =  891 bits (2303), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/507 (82%), Positives = 468/507 (92%), Gaps = 4/507 (0%)

Query: 6   MVTSKLLQSSLKSQIGSFTKH-FSASKSLSENLYQIPLLARFYGTDASSQKEDSTTNGFK 64
           M  ++LL+S+L+SQ+G+F K   S+ ++  E+    P L+R + T AS+QKEDS   GFK
Sbjct: 1   MAINQLLRSTLRSQLGTFAKTVISSGRASQEHAILAPFLSRLHSTQASAQKEDS---GFK 57

Query: 65  GHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAA 124
           GHDMLAPFTAGWQ+TDV+PL+IE+SEGSYVYD++G+KYLDSLAGLWCT+LGG+E RLVAA
Sbjct: 58  GHDMLAPFTAGWQTTDVNPLIIERSEGSYVYDIDGRKYLDSLAGLWCTSLGGNESRLVAA 117

Query: 125 ATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWY 184
           A  QLNTLPFYHSFWNRTT+PSLDLAK+LLEMFTA KM KVFF NSGSEANDTQVKLVWY
Sbjct: 118 AMKQLNTLPFYHSFWNRTTRPSLDLAKDLLEMFTARKMGKVFFVNSGSEANDTQVKLVWY 177

Query: 185 YNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAH 244
           YNNALGRP+KKKFIAR KSYHGSTLI+ASL+GLPALHQKFD+PAPFVLHTDCPHYWR+  
Sbjct: 178 YNNALGRPDKKKFIARSKSYHGSTLISASLTGLPALHQKFDIPAPFVLHTDCPHYWRFHL 237

Query: 245 PGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY 304
           PGETEEE+STRLA NLEDLI+KEGPETIAAFIAEPV+GAGGVIPPPATYFEK+QAVVKKY
Sbjct: 238 PGETEEEFSTRLAKNLEDLIIKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVVKKY 297

Query: 305 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHS 364
           DILFIADEVICAFGRLGTMFGCDKY+IKPDLVS AKALSS YMPIGA++VSPE+S+VIHS
Sbjct: 298 DILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSGYMPIGAVIVSPEISDVIHS 357

Query: 365 QSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPII 424
           QSN LGSFSHGFTYSGHPV+CAVAIE LKIYKERNIVE+VN I+ +FQDG+KAFSDSPI+
Sbjct: 358 QSNKLGSFSHGFTYSGHPVACAVAIETLKIYKERNIVEKVNSISSRFQDGLKAFSDSPIV 417

Query: 425 GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIM 484
           GEIRGTGLILGTEF DNKSPN+PFPPEWG+GAYFGA+C+K+GMLVRVSGD IMMSPPFI+
Sbjct: 418 GEIRGTGLILGTEFVDNKSPNDPFPPEWGVGAYFGAECQKNGMLVRVSGDTIMMSPPFII 477

Query: 485 SPEEVDELISKYGKALKATEERVKELK 511
           SP+EVDELIS YGKALKATEERVKELK
Sbjct: 478 SPQEVDELISIYGKALKATEERVKELK 504

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356538512|ref|XP_003537747.1| PREDICTED: uncharacterized aminotransferase y4uB-like [Glycine max]

 Score =  891 bits (2302), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/509 (82%), Positives = 463/509 (90%), Gaps = 5/509 (0%)

Query: 11  LLQSSLKSQIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKEDSTTN-----GFKG 65
           LL+S+L+++  S   +   S+S  ENL Q PLL+R   T+AS  K++S+ +     G+KG
Sbjct: 4   LLRSTLRTKTASSLAYAVVSRSAHENLLQAPLLSRSNSTEASLAKDNSSNDVKNGQGYKG 63

Query: 66  HDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAA 125
           H MLAPFTAGWQS+D+HPL+IEKSEGSYVYD+NGKKYLD+LAGLW T+LGGSEPRLV AA
Sbjct: 64  HSMLAPFTAGWQSSDLHPLIIEKSEGSYVYDINGKKYLDALAGLWATSLGGSEPRLVDAA 123

Query: 126 TAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYY 185
            AQL  LPFYHSFWNRTT PSLDLAKELLEMFTA KM K FF NSGSEANDTQVKLVWYY
Sbjct: 124 VAQLKKLPFYHSFWNRTTLPSLDLAKELLEMFTARKMGKAFFVNSGSEANDTQVKLVWYY 183

Query: 186 NNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHP 245
           NNALGRP+KKKFIAR KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRY  P
Sbjct: 184 NNALGRPDKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYHLP 243

Query: 246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 305
           GETEEE+STRLANNLE LILKEGPETIAAFIAEPV+GAGGVIPPP+TYFEKVQAVVKKYD
Sbjct: 244 GETEEEFSTRLANNLEQLILKEGPETIAAFIAEPVMGAGGVIPPPSTYFEKVQAVVKKYD 303

Query: 306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQ 365
           ILFIADEVICAFGRLGTMFGCDKY+IKPDLVS AKALSSAY+PIGA+LVSPE+SEVIH Q
Sbjct: 304 ILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYLPIGAVLVSPEISEVIHDQ 363

Query: 366 SNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIG 425
           SN LGSFSHGFTYSGHP +CAVAIEALKIYKERNIV+QVNKIAP+FQDG+KAFSDSPIIG
Sbjct: 364 SNKLGSFSHGFTYSGHPAACAVAIEALKIYKERNIVDQVNKIAPRFQDGIKAFSDSPIIG 423

Query: 426 EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMS 485
           EIRGTGLILGTEF DNKSPN+PFPPEWGIGAYFGAQCEKHGMLVRV+GDNIMMSPP+I+S
Sbjct: 424 EIRGTGLILGTEFTDNKSPNDPFPPEWGIGAYFGAQCEKHGMLVRVAGDNIMMSPPYIIS 483

Query: 486 PEEVDELISKYGKALKATEERVKELKSQQ 514
           P EV+ELIS YGKALK TE++V+ELKSQ+
Sbjct: 484 PGEVEELISIYGKALKETEKKVQELKSQR 512

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296087517|emb|CBI34106.3| unnamed protein product [Vitis vinifera]

 Score =  884 bits (2285), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/521 (80%), Positives = 471/521 (90%), Gaps = 12/521 (2%)

Query: 6   MVTSKLLQSSLK-SQIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKEDSTT---- 60
           M+   L++S+L+ +Q  S+  H +A++SL E+L + P+LAR+  T+AS Q+ED+ T    
Sbjct: 1   MIFRNLVRSTLRNTQAVSYKNHVAAARSLQEHLVRAPVLARWNSTEASMQREDAETELKN 60

Query: 61  -NGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEP 119
              FKGHDMLAPFTAGWQ++D +PLVIEKS+G+YV+D+NGKKYLDSLAGLWCTALGGSEP
Sbjct: 61  AKEFKGHDMLAPFTAGWQASDTNPLVIEKSKGAYVWDINGKKYLDSLAGLWCTALGGSEP 120

Query: 120 RLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV 179
           RLVAAA AQLNTLPFYHSFWNRTTKPSLDLAKELL  FTA+KM K FFTNSGSEANDTQV
Sbjct: 121 RLVAAAIAQLNTLPFYHSFWNRTTKPSLDLAKELLNTFTATKMGKAFFTNSGSEANDTQV 180

Query: 180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY 239
           KLVWYYNNALGRPNKKKFIAR+KSYHGSTLI+ASLSGLPALHQKFDLPAPFVLHTDCPHY
Sbjct: 181 KLVWYYNNALGRPNKKKFIAREKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHY 240

Query: 240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA 299
           WRY  PGE+EEE+STRLANNLE+LILKEGPETIAAFIAEPV+GAGGVIPPPATYF+K+Q 
Sbjct: 241 WRYHLPGESEEEFSTRLANNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFDKIQP 300

Query: 300 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVS 359
           ++KKYDILFIADEVICAFGRLGTMFGCDKY +KPDLVS AKALSSAYMPIGA+LVSPE+S
Sbjct: 301 ILKKYDILFIADEVICAFGRLGTMFGCDKYGMKPDLVSMAKALSSAYMPIGAVLVSPEIS 360

Query: 360 EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS 419
           +VI SQSN LG FSHGFTYSGHPVSCAVA+EALKIYKERNI E V +I+PKFQ+G+KAFS
Sbjct: 361 DVIDSQSNKLGVFSHGFTYSGHPVSCAVALEALKIYKERNIAEVVQRISPKFQNGLKAFS 420

Query: 420 DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWG------IGAYFGAQCEKHGMLVRVSG 473
           DSPIIGEIRGTGLILGTEF DNKSPN+ FPPEWG      IGAYFGAQC+KHGMLVRV+G
Sbjct: 421 DSPIIGEIRGTGLILGTEFTDNKSPNDVFPPEWGNLLPNSIGAYFGAQCQKHGMLVRVAG 480

Query: 474 DNIMMSPPFIMSPEEVDELISKYGKALKATEERVKELKSQQ 514
           D+IMMSPPFI++PEEVDELIS YGKALKATEERVKELKS Q
Sbjct: 481 DSIMMSPPFIITPEEVDELISIYGKALKATEERVKELKSLQ 521

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255560072|ref|XP_002521054.1| aminobutyrate aminotransferase, putative [Ricinus communis] gi|223539757|gb|EEF41338.1| aminobutyrate aminotransferase, putative [Ricinus communis]

 Score =  882 bits (2279), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/517 (81%), Positives = 461/517 (89%), Gaps = 16/517 (3%)

Query: 14  SSLKSQIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKE---------------DS 58
           S +  ++GS  KH +AS +  ++L+Q   L R Y ++   Q+E               D+
Sbjct: 9   SRIGFELGSCVKHANASGTSQKHLFQTASLTRLYSSEGFVQRESDNGGSSILRPATVADN 68

Query: 59  TTN-GFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGS 117
             N  +KGHDMLAPFTAGWQSTD+ PLVIEKSEGSYVYD+NG KYLDSLAGLWCTALGG+
Sbjct: 69  FDNCSYKGHDMLAPFTAGWQSTDLDPLVIEKSEGSYVYDINGNKYLDSLAGLWCTALGGN 128

Query: 118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT 177
           EPRLVAAAT QLN LPFYHSFWNRTTKPSLDLAKELLE FTA KMAK FFTNSGSEANDT
Sbjct: 129 EPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLETFTARKMAKAFFTNSGSEANDT 188

Query: 178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP 237
           QVKLVWYYNNALGRPNKKKFIAR KSYHGSTLI+ASLSGLPALHQKFDLPAPFVLHTDCP
Sbjct: 189 QVKLVWYYNNALGRPNKKKFIARAKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCP 248

Query: 238 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKV 297
           HYWRY  PGETEEE+STRL+NNLE+LI KEGPETIAAFIAEPV+GAGGVIPPPATYFEKV
Sbjct: 249 HYWRYHLPGETEEEFSTRLSNNLENLIQKEGPETIAAFIAEPVMGAGGVIPPPATYFEKV 308

Query: 298 QAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPE 357
           QAVV+KYDILFIADEVICAFGRLGTMFGCDKY+IKPDLVS AKALSSAYMPIGA++VSPE
Sbjct: 309 QAVVQKYDILFIADEVICAFGRLGTMFGCDKYNIKPDLVSVAKALSSAYMPIGAVMVSPE 368

Query: 358 VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA 417
           VS+VIHSQSN LG FSHGFTYSGHPVSCAVAIEALKIYKERNI E+VN++AP+FQDG+KA
Sbjct: 369 VSDVIHSQSNKLGIFSHGFTYSGHPVSCAVAIEALKIYKERNIAERVNEVAPRFQDGLKA 428

Query: 418 FSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM 477
           FSDSP+IGEIRGTGLILGTEFADNKSPN+PFP EWGIGAYFGAQC+KHGMLVRV+GDNIM
Sbjct: 429 FSDSPVIGEIRGTGLILGTEFADNKSPNDPFPAEWGIGAYFGAQCQKHGMLVRVAGDNIM 488

Query: 478 MSPPFIMSPEEVDELISKYGKALKATEERVKELKSQQ 514
           MSPP I++PEEVD+LIS YGKALKATEERV ELKSQQ
Sbjct: 489 MSPPLIITPEEVDKLISIYGKALKATEERVNELKSQQ 525

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544361|ref|XP_003540621.1| PREDICTED: uncharacterized aminotransferase y4uB-like [Glycine max]

 Score =  875 bits (2260), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/492 (84%), Positives = 450/492 (91%), Gaps = 5/492 (1%)

Query: 28  SASKSLSENLYQIPLLARFYGTDASSQKEDSTTN-----GFKGHDMLAPFTAGWQSTDVH 82
           + S+S  ENL Q PLL+R   T+AS  K+ S+ +     GFKGH MLAPFTAGWQ+TD+H
Sbjct: 25  AVSRSAQENLLQAPLLSRSNSTEASLAKDTSSNDVKNGQGFKGHSMLAPFTAGWQTTDLH 84

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           PLVIEKSEGSYVYD+NGKKYLD+LAGLW T+LGGSEPRLV AA AQL  LPFYHSFWNRT
Sbjct: 85  PLVIEKSEGSYVYDINGKKYLDALAGLWATSLGGSEPRLVDAAIAQLKKLPFYHSFWNRT 144

Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
           T PSLDLAKELLEMFTA KM K FF NSGSEANDTQVKLVWYYNNALGRP+KKKFIAR K
Sbjct: 145 TLPSLDLAKELLEMFTARKMGKAFFVNSGSEANDTQVKLVWYYNNALGRPDKKKFIARAK 204

Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 262
           SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRY  PGETEEE+STRLA NLE 
Sbjct: 205 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYHLPGETEEEFSTRLAKNLEQ 264

Query: 263 LILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 322
           LILKEGPETIAAFIAEPV+GAGGVI PP+TYFEKVQAVVKKYDILFIADEVICAFGRLGT
Sbjct: 265 LILKEGPETIAAFIAEPVMGAGGVIVPPSTYFEKVQAVVKKYDILFIADEVICAFGRLGT 324

Query: 323 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382
           MFGCDKY+IKPDLVS AKALSSAY+PIGA+LVSPE+S+VIH+QSN LGSFSHGFTYSGHP
Sbjct: 325 MFGCDKYNIKPDLVSLAKALSSAYLPIGAVLVSPEISDVIHAQSNKLGSFSHGFTYSGHP 384

Query: 383 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNK 442
            +CAVAIEALKIYKERNIV+QVNKIAP+FQDG+KAFSDSPIIGEIRGTGLILGTEF DNK
Sbjct: 385 AACAVAIEALKIYKERNIVDQVNKIAPRFQDGIKAFSDSPIIGEIRGTGLILGTEFTDNK 444

Query: 443 SPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA 502
           SPN+PFPPEWG+GAYFGAQCEKHGMLVRV+GDNIMMSPP+I+S  EVDELIS YGKALK 
Sbjct: 445 SPNDPFPPEWGVGAYFGAQCEKHGMLVRVAGDNIMMSPPYIISQGEVDELISIYGKALKE 504

Query: 503 TEERVKELKSQQ 514
           TE++V+ELKSQ+
Sbjct: 505 TEKKVQELKSQR 516

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
B7GHM5	BIOA_ANOFW	2, ., 6, ., 1, ., 6, 2	0.3089	0.8365	0.9471	yes	no
Q7XN12	GATP2_ORYSJ	2, ., 6, ., 1, ., -	0.7605	0.9163	0.9476	no	no
Q7XN11	GATP1_ORYSJ	2, ., 6, ., 1, ., -	0.8276	0.9143	0.9108	no	no
Q84P54	GATP1_SOLLC	2, ., 6, ., 1, ., -	0.7810	0.9980	0.9961	N/A	no
Q84P52	GATP3_SOLLC	2, ., 6, ., 1, ., -	0.8056	0.9669	0.9557	N/A	no
Q84P53	GATP2_SOLLC	2, ., 6, ., 1, ., -	0.7789	0.8871	0.9956	N/A	no
Q94CE5	GATP_ARATH	2, ., 6, ., 1, ., -	0.8365	0.9105	0.9285	yes	no
O94562	YGD3_SCHPO	2, ., 6, ., -, ., -	0.3257	0.8229	0.9215	yes	no
B8BBZ7	GATP3_ORYSI	2, ., 6, ., 1, ., -	0.7757	0.9766	0.9843	N/A	no
Q2FVJ6	BIOA_STAA8	2, ., 6, ., 1, ., 6, 2	0.3113	0.8346	0.9491	yes	no
Q6ZCF0	GATP3_ORYSJ	2, ., 6, ., 1, ., -	0.7698	0.9766	0.9843	yes	no
Q6ZH29	GATP4_ORYSJ	2, ., 6, ., 1, ., -	0.7259	0.9066	0.9648	no	no
Q01K12	GATP2_ORYSI	2, ., 6, ., 1, ., -	0.7605	0.9163	0.9476	N/A	no
Q01K11	GATP1_ORYSI	2, ., 6, ., 1, ., -	0.8255	0.9143	0.9108	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.6.1	LOW CONFIDENCE prediction!
4th Layer	2.6.1.44	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	514
PLN02760	504	PLN02760, PLN02760, 4-aminobutyrate:pyruvate trans	0.0
PRK06105	460	PRK06105, PRK06105, aminotransferase; Provisional	0.0
COG0161	449	COG0161, BioA, Adenosylmethionine-8-amino-7-oxonon	0.0
PRK07480	456	PRK07480, PRK07480, putative aminotransferase; Val	1e-179
PRK07482	461	PRK07482, PRK07482, hypothetical protein; Provisio	1e-171
cd00610	413	cd00610, OAT_like, Acetyl ornithine aminotransfera	1e-146
PRK07036	466	PRK07036, PRK07036, hypothetical protein; Provisio	1e-142
PRK07481	449	PRK07481, PRK07481, hypothetical protein; Provisio	1e-127
PRK06541	460	PRK06541, PRK06541, hypothetical protein; Provisio	1e-117
PRK09221	445	PRK09221, PRK09221, beta alanine--pyruvate transam	1e-116
PRK12403	460	PRK12403, PRK12403, putative aminotransferase; Pro	1e-113
PRK07483	443	PRK07483, PRK07483, hypothetical protein; Provisio	1e-111
COG0160	447	COG0160, GabT, 4-aminobutyrate aminotransferase an	1e-107
PRK05965	459	PRK05965, PRK05965, hypothetical protein; Provisio	1e-106
TIGR00508	417	TIGR00508, bioA, adenosylmethionine-8-amino-7-oxon	1e-106
pfam00202	338	pfam00202, Aminotran_3, Aminotransferase class-III	1e-103
PRK07678	451	PRK07678, PRK07678, aminotransferase; Validated	1e-102
PRK13360	442	PRK13360, PRK13360, omega amino acid--pyruvate tra	1e-100
PRK06917	447	PRK06917, PRK06917, hypothetical protein; Provisio	1e-99
COG4992	404	COG4992, ArgD, Ornithine/acetylornithine aminotran	1e-96
PRK06916	460	PRK06916, PRK06916, adenosylmethionine--8-amino-7-	5e-94
PRK06062	451	PRK06062, PRK06062, hypothetical protein; Provisio	1e-93
PRK02627	396	PRK02627, PRK02627, acetylornithine aminotransfera	2e-93
PRK05769	441	PRK05769, PRK05769, 4-aminobutyrate aminotransfera	3e-82
TIGR00707	379	TIGR00707, argD, transaminase, acetylornithine/suc	1e-80
PTZ00125	400	PTZ00125, PTZ00125, ornithine aminotransferase-lik	1e-77
PRK07030	466	PRK07030, PRK07030, adenosylmethionine--8-amino-7-	5e-77
PRK05964	423	PRK05964, PRK05964, adenosylmethionine--8-amino-7-	1e-74
PRK08117	433	PRK08117, PRK08117, 4-aminobutyrate aminotransfera	1e-72
TIGR01885	401	TIGR01885, Orn_aminotrans, ornithine aminotransfer	1e-68
PRK03244	398	PRK03244, argD, acetylornithine aminotransferase;	9e-68
PRK01278	389	PRK01278, argD, acetylornithine transaminase prote	2e-64
PRK08742	472	PRK08742, PRK08742, adenosylmethionine--8-amino-7-	4e-62
PRK08360	443	PRK08360, PRK08360, 4-aminobutyrate aminotransfera	3e-61
PRK11522	459	PRK11522, PRK11522, putrescine--2-oxoglutarate ami	5e-60
PRK02936	377	PRK02936, argD, acetylornithine aminotransferase;	3e-59
PRK05093	403	PRK05093, argD, bifunctional N-succinyldiaminopime	1e-58
TIGR03246	397	TIGR03246, arg_catab_astC, succinylornithine trans	5e-57
PRK08593	445	PRK08593, PRK08593, 4-aminobutyrate aminotransfera	5e-56
PRK06943	453	PRK06943, PRK06943, adenosylmethionine--8-amino-7-	8e-55
PLN02624	474	PLN02624, PLN02624, ornithine-delta-aminotransfera	3e-54
PRK04612	408	PRK04612, argD, acetylornithine transaminase prote	3e-54
PRK05630	422	PRK05630, PRK05630, adenosylmethionine--8-amino-7-	5e-54
PRK04073	396	PRK04073, rocD, ornithine--oxo-acid transaminase;	1e-52
PRK12381	406	PRK12381, PRK12381, bifunctional succinylornithine	2e-51
PLN00144	382	PLN00144, PLN00144, acetylornithine transaminase	1e-50
TIGR00700	420	TIGR00700, GABAtrnsam, 4-aminobutyrate aminotransf	3e-50
PRK06082	459	PRK06082, PRK06082, 4-aminobutyrate aminotransfera	1e-49
PRK06173	429	PRK06173, PRK06173, adenosylmethionine--8-amino-7-	2e-49
PRK00854	401	PRK00854, rocD, ornithine--oxo-acid transaminase;	3e-49
COG0001	432	COG0001, HemL, Glutamate-1-semialdehyde aminotrans	5e-49
PRK07986	428	PRK07986, PRK07986, adenosylmethionine--8-amino-7-	8e-47
TIGR03372	442	TIGR03372, putres_am_tran, putrescine aminotransfe	3e-46
PRK06918	451	PRK06918, PRK06918, 4-aminobutyrate aminotransfera	3e-46
TIGR00709	442	TIGR00709, dat, 2,4-diaminobutyrate 4-transaminase	2e-45
PRK06149	972	PRK06149, PRK06149, hypothetical protein; Provisio	1e-42
PRK06931	459	PRK06931, PRK06931, diaminobutyrate--2-oxoglutarat	2e-42
PRK08088	425	PRK08088, PRK08088, 4-aminobutyrate aminotransfera	3e-42
PRK03715	395	PRK03715, argD, acetylornithine transaminase prote	2e-41
PRK04260	375	PRK04260, PRK04260, acetylornithine aminotransfera	3e-41
PRK06938	464	PRK06938, PRK06938, diaminobutyrate--2-oxoglutarat	9e-41
PRK06058	443	PRK06058, PRK06058, 4-aminobutyrate aminotransfera	2e-40
PRK05639	457	PRK05639, PRK05639, 4-aminobutyrate aminotransfera	7e-40
PRK07495	425	PRK07495, PRK07495, 4-aminobutyrate aminotransfera	1e-37
TIGR00713	423	TIGR00713, hemL, glutamate-1-semialdehyde-2,1-amin	5e-37
PRK06148	1013	PRK06148, PRK06148, hypothetical protein; Provisio	6e-37
PRK06777	421	PRK06777, PRK06777, 4-aminobutyrate aminotransfera	5e-36
PRK00062	426	PRK00062, PRK00062, glutamate-1-semialdehyde amino	8e-32
TIGR02407	412	TIGR02407, ectoine_ectB, diaminobutyrate--2-oxoglu	5e-30
PRK04013	364	PRK04013, argD, acetylornithine/acetyl-lysine amin	7e-30
PRK09792	421	PRK09792, PRK09792, 4-aminobutyrate transaminase;	1e-29
PRK12389	428	PRK12389, PRK12389, glutamate-1-semialdehyde amino	3e-25
PRK09264	425	PRK09264, PRK09264, diaminobutyrate--2-oxoglutarat	2e-23
PRK08297	443	PRK08297, PRK08297, L-lysine aminotransferase; Pro	2e-23
PRK06209	431	PRK06209, PRK06209, glutamate-1-semialdehyde 2,1-a	3e-23
TIGR03251	431	TIGR03251, LAT_fam, L-lysine 6-transaminase	3e-20
PLN02482	474	PLN02482, PLN02482, glutamate-1-semialdehyde 2,1-a	4e-20
PLN02974	817	PLN02974, PLN02974, adenosylmethionine-8-amino-7-o	1e-19
TIGR00699	464	TIGR00699, GABAtrns_euk, 4-aminobutyrate aminotran	1e-18
PRK00615	433	PRK00615, PRK00615, glutamate-1-semialdehyde amino	2e-15
PRK07046	453	PRK07046, PRK07046, aminotransferase; Validated	2e-06
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	2e-04
cd01494	170	cd01494, AAT_I, Aspartate aminotransferase (AAT) s	6e-04

>gnl|CDD|215405 PLN02760, PLN02760, 4-aminobutyrate:pyruvate transaminase

 Score = 1027 bits (2657), Expect = 0.0
 Identities = 430/509 (84%), Positives = 467/509 (91%), Gaps = 6/509 (1%)

Query: 6   MVTSKLLQSSLKSQIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKEDSTTNGFKG 65
           M+   LL+SS +S   +  KH++A+ SL+      P  AR + T+AS QKEDS  NGFKG
Sbjct: 1   MIARNLLRSSARSTQVNLLKHYAATASLA------PASARIFSTEASLQKEDSEENGFKG 54

Query: 66  HDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAA 125
           HDMLAPFTAGWQSTD+ PLVIEKSEGSYVYD+NGKKYLD+LAGLWCTALGGSEPRLVAAA
Sbjct: 55  HDMLAPFTAGWQSTDLEPLVIEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAA 114

Query: 126 TAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYY 185
           T QLN LPFYHSFWNRTTKPSLDLAKELLEMFTA KM KVFFTNSGSEANDTQVKLVWYY
Sbjct: 115 TEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLVWYY 174

Query: 186 NNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHP 245
           NNALGRPNKKKFIAR KSYHGSTLI+ASLSGLPALHQKFDLPAPFVLHTDCPHYWR+  P
Sbjct: 175 NNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLP 234

Query: 246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 305
           GETEEE+STRLA+NLE+LILKEGPETIAAFIAEPV+GAGGVIPPPATYFEK+QAV+KKYD
Sbjct: 235 GETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYD 294

Query: 306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQ 365
           ILFIADEVICAFGRLGTMFGCDKY+IKPDLVS AKALSSAYMPIGA+LVSPE+S+VIHSQ
Sbjct: 295 ILFIADEVICAFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQ 354

Query: 366 SNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIG 425
           SN LGSF+HGFTYSGHPVSCAVA+EALKIYKERNI E VNKIAP+FQDG+KAFS SPIIG
Sbjct: 355 SNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAFSGSPIIG 414

Query: 426 EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMS 485
           EIRGTGLILGTEF DNKSPN+PFP EWG+GAYFGA+C+K GMLVRV+GDNIMMSPP I++
Sbjct: 415 EIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAGDNIMMSPPLIIT 474

Query: 486 PEEVDELISKYGKALKATEERVKELKSQQ 514
           PEEVDELIS YGKALKATEERV ELKSQ+
Sbjct: 475 PEEVDELISIYGKALKATEERVAELKSQK 503

Length = 504

>gnl|CDD|180401 PRK06105, PRK06105, aminotransferase; Provisional

 Score =  660 bits (1704), Expect = 0.0
 Identities = 232/441 (52%), Positives = 312/441 (70%), Gaps = 1/441 (0%)

Query: 69  LAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ 128
           L P+T   +  +  PLVIE+ EG YVYD  GK+Y++ +AGLW  ALG SE RLV AA  Q
Sbjct: 17  LHPYTNARRHEEEGPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQ 76

Query: 129 LNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA 188
           +  LPFYH+F +++  P +DLA++L+ M     M+KVFFTNSGSEANDT VKLVWYYNNA
Sbjct: 77  MKKLPFYHTFSHKSHGPVIDLAEKLVAM-APVPMSKVFFTNSGSEANDTVVKLVWYYNNA 135

Query: 189 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET 248
           LGRP KKK I+RQ+ YHG T+ +ASL+GLP  H+ FDLP   +LHT CPHY+R+  PGE+
Sbjct: 136 LGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGES 195

Query: 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILF 308
           EE ++TRLAN LE LIL EGP+TIAAFI EPV+GAGGVI PP TY+EK+QAV++KYDIL 
Sbjct: 196 EEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILL 255

Query: 309 IADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT 368
           +ADEVIC FGR G MFGC+ + IKPD++  +K LSS+Y P+ A+L++ +V + I  +S  
Sbjct: 256 VADEVICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGK 315

Query: 369 LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR 428
           +G+F HGFT SGHPV+ AVA+E L I +ER++V    +   + Q  ++A +D P++GE+R
Sbjct: 316 IGTFGHGFTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRALADHPLVGEVR 375

Query: 429 GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEE 488
           G GLI   E   +K+   PF P   +GA   A   +HG++ R  GD +   PP I++  +
Sbjct: 376 GVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAMGDTLAFCPPLIITAAQ 435

Query: 489 VDELISKYGKALKATEERVKE 509
           VDE++ ++G+AL      V  
Sbjct: 436 VDEMVDRFGRALDDVAAWVAA 456

Length = 460

>gnl|CDD|223239 COG0161, BioA, Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

 Score =  535 bits (1380), Expect = 0.0
 Identities = 183/443 (41%), Positives = 264/443 (59%), Gaps = 14/443 (3%)

Query: 71  PFTAGWQSTD--VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ 128
           PFT   Q  D    P VI ++EG Y+ D++G++YLD ++GLWC   G   P +  A   Q
Sbjct: 16  PFT---QMRDPLAEPRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQ 72

Query: 129 LNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA 188
           L+ LP    F   T +P+++LA++L E+     +  VFFT+SGSEA +T +K+   Y  A
Sbjct: 73  LDKLPHVM-FGGFTHEPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRA 131

Query: 189 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK-FDLPAPFVLHTDCPHYWRYAHPGE 247
            G+P +KKFI+R+  YHG TL A S+ G  AL    +D   P VLH   P+ +R    GE
Sbjct: 132 RGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGE 191

Query: 248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIG-AGGVIPPPATYFEKVQAVVKKYDI 306
            +EE+    A+ LE LIL+ GPETIAAFI EPV+G AGG++ PP  Y ++V+ +  KY I
Sbjct: 192 GDEEF-AEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGI 250

Query: 307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQS 366
           L IADEV   FGR G MF C+   I PD++  AK L+  Y+P+ A+L S  + E      
Sbjct: 251 LLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGD 310

Query: 367 NTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-FSDSPIIG 425
              G+F HG TYSG+P++CA A+  L I +E +++E+V +I    Q G++A  +D P++G
Sbjct: 311 --AGAFMHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVG 368

Query: 426 EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMS 485
           ++RG GLI   E   +K+   PF  E  +GA   A   + G+L+R  GD I + PP I++
Sbjct: 369 DVRGLGLIGAIELVADKATKTPF--EARVGARVRAAALERGLLIRPLGDVIYLMPPLIIT 426

Query: 486 PEEVDELISKYGKALKATEERVK 508
            EE+DEL+    +AL  T   + 
Sbjct: 427 REEIDELVDALREALDETLADLL 449

Length = 449

>gnl|CDD|180994 PRK07480, PRK07480, putative aminotransferase; Validated

 Score =  510 bits (1316), Expect = e-179
 Identities = 190/453 (41%), Positives = 277/453 (61%), Gaps = 22/453 (4%)

Query: 73  TAGWQSTD----VHPL------------VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG 116
           TA  Q+ D    +HP             VI ++EG Y++D  G K LD +AGLWC  +G 
Sbjct: 7   TAELQALDAAHHLHPFSDMKALNEKGSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGY 66

Query: 117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND 176
               L  AA  Q+  LP+Y++F+  T  P+++LA +L E+        VFFTNSGSEAND
Sbjct: 67  GRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEV-APPGFNHVFFTNSGSEAND 125

Query: 177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC 236
           T +++V +Y    G+P KK  I+R+  YHGST+  ASL G+  +H++ DLP P ++H D 
Sbjct: 126 TVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQ 185

Query: 237 PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEK 296
           P+++       T EE+    A  LE  IL+ G + +AAFI EP+ GAGGVI PPATY+ +
Sbjct: 186 PYWFGEG-GDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPE 244

Query: 297 VQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSP 356
           +Q + +KYDIL +ADEVIC FGR G  FG   + IKPDL++ AK L+S Y+P+GA+ V  
Sbjct: 245 IQRICRKYDILLVADEVICGFGRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGD 304

Query: 357 EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV-NKIAPKFQDGV 415
            V+EV+  +    G F+HGFTYSGHPV+ AVA+  L+I ++  IVE+V +   P  Q  +
Sbjct: 305 RVAEVLIEEG---GEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQKRL 361

Query: 416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN 475
           +  +D P++GE+RG GL+   E   +K+  E F    G+G      C  +G+++R  GD 
Sbjct: 362 RELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAVGDR 421

Query: 476 IMMSPPFIMSPEEVDELISKYGKALKATEERVK 508
           +++SPP +++  E+DEL+ K  KAL AT   + 
Sbjct: 422 MIISPPLVITHAEIDELVEKARKALDATAAELG 454

Length = 456

>gnl|CDD|236026 PRK07482, PRK07482, hypothetical protein; Provisional

 Score =  491 bits (1265), Expect = e-171
 Identities = 186/429 (43%), Positives = 273/429 (63%), Gaps = 4/429 (0%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
             ++E  EG  + D  G++Y+D+ AGL+C  +G     +  A   Q   L +YH++    
Sbjct: 33  GRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHG 92

Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
           T+ S+ L+K +++   A  M+KV++  SGS+AN+TQ+KLVWYYNN LGRP KKK I+R +
Sbjct: 93  TEASITLSKRIIDRAPA-GMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWR 151

Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 262
            YHGS ++  SL+GL   HQ FDLP   VLHT+ PHY+R A  G +EE++S   A+ LE+
Sbjct: 152 GYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEE 211

Query: 263 LILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 322
           LIL EGP+TIAAFIAEPV+G GG++PPPA Y+  +QAV+KKYDIL IADEV+  FGRLG+
Sbjct: 212 LILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGS 271

Query: 323 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382
           MFG D Y I+PDL++ AK L+SAY P+   +V  +V +V+   S+  G+  HG+TYSGHP
Sbjct: 272 MFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHP 331

Query: 383 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRGTGLILGTEFADN 441
           +  A A+  L I +  N+V    ++   F+  ++ AF D P++GE+RG G++   EF  +
Sbjct: 332 ICAAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVAD 391

Query: 442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRV--SGDNIMMSPPFIMSPEEVDELISKYGKA 499
           +    PF P   IG    A   + G++ R    GD +  +PP +++  E DE+++    A
Sbjct: 392 RDDRTPFDPALKIGPQVSAAALERGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDA 451

Query: 500 LKATEERVK 508
           +     R+ 
Sbjct: 452 VDEVLGRLL 460

Length = 461

>gnl|CDD|99735 cd00610, OAT_like, Acetyl ornithine aminotransferase family

 Score =  423 bits (1091), Expect = e-146
 Identities = 146/427 (34%), Positives = 235/427 (55%), Gaps = 31/427 (7%)

Query: 78  STDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS 137
           +   +PLVI ++EG+Y+YDV+G +YLD L+G+    LG + P +V A   QL  L  +  
Sbjct: 14  TVRPYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSL 73

Query: 138 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF 197
            +    +P+++LA+ LL + T   + KVFF NSG+EA +  +KL   Y        +KK 
Sbjct: 74  GFF-YNEPAVELAELLLAL-TPEGLDKVFFVNSGTEAVEAALKLARAYTG------RKKI 125

Query: 198 IARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257
           I+ + +YHG TL A SL+G       F    P VLH   P+ +R              LA
Sbjct: 126 ISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPP----------AELA 175

Query: 258 NNLEDLI--LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 315
           ++LE L   L+E PE +AA I EP+ G GGVI PP  Y + ++ + +K+ IL IADEV  
Sbjct: 176 DDLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQT 235

Query: 316 AFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHG 375
            FGR G MF  + + ++PD+V+  K L    +P+GA+L   E+ +         G   HG
Sbjct: 236 GFGRTGKMFAFEHFGVEPDIVTLGKGLGGG-LPLGAVLGREEIMDAFP-----AGPGLHG 289

Query: 376 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGLIL 434
            T+ G+P++CA A+  L++ +E  ++E   ++    ++ ++      P++G++RG GL++
Sbjct: 290 GTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMI 349

Query: 435 GTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELI 493
           G E   +++     PP+  + A       + G+L+R SG N I + PP I++ EE+DE +
Sbjct: 350 GIELVKDRATK---PPDKELAAKIIKAALERGLLLRPSGGNVIRLLPPLIITEEEIDEGL 406

Query: 494 SKYGKAL 500
               +AL
Sbjct: 407 DALDEAL 413

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation. Length = 413

>gnl|CDD|235913 PRK07036, PRK07036, hypothetical protein; Provisional

 Score =  417 bits (1075), Expect = e-142
 Identities = 159/435 (36%), Positives = 251/435 (57%), Gaps = 9/435 (2%)

Query: 75  GWQSTDVH----PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 130
            W           LVI ++EG YV D +G++YLD + G+WC  +G     +  A   Q  
Sbjct: 22  PWHDFSSLGKEGSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQAR 81

Query: 131 TLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG 190
            LP+Y  F + T  P+ +LA +L E+     +  VF T  GS A D+ ++ V YY N  G
Sbjct: 82  RLPYYTPFGDMTNAPAAELAAKLAEL-APGDLNHVFLTTGGSTAVDSALRFVHYYFNVRG 140

Query: 191 RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHP-GETE 249
           RP KK  I R  +YHGST + ASL+G  A   +FD  +  V H   P+ +R   P G +E
Sbjct: 141 RPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYR--RPAGMSE 198

Query: 250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI 309
             +   L +  ED IL  G + IAAFIAEP++G+GGVI PP  Y  +++ + ++YDIL+I
Sbjct: 199 AAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYI 258

Query: 310 ADEVICAFGRLGTMFGCDK-YSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT 368
           +DEV+  FGRLG  F  +  + I+PD+++FAK L+S Y P+GA+++S  + +VI   +  
Sbjct: 259 SDEVVTGFGRLGHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAK 318

Query: 369 LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR 428
              F+HGFTYSGHPV+CA A++ ++I +   + E V ++ P F++ + +  + P++G++R
Sbjct: 319 GNVFTHGFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASLRELPLVGDVR 378

Query: 429 GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEE 488
           G  L+   E   +K      P +  IG      C++ G+LVR      ++SPP I++  +
Sbjct: 379 GDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLEHLCVLSPPLIITRAQ 438

Query: 489 VDELISKYGKALKAT 503
           +DE+++    A++ T
Sbjct: 439 IDEIVAILRAAIEET 453

Length = 466

>gnl|CDD|168967 PRK07481, PRK07481, hypothetical protein; Provisional

 Score =  379 bits (975), Expect = e-127
 Identities = 150/440 (34%), Positives = 246/440 (55%), Gaps = 1/440 (0%)

Query: 68  MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATA 127
              P     +     P++I + +G YVYD++GKK LD + GLW   +G +   +  A   
Sbjct: 10  FWHPMAHPAEMKARPPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVR 69

Query: 128 QLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN 187
           QL+ L +Y +F   T   +++L+ EL++MF    M +VFF++ GS++ +T +KL   Y  
Sbjct: 70  QLDELEYYSTFDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWK 129

Query: 188 ALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGE 247
             G+P + KFI+ ++ YHG+    AS++G     + ++   P   H + P  +R     +
Sbjct: 130 VRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQ 189

Query: 248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 307
             EE +   A  LE  I  +GP+TIAAFIAEPV GAGGVI PPA ++  V+ V  ++ IL
Sbjct: 190 DPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGIL 249

Query: 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN 367
            IADEV+  FGR G+ FG   + +KPD++  AK ++S Y+P+GA +V+  +++   + ++
Sbjct: 250 LIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANAD 309

Query: 368 TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-SPIIGE 426
             G+  HG+TYSGHPV+CA A+  L I    ++     K      +G++   +   ++G+
Sbjct: 310 FGGAIMHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGD 369

Query: 427 IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSP 486
           +RG GL+L  +   +K+  EP  P  G          ++G+LVR SG  I++SPP ++  
Sbjct: 370 VRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPSGTKIILSPPLVIQR 429

Query: 487 EEVDELISKYGKALKATEER 506
           E+VD ++      L A   +
Sbjct: 430 EDVDRIVDALDAGLSAVPFQ 449

Length = 449

>gnl|CDD|235823 PRK06541, PRK06541, hypothetical protein; Provisional

 Score =  353 bits (909), Expect = e-117
 Identities = 158/439 (35%), Positives = 233/439 (53%), Gaps = 21/439 (4%)

Query: 80  DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFW 139
           D    VI + EG Y++D  GK+YLD LAGL+   +G     L  AA  Q  TL F+   W
Sbjct: 32  DAPVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFF-PLW 90

Query: 140 NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 199
           +    P+++LA E L       + +VFFT  GSEA ++  KL   Y    G+P K K I+
Sbjct: 91  SYAHPPAIELA-ERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVIS 149

Query: 200 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259
           R  +YHG+T  A +++GLPA    F+   P        +++R    G+  E +    A+ 
Sbjct: 150 RAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADR 209

Query: 260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319
           +E+ I  EGP+T+AA   EPV  AGG  PPP  YFE+V+ +  +YD+L ++DEVICAFGR
Sbjct: 210 IEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGR 269

Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
           LG MFGC+++   PD+++ AK ++S Y P+GA++ S  + E           F HG+T+ 
Sbjct: 270 LGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGPTM---FLHGYTFG 326

Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFA 439
           GHPVS AVA+  L I++   +++ V    P F+  ++   D PI+G++RG G   G E  
Sbjct: 327 GHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELV 386

Query: 440 DNKSPNEPFPPE------WGI--GAYFGAQCEKHGMLVRVS--GDN-IMMSPPFIMSPEE 488
            +K+  E F  +       G    A F A     G+  R    GD  + ++PP I   EE
Sbjct: 387 KDKATKETFTDDESERLLRGFLSPALFEA-----GLYCRADDRGDPVVQLAPPLISGQEE 441

Query: 489 VDELISKYGKALKATEERV 507
            DE+       L     R+
Sbjct: 442 FDEIEQILRSVLTEAWARL 460

Length = 460

>gnl|CDD|181707 PRK09221, PRK09221, beta alanine--pyruvate transaminase; Provisional

 Score =  350 bits (900), Expect = e-116
 Identities = 159/459 (34%), Positives = 241/459 (52%), Gaps = 19/459 (4%)

Query: 49  TDASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAG 108
               +    +  N    H M  PFTA  Q     P ++  +EG Y  D +G+K LD  AG
Sbjct: 1   MPDMAAAARTDPNDLDAHWM--PFTANRQFKA-APRLLVSAEGMYYTDADGRKILDGTAG 57

Query: 109 LWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKP-SLDLAKELLEMFTASKMAKVFF 167
           LWC   G   P +V A   Q  TL +  +F  +   P + +LA+ L E+     +  VFF
Sbjct: 58  LWCCNAGHGRPEIVEAVARQAATLDYAPAF--QMGHPLAFELAERLAEL-APGGLDHVFF 114

Query: 168 TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP 227
           TNSGSE+ DT +K+   Y+ A G+  + + I R++ YHG      S+ G+    + F   
Sbjct: 115 TNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGL 174

Query: 228 APFVLHTDCPHYWRYAHPGET--EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGG 285
            P V H   PH         +  + E+   LA++LE L+      TIAA I EP+ G+ G
Sbjct: 175 LPGVDHL--PHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAG 232

Query: 286 VIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSA 345
           V+ PP  Y ++++ +  K+ IL I DEVI  FGRLG  F  +++ + PD+++FAK L++ 
Sbjct: 233 VLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNG 292

Query: 346 YMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVN 405
            +P+GA++ S E+ +           F HG+TYS HPV+CA  +  L IY+E ++ E+  
Sbjct: 293 AIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFERAA 352

Query: 406 KIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAY-FGAQCEK 464
           ++AP F+D V +    P + +IR  GL+ G E A       P P   G   Y    +C +
Sbjct: 353 ELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELA-------PRPGAPGARGYEAFMKCFE 405

Query: 465 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT 503
            G+LVR +GD I +SPP I+   ++DEL+   G AL+A 
Sbjct: 406 KGLLVRYTGDTIALSPPLIIEKAQIDELVDALGDALRAV 444

Length = 445

>gnl|CDD|171472 PRK12403, PRK12403, putative aminotransferase; Provisional

 Score =  341 bits (877), Expect = e-113
 Identities = 168/431 (38%), Positives = 254/431 (58%), Gaps = 10/431 (2%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           P V+ + EG +++D +GK+YLD ++GLWCT LG     L AAA  Q+  LP+Y+ F++ T
Sbjct: 37  PRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFH-T 95

Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
           T P++    ELL        +   +TNSGSEAN+  ++ V  Y   LG+P KK  I R  
Sbjct: 96  THPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWN 155

Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGE-TEEEYSTRLANNLE 261
            YHGSTL A +L G+  +H+   L  P V H D P YW YA+ GE T  E+  R A  LE
Sbjct: 156 GYHGSTLAATALGGMKFMHEMGGL-IPDVAHIDEP-YW-YANGGELTPAEFGRRAALQLE 212

Query: 262 DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321
           + IL+ G E +A F+AEP  GAGG+I PP +Y+ ++Q + ++YD+L  ADEVI  FGR G
Sbjct: 213 EKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTG 272

Query: 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 381
             F  + +  +PD +S AK L+S Y+P+G +++S  ++E +  Q    G F+HG TYSGH
Sbjct: 273 EWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQG---GVFAHGLTYSGH 329

Query: 382 PVSCAVAIEALKIYKERNIVEQV-NKIAPKFQDGVK-AFSDSPIIGEIRGTGLILGTEFA 439
           PV+ AVAI  LK  ++  +V +V +   P  Q  ++  F D P++GE++G GL+   +FA
Sbjct: 330 PVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFA 389

Query: 440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKA 499
           ++K+  + F  E  +         + G+++R +   ++M+P  +    E+DEL+ K   A
Sbjct: 390 EDKATRKRFANENDLAWRCRTIGFEEGVIIRSTLGRMIMAPALVAGRAEIDELVDKTRIA 449

Query: 500 LKATEERVKEL 510
           +  T   V  L
Sbjct: 450 VDRTAREVGVL 460

Length = 460

>gnl|CDD|236027 PRK07483, PRK07483, hypothetical protein; Provisional

 Score =  337 bits (867), Expect = e-111
 Identities = 157/432 (36%), Positives = 244/432 (56%), Gaps = 19/432 (4%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYH-SFWNR 141
             V    EG Y+ D  GK+YLD+  G   + LG S PR++AA  AQ++ L + H SF+  
Sbjct: 13  LPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTSFF-- 70

Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
           TT+P+  LA  L+    A  +  V+F + GSEA +  +KL   Y   +G+P ++ FIAR+
Sbjct: 71  TTEPAEALADRLVAAAPAG-LEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARR 129

Query: 202 KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY-WRYAHPGETEEEYSTRLANNL 260
           +SYHG+TL A ++ G     + F  P     H   P Y +R    GE++E Y  RLA+ L
Sbjct: 130 QSYHGNTLGALAIGGNAWRREPF-APLLIEAHHVSPCYAYREQRAGESDEAYGQRLADEL 188

Query: 261 EDLILKEGPETIAAFIAEPVIGA-GGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319
           E  IL+ GP+T+AAF+AE V+GA  G +PP   YF++++ V  +Y +L I DEV+C  GR
Sbjct: 189 EAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGR 248

Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
            GT+F C++  + PDLV+ AK L + Y PIGA+L S  + + I   S   G F HG TY 
Sbjct: 249 TGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADGS---GFFQHGHTYL 305

Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRGTGLILGTEF 438
           GH  +CA A+   ++  E  ++  V     + +  ++      P +G+IRG GL +G E 
Sbjct: 306 GHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVEL 365

Query: 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR--------VSGDNIMMSPPFIMSPEEVD 490
             +++   PF P   + A    +    G++V         V GD+++++PPFI++  ++D
Sbjct: 366 VADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFIITAAQID 425

Query: 491 ELISKYGKALKA 502
           E++ + G A+ A
Sbjct: 426 EIVERLGDAIDA 437

Length = 443

>gnl|CDD|223238 COG0160, GabT, 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

 Score =  328 bits (842), Expect = e-107
 Identities = 143/432 (33%), Positives = 231/432 (53%), Gaps = 31/432 (7%)

Query: 82  HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNR 141
            PLVI ++EG+Y+YDV+G +YLD L+G+    LG + PR+V A   QL  L   H+   R
Sbjct: 38  FPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHT---R 94

Query: 142 --TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 199
               +P ++LA++L  +   S + KVFF NSG+EA +  +K+   Y    GRP     IA
Sbjct: 95  DLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYT---GRPG---VIA 148

Query: 200 RQKSYHGSTLIAASLSGLPALHQK-FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258
              ++HG TL A SL+G    ++  F    P V H   P+ +R    G   EE       
Sbjct: 149 FDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYR-CPFGIGGEECGDDALE 207

Query: 259 NLEDLI--LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 316
            +E  +  L+ GPE +AA I EP+ G GG+I PP  + + ++ + +++ IL IADEV   
Sbjct: 208 YIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTG 267

Query: 317 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF 376
           FGR G MF  + + ++PD+V+ AK+L    +P+ A++   E+               HG 
Sbjct: 268 FGRTGKMFAFEHFGVEPDIVTLAKSL-GGGLPLSAVVGRAEI--------MDWPPGGHGG 318

Query: 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILG 435
           T+ G+PV+CA A+  L + +E N++E+  ++    +D ++      P+IG++RG GL++G
Sbjct: 319 TFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIG 378

Query: 436 TEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPEEVDEL 492
            E   ++   EP      + A   A+  + G+L+   G +   + + PP  +S EE+DE 
Sbjct: 379 VELVKDRDTKEPDA---ELAAKIVARAFERGLLLLTCGPHGNVLRILPPLTISDEELDEG 435

Query: 493 ISKYGKALKATE 504
           +    +ALK   
Sbjct: 436 LDILEEALKEAL 447

Length = 447

>gnl|CDD|180330 PRK05965, PRK05965, hypothetical protein; Provisional

 Score =  325 bits (836), Expect = e-106
 Identities = 142/424 (33%), Positives = 236/424 (55%), Gaps = 3/424 (0%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
             V+  ++G+ + D +G + LD+ AGLWC  +G  +  +V AA  Q+  LP+   +++  
Sbjct: 29  VTVLASAKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFG 88

Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
           ++P++ LA +L E    S +  V+FT  GS+A D+ V+ + +Y NA GRP+KK+FI+ ++
Sbjct: 89  SEPAIRLAAKLAERAPGS-LNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLER 147

Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 262
            YHGS+ + A L+ LPA H+ FDLP P+      P+ +R     + +   +  +A  L  
Sbjct: 148 GYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAA-LRA 206

Query: 263 LILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 322
            + + G + +AAF  EP+ G+GGVI PP  + + ++   ++  ILF+ADEVI  FGR G 
Sbjct: 207 KVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGP 266

Query: 323 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382
           +F C+   + PDL++ AK L+S Y+P+GA+L+S  V + I   +       HG+TYS HP
Sbjct: 267 LFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHP 326

Query: 383 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNK 442
           VS AV +E L++Y E  ++    K  P+F  G+ A    P++G++RG GL+   E   +K
Sbjct: 327 VSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADK 386

Query: 443 SPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYGKALK 501
           +   PF            +   +G++ R  GD ++  +P    +  E D +  +  K L 
Sbjct: 387 ATKTPFDAALDPADRIFDRAYANGLVFRAFGDGVLGFAPALCCTEGEFDLIFERTRKTLD 446

Query: 502 ATEE 505
               
Sbjct: 447 DVLA 450

Length = 459

>gnl|CDD|233000 TIGR00508, bioA, adenosylmethionine-8-amino-7-oxononanoate transaminase

 Score =  324 bits (833), Expect = e-106
 Identities = 141/425 (33%), Positives = 230/425 (54%), Gaps = 23/425 (5%)

Query: 71  PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 130
           P+T       + PL IE++EG Y+YD +G++Y+D ++  W    G + P + AA   QL+
Sbjct: 4   PYTQ--MKDALPPLPIERAEGVYLYDEDGREYIDGISSWWVNIHGHNHPEINAAIKEQLD 61

Query: 131 TLPFYHS-FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL 189
            L   H  F   T +P+++LA+ L+E+ T   + KVFF++SGS A +  +K+   Y    
Sbjct: 62  KLE--HVMFGGLTHEPAIELAERLVEI-TPEGLEKVFFSDSGSVAVEVALKMALQYWQNQ 118

Query: 190 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPF-VLHTDCPHYWRYAHPGET 248
           GRP K +F+A +  YHG T  A S+  +   H  F+ P  F V+    P  +R   P + 
Sbjct: 119 GRPGKTRFLAFRNGYHGDTFGAMSVGDVGGFHALFE-PLLFEVVFIPAPPCYRCWDPDDC 177

Query: 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKYDIL 307
           E E        LE L+ +   E IAAFI EP++ GAGG+   P  Y  K++ +  +Y +L
Sbjct: 178 EAEC----LAALEALLEEHADE-IAAFIVEPLVQGAGGMRFYPPEYLRKLRELCDEYGVL 232

Query: 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN 367
            IADE+   FGR G +F C+   + PD++  +K L+  Y+P+ A L + E+ E      +
Sbjct: 233 LIADEIATGFGRTGKLFACEHAGVTPDILCLSKGLTGGYLPLAATLTTDEIYEAF-YSDD 291

Query: 368 TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI 427
              +F HG TY+G+P++CA A+ +L + +E + +EQV +I  + + G+    D P + ++
Sbjct: 292 EGKAFMHGHTYTGNPLACAAALASLDLLEEEDWLEQVARIEAQLRAGLAPLRDHPGVADV 351

Query: 428 RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPE 487
           R  G I   E        EP+      GA       + G+L+R  G+ I + PP+I++ E
Sbjct: 352 RVLGAIGAVEL---VRDVEPYI-----GAKIQQFFLERGVLLRPLGNVIYLMPPYIITDE 403

Query: 488 EVDEL 492
           E+++L
Sbjct: 404 ELEKL 408

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae [Biosynthesis of cofactors, prosthetic groups, and carriers, Biotin]. Length = 417

>gnl|CDD|201078 pfam00202, Aminotran_3, Aminotransferase class-III

 Score =  311 bits (799), Expect = e-103
 Identities = 128/356 (35%), Positives = 194/356 (54%), Gaps = 18/356 (5%)

Query: 85  VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK 144
            I K++G ++YDV+G++YLD L+G+    LG   P++V A   Q + L  + SF   TT+
Sbjct: 1   FITKAKGVWLYDVDGRRYLDFLSGIAVVNLGHCHPKIVQAVKEQADKL-THTSFRAFTTE 59

Query: 145 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSY 204
           P+L LA++L +  T   + +VFF NSGSEAN+T +KL   Y    G   K K IA    +
Sbjct: 60  PALQLAEKLAQ-LTPGGLDRVFFMNSGSEANETAIKLARQYAKKKGATGKTKIIAFSGGF 118

Query: 205 HGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLI 264
           HG TL A S++G     + F    P V     P    Y      EEE     A+    LI
Sbjct: 119 HGRTLGALSVTGSSGYKKGFGPSLPGVYF--LP----YPDLEAAEEE--LACADEALRLI 170

Query: 265 LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF 324
                + IAA I EP+ G GGV+PPP  +   ++ + KK+ +L IADEV   FGR G +F
Sbjct: 171 KAVHDDNIAAVIVEPIQGEGGVVPPPPGFLAGLREICKKHGVLLIADEVQTGFGRTGKLF 230

Query: 325 GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS 384
            C+ Y + PD+++ AKAL+    P+ A+L + E+ +  H         SHG T+ G+P++
Sbjct: 231 ACEHYGVTPDIMTLAKALTGGL-PLSAVLATAEIMQAFHPG-------SHGGTFGGNPLA 282

Query: 385 CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFAD 440
           CA A+  L I ++ N+++   +     + G+ A  D P+IG++RG GL++  E   
Sbjct: 283 CAAALAVLDIIEDENLLQNAQEKGDYLRKGLLALQDKPVIGDVRGKGLMIAIEIVK 338

Length = 338

>gnl|CDD|181078 PRK07678, PRK07678, aminotransferase; Validated

 Score =  315 bits (808), Expect = e-102
 Identities = 144/428 (33%), Positives = 247/428 (57%), Gaps = 16/428 (3%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
            +V+ K+EG++V D+ G +YLD ++GLWC  +G     L  AA  QL TL ++     ++
Sbjct: 30  TMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFP--LTQS 87

Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
            +P++ LA++L E      +  +FF+NSGSEAN+T  K+   Y+   G P++ KFI+R +
Sbjct: 88  HEPAIKLAEKLNEWLGGEYV--IFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYR 145

Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 262
           +YHG+++ A + +G      K++  AP  LH   P  +R     E+E+ Y       ++ 
Sbjct: 146 AYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYR-MPGIESEDIYDLECVKEIDR 204

Query: 263 LILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 322
           ++  E  ETIAA I EP+I  GGV+ PP  Y + V+ + +K+  L I+DEVIC FGR G 
Sbjct: 205 VMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGK 264

Query: 323 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382
            FG   Y +KPD+++ AK ++SAY+P+ A  V  E+ E    +      F H  T+ G+P
Sbjct: 265 AFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEY-EHFRHVNTFGGNP 323

Query: 383 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADN 441
            +CA+A++ L+I +  N++E+  ++     + +K    + P++G+IRG GL++G E  ++
Sbjct: 324 AACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVND 383

Query: 442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGD------NIM-MSPPFIMSPEEVDELIS 494
           K   EP   +  + +   A C++ G+++  +GD      N++ +SPP ++S EE+  ++ 
Sbjct: 384 KETKEPADND-KVASVVAA-CKEKGLIIGKNGDTVAGYNNVLTLSPPLVISSEEIAFIVG 441

Query: 495 KYGKALKA 502
               AL+ 
Sbjct: 442 TLKTALER 449

Length = 451

>gnl|CDD|183999 PRK13360, PRK13360, omega amino acid--pyruvate transaminase; Provisional

 Score =  309 bits (794), Expect = e-100
 Identities = 151/455 (33%), Positives = 235/455 (51%), Gaps = 17/455 (3%)

Query: 53  SQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCT 112
           ++    T N      M  PFTA  Q     P ++  ++G Y    +G++ LD  AGLWC 
Sbjct: 2   TENVSQTPNDLSAFWM--PFTANRQFKK-APRLLVAAKGMYYTTHDGRRVLDGTAGLWCV 58

Query: 113 ALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGS 172
             G   P +V A  AQ   L +  +F     K   +LA  + E+     +  VFFTNSGS
Sbjct: 59  NAGHGRPEIVEAVRAQAGELDYAPAFQMGHPKA-FELANRIAEIAPGG-LNHVFFTNSGS 116

Query: 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVL 232
           E+ DT +K+   Y+ A G  ++ + I R++ YHG      S+ G+    + F    P V 
Sbjct: 117 ESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVD 176

Query: 233 HTDCPHYWRYAHPGET--EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPP 290
           H   PH    A    +  + E+   LA+ LE L+      TIAA I EPV G+ GV+ PP
Sbjct: 177 HL--PHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPP 234

Query: 291 ATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIG 350
             Y ++++ +  K+ IL I DEVI  FGRLG  F    + + PDL++ AK L++  +P+G
Sbjct: 235 KGYLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMG 294

Query: 351 AILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPK 410
           A+ VS E+ +           F HG+TYSGHP++CA A+  L +Y+   ++ +  ++AP 
Sbjct: 295 AVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLTRAARLAPY 354

Query: 411 FQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAY-FGAQCEKHGMLV 469
           ++D + +  D+P + +IR  GL+   E A       P   + G  AY    +C + G+++
Sbjct: 355 WEDALHSLRDAPHVIDIRNLGLVGAVELA-------PRDGKPGKRAYEVFLKCFEKGLMI 407

Query: 470 RVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE 504
           R +GD + +SPP I+   ++DEL     +ALK T 
Sbjct: 408 RYTGDILALSPPLIIEEAQIDELFDILAQALKETI 442

Length = 442

>gnl|CDD|235884 PRK06917, PRK06917, hypothetical protein; Provisional

 Score =  307 bits (788), Expect = 1e-99
 Identities = 144/438 (32%), Positives = 227/438 (51%), Gaps = 28/438 (6%)

Query: 85  VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTT 143
           VI   +G Y+YD NG KY D  +G     +G     +  A   Q   + F Y S +  T+
Sbjct: 16  VISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRSQF--TS 73

Query: 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKS 203
           +P+  LAK+L ++     +   FF NSGSEAN+T +K+   +    G   K K ++R  S
Sbjct: 74  EPAEKLAKKLSDLSPGD-LNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMS 132

Query: 204 YHGSTLIAASLSGLPALHQKF-----DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258
           YHG T+ A S+SG P   Q+F     D P         P+ +R     +         A 
Sbjct: 133 YHGITMGALSMSGHPLRRQRFVSLLEDYPT-----ISAPYCYRCPV-QKVYPTCQLACAT 186

Query: 259 NLEDLILKEGPETIAAFIAEPVIGA-GGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317
            LE  I + G E IAAFIAEP+IGA G  + PP  Y++ ++ +   YDILFIADEV+   
Sbjct: 187 ELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGL 246

Query: 318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377
           GR G MF  + + ++PD+++  K L + Y PI A +VS  V E I   S ++ S   G T
Sbjct: 247 GRTGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMS---GHT 303

Query: 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRGTGLILGT 436
            S +P+S A A+  L+  ++ N+ E+  +       G++     S IIG++RG GL++G 
Sbjct: 304 LSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGV 363

Query: 437 EFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV--------RVSGDNIMMSPPFIMSPEE 488
           EF  +K   +PF     + +   +   K+G+L+           GD ++++PP  ++  E
Sbjct: 364 EFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTITYSE 423

Query: 489 VDELISKYGKALKATEER 506
           +DEL+S + K+++   ++
Sbjct: 424 LDELLSIFAKSVEEMMQK 441

Length = 447

>gnl|CDD|227325 COG4992, ArgD, Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

 Score =  298 bits (765), Expect = 1e-96
 Identities = 133/427 (31%), Positives = 208/427 (48%), Gaps = 58/427 (13%)

Query: 82  HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS---F 138
            P+VI + EG+YV+D  G++YLD  AG+    LG   P LV A   Q   L  +H    F
Sbjct: 24  LPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKL--WHVSNLF 81

Query: 139 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 198
           +N    P  +LA++L+E+       +VFF NSG+EAN+  +KL   Y    G P K K I
Sbjct: 82  YNE---PQAELAEKLVELS--PFADRVFFCNSGAEANEAALKLARKYT---GDPEKSKII 133

Query: 199 ARQKSYHGSTLIAASLSGLPALHQKF-DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257
           A + S+HG TL A S +G P   + F  L   F        +  +               
Sbjct: 134 AFENSFHGRTLGALSATGQPKYRKGFGPLLPGF-------RHVPF--------------- 171

Query: 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317
           N++E L      E  AA I EP+ G GGVIP P  + + ++ +  ++  L I DEV    
Sbjct: 172 NDIEAL-EAAIDEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGL 230

Query: 318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377
           GR G +F  + Y ++PD+++ AKAL   + PIGA+L + E++              HG T
Sbjct: 231 GRTGKLFAYEHYGVEPDILTLAKALGGGF-PIGAMLATEEIASAFT-------PGDHGST 282

Query: 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-SPIIGEIRGTGLILGT 436
           + G+P++CAVA+  L++  E  ++E V +        ++      P++ E+RG GL++G 
Sbjct: 283 FGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGI 342

Query: 437 EFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISK 495
           E  +                       + G+LV  +G N++   PP +++ EE+DE +  
Sbjct: 343 ELKEPY-----------RARDIVRALREEGVLVLPAGPNVIRFLPPLVITEEEIDEALDA 391

Query: 496 YGKALKA 502
             +AL A
Sbjct: 392 LERALAA 398

Length = 404

>gnl|CDD|180746 PRK06916, PRK06916, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

 Score =  293 bits (751), Expect = 5e-94
 Identities = 143/440 (32%), Positives = 234/440 (53%), Gaps = 11/440 (2%)

Query: 71  PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 130
           PFT      +  PL+IE+ EG  +YDVNG +Y D ++ +W    G   P L  A   QLN
Sbjct: 27  PFTQMKDYLEEDPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLN 86

Query: 131 TLPFYHS-FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL 189
            +   HS        PS+ LA++L+E+     + KVF+++SG+ A +  +K+ + Y    
Sbjct: 87  KIA--HSTLLGLANVPSILLAEKLIEV-VPEGLKKVFYSDSGATAVEIAIKMAFQYWQNK 143

Query: 190 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHT-DCPHYWRYAHP-GE 247
           G+P K++F+  + +YHG T+ A S+  +   HQ +   +  +      P+ + Y  P G 
Sbjct: 144 GKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVY---SSLLFEAIKMPYPYTYRSPYGN 200

Query: 248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKYDI 306
            + E   +    LE+L LKE  E IAA I EP++ GAGG+I  P  Y + ++ +  KY++
Sbjct: 201 DKAEIVKKHLEELEEL-LKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNV 259

Query: 307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQS 366
           LFI DEV   FGR G MF C+  ++ PD+++  K L+  Y+PI   + + E+    +   
Sbjct: 260 LFITDEVATGFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDY 319

Query: 367 NTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGE 426
               +F HG +Y+G+P+ CAVA+  L++Y++ N++EQV +        ++       +G+
Sbjct: 320 EEQKTFFHGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFALKHVGD 379

Query: 427 IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSP 486
           IR  GL++G E   NK   EPF     +G     +  + GML R  G+ I+  PP   + 
Sbjct: 380 IRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPLGNTIVFMPPLASTI 439

Query: 487 EEVDELISKYGKALKATEER 506
           +E+DE++    KA+    E 
Sbjct: 440 DELDEMLRILYKAISDVTEG 459

Length = 460

>gnl|CDD|235687 PRK06062, PRK06062, hypothetical protein; Provisional

 Score =  292 bits (749), Expect = 1e-93
 Identities = 141/439 (32%), Positives = 224/439 (51%), Gaps = 32/439 (7%)

Query: 81  VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWN 140
           ++P+VI  +EGSYV+D  G++YLD  + L  T +G   P++VAA   Q   L        
Sbjct: 34  INPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLC------- 86

Query: 141 RTTKPSL------DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 194
            T  P+       + A+ + E      ++KVFFTN G++AN+  V++   +    GRP  
Sbjct: 87  -TVAPAHANDARSEAARLIAER-APGDLSKVFFTNGGADANEHAVRMARLHT---GRP-- 139

Query: 195 KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254
            K ++  +SYHG T  A +L+G P      D     V+H   P  +R      TEEE   
Sbjct: 140 -KVLSAYRSYHGGTGSAINLTGDPRRWPN-DTGRAGVVHFFGPFLYRSEFHATTEEEECE 197

Query: 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI 314
           R   +LE +I  EGP TIAA + E V G  G++ PP  Y   V+ +  ++ I+ IADEV+
Sbjct: 198 RALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVM 257

Query: 315 CAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSH 374
             FGR G  F  + + + PDL++FAK ++S Y+P+G + +S  ++     +      +  
Sbjct: 258 AGFGRTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFADR-----PYPG 312

Query: 375 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKI-APKFQDGVKAFSD-SPIIGEIRGTGL 432
           G TYSGHP++CA A+  +   +E  IVE   +I A     G++  ++  P +GE+RG G+
Sbjct: 313 GLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGV 372

Query: 433 ILGTEFADNKSPNEPFPPEWGIGAY---FGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEV 489
               E   ++   EP  P     A      A C++ G+L  V+G+ I + PP  ++ +EV
Sbjct: 373 FWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVNGNRIHVVPPCTVTEDEV 432

Query: 490 DELISKYGKALKATEERVK 508
            E ++    AL   +    
Sbjct: 433 REGLAILDAALAVADAATA 451

Length = 451

>gnl|CDD|235056 PRK02627, PRK02627, acetylornithine aminotransferase; Provisional

 Score =  289 bits (742), Expect = 2e-93
 Identities = 130/425 (30%), Positives = 209/425 (49%), Gaps = 57/425 (13%)

Query: 82  HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS---F 138
            P+   + EG+ ++D +GK+YLD LAG+    LG   P+LV A   Q   L   H+   +
Sbjct: 21  LPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKL--IHTSNLY 78

Query: 139 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 198
           +    +P  +LA++L+E+   S M KVFF NSG+EAN+  +KL   Y +  G   K + I
Sbjct: 79  YI---EPQEELAEKLVEL---SGMDKVFFCNSGAEANEAAIKLARKYGHKKGI-EKPEII 131

Query: 199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258
             + S+HG TL   S +G P   + F+   P V              G     +     N
Sbjct: 132 TAENSFHGRTLATLSATGQPKYQEGFE---PLV-------------EGFIYVPF-----N 170

Query: 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318
           ++E L      +T A  + EP+ G GGV P    Y + ++ +  +  IL I DEV    G
Sbjct: 171 DIEALKAAITDKTAAVML-EPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMG 229

Query: 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 378
           R G +F    Y I+PD+++ AK L    +PIGA+L   +V++V            HG T+
Sbjct: 230 RTGKLFAYQHYGIEPDIMTLAKGLGGG-VPIGAVLAKEKVADV-------FTPGDHGSTF 281

Query: 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTE 437
            G+P++CA A+  ++I +E  ++E   ++    +  ++      P I E+RG GL++G E
Sbjct: 282 GGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIE 341

Query: 438 FADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELISKY 496
                             A    +  + G+L+ V+GDN + + PP I+S EE+DE + + 
Sbjct: 342 LDRP-------------AAEIVKKALEKGLLINVTGDNVLRLLPPLIISKEEIDEAVDRL 388

Query: 497 GKALK 501
            + LK
Sbjct: 389 EEVLK 393

Length = 396

>gnl|CDD|235599 PRK05769, PRK05769, 4-aminobutyrate aminotransferase; Provisional

 Score =  262 bits (671), Expect = 3e-82
 Identities = 140/446 (31%), Positives = 231/446 (51%), Gaps = 36/446 (8%)

Query: 64  KGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVA 123
           +    LA  T  W      PLVIE+ EG +V DV+G  YLD  AG+  T +G + P++V 
Sbjct: 23  RDEKYLAQSTRRWY-----PLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVK 77

Query: 124 AATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVW 183
           A   Q      ++S  +   +P+++LA+ L+E+       KVFFTNSG+E+N+  +K+  
Sbjct: 78  AVKEQAEKF-LHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIAR 136

Query: 184 YYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP-APFVLHTDCPHYWRY 242
           Y+    GR      IA   ++HG T  + SL+    + +K   P  P V+H   P+ +R 
Sbjct: 137 YHT---GRK---YIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRN 190

Query: 243 AHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV 300
               E  EE    + + +ED + K+   PE +AA I EP+ G GG + PP  +F++++ +
Sbjct: 191 PWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKL 250

Query: 301 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSE 360
             KY IL I DEV    GR G MF  + + ++PD+++ AKA++   +P+GA++   E+  
Sbjct: 251 ADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLAKAIAGG-LPLGAVIGRAEL-- 307

Query: 361 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD 420
                   L   SH  T+ G+PV+ A A+  L+  +E  ++E   K+    +  +K   +
Sbjct: 308 ------MFLPPGSHANTFGGNPVAAAAALATLEELEE-GLLENAQKLGEYLRKELKELKE 360

Query: 421 S-PIIGEIRGTGLILGTEFADNKSPNEPFPPE--WGIGAYFGAQCEKHGMLVRVSGDN-I 476
               IG++RG GL++G E   ++   EP P      +   F     K G+L+  +G + I
Sbjct: 361 KYEFIGDVRGLGLMIGVELVKDR--KEPDPKLRDKVLYEAF-----KRGLLLLGAGKSAI 413

Query: 477 MMSPPFIMSPEEVDELISKYGKALKA 502
            + PP I++ EE D  +    +A+K 
Sbjct: 414 RIIPPLIITEEEADIGLEILEEAIKE 439

Length = 441

>gnl|CDD|233098 TIGR00707, argD, transaminase, acetylornithine/succinylornithine family

 Score =  255 bits (654), Expect = 1e-80
 Identities = 139/420 (33%), Positives = 209/420 (49%), Gaps = 52/420 (12%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           P+ I + +G+YVYDVNGK+YLD +AG+   +LG + P+LV A   QL  L   H      
Sbjct: 10  PVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKL--VHVSNLYY 67

Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
           T+P  +LA++L+E    S   +VFF NSG+EAN+  +KL   Y    G   KKK IA + 
Sbjct: 68  TEPQEELAEKLVE---HSGADRVFFCNSGAEANEAALKLARKYTGDKG-KEKKKIIAFEN 123

Query: 203 SYHGSTLIAASLSGLPALHQKFD-LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE 261
           S+HG T+ A S +G P   + F+ L   F        Y  Y                +L+
Sbjct: 124 SFHGRTMGALSATGQPKYQKGFEPLVPGF-------SYAPYNDI------------ESLK 164

Query: 262 DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321
             I  E     AA I EP+ G GGV P  A + + ++ + K  D L I DEV    GR G
Sbjct: 165 KAIDDE----TAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTG 220

Query: 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 381
             F  + Y I+PD+++ AK L     PIGA L   EV+E       T G   HG T+ G+
Sbjct: 221 KFFAYEHYGIEPDIITLAKGLGGGV-PIGATLAKEEVAEAF-----TPG--DHGSTFGGN 272

Query: 382 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADN 441
           P++CA A+  L++ ++  ++E V +    F++ ++    +    E+RG GL+LG E    
Sbjct: 273 PLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLGIELEAP 332

Query: 442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYGKAL 500
                              +  + G+LV  +G  ++   PP I++ EE+DE +S   +A+
Sbjct: 333 -------------CKDIVKKALEKGLLVNCAGPKVLRFLPPLIITKEEIDEAVSALEEAI 379

This family of proteins, for which ornithine aminotransferases form an outgroup, consists mostly of proteins designated acetylornithine aminotransferase. However, the two very closely related members from E. coli are assigned different enzymatic activities. One is acetylornithine aminotransferase (EC 2.6.1.11), ArgD, an enzyme of arginine biosynthesis, while another is succinylornithine aminotransferase, an enzyme of the arginine succinyltransferase pathway, an ammonia-generating pathway of arginine catabolism (See MEDLINE:98361920). Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097). Length = 379

>gnl|CDD|240281 PTZ00125, PTZ00125, ornithine aminotransferase-like protein; Provisional

 Score =  248 bits (636), Expect = 1e-77
 Identities = 138/436 (31%), Positives = 213/436 (48%), Gaps = 52/436 (11%)

Query: 80  DVHPL--VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-H 136
           + HPL  V+++ +G +V+DV GKKY D L+       G   P+++AA   Q   L     
Sbjct: 9   NYHPLPVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSR 68

Query: 137 SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRPNK 194
           +F+N     +    K + ++F      KV   NSG+EA +T +K    W Y       N+
Sbjct: 69  AFYNDVLGLA---EKYITDLF---GYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQ 122

Query: 195 KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254
            K I    ++ G T+ A S S  P  +  F    PFV             PG    +Y  
Sbjct: 123 AKIIFCNGNFSGRTIGACSASTDPKCYNNF---GPFV-------------PGFELVDY-- 164

Query: 255 RLANNLEDL-ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 313
              N++E L  L + P  +AAFI EP+ G  GVI P   Y ++V  + KKY++L I DE+
Sbjct: 165 ---NDVEALEKLLQDPN-VAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEI 220

Query: 314 ICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS 373
               GR G +   D   +KPD+V   KALS    PI A+L + +V  VI           
Sbjct: 221 QTGLGRTGKLLAHDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKPG-------E 273

Query: 374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGL 432
           HG TY G+P++CAVA+EAL++ KE  + E   ++   F+DG+K     SP + EIRG GL
Sbjct: 274 HGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGL 333

Query: 433 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDE 491
           +    F  +   N      W +        +++G+L + + DNI+  +PP +++ E++D+
Sbjct: 334 LNAIVFDHSDGVN-----AWDLCLKL----KENGLLAKPTHDNIIRFAPPLVITKEQLDQ 384

Query: 492 LISKYGKALKATEERV 507
            +    K LK+ +   
Sbjct: 385 ALEIIKKVLKSFDSNK 400

Length = 400

>gnl|CDD|180800 PRK07030, PRK07030, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

 Score =  249 bits (637), Expect = 5e-77
 Identities = 134/430 (31%), Positives = 230/430 (53%), Gaps = 42/430 (9%)

Query: 83  PLV-IEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP------FY 135
           PL+ I + EG ++ D  GK+YLD+++  W    G + PR+      Q++ L       F 
Sbjct: 29  PLIPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILAGFS 88

Query: 136 HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 195
           H       +P ++L++ L+++ T   +++ F+ ++GS A +  +K+ ++Y    G+P KK
Sbjct: 89  H-------EPVIELSERLVKI-TPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKK 140

Query: 196 KFIARQKSYHGSTLIAASLSGL--------PALHQKFDLPAPFVLHTDCPHYWRYAHPGE 247
           +F+    SYHG TL A S+  +        P L     +P+P     DC  Y R    G 
Sbjct: 141 RFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSP-----DC--YLR--PEGM 191

Query: 248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKYDI 306
           + EE+S R+  ++E   L E  + IAA I EP+I GAGG+      Y + ++    +Y +
Sbjct: 192 SWEEHSRRMFAHMEQ-TLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGV 250

Query: 307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQS 366
             I DE+   FGR GTMF C++  I+PD +  +KAL+  Y+P+ A+L +  V +  +   
Sbjct: 251 HLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDY 310

Query: 367 NTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGE 426
            TL +F H  +Y+G+P++CA A+  L I+++ N++E    +A +  +     +D P + E
Sbjct: 311 PTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLADHPHVAE 370

Query: 427 IRGTGLILGTEFADNKSPNEPFPPEW----GIGAYFGAQCEKHGMLVRVSGDNIMMSPPF 482
           +R TG+IL  E   +K+   P+P  W    G+  Y  A   + G L+R  G  +   PP+
Sbjct: 371 VRQTGMILAIEMVQDKASKTPYP--WQERRGLKVYQHAL--ERGALLRPLGSVVYFLPPY 426

Query: 483 IMSPEEVDEL 492
           +++PE++D L
Sbjct: 427 VITPEQIDFL 436

Length = 466

>gnl|CDD|235656 PRK05964, PRK05964, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

 Score =  241 bits (618), Expect = 1e-74
 Identities = 115/429 (26%), Positives = 211/429 (49%), Gaps = 40/429 (9%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP------FYH 136
           P+ I ++EG+Y+Y  +G++ +D+++  W    G + P +  A   QL+ L       F H
Sbjct: 25  PIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIFAGFTH 84

Query: 137 SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 196
                  +P+  LA+ L+ + T   +  VFF++SGS A +  +K+   Y    G P + +
Sbjct: 85  -------EPAERLAQRLVAL-TPGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSR 136

Query: 197 FIARQKSYHGSTLIAASLSGLPALHQKFD--LPAPFVLHTDCPHYWRYAHPGETEEEYST 254
           F++ +  YHG T+   S+     +H  +   L     +    P       P   E+    
Sbjct: 137 FLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFE--QVTAPFP-------PDGYEQATLD 187

Query: 255 RLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKYDILFIADEV 313
            L    E L+ K   E IAAFI EP++ GAGG++     Y  +++ +  ++ +L I DE+
Sbjct: 188 AL----EALLEKHAGE-IAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEI 242

Query: 314 ICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS 373
              FGR GT+F C++  + PD++  +K L+  Y+P+ A L + E+ E  +S      +F 
Sbjct: 243 ATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRA-KAFM 301

Query: 374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI 433
           H  +Y+ +P++CA A  +L ++++  ++E+V  ++    +G++ F D P + ++R  G I
Sbjct: 302 HSPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAI 361

Query: 434 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELI 493
              E           P     G    A   + G+L+R  G+ I + PP+I++ EE+D + 
Sbjct: 362 GAVELDR--------PVLERDGPALRAFALERGVLLRPLGNTIYLMPPYIITAEELDRIT 413

Query: 494 SKYGKALKA 502
               +    
Sbjct: 414 DAIVEVADE 422

Length = 423

>gnl|CDD|181234 PRK08117, PRK08117, 4-aminobutyrate aminotransferase; Provisional

 Score =  236 bits (605), Expect = 1e-72
 Identities = 139/447 (31%), Positives = 221/447 (49%), Gaps = 59/447 (13%)

Query: 82  HP-LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWN 140
           HP L + K EG Y Y V+GK+YLD  +G+    +G   P++V A   Q + L   H    
Sbjct: 24  HPNLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKL--MHGPSG 81

Query: 141 RTTKPS-LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 199
                S L LA+EL E+ T   +   FF+NSG+EA +  +KL  +      RP     I+
Sbjct: 82  VIYYESILKLAEELAEI-TPGGLDCFFFSNSGAEAIEGALKLAKHVT---KRPY---IIS 134

Query: 200 RQKSYHGSTLIAASLSGLPALHQKFDLP-------APFVLHTDCPHYWRYAHPGETEEEY 252
               +HG TL A S++   + ++K+  P       AP+     CP        GE  E  
Sbjct: 135 FTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPK-------GEDPEVC 187

Query: 253 STRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 311
                 +LE L   +  PE +AA I EPV+G GG I PP ++ +K++ +  ++ IL I D
Sbjct: 188 FLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFD 247

Query: 312 EVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS 371
           EV   FGR G  F    + + PD+++ AK ++S  +P+ A++ S E+ E        LG 
Sbjct: 248 EVQTGFGRTGEWFAAQTFGVVPDIMTIAKGIASG-LPLSAVVASKELMEQWP-----LG- 300

Query: 372 FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGT 430
            SHG T+ G+PV+CA A+  L++ KE  +++  N++     + ++   +  P+IG++RG 
Sbjct: 301 -SHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGI 359

Query: 431 GLILGTEFAD-NKSPNEPFPPEWGIGAYFGAQCEK-------HGMLVR---VSGDNIMMS 479
           GL++G E  D +  P+             G   EK        G+L      +G+ + M 
Sbjct: 360 GLMIGIEIVDPDGEPD-------------GDAVEKILDKCLEKGLLFYLCGNAGNVLRMI 406

Query: 480 PPFIMSPEEVDELISKYGKALKATEER 506
           PP  ++ EE+DE +    +AL   E +
Sbjct: 407 PPLTVTKEEIDEGLDILDEALTEYEAK 433

Length = 433

>gnl|CDD|130940 TIGR01885, Orn_aminotrans, ornithine aminotransferase

 Score =  225 bits (575), Expect = 1e-68
 Identities = 136/432 (31%), Positives = 211/432 (48%), Gaps = 59/432 (13%)

Query: 82  HPL--VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSF 138
           HPL  V  K+EG +V+DV GK+YLD L+       G   P++V A T Q   L     +F
Sbjct: 17  HPLPVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAF 76

Query: 139 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRP-NKK 195
           +N         A+ + ++F   K   V   N+G+EA +T +KL   W Y    G P N+ 
Sbjct: 77  YNDVFGE---FAEYVTKLFGYDK---VLPMNTGAEAVETAIKLARKWGYK-VKGIPENQA 129

Query: 196 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255
             ++ + ++HG TL A S+S  P     F    P+V             PG  +  Y   
Sbjct: 130 IIVSAKGNFHGRTLGAISMSTDPDSRTNF---GPYV-------------PGFKKIPY--- 170

Query: 256 LANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 313
             NNLE L   L++    + AFI EP+ G  GV+ P   Y +KV+ +  K+++L IADE+
Sbjct: 171 --NNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEI 228

Query: 314 ICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS 373
               GR G +   D  ++KPD+V   KALS    P+ A+L   +V   I           
Sbjct: 229 QTGLGRTGKLLCVDHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKPG-------E 281

Query: 374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI 433
           HG TY G+P++CAVA+ AL++ +E  + E   K+   F+D +K     PII E+RG GL+
Sbjct: 282 HGSTYGGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKKLP-KPIITEVRGRGLL 340

Query: 434 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEK---HGMLVRVSGDNIM-MSPPFIMSPEEV 489
                 ++K+        W +       C K    G+L + +  NI+ ++PP +++ E++
Sbjct: 341 NAIVIDESKTGRTA----WDL-------CLKLKEKGLLAKPTHGNIIRLAPPLVITEEQL 389

Query: 490 DELISKYGKALK 501
           DE +    K + 
Sbjct: 390 DEGLEIIKKVID 401

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis (OMNI|PG1271), and the other from Staphylococcus aureus (OMNI|SA0170). After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis (SP|P38021). Length = 401

>gnl|CDD|235112 PRK03244, argD, acetylornithine aminotransferase; Provisional

 Score =  222 bits (569), Expect = 9e-68
 Identities = 128/424 (30%), Positives = 195/424 (45%), Gaps = 53/424 (12%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           PL + + EG+ V+DV+GK+YLD L G+   ALG + P +V A T QL TL    + +   
Sbjct: 26  PLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNLF--A 83

Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
           T+P + LA+ L+E+  A +  +VFF NSG+EAN+   KL        GR    K +A + 
Sbjct: 84  TEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLA----RLTGRT---KIVAAEG 136

Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 262
            +HG T+ A +L+G PA    F    P                G     Y    A  L  
Sbjct: 137 GFHGRTMGALALTGQPAKRAPF---EPLP-------------GGVEHVPYGDVDA--LAA 178

Query: 263 LILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 322
            +     +  AA   EP+ G  GV+PPPA Y    + +  ++  L + DEV    GR G 
Sbjct: 179 AV----DDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGA 234

Query: 323 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382
            F      + PD+V+ AK L    +PIGA L     +++       L    HG T+ G+P
Sbjct: 235 WFAHQHDGVTPDVVTLAKGLGGG-LPIGACLAFGPAADL-------LTPGLHGSTFGGNP 286

Query: 383 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNK 442
           V+CA A+  L       ++E   ++  + + G++A    P++  +RG GL+LG       
Sbjct: 287 VACAAALAVLDTIASEGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVL---- 341

Query: 443 SPNEPFPPEWGIGAYFGAQCEKHGMLVR-VSGDNIMMSPPFIMSPEEVDELISKYGKALK 501
               P            A   + G LV  V+ D I ++PP I++  +VD  ++     L 
Sbjct: 342 --TAPVAKA------VEAAAREAGFLVNAVAPDVIRLAPPLIITDAQVDAFVAALPAILD 393

Query: 502 ATEE 505
           A   
Sbjct: 394 AAAA 397

Length = 398

>gnl|CDD|179270 PRK01278, argD, acetylornithine transaminase protein; Provisional

 Score =  213 bits (546), Expect = 2e-64
 Identities = 115/427 (26%), Positives = 194/427 (45%), Gaps = 59/427 (13%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFW--- 139
            L  E+ EG ++ D +G++YLD  +G+   +LG + P LV A   Q   L      W   
Sbjct: 14  DLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKL------WHVS 67

Query: 140 NRTTKPSLDLAKELLEMFTASKMA-KVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 198
           N    P     + L E    +  A KVFFTNSG+EA +  +K    Y+   G P + + I
Sbjct: 68  NLYRIPE---QERLAERLVENSFADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRII 124

Query: 199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258
             + ++HG TL   +  G     + F    P V             PG  +  +      
Sbjct: 125 TFEGAFHGRTLATIAAGGQEKYLEGF---GPLV-------------PGFDQVPF-----G 163

Query: 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318
           ++E L     P T AA + EP+ G GG+ P P  + + ++ +  +  +L I DEV C  G
Sbjct: 164 DIEALKAAITPNT-AAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMG 222

Query: 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 378
           R G +F  +   + PD+++ AK +   + P+GA L + E ++ +     T G  +HG TY
Sbjct: 223 RTGKLFAHEWAGVTPDIMAVAKGIGGGF-PLGACLATEEAAKGM-----TPG--THGSTY 274

Query: 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD--SPIIGEIRGTGLILGT 436
            G+P++ AV    L +      ++ V ++    +  ++   D    +I E+RG GL+LG 
Sbjct: 275 GGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGL 334

Query: 437 EFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISK 495
           +                            G+L   +GDN++ + PP I++ EE+DE + +
Sbjct: 335 KCVVPNRD-------------LVQALRDEGLLTVGAGDNVVRLLPPLIITEEEIDEALER 381

Query: 496 YGKALKA 502
             +A ++
Sbjct: 382 LERAAES 388

Length = 389

>gnl|CDD|236336 PRK08742, PRK08742, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

 Score =  210 bits (535), Expect = 4e-62
 Identities = 115/437 (26%), Positives = 219/437 (50%), Gaps = 28/437 (6%)

Query: 71  PFTAGWQSTDVHPLV-IEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQL 129
           P T   +     PLV I + EG+++   +G++YLD+++  W    G +EPR+ AA  AQ 
Sbjct: 34  PCTQMREHPHTLPLVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQA 93

Query: 130 NTLP------FYHSFWNRTTKPSLDLAKELLEMFTA----SKMAKVFFTNSGSEANDTQV 179
             L       F H        P++ LA++LL +       + ++KVF+ ++GS   +  +
Sbjct: 94  GELEQVMLAGFTHE-------PAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVAL 146

Query: 180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLH---TDC 236
           K+ ++Y +  G   + +FIA +  YHG T+ A ++  +P   + +   AP +L       
Sbjct: 147 KMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVY---APLLLESLFAPS 203

Query: 237 PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIG-AGGVIPPPATYFE 295
           P  +  A PG++ E+Y+ + A+ L+ L  ++ P  I A I EP +  AGG+      Y  
Sbjct: 204 PDAY-LAEPGQSAEDYALQAADALQAL-FEQSPGEICALILEPRLQCAGGMRMHHPAYLR 261

Query: 296 KVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVS 355
           + + +   +    IADE+   FGR GT+F C++  + PDL+  +K L+  ++P+ A+L +
Sbjct: 262 RARELCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLAT 321

Query: 356 PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV 415
            ++ +     S    +F H  +Y+G+P++CA A+  L I+ + +++ +    A +     
Sbjct: 322 QQLYDAFLDDSRER-AFLHSHSYTGNPLACAAALATLDIFADDDVIARNQPTAARMTQLA 380

Query: 416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN 475
               + P + ++R  G+++  E     +   PFPP   +G +        G+++R  GD 
Sbjct: 381 AQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPLGDV 440

Query: 476 IMMSPPFIMSPEEVDEL 492
           +   PP+ +   ++  L
Sbjct: 441 LYWMPPYCVDEAQLALL 457

Length = 472

>gnl|CDD|181401 PRK08360, PRK08360, 4-aminobutyrate aminotransferase; Provisional

 Score =  206 bits (527), Expect = 3e-61
 Identities = 120/432 (27%), Positives = 213/432 (49%), Gaps = 35/432 (8%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           PLV  K+E + V+D+ G +Y+D L+      +G + PR+V A   Q + L  Y +     
Sbjct: 24  PLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHY-TPIYGF 82

Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
               L LA++L+E+       KV F  SGS+AND  +K    Y        ++K ++  +
Sbjct: 83  PVEPLLLAEKLIEI-APGDNPKVSFGLSGSDANDGAIKFARAYTK------RRKILSYLR 135

Query: 203 SYHGSTLIAASLSGLPALHQKFDL-PAPFVLHTDCPHYWRY---AHPGETEEEYSTRLAN 258
           SY+GST  A SL+GL     +  +     V +   P  +R      PG  + E    +  
Sbjct: 136 SYYGSTYGAMSLTGL-DFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKE 194

Query: 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318
             E  +  EG   +AA  AEP+ G  G+I PP  YF+K++ ++ ++ IL + DEV    G
Sbjct: 195 KFEGEVYAEG---VAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLG 251

Query: 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 378
           R G  F  + + ++PD+++  K L    +PI A +   E+ +       +L   +H FT 
Sbjct: 252 RTGKWFAIEHFGVEPDIITLGKPLGGG-LPISATIGRAEIMD-------SLPPLAHAFTL 303

Query: 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIA----PKFQDGVKAFSDSPIIGEIRGTGLIL 434
           SG+PV+ A A+  ++  +E+N++++  K+      + ++  K      +IG++RG GL++
Sbjct: 304 SGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKH---ELIGDVRGIGLMI 360

Query: 435 GTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VSGDNIMMSPPFIMSPEEVDELI 493
           G +   ++   E    E     +   +  + G++V   SG+ + + PP  +  E +DE +
Sbjct: 361 GVDLVKDRETKERAYEEAAKVVW---RAWELGLIVTFFSGNVLRIQPPLTIEKEVLDEGL 417

Query: 494 SKYGKALKATEE 505
               +A++  EE
Sbjct: 418 DILEEAIEDVEE 429

Length = 443

>gnl|CDD|183175 PRK11522, PRK11522, putrescine--2-oxoglutarate aminotransferase; Provisional

 Score =  204 bits (520), Expect = 5e-60
 Identities = 122/428 (28%), Positives = 196/428 (45%), Gaps = 53/428 (12%)

Query: 92  SYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLD--- 148
           + + D  G++++D L G     +G   P +V+A   QL   P +       ++  LD   
Sbjct: 74  NTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLH-------SQELLDPLR 126

Query: 149 --LAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHG 206
             LAK L  + T  K+   FF NSG+E+ +  +KL   Y +  G   K  FIA   ++HG
Sbjct: 127 AMLAKTLAAL-TPGKLKYSFFCNSGTESVEAALKLAKAYQSPRG---KFTFIATSGAFHG 182

Query: 207 STLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILK 266
            +L A S +      + F    P   H           P    E   T L+        K
Sbjct: 183 KSLGALSATAKSTFRKPFMPLLPGFRHV----------PFGNIEAMRTALSE------CK 226

Query: 267 EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC 326
           +  + +AA I EP+ G GGVI PP  Y   V+ +  ++  L I DEV    GR G MF C
Sbjct: 227 KTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFAC 286

Query: 327 DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 386
           +  +++PD++  AKAL    MPIGA + + EV  V+         F H  T+ G+P++CA
Sbjct: 287 EHENVQPDILCLAKALGGGVMPIGATIATEEVFSVL-----FDNPFLHTTTFGGNPLACA 341

Query: 387 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKSP 444
            A+  + +  E+N+  Q  +      DG +  +     ++ E RG G+++  EF DN+  
Sbjct: 342 AALATINVLLEQNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE-- 399

Query: 445 NEPFPPEWGIGAYFGAQCEKHGMLVR---VSGDNIMMSPPFIMSPEEVDELISKYGKALK 501
                    IG  F ++  +  +LV     +   I + PP  ++ E+ ++++    KAL 
Sbjct: 400 ---------IGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKALA 450

Query: 502 ATEERVKE 509
           A    V+E
Sbjct: 451 AMRVSVEE 458

Length = 459

>gnl|CDD|179505 PRK02936, argD, acetylornithine aminotransferase; Provisional

 Score =  199 bits (509), Expect = 3e-59
 Identities = 121/421 (28%), Positives = 198/421 (47%), Gaps = 58/421 (13%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           P+ I K +G+ V D NGK YLD  +G+    LG   P +  A   QL         W+ +
Sbjct: 12  PIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQL------DDIWHVS 65

Query: 143 TKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
              +  L +E+  +    S    VFF NSG+EAN+  +KL   +        K K +  +
Sbjct: 66  NLFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKHT------GKSKIVTFE 119

Query: 202 KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE 261
           +S+HG T    S +G   + + F    P +             PG T   +     N+++
Sbjct: 120 QSFHGRTFGTMSATGQEKIKEGF---GPLL-------------PGFTHVPF-----NDIK 158

Query: 262 DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321
            L  +   E +AA + E V G GGVIP    + ++VQ + KK+  L I DEV    GR G
Sbjct: 159 AL-KEVMNEEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTG 217

Query: 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 381
           T+F  +++ + PD+V+ AK L +  +P+GA++   E+           G  SHG T+ G+
Sbjct: 218 TLFAYEQFGLDPDIVTVAKGLGNG-IPVGAMIGKKELGT-------AFGPGSHGSTFGGN 269

Query: 382 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRGTGLILGTEFAD 440
           P++ A A E L++ K+ + +E+V +    F   ++        +  IRG GL++G E  +
Sbjct: 270 PLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTE 329

Query: 441 NKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELISKYGKA 499
             +P                Q  + G+LV  +G N I + PP +++ EE+D+ +    K 
Sbjct: 330 EVAP-------------VIEQLREEGLLVLSAGPNVIRLLPPLVVTKEELDQAVYLLKKV 376

Query: 500 L 500
           L
Sbjct: 377 L 377

Length = 377

>gnl|CDD|179933 PRK05093, argD, bifunctional N-succinyldiaminopimelate- aminotransferase/acetylornithine transaminase protein; Reviewed

 Score =  198 bits (507), Expect = 1e-58
 Identities = 130/423 (30%), Positives = 204/423 (48%), Gaps = 52/423 (12%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
             +  + EGS V+D  GK+Y+D   G+  TALG   P LV A   Q   L  +H     T
Sbjct: 23  EFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKL--WHISNVFT 80

Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR--PNKKKFIAR 200
            +P+L LAK+L++   A +   VFF NSG+EAN+   KL   Y  A  R  P K + IA 
Sbjct: 81  NEPALRLAKKLIDATFAER---VFFANSGAEANEAAFKLARRY--ACDRHGPEKTEIIAF 135

Query: 201 QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260
             S+HG TL   S+ G P     F  P P                  T   +     N+L
Sbjct: 136 HNSFHGRTLFTVSVGGQPKYSDGFG-PKP---------------ADITHVPF-----NDL 174

Query: 261 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320
             +       T  A + EP+ G GGVIP    + + ++ +  +++ L I DEV    GR 
Sbjct: 175 AAVKAVIDDHT-CAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRT 233

Query: 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG 380
           G +F    Y + PD+++ AKAL   + PIGA+L + E++         +G  +HG TY G
Sbjct: 234 GDLFAYMHYGVTPDILTSAKALGGGF-PIGAMLTTAEIASHFK-----VG--THGSTYGG 285

Query: 381 HPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFA 439
           +P++CAVA     I     ++E V     +F DG++  +    +  EIRG GL++G E  
Sbjct: 286 NPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELK 345

Query: 440 DNKSPNEPFPPEW-GIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYG 497
                     P++ G    F     + G++V V+G +++  +P  ++   ++DE ++++ 
Sbjct: 346 ----------PQYKGRARDFLNAAAEEGVMVLVAGPDVLRFAPSLVIEEADIDEGLARFE 395

Query: 498 KAL 500
           KA+
Sbjct: 396 KAV 398

Length = 403

>gnl|CDD|132290 TIGR03246, arg_catab_astC, succinylornithine transaminase family

 Score =  194 bits (495), Expect = 5e-57
 Identities = 124/421 (29%), Positives = 206/421 (48%), Gaps = 48/421 (11%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           P +  + EGS V+D  GK+Y+D   G+   ALG + P LV A   Q + L  +H     T
Sbjct: 18  PFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKL--WHIGNGYT 75

Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
            +P L LAK+L++   A K   VFF NSG+EAN+  +KL   Y       +K + +A + 
Sbjct: 76  NEPVLRLAKKLVDATFADK---VFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKN 132

Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 262
           S+HG TL   S+ G P   Q F  P P                G     Y     N+L  
Sbjct: 133 SFHGRTLFTVSVGGQPKYSQGFA-PLP---------------GGIKHAPY-----NDLAA 171

Query: 263 LILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 322
                  +T  A I EP+ G GGV+P    + + ++ +  +++ L I DEV    GR G 
Sbjct: 172 AKALISDKT-CAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGE 230

Query: 323 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382
           ++    Y + PD+++ AKAL   + PIGA+L + E++  +      +G  +HG TY G+P
Sbjct: 231 LYAYMHYGVTPDILTSAKALGGGF-PIGAMLTTTEIAAHL-----KVG--THGTTYGGNP 282

Query: 383 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFADN 441
           ++CAVA + L +     ++  V +    F DG++  +    +  EIRG GL++G      
Sbjct: 283 LACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLT-- 340

Query: 442 KSPNEPFPPEW-GIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYGKA 499
                     + G    F     + G++  ++G N++  +P  ++S +++DE ++++ +A
Sbjct: 341 --------EAYQGKAKQFVNAAAEEGVIALIAGPNVVRFAPSLVISDDDIDEGLARFERA 392

Query: 500 L 500
           +
Sbjct: 393 I 393

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason [Energy metabolism, Amino acids and amines]. Length = 397

>gnl|CDD|181493 PRK08593, PRK08593, 4-aminobutyrate aminotransferase; Provisional

 Score =  193 bits (492), Expect = 5e-56
 Identities = 121/443 (27%), Positives = 212/443 (47%), Gaps = 42/443 (9%)

Query: 82  HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTL----P--FY 135
           +PLVI+   G+ + DV+GK Y+D LA      +G + PR+V A  AQ +      P   Y
Sbjct: 24  YPLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMY 83

Query: 136 HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 195
           H        P + LAK+L E+       +V F  SGS+AND  +K    Y    GRP   
Sbjct: 84  HE-------PLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYT---GRPY-- 131

Query: 196 KFIARQKSYHGSTLIAASLSGLPA-LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254
             I+   +YHGST  + S+SG+   + +K+    P  +H   P  +R     E +  +  
Sbjct: 132 -IISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGM-YEEPDANFVE 189

Query: 255 RLANNLEDLILKEGP-ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 313
                L+++  K  P + +A  + E + G GG++ P   YFE +    +++ ILF  D++
Sbjct: 190 EYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDI 249

Query: 314 ICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS 373
               GR G       ++I PDL+SF K+L+   MP+ AI+   E+ E       +L + +
Sbjct: 250 QQGLGRTGKWSSISHFNITPDLMSFGKSLAGG-MPMSAIVGRKEIME-------SLEAPA 301

Query: 374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGL 432
           H FT   +PVSCA A+  + + ++ +++++  +     +     + S    +G++RG GL
Sbjct: 302 HLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGL 361

Query: 433 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG-MLVRVSGDNIMMSPPFIMSPEEVDE 491
            +G +   +K               +   C +HG +++ V+G+ +   PP +++ E++D 
Sbjct: 362 SIGIDIVSDKKLKTRDNEAALKICNY---CFEHGVVIIAVAGNVLRFQPPLVITYEQLD- 417

Query: 492 LISKYGKALKATEERVKELKSQQ 514
                  AL   E+    L++ +
Sbjct: 418 ------TALNTIEQAFTALEAGK 434

Length = 445

>gnl|CDD|235894 PRK06943, PRK06943, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

 Score =  190 bits (484), Expect = 8e-55
 Identities = 109/426 (25%), Positives = 202/426 (47%), Gaps = 20/426 (4%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
            L + + EG+++YD +G++YLD+++  W    G + PR+ AA   QL+TL   H+     
Sbjct: 37  LLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLE--HAMLAGC 94

Query: 143 T-KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
           T +P+++LA E L   T   +   FF + G+ A +  +K+ ++     GR +K++F+   
Sbjct: 95  THEPAIELA-ERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLA 153

Query: 202 KSYHGSTLIAASLSGLPALHQKFD---LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258
             YHG T+ A  ++ +      +D     A  V   D     R A PGET  + + R   
Sbjct: 154 NGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDA----RGARPGETAADVAARALA 209

Query: 259 NLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317
           ++  L   E    IAA I EP V  A G+     +Y   ++A+  +Y +  IADE+    
Sbjct: 210 DVRRL-FAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGC 268

Query: 318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377
           GR GT F C++  + PD +  +K +S  Y+P+  +L    +    +   +    F H  +
Sbjct: 269 GRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYD-DDVTRGFLHSHS 327

Query: 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTE 437
           Y+G+P++C  A+  L ++ E +++ +  + + + +  +   +  P +  +R  G I   +
Sbjct: 328 YTGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFD 387

Query: 438 FADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYG 497
            A +      F         F     +  +L+R  G  + + PP+++  +E+  L  +  
Sbjct: 388 VALDGDAARTFS------RRFFEAALERELLLRPIGTTVYLMPPYVLDDDEIAWLAERTR 441

Query: 498 KALKAT 503
             L AT
Sbjct: 442 ATLDAT 447

Length = 453

>gnl|CDD|215335 PLN02624, PLN02624, ornithine-delta-aminotransferase

 Score =  189 bits (481), Expect = 3e-54
 Identities = 116/440 (26%), Positives = 205/440 (46%), Gaps = 54/440 (12%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWNR 141
           P+V  +++GS ++D  GKKYLD L+       G   P+++ A T Q   L     +F+N 
Sbjct: 58  PVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAFYND 117

Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRPNKKKFIA 199
                 + A+ L  MF    +  +   N+G+E  +T +KL   W Y       N+   ++
Sbjct: 118 KFP---EFAEYLTSMFGYDMVLPM---NTGAEGVETAIKLARKWGYEKKGIPKNEAIIVS 171

Query: 200 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259
               +HG TL A S+S      + F    P +             PG  + ++      +
Sbjct: 172 CCGCFHGRTLAAISMSCDNEATRGF---GPLL-------------PGHLKVDF-----GD 210

Query: 260 LEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317
           L+ L  I +E  + IAAF+ EP+ G  GV+ PP  Y + V+ +  K+++L IADE+    
Sbjct: 211 LDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGL 270

Query: 318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377
            R G M  CD   ++PD+V   KAL    +P+ A+L   +V          +    HG T
Sbjct: 271 ARTGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVML-------CIKPGEHGST 323

Query: 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD--SPIIGEIRGTGLILG 435
           + G+P++ AVA+ AL++ ++  + E+  K+  + +D ++        +I E+RG GL+  
Sbjct: 324 FGGNPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNA 383

Query: 436 TEFADNKSPNEPFPPEWGIGAY-FGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELI 493
               ++            + AY    + ++ G+L + + D I+ ++PP  +S +E+ E  
Sbjct: 384 VVL-NSPKLG-------PVSAYDVCLKLKERGLLAKPTHDTIIRLAPPLSISEDELQECS 435

Query: 494 SKYGKALKATEERVKELKSQ 513
                 L   E  + +L+S 
Sbjct: 436 KALSDVL---EHDLPKLQSA 452

Length = 474

>gnl|CDD|179868 PRK04612, argD, acetylornithine transaminase protein; Provisional

 Score =  187 bits (476), Expect = 3e-54
 Identities = 132/424 (31%), Positives = 216/424 (50%), Gaps = 49/424 (11%)

Query: 84  LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTT 143
           +V+E+ +GS V+D  G++YLD  AG+    LG ++P LVAA T Q   L  +H+     +
Sbjct: 24  VVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKL--WHTSNVFYS 81

Query: 144 KPSLDLAKELLEMFTASKMA-KVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIAR-Q 201
            P L LA+EL+    AS+ A KVF  NSG+EAN+  +KLV  + ++ GRP  K+ I   +
Sbjct: 82  APPLKLAEELVT---ASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFR 138

Query: 202 KSYHGSTLIAASLSGLPALHQKFD-LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260
            S+HG TL A + +  P   + ++ LP  F          RY               N++
Sbjct: 139 GSFHGRTLAAVTATAQPKYQEGYEPLPGGF----------RYVD------------FNDV 176

Query: 261 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320
           E L        +AA + EP+ G GGV+P    +  +V+A+  ++D L + DE+ C  GR 
Sbjct: 177 EALEAAMAGGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRT 236

Query: 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG 380
           GT+F   +  + PD+V+ AKAL   + PIGA+L  P+V+E +       G  +HG T+ G
Sbjct: 237 GTLFAHWQEQVTPDIVTLAKALGGGF-PIGAMLAGPKVAETMQ-----FG--AHGTTFGG 288

Query: 381 HPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFA 439
           +P++ AVA  AL+      I   V + +   + G++A +    +  ++RG GL+LG   A
Sbjct: 289 NPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLA 348

Query: 440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYGK 498
                    P   G          +HG+L+  +G +++   P   ++  E+ + +++   
Sbjct: 349 ---------PAHAGQAGAILDLAAEHGLLLLQAGPDVLRFVPALNLTDAELADGLARLRL 399

Query: 499 ALKA 502
           AL  
Sbjct: 400 ALAD 403

Length = 408

>gnl|CDD|180174 PRK05630, PRK05630, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

 Score =  187 bits (476), Expect = 5e-54
 Identities = 124/438 (28%), Positives = 214/438 (48%), Gaps = 44/438 (10%)

Query: 76  WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY 135
           + +  V   ++  ++G ++   +G   +D+++  W  A G   PRL AAA  Q++T+  +
Sbjct: 16  YAAPGVRNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMS-H 74

Query: 136 HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 195
             F   T +P++ L ++LL + T + +  VF+++SGS + +  +K+   Y+   G P + 
Sbjct: 75  VMFGGLTHEPAIKLTRKLLNL-TDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERT 133

Query: 196 KFIARQKSYHGSTLIAASL----SGLPAL------HQKFDLPAPFVLHTDCPHYWRYAHP 245
           + +  +  YHG T  A S+     G+ +L       Q F  PAP V         R + P
Sbjct: 134 RLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIF-APAPPV---------RGSSP 183

Query: 246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKY 304
            E           +LE LI     ET+AA I EP++ GAGG+        E V+ +  K+
Sbjct: 184 QEIS-----EYLRSLELLI----DETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKH 234

Query: 305 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHS 364
           DIL IADE+   FGR G +F      + PD++   KAL+  +M   A L + +V+++I S
Sbjct: 235 DILLIADEIATGFGRTGELFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLI-S 293

Query: 365 QSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPII 424
             N  G+  HG T+  +P++CAVA  +L+I +     +QV +I  +   G+   +  P +
Sbjct: 294 TPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRIEAELIAGLSPLAHLPGV 353

Query: 425 GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIM 484
            ++R  G I   E        +P   E    A        HG+ +R  G  + + PP+I 
Sbjct: 354 ADVRVLGAIGVVEME------QPVDMEEATQAAV-----DHGVWLRPFGRLVYVMPPYIT 402

Query: 485 SPEEVDELISKYGKALKA 502
           + E++ ++ +    A+KA
Sbjct: 403 TSEQIAQICAALAAAVKA 420

Length = 422

>gnl|CDD|179736 PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional

 Score =  182 bits (464), Expect = 1e-52
 Identities = 125/432 (28%), Positives = 202/432 (46%), Gaps = 67/432 (15%)

Query: 82  HPL--VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSF 138
           HPL  VI ++EG +V D  G +Y+D L+       G   P+++ A   Q + +     +F
Sbjct: 20  HPLPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRAF 79

Query: 139 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRPNKKK 196
            +    P  +   +L      +    V   N+G+EA +T +K    W Y+     PNK +
Sbjct: 80  HSDQLGPWYEKVAKL------TGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAE 133

Query: 197 FIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 256
            IA + ++HG T+ A SLS      + F    P +             PG  +  Y    
Sbjct: 134 IIACEGNFHGRTMAAVSLSSEEEYKRGF---GPML-------------PGIKKIPYG--- 174

Query: 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 316
             +LE L     P T AAF+ EP+ G  G+  PP  + +  + + K+ ++LFIADE+   
Sbjct: 175 --DLEALKAAITPNT-AAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTG 231

Query: 317 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF---S 373
            GR G +F CD  ++ PD+    KAL     PI  +  + ++          LG F   S
Sbjct: 232 LGRTGKLFACDWDNVTPDMYILGKALGGGVFPISCVAANRDI----------LGVFTPGS 281

Query: 374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI 433
           HG T+ G+P++CAV+I AL++ +E  + E+  ++   F++ +K   D+P+I E+RG GL 
Sbjct: 282 HGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEI-DNPMIKEVRGRGLF 340

Query: 434 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEK---HGMLVRVSGDN-IMMSPPFIMSPEEV 489
           +G E       NEP  P           CE     G+L + + +  I  +PP +++ EE+
Sbjct: 341 IGVEL------NEPARP----------YCEALKEEGLLCKETHETVIRFAPPLVITKEEL 384

Query: 490 DELISKYGKALK 501
           D    K    L 
Sbjct: 385 DWAFEKIKAVLS 396

Length = 396

>gnl|CDD|183486 PRK12381, PRK12381, bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

 Score =  179 bits (457), Expect = 2e-51
 Identities = 129/435 (29%), Positives = 210/435 (48%), Gaps = 74/435 (17%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           P +  + EGS ++D  GK+Y+D   G+   ALG + P L  A   Q +   F+H+    T
Sbjct: 22  PFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASK--FWHTGNGYT 79

Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
            +P L LAK+L++   A+   +VFF NSG+EAN+  +KL   Y +     +K   +A + 
Sbjct: 80  NEPVLRLAKKLID---ATFADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKN 136

Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE- 261
           ++HG TL   S  G P   Q F  P P               P      Y     N+L  
Sbjct: 137 AFHGRTLFTVSAGGQPKYSQDF-APLP---------------PDIRHAAY-----NDLNS 175

Query: 262 --DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319
              LI     +   A I EP+ G GGVIP    + + ++ +  +++ L I DEV    GR
Sbjct: 176 ASALI----DDQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGR 231

Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
            G ++    Y + PD+++ AKAL   + PIGA+L + + + V+     T+G  +HG TY 
Sbjct: 232 TGELYAYMHYGVTPDVLTTAKALGGGF-PIGAMLTTEKCASVM-----TVG--THGTTYG 283

Query: 380 GHPVSCAVAIEALKI---------YKERN--IVEQVNKIAPKFQDGVKAFSDSPIIGEIR 428
           G+P++ AVA + L++          K+R+   VE++N I  ++      FS      EIR
Sbjct: 284 GNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINARYG----LFS------EIR 333

Query: 429 GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVSGDNIM-MSPPFIMSP 486
           G GL++G               E+   A   +Q   K G++V ++G N++  +P   +S 
Sbjct: 334 GLGLLIGCVLN----------AEYAGKAKQISQEAAKAGVMVLIAGPNVVRFAPALNISE 383

Query: 487 EEVDELISKYGKALK 501
           EE+   + ++ +A +
Sbjct: 384 EEITTGLDRFARACE 398

Length = 406

>gnl|CDD|177748 PLN00144, PLN00144, acetylornithine transaminase

 Score =  177 bits (450), Expect = 1e-50
 Identities = 124/434 (28%), Positives = 191/434 (44%), Gaps = 71/434 (16%)

Query: 86  IEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP----FYHSFWNR 141
               +G  +YDV GK+YLD  AG+   ALG  +P  V A   Q  TL      YH     
Sbjct: 1   FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNVYH----- 55

Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK----- 196
            T P ++LAK L+    A +   VFF NSG+EAN+  +K    Y        K       
Sbjct: 56  -TIPQVELAKRLVASSFADR---VFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSA 111

Query: 197 --FIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254
             F++   S+HG TL A +L+        F    P +             PG T  EY  
Sbjct: 112 TEFVSFSNSFHGRTLGALALTSKEQYRTPF---EPLM-------------PGVTFVEY-- 153

Query: 255 RLANNLE---DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 311
               NLE    LI K      AA   EPV G GG+ P    + + ++A+  +   L + D
Sbjct: 154 ---GNLEAARKLIQKG---KTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFD 207

Query: 312 EVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS 371
           EV C  GR G ++  + Y ++PD+++ AK L+   +PIGA+LV+ +V+  I+        
Sbjct: 208 EVQCGLGRTGYLWAHEAYGVEPDIMTLAKPLAGG-LPIGAVLVTEKVASAINPG------ 260

Query: 372 FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRGT 430
             HG T++G P+ C  A+  L    +   +  V K     ++ ++     +P + E+RG 
Sbjct: 261 -DHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGV 319

Query: 431 GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--GDNIMMSPPFIMSPEE 488
           GL++G +      P                 C   G+LV  +  GD + + PP ++S  E
Sbjct: 320 GLLVGIQLDVPAGP-------------LVDACRDSGLLVLTAGKGDVVRLVPPLVISEAE 366

Query: 489 VDELISKYGKALKA 502
           +++ +      L A
Sbjct: 367 LEQAVEILADCLPA 380

Length = 382

>gnl|CDD|129783 TIGR00700, GABAtrnsam, 4-aminobutyrate aminotransferase, prokaryotic type

 Score =  177 bits (450), Expect = 3e-50
 Identities = 113/426 (26%), Positives = 190/426 (44%), Gaps = 27/426 (6%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           P+   ++EG+ + DV+G + +D  +G+    +G S PR+V A   Q+    F H+ +  T
Sbjct: 16  PVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAE--FTHTCFMVT 73

Query: 143 TKPS-LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
                + LA++L  +   S   K  F NSG+EA +  VK+   Y    GRP     +A  
Sbjct: 74  PYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYT---GRPG---VVAFD 127

Query: 202 KSYHGSTLIAASLSGLPALHQ-KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260
             +HG T +  +L+     ++  F   AP V     P+ +R     + +      LA   
Sbjct: 128 HGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYR-DGLLDKQLSTDGELAAAR 186

Query: 261 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320
              ++  G   +AA + EPV G GG I P   +   +    +++ I+FIADEV   F R 
Sbjct: 187 AIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFART 246

Query: 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG 380
           G MF C+    +PDL++ AK+L+   +P+  +    E+ +         G    G TY+G
Sbjct: 247 GAMFACEHEGPEPDLITTAKSLADG-LPLSGVTGRAEIMDAPAP-----GGL--GGTYAG 298

Query: 381 HPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFA 439
           +P++CA A+  L I +   ++E+  +I     D +       P IG++RG G ++  E  
Sbjct: 299 NPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELV 358

Query: 440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPEEVDELISKY 496
           D  +      P+ G+           G+L+   G     I   PP  +  E + E +   
Sbjct: 359 DPGTTE----PDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSEGLDIL 414

Query: 497 GKALKA 502
              L  
Sbjct: 415 CAILAD 420

This enzyme is a class III pyridoxal-phosphate-dependent aminotransferase. This model describes known bacterial examples of the enzyme. The best archaeal matches are presumed but not trusted to have the equivalent function. The degree of sequence difference between this set and known eukaryotic (mitochondrial) examples is greater than the distance to some proteins known to have different functions, and so separate models are built for prokaryotic and eukaryotic sets. E. coli has two isozymes. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase [Central intermediary metabolism, Other]. Length = 420

>gnl|CDD|180390 PRK06082, PRK06082, 4-aminobutyrate aminotransferase; Provisional

 Score =  176 bits (448), Expect = 1e-49
 Identities = 112/420 (26%), Positives = 197/420 (46%), Gaps = 27/420 (6%)

Query: 85  VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK 144
           V+  +EG Y+ DV+GKKY+D   G     LG   P ++     Q+  LPF  S    T +
Sbjct: 57  VLASAEGIYIEDVDGKKYMD-FHGNNVHQLGYGHPHVIEKVKEQMAKLPF--SPRRFTNE 113

Query: 145 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSY 204
            +++ A++L E+    ++ +V F   G+ A    +KL  +           K ++   S+
Sbjct: 114 TAIECAEKLTEI-AGGELNRVLFAPGGTSAIGMALKLARHITG------NFKVVSLWDSF 166

Query: 205 HGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLI 264
           HG++L A S+ G     Q        V     P    Y       +      A+ LE +I
Sbjct: 167 HGASLDAISVGGEACFRQGMGPLMAGVERI--PPAVSYRGAFPDADGSDVHYADYLEYVI 224

Query: 265 LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF 324
            KEG   I AFIAE V      +P  A Y+++V+ +  K+++L I DE+    GR G  F
Sbjct: 225 EKEG--GIGAFIAEAVRNTDVQVPSKA-YWKRVREICDKHNVLLIIDEIPNGMGRTGEWF 281

Query: 325 GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS 384
               Y I+PD++   K L    +PI A++   + +    +   +LG ++H       P+ 
Sbjct: 282 THQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNT---AAQISLGHYTH----EKSPLG 334

Query: 385 CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFADNKS 443
           CA A+  +++ ++  ++E+V   +   ++ +       P+IG++RG GL+ G E   ++ 
Sbjct: 335 CAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRH 394

Query: 444 PNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELISKYGKALKA 502
             E    E     Y   +C  +G+  +VS  N I +SPP I++ EE+ + ++   +A+  
Sbjct: 395 TKERAYDEAEAVLY---RCLNNGLSFKVSQGNVIQLSPPLIITREELTQALAILEEAIAK 451

Length = 459

>gnl|CDD|180441 PRK06173, PRK06173, adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

 Score =  174 bits (444), Expect = 2e-49
 Identities = 128/444 (28%), Positives = 219/444 (49%), Gaps = 49/444 (11%)

Query: 71  PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 130
           P+++      V+P  +E+++G  +   +G++ +D ++  W    G + PRL AAAT QL 
Sbjct: 17  PYSSVTDPIPVYP--VERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLA 74

Query: 131 TLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG 190
            +  +  F   T +P+++LA++LLE+   S + K+FF +SGS A +  +K+   Y  A G
Sbjct: 75  KMS-HIMFGGFTHEPAVELAQKLLEILPPS-LNKIFFADSGSVAVEVAMKMALQYQQAKG 132

Query: 191 RPNKKKFIARQKSYHGSTLIAASL------------SGLPALHQKFDLPAPFVLHTDCPH 238
              + KF   +  YHG T  A S+              LP   Q F LP P +       
Sbjct: 133 EVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPV--QYF-LPQPSI------- 182

Query: 239 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKV 297
                   +  EE++      L+DL+ ++G E IAA I EPV+ GAGG+     TY  K 
Sbjct: 183 --------KFGEEWNDEAIEPLQDLLEQKGDE-IAALILEPVVQGAGGMYFYSPTYLVKA 233

Query: 298 QAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPE 357
           + +  +Y +L I DE+   FGR G +F  +   + PD++   KAL+  Y+ + A + +  
Sbjct: 234 RELCDQYGVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEA 293

Query: 358 VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA 417
           +++ I   S     F HG T+  +P++CA+A E++++  E    + + +I  + +  +  
Sbjct: 294 IAQTI--CSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQELAP 351

Query: 418 FSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM 477
            ++   + E+R  G I   E    K P         +   F     +HG+ VR  G  + 
Sbjct: 352 AAEFDSVAEVRVLGAIGVVEM---KEPVNMAT----LQPRF----VEHGIWVRPFGKLVY 400

Query: 478 MSPPFIMSPEEVDELISKYGKALK 501
           + PPFI+SP+E+ +L S   + LK
Sbjct: 401 IMPPFIISPDELSQLTSGLLRVLK 424

Length = 429

>gnl|CDD|234848 PRK00854, rocD, ornithine--oxo-acid transaminase; Reviewed

 Score =  174 bits (442), Expect = 3e-49
 Identities = 125/423 (29%), Positives = 192/423 (45%), Gaps = 52/423 (12%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWNR 141
            +V+ + EG +V+D +G +YLD L+       G   P+++AA   Q   L     +F N 
Sbjct: 24  DVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRAFRN- 82

Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRP-NKKKFI 198
                L    E L   T S   KV   NSG+EA +T +K V  W Y    G P  + + I
Sbjct: 83  ---DQLAPLYEELAALTGSH--KVLPMNSGAEAVETAIKAVRKWGYE-VKGVPEGQAEII 136

Query: 199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258
               ++HG TL     S  P     F    PF              PG     +    A 
Sbjct: 137 VCADNFHGRTLSIVGFSTDPDARGGF---GPFT-------------PGFRVVPFGD--AE 178

Query: 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318
            LE  I    P T+A F+ EP+ G  GVI PPA YF +V+ +    ++  I DE+    G
Sbjct: 179 ALEAAI---TPNTVA-FLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLG 234

Query: 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 378
           R G +   +   I+ D+    KALS  + P+ A+L + EV  V+           HG T+
Sbjct: 235 RTGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPG-------QHGSTF 287

Query: 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEF 438
            G+P++CAVA  ALK+  E  ++E   ++   F +G+++   S I+ E+RG GL+L  E 
Sbjct: 288 GGNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLAVEL 346

Query: 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VSGDNIMMSPPFIMSPEEVDELISKYG 497
                      PE G    +    ++ G+L +      I ++PP +++ E+VD  + +  
Sbjct: 347 E----------PEAGGARQYCEALKERGLLAKDTHDHTIRLAPPLVITREQVDWALEQIA 396

Query: 498 KAL 500
           K L
Sbjct: 397 KVL 399

Length = 401

>gnl|CDD|223080 COG0001, HemL, Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

 Score =  174 bits (443), Expect = 5e-49
 Identities = 98/358 (27%), Positives = 160/358 (44%), Gaps = 65/358 (18%)

Query: 78  STDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS 137
           S   +P+ IE+ +G+Y+ DV+G +Y+D + G     LG + P +V A   QL     +  
Sbjct: 31  SVGGYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGLSF-- 88

Query: 138 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF 197
                T+  ++LA+ L+E      + KV F NSG+EA  + ++L      A     + K 
Sbjct: 89  --GAPTELEVELAELLIERV--PSIEKVRFVNSGTEATMSAIRL------ARAYTGRDKI 138

Query: 198 IARQKSYHGS-------------TLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAH 244
           I  +  YHG              TL + S  G+PA   K  L  P+              
Sbjct: 139 IKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-------------- 184

Query: 245 PGETEEEYSTRLANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK 302
                        N+LE L    +E  + IAA I EPV G  GV+PP   + E ++ + +
Sbjct: 185 -------------NDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTE 231

Query: 303 KYDILFIADEVICAFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSE 360
           ++  L I DEVI  F R+    G     Y ++PDL +  K +    +PIGA     E+ E
Sbjct: 232 EHGALLIFDEVITGF-RVA--LGGAQGYYGVEPDLTTLGKIIGGG-LPIGAFGGRAEIME 287

Query: 361 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK-IYKERNIVEQVNKIAPKFQDGVKA 417
            +      LG      T SG+P++ A  +  L+ +  E  + E+++ +  +  +G++A
Sbjct: 288 QL----APLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRA 341

Length = 432

>gnl|CDD|181189 PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

 Score =  167 bits (426), Expect = 8e-47
 Identities = 124/439 (28%), Positives = 218/439 (49%), Gaps = 40/439 (9%)

Query: 71  PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 130
           P+T+      V+P  +  +EG  +   +G++ +D ++  W    G + P+L AA  +Q++
Sbjct: 16  PYTSMTSPLPVYP--VVSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQID 73

Query: 131 TLPFYH-SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL 189
            +   H  F   T  P+++L ++L+ M T   +  VF  +SGS A +  +K+   Y  A 
Sbjct: 74  AMS--HVMFGGITHPPAIELCRKLVAM-TPQPLECVFLADSGSVAVEVAMKMALQYWQAK 130

Query: 190 GRPNKKKFIARQKSYHGSTLIAASLS----GLPALHQKFDLPAPFVLHTDCPHYWRYAHP 245
           G P +++F+  +  YHG T  A S+      + +L++ + LP          + +  A  
Sbjct: 131 GEP-RQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGY-LP---------ENLFAPAPQ 179

Query: 246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGV-IPPPATYFEKVQAVVKK 303
              + E+  R       L+     E IAA I EP++ GAGG+ I  P  + ++V+ +  +
Sbjct: 180 SRFDGEWDERDIAPFARLMAAHRHE-IAAVILEPIVQGAGGMRIYHPE-WLKRVRKLCDR 237

Query: 304 YDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIH 363
             IL IADE+   FGR G +F C+   I PD++   KAL+   M + A L + EV+E I 
Sbjct: 238 EGILLIADEIATGFGRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETI- 296

Query: 364 SQSN-TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSP 422
             SN   G F HG T+ G+P++CAVA  +L + +  +  +QV  I  + ++ +    D+P
Sbjct: 297 --SNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAPLRDAP 354

Query: 423 IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPF 482
           ++ ++R  G I   E         P      +  +F  Q    G+ +R  G  I + PP+
Sbjct: 355 MVADVRVLGAIGVVET------TRPVNMA-ALQRFFVEQ----GVWIRPFGKLIYLMPPY 403

Query: 483 IMSPEEVDELISKYGKALK 501
           I+ PE++  L +   +A++
Sbjct: 404 IILPEQLQRLTAAVNRAVQ 422

Length = 428

>gnl|CDD|132415 TIGR03372, putres_am_tran, putrescine aminotransferase

 Score =  167 bits (423), Expect = 3e-46
 Identities = 125/430 (29%), Positives = 188/430 (43%), Gaps = 53/430 (12%)

Query: 76  WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY 135
           WQ+  ++ L+          D  G +++D L G     +G   P ++AA   QL   P  
Sbjct: 61  WQAGGLNTLI----------DTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPL- 109

Query: 136 HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 195
           HS       P   L  + L   T  K+   FF NSG+E+ +  +KL   Y +  G   K 
Sbjct: 110 HS--QELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRG---KF 164

Query: 196 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255
            FIA   ++HG +L A S +  PA  + F    P   H                E     
Sbjct: 165 TFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHV----------AFGDIEAMLKA 214

Query: 256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 315
           L         K+  + +AA I EP+ G GGVI PP  Y   V+A+  ++  L I DEV  
Sbjct: 215 LNE------CKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQT 268

Query: 316 AFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHG 375
             GR G MF C+   ++PD++  AKAL    MPIGA + +  V  V+         F H 
Sbjct: 269 GMGRTGKMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFDN-----PFLHT 323

Query: 376 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-DSP-IIGEIRGTGLI 433
            T+ G+P++CA A+  +    E+N+  Q         DG +  + + P +I E RG GL+
Sbjct: 324 TTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLL 383

Query: 434 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPEEVD 490
           +  EF DN+           IG  F  +  +  +LV  + +N   I + PP  ++ E+  
Sbjct: 384 MAIEFRDNE-----------IGYAFAKELFQQNILVAGTLNNAKSIRIEPPLTITIEQCA 432

Query: 491 ELISKYGKAL 500
            +I     AL
Sbjct: 433 LVIKAAKDAL 442

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine [Central intermediary metabolism, Polyamine biosynthesis]. Length = 442

>gnl|CDD|235885 PRK06918, PRK06918, 4-aminobutyrate aminotransferase; Reviewed

 Score =  167 bits (424), Expect = 3e-46
 Identities = 115/431 (26%), Positives = 212/431 (49%), Gaps = 27/431 (6%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           P   + + G+ V DV+G +Y+D    +    +G S P++  A   Q++   + H+ +N  
Sbjct: 37  PTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQ--YIHTGFNVM 94

Query: 143 TKPS-LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
                ++LA++L  +   S   KV F NSG+EA +  VK+   Y        ++  I+  
Sbjct: 95  MYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTK------RQGIISFS 148

Query: 202 KSYHGSTLIAASL-SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260
           + +HG TL+  ++ S +      F   AP V     P+ +R    G TEE+Y   +    
Sbjct: 149 RGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPE-GLTEEQYDDFMIEEF 207

Query: 261 EDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319
           ++  + E  PETIAA + EPV G GG I P   + ++V+ +  ++ ILF+ADE+   F R
Sbjct: 208 KNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFAR 267

Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
            G  F  + + + PDL++ +K+L  A +PI  ++   E+ +   S    LG      TY+
Sbjct: 268 TGKYFAIEHFDVVPDLITVSKSL-GAGVPISGVIGRKEIMD--ESAPGELGG-----TYA 319

Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-DSPIIGEIRGTGLILGTEF 438
           G P+ CA A+  L I ++ N+ ++  ++     +  +        IG++RG G +   E 
Sbjct: 320 GSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFEL 379

Query: 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPEEVDELISK 495
             ++   E   P+  + A    +  K G+L+  +G     I +  P +++ E+++E ++ 
Sbjct: 380 VQDRKTKE---PDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTI 436

Query: 496 YGKALKATEER 506
             ++L+A  E+
Sbjct: 437 IEESLQACYEK 447

Length = 451

>gnl|CDD|129792 TIGR00709, dat, 2,4-diaminobutyrate 4-transaminases

 Score =  164 bits (417), Expect = 2e-45
 Identities = 127/445 (28%), Positives = 206/445 (46%), Gaps = 39/445 (8%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           P    K++G +V DV GK+YLD LAG    ALG + P +       L +    H+  + T
Sbjct: 22  PTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTL-DLT 80

Query: 143 TKPSLDLAKELLEMFTASKMA-KVFFTN-SGSEANDTQVKLVWYYNNALGRPNKKKFIAR 200
           T       + LL +    KM  K+ F   SG++A +  +KL   Y    GR N    I+ 
Sbjct: 81  TPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTYT---GRTN---VISF 134

Query: 201 QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR--YAHPGETEEEYSTR-LA 257
              +HG T+ A +++G         +  P V     PH +R  +   GE     S     
Sbjct: 135 SGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFE 194

Query: 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317
           N +ED+  + G +  AA I E + G GGV+  P+ + +K++ V +K+DI  I DEV   F
Sbjct: 195 NFIEDV--ESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGF 252

Query: 318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377
           GR GTMF  +   I+PD V  +KA+    +P+  +L++PE         +      H  T
Sbjct: 253 GRSGTMFAFEHAGIEPDFVVMSKAVGGG-LPLAVLLIAPEF--------DAWQPAGHTGT 303

Query: 378 YSGHPVSCAVAIEALKIYKE----RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI 433
           + G+ ++     EAL  +K+    +N  E+  +I     D +K     P IG +RG GL+
Sbjct: 304 FRGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEH---PCIGNVRGRGLM 360

Query: 434 LGTEFADNKSPNE---PFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPE 487
            G    D +   +    +P +  + A     C ++G+L+   G       +  P  +  E
Sbjct: 361 QGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCPITIDQE 420

Query: 488 EVDELISKYGKALKATEERVKELKS 512
           E +E IS++ +A+   EE + E++ 
Sbjct: 421 ECEEGISRFKQAV---EEALAEVRL 442

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase [Central intermediary metabolism, Other]. Length = 442

>gnl|CDD|235716 PRK06149, PRK06149, hypothetical protein; Provisional

 Score =  162 bits (411), Expect = 1e-42
 Identities = 127/430 (29%), Positives = 208/430 (48%), Gaps = 57/430 (13%)

Query: 81  VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ---LNTLPFYHS 137
             P  IE+    +++D+ G+ YLD +  +  T LG   PRL AAA  Q   LNT   +H 
Sbjct: 566 ADPPQIERGWRHHLFDMAGRSYLDMVNNV--TVLGHGHPRLAAAAARQWSLLNTNSRFH- 622

Query: 138 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF 197
            +    + S  LA    +      +  VF  NSGSEAND  ++L W  +   GR +    
Sbjct: 623 -YAAVAEFSERLAALAPD-----GLDTVFLVNSGSEANDLAIRLAWAAS---GRRD---V 670

Query: 198 IARQKSYHGSTLIAASLSGLPALHQKFDLPA-----PFVLHT-DCPHYWRYAHPG-ETEE 250
           ++  ++YHG T+   ++S   A     D P      P  +H  + P+ +R    G ++  
Sbjct: 671 VSVLEAYHGWTVATDAVSTSIA-----DNPQALETRPDWVHPVESPNTYRGRFRGADSAA 725

Query: 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 310
           +Y   +   LE+L        +A FI EPV G  G I  P  Y ++V A V+    + IA
Sbjct: 726 DYVRDVVAQLEELDASGRG--LAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIA 783

Query: 311 DEVICAFGRLGTMF-GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTL 369
           DEV   +GRLG  F G ++  + PD+++ AK + + + P+GA++   E++E + ++    
Sbjct: 784 DEVQVGYGRLGHYFWGFEQQGVVPDIITMAKGMGNGH-PLGAVITRREIAEALEAE---- 838

Query: 370 GSF--SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGE 426
           G F  S G    G PVSC + +  L + +E  + E   ++    +  ++A +D  P+IG 
Sbjct: 839 GYFFSSTG----GSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADRHPLIGA 894

Query: 427 IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH---GMLVRVSGD--NIM-MSP 480
           + G GL LG E   ++   EP   E        A C++    G++++ +GD  NI+ + P
Sbjct: 895 VHGMGLYLGVELVRDRQTLEPATEE------TAAICDRLLELGVIMQPTGDHLNILKIKP 948

Query: 481 PFIMSPEEVD 490
           P  +  E  D
Sbjct: 949 PLCLDRESAD 958

Length = 972

>gnl|CDD|235889 PRK06931, PRK06931, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

 Score =  156 bits (397), Expect = 2e-42
 Identities = 126/433 (29%), Positives = 203/433 (46%), Gaps = 32/433 (7%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNT-LPFYHSFWNR 141
           PL I K++G +V DV G +YLD LAG    ALG + P ++ +    L + LP  H+  + 
Sbjct: 41  PLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPL-HTL-DL 98

Query: 142 TTKPSLDLAKELLEMFTASKMAKVF-FTN-SGSEANDTQVKLVWYYNNALGRPNKKKFIA 199
           TT      ++ LL +           FT  SG++A +  +KL   Y    GR N    I+
Sbjct: 99  TTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYT---GRSN---VIS 152

Query: 200 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR--YAHPGETEEEYSTRLA 257
               YHG T  A +++G  +     +   P V     PH +R      GE   +  T   
Sbjct: 153 FSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYF 212

Query: 258 NNL-EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 316
            N  ED+  + G    AA I E + G GGV P P  + +K++ V +K+ IL I DEV   
Sbjct: 213 ENFIEDV--ESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAG 270

Query: 317 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF 376
           F R G MF  +   I+PD++  +KA+    +P+ A+L        I  + +      H  
Sbjct: 271 FARTGKMFAFEHAGIEPDIIVMSKAVGGG-LPL-AVL-------GIKKEFDAWQPGGHTG 321

Query: 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILG 435
           T+ G+ ++ A  +  LKI KE N+ +   +     +  +       P IG +RG GL++G
Sbjct: 322 TFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIG 381

Query: 436 TEFADNKSPNE---PFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPEEV 489
            E  D + P +    +P +  + A     C ++G+L+   G N   + + PP +++  E 
Sbjct: 382 IEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRNGNVVRLLPPLLITQAEC 441

Query: 490 DELISKYGKALKA 502
           +E I ++ +AL A
Sbjct: 442 EEFIDRFEQALLA 454

Length = 459

>gnl|CDD|236149 PRK08088, PRK08088, 4-aminobutyrate aminotransferase; Validated

 Score =  155 bits (393), Expect = 3e-42
 Identities = 104/382 (27%), Positives = 180/382 (47%), Gaps = 46/382 (12%)

Query: 81  VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS-FW 139
           +HP+  +++E   V+DV G++YLD   G+     G   P++VAA  AQL      H+ F 
Sbjct: 22  IHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKK--LSHTCFQ 79

Query: 140 NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 199
               +P L+L +++ +        K     +GSEA +  VK+        G       IA
Sbjct: 80  VLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSG------VIA 133

Query: 200 RQKSYHGSTLIAASLSGLPALHQK---------FDLPAPFVLHTDCPHYWRYAHPGETEE 250
              +YHG T    +L+G    +           +    P  LH            G +E+
Sbjct: 134 FTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLH------------GVSED 181

Query: 251 EYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILF 308
           +    +     + I K    PE IAA I EPV G GG       + ++++A+  ++ I+ 
Sbjct: 182 DAIASI-----ERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIML 236

Query: 309 IADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT 368
           IADEV    GR GT+F  ++  +  DL +FAK+++  + P+  +    EV + I      
Sbjct: 237 IADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIAGGF-PLAGVTGRAEVMDAI------ 289

Query: 369 LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEI 427
                 G TY+G+P++CA A+  LK++++ N++++ N +  K +DG+ A     P IG++
Sbjct: 290 -APGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDV 348

Query: 428 RGTGLILGTEFADNKSPNEPFP 449
           RG G ++  E  ++   ++P  
Sbjct: 349 RGLGAMIAIELFEDGDHSKPNA 370

Length = 425

>gnl|CDD|179636 PRK03715, argD, acetylornithine transaminase protein; Provisional

 Score =  152 bits (386), Expect = 2e-41
 Identities = 116/376 (30%), Positives = 174/376 (46%), Gaps = 85/376 (22%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ----LNTLPFYHSF 138
            +V    +GS++YD NGK+YLD + G     LG   P +V A  AQ    +N  P   +F
Sbjct: 19  DIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSP---AF 75

Query: 139 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK--- 195
           +N   +P   LA  L +    S   KVFF NSG+EAN+  +KL   +    GR +K    
Sbjct: 76  YN---EPMAKLAGLLTQ---HSCFDKVFFANSGAEANEGAIKLARKW----GRKHKNGAY 125

Query: 196 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255
           + I    S+HG TL   S SG P     F   AP V             PG  + E    
Sbjct: 126 EIITFDHSFHGRTLATMSASGKPGWDTIF---APQV-------------PGFPKAEL--- 166

Query: 256 LANNL---EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADE 312
             N++   E LI     +T+A  + EPV G GGVIP    + ++++A+ K++ +L I DE
Sbjct: 167 --NDIASVEKLI---TDKTVAVML-EPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDE 220

Query: 313 VICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF 372
           V    GR GT+F  +   I+PD+++  K +    +P+ A+L   EV+            F
Sbjct: 221 VQTGCGRTGTLFAYELSGIEPDIMTLGKGIGGG-VPLAALLAKAEVA-----------VF 268

Query: 373 SH---GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-----------F 418
                G TY+G+P+  AV +          ++ Q+  +AP F +GV+A            
Sbjct: 269 EAGDQGGTYNGNPLMTAVGVA---------VISQL--LAPGFLEGVRARGEYLKEKLLEL 317

Query: 419 SDSPIIGEIRGTGLIL 434
           S+   +   RG GL+ 
Sbjct: 318 SEERGLEGERGEGLLR 333

Length = 395

>gnl|CDD|179803 PRK04260, PRK04260, acetylornithine aminotransferase; Provisional

 Score =  151 bits (384), Expect = 3e-41
 Identities = 116/414 (28%), Positives = 189/414 (45%), Gaps = 70/414 (16%)

Query: 88  KSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 147
           K+EG+Y+ D +GKKYLD  +G+  T LG   P++  A   Q   +  +HS       P+L
Sbjct: 17  KAEGNYLIDTDGKKYLDFSSGIGVTNLG-FHPQVQQALQKQAGLI--WHS-------PNL 66

Query: 148 ---DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSY 204
               L +E+ +     K    FF NSG+EAN+  +K+      A G   K++ I  Q S+
Sbjct: 67  YLNSLQEEVAQKLIGDKDYLAFFCNSGAEANEAAIKIA---RKATG---KQEIITFQNSF 120

Query: 205 HGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLI 264
           HG T  + S +G   +   F      V     PH+  YA            + N+L + +
Sbjct: 121 HGRTFGSMSATGQDKIKDGF---GDGV-----PHF-SYA------------IFNDL-NSV 158

Query: 265 LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF 324
                +  AA + E V G  GV+P    + + +    ++  IL I DEV    GR G ++
Sbjct: 159 KALVNKNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLY 218

Query: 325 GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF---SHGFTYSGH 381
             + Y I+PD+ + AK L++  +P+GA+L          ++S+  G+F   SHG T+ G+
Sbjct: 219 AFEHYGIEPDIFTLAKGLANG-VPVGAML----------AKSSLGGAFGYGSHGSTFGGN 267

Query: 382 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV-KAFSDSPIIGEIRGTGLILGTEFAD 440
            +S A A   L I      +EQ  +     Q+ + KA  D   +  +RG G ++G E   
Sbjct: 268 KLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETTA 327

Query: 441 NKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELI 493
           + S                      G++V  +G N I + PP  ++ EE+++ I
Sbjct: 328 DLSQ-------------LVEAARDKGLIVLTAGTNVIRLLPPLTLTKEEIEQGI 368

Length = 375

>gnl|CDD|235892 PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

 Score =  152 bits (386), Expect = 9e-41
 Identities = 128/458 (27%), Positives = 205/458 (44%), Gaps = 75/458 (16%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQL-NTLPFYHSFWNR 141
           PL ++++ G YV DV G++++D LAG    ALG + P ++ A    L + LP +      
Sbjct: 46  PLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLH------ 99

Query: 142 TTKPSLDLAKELLEMFTA----------SKMAKVFFTN-SGSEANDTQVKLVWYYNNALG 190
               +LDL   + + F            ++ AK+ F   +G++A +  +KLV     A G
Sbjct: 100 ----TLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLV---KTATG 152

Query: 191 RPNKKKFIARQKSYHGSTLIAASLSG-----------LPALHQKFDLPAPFVLHTDCPHY 239
           R     F   Q  YHG +  A SL G           LP +   F LP P+     CP  
Sbjct: 153 RSTVLSF---QGGYHGMSQGALSLMGNLGPKKPLGALLPGVQ--F-LPYPY--DYRCP-- 202

Query: 240 WRYAHPGETEEEYSTR-LANNLEDLILKEGPE----TIAAFIAEPVIGAGGVIPPPATYF 294
             +   GE     +   L N L+D      PE      AA I E V G GGVIP P  + 
Sbjct: 203 --FGLGGEAGVRANLHYLENLLDD------PESGVVLPAAVILEVVQGEGGVIPAPIEWL 254

Query: 295 EKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILV 354
             ++ + ++  I  I DE+   FGR G MF  +   I PD+V  +KA       IG  L 
Sbjct: 255 RGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVLSKA-------IGGSL- 306

Query: 355 SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDG 414
            P    V     +T    +H  T+ G+ ++ A     L+  KE  + E    +  + ++ 
Sbjct: 307 -PLAVVVYREWLDTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREH 365

Query: 415 VKAF-SDSPIIGEIRGTGLILGTEFAD-NKSPN-EPFPPEWG-IGAYFGAQCEKHGMLVR 470
           ++    D P +G++RG GL+LG E  D    P+    PP  G + +    +C + G+++ 
Sbjct: 366 LRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILE 425

Query: 471 VSGDN---IMMSPPFIMSPEEVDELISKYGKALKATEE 505
           + G +   +   PP I++ E++DE+   + +A+ A   
Sbjct: 426 LGGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAAVA 463

Length = 464

>gnl|CDD|235685 PRK06058, PRK06058, 4-aminobutyrate aminotransferase; Provisional

 Score =  150 bits (382), Expect = 2e-40
 Identities = 112/430 (26%), Positives = 194/430 (45%), Gaps = 36/430 (8%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS-FWNR 141
           P+ + ++ G  V DV+G + +D  +G+  T++G S PR+V A   Q+    F H+ F   
Sbjct: 39  PVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVAR--FTHTCFMVT 96

Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
             +  + +A++L  +       +    NSG+EA +  VK+     +  GR      +   
Sbjct: 97  PYEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIA---RSYTGRQ---AVVVFD 150

Query: 202 KSYHGSTLIAASLSG--LPALHQKFDLPAPFVLHTDCPHYWRYAH-PGETEEEYSTRLAN 258
            +YHG T +  +L+   +P     F   AP V      + +R         EE + R   
Sbjct: 151 HAYHGRTNLTMALTAKSMPYKSG-FGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAIT 209

Query: 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318
            +E  +   G + +AA I EP+ G GG I P   +   +    ++  ++FIADEV   F 
Sbjct: 210 VIEKQV---GADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFA 266

Query: 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 378
           R G  F C+   I PDL++ AK ++   +P+ A+    E+ +  H     LG      TY
Sbjct: 267 RTGAWFACEHEGIVPDLITTAKGIAGG-LPLSAVTGRAEIMDAPHPGG--LGG-----TY 318

Query: 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTE 437
            G+PV+CA A+ A++  +E ++V +  +I     D ++A +     IG++RG G ++  E
Sbjct: 319 GGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIE 378

Query: 438 F--ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEVDEL 492
                   P+     E  +     A     G++V   G   + I + PP ++  E + E 
Sbjct: 379 LVKPGTTEPD----AE--LTKALAAAAHAAGVIVLTCGTYGNVIRLLPPLVIGDELLREG 432

Query: 493 ISKYGKALKA 502
           +     AL  
Sbjct: 433 LDVLEAALAD 442

Length = 443

>gnl|CDD|168145 PRK05639, PRK05639, 4-aminobutyrate aminotransferase; Provisional

 Score =  150 bits (379), Expect = 7e-40
 Identities = 119/433 (27%), Positives = 216/433 (49%), Gaps = 40/433 (9%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           PLV ++  G+ + DV+G  ++D LAG    + G S P+LV A   Q+  +   HS    T
Sbjct: 36  PLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQ--HSMIGYT 93

Query: 143 -TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
            ++ ++ +A++L E+ +  +  KV F  SGS+A D  +K+  +   +  RP    FI   
Sbjct: 94  HSERAIRVAEKLAEI-SPIENPKVLFGLSGSDAVDMAIKVSKF---STRRPWILAFIG-- 147

Query: 202 KSYHGSTLIAASLSGLPALHQK-FDLPAPFVLHTDCPHYWR-------YAHPGETEEEYS 253
            +YHG TL A S++   +  ++ F    P V+    P+ +R       Y  P    +E  
Sbjct: 148 -AYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEP----DELI 202

Query: 254 TRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 311
            R  + LE+ +      P+ +AA  AEP+ G  G++ PP  +F++++ ++ ++ IL + D
Sbjct: 203 NRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMD 262

Query: 312 EVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS 371
           EV    GR G  F  + + +KPDL+ F K ++S  M +  ++   E+ +        L S
Sbjct: 263 EVQTGIGRTGKWFASEWFEVKPDLIIFGKGVASG-MGLSGVIGRKELMD--------LTS 313

Query: 372 FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGT 430
            S   T + +PV  A A   L+I +E N+++   K+    +  +    +S  +IG++RG 
Sbjct: 314 GSALLTPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGK 373

Query: 431 GLILGTEFA-DNKSPNEPFPPEWGIGAY-FGAQCEKHGMLVRVSGDNIMMSPPFIMSPEE 488
           GL++G E   +N  P+     +    A+  G     +GM     G+ I ++PP +++ E 
Sbjct: 374 GLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSYGMF----GNVIRITPPLVITKEI 429

Query: 489 VDELISKYGKALK 501
            ++ +    +A+K
Sbjct: 430 AEKGLEIMERAIK 442

Length = 457

>gnl|CDD|236032 PRK07495, PRK07495, 4-aminobutyrate aminotransferase; Provisional

 Score =  143 bits (362), Expect = 1e-37
 Identities = 101/375 (26%), Positives = 173/375 (46%), Gaps = 44/375 (11%)

Query: 87  EKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS 146
           +++E + ++D  G++Y+D  AG+     G   PR++AA  AQL+   F H+        +
Sbjct: 27  DRAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDR--FTHTCHQVVPYEN 84

Query: 147 -LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYH 205
            + LA+ L  +       K  F  +G+EA +  VK+      A GR      IA    +H
Sbjct: 85  YVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIA---RAATGRS---AVIAFGGGFH 138

Query: 206 GSTLIAASLSGLPALHQK---------FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 256
           G T +  SL+G    ++          + +P P  LH            G + E+    L
Sbjct: 139 GRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELH------------GVSVEQSLAAL 186

Query: 257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA 316
               +  +    P+ +AA I EPV G GG  P PA + + ++ +  ++ IL IADEV   
Sbjct: 187 DKLFKADV---DPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTG 243

Query: 317 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF 376
           F R G +F  + + +  DL + AK L+  + P+ A+    E+ +         G    G 
Sbjct: 244 FARTGKLFAMEHHEVAADLTTMAKGLAGGF-PLAAVTGRAEIMDAPG-----PGGL--GG 295

Query: 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILG 435
           TY G+P+  A A   L + +E ++ E+ N++  + +  + +  ++ P I +IRG G +  
Sbjct: 296 TYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNA 355

Query: 436 TEF--ADNKSPNEPF 448
            EF  AD+  P+  F
Sbjct: 356 VEFNDADSGLPSAEF 370

Length = 425

>gnl|CDD|233100 TIGR00713, hemL, glutamate-1-semialdehyde-2,1-aminomutase

 Score =  141 bits (357), Expect = 5e-37
 Identities = 97/376 (25%), Positives = 168/376 (44%), Gaps = 45/376 (11%)

Query: 78  STDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS 137
           S    P  + + +G+Y+YDV+G +Y+D +       LG + PR+V A    L       +
Sbjct: 26  SVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALE----RGT 81

Query: 138 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF 197
            +   T+  + LAKE++    +  +  V F NSG+EA  + V+L      A G   + K 
Sbjct: 82  SYGAPTEAEILLAKEIISRVPS--VEMVRFVNSGTEATMSAVRL------ARGYTGRDKI 133

Query: 198 IARQKSYHGS--TLIAASLSGL--PALHQKFDLPAPFVLHT-DCPHYWRYAHPGETEEEY 252
           I  +  YHG    L+  + SG     L     +P  F   T   P+              
Sbjct: 134 IKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPY-------------- 179

Query: 253 STRLANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 310
                N+LE L  + +E  E IA  I EPV G  GV+PP   +   ++A+ ++Y  L I 
Sbjct: 180 -----NDLEALEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIF 234

Query: 311 DEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG 370
           DEV+  F R+      + + ++PDL +  K +    +P+GA     E+ E +  +    G
Sbjct: 235 DEVMTGF-RVALGGAQEYFGVEPDLTTLGKIIGGG-LPVGAFGGRREIMERLAPE----G 288

Query: 371 SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV-KAFSDSPIIGEIRG 429
                 T SG+P++ A  +  LK+  E  +  +++++A +  +G+ +   D+ I   +  
Sbjct: 289 PVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNR 348

Query: 430 TGLILGTEFADNKSPN 445
            G +    F + +  N
Sbjct: 349 VGSMFSLFFTEEEVTN 364

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]. Length = 423

>gnl|CDD|180426 PRK06148, PRK06148, hypothetical protein; Provisional

 Score =  145 bits (367), Expect = 6e-37
 Identities = 115/428 (26%), Positives = 191/428 (44%), Gaps = 48/428 (11%)

Query: 83   PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
            P+   +  G ++ D  G+ YLD    + C  +G + PR+VAAA  Q   L       N  
Sbjct: 607  PIKFVRGWGVWLIDNRGRAYLDCFNNV-C-HVGHAHPRVVAAAARQAARL-------NTN 657

Query: 143  TK---PSL-DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 198
            T+    ++   A+ L        +   FF NSGSEAN   ++L   +         +  I
Sbjct: 658  TRYLHDAIVAYAERLTATLPDG-LTVAFFVNSGSEANSLALRLARAHTGQ------RDAI 710

Query: 199  ARQKSYHGSTLIAASLSGLPALHQKFDLP-----APFVLHTDCPHYWRYAHPGETEEEYS 253
                +YHG+T     LS       KF+          V   + P  +R       + E+ 
Sbjct: 711  VLDHAYHGTTTELIDLSPY-----KFNRKGGKGRPDHVEVAEVPDSYR-GPERWPDAEHG 764

Query: 254  TRLANNLEDLI--LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 311
             R A ++ + I  +       A FIAE +    G I  P  Y  +V A+V+    + IAD
Sbjct: 765  RRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIAD 824

Query: 312  EVICAFGRLGT-MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG 370
            EV   FGR+G+  +  +   + PD+V+  K + + + P+GA++ + E+++   S  N + 
Sbjct: 825  EVQVGFGRVGSHWWAFETQGVVPDIVTMGKPIGNGH-PMGAVVTTREIAD---SFDNGME 880

Query: 371  SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRG 429
             F+   T+ G+PVSCA+ +  L I ++ ++     +I      G++   D   IIG++RG
Sbjct: 881  YFN---TFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRG 937

Query: 430  TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIM-MSPPFIMSP 486
             GL LG E   ++    P      I  Y      + G+L+   G  DN++ + PP I S 
Sbjct: 938  MGLFLGIELVTDRKTKAPAT---AIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSR 994

Query: 487  EEVDELIS 494
             + D L+ 
Sbjct: 995  ADADHLLE 1002

Length = 1013

>gnl|CDD|180690 PRK06777, PRK06777, 4-aminobutyrate aminotransferase; Provisional

 Score =  138 bits (349), Expect = 5e-36
 Identities = 105/359 (29%), Positives = 176/359 (49%), Gaps = 30/359 (8%)

Query: 87  EKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS 146
           E++E + ++DV G++Y+D  AG+     G   P++VAA   QL+   F H+ +      S
Sbjct: 27  ERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQ--FTHTAYQIVPYAS 84

Query: 147 -LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYH 205
            + LA+ +  +      AK  F  +G+EA +  VK+   Y    GRP     IA   ++H
Sbjct: 85  YVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYT---GRPG---VIAFGGAFH 138

Query: 206 GSTLIAASLSGLPALHQKFDLPAP-FVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLI 264
           G TL+  +L+G  A ++    P P  + H   P+       G + EE     A +  + +
Sbjct: 139 GRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPN----ELHGVSVEE-----ALSSVERL 189

Query: 265 LKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT 322
            K    P+ +AA + EP+ G GG    P  +   ++ +  ++ IL IADEV   F R G 
Sbjct: 190 FKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGK 249

Query: 323 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382
           +F  + Y +KPDL++ AK+L    MPI A++   EV +     +   G    G TY+G+P
Sbjct: 250 LFAMEYYDVKPDLITMAKSLGGG-MPISAVVGRAEVMD-----APAPGGL--GGTYAGNP 301

Query: 383 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV-KAFSDSPIIGEIRGTGLILGTEFAD 440
           ++ A A+  L +  E  + ++   +     + + KA +  P I +IR  G ++  EF D
Sbjct: 302 LAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFND 360

Length = 421

>gnl|CDD|234607 PRK00062, PRK00062, glutamate-1-semialdehyde aminotransferase; Provisional

 Score =  126 bits (320), Expect = 8e-32
 Identities = 115/467 (24%), Positives = 187/467 (40%), Gaps = 122/467 (26%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTA-----LGGSEPRLVAAATAQLNT-----L 132
           P  IE+++G+Y+YDV+G +Y+D     +  +     LG + P +V A             
Sbjct: 33  PRFIERAKGAYLYDVDGNEYID-----YVGSWGPMILGHAHPEVVEAVIEAAEKGLSFGA 87

Query: 133 PFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRP 192
           P         T+  ++LA+ ++E+  +  +  V   NSG+EA  + ++L      A G  
Sbjct: 88  P---------TELEVELAELVIELVPS--IEMVRMVNSGTEATMSAIRL------ARGYT 130

Query: 193 NKKKFIARQKSYHG---STLIAASLSGLPALHQKFDL--PAPFVLHT-DCPHYWRYAHPG 246
            + K I  +  YHG   S L+ A  SG   L        P  F  HT   P         
Sbjct: 131 GRDKIIKFEGCYHGHADSLLVKAG-SGAATLGLPDSPGVPEDFAKHTLTAP--------- 180

Query: 247 ETEEEYSTRLANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY 304
                Y     N+LE +  + +E  + IAA I EPV G  GV+PP   + E ++ +  ++
Sbjct: 181 -----Y-----NDLEAVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEH 230

Query: 305 DILFIADEVICAFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAI--------LV 354
             L I DEV+  F R+    G     Y + PDL +  K +    +P+GA          +
Sbjct: 231 GALLIFDEVMTGF-RVA--LGGAQGYYGVTPDLTTLGKIIGGG-LPVGAFGGRREIMEQL 286

Query: 355 SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDG 414
           +P            LG      T SG+P++ A  +  LK+ KE    E++  +  +  +G
Sbjct: 287 AP------------LGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEG 334

Query: 415 VK-AFSDSPIIGEIRGTGLILGTEFADNKSPN---------EPFPPEWGIGAYFGAQCEK 464
           +K A   + I   +   G + G  F D    N         E F        +F      
Sbjct: 335 LKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERF------ARFF------ 382

Query: 465 HGMLVRVSGDNIMMSPP------FI---MSPEEVDELISKYGKALKA 502
           H ML    G  +    P      F+    + E++++ +    KA  A
Sbjct: 383 HAMLDE--GVYL---APSQFEAGFVSAAHTDEDIEKTLEAARKAFAA 424

Length = 426

>gnl|CDD|233853 TIGR02407, ectoine_ectB, diaminobutyrate--2-oxoglutarate aminotransferase

 Score =  121 bits (305), Expect = 5e-30
 Identities = 105/428 (24%), Positives = 181/428 (42%), Gaps = 63/428 (14%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           P V EK++GS ++D +GK+Y+D  AG      G + P+L  A    L      HS     
Sbjct: 18  PTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHS----- 72

Query: 143 TKPSLDLA----KELLEMFTASKMA------KVFFTN-SGSEANDTQVKLVWYYNNALGR 191
               LD+A    +E LE F    +       KV F   +G+ A ++ +KL        GR
Sbjct: 73  ----LDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLA---RKVTGR 125

Query: 192 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 251
            N    ++   ++HG TL + S++G     Q   +P   V       Y         + +
Sbjct: 126 SN---VVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYL------GGDVD 176

Query: 252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 311
                   LED     G +  AA I E V G GG+      + ++++ + +++DIL I D
Sbjct: 177 TIAYFEKLLEDS--SSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVD 234

Query: 312 EVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS 371
           ++    GR GT F  +   I+PD+V  +K++S   +P+   L+ PE+        +    
Sbjct: 235 DIQAGCGRTGTFFSFEPAGIEPDIVCLSKSISGYGLPLALTLIKPEL--------DVWKP 286

Query: 372 FSHGFTYSGHPVSCAVAIEALKIY-----KERNIVEQVNKIAPKFQDGVKAFSDSPIIGE 426
             H  T+ G+ ++   A  AL+ Y      E+ +  +   I  +    V  + +  +I +
Sbjct: 287 GEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAEYPE--LIKQ 344

Query: 427 IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFI 483
           +RG GL+ G E  D             +         ++G+++  SG N   I + PP  
Sbjct: 345 VRGRGLMQGIECGDG-----------DLAGKIAKAAFENGLIIETSGPNDEVIKLLPPLT 393

Query: 484 MSPEEVDE 491
           +  E + +
Sbjct: 394 IDEETLQQ 401

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore (SP|Q9Z3R2) or 1,3-diaminopropane (SP|P44951) biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance [Cellular processes, Adaptations to atypical conditions]. Length = 412

>gnl|CDD|101376 PRK04013, argD, acetylornithine/acetyl-lysine aminotransferase; Provisional

 Score =  120 bits (301), Expect = 7e-30
 Identities = 107/411 (26%), Positives = 178/411 (43%), Gaps = 72/411 (17%)

Query: 84  LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTT 143
           L + + EG YV+D  G++YLD +AG+    LG + P  V   + QL  L      +    
Sbjct: 8   LRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGPMFEHEE 67

Query: 144 KPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
           K      +E+LE  +       V+  NSG+EA +  +K    Y    GR   K+ IA   
Sbjct: 68  K------EEMLEELSKWVNYEYVYMGNSGTEAVEAALKFARLYT---GR---KEIIAMTN 115

Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 262
           ++HG T+ A S +  P   + F+   P V             PG     +     N++E 
Sbjct: 116 AFHGRTMGALSATWKPKYREDFE---PLV-------------PGFKHIPF-----NDVE- 153

Query: 263 LILKEG-PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321
              KE   +  AA I EP+ G GG++P    + + ++ + +    L IADEV     R G
Sbjct: 154 -AAKEAITKETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTG 211

Query: 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 381
                + Y ++PD+V+  K + +  +P+   L + +V               HG T+ G+
Sbjct: 212 KFLAIEHYKVEPDIVTMGKGIGNG-VPVSLTLTNFDVER-----------GKHGSTFGGN 259

Query: 382 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADN 441
           P++C      L+I +   +VE   K   KF +         ++   RG GL++G      
Sbjct: 260 PLACKAVAVTLRILRRERLVE---KAGEKFIE----IKGERVV-TTRGRGLMIGIVL--- 308

Query: 442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDE 491
           K P         +G Y   + +  G LV  +G  ++ + PP I+S + ++E
Sbjct: 309 KKP---------VGKYV-EELQNRGYLVHTAGQRVIRLLPPLIISKDTMEE 349

Length = 364

>gnl|CDD|182078 PRK09792, PRK09792, 4-aminobutyrate transaminase; Provisional

 Score =  120 bits (302), Expect = 1e-29
 Identities = 100/359 (27%), Positives = 170/359 (47%), Gaps = 28/359 (7%)

Query: 89  SEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS-L 147
           +E + + DV G +Y+D  AG+     G   P LVAA   QL    F H+ +      S +
Sbjct: 29  AENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQ--FTHTAYQIVPYESYV 86

Query: 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGS 207
            LA+++  +   S  AK  F  +G+EA +  VK+   +    GRP     IA    +HG 
Sbjct: 87  TLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHT---GRPG---VIAFSGGFHGR 140

Query: 208 TLIAASLSGLPALHQKFDLPAP-FVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILK 266
           T +  +L+G  A ++    P P  V H          +P +     +    + +E L   
Sbjct: 141 TYMTMALTGKVAPYKIGFGPFPGSVYHV--------PYPSDLHGISTQDSLDAIERLFKS 192

Query: 267 E-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG 325
           +   + +AA I EPV G GG    P      ++ +  ++ I+ IADEV   F R G +F 
Sbjct: 193 DIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFA 252

Query: 326 CDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC 385
            D Y+ KPDL++ AK+L+   MP+  ++ +  + +        LG      TY+G+P++ 
Sbjct: 253 MDHYADKPDLMTMAKSLAGG-MPLSGVVGNANIMDA--PAPGGLGG-----TYAGNPLAV 304

Query: 386 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFADNKS 443
           A A   L I  + ++ E+ N++  + ++ +    +S P I  +RG G ++  EF D ++
Sbjct: 305 AAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQT 363

Length = 421

>gnl|CDD|183493 PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase; Provisional

 Score =  107 bits (270), Expect = 3e-25
 Identities = 101/348 (29%), Positives = 160/348 (45%), Gaps = 48/348 (13%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           P+V+E+ +G+Y YDV+G KY+D LA       G + P +  A T        Y +     
Sbjct: 36  PVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLYGT----P 91

Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
           T+  ++ AK L E   +  + KV F NSG+EA  T +++   Y    GR    KF     
Sbjct: 92  TELEIEFAKMLKEAIPS--LEKVRFVNSGTEAVMTTIRVARAYT---GRTKIIKFAG--- 143

Query: 203 SYHGST---LIAASLSGLPALHQKFDLPAPFVLHT-DCPHYWRYAHPGETEEEYSTRLAN 258
            YHG +   L+AA  SG            P  L T D         P    +E  T   N
Sbjct: 144 CYHGHSDLVLVAAG-SG------------PSTLGTPDSA-----GVPKSIAQEVITVPFN 185

Query: 259 NLEDL---ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 315
           ++E L   + K G E +AA + EP++G  G++ P   + E V  +  +   L I DEVI 
Sbjct: 186 DIEALKEALDKWGDE-VAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVIT 244

Query: 316 AFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS 373
           AF R   M+G   D   ++PDL +  K +    +PIGA     ++ E    Q   LG   
Sbjct: 245 AF-RF--MYGGAQDLLGVEPDLTALGKIIGGG-LPIGAYGGRKDIME----QVAPLGPAY 296

Query: 374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS 421
              T +G+P S A  I  L++ ++  + E+++++    ++G+   ++ 
Sbjct: 297 QAGTMAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEK 344

Length = 428

>gnl|CDD|236437 PRK09264, PRK09264, diaminobutyrate--2-oxoglutarate aminotransferase; Validated

 Score =  102 bits (256), Expect = 2e-23
 Identities = 115/438 (26%), Positives = 192/438 (43%), Gaps = 83/438 (18%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTAL--GGSEPRLVAAATAQLNTLPFYHSFWN 140
           P+V +K++GS++YD +GK+Y+D  AG    AL  G + P L  A    L      H    
Sbjct: 22  PVVFDKAKGSWLYDEDGKEYIDFFAG--AGALNYGHNNPVLKQALIDYLQRDGITHG--- 76

Query: 141 RTTKPSLDLA----KELLEMFTASKMA------KVFFTN-SGSEANDTQVKLVWYYNNAL 189
                 LD+     +E LE F  + +       KV FT  +G+ A +  +KL        
Sbjct: 77  ------LDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLA---RKVT 127

Query: 190 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE 249
           GR N    +A    +HG TL + +++G     Q   +P   V     P Y  Y       
Sbjct: 128 GRTN---IVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRM--P-YDGYFGGDVDT 181

Query: 250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI 309
             Y  +L   LED     G +  AA I E V G GG+    A + +++  + +K+DIL I
Sbjct: 182 LAYLEKL---LEDS--SSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLI 236

Query: 310 ADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTL 369
            D++    GR GT F  ++  I PD+V+ +K++S   +P+  +L+ PE+      + N  
Sbjct: 237 VDDIQAGCGRTGTFFSFERAGITPDIVTLSKSISGYGLPMALVLIKPELDVWKPGEHN-- 294

Query: 370 GSF---SHGFTYSGHPVSCAVAIE----------ALKIYKERNIVEQVNKIAPKFQDGVK 416
           G+F   +  F      V+   A+E           +K  K   + E++ +IA K+     
Sbjct: 295 GTFRGNNLAF------VTATAALEEYWSDDAFEKEVK-AKGELVRERLEEIAAKY----- 342

Query: 417 AFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN- 475
                 +  E+RG G++ G +F D             +     A+  ++G+++  SG   
Sbjct: 343 ----PGLGAEVRGRGMMQGIDFGDG-----------ELAGKIAAEAFENGLIIETSGPED 387

Query: 476 --IMMSPPFIMSPEEVDE 491
             + + PP  +  EE++E
Sbjct: 388 EVVKLLPPLTIDEEELEE 405

Length = 425

>gnl|CDD|236224 PRK08297, PRK08297, L-lysine aminotransferase; Provisional

 Score =  102 bits (256), Expect = 2e-23
 Identities = 115/464 (24%), Positives = 180/464 (38%), Gaps = 81/464 (17%)

Query: 79  TDVHPLV--IEKSEGSYVYDVN-GKKYLDSLAGLWCTALGGSEPRLVAA-------ATAQ 128
            D   LV  +E+S+GSY+ D   G++YLD       +ALG + P L            A 
Sbjct: 21  VDGFDLVLDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAA 80

Query: 129 LNTLPFYHSFWNRTTKPSL-DLAKELLEMF--TASKMA------KVFFTNSGSEA--NDT 177
           LN             KPS  D+    +  F  T +++        +FF + G+ A  N  
Sbjct: 81  LN-------------KPSNSDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENAL 127

Query: 178 QVKLVW--YYNNALGRPNKK--KFIARQKSYHGSTLIAASLSG-LPALHQ---KFDLPAP 229
           +V   W    N A G       K +  + ++HG +    SL+   P       KFD P  
Sbjct: 128 KVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWP-- 185

Query: 230 FVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDL--ILKEGPETIAAFIAEPVIGAGGVI 287
                D P   R+  PGE  EE     A  L       +  P  IA FIAEP+ G GG  
Sbjct: 186 ---RIDNPKL-RFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDN 241

Query: 288 PPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYM 347
                +F  ++ +  ++D L I DEV    G  GT +   +  ++PD+V+F K       
Sbjct: 242 HFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKK-----T 296

Query: 348 PIGAILVSPEVSEV---IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV 404
            +  I+    V EV   + + S+ + S     T+ G+ V    A   L++ +E  +VE  
Sbjct: 297 QVCGIMAGRRVDEVEDNVFAVSSRINS-----TWGGNLVDMVRARRILEVIEEDGLVENA 351

Query: 405 NKIAPKFQDG----VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGA 460
            +               F    ++  +RG GL+   +       +E              
Sbjct: 352 ARQGEYLLARLEELAAEFPA--VVSNVRGRGLMCAFDLPTTADRDE-----------VIR 398

Query: 461 QCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELISKYGKALKAT 503
           +  + G+LV   G+  I   P   ++ EE+D  I    +AL   
Sbjct: 399 RLWEEGVLVLPCGERSIRFRPALTVTTEEIDAAIDALRRALPEV 442

Length = 443

>gnl|CDD|180471 PRK06209, PRK06209, glutamate-1-semialdehyde 2,1-aminomutase; Provisional

 Score =  101 bits (254), Expect = 3e-23
 Identities = 91/353 (25%), Positives = 144/353 (40%), Gaps = 73/353 (20%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           P  I++  G++V+DV+G +Y++   GL    LG + P +V A    L             
Sbjct: 31  PGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREAL-------QDGCNF 83

Query: 143 TKPS---LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYN--NALGRPNKKKF 197
           T+PS   LD A+  LE+   + M K  F  +GS+A    V+L   Y   + + R     F
Sbjct: 84  TRPSAIELDAAESFLELIDGADMVK--FCKNGSDATSAAVRLARAYTGRDLVARCADHPF 141

Query: 198 IARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257
            +    + G+T ++A   G+PA      L   F          RY               
Sbjct: 142 FSTDDWFIGTTPMSA---GIPASVS--ALTVTF----------RY--------------- 171

Query: 258 NNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 315
           N++  L  + ++ P  IA  I EP         P   +  +V+ +  +   LFI DE+I 
Sbjct: 172 NDIASLEALFEDHPGRIACVILEPATAD----EPQDGFLHEVRRLCHENGALFILDEMIT 227

Query: 316 AFGRLGTMFGCDKYSIKPDLVSFAKALS-----SA------YMPIGAILVSPEVSEVIHS 364
            F R         Y I PDL  F KAL      SA      YM +G +  +    E +  
Sbjct: 228 GF-RWHMRGAQKLYGIVPDLSCFGKALGNGFAVSALAGKREYMELGGLEHTDR--ERVFL 284

Query: 365 QSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA 417
            S T G+ +H           A AI  + IY++ +++E++++   K   GV  
Sbjct: 285 LSTTHGAETHAL---------AAAIATMAIYRDEDVIERLHEQGAKLAAGVNE 328

Length = 431

>gnl|CDD|132295 TIGR03251, LAT_fam, L-lysine 6-transaminase

 Score = 92.9 bits (231), Expect = 3e-20
 Identities = 107/457 (23%), Positives = 174/457 (38%), Gaps = 75/457 (16%)

Query: 79  TDVHPLV--IEKSEGSYVYDVN-GKKYLDSLAGLWCTALGGSEPRLV--AAATAQLNTLP 133
           TD   LV  +++S GS + D   G++YLD  +     ALG + P LV   A  A+L    
Sbjct: 14  TDGFDLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAA 73

Query: 134 FYHSFWNRTTKPS-LDLAKELLEMFTAS--------KMAKVFFTNSGSEA--NDTQVKLV 182
                     KPS  D+    +  F  +         +  +FF   G+ A  N  +    
Sbjct: 74  V--------NKPSNSDVYTVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFD 125

Query: 183 W--YYNNALGRPNKK--KFIARQKSYHGSTLIAASLSGL----PALHQKFDLPAPFVLHT 234
           W   +N A G P     + +  ++++HG +    SL+       A   KFD P       
Sbjct: 126 WKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWP-----RI 180

Query: 235 DCPHYWRYAHPGETEEEYSTRLANNLEDL-----ILKEGPETIAAFIAEPVIGAGGVIPP 289
           D P                  +A   E L        E P  IA FIAEP+ G GG    
Sbjct: 181 DNP----KLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHF 236

Query: 290 PATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPI 349
              +   ++A+  ++D L I DEV    G  GT +   +  ++PD+V+F K        +
Sbjct: 237 RPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKTQ-----V 291

Query: 350 GAILVSPEVSEV---IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVE---- 402
             I+    V EV   + +  + L S     T+ G+ V    A   L+I +E  +V+    
Sbjct: 292 CGIMAGRRVDEVADNVFAVPSRLNS-----TWGGNLVDMVRATRILEIIEEERLVDNARV 346

Query: 403 QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC 462
           Q   +  +  +    F    ++   RG GL+   +       +E       I   +    
Sbjct: 347 QGAHLLARLHELAAEFPH--LVSNPRGRGLMCAFDLPSTADRDEV------IRQLY---- 394

Query: 463 EKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKA 499
            +  +L+     +I   PP  ++ EE+D  I    + 
Sbjct: 395 REGVLLLGCGERSIRFRPPLTVTREEIDAAIDAIRRV 431

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites. Length = 431

>gnl|CDD|178100 PLN02482, PLN02482, glutamate-1-semialdehyde 2,1-aminomutase

 Score = 92.9 bits (231), Expect = 4e-20
 Identities = 96/343 (27%), Positives = 152/343 (44%), Gaps = 50/343 (14%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTA-LGGSEPRLVAAATAQLNTLPFYHSFWNR 141
           P+V ++ +GSY +DV+G +Y+D + G W  A +G ++  ++AA    +       SF   
Sbjct: 82  PIVFDRVKGSYAWDVDGNEYIDYV-GSWGPAIIGHADDEVLAALAETMKK---GTSF--- 134

Query: 142 TTKPSLDLAKELLEMFTAS--KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 199
              P L L   L EM   +   +  V F NSG+EA    ++L   Y        ++K I 
Sbjct: 135 -GAPCL-LENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTG------REKIIK 186

Query: 200 RQKSYHG---STLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 256
            +  YHG   S L+ A  SG+  L     LP       D P       P        T  
Sbjct: 187 FEGCYHGHADSFLVKAG-SGVATL----GLP-------DSP-----GVPKAATSATLTAP 229

Query: 257 ANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI 314
            N+LE +  + +     IAA I EPV+G  G I P   + E ++ + K+   L + DEV+
Sbjct: 230 YNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVM 289

Query: 315 CAFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF 372
             F R+   +G   + + I PDL +  K +    +P+GA     E+ E++       G  
Sbjct: 290 TGF-RIA--YGGAQEYFGITPDLTTLGKVIGGG-LPVGAYGGRREIMEMVAPA----GPM 341

Query: 373 SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV 415
               T SG+P++    I  LK  ++    E ++KI  K   G+
Sbjct: 342 YQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGI 384

Length = 474

>gnl|CDD|215526 PLN02974, PLN02974, adenosylmethionine-8-amino-7-oxononanoate transaminase

 Score = 92.1 bits (229), Expect = 1e-19
 Identities = 92/366 (25%), Positives = 142/366 (38%), Gaps = 81/366 (22%)

Query: 145 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVW--YY-------NNALGRPNKK 195
           P+L  A+ LL        ++VFF+++GS A +  +K+ +  +        N+   +    
Sbjct: 410 PALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGD 469

Query: 196 ----KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY------------ 239
               K +A   SYHG TL A           +   P+ F      P Y            
Sbjct: 470 LIELKVLALDGSYHGDTLGA----------MEAQAPSVFTGFLQQPWYSGRGLFLDPPTV 519

Query: 240 ------WRYAHP----GETEEEY---------------STRLANNLEDLILKE------- 267
                 W  + P       E E                ST LA      I ++       
Sbjct: 520 GMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEAS 579

Query: 268 -GPETIAAFIAEPVI-GAGG--VIPPPATYFEKV-QAVVKKYDILFIADEVICAFGRLGT 322
                IAA I EPV+ GAGG  +I P    F++    V +   I  I DEV     RLG 
Sbjct: 580 AKNGHIAALIIEPVLHGAGGMLLIDP---LFQRALVQVCRSRKIPVIFDEVFTGLWRLGV 636

Query: 323 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382
               +    KPD+  +AK L+   +P+ A L + EV E     S       HG +Y+ HP
Sbjct: 637 ESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALL-HGHSYTAHP 695

Query: 383 VSCAVAIEALKIYKE----RNIVEQVNKIAPKF-QDGVKAFSDSPIIGEIRGTGLILGTE 437
           + CA A +AL+ YK+     N++   +++   + ++ V+A S  P +  +   G +L  E
Sbjct: 696 MGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALE 755

Query: 438 FADNKS 443
                S
Sbjct: 756 LDAEGS 761

Length = 817

>gnl|CDD|129782 TIGR00699, GABAtrns_euk, 4-aminobutyrate aminotransferase, eukaryotic type

 Score = 88.3 bits (219), Expect = 1e-18
 Identities = 80/296 (27%), Positives = 130/296 (43%), Gaps = 50/296 (16%)

Query: 87  EKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK-- 144
           EKS G+Y+ DV+G + LD  + +    +G + P L+ AA +         +  NR     
Sbjct: 45  EKSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMA----TTLINRPALGN 100

Query: 145 -PSLDLAKELLE--MFTASK-MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIAR 200
            PS D AK L E  +  A K   +V+   SGS+AN+   K  + Y  +  R  +  F   
Sbjct: 101 FPSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEE 160

Query: 201 Q---------------------KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH- 238
           +                      ++HG    + S +    +H K D+PA      D P  
Sbjct: 161 ENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIH-KLDIPA-----FDWPQA 214

Query: 239 -YWRYAHPGE------TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPA 291
            +    +P E       +EE   R    +EDLI K+  + +AA I EP+   GG      
Sbjct: 215 PFPSLKYPLEEHVKENAKEE--QRCLEEVEDLI-KKWHKPVAAIIVEPIQSEGGDNHASP 271

Query: 292 TYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK--PDLVSFAKALSSA 345
            +F K++ + KK+++ FI DEV    G  G  +  + +++   PD+V+F+K   +A
Sbjct: 272 DFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTA 327

This enzyme is a class III pyridoxal-phosphate-dependent aminotransferase. This model describes known eukaryotic examples of the enzyme. The degree of sequence difference between this set and known bacterial examples is greater than the distance between either set the most similar enzyme with distinct function, and so separate models are built for prokaryotic and eukaryotic sets. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase [Central intermediary metabolism, Other]. Length = 464

>gnl|CDD|234803 PRK00615, PRK00615, glutamate-1-semialdehyde aminotransferase; Provisional

 Score = 77.9 bits (192), Expect = 2e-15
 Identities = 82/361 (22%), Positives = 141/361 (39%), Gaps = 49/361 (13%)

Query: 78  STDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAA--ATAQLNTLPF 134
           S  + P ++  + G    D  GK ++D   G W + + G S P++  A    A+  T   
Sbjct: 31  SVGITPPIVSSASGDIFIDSLGKTFID-FCGSWGSLIHGHSHPKICDAIQQGAERGT--- 86

Query: 135 YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 194
               +  T++  +  A+EL          K+ F +SG+EA  T V+L        GR   
Sbjct: 87  ---SYGLTSEQEILFAEELFSYLGLEDH-KIRFVSSGTEATMTAVRLA---RGITGRSII 139

Query: 195 KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254
            KF+     YHG       L G+       D     ++ TD  H    + P         
Sbjct: 140 IKFLG---CYHGHADTL--LQGISFSETSLD-TLTHLVDTDLAHPLTLSLP--------- 184

Query: 255 RLANNL---EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 311
              N+    + ++   G   +A  I EP+    GV+ P   + E +    ++   L I D
Sbjct: 185 --YNDFQIFQTVMNSLGHR-VAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMD 241

Query: 312 EVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS 371
           EV+  F R+        Y +KPD+  + K L    +P  A++    + + +       G+
Sbjct: 242 EVVTGF-RVAQGGAAAIYHVKPDITVYGKILGGG-LPAAAVVAHKSIMDHLAP----EGT 295

Query: 372 FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTG 431
                T SG+P++ A    ++ + +E+    Q++ +   F         SPI   IR  G
Sbjct: 296 IFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFL--------SPIEEMIRSQG 347

Query: 432 L 432
            
Sbjct: 348 F 348

Length = 433

>gnl|CDD|235917 PRK07046, PRK07046, aminotransferase; Validated

 Score = 50.0 bits (120), Expect = 2e-06
 Identities = 78/337 (23%), Positives = 133/337 (39%), Gaps = 86/337 (25%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCT----ALGGSEPRLVAAATAQ-----LNT-L 132
           PL + ++ G+   DV+G +Y D     +C     A+ G  P  VA A A+     L T L
Sbjct: 58  PLFVAEARGARFTDVDGHRYDD-----FCLGDTGAMFGHSPAPVARALAEQARRGLTTML 112

Query: 133 PFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL-GR 191
           P         ++ +  + +EL   F    +       + ++AN    + V  +  A+ GR
Sbjct: 113 P---------SEDAAWVGEELARRF---GLPYWQVATTATDAN----RFVLRWARAVTGR 156

Query: 192 PNKKKFIARQKSYHGS---TLI------AASLSGLPALHQKFDLPAPFVLHTDCPHYWRY 242
           P   K +     YHG+     +           GL  L Q  DL A              
Sbjct: 157 P---KILVFNGCYHGTVDDVFVDLVDGRPVQRPGL--LGQVHDLTA-------------- 197

Query: 243 AHPGETEEEYSTRLA--NNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298
                     +TR+   N+L  L   L +G   +AA +AEP +   G++ P   + E ++
Sbjct: 198 ----------TTRVVEFNDLAALEAALADG--DVAAVLAEPAMTNIGMVLPEPGFHEALR 245

Query: 299 AVVKKYDILFIADE--VICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSP 356
            + ++Y  L + DE   I + G  G       + ++PD +   K ++   +P      S 
Sbjct: 246 ELTRRYGTLLVIDETHTISS-GPGGY---TRAHGLEPDFLVVGKPIAGG-VPCAVYGFSA 300

Query: 357 EVSEVIHS--QSNTLGSFSHGFTYSGHPVSCAVAIEA 391
           E++E   +   S   G    G T S + ++ A A+ A
Sbjct: 301 ELAERAQAAKASAPPGHSGIGTTLSANALAMA-AMRA 336

Length = 453

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score = 43.1 bits (102), Expect = 2e-04
 Identities = 36/147 (24%), Positives = 55/147 (37%), Gaps = 27/147 (18%)

Query: 258 NNLEDLI--LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC 315
            + + L   LKE  E     +        G +       EK+  + K+++IL + DE   
Sbjct: 127 LDFDALEAALKEATEGNKVVLHTSPHNPTGTVATLEEL-EKLLDLAKEHNILLLVDE--- 182

Query: 316 AFGRLGTMFG-CDKYSIKPDL---------VSFAKALSSAYMPIGAILVSPEVSEVIHSQ 365
           A+   G +FG  D  + +  L          SF+KA   A   +G IL +  V       
Sbjct: 183 AYA--GFVFGSLDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNAAV------- 233

Query: 366 SNTLGSFSHGFTYSGHPVSCAVAIEAL 392
            + L   +  F  S H    A A  AL
Sbjct: 234 ISQLRKLARPFYSSTH--LQAAAAAAL 258

Length = 357

>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

 Score = 40.4 bits (95), Expect = 6e-04
 Identities = 41/212 (19%), Positives = 68/212 (32%), Gaps = 51/212 (24%)

Query: 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGS 207
           +L ++L  +       K  F  SG+ AN+  +        AL  P   + I     +   
Sbjct: 4   ELEEKLARLLQPG-NDKAVFVPSGTGANEAALL-------ALLGP-GDEVIVDANGHGSR 54

Query: 208 TLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE 267
             +AA L+G          P P              + G             LE+L   +
Sbjct: 55  YWVAAELAGAK--------PVPVP-------VDDAGYGGLDVAI--------LEEL---K 88

Query: 268 GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCD 327
               +A  +  P   +GGV+ P      +++ + K+Y IL + D                
Sbjct: 89  AKPNVALIVITPNTTSGGVLVPLK----EIRKIAKEYGILLLVDAASAGGAS-----PAP 139

Query: 328 KYSI---KPDLV--SFAKALSSAYMPIGAILV 354
              I     D+V  S  K L       G ++V
Sbjct: 140 GVLIPEGGADVVTFSLHKNL--GGEGGGVVIV 169

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V). Length = 170

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	514
PLN02760	504	4-aminobutyrate:pyruvate transaminase	100.0
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	100.0
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	100.0
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	100.0
KOG1404	442	consensus Alanine-glyoxylate aminotransferase AGT2	100.0
KOG1402	427	consensus Ornithine aminotransferase [Amino acid t	100.0
PRK07482	461	hypothetical protein; Provisional	100.0
PRK07481	449	hypothetical protein; Provisional	100.0
PRK05965	459	hypothetical protein; Provisional	100.0
PRK06105	460	aminotransferase; Provisional	100.0
PRK07480	456	putative aminotransferase; Validated	100.0
PRK07036	466	hypothetical protein; Provisional	100.0
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK07483	443	hypothetical protein; Provisional	100.0
PRK12403	460	putative aminotransferase; Provisional	100.0
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK07678	451	aminotransferase; Validated	100.0
PRK06062	451	hypothetical protein; Provisional	100.0
PRK06541	460	hypothetical protein; Provisional	100.0
PRK06917	447	hypothetical protein; Provisional	100.0
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	100.0
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	100.0
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	100.0
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	100.0
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	100.0
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	100.0
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	100.0
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	100.0
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	100.0
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	100.0
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	100.0
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	100.0
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	100.0
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	100.0
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	100.0
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	100.0
PRK04612	408	argD acetylornithine transaminase protein; Provisi	100.0
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	100.0
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	100.0
PRK08297	443	L-lysine aminotransferase; Provisional	100.0
PRK06148	1013	hypothetical protein; Provisional	100.0
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	100.0
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	100.0
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	100.0
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	100.0
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	100.0
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	100.0
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	100.0
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	100.0
PRK09792	421	4-aminobutyrate transaminase; Provisional	100.0
PRK03715	395	argD acetylornithine transaminase protein; Provisi	100.0
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	100.0
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	100.0
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	100.0
PLN02624	474	ornithine-delta-aminotransferase	100.0
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	100.0
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	100.0
PLN00144	382	acetylornithine transaminase	100.0
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	100.0
PRK06149	972	hypothetical protein; Provisional	100.0
PRK07046	453	aminotransferase; Validated	100.0
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	100.0
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	100.0
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	100.0
PRK01278	389	argD acetylornithine transaminase protein; Provisi	100.0
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	100.0
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	100.0
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	100.0
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	100.0
PRK08088	425	4-aminobutyrate aminotransferase; Validated	100.0
PRK03244	398	argD acetylornithine aminotransferase; Provisional	100.0
KOG1403	452	consensus Predicted alanine-glyoxylate aminotransf	100.0
PRK02936	377	argD acetylornithine aminotransferase; Provisional	100.0
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	100.0
PTZ00125	400	ornithine aminotransferase-like protein; Provision	100.0
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	100.0
PRK04260	375	acetylornithine aminotransferase; Provisional	100.0
PRK02627	396	acetylornithine aminotransferase; Provisional	100.0
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	100.0
KOG1405	484	consensus 4-aminobutyrate aminotransferase [Amino	100.0
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	100.0
PLN02822	481	serine palmitoyltransferase	100.0
PRK07505	402	hypothetical protein; Provisional	100.0
PRK13393	406	5-aminolevulinate synthase; Provisional	100.0
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	100.0
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	100.0
PRK09064	407	5-aminolevulinate synthase; Validated	100.0
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	100.0
PLN02955	476	8-amino-7-oxononanoate synthase	100.0
PRK07179	407	hypothetical protein; Provisional	100.0
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	100.0
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	99.98
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	99.97
PRK13392	410	5-aminolevulinate synthase; Provisional	99.97
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	99.97
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	99.97
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.96
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	99.96
KOG1358	467	consensus Serine palmitoyltransferase [Posttransla	99.95
PLN02483	489	serine palmitoyltransferase	99.95
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	99.94
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.94
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.91
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	99.9
PRK06225	380	aspartate aminotransferase; Provisional	99.9
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	99.9
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	99.9
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	99.88
PRK07682	378	hypothetical protein; Validated	99.88
PRK06108	382	aspartate aminotransferase; Provisional	99.88
PRK02731	367	histidinol-phosphate aminotransferase; Validated	99.88
PRK07324	373	transaminase; Validated	99.88
PRK13520	371	L-tyrosine decarboxylase; Provisional	99.87
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	99.87
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	99.87
PLN00175	413	aminotransferase family protein; Provisional	99.86
PLN02721	353	threonine aldolase	99.86
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	99.86
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.86
PRK06207	405	aspartate aminotransferase; Provisional	99.86
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	99.86
PRK00950	361	histidinol-phosphate aminotransferase; Validated	99.86
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.86
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	99.86
PRK01533	366	histidinol-phosphate aminotransferase; Validated	99.86
cd00609	350	AAT_like Aspartate aminotransferase family. This f	99.86
PRK10874	401	cysteine sulfinate desulfinase; Provisional	99.85
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	99.85
PRK05764	393	aspartate aminotransferase; Provisional	99.85
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	99.84
PRK09148	405	aminotransferase; Validated	99.84
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.84
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.84
PRK08636	403	aspartate aminotransferase; Provisional	99.84
PRK07366	388	succinyldiaminopimelate transaminase; Validated	99.84
PRK07681	399	aspartate aminotransferase; Provisional	99.84
PRK07309	391	aromatic amino acid aminotransferase; Validated	99.84
PRK08960	387	hypothetical protein; Provisional	99.84
PLN02656	409	tyrosine transaminase	99.84
PRK08363	398	alanine aminotransferase; Validated	99.84
PRK06348	384	aspartate aminotransferase; Provisional	99.83
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.83
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.83
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	99.83
PRK07777	387	aminotransferase; Validated	99.83
PRK09082	386	methionine aminotransferase; Validated	99.83
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	99.83
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.83
PRK07568	397	aspartate aminotransferase; Provisional	99.83
PRK08175	395	aminotransferase; Validated	99.83
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	99.83
PRK08068	389	transaminase; Reviewed	99.83
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	99.83
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	99.83
PRK12414	384	putative aminotransferase; Provisional	99.83
PRK06358	354	threonine-phosphate decarboxylase; Provisional	99.82
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	99.82
PRK08056	356	threonine-phosphate decarboxylase; Provisional	99.82
PRK06290	410	aspartate aminotransferase; Provisional	99.82
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	99.82
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	99.82
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	99.82
PRK08912	387	hypothetical protein; Provisional	99.82
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	99.82
PRK05957	389	aspartate aminotransferase; Provisional	99.82
PLN02187	462	rooty/superroot1	99.82
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	99.82
PRK08361	391	aspartate aminotransferase; Provisional	99.82
PRK02948	381	cysteine desulfurase; Provisional	99.82
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	99.82
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	99.82
PRK07683	387	aminotransferase A; Validated	99.82
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	99.82
PTZ00433	412	tyrosine aminotransferase; Provisional	99.82
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.82
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	99.81
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	99.81
PRK06107	402	aspartate aminotransferase; Provisional	99.81
PRK05942	394	aspartate aminotransferase; Provisional	99.81
PRK09105	370	putative aminotransferase; Provisional	99.81
PRK07337	388	aminotransferase; Validated	99.81
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	99.81
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	99.81
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	99.81
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	99.81
PRK03321	352	putative aminotransferase; Provisional	99.81
PTZ00377	481	alanine aminotransferase; Provisional	99.81
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	99.81
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.8
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.8
PRK10534	333	L-threonine aldolase; Provisional	99.8
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	99.8
PRK07550	386	hypothetical protein; Provisional	99.8
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.8
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	99.8
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	99.8
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.8
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.8
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	99.79
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	99.79
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	99.79
PRK09265	404	aminotransferase AlaT; Validated	99.79
PRK05839	374	hypothetical protein; Provisional	99.79
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.79
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	99.78
PRK06425	332	histidinol-phosphate aminotransferase; Validated	99.78
PLN02409	401	serine--glyoxylate aminotransaminase	99.78
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	99.78
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.78
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.78
PRK06855	433	aminotransferase; Validated	99.78
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	99.78
PRK08354	311	putative aminotransferase; Provisional	99.77
PRK06836	394	aspartate aminotransferase; Provisional	99.77
PLN02231	534	alanine transaminase	99.77
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	99.77
PLN02672	1082	methionine S-methyltransferase	99.77
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	99.76
PRK07392	360	threonine-phosphate decarboxylase; Validated	99.76
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	99.76
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	99.76
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.76
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	99.75
PLN02651	364	cysteine desulfurase	99.75
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	99.74
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	99.74
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	99.74
PRK09257	396	aromatic amino acid aminotransferase; Provisional	99.74
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.74
PTZ00376	404	aspartate aminotransferase; Provisional	99.73
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	99.73
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.73
PRK07908	349	hypothetical protein; Provisional	99.73
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	99.72
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	99.72
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.72
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	99.71
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	99.71
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	99.71
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	99.71
PRK14012	404	cysteine desulfurase; Provisional	99.7
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.7
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	99.69
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.68
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.68
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.67
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.67
PRK09275	527	aspartate aminotransferase; Provisional	99.67
PLN02397	423	aspartate transaminase	99.66
PRK04366	481	glycine dehydrogenase subunit 2; Validated	99.66
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	99.65
PRK06767	386	methionine gamma-lyase; Provisional	99.65
PRK08637	388	hypothetical protein; Provisional	99.65
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	99.64
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.64
KOG1368	384	consensus Threonine aldolase [Amino acid transport	99.63
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.63
PRK03080	378	phosphoserine aminotransferase; Provisional	99.63
PLN02242	418	methionine gamma-lyase	99.63
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.62
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	99.61
PRK02769	380	histidine decarboxylase; Provisional	99.59
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.59
PLN02368	407	alanine transaminase	99.59
PRK08249	398	cystathionine gamma-synthase; Provisional	99.57
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.57
PRK07049	427	methionine gamma-lyase; Validated	99.57
PLN03032	374	serine decarboxylase; Provisional	99.56
PRK06234	400	methionine gamma-lyase; Provisional	99.56
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.56
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.56
PRK06460	376	hypothetical protein; Provisional	99.55
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.54
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.54
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.54
PRK07582	366	cystathionine gamma-lyase; Validated	99.54
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	99.54
PRK12566	954	glycine dehydrogenase; Provisional	99.54
PRK08045	386	cystathionine gamma-synthase; Provisional	99.53
PRK05968	389	hypothetical protein; Provisional	99.53
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.53
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.53
PRK08776	405	cystathionine gamma-synthase; Provisional	99.52
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.52
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.52
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.52
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.52
PRK08574	385	cystathionine gamma-synthase; Provisional	99.51
PRK07811	388	cystathionine gamma-synthase; Provisional	99.5
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.5
PRK08861	388	cystathionine gamma-synthase; Provisional	99.5
PRK07503	403	methionine gamma-lyase; Provisional	99.5
PRK09028	394	cystathionine beta-lyase; Provisional	99.5
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.49
PRK05367	954	glycine dehydrogenase; Provisional	99.49
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.49
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.48
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.48
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.48
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	99.48
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.47
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.47
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.47
PRK07050	394	cystathionine beta-lyase; Provisional	99.47
PLN02880	490	tyrosine decarboxylase	99.46
PRK04311	464	selenocysteine synthase; Provisional	99.46
PLN02509	464	cystathionine beta-lyase	99.45
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	99.44
PLN02724	805	Molybdenum cofactor sulfurase	99.44
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.43
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.43
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.43
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.42
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.42
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	99.41
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.41
PRK08064	390	cystathionine beta-lyase; Provisional	99.4
PLN02590	539	probable tyrosine decarboxylase	99.4
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.39
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.39
PLN02263	470	serine decarboxylase	99.38
PRK05967	395	cystathionine beta-lyase; Provisional	99.38
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.38
PRK13237	460	tyrosine phenol-lyase; Provisional	99.37
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.37
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.37
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.37
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.37
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.35
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.34
PRK07671	377	cystathionine beta-lyase; Provisional	99.33
PRK05939	397	hypothetical protein; Provisional	99.33
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	99.32
PRK08114	395	cystathionine beta-lyase; Provisional	99.3
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.28
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.27
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.27
KOG0633	375	consensus Histidinol phosphate aminotransferase [A	99.27
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	99.26
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.21
PRK06434	384	cystathionine gamma-lyase; Validated	99.16
KOG0634	472	consensus Aromatic amino acid aminotransferase and	99.15
PLN02452	365	phosphoserine transaminase	99.15
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	99.12
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	99.07
PLN02271	586	serine hydroxymethyltransferase	99.05
COG3844	407	Kynureninase [Amino acid transport and metabolism]	99.03
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.03
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	99.0
PLN02414	993	glycine dehydrogenase (decarboxylating)	98.99
PRK12462	364	phosphoserine aminotransferase; Provisional	98.98
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	98.96
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	98.93
PRK05367	954	glycine dehydrogenase; Provisional	98.9
PRK15029	755	arginine decarboxylase; Provisional	98.87
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	98.85
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	98.84
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	98.77
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	98.75
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	98.72
PRK13578	720	ornithine decarboxylase; Provisional	98.69
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	98.66
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	98.64
PRK15399	713	lysine decarboxylase LdcC; Provisional	98.6
PRK15400	714	lysine decarboxylase CadA; Provisional	98.55
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	98.51
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	98.45
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	98.45
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	98.3
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	98.28
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	98.24
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	98.24
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	98.15
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	98.11
KOG0629	510	consensus Glutamate decarboxylase and related prot	98.1
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	97.94
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	97.87
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	97.85
PRK12566	954	glycine dehydrogenase; Provisional	97.68
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	97.65
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	97.19
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	96.72
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	96.7
KOG1411	427	consensus Aspartate aminotransferase/Glutamic oxal	95.73
KOG1412	410	consensus Aspartate aminotransferase/Glutamic oxal	94.57
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	93.84
KOG3843	432	consensus Predicted serine hydroxymethyltransferas	92.79
COG4100	416	Cystathionine beta-lyase family protein involved i	91.07
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	85.61

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=100.00  E-value=1.6e-92  Score=743.05  Aligned_cols=503  Identities=85%  Similarity=1.354  Sum_probs=456.4

Q ss_pred             HHHHHHHHhhHHHhhhhhhccccccccccccccccccccccccccccccccccccccccCccccCCccccccCCCCCCeE
Q 010250            6 MVTSKLLQSSLKSQIGSFTKHFSASKSLSENLYQIPLLARFYGTDASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLV   85 (514)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~   85 (514)
                      |+++++++|..+.+..|++||..++.++      ++.+.|+++++.+.+......+.++.|.+|+||+..+....+.|++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~   74 (504)
T PLN02760          1 MIARNLLRSSARSTQVNLLKHYAATASL------APASARIFSTEASLQKEDSEENGFKGHDMLAPFTAGWQSTDLEPLV   74 (504)
T ss_pred             CchhhhhhhchhhhhHHHHHHHHHhhcc------chHHHHHhccCCCccccchhhhhhccCCcccCcccccccccCCCce
Confidence            6789999999999999999999999988      5778999999999999999999999999999999998876678999


Q ss_pred             EEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeE
Q 010250           86 IEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKV  165 (514)
Q Consensus        86 ~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v  165 (514)
                      +++++|+|+||+|||+||||.+|+|+++|||+||+|++|+.+|++++.+.+.+++.++++..+|+++|++.+++.++++|
T Consensus        75 i~~~~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v  154 (504)
T PLN02760         75 IEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARKMGKV  154 (504)
T ss_pred             EEeeeeeEEEECCCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCCCCEE
Confidence            99999999999999999999999999999999999999999999998766555556788999999999998765567899


Q ss_pred             EEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCC
Q 010250          166 FFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHP  245 (514)
Q Consensus       166 ~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (514)
                      +|+|||+|||++|||+||.|+..+++++|.+||.++++|||++++++++++.+.++..|+++.+.+.++++|+.|+++.+
T Consensus       155 ~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  234 (504)
T PLN02760        155 FFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLP  234 (504)
T ss_pred             EEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCC
Confidence            99999999999999999999877787888999999999999999999999988777778877777889999999998877


Q ss_pred             CCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce
Q 010250          246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG  325 (514)
Q Consensus       246 ~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~  325 (514)
                      ....+.+...+.++|++++.+..++++|+||+||++|++|+++||++||++|+++|++||++||+|||||||||+|++|+
T Consensus       235 ~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a  314 (504)
T PLN02760        235 GETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFG  314 (504)
T ss_pred             CCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhH
Confidence            77767777777889999887666678999999999999999999999999999999999999999999999999999999


Q ss_pred             ecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHH
Q 010250          326 CDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVN  405 (514)
Q Consensus       326 ~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~  405 (514)
                      ++++|++|||+||||+|+||++|+|++++++++++.+.......+.+.|++||++||++|++++++|++++++++.++++
T Consensus       315 ~e~~gv~PDivtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~  394 (504)
T PLN02760        315 CDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVN  394 (504)
T ss_pred             HHhcCCCCcEEEecccccCCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHH
Confidence            99999999999999999999889999999999999986433223456799999999999999999999999999999999


Q ss_pred             HHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCC
Q 010250          406 KIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMS  485 (514)
Q Consensus       406 ~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t  485 (514)
                      +++++|+++|+++.+++++.+++|.|+|++++|.++.....+++.++.....+.+.|+++|+++.+.++.+||+||+++|
T Consensus       395 ~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~lrl~Ppl~it  474 (504)
T PLN02760        395 KIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAGDNIMMSPPLIIT  474 (504)
T ss_pred             HHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecCCEEEEECCCCCC
Confidence            99999999999986688999999999999999976554444444444557778899999999999888899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q 010250          486 PEEVDELISKYGKALKATEERVKELKSQQ  514 (514)
Q Consensus       486 ~e~id~~~~~l~~~l~~~~~~~~~~~~~~  514 (514)
                      ++|||+++++|++++++++++++++|+||
T Consensus       475 ~eeid~~~~~l~~al~~~~~~~~~~~~~~  503 (504)
T PLN02760        475 PEEVDELISIYGKALKATEERVAELKSQK  503 (504)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence            99999999999999999999999999975

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=100.00  E-value=2.7e-89  Score=685.36  Aligned_cols=435  Identities=41%  Similarity=0.740  Sum_probs=402.0

Q ss_pred             cCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCC
Q 010250           64 KGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTT  143 (514)
Q Consensus        64 ~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~  143 (514)
                      .....|+||++....... |.+|++++|.|+||.|||+|||..||+||+++||+||+|.+|+.+|++++++++.+ +.++
T Consensus         9 d~~~~whP~t~~~~~~~~-~~~i~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh~~~~i~~Ai~~Q~~~l~~~~~~-~~t~   86 (449)
T COG0161           9 DLSHLWHPFTQMRDPLAE-PRVIVRAEGVYLTDIDGRRYLDGMSGLWCVNHGHGRPEIAEAIKKQLDKLPHVMFG-GFTH   86 (449)
T ss_pred             hhhheecccccccccccc-ceeeeecceeEEEeCCCCEEEecccHHHHhhcCcCCHHHHHHHHHHHHhCCchhhc-ccCC
Confidence            444579999987665333 89999999999999999999999999999999999999999999999999987643 4567


Q ss_pred             chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc-C
Q 010250          144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH-Q  222 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~-~  222 (514)
                      .+..+|+++|+++.++.++++|||++|||||||.|+|+|++|++.+|++.|++||+...+|||.|++++|+++.+..+ .
T Consensus        87 ~Pa~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~  166 (449)
T COG0161          87 EPAIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHA  166 (449)
T ss_pred             chHHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhh
Confidence            779999999999986556999999999999999999999999999999999999999999999999999999955544 6


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCC-CCcccCChhHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGA-GGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~-~G~~~p~~~~L~~l~~l~  301 (514)
                      .+..+.+.+.++++|+.|+....++..++| ..++++||+++.+.+++++||||+||+.+. ||+++||++||++++++|
T Consensus       167 ~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~-~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC  245 (449)
T COG0161         167 FYDPLLPEVLHLPAPYAYRRGFFGEGDEEF-AEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREIC  245 (449)
T ss_pred             hccccccCceecCCCcccccCCCCCChHHH-HHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHH
Confidence            667778888999999999988888888888 788999999999999999999999999877 999999999999999999


Q ss_pred             HhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCc
Q 010250          302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH  381 (514)
Q Consensus       302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~  381 (514)
                      ++||||||+|||.|||||||++|+++++|++|||+|++|+|+|||+|+|++++++++.+.+....  .+.|.||+||++|
T Consensus       246 ~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~--~~~f~HG~TYsgh  323 (449)
T COG0161         246 DKYGILLIADEVATGFGRTGKMFACEHAGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGD--AGAFMHGHTYSGN  323 (449)
T ss_pred             HHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeeeecccccccchhhHhHhhhHHHHHHHhccc--CCeeccCCccccC
Confidence            99999999999999999999999999999999999999999999999999999999999998653  5789999999999


Q ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhh-ccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHH
Q 010250          382 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGA  460 (514)
Q Consensus       382 pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  460 (514)
                      |++||+|+++|++++++++.+++++.+.+|.++|++ +.++|.+++||+.|++.++++..+..++.+|  +......+..
T Consensus       324 PlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f--~~~~~~~~~~  401 (449)
T COG0161         324 PLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPF--EARVGARVRA  401 (449)
T ss_pred             HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccch--hhhHHHHHHH
Confidence            999999999999999999999999999999999998 5778999999999999999999988887777  5567888999


Q ss_pred             HHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          461 QCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       461 ~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      .++++|++++|.|+.|-++||+++|++|||++++++.++++....
T Consensus       402 ~~~e~Gl~iRp~g~~i~~~PPliit~~eid~l~~~l~~al~~~~~  446 (449)
T COG0161         402 AALERGLLIRPLGDVIYLMPPLIITREEIDELVDALREALDETLA  446 (449)
T ss_pred             HHHHCCeEEeecCCEEEEcCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999987654

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.1e-87  Score=658.51  Aligned_cols=376  Identities=34%  Similarity=0.606  Sum_probs=343.6

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++|+|+|+||.+||+||||.+|+++++|||+||+|++|+++|++++.+.+..|  .+++..+|+++|++..+  .
T Consensus        24 ~~~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~--~~~~~~~la~~L~~~s~--~   99 (404)
T COG4992          24 LPVVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLF--YNEPQAELAEKLVELSP--F   99 (404)
T ss_pred             CceeEEeccccEEECCCCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhccccc--CChHHHHHHHHHHhhCc--c
Confidence            7799999999999999999999999999999999999999999999999987765433  57888999999999863  5


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      .++|+|+|||+||||+|+|+||.|..   .++|.+||.|.++|||+|++++++++.+.|++.|.+..|.+.++|+-+   
T Consensus       100 ~d~vff~NSGaEA~EaAiKlARk~~~---~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnD---  173 (404)
T COG4992         100 ADRVFFCNSGAEANEAALKLARKYTG---DPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFND---  173 (404)
T ss_pred             ccEEEEcCCcHHHHHHHHHHHHHHcC---CCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCC---
Confidence            89999999999999999999998853   466889999999999999999999999999999997777777666532   


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                                     ++.+++++.    +++++||+|||||+||+++|+++||+++++||++||+|||+||||||+||||
T Consensus       174 ---------------i~al~~ai~----~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTG  234 (404)
T COG4992         174 ---------------IEALEAAID----EDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTG  234 (404)
T ss_pred             ---------------HHHHHHHhc----cCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccc
Confidence                           577888776    4899999999999999999999999999999999999999999999999999


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~  401 (514)
                      ++|+++|+|+.|||+|++|+|||| +|||++++++.+.+.+.       +..||+||+|||++|+++.++|+++.++++.
T Consensus       235 k~fA~e~~gV~PDI~tlaK~LgGG-~PigA~la~~~~~~~~~-------~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll  306 (404)
T COG4992         235 KLFAYEHYGVEPDILTLAKALGGG-FPIGAMLATEEIASAFT-------PGDHGSTFGGNPLACAVALAVLEVLLEEGLL  306 (404)
T ss_pred             hHHHHHHhCCCCCEEEeeccccCC-ccceeeEEchhhhhcCC-------CCcccCCCCcCHHHHHHHHHHHHHHcchhHH
Confidence            999999999999999999999999 89999999977777765       4589999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEe
Q 010250          402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS  479 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~  479 (514)
                      +++++.+++|+++|+++ .+++++.++||+|+|++++|..+.           .+..+...|.++|+++.+.+ +.|||.
T Consensus       307 ~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~-----------~a~~~~~~~~~~gvL~~~a~~~ViR~~  375 (404)
T COG4992         307 ENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPY-----------RARDIVRALREEGVLVLPAGPNVIRFL  375 (404)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcc-----------cHHHHHHHHHHCCeEEecCCCCeEEec
Confidence            99999999999999998 678899999999999999998753           14568899999999998765 579999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      ||+++|+||||+++++|+++++....
T Consensus       376 PpL~i~~eei~~~~~~l~~~l~~~~~  401 (404)
T COG4992         376 PPLVITEEEIDEALDALERALAAASA  401 (404)
T ss_pred             CCccCCHHHHHHHHHHHHHHHHHhhh
Confidence            99999999999999999999987654

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=100.00  E-value=1.2e-84  Score=656.64  Aligned_cols=402  Identities=34%  Similarity=0.609  Sum_probs=358.5

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      +|+++++++|+|+||+|||+||||.+|.++.++|||||+|++|+.+|++++.+.+..+. +.++..+++|+|.+.++..+
T Consensus        38 ~p~~~~ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~-~~e~~v~~ae~L~~~~p~~~  116 (447)
T COG0160          38 FPLVIVRAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDL-YYEPYVELAEKLTALAPGSG  116 (447)
T ss_pred             CcceEEecccCEEEeCCCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCcc-cchhHHHHHHHHHHhCCccc
Confidence            89999999999999999999999999999999999999999999999999876544332 33888999999999987557


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc-CCCCCCCCcccccCCCCcc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH-QKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~-~~~~~~~~~~~~~~~~~~~  240 (514)
                      .++++|+|||+||||+|+|+||.|      ++|..||+|.++|||+|.+++++|+....+ .+|++..+.+.++|+|++|
T Consensus       117 ~~~~~f~~sGaeA~E~AiKiAr~~------Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~y  190 (447)
T COG0160         117 LKKVFFGNSGAEAVEAAIKIARAY------TGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPY  190 (447)
T ss_pred             CCeEEecCCcHHHHHHHHHHHHHH------hCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccc
Confidence            899999999999999999999988      678999999999999999999999986554 5677777779999999999


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHH--hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG  318 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~--~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g  318 (514)
                      |++..... ++......+.+++.+.+  ..++++|+||+||+||+||.++||++||++|+++|+|||++||+||||+|||
T Consensus       191 r~p~~~~~-~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~G  269 (447)
T COG0160         191 RCPFGIGG-EECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFG  269 (447)
T ss_pred             cCcccCch-hhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence            98765433 44555556777775544  3567899999999999999999999999999999999999999999999999


Q ss_pred             cccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc
Q 010250          319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER  398 (514)
Q Consensus       319 r~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~  398 (514)
                      |||++|+++++||.|||+|+||+|+|| +|+|++++++++++ ..       +..|++||++||++|++++++|++++++
T Consensus       270 RTG~~fa~E~~gv~PDivt~aK~ig~G-~Pl~avv~r~ei~~-~~-------~g~~~~Tf~GNpva~Aaa~AvL~vie~e  340 (447)
T COG0160         270 RTGKMFAFEHFGVEPDIVTLAKSLGGG-LPLSAVVGRAEIMD-WP-------PGGHGGTFGGNPVACAAALAVLDVIEEE  340 (447)
T ss_pred             ccccchhhhhcCCCCCEEEecccccCC-CceeEEeccHHhcc-cC-------CcccCCCCCcCHHHHHHHHHHHHHHHHc
Confidence            999999999999999999999999998 89999999999999 33       3378899999999999999999999999


Q ss_pred             cHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---C
Q 010250          399 NIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---D  474 (514)
Q Consensus       399 ~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~  474 (514)
                      ++.+++.+++++++++|.++ .++|.+++|||.|+|++++|..+..+.+|   +......++..|+++|+++..+|   +
T Consensus       341 ~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p---~~~~~~~i~~~~~~~Glil~~~G~~~n  417 (447)
T COG0160         341 NLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEP---DAELAAKIVARAFERGLLLLTCGPHGN  417 (447)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCC---CHHHHHHHHHHHHHcCCEEeccCCCCc
Confidence            99999999999999999999 68999999999999999999876544432   22357789999999999988766   7


Q ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          475 NIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       475 ~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      .|||.||+++|+|++|+++++|++++.++
T Consensus       418 viRi~PPL~is~e~~d~~l~il~~al~~~  446 (447)
T COG0160         418 VLRILPPLTISDEELDEGLDILEEALKEA  446 (447)
T ss_pred             EEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence            89999999999999999999999999764

>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]

Probab=100.00  E-value=5.2e-84  Score=617.76  Aligned_cols=400  Identities=41%  Similarity=0.711  Sum_probs=372.1

Q ss_pred             CCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC
Q 010250           79 TDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT  158 (514)
Q Consensus        79 ~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~  158 (514)
                      ....|++|.+++|+|++|.+||+|||+.+|.+++++|||||+|++|+.+|+.++  +|++++..+++..+||++|++.++
T Consensus        29 ~~~~Pl~Iv~~~~~ylyDe~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l--~H~t~~~~~~pi~~~Ae~L~s~~P  106 (442)
T KOG1404|consen   29 YYKKPLVIVRGEGQYLYDEEGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKL--YHTTSGYLNPPIHDLAEALVSKLP  106 (442)
T ss_pred             cccCCceEEecceEEEEcCCCceeehhhCCeEEEEcCCCChHHHHHHHHhhhhh--EEeeccccCCcHHHHHHHHHHhCC
Confidence            345899999999999999999999999999999999999999999999999665  455666788999999999999985


Q ss_pred             cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC
Q 010250          159 ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH  238 (514)
Q Consensus       159 ~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  238 (514)
                       .+++.++|+|||+||||+|+++||.|      +++-+||.+.++|||.|..++++++.+.++..+....+++.+..+|+
T Consensus       107 -~~l~~vfF~nsGsEANelal~mar~Y------t~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pd  179 (442)
T KOG1404|consen  107 -GDLKVVFFVNSGSEANELALKMARLY------TGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPD  179 (442)
T ss_pred             -CCceEEEEecCCchHHHHHHHHHHHh------cCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCC
Confidence             57899999999999999999999999      56779999999999999999999999999988887778999999999


Q ss_pred             cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc
Q 010250          239 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG  318 (514)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g  318 (514)
                      +||..+++++.+++.....+++++++....++++|++|+|||||.||++.+|++||+++.++|+|+|.++|+||||||||
T Consensus       180 p~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfG  259 (442)
T KOG1404|consen  180 PYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFG  259 (442)
T ss_pred             cccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccc
Confidence            99999999999999999999999999998889999999999999999999999999999999999999999999999999


Q ss_pred             cccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc
Q 010250          319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER  398 (514)
Q Consensus       319 r~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~  398 (514)
                      |||.+|+++.+|+.|||+|++|+||+| +|+|+++.++||++.+.+.      ..|..||++||++|++++++|++++++
T Consensus       260 RtG~~wgfe~h~v~PDIvTmAKgiGnG-~Pl~AVvtt~EIa~v~~~~------~~~fnTyggnP~a~avg~aVL~Vikee  332 (442)
T KOG1404|consen  260 RTGHMWGFESHGVVPDIVTMAKGIGNG-FPLGAVVTTPEIADVLNQK------SSHFNTYGGNPVACAVGLAVLKVIKEE  332 (442)
T ss_pred             cccccccccccCCCccHHHHHhhccCC-CcceeeecCHHHHHHHHhc------cccccccCCCchhHHHHHHHHHHHHHH
Confidence            999999999999999999999999999 8999999999999999863      237899999999999999999999999


Q ss_pred             cHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CC
Q 010250          399 NIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GD  474 (514)
Q Consensus       399 ~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~  474 (514)
                      ++.++..+.+.+|+++|.++ .++|++++|||+|+|+++++.+++.  ++++.++.....+.+.|++.|+++..+   |+
T Consensus       333 ~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~--~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~  410 (442)
T KOG1404|consen  333 NLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKS--EPKPPATAEGAVIGEQCKELGVLVGKGGIHGN  410 (442)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccC--CCCCcchHHHHHHHHHHHHhCeeeecccccce
Confidence            99999999999999999999 6799999999999999999998764  455667777888999999999999754   57


Q ss_pred             EEEEeCCCCCCHHHHHHHHHHH
Q 010250          475 NIMMSPPFIMSPEEVDELISKY  496 (514)
Q Consensus       475 ~iRi~p~~~~t~e~id~~~~~l  496 (514)
                      .+||+||+++|+|||+.+++.+
T Consensus       411 vfriaPPlciT~edi~f~~~~~  432 (442)
T KOG1404|consen  411 VFRIAPPLCITKEDIDFAVEYF  432 (442)
T ss_pred             EEEecCCeeccHHHHHHHHHHH
Confidence            8999999999999998887766

>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.8e-83  Score=599.65  Aligned_cols=401  Identities=31%  Similarity=0.511  Sum_probs=356.8

Q ss_pred             cccccccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHH
Q 010250           50 DASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQL  129 (514)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l  129 (514)
                      ..+++...+.+++|.+||| +|          +|+++++++|+++||++|++||||.|++++++.|||||.|++|+++|.
T Consensus        20 ~~aS~~~~~~E~k~~ahny-hp----------Lpvvf~ka~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~   88 (427)
T KOG1402|consen   20 TTASQQIMERENKYGAHNY-HP----------LPVVFSKAKGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQA   88 (427)
T ss_pred             ccchhhhhchhhhcccccC-Cc----------CceEEEecCCcEEECCCccchhhhhhhhhhcccCCCCHHHHHHHHHHH
Confidence            3444557778999999996 67          999999999999999999999999999999999999999999999999


Q ss_pred             hcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHH--HHHhhcCCCCccEEEEEecCCccc
Q 010250          130 NTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVW--YYNNALGRPNKKKFIARQKSYHGS  207 (514)
Q Consensus       130 ~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~--~~~~~~~~~~~~~ii~~~~~yHG~  207 (514)
                      +++...++.+  +++...++++.+.++|   +.++|+.+|+|.||+|.|+|+||  .|..+..+..+.+|++..++|||+
T Consensus        89 ~kLtlssraf--Ynd~~~~f~~~vt~lf---~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGr  163 (427)
T KOG1402|consen   89 DKLTLSSRAF--YNDVLGEFAEYVTKLF---GYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGR  163 (427)
T ss_pred             hHhhhhhHHH--hhhhHHHHHHHHHHhc---CcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCc
Confidence            9987665432  4578899999999998   56899999999999999999995  676666666788999999999999


Q ss_pred             ceeeeecCCCccccCCCCCCCCcc-cccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCc
Q 010250          208 TLIAASLSGLPALHQKFDLPAPFV-LHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGV  286 (514)
Q Consensus       208 t~~~~~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~  286 (514)
                      |++++++|+++..+.+|+++.|++ ..+++-                  ++++|+..+..   +++++||+||+||++|+
T Consensus       164 T~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~------------------d~eale~~l~~---~~vaaFivEPIQGEaGV  222 (427)
T KOG1402|consen  164 TLGAISLSTDPDSWDGFGPFLPGVVDKVPYG------------------DAEALEVALKS---PNVAAFIVEPIQGEAGV  222 (427)
T ss_pred             eeeeEEecCCcchhhccCCCCCCcceeeccC------------------CHHHHHHHhcC---CCeeEEEeeccccccce
Confidence            999999999998889999888873 333332                  25777777763   68999999999999999


Q ss_pred             ccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhcc
Q 010250          287 IPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQS  366 (514)
Q Consensus       287 ~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~  366 (514)
                      ++||++||+++++||++|++++|+||||||+||||+++++++.++.||++.|||+|+||.+|++++++++++|..+.   
T Consensus       223 vvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la~d~env~PDivilgKalSGG~~Pvsavl~~~~im~~~~---  299 (427)
T KOG1402|consen  223 VVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLACDYENVRPDIVILGKALSGGVYPVSAVLADDDIMLNIK---  299 (427)
T ss_pred             EeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEEeehhhcCCCeEEEeccccCCeeeeEEEEecHHHHhccC---
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999887   


Q ss_pred             CCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCC
Q 010250          367 NTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSP  444 (514)
Q Consensus       367 ~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~  444 (514)
                          +..||+||++||++|++++|+|+++.++++.++..+++..|+.+|+++ .+.| ++.+|||+|++.++.+...+..
T Consensus       300 ----pgeHgsTyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~  375 (427)
T KOG1402|consen  300 ----PGEHGSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTS  375 (427)
T ss_pred             ----CCccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEecccccc
Confidence                447999999999999999999999999999999999999999999999 4554 6789999999999999865433


Q ss_pred             CCCCCCccchHHHHHHHHHHCCcEEEe-eCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          445 NEPFPPEWGIGAYFGAQCEKHGMLVRV-SGDNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       445 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~-~g~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      ..   +    +..++..|.++|++..| +++.|||+||+.++++|+++.++++++++.
T Consensus       376 ~~---~----aw~~cl~lk~~g~LAkptH~~IiRfaPPL~I~e~dl~eg~e~i~k~i~  426 (427)
T KOG1402|consen  376 GQ---D----AWDVCLALKENGLLAKPTHGNIIRFAPPLVISEEDLREGIEAIEKTIA  426 (427)
T ss_pred             ch---h----HHHHHHcccccccccCCCCCCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence            21   2    44567888999999987 467899999999999999999999998864

>PRK07482 hypothetical protein; Provisional

Probab=100.00  E-value=2.4e-81  Score=655.08  Aligned_cols=439  Identities=42%  Similarity=0.805  Sum_probs=378.3

Q ss_pred             cccCCccccccCC--CCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCc
Q 010250           67 DMLAPFTAGWQST--DVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK  144 (514)
Q Consensus        67 ~~~~p~~~~~~~~--~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~  144 (514)
                      ..|+|+++.....  ...|+++++|+|+|+||.|||+||||.+++|+++|||+||+|++|+.+|++++.+.+.....+++
T Consensus        15 ~~~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~   94 (461)
T PRK07482         15 HFFHPSTHLGDHARGELPGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTE   94 (461)
T ss_pred             hccCCcccccccccccCCCeeEEeeeeeEEEECCCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCH
Confidence            3566765432211  12489999999999999999999999999999999999999999999999998655443345788


Q ss_pred             hHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCC
Q 010250          145 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF  224 (514)
Q Consensus       145 ~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~  224 (514)
                      +..+|+++|++.++ .++++|+|++||+||||+|||+||.|+..++.++|++||.++++|||+|.+++++++.+.++..|
T Consensus        95 ~~~~lAe~L~~~~p-~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~  173 (461)
T PRK07482         95 ASITLSKRIIDRAP-AGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHF  173 (461)
T ss_pred             HHHHHHHHHHHhCC-CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhcc
Confidence            89999999999874 35789999999999999999999999877777889999999999999999999999988888888


Q ss_pred             CCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 010250          225 DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY  304 (514)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~  304 (514)
                      +++.+.+.+++.|++++.+..+...+.+...+++.+++++.+..++++|+||+||+||++|+++|+++||++|+++|++|
T Consensus       174 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~  253 (461)
T PRK07482        174 DLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKY  253 (461)
T ss_pred             CCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHh
Confidence            87777778888887777655455556677778889999886555678999999999999999999999999999999999


Q ss_pred             CCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHH
Q 010250          305 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS  384 (514)
Q Consensus       305 gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~  384 (514)
                      |++||+|||+|||||+|++|+++++|++||++|+||+|+||++|+|++++++++++.+.......+.+.|++||++||++
T Consensus       254 giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~  333 (461)
T PRK07482        254 DILLIADEVVTGFGRLGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPIC  333 (461)
T ss_pred             CCEEEEeccccCCCcCcchhhHHhcCCCCCEEEEccccccCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHH
Confidence            99999999999999999999999999999999999999999779999999999999886432223456799999999999


Q ss_pred             HHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH
Q 010250          385 CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE  463 (514)
Q Consensus       385 ~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~  463 (514)
                      |++|+++|++++++++.+++++++++|+++|+++ .+++.+.+++|.|+|++++|..+.....++.........+...|+
T Consensus       334 ~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~  413 (461)
T PRK07482        334 AAAALANLDILERENLVGNAAEVGAYFRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAAL  413 (461)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHH
Confidence            9999999999999999999999999999999987 678999999999999999997544333333222234567889999


Q ss_pred             HCCcEEEee--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250          464 KHGMLVRVS--GDNIMMSPPFIMSPEEVDELISKYGKALKATEER  506 (514)
Q Consensus       464 ~~Gv~~~~~--g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~  506 (514)
                      ++|+++.+.  ++.+||.||+++|++||++++++|+++++++.++
T Consensus       414 ~~Gvl~~~~~~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~~~  458 (461)
T PRK07482        414 ERGVIARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVDEVLGR  458 (461)
T ss_pred             HCCcEEecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            999998653  6789999999999999999999999999877443

>PRK07481 hypothetical protein; Provisional

Probab=100.00  E-value=1.6e-80  Score=647.41  Aligned_cols=439  Identities=34%  Similarity=0.668  Sum_probs=378.7

Q ss_pred             CccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCc
Q 010250           65 GHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK  144 (514)
Q Consensus        65 ~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~  144 (514)
                      ....|+||++........|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+.+.+.+++
T Consensus         7 ~~~~w~p~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~~~~~~~   86 (449)
T PRK07481          7 ARRFWHPMAHPAEMKARPPIIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEYYSTFDGTTHP   86 (449)
T ss_pred             cccccCCcccccccccCCCceEEeccccEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhccceecccccCCH
Confidence            34489999987765555789999999999999999999999999999999999999999999999987665433345788


Q ss_pred             hHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCC
Q 010250          145 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF  224 (514)
Q Consensus       145 ~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~  224 (514)
                      ...+++++|++.+++.++++|+|++||+||||+|+|+||.|++..+.++|.+||.++++|||+|.+++++++.+.++..|
T Consensus        87 ~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~  166 (449)
T PRK07481         87 RAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNY  166 (449)
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCccccccc
Confidence            89999999999875456789999999999999999999999877777788999999999999999999999887777667


Q ss_pred             CCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 010250          225 DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY  304 (514)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~  304 (514)
                      .+..+.+.+++.|+.+++++...+.+.+...+.+.+|+++....++++|+||+||+|+++|+++|+++||++|+++|++|
T Consensus       167 ~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~  246 (449)
T PRK07481        167 EPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRH  246 (449)
T ss_pred             CCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHc
Confidence            66666777777777666654423445555566778888887566678999999999999999999999999999999999


Q ss_pred             CCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHH
Q 010250          305 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS  384 (514)
Q Consensus       305 gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~  384 (514)
                      |++||+|||||||||+|++|+++++|+.|||+|+||+|+||++|+|++++++++++.+.......+.+.|++||++||++
T Consensus       247 g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~  326 (449)
T PRK07481        247 GILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVA  326 (449)
T ss_pred             CCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHH
Confidence            99999999999999999999999999999999999999999889999999999999886432112345799999999999


Q ss_pred             HHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH
Q 010250          385 CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE  463 (514)
Q Consensus       385 ~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~  463 (514)
                      |++++++|++++++++.+++++++++|+++|+++ .+++++.+++|.|+|++++|..+..+..++.........+...|+
T Consensus       327 ~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~  406 (449)
T PRK07481        327 CAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVAR  406 (449)
T ss_pred             HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHH
Confidence            9999999999999999999999999999999998 468999999999999999997543222222212234567888999


Q ss_pred             HCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          464 KHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       464 ~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ++|+++.+.++.+||+||+++|++|||+++++|++++.++
T Consensus       407 ~~Gvl~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~  446 (449)
T PRK07481        407 ENGVLVRPSGTKIILSPPLVIQREDVDRIVDALDAGLSAV  446 (449)
T ss_pred             hCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence            9999999888889999999999999999999999999765

>PRK05965 hypothetical protein; Provisional

Probab=100.00  E-value=1.8e-80  Score=648.13  Aligned_cols=436  Identities=32%  Similarity=0.623  Sum_probs=371.2

Q ss_pred             ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250           68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL  147 (514)
Q Consensus        68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~  147 (514)
                      .|+|+++........|+++++++|+|+||+|||+||||.+++|+++|||+||+|++|+.+|++++.+....+...+++..
T Consensus        14 ~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~   93 (459)
T PRK05965         14 LIHPVASYRGHEARGVTVLASAKGATLTDASGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAI   93 (459)
T ss_pred             cccccccccccccCCCceEEeeeEeEEEECCCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHH
Confidence            46676544221123578999999999999999999999999999999999999999999999987665433344678889


Q ss_pred             HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250          148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP  227 (514)
Q Consensus       148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~  227 (514)
                      +|+++|++.++ .++++|+|++||+||||.|||+||.|+..++.++|.+||.++++|||+|.+++++++.+.++..++++
T Consensus        94 ~lae~L~~~~p-~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~  172 (459)
T PRK05965         94 RLAAKLAERAP-GSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLP  172 (459)
T ss_pred             HHHHHHHhhCC-CCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCC
Confidence            99999999974 46789999999999999999999999877777888999999999999999999999887777777766


Q ss_pred             CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCE
Q 010250          228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL  307 (514)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gil  307 (514)
                      .+.+..+++|..++.+.. .+.+.+...+++++++++....++++|+||+||+|+++|+++||++||++|+++|++||++
T Consensus       173 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gil  251 (459)
T PRK05965        173 LPWQHKIPSPYPYRNPVG-DDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGIL  251 (459)
T ss_pred             CCCCEEcCCCcccccccC-CChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCE
Confidence            666666777766665432 2334455566788888887665678999999999999999999999999999999999999


Q ss_pred             EEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHH
Q 010250          308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV  387 (514)
Q Consensus       308 lI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aa  387 (514)
                      ||+|||+|||||+|++|+++++|++|||+|+||+|+||++|+|++++++++++.+.......+.+.|++||++||++|++
T Consensus       252 lI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aa  331 (459)
T PRK05965        252 FVADEVITGFGRTGPLFACEAEGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAV  331 (459)
T ss_pred             EEEechhccCccCchhhhHhhcCCCCCeEEechhhccCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHH
Confidence            99999999999999999999999999999999999999789999999999999886422112245799999999999999


Q ss_pred             HHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250          388 AIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM  467 (514)
Q Consensus       388 a~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv  467 (514)
                      ++++|++++++++.+++++++++|+++|+++.+++.+.++||.|+|++++|..+..+..++.........+...|+++|+
T Consensus       332 a~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gl  411 (459)
T PRK05965        332 GLEVLRLYHEGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGL  411 (459)
T ss_pred             HHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCe
Confidence            99999999999999999999999999999986689999999999999999975433333322222346678899999999


Q ss_pred             EEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          468 LVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       468 ~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      ++.+.+ +.||+.||+++|++||++++++|++++.++.+
T Consensus       412 l~~~~g~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~~  450 (459)
T PRK05965        412 VFRAFGDGVLGFAPALCCTEGEFDLIFERTRKTLDDVLA  450 (459)
T ss_pred             EEEecCCcEEEEECCCcCCHHHHHHHHHHHHHHHHHHhc
Confidence            999876 56999999999999999999999999987754

>PRK06105 aminotransferase; Provisional

Probab=100.00  E-value=4.2e-79  Score=638.08  Aligned_cols=438  Identities=53%  Similarity=0.961  Sum_probs=378.9

Q ss_pred             ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250           68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL  147 (514)
Q Consensus        68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~  147 (514)
                      .|+|+..........|+++++++|+|+||+|||+||||.+++|+++|||+||+|++|+.+|++++++.+.+...+++...
T Consensus        16 ~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~   95 (460)
T PRK06105         16 HLHPYTNARRHEEEGPLVIERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVI   95 (460)
T ss_pred             cccCCcccccccccCCceEEeeeEEEEEECCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHH
Confidence            45555432111123689999999999999999999999999999999999999999999999987755443234678889


Q ss_pred             HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250          148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP  227 (514)
Q Consensus       148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~  227 (514)
                      +++++|++.++ .++++|+|++||+||||+|||+||.|++.++.++|.+||.++++|||++.+++++++.+..++.++++
T Consensus        96 ~lae~L~~~~p-~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~  174 (460)
T PRK06105         96 DLAEKLVAMAP-VPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLP  174 (460)
T ss_pred             HHHHHHHHhCC-CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCC
Confidence            99999999984 45789999999999999999999998877777788999999999999999999999877777778877


Q ss_pred             CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCE
Q 010250          228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL  307 (514)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gil  307 (514)
                      .+.+.++++|+.+++..+.+..+.+...+.+++|+++.+..++++++||+||+|+++|+++|+++||++|+++|++||++
T Consensus       175 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~l  254 (460)
T PRK06105        175 LDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDIL  254 (460)
T ss_pred             CCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCe
Confidence            77788889998888766666666677777899999987665678999999999999999999999999999999999999


Q ss_pred             EEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHH
Q 010250          308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV  387 (514)
Q Consensus       308 lI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aa  387 (514)
                      ||+|||||||||+|++|+++++++.|||+|+||+|+||++|+|++++++++++.+.......+.+.|++||++||++|++
T Consensus       255 lI~DEv~tG~GRtG~~f~~~~~~v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aa  334 (460)
T PRK06105        255 LVADEVICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAV  334 (460)
T ss_pred             EEEeccccCCCcCchhhhHHhcCCCCCeeeeecccccCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHH
Confidence            99999999999999999999999999999999999999889999999999999886533223455689999999999999


Q ss_pred             HHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250          388 AIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM  467 (514)
Q Consensus       388 a~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv  467 (514)
                      ++++|++++++++.+++++++++|+++|+++.+++.+.+++|.|++++++|..+..+..++.........+...|+++|+
T Consensus       335 a~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gv  414 (460)
T PRK06105        335 ALENLAIIEERDLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGV  414 (460)
T ss_pred             HHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCe
Confidence            99999999999999999999999999999996689999999999999999975443333332222234568889999999


Q ss_pred             EEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250          468 LVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEER  506 (514)
Q Consensus       468 ~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~  506 (514)
                      ++.+.++.|||+||+++|++|||+++++|+++++++...
T Consensus       415 l~~~~g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~~  453 (460)
T PRK06105        415 ISRAMGDTLAFCPPLIITAAQVDEMVDRFGRALDDVAAW  453 (460)
T ss_pred             EEEecCCEEEEECCCccCHHHHHHHHHHHHHHHHHHHHH
Confidence            999888899999999999999999999999999887653

>PRK07480 putative aminotransferase; Validated

Probab=100.00  E-value=4.3e-78  Score=629.11  Aligned_cols=433  Identities=43%  Similarity=0.789  Sum_probs=367.4

Q ss_pred             ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250           68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL  147 (514)
Q Consensus        68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~  147 (514)
                      +|+|+...-......|+++++++|+|+||.|||+||||.+++|+.+|||+||+|++|+.+|++++.+...++...++...
T Consensus        18 ~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~   97 (456)
T PRK07480         18 HLHPFSDMKALNEKGSRVITRAEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYNTFFKTTHPPAI   97 (456)
T ss_pred             cccCcccccccccCCCceEEeceeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHH
Confidence            45665433111113578999999999999999999999999999999999999999999999987665443345788899


Q ss_pred             HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250          148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP  227 (514)
Q Consensus       148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~  227 (514)
                      +|+++|++.++ .++++|+|++||+||||.|+|+||.|+..++.++|.+||.++++|||+|++++++++.+.++..++++
T Consensus        98 ~lae~L~~~~p-~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~  176 (456)
T PRK07480         98 ELAAKLAEVAP-PGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLP  176 (456)
T ss_pred             HHHHHHHHhCC-CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCC
Confidence            99999999974 45789999999999999999999999877777788999999999999999999999876666666655


Q ss_pred             CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCE
Q 010250          228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL  307 (514)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gil  307 (514)
                      .+.+.+++.|.+++... ..+.+++...+.+.+++.+.+..++++++||+||+|+++|+++||++||++|+++|++||++
T Consensus       177 ~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~l  255 (456)
T PRK07480        177 IPGIVHIDQPYWFGEGG-DMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDIL  255 (456)
T ss_pred             CCCCeecCCCccccccc-CCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence            56677777777766543 22344555555678877776666678999999999999999999999999999999999999


Q ss_pred             EEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHH
Q 010250          308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV  387 (514)
Q Consensus       308 lI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aa  387 (514)
                      ||+|||||||||+|++|+++++|++||++||||+|+||++|+|++++++++++.+...   .+.+.|++||++||++|++
T Consensus       256 lI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~---~~~~~~~~T~~gnpl~~Aa  332 (456)
T PRK07480        256 LVADEVICGFGRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEE---GGEFNHGFTYSGHPVAAAV  332 (456)
T ss_pred             EEEechhhCCCcCcchhhhhhcCCCCCeeeeehhhccCCccceEEEEcHHHHHHHhcC---CCCcccCCCCCcCHHHHHH
Confidence            9999999999999999999999999999999999999988999999999999988421   1345789999999999999


Q ss_pred             HHHHHHHHhhccHHHHH-HHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250          388 AIEALKIYKERNIVEQV-NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG  466 (514)
Q Consensus       388 a~aal~~~~~~~~~~~~-~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G  466 (514)
                      ++++|++++++++.+++ ++++++|+++|+++.+++.+.+++|.|+|++++|.++.....++.........+...|+++|
T Consensus       333 a~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~G  412 (456)
T PRK07480        333 ALANLRILRDEGIVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANG  412 (456)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCC
Confidence            99999999999999999 69999999999998678999999999999999997543332333222123456778899999


Q ss_pred             cEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          467 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       467 v~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      +++.+.++.+||+||+++|++|||+++++|++++.++.+
T Consensus       413 ll~~~~~~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~  451 (456)
T PRK07480        413 LIMRAVGDRMIISPPLVITHAEIDELVEKARKALDATAA  451 (456)
T ss_pred             cEEeecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999887888999999999999999999999999987654

>PRK07036 hypothetical protein; Provisional

Probab=100.00  E-value=5.8e-78  Score=629.83  Aligned_cols=438  Identities=36%  Similarity=0.727  Sum_probs=372.9

Q ss_pred             cccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchH
Q 010250           67 DMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS  146 (514)
Q Consensus        67 ~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~  146 (514)
                      .+|+||.+........|+++++++|+|+||+|||+||||.+++|+++|||+||+|.+|+.+|++++.+.+.+...++++.
T Consensus        18 ~~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~   97 (466)
T PRK07036         18 HLLHPWHDFSSLGKEGSLVIVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIADQARRLPYYTPFGDMTNAPA   97 (466)
T ss_pred             ccccCccCccccccCCCceEEeCceeEEEECCCCEEEECcccHHhhcCCCCCHHHHHHHHHHHHhCcccccccccCCHHH
Confidence            35677665432222368999999999999999999999999999999999999999999999998765544322467889


Q ss_pred             HHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCC
Q 010250          147 LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDL  226 (514)
Q Consensus       147 ~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~  226 (514)
                      .+++++|++.++ .++++|+|+|||+||||.|+|+||.|+..++.++|.+||.++++|||+|.+++++++.+.++..|.+
T Consensus        98 ~~lae~L~~~~p-~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~  176 (466)
T PRK07036         98 AELAAKLAELAP-GDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDY  176 (466)
T ss_pred             HHHHHHHHHhCC-CCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccC
Confidence            999999999874 4578999999999999999999999987777778899999999999999999999998877777776


Q ss_pred             CCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCC
Q 010250          227 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDI  306 (514)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gi  306 (514)
                      ..+.+.+++.|+.++++. +...+.+...+.+++++.+....++++|+||+||+|+++|+++|+++||++|+++|++||+
T Consensus       177 ~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~  255 (466)
T PRK07036        177 ASDLVHHLSSPNPYRRPA-GMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDI  255 (466)
T ss_pred             CCCCcEEecCCccccccc-CCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCC
Confidence            556666777777666432 2334455566677888888766678999999999999999999999999999999999999


Q ss_pred             EEEEechhcCcccccccceec-ccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHH
Q 010250          307 LFIADEVICAFGRLGTMFGCD-KYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC  385 (514)
Q Consensus       307 llI~DEv~tG~gr~G~~~~~~-~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~  385 (514)
                      +||+|||||||||+|++|+++ ++|+.|||+|+||+|+||++|+|++++++++++.+.........+.|++||++||++|
T Consensus       256 llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~  335 (466)
T PRK07036        256 LYISDEVVTGFGRLGHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVAC  335 (466)
T ss_pred             EEEEeechhCCCcCchhhhhhhhcCCCCCEEEEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHH
Confidence            999999999999999999988 7999999999999999998899999999999998864211111357889999999999


Q ss_pred             HHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250          386 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH  465 (514)
Q Consensus       386 aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  465 (514)
                      ++++++|++++++++.+++++++++|+++|+++.+++.+.+++|.|+|++++|.++.....++..+......+...|+++
T Consensus       336 aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (466)
T PRK07036        336 AAALKNIEIMEREGLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQER  415 (466)
T ss_pred             HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHC
Confidence            99999999999899999999999999999998877899999999999999999765433333333333566788899999


Q ss_pred             CcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250          466 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEER  506 (514)
Q Consensus       466 Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~  506 (514)
                      |+++.+.++.+||+||+++|++|||+++++|+++++++.+.
T Consensus       416 Gvl~~~~~~~~~l~Ppl~it~~~id~~~~~l~~al~~~~~~  456 (466)
T PRK07036        416 GLLVRPLEHLCVLSPPLIITRAQIDEIVAILRAAIEETADE  456 (466)
T ss_pred             CcEEeecCCEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999877889999999999999999999999999887553

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=3.7e-78  Score=630.22  Aligned_cols=435  Identities=25%  Similarity=0.508  Sum_probs=369.3

Q ss_pred             ccccCCccccccCCCC-CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCc
Q 010250           66 HDMLAPFTAGWQSTDV-HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK  144 (514)
Q Consensus        66 ~~~~~p~~~~~~~~~~-~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~  144 (514)
                      +..|+|+......... .|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+.+ ..+++
T Consensus        29 ~~~~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~~~~~~-~~~~~  107 (472)
T PRK08742         29 AVLWHPCTQMREHPHTLPLVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIAAQAGELEQVMLA-GFTHE  107 (472)
T ss_pred             cccccCCcccccccccCCCeeEEecccCEEEeCCCCEEEEcCccHHhccCCCCCHHHHHHHHHHHHhCCCcccc-ccCCH
Confidence            3367777654322112 247899999999999999999999999999999999999999999999987654332 34678


Q ss_pred             hHHHHHHHHHHhcCc----CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccc
Q 010250          145 PSLDLAKELLEMFTA----SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL  220 (514)
Q Consensus       145 ~~~ela~~L~~~~~~----~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~  220 (514)
                      +..+|+++|++.++.    .++++|+|++||+||||+|||+||.|+..++.++|.+||.++++|||+|.+++++++.+.+
T Consensus       108 ~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~  187 (472)
T PRK08742        108 PAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLY  187 (472)
T ss_pred             HHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCccc
Confidence            889999999998853    1468999999999999999999999987777778899999999999999999999998777


Q ss_pred             cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHH
Q 010250          221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQA  299 (514)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~  299 (514)
                      +..|.+..+.+.+++.|+.++... +...+++...+++.+++++.. .++++++||+|| +||++|+++||++||++|++
T Consensus       188 ~~~~~p~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~l~~~~~~-~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~  265 (472)
T PRK08742        188 RRVYAPLLLESLFAPSPDAYLAEP-GQSAEDYALQAADALQALFEQ-SPGEICALILEPRLQCAGGMRMHHPAYLRRARE  265 (472)
T ss_pred             ccccCCCCCCCEEeCCCCcccccc-CCCHHHHHHHHHHHHHHHHHh-CCCceEEEEEccccccCCCcccCCHHHHHHHHH
Confidence            777776656667778887766543 334444555667888888863 457899999999 69999999999999999999


Q ss_pred             HHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCC
Q 010250          300 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS  379 (514)
Q Consensus       300 l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~  379 (514)
                      +|++||++||+|||||||||+|++|+++++|+.|||+|+||+|+||++|+|++++++++++.+.... ..+.+.|++||+
T Consensus       266 lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~~~-~~~~~~h~~T~~  344 (472)
T PRK08742        266 LCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDS-RERAFLHSHSYT  344 (472)
T ss_pred             HHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEEEcccccCCCCCcceeeccHHHHHHhhccC-ccCccCcCCCCC
Confidence            9999999999999999999999999999999999999999999999779999999999999875321 113557899999


Q ss_pred             CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHH
Q 010250          380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFG  459 (514)
Q Consensus       380 ~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~  459 (514)
                      +||++|++++++|++++++++.+++++++++|++.++.+.+++.+.++||.|++++++|..+..+..++..+......+.
T Consensus       345 gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~  424 (472)
T PRK08742        345 GNPLACAAALATLDIFADDDVIARNQPTAARMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAY  424 (472)
T ss_pred             ccHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHH
Confidence            99999999999999999999999999999999988887767899999999999999999754433333333333456678


Q ss_pred             HHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          460 AQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       460 ~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      +.|+++||++.+.|+.|||.||+++|++||++++++|+++++++.
T Consensus       425 ~~~~~~Gll~~~~g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~~  469 (472)
T PRK08742        425 RAALARGVVLRPLGDVLYWMPPYCVDEAQLALLADTTRHAIDEAV  469 (472)
T ss_pred             HHHHHCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            899999999999889999999999999999999999999997653

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=1.3e-77  Score=626.63  Aligned_cols=432  Identities=27%  Similarity=0.555  Sum_probs=368.9

Q ss_pred             ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250           68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL  147 (514)
Q Consensus        68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~  147 (514)
                      .|+|++.........|+++++++|+|+||.|||+||||.+++|+.+|||+||+|.+|+.+|++++.+.+.. ...++...
T Consensus        15 ~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~-~~~~~~~~   93 (466)
T PRK07030         15 LWHPCTQMKDHEQLPLIPIRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVILA-GFSHEPVI   93 (466)
T ss_pred             cccccccccccccCCCceEEeeeccEEEECCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCcccc-ccCCHHHH
Confidence            45665543211111346899999999999999999999999999999999999999999999987654332 34678889


Q ss_pred             HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250          148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP  227 (514)
Q Consensus       148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~  227 (514)
                      +|+++|++.++ .++++|+|++||+||||.|+|+|+.|+..++.++|.+||.++++|||+|.+++++++.+.++..+.+.
T Consensus        94 ~lae~L~~~~p-~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~  172 (466)
T PRK07030         94 ELSERLVKITP-PGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPL  172 (466)
T ss_pred             HHHHHHHHhCC-CCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCcc
Confidence            99999999874 45789999999999999999999999877777888999999999999999999999987777777765


Q ss_pred             CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHhcCC
Q 010250          228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDI  306 (514)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~~~gi  306 (514)
                      .+.+.++++|+.++... +...+.+..++++++++++.+ .++++|+||+|| +|+++|+++|+++||++|+++|++||+
T Consensus       173 ~~~~~~~p~~~~~~~~~-~~~~~~~~~~~l~~le~~~~~-~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~  250 (466)
T PRK07030        173 LLDTIKVPSPDCYLRPE-GMSWEEHSRRMFAHMEQTLAE-HHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGV  250 (466)
T ss_pred             CCCCEEcCCCCcccccc-CCCHHHHHHHHHHHHHHHHHh-CCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCC
Confidence            56677778887766543 334456666778888888864 457899999999 799999999999999999999999999


Q ss_pred             EEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHH
Q 010250          307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA  386 (514)
Q Consensus       307 llI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~a  386 (514)
                      +||+|||||||||+|++|+++++|+.||++|+||+|+||++|+|++++++++++.+.......+.+.|++||++||++|+
T Consensus       251 llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~a  330 (466)
T PRK07030        251 HLIHDEIAVGFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACA  330 (466)
T ss_pred             EEEEeehhhCcCccccchHHHhcCCCCCEEeeehhccCCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHH
Confidence            99999999999999999999999999999999999999988999999999999988642212234679999999999999


Q ss_pred             HHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250          387 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG  466 (514)
Q Consensus       387 aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G  466 (514)
                      +++++|++++++++.+++++++++|+++|+++.+++.+.+++|.|+++++++..+.....++.........+...|+++|
T Consensus       331 aa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~G  410 (466)
T PRK07030        331 AALATLDIFEQDNVIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERG  410 (466)
T ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCC
Confidence            99999999999999999999999999999998668899999999999999997544333333222223456888999999


Q ss_pred             cEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          467 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       467 v~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      +++.+.++.+||.||+++|++||++++++|+++++++
T Consensus       411 vl~~~~g~~i~~~Ppl~it~~eid~~~~~l~~al~~~  447 (466)
T PRK07030        411 ALLRPLGSVVYFLPPYVITPEQIDFLAEVASEGIDIA  447 (466)
T ss_pred             eEEEecCCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence            9999888899999999999999999999999999887

>PRK07483 hypothetical protein; Provisional

Probab=100.00  E-value=1.7e-77  Score=623.06  Aligned_cols=418  Identities=35%  Similarity=0.667  Sum_probs=360.2

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||+|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+.. ...++...+|+++|++.++ .+
T Consensus        12 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~av~~ql~~~~~~~~~-~~~~~~~~~lae~L~~~~p-~~   89 (443)
T PRK07483         12 TLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIHAQIDRLAYAHTS-FFTTEPAEALADRLVAAAP-AG   89 (443)
T ss_pred             CCceEEeceEEEEEeCCCCEEEEcCccHhhhccCCCCHHHHHHHHHHHHhccCcccc-ccCCHHHHHHHHHHHHhCC-CC
Confidence            689999999999999999999999999999999999999999999999987654332 1357888999999999874 45


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      +++|+|++||+||||.|+|+||.|+..++.++|.+||.++++|||+|.+++++++.+.++..+.+..+.+.+++.|..|+
T Consensus        90 ~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~  169 (443)
T PRK07483         90 LEHVYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYR  169 (443)
T ss_pred             CCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCcccc
Confidence            78999999999999999999999987777788899999999999999999999988766666665555556666666566


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccC-CCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIG-AGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL  320 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~-~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~  320 (514)
                      ........+.+...+++++++++....++++|+||+||+|| ++|+++|+++||++|+++|+|||++||+|||||||||+
T Consensus       170 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRt  249 (443)
T PRK07483        170 EQRAGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRT  249 (443)
T ss_pred             ccccCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccC
Confidence            54333444556666678888877666667899999999998 58999999999999999999999999999999999999


Q ss_pred             cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250          321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI  400 (514)
Q Consensus       321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~  400 (514)
                      |++|+++++|++|||+|+||+|+||++|+|++++++++++.+...   .+.+.|++||++||++|++++++|++++++++
T Consensus       250 G~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~---~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l  326 (443)
T PRK07483        250 GTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADG---SGFFQHGHTYLGHATACAAALAVQRVIAEDGL  326 (443)
T ss_pred             cHHHHHhhcCCCCCeeeehhhhccCccccEEEEEcHHHHHHHhcC---CCccccCCCCCCCHHHHHHHHHHHHHHHhcCH
Confidence            999999999999999999999999977999999999999988642   12456999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------
Q 010250          401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------  472 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------  472 (514)
                      .+++++++++|+++|+++ .+++.+.++||.|+|++++|..+..+..++.........+.+.|+++|+++.+.       
T Consensus       327 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~  406 (443)
T PRK07483        327 LANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGV  406 (443)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCC
Confidence            999999999999999987 678999999999999999997654333332222234567889999999999764       


Q ss_pred             -CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          473 -GDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       473 -g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                       ++.|||.||+++|++|||+++++|++++.++.
T Consensus       407 ~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~  439 (443)
T PRK07483        407 RGDHVLLAPPFIITAAQIDEIVERLGDAIDAAL  439 (443)
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence             36899999999999999999999999998654

>PRK12403 putative aminotransferase; Provisional

Probab=100.00  E-value=4e-77  Score=623.12  Aligned_cols=433  Identities=36%  Similarity=0.667  Sum_probs=364.4

Q ss_pred             ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250           68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL  147 (514)
Q Consensus        68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~  147 (514)
                      .|+|+..........|+++++|+|+|+||.|||+||||.+|+|+++|||+||+|++|+.+|++++.+.+..+..+++...
T Consensus        22 ~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~  101 (460)
T PRK12403         22 HIHAFLDQKALNAEGPRVMVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPYYNMFFHTTHPAVI  101 (460)
T ss_pred             cccccccccccccCCCceEEeceeeEEEeCCCCEEEECchhHHhhcCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHH
Confidence            56776644221223589999999999999999999999999999999999999999999999997765444345778899


Q ss_pred             HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250          148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP  227 (514)
Q Consensus       148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~  227 (514)
                      +|+++|+++++ .++++++|++||+|||++|||+|+.|+..+++++|.+||.+.++|||++++++++++.+.++. +...
T Consensus       102 ~lae~L~~~~p-~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~-~~~~  179 (460)
T PRK12403        102 ELSELLFSLLP-GHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHE-MGGL  179 (460)
T ss_pred             HHHHHHHHhCC-CCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccc-cCCC
Confidence            99999999974 346899999999999999999999997766766678899999999999999999998765443 3333


Q ss_pred             CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCE
Q 010250          228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL  307 (514)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gil  307 (514)
                      .+.+.+++.|..|+.+.. ...+.+...+++++++.+.+..++++++||+||+||++|++.|+++||++|+++|++||++
T Consensus       180 ~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~l  258 (460)
T PRK12403        180 IPDVAHIDEPYWYANGGE-LTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVL  258 (460)
T ss_pred             CCCCEEeCCCcccccccC-CChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence            455667777776664321 2234565556678877776655678999999999999999999999999999999999999


Q ss_pred             EEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHH
Q 010250          308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV  387 (514)
Q Consensus       308 lI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aa  387 (514)
                      ||+|||||||||+|++|+++++|++|||+|+||+|+||++|+|++++++++++.+....   +.+.|++||++||++|++
T Consensus       259 LI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~gK~lggG~~Piga~v~~~~i~~~~~~~~---~~~~~~~T~~gnPl~~Aa  335 (460)
T PRK12403        259 LCADEVIGGFGRTGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQG---GVFAHGLTYSGHPVAAAV  335 (460)
T ss_pred             EEEeccccCCCcCchhhhhhhcCCCCCeEEEcccccccccceEEEEECHHHHHHHhcCC---CccccCCCCCCCHHHHHH
Confidence            99999999999999999999999999999999999999779999999999999886321   345689999999999999


Q ss_pred             HHHHHHHHhhccHHHHHH-HHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250          388 AIEALKIYKERNIVEQVN-KIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH  465 (514)
Q Consensus       388 a~aal~~~~~~~~~~~~~-~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  465 (514)
                      ++++|++++++++.++++ +++++|++.|+++ .+++++.++||.|+|++++|..+.....++.........+...|+++
T Consensus       336 ala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (460)
T PRK12403        336 AIANLKALRDEGVVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEE  415 (460)
T ss_pred             HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhC
Confidence            999999999989999996 9999999999987 67899999999999999999754333332222222344567788999


Q ss_pred             CcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250          466 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEER  506 (514)
Q Consensus       466 Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~  506 (514)
                      |+++.+.++.+||+||+++|++|||+++++|+++++++.++
T Consensus       416 Gll~~~~~~~~~l~Ppl~it~~eid~~~~~l~~al~~~~~~  456 (460)
T PRK12403        416 GVIIRSTLGRMIMAPALVAGRAEIDELVDKTRIAVDRTARE  456 (460)
T ss_pred             CEEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            99998877789999999999999999999999999887644

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=4.3e-77  Score=621.12  Aligned_cols=425  Identities=24%  Similarity=0.483  Sum_probs=363.4

Q ss_pred             ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250           68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL  147 (514)
Q Consensus        68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~  147 (514)
                      .|+|++.........|+++++++|+|+||+|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.... ..+++...
T Consensus        22 ~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~  100 (453)
T PRK06943         22 VWHPCTQMKHHERLPLLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLA-GCTHEPAI  100 (453)
T ss_pred             cccCCcCccccccCCCceEEecccCEEEeCCCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCcccc-ccCCHHHH
Confidence            56666543211112589999999999999999999999999999999999999999999999987654332 34678889


Q ss_pred             HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250          148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP  227 (514)
Q Consensus       148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~  227 (514)
                      +|+++|++.++ ..+++|+|++||+||||.|+|+|+.|+..++.++|.+||.++++|||+|.+++++++...++..|.+.
T Consensus       101 ~lAe~L~~~~p-~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~  179 (453)
T PRK06943        101 ELAERLAALTG-GTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPL  179 (453)
T ss_pred             HHHHHHHHhCC-CCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccC
Confidence            99999999874 34679999999999999999999988776677888999999999999999999999988777777766


Q ss_pred             CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHhcCC
Q 010250          228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDI  306 (514)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~~~gi  306 (514)
                      .+.+..+++|+.++... ....+.+..++++++++++.. .++++|+||+|| +||++|+++||++||++|+++|++||+
T Consensus       180 ~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~l~~~l~~-~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gi  257 (453)
T PRK06943        180 IRHAHVVASPDARGARP-GETAADVAARALADVRRLFAE-RAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGV  257 (453)
T ss_pred             CCCCEEECCCCcccccc-CCCHHHHHHHHHHHHHHHHHh-CCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCC
Confidence            56666677776554432 233455566778888888864 457899999999 599999999999999999999999999


Q ss_pred             EEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHH
Q 010250          307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA  386 (514)
Q Consensus       307 llI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~a  386 (514)
                      +||+|||||||||+|++|+++++|++|||+|+||+|+||++|+|++++++++++.+.... ..+.+.|++||++||++|+
T Consensus       258 llI~DEV~TG~GRtG~~fa~~~~gv~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~-~~~~~~~~~T~~gnpl~~a  336 (453)
T PRK06943        258 HLIADEIAVGCGRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDD-VTRGFLHSHSYTGNPLACR  336 (453)
T ss_pred             EEEeechhhCCCCCcchhHHHhCCCCCCeEeeehhhccCcccceEEEEcHHHHHhhcccC-ccCCccCCCCCCCCHHHHH
Confidence            999999999999999999999999999999999999999889999999999999886321 1123568999999999999


Q ss_pred             HHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250          387 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG  466 (514)
Q Consensus       387 aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G  466 (514)
                      +++++|++++++++.+++++++++|+++|+++.+++.+.+++|.|+|++++|..+..+      .......+...|+++|
T Consensus       337 aa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gvel~~~~~~------~~~~~~~i~~~~~~~G  410 (453)
T PRK06943        337 AALATLDLFAEDDVLARNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFDVALDGDA------ARTFSRRFFEAALERE  410 (453)
T ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccccEEEEEEccCCCc------chHHHHHHHHHHHHCC
Confidence            9999999999999999999999999999999866788889999999999999743211      1123567888999999


Q ss_pred             cEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          467 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       467 v~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      +++.+.++.+||+||+++|++|||+++++|+++++++
T Consensus       411 ll~~~~g~~l~~~Ppl~it~~eid~~~~~l~~al~~~  447 (453)
T PRK06943        411 LLLRPIGTTVYLMPPYVLDDDEIAWLAERTRATLDAT  447 (453)
T ss_pred             cEEEecCCEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence            9999888889999999999999999999999999876

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=3.6e-77  Score=623.48  Aligned_cols=433  Identities=31%  Similarity=0.586  Sum_probs=368.5

Q ss_pred             ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250           68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL  147 (514)
Q Consensus        68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~  147 (514)
                      .|+|+..........|+++++|+|+|+||.|||+||||.+++|+++|||+||+|.+|+.+|++++.+.+.+ +.+++...
T Consensus        24 ~~~~~~~~~~~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~~-~~~~~~~~  102 (460)
T PRK06916         24 VWHPFTQMKDYLEEDPLIIERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTLL-GLANVPSI  102 (460)
T ss_pred             cccccccccccccCCCeeEEeccccEEEeCCCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCcccc-ccCCHHHH
Confidence            45665532111123689999999999999999999999999999999999999999999999987654332 34678889


Q ss_pred             HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250          148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP  227 (514)
Q Consensus       148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~  227 (514)
                      +|+++|++.++ .++++++|+|||+||||.|+|+||.|+..++.++|.+||.++++|||++.+++++++.+.++..|.+.
T Consensus       103 ~lae~L~~~~p-~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~  181 (460)
T PRK06916        103 LLAEKLIEVVP-EGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSL  181 (460)
T ss_pred             HHHHHHHHhCC-CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCC
Confidence            99999999974 45689999999999999999999999877777889999999999999999999999987777777765


Q ss_pred             CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHhcCC
Q 010250          228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDI  306 (514)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~~~gi  306 (514)
                      .+.+.++++|+.++.+... +.+.+...+++++++++.. .++++|+||+|| +||++|+++|+++||++|+++|++||+
T Consensus       182 ~~~~~~~p~p~~~~~~~~~-~~~~~~~~~~~~l~~~l~~-~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~  259 (460)
T PRK06916        182 LFEAIKMPYPYTYRSPYGN-DKAEIVKKHLEELEELLKE-KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNV  259 (460)
T ss_pred             CCCCEEeCCCcccccccCC-ChHHHHHHHHHHHHHHHHh-CCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCC
Confidence            5666677777776654322 3345556677888888863 457899999999 699999999999999999999999999


Q ss_pred             EEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHH
Q 010250          307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA  386 (514)
Q Consensus       307 llI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~a  386 (514)
                      +||+|||||||||+|++|+++++|+.|||+|+||+|+||++|+|++++++++++.+.......+.+.|++||++||++|+
T Consensus       260 llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~a  339 (460)
T PRK06916        260 LFITDEVATGFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCA  339 (460)
T ss_pred             EEEeechhhCCCcCchhhHHHhcCCCCCeeeeehhhhcCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHH
Confidence            99999999999999999999999999999999999999978999999999999987532111234568999999999999


Q ss_pred             HHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250          387 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG  466 (514)
Q Consensus       387 aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G  466 (514)
                      +++++|++++++++.+++++++++|++.|+++.+++.+.+++|.|+|++++|.++.....++.........+...|+++|
T Consensus       340 aa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~G  419 (460)
T PRK06916        340 VALANLELYEKTNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELG  419 (460)
T ss_pred             HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCC
Confidence            99999999999999999999999999999998668889999999999999997654433333222233567889999999


Q ss_pred             cEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          467 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       467 v~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      +++.+.++.+||.||+++|++||++++++|+++++++.
T Consensus       420 vl~~~~g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~  457 (460)
T PRK06916        420 MLTRPLGNTIVFMPPLASTIDELDEMLRILYKAISDVT  457 (460)
T ss_pred             eEEEecCCEEEEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence            99998888999999999999999999999999997653

>PRK07678 aminotransferase; Validated

Probab=100.00  E-value=3.9e-76  Score=614.81  Aligned_cols=414  Identities=34%  Similarity=0.662  Sum_probs=354.1

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||.|||+||||.+++|+++|||+||+|++|+.+|++++.+.+.  ..++++..+|+++|+++++.  
T Consensus        29 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~lae~l~~~~~~--  104 (451)
T PRK07678         29 ATMVVAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPL--TQSHEPAIKLAEKLNEWLGG--  104 (451)
T ss_pred             CCeeEEeeeeeEEEeCCCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcccc--ccCCHHHHHHHHHHHHhCCC--
Confidence            47999999999999999999999999999999999999999999999998765432  23567889999999998743  


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      .++|+|++||+||||.|||+||.|++.++.++|.+||.++++|||++.+++++++.+.++..|.+..+.+.+++.|+.++
T Consensus       105 ~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~  184 (451)
T PRK07678        105 EYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYR  184 (451)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCcccc
Confidence            36999999999999999999999987767778899999999999999999999988776666766667777788887776


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                      .+... ..+......++++++++....++++|+||+||+|+++|+++|+++||++|+++|++||++||+|||||||||+|
T Consensus       185 ~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG  263 (451)
T PRK07678        185 MPGIE-SEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTG  263 (451)
T ss_pred             ccccC-ChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCc
Confidence            54321 11222333456678888655567899999999999999999999999999999999999999999999999999


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~  401 (514)
                      ++|+++++|++|||+|+||+|+||++|+|++++++++++.+.... ..+.+.|++||++||++|++++++|++++++++.
T Consensus       264 ~~~~~~~~gv~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~~~-~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~  342 (451)
T PRK07678        264 KAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKG-EYEHFRHVNTFGGNPAACALALKNLEIMENENLI  342 (451)
T ss_pred             hhHHHHhcCCCCCEEEeecccccCCcceeEEEEcHHHHHHHhccC-cccccccCCCCCcCHHHHHHHHHHHHHHHhCCHH
Confidence            999999999999999999999999889999999999999886421 1124579999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------C
Q 010250          402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------G  473 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g  473 (514)
                      +++++++++|+++|+++ .+++.+.+++|.|+|+++++..+.....+  .+......+...|+++|+++.+.       +
T Consensus       343 ~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~--~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~  420 (451)
T PRK07678        343 ERSAQLGELLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEP--ADNDKVASVVAACKEKGLIIGKNGDTVAGYN  420 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCc--CchHHHHHHHHHHHHCCcEEeecCccccCCC
Confidence            99999999999999875 67899999999999999999754322111  12234567888999999999764       2


Q ss_pred             CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          474 DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       474 ~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      +.|||+||+++|++|||+++++|+++++++
T Consensus       421 ~~lrl~Ppl~it~~eid~~~~~l~~~l~~~  450 (451)
T PRK07678        421 NVLTLSPPLVISSEEIAFIVGTLKTALERI  450 (451)
T ss_pred             CEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence            679999999999999999999999998754

>PRK06062 hypothetical protein; Provisional

Probab=100.00  E-value=4.8e-76  Score=613.54  Aligned_cols=419  Identities=32%  Similarity=0.580  Sum_probs=354.6

Q ss_pred             ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250           68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL  147 (514)
Q Consensus        68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~  147 (514)
                      +++|+....   ...|+++++++|+|+||+|||+||||.+|+|+++|||+||+|++|+.+|++++.+.+.  ...+++..
T Consensus        24 ~~~~~~~~~---~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~--~~~~~~~~   98 (451)
T PRK06062         24 VFHSWSAQG---KINPMVIAGAEGSYVWDYEGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAP--AHANDARS   98 (451)
T ss_pred             ccccccccc---cCCCceEEeceeeEEEECCCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCC--ccCCHHHH
Confidence            456654332   2368999999999999999999999999999999999999999999999998765433  33678889


Q ss_pred             HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250          148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP  227 (514)
Q Consensus       148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~  227 (514)
                      +|+++|+++.+ .++++|+|++||+||||.|+|+||.|      ++|.+||.++++|||++.+++++++.+..+. ..+.
T Consensus        99 ~lae~L~~~~p-~~~~~v~f~~SGsEAve~AlklAr~~------tgr~~ii~~~~~yHG~t~~als~~~~~~~~~-~~~~  170 (451)
T PRK06062         99 EAARLIAERAP-GDLSKVFFTNGGADANEHAVRMARLH------TGRPKVLSAYRSYHGGTGSAINLTGDPRRWP-NDTG  170 (451)
T ss_pred             HHHHHHHHhCC-CCCCEEEEcCChHHHHHHHHHHHHHh------hCCceEEEEeCCCCCCCHHHHhhcCCccccc-CCCC
Confidence            99999999874 45789999999999999999999988      5688999999999999999999988664332 2322


Q ss_pred             CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCE
Q 010250          228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL  307 (514)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gil  307 (514)
                      .+.+.+++.|..++.++...+.+++...+++++++++....++++++||+||+|+++|+++|+++||++|+++|++||++
T Consensus       171 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~l  250 (451)
T PRK06062        171 RAGVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIV  250 (451)
T ss_pred             CCCCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCE
Confidence            34455666666666544322334455566788999886555578999999999999999999999999999999999999


Q ss_pred             EEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHH
Q 010250          308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV  387 (514)
Q Consensus       308 lI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aa  387 (514)
                      ||+|||||||||+|++|+++++|+.||++||||+|+||++|+|++++++++++.+..     ..+.|++||++||++|++
T Consensus       251 LI~DEV~tGfGRtG~~~a~~~~gv~PDi~t~gK~lggG~~Pigav~~~~~i~~~~~~-----~~~~~~~T~~gnpl~~Aa  325 (451)
T PRK06062        251 LIADEVMAGFGRTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFAD-----RPYPGGLTYSGHPLACAA  325 (451)
T ss_pred             EEeeccccCCCcCcHHHHHHhcCCCCCeeeechhhhcCCcCcEEEEEcHHHHHHhcc-----CCCCCCCCCCCCHHHHHH
Confidence            999999999999999999999999999999999999998899999999999998853     245688999999999999


Q ss_pred             HHHHHHHHhhccHHHHHHHHH-HHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCC---ccchHHHHHHHH
Q 010250          388 AIEALKIYKERNIVEQVNKIA-PKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPP---EWGIGAYFGAQC  462 (514)
Q Consensus       388 a~aal~~~~~~~~~~~~~~~~-~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~l  462 (514)
                      ++++|++++++++.+++++++ ++|++.|+++ .+++.+.+++|.|+|++++|..+.....++..   .......+...|
T Consensus       326 a~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l  405 (451)
T PRK06062        326 AVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAAC  405 (451)
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHH
Confidence            999999999989999999999 6999999998 56788999999999999999754322222111   122456788999


Q ss_pred             HHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          463 EKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       463 ~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      +++|+++.+.++.+||+||+++|++|||+++++|+++++++.
T Consensus       406 ~~~Gvl~~~~~~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~  447 (451)
T PRK06062        406 KERGLLPFVNGNRIHVVPPCTVTEDEVREGLAILDAALAVAD  447 (451)
T ss_pred             HHCCcEEeecCCEEEEECCccCCHHHHHHHHHHHHHHHHHhh
Confidence            999999988788999999999999999999999999997764

>PRK06541 hypothetical protein; Provisional

Probab=100.00  E-value=5.2e-75  Score=606.63  Aligned_cols=433  Identities=35%  Similarity=0.674  Sum_probs=368.4

Q ss_pred             ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250           68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL  147 (514)
Q Consensus        68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~  147 (514)
                      +|+||+.........|+++++|+|+|+||.|||+||||.+++|+++|||+||+|++|+.+|++++.+... +...++...
T Consensus        20 ~~~~~~~~~~~~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Av~~q~~~~~~~~~-~~~~~~~~~   98 (460)
T PRK06541         20 LWMHFTRHGAYIDAPVPVIVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEAAAKQAGTLAFFPL-WSYAHPPAI   98 (460)
T ss_pred             cccCccCccccccCCCceEEeCcccEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhCcCccc-cccCCHHHH
Confidence            7888887644322247889999999999999999999999999999999999999999999998765433 234678889


Q ss_pred             HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250          148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP  227 (514)
Q Consensus       148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~  227 (514)
                      +++++|++.++ .++++|+|++||+||+|.|+|+||.|++.++.++|.+||.++++|||++.+++++++.+.++..|.+.
T Consensus        99 ~la~~l~~~~p-~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~  177 (460)
T PRK06541         99 ELAERLAALAP-GDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPL  177 (460)
T ss_pred             HHHHHHHHhCC-CCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCC
Confidence            99999999874 35789999999999999999999999876677778999999999999999999999887777777766


Q ss_pred             CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCE
Q 010250          228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL  307 (514)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gil  307 (514)
                      .+.+.+++.|+.++++..+.+.+.+...+++.+++++...+++++++||+||+++++|+++||++||++|+++|++||++
T Consensus       178 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~l  257 (460)
T PRK06541        178 VPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVL  257 (460)
T ss_pred             CCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence            67777888887776541122334455566788898887655678999999999999999999999999999999999999


Q ss_pred             EEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHH
Q 010250          308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV  387 (514)
Q Consensus       308 lI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aa  387 (514)
                      ||+|||||||||+|++|+++++|++||++|+||+|+||++|+|++++++++++.+....   +.+.|++||++||++|++
T Consensus       258 lI~DEV~tGfGR~G~~~a~~~~gv~PDivt~gK~l~~G~~pigav~~~~~i~~~~~~~~---~~~~~~~T~~gnp~~~aa  334 (460)
T PRK06541        258 LVSDEVICAFGRLGEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGP---TMFLHGYTFGGHPVSAAV  334 (460)
T ss_pred             EEEechhhCCCcCchhhhhhhcCCCCCEEEecccccCCccceeEEEEcHHHHHHhhcCC---CccccCCCCCCCHHHHHH
Confidence            99999999999999999999999999999999999999669999999999999886421   355688999999999999


Q ss_pred             HHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCc---cchHHHHHHHHHH
Q 010250          388 AIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPE---WGIGAYFGAQCEK  464 (514)
Q Consensus       388 a~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~---~~~~~~~~~~l~~  464 (514)
                      ++++|++++++++.+++++++++|+++|+++.+++++.+++|.|+|++++|.++.....++...   ......+...|++
T Consensus       335 ala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  414 (460)
T PRK06541        335 ALANLDIFEREGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFE  414 (460)
T ss_pred             HHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHh
Confidence            9999999998899999999999999999998558889999999999999997543333333221   1122357789999


Q ss_pred             CCcEEEee--C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          465 HGMLVRVS--G-DNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       465 ~Gv~~~~~--g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      +|+++.+.  + +.|||+||+++|++|||+++++|++++.++..
T Consensus       415 ~Gi~~~~~~~g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~~  458 (460)
T PRK06541        415 AGLYCRADDRGDPVVQLAPPLISGQEEFDEIEQILRSVLTEAWA  458 (460)
T ss_pred             CCeEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999863  3 57999999999999999999999999976543

>PRK06917 hypothetical protein; Provisional

Probab=100.00  E-value=1.2e-74  Score=602.35  Aligned_cols=417  Identities=34%  Similarity=0.572  Sum_probs=355.6

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      +| ++++++|+|+||+|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+.. ...+++..+|+++|++.++ ..
T Consensus        14 ~p-~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~lae~L~~~~p-~~   90 (447)
T PRK06917         14 YP-VISHGKGVYLYDQNGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYRS-QFTSEPAEKLAKKLSDLSP-GD   90 (447)
T ss_pred             CC-eEEeeeeeEEEeCCCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCcccc-ccCCHHHHHHHHHHHHhCC-CC
Confidence            56 589999999999999999999999999999999999999999999986543221 2357888999999999874 34


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      +++++|++||+||+|.|||+|+.|+..++.++|.+||.++++|||++.+++++++.+.++..|.+..+.+..++.|..++
T Consensus        91 ~~~v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~  170 (447)
T PRK06917         91 LNWSFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYR  170 (447)
T ss_pred             CCEEEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccc
Confidence            67999999999999999999999987778788999999999999999999998887766666654444445555565555


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCC-CCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGA-GGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL  320 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~-~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~  320 (514)
                      .+.+ .+.+.+..++.+.+++++.+..++++|+||+||++++ +|+++|+++||++|+++|++||++||+|||+|||||+
T Consensus       171 ~~~~-~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRt  249 (447)
T PRK06917        171 CPVQ-KVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRT  249 (447)
T ss_pred             cccC-CChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcc
Confidence            4332 2234455667788888887665568999999999985 6799999999999999999999999999999999999


Q ss_pred             cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250          321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI  400 (514)
Q Consensus       321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~  400 (514)
                      |++|+++++++.||++|+||+|+||++|+|++++++++++.+....   +.+.|++||++||++|++++++|++++++++
T Consensus       250 G~~~a~~~~gv~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~---~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l  326 (447)
T PRK06917        250 GAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGS---RSIMSGHTLSANPLSAATALAVLEYMEKHNL  326 (447)
T ss_pred             cchhhHHhcCCCCCEEEeeehhccCCcceEEEEEcHHHHHHHhccC---cccccccCCCCCHHHHHHHHHHHHHHHHCCH
Confidence            9999999999999999999999999779999999999999886421   2456889999999999999999999998899


Q ss_pred             HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------
Q 010250          401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------  472 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------  472 (514)
                      .+++++++++|++.|+++ .+++.+.+++|.|+|++++|..+.....++.........+...|+++|+++.+.       
T Consensus       327 ~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~  406 (447)
T PRK06917        327 PEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGK  406 (447)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCC
Confidence            999999999999999998 568999999999999999997543333333222235677889999999999865       


Q ss_pred             -CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          473 -GDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       473 -g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                       ++.+||+||+++|++|||+++++|+++++++.+
T Consensus       407 ~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~  440 (447)
T PRK06917        407 EGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ  440 (447)
T ss_pred             CCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence             468999999999999999999999999987743

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=100.00  E-value=6.5e-74  Score=596.55  Aligned_cols=426  Identities=35%  Similarity=0.628  Sum_probs=358.0

Q ss_pred             ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250           68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL  147 (514)
Q Consensus        68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~  147 (514)
                      +|+|+.... ...+.|+++++++|+|+||.|||+||||.+++|+++|||+||+|.+|+.+|++++.+.+.+ ...++...
T Consensus        18 ~~~~~~~~~-~~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~-~~~~~~~~   95 (445)
T PRK09221         18 HWMPFTANR-QFKAAPRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPAF-QMGHPLAF   95 (445)
T ss_pred             cccCccccc-ccCCCCceEEeccccEEEeCCCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCcccc-ccCCHHHH
Confidence            356654321 1123689999999999999999999999999999999999999999999999987655432 34678889


Q ss_pred             HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250          148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP  227 (514)
Q Consensus       148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~  227 (514)
                      +|+++|++.++ .++++|+|++||+||||.|+|+||.|+..+++++|.+||.++++|||+|.+++++++.+.++..|...
T Consensus        96 ~la~~L~~~~p-~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~  174 (445)
T PRK09221         96 ELAERLAELAP-GGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGL  174 (445)
T ss_pred             HHHHHHHHhCC-CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCC
Confidence            99999999874 35789999999999999999999999877666678899999999999999999999887777666655


Q ss_pred             CCcccccCCCC-cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCC
Q 010250          228 APFVLHTDCPH-YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDI  306 (514)
Q Consensus       228 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gi  306 (514)
                      .+.+.++++|. .+++.... ..+.+...+.+++++++...+++++++||+||+++++|++.|+++||++|+++|++||+
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~  253 (445)
T PRK09221        175 LPGVDHLPHTLDLPENAFSK-GQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGI  253 (445)
T ss_pred             CCCCeEeCCCccccccccCC-ChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCC
Confidence            55555666654 33332221 12334445567888888765557899999999999999999999999999999999999


Q ss_pred             EEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHH
Q 010250          307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA  386 (514)
Q Consensus       307 llI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~a  386 (514)
                      +||+|||||||||+|++|+++++++.||++|+||+|+||++|+|++++++++++.+.........+.|++||++||++|+
T Consensus       254 llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~a  333 (445)
T PRK09221        254 LLIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACA  333 (445)
T ss_pred             EEEEeehhhCCCcCchhhHHHhcCCCCCEEEeccccccCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHH
Confidence            99999999999999999999999999999999999999988999999999999988642111123468899999999999


Q ss_pred             HHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250          387 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG  466 (514)
Q Consensus       387 aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G  466 (514)
                      +++++|++++++++.+++++++++|++.|+++.+++.+.++||.|++.++++.......     . .....+.+.|+++|
T Consensus       334 aa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~-----~-~~~~~~~~~~~~~G  407 (445)
T PRK09221        334 AGLATLDIYREEDLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAP-----G-ARGYEAFMKCFEKG  407 (445)
T ss_pred             HHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEecccccc-----c-chHHHHHHHHHHCC
Confidence            99999999998899999999999999999998667888999999999999997532110     0 12345778999999


Q ss_pred             cEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          467 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       467 v~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      +++.+.++.|||+||+++|++|||+++++|++++.++
T Consensus       408 v~~~~~~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~  444 (445)
T PRK09221        408 LLVRYTGDTIALSPPLIIEKAQIDELVDALGDALRAV  444 (445)
T ss_pred             eEEeecCCEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence            9998888899999999999999999999999999764

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=100.00  E-value=7.9e-74  Score=595.41  Aligned_cols=413  Identities=33%  Similarity=0.602  Sum_probs=352.1

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||.|||+||||.+|+|+++|||+||+|++|+.+|++++.+.+.+ +.+++...+++++|++.++ .+
T Consensus        28 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~~-~~~~~~~~~la~~l~~~~p-~~  105 (442)
T PRK13360         28 APRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAPAF-QMGHPKAFELANRIAEIAP-GG  105 (442)
T ss_pred             CCceEEeeeeeEEEeCCCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcccC-CcCCHHHHHHHHHHHHhCC-CC
Confidence            689999999999999999999999999999999999999999999999987655432 4467888999999999874 45


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YW  240 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~  240 (514)
                      +++|+|++||+||||.|+|+||.|+..+++++|.+||++.++|||+|.+++++++.+..+..|....+.+.+++.+. .+
T Consensus       106 ~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~  185 (442)
T PRK13360        106 LNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLA  185 (442)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhh
Confidence            78999999999999999999999976666667889999999999999999999998877776665555555666553 23


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL  320 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~  320 (514)
                      +..... ..+.+...+.++||+++....++++++||+||+++++|+++|+++||++|+++|++||++||+|||||||||+
T Consensus       186 ~~~~~~-~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~Grt  264 (442)
T PRK13360        186 RNAFSK-GQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRL  264 (442)
T ss_pred             ccccCC-ChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC
Confidence            322221 1233445567889998876556789999999999999999999999999999999999999999999999999


Q ss_pred             cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250          321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI  400 (514)
Q Consensus       321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~  400 (514)
                      |++|+++++|+.||++|+||+|+||++|+|++++++++++.+.........+.|++||++||++|++++++|++++++++
T Consensus       265 G~~~a~~~~gv~PDivt~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l  344 (442)
T PRK13360        265 GAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGL  344 (442)
T ss_pred             ccchhhhhcCCCCceeeeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCCH
Confidence            99999999999999999999999998899999999999998864211111345889999999999999999999998899


Q ss_pred             HHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeC
Q 010250          401 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSP  480 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p  480 (514)
                      .++++++++++++.|+++.+++.+.+++|.|++.++++........      .....+...|+++||++.+.++.+||+|
T Consensus       345 ~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~------~~~~~~~~~l~~~Gvl~~~~~~~lr~~P  418 (442)
T PRK13360        345 LTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPG------KRAYEVFLKCFEKGLMIRYTGDILALSP  418 (442)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcc------hhHHHHHHHHHHCCcEEEecCCEEEEeC
Confidence            9999999999999999885578889999999999999964321110      1245577889999999998888999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHH
Q 010250          481 PFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       481 ~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      |+++|++|||+++++|+++++++
T Consensus       419 pl~~t~~eid~~~~~l~~~l~~~  441 (442)
T PRK13360        419 PLIIEEAQIDELFDILAQALKET  441 (442)
T ss_pred             CCccCHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999998654

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=100.00  E-value=1.5e-73  Score=595.71  Aligned_cols=405  Identities=26%  Similarity=0.462  Sum_probs=341.4

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||+|||+||||.+|+|+++|||+||+|++|+++|+++....+.. ..+++...+|+++|++.++. +
T Consensus        45 ~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~la~~L~~~~p~-~  122 (464)
T PRK06938         45 IPLALKRARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELPLHTL-DLTTPVKDQFVQDLFASLPE-A  122 (464)
T ss_pred             CCceEEeccccEEEeCCCCEEEEccCCccccccCCCCHHHHHHHHHHHHhhhccccc-ccCCHHHHHHHHHHHHhCcc-c
Confidence            689999999999999999999999999999999999999999999999764322222 34678889999999998743 2


Q ss_pred             C---CeEEEe-CChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC
Q 010250          162 M---AKVFFT-NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP  237 (514)
Q Consensus       162 ~---~~v~~~-~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  237 (514)
                      +   ++++|+ |||+|||+.|||+||.|      ++|.+||.++++|||++.+++++++.+.++..+....+.+.++++|
T Consensus       123 ~~~~~~v~f~~~SGSEAve~AlklAr~~------tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p  196 (464)
T PRK06938        123 FAREAKIQFCGPTGTDAVEAALKLVKTA------TGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYP  196 (464)
T ss_pred             ccccceEEEeCCCcHHHHHHHHHHHHHh------hCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCC
Confidence            2   378776 79999999999999987      5788999999999999999999998776666666544556677777


Q ss_pred             CcccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc
Q 010250          238 HYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC  315 (514)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t  315 (514)
                      +.+|+++.. ..+.....+++.+++++.+.  +++++|+||+||+|+++|+++||++||++|+++|++||++||+|||||
T Consensus       197 ~~~~~~~~~-~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~t  275 (464)
T PRK06938        197 YDYRCPFGL-GGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQS  275 (464)
T ss_pred             ccccccccC-chhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc
Confidence            766655432 22334445678888888643  235799999999999999999999999999999999999999999999


Q ss_pred             CcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250          316 AFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY  395 (514)
Q Consensus       316 G~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~  395 (514)
                      ||||+|++|+++++|++|||+|+||+|+|| +|+|++++++++ +.+.       ...|++||++||++|++++++|+++
T Consensus       276 GfGRtG~~~a~e~~gv~PDiv~~gKglggG-~PlsAv~~~~~~-~~~~-------~~~~~~T~~gnpla~Aaa~a~L~~l  346 (464)
T PRK06938        276 GFGRTGKMFAFEHAGIIPDVVVLSKAIGGS-LPLAVVVYREWL-DTWQ-------PGAHAGTFRGNQMAMAAGSATLRYI  346 (464)
T ss_pred             CCCcCcHHHHHHhcCCCCCEEEeeccccCC-CceEEEeehhHh-hccC-------CCCCCCCCCcCHHHHHHHHHHHHHH
Confidence            999999999999999999999999999998 899999999885 5553       2358899999999999999999999


Q ss_pred             hhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCC---CCCccchHHHHHHHHHHCCcEEEe
Q 010250          396 KERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEP---FPPEWGIGAYFGAQCEKHGMLVRV  471 (514)
Q Consensus       396 ~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~Gv~~~~  471 (514)
                      +++++.+++++++++|+++|+++ .+++++.++||.|+|++++|.........   .+........+...|+++|+++.+
T Consensus       347 ~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~  426 (464)
T PRK06938        347 KEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILEL  426 (464)
T ss_pred             HHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEee
Confidence            99999999999999999999998 56899999999999999999754322111   111123456788899999999986


Q ss_pred             e---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          472 S---GDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       472 ~---g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      .   ++.|||.||+++|++|||+++++|++++.++.
T Consensus       427 ~g~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~  462 (464)
T PRK06938        427 GGRHGSVVRFLPPLIITAEQIDEVAEIFAEAVAAAV  462 (464)
T ss_pred             cCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHHHh
Confidence            4   47899999999999999999999999997643

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=100.00  E-value=1.4e-73  Score=594.46  Aligned_cols=388  Identities=30%  Similarity=0.518  Sum_probs=339.0

Q ss_pred             CCCeEEEeeeC-cEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc
Q 010250           81 VHPLVIEKSEG-SYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA  159 (514)
Q Consensus        81 ~~p~~~~~~~G-~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~  159 (514)
                      .+|+++.+++| +|+||.|||+||||.+|+|+.+|||+||+|++|+.+|++++.+.+.  ..+++...+|+++|++.++ 
T Consensus        62 ~~~~~~~~~~G~~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~l~~~~~--~~~~~~~~~lae~L~~~~p-  138 (459)
T PRK11522         62 DYGAVEWQAGGLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQ--ELLDPLRAMLAKTLAALTP-  138 (459)
T ss_pred             CCCeeEEeccCeEEEEECCCCEEEECCcCHHhhhcCCCCHHHHHHHHHHHhhCccccc--ccCCHHHHHHHHHHHHhCC-
Confidence            46889999999 9999999999999999999999999999999999999998765433  2357888999999999874 


Q ss_pred             CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250          160 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY  239 (514)
Q Consensus       160 ~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  239 (514)
                      .+.++++|+|||+||||.|+|+||.|+..   .+|.+||.++++|||+|.+++++++.+.++..|.+..|.+.++++++ 
T Consensus       139 ~~~~~v~f~~SGsEAve~AlklAr~~t~~---~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d-  214 (459)
T PRK11522        139 GKLKYSFFCNSGTESVEAALKLAKAYQSP---RGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGN-  214 (459)
T ss_pred             CCCCEEEEeCCchHHHHHHHHHHHHHhcc---CCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCC-
Confidence            45689999999999999999999988532   34779999999999999999999988777766665545444444432 


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHH--hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF  317 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~--~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~  317 (514)
                                       .+++++++.+  ..++++++||+||+||++|+++||++||++++++|++||++||+|||||||
T Consensus       215 -----------------~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~  277 (459)
T PRK11522        215 -----------------IEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGM  277 (459)
T ss_pred             -----------------HHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecC
Confidence                             3566666643  234679999999999999999999999999999999999999999999999


Q ss_pred             ccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh
Q 010250          318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE  397 (514)
Q Consensus       318 gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~  397 (514)
                      ||+|++|+++++|+.||++|+||+|+||++|+|++++++++++.+..     +++.|++||++||++|++++++|+++++
T Consensus       278 GRtG~~~a~e~~gv~PDivt~gK~lggG~~Pigav~~~~~i~~~~~~-----~~~~~~~T~~gnp~~~Aaala~L~~i~~  352 (459)
T PRK11522        278 GRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFD-----NPFLHTTTFGGNPLACAAALATINVLLE  352 (459)
T ss_pred             CccchhhhhhccCCCCCEEEechhhhCCCccceeEEEcHHHHHHhcc-----CCcccCCCCCCCHHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999998899999999999987753     2457899999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---
Q 010250          398 RNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---  472 (514)
Q Consensus       398 ~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---  472 (514)
                      +++.+++++++++|+++|+++ .++| .+.+++|.|+|++++|.+..           ....+...|+++||++.+.   
T Consensus       353 ~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~~-----------~~~~i~~~l~~~Gvl~~~~~~~  421 (459)
T PRK11522        353 QNLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNE-----------IGYNFASEMFRQRVLVAGTLNN  421 (459)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCch-----------HHHHHHHHHHHCCeEEEecCCC
Confidence            899999999999999999998 4677 78999999999999997532           2456889999999999764   


Q ss_pred             CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 010250          473 GDNIMMSPPFIMSPEEVDELISKYGKALKATEERVK  508 (514)
Q Consensus       473 g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~~  508 (514)
                      ++.+||.||+++|++|||+++++|+++++++.+.++
T Consensus       422 ~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~~~~~~~  457 (459)
T PRK11522        422 AKTIRIEPPLTLTIEQCEQVLKAARKALAAMRVSVE  457 (459)
T ss_pred             CCEEEEECCccCCHHHHHHHHHHHHHHHHHHHHhhc
Confidence            467999999999999999999999999988776554

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=5.4e-73  Score=586.43  Aligned_cols=410  Identities=29%  Similarity=0.513  Sum_probs=349.5

Q ss_pred             ccCCccccccCCCCCC-eEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchH
Q 010250           68 MLAPFTAGWQSTDVHP-LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS  146 (514)
Q Consensus        68 ~~~p~~~~~~~~~~~p-~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~  146 (514)
                      .|+|+....   ...| +++++++|+|+||.|||+||||.+++|+++|||+||+|.+|+.+|++++.+.+. ...++++.
T Consensus        14 ~~~~~~~~~---~~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~   89 (429)
T PRK06173         14 IWHPYSSVT---DPIPVYPVERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMF-GGFTHEPA   89 (429)
T ss_pred             ccccccccc---ccCCCceEEeceeeEEEcCCCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccc-cccCCHHH
Confidence            455654331   1234 468999999999999999999999999999999999999999999998765432 23467888


Q ss_pred             HHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccccCCCC
Q 010250          147 LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFD  225 (514)
Q Consensus       147 ~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~  225 (514)
                      .+|+++|++.++ .++++|+|++||+||||+|+|+||.|+..+++++|.+||++.++|||+|.+++++++. +.++..|.
T Consensus        90 ~~lae~L~~~~p-~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~  168 (429)
T PRK06173         90 VELAQKLLEILP-PSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFN  168 (429)
T ss_pred             HHHHHHHHhhCC-CCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhccc
Confidence            999999999874 4678999999999999999999999987777788999999999999999999998774 34555555


Q ss_pred             CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhc
Q 010250          226 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKY  304 (514)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~  304 (514)
                      +..+.+.++++|+.+.       .+.+...+++.|++++.. .++++|+||+||+ ||++|+++||++||++|+++|++|
T Consensus       169 ~~~~~~~~~~~p~~~~-------~~~~~~~~l~~l~~~i~~-~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~  240 (429)
T PRK06173        169 HSLPVQYFLPQPSIKF-------GEEWNDEAIEPLQDLLEQ-KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQY  240 (429)
T ss_pred             ccCCCCeEeCCCCccc-------chhHHHHHHHHHHHHHHh-CCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHc
Confidence            4444555566554321       133455567788888864 3468999999997 999999999999999999999999


Q ss_pred             CCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHH
Q 010250          305 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS  384 (514)
Q Consensus       305 gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~  384 (514)
                      |++||+|||||||||+|++|+++++|+.|||+||||+|+||++|+|++++++++++.+...  ..+.+.|++||++||++
T Consensus       241 g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~~--~~~~~~~~~T~~g~p~~  318 (429)
T PRK06173        241 GVLLIFDEIATGFGRTGKLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQTICSG--EAKCFMHGPTFMANPLA  318 (429)
T ss_pred             CCeEEecchhcCCCcCCcchHHHhcCCCCCEEEeehhhhCCccccceEEecHHHHHHHhcC--CCCccccCCCCCcCHHH
Confidence            9999999999999999999999999999999999999999988999999999999988631  11346789999999999


Q ss_pred             HHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH
Q 010250          385 CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK  464 (514)
Q Consensus       385 ~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~  464 (514)
                      |++++++|++++++++.+++++++++|++.|+++.+++.+.++||.|+|+++++.+..           ....+.+.|++
T Consensus       319 ~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~~-----------~~~~i~~~l~e  387 (429)
T PRK06173        319 CAIAAESIRLLLESPWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEPV-----------NMATLQPRFVE  387 (429)
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCcc-----------cHHHHHHHHHH
Confidence            9999999999998899999999999999999987567888899999999999996432           13467889999


Q ss_pred             CCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          465 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       465 ~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      +|+++.+.++.|||.||+++|++||++++++|++++.++
T Consensus       388 ~Gi~v~~~g~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~  426 (429)
T PRK06173        388 HGIWVRPFGKLVYIMPPFIISPDELSQLTSGLLRVLKQE  426 (429)
T ss_pred             CCeEEEecCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence            999999988899999999999999999999999999764

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=100.00  E-value=1.2e-72  Score=583.08  Aligned_cols=409  Identities=27%  Similarity=0.479  Sum_probs=346.9

Q ss_pred             ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250           68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL  147 (514)
Q Consensus        68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~  147 (514)
                      .|+|+.+...  ...|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.+|++++.+... ...+++...
T Consensus        13 ~~~~~~~~~~--~~~~~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~-~~~~~~~~~   89 (428)
T PRK07986         13 IWHPYTSMTS--PLPVYPVVSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMF-GGITHPPAI   89 (428)
T ss_pred             cccCCccccc--CCCCeeEEeeeeeEEEeCCCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHhhcCCccc-cccCCHHHH
Confidence            5677654321  1234789999999999999999999999999999999999999999999998764432 123678889


Q ss_pred             HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccccCCCCC
Q 010250          148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDL  226 (514)
Q Consensus       148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~  226 (514)
                      +|+++|++.++ .++++|+|++||+||||.|+|+||.|++.++ ++|.+||.++++|||.|.+++++++. +.++..|..
T Consensus        90 ~la~~L~~~~p-~~~~~v~f~~SGsEAve~AlklAr~~~~~~g-~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~  167 (428)
T PRK07986         90 ELCRKLVAMTP-QPLECVFLADSGSVAVEVAMKMALQYWQAKG-EPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKG  167 (428)
T ss_pred             HHHHHHHhhCC-CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcC-CCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCC
Confidence            99999999874 4578999999999999999999999876554 56789999999999999999998764 334444544


Q ss_pred             CCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhcC
Q 010250          227 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYD  305 (514)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~g  305 (514)
                      ..+.+.+++.|....       .+++.+++++++++++.. .++++++||+||+ ++.+|+++|+++||++|+++|++||
T Consensus       168 ~~~~~~~~~~p~~~~-------~~~~~~~d~~~l~~~l~~-~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g  239 (428)
T PRK07986        168 YLPENLFAPAPQSRF-------DGEWDERDIAPFARLMAA-HRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREG  239 (428)
T ss_pred             CCCCCEEECCCCccc-------chhhHHHHHHHHHHHHHh-CCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcC
Confidence            334444455543211       134567788899888864 3468999999996 9999999999999999999999999


Q ss_pred             CEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHH
Q 010250          306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC  385 (514)
Q Consensus       306 illI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~  385 (514)
                      ++||+|||||||||+|++|+++++|++||++|+||+|+||++|+|++++++++++.+....  .+.+.|++||++||++|
T Consensus       240 ~lLI~DEv~tG~GrtG~~fa~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~--~~~~~~~~T~~g~p~~~  317 (428)
T PRK07986        240 ILLIADEIATGFGRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVAETISNGE--AGCFMHGPTFMGNPLAC  317 (428)
T ss_pred             CEEEEeccccCCccCCCeeeecccCCCCCEEEechhhhCCcccCcchhchHHHHHHhhcCC--CCccccCCCCCcCHHHH
Confidence            9999999999999999999999999999999999999999889999999999999986421  12456899999999999


Q ss_pred             HHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250          386 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH  465 (514)
Q Consensus       386 aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  465 (514)
                      ++++++|++++++++.+++++++++|++.|+++.+++.+.++||.|+++++++.++.           ....+...|+++
T Consensus       318 aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~~-----------~~~~~~~~l~~~  386 (428)
T PRK07986        318 AVANASLSLLESGDWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRPV-----------NMAALQRFFVEQ  386 (428)
T ss_pred             HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCcc-----------cHHHHHHHHHHC
Confidence            999999999999899999999999999999998667889999999999999996432           134578899999


Q ss_pred             CcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          466 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       466 Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      |+++.+.|+.|||.||+++|++||++++++|++++++
T Consensus       387 Gl~~~~~g~~i~~~Ppl~it~~ei~~~~~~l~~~l~~  423 (428)
T PRK07986        387 GVWIRPFGKLIYLMPPYIILPEQLQRLTAAVNRAVQD  423 (428)
T ss_pred             CcEEEecCCEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence            9999988889999999999999999999999999853

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=100.00  E-value=5.8e-73  Score=585.81  Aligned_cols=378  Identities=30%  Similarity=0.507  Sum_probs=329.0

Q ss_pred             CeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCC
Q 010250           83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKM  162 (514)
Q Consensus        83 p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~  162 (514)
                      ++++.+++|+|+||.|||+||||.+|+|+++|||+||+|++|+.+|++++.+.+..  ..++...+++++|++.++ .++
T Consensus        58 ~~~~~~~~g~~l~D~dG~~ylD~~~g~~~~~lGh~hp~v~~Av~~ql~~l~~~~~~--~~~~~~~~lAe~L~~~~p-~~~  134 (442)
T TIGR03372        58 AVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPLHSQE--LLDPLRALLAKTLAALTP-GKL  134 (442)
T ss_pred             eeEEEeCCeeEEEECCCCEEEECCccHHhhhcCCCCHHHHHHHHHHHHhCCCcccc--cCCHHHHHHHHHHHHhCC-CCc
Confidence            35567777799999999999999999999999999999999999999987654332  357888999999999874 346


Q ss_pred             CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccC
Q 010250          163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRY  242 (514)
Q Consensus       163 ~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (514)
                      ++++|+|||+||||.|+|+||.|+..   ++|.+||+++++|||+|.+++++++.+.++..|.+..+.+.++++|+    
T Consensus       135 ~~v~f~~SGsEA~e~AlklAr~~t~~---~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d----  207 (442)
T TIGR03372       135 KYSFFCNSGTESVEAALKLAKAYQSP---RGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGD----  207 (442)
T ss_pred             CEEEEeCCchHHHHHHHHHHHHHHhh---cCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCC----
Confidence            89999999999999999999998643   35789999999999999999999988777776765556666666553    


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHH--hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250          243 AHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL  320 (514)
Q Consensus       243 ~~~~~~~~~~~~~~~~~le~li~~--~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~  320 (514)
                                    .+++++.+.+  ..++++++||+||++|++|+++||++||++|+++|++||+++|+|||||||||+
T Consensus       208 --------------~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRt  273 (442)
T TIGR03372       208 --------------IEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRT  273 (442)
T ss_pred             --------------HHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCcc
Confidence                          2344444432  234689999999999999999999999999999999999999999999999999


Q ss_pred             cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250          321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI  400 (514)
Q Consensus       321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~  400 (514)
                      |++|+++++|+.|||+|+||+|+||++|+|++++++++++.+..     +.+.|++||++||++|++++++|++++++++
T Consensus       274 G~~~a~e~~gv~PDivt~gK~lg~G~~Pigavv~~~~i~~~~~~-----~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l  348 (442)
T TIGR03372       274 GKMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFD-----NPFLHTTTFGGNPLACAAALATINELLEKNL  348 (442)
T ss_pred             ccchhhhhcCCCCCeeeehhhhcCCcccceEEEecHHHHHhhhc-----cCccccCCCCCCHHHHHHHHHHHHHHHhccH
Confidence            99999999999999999999999998899999999999998852     2457899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CCE
Q 010250          401 VEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDN  475 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~  475 (514)
                      .+++++++++|+++|+++ .+++ .+.++||.|+|++++|.++.           ....+...|+++||++.+.   ++.
T Consensus       349 ~~~~~~~G~~l~~~L~~l~~~~~~~i~~vRG~Gl~~giel~~~~-----------~~~~i~~~l~~~Gvl~~~~~~~~~~  417 (442)
T TIGR03372       349 PAQAAIKGDFLLDGFQQLAAEYPDLIIEARGKGLLMAIEFRDNE-----------IGYAFAKELFQQNILVAGTLNNAKS  417 (442)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCceEEEecceEEEEEEeCChH-----------HHHHHHHHHHHCCcEEeecCCCCCE
Confidence            999999999999999998 5677 78999999999999997532           2456889999999999754   368


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      |||.||+++|++|||+++++|++++
T Consensus       418 lr~~Ppl~~t~~~id~~~~~l~~~~  442 (442)
T TIGR03372       418 IRIEPPLTITIEQCALVIKAAKDAL  442 (442)
T ss_pred             EEEECCcccCHHHHHHHHHHHHHhC
Confidence            9999999999999999999999864

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=1.8e-72  Score=581.96  Aligned_cols=407  Identities=27%  Similarity=0.482  Sum_probs=343.2

Q ss_pred             ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250           68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL  147 (514)
Q Consensus        68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~  147 (514)
                      +|+|+..    ....|+++++++|+|+||.|||+||||.+++|+++|||+||+|.+|+.+|++++.+... ...+++...
T Consensus        12 ~~~~~~~----~~~~p~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~-~~~~~~~~~   86 (422)
T PRK05630         12 IWHPYAA----PGVRNRLVTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQIDTMSHVMF-GGLTHEPAI   86 (422)
T ss_pred             cccCccc----CCCCCeeEEeceeeEEEECCCCEEEEcchhHHHhcCCCCCHHHHHHHHHHHHhCCCccc-CCcCCHHHH
Confidence            5566532    12378999999999999999999999999999999999999999999999998764322 123678889


Q ss_pred             HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccccCCCCC
Q 010250          148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDL  226 (514)
Q Consensus       148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~  226 (514)
                      +|+++|++..+ .++++|+|++||+||||.|+|+||.|+..++.++|.+||+++++|||.|.+++++++. +.++..|.+
T Consensus        87 ~lae~L~~~~p-~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~  165 (422)
T PRK05630         87 KLTRKLLNLTD-NGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKG  165 (422)
T ss_pred             HHHHHHHhhCC-CCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccc
Confidence            99999999874 4578999999999999999999999987667778899999999999999999998874 334455554


Q ss_pred             CCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhcC
Q 010250          227 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYD  305 (514)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~g  305 (514)
                      ..+...+++.|.+..     ... .....+.+.+++++.    +++|+||+||+ |+++|+++|+++||++|+++|++||
T Consensus       166 ~~~~~~~~p~~~~~~-----~~~-~~~~~~~~~~~~~~~----~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g  235 (422)
T PRK05630        166 TLPEQIFAPAPPVRG-----SSP-QEISEYLRSLELLID----ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHD  235 (422)
T ss_pred             cCCCCeEcCCCcccC-----CCh-HHHHHHHHHHHHHHh----hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcC
Confidence            444445555553211     111 112334566777664    58999999996 9999999999999999999999999


Q ss_pred             CEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHH
Q 010250          306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC  385 (514)
Q Consensus       306 illI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~  385 (514)
                      ++||+|||||||||+|++|+++++|+.|||+|+||+|+||++|+|++++++++++.+.... ..+.+.|++||++||++|
T Consensus       236 ~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~-~~~~~~h~~T~~g~Pla~  314 (422)
T PRK05630        236 ILLIADEIATGFGRTGELFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPN-GGGALMHGPTFMANPLAC  314 (422)
T ss_pred             CEEEEecceeCCCcCchhhHHHhcCCCCCeeeeechhhcCccccceeeccHHHHHHHhccC-CCCccccCCCCcCCHHHH
Confidence            9999999999999999999999999999999999999999889999999999999886321 113457899999999999


Q ss_pred             HHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250          386 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH  465 (514)
Q Consensus       386 aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  465 (514)
                      ++++++|++++++++.+++++++++|++.|+.+.+++.+.++||.|+++++++.++.           ....+...|+++
T Consensus       315 aaa~aaL~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ie~~~~~-----------~~~~~~~~~~~~  383 (422)
T PRK05630        315 AVAHASLEIIETGMWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVEMEQPV-----------DMEEATQAAVDH  383 (422)
T ss_pred             HHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEEEEECCcc-----------cHHHHHHHHHHC
Confidence            999999999998899999999999999999988667889999999999999996431           134577899999


Q ss_pred             CcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          466 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       466 Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      |+++.+.++.+||.||+++|++|||+++++|++++..
T Consensus       384 Gl~~~~~g~~l~~~PpL~it~~~i~~~~~~l~~al~~  420 (422)
T PRK05630        384 GVWLRPFGRLVYVMPPYITTSEQIAQICAALAAAVKA  420 (422)
T ss_pred             CeEEEecCCEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence            9999988889999999999999999999999999853

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=100.00  E-value=1.6e-72  Score=587.78  Aligned_cols=407  Identities=28%  Similarity=0.485  Sum_probs=339.7

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.+|+++....+.. ..+++...+++++|++.++...
T Consensus        40 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~~-~~~~~~~~~lAe~L~~~~p~~~  118 (459)
T PRK06931         40 LPLAIAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTL-DLTTPLKDAFSEYLLSLLPGQG  118 (459)
T ss_pred             CCceEEeccccEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhcccccc-ccCCHHHHHHHHHHHHhCCCcc
Confidence            689999999999999999999999999999999999999999999999864322221 2356788999999999875321


Q ss_pred             --CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250          162 --MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY  239 (514)
Q Consensus       162 --~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  239 (514)
                        ...++|+|||+||||.|||+||.|      ++|.+||.++++|||++.+++++++.+.++..+.+..+.+.++++|+.
T Consensus       119 ~~~~~~f~~~SGsEAve~AlklAr~~------tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~  192 (459)
T PRK06931        119 KEYCLQFTGPSGADAVEAAIKLAKTY------TGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHE  192 (459)
T ss_pred             ccceEEEeCCCcHHHHHHHHHHHHHh------cCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCcc
Confidence              124566799999999999999988      578899999999999999999999887777767666677778888888


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHH--hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF  317 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~--~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~  317 (514)
                      +++++... .+.....+.+.+++.+.+  ..++++|+||+||+||++|+++|+++||++|+++|++||++||+|||||||
T Consensus       193 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGf  271 (459)
T PRK06931        193 YRCPLGIG-GEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGF  271 (459)
T ss_pred             ccccccCC-chhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcC
Confidence            77765322 122222233345555542  234679999999999999999999999999999999999999999999999


Q ss_pred             ccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh
Q 010250          318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE  397 (514)
Q Consensus       318 gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~  397 (514)
                      ||+|++|+++++|++|||+|+||+|+|| +|+|++++++++ +.+.       ...|++||++||++|++|+++|+++++
T Consensus       272 GRtG~~~a~~~~gv~PDivt~gK~l~gG-~Pi~av~~~~~~-~~~~-------~~~~~~T~~gnpla~aaala~L~~l~~  342 (459)
T PRK06931        272 ARTGKMFAFEHAGIEPDIIVMSKAVGGG-LPLAVLGIKKEF-DAWQ-------PGGHTGTFRGNQLAMATGLTTLKILKE  342 (459)
T ss_pred             CcCchHHHhhhcCCCCCEEEecccccCC-cceeeeeeHHHH-hhcc-------CCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999 899999988774 6553       235889999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCC---CCCCccchHHHHHHHHHHCCcEEEee-
Q 010250          398 RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNE---PFPPEWGIGAYFGAQCEKHGMLVRVS-  472 (514)
Q Consensus       398 ~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~Gv~~~~~-  472 (514)
                      +++.+++++++++|+++|+++ .++|++.+++|.|+|++++|.++.....   ..+.+......+...|+++|+++.+. 
T Consensus       343 ~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~  422 (459)
T PRK06931        343 ENLAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGG  422 (459)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecC
Confidence            999999999999999999998 5789999999999999999975432211   11112234567888999999999765 


Q ss_pred             --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          473 --GDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       473 --g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                        ++.+||.||+++|++|||+++++|++++.++.+
T Consensus       423 ~~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~~~  457 (459)
T PRK06931        423 RNGNVVRLLPPLLITQAECEEFIDRFEQALLAAVK  457 (459)
T ss_pred             CCCCEEEEECCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence              467999999999999999999999999987543

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=4.6e-72  Score=583.40  Aligned_cols=401  Identities=26%  Similarity=0.466  Sum_probs=341.6

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+||||.|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+.. ..+++...+|+++|++.++ .+
T Consensus        35 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~~~~~~-~~~~~~~~~lae~L~~~~p-~~  112 (457)
T PRK05639         35 FPLVPKRGFGALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIG-YTHSERAIRVAEKLAEISP-IE  112 (457)
T ss_pred             CCceEEeeecCEEEeCCCCEEEECCcCHHhhccCCCCHHHHHHHHHHHHhccccccC-ccCCHHHHHHHHHHHhhCC-CC
Confidence            689999999999999999999999999999999999999999999999987544322 2245778899999999874 34


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccccCCCCCCCCcccccCCCCcc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      .++|+|++||+||||+|+|+||.|      ++|.+||.++++|||+|.+++++++. +.++..+.+..+.+..+++|+.+
T Consensus       113 ~~~v~f~~SGsEA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~  186 (457)
T PRK05639        113 NPKVLFGLSGSDAVDMAIKVSKFS------TRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPY  186 (457)
T ss_pred             cCEEEEeCchHHHHHHHHHHHHHh------cCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccc
Confidence            579999999999999999999987      57889999999999999999988775 33455566555666777777666


Q ss_pred             cCCCCC---CChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc
Q 010250          241 RYAHPG---ETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC  315 (514)
Q Consensus       241 ~~~~~~---~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t  315 (514)
                      +.+...   ++.+.+...+++.+++++...  .++++|+||+||+|+++|+++||++||++|+++|++||++||+|||||
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~t  266 (457)
T PRK05639        187 RNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQT  266 (457)
T ss_pred             cccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence            543321   123444455567788776432  357899999999999999999999999999999999999999999999


Q ss_pred             CcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250          316 AFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY  395 (514)
Q Consensus       316 G~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~  395 (514)
                      ||||+|++|+++++|++||++++||+|+|| +|+|++++++++++...      +  .+++|+++||++|++++++|+++
T Consensus       267 G~GrtG~~~a~~~~gv~PDiv~~gK~l~gG-~pi~av~~~~~i~~~~~------~--~~~~T~~g~p~~~aaa~a~l~~l  337 (457)
T PRK05639        267 GIGRTGKWFASEWFEVKPDLIIFGKGVASG-MGLSGVIGRKELMDLTS------G--SALLTPAANPVISAAAEATLEII  337 (457)
T ss_pred             ccCcCchHHHHHhcCCCCCEEEechhhcCC-CcceeEEehHHHHhhcC------C--CcccCCCcCHHHHHHHHHHHHHH
Confidence            999999999999999999999999999999 79999999999998322      1  35689999999999999999999


Q ss_pred             hhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-
Q 010250          396 KERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-  473 (514)
Q Consensus       396 ~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-  473 (514)
                      +++++.+++++++++|+++|+++ .+++++.++||.|+|+++++..+...     ........+...|+++|+++.+.+ 
T Consensus       338 ~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~-----~~~~~~~~~~~~~~~~Gv~~~~~g~  412 (457)
T PRK05639        338 EEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGK-----PDPELTGKICWRAFELGLILPSYGM  412 (457)
T ss_pred             HHccHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCC-----CCHHHHHHHHHHHHhCCeEEeecCC
Confidence            99999999999999999999998 56899999999999999999653211     112245678899999999998753 


Q ss_pred             --CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          474 --DNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       474 --~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                        +.|||.||+++|++|||+++++|+++++.+.
T Consensus       413 ~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~~~  445 (457)
T PRK05639        413 FGNVIRITPPLVITKEIAEKGLEIMERAIKDAL  445 (457)
T ss_pred             CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHH
Confidence              6899999999999999999999999998764

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=1.8e-71  Score=579.86  Aligned_cols=401  Identities=27%  Similarity=0.468  Sum_probs=344.2

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||.|||+||||.++ |+++|||+||+|++|+.+|++++.+...  ..+++...+|+++|+++++ .+
T Consensus        54 ~~~~i~~a~G~~l~D~dG~~ylD~~g~-~~~~lGh~~p~v~~Ai~~ql~~~~~~~~--~~~~~~~~~lae~L~~~~p-~~  129 (459)
T PRK06082         54 CLDVLASAEGIYIEDVDGKKYMDFHGN-NVHQLGYGHPHVIEKVKEQMAKLPFSPR--RFTNETAIECAEKLTEIAG-GE  129 (459)
T ss_pred             CCceEEeeeeeEEEECCCCEEEEcccH-hhcccCCCCHHHHHHHHHHHHhCCCccC--ccCCHHHHHHHHHHHHhCC-CC
Confidence            578999999999999999999999854 8899999999999999999998765432  2357889999999999974 34


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      +++++|++||+||++.|+|+|+.|      ++|.+||+++++|||++.+++++++.+.++..+++..+.+.+++.|..++
T Consensus       130 ~~~v~f~~sGseAve~AlklAr~~------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  203 (459)
T PRK06082        130 LNRVLFAPGGTSAIGMALKLARHI------TGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYR  203 (459)
T ss_pred             CCEEEECCCcHHHHHHHHHHHHHh------cCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccc
Confidence            689999999999999999999988      56889999999999999999999988777777776667777788777666


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                      .++..  .+.+...+++++++++.+  .+++++||+||+||++ .++|+++||++|+++|++||++||+|||||||||+|
T Consensus       204 ~~~~~--~~~~~~~~~~~l~~~i~~--~~~vAavIvEPv~g~g-~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG  278 (459)
T PRK06082        204 GAFPD--ADGSDVHYADYLEYVIEK--EGGIGAFIAEAVRNTD-VQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTG  278 (459)
T ss_pred             cccCC--hhHHHHHHHHHHHHHHhc--CCCEEEEEECCccCCC-CcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc
Confidence            54332  244455567888888864  2579999999999985 678899999999999999999999999999999999


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~  401 (514)
                      ++|+++++|+.||++|+||+|+||++|+|++++++++++.+.      ..+.| +||++||++|++++++|++++++++.
T Consensus       279 ~~fa~e~~gv~PDiv~~gKgl~gG~~P~~av~~~~~i~~~~~------~~~~~-~T~~gnpl~~aaa~a~L~~l~~~~l~  351 (459)
T PRK06082        279 EWFTHQAYGIEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQ------ISLGH-YTHEKSPLGCAAALATIEVIEQEGLL  351 (459)
T ss_pred             hhhHhHhhCCCCCEEEecccccCCCCcceEEEEcHHHHhhcc------CCCCC-CCCCcCHHHHHHHHHHHHHHHhcCHH
Confidence            999999999999999999999999789999999999876543      12345 79999999999999999999988999


Q ss_pred             HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEEEe
Q 010250          402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMMS  479 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iRi~  479 (514)
                      +++++++++|+++|+++ .+++.+.++||.|+|++++|..+.....+   .......+...|+++|+++.+. ++.|||+
T Consensus       352 ~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~---~~~~~~~~~~~~~~~Gvl~~~~~~~~i~~~  428 (459)
T PRK06082        352 EKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKER---AYDEAEAVLYRCLNNGLSFKVSQGNVIQLS  428 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCeeeeeeccceeEEEEccCccccCc---cHHHHHHHHHHHHhCCCEEEecCCCEEEEe
Confidence            99999999999999998 56899999999999999999754322111   1123566788999999999875 6789999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKALKATEERV  507 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l~~~~~~~  507 (514)
                      ||+++|++|||++++++++++.++.+++
T Consensus       429 Ppl~it~~eid~~~~~l~~~l~~~~~~~  456 (459)
T PRK06082        429 PPLIITREELTQALAILEEAIAKICQDF  456 (459)
T ss_pred             CCCccCHHHHHHHHHHHHHHHHHHhhhc
Confidence            9999999999999999999998886654

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=100.00  E-value=2e-71  Score=578.92  Aligned_cols=408  Identities=27%  Similarity=0.470  Sum_probs=338.9

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC-
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS-  160 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~-  160 (514)
                      .|+++++++|+|+||.|||+||||.+|+|+++|||+||+|++|+.+|++++.+.+.. ..+++...+|+++|++.++.. 
T Consensus        21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~   99 (442)
T TIGR00709        21 LPTAFAKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHTL-DLTTPLKDAFIEALLNIIPKRK   99 (442)
T ss_pred             CCceEEeccccEEEeCCCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCcccc-ccCcHHHHHHHHHHHHhCCCcC
Confidence            578999999999999999999999999999999999999999999999986544332 235788899999999998532 


Q ss_pred             -CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250          161 -KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY  239 (514)
Q Consensus       161 -~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  239 (514)
                       ....++|+|||+||||.|||+||.|      ++|.+||+++++|||++.+++++++.+.++.++.+..+.+..+++|+.
T Consensus       100 ~~~~~~f~~~sGsEA~e~AlklAr~~------tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~  173 (442)
T TIGR00709       100 MDYKLQFPGPSGADAVEAAIKLAKTY------TGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHE  173 (442)
T ss_pred             CCccEEEeCCCHHHHHHHHHHHHHHh------cCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCcc
Confidence             1234566799999999999999988      568899999999999999999999876666666655566666777776


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHH--hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF  317 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~--~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~  317 (514)
                      ++.++.. ..+.......+.+++.+.+  ..++++++||+||+|+++|+++||++||++|+++|++||++||+|||||||
T Consensus       174 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGf  252 (442)
T TIGR00709       174 YRCPFGI-GGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGF  252 (442)
T ss_pred             ccccccC-CchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC
Confidence            6654321 1122222233445555432  234679999999999999999999999999999999999999999999999


Q ss_pred             ccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh
Q 010250          318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE  397 (514)
Q Consensus       318 gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~  397 (514)
                      ||+|++|+++++|+.||++|+||+|+|| +|+|+++++++ ++.+.       ...|++||++||++|++++++|+++++
T Consensus       253 GRtG~~~a~~~~gv~PDiv~~gK~l~~G-~Pigav~~~~~-~~~~~-------~~~~~~T~~gnpla~aaa~a~L~~i~~  323 (442)
T TIGR00709       253 GRSGTMFAFEHAGIEPDFVVMSKAVGGG-LPLAVLLIAPE-FDAWQ-------PAGHTGTFRGNQLAMVTGTEALNYWKD  323 (442)
T ss_pred             CCCCchhHHHHcCCCCcEEEEcccccCC-cccEEEEEchH-HhccC-------CCcCCCCCCcCHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999998 89999999988 45543       235789999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCC---CCCCccchHHHHHHHHHHCCcEEEee-
Q 010250          398 RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNE---PFPPEWGIGAYFGAQCEKHGMLVRVS-  472 (514)
Q Consensus       398 ~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~Gv~~~~~-  472 (514)
                      +++.+++++++++|++.|+++ .+++.+.++||.|+|++++|.++..+..   +...+......+...|+++|+++.+. 
T Consensus       324 ~~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~  403 (442)
T TIGR00709       324 DNLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGG  403 (442)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecC
Confidence            999999999999999999998 5789999999999999999975432211   11112234667888999999999765 


Q ss_pred             --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250          473 --GDNIMMSPPFIMSPEEVDELISKYGKALKATEER  506 (514)
Q Consensus       473 --g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~  506 (514)
                        ++.|||.||+++|++||++++++|++++.++.+.
T Consensus       404 ~~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~~~  439 (442)
T TIGR00709       404 REGEVFRLLCPITIDQEECEEGISRFKQAVEEALAE  439 (442)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence              5789999999999999999999999999876443

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=2.9e-71  Score=578.43  Aligned_cols=399  Identities=27%  Similarity=0.480  Sum_probs=334.4

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.. +...+++...+++++|++.++...
T Consensus        38 ~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~-~~~~~~~~~~~la~~l~~~~p~~~  116 (443)
T PRK06058         38 LPVYVARAGGGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTC-FMVTPYEGYVAVAEQLNRLTPGDH  116 (443)
T ss_pred             CCceEEeeeeeEEEeCCCCEEEEcCcchhhhccCCCCHHHHHHHHHHHHhccCcc-ccccCCHHHHHHHHHHHHhCCCCC
Confidence            6889999999999999999999999999999999999999999999999865432 223357888999999999875333


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCcc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      .++++|++||+|||+.|+|+||.|      ++|++||+++++|||++.+++++++.. .++.++.+..+.+.++++|..+
T Consensus       117 ~~~v~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (443)
T PRK06058        117 EKRSALFNSGAEAVENAVKIARSY------TGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPY  190 (443)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHh------hCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCccc
Confidence            479999999999999999999988      567899999999999999999988743 3455555444555556665555


Q ss_pred             cCCCC-CCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          241 RYAHP-GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       241 ~~~~~-~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                      +.... ....++....+.+.+++.+   .++++|+||+||+|+++|+++|+++||++|+++|++||++||+|||||||||
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgR  267 (443)
T PRK06058        191 RDPKGLATDGEEAAARAITVIEKQV---GADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFAR  267 (443)
T ss_pred             ccccccccchHHHHHHHHHHHHHhh---CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence            43211 1111222222334444433   2468999999999999999999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|++|+++++|+.||++|+||+|+|| +|+|++++++++++.+..       ..|++||++||++|++++++|+++++++
T Consensus       268 tG~~fa~~~~gv~PDiv~~gK~l~~G-~Pi~av~~~~~i~~~~~~-------~~~~~T~~gnpl~~aaa~a~L~~~~~~~  339 (443)
T PRK06058        268 TGAWFACEHEGIVPDLITTAKGIAGG-LPLSAVTGRAEIMDAPHP-------GGLGGTYGGNPVACAAALAAIETIEEDD  339 (443)
T ss_pred             ChhhhHHHhcCCCCCEEEEcccccCC-CccEEEEEcHHHHhhccC-------CCCCCCCCCCHHHHHHHHHHHHHHHHcC
Confidence            99999999999999999999999998 899999999999998863       2578999999999999999999999899


Q ss_pred             HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CCE
Q 010250          400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDN  475 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~  475 (514)
                      +.+++++++++|+++|+++ .+++++.+++|.|+|+++++.++... .   ........+...|+++||++.+.   ++.
T Consensus       340 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~-~---~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~  415 (443)
T PRK06058        340 LVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTT-E---PDAELTKALAAAAHAAGVIVLTCGTYGNV  415 (443)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCC-C---CcHHHHHHHHHHHHHCCeEEeccCCCCCE
Confidence            9999999999999999998 56789999999999999999754211 1   12234667888999999999864   468


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      |||.||+++|++||++++++|++++++
T Consensus       416 lr~~Ppl~~t~~~i~~~~~~l~~~l~~  442 (443)
T PRK06058        416 IRLLPPLVIGDELLREGLDVLEAALAD  442 (443)
T ss_pred             EEEECCCccCHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999865

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=9.9e-71  Score=573.23  Aligned_cols=404  Identities=27%  Similarity=0.486  Sum_probs=344.2

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||.|||+||||.+++|+.+|||+||+|.+|+.+|++++.+.+.. ...++...+++++|++.++...
T Consensus        24 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~  102 (445)
T PRK08593         24 YPLVIDHGYGATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPA-YMYHEPLVRLAKKLCELAPGDF  102 (445)
T ss_pred             CCceEEeeeeCEEEeCCCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCcccc-ccCCHHHHHHHHHHHHhCCCCC
Confidence            578999999999999999999999999999999999999999999999987654332 2357888999999999975332


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCcc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      .++|+|++||+||||+|||+||.|      ++|.+||.++++|||++.+++++++.. .++..+++..+.+.++++|+.+
T Consensus       103 ~~~v~f~~SGseA~e~AiklAr~~------tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~  176 (445)
T PRK08593        103 EKRVTFGLSGSDANDGIIKFARAY------TGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKY  176 (445)
T ss_pred             CCEEEECCchHHHHHHHHHHHHHh------hCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccc
Confidence            369999999999999999999988      568899999999999999999988854 3445566556667778888777


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHh-CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~~-~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                      +.+....+ ++....+++++++++.+. .++++++||+||+++++|+++|+++||++|+++|++||++||+|||||||||
T Consensus       177 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~Gr  255 (445)
T PRK08593        177 RGMYEEPD-ANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGR  255 (445)
T ss_pred             cccccCCc-HHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCc
Confidence            65433222 233344456777766542 3468999999999999999999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|++|+++++|+.||++|+||+++|| +|+|++++++++++.+..       ..+++|+++||++|++++++|+++++++
T Consensus       256 tG~~~a~~~~gv~pDi~t~gK~l~~G-~p~gav~~~~~i~~~~~~-------~~~~~T~~~~pl~~aaa~a~l~~l~~~~  327 (445)
T PRK08593        256 TGKWSSISHFNITPDLMSFGKSLAGG-MPMSAIVGRKEIMESLEA-------PAHLFTTGANPVSCAAALATIDMIEDES  327 (445)
T ss_pred             CchHHHHHhcCCCCCEeeecccccCC-cccEEEEEcHHHHhhhcc-------CCCCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999998 899999999999998852       2467899999999999999999999989


Q ss_pred             HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEE
Q 010250          400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIM  477 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iR  477 (514)
                      +.+++++++++|++.|+++ .+++++.+++|.|+++++++..+.....  + .......+...|+++||++.+. ++.+|
T Consensus       328 l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~--~-~~~~~~~~~~~~~~~Gv~~~~~~~~~lr  404 (445)
T PRK08593        328 LLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKT--R-DNEAALKICNYCFEHGVVIIAVAGNVLR  404 (445)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCC--C-cHHHHHHHHHHHHHCCeEEeccCCCEEE
Confidence            9999999999999999998 5689999999999999999975322111  1 1224567889999999999764 57899


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      |+||+++|++||++++++|+++++++.
T Consensus       405 ~~p~l~~t~~~id~~~~~l~~~l~~~~  431 (445)
T PRK08593        405 FQPPLVITYEQLDTALNTIEQAFTALE  431 (445)
T ss_pred             EECCCccCHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999998764

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=100.00  E-value=1.6e-69  Score=563.55  Aligned_cols=412  Identities=27%  Similarity=0.516  Sum_probs=347.3

Q ss_pred             cccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchH
Q 010250           67 DMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS  146 (514)
Q Consensus        67 ~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~  146 (514)
                      .+|+|+.....  .+.|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+. ...+++..
T Consensus        11 ~~~~~~~~~~~--~~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~   87 (423)
T PRK05964         11 HVWHPYTQMKL--HPPPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIF-AGFTHEPA   87 (423)
T ss_pred             ceecCCCCccc--cCCCeeEEeccccEEEeCCCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccc-cccCCHHH
Confidence            35667654322  1368999999999999999999999999999999999999999999999998764422 13367888


Q ss_pred             HHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCC
Q 010250          147 LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDL  226 (514)
Q Consensus       147 ~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~  226 (514)
                      .+++++|++.++ .++++|+|++||+||||.|+|+||.|+..++.++|.+||.++++|||++.+++++++.+.++..+..
T Consensus        88 ~~la~~l~~~~p-~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~  166 (423)
T PRK05964         88 ERLAQRLVALTP-GGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTP  166 (423)
T ss_pred             HHHHHHHHHhCC-CCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccC
Confidence            999999999974 3578999999999999999999999987777788999999999999999999998887655544443


Q ss_pred             CCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHhcC
Q 010250          227 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYD  305 (514)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~~~g  305 (514)
                      ..+.+..+++|+.           ++...+++++++++.+. ++++++||+|| +++++|+++|+++||++|+++|++||
T Consensus       167 ~~~~~~~~~~~~~-----------d~~~~~~~~l~~~l~~~-~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g  234 (423)
T PRK05964        167 LLFEQVTAPFPPD-----------GYEQATLDALEALLEKH-AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHG  234 (423)
T ss_pred             cCCCCEEeCCCcc-----------hhHHHHHHHHHHHHHhC-CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcC
Confidence            2233334444421           12233467888887643 46899999999 69999999999999999999999999


Q ss_pred             CEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHH
Q 010250          306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC  385 (514)
Q Consensus       306 illI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~  385 (514)
                      ++||+|||||||||+|++|+++++++.||++++||+|+||++|+|++++++++++.+.... ..+.+.|++||++||++|
T Consensus       235 ~llI~DEv~tg~gr~G~~~a~~~~~v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~-~~~~~~~~~T~~~np~~~  313 (423)
T PRK05964        235 VLLIFDEIATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDD-RAKAFMHSPSYTANPLAC  313 (423)
T ss_pred             CEEEEechhhCCCcCcchhHHHhcCCCCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCC-cccccccCCCCCcCHHHH
Confidence            9999999999999999998999999999999999999999889999999999999885321 113456889999999999


Q ss_pred             HHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250          386 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH  465 (514)
Q Consensus       386 aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  465 (514)
                      ++++++|++++++++.++++++++++++.|+++..++.+.++++.|+++++++.+....        .....+...|+++
T Consensus       314 aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~~--------~~~~~l~~~l~~~  385 (423)
T PRK05964        314 AAANASLDLFEDEPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVLE--------RDGPALRAFALER  385 (423)
T ss_pred             HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcch--------hHHHHHHHHHHHC
Confidence            99999999999889999999999999999998866788888999999999999653210        1245688899999


Q ss_pred             CcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          466 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       466 Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ||++.+.++.|||+||+++|++|||+++++|+++++++
T Consensus       386 Gv~v~~~~~~lR~~p~l~~t~edId~~v~~l~~al~~~  423 (423)
T PRK05964        386 GVLLRPLGNTIYLMPPYIITAEELDRITDAIVEVADEL  423 (423)
T ss_pred             CeEEEecCCEEEEeCCcccCHHHHHHHHHHHHHHHhhC
Confidence            99999888899999999999999999999999998753

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=1.4e-69  Score=564.02  Aligned_cols=400  Identities=33%  Similarity=0.570  Sum_probs=341.5

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||+|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+. ...+++...+|+++|++.++...
T Consensus        36 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~-~~~~~~~~~~lAe~L~~~~p~~~  114 (441)
T PRK05769         36 YPLVIERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAEKFLHYSL-TDFYYEPAVELAERLVEIAPGGF  114 (441)
T ss_pred             CCeeEEecceEEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhccCccC-cccCCHHHHHHHHHHHHhCCCCC
Confidence            68899999999999999999999999999999999999999999999998654322 12356788999999999875334


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccccCCCCCCCCcccccCCCCcc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      +++|+|++||+||||.|+|+||.|      ++|.+||.++++|||++.+++++++. +..+..|.+..+.+.++++|+.+
T Consensus       115 ~~~v~f~~SGsEA~e~AlklAr~~------tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (441)
T PRK05769        115 EKKVFFTNSGTESNEAAIKIARYH------TGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPY  188 (441)
T ss_pred             CCEEEECCchHHHHHHHHHHHHHH------hCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccc
Confidence            689999999999999999999988      56889999999999999999988764 34555566556677778888777


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHH--hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG  318 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~--~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g  318 (514)
                      +.++...+.+++...+++.+++++.+  ..++++++||+||+++++|+++|+++||++|+++|++||+++|+||||||||
T Consensus       189 ~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~g  268 (441)
T PRK05769        189 RNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMG  268 (441)
T ss_pred             cccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence            66543233444555567778884433  2457899999999999999999999999999999999999999999999999


Q ss_pred             cccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc
Q 010250          319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER  398 (514)
Q Consensus       319 r~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~  398 (514)
                      |+|++|+++++|+.||+++|||+++|| +|+|++++++++++.+.        ..|++||++||++|++++++|+++++ 
T Consensus       269 r~G~~~a~~~~gv~pDivt~~K~l~~G-~p~gav~~~~~i~~~~~--------~~~~~T~~g~p~~~aaa~a~L~~l~~-  338 (441)
T PRK05769        269 RTGKMFAIEHFGVEPDIITLAKAIAGG-LPLGAVIGRAELMFLPP--------GSHANTFGGNPVAAAAALATLEELEE-  338 (441)
T ss_pred             cccceehhhccCCCCCEEEEcccccCC-cccEEEEEehhhhhcCC--------CCCCCCCCcCHHHHHHHHHHHHHHHH-
Confidence            999999999999999999999999998 89999999999975432        25789999999999999999999998 


Q ss_pred             cHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEE
Q 010250          399 NIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNI  476 (514)
Q Consensus       399 ~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~i  476 (514)
                      ++.+++++++++|+++|+++ .+++++.+++|.|++++++|.++..  .+   .......+...|+++|+++.+.+ +.+
T Consensus       339 ~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~--~~---~~~~~~~~~~~~~~~Gil~~~~~~~~l  413 (441)
T PRK05769        339 GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRK--EP---DPKLRDKVLYEAFKRGLLLLGAGKSAI  413 (441)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCc--cc---cHHHHHHHHHHHHhCCcEEecCCCCEE
Confidence            99999999999999999998 5688999999999999999965421  11   11245668889999999998766 679


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          477 MMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       477 Ri~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ||+||+++|++|||+++++|++++.++
T Consensus       414 r~~p~l~~t~~~id~~~~~l~~~l~~~  440 (441)
T PRK05769        414 RIIPPLIITEEEADIGLEILEEAIKEL  440 (441)
T ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999998653

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=100.00  E-value=2e-69  Score=588.84  Aligned_cols=431  Identities=24%  Similarity=0.341  Sum_probs=347.7

Q ss_pred             CccccCCccccccCCCCCCeEEEeeeCc----EEEeCCCC----EEEEccCCcccccCC-CCCHHHHHHHHHHHhcCCcc
Q 010250           65 GHDMLAPFTAGWQSTDVHPLVIEKSEGS----YVYDVNGK----KYLDSLAGLWCTALG-GSEPRLVAAATAQLNTLPFY  135 (514)
Q Consensus        65 ~~~~~~p~~~~~~~~~~~p~~~~~~~G~----~~~d~dG~----~ylD~~s~~~~~~lG-h~~p~v~~A~~~~l~~~~~~  135 (514)
                      ...+|+||++........|.+|++++|.    |++|.||+    +|||+.+++|++++| |+||+|.+|+.+|++++.+.
T Consensus       322 ~~~iw~Pftq~~~~~~~~~~vi~~a~G~~~~~~~~d~~G~~~~~~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~hv  401 (817)
T PLN02974        322 GEVLWWPFTQHALVPRDSVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWWTQGPDPTLQPELARAVAYAAGRYGHV  401 (817)
T ss_pred             hhhccCCcccccccCCCCceEEEeeecCceeEEEECCCCCcccceEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCcc
Confidence            3447999999765543457899999998    99999998    999999999999999 68999999999999998776


Q ss_pred             ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHH-HHHhhcCCC------------CccEEEEEec
Q 010250          136 HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVW-YYNNALGRP------------NKKKFIARQK  202 (514)
Q Consensus       136 ~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~-~~~~~~~~~------------~~~~ii~~~~  202 (514)
                      + +.+.++++..+|+++|++..+...+++|+|++||+||||.|||+|+ +|+...|.+            +|.+||.+.+
T Consensus       402 ~-~~~~~hepa~~LAe~L~~~~~~~~l~rVffs~sGSeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~g  480 (817)
T PLN02974        402 M-FPENVHEPALRAAELLLGGPGKGWASRVFFSDNGSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDG  480 (817)
T ss_pred             c-cCccCCHHHHHHHHHHHhccCCCCCCEEEECCchHHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECC
Confidence            4 3355789999999999995321337899999999999999999995 476655543            5889999999


Q ss_pred             CCcccceeeeecCCCccccCCCC-C-CCCcccccCCCCc--------------ccCCCCC---------------CChhH
Q 010250          203 SYHGSTLIAASLSGLPALHQKFD-L-PAPFVLHTDCPHY--------------WRYAHPG---------------ETEEE  251 (514)
Q Consensus       203 ~yHG~t~~~~~~s~~~~~~~~~~-~-~~~~~~~~~~~~~--------------~~~~~~~---------------~~~~~  251 (514)
                      +|||.|++++++++.+.++..|. + ..+...+++.|..              |+.....               .+.++
T Consensus       481 sYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~  560 (817)
T PLN02974        481 SYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTP  560 (817)
T ss_pred             CcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccccccccccCCccccccccccccccccccccccccccchh
Confidence            99999999999998766655442 1 1222333333322              1111000               01123


Q ss_pred             HHHHHHHHHHHHHHH----hCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee
Q 010250          252 YSTRLANNLEDLILK----EGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC  326 (514)
Q Consensus       252 ~~~~~~~~le~li~~----~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~  326 (514)
                      +...+.+.+++.|.+    .+++++|+||+||+ ||.||+++|+++|+++|+++|++||++||+|||+|||||+|++|++
T Consensus       561 ~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~  640 (817)
T PLN02974        561 LAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAW  640 (817)
T ss_pred             hhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhH
Confidence            344556778887764    34578999999995 8999999999999999999999999999999999999999999999


Q ss_pred             cccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc----HHH
Q 010250          327 DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN----IVE  402 (514)
Q Consensus       327 ~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~----~~~  402 (514)
                      +++|++|||+|+||+|+||++|+|++++++++++.+.... ..+.+.|++||++||++|++|+++|+++++++    +.+
T Consensus       641 e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~-~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~  719 (817)
T PLN02974        641 ELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPS-KLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIP  719 (817)
T ss_pred             HhcCCCCCEEeecccccCCCCccEEEEEcHHHHHhhcccc-ccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHH
Confidence            9999999999999999999889999999999999986311 11356799999999999999999999999875    445


Q ss_pred             HHHHHHHHHHhhh-hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeCCEEEEeC
Q 010250          403 QVNKIAPKFQDGV-KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSGDNIMMSP  480 (514)
Q Consensus       403 ~~~~~~~~l~~~L-~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g~~iRi~p  480 (514)
                      +.+++++++.+.| +.+.++|.+.++||.|+|++++|.++... .++  ....+..+.+.|+ ++|+++++.|+.|++.|
T Consensus       720 ~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~iel~~~~~~-~~~--~~~~a~~v~~~~~~~~Gl~~r~~Gnvi~l~p  796 (817)
T PLN02974        720 PGSRLRELWDEELVRAISSLPNVERVVSLGTVLALELDAEGSG-SGY--SSLYARSVVRRLRREDGIYARPLGNVVYLMC  796 (817)
T ss_pred             HHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEEEecCCcc-ccc--chHHHHHHHHHHHHhCCEEEEecCCEEEEeC
Confidence            5566666667777 44566899999999999999999765432 222  2234567888899 99999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHHHHH
Q 010250          481 PFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       481 ~~~~t~e~id~~~~~l~~~l  500 (514)
                      |+.++++++++++++|.+.|
T Consensus       797 P~~i~~e~l~~~~~~l~~~~  816 (817)
T PLN02974        797 GPTTSPETCTRLLRKVYRRL  816 (817)
T ss_pred             CCCCCHHHHHHHHHHHHHHh
Confidence            99999999999999998876

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=3.7e-69  Score=558.26  Aligned_cols=396  Identities=25%  Similarity=0.430  Sum_probs=337.3

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++|+|+|+||+|||+||||.+|+|+++|||+||+|.+|+.+|++++.+... ...+++...+++++|++.++...
T Consensus        22 ~p~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~-~~~~~~~~~~la~~l~~~~p~~~  100 (425)
T PRK07495         22 TQIYADRAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCH-QVVPYENYVRLAERLNALVPGDF  100 (425)
T ss_pred             CCeeEEeeeecEEEeCCCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCccc-CccCCHHHHHHHHHHHHhCCCCC
Confidence            47899999999999999999999999999999999999999999999998765422 13357788999999999875322


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccccCCCCCCCCcccccCCCCcc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      .++|+|++||+||||.|+|+||.|      ++|.+||.++++|||++.+++++++. ..++..|.+..+.+.++++|+.+
T Consensus       101 ~~~v~f~~SGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (425)
T PRK07495        101 AKKTIFVTTGAEAVENAVKIARAA------TGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL  174 (425)
T ss_pred             CCEEEECCchHHHHHHHHHHHHHh------hCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc
Confidence            479999999999999999999988      56789999999999999999888875 34556666555666677776543


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHH-hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILK-EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~-~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                      +.    .+    ...+++++++++.. ..++++++||+||+++++|++++|++|+++|+++|++||+++|+||||+||||
T Consensus       175 ~g----~~----~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr  246 (425)
T PRK07495        175 HG----VS----VEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFAR  246 (425)
T ss_pred             cc----cc----HHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCc
Confidence            32    11    11235667777753 24568999999999999999999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|++|+++++++.||+++|||+|+|| +|+|++++++++++.+..       ..+++||++||++|++++++|+++++++
T Consensus       247 ~G~~~a~~~~gv~pDi~tlsK~l~~G-~pigav~~~~~i~~~~~~-------~~~~~T~~~~pl~~aaa~a~l~~l~~~~  318 (425)
T PRK07495        247 TGKLFAMEHHEVAADLTTMAKGLAGG-FPLAAVTGRAEIMDAPGP-------GGLGGTYGGNPLGIAAAHAVLDVIEEED  318 (425)
T ss_pred             CCCceeecccCCCCCEEeehhhhcCC-ccceEEEEcHHHHhccCC-------CCcCCCCCCCHHHHHHHHHHHHHHHhch
Confidence            99999999999999999999999998 799999999999988753       2577899999999999999999999889


Q ss_pred             HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CCE
Q 010250          400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDN  475 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~  475 (514)
                      +.+++++++++|+++|+++ .++|.+.+++|.|+|++++|.+... ..+   .......+...|+++|+++.+.   ++.
T Consensus       319 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~-~~~---~~~~~~~~~~~~~~~Gvl~~~~g~~~~~  394 (425)
T PRK07495        319 LCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDADS-GLP---SAEFANRVRLKALEKGLILLTCGVHGNV  394 (425)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEecCCC-CCc---cHHHHHHHHHHHHHCCeEEeecCCCCCE
Confidence            9999999999999999998 5678899999999999999975431 111   1224567888999999999764   478


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      |||.||+++|++|+|+++++|+++++++.
T Consensus       395 ~r~~Ppl~it~~~id~~~~~l~~~l~~~~  423 (425)
T PRK07495        395 IRFLAPITIQDDVFAEALDILEASILEAS  423 (425)
T ss_pred             EEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999997654

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=7e-68  Score=552.94  Aligned_cols=400  Identities=32%  Similarity=0.521  Sum_probs=341.0

Q ss_pred             CeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCC
Q 010250           83 PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKM  162 (514)
Q Consensus        83 p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~  162 (514)
                      |+++++++|+|+||+|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+.. ...++...+|+++|+++++ .+.
T Consensus        26 ~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~-~~~~~~~~~la~~L~~~~~-~~~  103 (433)
T PRK08117         26 NLPVVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSG-VIYYESILKLAEELAEITP-GGL  103 (433)
T ss_pred             CceEEeeeeeEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcccc-ccCCHHHHHHHHHHHHhCC-CCC
Confidence            48899999999999999999999999999999999999999999999987554321 2356788999999999974 456


Q ss_pred             CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccccCCCCCCCCcccccCCCCccc
Q 010250          163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       163 ~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      ++++|+|||+|||+.|||+||.|      ++|.+||.++++|||++.+++++++. +.++..+.+..+.+.++++|+.++
T Consensus       104 ~~v~f~~SGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (433)
T PRK08117        104 DCFFFSNSGAEAIEGALKLAKHV------TKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDR  177 (433)
T ss_pred             CEEEEeCcHHHHHHHHHHHHHHh------cCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCcccc
Confidence            89999999999999999999988      56889999999999999999887764 444455555456667777776665


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHH-hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILK-EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL  320 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~-~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~  320 (514)
                      .+.. ...+.+..++++++++++.+ ..++++++||+||+++++|+++|+++||++|+++|++||++||+||||+||||+
T Consensus       178 ~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~  256 (433)
T PRK08117        178 CPKG-EDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRT  256 (433)
T ss_pred             cccc-CchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCcc
Confidence            4322 22344555678888888865 234689999999999999999999999999999999999999999999999999


Q ss_pred             cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250          321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI  400 (514)
Q Consensus       321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~  400 (514)
                      |++++++++|+.||++|+||+|++| +|+|++++++++++.+..       ..+++||++||++|++++++|+.++++++
T Consensus       257 G~~~~~~~~gv~pDi~t~sK~lg~G-~pigav~~~~~i~~~~~~-------~~~~~T~~~np~~~aaa~a~L~~l~~~~l  328 (433)
T PRK08117        257 GEWFAAQTFGVVPDIMTIAKGIASG-LPLSAVVASKELMEQWPL-------GSHGTTFGGNPVACAAALATLEVIKEEKL  328 (433)
T ss_pred             ccchhHhhcCCCCCEeehhhhccCC-CcceeEEEcHHHHhhccC-------CCCCCCCCcCHHHHHHHHHHHHHHHhccH
Confidence            9988889999999999999999988 899999999999988752       25788999999999999999999988899


Q ss_pred             HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CEE
Q 010250          401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNI  476 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~i  476 (514)
                      .++++++++++++.|+++ .+++++.+++|.|++++++|.++..  .   .+......+.+.|+++|+++.+.+   +.+
T Consensus       329 ~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~--~---~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~l  403 (433)
T PRK08117        329 LDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDG--E---PDGDAVEKILDKCLEKGLLFYLCGNAGNVL  403 (433)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCC--C---cchHHHHHHHHHHHHCCCEEeecCCCCCEE
Confidence            999999999999999988 5678888999999999999975431  1   111235567889999999987643   689


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          477 MMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       477 Ri~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      ||+||+.+|+++|++++++|+++++++.
T Consensus       404 Rl~p~~~~t~~~i~~~~~~l~~~l~~~~  431 (433)
T PRK08117        404 RMIPPLTVTKEEIDEGLDILDEALTEYE  431 (433)
T ss_pred             EEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999997664

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=100.00  E-value=5.1e-68  Score=546.91  Aligned_cols=383  Identities=31%  Similarity=0.534  Sum_probs=332.1

Q ss_pred             CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250           81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS  160 (514)
Q Consensus        81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~  160 (514)
                      +.|+++++++|+|+||+|||+||||.+++|+++|||+||+|.+|+.+|++++.+....  ..+++..+++++|++..+  
T Consensus        21 ~~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~la~~L~~~~~--   96 (408)
T PRK04612         21 PRQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSNV--FYSAPPLKLAEELVTASR--   96 (408)
T ss_pred             CCCceEEEeeeCEEEECCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccccc--cCCHHHHHHHHHHHhhCC--
Confidence            3788999999999999999999999999999999999999999999999987554332  256778999999999864  


Q ss_pred             CCCeEEEeCChhHHHHHHHHHHHHHHhhcCC-CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250          161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGR-PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY  239 (514)
Q Consensus       161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~-~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  239 (514)
                      ..++|+|++||+||||.|+|+||.|+..+++ ++|.+||.++++|||++.+++++++.+.++..+.+..+.+.++++++ 
T Consensus        97 ~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d-  175 (408)
T PRK04612         97 FAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFND-  175 (408)
T ss_pred             CCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCC-
Confidence            2479999999999999999999999766664 45778999999999999999999988777666653333333333321 


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                                       .+.+++++.   ++++++||+||+++++|++.|+++||++|+++|++||+++|+||||+||||
T Consensus       176 -----------------~~~l~~~~~---~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr  235 (408)
T PRK04612        176 -----------------VEALEAAMA---GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGR  235 (408)
T ss_pred             -----------------HHHHHHhhC---CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence                             366776663   468999999999999999999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|.+++.+++++.||+++|||++++| +|+|++++++++++.+..       ..+++||++||++|+++.++|+++++++
T Consensus       236 ~G~~~a~~~~~~~pdi~t~~K~l~~G-~piga~~~~~~~~~~~~~-------~~~~~t~~~~p~~~aaa~a~L~~~~~~~  307 (408)
T PRK04612        236 TGTLFAHWQEQVTPDIVTLAKALGGG-FPIGAMLAGPKVAETMQF-------GAHGTTFGGNPLAAAVARVALRKLASPQ  307 (408)
T ss_pred             CCchhhhhhcCCCCCEEEEcchhcCC-CceEEEEECHHHHhhhcC-------CCcCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence            99988888889999999999999988 899999999999888752       2577899999999999999999999899


Q ss_pred             HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEE
Q 010250          400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIM  477 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iR  477 (514)
                      +.+++++++++|+++|+++ .+++++.+++|.|+|++++|.....         .....+.+.|+++|+++.+.+ +.||
T Consensus       308 l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~~---------~~a~~i~~~l~~~Gvlv~~~g~~~lR  378 (408)
T PRK04612        308 IAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAHA---------GQAGAILDLAAEHGLLLLQAGPDVLR  378 (408)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCchh---------hHHHHHHHHHHHCCeEEeeCCCCEEE
Confidence            9999999999999999998 5678999999999999999963211         124568889999999998876 7899


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      +.||+.+|++||++++++|++++.++..
T Consensus       379 l~Ppl~it~eeid~~l~~l~~~l~~~~~  406 (408)
T PRK04612        379 FVPALNLTDAELADGLARLRLALADYVA  406 (408)
T ss_pred             EcCCccCCHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999977543

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=100.00  E-value=1.1e-67  Score=549.05  Aligned_cols=399  Identities=26%  Similarity=0.450  Sum_probs=337.7

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      +|+++++++|+|+||+|||+||||.+|+|+++|||+||+|.+|+.+|++++.+... ...+++...+++++|++.++..+
T Consensus        15 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~ql~~~~~~~~-~~~~~~~~~~la~~l~~~~p~~~   93 (420)
T TIGR00700        15 LPVFAARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCF-MVTPYEGYVALAEKLNRIAPGSG   93 (420)
T ss_pred             CCeeEEeeeeeEEEeCCCCEEEECccCHHhccCCCCCHHHHHHHHHHHHhccCccc-cccCChHHHHHHHHHHHhCCCCC
Confidence            68999999999999999999999999999999999999999999999998754322 12356778999999999885445


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCcc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      .++|+|++||+||||.|+|+||.|      ++|.+||.++++|||+|.+++++++.. .++.++++..+.+.++++|+.+
T Consensus        94 ~~~v~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (420)
T TIGR00700        94 PKKSVFFNSGAEAVENAVKIARSY------TGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPY  167 (420)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHh------cCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccc
Confidence            689999999999999999999988      567899999999999999999888753 3555666555666667777655


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHH-HhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLIL-KEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~-~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                      +..... ....+ ..+++.+++++. ...++++|+||+||+|+++|+++|+++|+++|+++|++||+++|+||||+||||
T Consensus       168 ~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr  245 (420)
T TIGR00700       168 RDGLLD-KQLST-DGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFAR  245 (420)
T ss_pred             cccccc-cchhH-HHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcc
Confidence            543221 11222 234667777764 234678999999999999999999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|++++++++++.||+++|||++++| +|+|++++++++++.+..       ..+++||++||++|++++++|+++++++
T Consensus       246 ~g~~~a~~~~~~~pDi~~lsK~l~~G-~pig~v~~~~~i~~~~~~-------~~~~~T~~~~pl~~aaa~a~l~~l~~~~  317 (420)
T TIGR00700       246 TGAMFACEHEGPEPDLITTAKSLADG-LPLSGVTGRAEIMDAPAP-------GGLGGTYAGNPLACAAALAVLAIIESEG  317 (420)
T ss_pred             cchhHHHhhcCCCCCEEEeeccccCC-cceEEEEecHHHHhhcCC-------CCcCCCCCcCHHHHHHHHHHHHHHHhcc
Confidence            99988999999999999999999988 899999999999988852       2578899999999999999999999889


Q ss_pred             HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CCE
Q 010250          400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDN  475 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~  475 (514)
                      +.++++++++++++.|+++ ..++.+..+++.|++++++|.+... ..   .....+..+.+.|+++||++.+.   ++.
T Consensus       318 ~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~-~~---~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~  393 (420)
T TIGR00700       318 LIERARQIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELVDPGT-TE---PDAGLAERIATAAHAAGLLLLTCGMFGNI  393 (420)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCEEEeeccceEEEEEEecCCC-CC---ccHHHHHHHHHHHHHCCeEEeccCCCCCE
Confidence            9999999999999999988 5678888999999999999964311 11   11234667888889999999875   468


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      |||+||+++|+++|++++++|++++.
T Consensus       394 lRl~p~l~~~~~~l~~~~~~l~~~l~  419 (420)
T TIGR00700       394 IRFLPPLTIGDELLSEGLDILCAILA  419 (420)
T ss_pred             EEEECCCCcCHHHHHHHHHHHHHHhh
Confidence            99999999999999999999998874

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=100.00  E-value=3.8e-68  Score=550.35  Aligned_cols=388  Identities=24%  Similarity=0.388  Sum_probs=315.7

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHH--HhcCCccccccccCCchHHHHHHHHHH----
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ--LNTLPFYHSFWNRTTKPSLDLAKELLE----  155 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~--l~~~~~~~~~~~~~~~~~~ela~~L~~----  155 (514)
                      +|+++++++|+||||+|||+||||++++|+++|||+||+|++|+.+|  ...+.+.+   ...+++..+++++|.+    
T Consensus        40 ~p~~~~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~~~l~~~~---~~~~~~~~~la~~l~~~l~~  116 (464)
T TIGR00699        40 FLADYEKSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTLINRP---ALGNFPSKDWAKILKEGILK  116 (464)
T ss_pred             cceEEEecccCEEEeCCCCEEEEccCCHhhhcCCCCCHHHHHHHHHHHHHHhhcccc---cCCcHHHHHHHHHHHHhHHh
Confidence            78999999999999999999999999999999999999999999985  33433322   2345677889999855    


Q ss_pred             hcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCC-------------------CC--ccEEEEEecCCcccceeeeec
Q 010250          156 MFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR-------------------PN--KKKFIARQKSYHGSTLIAASL  214 (514)
Q Consensus       156 ~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~-------------------~~--~~~ii~~~~~yHG~t~~~~~~  214 (514)
                      .+ +.++++|+|+|||+||||+|||+|+.|+...++                   ++  |.+||.|.++|||+|.+++++
T Consensus       117 ~~-p~~~~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~  195 (464)
T TIGR00699       117 VA-PKGQDQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLST  195 (464)
T ss_pred             hC-CCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHh
Confidence            44 346789999999999999999999988653321                   12  348999999999999999999


Q ss_pred             CCCccccCCCCCCCCcccccCCCCcccCCCCC--CChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChh
Q 010250          215 SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPG--ETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPAT  292 (514)
Q Consensus       215 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~  292 (514)
                      ++.+.++.. +.+.+.+.++++|. ++++...  ...+.+..++++++++++.+ .++++||||+||+++++|+++|+++
T Consensus       196 t~~~~~~~~-~~~~~~~~~~p~p~-~~~~~~~~~~~~~~~~~~~l~~l~~~l~~-~~~~iAAvI~EPv~g~~G~~~~~~~  272 (464)
T TIGR00699       196 TRSKPIHKL-DIPAFDWPQAPFPS-LKYPLEEHVKENAKEEQRCLEEVEDLIKK-WHKPVAAIIVEPIQSEGGDNHASPD  272 (464)
T ss_pred             cCCcccccc-CCCCCCceecCCCC-cccccccccccchhHHHHHHHHHHHHHHh-cCCcEEEEEEeCCCCCCCCcCCCHH
Confidence            887544433 33334445666664 3332211  11133455678888888864 3467999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC--Cchhchhhhhc-CCcccceeEEeCHHHHHHhhhccCCC
Q 010250          293 YFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK--PDLVSFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTL  369 (514)
Q Consensus       293 ~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~--pDiv~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~  369 (514)
                      ||++|+++|++||++||+|||||||||+|.+|+++++|+.  ||++|+||+|+ || +++    .+ +.   +..    .
T Consensus       273 yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~gK~lg~gG-~~~----~~-~~---~~~----~  339 (464)
T TIGR00699       273 FFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKFQTAG-YFF----HD-PA---FRP----N  339 (464)
T ss_pred             HHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEehhhhccCC-ccc----cc-hh---ccC----C
Confidence            9999999999999999999999999999999999999997  99999999996 55 332    22 22   211    1


Q ss_pred             CcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCC-ceeEEE--eeeeeEEEEEccCCCCC
Q 010250          370 GSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIR--GTGLILGTEFADNKSPN  445 (514)
Q Consensus       370 ~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~--g~g~~~~i~~~~~~~~~  445 (514)
                      ..+.|++||++||++|++++++|++++++++.+++++++++|+++|+++ .++| .+.++|  |.|+|+++++.+..   
T Consensus       340 ~~~~~~~T~~gnp~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~---  416 (464)
T TIGR00699       340 KPYRQFNTWMGDPSRALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEA---  416 (464)
T ss_pred             CCcccccCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHH---
Confidence            2346889999999999999999999999999999999999999999998 5688 788999  99999999985321   


Q ss_pred             CCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          446 EPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       446 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                              ....+.+.|+++|+++.+.| +.|||.||+++|++|||+++++|++++
T Consensus       417 --------~~~~i~~~~~~~Gvl~~~~g~~~ir~~Ppl~it~~eid~~~~~l~~~~  464 (464)
T TIGR00699       417 --------KRDKLLKKARNNGVNIGGCGVKAIRLRPMLVFQKHHADIFLEIISKII  464 (464)
T ss_pred             --------HHHHHHHHHHHCCcEEecCCCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence                    25668899999999998876 689999999999999999999998864

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK08297 L-lysine aminotransferase; Provisional

Probab=100.00  E-value=9.3e-68  Score=550.08  Aligned_cols=400  Identities=24%  Similarity=0.356  Sum_probs=322.2

Q ss_pred             CeEEEeeeCcEEEeC-CCCEEEEccCCcccccCCCCCHHHHH--HHHHHHhcCCccc-cccccCCchHHHHHHHHHHhcC
Q 010250           83 PLVIEKSEGSYVYDV-NGKKYLDSLAGLWCTALGGSEPRLVA--AATAQLNTLPFYH-SFWNRTTKPSLDLAKELLEMFT  158 (514)
Q Consensus        83 p~~~~~~~G~~~~d~-dG~~ylD~~s~~~~~~lGh~~p~v~~--A~~~~l~~~~~~~-~~~~~~~~~~~ela~~L~~~~~  158 (514)
                      ++++.+++|+|+||+ |||+||||.+|+|+++|||+||+|.+  |+.+|++++.+.+ .....+++...+++++|+++..
T Consensus        27 ~~~i~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~  106 (443)
T PRK08297         27 VLDLERSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG  106 (443)
T ss_pred             ceEEEeccCCEEEECCCCCEeeecccCHhhhcCCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC
Confidence            344899999999996 99999999999999999999999999  9999998765321 1123467788999999999873


Q ss_pred             cCCCCeEEEeCChhHHHHHHHHHHHHHHhh----cCC--CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCccc
Q 010250          159 ASKMAKVFFTNSGSEANDTQVKLVWYYNNA----LGR--PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVL  232 (514)
Q Consensus       159 ~~~~~~v~~~~sGseA~~~Alk~a~~~~~~----~~~--~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~  232 (514)
                      +.++++|+|+|||+||||.|+|+||.|+..    +++  ++|.+||.+.++|||+|.+++++++.+.....+... ....
T Consensus       107 p~~~~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~-~~~~  185 (443)
T PRK08297        107 DPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPK-FDWP  185 (443)
T ss_pred             CCCCCEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCC-CCcc
Confidence            446789999999999999999999998632    343  357899999999999999999998754333222111 1111


Q ss_pred             ccCCCCcccCCCCCCC---hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEE
Q 010250          233 HTDCPHYWRYAHPGET---EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI  309 (514)
Q Consensus       233 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI  309 (514)
                      +++.|.. +++++..+   .+.+..++++++++++.+ .++++++||+||+|+++|+++||++||++|+++|++||++||
T Consensus       186 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI  263 (443)
T PRK08297        186 RIDNPKL-RFPLPGEDLEEVEALEAEALAQARAAFER-HPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLI  263 (443)
T ss_pred             ccCCCCC-CCCCcccccchhhHHHHHHHHHHHHHHHh-CCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence            2322221 11222221   234555667888888864 457899999999999999999999999999999999999999


Q ss_pred             EechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHH
Q 010250          310 ADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAI  389 (514)
Q Consensus       310 ~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~  389 (514)
                      +|||||||||+|++|+++++++.||++|+||++     |+|++++++++.+.......  ....|++||++||++|++++
T Consensus       264 ~DEV~tGfGRtG~~~a~~~~gv~PDiv~~gK~l-----~~~a~l~~~~i~~~~~~~~~--~~~~~~~T~~gnpl~~aaa~  336 (443)
T PRK08297        264 FDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKKT-----QVCGIMAGRRVDEVEDNVFA--VSSRINSTWGGNLVDMVRAR  336 (443)
T ss_pred             EechhhccCccchHHHHHhcCCCCCEEEecccc-----cccceecchHHHHhhhhhcc--CccccCCCCCccHHHHHHHH
Confidence            999999999999999999999999999999997     35667777765543321000  12248899999999999999


Q ss_pred             HHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCcee-EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250          390 EALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIG-EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM  467 (514)
Q Consensus       390 aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~-~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv  467 (514)
                      ++|++++++++.+++++++++|+++|+++ .+++.+. +++|.|+|++++|.+..           ....+...|+++|+
T Consensus       337 a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~~~-----------~~~~~~~~l~~~Gv  405 (443)
T PRK08297        337 RILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPTTA-----------DRDEVIRRLWEEGV  405 (443)
T ss_pred             HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecCHH-----------HHHHHHHHHHHCCE
Confidence            99999999999999999999999999998 5677655 99999999999996421           24568889999999


Q ss_pred             EEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          468 LVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       468 ~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ++.+.+ +.+||+||+++|++|||+++++|+++++++
T Consensus       406 l~~~~~~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~  442 (443)
T PRK08297        406 LVLPCGERSIRFRPALTVTTEEIDAAIDALRRALPEV  442 (443)
T ss_pred             EEecCCCCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence            998866 579999999999999999999999998764

>PRK06148 hypothetical protein; Provisional

Probab=100.00  E-value=1.1e-67  Score=595.70  Aligned_cols=399  Identities=27%  Similarity=0.471  Sum_probs=336.6

Q ss_pred             CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250           81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS  160 (514)
Q Consensus        81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~  160 (514)
                      ..|+++++|+|+|+||+|||+||||.+++  .+|||+||+|++|+.+|++++...+   ...++...+++++|++.++ .
T Consensus       605 ~~p~~i~~g~G~~l~D~dG~~ylD~~~g~--~~lGH~hp~v~~Ai~~q~~~l~~~~---~~~~~~~~~lAe~L~~~~p-~  678 (1013)
T PRK06148        605 SDPIKFVRGWGVWLIDNRGRAYLDCFNNV--CHVGHAHPRVVAAAARQAARLNTNT---RYLHDAIVAYAERLTATLP-D  678 (1013)
T ss_pred             CCCceEEEeeecEEEECCCCEEEEcccCh--hhcCCCCHHHHHHHHHHHhhcCCcC---CcCCHHHHHHHHHHHHhCC-C
Confidence            37899999999999999999999999984  7899999999999999999864322   2357888999999999874 3


Q ss_pred             CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC-CCcccccCCCCc
Q 010250          161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP-APFVLHTDCPHY  239 (514)
Q Consensus       161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~-~~~~~~~~~~~~  239 (514)
                      ++++|+|+|||+||||.|||+||.|      ++|++||+++++|||+|.+++++++.. ++..+... .+.+..++.|+.
T Consensus       679 ~~~~v~f~nSGsEA~e~AlklAr~~------tGr~~ii~~~~~YHG~t~~a~s~s~~~-~~~~~~~~~~~~~~~~~~p~~  751 (1013)
T PRK06148        679 GLTVAFFVNSGSEANSLALRLARAH------TGQRDAIVLDHAYHGTTTELIDLSPYK-FNRKGGKGRPDHVEVAEVPDS  751 (1013)
T ss_pred             CcCEEEEeCCcHHHHHHHHHHHHHh------cCCCeEEEEcCCccCCCcchhhcCchh-hcccCCCCCCCCceEcCCCCc
Confidence            5789999999999999999999988      678899999999999999999988733 33333322 234445566666


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHH--hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF  317 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~--~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~  317 (514)
                      ++.++...+ .++.....+++++++..  ..++++|+||+||+||++|+++||++||++|+++|++||+++|+|||||||
T Consensus       752 ~~~~~~~~~-~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGf  830 (1013)
T PRK06148        752 YRGPERWPD-AEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGF  830 (1013)
T ss_pred             cccCCCCCh-hhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCC
Confidence            665443211 22333445667776643  234689999999999999999999999999999999999999999999999


Q ss_pred             ccccc-cceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh
Q 010250          318 GRLGT-MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK  396 (514)
Q Consensus       318 gr~G~-~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~  396 (514)
                      ||+|+ +|+++++|+.|||+|+||+|+|| +|+|++++++++++.+..     + ..|++||++||++|++++++|++++
T Consensus       831 GRtG~~~~a~e~~gv~PDivt~gK~lggG-~Plgav~~~~ei~~~~~~-----g-~~~~~Tf~gnpla~aaa~a~L~~i~  903 (1013)
T PRK06148        831 GRVGSHWWAFETQGVVPDIVTMGKPIGNG-HPMGAVVTTREIADSFDN-----G-MEYFNTFGGNPVSCAIGLAVLDIIE  903 (1013)
T ss_pred             CCCCCcchhhhhcCCCcceeeecccccCC-cceEEEEEcHHHHhhccC-----C-CccccCCCCCHHHHHHHHHHHHHHh
Confidence            99997 89999999999999999999999 799999999999998863     1 2467999999999999999999999


Q ss_pred             hccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--
Q 010250          397 ERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--  473 (514)
Q Consensus       397 ~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--  473 (514)
                      ++++.+++++++++|+++|+++ .+++++.+|+|.|+|++++|..+..+..+   .......+...|+++||++.+.|  
T Consensus       904 ~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~---~~~~~~~i~~~~~~~Gvl~~~~g~~  980 (1013)
T PRK06148        904 DEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAP---ATAIARYVKNGARERGILIGTEGPH  980 (1013)
T ss_pred             hccHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCc---cHHHHHHHHHHHHhCCeEEeccCCC
Confidence            9999999999999999999998 67899999999999999999754332221   12245678899999999998654  


Q ss_pred             -CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          474 -DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       474 -~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                       +.|||.||+++|++|||+++++|++++.++
T Consensus       981 ~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148        981 DNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred             CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence             789999999999999999999999999764

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=2.7e-67  Score=546.60  Aligned_cols=403  Identities=28%  Similarity=0.497  Sum_probs=339.9

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+.. ...++...+|+++|++.++ .+
T Consensus        23 ~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~la~~L~~~~p-~~  100 (443)
T PRK08360         23 YPLVPVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPI-YGFPVEPLLLAEKLIEIAP-GD  100 (443)
T ss_pred             CCceEEecceeEEEECCCCEEEEccccHhhcccCCCCHHHHHHHHHHHHhccCcccc-ccCcHHHHHHHHHHHHhCC-CC
Confidence            688999999999999999999999999999999999999999999999987655432 2346778999999999874 34


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCcc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      .++|+|+|||+||||+|||+||.|      ++|.+|+.+.++|||++.+++++++.. .++..+++ .+.+.++++|+..
T Consensus       101 ~~~v~f~~sGsEAve~AlklAr~~------tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~  173 (443)
T PRK08360        101 NPKVSFGLSGSDANDGAIKFARAY------TKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGE-LSDVHYIPYPDCY  173 (443)
T ss_pred             CCEEEEcCCHHHHHHHHHHHHHHh------cCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCC-CCCcEEEeCCccc
Confidence            679999999999999999999988      578899999999999999998888743 34444554 3455666777665


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHh-CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~~-~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                      +..... ....+..++.+.+++++... .++++++||+||+||++|++.|+++||++|+++|++||+++|+||||+||||
T Consensus       174 ~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr  252 (443)
T PRK08360        174 RCPFGK-EPGSCKMECVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGR  252 (443)
T ss_pred             cccccC-chhhhHHHHHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence            543211 11233334566677777542 3468999999999999999999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|++++++++++.||++++||++++| +|+|++++++++++.+..       ..+++|++++|++|++++++|+.+++++
T Consensus       253 ~G~~~a~~~~~~~pDiitlsK~l~~G-~pigav~~~~~i~~~~~~-------~~~~~T~~~~p~~~aaa~a~l~~l~~~~  324 (443)
T PRK08360        253 TGKWFAIEHFGVEPDIITLGKPLGGG-LPISATIGRAEIMDSLPP-------LAHAFTLSGNPVASAAALAVIEEIEEKN  324 (443)
T ss_pred             CccchhhhhcCCCCCEEEecccccCC-ceeEEEEEcHHHHhhhcC-------CCCCCCCCcCHHHHHHHHHHHHHHHHcC
Confidence            99988888899999999999999988 899999999999998852       3477899999999999999999998889


Q ss_pred             HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEE
Q 010250          400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIM  477 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iR  477 (514)
                      +.+++++++++|++.|+++ .+++++.+++|.|+|++++|.++.....+   ....+..+...|+++|+++.+. ++.+|
T Consensus       325 l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~---~~~~~~~~~~~l~~~Gi~~~~~~~~~lr  401 (443)
T PRK08360        325 LLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKER---AYEEAAKVVWRAWELGLIVTFFSGNVLR  401 (443)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCc---cHHHHHHHHHHHHHCCeEEeecCCCEEE
Confidence            9999999999999999988 56788999999999999999754322111   1123456888999999998764 57899


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      |+||+++|++||++++++|++++..+.+
T Consensus       402 ~~P~l~~t~~~id~~~~~l~~~l~~~~~  429 (443)
T PRK08360        402 IQPPLTIEKEVLDEGLDILEEAIEDVEE  429 (443)
T ss_pred             EeCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999987653

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=100.00  E-value=2.2e-67  Score=545.66  Aligned_cols=393  Identities=25%  Similarity=0.425  Sum_probs=332.6

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||+|||+||||.+++|+++|||+||+|.+|+.+|++++.+... ...+++...+++++|++.++..+
T Consensus        22 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~-~~~~~~~~~~la~~l~~~~p~~~  100 (421)
T PRK06777         22 CDFYAERAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAY-QIVPYASYVTLAERINALAPIDG  100 (421)
T ss_pred             CCeeEEeeecCEEEeCCCCEEEEcccCHHhhccCCCCHHHHHHHHHHHhhcccccc-cccCChHHHHHHHHHHHhCCCCC
Confidence            47899999999999999999999999999999999999999999999998754322 12356788999999999875445


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCcc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      .++++|++||+||||.|+|+||.|      ++|.+||.++++|||++.+++++++.. .++..+.+..+.+.++++|+..
T Consensus       101 ~~~~~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~  174 (421)
T PRK06777        101 PAKTAFFTTGAEAVENAVKIARAY------TGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNEL  174 (421)
T ss_pred             CceEEEeCCcHHHHHHHHHHHHHh------hCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc
Confidence            789999999999999999999987      567899999999999999999988753 3455555444445556666432


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHH-hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILK-EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~-~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                      +.    ..    ...+++++++++.+ ..++++++||+||+|+++|+.+++++||++|+++|++||++||+||||+||||
T Consensus       175 ~~----~~----~~~~~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr  246 (421)
T PRK06777        175 HG----VS----VEEALSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFAR  246 (421)
T ss_pred             cC----cC----HHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCcc
Confidence            21    01    12345678887754 24578999999999999999999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|++|+++++++.||++++||++++| +|+|++++++++++.+..       ..+++||++||++|++++++|+.+++++
T Consensus       247 ~g~~~~~~~~~~~pDiv~~sK~l~~G-~pigav~~~~~i~~~~~~-------~~~~~T~~~~p~~~aaa~a~L~~~~~~~  318 (421)
T PRK06777        247 TGKLFAMEYYDVKPDLITMAKSLGGG-MPISAVVGRAEVMDAPAP-------GGLGGTYAGNPLAVAAALAVLDVIAEEK  318 (421)
T ss_pred             CCchhhhhhcCCCCCEEeeehhhcCC-CceEEEEEcHHHHhccCC-------CCCCCCCCcCHHHHHHHHHHHHHHHhcc
Confidence            99998999999999999999999988 899999999999988863       2567899999999999999999998889


Q ss_pred             HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CE
Q 010250          400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DN  475 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~  475 (514)
                      +.+++++++++|+++|+++ .+++.+.+++|.|+|+++++..... ..   .....+..+...|+++||++.+.+   +.
T Consensus       319 l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~-~~---~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~  394 (421)
T PRK06777        319 LCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFNDPQT-GK---PSPEFTRQYQRQALEEGLLLLSCGVHGNV  394 (421)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCeEEecCceEEEEEEEecCcc-CC---ccHHHHHHHHHHHHhCCeEEeecCCCCCE
Confidence            9999999999999999998 5678899999999999999865321 11   112346667788899999998764   68


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      +||.||+++|+++|++++++|++++.
T Consensus       395 lr~~ppl~i~~~~i~~~~~~l~~~l~  420 (421)
T PRK06777        395 IRFLYPLTIPDAQFSKALNILTRLLA  420 (421)
T ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence            99999999999999999999998874

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=100.00  E-value=4.9e-67  Score=548.22  Aligned_cols=405  Identities=27%  Similarity=0.487  Sum_probs=339.8

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||+|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.... ...++...+++++|+++++...
T Consensus        36 ~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~-~~~~~~~~~la~~L~~~~p~~~  114 (451)
T PRK06918         36 IPTFAQSANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFN-VMMYEPYIELAEKLAALAPGSF  114 (451)
T ss_pred             CCceEEeccccEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHHhccCcccc-ccccHHHHHHHHHHHHhCCCCC
Confidence            578999999999999999999999999999999999999999999999987544221 2356888999999999985322


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccccCCCCCCCCcccccCCCCcc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      .++|+|+|||+||||+|||+||.|      ++|.+||.++++|||++.+++++++. +.++..|++..+.+.++++|+.+
T Consensus       115 ~~~v~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (451)
T PRK06918        115 DKKVLFLNSGAEAVENAVKIARKY------TKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEY  188 (451)
T ss_pred             CCEEEEcCCcHHHHHHHHHHHHHH------hCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccc
Confidence            269999999999999999999988      56889999999999999999988875 34555566555666677777666


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHH-hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILK-EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~-~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                      +.+. +...+.+...+.+.+++++.. ..++++|+||+||+|+++|.++|+++|+++|+++|++||+++|+||||+||||
T Consensus       189 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr  267 (451)
T PRK06918        189 RRPE-GLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFAR  267 (451)
T ss_pred             cccc-cCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCc
Confidence            5432 122233444445666666532 24578999999999999999999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|++++++++++.||+++|||++++| +|+|++++++++++.+..       ..+++|+++||++|+++.++|+++++++
T Consensus       268 ~g~~~a~~~~~v~pDi~t~sK~l~~G-~pig~v~~~~~i~~~~~~-------~~~~~T~~g~~l~~aaa~a~l~~i~~~~  339 (451)
T PRK06918        268 TGKYFAIEHFDVVPDLITVSKSLGAG-VPISGVIGRKEIMDESAP-------GELGGTYAGSPLGCAAALAVLDIIEKEN  339 (451)
T ss_pred             cCceehhHhcCCCCCEEeeehhhcCC-CccEEEEEcHHHHhccCC-------CCcCcCCCcCHHHHHHHHHHHHHHHHCC
Confidence            99988889999999999999999988 899999999999988752       2578899999999999999999998889


Q ss_pred             HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CE
Q 010250          400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DN  475 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~  475 (514)
                      +.+++++++++++++|+++ .+++.+.+++|.|+++.+++..+.....  + .......+...|+++||++.+.+   +.
T Consensus       340 ~~~~~~~~g~~l~~~l~~l~~~~~~~~~vrg~G~~~~~~~~~~~~~~~--~-~~~~~~~l~~~~~~~Gvlv~~~~~~~~~  416 (451)
T PRK06918        340 LNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKE--P-DKTLTANICKEANKRGLLLLSAGTYGNV  416 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCceeeccceeEEEEEEccCCCcCC--C-cHHHHHHHHHHHHHCCeEEeecCCCCCE
Confidence            9999999999999999998 4678888999999999999863221111  1 11245678888999999998864   78


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      +||+||+++|+++|++++++|+++++++.+
T Consensus       417 lrl~p~l~~t~~~id~~l~~l~~~l~~~~~  446 (451)
T PRK06918        417 IRVLMPLVITDEQLEEGLTIIEESLQACYE  446 (451)
T ss_pred             EEEECCCccCHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999987644

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=100.00  E-value=1.4e-67  Score=548.18  Aligned_cols=387  Identities=25%  Similarity=0.444  Sum_probs=328.8

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-AS  160 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~  160 (514)
                      .|+++++|+|+|+||.|||+||||.+|+|+++|||+||+|.+|+++|+++..+.+.. ...++...+|+++|++.+. +.
T Consensus        21 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~-~~~~~~~~~lae~l~~~~~~~~   99 (425)
T PRK09264         21 FPVVFDKAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGL-DMHTTAKREFLETFEETILKPR   99 (425)
T ss_pred             CCccEEeeecCEEEeCCCCEeeecccchhhccCCCCCHHHHHHHHHHHHhccccccc-ccCcHHHHHHHHHHHHhhcCCc
Confidence            678999999999999999999999999999999999999999999999875544332 2356778899999999752 22


Q ss_pred             CCC-eEEE-eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC
Q 010250          161 KMA-KVFF-TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH  238 (514)
Q Consensus       161 ~~~-~v~~-~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  238 (514)
                      +.+ +++| +|||+||||.|+|+||.|      ++|.+||+++++|||+|.+++++++.+.++..++++.+.+.++++|+
T Consensus       100 ~~~~~~~f~~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~  173 (425)
T PRK09264        100 GLDYKVQFTGPTGTNAVEAALKLARKV------TGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDG  173 (425)
T ss_pred             CCCceEEEeCCCHHHHHHHHHHHHHHh------cCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCC
Confidence            344 6767 489999999999999988      57889999999999999999999988777777776666667777765


Q ss_pred             cccCCCCCCChhHHHHHHHHHHHHHHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC
Q 010250          239 YWRYAHPGETEEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA  316 (514)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG  316 (514)
                      +++.          ..++++++++++.+..  ++++++||+||+|+++|+++|+++||++|+++|++||++||+||||||
T Consensus       174 ~~~~----------~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG  243 (425)
T PRK09264        174 YFGG----------DVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAG  243 (425)
T ss_pred             cccc----------chhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhC
Confidence            4321          1234677888886532  357999999999999999999999999999999999999999999999


Q ss_pred             cccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHH-HHH
Q 010250          317 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEAL-KIY  395 (514)
Q Consensus       317 ~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal-~~~  395 (514)
                      |||+|++|+++++++.||++|+||+|++|++|+|++++++++. .+.       ...+++||++||++|+++++++ +++
T Consensus       244 ~GrtG~~~~~~~~~v~PDi~t~~K~l~~~G~pigav~~~~~i~-~~~-------~~~~~~T~~gnp~~~aaa~a~l~~~~  315 (425)
T PRK09264        244 CGRTGTFFSFERAGITPDIVTLSKSISGYGLPMALVLIKPELD-VWK-------PGEHNGTFRGNNLAFVTATAALEEYW  315 (425)
T ss_pred             CccccHHHHHhhcCCCCCEEEeccccCCCccceEEEEEchhhh-ccC-------CCccCCCCCCCHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999338999999998873 332       2357789999999999999999 666


Q ss_pred             hhccHHHHHHHHHHHHHhhhhhc-cCCCc-eeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC
Q 010250          396 KERNIVEQVNKIAPKFQDGVKAF-SDSPI-IGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG  473 (514)
Q Consensus       396 ~~~~~~~~~~~~~~~l~~~L~~l-~~~~~-~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g  473 (514)
                      +++++.+++++++++|+++|+++ .+++. +.+++|.|+++++++.+..           ....+...|+++|+++.+.+
T Consensus       316 ~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~i~l~~~~-----------~~~~l~~~~~~~Gv~~~~~~  384 (425)
T PRK09264        316 SDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDFGDGE-----------LAGKIAAEAFENGLIIETSG  384 (425)
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHHHhCCCceecceecccEEEEEecChH-----------HHHHHHHHHHHCCCEEeccC
Confidence            77789999999999999999987 45664 4789999999999996421           35568899999999998754


Q ss_pred             ---CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          474 ---DNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       474 ---~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                         +.|||+||+++|++||++++++|+++++++.
T Consensus       385 ~~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~  418 (425)
T PRK09264        385 PEDEVVKLLPPLTIDEEELEEGLDILEEAVAEVL  418 (425)
T ss_pred             CCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence               6799999999999999999999999998763

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=100.00  E-value=1.4e-67  Score=545.81  Aligned_cols=383  Identities=25%  Similarity=0.443  Sum_probs=326.2

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-AS  160 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~  160 (514)
                      .|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+++|+++..+.+.. ...++...+++++|++.+. +.
T Consensus        17 ~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~~-~~~~~~~~~lae~l~~~~~~~~   95 (412)
T TIGR02407        17 FPTVFEKAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLADDGIIHSL-DMATEAKREFLETFNEIILKPR   95 (412)
T ss_pred             CCceEEecccCEEEeCCCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhccceecc-ccCcHHHHHHHHHHHHhccCcc
Confidence            678999999999999999999999999999999999999999999999875544332 2346788999999999752 22


Q ss_pred             CC-CeEEE-eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC
Q 010250          161 KM-AKVFF-TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH  238 (514)
Q Consensus       161 ~~-~~v~~-~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  238 (514)
                      +. ++++| +|||+||||.|+|+||.|      ++|++||.++++|||+|.+++++++.+.++..++++.+.+..+++|+
T Consensus        96 ~~~~~~~f~~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~  169 (412)
T TIGR02407        96 GLDYKVQFPGPTGTNAVESALKLARKV------TGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDG  169 (412)
T ss_pred             CCCceEEEeCCCchHHHHHHHHHHhhh------cCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCC
Confidence            23 35766 599999999999999987      56889999999999999999999988777777776666666666654


Q ss_pred             cccCCCCCCChhHHHHHHHHHHHHHHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC
Q 010250          239 YWRYAHPGETEEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA  316 (514)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG  316 (514)
                      +.+.          ..++++.+++++.+..  .+++++||+||+|+++|+++||++||++|+++|++||++||+||||||
T Consensus       170 ~~~~----------~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG  239 (412)
T TIGR02407       170 YLGG----------DVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAG  239 (412)
T ss_pred             cccc----------chhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhC
Confidence            3210          1234667888876432  257999999999999999999999999999999999999999999999


Q ss_pred             cccccccceecccCCCCchhchhhhhcC-CcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH-
Q 010250          317 FGRLGTMFGCDKYSIKPDLVSFAKALSS-AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI-  394 (514)
Q Consensus       317 ~gr~G~~~~~~~~gv~pDiv~~sK~l~g-G~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~-  394 (514)
                      |||+|++|+++++++.||++++||+|+| | +|+|++++++++ +.+.       ...+++||++||++|+++.++|++ 
T Consensus       240 ~GRtG~~~a~~~~~v~PDi~~~~K~lg~~G-~pigav~~~~~~-~~~~-------~~~~~~T~~gnpl~~aaa~a~l~~~  310 (412)
T TIGR02407       240 CGRTGTFFSFEPAGIEPDIVCLSKSISGYG-LPLALTLIKPEL-DVWK-------PGEHNGTFRGNNLAFVTATAALEYY  310 (412)
T ss_pred             CCccchhHHhcccCCCCCEEEechhccCCc-cceeEEEEchhh-hccC-------CCccCCCCCccHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999 6 899999999886 5443       236789999999999999999995 


Q ss_pred             HhhccHHHHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee
Q 010250          395 YKERNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS  472 (514)
Q Consensus       395 ~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~  472 (514)
                      ++++++.+++++++++++++|+.+ ..++ .+.+++|.|+++++++.+..           ....+...|+++||++.+.
T Consensus       311 i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~~~~-----------~~~~~~~~~~~~Gv~v~~~  379 (412)
T TIGR02407       311 WSDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGDGD-----------LAGKIAKAAFENGLIIETS  379 (412)
T ss_pred             hcccHHHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEecChH-----------HHHHHHHHHHHCCCEEecc
Confidence            777789999999999999999987 4566 67899999999999996431           2556888999999999764


Q ss_pred             C---CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          473 G---DNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       473 g---~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      +   +.|||+||+++|++|+++++++|+++++
T Consensus       380 ~~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~  411 (412)
T TIGR02407       380 GPNDEVIKLLPPLTIDEETLQQGLDILEQAVE  411 (412)
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence            3   6799999999999999999999999885

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=100.00  E-value=1.1e-67  Score=522.92  Aligned_cols=419  Identities=25%  Similarity=0.343  Sum_probs=344.1

Q ss_pred             cccccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhc
Q 010250           52 SSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNT  131 (514)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~  131 (514)
                      .++...+..++..+...++|+++.|... ..|+++.+++|+|+||+|||+||||+.+|+...|||+||.|++|+.+|+++
T Consensus         6 ~S~~l~~~A~~~~pGGvnspvra~~~v~-~~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~   84 (432)
T COG0001           6 KSEALFERAKKVIPGGVNSPVRAFKSVG-GYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLER   84 (432)
T ss_pred             chHHHHHHHhhhCCCCCCccccccCCCC-CCCeeEEeccCCeEEeCCCCEeeehhccCcccccCCCCHHHHHHHHHHHHh
Confidence            4455566678888999999999988764 699999999999999999999999999999999999999999999999998


Q ss_pred             CCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee
Q 010250          132 LPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA  211 (514)
Q Consensus       132 ~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~  211 (514)
                      +..+    +.+++...++++.|++.++  ..++|.|+||||||++.|||+||.|      ++|++||.|+++|||+....
T Consensus        85 G~~f----g~Pte~Ei~~Aell~~~~p--~~e~vrfvnSGTEAtmsAiRlARa~------TgR~kIikF~G~YHG~~D~~  152 (432)
T COG0001          85 GLSF----GAPTELEVELAELLIERVP--SIEKVRFVNSGTEATMSAIRLARAY------TGRDKIIKFEGCYHGHSDSL  152 (432)
T ss_pred             cCCC----CCCCHHHHHHHHHHHHhcC--cccEEEEecchhHHHHHHHHHHHHh------hCCCeEEEEcCCCCCCccHH
Confidence            7433    6688999999999999985  4589999999999999999999988      78999999999999997666


Q ss_pred             eecCCCccccCCCC-CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCC
Q 010250          212 ASLSGLPALHQKFD-LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPP  290 (514)
Q Consensus       212 ~~~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~  290 (514)
                      +.-.++..-  .++ +..+.++.-..          .+.-.+..||++.+++++++. ++++|+||+||++++.|+++|.
T Consensus       153 lv~agsg~~--t~g~p~s~Gvp~~~a----------~~ti~~~yND~~al~~~~~~~-g~~IAaVIvEPv~gn~g~i~p~  219 (432)
T COG0001         153 LVKAGSGAA--TLGSPSSPGVPADVA----------KHTLVLPYNDLEALEEAFEEY-GDDIAAVIVEPVAGNMGVVPPE  219 (432)
T ss_pred             HhhcCcCcc--cCCCCCCCCCChhhh----------ccEEEecCCCHHHHHHHHHHc-CCcEEEEEeccccCCCCCCCCC
Confidence            543332110  111 11111110000          000012234567788887654 4689999999999999999999


Q ss_pred             hhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCC
Q 010250          291 ATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG  370 (514)
Q Consensus       291 ~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~  370 (514)
                      ++||++|++||++||++||+|||+||| |.+..+++++|||+||+.||||.++|| +|+|++.+++++|+.+.+.    +
T Consensus       220 ~~Fl~~Lr~lt~e~G~lLI~DEViTGF-R~~~gGaq~~~gi~PDlttlGKiIGGG-lP~ga~gGr~eiM~~~~p~----g  293 (432)
T COG0001         220 PGFLEGLRELTEEHGALLIFDEVITGF-RVALGGAQGYYGVEPDLTTLGKIIGGG-LPIGAFGGRAEIMEQLAPL----G  293 (432)
T ss_pred             HHHHHHHHHHHHHcCcEEEEecchhhc-ccCCcccccccCcCcchhhhhhhhcCC-cceeeeccHHHHHhhhCCC----C
Confidence            999999999999999999999999999 988889999999999999999999999 8999999999999988754    5


Q ss_pred             cccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCC-
Q 010250          371 SFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEP-  447 (514)
Q Consensus       371 ~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~-  447 (514)
                      ...+.+|+++||++++|++++|+.+.+ ++.++++.+++++|+++|++. .++.+...+.+.|.|+.+.|.+....... 
T Consensus       294 ~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~d  373 (432)
T COG0001         294 PVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYAD  373 (432)
T ss_pred             CccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeecceEEEEecCCCCCCHHH
Confidence            678899999999999999999999987 458999999999999999987 56777778999999999999875422110 


Q ss_pred             -CCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          448 -FPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       448 -~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                       ...+......+.+.|+++||++.|.. +..-++  ..+|+++|++.+++++++++++.
T Consensus       374 a~~sd~~~~~~~~~~~l~~GV~l~ps~~ea~flS--~ahte~di~~~~~a~~~~~~~~~  430 (432)
T COG0001         374 AKRSDVERFAKFFHHLLNRGVYLAPSQFEAGFLS--TAHTEEDIDRTLEAADEAFKELA  430 (432)
T ss_pred             HHhhchHHHHHHHHHHHhCCcccCCccccceeee--cccCHHHHHHHHHHHHHHHHHhh
Confidence             01111223445569999999999875 456677  67999999999999998887764

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=100.00  E-value=2.3e-67  Score=532.07  Aligned_cols=355  Identities=26%  Similarity=0.487  Sum_probs=309.1

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++.+++|+|+||.|||+||||.+++|++++||+||+|++|+.+|++++.+...  ...++...+++++|+++.   +
T Consensus         6 ~~~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~--~~~~~~~~~la~~l~~~~---~   80 (364)
T PRK04013          6 KRLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLVVAGP--MFEHEEKEEMLEELSKWV---N   80 (364)
T ss_pred             CCccEEEeecCEEEECCCCEEEEcccChhhccCCCCCHHHHHHHHHHHHhcCCccC--CcCCHHHHHHHHHHHhhc---C
Confidence            67889999999999999999999999999999999999999999999998765433  235788899999999986   4


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      .++++|+|||+||++.|+|+|+.|      ++|++||+++++|||++.+++++++.+.++..+.+..+.+.++++++   
T Consensus        81 ~~~v~~~~SGseA~e~Alklar~~------~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d---  151 (364)
T PRK04013         81 YEYVYMGNSGTEAVEAALKFARLY------TGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFND---  151 (364)
T ss_pred             CCEEEEeCchHHHHHHHHHHHHHH------hCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCC---
Confidence            679999999999999999999987      56789999999999999999999988777766665444444433321   


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                                     .+.+++.+.    +++++||+||++|++|+++|+++||++|+++|++||++||+||||||| |+|
T Consensus       152 ---------------~~~l~~~i~----~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG  211 (364)
T PRK04013        152 ---------------VEAAKEAIT----KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTG  211 (364)
T ss_pred             ---------------HHHHHHHhc----CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCC
Confidence                           355666663    579999999999999999999999999999999999999999999999 999


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~  401 (514)
                      ++|+++++++.||++|+||+|+|| +|+|+++.++++    .       ...|++||++||++|++++++|++++++++.
T Consensus       212 ~~~a~~~~gv~PDiv~~gK~lggG-~P~~a~~~~~~~----~-------~~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~  279 (364)
T PRK04013        212 KFLAIEHYKVEPDIVTMGKGIGNG-VPVSLTLTNFDV----E-------RGKHGSTFGGNPLACKAVAVTLRILRRERLV  279 (364)
T ss_pred             chhHHHhcCCCCCEEEecccccCC-ceeEEEEecccc----c-------CCCcCCCCCcCHHHHHHHHHHHHHHHhccHH
Confidence            999999999999999999999999 899999998875    1       1258899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeC
Q 010250          402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSP  480 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p  480 (514)
                      +++++.       |+++. .+.+.++||.|+|++++|...             ...+...|+++|+++.+.+ +.|||.|
T Consensus       280 ~~~~~~-------l~~l~-~~~v~~vRG~Gl~~gve~~~~-------------~~~i~~~~~~~Gll~~~~g~~vlr~~P  338 (364)
T PRK04013        280 EKAGEK-------FIEIK-GERVVTTRGRGLMIGIVLKKP-------------VGKYVEELQNRGYLVHTAGQRVIRLLP  338 (364)
T ss_pred             HHHHHH-------HHHhc-cCcceeeeeCcEEEEEEeCCc-------------HHHHHHHHHhCCcEEeeCCCCEEEEeC
Confidence            998875       23332 267899999999999999531             2357789999999998876 7899999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHH
Q 010250          481 PFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       481 ~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      |+++|++|+++++++|+++++++
T Consensus       339 pl~it~~~i~~~~~~l~~~l~~~  361 (364)
T PRK04013        339 PLIISKDTMEEAKSAIEGVINDI  361 (364)
T ss_pred             CcccCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999764

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=100.00  E-value=1.4e-66  Score=539.73  Aligned_cols=410  Identities=30%  Similarity=0.518  Sum_probs=343.1

Q ss_pred             ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250           68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL  147 (514)
Q Consensus        68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~  147 (514)
                      .|+|+.....  ...++.+++++|+|+||.|||+||||.+++|+++|||+||+|++|+.+|++++.+... ...+++...
T Consensus        15 ~~~~~~~~~~--~~~~~~~~~a~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~-~~~~~~~~~   91 (427)
T TIGR00508        15 IWHPYTSMSS--PLPVYPVESADGVELTLDDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQIDKMSHVMF-GGFTHKPAI   91 (427)
T ss_pred             cccCccCccc--cCCCceEEeeeeeEEEeCCCCEEEEccchHHHhcCCCCCHHHHHHHHHHHHhcCCccc-cccCCHHHH
Confidence            4666655421  1124678999999999999999999999999999999999999999999998654322 123567889


Q ss_pred             HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCC
Q 010250          148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDL  226 (514)
Q Consensus       148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~  226 (514)
                      +++++|++.++ .++++|+|++||+||++.|+|+|+.|+..++.++|.+||+|+++|||.+.+++++++.. .++..+..
T Consensus        92 ~la~~l~~~~~-~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~  170 (427)
T TIGR00508        92 ELCQKLVKMTP-NALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKG  170 (427)
T ss_pred             HHHHHHHhhCC-CCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccc
Confidence            99999999874 46789999999999999999999999877777788999999999999999999887742 23333433


Q ss_pred             CCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhcC
Q 010250          227 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYD  305 (514)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~g  305 (514)
                      ..+....+++|.. ++      ...+.+.+++++++++.+. ++++++||+||+ +++||+++++++||++|+++|++||
T Consensus       171 ~~~~~~~~~~p~~-~~------~~~~~~~~~~~l~~~l~~~-~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~  242 (427)
T TIGR00508       171 YLPEQIFAPAPQN-RF------DEEWNEEAITPLAKLMELH-SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYD  242 (427)
T ss_pred             cCCCCeEcCCCCc-cc------cchhHHHHHHHHHHHHHhc-CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcC
Confidence            3333344444432 11      0224456678888888654 467999999998 9999999999999999999999999


Q ss_pred             CEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHH
Q 010250          306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC  385 (514)
Q Consensus       306 illI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~  385 (514)
                      ++||+||||+||||+|++|+++++++.||++++||+|+||++|++++++++++++.+....  .+.+.+++||++||++|
T Consensus       243 ~llI~DEv~tG~Gr~G~~~~~~~~~v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~--~~~~~~~~T~~g~p~~~  320 (427)
T TIGR00508       243 ILLIADEIATGFGRTGKLFACEHAGVVPDILCVGKALTGGYMTLSATVTTDKVAQTISSGE--AGCFMHGPTFMGNPLAC  320 (427)
T ss_pred             CEEEEeccccCCCcCCccchhhhcCCCCCEEEechhhhcCcccceEEEEcHHHHHHHhcCC--CCccccCCCCCcCHHHH
Confidence            9999999999999999999999999999999999999999889999999999999986421  12346889999999999


Q ss_pred             HHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250          386 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH  465 (514)
Q Consensus       386 aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  465 (514)
                      ++++++|++++++++.+++++++++|+++|+++..++.+.+++|.|+++++++.+..           ....+...|+++
T Consensus       321 aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~~-----------~~~~~~~~l~~~  389 (427)
T TIGR00508       321 AVAEASLAILLEGEWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKPV-----------NVEELQKKFVEQ  389 (427)
T ss_pred             HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCcc-----------CHHHHHHHHHHC
Confidence            999999999998899999999999999999998656777899999999999996421           134688899999


Q ss_pred             CcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          466 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       466 Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      ||++.+.++.+|++||+++|++|||+++++|++++.+
T Consensus       390 Gv~~~~~~~~l~~~ppl~~t~~~id~~~~~l~~~l~~  426 (427)
T TIGR00508       390 GVWIRPFGKLIYVMPPYIITTEQLQKLTAALIEALHE  426 (427)
T ss_pred             CeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence            9999988888999999999999999999999999853

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=100.00  E-value=4.5e-67  Score=543.38  Aligned_cols=393  Identities=26%  Similarity=0.409  Sum_probs=333.3

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+||||+|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+. ....+++..+++++|++.++..+
T Consensus        22 ~~~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~-~~~~~~~~~~la~~l~~~~p~~~  100 (421)
T PRK09792         22 CNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAY-QIVPYESYVTLAEKINALAPVSG  100 (421)
T ss_pred             CCeeEEeccccEEEeCCCCEEEEccCchhhhcCCCCCHHHHHHHHHHHHhccCccc-CccCCHHHHHHHHHHHHhCCCCC
Confidence            46899999999999999999999999999999999999999999999998754322 12367888999999999875345


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccccCCCCCCCCcccccCCCCcc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      .++++|++||+||||.|+|+||.|      ++|.+||.++++|||++.+++++++. +.++.++.+..+.+.++++|...
T Consensus       101 ~~~~~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~  174 (421)
T PRK09792        101 QAKTAFFTTGAEAVENAVKIARAH------TGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL  174 (421)
T ss_pred             CceEEEeCChHHHHHHHHHHHHHh------cCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc
Confidence            579999999999999999999987      56789999999999999999998875 33555555444445556665432


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHh-CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~~-~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                      +.        ....++++.+++++.+. .++++++||+||+|+++|++.++++|+++|+++|++||+++|+|||++||||
T Consensus       175 ~~--------~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr  246 (421)
T PRK09792        175 HG--------ISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFAR  246 (421)
T ss_pred             cc--------ccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCC
Confidence            21        01234567788887642 3468999999999999999999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|++++++++++.||++||||+|+|| +|+|++++++++++.+..       ..+++||++||++|++++++++++++++
T Consensus       247 ~G~~~a~~~~~~~pDi~t~gK~l~~G-~pigav~~~~~i~~~~~~-------~~~~~T~~gnpl~~aaa~a~l~~l~~~~  318 (421)
T PRK09792        247 TGKLFAMDHYADKPDLMTMAKSLAGG-MPLSGVVGNANIMDAPAP-------GGLGGTYAGNPLAVAAAHAVLNIIDKES  318 (421)
T ss_pred             CCchhHHHhcCCCCcEEEeehhhcCC-CceEEEEEcHHHHhccCC-------CCcCCCCCCCHHHHHHHHHHHHHHHhhh
Confidence            99999999999999999999999998 899999999999988752       2578899999999999999999999889


Q ss_pred             HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CCE
Q 010250          400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDN  475 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~  475 (514)
                      +.++++++++++++.|+++ .++|.+..++|.|++++++|.+... ..+   .......+...|+++|+++.+.   ++.
T Consensus       319 ~~~~~~~~g~~l~~~l~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~-~~~---~~~~~~~l~~~~~~~Gv~i~~~g~~~~~  394 (421)
T PRK09792        319 LCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQT-GEP---SAAIAQKIQQRALAQGLLLLTCGAYGNV  394 (421)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCcceecccceEEEEEecCCcc-CCc---chHHHHHHHHHHHHCCcEEeecCCCCCE
Confidence            9999999999999999998 5688889999999999999975321 111   1123567889999999999753   378


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      |||.||+++|++||++++++|++++.
T Consensus       395 irl~P~l~i~~~ei~~~~~~l~~~l~  420 (421)
T PRK09792        395 IRFLYPLTIPDAQFDAAMKILQDALS  420 (421)
T ss_pred             EEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999874

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=100.00  E-value=7.3e-67  Score=537.02  Aligned_cols=373  Identities=28%  Similarity=0.463  Sum_probs=314.8

Q ss_pred             CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250           81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS  160 (514)
Q Consensus        81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~  160 (514)
                      ..|+++++++|+|+||.|||+||||.|++++++|||+||+|.+|+.+|++++.+.+.  ...+++..+++++|.+..   
T Consensus        17 ~~~~~~~~~~G~~~~d~dG~~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~~~~~~~--~~~~~~~~~la~~l~~~~---   91 (395)
T PRK03715         17 RPDIVFTHGKGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLINPSP--AFYNEPMAKLAGLLTQHS---   91 (395)
T ss_pred             CCCceEEeeecCEEEECCCCEEEECCcChhhccCCCCCHHHHHHHHHHHHhcccccc--cccCHHHHHHHHHHhhcc---
Confidence            367899999999999999999999999999999999999999999999987654332  234677889999998763   


Q ss_pred             CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcc
Q 010250          161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      +.++++|++||+|||+.|+|+++.|+.+ ..+++.+||+++++|||++.+++++++.+.++..+.+..+.+.+.++    
T Consensus        92 ~~~~v~f~~SGseA~e~Aik~ar~~~~~-~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~----  166 (395)
T PRK03715         92 CFDKVFFANSGAEANEGAIKLARKWGRK-HKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAEL----  166 (395)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHHhhc-cCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCC----
Confidence            4579999999999999999999988643 33577899999999999999999999876655544432222222111    


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL  320 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~  320 (514)
                                    ++++++++++.    +++++||+||+++++|+++|+++||++|+++|++||+++|+|||||||||+
T Consensus       167 --------------~d~~~l~~~l~----~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRt  228 (395)
T PRK03715        167 --------------NDIASVEKLIT----DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRT  228 (395)
T ss_pred             --------------chHHHHHHHcC----CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCC
Confidence                          23566776663    469999999999999999999999999999999999999999999999999


Q ss_pred             cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250          321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI  400 (514)
Q Consensus       321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~  400 (514)
                      |++|+++++++.||++|+||+|+|| +|+|+++++++++. +.       ...|++||++||++|++++++|++++++++
T Consensus       229 G~~~a~~~~gv~PDi~t~gK~lg~G-~p~~av~~~~~i~~-~~-------~~~~~~T~~g~pl~~aaala~L~~l~~~~l  299 (395)
T PRK03715        229 GTLFAYELSGIEPDIMTLGKGIGGG-VPLAALLAKAEVAV-FE-------AGDQGGTYNGNPLMTAVGVAVISQLLAPGF  299 (395)
T ss_pred             cchhhHhhcCCCCceeeehhhhhCC-cceEEEEEcccccc-cc-------CCCcCCCCCCCHHHHHHHHHHHHHHHhccH
Confidence            9999999999999999999999999 89999999999863 22       125788999999999999999999998899


Q ss_pred             HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC---CcEEEee-CCE
Q 010250          401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH---GMLVRVS-GDN  475 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---Gv~~~~~-g~~  475 (514)
                      .+++++++++|+++|+++ .+++ +.+++|.|+|+++++.++.            ...+.+.+.+.   |+++... ++.
T Consensus       300 ~~~~~~~g~~l~~~L~~l~~~~~-i~~vrG~Glm~~i~l~~~~------------~~~~~~~~~~~~~~Gi~~~~~~~~~  366 (395)
T PRK03715        300 LEGVRARGEYLKEKLLELSEERG-LEGERGEGLLRALLLGKDI------------GPQIVEKARDMQPDGLLLNAPRPNL  366 (395)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCC-cCeEEcceeEEEEEecCch------------HHHHHHHHHhccCCCEEEeecCCCE
Confidence            999999999999999988 4455 5679999999999996531            22344555555   9998754 578


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      |||+||+++|++|||+++++|+++++++
T Consensus       367 lR~~p~l~~t~~ei~~~~~~l~~~l~~~  394 (395)
T PRK03715        367 LRFMPALNVTTEEIDQMIAMLRSVLDKL  394 (395)
T ss_pred             EEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence            9999999999999999999999998754

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=100.00  E-value=1.5e-66  Score=537.34  Aligned_cols=378  Identities=31%  Similarity=0.554  Sum_probs=327.5

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.+|++++.+...  +.++++..+|+++|++++   +
T Consensus        17 ~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~la~~L~~~~---~   91 (397)
T TIGR03246        17 APFIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLWHIGN--GYTNEPVLRLAKKLVDAT---F   91 (397)
T ss_pred             CCceEEEeecCEEEeCCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhcccccC--ccCCHHHHHHHHHHHhhC---C
Confidence            68899999999999999999999999999999999999999999999988543322  235678899999999986   3


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      .++++|++||+|||+.|+|+||.|+..++.++|.+||+++++|||++.+++++++.+.++..|.+..+.+.+++++    
T Consensus        92 ~~~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  167 (397)
T TIGR03246        92 ADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYN----  167 (397)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCC----
Confidence            4699999999999999999999987654446788999999999999999999888766665555433333333322    


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                                    +.+++++++.    +++++||+||+++++|+++|+++||++|+++|++||+++|+||||+||||+|
T Consensus       168 --------------d~~~l~~~l~----~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G  229 (397)
T TIGR03246       168 --------------DLAAAKALIS----DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTG  229 (397)
T ss_pred             --------------CHHHHHHHhc----cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccc
Confidence                          2577777774    4699999999999999999999999999999999999999999999999999


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~  401 (514)
                      ++++++++++.||++++||+|+|| +|+|++++++++++.+..       ..+++||++||++|++++++|+.++++++.
T Consensus       230 ~~~a~~~~gv~pDi~t~~K~lggG-~pigav~~~~~i~~~~~~-------~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~  301 (397)
T TIGR03246       230 ELYAYMHYGVTPDILTSAKALGGG-FPIGAMLTTTEIAAHLKV-------GTHGTTYGGNPLACAVAGKVLDLVNTPELL  301 (397)
T ss_pred             cchhhhhcCCCCCEEEeehhhhCC-cceeEEEEcHHHHHhccC-------CCcCCCCCCCHHHHHHHHHHHHHHhhccHH
Confidence            999999999999999999999988 899999999999988852       257789999999999999999999888899


Q ss_pred             HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEe
Q 010250          402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS  479 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~  479 (514)
                      +++++++++|+++|+++ .+++++.+++|.|+++++++.+...         .....++..|+++|+++.+.+ +.|||+
T Consensus       302 ~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~---------~~~~~~~~~l~~~Gv~~~~~g~~~lR~~  372 (397)
T TIGR03246       302 AGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAYQ---------GKAKQFVNAAAEEGVIALIAGPNVVRFA  372 (397)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCchh---------hHHHHHHHHHHHCCeEEeecCCCEEEEe
Confidence            99999999999999988 4578888999999999999864210         125678899999999998766 679999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ||+.+|++||++++++|++++.++
T Consensus       373 p~~~~t~~~i~~~~~~l~~~l~~~  396 (397)
T TIGR03246       373 PSLVISDDDIDEGLARFERAIEQV  396 (397)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999998653

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=9.8e-67  Score=503.13  Aligned_cols=386  Identities=31%  Similarity=0.509  Sum_probs=322.9

Q ss_pred             CCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC
Q 010250           79 TDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT  158 (514)
Q Consensus        79 ~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~  158 (514)
                      ...+|+++.+++|+++||.||++||||++++|+..+||+||+|.+|+.+|+.++.+..  ....+....++++.|.+...
T Consensus        35 ~a~~pv~~~~gkg~kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~--~~~~t~eav~l~~~l~~~~~  112 (433)
T KOG1401|consen   35 YARYPVVIESGKGSKLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSS--NGYFTLEAVELEEVLSAVLG  112 (433)
T ss_pred             cCCCceeeecceeeeeecCCcceeeeeccceeccccCCCCHHHHHHHHHHHhhheecc--CccccHHHHHHHHHHHhccc
Confidence            3458899999999999999999999999999999999999999999999999976543  23344558899999999875


Q ss_pred             cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC
Q 010250          159 ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH  238 (514)
Q Consensus       159 ~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  238 (514)
                      ....++|+|+||||||||.|||+||+.+....+.++.+||.|.++|||+++++++.++...++..+++..|.+....   
T Consensus       113 ~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~---  189 (433)
T KOG1401|consen  113 KGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAE---  189 (433)
T ss_pred             CCCccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecc---
Confidence            55789999999999999999999998877666666678999999999999999999988888777776555443222   


Q ss_pred             cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc
Q 010250          239 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG  318 (514)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g  318 (514)
                                     .++..+++++++... +.|+|||+||+||+||.+++.++||..|+.+|+++|++||+||||||||
T Consensus       190 ---------------ynd~t~l~k~~~~h~-~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~g  253 (433)
T KOG1401|consen  190 ---------------YNDSTALEKLFESHK-GEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLG  253 (433)
T ss_pred             ---------------cCCHHHHHHHHHhCC-CceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCcc
Confidence                           233688999887654 5799999999999999999999999999999999999999999999999


Q ss_pred             cccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc
Q 010250          319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER  398 (514)
Q Consensus       319 r~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~  398 (514)
                      |+|..|++++++++|||.|++|.|+|| +|+|++++++++++.+.+..    ++.||+||++||++|.++..+|+.+.+.
T Consensus       254 R~g~~~a~e~~~~~PDI~t~aK~L~gG-lPigA~~v~~kV~~~i~~~~----~l~hg~Tf~gnpLacsa~~~~l~~l~~~  328 (433)
T KOG1401|consen  254 RLGYGWAQEYFGVTPDITTVAKPLGGG-LPIGATGVRDKVAEMISPGD----HLYHGGTFSGNPLACSAGIKVLDELKDP  328 (433)
T ss_pred             ccchHHHHHHhCcCCcceeehhhccCC-ceeEEEeehHHHHhhcCCCC----ccccCcccCCChhhhhHHHHHHHHHcCH
Confidence            999999999999999999999999999 89999999999999998643    4789999999999999999999999999


Q ss_pred             cHHHHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---
Q 010250          399 NIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---  473 (514)
Q Consensus       399 ~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---  473 (514)
                      ++.+++.+.++.|++.|.+. .+.+ .+...+++|+++++.+..+...             +.....+.|+++.+.+   
T Consensus       329 e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~~~-------------~~d~~~~~~ll~~~~~~~~  395 (433)
T KOG1401|consen  329 ETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPVYK-------------FADAAREQGLLILTLGKGL  395 (433)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeechhh-------------hhhhhhhhhHHHHHHhccc
Confidence            99999999999999999876 4444 2333489999999988754321             1222222222222211   


Q ss_pred             --CEEEEeC--CCCC--CHHHHHHHHHHHHHHHHHH
Q 010250          474 --DNIMMSP--PFIM--SPEEVDELISKYGKALKAT  503 (514)
Q Consensus       474 --~~iRi~p--~~~~--t~e~id~~~~~l~~~l~~~  503 (514)
                        ..+|+.|  .+++  |+|.++++++++.+.+.++
T Consensus       396 ~~~gv~i~P~~~l~~~~~~E~i~~~l~i~~~~l~~~  431 (433)
T KOG1401|consen  396 LEEGVRIAPIYLLTVEHTPEVIQRLLTILEKVLSAL  431 (433)
T ss_pred             ccceEEEeccccccccCcHHHHHHHHHHHHHHHHHh
Confidence              3578888  4444  4889999999999888765

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=100.00  E-value=4e-66  Score=537.40  Aligned_cols=411  Identities=24%  Similarity=0.319  Sum_probs=324.1

Q ss_pred             cccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccccc
Q 010250           60 TNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFW  139 (514)
Q Consensus        60 ~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~  139 (514)
                      .+++.+....++++..-....+.|+++++++|+|+||.|||+||||.+++|+++|||+||+|.+|+.+|++++.+.    
T Consensus        13 a~~~~p~g~~~~~~~~~~~~~~~p~~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~----   88 (428)
T PRK12389         13 ALEHIVGGVNSPSRSYKAVGGGAPVVMERGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAENGVLY----   88 (428)
T ss_pred             HHhhCCCCCCCccccccccCCCCCeEEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcc----
Confidence            4455555443333321111124789999999999999999999999999999999999999999999999986542    


Q ss_pred             ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcc
Q 010250          140 NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPA  219 (514)
Q Consensus       140 ~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~  219 (514)
                      ..+++...+++++|++.++  ++++|+|++||+||||.|+|+||.|      ++|.+||.++++|||++.++++.++...
T Consensus        89 ~~~~~~~~~la~~l~~~~p--~~~~v~f~~sGseA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~~~~~~~~~~~  160 (428)
T PRK12389         89 GTPTELEIEFAKMLKEAIP--SLEKVRFVNSGTEAVMTTIRVARAY------TGRTKIIKFAGCYHGHSDLVLVAAGSGP  160 (428)
T ss_pred             CCCCHHHHHHHHHHHHhCC--CCcEEEEeCCHHHHHHHHHHHHHHh------hCCCEEEEECCCcCCChHHHHHhcCCcc
Confidence            3467888999999999874  4689999999999999999999988      5788999999999999999998877533


Q ss_pred             ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 010250          220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA  299 (514)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~  299 (514)
                      .+.. .+..+.+.....++..+.++          ++.+.+++++.+. ++++++||+||+|+++|+++|+++||++|++
T Consensus       161 ~~~~-~~~~~~~~~~~~~~~~~~~~----------~d~~~l~~~l~~~-~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~  228 (428)
T PRK12389        161 STLG-TPDSAGVPKSIAQEVITVPF----------NDIEALKEALDKW-GDEVAAVLVEPIVGNFGIVEPKPGFLEAVNE  228 (428)
T ss_pred             cccC-CCCCCCCCCcccCceEEcCC----------CCHHHHHHHHHhc-CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHH
Confidence            2211 00000000000111111111          1257778777643 3689999999999999999999999999999


Q ss_pred             HHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCC
Q 010250          300 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS  379 (514)
Q Consensus       300 l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~  379 (514)
                      +|++||++||+||||||| |+|.+|+++++|+.||++|+||+|+|| +|+|++++++++++.+...    +...|++||+
T Consensus       229 lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv~PDivt~gK~lggG-~Pi~av~~~~~i~~~~~~~----~~~~~~~T~~  302 (428)
T PRK12389        229 LAHEAGALVIYDEVITAF-RFMYGGAQDLLGVEPDLTALGKIIGGG-LPIGAYGGRKDIMEQVAPL----GPAYQAGTMA  302 (428)
T ss_pred             HHHHcCCEEEEEcccccc-ccCcchhhHHhCCCCCeeeechhhcCC-CceeEEeEHHHHHhhhccC----CCcccccCCc
Confidence            999999999999999999 999888889999999999999999999 8999999999999988531    2346889999


Q ss_pred             CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEE-EeeeeeEEEEEccCCCCCCC--CCCccchH
Q 010250          380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEI-RGTGLILGTEFADNKSPNEP--FPPEWGIG  455 (514)
Q Consensus       380 ~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~--~~~~~~~~  455 (514)
                      +||++|++++++|++++++++.+++++++++|+++|+++ .+++.+.++ ++.| +++++|.........  ...+....
T Consensus       303 gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g-~~gi~~~~~~~~~~~~~~~~~~~~~  381 (428)
T PRK12389        303 GNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG-ALTVYFTDEKVTNYDQAERSDGEAF  381 (428)
T ss_pred             cCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc-EEEEEEeCCCCCChhhhcccCHHHH
Confidence            999999999999999998899999999999999999988 567877777 6667 778988653211000  00122235


Q ss_pred             HHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          456 AYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       456 ~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      ..+...|+++|+++.+.+.. .+.||+++|++||++++++|++++++
T Consensus       382 ~~~~~~l~~~Gv~~~~~~~~-~~~~~l~~t~e~id~~~~~l~~~l~~  427 (428)
T PRK12389        382 GKFFKLMLNQGINLAPSKYE-AWFLTTAHTEEDIEETLEAVDRAFAQ  427 (428)
T ss_pred             HHHHHHHHHCCcEeecCCCC-CeeecCCCCHHHHHHHHHHHHHHHHh
Confidence            67888999999999875421 23588999999999999999999864

>PLN02624 ornithine-delta-aminotransferase

Probab=100.00  E-value=3.8e-65  Score=535.34  Aligned_cols=390  Identities=28%  Similarity=0.459  Sum_probs=332.8

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||+|||+||||.||+++.++||+||+|++|+.+|++++.+.+..  ..++...+|+++|++++   +
T Consensus        57 ~p~~~~~a~G~~l~d~dG~~ylD~~sg~~~~~~Gh~~p~v~~ai~~ql~~~~~~~~~--~~~~~~~~la~~L~~~~---~  131 (474)
T PLN02624         57 IPVVFSRAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRA--FYNDKFPEFAEYLTSMF---G  131 (474)
T ss_pred             CCceEEeeeeCEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhcCCcccc--cCCHHHHHHHHHHHhhc---C
Confidence            689999999999999999999999999999999999999999999999987655432  35688899999999987   4


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhh-cC-CCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNA-LG-RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY  239 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~-~~-~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  239 (514)
                      .++++|++||+|||+.|||+|+.|+.. ++ .+++.+||.++++|||++.+++++++.+.....|++..+.+.++++.  
T Consensus       132 ~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~--  209 (474)
T PLN02624        132 YDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFG--  209 (474)
T ss_pred             CCeEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCC--
Confidence            679999999999999999999987532 22 23567899999999999999999998876666665444443333321  


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                                      +.+.+++++.. .++++++||+||+++++|++.|+++||++|+++|++||+++|+||||+||||
T Consensus       210 ----------------d~~~l~~~l~~-~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~Gr  272 (474)
T PLN02624        210 ----------------DLDALEKIFEE-DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLAR  272 (474)
T ss_pred             ----------------CHHHHHHHHHh-CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCc
Confidence                            24778887764 4468999999999999999999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|++++++++++.||++++||++++|++|+|++++++++++.+.+       ..+++||+++|++++++.++|+.+++++
T Consensus       273 tG~~~a~~~~~i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~~-------~~~~~T~~g~pl~~aaa~aaLe~l~~~~  345 (474)
T PLN02624        273 TGKMLACDWEEVRPDVVILGKALGGGVIPVSAVLADKDVMLCIKP-------GEHGSTFGGNPLASAVAMAALQVVQDEK  345 (474)
T ss_pred             CcchhhHHhcCCCCCEEEecccccCCCCcceeeeecHHHHhHhcc-------CCcCCCCCCCHHHHHHHHHHHHHHHhch
Confidence            999988899999999999999999998999999999999888752       3578899999999999999999998888


Q ss_pred             HHHHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEE
Q 010250          400 IVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNI  476 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~i  476 (514)
                      +.+++.+++++|++.|+++ .+++ .+.+++|.|+++.+++......       ......+++.|+++||++.+.+ +.|
T Consensus       346 l~~~~~~~~~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~l~~~~~~-------~~~a~~~~~~L~e~GV~v~p~~~~~l  418 (474)
T PLN02624        346 LAERSAKLGQELRDQLQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLG-------PVSAYDVCLKLKERGLLAKPTHDTII  418 (474)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeEEEEEEEecCCCcC-------hHHHHHHHHHHHhCCeEEecCCCCEE
Confidence            9999999999999999988 4566 5778999999999998543210       0124568888999999998865 569


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 010250          477 MMSPPFIMSPEEVDELISKYGKALKATEERVKE  509 (514)
Q Consensus       477 Ri~p~~~~t~e~id~~~~~l~~~l~~~~~~~~~  509 (514)
                      ||+||+.+|++||++++++|++++++-...+..
T Consensus       419 R~~p~l~~t~e~id~~l~~L~~~l~~~~~~~~~  451 (474)
T PLN02624        419 RLAPPLSISEDELQECSKALSDVLEHDLPKLQS  451 (474)
T ss_pred             EEECCccCCHHHHHHHHHHHHHHHHHHHHHhHH
Confidence            999999999999999999999998776655544

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=100.00  E-value=1.5e-65  Score=533.17  Aligned_cols=396  Identities=22%  Similarity=0.347  Sum_probs=317.6

Q ss_pred             CCeE--EEeeeCcEEEeC-CCCEEEEccCCcccccCCCCCHHHH--HHHHHHHhcCCcc-ccccccCCchHHHHHHHHHH
Q 010250           82 HPLV--IEKSEGSYVYDV-NGKKYLDSLAGLWCTALGGSEPRLV--AAATAQLNTLPFY-HSFWNRTTKPSLDLAKELLE  155 (514)
Q Consensus        82 ~p~~--~~~~~G~~~~d~-dG~~ylD~~s~~~~~~lGh~~p~v~--~A~~~~l~~~~~~-~~~~~~~~~~~~ela~~L~~  155 (514)
                      +|++  +++++|+|+||. |||+||||.+|+|+++|||+||+|+  +|+.+|++++.+. .......++...+++++|++
T Consensus        17 ~p~~~~~~~a~G~~l~D~~dG~~ylD~~~g~~~~~lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~   96 (431)
T TIGR03251        17 FDLVLDLDRSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFAR   96 (431)
T ss_pred             CceeeEEEeccCCEEEECCCCCChhhcccChhhcCCCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHH
Confidence            4554  699999999996 9999999999999999999999999  9999999876432 12223356777899999998


Q ss_pred             hcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhh----cCCCC--ccEEEEEecCCcccceeeeecCCCccccCCCCCCCC
Q 010250          156 MFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA----LGRPN--KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAP  229 (514)
Q Consensus       156 ~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~----~~~~~--~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~  229 (514)
                      ..++.++++|+|+|||+||||+|+|+||.|+.+    ++++.  |.+||.++++|||+|.+++++++.+.++..+.+..+
T Consensus        97 ~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~  176 (431)
T TIGR03251        97 VLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFD  176 (431)
T ss_pred             hcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCC
Confidence            863446789999999999999999999998532    34432  678999999999999999999886545544332111


Q ss_pred             cccccCCCCcccCCCCC---CChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCC
Q 010250          230 FVLHTDCPHYWRYAHPG---ETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDI  306 (514)
Q Consensus       230 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gi  306 (514)
                       ..+++.|.. +++++.   ...+.+..++++++++.+.. .++++|+||+||+|+++|+++|+++||++|+++|++||+
T Consensus       177 -~~~~~~p~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~  253 (431)
T TIGR03251       177 -WPRIDNPKL-TFPLDAPNLDQVIALEEEALRQARAAFAE-RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDA  253 (431)
T ss_pred             -CccCCCCcc-cCCccccccchhhHHHHHHHHHHHHHHHh-CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCC
Confidence             122333322 222221   11233445667788887764 457899999999999999999999999999999999999


Q ss_pred             EEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHH
Q 010250          307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA  386 (514)
Q Consensus       307 llI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~a  386 (514)
                      +||+|||||||||+|++|+++++|+.||++++||++     |+++++.++++.+.......  ....+++||++||++|+
T Consensus       254 llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~~gK~~-----~~~g~~~~~~i~~~~~~~~~--~~~~~~~T~~gnpl~~a  326 (431)
T TIGR03251       254 LLIFDEVQTGVGLTGTAWAYQQLGVQPDIVAFGKKT-----QVCGIMAGRRVDEVADNVFA--VPSRLNSTWGGNLVDMV  326 (431)
T ss_pred             EEEEecchhccCccchHHHHHhcCCCCCEEEecccC-----ccceEEecchHHHhhhhccc--CccccCCCCCCCHHHHH
Confidence            999999999999999999999999999999999996     45666676655333221000  12247889999999999


Q ss_pred             HHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH
Q 010250          387 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK  464 (514)
Q Consensus       387 aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~  464 (514)
                      +++++|++++++++.+++++++++|+++|+++ .+++ ++.+++|.|+|+++++.+..           ....+...|++
T Consensus       327 aa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~~-----------~~~~~~~~l~~  395 (431)
T TIGR03251       327 RATRILEIIEEERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTA-----------DRDEVIRQLYR  395 (431)
T ss_pred             HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCHH-----------HHHHHHHHHHh
Confidence            99999999998899999999999999999987 5677 88899999999999995321           24568889999


Q ss_pred             CCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250          465 HGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       465 ~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~  498 (514)
                      +|+++.+.+ +.+||+||+.+|++|||+++++|++
T Consensus       396 ~Gvl~~~~g~~~lr~~P~l~~t~~eid~~l~~l~~  430 (431)
T TIGR03251       396 EGVLLLGCGERSIRFRPPLTVTREEIDAAIDAIRR  430 (431)
T ss_pred             CCeEEecCCCCeEEEECCccCCHHHHHHHHHHHHh
Confidence            999998866 6799999999999999999999876

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=100.00  E-value=3.9e-65  Score=528.27  Aligned_cols=380  Identities=29%  Similarity=0.511  Sum_probs=327.3

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||.|||+||||.+++|+++|||+||+|++|+.+|++++.+...  ...++...+++++|++++   +
T Consensus        21 ~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~--~~~~~~~~~la~~l~~~~---~   95 (406)
T PRK12381         21 APFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHTGN--GYTNEPVLRLAKKLIDAT---F   95 (406)
T ss_pred             CCceEEEeecCEEEeCCCCEEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccccC--ccCCHHHHHHHHHHHhhC---C
Confidence            67899999999999999999999999999999999999999999999987644322  235677889999999986   3


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      .++|+|++||+|||+.|+|+|+.|+...+.+++.+|+.++++|||++.+++++++.+.++..|.+..+.+.+++++    
T Consensus        96 ~~~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  171 (406)
T PRK12381         96 ADRVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYN----  171 (406)
T ss_pred             CCeEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCC----
Confidence            5799999999999999999999886544445788999999999999999999998877666555433333333222    


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                                    +++++++++.    +++++||+||+++++|+++|+++||++|+++|++||++||+||||+||||+|
T Consensus       172 --------------d~~~l~~~l~----~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G  233 (406)
T PRK12381        172 --------------DLNSASALID----DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTG  233 (406)
T ss_pred             --------------CHHHHHHhcc----CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCc
Confidence                          2467777664    4799999999999999999999999999999999999999999999999999


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~  401 (514)
                      ++++++++++.||+++|||+|+|| +|+|++++++++++.+..       ..+++||++||++|+++.++|++++++++.
T Consensus       234 ~~~~~~~~~v~pDi~t~sK~l~gG-~~ig~~~~~~~~~~~~~~-------~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~  305 (406)
T PRK12381        234 ELYAYMHYGVTPDVLTTAKALGGG-FPIGAMLTTEKCASVMTV-------GTHGTTYGGNPLASAVAGKVLELINTPEML  305 (406)
T ss_pred             chhhhHhhCCCCCEEEehhhhhCC-CceEEEEEcHHHHhhcCC-------CCCCCCCCCCHHHHHHHHHHHHHHhhccHH
Confidence            988888999999999999999988 899999999999988852       357789999999999999999999888899


Q ss_pred             HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEe
Q 010250          402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS  479 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~  479 (514)
                      ++++++++++++.|+++ .+++.+..+++.|+++++++.+...         .....+...|+++||++.+.+ +.|||+
T Consensus       306 ~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~~---------~~~~~~~~~l~~~Gv~v~~~g~~~lRl~  376 (406)
T PRK12381        306 NGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEYA---------GKAKQISQEAAKAGVMVLIAGPNVVRFA  376 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCchh---------hHHHHHHHHHHHCCcEEeeCCCCEEEEe
Confidence            99999999999999988 4577788999999999999865210         124568889999999998765 679999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      ||+++|+++|++++++|+++++++.+
T Consensus       377 p~~~~t~~~i~~~~~~l~~~l~~~~~  402 (406)
T PRK12381        377 PALNISEEEITTGLDRFARACERFVS  402 (406)
T ss_pred             CCccCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999999999999999976543

>PLN00144 acetylornithine transaminase

Probab=100.00  E-value=2.3e-65  Score=524.43  Aligned_cols=371  Identities=30%  Similarity=0.540  Sum_probs=321.5

Q ss_pred             EEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeE
Q 010250           86 IEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKV  165 (514)
Q Consensus        86 ~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v  165 (514)
                      +++++|+|+||+|||+||||.+++|+++|||+||+|.+|+.+|++++.+.+..  ..++...+++++|++..   +.++|
T Consensus         1 ~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~la~~l~~~~---~~~~v   75 (382)
T PLN00144          1 FVSGKGCKLYDVEGKEYLDMAAGIAVNALGHGDPDWVKAVAEQAGTLAHVSNV--YHTIPQVELAKRLVASS---FADRV   75 (382)
T ss_pred             CeeeeccEEEeCCCCEEEECCcCHHhccCCCCCHHHHHHHHHHHHhcCCcccc--ccCHHHHHHHHHHHhcC---CCCeE
Confidence            46899999999999999999999999999999999999999999987654332  24678899999999875   35799


Q ss_pred             EEeCChhHHHHHHHHHHHHHHhhcCCCC-------ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC
Q 010250          166 FFTNSGSEANDTQVKLVWYYNNALGRPN-------KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH  238 (514)
Q Consensus       166 ~~~~sGseA~~~Alk~a~~~~~~~~~~~-------~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  238 (514)
                      +|++||+||+|.|+|+||.|+.+++.+.       |.+||.++++|||++.+++++++.+.++..+.+..+.+.+++++ 
T Consensus        76 ~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-  154 (382)
T PLN00144         76 FFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYG-  154 (382)
T ss_pred             EEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCC-
Confidence            9999999999999999999876544322       57899999999999999999998776665555444444443332 


Q ss_pred             cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc
Q 010250          239 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG  318 (514)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g  318 (514)
                                       +++.+++++.   ++++++||+||+||++|++.++++|+++|+++|++||+++|.||||+|||
T Consensus       155 -----------------d~~~l~~~~~---~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~g  214 (382)
T PLN00144        155 -----------------NLEAARKLIQ---KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLG  214 (382)
T ss_pred             -----------------CHHHHHHhcC---CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCC
Confidence                             1467777663   36799999999999999999999999999999999999999999999999


Q ss_pred             cccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc
Q 010250          319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER  398 (514)
Q Consensus       319 r~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~  398 (514)
                      |+|++++++++++.||++||||+|++| +|+|++++++++++.+..       ..+++||++||++|+++.++|++++++
T Consensus       215 r~g~~~~~~~~~~~PDi~t~sK~l~~G-~pig~v~~~~~~~~~~~~-------~~~~~T~~~~pl~~aaa~a~l~~i~~~  286 (382)
T PLN00144        215 RTGYLWAHEAYGVEPDIMTLAKPLAGG-LPIGAVLVTEKVASAINP-------GDHGSTFAGGPLVCNAALAVLDKISKP  286 (382)
T ss_pred             ccchHhhhhhcCCCCCEEEecccccCC-cceEEEEEcHHHHhccCC-------CCCCCCCCCCHHHHHHHHHHHHHHhhc
Confidence            999988888999999999999999999 899999999999988852       257789999999999999999999988


Q ss_pred             cHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--CE
Q 010250          399 NIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DN  475 (514)
Q Consensus       399 ~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--~~  475 (514)
                      ++.++++++++++++.|+++ .++|.+..++|.|++++++|...             ...+...|+++||++.+.+  +.
T Consensus       287 ~~~~~~~~~g~~l~~~l~~~~~~~~~~~~vrg~G~~~~l~l~~~-------------~~~~~~~~~~~Gv~i~~~~~~~~  353 (382)
T PLN00144        287 GFLASVAKKGEYLRELLRRKLGGNPHVKEVRGVGLLVGIQLDVP-------------AGPLVDACRDSGLLVLTAGKGDV  353 (382)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCCCceeeecCceEEEEEecCc-------------cHHHHHHHHHCCeEEeecCCCCE
Confidence            99999999999999999886 66788889999999999999311             2357889999999998764  78


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      |||+||+++|+++|++++++|++++.++
T Consensus       354 lrl~p~~~~~~~~i~~~~~~l~~~l~~~  381 (382)
T PLN00144        354 VRLVPPLVISEAELEQAVEILADCLPAL  381 (382)
T ss_pred             EEEeCCCccCHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999998754

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=100.00  E-value=4.6e-65  Score=530.72  Aligned_cols=414  Identities=23%  Similarity=0.321  Sum_probs=324.3

Q ss_pred             cccccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhc
Q 010250           52 SSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNT  131 (514)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~  131 (514)
                      .+++..+..+++.+....++++... ..+++|+++.+++|+|+||+|||+||||.+++++++|||+||+|.+|+.+|+++
T Consensus        52 ~S~~l~~ra~~~~pgGv~~~~r~~~-~~~~~p~~~~~a~G~~l~D~dG~~yiD~~~g~g~~~lGh~~p~v~~av~~ql~~  130 (474)
T PLN02482         52 KSEEIFKAAKELMPGGVNSPVRAFK-SVGGQPIVFDRVKGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKK  130 (474)
T ss_pred             HHHHHHHHHHhhCCCCCCCcchhhc-ccCCCCeeEEEeeeCEEEECCCCEEEEecccccccccCCCCHHHHHHHHHHHhh
Confidence            3445555677777777666665432 234579999999999999999999999999999999999999999999999998


Q ss_pred             CCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccccee-
Q 010250          132 LPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI-  210 (514)
Q Consensus       132 ~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~-  210 (514)
                      +...    +.+++...+|+|+|++.++  +.++|+|+|||+||++.|+|+||+|      ++|.+||.|+++|||++.. 
T Consensus       131 ~~~~----~~~~~~~~~lAe~l~~~~p--~~~~v~f~~SGsEA~e~AlklAR~~------tgr~~Ii~~~g~YHG~~~~~  198 (474)
T PLN02482        131 GTSF----GAPCLLENVLAEMVIDAVP--SVEMVRFVNSGTEACMGVLRLARAY------TGREKIIKFEGCYHGHADSF  198 (474)
T ss_pred             CCCC----CCCCHHHHHHHHHHHHhCC--CCCEEEEeCChHHHHHHHHHHHHHh------cCCCEEEEECCccCCCcchh
Confidence            6532    3467888999999999974  3789999999999999999999988      6788999999999998743 


Q ss_pred             -eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccC
Q 010250          211 -AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPP  289 (514)
Q Consensus       211 -~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p  289 (514)
                       +.+.++........   .+.++....++..+          +.+++.+++++++.+ .++++++||+||+++++|+++|
T Consensus       199 ~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~----------~~~nd~~~l~~~l~~-~~~~iAavI~Epv~g~~G~i~p  264 (474)
T PLN02482        199 LVKAGSGVATLGLPD---SPGVPKAATSATLT----------APYNDLEAVKKLFEA-NKGEIAAVILEPVVGNSGFIVP  264 (474)
T ss_pred             hhhcCCCccccCCCC---CCCCCCCCCCCeEE----------ecCCChHHHHHHHHh-CCCceEEEEECCCCCCCCCcCC
Confidence             33333221111000   11111111111111          122345778887764 4578999999999999999999


Q ss_pred             ChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCC
Q 010250          290 PATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTL  369 (514)
Q Consensus       290 ~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~  369 (514)
                      +++||++|+++|++||++||+|||+||| |+|.+|+.+++|+.||++||||+|+|| +|+|++++++++++.+...    
T Consensus       265 ~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv~PDi~t~gK~lggG-~Pigav~g~~ei~~~~~~~----  338 (474)
T PLN02482        265 KKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGITPDLTTLGKVIGGG-LPVGAYGGRREIMEMVAPA----  338 (474)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCCCCCEEEecchhhCC-CceEEEEEcHHHHHhhccC----
Confidence            9999999999999999999999999999 999999999999999999999999999 8999999999999998631    


Q ss_pred             CcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCC--Cce-eEEEeeeeeEEEEEccCCCCC
Q 010250          370 GSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDS--PII-GEIRGTGLILGTEFADNKSPN  445 (514)
Q Consensus       370 ~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~--~~~-~~v~g~g~~~~i~~~~~~~~~  445 (514)
                      +.+.|++||++||++|++++++|++++++++.+++++++++|+++|+++ .++  +.+ ..+   +.+++++|..+....
T Consensus       339 ~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v---~g~~gi~f~~~~~~~  415 (474)
T PLN02482        339 GPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYI---SGMFGFFFTEGPVYN  415 (474)
T ss_pred             CCcccccCcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEccc---ceEEEEEEecCCccC
Confidence            2457889999999999999999999998899999999999999999988 443  433 233   337888886532110


Q ss_pred             --CCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          446 --EPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       446 --~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                        .....+......+...|+++||++.+.+...+ .||+.+|++|||++++++++++.+
T Consensus       416 ~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~~-~psl~ht~~dId~~l~al~~~l~~  473 (474)
T PLN02482        416 FADAKKSDTAKFARFHRGMLEEGVYLAPSQFEAG-FTSLAHTEEDIDFTIAAAERVLAR  473 (474)
T ss_pred             hhhhccCCHHHHHHHHHHHHHCCeEEeccCCCCC-cCCCCCCHHHHHHHHHHHHHHHHh
Confidence              00011222345688899999999987543222 389999999999999999999865

>PRK06149 hypothetical protein; Provisional

Probab=100.00  E-value=1e-64  Score=571.81  Aligned_cols=395  Identities=27%  Similarity=0.513  Sum_probs=327.6

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||.|||+||||.+++  .++||+||+|++|+.+|++++.+.+.+   .++...+|+++|+++++ .+
T Consensus       567 ~p~~i~~g~G~~l~D~dG~~ylD~~~~~--~~lGh~hp~v~~Ai~~q~~~l~~~~~~---~~~~~~elae~L~~~~p-~~  640 (972)
T PRK06149        567 DPPQIERGWRHHLFDMAGRSYLDMVNNV--TVLGHGHPRLAAAAARQWSLLNTNSRF---HYAAVAEFSERLAALAP-DG  640 (972)
T ss_pred             CCCeEEEeeeeEEEeCCCCEEEECCCCc--cccCCCCHHHHHHHHHHHHhccccccc---cCHHHHHHHHHHHHhCC-CC
Confidence            5789999999999999999999999885  479999999999999999987544322   45778999999999974 45


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCC-CCCCCcccccCCCCcc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF-DLPAPFVLHTDCPHYW  240 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~  240 (514)
                      +++|+|+|||+|||+.|||+||.|      ++|.+||+++++|||+|.++.++++........ ....+.+..++.|+.+
T Consensus       641 ~~~v~f~~SGsEA~e~AlklAr~~------tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~  714 (972)
T PRK06149        641 LDTVFLVNSGSEANDLAIRLAWAA------SGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTY  714 (972)
T ss_pred             cCEEEEeCCchHHHHHHHHHHHHh------cCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCccc
Confidence            789999999999999999999988      568899999999999999988776542211111 1112334556667666


Q ss_pred             cCCCCCCC-hhHHHHHHHHHHHHHHHH--hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc
Q 010250          241 RYAHPGET-EEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF  317 (514)
Q Consensus       241 ~~~~~~~~-~~~~~~~~~~~le~li~~--~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~  317 (514)
                      +.++...+ ..++    .+++++.+..  ..++++++||+||++|++|+++||++||++|+++|++||+++|+|||||||
T Consensus       715 ~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGf  790 (972)
T PRK06149        715 RGRFRGADSAADY----VRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGY  790 (972)
T ss_pred             CCcCCCcccHHHH----HHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcC
Confidence            65543222 1222    3444444432  234689999999999999999999999999999999999999999999999


Q ss_pred             ccccc-cceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh
Q 010250          318 GRLGT-MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK  396 (514)
Q Consensus       318 gr~G~-~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~  396 (514)
                      ||+|+ +|+++++|+.|||+|+||+|+|| +|+|++++++++++.+...    +  .+++|+++||++|++++++|++++
T Consensus       791 GRtG~~~~a~e~~gv~PDivt~gK~lg~G-~Pl~av~~~~~i~~~~~~~----~--~~~sT~~gnP~~~aaala~L~~i~  863 (972)
T PRK06149        791 GRLGHYFWGFEQQGVVPDIITMAKGMGNG-HPLGAVITRREIAEALEAE----G--YFFSSTGGSPVSCRIGMAVLDVLR  863 (972)
T ss_pred             CccCccchhhhhcCCCCCEEEecccccCC-eeeEEEEEcHHHHhhhccC----C--cccCCCCCCHHHHHHHHHHHHHHH
Confidence            99998 67999999999999999999999 8999999999999988631    1  345789999999999999999999


Q ss_pred             hccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--
Q 010250          397 ERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--  473 (514)
Q Consensus       397 ~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--  473 (514)
                      ++++.+++++++++|+++|+++ .+++++.+++|.|+|++++|..+..+..+   .......+...|+++||++.+.|  
T Consensus       864 ~e~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~---~~~~~~~i~~~l~~~Gvl~~~~g~~  940 (972)
T PRK06149        864 EEKLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEP---ATEETAAICDRLLELGVIMQPTGDH  940 (972)
T ss_pred             hcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCC---ChHHHHHHHHHHHhCCeEEeecCCC
Confidence            9999999999999999999998 56899999999999999999653322211   11235678899999999999866  


Q ss_pred             -CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          474 -DNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       474 -~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                       +.|||.||+++|++|||+++++|++++.+
T Consensus       941 ~~vl~~~Ppl~it~~~id~~~~~l~~~l~~  970 (972)
T PRK06149        941 LNILKIKPPLCLDRESADFFVDMLDRVLTE  970 (972)
T ss_pred             CCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence             67999999999999999999999999864

>PRK07046 aminotransferase; Validated

Probab=100.00  E-value=1.3e-64  Score=526.92  Aligned_cols=388  Identities=17%  Similarity=0.221  Sum_probs=313.2

Q ss_pred             CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250           81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS  160 (514)
Q Consensus        81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~  160 (514)
                      ++|+++++++|+|+||+|||+||||.+++++++|||+||+|.+|+.+|++++...    ..+++...+++|+|++.+   
T Consensus        56 ~~p~~~~~a~G~~v~D~DG~~yiD~~~g~g~~~lGh~~p~i~~Av~~q~~~~~~~----~~~~~~~~~lAe~l~~~~---  128 (453)
T PRK07046         56 PFPLFVAEARGARFTDVDGHRYDDFCLGDTGAMFGHSPAPVARALAEQARRGLTT----MLPSEDAAWVGEELARRF---  128 (453)
T ss_pred             CCCCeEEeeeeCEEEeCCCCEEEEecccccccccCCCCHHHHHHHHHHHHhCCCC----CCCCHHHHHHHHHHHHHh---
Confidence            5799999999999999999999999999999999999999999999999986432    346788899999999987   


Q ss_pred             CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec--CCCccccCCCC-CCCCcccccCCC
Q 010250          161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL--SGLPALHQKFD-LPAPFVLHTDCP  237 (514)
Q Consensus       161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~--s~~~~~~~~~~-~~~~~~~~~~~~  237 (514)
                      +.++|+|+|||+||++.|+|+||.|      ++|++||.|+++|||++...+..  ++.+..+..+. .+....     +
T Consensus       129 ~~~~v~F~nSGtEA~e~AlrlAR~~------TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~-----~  197 (453)
T PRK07046        129 GLPYWQVATTATDANRFVLRWARAV------TGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLT-----A  197 (453)
T ss_pred             CCCEEEEECCHHHHHHHHHHHHHHh------hCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCcccc-----C
Confidence            3689999999999999999999988      57899999999999996544432  22222211111 110000     0


Q ss_pred             CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc
Q 010250          238 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF  317 (514)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~  317 (514)
                      +...          +..++.+.+++++.   ++++|+||+||+++++|+++|+++||++|+++|+|||++||+|||+| |
T Consensus       198 ~~~~----------~~~nd~~~l~~~l~---~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-f  263 (453)
T PRK07046        198 TTRV----------VEFNDLAALEAALA---DGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-I  263 (453)
T ss_pred             ceEe----------eCCCCHHHHHHHhC---CCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-C
Confidence            0000          11123567777763   36899999999999999999999999999999999999999999999 5


Q ss_pred             ccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccC--CCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250          318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN--TLGSFSHGFTYSGHPVSCAVAIEALKIY  395 (514)
Q Consensus       318 gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~--~~~~~~~~~t~~~~pl~~aaa~aal~~~  395 (514)
                       |+|..+..+++|++||++|+||+|+|| +|+|++++++++++.+.....  ..+.+.|++||++||++|++++++|+++
T Consensus       264 -r~g~Gg~~~~~gv~PDi~t~gK~lggG-~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l  341 (453)
T PRK07046        264 -SSGPGGYTRAHGLEPDFLVVGKPIAGG-VPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEV  341 (453)
T ss_pred             -ccCCcchhHHhCCCccceeehhhhcCC-CcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHH
Confidence             566666678899999999999999999 899999999999999863211  1234468899999999999999999999


Q ss_pred             hhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCC--CC-CCccchHHHHHHHHHHCCcEEEe
Q 010250          396 KERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNE--PF-PPEWGIGAYFGAQCEKHGMLVRV  471 (514)
Q Consensus       396 ~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~--~~-~~~~~~~~~~~~~l~~~Gv~~~~  471 (514)
                      +++++++++++++++|+++|+++ .+++++..++|.|+++.+.|.+......  .. +.+......+...|+++||++.+
T Consensus       342 ~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~  421 (453)
T PRK07046        342 MTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITP  421 (453)
T ss_pred             hcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEec
Confidence            98899999999999999999987 5678888999999999999864321110  00 00122456678889999999988


Q ss_pred             eCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          472 SGDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       472 ~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      .++.++++|+  +|++|||+++++++++++++.
T Consensus       422 ~~~~~~~~p~--~t~~did~~~~~~~~~l~~~~  452 (453)
T PRK07046        422 FHNMMLVCPA--TTAADVDRLVAAFDACLGELL  452 (453)
T ss_pred             ccCcEEEeCC--CCHHHHHHHHHHHHHHHHHHh
Confidence            7777899986  999999999999999997653

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=100.00  E-value=6.2e-66  Score=519.99  Aligned_cols=337  Identities=38%  Similarity=0.693  Sum_probs=294.8

Q ss_pred             EEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCe
Q 010250           85 VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAK  164 (514)
Q Consensus        85 ~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~  164 (514)
                      +|++++|+|+||.|||+||||++++++++|||+||+|.+|+.++++++.+.+ +...+++...+|+++|.+.++. ++++
T Consensus         1 ~i~~a~G~~l~d~dG~~~lD~~~~~~~~~lGh~~p~i~~ai~~~~~~~~~~~-~~~~~~~~~~~la~~L~~~~p~-~~~~   78 (339)
T PF00202_consen    1 FIERAEGAYLWDVDGREYLDFMSGYGSVNLGHNHPEIAEAIAEQANKLNYVS-FSGFTHPEAAELAEKLAELFPG-GLDR   78 (339)
T ss_dssp             EEEEEEBTEEEETTSEEEEESSHHHHTTTT-BT-HHHHHHHHHHHHHCSSCS-TTTSEEHHHHHHHHHHHHHSST-TEEE
T ss_pred             CeEEeecCEEEECCCCEEEECCCCccceecCCCccccchhHHHHhhhccccc-ccceeccchhhhhhhhhhcccc-ccce
Confidence            5899999999999999999999999999999999999999999999876653 2244678889999999999854 7899


Q ss_pred             EEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCC
Q 010250          165 VFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAH  244 (514)
Q Consensus       165 v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (514)
                      |+|++||+||||.|||+|+.|+.....++|.+||.|+++|||+|.+++++++.+.++..+.+..+.+.++|+|+..+   
T Consensus        79 v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~---  155 (339)
T PF00202_consen   79 VFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAA---  155 (339)
T ss_dssp             EEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHH---
T ss_pred             eeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccch---
Confidence            99999999999999999998877777788999999999999999999999988888877776666666666665322   


Q ss_pred             CCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc
Q 010250          245 PGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF  324 (514)
Q Consensus       245 ~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~  324 (514)
                           ++......+++++++.+..++++++||+||+|+++|.++++++||++|+++|+|||++||+|||||||||+|++|
T Consensus       156 -----~~~~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~  230 (339)
T PF00202_consen  156 -----DEEEQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFF  230 (339)
T ss_dssp             -----HHHHHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSS
T ss_pred             -----hhhHHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcc
Confidence                 223334456666666666568999999999999999999999999999999999999999999999999999999


Q ss_pred             eecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHH
Q 010250          325 GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV  404 (514)
Q Consensus       325 ~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~  404 (514)
                      +++++|++||++|+||+|+|| +|+|++++++++++.+..       ..|++||++||++|++++++|+.++++++.+++
T Consensus       231 a~~~~gv~PDiv~~gK~l~gG-~p~sav~~~~~i~~~~~~-------~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~  302 (339)
T PF00202_consen  231 ASEHYGVDPDIVTFGKGLGGG-LPISAVLGSEEIMEAFQP-------GSHGSTFGGNPLSCAAALATLEILEEEDLLERV  302 (339)
T ss_dssp             GHHHHTSSSSEEEEEGGGGTT-SSEEEEEEEHHHHTTSCT-------TSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHH
T ss_pred             ceecccccCcccccccchhhh-hhcccccccchhhccccc-------cccccccccchHhhhhhhhHHHhhccHHHHHHH
Confidence            999999999999999999999 899999999999998853       248899999999999999999999999999999


Q ss_pred             HHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEc
Q 010250          405 NKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFA  439 (514)
Q Consensus       405 ~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~  439 (514)
                      ++++++|+++|+++ .+++.+..++|.|+|++++|.
T Consensus       303 ~~~g~~l~~~L~~l~~~~~~i~~vrg~Gl~~~ie~~  338 (339)
T PF00202_consen  303 RELGERLREGLRELAARYPLIGEVRGIGLMIGIELV  338 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEETTEEEEEES
T ss_pred             HHHHHHHHHHHHHHHHhCCCeEEEeeeCeEEEEEEE
Confidence            99999999999999 456999999999999999985

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=100.00  E-value=5.9e-64  Score=518.52  Aligned_cols=408  Identities=21%  Similarity=0.295  Sum_probs=323.4

Q ss_pred             cccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccc
Q 010250           58 STTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS  137 (514)
Q Consensus        58 ~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~  137 (514)
                      +...++.+....++++ .+...++.|+++++++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.+|++++...  
T Consensus        12 ~~a~~~~p~g~~~~~~-~~~~~~~~p~~i~~a~G~~l~D~dG~~yiD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~--   88 (433)
T PRK00615         12 SEACQYFPGGVNSPVR-ACRSVGITPPIVSSASGDIFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERGTSY--   88 (433)
T ss_pred             HHHHhhCCCCcCCCcc-cccccCCCCceEEEeeeCEEEECCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCCCC--
Confidence            3345565655544444 2333345899999999999999999999999999999999999999999999999886422  


Q ss_pred             ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccc---eeeeec
Q 010250          138 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGST---LIAASL  214 (514)
Q Consensus       138 ~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t---~~~~~~  214 (514)
                        ..+++...+|+++|++.++ .+.++|+|++||+||++.|+|+||.|      ++|.+||.++++|||++   ++++++
T Consensus        89 --~~~~~~~~~la~~L~~~~~-~~~~~v~f~~SGsEA~e~AiklAr~~------tgr~~ii~~~~~yHG~td~~~~~~~~  159 (433)
T PRK00615         89 --GLTSEQEILFAEELFSYLG-LEDHKIRFVSSGTEATMTAVRLARGI------TGRSIIIKFLGCYHGHADTLLQGISF  159 (433)
T ss_pred             --CCCCHHHHHHHHHHHHhCC-CCcCEEEEeCchHHHHHHHHHHHHHh------hCCCEEEEEcCccCCCCcccCccccc
Confidence              3457788999999999874 33579999999999999999999988      57889999999999988   666666


Q ss_pred             CCCcccc--CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChh
Q 010250          215 SGLPALH--QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPAT  292 (514)
Q Consensus       215 s~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~  292 (514)
                      ++.....  ..+...        .+...+..        +.+++.+++++++.+.. +++++||+||+++++|+++|+++
T Consensus       160 ~~~~~~~~~~~~~~~--------~~~~~~~~--------~~~~d~~~l~~~l~~~~-~~~aavI~Epv~~~~G~~~p~~~  222 (433)
T PRK00615        160 SETSLDTLTHLVDTD--------LAHPLTLS--------LPYNDFQIFQTVMNSLG-HRVAGVIFEPICANMGVVLPKPG  222 (433)
T ss_pred             CCCCcCcCCCCCCCC--------CCCCCeEe--------CCCCCHHHHHHHHHhcC-CceEEEEECCCCCCCCcccCCHH
Confidence            6532110  011000        00000000        11233577888886543 67999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcc
Q 010250          293 YFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF  372 (514)
Q Consensus       293 ~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~  372 (514)
                      ||++|+++|++||++||+||||||| |+|.+|+++++|+.||++|+||+|+|| +|+|++++++++++.+...    +.+
T Consensus       223 yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~ga~~~~gv~PDi~~~gK~lggG-~p~~av~~~~~i~~~~~~~----~~~  296 (433)
T PRK00615        223 FIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKPDITVYGKILGGG-LPAAAVVAHKSIMDHLAPE----GTI  296 (433)
T ss_pred             HHHHHHHHHHHcCCEEEEEcccccc-cccHhHHHHhcCCCCCeEEEcccccCC-cceeeeeecHHHHhhhcCC----CCc
Confidence            9999999999999999999999999 999999999999999999999999999 7999999999999988531    244


Q ss_pred             cccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cC--CCceeEEEeeeeeEEEEEccCCCCC--CC
Q 010250          373 SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SD--SPIIGEIRGTGLILGTEFADNKSPN--EP  447 (514)
Q Consensus       373 ~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~--~~~~~~v~g~g~~~~i~~~~~~~~~--~~  447 (514)
                      .+++||++||++|++++++|++++++++.+++++++++|+++|+++ .+  ++ +..++ .|+|++++|.+.....  ..
T Consensus       297 ~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~g~~-v~~~r-~G~~~~i~~~~~~~~~~~~~  374 (433)
T PRK00615        297 FQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQGFP-VSLVR-YGSMFSFFFNENRPNNLAEA  374 (433)
T ss_pred             ccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHcCCC-eEEEe-eceEEEEEEeCCCCCChHHH
Confidence            5788999999999999999999998899999999999999999886 34  44 66677 8999999997643211  11


Q ss_pred             CCCccchHHHHHHHHHHCCcEEEeeCC-EEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          448 FPPEWGIGAYFGAQCEKHGMLVRVSGD-NIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       448 ~~~~~~~~~~~~~~l~~~Gv~~~~~g~-~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      ...+......+...|+++||++.+... ..-++  ..+|++|||+++++++++++++-
T Consensus       375 ~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~ls--~~ht~~did~~~~a~~~~~~~~~  430 (433)
T PRK00615        375 QLSDIEAFQTFYQSAFSKGVYLSPSPFEASFLS--SAHSMENLDYAQNVLIDSLEKVF  430 (433)
T ss_pred             hhCCHHHHHHHHHHHHHCCeeecCcccccccee--cCCCHHHHHHHHHHHHHHHHHHh
Confidence            111223456788999999999886431 12234  77999999999999999998763

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=100.00  E-value=4.8e-62  Score=504.27  Aligned_cols=371  Identities=28%  Similarity=0.509  Sum_probs=318.5

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++|+|+|+||.|||+||||.+|+++.+|||+||+|++|+.+|++++.+.+..  ..++...+|+++|+++.   +
T Consensus        22 ~p~~~~~~~G~~l~d~~G~~~lD~~~g~~~~~lGh~~p~v~~ai~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~---~   96 (396)
T PRK04073         22 LPIVISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTLTSRA--FHSDQLGPWYEKVAKLT---G   96 (396)
T ss_pred             CCceEEeeeecEEEECCCCEEEEcCCCHHhccCCCCCHHHHHHHHHHHhhccccccc--cCCHHHHHHHHHHHhcC---C
Confidence            688999999999999999999999999999999999999999999999987654332  25677899999999986   3


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhh-cC-CCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNA-LG-RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY  239 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~-~~-~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  239 (514)
                      .++++|++||+|||++|||+|+.|+.. ++ .++|++||.++++|||++.+++++++.+.+...+.+..+.+.+++++  
T Consensus        97 ~~~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  174 (396)
T PRK04073         97 KDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYG--  174 (396)
T ss_pred             CCeEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCC--
Confidence            479999999999999999999987432 13 25678999999999999999999888766655555443433333322  


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                                      +++++++.+.    +++++|++||+++++|.+.|+++||++|+++|++||+++|+||||+||||
T Consensus       175 ----------------d~~~l~~~i~----~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~  234 (396)
T PRK04073        175 ----------------DLEALKAAIT----PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGR  234 (396)
T ss_pred             ----------------CHHHHHHhcc----cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCc
Confidence                            1466666653    46899999999999999999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|++++.+++++.||+++|||++++|++|+|++++++++++.+..       ..+++||++||++|++++++|+.+++++
T Consensus       235 ~g~~~~~~~~~~~pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~~-------~~~~~t~~~~~~~~aaa~aaL~~~~~~~  307 (396)
T PRK04073        235 TGKLFACDWDNVTPDMYILGKALGGGVFPISCVAANRDILGVFTP-------GSHGSTFGGNPLACAVSIAALEVLEEEK  307 (396)
T ss_pred             CcHHHHhhhcCCCCCEEEecccccCCCCcceEEEEcHHHHhhhcC-------CCCCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence            999888888999999999999999988999999999999988852       2467899999999999999999998888


Q ss_pred             HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEE
Q 010250          400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMM  478 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi  478 (514)
                      +.+++++++++|.+.|+++ ..+.+..+++.|+++++++...             ...+.+.|+++||++.+.+ +.|||
T Consensus       308 l~~~~~~~~~~l~~~L~~l-~~~~i~~~~~~g~~~~~~~~~~-------------~~~~~~~l~~~Gv~~~~~~~~~iRi  373 (396)
T PRK04073        308 LPERSLELGEYFKEQLKEI-DNPMIKEVRGRGLFIGVELNEP-------------ARPYCEALKEEGLLCKETHETVIRF  373 (396)
T ss_pred             HHHHHHHHHHHHHHHHHhh-cCCcccceecceEEEEEEecch-------------HHHHHHHHHHCCeEEecCCCCEEEE
Confidence            9999999999999999987 3456778899999999988531             3457888999999998765 67999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      +||+.+|+|||++++++|++++
T Consensus       374 ~p~l~~t~e~i~~~~~~l~~~l  395 (396)
T PRK04073        374 APPLVITKEELDWAFEKIKAVL  395 (396)
T ss_pred             ECCcccCHHHHHHHHHHHHHHh
Confidence            9999999999999999999875

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=100.00  E-value=1.5e-61  Score=499.91  Aligned_cols=373  Identities=28%  Similarity=0.500  Sum_probs=322.2

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||+|||+||||.||+|+++|||+||+|.+|+.+|++++.+....  ..++...+++++|++..   +
T Consensus        13 ~~~~~~~~~G~~~~d~dG~~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~la~~l~~~~---~   87 (389)
T PRK01278         13 ADLAFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNL--YRIPEQERLAERLVENS---F   87 (389)
T ss_pred             CCceEEeeecCEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhcCccccc--cCChHHHHHHHHHHhhC---C
Confidence            688999999999999999999999999999999999999999999999886544332  25678899999999986   3


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      .++|+|++||+||++.|+|+++.|+..+|.++|.+||+++++|||++.+++++++.+.+...+.+..+.+.+++.+    
T Consensus        88 ~~~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  163 (389)
T PRK01278         88 ADKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFG----  163 (389)
T ss_pred             CCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCC----
Confidence            4799999999999999999999987777777788999999999999999998888766554444222222222221    


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                                    +.+++++++.    +++++|++||+++++|+++++++|+++|+++|++||++||+||||+||||+|
T Consensus       164 --------------d~~~l~~~l~----~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g  225 (389)
T PRK01278        164 --------------DIEALKAAIT----PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTG  225 (389)
T ss_pred             --------------CHHHHHHhhC----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC
Confidence                          2467777764    4799999999999999999999999999999999999999999999999999


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~  401 (514)
                      ++++++++++.||+++|||++++| +|+|++++++++++.+.       ...+++||++||+++++++++|+.++++++.
T Consensus       226 ~~~~~~~~~~~pdi~t~sK~l~~G-~~ig~~~~~~~~~~~~~-------~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~  297 (389)
T PRK01278        226 KLFAHEWAGVTPDIMAVAKGIGGG-FPLGACLATEEAAKGMT-------PGTHGSTYGGNPLAMAVGNAVLDVILAPGFL  297 (389)
T ss_pred             cceeecccCCCCCEEEEehhccCC-cceEEEEEcHHHHhccC-------CCCCCCCCCccHHHHHHHHHHHHHHhhhHHH
Confidence            988888899999999999999988 89999999999988775       2357789999999999999999999877889


Q ss_pred             HHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEE
Q 010250          402 EQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMM  478 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi  478 (514)
                      +++++++++++++|+++ ..++ ++..+++.|+++++++...             ...++..|+++||++.+.+ +.|||
T Consensus       298 ~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~~-------------~~~~~~~l~~~GV~~~p~~~~~lR~  364 (389)
T PRK01278        298 DNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVVP-------------NRDLVQALRDEGLLTVGAGDNVVRL  364 (389)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEecC-------------HHHHHHHHHHCCeEEeecCCCEEEE
Confidence            99999999999999987 4566 7788999999999988431             3468899999999999876 67999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +||+++++++|++++++|++++++
T Consensus       365 ~p~~~~~~~~i~~~l~~l~~~l~~  388 (389)
T PRK01278        365 LPPLIITEEEIDEALERLERAAES  388 (389)
T ss_pred             eCCcccCHHHHHHHHHHHHHHHHh
Confidence            999999999999999999998864

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=100.00  E-value=2.2e-59  Score=485.44  Aligned_cols=378  Identities=32%  Similarity=0.559  Sum_probs=318.8

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++.+++|+|+||.|||+||||.+|+|+++|||+||+|.+|+.++++++......  .++++..+++++|+++.   +
T Consensus        22 ~~~~~~~~~G~~~~d~dG~~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~---~   96 (403)
T PRK05093         22 AEFIPVRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHISNV--FTNEPALRLAKKLIDAT---F   96 (403)
T ss_pred             CCeeEEEeecCEEEeCCCCEEEEcCcCHHhccCCCCCHHHHHHHHHHHHhcCcccCc--cCCHHHHHHHHHHHhhC---C
Confidence            788999999999999999999999999999999999999999999999875433221  24677889999999986   3


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      .++++|++||+|||+.|+|+|+.|+.....+++.+||+++++|||++.+++++++.+.+..++.+....+.+++.     
T Consensus        97 ~~~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  171 (403)
T PRK05093         97 AERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-----  171 (403)
T ss_pred             CCEEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-----
Confidence            479999999999999999999988654444568899999999999999888887765544444322222222222     


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                                   ++++++++.+.    +++++|++||+++++|+++|+++|+++|+++|++||+++|+||||+||||+|
T Consensus       172 -------------~d~~~l~~~l~----~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g  234 (403)
T PRK05093        172 -------------NDLAAVKAVID----DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTG  234 (403)
T ss_pred             -------------CCHHHHHHHhc----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc
Confidence                         22566777663    4699999999999999999999999999999999999999999999999999


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~  401 (514)
                      ++++.+++++.||+++|||++++| +|+|++++++++++.+..       ..++.|++++|++++++.++|+.+.++++.
T Consensus       235 ~~~~~~~~~~~pdi~s~sK~l~~G-~rig~vv~~~~i~~~l~~-------~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~  306 (403)
T PRK05093        235 DLFAYMHYGVTPDILTSAKALGGG-FPIGAMLTTAEIASHFKV-------GTHGSTYGGNPLACAVAEAVFDIINTPEVL  306 (403)
T ss_pred             cchhhhhcCCCCCEEEecccccCC-cceEEEEEcHHHHhhcCC-------CCCCCCCCCCHHHHHHHHHHHHHHhhccHH
Confidence            887778899999999999999988 899999999999988862       246678999999999999999998878899


Q ss_pred             HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEe
Q 010250          402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS  479 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~  479 (514)
                      ++++++++++.+.|+++ .+.+.+..+++.|+++++.+.+...         .....++..|+++||++.+.+ +.+||+
T Consensus       307 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~~---------~~~~~~~~~l~~~Gv~v~~~g~~~lRl~  377 (403)
T PRK05093        307 EGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQYK---------GRARDFLNAAAEEGVMVLVAGPDVLRFA  377 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcch---------hHHHHHHHHHHHCCeEEecCCCCEEEEe
Confidence            99999999999999987 3456777899999999999864210         124568899999999999866 679999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      |++.+++++|++++++|++++.++
T Consensus       378 ~~~~~~~~~i~~~~~~l~~~l~~~  401 (403)
T PRK05093        378 PSLVIEEADIDEGLARFEKAVAKV  401 (403)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999988653

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=100.00  E-value=2.4e-59  Score=485.13  Aligned_cols=379  Identities=31%  Similarity=0.510  Sum_probs=321.0

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++.+++|+++||.||++||||.|++++.++||+||+|++|+.++++++.+.+..+  .++...+++++|++++   +
T Consensus        19 ~~~~~~~~~g~~~~~~~g~~~lD~~s~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~l~~~~---~   93 (401)
T TIGR01885        19 LPVVFSKAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKLTLSSRAF--YNDVFGEFAEYVTKLF---G   93 (401)
T ss_pred             CCceEEeeecCEEEeCCCCEEEEcccCHhhccCCCCCHHHHHHHHHHHHhcccccccc--CCHHHHHHHHHHHhhc---C
Confidence            6788999999999999999999999999999999999999999999998866543322  5678899999999987   3


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhc--CCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNAL--GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY  239 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~--~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  239 (514)
                      .++++|++||+|||++|+|+++.|+.+.  ..+++.+|++++++|||++.+++++++.+.+...++...+.+..++.   
T Consensus        94 ~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  170 (401)
T TIGR01885        94 YDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY---  170 (401)
T ss_pred             CCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC---
Confidence            5799999999999999999999875432  22457899999999999999999988765544444432222222222   


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                                     ++.++|++++.+. ++++++|++||+++++|.+.|+++||++|+++|++||+++|+||||+||||
T Consensus       171 ---------------~d~~~le~~l~~~-~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~  234 (401)
T TIGR01885       171 ---------------NNLEALEEALEDH-GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGR  234 (401)
T ss_pred             ---------------CCHHHHHHHHHhc-CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCc
Confidence                           1257888888654 367999999999999999999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|++++.+++++.||++++||+++||++|+|++++++++++.+..       ..+++|++++|++++++.++|+.+++++
T Consensus       235 ~G~~~~~~~~~~~~di~~~gK~l~~g~~~ig~v~~~~~i~~~~~~-------~~~~~t~~~~p~~~~aa~a~L~~i~~~~  307 (401)
T TIGR01885       235 TGKLLCVDHENVKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKP-------GEHGSTYGGNPLACAVAVAALEVLEEEK  307 (401)
T ss_pred             cchhhHHhhcCCCCCEEEeeccccCCCCCcEEEEEcHHHHhhccC-------CCCCCCCCCCHHHHHHHHHHHHHHHhcc
Confidence            999888888899999999999999988999999999999988752       2356799999999999999999998878


Q ss_pred             HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEE
Q 010250          400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMM  478 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi  478 (514)
                      +.++++++++++++.|+++ ..+++..++|.|+|+.+.+.++...        .....+...|.++||++.+.+ +.+||
T Consensus       308 l~~~~~~~~~~~~~~L~~l-~~~~~~~~~g~g~~~~i~~~~~~~~--------~~~~~l~~~l~~~Gv~v~~~~~~~lRi  378 (401)
T TIGR01885       308 LAENAEKLGEIFRDQLKKL-PKPIITEVRGRGLLNAIVIDESKTG--------RTAWDLCLKLKEKGLLAKPTHGNIIRL  378 (401)
T ss_pred             HHHHHHHHHHHHHHHHHhc-cCCceeEEeecCeeEEEEeccCcch--------hHHHHHHHHHHhCCEEEEecCCCEEEE
Confidence            9999999999999999988 3467778899999999988653210        124568899999999998765 57999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      +||+.+|+++|++++++|++++
T Consensus       379 ~p~l~~t~~~i~~~l~~l~~~l  400 (401)
T TIGR01885       379 APPLVITEEQLDEGLEIIKKVI  400 (401)
T ss_pred             eCCccCCHHHHHHHHHHHHHHh
Confidence            9999999999999999999876

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=100.00  E-value=6.4e-59  Score=483.85  Aligned_cols=418  Identities=24%  Similarity=0.355  Sum_probs=328.0

Q ss_pred             ccccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcC
Q 010250           53 SQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTL  132 (514)
Q Consensus        53 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~  132 (514)
                      +++..+..++|.+.....|... |......|+++.+++|+|+||.|||+||||.+|+++.+|||+||+|++|+.+|+++.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~a~G~~l~d~dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~   82 (426)
T PRK00062          4 SEELFERAKKLIPGGVNSPVRA-FKSVGGTPRFIERAKGAYLYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKG   82 (426)
T ss_pred             hHHHHHHHHHhCCCCcCCcccc-cCCCCCCCeEEEeCcCCEEEeCCCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhC
Confidence            3444445566766554333222 333334678999999999999999999999999999999999999999999999874


Q ss_pred             CccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee
Q 010250          133 PFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA  212 (514)
Q Consensus       133 ~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~  212 (514)
                      ..    +...++...+|+++|++.++  ++++|+|++||+|||+.|+|+++.+      +++++||+++++|||++.+..
T Consensus        83 ~~----~~~~~~~~~~la~~L~~~~~--~~~~v~~~~sGseA~e~Aik~a~~~------~g~~~ii~~~~~yHG~t~~~~  150 (426)
T PRK00062         83 LS----FGAPTELEVELAELVIELVP--SIEMVRMVNSGTEATMSAIRLARGY------TGRDKIIKFEGCYHGHADSLL  150 (426)
T ss_pred             Cc----CCCCCHHHHHHHHHHHHhCC--CCCEEEEecCHHHHHHHHHHHHHHH------hCCCeEEEEcCccCCchhhhh
Confidence            32    13356778899999999874  4689999999999999999999977      457899999999999997776


Q ss_pred             ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChh
Q 010250          213 SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPAT  292 (514)
Q Consensus       213 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~  292 (514)
                      +.++......... ..+.......+..+++          .+++.+++++.+.+. ++++++||+||+++++|+++|+++
T Consensus       151 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----------~~~d~~~l~~~i~~~-~~~~aaiivEpv~~~~G~~~~~~~  218 (426)
T PRK00062        151 VKAGSGAATLGLP-DSPGVPEDFAKHTLTA----------PYNDLEAVEELFEEY-GDEIAAVIVEPVAGNMGVVPPKPG  218 (426)
T ss_pred             hccCccccccCCC-CCCCCCcccccceEEc----------CCCCHHHHHHHHHhC-CCcEEEEEEeCCcCCCCCcCCCHH
Confidence            6654322111100 0011100000111111          122357788877643 468999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcc
Q 010250          293 YFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF  372 (514)
Q Consensus       293 ~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~  372 (514)
                      ||++|+++|++||+++|+||||+|| |+|.+++.+++++.||++++||++++| +|+|++++++++++.+...    +.+
T Consensus       219 ~l~~l~~l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~~pDi~~~gK~l~~G-~p~ga~~~~~~i~~~~~~~----~~~  292 (426)
T PRK00062        219 FLEGLRELCDEHGALLIFDEVMTGF-RVALGGAQGYYGVTPDLTTLGKIIGGG-LPVGAFGGRREIMEQLAPL----GPV  292 (426)
T ss_pred             HHHHHHHHHHHcCCEEEEeechhcc-ccCCccHHHHhCCCcchHhhhhHhhCC-CcceeeeEHHHHHHhhccC----CCc
Confidence            9999999999999999999999999 999888888999999999999999988 8999999999999988531    234


Q ss_pred             cccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCC--CC
Q 010250          373 SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEP--FP  449 (514)
Q Consensus       373 ~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~--~~  449 (514)
                      .+++|+++||++|++++++|++++++++.++++++++++++.|+++ .+++.+.+++|.|+|+++++.++......  ..
T Consensus       293 ~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~vrg~G~~~~i~l~~~~~~~~~~~~~  372 (426)
T PRK00062        293 YQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGIPLTVNRVGSMFGLFFTDEPVTNYADAKK  372 (426)
T ss_pred             eecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecceEEEEEecCCCcchhhhcc
Confidence            5778999999999999999999988889999999999999999987 56788889999999999999754221000  00


Q ss_pred             CccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          450 PEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       450 ~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      .+......+...|+++||++.+.+ +.++++  +++|++||++++++|++++.++
T Consensus       373 ~~~~~~~~i~~~l~~~Gv~v~~~~~~~~~~~--~~~t~~ei~~~~~~l~~~l~~~  425 (426)
T PRK00062        373 SDTERFARFFHAMLDEGVYLAPSQFEAGFVS--AAHTDEDIEKTLEAARKAFAAL  425 (426)
T ss_pred             ccHHHHHHHHHHHHHCCeEeecCCcCceeee--ccCCHHHHHHHHHHHHHHHHhh
Confidence            011234678899999999998765 567775  8999999999999999998654

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=100.00  E-value=1.1e-58  Score=483.55  Aligned_cols=409  Identities=24%  Similarity=0.386  Sum_probs=321.3

Q ss_pred             ccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccc
Q 010250           59 TTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSF  138 (514)
Q Consensus        59 ~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~  138 (514)
                      ...++.+.....++... ....+.|+++++|+|+|+||.|||+||||.+|+|+++|||+||+|++|+.+|++++..+   
T Consensus         8 ~~~~~~~~g~~~~~~~~-~~~~~~p~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~---   83 (423)
T TIGR00713         8 EAKQVFPGGVNSPVRAF-KSVGPTPFFVARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSY---   83 (423)
T ss_pred             HHHhhCCCCCCCccccc-ccCCCCCeeEEeccCCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcC---
Confidence            34555555543333221 11134789999999999999999999999999999999999999999999999886432   


Q ss_pred             cccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc
Q 010250          139 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP  218 (514)
Q Consensus       139 ~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~  218 (514)
                       ..+++...+|+++|++.++.  .++|+|++||+||++.|+|+|+.|      +++++||+++++|||++...++.++..
T Consensus        84 -~~~~~~~~~lae~l~~~~~~--~~~v~~~~sGseA~e~Alk~ar~~------~gr~~ii~~~~~yhG~~~~~~~~~~~~  154 (423)
T TIGR00713        84 -GAPTEAEILLAKEIISRVPS--VEMVRFVNSGTEATMSAVRLARGY------TGRDKIIKFEGCYHGHHDALLVKAGSG  154 (423)
T ss_pred             -CCCCHHHHHHHHHHHHhCCc--ccEEEEeCCHHHHHHHHHHHHHHh------hCCCEEEEEcCCCCCChhhhhccccCc
Confidence             33567789999999998743  479999999999999999999988      467899999999999976666544432


Q ss_pred             --cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHH
Q 010250          219 --ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEK  296 (514)
Q Consensus       219 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~  296 (514)
                        .....+.   +.......+..++++          +++++++++++.+. ++++++||+||+++++|.+.|+++|+++
T Consensus       155 ~~~~~~~~~---~~~~~~~~~~~~~~~----------~~d~~~l~~~i~~~-~~~~aavi~ep~~~~~G~~~~~~~~l~~  220 (423)
T TIGR00713       155 AATLGLPTS---PGVPEDFAKLTLVLP----------YNDLEALEEVFEEY-GEEIAGVIVEPVAGNMGVVPPKPEFLAG  220 (423)
T ss_pred             ccccCCCCC---CCCCcccccceEEeC----------CCCHHHHHHHHHHc-CCcEEEEEEeCCCCCCCCcCCCHHHHHH
Confidence              1111111   111111111112211          12357888887643 3679999999999999999998999999


Q ss_pred             HHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccC
Q 010250          297 VQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF  376 (514)
Q Consensus       297 l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~  376 (514)
                      |+++|++||+++|+||||+|| |+|.+++.+++++.||++||||++++| +|+|++++++++++.+...    +.+.+++
T Consensus       221 l~~l~~~~~~llI~DEv~~g~-r~g~~~~~~~~~~~pDi~t~sK~l~~G-~pig~v~~~~~i~~~~~~~----~~~~~~~  294 (423)
T TIGR00713       221 LRALTEEYGSLLIFDEVMTGF-RVALGGAQEYFGVEPDLTTLGKIIGGG-LPVGAFGGRREIMERLAPE----GPVYQAG  294 (423)
T ss_pred             HHHHHHHhCCEEEEEcccccc-ccCcchhHHHhCCCcchhhhhhhhcCC-CceeeeeEHHHHHHhhCcC----CCeeecc
Confidence            999999999999999999999 999888888899999999999999988 8999999999999988631    2345778


Q ss_pred             CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCC--CCCccc
Q 010250          377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEP--FPPEWG  453 (514)
Q Consensus       377 t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~--~~~~~~  453 (514)
                      ||++||++|++++++|+.++++++.++++++++++++.|+++ .+++++..+++.|+++++++..+......  ...+..
T Consensus       295 T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~  374 (423)
T TIGR00713       295 TLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTEEEVTNYADAKKSDTE  374 (423)
T ss_pred             CCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeccEEEEEEecCCCCChhhhhcccHH
Confidence            999999999999999999988889999999999999999876 56788888999999999998753211100  000111


Q ss_pred             hHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          454 IGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       454 ~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      ....+...|+++||++.+.+ +.+||+|+  +|+++|++++++|++++++
T Consensus       375 ~~~~~~~~l~~~Gv~v~~~~~~~~~l~~~--~t~~~i~~~~~~l~~~l~~  422 (423)
T TIGR00713       375 LFAKFFHEMLDKGVFLPPSQFEACFLSAA--HTEEDIENTIEAAEEVFAE  422 (423)
T ss_pred             HHHHHHHHHHHCCeEEecCCccceeeECC--CCHHHHHHHHHHHHHHHhh
Confidence            23467888999999987654 46899976  8999999999999999865

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=100.00  E-value=1.8e-58  Score=481.02  Aligned_cols=395  Identities=27%  Similarity=0.486  Sum_probs=326.5

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||+|||+||||.+|+++.+|||+||+|.+++.+|++++.+... ....++...+++++|++..+...
T Consensus        23 ~p~~~~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~~~~  101 (425)
T PRK08088         23 HPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCF-QVLAYEPYLELCEKMNQKVPGDF  101 (425)
T ss_pred             CCceEEeeeeCEEEeCCCCEEEEcCCchhhcCCCCCCHHHHHHHHHHHhhCCCccc-cccCCHHHHHHHHHHHHhCCCCC
Confidence            57899999999999999999999999999999999999999999999998654321 11235677899999999864322


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCcc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      .++++|++||+||++.|+|+|+.+      +++.+||.++++|||++.+++++++.. .++.++....+.+.++++|..+
T Consensus       102 ~~~~~f~~sGsea~e~Alklar~~------~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  175 (425)
T PRK08088        102 AKKTLLVTTGSEAVENAVKIARAA------TKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPL  175 (425)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHH------hCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccc
Confidence            369999999999999999999987      467789999999999999999887642 3445555443444444444332


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHH-hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILK-EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~-~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                      +    +.+    ...++++|++++.+ ..++++++||+||+++++|.+.++++|+++|+++|++||+++|.||+|+|+||
T Consensus       176 ~----~~~----~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~  247 (425)
T PRK08088        176 H----GVS----EDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGR  247 (425)
T ss_pred             c----Ccc----HHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence            2    111    11235678887753 23578999999999999999999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|.+++++++++.||+.+|||++++| +|+|++++++++++.+..       ..+++|++++|+.++++.++|+.+++++
T Consensus       248 ~g~~~~~~~~~~~pdi~s~sK~l~~G-~rig~v~~~~~~~~~~~~-------~~~~~t~~~~~~~~~a~~~~l~~~~~~~  319 (425)
T PRK08088        248 TGTLFAMEQMGVAADLTTFAKSIAGG-FPLAGVTGRAEVMDAIAP-------GGLGGTYAGNPIACAAALAVLKVFEQEN  319 (425)
T ss_pred             CcchhHHhhcCCCCCEEEEeccccCC-CcceeeEecHHHHhhcCC-------CCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence            99888888889999999999999988 899999999999998863       2467899999999999999999998889


Q ss_pred             HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CE
Q 010250          400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DN  475 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~  475 (514)
                      +.+++++.++++++.|.++ .++|.+..++|.|+++++.|.++.....+   .......+...|.++||++.+.+   +.
T Consensus       320 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~G~~~~l~l~~~~~~~~p---~~~~~~~l~~~~~~~Gv~~~~~~~~~~~  396 (425)
T PRK08088        320 LLQKANALGEKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKP---NAKLTAQIVARARDKGLILLSCGPYYNV  396 (425)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCeEEEeccceEEEEEEecCCCCCCC---CHHHHHHHHHHHHhCCCEEecCCCCCCE
Confidence            9999999999999999988 56788889999999999999643221111   11245678899999999887643   77


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      |||+||+.+|++||++++++|++++.+
T Consensus       397 iRl~~~~~~t~~ei~~~i~~l~~~l~~  423 (425)
T PRK08088        397 LRILVPLTIEDAQIRQGLEIIAQCFDE  423 (425)
T ss_pred             EEEECCCCcCHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999864

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=100.00  E-value=3e-58  Score=476.93  Aligned_cols=371  Identities=33%  Similarity=0.589  Sum_probs=314.5

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++.+++|+++||.|||+||||.+++++++|||+||+|.+|+.+++++..+....  .+++...+++++|++.++..+
T Consensus        25 ~~~~~~~~~G~~~~d~dg~~~lD~~s~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~~  102 (398)
T PRK03244         25 PPLALVRGEGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNL--FATEPQIALAERLVELLGAPE  102 (398)
T ss_pred             CCceEEEeeecEEEECCCCEEEECCcCHhhccCCCCCHHHHHHHHHHHHhccCccCc--cCCHHHHHHHHHHHHhCCCCC
Confidence            678999999999999999999999999999999999999999999999986543221  245667899999999875334


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      .++++|++||+||++.|+++++.+       ++++||.++++|||++..++++++.+.....+....+.+..++++    
T Consensus       103 ~~~v~~~~sgsea~~~al~~~~~~-------g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  171 (398)
T PRK03244        103 GGRVFFCNSGAEANEAAFKLARLT-------GRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYG----  171 (398)
T ss_pred             CCEEEEeCchHHHHHHHHHHHHHH-------CCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCC----
Confidence            579999999999999999998743       467899999999999998888877654443333221222222211    


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                                    +.+++++++.    +++++|++||+++++|.+.|+++|+++|+++|++||+++|+||+|+||||+|
T Consensus       172 --------------d~~~l~~~~~----~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g  233 (398)
T PRK03244        172 --------------DVDALAAAVD----DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTG  233 (398)
T ss_pred             --------------CHHHHHHhhc----CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccc
Confidence                          2466777663    4789999999999999999999999999999999999999999999999999


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~  401 (514)
                      ++++++++++.||+++|||+|++| +|+|++++++++++.+..       ..+++||++||++|+++.++|++++++++.
T Consensus       234 ~~~~~~~~~~~pDi~t~sK~l~~G-~~ig~~~~~~~~~~~~~~-------~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~  305 (398)
T PRK03244        234 AWFAHQHDGVTPDVVTLAKGLGGG-LPIGACLAFGPAADLLTP-------GLHGSTFGGNPVACAAALAVLDTIASEGLL  305 (398)
T ss_pred             hHHhhhhhCCCCCEEEEchhhhCC-cccEEEEEcHHHHhhccC-------CCCcCCCCCCHHHHHHHHHHHHHHHhccHH
Confidence            988888899999999999999988 899999999999888752       357789999999999999999999888899


Q ss_pred             HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeC
Q 010250          402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSP  480 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p  480 (514)
                      +++++++++|++.|+++ +++.+..+++.|++++++++..            ....+.+.|+++|+++.+.+ +.|||+|
T Consensus       306 ~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~~~i~~~~~------------~~~~~~~~l~~~Gv~~~~~~~~~iR~~p  372 (398)
T PRK03244        306 ENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLTAP------------VAKAVEAAAREAGFLVNAVAPDVIRLAP  372 (398)
T ss_pred             HHHHHHHHHHHHHHHhc-CCCceeeEeeccEEEEEEEecc------------HHHHHHHHHHHCCeEEeecCCCEEEEEC
Confidence            99999999999999987 4577788999999999998532            14568899999999998755 7899999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          481 PFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       481 ~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      |+.+|++||++++++|++++.++.
T Consensus       373 ~~~~t~~~i~~~~~~l~~~l~~~~  396 (398)
T PRK03244        373 PLIITDAQVDAFVAALPAILDAAA  396 (398)
T ss_pred             CCcCCHHHHHHHHHHHHHHHHhcc
Confidence            999999999999999999987643

>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]

Probab=100.00  E-value=2.2e-59  Score=432.63  Aligned_cols=406  Identities=26%  Similarity=0.525  Sum_probs=337.3

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+.|+|++|.|++|.+|++|||+.++.  .-.||+||+|++|...|+.......+|   .++...+.|+.|...++  +
T Consensus        29 DP~kivRaq~QYmfDE~g~~yLDCInNV--aHvghchp~VV~A~~kQmat~~tN~RF---lhd~lv~cA~~l~stlP--e  101 (452)
T KOG1403|consen   29 DPLKIVRAQGQYMFDEEGTRYLDCINNV--AHVGHCHPEVVRAGAKQMATISTNNRF---LHDELVQCARTLTSTLP--E  101 (452)
T ss_pred             CchhhehhccceeeccCcccHHHHhhhh--hhcccCCHHHHHHHHHHHhHhcccchh---hHHHHHHHHHHHhhcCC--C
Confidence            7899999999999999999999999885  458999999999999999887655554   35677889999999875  4


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCC-cccccCCCCcc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAP-FVLHTDCPHYW  240 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~~~  240 (514)
                      ++.++|+|||+|||+.|+++||.|      ++..++|+.+..|||+....+-+|-. .+.++-+...| ++...|||+.|
T Consensus       102 Lsvc~F~NSGSEANDLALRLAR~f------tkhqDvItldHAYHGHl~s~mE~SPY-KF~~g~~v~kpd~VHVAPcPDvy  174 (452)
T KOG1403|consen  102 LSVCFFVNSGSEANDLALRLARNF------TKHQDVITLDHAYHGHLQSVMEVSPY-KFNQGGGVAKPDYVHVAPCPDVY  174 (452)
T ss_pred             ceEEEEecCCchhhHHHHHHHHhh------cccCceEEEechhccceeeeeeccce-eccCCCCcCCCceeEecCCcccc
Confidence            889999999999999999999988      67789999999999996655555432 22333344444 45667899999


Q ss_pred             cCCCCCCCh--hHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC
Q 010250          241 RYAHPGETE--EEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA  316 (514)
Q Consensus       241 ~~~~~~~~~--~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG  316 (514)
                      |..+.....  .+......+++++.+.+.  ....+|++|.|..|+-||.+.||.+|++.+.+..+.+|-++|.||||+|
T Consensus       175 rGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvG  254 (452)
T KOG1403|consen  175 RGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVG  254 (452)
T ss_pred             ccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhc
Confidence            985433211  111122345566655543  2346999999999999999999999999999999999999999999999


Q ss_pred             cccccc-cceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250          317 FGRLGT-MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY  395 (514)
Q Consensus       317 ~gr~G~-~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~  395 (514)
                      |||.|+ .|+++.|++-|||||+||.||+| .|+++++.++++.+.+...     ......||+|||++||+++++++++
T Consensus       255 FGRvG~hyWafq~y~fiPDIVtmgKpmGNG-hPVa~VattkeIA~Af~at-----gv~YFNTyGGnPVsCAv~laVm~v~  328 (452)
T KOG1403|consen  255 FGRVGSHYWAFQTYNFIPDIVTMGKPMGNG-HPVAAVATTKEIAQAFHAT-----GVEYFNTYGGNPVSCAVGLAVMRVC  328 (452)
T ss_pred             ccccchhhhhhhhhccccchheecccCCCC-CeeeEEeccHHHHHHhccc-----cceehhccCCCchhHHHHHHHHHHH
Confidence            999997 78999999999999999999999 7999999999999999742     2345679999999999999999999


Q ss_pred             hhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEeeC
Q 010250          396 KERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVSG  473 (514)
Q Consensus       396 ~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~g  473 (514)
                      +++++.++.++.+++|...|+++ .++++++++||.|+++++++..+...+.|...   .+..+..+|++ .|+++...|
T Consensus       329 e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk---~A~~~v~rlke~y~VLlsaDG  405 (452)
T KOG1403|consen  329 EDENLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTK---EAHWVVNRLKELYRVLLSADG  405 (452)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHH---HHHHHHHHHHHhhhEEEecCC
Confidence            99999999999999999999988 68999999999999999999877666554433   24556677765 578887543


Q ss_pred             ---CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010250          474 ---DNIMMSPPFIMSPEEVDELISKYGKALKATEERVKEL  510 (514)
Q Consensus       474 ---~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~~~~  510 (514)
                         +.+.|.||.+.+++++++.+..|++.|.-+.+++...
T Consensus       406 Ph~NilKiKPPmCFneena~e~v~~ld~iLT~mee~~~s~  445 (452)
T KOG1403|consen  406 PHRNILKIKPPMCFNEENADEFVLGLDEILTVMEERLASA  445 (452)
T ss_pred             CCCceeecCCCcccChhhHHHHHHHHHHHHHHHHHHHhhh
Confidence               6799999999999999999999999999777777553

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=100.00  E-value=1.1e-57  Score=469.53  Aligned_cols=365  Identities=32%  Similarity=0.508  Sum_probs=310.0

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      +|+++++++|+|+||+|||+||||.||+++++|||+||+|++|+.++++++.+.+..  ..++...++++++.+..   +
T Consensus        11 ~~~~~~~~~G~~~~d~~G~~~lD~~s~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~la~~l~~~~---~   85 (377)
T PRK02936         11 FPIDIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIWHVSNL--FTNSLQEEVASLLAENS---A   85 (377)
T ss_pred             CCceEEEeecCEEEeCCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccc--cCCHHHHHHHHHHHhcC---C
Confidence            678999999999999999999999999999999999999999999999875443222  24567788888888765   2


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      .++++|++||+||++.|+++++.+      +++++||+++++|||++..++++++.+..+..+.+..+.+..++.     
T Consensus        86 ~~~~~~~~sG~~a~~~A~~~a~~~------~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  154 (377)
T PRK02936         86 GDLVFFCNSGAEANEAALKLARKH------TGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPF-----  154 (377)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHh------cCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCC-----
Confidence            468999999999999999999876      567899999999999999988888765555444433222222221     


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                                   ++.+++++++.    +++++|++||+++++|.++++++||++|+++|++||+++|+||||+||||+|
T Consensus       155 -------------~d~~~l~~~~~----~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g  217 (377)
T PRK02936        155 -------------NDIKALKEVMN----EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTG  217 (377)
T ss_pred             -------------CCHHHHHHhcc----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc
Confidence                         12466777664    4689999999999999999999999999999999999999999999999999


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~  401 (514)
                      ++++++++++.||++++||++++| +|+|++++++++++.+..       ..+.+|+++||++++++.++|+.+.++++.
T Consensus       218 ~~~~~~~~~~~~di~t~sK~l~~G-~~ig~v~~~~~~~~~~~~-------~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~  289 (377)
T PRK02936        218 TLFAYEQFGLDPDIVTVAKGLGNG-IPVGAMIGKKELGTAFGP-------GSHGSTFGGNPLAMAAAKEVLQVIKQPSFL  289 (377)
T ss_pred             hhhHHHhhCCCCcEEEEcccccCC-CccEEEEEcHHHHhhccC-------CCCCCCCCCCHHHHHHHHHHHHHHHhccHH
Confidence            887778889999999999999987 899999999999988852       246678999999999999999998777889


Q ss_pred             HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEe
Q 010250          402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS  479 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~  479 (514)
                      ++++++++++++.|+++ .+++.+..+++.|+++++++.+.             ...+...|.++||++.+.+ +.|||+
T Consensus       290 ~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~~~~i~~~~~-------------~~~~~~~l~~~gv~v~~~g~~~lRi~  356 (377)
T PRK02936        290 EEVQEKGEYFLQKLQEELEHLECVKNIRGKGLMIGIECTEE-------------VAPVIEQLREEGLLVLSAGPNVIRLL  356 (377)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCcEEeEeecceEEEEEecch-------------HHHHHHHHHHCCeEEecCCCCEEEEE
Confidence            99999999999999985 55777888889999999998642             3457788999999999876 679999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l  500 (514)
                      ||+.+|+++|++++++|++++
T Consensus       357 p~~~~~~~~i~~~i~~l~~~~  377 (377)
T PRK02936        357 PPLVVTKEELDQAVYLLKKVL  377 (377)
T ss_pred             CCcccCHHHHHHHHHHHHHhC
Confidence            999999999999999998764

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=100.00  E-value=5.2e-57  Score=468.10  Aligned_cols=375  Identities=29%  Similarity=0.498  Sum_probs=314.6

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++.+++|+|+||+|||+||||.+++++.++||+||+|.+|+.++++++.+.+..  ..++...+++++|+++++   
T Consensus        23 ~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~~Gh~~~~i~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~---   97 (401)
T PRK00854         23 LDVVLTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLTSRA--FRNDQLAPLYEELAALTG---   97 (401)
T ss_pred             CCceEEeeeeCEEEECCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccc--cCCHHHHHHHHHHHhhCC---
Confidence            678899999999999999999999999999999999999999999999987654332  246778899999999863   


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhh-cC-CCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNA-LG-RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY  239 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~-~~-~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  239 (514)
                      .++++|++||+||++.|+++++.|+.. .+ .++|++||+++.+|||++...+++++.+..+..+.+..+.+..++.+  
T Consensus        98 ~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  175 (401)
T PRK00854         98 SHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFG--  175 (401)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCC--
Confidence            469999999999999999999987432 12 23567999999999999988887777665544444333333333222  


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                                      +.+++++.+.    +++++|++||++|++|.+.|+++||++|+++|++||+++|+||+|+|||+
T Consensus       176 ----------------d~~~le~~i~----~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~  235 (401)
T PRK00854        176 ----------------DAEALEAAIT----PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGR  235 (401)
T ss_pred             ----------------CHHHHHHHhC----CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCC
Confidence                            2467777764    46899999999999999999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|++++.+++++.||++++||+|+||++|+|++++++++++.+..       ..++.||+++|+++++++++|+.+++++
T Consensus       236 ~g~~~~~~~~g~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~~-------~~~~~t~~~~~~~~aa~~a~L~~l~~~~  308 (401)
T PRK00854        236 TGKLLAEEHEGIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKP-------GQHGSTFGGNPLACAVARAALKVLTEEG  308 (401)
T ss_pred             CchHhHHhhcCCCCCEEEecccccCCccCeEEEEEcHHHHhcccC-------CCCCCCCCcCHHHHHHHHHHHHHHHHcC
Confidence            998777788999999999999999998899999999999987752       2466789999999999999999988778


Q ss_pred             HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEEE
Q 010250          400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMM  478 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iRi  478 (514)
                      +.++++++++++.+.|+++. .+.+..+++.|.++.+.+.....          ....+++.|+++||++.+. ++.|||
T Consensus       309 ~~~~~~~~~~~l~~~L~~~~-~~~~~~~~g~g~~~~i~~~~~~~----------~~~~~~~~L~~~GV~v~~~~~~~lR~  377 (401)
T PRK00854        309 MIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLAVELEPEAG----------GARQYCEALKERGLLAKDTHDHTIRL  377 (401)
T ss_pred             HHHHHHHHHHHHHHHHHhhc-cCceEEEeccceEEEEEEecCch----------hHHHHHHHHHHCCeEEecCCCCEEEE
Confidence            99999999999999999872 34456788999999998854311          1456889999999999875 468999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      +||+.+|+++|++++++|++++.
T Consensus       378 ~p~~~~t~e~i~~~i~~l~~~l~  400 (401)
T PRK00854        378 APPLVITREQVDWALEQIAKVLA  400 (401)
T ss_pred             eCCcccCHHHHHHHHHHHHHHhh
Confidence            99999999999999999998763

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=100.00  E-value=3.1e-56  Score=462.28  Aligned_cols=381  Identities=32%  Similarity=0.534  Sum_probs=315.2

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++.+++|+|+||.|||+||||++|+++.++||+||+|++|+.++++++.+.+..+  .++...++++.+.+++   +
T Consensus        13 ~~~~~~~~~G~~~~d~dg~~~lD~~~~~~~~~~Gh~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~---~   87 (400)
T PTZ00125         13 LPVVLKRGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAF--YNDVLGLAEKYITDLF---G   87 (400)
T ss_pred             CCccEEeeecCEEEeCCCCEEEEcccCHhhccCCcCCHHHHHHHHHHHHhcccccccc--cCHHHHHHHHHHHhCC---C
Confidence            6789999999999999999999999999999999999999999999998876554322  3456677888887765   4


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhc-C-CCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNAL-G-RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY  239 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~-~-~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  239 (514)
                      .++++|++||+|||+.|+++++.++... + .+++++||+++++|||++...++.++.......+....+.+..+++   
T Consensus        88 ~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  164 (400)
T PTZ00125         88 YDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDY---  164 (400)
T ss_pred             CCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCC---
Confidence            6799999999999999999998664221 1 1356899999999999999988877654333222221121111111   


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                                     ++++++++.+.   .+++++|++||+++++|++.|+++|+++|+++|++||+++|+||||+||||
T Consensus       165 ---------------~d~~~le~~l~---~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~  226 (400)
T PTZ00125        165 ---------------NDVEALEKLLQ---DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGR  226 (400)
T ss_pred             ---------------CCHHHHHHHhC---CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCc
Confidence                           23577887774   257999999999999999999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|+++..+.+++.||++++||++++|++|+|++++++++++.+..       ..++.|++++|++++++.++|+.+++++
T Consensus       227 ~G~~~~~~~~~~~pd~~~~sK~l~~g~~~ig~v~~~~~~~~~~~~-------~~~~~t~~~~~~~~~aa~~~l~~i~~~~  299 (400)
T PTZ00125        227 TGKLLAHDHEGVKPDIVLLGKALSGGLYPISAVLANDDVMLVIKP-------GEHGSTYGGNPLACAVAVEALEVLKEEK  299 (400)
T ss_pred             cchhhHHHhcCCCCCEEEEcccccCCCcCcEEEEEcHHHHhhccC-------CCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence            998878888899999999999999997799999999999988753       2456789999999999999999998888


Q ss_pred             HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEE
Q 010250          400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIM  477 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iR  477 (514)
                      +.+++++++++++++|+++ ..++.+..+++.|+++++.+.....         .....+.+.|+++||++.+.+ +.||
T Consensus       300 ~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~v~~~~~~~---------~~~~~~~~~l~~~Gv~v~~~~~~~lR  370 (400)
T PTZ00125        300 LAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHSDG---------VNAWDLCLKLKENGLLAKPTHDNIIR  370 (400)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCeEEEecccEEEEEEEccCcc---------hHHHHHHHHHHHCCeEEeecCCCEEE
Confidence            9999999999999999887 4567777889999999998864211         024568889999999998865 6799


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      |+|++.+++++|++++++|++++.++.
T Consensus       371 i~~~~~~~~~~i~~~l~~l~~~l~~~~  397 (400)
T PTZ00125        371 FAPPLVITKEQLDQALEIIKKVLKSFD  397 (400)
T ss_pred             EECCccCCHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999887653

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=100.00  E-value=1.9e-56  Score=464.91  Aligned_cols=377  Identities=22%  Similarity=0.358  Sum_probs=293.4

Q ss_pred             CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250           81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS  160 (514)
Q Consensus        81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~  160 (514)
                      ..|+++++++|+|+||.|||+||||.+++|+++|||+||+|++|+.+|++++...    ..++....+++++|++.++  
T Consensus        29 ~~p~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~----~~~~~~~~~la~~l~~~~p--  102 (431)
T PRK06209         29 LAPGFIQRGSGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCNF----TRPSAIELDAAESFLELID--  102 (431)
T ss_pred             CCCeEEEeccCCEEEeCCCCEEEEccccccchhcCCCCHHHHHHHHHHHHhCcCC----CCCCHHHHHHHHHHHHhCC--
Confidence            3689999999999999999999999999999999999999999999999986532    3345556689999999874  


Q ss_pred             CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEE-ecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250          161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIAR-QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY  239 (514)
Q Consensus       161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~-~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  239 (514)
                      +.++|+|+|||+||||.|+|+||.|      ++|.+|+.+ .++|||........+  +. .  .+.+.... .  .+  
T Consensus       103 ~~~~v~f~~sGseA~e~AlklAr~~------tgr~~i~~~~~~~~h~~~~~~~g~~--~~-~--~~~~~~~~-~--~~--  166 (431)
T PRK06209        103 GADMVKFCKNGSDATSAAVRLARAY------TGRDLVARCADHPFFSTDDWFIGTT--PM-S--AGIPASVS-A--LT--  166 (431)
T ss_pred             ccceEEEecCHHHHHHHHHHHHHHH------hCCCeEEEeccCccccccccccccC--CC-C--CCCChhHh-c--cc--
Confidence            3579999999999999999999988      567889998 677876421111000  00 0  00000000 0  00  


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                                ..+.+++++++++++.+ .++++++||+||++++    .|+++||++|+++|++||++||+|||||||++
T Consensus       167 ----------~~~~~~d~~~l~~~l~~-~~~~~aavi~Epv~g~----~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~  231 (431)
T PRK06209        167 ----------VTFRYNDIASLEALFED-HPGRIACVILEPATAD----EPQDGFLHEVRRLCHENGALFILDEMITGFRW  231 (431)
T ss_pred             ----------cccCCCCHHHHHHHHHh-CCCCEEEEEEccccCC----CCCHHHHHHHHHHHHHcCCEEEEEcccccCCc
Confidence                      01223446888888864 3468999999999986    77889999999999999999999999999977


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHH--hhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEV--IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE  397 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~--l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~  397 (514)
                      ++ .+..+++++.||++|+||+|+|| +|+|++++++++++.  +... ...+.+.|++|+++||++|++++++|+++++
T Consensus       232 ~~-~g~~~~~gv~PDi~t~gK~lggG-~p~~av~~~~~i~~~~~~~~~-~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~  308 (431)
T PRK06209        232 HM-RGAQKLYGIVPDLSCFGKALGNG-FAVSALAGKREYMELGGLEHT-DRERVFLLSTTHGAETHALAAAIATMAIYRD  308 (431)
T ss_pred             Cc-chhhHHhCCCcceeeehhhhcCC-cccEEEEEHHHHHhhhccccc-CCCCceeeccCCCCCHHHHHHHHHHHHHHhc
Confidence            53 33445689999999999999999 799999999999987  3211 1123556889999999999999999999998


Q ss_pred             ccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEE
Q 010250          398 RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNI  476 (514)
Q Consensus       398 ~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~i  476 (514)
                      +++.+++++++++|++.|+++ .+++++..+++.|++..+.+........+   .......+...|+++|+++.    .+
T Consensus       309 ~~~~~~~~~~g~~l~~~L~~~~~~~~~~~~vr~~G~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~Gi~~p----~l  381 (431)
T PRK06209        309 EDVIERLHEQGAKLAAGVNEAAAEHGLQDHVRVSGRPCCLTYSTLDGNGQP---SQAFRTLFLQETIRRGVLMP----SL  381 (431)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeecceEEEEEecCCcccCC---cHHHHHHHHHHHHHCCcccc----cc
Confidence            899999999999999999987 56788888999999888877532211111   11233467788999999863    24


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250          477 MMSPPFIMSPEEVDELISKYGKALKATEER  506 (514)
Q Consensus       477 Ri~p~~~~t~e~id~~~~~l~~~l~~~~~~  506 (514)
                      +++  ..+|++||++++++|+++++++.+.
T Consensus       382 ~is--~~ht~~dId~~l~~l~~~l~~~~~~  409 (431)
T PRK06209        382 VVS--YAHGDADIERTIDAVHGALGVYRKA  409 (431)
T ss_pred             ccc--ccCCHHHHHHHHHHHHHHHHHHHHH
Confidence            455  6779999999999999999887543

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=100.00  E-value=1.7e-54  Score=445.05  Aligned_cols=363  Identities=27%  Similarity=0.444  Sum_probs=300.1

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||+||++||||.|++++.+||| ||+|++|+.++++++..+...  ...+...++++.+...    .
T Consensus        11 ~~~~~~~~~G~~l~d~dg~~~lD~~s~~~~~~lG~-~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~la~~l~~~----~   83 (375)
T PRK04260         11 AAIEFVKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAGLIWHSPNL--YLNSLQEEVAQKLIGD----K   83 (375)
T ss_pred             CCceEEEeeeCEEEeCCCCEEEECCCCcccccCCC-CHHHHHHHHHHHHhcCcccCc--cCCHHHHHHHHHHhcC----c
Confidence            57899999999999999999999999999999999 999999999999875433221  1344455566555432    2


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      ...++|++||+|||+.|+++++.+      +++.+||+++++|||++..+++.++.+...+.+.+..+.+...  +    
T Consensus        84 ~~~~~~~~SGseA~~~Al~~ar~~------~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----  151 (375)
T PRK04260         84 DYLAFFCNSGAEANEAAIKIARKA------TGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA--I----  151 (375)
T ss_pred             CCEEEEcCccHHHHHHHHHHHHHh------cCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe--C----
Confidence            236899999999999999999876      4577999999999999988888877655444444221111100  0    


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                                  +++.+++++.+.    +++++|++||+++++|++.++++||++++++|++||+++|+||+|+|||++|
T Consensus       152 ------------~~dl~~l~~~l~----~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g  215 (375)
T PRK04260        152 ------------FNDLNSVKALVN----KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTG  215 (375)
T ss_pred             ------------CCCHHHHHHhcC----CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc
Confidence                        112566776653    4689999999999999999999999999999999999999999999999999


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~  401 (514)
                      .++.++.+++.||++||||+|++| +|+|++++++++++.+..       ..+.+||+++|++++++.++|+.++++++.
T Consensus       216 ~~~~~~~~~~~pdi~t~sK~l~~G-~~ig~~~~~~~~~~~~~~-------~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~  287 (375)
T PRK04260        216 KLYAFEHYGIEPDIFTLAKGLANG-VPVGAMLAKSSLGGAFGY-------GSHGSTFGGNKLSMAAASATLDIMLTAGFL  287 (375)
T ss_pred             chhhhHhhCCCCCEEEecccccCC-cceEEEEEcHHHHhhcCC-------CCCCCCCCcCHHHHHHHHHHHHHHHhhHHH
Confidence            877878889999999999999988 899999999999888752       246789999999999999999999878899


Q ss_pred             HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEe
Q 010250          402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS  479 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~  479 (514)
                      +++++.++++++.|.++ .+++.+..+++.|+++++++...             ...+.+.|+++||++.+.+ +.||++
T Consensus       288 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~-------------~~~~~~~l~~~Gi~v~~~~~~~lR~~  354 (375)
T PRK04260        288 EQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETTAD-------------LSQLVEAARDKGLIVLTAGTNVIRLL  354 (375)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCCeeEEeccceEEEEEecCc-------------HHHHHHHHHhCCCEEecCCCCEEEEc
Confidence            99999999999999876 55666778889999999998421             3458899999999998766 579999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l  500 (514)
                      ||+.+|++||++++++|++++
T Consensus       355 ~~~~~t~~~i~~~l~~l~~~~  375 (375)
T PRK04260        355 PPLTLTKEEIEQGIAILSEVF  375 (375)
T ss_pred             CCCccCHHHHHHHHHHHHHhC
Confidence            999999999999999998753

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=100.00  E-value=1.3e-53  Score=442.17  Aligned_cols=372  Identities=33%  Similarity=0.590  Sum_probs=311.0

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+++||.|||+||||.+|+++++|||+||+|.+|+.+++++......  ..+.+...+++++|++..   +
T Consensus        21 ~~~~~~~~~G~~~~d~dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~la~~l~~~~---~   95 (396)
T PRK02627         21 LPIAFVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSN--LYYIEPQEELAEKLVELS---G   95 (396)
T ss_pred             CCceEEeeeeCEEEeCCCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhcccccc--ccCCHHHHHHHHHHHhhc---C
Confidence            68899999999999999999999999999999999999999999999987543222  235677889999999985   4


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      .++++|++||+||++.|+++++.+....+ .++.+|++++++|||++..+++.++.+.++..+....+.+..++      
T Consensus        96 ~~~v~~~~gg~eA~~~al~~a~~~~~~~~-~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  168 (396)
T PRK02627         96 MDKVFFCNSGAEANEAAIKLARKYGHKKG-IEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVP------  168 (396)
T ss_pred             CCEEEECCCcHHHHHHHHHHHHHHhcccC-CCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeC------
Confidence            68999999999999999999987743222 12378999999999999888888776544333322111111111      


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                                  +++++++++++.    +++++|++||+++++|+.+++++++++|+++|++||++||+||+|+||||+|
T Consensus       169 ------------~~d~~~l~~~i~----~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g  232 (396)
T PRK02627        169 ------------FNDIEALKAAIT----DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTG  232 (396)
T ss_pred             ------------CCCHHHHHHhcC----CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccC
Confidence                        112467777663    5789999999999999888899999999999999999999999999999999


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~  401 (514)
                      ++++++.+++.||+++|||++++| +|+|++++++++++.+..       ..+..|+++||++++++.++|+.++++++.
T Consensus       233 ~~~~~~~~~~~pdi~t~sK~~~~G-~rig~~~~~~~~~~~~~~-------~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~  304 (396)
T PRK02627        233 KLFAYQHYGIEPDIMTLAKGLGGG-VPIGAVLAKEKVADVFTP-------GDHGSTFGGNPLACAAALAVIEIIEEEGLL  304 (396)
T ss_pred             ceeeehhcCCCCCEEEEcchhhCC-cccEEEEEcHHHHhccCC-------CCCCCCCCCCHHHHHHHHHHHHHHhhccHH
Confidence            888888889999999999999987 899999999999888752       246689999999999999999998888899


Q ss_pred             HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEe
Q 010250          402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS  479 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~  479 (514)
                      ++++++++++++.|+++ .+++.+..+++.|+++++++.. .            ...+...|+++||++.+.+ +.+||+
T Consensus       305 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~~-~------------~~~~~~~l~~~Gv~v~~~~~~~lRi~  371 (396)
T PRK02627        305 ENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIELDR-P------------AAEIVKKALEKGLLINVTGDNVLRLL  371 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCeeeeccCcEEEEEEecC-c------------HHHHHHHHHHCCeEEeecCCCEEEEE
Confidence            99999999999999887 4567777888999999998831 1            3468889999999999866 569999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      |++.+|+++|++++++|++++++
T Consensus       372 ~~~~~~~~~i~~~~~~l~~~l~~  394 (396)
T PRK02627        372 PPLIISKEEIDEAVDRLEEVLKE  394 (396)
T ss_pred             CCcccCHHHHHHHHHHHHHHHHh
Confidence            99999999999999999998865

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=100.00  E-value=3.3e-53  Score=441.61  Aligned_cols=395  Identities=35%  Similarity=0.641  Sum_probs=321.4

Q ss_pred             CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250           81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS  160 (514)
Q Consensus        81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~  160 (514)
                      ..|+++++++|+++||.|||+||||.+|+++++|||+||+|++|+.++++++..+...+ +.++...+++++|+++++. 
T Consensus        17 ~~~~~~~~~~g~~~~d~dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~-   94 (413)
T cd00610          17 PYPLVIVRAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTHFSLGF-FYNEPAVELAELLLALTPE-   94 (413)
T ss_pred             CCCceEEeeecCEEEeCCCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcCccCcc-cCCHHHHHHHHHHHHhCCC-
Confidence            47899999999999999999999999999999999999999999999998765443221 2567889999999999842 


Q ss_pred             CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcc
Q 010250          161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      +.++++|++||+||++.|+++++.+      +++++||+++++|||++..++..++.+.+...+......+..++.+..+
T Consensus        95 ~~~~v~~~~sgsea~~~al~~~~~~------~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (413)
T cd00610          95 GLDKVFFVNSGTEAVEAALKLARAY------TGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRY  168 (413)
T ss_pred             CCCEEEEcCcHHHHHHHHHHHHHHH------cCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccc
Confidence            5789999999999999999999866      4578999999999999988888777654443333322333333332111


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL  320 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~  320 (514)
                      +.       ......++++|++++... ++++++|++||+++++|.+.|+++|+++|+++|++||+++|+||+|+||||+
T Consensus       169 ~~-------~~~~~~d~~~l~~~l~~~-~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~  240 (413)
T cd00610         169 RP-------PAELADDLEALEEALEEH-PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRT  240 (413)
T ss_pred             cc-------hhhHHHHHHHHHHHHhcC-CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC
Confidence            10       011223467777777532 3579999999999999999999999999999999999999999999999999


Q ss_pred             cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250          321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI  400 (514)
Q Consensus       321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~  400 (514)
                      |..+..+++++.||++++||++++| +|+|++++++++++.+..     ..+.+.+|++++|++++++.++|+.++++++
T Consensus       241 g~~~~~~~~~~~~d~~t~sK~l~~g-~~~g~~~~~~~~~~~~~~-----~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~  314 (413)
T cd00610         241 GKMFAFEHFGVEPDIVTLGKGLGGG-LPLGAVLGREEIMDAFPA-----GPGLHGGTFGGNPLACAAALAVLEVLEEEGL  314 (413)
T ss_pred             cchhhHhhcCCCCCeEEEcccccCc-cccEEEEEcHHHHHhhcc-----CCCCCCCCCCcCHHHHHHHHHHHHHHHhccH
Confidence            9887888899999999999999998 899999999999998711     2345778999999999999999999988889


Q ss_pred             HHHHHHHHHHHHhhhhhcc-CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEEE
Q 010250          401 VEQVNKIAPKFQDGVKAFS-DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMM  478 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l~-~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iRi  478 (514)
                      .++++++++++++.|+++. ..+.+..+++.|.++++.+.+......   .+......+.+.|.++||++.+. ++.+|+
T Consensus       315 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~gv~v~~~~~~~lR~  391 (413)
T cd00610         315 LENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKP---PDKELAAKIIKAALERGLLLRPSGGNVIRL  391 (413)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCC---cchHHHHHHHHHHHHCCeEEeecCCCEEEE
Confidence            9999999999999999873 346677788999999999875422110   01113566888999999999987 467999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      +|++.+|++||++++++|++++
T Consensus       392 ~~~~~~t~~~i~~~~~~l~~~l  413 (413)
T cd00610         392 LPPLIITEEEIDEGLDALDEAL  413 (413)
T ss_pred             ECCCcCCHHHHHHHHHHHHHhC
Confidence            9999999999999999998764

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]

Probab=100.00  E-value=1.4e-48  Score=368.37  Aligned_cols=391  Identities=24%  Similarity=0.393  Sum_probs=305.5

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHH-Hhc-CCccccccccCCchHHHHHHHHHHhc--
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ-LNT-LPFYHSFWNRTTKPSLDLAKELLEMF--  157 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~-l~~-~~~~~~~~~~~~~~~~ela~~L~~~~--  157 (514)
                      +++-..++-|.|++|+|||.+||.++.+.+++||+|||.+++++.+- .-+ +......-+.   +..++++.|.+-+  
T Consensus        58 F~~dYEkS~GNYlvDvDGN~lLDvYsQIsSvplGYn~P~LvK~a~~p~~~~~lvnRPALg~f---P~kd~~~~l~~~ll~  134 (484)
T KOG1405|consen   58 FFVDYEKSIGNYLVDVDGNRLLDVYSQISSVPLGYNNPALVKAAQQPQNATMLVNRPALGNF---PPKDFAEKLRQSLLS  134 (484)
T ss_pred             EehhhhhhcCceEEecCCCeeehhhhhhcccccCCCCHHHHHHhcChHHHHHHhccccccCC---ChhhHHHHHHHHHHh
Confidence            44556899999999999999999999999999999999999987642 221 1111111111   2356666665522  


Q ss_pred             -CcCCCCeEEEeCChhHHHHHHHHHHHHHHhh--cCC----------------C--CccEEEEEecCCcccceeeeecCC
Q 010250          158 -TASKMAKVFFTNSGSEANDTQVKLVWYYNNA--LGR----------------P--NKKKFIARQKSYHGSTLIAASLSG  216 (514)
Q Consensus       158 -~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~--~~~----------------~--~~~~ii~~~~~yHG~t~~~~~~s~  216 (514)
                       .+.+++.|.++-+|+.|||.|+|.|..+.++  +|.                |  ..-.|+.|.++|||+++++++.+.
T Consensus       135 ~APKG~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~  214 (484)
T KOG1405|consen  135 IAPKGQKQVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTH  214 (484)
T ss_pred             hCcchHHHHHHHhccccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCCCCceeeeeecccccccccccccccc
Confidence             2457899999999999999999988443322  221                1  134699999999999999999888


Q ss_pred             CccccCCCCCCCCcccccCCCCcccCCCCCCChhH--HHHHHHHHHHHHHHHhC--CCcEEEEEEccccCCCCcccCChh
Q 010250          217 LPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE--YSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPAT  292 (514)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~  292 (514)
                      +..+++ .++|.-.+++.++|. ++|++.....+.  -...|++++|++|.+..  ...+|++||||+|++||+...+++
T Consensus       215 SKpIHK-ldiPaFdWPiA~fP~-ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~  292 (484)
T KOG1405|consen  215 SKPIHK-LDIPAFDWPIAPFPR-YKYPLDENVAENKKEDQGCLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPD  292 (484)
T ss_pred             Cccccc-cCCCCCCCCCCCCcc-ccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHH
Confidence            776653 344444455566654 355544321111  12346788999987643  247999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC--Cchhchhhhhc-CCcccceeEEeCHHHHHHhhhccCCC
Q 010250          293 YFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK--PDLVSFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTL  369 (514)
Q Consensus       293 ~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~--pDiv~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~  369 (514)
                      |++.|+++|+|||+.+|+||||||-|-||+.|++++|++.  ||+|||||.|- ||+      .-.+++    .+.    
T Consensus       293 Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~PpD~vTFSKK~q~gGf------fh~~~f----rpn----  358 (484)
T KOG1405|consen  293 FFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSPPDVVTFSKKFQTGGF------FHDEEF----RPN----  358 (484)
T ss_pred             HHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCCccceehhhhhhcCcc------ccCccc----CCC----
Confidence            9999999999999999999999999999999999999985  99999999654 443      223332    211    


Q ss_pred             CcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCC
Q 010250          370 GSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEP  447 (514)
Q Consensus       370 ~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~  447 (514)
                      .++.+..||.|.|.-.....+++++++++++.+++...++.|..+|.++ .++| .+..+||+|.++++++....     
T Consensus       359 ~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps~~-----  433 (484)
T KOG1405|consen  359 EPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPSGS-----  433 (484)
T ss_pred             chHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCChH-----
Confidence            2456678999999999989999999999999999999999999999999 5676 56789999999999997654     


Q ss_pred             CCCccchHHHHHHHHHHCCcEEEeeCC-EEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          448 FPPEWGIGAYFGAQCEKHGMLVRVSGD-NIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       448 ~~~~~~~~~~~~~~l~~~Gv~~~~~g~-~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                            ..+.++..++-+|+.+..+|. .|||.|+++.++...+-++++|++.+..
T Consensus       434 ------~Rdk~i~~~~~nGv~~GGCg~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~  483 (484)
T KOG1405|consen  434 ------IRDKLILIARLNGVNLGGCGDKSIRFRPSLVFRKHHADIFLDIFDKILAG  483 (484)
T ss_pred             ------HHHHHHHHHHHcCceecccccceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence                  356688899999999998876 5999999999999999999999998754

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=100.00  E-value=2.7e-47  Score=392.64  Aligned_cols=370  Identities=36%  Similarity=0.614  Sum_probs=297.6

Q ss_pred             CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250           81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS  160 (514)
Q Consensus        81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~  160 (514)
                      +.|+++++++|+++||.||++||||.+|+|+++|||+||.|.+++.+++++.......  .+.+...+++++|++++   
T Consensus         8 ~~~~~~~~~~g~~~~~~~g~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~la~~~---   82 (379)
T TIGR00707         8 RLPVKIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKLVHVSNL--YYTEPQEELAEKLVEHS---   82 (379)
T ss_pred             CCCccEEEeecCEEEeCCCCEEEEcCcchhhccCCCCCHHHHHHHHHHHhhccccccc--cCCHHHHHHHHHHHhhC---
Confidence            3789999999999999999999999999999999999999999999999875432221  25677899999999997   


Q ss_pred             CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcc
Q 010250          161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      +.+++++++||+||++.|+++++.+....+ +++++|++++++|||+...+...++.+.+...+.+..+.....      
T Consensus        83 g~~~~~~~~sg~~a~~~a~~~~~~~~~~~~-~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  155 (379)
T TIGR00707        83 GADRVFFCNSGAEANEAALKLARKYTGDKG-KEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYA------  155 (379)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHHhhccC-CCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceee------
Confidence            456999999999999999998876543222 2368999999999999888777666543322111111111000      


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL  320 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~  320 (514)
                                  .+++.+++++.+.    +++++|++||+++++|.++++.+++++|.++|++||+++|+||+|+|||+.
T Consensus       156 ------------~~~d~~~l~~~~~----~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~  219 (379)
T TIGR00707       156 ------------PYNDIESLKKAID----DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRT  219 (379)
T ss_pred             ------------CCCCHHHHHHHhh----hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcc
Confidence                        0112567777664    357899999999999988888999999999999999999999999999998


Q ss_pred             cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250          321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI  400 (514)
Q Consensus       321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~  400 (514)
                      |..+..+..++.||+++|||++++| +|+|++++++++++.+..       ..++.+++.++++++++.++|+.+++.++
T Consensus       220 g~~~~~~~~~~~~d~~t~sK~~~~G-~riG~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~aaL~~~~~~~~  291 (379)
T TIGR00707       220 GKFFAYEHYGIEPDIITLAKGLGGG-VPIGATLAKEEVAEAFTP-------GDHGSTFGGNPLACAAALAVLEVIEKERL  291 (379)
T ss_pred             chhhhHHhcCCCCCEEEEcccccCC-cccEEEEEcHHHHhhhcC-------CCCCCCCCCCHHHHHHHHHHHHHHHhhhH
Confidence            8766666778899999999999977 899999999999988863       23556788999999999999998877778


Q ss_pred             HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEE
Q 010250          401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMM  478 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi  478 (514)
                      .+++++++++++++|+++ ...+. ..+++.|.++++.+.+.             ...+.+.|+++||++.+.+ +.+||
T Consensus       292 ~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~g~~~~~~~~~~-------------~~~~~~~l~~~Gv~v~~~~~~~lRi  357 (379)
T TIGR00707       292 LENVKEKGDYFKERLEELGKNYPN-KEVRGKGLMLGIELEAP-------------CKDIVKKALEKGLLVNCAGPKVLRF  357 (379)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCC-CccccCceEEEEEecCc-------------HHHHHHHHHHCCcEEeeCCCCEEEE
Confidence            999999999999999876 33332 34556788888887532             2457888999999999876 67999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      +|++.+|++++++++++|++++
T Consensus       358 ~~~~~~t~~~i~~~~~~l~~~~  379 (379)
T TIGR00707       358 LPPLIITKEEIDEAVSALEEAI  379 (379)
T ss_pred             ECCCcCCHHHHHHHHHHHHHhC
Confidence            9999999999999999998763

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>PLN02822 serine palmitoyltransferase

Probab=100.00  E-value=5.1e-40  Score=345.57  Aligned_cols=386  Identities=15%  Similarity=0.208  Sum_probs=286.8

Q ss_pred             cccccccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHH
Q 010250           50 DASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQ  128 (514)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~  128 (514)
                      +.+.++.+++.++|.|+|++.|.+....   ....++.+++|++++ +||++||||.++   +++|. +||+|++|+.++
T Consensus        63 ~~~~~~~~~l~~~~~p~~l~~~~~~~~~---~~~~~~~~~~G~~i~-~~G~~~id~~s~---~~lgl~~~~~i~ea~~~a  135 (481)
T PLN02822         63 PLTEKEIDELCDEWTPEPLIPPITEEMR---PEPPVLESAAGPHTI-INGKDVVNFASA---NYLGLIGNEKIKESCTSA  135 (481)
T ss_pred             CCCHHHHHHHHhcCCCCCCCCCCchhcc---ccCCceecCCCCeEE-ECCceEEEeECC---CcCCCCCCHHHHHHHHHH
Confidence            4566777888999999999977555433   234478999999999 899999999988   55665 699999999999


Q ss_pred             HhcCCcccc---ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCc
Q 010250          129 LNTLPFYHS---FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYH  205 (514)
Q Consensus       129 l~~~~~~~~---~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yH  205 (514)
                      +++++..++   .++++++.+.+|+++|+++++.  .+.++|++ |..++.++++..         .++.++|++++.||
T Consensus       136 l~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~--~~~i~~s~-G~~a~~sai~a~---------~~~gd~Ii~d~~~H  203 (481)
T PLN02822        136 LEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT--PDSILYSY-GLSTIFSVIPAF---------CKKGDIIVADEGVH  203 (481)
T ss_pred             HHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC--CCEEEECC-HHHHHHHHHHHh---------CCCCCEEEEeCCcc
Confidence            998554322   3456889999999999999853  35666665 445788888754         45667888999999


Q ss_pred             ccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC------CCcEEEEEEcc
Q 010250          206 GSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG------PETIAAFIAEP  279 (514)
Q Consensus       206 G~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~------~~~~aavivEp  279 (514)
                      ++...++.+++.....            ++                  +++.++++..+.+..      ++..++|++|+
T Consensus       204 ~s~~~~~~ls~~~~~~------------~~------------------~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~  253 (481)
T PLN02822        204 WGIQNGLYLSRSTIVY------------FK------------------HNDMESLRNTLEKLTAENKRKKKLRRYIVVEA  253 (481)
T ss_pred             HHHHHHHHHcCCeEEE------------EC------------------CCCHHHHHHHHHHHhhhhcccCCCcEEEEEec
Confidence            9887666666532211            00                  111344444443211      12238999999


Q ss_pred             ccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc--CcccccccceecccCC---CCchhc--hhhhhcCCcccceeE
Q 010250          280 VIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC--AFGRLGTMFGCDKYSI---KPDLVS--FAKALSSAYMPIGAI  352 (514)
Q Consensus       280 v~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t--G~gr~G~~~~~~~~gv---~pDiv~--~sK~l~gG~~pig~v  352 (514)
                      +++++|.+.|    |++|+++|++||++||+||+|+  .+|++|.+ ..+++++   .+|+++  |||+++..   -|++
T Consensus       254 i~~~~G~i~~----L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G-~~e~~~v~~~~~dii~~s~sKalg~~---GG~i  325 (481)
T PLN02822        254 IYQNSGQIAP----LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRG-LSEHFGVPIEKIDIITAAMGHALATE---GGFC  325 (481)
T ss_pred             CCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCC-hHHHcCCCCCCCeEEEecchhhhhhC---CeEE
Confidence            9999999998    9999999999999999999998  44666654 6788988   689887  88999732   2678


Q ss_pred             EeCHHHHHHhhhccCCCCcccccCCCCCc--HHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEe
Q 010250          353 LVSPEVSEVIHSQSNTLGSFSHGFTYSGH--PVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG  429 (514)
Q Consensus       353 ~~~~~i~~~l~~~~~~~~~~~~~~t~~~~--pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g  429 (514)
                      ++++++++.+..       ..++++|+++  |..+++++++|+.+++ +++.+++++++++|++.|+++.+.++  ...+
T Consensus       326 ~g~~~ii~~~~~-------~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g~~~--~~~~  396 (481)
T PLN02822        326 TGSARVVDHQRL-------SSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIPGLSI--GSNT  396 (481)
T ss_pred             EcCHHHHHHHHh-------cCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCccc--CCCC
Confidence            899999998863       2566788776  8889999999998876 57889999999999999987633222  1123


Q ss_pred             eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee----------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250          430 TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS----------GDNIMMSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       430 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~----------g~~iRi~p~~~~t~e~id~~~~~l~~  498 (514)
                      .+.++.+.+.+...   ....+......+++.|+ ++||++.+.          ...+|++....+|++||++++++|++
T Consensus       397 ~spi~~l~l~~~~~---~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~  473 (481)
T PLN02822        397 LSPIVFLHLEKSTG---SAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKR  473 (481)
T ss_pred             CCCEEEEEeCCCcc---cccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            56777787753211   11111123467888887 889999864          13599988888999999999999999


Q ss_pred             HHHHHH
Q 010250          499 ALKATE  504 (514)
Q Consensus       499 ~l~~~~  504 (514)
                      ++.++.
T Consensus       474 ~~~~~~  479 (481)
T PLN02822        474 VAASVL  479 (481)
T ss_pred             HHHHHh
Confidence            988764

>PRK07505 hypothetical protein; Provisional

Probab=100.00  E-value=1.3e-38  Score=330.10  Aligned_cols=350  Identities=19%  Similarity=0.242  Sum_probs=246.0

Q ss_pred             CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCC-CCCHHHHHHHHHHHhcCC---ccccccccCCchHHHHHHHHHHh
Q 010250           81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALG-GSEPRLVAAATAQLNTLP---FYHSFWNRTTKPSLDLAKELLEM  156 (514)
Q Consensus        81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~l~~~~---~~~~~~~~~~~~~~ela~~L~~~  156 (514)
                      +.++.+.+++|+++||.||++||||.++   .++| |+||+|++|+.+|+++..   ..++.....++...+++++|+++
T Consensus        27 ~~~~~~~~~~G~~~~d~~g~~~ld~~s~---~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~  103 (402)
T PRK07505         27 LNGLTVGEREGILITLADGHTFVNFVSC---SYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSEL  103 (402)
T ss_pred             cccceeeccCCccEEecCCceEEEeecC---CccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHH
Confidence            4667899999999999999999999885   7899 999999999999998743   11111123467789999999998


Q ss_pred             cCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC
Q 010250          157 FTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC  236 (514)
Q Consensus       157 ~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~  236 (514)
                      ++   . ++++++||++|++.++++++.+.   ..+++.++|+++++|||+.....      ......    ..+..++.
T Consensus       104 ~~---~-~~~~~~sG~~a~~~ai~~~~~~~---~~~~~~~vi~~~~~~H~s~~~~~------~~~~~~----~~v~~~~~  166 (402)
T PRK07505        104 FG---A-SVLTFTSCSAAHLGILPLLASGH---LTGGVPPHMVFDKNAHASLNILK------GICADE----TEVETIDH  166 (402)
T ss_pred             hC---C-CEEEECChHHHHHHHHHHHHhcc---cCCCCCCEEEEchhhhHhHHhhh------hhhhcC----CeEEEeCC
Confidence            73   3 78888899999999999875421   11246679999999999532111      111100    11122221


Q ss_pred             CCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechh--
Q 010250          237 PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI--  314 (514)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~--  314 (514)
                      +                  +++++++++..   +..+++++||++++|+ +.+    +++|+++|++||++||+||+|  
T Consensus       167 ~------------------d~~~l~~~~~~---~~~~~vl~~p~~~~G~-~~~----~~~i~~l~~~~~~~li~DEa~~~  220 (402)
T PRK07505        167 N------------------DLDALEDICKT---NKTVAYVADGVYSMGG-IAP----VKELLRLQEKYGLFLYIDDAHGL  220 (402)
T ss_pred             C------------------CHHHHHHHHhc---CCCEEEEEecccccCC-cCC----HHHHHHHHHHcCCEEEEECcccc
Confidence            1                  24677776642   4578999999998855 444    899999999999999999998  


Q ss_pred             cCcccccccceecccCC-CCchh----chhhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCc--HHHHH
Q 010250          315 CAFGRLGTMFGCDKYSI-KPDLV----SFAKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGH--PVSCA  386 (514)
Q Consensus       315 tG~gr~G~~~~~~~~gv-~pDiv----~~sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~--pl~~a  386 (514)
                      +|+|++|.+++.+++++ .||.+    ++||++++++   |+++. ++++++.+..       +.+.+||+++  +++++
T Consensus       221 ~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G---g~~~~~~~~~~~~~~~-------~~~~~t~~~~~~~~a~a  290 (402)
T PRK07505        221 SIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG---GVIMLGDAEQIELILR-------YAGPLAFSQSLNVAALG  290 (402)
T ss_pred             cCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---eEEEeCCHHHHHHHHH-------hCCCceeCCCCCHHHHH
Confidence            57899998777788887 68855    7999998752   56554 7888888863       2455666554  58999


Q ss_pred             HHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEE-EEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250          387 VAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILG-TEFADNKSPNEPFPPEWGIGAYFGAQCEKH  465 (514)
Q Consensus       387 aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  465 (514)
                      ++.++++++.++.+.+....    +++.++.+... ....+++.++++. +.+.+.           .....+.+.|+++
T Consensus       291 a~~a~l~~~~~~~~~~~~~~----l~~~~~~~~~~-~~~~~~g~~~~i~~~~~~~~-----------~~~~~~~~~l~~~  354 (402)
T PRK07505        291 AILASAEIHLSEELDQLQQK----LQNNIALFDSL-IPTEQSGSFLPIRLIYIGDE-----------DTAIKAAKQLLDR  354 (402)
T ss_pred             HHHHHHHHHhccCcHHHHHH----HHHHHHHHHHH-HHhcCCCCCCCEEEEEeCCH-----------HHHHHHHHHHHHC
Confidence            99999997765554433222    22222221100 0112344555443 232210           0245688999999


Q ss_pred             CcEEEee-------C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          466 GMLVRVS-------G-DNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       466 Gv~~~~~-------g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      ||++++.       + +.|||+|++.+|+||+++++++|++++++
T Consensus       355 Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~~  399 (402)
T PRK07505        355 GFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILDE  399 (402)
T ss_pred             CCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHHh
Confidence            9999864       2 57999999999999999999999988753

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=100.00  E-value=1e-35  Score=308.94  Aligned_cols=334  Identities=17%  Similarity=0.166  Sum_probs=250.9

Q ss_pred             CCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250           98 NGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE  173 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse  173 (514)
                      +|+++|+|+|+   ++||. +||+|++|+.++++++.+.   ++...+.++.+.+++++|+++++   .+++++++||++
T Consensus        43 ~~~~~~~~~sn---~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g---~~~~~~~~SG~~  116 (406)
T PRK13393         43 GPREVTVWCSN---DYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG---KEAALLFTSGYV  116 (406)
T ss_pred             CCccEEEeecc---cccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC---CCcEEEeCCcHH
Confidence            46899999999   88998 7999999999999986542   22223455678999999999984   368999999999


Q ss_pred             HHHHHHHH-HHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250          174 ANDTQVKL-VWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY  252 (514)
Q Consensus       174 A~~~Alk~-a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (514)
                      ||+.|++. ++.        .+.++|+++..||+++..++..++.+..            .++                 
T Consensus       117 An~~ai~~l~~~--------~~g~~I~~~~~~H~s~~~~~~~~g~~~~------------~~~-----------------  159 (406)
T PRK13393        117 SNWAALSTLGSR--------LPGCVILSDELNHASMIEGIRHSRAEKR------------IFR-----------------  159 (406)
T ss_pred             HHHHHHHHhhcC--------CCCCEEEEccchhHHHHHHHHHcCCeEE------------EeC-----------------
Confidence            99999995 431        1246889999999998777665443211            000                 


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-Cc-ccccccceecccC
Q 010250          253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AF-GRLGTMFGCDKYS  330 (514)
Q Consensus       253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~-gr~G~~~~~~~~g  330 (514)
                       +++.+++++++....++++++|++|++++++|.+.|    +++|+++|++||+++|+||+|+ |+ |++|..+ .++++
T Consensus       160 -~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~-~~~~~  233 (406)
T PRK13393        160 -HNDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAP----IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGI-AEREG  233 (406)
T ss_pred             -CCCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch-hhhcC
Confidence             112466777776543446789999999999999988    9999999999999999999998 77 8887654 36666


Q ss_pred             CC--Cchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc-HHHHHH
Q 010250          331 IK--PDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN-IVEQVN  405 (514)
Q Consensus       331 v~--pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~-~~~~~~  405 (514)
                      +.  +|++  +|||+++..   -|++++++++++.+....   .  ...+|++.+|.+++++.++|+.+++.. ..++++
T Consensus       234 ~~~~~~i~~~tlsKa~g~~---GG~~~~~~~~~~~l~~~~---~--~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~  305 (406)
T PRK13393        234 LADRLTIIEGTLAKAFGVM---GGYITGSAALCDFIRSFA---S--GFIFTTSLPPAVAAGALASVRHLKASSAERERHQ  305 (406)
T ss_pred             CCCCCeEEEEeCchhhccc---CceeeCCHHHHHHHHHhC---c--CceecCccCHHHHHHHHHHHHHHhhCHHHHHHHH
Confidence            65  5776  899999842   266788999988886421   0  112467788999999999999886542 345667


Q ss_pred             HHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-------C-CEE
Q 010250          406 KIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------G-DNI  476 (514)
Q Consensus       406 ~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-------g-~~i  476 (514)
                      ++++++++.|+++ ..+.   +++.|.++.+.+.+..           ....+.+.|++ +||++.+.       + +.|
T Consensus       306 ~~~~~l~~~L~~~-g~~~---~~~~~~i~~v~~~~~~-----------~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~i  370 (406)
T PRK13393        306 DRVARLRARLDKA-GIPH---LPNPSHIVPVMVGDPV-----------LCKQISDELLDRYGIYVQPINYPTVPRGTERL  370 (406)
T ss_pred             HHHHHHHHHHHHc-CCCc---CCCCCCeEEEEeCCHH-----------HHHHHHHHHHHhCCEEEEeECCCCCCCCCceE
Confidence            8889999999875 3332   2456777777653210           24567788887 59999752       3 569


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          477 MMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       477 Ri~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ||+|++.+|++|||+++++|+++++++
T Consensus       371 Ris~~~~~t~edid~l~~~l~~~~~~~  397 (406)
T PRK13393        371 RITPSPLHTDADIEHLVQALSEIWARL  397 (406)
T ss_pred             EEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence            999999999999999999999987654

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=100.00  E-value=2.4e-34  Score=288.55  Aligned_cols=335  Identities=21%  Similarity=0.302  Sum_probs=267.0

Q ss_pred             CcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCc---cccccccCCchHHHHHHHHHHhcCcCCCCeEE
Q 010250           91 GSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPF---YHSFWNRTTKPSLDLAKELLEMFTASKMAKVF  166 (514)
Q Consensus        91 G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~---~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~  166 (514)
                      +..++ .+|++++||+|+   ++||. +||++++|+.+++++.+.   .++...++.+.+.+|+++|++++   +.+.++
T Consensus        31 ~~~~~-~~~~~~~nf~SN---dYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~---g~e~al  103 (388)
T COG0156          31 GLAIR-ADGRKVLNFCSN---DYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL---GAEAAL  103 (388)
T ss_pred             Cccee-cCCceeEeeecc---CcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh---CCCcEE
Confidence            34444 569999999999   88998 699999999999988432   34566788999999999999998   567899


Q ss_pred             EeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCC
Q 010250          167 FTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPG  246 (514)
Q Consensus       167 ~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (514)
                      +++||..||.+++-..         .+++++|+.+.-.|.+...++.+++.....                         
T Consensus       104 ~f~SGy~AN~~~i~~l---------~~~~dli~~D~lnHASiidG~rls~a~~~~-------------------------  149 (388)
T COG0156         104 LFSSGFVANLGLLSAL---------LKKGDLIFSDELNHASIIDGIRLSRAEVRR-------------------------  149 (388)
T ss_pred             EEcccchhHHHHHHHh---------cCCCcEEEEechhhhhHHHHHHhCCCcEEE-------------------------
Confidence            9999999999999876         456889999999999988888877754432                         


Q ss_pred             CChhHHHHHHHHHHHHHHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--
Q 010250          247 ETEEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--  322 (514)
Q Consensus       247 ~~~~~~~~~~~~~le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--  322 (514)
                           |.|+|+++||+++++..  +.+...|++|.|+++.|++.|    |++|.+||++||++|++||+|+ +|-.|+  
T Consensus       150 -----f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiAp----L~~l~~L~~ky~a~L~VDEAHa-~Gv~G~~G  219 (388)
T COG0156         150 -----FKHNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAP----LPELVELAEKYGALLYVDEAHA-VGVLGPNG  219 (388)
T ss_pred             -----ecCCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCC----HHHHHHHHHHhCcEEEEEcccc-ccccCCCC
Confidence                 56777899999998732  115789999999999999999    9999999999999999999997 766775  


Q ss_pred             cceecccCCCCc---hh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh
Q 010250          323 MFGCDKYSIKPD---LV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE  397 (514)
Q Consensus       323 ~~~~~~~gv~pD---iv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~  397 (514)
                      .+.++++|+.++   |+  ||||+||+.+   |+++++..+.+.+....   +  ...++.+.+|..++++.++|+++++
T Consensus       220 rG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g~~~~~d~L~~~a---r--~~ifStalpP~~aaa~~~al~~l~~  291 (388)
T COG0156         220 RGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAGSAALIDYLRNRA---R--PFIFSTALPPAVAAAALAALRILEE  291 (388)
T ss_pred             ccHHHHhCCCCccceEEEEEchhhhcccC---ceeeCcHHHHHHHHHhC---C--ceeccCCCCHHHHHHHHHHHHHHHh
Confidence            445788888754   33  7999999733   78899999999998632   2  3346777889999999999999986


Q ss_pred             -ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----
Q 010250          398 -RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----  472 (514)
Q Consensus       398 -~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----  472 (514)
                       .+..++++++..++++.++.. .++.   ......++.+.+.++.           .+..+...|+++|+++.+.    
T Consensus       292 ~~~~r~~L~~~~~~~~~~~~~~-~~~~---~~s~s~I~pv~~gd~~-----------~a~~~s~~l~~~Gi~v~~i~~PT  356 (388)
T COG0156         292 GPERRERLQELAAFFRSLLKAL-GLVL---LPSESPIIPVILGDEE-----------RALEASRALLEEGIYVSAIRPPT  356 (388)
T ss_pred             CHHHHHHHHHHHHHHHHHHHhc-CCcc---CCCCCCeeeeEeCCHH-----------HHHHHHHHHHHCCeeEeeecCCC
Confidence             467899999999999666653 1111   1223445566665533           3667888999999998732    


Q ss_pred             ---C-CEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250          473 ---G-DNIMMSPPFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       473 ---g-~~iRi~p~~~~t~e~id~~~~~l~~~  499 (514)
                         | ..||++|...+|++||+.++++|.++
T Consensus       357 Vp~gtarlRi~lta~ht~~~I~~l~~~l~~~  387 (388)
T COG0156         357 VPKGTARLRITLTAAHTEEDIDRLAEALSEV  387 (388)
T ss_pred             CCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence               2 46999999999999999999998764

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=100.00  E-value=5.5e-34  Score=295.74  Aligned_cols=335  Identities=20%  Similarity=0.240  Sum_probs=248.1

Q ss_pred             CCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250           98 NGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE  173 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse  173 (514)
                      +|+++++|.|+   ++||. +||+|++|+.++++++...   ++...++++...+|+++|+++++   .+.+++++||++
T Consensus        43 ~~~~~~~~~sn---~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g---~~~~l~~~sG~~  116 (402)
T TIGR01821        43 GAKDVTVWCSN---DYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG---KESALVFTSGYV  116 (402)
T ss_pred             CCeeEEEeEcc---CcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC---CCeEEEECchHH
Confidence            56999999998   88998 6999999999999886543   22233467788999999999984   357899999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS  253 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (514)
                      ||+.+++++...       .+..+|+.+..||+++..++..++.+...            ++                  
T Consensus       117 an~~ai~~l~~~-------~~~~~v~~~~~~h~s~~~~~~~~g~~~~~------------~~------------------  159 (402)
T TIGR01821       117 ANDATLATLAKI-------IPGCVIFSDELNHASMIEGIRHSGAEKFI------------FR------------------  159 (402)
T ss_pred             HHHHHHHHhhCC-------CCCCEEEEcchHhHHHHHHHHHcCCeEEE------------EC------------------
Confidence            999999987521       13467788888999877666554432210            00                  


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-Cc-ccccccceecccCC
Q 010250          254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AF-GRLGTMFGCDKYSI  331 (514)
Q Consensus       254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~-gr~G~~~~~~~~gv  331 (514)
                      +++.+++++++....++++++|++|++++++|.+.|    +++|+++|++||++||+||+|+ |+ |..|.. ..+++++
T Consensus       160 ~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~G~~g~~g~g-~~~~~~~  234 (402)
T TIGR01821       160 HNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAP----IEEICDLADKYGALTYLDEVHAVGLYGPRGGG-IAERDGL  234 (402)
T ss_pred             CCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEeCcccccccCCCCCc-cchhccC
Confidence            112467888776544346789999999999999987    9999999999999999999998 43 455442 2456665


Q ss_pred             --CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc-cHHHHHHH
Q 010250          332 --KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER-NIVEQVNK  406 (514)
Q Consensus       332 --~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~-~~~~~~~~  406 (514)
                        .+|++  +|||++++.   .|++++++++++.+.....     ...+|.+.+|.++++++++|+.+++. .+.++.++
T Consensus       235 ~~~~div~~t~sKa~g~~---GG~i~~~~~~~~~l~~~~~-----~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~  306 (402)
T TIGR01821       235 MHRIDIIEGTLAKAFGVV---GGYIAASRKLIDAIRSYAP-----GFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQE  306 (402)
T ss_pred             CCCCeEEEEechhhhccC---CceeecCHHHHHHHHHhCc-----CceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHH
Confidence              47877  899999842   2668889999988864211     12246678999999999999988754 35667788


Q ss_pred             HHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-------C-CEEE
Q 010250          407 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------G-DNIM  477 (514)
Q Consensus       407 ~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-------g-~~iR  477 (514)
                      +++++++.|+++ ..+.+   ...+.++.+.+.+..           ....+.+.|++ +||++.+.       + +.||
T Consensus       307 ~~~~l~~~L~~~-g~~~~---~~~~~i~~i~~~~~~-----------~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lR  371 (402)
T TIGR01821       307 NVKRLKNLLEAL-GIPVI---PNPSHIVPVIIGDAA-----------LCKKVSDLLLNKHGIYVQPINYPTVPRGTERLR  371 (402)
T ss_pred             HHHHHHHHHHHc-CCCcC---CCCCCEEEEEeCCHH-----------HHHHHHHHHHhcCCEEEEeECCCCCCCCCceEE
Confidence            999999999876 33322   234666666553210           24457788765 59998753       2 4799


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ++|++.+|++||++++++|+++++++
T Consensus       372 is~~~~~t~edi~~~~~~l~~~~~~~  397 (402)
T TIGR01821       372 ITPTPAHTDKMIDDLVEALLLVWDRL  397 (402)
T ss_pred             EEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence            99999999999999999999987653

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PRK09064 5-aminolevulinate synthase; Validated

Probab=100.00  E-value=6.8e-34  Score=295.60  Aligned_cols=334  Identities=20%  Similarity=0.240  Sum_probs=247.4

Q ss_pred             CCEEEEccCCcccccCCCC-CHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHH
Q 010250           99 GKKYLDSLAGLWCTALGGS-EPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEA  174 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~-~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA  174 (514)
                      |++++||+|+   ++||++ ||+|++|+.++++++...   ++...++.+...+|+++|+++++   .++.++++||++|
T Consensus        45 ~~~~~~~~s~---dylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g---~~~~~~~~sG~~a  118 (407)
T PRK09064         45 EREVTVWCSN---DYLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG---KEAALVFTSGYVS  118 (407)
T ss_pred             CceEEEEECC---CCcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC---CCcEEEECcHHHH
Confidence            6999999998   889996 999999999999876442   22333467788999999999873   3678899999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      |+.+++++..+       .++.+|+.+..+|++...++..++.+..            ..                  .+
T Consensus       119 n~~ai~~l~~~-------~~~~~i~~~~~~h~s~~~~~~~~~~~~~------------~~------------------~~  161 (407)
T PRK09064        119 NDATLSTLAKL-------IPDCVIFSDELNHASMIEGIRRSRCEKH------------IF------------------RH  161 (407)
T ss_pred             HHHHHHHHhCC-------CCCCEEEEeCcchHHHHHHHHHcCCcEE------------EE------------------CC
Confidence            99999987522       1246777776678776555544332210            00                  01


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-C-cccccccceecccCC-
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-A-FGRLGTMFGCDKYSI-  331 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G-~gr~G~~~~~~~~gv-  331 (514)
                      ++.+++++++....++++++|++|++++++|.+.|    +++|+++|++||++||+||+|+ | ||+.|..+ .++.++ 
T Consensus       162 ~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~----l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~-~~~~~~~  236 (407)
T PRK09064        162 NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAP----IAEICDLADKYNALTYLDEVHAVGMYGPRGGGI-AERDGLM  236 (407)
T ss_pred             CCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEECCCcccccCCCCCCh-HHhcCCC
Confidence            12578888876543346789999999999999987    9999999999999999999998 6 58887654 456665 


Q ss_pred             -CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc-HHHHHHHH
Q 010250          332 -KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN-IVEQVNKI  407 (514)
Q Consensus       332 -~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~-~~~~~~~~  407 (514)
                       .+|++  ||||+++..   .|++++++++++.+....   .  .+.++.+.+|.++++++++++.+++.+ ..++++++
T Consensus       237 ~~~div~~t~sKa~g~~---GG~~~~~~~~~~~l~~~~---~--~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~  308 (407)
T PRK09064        237 DRIDIIEGTLAKAFGVM---GGYIAGSAALVDAVRSYA---P--GFIFTTSLPPAIAAAALASIRHLKESNEERERHQER  308 (407)
T ss_pred             CCCeEEEEecchhhhcc---CceEecCHHHHHHHHHhC---c--cccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence             47888  899999742   267888999988876421   1  122466788999999999999887643 45889999


Q ss_pred             HHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-------C-CEEEE
Q 010250          408 APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------G-DNIMM  478 (514)
Q Consensus       408 ~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-------g-~~iRi  478 (514)
                      ++++++.|+++ ..+++.   ..+.++.+.+.+..           ....+.+.|++ +||++.+.       + +.||+
T Consensus       309 ~~~l~~~L~~~-g~~~~~---~~~~iv~i~~~~~~-----------~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRi  373 (407)
T PRK09064        309 AAKLKAALDAA-GIPVMP---NESHIVPVMVGDPE-----------KCKKASDMLLEEHGIYVQPINYPTVPRGTERLRI  373 (407)
T ss_pred             HHHHHHHHHHc-CCCCCC---CCCCEEEEEeCCHH-----------HHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEE
Confidence            99999999876 333222   23556666553211           24567788875 59999752       2 46999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      +|++.+|++|+++++++|+++++++
T Consensus       374 s~~~~~t~edi~~l~~~l~~~~~~~  398 (407)
T PRK09064        374 TPTPFHTDEMIDHLVEALVEVWARL  398 (407)
T ss_pred             EeCCCCCHHHHHHHHHHHHHHHHHc
Confidence            9999999999999999999988654

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=100.00  E-value=6.7e-33  Score=285.36  Aligned_cols=342  Identities=16%  Similarity=0.238  Sum_probs=241.0

Q ss_pred             EEccCCcccccCCC-CCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250          103 LDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ  178 (514)
Q Consensus       103 lD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A  178 (514)
                      |||.|+   ++||. +||++++++.+++++.+..   ++.+.+....+.+|++++++++.   .+..++++||+.|+.++
T Consensus         1 ~~f~s~---dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g---~e~al~~~sG~~a~~~~   74 (392)
T PLN03227          1 LNFATH---DFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLG---TESAILYSDGASTTSST   74 (392)
T ss_pred             CCCcCc---CccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhC---CCcEEEecCcHHHHHHH
Confidence            578777   88998 6999999999999874332   23334456688999999999983   35789999999999988


Q ss_pred             HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250          179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN  258 (514)
Q Consensus       179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (514)
                      +....        ...+.|++-+ .-|+++..++.+++....            .                  +.+++.+
T Consensus        75 i~~l~--------~~GD~Vl~~~-~~h~s~~~~~~l~~~~~~------------~------------------~~~~d~~  115 (392)
T PLN03227         75 VAAFA--------KRGDLLVVDR-GVNEALLVGVSLSRANVR------------W------------------FRHNDMK  115 (392)
T ss_pred             HHHhC--------CCCCEEEEec-cccHHHHHHHHHcCCeEE------------E------------------eCCCCHH
Confidence            87653        2334555544 445554443333321100            0                  0011123


Q ss_pred             HHHHHHHHhC----------CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc--Cccccccccee
Q 010250          259 NLEDLILKEG----------PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC--AFGRLGTMFGC  326 (514)
Q Consensus       259 ~le~li~~~~----------~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t--G~gr~G~~~~~  326 (514)
                      ++++.+....          ..++..|++||+++++|.++|    |++|+++|++||+++|+||+|+  .+|++|. |..
T Consensus       116 ~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~----l~~i~~l~~~~g~~livDe~~~~g~~g~~G~-g~~  190 (392)
T PLN03227        116 DLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP----LKELVALKEEFHYRLILDESFSFGTLGKSGR-GSL  190 (392)
T ss_pred             HHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC----HHHHHHHHHHcCCEEEEECcccccccCCCCC-cHH
Confidence            4444332211          135689999999999999988    9999999999999999999997  3345554 678


Q ss_pred             cccCCCC----chhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCc--HHHHHHHHHHHHH-Hhh
Q 010250          327 DKYSIKP----DLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH--PVSCAVAIEALKI-YKE  397 (514)
Q Consensus       327 ~~~gv~p----Div~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~--pl~~aaa~aal~~-~~~  397 (514)
                      +++|+.|    |++++|  |+++   ...|++++++++++.+..       ..+++||+++  |+.++++.++++. +++
T Consensus       191 ~~~g~~p~~~~Div~~slsk~~g---~~gg~v~~~~~~~~~~~~-------~~~~~~~~~~~~p~~~~aa~~al~~~~~~  260 (392)
T PLN03227        191 EHAGLKPMVHAEIVTFSLENAFG---SVGGMTVGSEEVVDHQRL-------SGSGYCFSASAPPFLAKADATATAGELAG  260 (392)
T ss_pred             HHcCCCCCCCceEEEeechhhhh---ccCcEEecCHHHHHHHHH-------hCcCccccCCCCHHHHHHHHHHHHHHhcC
Confidence            9999999    998766  5443   345667789998887752       2456788776  8888888877754 455


Q ss_pred             ccHHHHHHHHHHHHHhhhhhccCCCceeEEEee--------eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEE
Q 010250          398 RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT--------GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV  469 (514)
Q Consensus       398 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~--------g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~  469 (514)
                      +++.+++++++++|+++|++ .+++.+.++||.        |+++++++.+..... +. ........+.+.|+++|+++
T Consensus       261 ~~~~~~l~~~~~~l~~~L~~-~~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~-~~-~~~~~~~~~~~~~~~~Gi~~  337 (392)
T PLN03227        261 PQLLNRLHDSIANLYSTLTN-SSHPYALKLRNRLVITSDPISPIIYLRLSDQEATR-RT-DETLILDQIAHHSLSEGVAV  337 (392)
T ss_pred             HHHHHHHHHHHHHHHHHHHh-cCCccccccccccccCCCCCCCEEEEEeCCHHHhh-hh-hhhhHHHHHHHHHHHCCCEE
Confidence            67899999999999999987 356777777763        557889886532211 01 11113457889999999998


Q ss_pred             EeeC------------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250          470 RVSG------------DNIMMSPPFIMSPEEVDELISKYGKALKATEERV  507 (514)
Q Consensus       470 ~~~g------------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~  507 (514)
                      .+.+            ..||++....+|+||||+++++|+++++++.-++
T Consensus       338 ~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~~~~~l~~~~~~~~~~~  387 (392)
T PLN03227        338 VSTGGHVKKFLQLVPPPCLRVVANASHTREDIDKLLTVLGEAVEAILCKI  387 (392)
T ss_pred             EecccccCCcCCCCCCceEEEEecCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            6422            2467777778899999999999999998875443

>PLN02955 8-amino-7-oxononanoate synthase

Probab=100.00  E-value=4.3e-32  Score=278.26  Aligned_cols=338  Identities=18%  Similarity=0.144  Sum_probs=253.1

Q ss_pred             CCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHH
Q 010250           99 GKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEA  174 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA  174 (514)
                      ++++|||.|+   ++||. +||+|++++.+++++++..   ++...++++.+.+|+++|++++   +.+.+++++||+.|
T Consensus       101 ~r~~l~FsSn---dYLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~---g~e~all~sSGy~A  174 (476)
T PLN02955        101 FKKLLLFSGN---DYLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLK---KKEDCLVCPTGFAA  174 (476)
T ss_pred             CceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHH---CCCcEEEECChHHH
Confidence            5799999998   88998 6999999999999886543   4466778889999999999998   56789999999999


Q ss_pred             HHHHHHHHHHHHhh---cC--CCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCCh
Q 010250          175 NDTQVKLVWYYNNA---LG--RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE  249 (514)
Q Consensus       175 ~~~Alk~a~~~~~~---~~--~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (514)
                      |.+++.........   ..  ..+++.+|+.+...|.+...++.++....-   .    . +                  
T Consensus       175 N~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~---a----~-~------------------  228 (476)
T PLN02955        175 NMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGN---V----E-V------------------  228 (476)
T ss_pred             HHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCC---c----e-E------------------
Confidence            99999765210000   00  024567889999999998777765532100   0    0 0                  


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--cceec
Q 010250          250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MFGCD  327 (514)
Q Consensus       250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--~~~~~  327 (514)
                      ..|.|+|+++|++++++.. ++.+.|++|+++++.|++.|    |++|+++|++||++||+||+|+ +|+.|+  .+..+
T Consensus       229 ~~f~HND~~~Le~~L~~~~-~~~~~Vv~EgV~SmdGdiap----L~eL~~L~~~~ga~LiVDEAH~-~Gv~G~~G~G~~e  302 (476)
T PLN02955        229 FVYRHCDMYHLNSLLSSCK-MKRKVVVTDSLFSMDGDFAP----MEELSQLRKKYGFLLVIDDAHG-TFVCGENGGGVAE  302 (476)
T ss_pred             EEeCCCCHHHHHHHHHhCC-CCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCcEEEEccccc-CceecCCCCcHHH
Confidence            0144667899999987654 35678999999999999998    9999999999999999999997 667776  55678


Q ss_pred             ccCCCCch----hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc-cHHH
Q 010250          328 KYSIKPDL----VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER-NIVE  402 (514)
Q Consensus       328 ~~gv~pDi----v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~-~~~~  402 (514)
                      ++|+.+|+    .||||++|.   ..|++++++++++.+....   +.+  .++.+.+|..+++++++++++..+ ...+
T Consensus       303 ~~g~~~di~ii~~TLsKA~G~---~GGfi~gs~~~~~~l~~~~---~~~--ifStalpp~~aaa~laal~l~~~~~~~r~  374 (476)
T PLN02955        303 EFNCEADVDLCVGTLSKAAGC---HGGFIACSKKWKQLIQSRG---RSF--IFSTAIPVPMAAAAYAAVVVARKEKWRRK  374 (476)
T ss_pred             HhCCCCCCcEEEEeCccchhc---cCceeecHHHHHHHHHHhC---CCC--eecccccHHHHHHHHHHHHHHhcCHHHHH
Confidence            89988776    589999983   2356889999999987532   122  233355667778888999988543 4667


Q ss_pred             HHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------C-C
Q 010250          403 QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------G-D  474 (514)
Q Consensus       403 ~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g-~  474 (514)
                      +++++.++|++.+ .+   +.      ...++.+.+.++.           .+..+.++|+++|+++.+.       + .
T Consensus       375 ~L~~n~~~fr~~~-G~---~~------~sPI~pI~ig~~~-----------~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~  433 (476)
T PLN02955        375 AIWERVKEFKALS-GV---DI------SSPIISLVVGNQE-----------KALKASRYLLKSGFHVMAIRPPTVPPNSC  433 (476)
T ss_pred             HHHHHHHHHHHhc-CC---CC------CCCEEEEEeCCHH-----------HHHHHHHHHHHCCCEEEEECCCCCCCCCc
Confidence            8888888888732 22   21      2456666665432           3556889999999998732       3 3


Q ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          475 NIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       475 ~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      .+||+....+|++||++++++|.++.+.+
T Consensus       434 rLRi~lsA~Ht~edId~lv~~L~~~~~~~  462 (476)
T PLN02955        434 RLRVTLSAAHTTEDVKKLITALSSCLDFD  462 (476)
T ss_pred             eEEEeeCCCCCHHHHHHHHHHHHHHHhhh
Confidence            59999999999999999999998886544

>PRK07179 hypothetical protein; Provisional

Probab=100.00  E-value=2.3e-31  Score=276.56  Aligned_cols=337  Identities=16%  Similarity=0.218  Sum_probs=240.6

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc---cccccccCCchHHHHHHHHHHhcC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF---YHSFWNRTTKPSLDLAKELLEMFT  158 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~---~~~~~~~~~~~~~ela~~L~~~~~  158 (514)
                      .+++..+++|.+++|.+||.||||.          +||+|++++.+++++...   .++.+....+...+|+++|++++ 
T Consensus        44 ~~~~~~~~~g~~~~~~~~~~YL~l~----------~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~-  112 (407)
T PRK07179         44 KHLVLGKTPGPDAIILQSNDYLNLS----------GHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT-  112 (407)
T ss_pred             ceEEeecCCCCcEEEeecCCccCCC----------CCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh-
Confidence            7889999999999999999999986          689999999999987522   12333333457789999999997 


Q ss_pred             cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC
Q 010250          159 ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH  238 (514)
Q Consensus       159 ~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  238 (514)
                        +.++++|++||++||+.+++.+.        ..++.|++ +...|.+........+...              .+   
T Consensus       113 --g~~~~~~~~sG~~An~~~l~~l~--------~~g~~v~~-~~~~h~s~~~~~~~~g~~~--------------~~---  164 (407)
T PRK07179        113 --GFESCLLCQSGWAANVGLLQTIA--------DPNTPVYI-DFFAHMSLWEGVRAAGAQA--------------HP---  164 (407)
T ss_pred             --CCCcEEEECCHHHHHHHHHHHhC--------CCCCEEEE-ECCcCHHHHHHHHHCCCeE--------------EE---
Confidence              34678999999999999998763        12234444 5555544322222112110              00   


Q ss_pred             cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc
Q 010250          239 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG  318 (514)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g  318 (514)
                                   +.++++++|++++.+   .++++|++|++++++|.+.|    +++|+++|++||++||+||+|+ +|
T Consensus       165 -------------~~~~d~~~l~~~l~~---~~~~lV~v~~v~n~tG~i~p----l~~I~~l~~~~~~~livDea~~-~g  223 (407)
T PRK07179        165 -------------FRHNDVDHLRRQIER---HGPGIIVVDSVYSTTGTIAP----LADIVDIAEEFGCVLVVDESHS-LG  223 (407)
T ss_pred             -------------ecCCCHHHHHHHHHh---cCCeEEEECCCCCCCCcccc----HHHHHHHHHHcCCEEEEECccc-cc
Confidence                         111235778887753   24678999999999999988    9999999999999999999998 44


Q ss_pred             c---ccccceecccCCC--Cchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHH
Q 010250          319 R---LGTMFGCDKYSIK--PDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEA  391 (514)
Q Consensus       319 r---~G~~~~~~~~gv~--pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aa  391 (514)
                      +   +|.. .+..+++.  +|++  +++|++++   ++|++++++++++.+.....   +..+++|+.  +..++++.++
T Consensus       224 ~~g~~g~g-~~~~~~~~~~vdi~~~S~sK~~g~---~~G~l~~~~~~~~~~~~~~~---~~~~~~t~~--~~~~aa~~aa  294 (407)
T PRK07179        224 THGPQGAG-LVAELGLTSRVHFITASLAKAFAG---RAGIITCPRELAEYVPFVSY---PAIFSSTLL--PHEIAGLEAT  294 (407)
T ss_pred             CcCCCCCc-hHHhcCCCCCCCEEEeechHhhhc---cCeEEEeCHHHHHHHHHhCc---CeeeCCCCC--HHHHHHHHHH
Confidence            4   4433 24556664  4775  47899974   58999999998887753211   112334443  5555666777


Q ss_pred             HHHHhhc-cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250          392 LKIYKER-NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR  470 (514)
Q Consensus       392 l~~~~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~  470 (514)
                      ++.+++. +..++++++++++++.|+++ ...    +.+.+.++.+.+....           ....+.+.|.++||++.
T Consensus       295 l~~~~~~~~~~~~l~~~~~~l~~~L~~~-g~~----v~~~~~i~~l~~~~~~-----------~~~~~~~~L~~~GI~~~  358 (407)
T PRK07179        295 LEVIESADDRRARLHANARFLREGLSEL-GYN----IRSESQIIALETGSER-----------NTEVLRDALEERNVFGA  358 (407)
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCC----CCCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCceEe
Confidence            8877654 47889999999999999886 322    2345778887764311           13457788999999743


Q ss_pred             ----ee----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          471 ----VS----GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       471 ----~~----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                          +.    .+.|||+++..+|++||++++++|++++++.
T Consensus       359 ~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~  399 (407)
T PRK07179        359 VFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV  399 (407)
T ss_pred             eecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence                22    2579999999999999999999999887753

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=100.00  E-value=6e-31  Score=271.58  Aligned_cols=347  Identities=16%  Similarity=0.225  Sum_probs=243.5

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhc
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMF  157 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~  157 (514)
                      .|.++++++|++|| .||++||||.++   .++|| ++|.+++++.+++++....   +..+.+..+...++++++++.+
T Consensus        16 ~~~~~~~~~g~~~~-~~g~~~id~~~~---~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~   91 (385)
T TIGR01825        16 SIRVLESAQGPRVR-VNGKEVINLSSN---NYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFK   91 (385)
T ss_pred             cccccccCCCceEE-ECCceEEEeecc---CccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHh
Confidence            57889999999999 999999999876   66899 8999999999998764321   2233456678889999999886


Q ss_pred             CcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC
Q 010250          158 TASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP  237 (514)
Q Consensus       158 ~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  237 (514)
                      +   .+..++.+||++|+..+++.++        .+++.|+ .+..+|+....++...+.+...            ++  
T Consensus        92 g---~~~~i~~~sG~~a~~~a~~~~~--------~~gd~vi-~~~~~~~~~~~~~~~~g~~~~~------------~~--  145 (385)
T TIGR01825        92 K---TEAALVFQSGFNTNQGVLSALL--------RKGDIVL-SDELNHASIIDGLRLTKATKKI------------YK--  145 (385)
T ss_pred             C---CCcEEEECcHHHHHHHHHHHhC--------CCCCEEE-EEccccHHHHHHHHhcCCceEE------------eC--
Confidence            4   2456778889999998888663        2234444 5556677654443333321110            00  


Q ss_pred             CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC-
Q 010250          238 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA-  316 (514)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG-  316 (514)
                                      +.+.+++++.+.+....++++|+++++++.+|.+.+    +++|.++|++||+++|+||+|+. 
T Consensus       146 ----------------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~----~~~i~~l~~~~~~~li~De~~~~~  205 (385)
T TIGR01825       146 ----------------HADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP----LPEIVELAERYGAVTYVDDAHGSG  205 (385)
T ss_pred             ----------------CCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccC----HHHHHHHHHHhCCEEEEECccccc
Confidence                            011466777665443346789999999999998877    89999999999999999999963 


Q ss_pred             -cccccccceecccCCCCch----hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHH
Q 010250          317 -FGRLGTMFGCDKYSIKPDL----VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEA  391 (514)
Q Consensus       317 -~gr~G~~~~~~~~gv~pDi----v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aa  391 (514)
                       +++.|. +...++++.+|.    .+|||++++   +.|++++++++++.+.....   .+  ..+...+|..++++.++
T Consensus       206 ~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~---~gG~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~a~~~a  276 (385)
T TIGR01825       206 VMGEAGR-GTVHHFGLEDKVDIQVGTLSKAIGV---VGGYAAGHKELIEYLKNRAR---PF--LFSTAQPPAVVAALAAA  276 (385)
T ss_pred             CcCCCCC-ccHhhcCCCcCCcEEEEeccHHhhc---CCCEEecCHHHHHHHHHhCc---cc--cccCCCCHHHHHHHHHH
Confidence             344443 233445555553    589999964   44788889999888864210   11  11223567888888899


Q ss_pred             HHHHhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250          392 LKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR  470 (514)
Q Consensus       392 l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~  470 (514)
                      ++.+.+ .+..+++.++++++.+.|+++ ..+..   ...+.++.+.+....           ....+++.|+++||++.
T Consensus       277 l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~---~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~gi~v~  341 (385)
T TIGR01825       277 VDELQRSPELMERLWDNTRFFKAGLGKL-GYDTG---GSETPITPVVIGDEK-----------AAQEFSRRLFDEGIFAQ  341 (385)
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC---CCCCCEEEEEECCHH-----------HHHHHHHHHHHCCcEEc
Confidence            987654 357888899999999999876 22222   122334454442110           13458889999999885


Q ss_pred             e-------eC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          471 V-------SG-DNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       471 ~-------~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      .       .+ ..||++|++.+++++|++++++|++++++
T Consensus       342 ~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~  381 (385)
T TIGR01825       342 SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKE  381 (385)
T ss_pred             ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence            2       12 46999999999999999999999998754

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=99.98  E-value=1.5e-30  Score=268.48  Aligned_cols=341  Identities=21%  Similarity=0.270  Sum_probs=243.1

Q ss_pred             EEEeeeCcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCccc---cccccCCchHHHHHHHHHHhcCcC
Q 010250           85 VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYH---SFWNRTTKPSLDLAKELLEMFTAS  160 (514)
Q Consensus        85 ~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~~---~~~~~~~~~~~ela~~L~~~~~~~  160 (514)
                      ++++++|+++|+ +|++||||.++   .++|| ++|+|++++.++++......   ....++.+...++++++++++.  
T Consensus        25 ~~~~~~g~~~~~-~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~--   98 (385)
T PRK05958         25 PREGGAGRWLVV-DGRRMLNFASN---DYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG--   98 (385)
T ss_pred             ccccCCCceeEe-CCceEEEeeCC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC--
Confidence            589999999997 99999999987   56898 78999999999997643211   1222355677899999999874  


Q ss_pred             CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcc
Q 010250          161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                       .++++++++|++++..+++...        .+++.|+ +...+|+....+..+.+.+..            .++.+   
T Consensus        99 -~~~~i~~~~g~~~~~~~l~~~~--------~~gd~V~-~~~~~~~~~~~~~~~~g~~~~------------~~~~~---  153 (385)
T PRK05958         99 -AERALLFSSGYAANLAVLTALA--------GKGDLIV-SDKLNHASLIDGARLSRARVR------------RYPHN---  153 (385)
T ss_pred             -CCcEEEECcHHHHHHHHHHHhC--------CCCCEEE-EeCccCHHHHHHHHhcCCceE------------EeCCC---
Confidence             3577888899999998876542        2234455 455677766554444332211            01110   


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-C-cc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-A-FG  318 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G-~g  318 (514)
                                     +.+++++++... ++++++++++++++.+|.+.+    +++|.++|++||+++|+||+|+ | ++
T Consensus       154 ---------------d~~~l~~~i~~~-~~~~~lvi~~~~~~~~G~~~~----l~~i~~ia~~~~~~li~De~~~~g~~~  213 (385)
T PRK05958        154 ---------------DVDALEALLAKW-RAGRALIVTESVFSMDGDLAP----LAELVALARRHGAWLLVDEAHGTGVLG  213 (385)
T ss_pred             ---------------CHHHHHHHHHhc-cCCCeEEEEEecccCCCCcCC----HHHHHHHHHHhCCEEEEECcccccccC
Confidence                           146778777542 224789999999999998766    9999999999999999999996 3 34


Q ss_pred             cccccceecccC--CCCc---hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHH
Q 010250          319 RLGTMFGCDKYS--IKPD---LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK  393 (514)
Q Consensus       319 r~G~~~~~~~~g--v~pD---iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~  393 (514)
                      +.|..+ ....+  ..+|   +.++||+++.   +.|++++++++++.+....   .  .+..+.+.+|++++++.++|+
T Consensus       214 ~~g~~~-~~~~~~~~~~~~i~~~s~sK~~~~---~Gg~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~aa~~aal~  284 (385)
T PRK05958        214 PQGRGL-AAEAGLAGEPDVILVGTLGKALGS---SGAAVLGSETLIDYLINRA---R--PFIFTTALPPAQAAAARAALR  284 (385)
T ss_pred             CCCCch-HHhhCCCCCCceEEEEechhhccc---CCcEEEcCHHHHHHHHHhC---c--cceecCCCCHHHHHHHHHHHH
Confidence            444332 22222  3456   4578999964   3378888999888775321   1  123345678889988999999


Q ss_pred             HHhhc-cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee
Q 010250          394 IYKER-NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS  472 (514)
Q Consensus       394 ~~~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~  472 (514)
                      .+++. ++.+++.++++++.+.|+++ ...+   +.+.|.++.+.+.+..           ....+.+.|.++||.+.+.
T Consensus       285 ~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~---~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~gI~v~~~  349 (385)
T PRK05958        285 ILRREPERRERLAALIARLRAGLRAL-GFQL---MDSQSAIQPLIVGDNE-----------RALALAAALQEQGFWVGAI  349 (385)
T ss_pred             HHhcCHHHHHHHHHHHHHHHHHHHHc-CCCc---CCCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCceEecc
Confidence            87653 67889999999999999876 2222   2346777777764211           2456888999999999752


Q ss_pred             --------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          473 --------GDNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       473 --------g~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                              .+.+|++|+..++++|+++++++|++++
T Consensus       350 ~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~  385 (385)
T PRK05958        350 RPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL  385 (385)
T ss_pred             cCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence                    2479999999999999999999998753

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=99.97  E-value=5.4e-30  Score=237.15  Aligned_cols=343  Identities=19%  Similarity=0.270  Sum_probs=256.3

Q ss_pred             CeEEEeeeCcEEEeCCC--CEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCc---cccccccCCchHHHHHHHHHHh
Q 010250           83 PLVIEKSEGSYVYDVNG--KKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPF---YHSFWNRTTKPSLDLAKELLEM  156 (514)
Q Consensus        83 p~~~~~~~G~~~~d~dG--~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~---~~~~~~~~~~~~~ela~~L~~~  156 (514)
                      ..++++.+|..+. ++|  +++|+|+++   ++||. +||+|.+|..++++.++.   +.+|..++.+.+..|+.+|+++
T Consensus        49 erVi~s~q~p~i~-v~G~~k~ilnFcaN---nYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqf  124 (417)
T KOG1359|consen   49 ERVITSRQGPTIQ-VKGSDKKILNFCAN---NYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQF  124 (417)
T ss_pred             eeEEeecccceEE-Eeccccceeeeccc---ccccccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHH
Confidence            3578888998877 677  699999998   89998 699999999999988543   3457778899999999999998


Q ss_pred             cCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC
Q 010250          157 FTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC  236 (514)
Q Consensus       157 ~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~  236 (514)
                      .   +.+..++++|+..||..++....        + .++-|+.+.-.|.+.+.++.+.                     
T Consensus       125 h---~rED~ilypscfdANag~feail--------~-pedAvfSDeLNhASIIdGirLc---------------------  171 (417)
T KOG1359|consen  125 H---GREDTILYPSCFDANAGAFEAIL--------T-PEDAVFSDELNHASIIDGIRLC---------------------  171 (417)
T ss_pred             h---CCCceEEeccccccchHHHHHhc--------C-hhhhhhccccccchhhhhhHHH---------------------
Confidence            6   56789999999999999987763        2 2344555666777665544332                     


Q ss_pred             CCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-
Q 010250          237 PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-  315 (514)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-  315 (514)
                                   +.+.|.++-+++..+.+..+.+...|+.+.+.++.|++.|    |++|.+|++|||.||++||.|. 
T Consensus       172 -------------kry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP----l~ei~~La~kYgaLlfiDecHaT  234 (417)
T KOG1359|consen  172 -------------KRYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP----LEEISQLAKKYGALLFIDECHAT  234 (417)
T ss_pred             -------------hhhccchhHHHHHHHHHhhhheEEEEEecceeccCCCccc----HHHHHHHHHhcCcEEEEeecccc
Confidence                         1244555677776666544567899999999999999999    9999999999999999999987 


Q ss_pred             Cc-ccccccceecccCCC--Cchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHH
Q 010250          316 AF-GRLGTMFGCDKYSIK--PDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIE  390 (514)
Q Consensus       316 G~-gr~G~~~~~~~~gv~--pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~a  390 (514)
                      || |.+| .+.-+.+|+.  +|++  |+||++||  ..-|++.+++.+++.+++++   +++..  +.+..|.....+.+
T Consensus       235 gf~G~tG-rGt~E~~~vm~~vdiinsTLgKAlGg--a~GGyttgp~~li~llrqr~---RpylF--SnslppavV~~a~k  306 (417)
T KOG1359|consen  235 GFFGETG-RGTAEEFGVMGDVDIINSTLGKALGG--ASGGYTTGPKPLISLLRQRS---RPYLF--SNSLPPAVVGMAAK  306 (417)
T ss_pred             eeecCCC-CChHHHhCCCCcceehhhhhhhhhcC--CCCCCccCChhHHHHHHhcC---Cceee--cCCCChhhhhhhHH
Confidence            44 5555 3455778864  6766  79999997  34578889999999998754   33333  33444555556667


Q ss_pred             HHHHH-hhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEE
Q 010250          391 ALKIY-KERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV  469 (514)
Q Consensus       391 al~~~-~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~  469 (514)
                      +++.+ ....+..+.+.+.++|++.++.. ...+.+   ...++..+.+.+.           .++..++.+|+++|+++
T Consensus       307 a~dllm~s~~~i~~~~a~~qrfr~~me~a-GftIsg---~~hPI~pv~lGda-----------~lA~~~ad~lLk~Gi~V  371 (417)
T KOG1359|consen  307 AYDLLMVSSKEIQSRQANTQRFREFMEAA-GFTISG---ASHPICPVMLGDA-----------RLASKMADELLKRGIYV  371 (417)
T ss_pred             HHHHHHhhHHHHHHHHHHHHHHHHHHHhc-CceecC---CCCCccceecccH-----------HHHHHHHHHHHhcCceE
Confidence            77754 44567888999999999988753 111110   0113344444332           35777899999999998


Q ss_pred             E-------eeCC-EEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          470 R-------VSGD-NIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       470 ~-------~~g~-~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      .       |.|. .||+..+..+|+||||++++++.++.+.
T Consensus       372 igfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~  412 (417)
T KOG1359|consen  372 IGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRF  412 (417)
T ss_pred             EeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHh
Confidence            6       3344 4999999999999999999999888753

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=99.97  E-value=1.5e-29  Score=263.09  Aligned_cols=335  Identities=19%  Similarity=0.245  Sum_probs=236.3

Q ss_pred             CCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250           98 NGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE  173 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse  173 (514)
                      +|+++++|.|+   ++||. +||+|++|+.++++++...   ++.+.+..+.+.+|+++|+++++   .+..++++||++
T Consensus        44 ~~~~~~~~~sn---~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g---~~~~i~~~sG~~  117 (410)
T PRK13392         44 GPRRVTIWCSN---DYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG---KESALLFTSGYV  117 (410)
T ss_pred             CCceEEEEECC---CccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC---CCCEEEECcHHH
Confidence            57899999997   67777 6999999999999876432   12223345568899999999984   356888889999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS  253 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (514)
                      |++.+++....     ..+  ..+|+.+..+|++...++..+|.....            +  +                
T Consensus       118 a~~~~i~~l~~-----~~~--g~~vi~~~~~h~s~~~~~~~~g~~~~~------------~--~----------------  160 (410)
T PRK13392        118 SNDAALSTLGK-----LLP--GCVILSDALNHASMIEGIRRSGAEKQV------------F--R----------------  160 (410)
T ss_pred             HHHHHHHHHhc-----CCC--CCEEEEehhhhHHHHHHHHHcCCeEEE------------E--e----------------
Confidence            99999985421     112  246666777898875555444432110            0  0                


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-Cc-ccccccceecccCC
Q 010250          254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AF-GRLGTMFGCDKYSI  331 (514)
Q Consensus       254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~-gr~G~~~~~~~~gv  331 (514)
                      +++.+++++.+.+...+++++|++|++++++|.+.+    +++|.++|++||+++|+||+|+ |+ |+.|... .++.++
T Consensus       161 ~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~-~~~~~~  235 (410)
T PRK13392        161 HNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAP----IEAICDLADRYNALTYVDEVHAVGLYGARGGGI-AERDGL  235 (410)
T ss_pred             CCCHHHHHHHHHhccCCCCEEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCccccCcCCCCCch-hhhccC
Confidence            001345666665443356789999999999999987    9999999999999999999998 44 5555433 344454


Q ss_pred             --CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc-cHHHHHHH
Q 010250          332 --KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER-NIVEQVNK  406 (514)
Q Consensus       332 --~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~-~~~~~~~~  406 (514)
                        .+|++  +|||+++..   .|++++++++++.+.....     ...++.+.+|++++++.++|+.+++. ...+++++
T Consensus       236 ~~~~div~~tlsK~~g~~---GG~~~~~~~~~~~l~~~~~-----~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~  307 (410)
T PRK13392        236 MDRIDMIQGTLAKAFGCL---GGYIAASADLIDFVRSFAP-----GFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQD  307 (410)
T ss_pred             CCCCcEEEEEChHhhhcc---cchhhcCHHHHHHHHHhCc-----chhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence              46776  899998752   2677889999887764211     11235566788899999999977643 34567888


Q ss_pred             HHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------C-CEEE
Q 010250          407 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------G-DNIM  477 (514)
Q Consensus       407 ~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g-~~iR  477 (514)
                      +.+++++.|+++ ..+..   .+.+.++.+.+.+..           ....+.+.|+ ++||++.+.       + ..||
T Consensus       308 ~~~~l~~~L~~~-g~~~~---~~~~~~~~i~~~~~~-----------~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lR  372 (410)
T PRK13392        308 RVAALKAKLNAN-GIPVM---PSPSHIVPVMVGDPT-----------LCKAISDRLMSEHGIYIQPINYPTVPRGTERLR  372 (410)
T ss_pred             HHHHHHHHHHHc-CCCCC---CCCCCEEEEEeCCHH-----------HHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEE
Confidence            889999999875 22221   234555555443210           1346778886 689999853       2 4699


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      +++++.+|++|+++++++|+++++++
T Consensus       373 is~~~~~t~edid~l~~aL~~~~~~~  398 (410)
T PRK13392        373 ITPTPLHDDEDIDALVAALVAIWDRL  398 (410)
T ss_pred             EEECCCCCHHHHHHHHHHHHHHHHHc
Confidence            99999999999999999999887654

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=99.97  E-value=7.9e-29  Score=256.51  Aligned_cols=349  Identities=19%  Similarity=0.264  Sum_probs=243.1

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCC-CHHHHHHHHHHHhcCCc-c--ccccccCCchHHHHHHHHHHhc
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGS-EPRLVAAATAQLNTLPF-Y--HSFWNRTTKPSLDLAKELLEMF  157 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~-~p~v~~A~~~~l~~~~~-~--~~~~~~~~~~~~ela~~L~~~~  157 (514)
                      .|..+.++.|.++++.+|++||||.++   .+||++ +|++++++.+++.+... +  +.+..+..+...++++.|++++
T Consensus        20 ~~~~~~~~~~~~~~~~~g~~~i~~~~~---~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~   96 (393)
T TIGR01822        20 SERIITSPQGADIRVADGREVLNFCAN---NYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFL   96 (393)
T ss_pred             cccccccCCCceEEecCCceEEEeeCC---CccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh
Confidence            456788899999999999999999999   789996 99999999999976322 1  2233344667789999999998


Q ss_pred             CcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC
Q 010250          158 TASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP  237 (514)
Q Consensus       158 ~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  237 (514)
                      +   .+.+++++||++|+..++....        .+.+.|++.+..|+... ..+.+.+.....                
T Consensus        97 g---~~~~ii~~~~~~a~~~~~~~l~--------~~gd~vi~~~~~~~s~~-~~~~~~~~~~~~----------------  148 (393)
T TIGR01822        97 G---TEDTILYASCFDANGGLFETLL--------GAEDAIISDALNHASII-DGVRLCKAKRYR----------------  148 (393)
T ss_pred             C---CCcEEEECchHHHHHHHHHHhC--------CCCCEEEEeccccHHHH-HHHHhcCCceEE----------------
Confidence            4   3567888999999998776542        23456777666555433 222222211100                


Q ss_pred             CcccCCCCCCChhHHHHHHHHHHHHHHHHhCC--CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc
Q 010250          238 HYWRYAHPGETEEEYSTRLANNLEDLILKEGP--ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC  315 (514)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~--~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t  315 (514)
                                    +.+++.+++++.+.+...  .++.+|+++++++++|.+.|    +++|.++|++||++||+||+|.
T Consensus       149 --------------~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~----l~~i~~la~~~~~~li~De~~~  210 (393)
T TIGR01822       149 --------------YANNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP----LDEICDLADKYDALVMVDECHA  210 (393)
T ss_pred             --------------eCCCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC----HHHHHHHHHHcCCEEEEECCcc
Confidence                          001225777777764321  26789999999999999877    9999999999999999999995


Q ss_pred             Cccccccc--ceecccCC--CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHH
Q 010250          316 AFGRLGTM--FGCDKYSI--KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAI  389 (514)
Q Consensus       316 G~gr~G~~--~~~~~~gv--~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~  389 (514)
                       +|..|..  +..+..++  .+|++  +++|+|+|  +++|++++++++++.+....   ..+.  .+.+.++..++++.
T Consensus       211 -~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g--~r~G~~~~~~~~~~~l~~~~---~~~~--~~~~~~~~~~~a~~  282 (393)
T TIGR01822       211 -TGFLGPTGRGSHELCGVMGRVDIITGTLGKALGG--ASGGFTTARKEVVELLRQRS---RPYL--FSNSLPPAVVGASI  282 (393)
T ss_pred             -ccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhC--CCcEEEEeCHHHHHHHHHhC---ccce--ecCCCCHHHHHHHH
Confidence             4443321  12233444  35666  68999986  68999999999998886421   1111  12233566677788


Q ss_pred             HHHHHHhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcE
Q 010250          390 EALKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGML  468 (514)
Q Consensus       390 aal~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~  468 (514)
                      ++++.+++ ++..++++++.+++++.|+++ ...+.   .+.+.++.+.+.+..           ....+...|.++||+
T Consensus       283 ~al~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~---~~~~~~~~i~~~~~~-----------~~~~l~~~L~~~gI~  347 (393)
T TIGR01822       283 KVLEMLEASNELRDRLWANTRYFRERMEAA-GFDIK---PADHPIIPVMLYDAV-----------LAQRFARRLLEEGIY  347 (393)
T ss_pred             HHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCCC---CCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCee
Confidence            88887754 457889999999999999875 22221   123445555443211           245688889999998


Q ss_pred             EEee-------C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          469 VRVS-------G-DNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       469 ~~~~-------g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +...       + ..||+++++.+|++||++++++|++++++
T Consensus       348 v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~  389 (393)
T TIGR01822       348 VTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGRE  389 (393)
T ss_pred             EeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence            8631       2 35999999999999999999999988754

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=99.97  E-value=3.3e-28  Score=252.09  Aligned_cols=348  Identities=20%  Similarity=0.263  Sum_probs=240.1

Q ss_pred             eEEEeeeCcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCccc---cccccCCchHHHHHHHHHHhcCc
Q 010250           84 LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYH---SFWNRTTKPSLDLAKELLEMFTA  159 (514)
Q Consensus        84 ~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~~---~~~~~~~~~~~ela~~L~~~~~~  159 (514)
                      ..+++++|.++||.+|+.||||.++   .++|| .+|++.+++.+++++..+.+   .+..+..+...++++.++++++ 
T Consensus        26 ~~~~~~~~~~~~~~~g~~~i~l~~~---~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g-  101 (397)
T PRK06939         26 RVITSPQGADITVADGKEVINFCAN---NYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLG-  101 (397)
T ss_pred             ccccCCCCceEEecCCCeEEEeecc---CccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhC-
Confidence            4578999999999999999999886   66898 69999999999987643221   2233456777889999999874 


Q ss_pred             CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250          160 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY  239 (514)
Q Consensus       160 ~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  239 (514)
                        .++.+++++|++|+..+++...        ..++.||+.++.|.+...... ..+....            .++.   
T Consensus       102 --~~~~i~~tsG~~a~~~~~~~l~--------~~gd~vi~~~~~~~~~~~~~~-~~~~~~~------------~~~~---  155 (397)
T PRK06939        102 --TEDAILYSSCFDANGGLFETLL--------GKEDAIISDALNHASIIDGVR-LCKAKRY------------RYAN---  155 (397)
T ss_pred             --CCcEEEEcChHHHHHHHHHHhC--------CCCCEEEEEhhhhHHHHHHHH-hcCCceE------------EeCC---
Confidence              2345666668999999887653        334678888777765432221 1111110            0000   


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-C
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-A  316 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G  316 (514)
                                     .+.+++++.+....  ..++++|+++++++..|.+.+    +++|.++|++||+++|+||+|+ |
T Consensus       156 ---------------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~----~~~l~~la~~~~~~li~De~~~~g  216 (397)
T PRK06939        156 ---------------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP----LPEICDLADKYDALVMVDDSHAVG  216 (397)
T ss_pred             ---------------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC----HHHHHHHHHHhCCEEEEECccccc
Confidence                           11467777765421  126788999999999898655    9999999999999999999995 4


Q ss_pred             c-ccccccceecccCC--CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHH
Q 010250          317 F-GRLGTMFGCDKYSI--KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEA  391 (514)
Q Consensus       317 ~-gr~G~~~~~~~~gv--~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aa  391 (514)
                      + ++.|. +....+++  .+|++  ++||+++|  +++|++++++++++.+....   ..+.  .+.+.++..++++.++
T Consensus       217 ~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~g--~r~G~v~~~~~~~~~l~~~~---~~~~--~~~~~~~~~~~a~~~a  288 (397)
T PRK06939        217 FVGENGR-GTVEHFGVMDRVDIITGTLGKALGG--ASGGYTAGRKEVIDWLRQRS---RPYL--FSNSLAPAIVAASIKV  288 (397)
T ss_pred             CcCCCCC-CHHHHcCCCCCCcEEEEECHHHhCc--cCceEEEeCHHHHHHHHHhC---cccc--ccCCCCHHHHHHHHHH
Confidence            3 33332 12334455  35677  78999965  58899999999998886421   1111  1223456667778888


Q ss_pred             HHHHhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250          392 LKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR  470 (514)
Q Consensus       392 l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~  470 (514)
                      ++.+.+ +++.++++++.+++++.|+++ ....   ..+.+.++.+.+....           ....+.+.|.++||.+.
T Consensus       289 l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~---~~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~gI~v~  353 (397)
T PRK06939        289 LELLEESDELRDRLWENARYFREGMTAA-GFTL---GPGEHPIIPVMLGDAK-----------LAQEFADRLLEEGVYVI  353 (397)
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCCc---CCCCCCEEEEEECCHH-----------HHHHHHHHHHHCCceEe
Confidence            887754 357788999999999999875 2221   1234555544442210           14568889999999887


Q ss_pred             ee--------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          471 VS--------GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       471 ~~--------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      +.        ...||+++++.+++++|++++++|+++++++
T Consensus       354 ~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~  394 (397)
T PRK06939        354 GFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL  394 (397)
T ss_pred             eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence            42        1469999988999999999999999887653

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.96  E-value=6e-28  Score=247.56  Aligned_cols=328  Identities=20%  Similarity=0.194  Sum_probs=228.8

Q ss_pred             CEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCC-------c---cccccccCCchHHHHHHHHHHhcCcCCCCeEEEe
Q 010250          100 KKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLP-------F---YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFT  168 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~-------~---~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~  168 (514)
                      .+++||.|+   ++||+ .+|++.+++.+++.+..       .   +++...+..+...+++++|+++++   .+.++++
T Consensus         4 ~~~~~~~s~---~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~---~~~~l~~   77 (370)
T PRK05937          4 SLSIDFVTN---DFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHG---APEAFIV   77 (370)
T ss_pred             CceEEeECC---CccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhC---CCeEEEE
Confidence            468999998   89998 59999999999987641       1   223344567889999999999984   3568999


Q ss_pred             CChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCC
Q 010250          169 NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET  248 (514)
Q Consensus       169 ~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (514)
                      +||+.|+...+...         .++.++|+.+..+|+++..++.....  ....                         
T Consensus        78 ~sG~~a~~~~~~~~---------~~~~d~ii~d~~~H~sv~~~~~~~~~--~~~~-------------------------  121 (370)
T PRK05937         78 PSGYMANLGLCAHL---------SSVTDYVLWDEQVHISVVYSLSVISG--WHQS-------------------------  121 (370)
T ss_pred             CChHHHHHHHHHHh---------CCCCCEEEEEhhhhHHHHHHHHHcCC--ceEE-------------------------
Confidence            99999986443322         23467999999999998776654321  0000                         


Q ss_pred             hhHHHHHHHHHHHHHHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-C-cccccccc
Q 010250          249 EEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-A-FGRLGTMF  324 (514)
Q Consensus       249 ~~~~~~~~~~~le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G-~gr~G~~~  324 (514)
                         |.++++++|++++....  +++..+|+++++++++|.+.|    +++|.++|++||+++|+||+|+ | +|+.|..+
T Consensus       122 ---~~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p----l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~  194 (370)
T PRK05937        122 ---FRHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP----LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGF  194 (370)
T ss_pred             ---ecCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCCch
Confidence               11223678888886432  134567889999999999998    9999999999999999999998 3 45555432


Q ss_pred             eecccC---CCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc--c
Q 010250          325 GCDKYS---IKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER--N  399 (514)
Q Consensus       325 ~~~~~g---v~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~--~  399 (514)
                      . ..++   +.+|+.||||+++..+   +++++.+++.+.+....   .+  ..++.+.+|.+++++.++++.+.+.  .
T Consensus       195 ~-~~~~~~~~~~~~~tlsK~~g~~G---~~vl~~~~~~~~~~~~~---~~--~~~s~~~~~~~~~a~~aal~~l~~~~~~  265 (370)
T PRK05937        195 C-HSLGYENFYAVLVTYSKALGSMG---AALLSSSEVKQDLMLNS---PP--LRYSTGLPPHLLISIQVAYDFLSQEGEL  265 (370)
T ss_pred             H-HhhCCCCCcEEEEechhhhhcCc---eEEEcCHHHHHHHHHhC---CC--CeecCCCCHHHHHHHHHHHHHHHhCcHH
Confidence            2 2223   2357789999987622   44667777666554211   11  2234456788888888999988653  3


Q ss_pred             HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----CCE
Q 010250          400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----GDN  475 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----g~~  475 (514)
                      ..++++++.+++++.|....  +        +....+.+...            ....+.+.|.++||.+...    ...
T Consensus       266 ~~~~l~~l~~~l~~~l~~~~--~--------~~~~~i~~~~~------------~~~~~~~~L~~~gi~v~~~~~~~~~~  323 (370)
T PRK05937        266 ARKQLFRLKEYFAQKFSSAA--P--------GCVQPIFLPGI------------SEQELYSKLVETGIRVGVVCFPTGPF  323 (370)
T ss_pred             HHHHHHHHHHHHHHhcCCCC--C--------CCEEEEEeCCh------------hHHHHHHHHHHCCeeEEeeCCCCCCE
Confidence            56777888888877775421  1        11122333321            1345778889999988732    457


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKALKATEERV  507 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~  507 (514)
                      ||++++..+|+||||++++.|+++++++.+++
T Consensus       324 iRis~~~~~t~edid~l~~~L~~~~~~~~~~~  355 (370)
T PRK05937        324 LRVNLHAFNTEDEVDILVSVLATYLEKYQKNV  355 (370)
T ss_pred             EEEEcCCCCCHHHHHHHHHHHHHHHHHhCCCc
Confidence            99999999999999999999999988765443

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=99.96  E-value=3.5e-27  Score=241.00  Aligned_cols=338  Identities=19%  Similarity=0.258  Sum_probs=233.1

Q ss_pred             EEeeeCcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCccc---cccccCCchHHHHHHHHHHhcCcCC
Q 010250           86 IEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYH---SFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        86 ~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~~---~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      +.++.|.++. .+|++||||.+|   ++||+ .+|+|++++.+++++.....   ....+..+...++++.|++++.   
T Consensus         3 ~~~~~~~~~~-~~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---   75 (360)
T TIGR00858         3 LDRGPGPEVV-RDGRRLLNFSSN---DYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG---   75 (360)
T ss_pred             cccCCCCeEE-ECCceEEecccC---CcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---
Confidence            4688999998 799999999998   68996 79999999999997643321   1112344667889999999874   


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      .+..++.++|++++..+++.++        .+++.|++.++. |+.........+.+..            .++.     
T Consensus        76 ~~~~i~~~~G~~~~~~~l~~~~--------~~gd~v~~~~~~-~~~~~~~~~~~g~~~~------------~~~~-----  129 (360)
T TIGR00858        76 TEAALLFSSGYLANVGVISALV--------GKGDLILSDALN-HASLIDGCRLSGARVR------------RYRH-----  129 (360)
T ss_pred             CCCEEEECchHHHHHHHHHHhC--------CCCCEEEEEccc-cHHHHHHHHhcCCceE------------EecC-----
Confidence            2456777788999988776553        234566665544 4443333332222110            0111     


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                                   .+.+++++.+......++++++++++++++|.+.+    +++|.++|++||+++|+||+|+ +|..+
T Consensus       130 -------------~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~li~De~~~-~~~~~  191 (360)
T TIGR00858       130 -------------NDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAP----LPQLVALAERYGAWLMVDDAHG-TGVLG  191 (360)
T ss_pred             -------------CCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcC----HHHHHHHHHHcCcEEEEECccc-ccCcC
Confidence                         11467787776432135789999999998898776    9999999999999999999997 44443


Q ss_pred             cc--ceecccCCCCc-----hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH
Q 010250          322 TM--FGCDKYSIKPD-----LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI  394 (514)
Q Consensus       322 ~~--~~~~~~gv~pD-----iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~  394 (514)
                      ..  .....+++.+|     +.++||++++   +.|++++++++++.+....   .  .+..+.+.++..++++.++++.
T Consensus       192 ~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~---~gG~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~a~~~al~~  263 (360)
T TIGR00858       192 EDGRGTLEHFGLKPEPVDIQVGTLSKALGS---YGAYVAGSQALIDYLINRA---R--TLIFSTALPPAVAAAALAALEL  263 (360)
T ss_pred             CCCCchHHhcCCCccCCcEEEEechhhhhc---cCcEEEcCHHHHHHHHHhC---c--cceecCCCCHHHHHHHHHHHHH
Confidence            21  12344556544     4478999875   3378889999988875321   0  1122344667888888899987


Q ss_pred             Hhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-
Q 010250          395 YKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-  472 (514)
Q Consensus       395 ~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-  472 (514)
                      +.. +++.++++++.+++.+.|+++ ....   ....|.++++.+....           ....+.+.|+++||++.+. 
T Consensus       264 ~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~---~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~gI~v~~~~  328 (360)
T TIGR00858       264 IQEEPWRREKLLALIARLRAGLEAL-GFTL---MPSCTPIVPVIIGDNA-----------SALALAEELQQQGIFVGAIR  328 (360)
T ss_pred             HhhCHHHHHHHHHHHHHHHHHHHHc-CCcc---CCCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCeeEeeeC
Confidence            654 357889999999999999876 2221   1234667777764211           1456888999999999742 


Q ss_pred             -------CCEEEEeCCCCCCHHHHHHHHHHHH
Q 010250          473 -------GDNIMMSPPFIMSPEEVDELISKYG  497 (514)
Q Consensus       473 -------g~~iRi~p~~~~t~e~id~~~~~l~  497 (514)
                             ++.+|++++..++++|+++++++|+
T Consensus       329 ~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~  360 (360)
T TIGR00858       329 PPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK  360 (360)
T ss_pred             CCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence                   2479999999999999999999763

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.95  E-value=5.2e-28  Score=232.40  Aligned_cols=385  Identities=18%  Similarity=0.219  Sum_probs=285.0

Q ss_pred             ccccccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHHH
Q 010250           51 ASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQL  129 (514)
Q Consensus        51 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l  129 (514)
                      .+.++.+++..+|.|++++.|.+..|+.  ..+.++....+..++ +||+.+++|.|.   |+||. .++++.+.+...+
T Consensus        48 lt~~eideLiedw~PEPLV~~~~~~~~~--~~~~v~e~~~~~~~~-i~G~~~~N~aS~---NfL~l~~~~~ike~a~~~l  121 (467)
T KOG1358|consen   48 LTEQEIDELIEDWEPEPLVPPVPEDHPV--LNTPVLESVMLPHVT-IDGKDVLNFASA---NFLGLIENEEIKEEASFTL  121 (467)
T ss_pred             CCHHHHHHHHhcCCCCCCCCCCcccccc--cCCcccccccCCceE-ecCceeecccch---hhhhhcccHHHHHHHHHHH
Confidence            4567778889999999999999988865  233447777777777 899999999988   88887 5999999999999


Q ss_pred             hcCCccc---cccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcc
Q 010250          130 NTLPFYH---SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHG  206 (514)
Q Consensus       130 ~~~~~~~---~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG  206 (514)
                      ++++.++   +.|.++.+.+.+++++|++++   +.+..++.+.|..+++.++.+.         .++.+|++.+..-+-
T Consensus       122 rkyGvGsCGPrGFYGt~DvHldlE~~iakF~---G~E~aivYs~gF~ti~S~ipaf---------sKrGDIi~~de~~nf  189 (467)
T KOG1358|consen  122 RKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM---GTEDAIVYSYGFSTIESAIPAF---------SKRGDIIFVDEAVNF  189 (467)
T ss_pred             HHhCCCCcCCCcccccceeecccHHHHHHhh---CCcceeeeccccchhhhcchhh---------hccCcEEEEehhhhH
Confidence            9976544   344568899999999999998   5677888999999999999765         467889999888877


Q ss_pred             cceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC------C---CcEEEEEE
Q 010250          207 STLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG------P---ETIAAFIA  277 (514)
Q Consensus       207 ~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~------~---~~~aaviv  277 (514)
                      ....++.+|.+...                              .|.|+++++||.++.+..      +   .....+++
T Consensus       190 aIq~GlqlSRS~i~------------------------------~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~  239 (467)
T KOG1358|consen  190 AIQKGLQLSRSTIS------------------------------YFKHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVV  239 (467)
T ss_pred             HHHHHHhhhhheeE------------------------------EecCCCHHHHHHhccCcchhhhhccccccceEEEEE
Confidence            76666666654332                              256677888888765422      1   12578999


Q ss_pred             ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--cceecccCCC---Cchhchh--hhhcCCcccce
Q 010250          278 EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MFGCDKYSIK---PDLVSFA--KALSSAYMPIG  350 (514)
Q Consensus       278 Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--~~~~~~~gv~---pDiv~~s--K~l~gG~~pig  350 (514)
                      |.++-+.|.++|    |++|.++..||...+|.||..+ ||-.|+  .+..+|+++.   .|+++.|  -++++|    |
T Consensus       240 EGl~~N~g~i~p----l~~iv~lk~Kyk~RvildEs~S-fG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~----G  310 (467)
T KOG1358|consen  240 EGLYANTGDICP----LPEIVKLKNKYKFRVILDESLS-FGVLGKTGRGVTEHFGVPITDIDIVTASMETALASG----G  310 (467)
T ss_pred             EeeccCCCcccc----cHHHHHHHhhheEEEEEecccc-cccccccCccccccCCCCccceeeeeeccccccccc----C
Confidence            999999999999    9999999999999999999998 766666  5678999986   4555544  355543    3


Q ss_pred             eEEeCHHHHHHhhhccCCCCcccccCCCCC--cHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEE
Q 010250          351 AILVSPEVSEVIHSQSNTLGSFSHGFTYSG--HPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI  427 (514)
Q Consensus       351 ~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~--~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v  427 (514)
                      +.++....+-..++      ....++.|+.  .|+...+|..+++++++ +++.+.++.....+...|+....  +...-
T Consensus       311 gFc~G~~~i~~hQr------LSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~s~--~~v~~  382 (467)
T KOG1358|consen  311 GFCAGKSFIADHQR------LSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSNSG--FIVSG  382 (467)
T ss_pred             ceeecceeeEeeee------ccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhhhcCCc--eEEec
Confidence            44444444333332      1234455554  58888889999998875 45777788877888887776422  12222


Q ss_pred             EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----------CCEEEEeCCCCCCHHHHHHHHHHH
Q 010250          428 RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----------GDNIMMSPPFIMSPEEVDELISKY  496 (514)
Q Consensus       428 ~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----------g~~iRi~p~~~~t~e~id~~~~~l  496 (514)
                      ...+.++.+.+.....+.   ..+..+.+.+...|..+|+++...           ..+||++....+++|||+++.+.|
T Consensus       383 ~~~SPi~hl~l~~~~~s~---e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~i  459 (467)
T KOG1358|consen  383 SPESPIIHLQLERSYGSR---EKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELI  459 (467)
T ss_pred             CcCCceeeeeecccccch---HHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHH
Confidence            234667777776644322   234455677888888889887632           247999999999999999999999


Q ss_pred             HHHHHHH
Q 010250          497 GKALKAT  503 (514)
Q Consensus       497 ~~~l~~~  503 (514)
                      +++...+
T Consensus       460 k~~~~~~  466 (467)
T KOG1358|consen  460 KEVASAV  466 (467)
T ss_pred             HHHHHhh
Confidence            9887543

>PLN02483 serine palmitoyltransferase

Probab=99.95  E-value=2.7e-26  Score=242.15  Aligned_cols=335  Identities=17%  Similarity=0.211  Sum_probs=228.7

Q ss_pred             CCCCEEEEccCCcccccCCCC--CHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCCh
Q 010250           97 VNGKKYLDSLAGLWCTALGGS--EPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSG  171 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~--~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sG  171 (514)
                      .+++++|||.|+   ++||.+  ++.+.+++.+++++....   ++...++.+.+.+++++|+++++   .+..+++++|
T Consensus        97 ~~~~~~~n~~s~---~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g---~~~ai~~~~G  170 (489)
T PLN02483         97 TKTRRCLNLGSY---NYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG---KPAAIVFGMG  170 (489)
T ss_pred             CCCceEEEeecC---CccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC---CCcEEEECCH
Confidence            457899999998   889985  677888888888775432   22234577889999999999984   3456677889


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhH
Q 010250          172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE  251 (514)
Q Consensus       172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (514)
                      +.++..++....        .+++.||+.+.+|++ ...+...+|.....                              
T Consensus       171 ~~an~~~i~al~--------~~Gd~Vi~d~~~h~s-~~~~~~~~Ga~v~~------------------------------  211 (489)
T PLN02483        171 YATNSTIIPALI--------GKGGLIISDSLNHNS-IVNGARGSGATIRV------------------------------  211 (489)
T ss_pred             HHHHHHHHHHhC--------CCCCEEEEcchhhHH-HHHHHHHcCCeEEE------------------------------
Confidence            999887776542        234566655555544 33333333322110                              


Q ss_pred             HHHHHHHHHHHHHHHh----C-----CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-C-cccc
Q 010250          252 YSTRLANNLEDLILKE----G-----PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-A-FGRL  320 (514)
Q Consensus       252 ~~~~~~~~le~li~~~----~-----~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G-~gr~  320 (514)
                      +.+++.+++++++.+.    .     |....+|++|++.++.|.+.+    +++|.++|++||+++|+||+|+ | +|++
T Consensus       212 ~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~----l~~I~~la~~~~~~livDEa~s~g~~G~~  287 (489)
T PLN02483        212 FQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCK----LPEIVAVCKKYKAYVYLDEAHSIGAVGKT  287 (489)
T ss_pred             EeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccC----HHHHHHHHHHcCCEEEEECcCccCccCCC
Confidence            0011135555555421    1     223568999999999999987    9999999999999999999997 1 3455


Q ss_pred             cccceecccCCCC---chh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCC--CCcHHHHHHHHHHHH
Q 010250          321 GTMFGCDKYSIKP---DLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY--SGHPVSCAVAIEALK  393 (514)
Q Consensus       321 G~~~~~~~~gv~p---Div--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~--~~~pl~~aaa~aal~  393 (514)
                      |.. ..+++++.|   |++  +|||+++..   .|++++++++++.+...       .++.++  +.+|..++++.++|+
T Consensus       288 G~g-~~~~~~v~~~~~dI~~~SfSKs~g~~---GG~i~~~~~li~~l~~~-------~~~~~~~~~~~p~~~~~~~aaL~  356 (489)
T PLN02483        288 GRG-VCELLGVDPADVDIMMGTFTKSFGSC---GGYIAGSKELIQYLKRT-------CPAHLYATSMSPPAVQQVISAIK  356 (489)
T ss_pred             CCc-hHHhcCCCcccCcEEEEecchhcccC---ceEEEcCHHHHHHHHHh-------CccccccCCcCHHHHHHHHHHHH
Confidence            533 456667654   666  799999752   37888999999998742       222233  346777778888898


Q ss_pred             HHhhc-------cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250          394 IYKER-------NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG  466 (514)
Q Consensus       394 ~~~~~-------~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G  466 (514)
                      .+..+       +..++++++.+++++.|+++ ...+...  ..+.+.++.+....           ....+++.|+++|
T Consensus       357 ~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~-G~~v~~~--~~sp~~~l~l~~~~-----------~~~~~~~~Ll~~G  422 (489)
T PLN02483        357 VILGEDGTNRGAQKLAQIRENSNFFRSELQKM-GFEVLGD--NDSPVMPIMLYNPA-----------KIPAFSRECLKQN  422 (489)
T ss_pred             HHHhCccccchHHHHHHHHHHHHHHHHHHHHC-CCcccCC--CCCCEEEEEECCHH-----------HHHHHHHHHHHCC
Confidence            76522       24678888899999999876 2222111  12345555543221           1345888999999


Q ss_pred             cEEEeeC--------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          467 MLVRVSG--------DNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       467 v~~~~~g--------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      |.+.+.+        ..+||++++.+|+|||++++++|+++++.+.-
T Consensus       423 I~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~~  469 (489)
T PLN02483        423 VAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVGI  469 (489)
T ss_pred             cEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhCc
Confidence            9998421        46999999999999999999999998876543

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=99.94  E-value=2.7e-25  Score=213.74  Aligned_cols=329  Identities=19%  Similarity=0.227  Sum_probs=252.4

Q ss_pred             ccCCcccccCCC-CCHHHHHHHHHHHhcCCc---cccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHH
Q 010250          105 SLAGLWCTALGG-SEPRLVAAATAQLNTLPF---YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVK  180 (514)
Q Consensus       105 ~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~---~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk  180 (514)
                      ++|+   .+||. .||+|.+|+.+.+++.+.   +.+...+.+..+.+|+++|+++.   ..+..++++|..-||++.+-
T Consensus       176 WCSN---DYLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LH---qK~aALlFsSCfVANDstLf  249 (570)
T KOG1360|consen  176 WCSN---DYLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLH---QKEAALLFSSCFVANDSTLF  249 (570)
T ss_pred             EecC---ccccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHh---cCcceeeeeeeeeccchHHH
Confidence            3666   66887 599999999999998432   34555677888999999999997   34678889999999999987


Q ss_pred             HHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHH
Q 010250          181 LVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL  260 (514)
Q Consensus       181 ~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  260 (514)
                      ..-..       =..-+|+.+.+.|.+.+.++.-++.+.+                              -|.|||+++|
T Consensus       250 tLak~-------lpgcei~SD~gNHASMI~GIrns~v~K~------------------------------IFrHND~~hL  292 (570)
T KOG1360|consen  250 TLAKK-------LPGCEIFSDEGNHASMIQGIRNSRVPKH------------------------------IFRHNDLDHL  292 (570)
T ss_pred             HHHHH-------CCCcEEeccccchHHHHHHhhhcCCcce------------------------------eeccCCHHHH
Confidence            54211       1346788888999988877776665432                              2678889999


Q ss_pred             HHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce--ecccCC--CCchh
Q 010250          261 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG--CDKYSI--KPDLV  336 (514)
Q Consensus       261 e~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~--~~~~gv--~pDiv  336 (514)
                      +++++...+.....|-+|.|+++.|.++|    |++|.++++|||++..+|||+. .|-.|..++  -++.|+  +.||+
T Consensus       293 ~~lL~~~~~svPKivAFEtVhSM~Gavcp----leelcDvah~yGAiTFlDEVHA-VGlYG~rGaGvgerdGvm~kvDiI  367 (570)
T KOG1360|consen  293 EQLLQSSPKSVPKIVAFETVHSMDGAVCP----LEELCDVAHKYGAITFLDEVHA-VGLYGPRGAGVGERDGVMHKVDII  367 (570)
T ss_pred             HHHHHhCCCCCCceEEEeeeeccCCCcCC----HHHHHHHHHHhCceeeeehhhh-hccccCCCCCccccCCcchhhhhc
Confidence            99999887777889999999999999999    9999999999999999999998 666666443  466777  46887


Q ss_pred             --chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHH
Q 010250          337 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKF  411 (514)
Q Consensus       337 --~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l  411 (514)
                        |+||++|.=   -|++.++..++|.+++..   .  ...+|.+..|+.++.|++++++++.+   .++...+++..++
T Consensus       368 sGTLgKafGcV---GGYIAat~~LvDmiRSyA---a--GFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~  439 (570)
T KOG1360|consen  368 SGTLGKAFGCV---GGYIAATRKLVDMIRSYA---A--GFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYV  439 (570)
T ss_pred             ccchhhhcccc---cceehhhhhHHHHHHHhc---C--ceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence              699999861   257888999999998531   1  23367788899999999999998754   3566777888899


Q ss_pred             HhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEe-------eC-CEEEEeCCC
Q 010250          412 QDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRV-------SG-DNIMMSPPF  482 (514)
Q Consensus       412 ~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~-------~g-~~iRi~p~~  482 (514)
                      ++.|.++ ..|++.   ....++.+.+.+..           +..+.+..|+ ++|+++..       .| +.+|++|.-
T Consensus       440 kq~l~~~-GiPVi~---~pSHIiPv~vgda~-----------l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP  504 (570)
T KOG1360|consen  440 KQLLMEL-GIPVIP---NPSHIIPVRVGDAA-----------LAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTP  504 (570)
T ss_pred             HHHHHHc-CCcccC---CCcceeeeeccCHH-----------HHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCC
Confidence            9999886 444432   23344555554332           3445555554 67999872       23 469999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHH
Q 010250          483 IMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       483 ~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      .+|++.++.+++.+..+.+++.
T Consensus       505 ~HT~~mm~~lv~~l~~vw~~v~  526 (570)
T KOG1360|consen  505 HHTPQMMNILVNALLDVWNEVG  526 (570)
T ss_pred             CCCHHHHHHHHHHHHHHHHHcC
Confidence            9999999999999999988764

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.94  E-value=3.5e-24  Score=218.05  Aligned_cols=328  Identities=22%  Similarity=0.270  Sum_probs=220.5

Q ss_pred             CEEEEccCCcccccCCCC-CHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHH
Q 010250          100 KKYLDSLAGLWCTALGGS-EPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAN  175 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~-~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~  175 (514)
                      ++||.|+++   .+|||. ||+|++|+++.+++....   +....+..+...++.+.|+++++   .+..+++++|++++
T Consensus         1 ~~~~~~~~~---~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~~~~iv~~sg~~a~   74 (349)
T cd06454           1 KKVLNFCSN---DYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHG---KEAALVFSSGYAAN   74 (349)
T ss_pred             CCceecccC---CccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhC---CCCEEEeccHHHHH
Confidence            579999988   889995 999999999999874332   12223466778899999999884   34578889999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      ..+++.+.        .+++.|++.++ +|+.........+....            .++.                  .
T Consensus        75 ~~~~~~~~--------~~gd~Vl~~~~-~~~~~~~~~~~~g~~~~------------~~~~------------------~  115 (349)
T cd06454          75 DGVLSTLA--------GKGDLIISDSL-NHASIIDGIRLSGAKKR------------IFKH------------------N  115 (349)
T ss_pred             HHHHHHhc--------CCCCEEEEehh-hhHHHHHHHHHcCCceE------------EecC------------------C
Confidence            98887653        23456776554 44443322222221110            0000                  0


Q ss_pred             HHHHHHHHHHHhC-CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccC---
Q 010250          256 LANNLEDLILKEG-PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYS---  330 (514)
Q Consensus       256 ~~~~le~li~~~~-~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~g---  330 (514)
                      +.+++++++.+.. ++++++|+++++++.+|.+.+    +++|.++|++||+++|+||+|. +|..+..+ ......   
T Consensus       116 ~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~livD~a~~-~g~~~~~~~~~~~~~~~~  190 (349)
T cd06454         116 DMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP----LPELVDLAKKYGAILFVDEAHS-VGVYGPHGRGVEEFGGLT  190 (349)
T ss_pred             CHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC----HHHHHHHHHHcCCEEEEEcccc-ccccCCCCCChhhhcccc
Confidence            1356777776432 346789999999999998876    9999999999999999999996 44333211 111111   


Q ss_pred             CCCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHH
Q 010250          331 IKPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKI  407 (514)
Q Consensus       331 v~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~  407 (514)
                      ...|++  +++|.++.   +.|++++++++++.+....     .....+.+.++..++++.++++.+.+ ++..+++.++
T Consensus       191 ~~~~i~~~s~sK~~~~---~gG~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  262 (349)
T cd06454         191 DDVDIIMGTLGKAFGA---VGGYIAGSKELIDYLRSYA-----RGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQEN  262 (349)
T ss_pred             ccCcEEEeechhhhcc---cCCEEECCHHHHHHHHHhc-----hhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            234655  58898875   4477888999888876421     11222345678888888999988765 5578889999


Q ss_pred             HHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--------CCEEEEe
Q 010250          408 APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------GDNIMMS  479 (514)
Q Consensus       408 ~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------g~~iRi~  479 (514)
                      .+++.+.|+++ ..+....  +.+.+..+.+.+..           ....+.+.|.++||.+.+.        ++.||++
T Consensus       263 ~~~l~~~l~~~-g~~~~~~--~~~~~~~~~~~~~~-----------~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~  328 (349)
T cd06454         263 VRYLRRGLKEL-GFPVGGS--PSHIIPPLIGDDPA-----------KAVAFSDALLERGIYVQAIRYPTVPRGTARLRIS  328 (349)
T ss_pred             HHHHHHHHHhc-CCcccCC--CCCcEEEEeCCChH-----------HHHHHHHHHHhCCceEEEecCCccCCCCCeEEEE
Confidence            99999998875 2222211  11222223221110           2456888999999998752        2579999


Q ss_pred             CCCCCCHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~  499 (514)
                      ++...+++++++++++|+++
T Consensus       329 ~~~~~~~~~i~~~~~~l~~~  348 (349)
T cd06454         329 LSAAHTKEDIDRLLEALKEV  348 (349)
T ss_pred             EeCCCCHHHHHHHHHHHHHh
Confidence            99889999999999999764

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.91  E-value=5.6e-23  Score=213.12  Aligned_cols=337  Identities=13%  Similarity=0.062  Sum_probs=208.9

Q ss_pred             CCcccccCCCCCHHHHHHHHHHHhcCCccccc-----cccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHH
Q 010250          107 AGLWCTALGGSEPRLVAAATAQLNTLPFYHSF-----WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKL  181 (514)
Q Consensus       107 s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~-----~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~  181 (514)
                      .+++....||++|++++++..++ .....+..     +.+..+...+++++++++++ .+.+.++++++|+++.+.+++.
T Consensus        23 ~~l~~g~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g-~~~~~v~~~~~g~~~~~~~~~~  100 (398)
T cd00613          23 SFLGSGTYKHNPPAVIKRNILEN-EFYTAYTPYQPEISQGRLQALFELQTMLCELTG-MDVANASLQDEATAAAEAAGLA  100 (398)
T ss_pred             ccccccccCCcCcHHHHHHhccc-cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHC-CCccceeccCchHHHHHHHHHH
Confidence            45666779999999998877776 32111111     22344566788999998874 2344788888888788888877


Q ss_pred             HHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHH
Q 010250          182 VWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE  261 (514)
Q Consensus       182 a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le  261 (514)
                      ++..      +++.+.|++...+|+.+...+...+...     +   ..+..+++++.+             ..+.++++
T Consensus       101 ~~~~------~~~gd~Vl~~~~~h~~~~~~~~~~~~~~-----g---~~~~~v~~~~~~-------------~~d~~~l~  153 (398)
T cd00613         101 AIRA------YHKRNKVLVPDSAHPTNPAVARTRGEPL-----G---IEVVEVPSDEGG-------------TVDLEALK  153 (398)
T ss_pred             HHhc------ccCCCEEEEcCccCcchHHHHHHhcccC-----C---cEEEEeccCCCC-------------CcCHHHHH
Confidence            6522      2123445556778888766665444211     0   011112221111             01246666


Q ss_pred             HHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hh
Q 010250          262 DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FA  339 (514)
Q Consensus       262 ~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~s  339 (514)
                      +.+.    +++++|++++++ ++|.+.   ++|++|+++|++||+++|+|++|+.....+.   ...+  .+|+++  ++
T Consensus       154 ~~i~----~~t~~viv~~~~-~~G~~~---~~l~~i~~la~~~g~~livD~~~~~~~~~~~---~~~~--~~d~~~~s~~  220 (398)
T cd00613         154 EEVS----EEVAALMVQYPN-TLGVFE---DLIKEIADIAHSAGALVYVDGDNLNLTGLKP---PGEY--GADIVVGNLQ  220 (398)
T ss_pred             HhcC----CCeEEEEEECCC-CCceec---chHHHHHHHHHhcCCEEEEEeccccccCCCC---hHHc--CCCEEEeecc
Confidence            6653    468888888875 568773   4689999999999999999998863211111   1112  478775  45


Q ss_pred             hhh---cCCcccceeEEeCHHHHHHhhhccCC-------C-------C------c--ccccCCCCCcHHHHHHHHHHHHH
Q 010250          340 KAL---SSAYMPIGAILVSPEVSEVIHSQSNT-------L-------G------S--FSHGFTYSGHPVSCAVAIEALKI  394 (514)
Q Consensus       340 K~l---~gG~~pig~v~~~~~i~~~l~~~~~~-------~-------~------~--~~~~~t~~~~pl~~aaa~aal~~  394 (514)
                      |.+   ++|++.+|++++++++++.+......       .       .      .  ....++++++++.+.++.++++.
T Consensus       221 K~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~  300 (398)
T cd00613         221 KTGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVY  300 (398)
T ss_pred             ccCCCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHH
Confidence            754   34447788888888887765321000       0       0      0  01234567778888888887877


Q ss_pred             Hhhc---cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe
Q 010250          395 YKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV  471 (514)
Q Consensus       395 ~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~  471 (514)
                      +.++   ++.+++++++++++++|+++.........  ....+.+.+.....         .....++..|.++|+++..
T Consensus       301 ~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~~~v~~~~~~~~~---------~~~~~~~~~L~~~gi~~~~  369 (398)
T cd00613         301 LGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGP--FFHEFVLRLPPLYG---------IRAEDLAKALIDGGFHAPT  369 (398)
T ss_pred             hCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCC--eeEEEEEEcCCcch---------HHHHHHHHhhhhcCccccc
Confidence            6543   35688999999999999886221111111  11122333322100         0245688899999998765


Q ss_pred             ----eCCEEEEeCCCCCCHHHHHHHHHHH
Q 010250          472 ----SGDNIMMSPPFIMSPEEVDELISKY  496 (514)
Q Consensus       472 ----~g~~iRi~p~~~~t~e~id~~~~~l  496 (514)
                          .++.||++|++.+|+||||++++.|
T Consensus       370 ~~~~~~~~lRis~~~~~t~edid~~~~~L  398 (398)
T cd00613         370 MYLPVDGTLMIEPTETETKEELDALLEAL  398 (398)
T ss_pred             cccCCCCeEEEEcCCCCCHHHHHHHHHhC
Confidence                3467999999999999999998864

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.90  E-value=1.1e-21  Score=201.07  Aligned_cols=339  Identities=15%  Similarity=0.143  Sum_probs=222.6

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEAND  176 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA~~  176 (514)
                      ...||+..|   .+--..++.+++++.+++.... +|+. ..+..++...+++++.+.++ ....+ .|+.|++++||+.
T Consensus        28 ~~vi~l~iG---~Pd~~~p~~i~~a~~~a~~~~~~~Y~~-~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~  103 (393)
T COG0436          28 EDVIDLSIG---EPDFPTPEHIIEAAIEALEEGGTHYTP-SAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALF  103 (393)
T ss_pred             CCEEEeCCC---CCCCCCCHHHHHHHHHHHhcccCCCCC-CCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHH
Confidence            468888777   3433368889999999998764 3332 23455555666666666643 12333 4999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  255 (514)
                      .++....        .+.+.||+.+++|-.+.......++.+....           ...+ ..|..             
T Consensus       104 ~~~~a~~--------~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~-----------l~~~~~~f~~-------------  151 (393)
T COG0436         104 LAFLALL--------NPGDEVLIPDPGYPSYEAAVKLAGGKPVPVP-----------LDEEENGFKP-------------  151 (393)
T ss_pred             HHHHHhc--------CCCCEEEEeCCCCcCHHHHHHhcCCEEEEEe-----------CCcCccCCcC-------------
Confidence            9998774        3456799999999887655555555433210           0000 11111             


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc-cc-eecccCCC-
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MF-GCDKYSIK-  332 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~-~~-~~~~~gv~-  332 (514)
                      +.++|++.+.   +++.+.++..|.|++ |. +.++++|++|.++|++||+++|+||+|.+|...|. .. ..+..+.. 
T Consensus       152 d~~~l~~~i~---~ktk~i~ln~P~NPT-Ga-v~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~  226 (393)
T COG0436         152 DLEDLEAAIT---PKTKAIILNSPNNPT-GA-VYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARD  226 (393)
T ss_pred             CHHHHHhhcC---ccceEEEEeCCCCCc-Cc-CCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcc
Confidence            1477777775   333444444555555 54 34679999999999999999999999999987774 22 12222211 


Q ss_pred             --CchhchhhhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh----ccHHHHHH
Q 010250          333 --PDLVSFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE----RNIVEQVN  405 (514)
Q Consensus       333 --pDiv~~sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~----~~~~~~~~  405 (514)
                        .-+-+|||.++-.+|++|+++++ +++++.+..       .....+++.+.+++.++.++|+.-++    +...+..+
T Consensus       227 ~~i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~-------~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~  299 (393)
T COG0436         227 RTITINSFSKTYGMTGWRIGWVVGPPEELIAALRK-------LKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYR  299 (393)
T ss_pred             eEEEEecccccccccccceeEeecChHHHHHHHHH-------HHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHH
Confidence              11226899555323999999999 888877752       12334567788899999999974321    23346788


Q ss_pred             HHHHHHHhhhhhccCCCceeEEE-eeeeeEE-EEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-------C-C
Q 010250          406 KIAPKFQDGVKAFSDSPIIGEIR-GTGLILG-TEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------G-D  474 (514)
Q Consensus       406 ~~~~~l~~~L~~l~~~~~~~~v~-g~g~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-------g-~  474 (514)
                      ++++.+.+.|+++   +...... ..|.++. .++....           ....|+..|++ .||.+.|+       | +
T Consensus       300 ~rrd~l~~~l~~~---~g~~~~~~p~Ga~Y~~~~i~~~~-----------d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~  365 (393)
T COG0436         300 ERRDLLVEALNEI---GGLSVVKPPEGAFYLFPKIPELL-----------DSEEFAKKLLEEAGVAVVPGSGFGEPPGEG  365 (393)
T ss_pred             HHHHHHHHHHHhc---CCeeeccCCCeeEEEEeecCCCC-----------CHHHHHHHHHHhCCEEEecccccCCCCCCC
Confidence            8888999988876   2222333 3455444 4443321           13456666665 58999874       1 3


Q ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          475 NIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       475 ~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      .+|++  +..+++++++++++|.+.++.
T Consensus       366 ~vRis--~~~~~~~l~~a~~rl~~~~~~  391 (393)
T COG0436         366 YVRLS--LATSEETLEEALRRLARFLAE  391 (393)
T ss_pred             eEEEE--EecCHHHHHHHHHHHHHHHHh
Confidence            69999  888999999999999998865

>PRK06225 aspartate aminotransferase; Provisional

Probab=99.90  E-value=2.5e-21  Score=199.55  Aligned_cols=343  Identities=13%  Similarity=0.142  Sum_probs=214.7

Q ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250           97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND  176 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~  176 (514)
                      .+++.+||+..+.  +.++ .+|.+.+++.+++......  . ........++.+.++++++ .+.+++++++|+++|+.
T Consensus        25 ~~~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~~--~-y~~~~g~~~lr~~ia~~l~-~~~~~v~~~~g~t~al~   97 (380)
T PRK06225         25 FKDKEMIWMGQNT--NHLG-PHEEVREAMIRCIEEGEYC--K-YPPPEGFPELRELILKDLG-LDDDEALITAGATESLY   97 (380)
T ss_pred             hhcCCeEEccCCC--CCCC-CCHHHHHHHHHHHhcCCCC--C-CCCCcchHHHHHHHHHhcC-CCCCcEEEeCCHHHHHH
Confidence            3456788887653  4454 6899999999988753211  1 1122335778889998874 34578999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL  256 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (514)
                      .+++.+.        ..++.|++.+++|+....... ..|....            .++....     +    +.+ ..+
T Consensus        98 ~~~~~~~--------~~gd~vl~~~p~y~~~~~~~~-~~g~~~~------------~v~~~~~-----~----~~~-~~d  146 (380)
T PRK06225         98 LVMRAFL--------SPGDNAVTPDPGYLIIDNFAS-RFGAEVI------------EVPIYSE-----E----CNY-KLT  146 (380)
T ss_pred             HHHHHhc--------CCCCEEEEcCCCCcchHHHHH-HhCceEE------------eeccccc-----c----CCc-cCC
Confidence            9998763        234679999999875421111 1111110            0010000     0    000 112


Q ss_pred             HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecc-cCCCCch
Q 010250          257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK-YSIKPDL  335 (514)
Q Consensus       257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~-~gv~pDi  335 (514)
                      .+++++.+.   ++..+.++++|. +.+|.+. +++.+++|.++|++||+++|+||+|.+|.. +....... .....++
T Consensus       147 ~~~l~~~~~---~~~~~v~l~~p~-NptG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~i~~  220 (380)
T PRK06225        147 PELVKENMD---ENTRLIYLIDPL-NPLGSSY-TEEEIKEFAEIARDNDAFLLHDCTYRDFAR-EHTLAAEYAPEHTVTS  220 (380)
T ss_pred             HHHHHhhcC---CCceEEEEeCCC-CCCCcCC-CHHHHHHHHHHHHHCCcEEEEehhHHHHhc-cCCchhhcCCCCEEEE
Confidence            456666553   233344456664 4556554 567899999999999999999999987632 22111111 0111235


Q ss_pred             hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHh
Q 010250          336 VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQD  413 (514)
Q Consensus       336 v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~  413 (514)
                      .+|||.++.+++++|++++++++++.+...        ...+++.+.++++++.++++...+  +.+.+..+++.+.+.+
T Consensus       221 ~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~--------~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~  292 (380)
T PRK06225        221 YSFSKIFGMAGLRIGAVVATPDLIEVVKSI--------VINDLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKE  292 (380)
T ss_pred             eechhhcCCccceeEEEecCHHHHHHHHHH--------HhcccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHH
Confidence            588999973338999999999999887641        123566788888888777753211  1233344455556666


Q ss_pred             hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--------CCEEEEeCCCCCC
Q 010250          414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------GDNIMMSPPFIMS  485 (514)
Q Consensus       414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------g~~iRi~p~~~~t  485 (514)
                      .|+++.... +......|.++++.+.....          ....+...|.++||.+.++        .+.+|++  +..+
T Consensus       293 ~L~~~~~~~-~~~~~~~g~~~~~~~~~~~~----------~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s--~~~~  359 (380)
T PRK06225        293 AVDEIEGVF-LPVYPSHGNMMVIDISEAGI----------DPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVS--FSIP  359 (380)
T ss_pred             HHHhCcCCc-cccCCCCCeEEEEEcccccC----------CHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEE--eCCC
Confidence            666542211 11223457777887754211          1345788888999998864        1369999  6678


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 010250          486 PEEVDELISKYGKALKATE  504 (514)
Q Consensus       486 ~e~id~~~~~l~~~l~~~~  504 (514)
                      +|++++++++|++++++++
T Consensus       360 ~e~l~~~~~~l~~~~~~~~  378 (380)
T PRK06225        360 REQVEVFCEEFPDVVETLR  378 (380)
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            9999999999999998765

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=99.90  E-value=1.9e-21  Score=199.56  Aligned_cols=325  Identities=16%  Similarity=0.155  Sum_probs=208.7

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----C-cCCCCeEEEeCChhHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----T-ASKMAKVFFTNSGSEAN  175 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~-~~~~~~v~~~~sGseA~  175 (514)
                      .++|+..|.  ++++ .+|.+++++.+.+.........+  +.....+|.+.+++++    + ....++|++++|+++++
T Consensus        27 ~~i~l~~~~--~~~~-~~~~~~~al~~~l~~~~~~~~~Y--~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l  101 (368)
T PRK03317         27 VPVRLNTNE--NPYP-PSPALVADIAEAVAEAAAGLNRY--PDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEIL  101 (368)
T ss_pred             ceeEecCCC--CCCC-CCHHHHHHHHHHHhhhhhhhccC--CCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHH
Confidence            368887663  3454 78899999998875321100111  2222345556666655    2 23567899999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      ..+++...        ..++.|++..++|++........ +...            ..++..+.|.             .
T Consensus       102 ~~~~~~~~--------~~gd~v~v~~P~y~~~~~~~~~~-g~~~------------~~~~~~~~~~-------------~  147 (368)
T PRK03317        102 QQLLQAFG--------GPGRTALGFVPSYSMHPIIARGT-HTEW------------VEGPRAADFT-------------L  147 (368)
T ss_pred             HHHHHHhc--------CCCCEEEEeCCChHHHHHHHHhc-CCee------------EEcccCCCCC-------------C
Confidence            99998763        33467999999998864322211 1110            0011000111             1


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL  335 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi  335 (514)
                      +++++++++...   ++.++++...++++|.+.+    +++++++|+.+++++|+||+|++|++.|........+..|++
T Consensus       148 d~~~l~~~~~~~---~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~~~  220 (368)
T PRK03317        148 DVDAAVAAIAEH---RPDVVFLTSPNNPTGTALP----LDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPEYPRL  220 (368)
T ss_pred             CHHHHHHHHhcc---CCCEEEEeCCCCCCCCCCC----HHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHhCCCE
Confidence            146677666532   2334444455777888876    788888888889999999999999776654444444555777


Q ss_pred             h---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHH
Q 010250          336 V---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKF  411 (514)
Q Consensus       336 v---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l  411 (514)
                      +   +|||+++.+++|+|++++++++++.+...         ..+++.++++++++.++|+..+. .+..++++++.+.+
T Consensus       221 i~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~---------~~~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l  291 (368)
T PRK03317        221 VVSRTMSKAFAFAGGRLGYLAAAPAVVDALRLV---------RLPYHLSAVTQAAARAALRHADELLASVAALRAERDRV  291 (368)
T ss_pred             EEEEechhhhccchhhhhhhhCCHHHHHHHHhc---------CCCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence            6   89999974338999999999999988731         13677889999999888874322 12234455556666


Q ss_pred             HhhhhhccCCCceeEEEeeeeeEEE-EEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--CEEEEeCCCCCCHHH
Q 010250          412 QDGVKAFSDSPIIGEIRGTGLILGT-EFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEE  488 (514)
Q Consensus       412 ~~~L~~l~~~~~~~~v~g~g~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--~~iRi~p~~~~t~e~  488 (514)
                      .+.|++.   ++ ......|.++.+ .+.              ....+.+.|+++||++.+.+  +++|++   ..++++
T Consensus       292 ~~~L~~~---g~-~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~~Gv~v~~~~~~~~iRi~---~~~~~~  350 (368)
T PRK03317        292 VAWLREL---GL-RVAPSDANFVLFGRFA--------------DRHAVWQGLLDRGVLIRDVGIPGWLRVT---IGTPEE  350 (368)
T ss_pred             HHHHHHC---CC-EeCCCCCcEEEEeccC--------------CHHHHHHHHHHCCEEEEeCCCCCeEEEe---cCCHHH
Confidence            6666553   22 112233444333 221              13457889999999998754  579999   357889


Q ss_pred             HHHHHHHHHHHHH
Q 010250          489 VDELISKYGKALK  501 (514)
Q Consensus       489 id~~~~~l~~~l~  501 (514)
                      +++++++|+++++
T Consensus       351 ~~~~~~~l~~~~~  363 (368)
T PRK03317        351 NDAFLAALAEVLA  363 (368)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999998875

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=99.90  E-value=1e-21  Score=198.58  Aligned_cols=302  Identities=14%  Similarity=0.082  Sum_probs=198.6

Q ss_pred             ccCCC-CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcC
Q 010250          112 TALGG-SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG  190 (514)
Q Consensus       112 ~~lGh-~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~  190 (514)
                      ++||. +||+|.+|..+++++.+       ++.+.+.+|+++|+++++ .+.+++++++||++|+..++....       
T Consensus        28 ~ylgl~~~~~~~~~~~~~~~~~~-------g~~~~~~~Le~~lA~~~g-~~~e~ilv~~gg~~a~~~~~~al~-------   92 (346)
T TIGR03576        28 DLTGLAGGFKIDEEDLELLETYV-------GPAIFEEKVQELGREHLG-GPEEKILVFNRTSSAILATILALE-------   92 (346)
T ss_pred             ccccCCCChhHHHHHHHHHHHhc-------CCHHHHHHHHHHHHHHcC-CCcceEEEECCHHHHHHHHHHHhC-------
Confidence            45676 69999999999998752       456888999999999984 234899999999999999997663       


Q ss_pred             CCCccEEEEE--ecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC
Q 010250          191 RPNKKKFIAR--QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG  268 (514)
Q Consensus       191 ~~~~~~ii~~--~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~  268 (514)
                       .+++.|++.  +..+|.+......++|...+.              ..                  ++++++    . .
T Consensus        93 -~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~--------------~~------------------~l~~l~----~-~  134 (346)
T TIGR03576        93 -PPGRKVVHYLPEKPAHPSIPRSCKLAGAEYFE--------------SD------------------ELSELK----K-I  134 (346)
T ss_pred             -CCCCEEEECCCCCCCchhHHHHHHHcCCEEec--------------cC------------------CHHHHh----h-C
Confidence             234566653  234555543333333321100              00                  012222    1 1


Q ss_pred             CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--cceecccCCCCchh--chhhhhcC
Q 010250          269 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MFGCDKYSIKPDLV--SFAKALSS  344 (514)
Q Consensus       269 ~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--~~~~~~~gv~pDiv--~~sK~l~g  344 (514)
                       ++..+|++++ .++.|.+.+ .+.|++|.++|++||+++|+||+|. .|..|.  .+....++  +|++  +|||+|+|
T Consensus       135 -~~~~lIiitg-~s~~G~v~~-~~~L~~i~~la~~~~~~livDEAy~-~~~~~~~~~~~~~~~~--~divv~s~SKalaG  208 (346)
T TIGR03576       135 -DGTSLVVITG-STMDLKVVS-EEDLKRVIKQAKSKEAIVLVDDASG-ARVRRLYGQPPALDLG--ADLVVTSTDKLMDG  208 (346)
T ss_pred             -cCceEEEEEC-CCCCCcccC-HHHHHHHHHHHHHcCCEEEEECCcc-ccccccCCCCCHHHcC--CcEEEeccchhccc
Confidence             2345667766 466787753 5669999999999999999999997 332221  11122233  4654  68999877


Q ss_pred             CcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCce
Q 010250          345 AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPII  424 (514)
Q Consensus       345 G~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~  424 (514)
                        +++|++++++++++.+....       ..+.++.+|..++++.++|+.+..+...+.++++.+.+.+.++.+   .+.
T Consensus       209 --~r~G~v~~~~~li~~l~~~~-------~~~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~~---~~~  276 (346)
T TIGR03576       209 --PRGGLLAGRKELVDKIKSVG-------EQFGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDKL---NVE  276 (346)
T ss_pred             --cceEEEEeCHHHHHHHHHhh-------cCcccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhC---CCC
Confidence              78999999999999987421       122344678899999999987554456777888888887777754   111


Q ss_pred             eEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee------CCEEEEeCCCCCCHH---HHHHHHHH
Q 010250          425 GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------GDNIMMSPPFIMSPE---EVDELISK  495 (514)
Q Consensus       425 ~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------g~~iRi~p~~~~t~e---~id~~~~~  495 (514)
                        ..+.+ ++.+++....           ..+.....|.++||+++++      .+++||+  +..+++   +.+.++++
T Consensus       277 --~~~~~-f~~~~~~~~~-----------~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis--~~~~~~~~~~~~~~~~a  340 (346)
T TIGR03576       277 --RTPTG-FVIKGVEEEK-----------LIEIGLDLLRNYGIITITAVGMPGASKTLRFD--LAAKDAERIGDDYLVEA  340 (346)
T ss_pred             --cCCCe-EEEEeCCCCC-----------HHHHHHHHHHhCCEEEeCCcccCCCCCeEEEE--EecChHHhcCHHHHHHH
Confidence              11222 4555543210           1234556777899999974      2579999  455544   79999999


Q ss_pred             HHHHH
Q 010250          496 YGKAL  500 (514)
Q Consensus       496 l~~~l  500 (514)
                      |++.+
T Consensus       341 l~~~~  345 (346)
T TIGR03576       341 VKDSL  345 (346)
T ss_pred             HHhcc
Confidence            88764

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=99.88  E-value=2.6e-21  Score=191.29  Aligned_cols=343  Identities=20%  Similarity=0.233  Sum_probs=217.5

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcC-Cc---ccccccc-CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTL-PF---YHSFWNR-TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAN  175 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~-~~---~~~~~~~-~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~  175 (514)
                      .|+|..+...      -+|++++++...+... ..   .|.+ +. .....++..+.++++++ .+.++++||++|||++
T Consensus         3 iYlD~~ATTp------~~~~v~~~m~~~~~~~fgNPsS~H~~-G~~A~~~ve~AR~~iA~llg-a~~~eIiFTSG~TEsn   74 (386)
T COG1104           3 IYLDNAATTP------VDPEVLEAMLPYLTEVFGNPSSLHSF-GREARKAVEEAREQIAKLLG-ADPEEIIFTSGATESN   74 (386)
T ss_pred             ccccccccCC------CCHHHHHHHHHHHHhhcCCccchhHh-HHHHHHHHHHHHHHHHHHhC-CCCCeEEEecCCcHHH
Confidence            5899877743      3799999999998764 11   1222 22 22333445566777764 4458999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      ..||+.+.....+  .+++++||+. ..-|-..+.....-.    +++|.+     ..+++.             ..+..
T Consensus        75 NlaI~g~~~a~~~--~~~~~HIIts-~iEH~aVl~~~~~Le----~~g~~V-----tyl~V~-------------~~G~v  129 (386)
T COG1104          75 NLAIKGAALAYRN--AQKGKHIITS-AIEHPAVLNTCRYLE----RQGFEV-----TYLPVD-------------SNGLV  129 (386)
T ss_pred             HHHHHhhHHhhhc--ccCCCeEEEc-ccccHHHHHHHHHHH----hcCCeE-----EEeCCC-------------CCCeE
Confidence            9999976433221  1234566664 445544332221110    112221     111111             12233


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL  335 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi  335 (514)
                      ++++|++++.    +++..|.+..+||+.|+++|    +++|.++|+++|++|++|-||+ +|+.    ..+......|+
T Consensus       130 ~~e~L~~al~----~~T~LVSim~aNnE~G~IQp----I~ei~~i~k~~~i~fHvDAvQa-~Gki----pi~~~~~~vD~  196 (386)
T COG1104         130 DLEQLEEALR----PDTILVSIMHANNETGTIQP----IAEIGEICKERGILFHVDAVQA-VGKI----PIDLEELGVDL  196 (386)
T ss_pred             cHHHHHHhcC----CCceEEEEEecccCeeeccc----HHHHHHHHHHcCCeEEEehhhh-cCce----eccccccCcce
Confidence            3678888876    56889999999999999999    9999999999999999999997 8776    34444434799


Q ss_pred             hchhh-hhcCCcccceeEEeCHHHHH-HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHH
Q 010250          336 VSFAK-ALSSAYMPIGAILVSPEVSE-VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKF  411 (514)
Q Consensus       336 v~~sK-~l~gG~~pig~v~~~~~i~~-~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l  411 (514)
                      ++||- .++|. -++|+++.++.+.- .+..++.+.+.... +|  -|..+.++.-+|+++..+  +....++..++++|
T Consensus       197 ls~SaHK~~Gp-kGiGaLyv~~~~~~~p~i~GGgQE~g~Rs-GT--env~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l  272 (386)
T COG1104         197 LSFSAHKFGGP-KGIGALYVRPGVRLEPLIHGGGQERGLRS-GT--ENVPGIVGFGKAAEIAVEELEEENARLRKLRDRL  272 (386)
T ss_pred             EEeehhhccCC-CceEEEEECCCCccCceeccCcCCCCCCC-CC--ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            99986 56665 67999999776532 12211111111111 11  233344444455555433  34577888999999


Q ss_pred             Hhhhhhc-cCCCceeE-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----------------
Q 010250          412 QDGVKAF-SDSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----------------  472 (514)
Q Consensus       412 ~~~L~~l-~~~~~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----------------  472 (514)
                      .++|.+. ...-+.+. .........+.|..-.            ++.+...|..+||.++.+                 
T Consensus       273 ~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~------------gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~Am  340 (386)
T COG1104         273 EDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVE------------GESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAM  340 (386)
T ss_pred             HHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCc------------HHHHHHhccccCeEEeccccccCCCCCccHHHHHc
Confidence            9999865 22111111 1223334455554432            445666677778888732                 


Q ss_pred             -------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          473 -------GDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       473 -------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                             ...|||+.....|++|||.+++.|.+.++++++
T Consensus       341 G~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~  380 (386)
T COG1104         341 GISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRE  380 (386)
T ss_pred             CCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence                   146999999999999999999999999988765

>PRK07682 hypothetical protein; Validated

Probab=99.88  E-value=1.3e-20  Score=194.01  Aligned_cols=336  Identities=13%  Similarity=0.124  Sum_probs=208.4

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcC-CccccccccCCchHHHHHHHHHHhcCc-CCCC-eEEEeCChhHHHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTL-PFYHSFWNRTTKPSLDLAKELLEMFTA-SKMA-KVFFTNSGSEANDT  177 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~-~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~-~v~~~~sGseA~~~  177 (514)
                      ..|+|..|..  .++ .++.+.+++.+.+... ..|.. ..+..+....+++.+.+.++. ...+ +|++++||++|+..
T Consensus        21 ~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~   96 (378)
T PRK07682         21 GVISLGVGEP--DFV-TPWNVREASIRSLEQGYTSYTA-NAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDV   96 (378)
T ss_pred             CeEEeCCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence            4678776643  344 4667888888877642 11211 122344455566666554321 2233 79999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCCCCChhHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  255 (514)
                      +++...        .+++.|++.+++|++........+.. ..            .++.  .+.|.             .
T Consensus        97 ~~~~l~--------~~gd~vl~~~p~y~~~~~~~~~~g~~-~~------------~~~~~~~~~~~-------------~  142 (378)
T PRK07682         97 AMRAII--------NPGDEVLIVEPSFVSYAPLVTLAGGV-PV------------PVATTLENEFK-------------V  142 (378)
T ss_pred             HHHHhC--------CCCCEEEEeCCCchhhHHHHHHcCCE-EE------------EeecCCccCCC-------------C
Confidence            987663        34578999999998754322222211 10            0000  00000             1


Q ss_pred             HHHHHHHHHHHhCCCcEEEE-EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee-cccCCCC
Q 010250          256 LANNLEDLILKEGPETIAAF-IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKYSIKP  333 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aav-ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~-~~~gv~p  333 (514)
                      +.+++++.+.    +++.++ ++.| ++.+|. ..+++.+++|.++|++||+++|+||+|..|...+....+ ...+..+
T Consensus       143 d~~~l~~~~~----~~~~~v~~~~p-~NPtG~-~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~  216 (378)
T PRK07682        143 QPAQIEAAIT----AKTKAILLCSP-NNPTGA-VLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAYTSFASIKGMRE  216 (378)
T ss_pred             CHHHHHhhcC----cccEEEEEECC-CCCcCc-CcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCCCChhhcccccC
Confidence            2466666553    234445 5555 666675 446788999999999999999999999988655432111 1122222


Q ss_pred             c---hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccHHHHHHHHH
Q 010250          334 D---LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIA  408 (514)
Q Consensus       334 D---iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~~~~~~~~~  408 (514)
                      .   +.+|||.++..++++|++++++++++.+...       ....+++.+++++.++.++|+..+  -++..+.++++.
T Consensus       217 ~~i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~-------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~  289 (378)
T PRK07682        217 RTILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKI-------HQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRR  289 (378)
T ss_pred             CEEEEecCcccccChhhhhhhhhcCHHHHHHHHHH-------HHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHH
Confidence            2   3368999873238999999999999988642       112345567788888887775321  123456677888


Q ss_pred             HHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEEe
Q 010250          409 PKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMMS  479 (514)
Q Consensus       409 ~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi~  479 (514)
                      +.+.+.|+++ ...   ...+. |.++++.+.....          ....+...++ ++||.+.++       .+++||+
T Consensus       290 ~~~~~~L~~~-~~~---~~~p~g~~~~~~~~~~~~~----------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis  355 (378)
T PRK07682        290 NFFVTSFNEI-GLT---CHVPGGAFYAFPSISSTGL----------SSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCS  355 (378)
T ss_pred             HHHHHHHHHC-CCc---cCCCCeeEEEEEeccCCCC----------CHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEE
Confidence            8888888775 211   12233 3445555532111          1345777765 789999864       2569999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                        +..+++++++++++|+++++++
T Consensus       356 --~~~~~~~l~~~l~~l~~~l~~~  377 (378)
T PRK07682        356 --YATSLEQLQEAMKRMKRFVENK  377 (378)
T ss_pred             --eCCCHHHHHHHHHHHHHHHhhc
Confidence              5668999999999999988653

>PRK06108 aspartate aminotransferase; Provisional

Probab=99.88  E-value=2.5e-20  Score=192.19  Aligned_cols=339  Identities=14%  Similarity=0.102  Sum_probs=210.5

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHHHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQV  179 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~~Al  179 (514)
                      .++||..|..  .++ .++.+.+++.+.+.+....+....+..+....+++.+.+.++ ....+++++++||++|+..++
T Consensus        25 ~~i~l~~g~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~  101 (382)
T PRK06108         25 GVLPLWFGES--DLP-TPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAA  101 (382)
T ss_pred             CeEEecCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHH
Confidence            4688877753  243 478899999988765322111112344555666666665543 245679999999999999998


Q ss_pred             HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250          180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN  259 (514)
Q Consensus       180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (514)
                      +...        ..++.|++.+++|.......... |...            ..++...      .+   ..+ ..+.++
T Consensus       102 ~~l~--------~~gd~vl~~~p~y~~~~~~~~~~-g~~~------------~~v~~~~------~~---~~~-~~d~~~  150 (382)
T PRK06108        102 QALV--------GPGDEVVAVTPLWPNLVAAPKIL-GARV------------VCVPLDF------GG---GGW-TLDLDR  150 (382)
T ss_pred             HHhc--------CCCCEEEEeCCCccchHHHHHHC-CCEE------------EEeeCCC------CC---CCc-cCCHHH
Confidence            8663        23467999999987653222111 1111            0011100      00   000 011466


Q ss_pred             HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc-cccc-e-ecccCCCCch-
Q 010250          260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL-GTMF-G-CDKYSIKPDL-  335 (514)
Q Consensus       260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~-G~~~-~-~~~~gv~pDi-  335 (514)
                      +++.+.    .++.++++...++.+|.+. +.+.+++|.++|++||+++|+||+|.+|... +... . .......+.+ 
T Consensus       151 l~~~~~----~~~~~i~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i  225 (382)
T PRK06108        151 LLAAIT----PRTRALFINSPNNPTGWTA-SRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRII  225 (382)
T ss_pred             HHHhcC----ccceEEEEECCCCCCCccc-CHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEE
Confidence            666553    2344555555566677654 6789999999999999999999999987433 2111 1 1111111222 


Q ss_pred             --hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHH
Q 010250          336 --VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKF  411 (514)
Q Consensus       336 --v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l  411 (514)
                        .+|||.++.+++++|++++++++++.+...       ....+++.+++.+.++.++|+...+  +++.++++++.+.+
T Consensus       226 ~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l  298 (382)
T PRK06108        226 FVNSFSKNWAMTGWRLGWLVAPPALGQVLEKL-------IEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHL  298 (382)
T ss_pred             EEeechhhccCcccceeeeeCCHHHHHHHHHH-------HHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence              268998864338999999999998888631       1223456678888888888763211  34567777788888


Q ss_pred             HhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEEeCCC
Q 010250          412 QDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMMSPPF  482 (514)
Q Consensus       412 ~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi~p~~  482 (514)
                      .+.|+++..   +....+. |.++++.+.+..           ....++..|+ ++||.+.++       .+.+|++...
T Consensus       299 ~~~L~~~~~---~~~~~p~~g~~~~~~l~~~~-----------~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~  364 (382)
T PRK06108        299 VDALRALPG---VEVAKPDGAMYAFFRIPGVT-----------DSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR  364 (382)
T ss_pred             HHHHHhCCC---CcccCCCeeEEEEEeCCCCC-----------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC
Confidence            888876522   2222233 445566665321           1345777765 579999763       2469999654


Q ss_pred             CCCHHHHHHHHHHHHHHHH
Q 010250          483 IMSPEEVDELISKYGKALK  501 (514)
Q Consensus       483 ~~t~e~id~~~~~l~~~l~  501 (514)
                        +++++++++++|.++++
T Consensus       365 --~~~~l~~~l~~l~~~l~  381 (382)
T PRK06108        365 --DPARLDEAVERLRRFLA  381 (382)
T ss_pred             --CHHHHHHHHHHHHHHHh
Confidence              99999999999988764

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=99.88  E-value=2.1e-20  Score=191.77  Aligned_cols=324  Identities=16%  Similarity=0.192  Sum_probs=208.7

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT  177 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~  177 (514)
                      ++++++||.++.  +++| .+|.+.+++.+.+.....|      +.....++.+.++++++ .+.+++++++++++++..
T Consensus        30 ~~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~y------~~~~~~~lr~~ia~~~~-~~~~~i~~t~G~~~~l~~   99 (367)
T PRK02731         30 GIADIIKLASNE--NPLG-PSPKAIEAIRAAADELHRY------PDGSGFELKAALAEKFG-VDPERIILGNGSDEILEL   99 (367)
T ss_pred             CCCceEEecCCC--CCCC-CCHHHHHHHHHHHHhhcCC------CCCcHHHHHHHHHHHhC-cCHHHEEEcCCHHHHHHH
Confidence            678899998874  4577 5788999999887653322      11223578888888874 345789999999998877


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      ++....        ..++.|++.+++|.+....... .|....            .++.. .|.             .++
T Consensus       100 ~~~~l~--------~~gd~vl~~~p~y~~~~~~~~~-~g~~~~------------~~~~~-~~~-------------~~~  144 (367)
T PRK02731        100 LARAYL--------GPGDEVIYSEHGFAVYPIAAQA-VGAKPV------------EVPAK-DYG-------------HDL  144 (367)
T ss_pred             HHHHhc--------CCCCEEEEecCCHHHHHHHHHH-cCCeEE------------Eeccc-CCC-------------CCH
Confidence            766542        2346899999998765432221 121110            11110 000             114


Q ss_pred             HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh--cCCEEEEechhcCcccccc-cceecccCCCCc
Q 010250          258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK--YDILFIADEVICAFGRLGT-MFGCDKYSIKPD  334 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~--~gillI~DEv~tG~gr~G~-~~~~~~~gv~pD  334 (514)
                      +++++.+.    +++.+|++...++.+|.+.+    ++++.++|+.  +|+++|+||+|..+...+. .......+..++
T Consensus       145 ~~l~~~~~----~~~~~v~l~~p~nptG~~~~----~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~  216 (367)
T PRK02731        145 DAMLAAVT----PRTRLVFIANPNNPTGTYLP----AEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPN  216 (367)
T ss_pred             HHHHHHhC----CCCcEEEEeCCCCCCCcCCC----HHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCC
Confidence            66666653    23455555666677787776    4556666655  4999999999987654332 122233333345


Q ss_pred             hh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHH
Q 010250          335 LV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPK  410 (514)
Q Consensus       335 iv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~  410 (514)
                      ++   +|||.++.+++++|++++++++++.+...         ..++..+++++.++.++|+..+ -++..+..+++.+.
T Consensus       217 ~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~---------~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~  287 (367)
T PRK02731        217 VVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRV---------RQPFNVNSLALAAAVAALDDDAFVEKSRALNAEGMAW  287 (367)
T ss_pred             EEEEeeehHhhcCcccceeeeeCCHHHHHHHHHc---------cCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence            54   68998874338999999999999888742         1245567788888877775211 12345556666677


Q ss_pred             HHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-----CEEEEeCCCCCC
Q 010250          411 FQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMS  485 (514)
Q Consensus       411 l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-----~~iRi~p~~~~t  485 (514)
                      +.+.|++. ....   ..+.|.++++.+.+..           ....+.+.|.++||.++++.     +.||+++   .+
T Consensus       288 l~~~L~~~-g~~~---~~~~g~~~~i~~~~~~-----------~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~---~~  349 (367)
T PRK02731        288 LTEFLAEL-GLEY---IPSVGNFILVDFDDGK-----------DAAEAYQALLKRGVIVRPVAGYGLPNALRITI---GT  349 (367)
T ss_pred             HHHHHHHC-CCcc---CCCCceEEEEECCCCC-----------CHHHHHHHHHHCCEEEEeCCCCCCCCeEEEec---CC
Confidence            77777665 2211   2345788888873321           14568889999999998752     4799994   47


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010250          486 PEEVDELISKYGKALK  501 (514)
Q Consensus       486 ~e~id~~~~~l~~~l~  501 (514)
                      .++++++++.|+++++
T Consensus       350 ~~e~~~l~~aL~~~~~  365 (367)
T PRK02731        350 EEENRRFLAALKEFLA  365 (367)
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            8999999999988764

>PRK07324 transaminase; Validated

Probab=99.88  E-value=1.2e-20  Score=193.75  Aligned_cols=336  Identities=14%  Similarity=0.114  Sum_probs=208.5

Q ss_pred             EeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHH
Q 010250           95 YDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEA  174 (514)
Q Consensus        95 ~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA  174 (514)
                      ++..|..++++..|   -+.-..++.+ +|+.+++......+.    ......+|.+.+++++...+.++|++++|+++|
T Consensus        21 ~~~~~~~~~~~~~~---e~~~~~~~~~-~~~~~~~~~~~~~Y~----~~~G~~~lr~~ia~~~~~~~~~~vi~t~G~~~a   92 (373)
T PRK07324         21 YDIAESCIDSLTLE---ELLALAGKNP-EAFYQELGQKKLTYG----WIEGSPEFKEAVASLYQNVKPENILQTNGATGA   92 (373)
T ss_pred             cccccCCCCCCcHH---HHHhccCcch-HHHHHHHhcCCccCC----CCCCCHHHHHHHHHHhcCCChhhEEEcCChHHH
Confidence            55566666666544   2222256667 888888776432211    222345788888887644456899999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEY  252 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  252 (514)
                      +..++....        ..+++|++..++|..........+...             ..++..  ..|.           
T Consensus        93 l~~~~~~l~--------~~gd~Vl~~~P~y~~~~~~~~~~g~~v-------------~~v~~~~~~~~~-----------  140 (373)
T PRK07324         93 NFLVLYALV--------EPGDHVISVYPTYQQLYDIPESLGAEV-------------DYWQLKEENGWL-----------  140 (373)
T ss_pred             HHHHHHHhC--------CCCCEEEEcCCCchhHHHHHHHcCCEE-------------EEEecccccCCC-----------
Confidence            999987663        335689999999876532222211111             011110  0000           


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC
Q 010250          253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK  332 (514)
Q Consensus       253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~  332 (514)
                        .+.+++++++.    +++.+|++...++.+|.+. +++.+++|.++|++||+++|+||+|.++...+.....  ....
T Consensus       141 --~d~~~l~~~~~----~~~kli~i~~p~NPtG~~~-~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~--~~~~  211 (373)
T PRK07324        141 --PDLDELRRLVR----PNTKLICINNANNPTGALM-DRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSI--ADLY  211 (373)
T ss_pred             --CCHHHHHHhCC----CCCcEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCCh--hhcc
Confidence              01356665543    2345566655566667554 5788999999999999999999999987554321111  1112


Q ss_pred             Cc---hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHH
Q 010250          333 PD---LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKI  407 (514)
Q Consensus       333 pD---iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~  407 (514)
                      +.   +-+|||.++..++++|++++++++++.+...       ....+++.++++..++..+|+..++  +...+.++++
T Consensus       212 ~~~I~~~s~SK~~~~~G~RiG~i~~~~~li~~~~~~-------~~~~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~  284 (373)
T PRK07324        212 EKGISTNSMSKTYSLPGIRVGWIAANEEVIDILRKY-------RDYTMICAGVFDDMLASLALEHRDAILERNRKIVRTN  284 (373)
T ss_pred             CCEEEEecchhhcCCccceeEEEecCHHHHHHHHHH-------hCcEEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence            22   3378998874339999999999999888742       2223566777888777777753211  1233444555


Q ss_pred             HHHHHhhhhhccCCCceeEEEeeee-eEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeC-----CEEEEeC
Q 010250          408 APKFQDGVKAFSDSPIIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-----DNIMMSP  480 (514)
Q Consensus       408 ~~~l~~~L~~l~~~~~~~~v~g~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g-----~~iRi~p  480 (514)
                      .+.+.+.|++.   +.+..+.+.|. +..+.+....           ....++.+|+ +.||++.|+.     +.+||+ 
T Consensus       285 ~~~l~~~l~~~---~~~~~~~p~gg~~~~i~~~~~~-----------~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis-  349 (373)
T PRK07324        285 LAILDEWVAKE---PRVSYVKPKAVSTSFVKLDVDM-----------PSEDFCLKLLKETGVLLVPGNRFDLEGHVRIG-  349 (373)
T ss_pred             HHHHHHHHhcC---CCceEECCCceEEEEEEeCCCC-----------CHHHHHHHHHHhcCEEEECccccCCCCeEEEE-
Confidence            55565655543   33334444443 3445553211           1345777765 6799999863     579999 


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHH
Q 010250          481 PFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       481 ~~~~t~e~id~~~~~l~~~l~~  502 (514)
                       +..+++.+.+++++|.+++++
T Consensus       350 -~~~~~~~l~~~l~rl~~~l~~  370 (373)
T PRK07324        350 -YCCDTETLKKGLKKLSEFLRE  370 (373)
T ss_pred             -ecCCHHHHHHHHHHHHHHHHh
Confidence             677899999999999998865

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=99.87  E-value=4.5e-20  Score=189.48  Aligned_cols=326  Identities=16%  Similarity=0.135  Sum_probs=198.7

Q ss_pred             CCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCc
Q 010250          115 GGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK  194 (514)
Q Consensus       115 Gh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~  194 (514)
                      -|.+|.+++++.+++......+..+.+......++++.++++++. +.+.++|++||++|+..+++.++..    ...++
T Consensus        30 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~-~~~~~~~~~ggt~a~~~a~~~~~~~----~~~~~  104 (371)
T PRK13520         30 TEPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHL-PDAYGYITSGGTEANIQAVRAARNL----AKAEK  104 (371)
T ss_pred             cCchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCC-CCCCeEEecCcHHHHHHHHHHHHhh----ccCCC
Confidence            358999999999988753222222223344456888999998852 3346889999999999999988632    11234


Q ss_pred             cEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEE
Q 010250          195 KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAA  274 (514)
Q Consensus       195 ~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aa  274 (514)
                      ++||+.+.++...... ....|..            +..++.+..+             ..+.++|++.+.+   +....
T Consensus       105 ~~vl~~~~~h~s~~~~-~~~~g~~------------~~~v~~~~~~-------------~~d~~~l~~~i~~---~~~~v  155 (371)
T PRK13520        105 PNIVVPESAHFSFDKA-ADMLGVE------------LRRAPLDDDY-------------RVDVKAVEDLIDD---NTIGI  155 (371)
T ss_pred             ceEEecCcchHHHHHH-HHHcCce------------EEEecCCCCC-------------cCCHHHHHHHHhh---CCEEE
Confidence            5787777665443211 1111111            1111111100             1125778887752   23334


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc----cccccceecccCCCCchhchh--hhhcCCccc
Q 010250          275 FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG----RLGTMFGCDKYSIKPDLVSFA--KALSSAYMP  348 (514)
Q Consensus       275 vivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g----r~G~~~~~~~~gv~pDiv~~s--K~l~gG~~p  348 (514)
                      +++.+ ++++|.+.|    +++|.++|++||+++|+||+|+++.    +.+..+.....  ..|.++++  |.+.+| +|
T Consensus       156 i~~~~-~~~tG~~~~----l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~--~vd~~~~s~~K~~~a~-~~  227 (371)
T PRK13520        156 VGIAG-TTELGQVDP----IPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLP--GVDSITIDPHKMGLAP-IP  227 (371)
T ss_pred             EEEcC-CcCCcccCC----HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCC--CCceEEECCccccCcc-CC
Confidence            44444 566788877    9999999999999999999998652    11111111122  23555443  643334 78


Q ss_pred             ceeEEe-CHHHHHHhhhccCCCC---cccccCCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhccCC
Q 010250          349 IGAILV-SPEVSEVIHSQSNTLG---SFSHGFTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFSDS  421 (514)
Q Consensus       349 ig~v~~-~~~i~~~l~~~~~~~~---~~~~~~t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~  421 (514)
                      +|+++. ++++++.+........   .+.+.+|.+  +..++++.++|+.+.++   +..++..++++++++.|+++ ..
T Consensus       228 ~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~--~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~  304 (371)
T PRK13520        228 AGGILFRDESYLDALAVDTPYLTSKKQATLTGTRS--GAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GF  304 (371)
T ss_pred             ceEEEEcCHHHHHhhcccCccccCCCCcceEeecc--ChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CC
Confidence            988876 5567776642110000   011122332  34567777888876544   36788888999999988875 32


Q ss_pred             CceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--CEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250          422 PIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       422 ~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--~~iRi~p~~~~t~e~id~~~~~l~~~  499 (514)
                      .++  ......++.+.+.+              ...+.+.|.++|+.+....  +.+|++++..+|++||+++++.|+++
T Consensus       305 ~~~--~~~~~~~v~~~~~~--------------~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~  368 (371)
T PRK13520        305 EPV--IEPVLNIVAFDDPN--------------PDEVREKLRERGWRVSVTRCPEALRIVCMPHVTREHIENFLEDLKEV  368 (371)
T ss_pred             EEe--cCCCceEEEEecCC--------------HHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
Confidence            211  11223355554431              3457788999999988653  56999988889999999999999987


Q ss_pred             HH
Q 010250          500 LK  501 (514)
Q Consensus       500 l~  501 (514)
                      ++
T Consensus       369 ~~  370 (371)
T PRK13520        369 KK  370 (371)
T ss_pred             hh
Confidence            64

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=99.87  E-value=3e-20  Score=189.02  Aligned_cols=316  Identities=16%  Similarity=0.208  Sum_probs=203.7

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV  179 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al  179 (514)
                      .+.|||.+|.  +.++ .+|++++|+.+++.....+      +.....++.+.++++++ .+.+++++++++++++..++
T Consensus        19 ~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~y------~~~~~~~lr~~ia~~~~-~~~~~i~~~~G~~~~l~~~~   88 (346)
T TIGR01141        19 KEVIKLNSNE--NPFG-PPPKAKEALRAEADKLHRY------PDPDPAELKQALADYYG-VDPEQILLGNGSDEIIELLI   88 (346)
T ss_pred             CceEEccCCC--CCCC-CCHHHHHHHHHhHHHhhcC------CCCCHHHHHHHHHHHhC-cChHHEEEcCCHHHHHHHHH
Confidence            4799998774  3566 5889999999887543222      11223678888888874 34578999999999998887


Q ss_pred             HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250          180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN  259 (514)
Q Consensus       180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (514)
                      +...        .++++|++.+++|......... .|...            ..++....+             ..+.+.
T Consensus        89 ~~l~--------~~gd~v~~~~p~y~~~~~~~~~-~g~~~------------~~~~~~~~~-------------~~d~~~  134 (346)
T TIGR01141        89 RAFL--------EPGDAVLVPPPTYSMYEISAKI-HGAEV------------VKVPLDEDG-------------QLDLED  134 (346)
T ss_pred             HHhc--------CCCCEEEEcCCCHHHHHHHHHH-cCCeE------------EEeccCCCC-------------CCCHHH
Confidence            7652        2346899999888543221111 11111            111111000             011455


Q ss_pred             HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc--CCEEEEechhcCcccccccceecccCCCCchh-
Q 010250          260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY--DILFIADEVICAFGRLGTMFGCDKYSIKPDLV-  336 (514)
Q Consensus       260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~--gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv-  336 (514)
                      +++.+   . +++++|++...++.+|.+.+    ++++.++|+.+  |+++|+||+|.++...+...  ......++++ 
T Consensus       135 l~~~~---~-~~~~~v~l~~p~NptG~~~~----~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~--~~~~~~~~~i~  204 (346)
T TIGR01141       135 ILVAI---D-DKPKLVFLCSPNNPTGNLLS----RSDIEAVLERTPEDALVVVDEAYGEFSGEPSTL--PLLAEYPNLIV  204 (346)
T ss_pred             HHHhc---C-CCCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCCCcEEEEECchhhhcCCccHH--HHHhhCCCEEE
Confidence            65543   2 34566666666777888876    56666666665  99999999998774322111  1111223433 


Q ss_pred             --chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Q 010250          337 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQD  413 (514)
Q Consensus       337 --~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~  413 (514)
                        ++||.++.+++++|++++++++.+.+...         ..+++.+++++.++.++++... -++..++++++.+++++
T Consensus       205 ~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~  275 (346)
T TIGR01141       205 LRTLSKAFGLAGLRIGYAIANAEIIDALNKV---------RAPFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYD  275 (346)
T ss_pred             EehhhHhhhchhhhceeeecCHHHHHHHHhc---------cCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence              68899865348999999999998888641         1245667888888877775432 23456777777888888


Q ss_pred             hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC------CEEEEeCCCCCCHH
Q 010250          414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------DNIMMSPPFIMSPE  487 (514)
Q Consensus       414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g------~~iRi~p~~~~t~e  487 (514)
                      .|+++..   +......|.++++++.. .            .+.+.+.|.++||.+.++.      +.+|+++   .+++
T Consensus       276 ~L~~~~g---~~~~~~~g~~~~~~~~~-~------------~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~---~~~~  336 (346)
T TIGR01141       276 GLKKLPG---LEVYPSDANFVLIRFPR-D------------ADALFEALLEKGIIVRDLNSYPGLPNCLRITV---GTRE  336 (346)
T ss_pred             HHHhcCC---CEECCCcCCEEEEecCC-C------------HHHHHHHHHHCCeEEEeCCCcCCCCCeEEEec---CCHH
Confidence            8876522   22223356777777653 1            3567889999999998752      5699994   3899


Q ss_pred             HHHHHHHHHH
Q 010250          488 EVDELISKYG  497 (514)
Q Consensus       488 ~id~~~~~l~  497 (514)
                      |++++++.|+
T Consensus       337 ~i~~~~~~l~  346 (346)
T TIGR01141       337 ENDRFLAALR  346 (346)
T ss_pred             HHHHHHHHhC
Confidence            9999998763

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=99.87  E-value=2.6e-20  Score=190.51  Aligned_cols=318  Identities=14%  Similarity=0.114  Sum_probs=200.9

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV  179 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al  179 (514)
                      ..++||.+|.  +.+| .+|.+.+++.++++...++      +.....++.+.+++++. .+.+++++++++++++..++
T Consensus        29 ~~~i~l~~n~--~~~~-~~~~v~~a~~~~~~~~~~~------p~~g~~~lr~~ia~~~~-~~~~~i~~t~G~~~~l~~~~   98 (359)
T PRK03158         29 EKIVKLASNE--NPYG-PSPKVKEAIAAHLDELALY------PDGYAPELRTKVAKHLG-VDEEQLLFGAGLDEVIQMIS   98 (359)
T ss_pred             CceEEecCCC--CCCC-CCHHHHHHHHHHHHHhhcC------CCCcHHHHHHHHHHHhC-CCHHHEEECCCHHHHHHHHH
Confidence            3689998875  3477 4889999999888654322      22335677888888773 34578999999999998887


Q ss_pred             HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250          180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN  259 (514)
Q Consensus       180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (514)
                      +...        ..++.|++.+++|++....+... |...            ..+++. .+.             .++++
T Consensus        99 ~~~~--------~~gd~v~~~~p~y~~~~~~~~~~-g~~~------------~~~~~~-~~~-------------~d~~~  143 (359)
T PRK03158         99 RALL--------NPGTNTVMAEPTFSQYRHNAIIE-GAEV------------REVPLK-DGG-------------HDLEA  143 (359)
T ss_pred             HHHh--------CCCCEEEEcCCCHHHHHHHHHHc-CCeE------------EEEecC-CCC-------------cCHHH
Confidence            7653        33568999999998864322211 1111            111111 000             01355


Q ss_pred             HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh--cCCEEEEechhcCcccccc-cceecccCCCCc-h
Q 010250          260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK--YDILFIADEVICAFGRLGT-MFGCDKYSIKPD-L  335 (514)
Q Consensus       260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~--~gillI~DEv~tG~gr~G~-~~~~~~~gv~pD-i  335 (514)
                      +++.+.    +++.++++...++++|.+.+    .+++.++++.  +|+++|+||+|..|-..+. .......+-.+. +
T Consensus       144 l~~~~~----~~~~~v~i~~p~NPtG~~~~----~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi  215 (359)
T PRK03158        144 MLKAID----EQTKIVWICNPNNPTGTYVN----HEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLI  215 (359)
T ss_pred             HHHhcC----CCCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEE
Confidence            555442    24455555555788888776    3445555544  6999999999987632221 111111111122 2


Q ss_pred             h--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHH
Q 010250          336 V--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQ  412 (514)
Q Consensus       336 v--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~  412 (514)
                      +  +|||.++..++++|++++++++++.+...         ..+++.+++++.++.++|+.-. .+...+..+++.+.+.
T Consensus       216 ~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~---------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~  286 (359)
T PRK03158        216 VLRTFSKAYGLAALRVGYGIASEELIEKLNIA---------RPPFNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYY  286 (359)
T ss_pred             EEEechHhhcCcchhhehhcCCHHHHHHHHHh---------cCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence            2  79999984338999999999999888641         1246778899999988885211 1123344455555565


Q ss_pred             hhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCHH
Q 010250          413 DGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSPE  487 (514)
Q Consensus       413 ~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~e  487 (514)
                      +.|++.   + +...++.|.++++.+..+             ...+.+.|+++||.+.++     .++|||+   ..+++
T Consensus       287 ~~l~~~---~-~~~~~~~g~~i~~~~~~~-------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~---~~~~~  346 (359)
T PRK03158        287 AFCKEY---G-LFYYPSQTNFIFVDTGRD-------------ANELFEALLKKGYIVRSGAALGFPTGVRIT---IGLKE  346 (359)
T ss_pred             HHHHHC---C-CeeCCCcCcEEEEECCCC-------------HHHHHHHHHHCCeEEeeCCCCCCCCeEEEe---cCCHH
Confidence            655543   2 222344577777766311             345778889999999984     3579999   45899


Q ss_pred             HHHHHHHHHHHH
Q 010250          488 EVDELISKYGKA  499 (514)
Q Consensus       488 ~id~~~~~l~~~  499 (514)
                      ++++++++|+++
T Consensus       347 ~~~~l~~al~~~  358 (359)
T PRK03158        347 QNDKIIELLKEL  358 (359)
T ss_pred             HHHHHHHHHHHh
Confidence            999999999875

>PLN00175 aminotransferase family protein; Provisional

Probab=99.86  E-value=2.2e-19  Score=186.66  Aligned_cols=338  Identities=12%  Similarity=0.055  Sum_probs=208.4

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCC-eEEEeCChhHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMA-KVFFTNSGSEANDT  177 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~-~v~~~~sGseA~~~  177 (514)
                      ...|||..|...  +. .++.+.+++.+.+++....+....+..+....+++.+.+.++- .+.+ ++++++|+++|+..
T Consensus        54 ~~~i~l~~G~P~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~  130 (413)
T PLN00175         54 HGAINLGQGFPN--FD-GPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAA  130 (413)
T ss_pred             CCeEecCCCCCC--CC-CCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHH
Confidence            357898877542  22 4788899998888752111111122333444455555443321 2334 69999999999998


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRL  256 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  256 (514)
                      ++....        ..++.|++.+++|.+........+....             .++.. +.|.             .+
T Consensus       131 ~~~~l~--------~~gd~Vlv~~P~y~~~~~~~~~~g~~~~-------------~v~~~~~~~~-------------~~  176 (413)
T PLN00175        131 TILGLI--------NPGDEVILFAPFYDSYEATLSMAGAKIK-------------TVTLRPPDFA-------------VP  176 (413)
T ss_pred             HHHHhC--------CCCCEEEEeCCCchhHHHHHHHcCCEEE-------------EEECCcccCC-------------CC
Confidence            887543        3357899999999776432222211110             11110 0011             11


Q ss_pred             HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecccCCCCch
Q 010250          257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPDL  335 (514)
Q Consensus       257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~~gv~pDi  335 (514)
                      +++|++.+.    .++.+|++...++.+|.+. +++.+++|.++|++||+++|+||+|..+...+.... .+..+..+.+
T Consensus       177 ~~~l~~~~~----~~~k~i~i~~p~NPtG~~~-s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~s~~~~~~~~~~v  251 (413)
T PLN00175        177 EDELKAAFT----SKTRAILINTPHNPTGKMF-TREELELIASLCKENDVLAFTDEVYDKLAFEGDHISMASLPGMYERT  251 (413)
T ss_pred             HHHHHHhcC----cCceEEEecCCCCCCCcCC-CHHHHHHHHHHHHHcCcEEEEecccCccccCCcccChhhCCCCcCcE
Confidence            466766663    2355666666667777654 678999999999999999999999987743332211 1222222222


Q ss_pred             h---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHH
Q 010250          336 V---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPK  410 (514)
Q Consensus       336 v---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~  410 (514)
                      +   +|||.++..++++|++++++++++.+...       ....+++.+++.+.++.++|+..+.  ++..+.++++.+.
T Consensus       252 i~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~-------~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~  324 (413)
T PLN00175        252 VTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQA-------HSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDI  324 (413)
T ss_pred             EEEecchhhccCcchheeeeEeCHHHHHHHHHH-------HhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence            2   68999874339999999999998888631       1223567777888888777753211  3456677778888


Q ss_pred             HHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee----------CCEEEE
Q 010250          411 FQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS----------GDNIMM  478 (514)
Q Consensus       411 l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~----------g~~iRi  478 (514)
                      +.+.|++. ...   ..... |.++++.+......         ....++..|+ ++||.+.|+          .+.|||
T Consensus       325 l~~~L~~~-g~~---~~~p~g~~f~~~~~~~~~~~---------~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRl  391 (413)
T PLN00175        325 LVEGLKEV-GFK---VYPSSGTYFVMVDHTPFGFE---------NDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRF  391 (413)
T ss_pred             HHHHHHHC-CCe---ecCCCeeEEEEEeccccCCC---------CHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEE
Confidence            88888765 211   12233 44566665321100         1345777776 569998864          136999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      +  +..+++++++++++|.+.++
T Consensus       392 s--~~~~~e~l~~~~~rL~~~~~  412 (413)
T PLN00175        392 A--FCKDEETLRAAVERMKTKLK  412 (413)
T ss_pred             E--EcCCHHHHHHHHHHHHHHHh
Confidence            9  56789999999999998765

>PLN02721 threonine aldolase

Probab=99.86  E-value=1.3e-19  Score=184.81  Aligned_cols=335  Identities=17%  Similarity=0.141  Sum_probs=200.1

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHH-HhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQ-LNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV  179 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~-l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al  179 (514)
                      +++||.++.+.    ..+|.+.+|+.+. ......      ++.+...++++.|++++.   .+.++++++|++++..++
T Consensus         6 ~~~~~~~~~~~----~~~~~~~~a~~~~~~~~~~~------~~~~~~~~l~~~la~~~~---~~~~~~~~~Gs~a~~~~l   72 (353)
T PLN02721          6 RVVDLRSDTVT----KPTDAMRAAMANAEVDDDVL------GYDPTALRLEEEMAKIFG---KEAALFVPSGTMGNLISV   72 (353)
T ss_pred             hhhhhhccccc----CCCHHHHHHHHhccCCCccc------CCCHHHHHHHHHHHHHhC---CceeEEecCccHHHHHHH
Confidence            56788888654    2688999998764 221111      134456899999999983   456899999999998887


Q ss_pred             HHHHHHHhhcCCCCccEEEEEecCCcccce-e-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          180 KLVWYYNNALGRPNKKKFIARQKSYHGSTL-I-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~-~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      ....       ..+++.|++.+++|..... + .....|...            ..++....+             ..++
T Consensus        73 ~~~~-------~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~-------------~~d~  120 (353)
T PLN02721         73 LVHC-------DVRGSEVILGDNSHIHLYENGGISTLGGVHP------------RTVKNNEDG-------------TMDL  120 (353)
T ss_pred             HHHc-------cCCCCeEEEcCccceehhcccchhhhcCcee------------EecCCCcCC-------------CcCH
Confidence            7653       1135678888887632211 0 111111110            001110000             0125


Q ss_pred             HHHHHHHHHhC---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceecccCCCC
Q 010250          258 NNLEDLILKEG---PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDKYSIKP  333 (514)
Q Consensus       258 ~~le~li~~~~---~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~~gv~p  333 (514)
                      +++++.+.+..   .+++++|++++++++.|...++.+.+++|.++|++||+++|+||++. ++-.... ..........
T Consensus       121 ~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~-~~~~~~~~~~~~~~~~~~  199 (353)
T PLN02721        121 DAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARI-FNASVALGVPVHRLVKAA  199 (353)
T ss_pred             HHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhh-hcchhhhCCCHHHHhhhC
Confidence            77777775321   13578899988766543345567889999999999999999999986 4321100 0011111123


Q ss_pred             c--hhchhhhhcCCccccee-EEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Q 010250          334 D--LVSFAKALSSAYMPIGA-ILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPK  410 (514)
Q Consensus       334 D--iv~~sK~l~gG~~pig~-v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~  410 (514)
                      |  +++++|++++   |+|+ +++++++++.+....    ....+ +....+..+++++.+++...+  ..++..++.++
T Consensus       200 d~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~  269 (353)
T PLN02721        200 DSVSVCLSKGLGA---PVGSVIVGSKSFIRKAKRLR----KTLGG-GMRQVGVLAAAALVALQENVP--KLEDDHKKAKL  269 (353)
T ss_pred             CEEEEecccccCC---ceeeEEecCHHHHHhHHHHH----HhcCC-CeehhHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence            4  3468899874   5665 567888887764311    00111 111112334444555543222  23344566778


Q ss_pred             HHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHH
Q 010250          411 FQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEV  489 (514)
Q Consensus       411 l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~i  489 (514)
                      +.+.|+++..... ......+.++.+.+..... .        ....+++.|.++|+.+.+.+ ..||+++++.++++|+
T Consensus       270 l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~L~~~gi~v~~~~~~~lR~~~~~~~~~~~i  339 (353)
T PLN02721        270 LAEGLNQIKGLRV-NVAAVETNIVYFDITDGSR-I--------TAEKLCKSLEEHGVLLMPGNSSRIRVVTHHQISDSDV  339 (353)
T ss_pred             HHHHHHhCCCcEE-ecCCccceEEEEEccCCcc-c--------cHHHHHHHHHhCCcEEecCCCceEEEEecCcCCHHHH
Confidence            8888876622211 0112234567777653210 0        14568899999999999876 5699999989999999


Q ss_pred             HHHHHHHHHHHH
Q 010250          490 DELISKYGKALK  501 (514)
Q Consensus       490 d~~~~~l~~~l~  501 (514)
                      ++++++|++++.
T Consensus       340 ~~~~~~l~~~~~  351 (353)
T PLN02721        340 QYTLSCFQQAAL  351 (353)
T ss_pred             HHHHHHHHHHhh
Confidence            999999998765

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=99.86  E-value=1.3e-19  Score=182.81  Aligned_cols=321  Identities=18%  Similarity=0.266  Sum_probs=220.0

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVK  180 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk  180 (514)
                      ..+|+.+|-  +++| .+|++.+++.+.++.+..|      +.....++.+.+++.+.....+.|+.+|+.+|.+...++
T Consensus        23 ~~i~LssNe--nP~g-p~~~~~~~~~~~~~~~~rY------Pd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~   93 (356)
T COG0079          23 GIIKLSSNE--NPYG-PPPKVIEAIRAALDKLNRY------PDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVR   93 (356)
T ss_pred             cceeecCCC--CCCC-CCHHHHHHHHHHHHhhccC------CCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHH
Confidence            689988875  7788 4589999998888754433      334567888999888753556799999999999999998


Q ss_pred             HHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHH
Q 010250          181 LVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL  260 (514)
Q Consensus       181 ~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  260 (514)
                      +..        .++++|++..++|.-+...+...+...             ..++..+ |+                .|+
T Consensus        94 ~~~--------~~gd~vl~~~Ptf~~Y~~~a~~~g~~~-------------~~v~~~~-~~----------------~d~  135 (356)
T COG0079          94 AFV--------EPGDTVLIPEPTFSMYEIAAQLAGAEV-------------VKVPLKE-FR----------------LDL  135 (356)
T ss_pred             Hhh--------cCCCEEEEcCCChHHHHHHHHhcCCeE-------------EEecccc-cc----------------cCH
Confidence            875        344799999999977654444333211             1111111 11                233


Q ss_pred             HHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCc-hh---
Q 010250          261 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD-LV---  336 (514)
Q Consensus       261 e~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pD-iv---  336 (514)
                      +.++.....+....+++.|.|++|. .. +.+.++++.+.|.+ +++||+||+|..|+.  . -...... .++ ++   
T Consensus       136 ~~~~~~~~~~~~lv~i~nPNNPTG~-~~-~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~--~-~~~~l~~-~~~nlivlR  208 (356)
T COG0079         136 DAILAAIRDKTKLVFLCNPNNPTGT-LL-PREELRALLEALPE-GGLVVIDEAYIEFSP--E-SSLELLK-YPPNLIVLR  208 (356)
T ss_pred             HHHHHhhhcCCCEEEEeCCCCCCCC-CC-CHHHHHHHHHhCCC-CcEEEEeCchhhcCC--c-hhhhhcc-CCCCEEEEE
Confidence            3333322222345666777776654 33 44667777777777 999999999998855  1 1122222 334 44   


Q ss_pred             chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHhhh
Q 010250          337 SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQDGV  415 (514)
Q Consensus       337 ~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L  415 (514)
                      ||||++|-.++++|++++++++++.+...         ...|+.|.++++++.++|+.-+. +...+.+.+.++++.+.|
T Consensus       209 TfSKa~gLAGlRlGy~ia~~~~i~~l~~v---------r~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l  279 (356)
T COG0079         209 TFSKAFGLAGLRVGYAIANPELIAALNKV---------RPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAAL  279 (356)
T ss_pred             ecHHhhhcchhceeeccCCHHHHHHHHHh---------cCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHH
Confidence            79997665449999999999999999842         25778888999999998864321 345677778888888888


Q ss_pred             hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC------CEEEEeCCCCCCHHHH
Q 010250          416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------DNIMMSPPFIMSPEEV  489 (514)
Q Consensus       416 ~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g------~~iRi~p~~~~t~e~i  489 (514)
                      +.+   ++.......+.++.+++.+.           . ...+.+.|+++||+++..+      +++|++   +-|+||.
T Consensus       280 ~~~---~~~~v~pS~aNFvlv~~~~~-----------~-~~~l~~~L~~~giivR~~~~~~~~~~~lRit---vgt~een  341 (356)
T COG0079         280 KAL---GLFGVFPSQANFVLVRVPDA-----------E-AAALAEALLKKGILVRDCSSVGLLPGYLRIT---VGTPEEN  341 (356)
T ss_pred             HhC---CCCeecCCCCcEEEEECCCc-----------c-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEE---eCCHHHH
Confidence            876   21112233366666666531           1 2347789999999999764      379999   7789999


Q ss_pred             HHHHHHHHHHHHH
Q 010250          490 DELISKYGKALKA  502 (514)
Q Consensus       490 d~~~~~l~~~l~~  502 (514)
                      ++++++|.++++.
T Consensus       342 ~~ll~AL~~~~~~  354 (356)
T COG0079         342 DRLLAALREVLKG  354 (356)
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999988753

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.86  E-value=2.5e-19  Score=184.55  Aligned_cols=334  Identities=16%  Similarity=0.194  Sum_probs=203.2

Q ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-cccc---ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250          102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFW---NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT  177 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~~~---~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~  177 (514)
                      |||..+.      +.-++.|++++.+.+.....+ +...   ....+...++.+.++++++. ..++++|++||++++..
T Consensus         2 yld~aa~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~-~~~~i~~t~~~t~a~~~   74 (379)
T TIGR03402         2 YLDNNAT------TRVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGA-EPDEIIFTSGGTESDNT   74 (379)
T ss_pred             cCCCcCC------CCCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCC-CCCeEEEeCcHHHHHHH
Confidence            6776544      346789999999887542111 1110   01123456677888888853 46789999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec--CCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL--SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      +++.+....     ++++.||+....|++.......+  .|..            +..++.+..+             ..
T Consensus        75 al~~~~~~~-----~~~~~vv~~~~~~~s~~~~~~~~~~~G~~------------v~~v~~~~~g-------------~~  124 (379)
T TIGR03402        75 AIKSALAAQ-----PEKRHIITTAVEHPAVLSLCQHLEKQGYK------------VTYLPVDEEG-------------RL  124 (379)
T ss_pred             HHHHHHHhc-----CCCCeEEEcccccHHHHHHHHHHHHcCCE------------EEEEccCCCC-------------cC
Confidence            998764221     33456666665555432111111  1111            1111111100             01


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL  335 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi  335 (514)
                      +.+++++.+.    +++.++++..+++.+|.+.|    +++|.++|++||+++|+|++|+ +|..    ..+.....+|+
T Consensus       125 ~~~~l~~~i~----~~~~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~~~~-~g~~----~~~~~~~~~D~  191 (379)
T TIGR03402       125 DLEELRAAIT----DDTALVSVMWANNETGTIFP----IEEIGEIAKERGALFHTDAVQA-VGKI----PIDLKEMNIDM  191 (379)
T ss_pred             CHHHHHHhcC----CCcEEEEEEcccCCeeeccc----HHHHHHHHHHcCCEEEEECccc-cccc----ccCcccCCCCE
Confidence            2467777664    35678888888888999888    8999999999999999999997 5432    22333456799


Q ss_pred             hchh--hhhcCCcccceeEEeCHHHHHHhhhcc---CCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHH
Q 010250          336 VSFA--KALSSAYMPIGAILVSPEVSEVIHSQS---NTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIA  408 (514)
Q Consensus       336 v~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~---~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~  408 (514)
                      +++|  | +.|+ .++|+++.+++..  +.+..   .......   ....|..+..+..++++.+.+  ++..++.+++.
T Consensus       192 ~~~s~~K-~~gp-~G~g~l~v~~~~~--~~p~~~g~~~~~~~~---~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~  264 (379)
T TIGR03402       192 LSLSGHK-LHGP-KGVGALYIRKGTR--FRPLLRGGHQERGRR---AGTENVPGIVGLGKAAELATEHLEEENTRVRALR  264 (379)
T ss_pred             EEEcHHH-cCCC-CceEEEEECCCCC--CCCcccCCccCCCcC---CCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            9888  9 6654 5688888887642  22100   0000011   123345556666677776643  23456777777


Q ss_pred             HHHHhhhhh-ccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--------------
Q 010250          409 PKFQDGVKA-FSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------------  472 (514)
Q Consensus       409 ~~l~~~L~~-l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------------  472 (514)
                      +++++.|++ +....+....... +.++.+.+....            ...+...|.++||.++.+              
T Consensus       265 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~  332 (379)
T TIGR03402       265 DRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYIE------------GEAILLLLDMEGICASSGSACTSGSLEPSHVL  332 (379)
T ss_pred             HHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCCC------------HHHHHHhhccCCEEEEchhhcCCCCCCcCHHH
Confidence            888887764 4221111110001 123334333211            345777888899998742              


Q ss_pred             ----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          473 ----------GDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       473 ----------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                                .+.||++++..+|++|||++++.|+++++++.
T Consensus       333 ~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~  374 (379)
T TIGR03402       333 RAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLR  374 (379)
T ss_pred             HHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                      24699999999999999999999999887654

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>PRK06207 aspartate aminotransferase; Provisional

Probab=99.86  E-value=4.8e-19  Score=183.79  Aligned_cols=346  Identities=14%  Similarity=0.110  Sum_probs=210.0

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcCc-CCC-CeEEEeCChhHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFTA-SKM-AKVFFTNSGSEAN  175 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~~-~~~-~~v~~~~sGseA~  175 (514)
                      ++..+||..|.. ..++ .+|.+.+++.+.+.... ..+....+..+....+++.+.+.++. ... ++|++++|+++|+
T Consensus        38 ~~~~i~l~~g~~-~~~~-p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al  115 (405)
T PRK06207         38 PGRPVDFSHGDV-DAHE-PTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGAL  115 (405)
T ss_pred             CCCceecCCcCC-CCCC-CCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHH
Confidence            356678776543 2233 56789999888876532 11222223445566677777766532 244 7899999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      ..+++...        ..++.|++.+++|.+........+. ........    .   .+....|.             .
T Consensus       116 ~~~~~~l~--------~~Gd~Vlv~~P~y~~~~~~~~~~g~-~v~~v~~~----~---~~~~~~~~-------------~  166 (405)
T PRK06207        116 FLAVAATV--------ARGDKVAIVQPDYFANRKLVEFFEG-EMVPVQLD----Y---LSADKRAG-------------L  166 (405)
T ss_pred             HHHHHHhc--------CCCCEEEEeCCCchhHHHHHHHcCC-EEEEEecc----c---cCcccCCC-------------c
Confidence            99988663        3457899999999876432222211 11000000    0   00000011             1


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccCCCCc
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYSIKPD  334 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~gv~pD  334 (514)
                      ++++|++.+..   +..+.+++.| ++.+|.+. +.+.+++|.++|++||+++|+||+|..|-..|... ....+...+|
T Consensus       167 d~~~l~~~~~~---~~k~v~l~~P-~NPTG~~~-s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~  241 (405)
T PRK06207        167 DLDQLEEAFKA---GVRVFLFSNP-NNPAGVVY-SAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPE  241 (405)
T ss_pred             CHHHHHHhhhh---cCeEEEECCC-CCCCCcCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcC
Confidence            24667776642   2334556666 45556554 56789999999999999999999999774444321 1111222233


Q ss_pred             -hh---chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccHHHHHHHH
Q 010250          335 -LV---SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKI  407 (514)
Q Consensus       335 -iv---~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~~~~~~~~  407 (514)
                       ++   +|||.++ .| +++|++++++++++.+...       ......+.+.+++.++.++|+.-.  -++..+..+++
T Consensus       242 ~vi~i~SfSK~~~lpG-lRiG~ii~~~~l~~~~~~~-------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~  313 (405)
T PRK06207        242 NVITIMGPSKTESLSG-YRLGVAFGSPAIIDRMEKL-------QAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAI  313 (405)
T ss_pred             cEEEEecchhhccCcc-cceEEEEcCHHHHHHHHHH-------HhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence             22   6899887 45 8999999999998888642       111233445566676666664210  01234445555


Q ss_pred             HHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEE
Q 010250          408 APKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMM  478 (514)
Q Consensus       408 ~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi  478 (514)
                      .+.+.+.|+++   +.+..... -|.++++++.....          ....+...|+ ++||.+.++       .+++||
T Consensus       314 r~~l~~~L~~~---~~~~~~~p~gg~fl~~~l~~~~~----------~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ri  380 (405)
T PRK06207        314 RDDLLRVLRGV---EGVFVRAPQAGSYLFPRLPRLAV----------SLHDFVKILRLQAGVIVTPGTEFSPHTADSIRL  380 (405)
T ss_pred             HHHHHHHHhcC---CCceecCCCeeEEEEEeCcccCC----------CHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEE
Confidence            66666666544   22222223 36788888753210          1345777886 689999874       246999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      +  +..+++++++++++|.+++++.
T Consensus       381 s--~~~~~~~l~~al~rl~~~l~~~  403 (405)
T PRK06207        381 N--FSQDHAAAVAAAERIAQLIERY  403 (405)
T ss_pred             E--ecCCHHHHHHHHHHHHHHHHHh
Confidence            9  5668999999999999988654

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=99.86  E-value=1e-19  Score=188.74  Aligned_cols=341  Identities=14%  Similarity=0.125  Sum_probs=209.9

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-c--cccc--cCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-H--SFWN--RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE  173 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~--~~~~--~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse  173 (514)
                      +..|||..+.      |.-++.+++++.+.+...... +  ....  ...+...++.+.++++++....++|+|++|+++
T Consensus        16 ~~iyld~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~t~g~t~   89 (398)
T TIGR03392        16 GTVYLDSAAT------ALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAENIVWTRGTTE   89 (398)
T ss_pred             CeEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChHH
Confidence            5689996543      446789999998887532111 0  0000  012334567788888885434578999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE  250 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (514)
                      ++..++......    .-.++++||+.++.|++.....   ....|...            ..++.+..+          
T Consensus        90 ~l~~~~~~~~~~----~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v------------~~v~~~~~~----------  143 (398)
T TIGR03392        90 SINLVAQSYARP----RLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKV------------VKLPIGADL----------  143 (398)
T ss_pred             HHHHHHHHhhhc----cCCCCCEEEECCcchhHHHHHHHHHHHHcCcEE------------EEEecCCCC----------
Confidence            999998765210    0023468899888887632111   11111111            111111100          


Q ss_pred             HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250          251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS  330 (514)
Q Consensus       251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g  330 (514)
                         ..+.+++++++.    +++.+|++..+++.+|.+.|    +++|.++|++||+++|+|++|+ +|..    ..+...
T Consensus       144 ---~~~~~~l~~~i~----~~t~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~~----~~~~~~  207 (398)
T TIGR03392       144 ---LPDIRQLPELLT----PRTRILALGQMSNVTGGCPD----LARAITLAHQYGAVVVVDGAQG-VVHG----PPDVQA  207 (398)
T ss_pred             ---CcCHHHHHHHhc----cCceEEEEECccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCC----CCChhh
Confidence               011467777664    34667777778888898887    8999999999999999999996 4332    122223


Q ss_pred             CCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCc--------c-----cccC-CCCCcHHHHHHHHHHHHH
Q 010250          331 IKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGS--------F-----SHGF-TYSGHPVSCAVAIEALKI  394 (514)
Q Consensus       331 v~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~--------~-----~~~~-t~~~~pl~~aaa~aal~~  394 (514)
                      ..+|+.++|  |.++ . ..+|++++++++++.+.+.......        +     .... .-..+..+.++..++++.
T Consensus       208 ~~~d~~~~s~~K~~g-p-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~  285 (398)
T TIGR03392       208 LDIDFYAFSGHKLYG-P-TGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEW  285 (398)
T ss_pred             cCCCEEEEecccccC-C-CceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHH
Confidence            457888888  9554 2 3589999999988776431100000        0     0000 012334466666677777


Q ss_pred             Hhhc---cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe
Q 010250          395 YKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV  471 (514)
Q Consensus       395 ~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~  471 (514)
                      +.+.   ++.++..++.+++++.|+++....+..  ...+.++.+.+....            ...+...|.++||.++.
T Consensus       286 l~~~g~~~i~~~~~~l~~~l~~~l~~l~g~~~~~--~~~~~i~~~~~~~~~------------~~~l~~~L~~~gI~v~~  351 (398)
T TIGR03392       286 LTDIDIAAAEAWSVSLADLAEERLAQLPGFRSFR--CPGSSLLAFDFAGVH------------HSDLAALLAESGIALRA  351 (398)
T ss_pred             HHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC--CCCCcEEEEEeCCcC------------HHHHHHHHHhCCEEEec
Confidence            6543   355677777788888777652211111  112345555553211            34577888999999975


Q ss_pred             e-------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          472 S-------------GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       472 ~-------------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      +             ++.||+++...+|++||+++++.|+++++++
T Consensus       352 g~~~~~~~~~~~g~~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~~  396 (398)
T TIGR03392       352 GQHCAQPLMAALGVSGTLRASFAPYNTQQDVDALVDAVGAALELL  396 (398)
T ss_pred             CccchHHHHHHhCCCCEEEEEeeccCCHHHHHHHHHHHHHHHHHh
Confidence            3             2479999999999999999999999987653

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=99.86  E-value=8.1e-20  Score=186.95  Aligned_cols=320  Identities=16%  Similarity=0.142  Sum_probs=196.3

Q ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEE-eCChhHHH
Q 010250           97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFF-TNSGSEAN  175 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~-~~sGseA~  175 (514)
                      .+++.++||.+|.  +++| .+|.+++++.+.+.....|      +.....++.+.++++++ ...+++++ +++.++++
T Consensus        31 ~~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~y------~~~~~~~lr~~ia~~~~-~~~~~i~~~~~Ga~~~i  100 (361)
T PRK00950         31 IDPESIIKLGSNE--NPLG-PSPKAVEAIEKELSKIHRY------PEPDAPELREALSKYTG-VPVENIIVGGDGMDEVI  100 (361)
T ss_pred             CCccceEEccCCC--CCCC-CCHHHHHHHHHHHHhhcCC------CCCCHHHHHHHHHHHhC-CCHHHEEEeCCCHHHHH
Confidence            4677899998774  4577 5789999998877653222      22234778888988873 34578888 56667788


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      ..+++...        .+++.|++.+++|......... .|....            .++.++.|.             .
T Consensus       101 ~~~~~~~~--------~~gd~vlv~~p~y~~~~~~~~~-~g~~~~------------~~~~~~~~~-------------~  146 (361)
T PRK00950        101 DTLMRTFI--------DPGDEVIIPTPTFSYYEISAKA-HGAKPV------------YAKREEDFS-------------L  146 (361)
T ss_pred             HHHHHHhc--------CCCCEEEEcCCChHHHHHHHHH-cCCEEE------------EeecCCCCC-------------c
Confidence            88777652        2346788888888665322211 121110            011111111             1


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecccCCCCc
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPD  334 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~~gv~pD  334 (514)
                      +++++++.+.    .++.++++...++++|.+.+    .+++.++|+++|+++|+||+|.+|. .+.... ...++-.--
T Consensus       147 ~~~~l~~~~~----~~~~~v~~~~p~nptG~~~~----~~~l~~l~~~~~~~li~De~y~~~~-~~~~~~~~~~~~~vi~  217 (361)
T PRK00950        147 DVDSVLNAIT----EKTKVIFLCTPNNPTGNLIP----EEDIRKILESTDALVFVDEAYVEFA-EYDYTPLALEYDNLII  217 (361)
T ss_pred             CHHHHHHHhc----cCCCEEEEeCCCCCCCCCcC----HHHHHHHHHHCCcEEEEECchhhhC-ccchHHHHHhcCCEEE
Confidence            1456666553    23444444444677788877    7889999999999999999998773 111111 111110011


Q ss_pred             hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHh
Q 010250          335 LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQD  413 (514)
Q Consensus       335 iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~  413 (514)
                      +-+|||.++..++++|++++++++++.+...         ..+++.++++++++.++++..+. ++..++++++.+++.+
T Consensus       218 ~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~  288 (361)
T PRK00950        218 GRTFSKVFGLAGLRIGYGFVPEWLIDYYMRA---------KTPFSLTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYN  288 (361)
T ss_pred             EEeehHhhcCchhhcchhcCCHHHHHHHHHh---------cCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh
Confidence            2278999984338999999999998888632         12345667777777777652110 1223344444444444


Q ss_pred             hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------CCEEEEeCCCCCCH
Q 010250          414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMSPPFIMSP  486 (514)
Q Consensus       414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g~~iRi~p~~~~t~  486 (514)
                      .|. +   .   .....|.++++.+.. .           ....+++.|.++||.+.++       .+.||++.   .++
T Consensus       289 ~l~-~---~---~~~~~~~~i~~~~~~-~-----------~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~---~~~  346 (361)
T PRK00950        289 ELP-F---K---VYPSEANFVLVDVTP-M-----------TAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSI---GTF  346 (361)
T ss_pred             hcC-e---e---ECCCcceEEEEECCC-C-----------CHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEEC---CCH
Confidence            443 1   1   112345666776621 1           1456888999999999863       24699993   388


Q ss_pred             HHHHHHHHHHHHHH
Q 010250          487 EEVDELISKYGKAL  500 (514)
Q Consensus       487 e~id~~~~~l~~~l  500 (514)
                      +++++++++|++++
T Consensus       347 ~~~~~l~~~L~~il  360 (361)
T PRK00950        347 EENERFLEILKEIV  360 (361)
T ss_pred             HHHHHHHHHHHHHh
Confidence            89999999998875

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.86  E-value=7.2e-20  Score=185.52  Aligned_cols=322  Identities=18%  Similarity=0.167  Sum_probs=198.7

Q ss_pred             EccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHH
Q 010250          104 DSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVW  183 (514)
Q Consensus       104 D~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~  183 (514)
                      ||.|.   +++| .+|++++++.+.+....    . .++.+...++++.++++++   .+.++++++|++|+..+++..+
T Consensus         1 ~~~~~---~~~~-~~~~v~~a~~~~~~~~~----~-~~~~~~~~~l~~~~a~~~g---~~~~~~~~~gt~a~~~~~~~l~   68 (338)
T cd06502           1 DFRSD---TVTG-PTPEMLEAMAAANVGDD----V-YGEDPTTAKLEARAAELFG---KEAALFVPSGTAANQLALAAHT   68 (338)
T ss_pred             Ccccc---cCCC-CCHHHHHHHHhcccCCc----c-cCCCHHHHHHHHHHHHHhC---CCeEEEecCchHHHHHHHHHhc
Confidence            67777   7788 78999999988653221    1 1244567899999999884   4678999999999999988764


Q ss_pred             HHHhhcCCCCccEEEEEecCCcccceee---eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHH
Q 010250          184 YYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL  260 (514)
Q Consensus       184 ~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  260 (514)
                              .+++.|++.++ +|.+....   ....|....            .++... +             ..+.+++
T Consensus        69 --------~~gd~v~~~~~-~~~~~~~~~~~~~~~g~~~~------------~v~~~~-~-------------~~d~~~l  113 (338)
T cd06502          69 --------QPGGSVICHET-AHIYTDEAGAPEFLSGVKLL------------PVPGEN-G-------------KLTPEDL  113 (338)
T ss_pred             --------CCCCeEEEecC-cceeeecCCcHHHHcCceEE------------eecCCC-C-------------cCCHHHH
Confidence                    33456665554 44432211   111121110            111100 0             1125777


Q ss_pred             HHHHHHhC---CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc--ccccccceecccCCCCch
Q 010250          261 EDLILKEG---PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF--GRLGTMFGCDKYSIKPDL  335 (514)
Q Consensus       261 e~li~~~~---~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~--gr~G~~~~~~~~gv~pDi  335 (514)
                      ++++.+..   ..++++|+++..++.||.+  +.+.+++|.++|++||+++|+||+|..+  +..|.  ....+...+|+
T Consensus       114 ~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~--~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~--~~~~~~~~~d~  189 (338)
T cd06502         114 EAAIRPRDDIHFPPPSLVSLENTTEGGTVY--PLDELKAISALAKENGLPLHLDGARLANAAAALGV--ALKTYKSGVDS  189 (338)
T ss_pred             HHHhhccCCCcCCcceEEEEEeecCCcccc--CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC--CHHHHHhcCCE
Confidence            77775311   1245677777666666544  6678999999999999999999987411  11121  11222234566


Q ss_pred             h--chhhhhcCCccccee-EEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 010250          336 V--SFAKALSSAYMPIGA-ILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQ  412 (514)
Q Consensus       336 v--~~sK~l~gG~~pig~-v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~  412 (514)
                      +  +++|.++.   |.|+ +++++++++.+....     ..+++++..+++.++++.++|+.-...+..+++.++.+++.
T Consensus       190 ~~~s~sK~~~~---~~g~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~  261 (338)
T cd06502         190 VSFCLSKGGGA---PVGAVVVGNRDFIARARRRR-----KQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLA  261 (338)
T ss_pred             EEEeccccCCC---ccceEEECCHHHHHHHHHHH-----HHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Confidence            5  57798864   3354 457888888876421     12335566677777888877763222345677888888999


Q ss_pred             hhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH---HCCcEEEeeC-CEEEEeCCCCCCHHH
Q 010250          413 DGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE---KHGMLVRVSG-DNIMMSPPFIMSPEE  488 (514)
Q Consensus       413 ~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~Gv~~~~~g-~~iRi~p~~~~t~e~  488 (514)
                      +.|+++. ..   .....+.+..+.+....          .....+.+.+.   ++|+++.+.+ +.|||+|++.+|++|
T Consensus       262 ~~L~~~~-~~---~~~~~~~~~~v~~~~~~----------~~~~~l~~~l~~~~~~gi~~~~~~~~~lRi~~~~~~~~~~  327 (338)
T cd06502         262 EALEELG-GL---ESEVQTNIVLLDPVEAN----------AVFVELSKEAIERRGEGVLFYAWGEGGVRFVTHWDTTEED  327 (338)
T ss_pred             HHHHhcC-CC---cccccCCeEEEecCCcc----------HHHHHHHHHHHHhhhCCEEEEecCCCeEEEEeecCCCHHH
Confidence            9998762 11   11123334444432111          12233444443   6899998764 679999999999999


Q ss_pred             HHHHHHHHHH
Q 010250          489 VDELISKYGK  498 (514)
Q Consensus       489 id~~~~~l~~  498 (514)
                      ++++++++++
T Consensus       328 i~~~~~~l~~  337 (338)
T cd06502         328 VDELLSALKA  337 (338)
T ss_pred             HHHHHHHHhc
Confidence            9999998865

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=99.86  E-value=9.4e-20  Score=186.88  Aligned_cols=325  Identities=16%  Similarity=0.161  Sum_probs=202.4

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV  179 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al  179 (514)
                      +.++++..|.  +.+| .+|++++++.+.+.....|    .  .....+|.+.|++++. .+.++|++++|+++++..++
T Consensus        32 ~~~~~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~Y----~--~~~~~~Lr~~ia~~~~-~~~~~I~it~G~~~~l~~~~  101 (369)
T PRK08153         32 PFRARIGANE--SGFG-PSPSVIAAMREAAAEIWKY----G--DPENHDLRHALAAHHG-VAPENIMVGEGIDGLLGLIV  101 (369)
T ss_pred             cceeEecCCC--CCCC-CCHHHHHHHHHHHHHhhcC----C--CCccHHHHHHHHHHhC-CCHHHEEEcCCHHHHHHHHH
Confidence            3567887663  3455 6889999998876542222    1  1125678888988873 45578999999999999988


Q ss_pred             HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250          180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN  259 (514)
Q Consensus       180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (514)
                      .+..        ..++.|++.+++|.+........+.. .            ..+++..      ..        .++++
T Consensus       102 ~~~~--------~~gd~vlv~~p~y~~~~~~~~~~g~~-~------------~~vp~~~------~~--------~~~~~  146 (369)
T PRK08153        102 RLYV--------EPGDPVVTSLGAYPTFNYHVAGFGGR-L------------VTVPYRD------DR--------EDLDA  146 (369)
T ss_pred             HHhc--------CCCCEEEECCCcchHHHHHHHHcCCe-E------------EEeeCCC------CC--------CCHHH
Confidence            8653        33568888899987754222211111 0            0111100      00        01233


Q ss_pred             HHHHHHHhCCCcEE-EEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh--
Q 010250          260 LEDLILKEGPETIA-AFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--  336 (514)
Q Consensus       260 le~li~~~~~~~~a-avivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--  336 (514)
                      +++...   ..++. .++++|.+++ |.+. +.+.+++|.++|++ |++||+||++..|+..|......  ...|+++  
T Consensus       147 l~~~~~---~~~~~~i~l~~P~NPt-G~~~-~~~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~~~~~~~--~~~~~~i~~  218 (369)
T PRK08153        147 LLDAAR---RENAPLVYLANPDNPM-GSWH-PAADIVAFIEALPE-TTLLVLDEAYCETAPAGAAPPID--TDDPNVIRM  218 (369)
T ss_pred             HHHHhc---ccCCcEEEEeCCCCCC-CCCC-CHHHHHHHHHhCCC-CcEEEEeCchhhhcCcccchhhh--hcCCCEEEE
Confidence            333222   12333 4455775555 6655 45667777777764 99999999999886544321111  1234433  


Q ss_pred             -chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhh
Q 010250          337 -SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDG  414 (514)
Q Consensus       337 -~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~  414 (514)
                       +|||.++.+++++|++++++++++.+...         ..+++.+++++.++.++|+.-+ -+.+.+.++++.+++.+.
T Consensus       219 ~SfSK~~g~~GlRiG~~v~~~~~~~~l~~~---------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~  289 (369)
T PRK08153        219 RTFSKAYGLAGARVGYAIGAPGTIKAFDKV---------RNHFGMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAI  289 (369)
T ss_pred             ecchHhccCcchheeeeecCHHHHHHHHHh---------hcCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence             79999873339999999999999888642         1246778999999988885211 122344555566666666


Q ss_pred             hhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE-ee----CCEEEEeCCCCCCHHHH
Q 010250          415 VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VS----GDNIMMSPPFIMSPEEV  489 (514)
Q Consensus       415 L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~-~~----g~~iRi~p~~~~t~e~i  489 (514)
                      |++.   ++ ......|.++.+++....          ..+..+.++|.++||.++ +.    .+.+|++   ..+++++
T Consensus       290 L~~~---g~-~~~p~~~~f~~~~~~~~~----------~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis---~~~~~~~  352 (369)
T PRK08153        290 ARAN---GL-TPLPSATNFVAIDCGRDG----------AFARAVLDGLIARDIFVRMPGVAPLDRCIRVS---CGPDEEL  352 (369)
T ss_pred             HHHC---CC-ccCCCcCcEEEEECCCCc----------ccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEe---cCCHHHH
Confidence            6543   22 122344666666653211          125668889999999996 32    2469999   3489999


Q ss_pred             HHHHHHHHHHHHHH
Q 010250          490 DELISKYGKALKAT  503 (514)
Q Consensus       490 d~~~~~l~~~l~~~  503 (514)
                      +.++++|++++...
T Consensus       353 ~~~~~al~~~~~~~  366 (369)
T PRK08153        353 DLFAEALPEALEAA  366 (369)
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999888644

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=99.86  E-value=4.8e-20  Score=188.54  Aligned_cols=326  Identities=12%  Similarity=0.151  Sum_probs=212.0

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT  177 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~  177 (514)
                      +++..+|+..|-  +++| .+|++++++.+.+.....|      +.....+|.+.|+++++ .+.++|++++|++|++..
T Consensus        27 ~~~~~i~l~~ne--n~~~-~~~~v~~a~~~~~~~~~~Y------p~~g~~~Lr~aia~~~~-~~~~~I~vt~Gs~e~i~~   96 (366)
T PRK01533         27 GDHSFVKLASNE--NPFG-CSPRVLDELQKSWLDHALY------PDGGATTLRQTIANKLH-VKMEQVLCGSGLDEVIQI   96 (366)
T ss_pred             CCCceEEeCCCC--CCCC-CCHHHHHHHHHHHHhcCcC------CCCCHHHHHHHHHHHhC-CCcceEEECCCHHHHHHH
Confidence            356789987764  5677 6788999998876553322      22334678888888874 456899999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      +++...        ..++.|++.+++|.+....+... |...            ..++.. .+.             .++
T Consensus        97 ~~~~l~--------~~gd~vlv~~P~y~~~~~~~~~~-g~~v------------~~v~~~-~~~-------------~d~  141 (366)
T PRK01533         97 ISRAVL--------KAGDNIVTAGATFPQYRHHAIIE-GCEV------------KEVALN-NGV-------------YDL  141 (366)
T ss_pred             HHHHhc--------CCCCEEEEcCCcHHHHHHHHHHc-CCEE------------EEeecC-CCC-------------cCH
Confidence            988763        23468999999998765433221 1111            011110 000             124


Q ss_pred             HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceecccCCCCchh
Q 010250          258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDKYSIKPDLV  336 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~~gv~pDiv  336 (514)
                      +++++.+.   ++....+++.| ++++|.+. +.+.+++|.++|++++ ++|+||+|..|-..+.. -......-.+.++
T Consensus       142 ~~l~~~~~---~~~~~v~i~~P-~NPTG~~~-~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi  215 (366)
T PRK01533        142 DEISSVVD---NDTKIVWICNP-NNPTGTYV-NDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNIL  215 (366)
T ss_pred             HHHHHHhC---cCCcEEEEeCC-CCCCCCCc-CHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEE
Confidence            66666553   22334455555 66667665 5577888888898876 57779999876332211 0111111123333


Q ss_pred             ---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHH
Q 010250          337 ---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQ  412 (514)
Q Consensus       337 ---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~  412 (514)
                         +|||.++..++++|++++++++++.+...       .  .+++.+.+++.++.++|+.-+ .+.+.+..++..+++.
T Consensus       216 ~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~~-------~--~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~  286 (366)
T PRK01533        216 VLRTFSKAYGLASFRVGYAVGHEELIEKLNVV-------R--LPFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYE  286 (366)
T ss_pred             EEeCchHHhcChHHHHhHHhCCHHHHHHHHHh-------c--CCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence               68998874339999999999999988641       1  357788899999888885211 1223444555555666


Q ss_pred             hhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHH
Q 010250          413 DGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDEL  492 (514)
Q Consensus       413 ~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~  492 (514)
                      +.++.+ ..+   .....|.++.+.+.+              ...+...|+++||.+++..++||++   ..+.++.+++
T Consensus       287 ~~l~~~-g~~---~~~~~~nf~~~~~~~--------------~~~~~~~l~~~GI~Vr~~~~~iRis---~~~~~~~~~l  345 (366)
T PRK01533        287 SFCKEN-EIP---FYQSQTNFIFLPVEN--------------GGEIYEACAHAGFIIRPFPNGVRIT---VGTREQNEGV  345 (366)
T ss_pred             HHHHhC-CCc---cCCCcCcEEEEeCCC--------------HHHHHHHHHHCCcEEccCCCceEEe---CCCHHHHHHH
Confidence            666554 211   223467777777631              2357789999999999887889999   7899999999


Q ss_pred             HHHHHHHHHHHH
Q 010250          493 ISKYGKALKATE  504 (514)
Q Consensus       493 ~~~l~~~l~~~~  504 (514)
                      +++|+++++..+
T Consensus       346 ~~al~~~~~~~~  357 (366)
T PRK01533        346 ISVLQQHFENKK  357 (366)
T ss_pred             HHHHHHHHHhcc
Confidence            999998876544

>cd00609 AAT_like Aspartate aminotransferase family

Probab=99.86  E-value=1.2e-19  Score=184.31  Aligned_cols=293  Identities=16%  Similarity=0.145  Sum_probs=190.1

Q ss_pred             hHHHHHHHHHHhcCc-----CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcc
Q 010250          145 PSLDLAKELLEMFTA-----SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPA  219 (514)
Q Consensus       145 ~~~ela~~L~~~~~~-----~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~  219 (514)
                      ...++.+.+++++..     .+.+.++++++|++|+..+++.+.        ..+++|++.+++|++...........  
T Consensus        37 ~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~--------~~g~~vl~~~~~~~~~~~~~~~~~~~--  106 (350)
T cd00609          37 GLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL--------NPGDEVLVPDPTYPGYEAAARLAGAE--  106 (350)
T ss_pred             CcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC--------CCCCEEEEcCCCchhHHHHHHHCCCE--
Confidence            334455555555421     135689999999999999998773        23567888888877654322221111  


Q ss_pred             ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 010250          220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA  299 (514)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~  299 (514)
                                 +..++......     .. . .    .++++.++    .+++++|++++.++++|.+. +.+.+++|.+
T Consensus       107 -----------~~~i~~~~~~~-----~~-~-~----~~~~~~~~----~~~~~~v~i~~~~~~tG~~~-~~~~l~~l~~  159 (350)
T cd00609         107 -----------VVPVPLDEEGG-----FL-L-D----LELLEAAK----TPKTKLLYLNNPNNPTGAVL-SEEELEELAE  159 (350)
T ss_pred             -----------EEEEecccccC-----Cc-c-C----HHHHHhhc----CccceEEEEECCCCCCCccc-CHHHHHHHHH
Confidence                       01111110000     00 0 0    12222222    35788999999888889765 5678899999


Q ss_pred             HHHhcCCEEEEechhcCcccccccce--ecccCCCCchh--chhhhhc-CCcccceeEEeCH-HHHHHhhhccCCCCccc
Q 010250          300 VVKKYDILFIADEVICAFGRLGTMFG--CDKYSIKPDLV--SFAKALS-SAYMPIGAILVSP-EVSEVIHSQSNTLGSFS  373 (514)
Q Consensus       300 l~~~~gillI~DEv~tG~gr~G~~~~--~~~~gv~pDiv--~~sK~l~-gG~~pig~v~~~~-~i~~~l~~~~~~~~~~~  373 (514)
                      +|+++|+++|+||++++++..+....  ........|++  +++|.++ +| .++|++++++ ++++.+...       .
T Consensus       160 ~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g-~~~G~i~~~~~~~~~~~~~~-------~  231 (350)
T cd00609         160 LAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPG-LRIGYLIAPPEELLERLKKL-------L  231 (350)
T ss_pred             HHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcc-cceEEEecCHHHHHHHHHHH-------H
Confidence            99999999999999998766554321  11111122443  6889998 55 7999999999 788888642       2


Q ss_pred             ccCCCCCcHHHHHHHHHHHHHH--hhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCc
Q 010250          374 HGFTYSGHPVSCAVAIEALKIY--KERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPE  451 (514)
Q Consensus       374 ~~~t~~~~pl~~aaa~aal~~~--~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~  451 (514)
                      ...++..++.++.++.++++..  ..+...+++.++.+++++.|++......  .....|.+..+.+....         
T Consensus       232 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~~~g~~~~~~~~~~~---------  300 (350)
T cd00609         232 PYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVV--VKPSGGFFLWLDLPEGD---------  300 (350)
T ss_pred             HhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccc--cCCCccEEEEEecCCCC---------
Confidence            2335667788888888888765  2245677888889999999987621111  23345667777665321         


Q ss_pred             cchHHHHHHHHHHCCcEEEee-------CCEEEEeCCCCCCHHHHHHHHHHHH
Q 010250          452 WGIGAYFGAQCEKHGMLVRVS-------GDNIMMSPPFIMSPEEVDELISKYG  497 (514)
Q Consensus       452 ~~~~~~~~~~l~~~Gv~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~  497 (514)
                        ....+.+.|.+.|+.+.+.       +..||++++..  ++||++++++|+
T Consensus       301 --~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~  349 (350)
T cd00609         301 --DEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA  349 (350)
T ss_pred             --hHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence              1344667777889998864       35799998766  999999999886

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=99.85  E-value=2.8e-19  Score=185.67  Aligned_cols=340  Identities=14%  Similarity=0.107  Sum_probs=210.1

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-ccc----cccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSF----WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE  173 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~~----~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse  173 (514)
                      +..|||..+.      |.-++.+.+++.+.++..... ++.    .....+...++.+.++++++..+.+.|+|++|+++
T Consensus        19 ~~~yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~~i~~~~~~t~   92 (401)
T PRK10874         19 AGVYLDSAAT------ALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAKNIVWTRGTTE   92 (401)
T ss_pred             ceEEEeCCcc------cCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCHHH
Confidence            5679996543      446788999998887642111 110    01123445677888998885435678999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE  250 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (514)
                      ++..+++.....    .-+++++||+.++.|++.....   ....|...            ..++.+..+          
T Consensus        93 ~i~~~~~~~~~~----~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v------------~~v~~~~~~----------  146 (401)
T PRK10874         93 SINLVAQSYARP----RLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKV------------VKLPLGADR----------  146 (401)
T ss_pred             HHHHHHHHhhhc----cCCCcCEEEECCcchHHHHHHHHHHHHHhCCEE------------EEEecCCCC----------
Confidence            999998765210    0023468999888887631111   11111111            111111100          


Q ss_pred             HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250          251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS  330 (514)
Q Consensus       251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g  330 (514)
                         ..+++++++.+.    +++.+|++..+++.+|.+.|    +++|.++|+++|+++|+|++|+ +|..    ..+...
T Consensus       147 ---~~d~~~l~~~i~----~~t~lv~i~~~~n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~-~g~~----~~~~~~  210 (401)
T PRK10874        147 ---LPDVDLLPELIT----PRTRILALGQMSNVTGGCPD----LARAITLAHQAGMVVMVDGAQG-AVHF----PADVQA  210 (401)
T ss_pred             ---cCCHHHHHHhcC----cCcEEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEECCcc-cccc----cCCchh
Confidence               011466776663    35667777778888898887    8999999999999999999996 4433    122223


Q ss_pred             CCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCc-------------ccccCC-CCCcHHHHHHHHHHHHH
Q 010250          331 IKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGS-------------FSHGFT-YSGHPVSCAVAIEALKI  394 (514)
Q Consensus       331 v~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~-------------~~~~~t-~~~~pl~~aaa~aal~~  394 (514)
                      +.+|++++|  |.++ . ..+|++++++++++.+.+.......             ...... -+.|..+.++..++++.
T Consensus       211 ~~~d~~~~s~~K~~g-p-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~  288 (401)
T PRK10874        211 LDIDFYAFSGHKLYG-P-TGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEW  288 (401)
T ss_pred             cCCCEEEEecccccC-C-CccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHH
Confidence            347877665  9553 2 3479999999988876431100000             000000 12344566666667776


Q ss_pred             Hhhc---cHHHHHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250          395 YKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR  470 (514)
Q Consensus       395 ~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~  470 (514)
                      +.+.   +..++.+++.+++++.|+++.   .+... ...+.++.+.+....            ...+.+.|.++||.++
T Consensus       289 l~~~g~~~~~~~~~~l~~~l~~~l~~~~---g~~~~~~~~~~i~~~~~~~~~------------~~~~~~~L~~~gI~v~  353 (401)
T PRK10874        289 LADIDINQAESWSRSLATLAEDALAKLP---GFRSFRCQDSSLLAFDFAGVH------------HSDLVTLLAEYGIALR  353 (401)
T ss_pred             HHHhCHHHHHHHHHHHHHHHHHHHhcCC---CEEEeCCCCCcEEEEEECCcC------------HHHHHHHHHHCCcEEe
Confidence            6543   356777777888888887652   22111 122345555553211            3457788889999987


Q ss_pred             ee-------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          471 VS-------------GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       471 ~~-------------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ++             .+.||+++...+|++||+++++.|+++++.+
T Consensus       354 ~g~~~~~~~~~~~g~~~~iRiS~~~~nt~edid~ll~al~~~~~~~  399 (401)
T PRK10874        354 AGQHCAQPLLAALGVTGTLRASFAPYNTQSDVDALVNAVDRALELL  399 (401)
T ss_pred             ccccchHHHHHHhCCCCEEEEEecccCCHHHHHHHHHHHHHHHHHh
Confidence            52             2469999999999999999999999988754

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=99.85  E-value=2.3e-19  Score=186.47  Aligned_cols=340  Identities=14%  Similarity=0.092  Sum_probs=211.0

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc-ccc-c---cccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHS-F---WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE  173 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~-~---~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse  173 (514)
                      +..|||..+.      |..++.+++++.+.+..... .++ .   .....+...++.+.|+++++..+.++|+|++|+++
T Consensus        23 ~~iYld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~   96 (406)
T PRK09295         23 PLAYLDSAAS------AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAEELVFVRGTTE   96 (406)
T ss_pred             ceEEEeCccc------ccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHH
Confidence            4589997654      34678899999888864221 100 0   01123445677788888885434578999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee---cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS---LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE  250 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~---~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (514)
                      ++..+++.....   .. .++++||+.+..||+.......   ..|..            +..++.+..++         
T Consensus        97 ~l~~~~~~~~~~---~~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~------------v~~v~~~~~~~---------  151 (406)
T PRK09295         97 GINLVANSWGNS---NV-RAGDNIIISEMEHHANIVPWQMLCARVGAE------------LRVIPLNPDGT---------  151 (406)
T ss_pred             HHHHHHHHhhhh---cC-CCcCEEEECcchhhHHHHHHHHHHHHcCcE------------EEEEecCCCCC---------
Confidence            999888754110   01 2346788888777664211110   11111            11111111100         


Q ss_pred             HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250          251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS  330 (514)
Q Consensus       251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g  330 (514)
                          .+.++|++++.    +++.+|++..+++.+|.+.|    +++|.++|+++|+++|+|++|+ +|..  .....  .
T Consensus       152 ----~d~~~l~~~i~----~~t~lv~l~~~~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~--~~~~~--~  214 (406)
T PRK09295        152 ----LQLETLPALFD----ERTRLLAITHVSNVLGTENP----LAEMIALAHQHGAKVLVDGAQA-VMHH--PVDVQ--A  214 (406)
T ss_pred             ----CCHHHHHHhcC----CCcEEEEEecchhcccccCC----HHHHHHHHHHcCCEEEEEcccc-cCcc--ccCch--h
Confidence                11466776664    35677888888888999987    9999999999999999999996 5433  12222  3


Q ss_pred             CCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCc-----cccc----------CCCCCcHHHHHHHHHHHH
Q 010250          331 IKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGS-----FSHG----------FTYSGHPVSCAVAIEALK  393 (514)
Q Consensus       331 v~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~-----~~~~----------~t~~~~pl~~aaa~aal~  393 (514)
                      ..+|++++|  |.+ |+ ..+|++++++++++.+.+.....+.     ....          .+-+.|..+..+..++++
T Consensus       215 ~~~D~~~~s~~K~~-gp-~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~  292 (406)
T PRK09295        215 LDCDFYVFSGHKLY-GP-TGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALD  292 (406)
T ss_pred             cCCCEEEeehhhcc-CC-CCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHH
Confidence            346887665  944 43 3589999999987766421000000     0000          011345667777788888


Q ss_pred             HHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250          394 IYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR  470 (514)
Q Consensus       394 ~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~  470 (514)
                      .+.+   +.+.++.+++.++++++|+++....+.... ..+.++.+.+....            ...+...|.++||.++
T Consensus       293 ~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~-~~~~iv~~~~~~~~------------~~~~~~~L~~~gI~v~  359 (406)
T PRK09295        293 YVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQ-NRLGVIAFNLGKHH------------AYDVGSFLDNYGIAVR  359 (406)
T ss_pred             HHHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC-CCceEEEEEECCcC------------HHHHHHHHHhCCeEEe
Confidence            8765   345677888888888888765322222211 12345566554211            3346678889999987


Q ss_pred             eeC-------------CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          471 VSG-------------DNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       471 ~~g-------------~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      .+.             ..||++|....|++|||.+++.|++...
T Consensus       360 ~g~~c~~~~~~~~~~~~~iRiS~~~ynt~~did~l~~~l~~i~~  403 (406)
T PRK09295        360 TGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVAGLQRIHR  403 (406)
T ss_pred             ccccchHHHHHHHCCCCEEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence            431             3699999999999999999999987643

>PRK05764 aspartate aminotransferase; Provisional

Probab=99.85  E-value=9.5e-19  Score=181.16  Aligned_cols=340  Identities=14%  Similarity=0.135  Sum_probs=204.5

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----C-cCCCCeEEEeCChhH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----T-ASKMAKVFFTNSGSE  173 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~-~~~~~~v~~~~sGse  173 (514)
                      +..++||..|...  ++ .+|.+.+++.+.+......+.    +.....+|.+.|++++    + ....+++++++|+++
T Consensus        30 ~~~~~~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~Y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~  102 (393)
T PRK05764         30 GRDVISLGAGEPD--FD-TPEHIKEAAIEALDDGKTKYT----PAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQ  102 (393)
T ss_pred             cCCEEEeCCCCCC--CC-CCHHHHHHHHHHHhcCCCCcC----CCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHH
Confidence            4568898887532  33 578999999888764321111    1122344445554443    2 224478999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhH
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEE  251 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  251 (514)
                      |+..++..+.        ..++.|++.+++|.+....... .|....            .++..  ..|.          
T Consensus       103 a~~~~~~~~~--------~~gd~vl~~~p~y~~~~~~~~~-~g~~~~------------~~~~~~~~~~~----------  151 (393)
T PRK05764        103 ALYNAFMALL--------DPGDEVIIPAPYWVSYPEMVKL-AGGVPV------------FVPTGEENGFK----------  151 (393)
T ss_pred             HHHHHHHHhc--------CCCCEEEecCCCCcchHHHHHH-cCCEEE------------EEecCcccCCc----------
Confidence            9999887653        3346799999988775332222 121110            01110  0000          


Q ss_pred             HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-ee-cc-
Q 010250          252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC-DK-  328 (514)
Q Consensus       252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~-~~-  328 (514)
                         .+.+++++.+.   ++....+++.| ++.+|.+. +.+.+++|.++|++||+++|+||+|..+...|..+ .. .. 
T Consensus       152 ---~d~~~l~~~l~---~~~~~v~~~~p-~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~  223 (393)
T PRK05764        152 ---LTVEQLEAAIT---PKTKALILNSP-SNPTGAVY-SPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLS  223 (393)
T ss_pred             ---CCHHHHHHhhC---ccceEEEEECC-CCCCCccc-CHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcC
Confidence               11356666653   23334455555 55566654 45789999999999999999999998764333221 11 11 


Q ss_pred             cCCCC-ch--hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHH
Q 010250          329 YSIKP-DL--VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQ  403 (514)
Q Consensus       329 ~gv~p-Di--v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~  403 (514)
                      .+..+ ++  .+|||.++..++++|++++++++++.+...       ....+.+.+++++.++.+.|+...+  +++.+.
T Consensus       224 ~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~  296 (393)
T PRK05764        224 PELRDRTITVNGFSKAYAMTGWRLGYAAGPKELIKAMSKL-------QSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQA  296 (393)
T ss_pred             CCCcCCEEEEecCcccccCccceeEEEecCHHHHHHHHHH-------HhhcccCCChHHHHHHHHHHcCChHHHHHHHHH
Confidence            12211 22  258998873338999999999999888642       1123456678888877777752111  234556


Q ss_pred             HHHHHHHHHhhhhhccCCCceeEEEeee-eeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeC-----CEE
Q 010250          404 VNKIAPKFQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-----DNI  476 (514)
Q Consensus       404 ~~~~~~~l~~~L~~l~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g-----~~i  476 (514)
                      ++++.+.+++.|+++....+   ..+.| .++++.+........     . ....+...++ ++||.+.++.     +++
T Consensus       297 ~~~~~~~l~~~L~~~~g~~~---~~~~g~~~~~~~~~~~~~~~~-----~-~~~~~~~~l~~~~gi~v~~g~~f~~~~~v  367 (393)
T PRK05764        297 FEERRDLMVDGLNEIPGLEC---PKPEGAFYVFPNVSKLLGKSI-----T-DSLEFAEALLEEAGVAVVPGIAFGAPGYV  367 (393)
T ss_pred             HHHHHHHHHHHHhhCCCCcc---cCCCcceEEEEeccccccccc-----C-CHHHHHHHHHHhCCEEEccccccCCCCEE
Confidence            66677777777776522222   22344 455666653211000     0 1245666665 5799998642     579


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          477 MMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       477 Ri~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      ||+  +..+++++++++++|.+++++
T Consensus       368 Ris--~~~~~~~~~~~i~~l~~~~~~  391 (393)
T PRK05764        368 RLS--YATSLEDLEEGLERIERFLES  391 (393)
T ss_pred             EEE--ecCCHHHHHHHHHHHHHHHHh
Confidence            999  667999999999999998864

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=99.84  E-value=4.5e-19  Score=181.72  Aligned_cols=344  Identities=17%  Similarity=0.177  Sum_probs=224.8

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccc----cccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYH----SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE  173 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~----~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse  173 (514)
                      +-.|+|..++      +..+..|++++.+...... ..+    ......++...+..+.++++++....+.|+|+.+.|+
T Consensus        22 ~~vylD~aa~------~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~   95 (405)
T COG0520          22 PLVYLDNAAT------SQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTE   95 (405)
T ss_pred             CeEEecCccc------ccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCChhH
Confidence            3468887554      3468899999998875421 111    1111223455666777788775433589999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS  253 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (514)
                      |+..........    - ..++.||+.+--+|....-...+......         .+..++..+.             .
T Consensus        96 aln~va~~l~~~----~-~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga---------~v~~i~~~~~-------------g  148 (405)
T COG0520          96 ALNLVARGLGRS----L-KPGDEIVVSDLEHHSNIVPWQELAKRTGA---------KVRVIPLDDD-------------G  148 (405)
T ss_pred             HHHHHHHHhhhh----h-cCCCEEEEccCcchhhHHHHHHHHHhcCc---------EEEEEecCCC-------------C
Confidence            999888755211    1 23478888888888765433332211000         0111111100             0


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCC
Q 010250          254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP  333 (514)
Q Consensus       254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~p  333 (514)
                      ..+.+++++++.    +++.+|.+..+.+..|.+.|    +++|.++|+++|+++++|-+|+ +|..    .++...+..
T Consensus       149 ~~~~~~~~~~i~----~~Tklvais~vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq~-~~h~----~idv~~l~~  215 (405)
T COG0520         149 LLDLDALEKLIT----PKTKLVALSHVSNVTGTVNP----VKEIAELAHEHGALVLVDAAQA-AGHL----PIDVQELGC  215 (405)
T ss_pred             CcCHHHHHHhcC----CCceEEEEECccccccccch----HHHHHHHHHHcCCEEEEECccc-cCcc----CCCchhcCC
Confidence            111466666553    67889999999999999998    9999999999999999999997 4322    344445567


Q ss_pred             chhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCccc-----ccCCC----------CCcHHHHHHHHHHHHHHh
Q 010250          334 DLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS-----HGFTY----------SGHPVSCAVAIEALKIYK  396 (514)
Q Consensus       334 Div~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~-----~~~t~----------~~~pl~~aaa~aal~~~~  396 (514)
                      |.+.||  |+|.|. ..+|++++++++.+.+.+.....+...     ...++          ..|..+..+..++++.++
T Consensus       216 Df~afsgHKwl~gP-~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~  294 (405)
T COG0520         216 DFLAFSGHKWLLGP-TGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLL  294 (405)
T ss_pred             CEEEEcccccccCC-CceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHH
Confidence            999888  889987 579999999999998854211101000     01111          123334444446666665


Q ss_pred             h---ccHHHHHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee
Q 010250          397 E---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS  472 (514)
Q Consensus       397 ~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~  472 (514)
                      +   +++.++.+++.+++.+.|+++....+.+.. ...+.++.|.+....            ...+...|.++||.++.+
T Consensus       295 ~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~------------~~dv~~~L~~~gI~vr~g  362 (405)
T COG0520         295 EIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIH------------PHDVATLLDEKGIAVRAG  362 (405)
T ss_pred             HHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCC------------HHHHHHHHHhCCeEEEec
Confidence            4   456788888888888888877433332222 135667777766532            456889999999888754


Q ss_pred             C-------------CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          473 G-------------DNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       473 g-------------~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      .             ..+|+++.+..|+||||++++.|++..+
T Consensus       363 ~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~  404 (405)
T COG0520         363 HHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA  404 (405)
T ss_pred             cccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence            2             2399999999999999999999998764

>PRK09148 aminotransferase; Validated

Probab=99.84  E-value=1.8e-18  Score=179.56  Aligned_cols=350  Identities=13%  Similarity=0.076  Sum_probs=210.4

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEA  174 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA  174 (514)
                      .|+.+|||..|.  ..++. ++.+.+++.+.++... ..+....+..+....+++.+.+.++ ....+ +|++++|+++|
T Consensus        28 ~~~~~i~l~~~~--p~~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a  104 (405)
T PRK09148         28 AGADIIDLGMGN--PDLPT-PQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEG  104 (405)
T ss_pred             cCCCeEEcCCCC--CCCCC-CHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence            467889997763  23443 6888888887764311 1111111222333444444443322 12345 79999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      +..++....        ..++.|++.+++|.+........ |...            ..++....      +    .+  
T Consensus       105 l~~~~~~l~--------~~gd~Vl~~~P~y~~~~~~~~~~-g~~v------------~~v~~~~~------~----~~--  151 (405)
T PRK09148        105 FANMAQAIT--------APGDVILCPNPSYPIHAFGFIMA-GGVI------------RSVPAEPD------E----EF--  151 (405)
T ss_pred             HHHHHHHhc--------CCCCEEEEcCCCCcccHHHHHhc-CCEE------------EEEeCCCC------C----CC--
Confidence            999887664        34578999999998864332221 1111            00110000      0    00  


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecccCCCC
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKP  333 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~~gv~p  333 (514)
                        .+++++++....++....+++.| ++.+|.+. +.+.+++|.++|++||+++|+||+|..|...+..+. .....-.+
T Consensus       152 --~~~l~~~~~~~~~~~~~v~l~~P-~NPtG~~~-s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~  227 (405)
T PRK09148        152 --FPALERAVRHSIPKPIALIVNYP-SNPTAYVA-DLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAK  227 (405)
T ss_pred             --ccCHHHHHhhccccceEEEEeCC-CCCCCcCC-CHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCcc
Confidence              24455555443334445555556 45566544 678899999999999999999999987643332211 11111112


Q ss_pred             c----hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHH
Q 010250          334 D----LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKI  407 (514)
Q Consensus       334 D----iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~  407 (514)
                      +    +-+|||.++..++++|++++++++++.+...       ....+++.+.+++.++.+.|+..++  +.+.+.++++
T Consensus       228 ~~~i~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~-------~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~  300 (405)
T PRK09148        228 DVTVEFTSMSKTFSMAGWRMGFAVGNERLIAALTRV-------KSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKR  300 (405)
T ss_pred             CcEEEEeccccccCCcchheeeeeCCHHHHHHHHHH-------HHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence            3    2368998874339999999999999888631       1112445566777777777752111  2345667777


Q ss_pred             HHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEEe
Q 010250          408 APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMMS  479 (514)
Q Consensus       408 ~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi~  479 (514)
                      .+.+.+.|+++ ....  ....-|+++++.++......        ....++..++ ++||.+.++       .+++||+
T Consensus       301 r~~l~~~L~~~-~~~~--~~p~~g~f~~~~l~~~~~~~--------~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~  369 (405)
T PRK09148        301 RDVLVESFGRA-GWDI--PPPAASMFAWAPIPEAFRHL--------GSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIA  369 (405)
T ss_pred             HHHHHHHHHHc-CCcc--CCCCeeEEEEEECCCccCCC--------CHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEE
Confidence            77787777764 2111  11234667777775321100        0234666665 789999874       2469999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKALKATEERV  507 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l~~~~~~~  507 (514)
                        +..+++++++++++|.++++++.+.+
T Consensus       370 --~~~~~~~l~~al~~l~~~l~~~~~~~  395 (405)
T PRK09148        370 --LVENEQRIRQAARNIKRFLSSADETL  395 (405)
T ss_pred             --ecCCHHHHHHHHHHHHHHHHHHHHHH
Confidence              45789999999999999998776654

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.84  E-value=9e-19  Score=180.74  Aligned_cols=340  Identities=16%  Similarity=0.158  Sum_probs=204.0

Q ss_pred             ccCCCCCHHHHHHHHHHHhcCCc----cccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHh
Q 010250          112 TALGGSEPRLVAAATAQLNTLPF----YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN  187 (514)
Q Consensus       112 ~~lGh~~p~v~~A~~~~l~~~~~----~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~  187 (514)
                      .-+|.-++.+++|+.+.......    .+.......+...++.+.+++++   +.+.++|++||++|+..+++...    
T Consensus        27 ~~~~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~---g~~~~~~~~g~t~a~~~al~~l~----   99 (387)
T PRK09331         27 QRGGILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFL---GMDEARVTHGAREGKFAVMHSLC----   99 (387)
T ss_pred             hcCCCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHh---CCCcEEEeCCHHHHHHHHHHHhc----
Confidence            45788899999999988743221    11211223456788999999998   34678999999999999998764    


Q ss_pred             hcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh
Q 010250          188 ALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE  267 (514)
Q Consensus       188 ~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~  267 (514)
                          .++++|++...+|.+ ...++...|....            .++.+..+.           ...+.+++++.+.+.
T Consensus       100 ----~~gd~Vlv~~~~h~s-~~~~~~~~G~~~~------------~v~~~~~~~-----------~~~d~~~l~~~l~~~  151 (387)
T PRK09331        100 ----KKGDYVVLDGLAHYT-SYVAAERAGLNVR------------EVPKTGYPE-----------YKITPEAYAEKIEEV  151 (387)
T ss_pred             ----CCCCEEEECCCchHH-HHHHHHHcCCEEE------------EEeCccCcC-----------CCcCHHHHHHHHHHh
Confidence                334567776554433 3222222222111            111100000           012257777777542


Q ss_pred             ---CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhh
Q 010250          268 ---GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKAL  342 (514)
Q Consensus       268 ---~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l  342 (514)
                         ..+++++|+++.++++.|.+.|    +++|.++|++||+++|+|++|+ +|..+  +....+++  |++  +++|++
T Consensus       152 ~~~~~~~~~lV~l~~~~~~tG~~~~----l~~I~~la~~~g~~livD~a~~-~g~~~--~~~~~~g~--D~~~~s~~K~l  222 (387)
T PRK09331        152 KEETGKPPALALLTHVDGNYGNLAD----AKKVAKVAHEYGIPFLLNGAYT-VGRMP--VDGKKLGA--DFIVGSGHKSM  222 (387)
T ss_pred             hhccCCCCEEEEEECCCCCCccccc----HHHHHHHHHHcCCEEEEECCcc-cCCcC--CCHHHcCC--CEEEeeCcccc
Confidence               1135788888888888898887    9999999999999999999997 54332  12223344  555  567999


Q ss_pred             cCCcccceeEEeCHHHHHHhhhccCCCCcc---cccCCCCCcHHHHHHHHHHHHHHhhc-cHHHHHHHHHHHHHhhhhhc
Q 010250          343 SSAYMPIGAILVSPEVSEVIHSQSNTLGSF---SHGFTYSGHPVSCAVAIEALKIYKER-NIVEQVNKIAPKFQDGVKAF  418 (514)
Q Consensus       343 ~gG~~pig~v~~~~~i~~~l~~~~~~~~~~---~~~~t~~~~pl~~aaa~aal~~~~~~-~~~~~~~~~~~~l~~~L~~l  418 (514)
                      +++ .++|++++++++++.+..........   ..+++.  .+...++++++++.+.+. +..++..++.+++++.|+++
T Consensus       223 ~~~-~~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~l  299 (387)
T PRK09331        223 AAS-APSGVLATTEEYADKVFRTSRKFGVKEVELLGCTL--RGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDELEKI  299 (387)
T ss_pred             cCC-CCEEEEEECHHHHhhcccccCCCcccceeeeceec--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            876 68999999999888775422111000   011222  233445555666655432 34555677788888888876


Q ss_pred             cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CE-EEEeCCCCCCHHHHHHHHHHH
Q 010250          419 SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DN-IMMSPPFIMSPEEVDELISKY  496 (514)
Q Consensus       419 ~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~-iRi~p~~~~t~e~id~~~~~l  496 (514)
                      ....+..+-.....+..++.....   .........+..+.+.|.++||...+.+ .. +|+.. ..+|++|+++++++|
T Consensus       300 ~g~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~i~ri~~-~g~t~~di~~l~~aL  375 (387)
T PRK09331        300 EGFKQLGEKPRNHDLMKFETPSFD---EIAKKHKRRGFFLYEELKKRGIHGIKPGATKEFKLST-YGLTWEQVEYVADAF  375 (387)
T ss_pred             CCEEEeccCcCcCCeEEEeCCchh---HHhhhccccchhHHHHHHHcCceEEccCCceEEEEEe-ccCCHHHHHHHHHHH
Confidence            332222110112334444432100   0000000113458889999999854433 33 66665 458999999999999


Q ss_pred             HHHHHH
Q 010250          497 GKALKA  502 (514)
Q Consensus       497 ~~~l~~  502 (514)
                      ++++++
T Consensus       376 ~~i~~~  381 (387)
T PRK09331        376 KEIAEK  381 (387)
T ss_pred             HHHHHh
Confidence            988765

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.84  E-value=1.7e-19  Score=185.13  Aligned_cols=307  Identities=15%  Similarity=0.150  Sum_probs=181.6

Q ss_pred             chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250          144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK  223 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~  223 (514)
                      +...++.+.+++++   +.+.+++++||++++..++....        ..+++|++....|+. ...++...|.....  
T Consensus        51 ~~~~~~~e~lA~~~---g~~~~~i~~g~~~a~~~~~~~l~--------~~gd~Vl~~~~~h~s-~~~~~~~~g~~~~~--  116 (370)
T TIGR02539        51 PPIHDFLEDLAEFL---GMDEARVTHGAREGKFAVMHALC--------KEGDWVVLDGLAHYT-SYVAAERAGLNVKE--  116 (370)
T ss_pred             hHHHHHHHHHHHHh---CCCceEEECChHHHHHHHHHHhh--------CCCCEEEECCcccHH-HHHHHHHcCCEEEE--
Confidence            35667888899887   45678889999999999987664        234566665555433 32323333322110  


Q ss_pred             CCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC---CCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250          224 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG---PETIAAFIAEPVIGAGGVIPPPATYFEKVQAV  300 (514)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~---~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l  300 (514)
                                ++...           +.....++++|++.+.+..   .+++.+|+++.+++..|.+.+    +++|.++
T Consensus       117 ----------~~~~~-----------~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~----l~~i~~l  171 (370)
T TIGR02539       117 ----------VPHTG-----------HPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD----AGKVAKV  171 (370)
T ss_pred             ----------EecCC-----------cccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC----HHHHHHH
Confidence                      11000           0000112577877775321   124567777777788898887    9999999


Q ss_pred             HHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcc---ccc
Q 010250          301 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF---SHG  375 (514)
Q Consensus       301 ~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~---~~~  375 (514)
                      |++||+++|+||+|. +|..+..+    ....+|++  +++|++++| .|+|++++++++++.+.....++...   ..+
T Consensus       172 a~~~~~~livDea~~-~g~~~~~~----~~~~~di~v~s~sK~~~~~-g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~  245 (370)
T TIGR02539       172 CREKGVPLLLNCAYT-VGRMPVSA----KEIGADFIVGSGHKSMAAS-GPCGVLGMSEEWEDIVLRKSRYSPVKEVELLG  245 (370)
T ss_pred             HHHcCCeEEEECccc-cCCcCCCH----HHcCCCEEEeeCcccccCC-CCEEEEEECHHHHhhhcccccCCccceeeeec
Confidence            999999999999997 44332211    12235765  688999876 58999999999999887532211000   001


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhhc-cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccch
Q 010250          376 FTYSGHPVSCAVAIEALKIYKER-NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGI  454 (514)
Q Consensus       376 ~t~~~~pl~~aaa~aal~~~~~~-~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~  454 (514)
                      ++.  ...+++++.++++...+. +...+..++.++++++|+++ ...++......+.++.++++.....   ...+...
T Consensus       246 ~~~--~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~~---~~~~~~~  319 (370)
T TIGR02539       246 CTS--RGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHEI---AQKHKRR  319 (370)
T ss_pred             ccc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhHH---hhhhccc
Confidence            111  123455566666643221 11233334456888988876 2221111122344555544210000   0000001


Q ss_pred             HHHHHHHHHHCCcE-EEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          455 GAYFGAQCEKHGML-VRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       455 ~~~~~~~l~~~Gv~-~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      ...+.+.|+++||+ +++.. +.||++. ..+|++|+++++++|++++++
T Consensus       320 ~~~~~~~L~e~GI~~ir~~~~~~iRis~-~~~t~e~i~~l~~~L~~~~~~  368 (370)
T TIGR02539       320 GYFLYEELKKRGIHGIRSGQTKYFKLSV-YGLTKEQVEYVVDSFEEIVEE  368 (370)
T ss_pred             cHHHHHHHHhCCCccccCCcceEEEEEe-cCCCHHHHHHHHHHHHHHHHh
Confidence            34578899999997 66543 4799997 368999999999999988754

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>PRK08636 aspartate aminotransferase; Provisional

Probab=99.84  E-value=3.2e-18  Score=177.68  Aligned_cols=351  Identities=13%  Similarity=0.086  Sum_probs=202.8

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcC-CccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTL-PFYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEA  174 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~-~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA  174 (514)
                      .|..++||.++   .+.+..++.+.+++.+.+... ...++...+.......+++.+.+..+ ....+ ++++++++.+|
T Consensus        31 ~~~~~~~l~~g---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~a  107 (403)
T PRK08636         31 AGEDIIDFSMG---NPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEG  107 (403)
T ss_pred             cCCCEEEcCCc---CCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHH
Confidence            45678999777   334444667888877766432 11111112233444555555554432 13445 79999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCCCCChhHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHPGETEEEY  252 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  252 (514)
                      +..++++..        ..++.|++.+++|.+........+.. ..            .++.  .+.|.     .+.+. 
T Consensus       108 l~~~~~~l~--------~~gd~Vlv~~P~y~~~~~~~~~~g~~-~~------------~v~~~~~~~~~-----~d~~~-  160 (403)
T PRK08636        108 YVHLVQAIT--------NPGDVAIVPDPAYPIHSQAFILAGGN-VH------------KMPLEYNEDFE-----LDEDQ-  160 (403)
T ss_pred             HHHHHHHhC--------CCCCEEEEcCCCCcchHHHHHhcCCE-EE------------EEeccccccCc-----cChhh-
Confidence            999988663        34578999999998864333322221 10            0110  00010     00011 


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccCC
Q 010250          253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYSI  331 (514)
Q Consensus       253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~gv  331 (514)
                         ..+.+++++.+..++....+++.|. +.+|.+ .+.+-+++|.++|++|++++|.||+|..+-..+... ......-
T Consensus       161 ---l~~~l~~~~~~~~~~~~~i~~~~P~-NPTG~~-~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~  235 (403)
T PRK08636        161 ---FFENLEKALRESSPKPKYVVVNFPH-NPTTAT-VEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEG  235 (403)
T ss_pred             ---hhhHHHHHHhhccCCceEEEEeCCC-CCCCcc-CCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCC
Confidence               1235566665433333444444454 555544 466889999999999999999999998773333211 1111111


Q ss_pred             CCch----hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHH
Q 010250          332 KPDL----VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVN  405 (514)
Q Consensus       332 ~pDi----v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~  405 (514)
                      .+|.    -+|||.++..++++|++++++++++.+...       .....++.+.....++..+++...+  +++.+.++
T Consensus       236 ~~~~~i~~~S~SK~~~~~GlRiG~iv~~~~li~~~~~~-------~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~  308 (403)
T PRK08636        236 AKDVAVESYTLSKSYNMAGWRVGFVVGNKKLVGALKKI-------KSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYR  308 (403)
T ss_pred             ccccEEEEEecccccCCccceeeeeeCCHHHHHHHHHH-------HHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence            1232    258999864339999999999998887642       1111233444445555444431111  12345556


Q ss_pred             HHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEee-------CCEEE
Q 010250          406 KIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVS-------GDNIM  477 (514)
Q Consensus       406 ~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~-------g~~iR  477 (514)
                      ++.+.+.+.|++.   ++.......|+++++.+++.....        ....+...+ .++||.+.++       .++||
T Consensus       309 ~~~~~l~~~L~~~---~~~~~~p~~g~~~~~~l~~~~~~~--------~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iR  377 (403)
T PRK08636        309 KRRDVLIESFANA---GWELQKPRASMFVWAKIPEPARHL--------GSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVR  377 (403)
T ss_pred             HHHHHHHHHHHHC---CCcccCCCcceEEEEECCCccCCC--------CHHHHHHHHHHhCCEEEecchhhCcCCCCeEE
Confidence            6666677766653   221112234777888875421100        023466654 4689999875       25699


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      |+  +..+++++++++++|.++++.+
T Consensus       378 i~--~~~~~~~l~~~~~rl~~~l~~~  401 (403)
T PRK08636        378 IA--LIENENRIRQAARNIKKFLKEL  401 (403)
T ss_pred             EE--ecCCHHHHHHHHHHHHHHHHhh
Confidence            99  5578999999999999988653

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=99.84  E-value=1.5e-18  Score=179.44  Aligned_cols=341  Identities=11%  Similarity=0.098  Sum_probs=198.6

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEA  174 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA  174 (514)
                      +|+.++||..|.  ..++ .+|.+.+++.+.+..... .+....+..+....+++.+....+ ..+.+ .|++++++.+|
T Consensus        28 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~a  104 (388)
T PRK07366         28 AGKELIDLSLGS--SDLP-APAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEG  104 (388)
T ss_pred             cCCCeEEeCCCC--CCCC-CCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHH
Confidence            467789987774  3344 478899999887753211 111111222333344444433322 13455 69999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      +..+++...        ..++.|++.+++|.+........+.. ..            .++....      +    .+ .
T Consensus       105 l~~~~~~l~--------~~gd~Vlv~~P~y~~~~~~~~~~g~~-~~------------~v~~~~~------~----~~-~  152 (388)
T PRK07366        105 TAHLPLAVL--------NPGDFALLLDPGYPSHAGGVYLAGGQ-IY------------PMPLRAE------N----DF-L  152 (388)
T ss_pred             HHHHHHHhC--------CCCCEEEEcCCCCcchHHHHHhcCCE-EE------------EEECCCc------c----CC-C
Confidence            999888653        34578999999998875333322221 10            1111000      0    00 0


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCC-
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP-  333 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~p-  333 (514)
                      .+++++++.+.   + ++.++++.+.++.+|.+. +.+.+++|.++|++||+++|.||+|..|-..+...........+ 
T Consensus       153 ~d~~~l~~~~~---~-~~k~i~l~~p~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~  227 (388)
T PRK07366        153 PVFADIPTEVL---A-QARLMVLSYPHNPTTAIA-PLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPE  227 (388)
T ss_pred             CCHHHHHHhhc---c-cceEEEEeCCCCCCCccC-CHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCC
Confidence            01234443332   2 234455555567677654 67889999999999999999999999774333210011111111 


Q ss_pred             -c-hh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHH
Q 010250          334 -D-LV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNK  406 (514)
Q Consensus       334 -D-iv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~  406 (514)
                       + ++   +|||.++..++++|++++++++++.+....       ....++..+..+.++++++..-++  ++..+.+++
T Consensus       228 ~~~vi~~~SfSK~~g~~GlRiG~~v~~~~li~~l~~~~-------~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~  300 (388)
T PRK07366        228 KSVSIEFFTLSKSYNMGGFRIGFAIGNAQLIQALRQVK-------AVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQ  300 (388)
T ss_pred             cccEEEEeecccccCCcchhheehcCCHHHHHHHHHHH-------hhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence             2 22   799988643399999999999998886421       111222222233444555531111  234566777


Q ss_pred             HHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEee-------CCEEEE
Q 010250          407 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVS-------GDNIMM  478 (514)
Q Consensus       407 ~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~-------g~~iRi  478 (514)
                      +.+.+.+.|+++   ++......-|.++++.+.+....         ....+...+ .++||.+.++       .++|||
T Consensus       301 ~r~~l~~~L~~~---~~~~~~p~~g~f~~~~~~~~~~~---------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi  368 (388)
T PRK07366        301 RRDAFINALHQI---GWPVPLPEATMYVWAKLPEPWQG---------NSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRF  368 (388)
T ss_pred             HHHHHHHHHHHC---CCcccCCCeeEEEEEECCcccCC---------CHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEE
Confidence            777777777765   22112233577788887542100         023466666 5679999874       156999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~  499 (514)
                      +  +..+++++++++++|.+.
T Consensus       369 ~--~~~~~~~l~~~l~rl~~~  387 (388)
T PRK07366        369 A--LVHDPDILEEAVERIAAF  387 (388)
T ss_pred             E--ecCCHHHHHHHHHHHHHh
Confidence            9  567899999999999865

>PRK07681 aspartate aminotransferase; Provisional

Probab=99.84  E-value=1.3e-18  Score=180.53  Aligned_cols=335  Identities=11%  Similarity=0.079  Sum_probs=203.2

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-ccccccCCchHHHHHHHHHHhcC-cCCC-CeEEEeCChhHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWNRTTKPSLDLAKELLEMFT-ASKM-AKVFFTNSGSEA  174 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~~~~~~~~~~~ela~~L~~~~~-~~~~-~~v~~~~sGseA  174 (514)
                      .|..++||..|..  .++ .++.+.+++.+.+.....+ +.. .+..+....+++.+....+ .... ++|++++|+++|
T Consensus        30 ~~~~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~~y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a  105 (399)
T PRK07681         30 AGHKMIDLSIGNP--DMP-PADFVREEMVHTANQKESYGYTL-SGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDG  105 (399)
T ss_pred             cCCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhccccCCCCC-CCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHH
Confidence            3667899987742  244 4678888888877543222 111 2233334445555543322 1344 689999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      +..++++..        ..++.|++.+++|.+........+....             .++....          ..+ .
T Consensus       106 l~~~~~~~~--------~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~-------------~v~~~~~----------~~~-~  153 (399)
T PRK07681        106 LVHLPMVYA--------NPGDIILVPDPGYTAYETGIQMAGATSY-------------YMPLKKE----------NDF-L  153 (399)
T ss_pred             HHHHHHHhC--------CCCCEEEECCCCccchHHHHHhcCCEEE-------------EEecCCC----------CCC-c
Confidence            999887653        3357899999999876543332221111             0111000          000 0


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEc-cccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-e-ecccCC
Q 010250          255 RLANNLEDLILKEGPETIAAFIAE-PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-G-CDKYSI  331 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivE-pv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~-~~~~gv  331 (514)
                      .+++++++.+.    +++.+|++. | ++.+|.+. +++.+++|.++|++||+++|.||+|..|-..+... . ....+ 
T Consensus       154 ~d~~~l~~~~~----~~~k~v~l~~P-~NPTG~~~-s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~-  226 (399)
T PRK07681        154 PDLELIPEEIA----DKAKMMILNFP-GNPVPAMA-HEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPG-  226 (399)
T ss_pred             CCHHHHHHhcc----ccceEEEEeCC-CCCcCcCC-CHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCC-
Confidence            11355555443    234455554 6 55666554 57889999999999999999999999774333211 1 11111 


Q ss_pred             CCc----hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHH
Q 010250          332 KPD----LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVN  405 (514)
Q Consensus       332 ~pD----iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~  405 (514)
                      .+|    +-+|||.++..++++|++++++++++.+...       ....+++.+.+++.++.++|+.-.+  ++..+.++
T Consensus       227 ~~~~~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~-------~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~  299 (399)
T PRK07681        227 AKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQF-------KSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQ  299 (399)
T ss_pred             CcccEEEEeecccccCCccceeEEEecCHHHHHHHHHH-------HhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence            122    2378998874338999999999999888641       1123455667777777777753111  22345566


Q ss_pred             HHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-------CCEEE
Q 010250          406 KIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------GDNIM  477 (514)
Q Consensus       406 ~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-------g~~iR  477 (514)
                      ++.+.+.+.|++. ...+  .....|.++++.+.+..           ....+...+++ +||.+.++       .+.+|
T Consensus       300 ~~~~~l~~~L~~~-g~~~--~~p~~g~f~~~~l~~~~-----------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iR  365 (399)
T PRK07681        300 ERRDTLVDGFRTF-GWNV--DKPAGSMFVWAEIPKGW-----------TSLSFAYALMDRANVVVTPGHAFGPHGEGFVR  365 (399)
T ss_pred             HHHHHHHHHHHHC-CCcc--cCCCeeeEEEEECCCCC-----------CHHHHHHHHHHhCCEEEeCChhhCcCCCCeEE
Confidence            6677777777664 2111  11234777778775321           13457777776 89999864       14699


Q ss_pred             EeCCCCCCHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~  498 (514)
                      |+  +..+++++++++++|.+
T Consensus       366 is--~~~~~~~~~~~l~~l~~  384 (399)
T PRK07681        366 IA--LVQDEEVLQQAVENIRN  384 (399)
T ss_pred             EE--ecCCHHHHHHHHHHHHH
Confidence            99  55788999999999988

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=99.84  E-value=4.1e-18  Score=176.20  Aligned_cols=337  Identities=16%  Similarity=0.168  Sum_probs=204.2

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC----c-C-CCCeEEEeCChhH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT----A-S-KMAKVFFTNSGSE  173 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~----~-~-~~~~v~~~~sGse  173 (514)
                      ..+|||..|..  .++. ++.+.+++.+.+......+.    +.....++.+.+++++.    . . ..++|++++|+++
T Consensus        30 ~~~i~l~~~~~--~~~~-~~~~~~~~~~~~~~~~~~Y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~  102 (391)
T PRK07309         30 PGILKLTLGEP--DFTT-PDHVKEAAKRAIDANQSHYT----GMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATE  102 (391)
T ss_pred             CCeEEcCCCCC--CCCC-CHHHHHHHHHHHhcCCCCCC----CCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHH
Confidence            45899987753  3553 67788898887754211111    11122344455554432    1 1 2368999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHH
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEY  252 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  252 (514)
                      |+..++....        .+++.|++.+++|.+....... .|...            ..++.+ ..|.           
T Consensus       103 al~~~~~~~~--------~~gd~vl~~~p~y~~~~~~~~~-~g~~~------------~~~~~~~~~~~-----------  150 (391)
T PRK07309        103 ALSASLTAIL--------EPGDKVLLPAPAYPGYEPIVNL-VGAEI------------VEIDTTENDFV-----------  150 (391)
T ss_pred             HHHHHHHHhc--------CCCCEEEEeCCCCcchHHHHHH-cCCEE------------EEEecCCcCCc-----------
Confidence            9999988653        3456899999999886432221 12111            111110 0000           


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccCC
Q 010250          253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYSI  331 (514)
Q Consensus       253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~gv  331 (514)
                        .+.+++++.+... ++++.++++...++.+|.+. +.+.+++|.++|++||+++|+||++..|-..|... ...  ..
T Consensus       151 --~d~~~l~~~~~~~-~~~~~~i~l~~P~NPtG~~~-s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~--~~  224 (391)
T PRK07309        151 --LTPEMLEKAILEQ-GDKLKAVILNYPANPTGVTY-SREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIA--EY  224 (391)
T ss_pred             --CCHHHHHHHhhcc-CCCeEEEEEECCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHH--Hh
Confidence              1146777776532 23455666553356667544 55779999999999999999999998774334221 111  11


Q ss_pred             CCc-h-h--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccHHHHHH
Q 010250          332 KPD-L-V--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVN  405 (514)
Q Consensus       332 ~pD-i-v--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~~~~~~  405 (514)
                      .++ + +  +|||.++..++++|++++++++++.+...       ....+.+.+++++.++.+.|+...  ...+.++++
T Consensus       225 ~~~~~i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~  297 (391)
T PRK07309        225 LPDQTILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKS-------HQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYI  297 (391)
T ss_pred             ccCCEEEEecChhhccCccceeEEEEeCHHHHHHHHHH-------HhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHH
Confidence            223 2 2  68998874338999999999999888641       111233556777777777765311  123456677


Q ss_pred             HHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHH-HHHCCcEEEee-------CCEE
Q 010250          406 KIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVS-------GDNI  476 (514)
Q Consensus       406 ~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~-------g~~i  476 (514)
                      ++.+.+.+.|++.   .+ ..... -|.++++.+++....         ....+... +.++||.+.++       ++.|
T Consensus       298 ~~~~~~~~~l~~~---~~-~~~~p~gg~~~~~~l~~~~~~---------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~i  364 (391)
T PRK07309        298 KRRDYIIEKMTDL---GF-KIIKPDGAFYIFAKIPAGYNQ---------DSFKFLQDFARKKAVAFIPGAAFGPYGEGYV  364 (391)
T ss_pred             HHHHHHHHHHHHC---CC-eecCCCeeEEEEEECCCCCCC---------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEE
Confidence            7777788877764   21 11222 245556666432110         12345654 55789999864       2479


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          477 MMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       477 Ri~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      |++  +..+++++++++++|.++++++
T Consensus       365 Ri~--~~~~~~~l~~~i~~l~~~~~~~  389 (391)
T PRK07309        365 RLS--YAASMETIKEAMKRLKEYMEEH  389 (391)
T ss_pred             EEE--ecCCHHHHHHHHHHHHHHHHhh
Confidence            999  4567899999999999888654

>PRK08960 hypothetical protein; Provisional

Probab=99.84  E-value=2.8e-18  Score=177.27  Aligned_cols=337  Identities=11%  Similarity=0.083  Sum_probs=204.5

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDT  177 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~~  177 (514)
                      |..++|+..|..  .++ .++.+.+++.+.+......+....+..+....+++.+.+.++ ....+++++++++++|+..
T Consensus        31 ~~~~i~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~  107 (387)
T PRK08960         31 GHDVIHLEIGEP--DFT-TAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLL  107 (387)
T ss_pred             CCCeEEeCCCCC--CCC-CCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHH
Confidence            456788776643  233 478899999888864221111111222333344444433221 2356899999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCCCCChhHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGETEEEYSTR  255 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  255 (514)
                      ++.+..        .+++.|++.+++|.+........ +...            ..+++..  .|.             .
T Consensus       108 ~~~~~~--------~~gd~vlv~~p~y~~~~~~~~~~-g~~~------------~~v~~~~~~~~~-------------~  153 (387)
T PRK08960        108 ASSLLV--------DPGKHWLLADPGYPCNRHFLRLV-EGAA------------QLVPVGPDSRYQ-------------L  153 (387)
T ss_pred             HHHHhc--------CCCCEEEEcCCCCcchHHHHHhc-CCeE------------EEEecCcccCCC-------------C
Confidence            887653        34578999999998764322221 1111            1111110  000             1


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL  335 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi  335 (514)
                      +.+++++++.   ++...++++.|. +.+|.+. +.+.+++|.++|++||+++|+||+|.++-..+...  ....+.+++
T Consensus       154 d~~~l~~~~~---~~~~~i~i~~p~-NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~--~~~~~~~~v  226 (387)
T PRK08960        154 TPALVERHWN---ADTVGALVASPA-NPTGTLL-SRDELAALSQALRARGGHLVVDEIYHGLTYGVDAA--SVLEVDDDA  226 (387)
T ss_pred             CHHHHHHHhC---ccceEEEEECCC-CCCCcCc-CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC--ChhhccCCE
Confidence            1456666554   234566777775 4556554 56889999999999999999999998773322211  122344565


Q ss_pred             h---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH-Hhh--ccHHHHHHHHHH
Q 010250          336 V---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI-YKE--RNIVEQVNKIAP  409 (514)
Q Consensus       336 v---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~-~~~--~~~~~~~~~~~~  409 (514)
                      +   +|||.++..++++|++++++++++.+...       ....+.+.+.+++.++.++++. ..+  +...+.++++.+
T Consensus       227 i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~-------~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~  299 (387)
T PRK08960        227 FVLNSFSKYFGMTGWRLGWLVAPPAAVPELEKL-------AQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRD  299 (387)
T ss_pred             EEEeecccccCCcccEEEEEEcCHHHHHHHHHH-------HhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Confidence            5   48998874339999999999998887631       2223455677777777777642 110  123455666667


Q ss_pred             HHHhhhhhccCCCceeE-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee--------CCEEEEe
Q 010250          410 KFQDGVKAFSDSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS--------GDNIMMS  479 (514)
Q Consensus       410 ~l~~~L~~l~~~~~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~--------g~~iRi~  479 (514)
                      .+.+.|++.   ++... ...-|.++++++.+...          ....++..|+ ++||.+.|+        +++||++
T Consensus       300 ~l~~~L~~~---~~~~~~~p~g~~f~~~~~~~~~~----------~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~  366 (387)
T PRK08960        300 FLLPALREL---GFGIAVEPQGAFYLYADISAFGG----------DAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFA  366 (387)
T ss_pred             HHHHHHHhc---CCcCCcCCCeeEEEEEeccccCC----------CHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEE
Confidence            777777654   22111 12336677777753110          0345666665 689999864        2479999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      .  ..+.+++.+++++|.+++.
T Consensus       367 ~--~~~~~~l~~al~~l~~~~~  386 (387)
T PRK08960        367 Y--TQSLPRLQEAVERIARGLR  386 (387)
T ss_pred             e--cCCHHHHHHHHHHHHHHHh
Confidence            4  4578888888888887664

>PLN02656 tyrosine transaminase

Probab=99.84  E-value=5.1e-18  Score=176.45  Aligned_cols=346  Identities=15%  Similarity=0.123  Sum_probs=207.3

Q ss_pred             CCCCEEEEccCCcccccC-CCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcC-----cCCCCeEEEeC
Q 010250           97 VNGKKYLDSLAGLWCTAL-GGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-----ASKMAKVFFTN  169 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~l-Gh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~-----~~~~~~v~~~~  169 (514)
                      ..|+.+++|..|...... -..++.+++++.+.+.... ..+.    +.....++.+.+++++.     ....+++++++
T Consensus        28 ~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~----~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~  103 (409)
T PLN02656         28 ENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYA----PTVGLPQARRAIAEYLSRDLPYKLSLDDVFITS  103 (409)
T ss_pred             ccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCC----CCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeC
Confidence            367889999877432111 3357889999998886521 1111    11222345455555442     12457899999


Q ss_pred             ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCCCC
Q 010250          170 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHPGE  247 (514)
Q Consensus       170 sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  247 (514)
                      |+++|+..++....        ..++.|++.+++|.......... |...            ..++.  .+.|.      
T Consensus       104 G~~~al~~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~-g~~~------------~~i~~~~~~~~~------  156 (409)
T PLN02656        104 GCTQAIDVALSMLA--------RPGANILLPRPGFPIYELCAAFR-HLEV------------RYVDLLPEKGWE------  156 (409)
T ss_pred             ChHHHHHHHHHHHh--------CCCCeEEEeCCCCCcHHHHHHHc-CCEE------------EEEeCCCcCCCC------
Confidence            99999999988653        33468999999997653222211 1110            00111  00011      


Q ss_pred             ChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-ee
Q 010250          248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC  326 (514)
Q Consensus       248 ~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~  326 (514)
                             .+.+++++++.   ++..+++++.|. +.+|.+. +++.+++|.++|++||+++|+||+|.+|-..+..+ ..
T Consensus       157 -------~d~~~l~~~~~---~~~~~v~l~~P~-NPtG~~~-s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~  224 (409)
T PLN02656        157 -------VDLDAVEALAD---QNTVALVIINPG-NPCGNVY-SYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPM  224 (409)
T ss_pred             -------CCHHHHHHHhc---cCceEEEEECCC-CCCCCCC-CHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccH
Confidence                   11466666653   345667777774 4556554 56789999999999999999999999875444321 11


Q ss_pred             cccCCCCch---hchhhhhcCCcccceeEEeC--------HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250          327 DKYSIKPDL---VSFAKALSSAYMPIGAILVS--------PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY  395 (514)
Q Consensus       327 ~~~gv~pDi---v~~sK~l~gG~~pig~v~~~--------~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~  395 (514)
                      ..++-...+   -+|||.++..++++|+++++        +++++.+...       .. ...+.+.+++.++.++|+..
T Consensus       225 ~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~s~~~q~a~~~~l~~~  296 (409)
T PLN02656        225 GVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKY-------FD-ILGGPATFIQAAVPTILEQT  296 (409)
T ss_pred             HHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHHH-------Hh-hhcCCCHHHHHHHHHHHhcC
Confidence            111111122   26899855544999999983        5777777631       11 12245677888887777521


Q ss_pred             hh---ccHHHHHHHHHHHHHhhhhhccCCCcee-EEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250          396 KE---RNIVEQVNKIAPKFQDGVKAFSDSPIIG-EIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR  470 (514)
Q Consensus       396 ~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~-~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~  470 (514)
                      .+   ++..+.++++.+.+.+.|+++   +... ..+.. |+++++++.......  .   ......+...|.++||.+.
T Consensus       297 ~~~~~~~~~~~~~~~r~~~~~~L~~~---~~~~~~~~p~gg~~~w~~l~~~~~~~--~---~~~~~~~~~~l~~~gV~v~  368 (409)
T PLN02656        297 DESFFKKTINILKQSSDICCDRIKEI---PCITCPHKPEGSMAVMVKLNLSLLED--I---SDDIDFCFKLAREESVIIL  368 (409)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhhC---CCCcCCcCCCeEEEEEEecchhhcCC--C---CCHHHHHHHHHHhCCEEEe
Confidence            11   223556666677777777664   2211 12233 566777764321000  0   0012234567788999999


Q ss_pred             eeC-----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          471 VSG-----DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       471 ~~g-----~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      |+.     +.+||+  +..+++++++++++|++++.+.
T Consensus       369 pg~~fg~~~~iRi~--~~~~~e~l~eal~rl~~~~~~~  404 (409)
T PLN02656        369 PGTAVGLKNWLRIT--FAADPSSLEEALGRIKSFYLRH  404 (409)
T ss_pred             cchhcCCCCeEEEE--eCCCHHHHHHHHHHHHHHHHHh
Confidence            762     479999  5678999999999999988654

>PRK08363 alanine aminotransferase; Validated

Probab=99.84  E-value=3e-18  Score=177.65  Aligned_cols=346  Identities=11%  Similarity=0.113  Sum_probs=203.9

Q ss_pred             CCCEEEEccCCcccc-cCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----C-cCCCCeEEEeCCh
Q 010250           98 NGKKYLDSLAGLWCT-ALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----T-ASKMAKVFFTNSG  171 (514)
Q Consensus        98 dG~~ylD~~s~~~~~-~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~-~~~~~~v~~~~sG  171 (514)
                      +|+.++|+..|.... .++ .++.+.+++.+.+......+.    +.....+|.+.+++++    + ..+.+++++++|+
T Consensus        28 ~~~~~i~l~~g~p~~~~~~-p~~~~~~~~~~~~~~~~~~Y~----~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~  102 (398)
T PRK08363         28 KGIKVIRLNIGDPVKFDFQ-PPEHMKEAYCRAIKEGHNYYG----PSEGLPELREAIVKREKRKNGVDITPDDVRVTAAV  102 (398)
T ss_pred             cCCCeEEEeCCCCCcCCCC-CCHHHHHHHHHHHHcCCCCCC----CCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCH
Confidence            467899998886432 344 478899999888764321111    1223345555555554    2 2355789999999


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhH
Q 010250          172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE  251 (514)
Q Consensus       172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (514)
                      ++|+..++....        ..++.|++.+++|.+........+......       +   ..+ ++.|.          
T Consensus       103 ~~al~~~~~~~~--------~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~-------~---~~~-~~~~~----------  153 (398)
T PRK08363        103 TEALQLIFGALL--------DPGDEILIPGPSYPPYTGLVKFYGGVPVEY-------R---TIE-EEGWQ----------  153 (398)
T ss_pred             HHHHHHHHHHhC--------CCCCEEEEcCCCCcchHHHHHHcCCEEEEe-------c---ccc-ccCCc----------
Confidence            999999987663        345789999999987643332222211100       0   000 00000          


Q ss_pred             HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC
Q 010250          252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI  331 (514)
Q Consensus       252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv  331 (514)
                         .+.+++++.+.   ++....+++.| ++.+|.+. +.+.+++|.++|++||+++|+||+|..+-..+.........-
T Consensus       154 ---~d~~~l~~~~~---~~~~~v~l~~p-~NPtG~~~-~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~~~~~~~~  225 (398)
T PRK08363        154 ---PDIDDIRKKIT---EKTKAIAVINP-NNPTGALY-EKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGSLTK  225 (398)
T ss_pred             ---CCHHHHHhhCC---cceEEEEEECC-CCCCCcCc-CHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCcccCHHHcCc
Confidence               11355655543   23334455555 55566554 567899999999999999999999986633332111111111


Q ss_pred             CCchh---chhhhhcCCcccceeEEe--CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHH
Q 010250          332 KPDLV---SFAKALSSAYMPIGAILV--SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQV  404 (514)
Q Consensus       332 ~pDiv---~~sK~l~gG~~pig~v~~--~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~  404 (514)
                      ...++   +|||.++.+++++|++++  ++++++.+....   .. ....+++.+.++..++.++|+...+  ++..+++
T Consensus       226 ~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~---~~-~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~  301 (398)
T PRK08363        226 DVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAI---DK-LARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKL  301 (398)
T ss_pred             CCcEEEEecchhccCCccceEEEEEEeCcHHHHHHHHHHH---HH-HhcccccCChHHHHHHHHHHhCChHHHHHHHHHH
Confidence            12233   789986544499999997  666666554210   00 0112355677777777777742111  2345667


Q ss_pred             HHHHHHHHhhhhhccCCCceeEEEeeee-eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-------CEE
Q 010250          405 NKIAPKFQDGVKAFSDSPIIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------DNI  476 (514)
Q Consensus       405 ~~~~~~l~~~L~~l~~~~~~~~v~g~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-------~~i  476 (514)
                      +++.+++.+.|+++   +.+......|. ++++.+.......        ..+.+...|.++||.+.++.       ++|
T Consensus       302 ~~~~~~l~~~L~~~---~~~~~~~p~g~~~~~~~l~~~~~~~--------~~~~~~~~l~~~gV~v~~g~~f~~~~~~~i  370 (398)
T PRK08363        302 KERRDYIYKRLNEI---PGISTTKPQGAFYIFPRIEEGPWKD--------DKEFVLDVLHEAHVLFVHGSGFGEYGAGHF  370 (398)
T ss_pred             HHHHHHHHHHHhcC---CCCEecCCCeEEEEEEEeccCCCCC--------HHHHHHHHHHhCCEEEeCchhhCCCCCCeE
Confidence            77777777777654   22222233444 4444665311000        12223455688999998642       469


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          477 MMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       477 Ri~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      |++  +..+++++++++++|.+++.+
T Consensus       371 Ris--~~~~~~~l~~~l~~l~~~~~~  394 (398)
T PRK08363        371 RLV--FLPPVEILEEAMDRFEEFMRE  394 (398)
T ss_pred             EEE--ecCCHHHHHHHHHHHHHHHHH
Confidence            999  567899999999999988765

>PRK06348 aspartate aminotransferase; Provisional

Probab=99.83  E-value=3.6e-18  Score=176.20  Aligned_cols=335  Identities=16%  Similarity=0.161  Sum_probs=200.8

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhc-CCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNT-LPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQ  178 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~-~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~~A  178 (514)
                      .++||..|..  .++ .+|++.+++.+.+.. ...| ....+.......+++.+....+ ....+++++++|+++|+..+
T Consensus        30 ~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~Y-~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~  105 (384)
T PRK06348         30 DIIDLSLGDP--DLI-TDESIINAAFEDAKKGHTRY-TDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLA  105 (384)
T ss_pred             CcEEcCCCCC--CCC-CCHHHHHHHHHHHhcCCCCC-CCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHH
Confidence            4688877632  344 367787776665433 2222 1111122333344444433321 23568999999999999999


Q ss_pred             HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250          179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN  258 (514)
Q Consensus       179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (514)
                      +....        .+++.|++.+++|.+........+....             .++..+.          +.+ ..+++
T Consensus       106 ~~~~~--------~~gd~vlv~~p~y~~~~~~~~~~g~~~~-------------~~~~~~~----------~~~-~~d~~  153 (384)
T PRK06348        106 LQSIL--------DPGDEVIIHEPYFTPYKDQIEMVGGKPI-------------ILETYEE----------DGF-QINVK  153 (384)
T ss_pred             HHHhc--------CCCCEEEEeCCCCcchHHHHHHcCCEEE-------------EecCCcC----------cCC-cCCHH
Confidence            88763        3456899999999876543333222111             0110000          000 01246


Q ss_pred             HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee-cccCCCCchh-
Q 010250          259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKYSIKPDLV-  336 (514)
Q Consensus       259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~-~~~gv~pDiv-  336 (514)
                      ++++.+.   ++..+.++..| ++.+|.+. +.+.+++|.++|++||+++|.||+|.+|...+..... ...+..+.++ 
T Consensus       154 ~l~~~~~---~~~~~v~l~~p-~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~  228 (384)
T PRK06348        154 KLEALIT---SKTKAIILNSP-NNPTGAVF-SKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATLAGMPERTIT  228 (384)
T ss_pred             HHHHhhC---cCccEEEEeCC-CCCCCcCC-CHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhcCCCcCcEEE
Confidence            7777664   22234444545 55666554 6788999999999999999999999987432221111 1112222332 


Q ss_pred             --chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 010250          337 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQ  412 (514)
Q Consensus       337 --~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~  412 (514)
                        +|||.++..++++|++++++++++.+..       .....+++.++++..++..+|+..++  +.+.+.++++.+.+.
T Consensus       229 ~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~  301 (384)
T PRK06348        229 FGSFSKDFAMTGWRIGYVIAPDYIIETAKI-------INEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAY  301 (384)
T ss_pred             EecchhccCCccccceeeecCHHHHHHHHH-------HHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence              6899887323899999999999888763       12234567788888888777753221  234556666777777


Q ss_pred             hhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeC-------CEEEEeCCCC
Q 010250          413 DGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-------DNIMMSPPFI  483 (514)
Q Consensus       413 ~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g-------~~iRi~p~~~  483 (514)
                      +.|+.+   +.+..... -|.++++.+.....          ....++..|+ +.||.+.++.       +.||++  +.
T Consensus       302 ~~L~~~---~~~~~~~p~gg~~~~~~~~~~~~----------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~  366 (384)
T PRK06348        302 KRIESI---PNLSLHPPKGSIYAFINIKKTGL----------SSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLA--CT  366 (384)
T ss_pred             HHHhcC---CCceeccCCeeEEEEEecccCCC----------CHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEE--ec
Confidence            777654   22222223 35566777753211          1345777776 5799998642       469999  56


Q ss_pred             CCHHHHHHHHHHHHH
Q 010250          484 MSPEEVDELISKYGK  498 (514)
Q Consensus       484 ~t~e~id~~~~~l~~  498 (514)
                      .+++++++++++|.+
T Consensus       367 ~~~~~l~~al~~l~~  381 (384)
T PRK06348        367 VGIEVLEEAFNRIEK  381 (384)
T ss_pred             CCHHHHHHHHHHHHh
Confidence            789999999998865

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.83  E-value=1.5e-18  Score=178.46  Aligned_cols=326  Identities=13%  Similarity=0.128  Sum_probs=201.3

Q ss_pred             CCCCCHHHHHHHHHHHhcCCcc-cc-cc---ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhh
Q 010250          114 LGGSEPRLVAAATAQLNTLPFY-HS-FW---NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA  188 (514)
Q Consensus       114 lGh~~p~v~~A~~~~l~~~~~~-~~-~~---~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~  188 (514)
                      .|..+|.+.+++.+.++..... ++ .+   ........++.+.+++++.....+++++++|+++|+..+++.+..    
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~----   83 (373)
T cd06453           8 TSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGR----   83 (373)
T ss_pred             ccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhh----
Confidence            5667899999999887543211 11 10   011234456778888888533256899999999999999987641    


Q ss_pred             cCCCCccEEEEEecCCccccee---eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHH
Q 010250          189 LGRPNKKKFIARQKSYHGSTLI---AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLIL  265 (514)
Q Consensus       189 ~~~~~~~~ii~~~~~yHG~t~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~  265 (514)
                       ...++++||+.+..|.+....   .....|..            +..++....+             ..+++++++.+.
T Consensus        84 -~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~-------------~~d~~~l~~~l~  137 (373)
T cd06453          84 -ANKPGDEIVTSVMEHHSNIVPWQQLAERTGAK------------LKVVPVDDDG-------------QLDLEALEKLLT  137 (373)
T ss_pred             -cCCCCCEEEECcchhHHHHHHHHHHHhhcCcE------------EEEeecCCCC-------------CcCHHHHHHHhc
Confidence             001346788877666542110   01011111            0111111000             012577777764


Q ss_pred             HhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhc
Q 010250          266 KEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALS  343 (514)
Q Consensus       266 ~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~  343 (514)
                          +++.+|++..+++..|.+.+    +++|.++|++||+++|+|++++ +|..    ........+|++++|  |.++
T Consensus       138 ----~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~li~D~a~~-~~~~----~~~~~~~~~d~~~~s~~K~~~  204 (373)
T cd06453         138 ----ERTKLVAVTHVSNVLGTINP----VKEIGEIAHEAGVPVLVDGAQS-AGHM----PVDVQDLGCDFLAFSGHKMLG  204 (373)
T ss_pred             ----CCceEEEEeCcccccCCcCC----HHHHHHHHHHcCCEEEEEhhhh-cCce----eeeccccCCCEEEeccccccC
Confidence                35678888777778898877    8999999999999999999987 4332    122223457998887  9987


Q ss_pred             CCcccceeEEeCHHHHHHhhhccCCC---Ccc-cccC----------CCCCcHHHHHHHHHHHHHHhhcc---HHHHHHH
Q 010250          344 SAYMPIGAILVSPEVSEVIHSQSNTL---GSF-SHGF----------TYSGHPVSCAVAIEALKIYKERN---IVEQVNK  406 (514)
Q Consensus       344 gG~~pig~v~~~~~i~~~l~~~~~~~---~~~-~~~~----------t~~~~pl~~aaa~aal~~~~~~~---~~~~~~~  406 (514)
                      +  .++|++++++++++.+.+.....   ... ....          ....+..+..+..++++.+.+.+   +.++.++
T Consensus       205 ~--~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~  282 (373)
T cd06453         205 P--TGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHE  282 (373)
T ss_pred             C--CCcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            6  56899999999887775321000   000 0000          01233344555556777776543   4666777


Q ss_pred             HHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------------C
Q 010250          407 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------------G  473 (514)
Q Consensus       407 ~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------------g  473 (514)
                      +.+++++.|+++....++......+.++.+.+...            ....+.+.|.++||.+.++             .
T Consensus       283 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~  350 (373)
T cd06453         283 LTAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGI------------HPHDVATILDQYGIAVRAGHHCAQPLMRRLGVP  350 (373)
T ss_pred             HHHHHHHHHhcCCCeEEeCCccccCCeEEEEECCc------------CHHHHHHHHHHCCEEeccCccchhHHHHHhCCC
Confidence            77888888876522222222223455666665421            1346778899999988632             2


Q ss_pred             CEEEEeCCCCCCHHHHHHHHHHH
Q 010250          474 DNIMMSPPFIMSPEEVDELISKY  496 (514)
Q Consensus       474 ~~iRi~p~~~~t~e~id~~~~~l  496 (514)
                      +.||+++...+|++|+|++++.|
T Consensus       351 ~~iRis~~~~~t~~di~~~~~~l  373 (373)
T cd06453         351 GTVRASFGLYNTEEEIDALVEAL  373 (373)
T ss_pred             CeEEEEecCCCCHHHHHHHHhhC
Confidence            47999999999999999999864

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.83  E-value=1.3e-18  Score=177.48  Aligned_cols=322  Identities=14%  Similarity=0.216  Sum_probs=199.4

Q ss_pred             CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC-CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccE
Q 010250          118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK-MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK  196 (514)
Q Consensus       118 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~-~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~  196 (514)
                      +|.|.+++.....   +....+   .+...++.+.++++++... ...+++++||+++++.++....        +++++
T Consensus        11 ~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~--------~~~~~   76 (355)
T TIGR03301        11 SATVRDAMLVDWC---HWDSEF---NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV--------PRDGK   76 (355)
T ss_pred             CHHHHHHhhhhcc---CCCHHH---HHHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc--------CCCCe
Confidence            5666666655221   111111   2566788889999875322 2368889999999999998763        33467


Q ss_pred             EEEEecCCcccceee-eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250          197 FIARQKSYHGSTLIA-ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF  275 (514)
Q Consensus       197 ii~~~~~yHG~t~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav  275 (514)
                      +|+.++++++..... ...-|.+.            ..++.++.+             ..+.+++++.+.+.  .++..+
T Consensus        77 vi~~~~~~~~~~~~~~a~~~g~~~------------~~i~~~~~~-------------~~d~~~l~~~l~~~--~~~~~v  129 (355)
T TIGR03301        77 LLVLINGAYGERLAKICEYLGIPH------------TDLNFSEYE-------------PPDLNRIEEALAAD--PDITHV  129 (355)
T ss_pred             EEEECCCchhhHHHHHHHHcCCce------------EEEecCCCC-------------CCCHHHHHHHHHhC--CCceEE
Confidence            777777777653211 11111111            111111110             01157788877542  234445


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccceeEE
Q 010250          276 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAIL  353 (514)
Q Consensus       276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~  353 (514)
                      ++-..++.+|.+.|    +++|.++|++||+++|+|++++ +|..  .+....++  .|++  +++|+++|+ ..+|+++
T Consensus       130 ~~~~~~~~~G~~~~----~~~i~~l~~~~~~~livD~~~s-~g~~--~~~~~~~~--~d~~~~s~~K~l~~~-~G~g~~~  199 (355)
T TIGR03301       130 ATVHHETTTGILNP----LEAIAKVARSHGAVLIVDAMSS-FGAI--PIDIEELD--VDALIASANKCLEGV-PGFGFVI  199 (355)
T ss_pred             EEEecCCcccchhH----HHHHHHHHHHcCCEEEEEeccc-cCCc--ccchhhcC--ccEEEecCCcccccC-CceeEEE
Confidence            44445566788876    8999999999999999999887 6532  22333333  4554  677998765 4579999


Q ss_pred             eCHHHHHHhhhccCCCC-cc---------cccCCCCCcHHHHHHHHHHHHHHhhcc----HHHHHHHHHHHHHhhhhhcc
Q 010250          354 VSPEVSEVIHSQSNTLG-SF---------SHGFTYSGHPVSCAVAIEALKIYKERN----IVEQVNKIAPKFQDGVKAFS  419 (514)
Q Consensus       354 ~~~~i~~~l~~~~~~~~-~~---------~~~~t~~~~pl~~aaa~aal~~~~~~~----~~~~~~~~~~~l~~~L~~l~  419 (514)
                      +++++++.+........ .+         .....+..++.++.++.++++.+.+++    ..++++++.+++++.|+++ 
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-  278 (355)
T TIGR03301       200 ARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-  278 (355)
T ss_pred             ECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-
Confidence            99999888752110000 00         001234567777777788888775433    4567788888999988775 


Q ss_pred             CCCceeE-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC----CEEEEeCCCCCCHHHHHHHHH
Q 010250          420 DSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG----DNIMMSPPFIMSPEEVDELIS  494 (514)
Q Consensus       420 ~~~~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g----~~iRi~p~~~~t~e~id~~~~  494 (514)
                      ...++.. ....+.++.+.++.... .        ....+.+.|.++|+++.+.+    +.|||+++..++++|++++++
T Consensus       279 g~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~i~~~~~  349 (355)
T TIGR03301       279 GFQPLLPERWQSPIIVSFLYPDDPD-F--------DFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAADIERLLE  349 (355)
T ss_pred             CCeeecCCCCCCCcEEEEECCCCCc-c--------hHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHHHHHHHH
Confidence            2222211 12234455666543110 0        13468889999999998753    579999988899999999999


Q ss_pred             HHHHHH
Q 010250          495 KYGKAL  500 (514)
Q Consensus       495 ~l~~~l  500 (514)
                      .|++++
T Consensus       350 ~l~~~~  355 (355)
T TIGR03301       350 AIKDAL  355 (355)
T ss_pred             HHHhhC
Confidence            998753

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=99.83  E-value=1.4e-18  Score=181.76  Aligned_cols=343  Identities=15%  Similarity=0.109  Sum_probs=209.4

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-ccccc----cCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWN----RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE  173 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~~~~----~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse  173 (514)
                      +..|||..+.      |..++.|.+++.+.+...... +....    ...+...++.+.++++++....++|+|++++++
T Consensus        32 ~~iyLd~a~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~~v~~t~g~t~  105 (424)
T PLN02855         32 KLVYLDNAAT------SQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSREIVFTRNATE  105 (424)
T ss_pred             CeEEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCCEEEEeCCHHH
Confidence            3578886332      446788999998877543211 11000    012234577788888885433478999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee---ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE  250 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~---~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (514)
                      ++..+++......   - ..+++|++.+..|++......   ...|...            ..++....      +    
T Consensus       106 al~~i~~~~~~~~---~-~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v------------~~v~~~~~------~----  159 (424)
T PLN02855        106 AINLVAYTWGLAN---L-KPGDEVILSVAEHHSNIVPWQLVAQKTGAVL------------KFVGLTPD------E----  159 (424)
T ss_pred             HHHHHHHHhhhhc---C-CCcCEEEECCCccHHHHHHHHHHHHHcCCEE------------EEEecCCC------C----
Confidence            9998887531000   1 234678888777765321111   0111111            01111000      0    


Q ss_pred             HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250          251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS  330 (514)
Q Consensus       251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g  330 (514)
                         ..+.+++++.+.    .++.+|++..+++.+|.+.|    +++|.++|+++|+++|+|++|. +|..    .++...
T Consensus       160 ---~~~~~~l~~~i~----~~t~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~a~~-~g~~----~~~~~~  223 (424)
T PLN02855        160 ---VLDVEQLKELLS----EKTKLVATHHVSNVLGSILP----VEDIVHWAHAVGAKVLVDACQS-VPHM----PVDVQT  223 (424)
T ss_pred             ---CcCHHHHHHHhc----cCceEEEEeCccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCc----CCCchh
Confidence               012467777664    35678888888888999988    8999999999999999999996 5432    122223


Q ss_pred             CCCchhc--hhhhhcCCcccceeEEeCHHHHHHhhhccCCCCc----c---------cccCCC-CCcHHHHHHHHHHHHH
Q 010250          331 IKPDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS----F---------SHGFTY-SGHPVSCAVAIEALKI  394 (514)
Q Consensus       331 v~pDiv~--~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~----~---------~~~~t~-~~~pl~~aaa~aal~~  394 (514)
                      ..+|+++  +.| +.|+ ..+|++++++++++.+.+.......    +         ...... +.+..+.++..++++.
T Consensus       224 ~~~d~~~~s~~K-~~gp-~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~  301 (424)
T PLN02855        224 LGADFLVASSHK-MCGP-TGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDY  301 (424)
T ss_pred             cCCCEEEeeccc-ccCC-CccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHH
Confidence            3468774  569 4443 3589999999988776432000000    0         000111 2344556666677777


Q ss_pred             Hhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEE----EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-C
Q 010250          395 YKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI----RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-G  466 (514)
Q Consensus       395 ~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v----~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-G  466 (514)
                      +.+   +++.++..++.+++++.|+++....+....    ...+.++.+.+....            ...+...|.++ |
T Consensus       302 ~~~~g~~~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~------------~~~v~~~L~~~~g  369 (424)
T PLN02855        302 LSEIGMDRIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIH------------PTDLSTFLDQQHG  369 (424)
T ss_pred             HHHhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcC------------HHHHHHHhcccCC
Confidence            655   345677888888888888765322222211    123456666654211            34577788777 9


Q ss_pred             cEEEeeC-------------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          467 MLVRVSG-------------DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       467 v~~~~~g-------------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      |.++.+.             ..||++++...|++||+++++.|+++++.+
T Consensus       370 I~v~~g~~c~~~~~~~~g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~  419 (424)
T PLN02855        370 VAIRSGHHCAQPLHRYLGVNASARASLYFYNTKEEVDAFIHALKDTIAFF  419 (424)
T ss_pred             EEEechhhhhHHHHHHhCCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHH
Confidence            9887421             469999999999999999999999988664

>PRK07777 aminotransferase; Validated

Probab=99.83  E-value=3.3e-18  Score=176.75  Aligned_cols=340  Identities=13%  Similarity=0.082  Sum_probs=199.0

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCC-eEEEeCChhHHHHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMA-KVFFTNSGSEANDTQ  178 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~-~v~~~~sGseA~~~A  178 (514)
                      .++||..|...  .. .++.+.+++.+.+......+....+.......+++.+.+.++. ...+ ++++++||++|+..+
T Consensus        25 ~~i~l~~g~p~--~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~  101 (387)
T PRK07777         25 GAVNLGQGFPD--ED-GPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAA  101 (387)
T ss_pred             CeEEccCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHH
Confidence            56898877542  22 3577888887777542211111122223333444444444421 1233 699999999999988


Q ss_pred             HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250          179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN  258 (514)
Q Consensus       179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (514)
                      +....        .++++|++..++|++........ +....            .++..+.      +   ..+ ..+++
T Consensus       102 ~~~~~--------~~gd~vli~~p~y~~~~~~~~~~-g~~~~------------~~~~~~~------~---~~~-~~d~~  150 (387)
T PRK07777        102 VLGLV--------EPGDEVLLIEPYYDSYAAVIAMA-GAHRV------------PVPLVPD------G---RGF-ALDLD  150 (387)
T ss_pred             HHHhc--------CCCCEEEEeCCCchhhHHHHHHC-CCEEE------------EeecCCc------c---CCC-cCCHH
Confidence            87542        33568999999998764222211 11100            0111000      0   000 01246


Q ss_pred             HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceecc-cCCC-Cch
Q 010250          259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDK-YSIK-PDL  335 (514)
Q Consensus       259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~-~gv~-pDi  335 (514)
                      ++++.+.    +++.+|++.+.++.+|.+. +++.+++|.++|++||+++|+||+|.++...+.. ..... .+.. .++
T Consensus       151 ~l~~~~~----~~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i  225 (387)
T PRK07777        151 ALRAAVT----PRTRALIVNSPHNPTGTVL-TAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTV  225 (387)
T ss_pred             HHHHhcC----cccEEEEEcCCCCCCCccC-CHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEE
Confidence            6666553    2455666666677788765 6688999999999999999999999877433321 11111 1211 122


Q ss_pred             --hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccHHHHHHHHHHHH
Q 010250          336 --VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIAPKF  411 (514)
Q Consensus       336 --v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~~~~~~~~~~~l  411 (514)
                        .+|||.++..++++|++++++++++.+...       ....++..+...+.++..+++..+  .+.+.+.++++.+.+
T Consensus       226 ~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l  298 (387)
T PRK07777        226 TISSAAKTFNVTGWKIGWACGPAPLIAAVRAA-------KQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRL  298 (387)
T ss_pred             EEeechhhccCcCceeEEEecCHHHHHHHHHH-------HhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHH
Confidence              368999974338999999999998887642       122244444444444444453211  123567788888888


Q ss_pred             HhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeC----------CEEEEeC
Q 010250          412 QDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG----------DNIMMSP  480 (514)
Q Consensus       412 ~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g----------~~iRi~p  480 (514)
                      .+.|+++ .....  ...-|.++++.+......         ....+++.|+ ++||.+.++.          +.+||+ 
T Consensus       299 ~~~L~~~-~~~~~--~~~g~~~~~~~~~~~~~~---------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~-  365 (387)
T PRK07777        299 AAGLAEA-GFEVH--DSAGTYFLCADPRPLGYD---------DGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFA-  365 (387)
T ss_pred             HHHHHhC-CCCcc--CCCcceEEEecccccCCC---------CHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEE-
Confidence            8888775 22211  111244556665421100         1356788886 5799997641          369999 


Q ss_pred             CCCCCHHHHHHHHHHHHHHH
Q 010250          481 PFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       481 ~~~~t~e~id~~~~~l~~~l  500 (514)
                       +..+++++++++++|.+..
T Consensus       366 -~~~~~~~l~~~l~~l~~~~  384 (387)
T PRK07777        366 -FCKRDDTLDEAIRRLRALR  384 (387)
T ss_pred             -ecCCHHHHHHHHHHHHHHh
Confidence             5668999999999998754

>PRK09082 methionine aminotransferase; Validated

Probab=99.83  E-value=2.4e-18  Score=177.70  Aligned_cols=337  Identities=12%  Similarity=0.063  Sum_probs=204.2

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCC-CeEEEeCChhHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKM-AKVFFTNSGSEANDT  177 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~-~~v~~~~sGseA~~~  177 (514)
                      +.++||..|..  .++ .+|.+.+++.+.++.....+....+..+....+++++.+.+.. .+. +++++++||++|+..
T Consensus        30 ~~~i~l~~g~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~  106 (386)
T PRK09082         30 HGAINLSQGFP--DFD-GPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFA  106 (386)
T ss_pred             CCEEEecCCCC--CCC-CCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHH
Confidence            45789887743  233 4788999998877643222222233445566777777766532 122 369999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      +++...        ..+++|++.+++|.+........ |...            ..++...           +.+ ..+.
T Consensus       107 ~~~~~~--------~~gd~Vli~~p~y~~~~~~~~~~-g~~~------------~~~~~~~-----------~~~-~~d~  153 (386)
T PRK09082        107 AILALV--------RPGDEVIVFDPSYDSYAPAIELA-GGRA------------VRVALQP-----------PDF-RVDW  153 (386)
T ss_pred             HHHHHc--------CCCCEEEEeCCCchhhHHHHHHc-CCEE------------EEEecCc-----------ccc-cCCH
Confidence            997653        33568999999887653222211 1111            0111100           000 1124


Q ss_pred             HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc--eecccCCCCch
Q 010250          258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF--GCDKYSIKPDL  335 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~--~~~~~gv~pDi  335 (514)
                      +++++.+.    +++.+|++...++.+|.+. +++.+++|.++|++||+++|+||+|..+-..+..+  .....+..+.+
T Consensus       154 ~~l~~~~~----~~~~~v~l~~p~NPtG~~~-~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~  228 (386)
T PRK09082        154 QRFAAAIS----PRTRLIILNTPHNPSGTVW-SAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERA  228 (386)
T ss_pred             HHHHHhcC----ccceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcE
Confidence            56666653    2345555555566677554 46789999999999999999999998663333211  11222222233


Q ss_pred             h---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHH
Q 010250          336 V---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPK  410 (514)
Q Consensus       336 v---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~  410 (514)
                      +   +|||.++..++++|++++++++++.+...       .....++.+.+++.++.+.++...+  +++.+.++++.+.
T Consensus       229 i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~  301 (386)
T PRK09082        229 FVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKV-------HQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDR  301 (386)
T ss_pred             EEEeechhhccchhhhhhhhhCCHHHHHHHHHH-------HhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence            3   68999864349999999999999888642       1123455667776666555542111  2245566777788


Q ss_pred             HHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEeeC---------CEEEEeC
Q 010250          411 FQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVSG---------DNIMMSP  480 (514)
Q Consensus       411 l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g---------~~iRi~p  480 (514)
                      +.+.|++. ....  ....-|.++++++.+....         -...+++.| .++||.+.|+.         +.+||+ 
T Consensus       302 ~~~~L~~~-~~~~--~~~~g~~~~~~~~~~~~~~---------~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~-  368 (386)
T PRK09082        302 FRAALANS-RFKL--LPCEGTYFQLVDYSAISDL---------DDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLC-  368 (386)
T ss_pred             HHHHHHhC-CCcc--cCCCeeEEEEEeccccCCC---------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEE-
Confidence            88888764 1111  1122355677777531100         134576765 57899988641         469999 


Q ss_pred             CCCCCHHHHHHHHHHHHH
Q 010250          481 PFIMSPEEVDELISKYGK  498 (514)
Q Consensus       481 ~~~~t~e~id~~~~~l~~  498 (514)
                       +..+++++++++++|++
T Consensus       369 -~~~~~~~l~~~~~rl~~  385 (386)
T PRK09082        369 -FAKQEETLDAAAERLCQ  385 (386)
T ss_pred             -ecCCHHHHHHHHHHHhh
Confidence             56789999999998864

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.83  E-value=7.1e-18  Score=175.30  Aligned_cols=350  Identities=13%  Similarity=0.083  Sum_probs=205.6

Q ss_pred             EeCCCCEEEEccCCcccccCCC--CCHHHHHHHHHHHhcCC--ccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeC
Q 010250           95 YDVNGKKYLDSLAGLWCTALGG--SEPRLVAAATAQLNTLP--FYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTN  169 (514)
Q Consensus        95 ~d~dG~~ylD~~s~~~~~~lGh--~~p~v~~A~~~~l~~~~--~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~  169 (514)
                      -..+|+..|++.-|.. ..+|+  .+|.+.+++.+.++...  .|... .+..+....+++.+....+ ....++|++++
T Consensus        27 ~~~~~~~~i~l~~G~p-~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~-~G~~~lr~aia~~~~~~~g~~~~~~~I~it~  104 (409)
T PLN00143         27 NEDDHRLAISFGFGDP-SCFECFRTTNIAEDAIVEAVRSAKFNSYAPT-GGILPARRAIADYLSNDLPYQLSPDDVYLTL  104 (409)
T ss_pred             ccCCCCceeeCCCCCC-CCCCCCCCCHHHHHHHHHHHhCcCCCCCCCC-CCCHHHHHHHHHHHHhhcCCCCCHhhEEEec
Confidence            3456888999987743 22232  67888899988887532  12111 2233334444444433321 23557899999


Q ss_pred             ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCCCC
Q 010250          170 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHPGE  247 (514)
Q Consensus       170 sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  247 (514)
                      ++++|+..+++...        ..++.|++.+++|.+........+....             .++.  .+.|+      
T Consensus       105 G~~~al~~~~~~l~--------~~gd~v~v~~P~y~~~~~~~~~~g~~~~-------------~~~~~~~~~~~------  157 (409)
T PLN00143        105 GCKHAAEIIIKVLA--------RPEANILLPRPGFPDVETYAIFHHLEIR-------------HFDLLPEKGWE------  157 (409)
T ss_pred             ChHHHHHHHHHHHc--------CCCCEEEEcCCCCcCHHHHHHHcCCEEE-------------EEeccCCCCCc------
Confidence            99999999988663        3357899999999876433222111100             0000  00011      


Q ss_pred             ChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-ee
Q 010250          248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC  326 (514)
Q Consensus       248 ~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~  326 (514)
                             .++++|++++.   ++..+.+++.|. +.+|.+. +.+.+++|.++|++||+++|+||+|..|-..+..+ ..
T Consensus       158 -------~d~~~l~~~~~---~~~~~~~~~nP~-NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~  225 (409)
T PLN00143        158 -------VDLDAVEAIAD---ENTIAMVIINPG-NPCGSVY-SYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPM  225 (409)
T ss_pred             -------CCHHHHHHhcc---cCCEEEEEECCC-CCCCCcc-CHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcch
Confidence                   11466766553   345677888884 5556554 67889999999999999999999999874444321 11


Q ss_pred             cccCCCCchh---chhhhhcCCcccceeEEeC-H-HHH------HHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250          327 DKYSIKPDLV---SFAKALSSAYMPIGAILVS-P-EVS------EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY  395 (514)
Q Consensus       327 ~~~gv~pDiv---~~sK~l~gG~~pig~v~~~-~-~i~------~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~  395 (514)
                      ..+.-.+.++   +|||.++..++++|+++++ + .+.      +.+..       ......+ .+.+++.++.++|+.-
T Consensus       226 ~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~-------~~~~~~~-~~~~~q~a~~~~l~~~  297 (409)
T PLN00143        226 GLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKK-------ALNPAPF-PPTFIQAAIPEILEKT  297 (409)
T ss_pred             hhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHH-------HHhccCC-CCchHHHHHHHHHhcC
Confidence            1121112232   6899855544999999983 3 332      22221       1111222 3566777777666521


Q ss_pred             -h--hccHHHHHHHHHHHHHhhhhhccCCCcee--EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHH-HHHHHCCcEE
Q 010250          396 -K--ERNIVEQVNKIAPKFQDGVKAFSDSPIIG--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFG-AQCEKHGMLV  469 (514)
Q Consensus       396 -~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~Gv~~  469 (514)
                       .  -++..+.+++..+.+.+.|+++   +...  ....-|.++++++.......      ......+. ..+.++||.+
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~L~~~---~~~~~~~~p~gg~f~w~~l~~~~~~~------~~~~~~~~~~ll~~~gV~v  368 (409)
T PLN00143        298 TEDFFSKTINILRAALAFCYDKLKEI---PCIMCPQKAEGAFFALVKLNLLLLED------IEDDMEFCLKLAKEESLII  368 (409)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHhcC---CCCCCCCCCCeeEEEEEecchhhcCC------CCCHHHHHHHHHHhCCEEE
Confidence             1  0223555666666666666554   2211  11223677888875321000      00022343 4557899999


Q ss_pred             EeeC-----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          470 RVSG-----DNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       470 ~~~g-----~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      .++.     +++||+  +..+++++++++++|.+++++..
T Consensus       369 ~pg~~f~~~~~iRi~--~~~~~~~l~~al~rl~~~l~~~~  406 (409)
T PLN00143        369 LPGVTVGLKNWLRIT--FAVEQSSLEDGLGRLKSFCGRHA  406 (409)
T ss_pred             eCccccCCCCeEEEE--EcCCHHHHHHHHHHHHHHHHHhc
Confidence            9753     579999  66789999999999999886543

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.83  E-value=4.1e-18  Score=176.97  Aligned_cols=321  Identities=15%  Similarity=0.118  Sum_probs=192.2

Q ss_pred             CHHHHHHHHHHH-hcCCc---cccccccCCchHHHHHH----HHHHhcCcCCCCeEE-EeCChhHHHHHHHHHHHHHHhh
Q 010250          118 EPRLVAAATAQL-NTLPF---YHSFWNRTTKPSLDLAK----ELLEMFTASKMAKVF-FTNSGSEANDTQVKLVWYYNNA  188 (514)
Q Consensus       118 ~p~v~~A~~~~l-~~~~~---~~~~~~~~~~~~~ela~----~L~~~~~~~~~~~v~-~~~sGseA~~~Alk~a~~~~~~  188 (514)
                      ||++++|+...+ .++..   +++.+++ ++...+|++    +++++++   .+.++ +++||+.|+.+++....     
T Consensus        41 ~p~v~~a~~~~~~~~~~~g~~gsr~~~G-~~~~~~lE~~~~~~la~l~g---~~~alv~~~SG~~A~~~~l~al~-----  111 (416)
T PRK13034         41 SPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEFVDEVEALAIERAKQLFG---CDYANVQPHSGSQANGAVYLALL-----  111 (416)
T ss_pred             CHHHHHHhcchhhcCCCCCCCCCcccCC-ChHHHHHHHHHHHHHHHHhC---CCceEEecCCcHHHHHHHHHHhc-----
Confidence            899999999985 65433   3445555 577888988    9999883   34674 56999999999997663     


Q ss_pred             cCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC
Q 010250          189 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG  268 (514)
Q Consensus       189 ~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~  268 (514)
                         ..+++|++.+.+|.+....+...+.......        ....+..        .    .....+++++++++... 
T Consensus       112 ---~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~~~--------~----~~~~~d~~~le~~l~~~-  167 (416)
T PRK13034        112 ---KPGDTILGMSLSHGGHLTHGAKVSLSGKWYN--------AVQYGVD--------R----LTGLIDYDEVEELAKEH-  167 (416)
T ss_pred             ---CCCCEEEEcCccceeeeecCCcceeccceee--------eEEcccc--------c----ccCCcCHHHHHHHHhhc-
Confidence               3446777766655442221111110000000        0000000        0    00012357788777542 


Q ss_pred             CCcEEEEEE-ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCC
Q 010250          269 PETIAAFIA-EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSA  345 (514)
Q Consensus       269 ~~~~aaviv-Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG  345 (514)
                        +..+|++ ++++|.   ..+    +++|.++|++||++||+|++|+ +|-.+........+ ..|++  +++|+|+|+
T Consensus       168 --~~klVi~~~~~~g~---~~d----l~~l~~la~~~g~~livD~Aha-~G~~~~g~~~~~~~-~~Di~~~s~~K~l~g~  236 (416)
T PRK13034        168 --KPKLIIAGFSAYPR---ELD----FARFREIADEVGALLMVDMAHI-AGLVAAGEHPNPFP-HAHVVTTTTHKTLRGP  236 (416)
T ss_pred             --CCeEEEECCCcccc---ccC----HHHHHHHHHHcCCEEEEeCccc-ccCcccCCCCCCCC-CceEEEEeCcccCCCC
Confidence              3456676 566553   334    8899999999999999999997 66655322111111 36766  467999764


Q ss_pred             cccceeEEeCHH-HHHHhhhccCCCCcccccCCCCCcH-HHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhhhhhccCC
Q 010250          346 YMPIGAILVSPE-VSEVIHSQSNTLGSFSHGFTYSGHP-VSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVKAFSDS  421 (514)
Q Consensus       346 ~~pig~v~~~~~-i~~~l~~~~~~~~~~~~~~t~~~~p-l~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~  421 (514)
                        .-|+++++++ +.+.+..      ...++.+-+..| ..++++++.++.++.  .++.+++.++.++|++.|+++ +.
T Consensus       237 --~GG~v~~~~~~~~~~~~~------~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~  307 (416)
T PRK13034        237 --RGGMILTNDEEIAKKINS------AVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GY  307 (416)
T ss_pred             --CCeEEEECcHHHHHHHHh------hcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence              2366667654 4444432      111221112223 333344444555432  245789999999999999876 33


Q ss_pred             CceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe-----------eCCEEEEeCCC----CCCH
Q 010250          422 PIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV-----------SGDNIMMSPPF----IMSP  486 (514)
Q Consensus       422 ~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~-----------~g~~iRi~p~~----~~t~  486 (514)
                      ++... .....+..+.+.+...          ....+.+.|.+.||++..           ....||++++.    .+++
T Consensus       308 ~~~~~-~~~t~i~~v~~~~~~~----------~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~  376 (416)
T PRK13034        308 DLVSG-GTDNHLLLVDLRPKGL----------SGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGE  376 (416)
T ss_pred             EeccC-CCCCcEEEEEcCCCCC----------CHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCH
Confidence            33211 1244556666654321          133455788889999974           12469999888    7789


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010250          487 EEVDELISKYGKALKA  502 (514)
Q Consensus       487 e~id~~~~~l~~~l~~  502 (514)
                      +||+++++.|.+++..
T Consensus       377 ~di~~l~~~l~~~~~~  392 (416)
T PRK13034        377 AEFREIANWILDVLDD  392 (416)
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999999999988863

>PRK07568 aspartate aminotransferase; Provisional

Probab=99.83  E-value=6.2e-18  Score=175.32  Aligned_cols=336  Identities=16%  Similarity=0.194  Sum_probs=199.7

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC----cCCCCeEEEeCChhHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT----ASKMAKVFFTNSGSEA  174 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~----~~~~~~v~~~~sGseA  174 (514)
                      |..++||.+|..  .++ .++.+.+++.+.......|.     +.....++.+.+++++.    +.+.++++++++|++|
T Consensus        29 ~~~~i~l~~~~~--~~~-~~~~~~~a~~~~~~~~~~Y~-----~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~a  100 (397)
T PRK07568         29 GIKVYHLNIGQP--DIK-TPEVFFEAIKNYDEEVLAYS-----HSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEA  100 (397)
T ss_pred             CCCEEEecCCCC--CCC-CCHHHHHHHHHHhcCCcCcC-----CCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHH
Confidence            345778766632  233 36778888876654322221     12223455555555542    2356789999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      +..++...+        ..+++|++.++.|........ ..|...            ..++....          +.+..
T Consensus       101 l~~~~~~l~--------~~gd~Vl~~~p~y~~~~~~~~-~~g~~~------------~~v~~~~~----------~g~~~  149 (397)
T PRK07568        101 ILFAMMAIC--------DPGDEILVPEPFYANYNGFAT-SAGVKI------------VPVTTKIE----------EGFHL  149 (397)
T ss_pred             HHHHHHHhc--------CCCCEEEEecCCCccHHHHHH-HcCCEE------------EEeecCcc----------cCCCC
Confidence            999887653        234678888888876432111 111110            00111000          00000


Q ss_pred             HHHHHHHHHHHHhCCCcEEEE-EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-ee-cccCC
Q 010250          255 RLANNLEDLILKEGPETIAAF-IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC-DKYSI  331 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aav-ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~-~~~gv  331 (514)
                      .+.+++++.+.    .++.+| ++.| ++.+|.+. +.+.+++|.++|+++|+++|+||++.+|...+... .. ...+.
T Consensus       150 ~~~~~l~~~~~----~~~~~v~i~~p-~NPtG~~~-~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~  223 (397)
T PRK07568        150 PSKEEIEKLIT----PKTKAILISNP-GNPTGVVY-TKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGL  223 (397)
T ss_pred             CCHHHHHHhcC----ccceEEEEECC-CCCCCccC-CHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCC
Confidence            01355666553    234444 4555 55567544 56779999999999999999999999886555321 11 11222


Q ss_pred             CCchh---chhhhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccHHHHHH
Q 010250          332 KPDLV---SFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVN  405 (514)
Q Consensus       332 ~pDiv---~~sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~~~~~~  405 (514)
                      .+.++   +|||.++..++++|+++++ +++++.+...       .. .+++.+.+.+.++.++|+..+  -+++.+.++
T Consensus       224 ~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~-------~~-~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~  295 (397)
T PRK07568        224 EDRVIIIDSVSKRYSACGARIGCLISKNKELIAAAMKL-------CQ-ARLSPPTLEQIGAAALLDTPESYFDEVREEYK  295 (397)
T ss_pred             cCCEEEEecchhhccCCCcceEEEecCCHHHHHHHHHH-------hh-ccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHH
Confidence            33343   6899988533899999984 7788776531       11 235566777777776665211  123456677


Q ss_pred             HHHHHHHhhhhhccCCCceeEEEeee-eeEEEEEccCCCCCCCCCCccchHHHHHHHHHH------CCcEEEee------
Q 010250          406 KIAPKFQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK------HGMLVRVS------  472 (514)
Q Consensus       406 ~~~~~l~~~L~~l~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~Gv~~~~~------  472 (514)
                      ++.+.+.+.|+++   +.+......| .++++.+....            ...+...|.+      +||.+.++      
T Consensus       296 ~~~~~l~~~L~~~---~~~~~~~p~g~~~~~~~l~~~~------------~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~  360 (397)
T PRK07568        296 KRRDILYEELNKI---PGVVCEKPKGAFYIIAKLPVDD------------AEDFAKWLLTDFNYNGETVMVAPASGFYAT  360 (397)
T ss_pred             HHHHHHHHHHhcC---CCceecCCCcceEEEEecCCCC------------HHHHHHHHHhhcccccceEEEeCchHhcCC
Confidence            7777788877664   2222223334 45566664311            3346666654      58998863      


Q ss_pred             ----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          473 ----GDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       473 ----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                          .+.||++  +..+++++++++++|.+++++..
T Consensus       361 ~~~~~~~iRls--~~~~~~~~~~~~~~l~~~l~~~~  394 (397)
T PRK07568        361 PGLGKNEIRIA--YVLNEEDLKRAMEILKEALEKYN  394 (397)
T ss_pred             CCCCCCeEEEE--EeCCHHHHHHHHHHHHHHHHHhh
Confidence                1469999  56789999999999999887644

>PRK08175 aminotransferase; Validated

Probab=99.83  E-value=6.5e-18  Score=174.98  Aligned_cols=343  Identities=15%  Similarity=0.141  Sum_probs=205.8

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEAN  175 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA~  175 (514)
                      |+.++||.+|   ++.+..+|.+.+++.+.+.... ..+....+..+....+++.+.+.++ ....+ ++++++++++++
T Consensus        28 ~~~~i~l~~g---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l  104 (395)
T PRK08175         28 GEDIIDFSMG---NPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGL  104 (395)
T ss_pred             CCCeEEcCCC---CCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence            5778999877   4555557778888888765321 1111111222333344444443322 12334 699999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      ..++....        ..+++|++.+++|.......... |...            ..++...      .+    .    
T Consensus       105 ~~~~~~~~--------~~gd~Vlv~~P~y~~~~~~~~~~-g~~~------------~~v~~~~------~~----~----  149 (395)
T PRK08175        105 AHLMLATL--------DHGDTVLVPNPSYPIHIYGAVIA-GAQV------------RSVPLVE------GV----D----  149 (395)
T ss_pred             HHHHHHhC--------CCCCEEEEcCCCCcchHHHHHHc-CCeE------------EEEeccc------CC----C----
Confidence            88776553        23468999999997654332221 1111            0111100      00    0    


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-e-ecccCCCC
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-G-CDKYSIKP  333 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~-~~~~gv~p  333 (514)
                      ..+++++++.+..+ +++++++...++.+|.+. +.+.+++|.++|++||+++|+||++..+-..|... . ....+ .+
T Consensus       150 ~~~~l~~~l~~~~~-~~~~v~i~~p~NPtG~~~-~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~-~~  226 (395)
T PRK08175        150 FFNELERAIRESYP-KPKMMILGFPSNPTAQCV-ELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPG-AK  226 (395)
T ss_pred             cHHHHHHHHhhccC-CceEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCC-cc
Confidence            14677777754332 455666654456667554 66788999999999999999999998763333211 1 11111 12


Q ss_pred             ch----hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHH
Q 010250          334 DL----VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKI  407 (514)
Q Consensus       334 Di----v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~  407 (514)
                      |.    -+|||.++..++++|++++++++++.+...       .....++.+...+.++.++++..++  +.+.+.++++
T Consensus       227 ~~~i~~~S~SK~~g~pGlRiG~~~~~~~l~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~  299 (395)
T PRK08175        227 DVAVEFFTLSKSYNMAGWRIGFMVGNPELVSALARI-------KSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRR  299 (395)
T ss_pred             cCEEEEeeccccccCcchhheeeeCCHHHHHHHHHH-------HhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence            32    368999865448999999999999888642       1112344455566666666642111  2345666677


Q ss_pred             HHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEEe
Q 010250          408 APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMMS  479 (514)
Q Consensus       408 ~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi~  479 (514)
                      .+.+.+.|+.+   ++.......|.++++++.+.....        -...++..++ +.||.+.++       .+.+||+
T Consensus       300 ~~~~~~~L~~~---~~~~~~p~~g~~i~i~l~~~~~~~--------~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis  368 (395)
T PRK08175        300 RDVLVKGLHEA---GWMVEMPKASMYVWAKIPEPYAAM--------GSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFA  368 (395)
T ss_pred             HHHHHHHHHHc---CCcccCCCEEEEEEEECCcccCCC--------CHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEE
Confidence            77787877765   221112235778888886432100        1345666665 689999875       2469999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                        +..+++.+.+++++|.+++.+
T Consensus       369 --~~~~~~~~~~al~~l~~~l~~  389 (395)
T PRK08175        369 --LIENRDRIRQAIRGIKAMFRA  389 (395)
T ss_pred             --eCCCHHHHHHHHHHHHHHHHh
Confidence              456889999999999988863

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=99.83  E-value=3.1e-18  Score=174.91  Aligned_cols=321  Identities=18%  Similarity=0.185  Sum_probs=197.5

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccE
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK  196 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~  196 (514)
                      .++++.+|+.+.+..    +. +....+...++.+.++++++....+.+++++||++|+..++....        ..++.
T Consensus        10 ~~~~v~~a~~~~~~~----~~-~~~~~~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~--------~~g~~   76 (356)
T cd06451          10 VPPRVLKAMNRPMLG----HR-SPEFLALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLL--------EPGDK   76 (356)
T ss_pred             CCHHHHHHhCCCccC----CC-CHHHHHHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhC--------CCCCE
Confidence            467777777543321    11 111234466888899998854333468899999999999987553        23467


Q ss_pred             EEEEecCCcccce-eeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250          197 FIARQKSYHGSTL-IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF  275 (514)
Q Consensus       197 ii~~~~~yHG~t~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav  275 (514)
                      |++.+.+|++... ......|...            ..++....+             +.+.+++++.+..   .++++|
T Consensus        77 vl~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~-------------~~~~~~l~~~i~~---~~~~~v  128 (356)
T cd06451          77 VLVGVNGVFGDRWADMAERYGADV------------DVVEKPWGE-------------AVSPEEIAEALEQ---HDIKAV  128 (356)
T ss_pred             EEEecCCchhHHHHHHHHHhCCCe------------EEeecCCCC-------------CCCHHHHHHHHhc---cCCCEE
Confidence            8887776665311 1111112111            111111000             1124677777752   245667


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhch--hhhhcCCcccceeEE
Q 010250          276 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSAYMPIGAIL  353 (514)
Q Consensus       276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG~~pig~v~  353 (514)
                      ++..+++..|.+.+    +++|.++|+++|+++|+|++|. +|..  .+....+  .+|+++.  +|.++++ .++|+++
T Consensus       129 ~i~~~~~~~G~~~~----~~~i~~~a~~~~~~li~D~~~~-~g~~--~~~~~~~--~~d~~~~s~~K~l~~p-~g~G~l~  198 (356)
T cd06451         129 TLTHNETSTGVLNP----LEGIGALAKKHDALLIVDAVSS-LGGE--PFRMDEW--GVDVAYTGSQKALGAP-PGLGPIA  198 (356)
T ss_pred             EEeccCCCcccccC----HHHHHHHHHhcCCEEEEeeehh-ccCc--ccccccc--CccEEEecCchhccCC-CCcceeE
Confidence            66666777898876    9999999999999999999986 6432  2222222  3576644  6999976 4689999


Q ss_pred             eCHHHHHHhhhccCCCCcc---------cc---cCCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhc
Q 010250          354 VSPEVSEVIHSQSNTLGSF---------SH---GFTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAF  418 (514)
Q Consensus       354 ~~~~i~~~l~~~~~~~~~~---------~~---~~t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l  418 (514)
                      .++++++.+.......+.+         ..   ....+.++....++.++++.+.+.   .+.++.+++.+++++.|+++
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~  278 (356)
T cd06451         199 FSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL  278 (356)
T ss_pred             ECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence            9999888775300000000         00   112234455667777888776543   45677888888899988875


Q ss_pred             cCCCceeEEEeee-eeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee-----CCEEEEeCCCCCCHHHHHH
Q 010250          419 SDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS-----GDNIMMSPPFIMSPEEVDE  491 (514)
Q Consensus       419 ~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~-----g~~iRi~p~~~~t~e~id~  491 (514)
                       ...+.....+.+ .+..+.+.+..           ....+++.|.++ ||.+.++     ++.||++|...+|+|||++
T Consensus       279 -g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~  346 (356)
T cd06451         279 -GLKLLAKPELRSPTVTAVLVPEGV-----------DGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLG  346 (356)
T ss_pred             -CCeeccCcccCCCceEEEECCCCC-----------CHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHH
Confidence             222222111112 22233332211           145688899998 9998753     3579999999999999999


Q ss_pred             HHHHHHHHH
Q 010250          492 LISKYGKAL  500 (514)
Q Consensus       492 ~~~~l~~~l  500 (514)
                      ++++|++++
T Consensus       347 ~~~~l~~~~  355 (356)
T cd06451         347 VLSALEEAL  355 (356)
T ss_pred             HHHHHHHHh
Confidence            999999876

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>PRK08068 transaminase; Reviewed

Probab=99.83  E-value=5.7e-18  Score=175.05  Aligned_cols=336  Identities=13%  Similarity=0.090  Sum_probs=197.8

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC--ccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP--FYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSE  173 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~--~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGse  173 (514)
                      .|..+|||..+   ++-...+|.+.+++.+.+....  .|... .+..+....+++.+.+.++ ....+ +++++++|++
T Consensus        30 ~~~~~i~l~~~---~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~-~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~  105 (389)
T PRK08068         30 EGHDVINLGQG---NPDQPTPEHIVEALQEAAENPANHKYSPF-RGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKA  105 (389)
T ss_pred             cCCCeEEecCC---CCCCCCCHHHHHHHHHHHhCCCCCCCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHH
Confidence            34568998777   3444567889999988876421  12111 1223333444444433222 13445 7999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS  253 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (514)
                      ++..++....        ..++.|++.+++|.+........+. ..            ..++....          ..+ 
T Consensus       106 ~l~~~~~~~~--------~~gd~vlv~~P~y~~~~~~~~~~g~-~~------------~~i~~~~~----------~~~-  153 (389)
T PRK08068        106 GLVELPQCLM--------NPGDTILVPDPGYPDYLSGVALARA-QF------------ETMPLIAE----------NNF-  153 (389)
T ss_pred             HHHHHHHHhC--------CCCCEEEEcCCCCcchHHHHHhcCC-EE------------EEeecccc----------cCC-
Confidence            9988876553        2346799999999776433322221 11            00111000          000 


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc-cce-ecccCC
Q 010250          254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MFG-CDKYSI  331 (514)
Q Consensus       254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~-~~~-~~~~gv  331 (514)
                      ..+++++++.+.   .+....+++.| ++.+|.+ .+.+.+++|.++|++||+++|+||+|..|...+. ... ....+.
T Consensus       154 ~~d~~~l~~~~~---~~~~~v~l~~P-~NPTG~~-~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~  228 (389)
T PRK08068        154 LPDYTKIPEEVA---EKAKLMYLNYP-NNPTGAV-ATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGA  228 (389)
T ss_pred             CCCHHHHHHhcc---ccceEEEEECC-CCCCCCc-CCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCc
Confidence            001345555543   22334555557 5666654 4678899999999999999999999987754442 111 122222


Q ss_pred             CCc---hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHH
Q 010250          332 KPD---LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNK  406 (514)
Q Consensus       332 ~pD---iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~  406 (514)
                      .+.   +-+|||.++..++++|++++++++++.+....       .....+..+..+.++.+++..-.+  +.+.+.+++
T Consensus       229 ~~~~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~-------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~  301 (389)
T PRK08068        229 KDVGIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQ-------DHLFVSLFGAIQDAAIEALLSDQSCVAELVARYES  301 (389)
T ss_pred             cCCEEEEecchhccCCccceeEeEecCHHHHHHHHHHH-------hhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence            222   23799998643399999999999998886421       111223334445555555531111  345677777


Q ss_pred             HHHHHHhhhhhccCCCceeEEEeee-eeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-------CCEEE
Q 010250          407 IAPKFQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------GDNIM  477 (514)
Q Consensus       407 ~~~~l~~~L~~l~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-------g~~iR  477 (514)
                      +.+.+.+.|+++ +..   .....| .++++.+.+..           ....+.+.|++ +||.+.++       .+.||
T Consensus       302 ~r~~~~~~L~~~-g~~---~~~~~g~~~~~v~~~~~~-----------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iR  366 (389)
T PRK08068        302 RRNAFISACREI-GWE---VDAPKGSFFAWMPVPKGY-----------TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVR  366 (389)
T ss_pred             HHHHHHHHHHHC-CCc---ccCCCeeEEEEEECCCCC-----------CHHHHHHHHHHhCCEEEecchHhCccCCCeEE
Confidence            888888888765 221   123344 45677775321           13468888886 69999864       24799


Q ss_pred             EeCCCCCCHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~  498 (514)
                      |+  +..+++.+.+++++|.+
T Consensus       367 i~--~~~~~~~l~~al~~l~~  385 (389)
T PRK08068        367 VG--LLTDEERLREAVERIGK  385 (389)
T ss_pred             EE--EcCCHHHHHHHHHHHHH
Confidence            99  55677777777777764

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=99.83  E-value=2.4e-18  Score=175.82  Aligned_cols=322  Identities=15%  Similarity=0.187  Sum_probs=196.9

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT  177 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~  177 (514)
                      +|.+++||..|.  +.++ .+|++.+++.+.+.....|      +.....+|.+.++++++ ...+++++++|+++++..
T Consensus        28 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~Y------~~~~~~~lr~~ia~~~~-~~~~~I~it~G~~~al~~   97 (357)
T PRK14809         28 DPDDLVKLSSNE--NPHG-PSPAAVEAIREAAERVHSY------PKASHADLTAALADRWD-VSPEQVWLANGGDGALDY   97 (357)
T ss_pred             CccceeEecCCC--CCCC-CCHHHHHHHHHHHhhhhcC------CCCCHHHHHHHHHHHhC-CCcceEEECCCHHHHHHH
Confidence            466799998763  4455 5788999998877543222      12234578888888773 466899999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      +++...        ..++.|++.+++|......... .+...            ..++.+..          +.+. .+.
T Consensus        98 ~~~~~~--------~~gd~V~v~~P~y~~~~~~~~~-~g~~~------------~~~~l~~~----------~~~~-~~~  145 (357)
T PRK14809         98 LARAML--------DPGDTVLVPDPGFAYYGMSARY-HHGEV------------REYPVSKA----------DDFE-QTA  145 (357)
T ss_pred             HHHHhc--------CCCCEEEEeCCChHHHHHHHHH-cCCeE------------EEEecccC----------cCCC-cCH
Confidence            887653        3346899999998644321111 11110            00111000          0000 012


Q ss_pred             HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecccCCCCchh
Q 010250          258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPDLV  336 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~~gv~pDiv  336 (514)
                      +++++..    ++ +.++++...++.+|.+. +.+.+++|.++|++ ++++|+||+|..|...+.... .+..+-..-+-
T Consensus       146 ~~~~~~~----~~-~k~i~l~~p~NPTG~~~-s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~  218 (357)
T PRK14809        146 DTVLDAY----DG-ERIVYLTSPHNPTGSEI-PLDEVEALAERTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLR  218 (357)
T ss_pred             HHHHHhh----cC-CcEEEEeCCCCCCCcCC-CHHHHHHHHHhCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEe
Confidence            3333322    12 33444445566677665 44567777777764 789999999998754332111 11111111133


Q ss_pred             chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhhh
Q 010250          337 SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDGV  415 (514)
Q Consensus       337 ~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L  415 (514)
                      +|||.++..++++|++++++++++.+...         ..+++.+++++.++.++|+.-+ -++..+.++++.+.+.+.|
T Consensus       219 SfSK~~~~~GlRiG~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L  289 (357)
T PRK14809        219 TFSKAYGLAGLRLGYAVVPEEWADAYARV---------NTPFAASELACRAGLAALDDDEHVERTVETARWAREYIREEL  289 (357)
T ss_pred             cchhHhcCcchhheeeecCHHHHHHHHHh---------CCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            78999874238999999999999888741         1356678888888887774210 0123444555555555555


Q ss_pred             hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-----CEEEEeCCCCCCHHHHH
Q 010250          416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMSPEEVD  490 (514)
Q Consensus       416 ~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-----~~iRi~p~~~~t~e~id  490 (514)
                      ...   .    ....|.++++.+.+              ...+.+.|.++||.+.++.     +.||++  + .++++++
T Consensus       290 ~~~---~----~~~~g~f~~~~~~~--------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRls--~-~~~~~~~  345 (357)
T PRK14809        290 DAP---T----WESAGNFVLAEVGD--------------ASAVAEAAQERGVIVRDCTSFGLPECIRIT--C-GTREETE  345 (357)
T ss_pred             cCc---c----CCCCCCEEEEECCC--------------HHHHHHHHHHCCEEEEECccCCCCCeEEEe--c-CCHHHHH
Confidence            432   1    13457777776631              2357788899999999753     579999  3 4689999


Q ss_pred             HHHHHHHHHHH
Q 010250          491 ELISKYGKALK  501 (514)
Q Consensus       491 ~~~~~l~~~l~  501 (514)
                      +++++|+++++
T Consensus       346 ~~l~~L~~~l~  356 (357)
T PRK14809        346 RAVEVLNEVLA  356 (357)
T ss_pred             HHHHHHHHHhc
Confidence            99999988764

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=99.83  E-value=3.9e-18  Score=182.29  Aligned_cols=342  Identities=14%  Similarity=0.181  Sum_probs=204.9

Q ss_pred             CCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----C-cCCCCeEEEeCC
Q 010250           97 VNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----T-ASKMAKVFFTNS  170 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~-~~~~~~v~~~~s  170 (514)
                      ..|+.+|||..|.. +++|. .++++++++.+++.....|..     .....+|.+.|++++    . ....++|+++++
T Consensus       143 ~~g~~~i~l~~G~p-~~~~~~~p~~~~~~~~~~~~~~~~Y~~-----~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G  216 (517)
T PRK13355        143 AAGTHILKLNIGNP-APFGFRTPDEVVYDMAQQLTDTEGYSD-----SKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNG  216 (517)
T ss_pred             HcCCCeEEecCcCC-CcCCCCCCHHHHHHHHHHhhcCCCCCC-----CcChHHHHHHHHHHHHhcCCCCCChhHEEEeCc
Confidence            35788999988744 45675 478899999888765333321     122344555555544    1 235679999999


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCC
Q 010250          171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGET  248 (514)
Q Consensus       171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  248 (514)
                      ++|++..+++...        ..++.|++.+++|..+.......++....             +++.  ..|.       
T Consensus       217 ~~eal~~~~~~l~--------~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~-------------~~~~~~~~~~-------  268 (517)
T PRK13355        217 VSELINLSMSALL--------DDGDEVLIPSPDYPLWTACVNLAGGTAVH-------------YRCDEQSEWY-------  268 (517)
T ss_pred             HHHHHHHHHHHhC--------CCCCEEEEcCCCCcCHHHHHHHCCCEEEE-------------eecCcccCCC-------
Confidence            9999999987653        33578999999998876444333322111             1110  0111       


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecc
Q 010250          249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK  328 (514)
Q Consensus       249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~  328 (514)
                            .+++++++.+.   ++..+.+++.| ++.+|.+. +++.+++|.++|++||+++|+||+|..|-..|..+. ..
T Consensus       269 ------~d~~~l~~~~~---~~~k~i~i~nP-~NPTG~v~-~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~-s~  336 (517)
T PRK13355        269 ------PDIDDIRSKIT---SRTKAIVIINP-NNPTGALY-PREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHT-SI  336 (517)
T ss_pred             ------CCHHHHHHhcC---cCceEEEEECC-CCCCCcCc-CHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcc-cH
Confidence                  11466666553   34456667777 55556554 578999999999999999999999987744442111 11


Q ss_pred             cCCCCch--h---chhhhhcCCcccceeEEe--CHHH----HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh
Q 010250          329 YSIKPDL--V---SFAKALSSAYMPIGAILV--SPEV----SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE  397 (514)
Q Consensus       329 ~gv~pDi--v---~~sK~l~gG~~pig~v~~--~~~i----~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~  397 (514)
                      ....+|.  +   +|||.++-.++++|++++  ++++    ++.+..        .....++.+.+++.++.++|+....
T Consensus       337 ~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~q~a~~~aL~~~~~  408 (517)
T PRK13355        337 ASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNM--------LANMRLCSNVPAQSIVQTALGGHQS  408 (517)
T ss_pred             HHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHH--------HhcCcCCcChHHHHHHHHHhcCCcc
Confidence            1123443  2   479976543399999985  3543    333321        0112244566777777777742100


Q ss_pred             -ccHH---HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeE-EEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee
Q 010250          398 -RNIV---EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLIL-GTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS  472 (514)
Q Consensus       398 -~~~~---~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~  472 (514)
                       ++..   .+..+..+++.+.|+++   +.+......|.++ ++.+......   ...   ....+...|.++||++.++
T Consensus       409 ~~~~~~~~~~~~~~r~~l~~~L~~~---~g~~~~~p~g~fy~~~~l~~~~~~---~~~---~~~~~~~ll~~~gV~v~pg  479 (517)
T PRK13355        409 VKDYLVPGGRVYEQRELVYNALNAI---PGISAVKPKAAFYIFPKIDVKKFN---IHD---DEQFALDLLHDKKVLIVQG  479 (517)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC---CCcccCCCCeeeEEEeecCcccCC---CCC---HHHHHHHHHHhCCEEEeCc
Confidence             1111   23344456666766654   2233334455554 4455431100   000   1233445677899999864


Q ss_pred             -------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          473 -------GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       473 -------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                             .+.+|++  +..++++|++++++|.++++..
T Consensus       480 ~~F~~~~~~~~Ris--~~~~~~~l~~a~~rl~~~~~~~  515 (517)
T PRK13355        480 TGFNWDKPDHFRVV--YLPRLEDLEDAMDRLADFFSYY  515 (517)
T ss_pred             chhCCCCcCEEEEE--eCCCHHHHHHHHHHHHHHHHHh
Confidence                   2469999  6789999999999999998654

>PRK12414 putative aminotransferase; Provisional

Probab=99.83  E-value=5.6e-18  Score=174.74  Aligned_cols=337  Identities=13%  Similarity=0.082  Sum_probs=203.2

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC-C-CCeEEEeCChhHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS-K-MAKVFFTNSGSEANDT  177 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~-~-~~~v~~~~sGseA~~~  177 (514)
                      +.+|||..|..  .++ .+|.+.+++.+.+......+....+..+....+++++.+.++.. . .+++++++||++|+..
T Consensus        29 ~~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~  105 (384)
T PRK12414         29 HDALNLSQGAP--NFA-PDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYA  105 (384)
T ss_pred             CCeEEcCCCCC--CCC-CCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHH
Confidence            45788887753  344 47889999888775421111111223455566777776665421 2 2579999999999998


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      +++...        .++++|++.+++|.+........+.. .            ..++...           +.+ ..++
T Consensus       106 ~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~g~~-~------------~~v~~~~-----------~~~-~~d~  152 (384)
T PRK12414        106 AISALV--------HPGDEVIYFEPSFDSYAPIVRLQGAT-P------------VAIKLSP-----------EDF-RVNW  152 (384)
T ss_pred             HHHHhc--------CCCCEEEEeCCCccchHHHHHHcCCE-E------------EEEecCc-----------ccc-ccCH
Confidence            887653        34578999999997653322221111 0            0011100           000 1124


Q ss_pred             HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-ee-cccCCCCch
Q 010250          258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC-DKYSIKPDL  335 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~-~~~gv~pDi  335 (514)
                      ++|++.+.    +++.+|++...++.+|.+. +++.+++|.++|++||+++|+||+|..|...|... .. .+.+....+
T Consensus       153 ~~l~~~l~----~~~~~v~i~~p~NPTG~~~-s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~  227 (384)
T PRK12414        153 DEVAAAIT----PRTRMIIVNTPHNPSATVF-SAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERS  227 (384)
T ss_pred             HHHHhhcC----cccEEEEEcCCCCCCCcCC-CHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcE
Confidence            56666553    2345555555566677654 56789999999999999999999998663333211 11 111222222


Q ss_pred             h---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH-hhccHHHHHHHHHHHH
Q 010250          336 V---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY-KERNIVEQVNKIAPKF  411 (514)
Q Consensus       336 v---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~-~~~~~~~~~~~~~~~l  411 (514)
                      +   +|||.++..++++|++++++++++.+...       ....+++.+.+++.++.+.|+.- ...++.+.++++.+.+
T Consensus       228 i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~-------~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l  300 (384)
T PRK12414        228 VIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKV-------HQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLL  300 (384)
T ss_pred             EEEecccccccCccceEEEEecCHHHHHHHHHH-------HhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHH
Confidence            2   68998863339999999999998887641       12235666777777777666421 1113456677778888


Q ss_pred             HhhhhhccCCCceeEEEeee-eeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------CCEEEEeCC
Q 010250          412 QDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---------GDNIMMSPP  481 (514)
Q Consensus       412 ~~~L~~l~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------g~~iRi~p~  481 (514)
                      .+.|++.   + .......| .++++.+......        ...+.+...|.++||.+.++         .+.||++  
T Consensus       301 ~~~L~~~---g-~~~~~~~gg~~~~~~~~~~~~~--------~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis--  366 (384)
T PRK12414        301 ARELAGS---R-FELLPSEGSFFMLARFRHFSDE--------SDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLS--  366 (384)
T ss_pred             HHHHHhC---C-CeecCCCcceEEEEcccccCCC--------CHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEE--
Confidence            8887764   2 11222334 4555566431100        01223335667889999874         1469999  


Q ss_pred             CCCCHHHHHHHHHHHHH
Q 010250          482 FIMSPEEVDELISKYGK  498 (514)
Q Consensus       482 ~~~t~e~id~~~~~l~~  498 (514)
                      +..+++++++++++|.+
T Consensus       367 ~~~~~~~~~~~~~rl~~  383 (384)
T PRK12414        367 FSKDDATLVEGARRLCS  383 (384)
T ss_pred             ecCCHHHHHHHHHHHhh
Confidence            56689999999998864

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=99.82  E-value=7.2e-18  Score=171.95  Aligned_cols=321  Identities=17%  Similarity=0.188  Sum_probs=203.1

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV  179 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al  179 (514)
                      ..++||..|.  +.+|. +|.+.+++.+.+..+..|      +.....+|.+.+++++. .+.+++++++++++++..++
T Consensus        19 ~~~~~l~~~~--~~~~~-p~~~~~a~~~~~~~~~~Y------~~~~~~~lr~~ia~~~~-~~~~~i~it~Ga~~~l~~~~   88 (354)
T PRK06358         19 NMILDFSANI--NPLGV-PESLKQAITENLDKLVEY------PDPDYLELRKRIASFEQ-LDLENVILGNGATELIFNIV   88 (354)
T ss_pred             cceEEecCCC--CCCCC-CHHHHHHHHHHHHhhhcC------CCccHHHHHHHHHHHhC-CChhhEEECCCHHHHHHHHH
Confidence            4579997654  45664 789999998877543322      22224678888888873 46789999999999999888


Q ss_pred             HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250          180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN  259 (514)
Q Consensus       180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (514)
                      +..         .+ +.|++.+++|+......... |....            .++....          +.+. .+ ++
T Consensus        89 ~~~---------~~-~~v~i~~P~y~~~~~~~~~~-g~~~~------------~~~~~~~----------~~~~-~d-~~  133 (354)
T PRK06358         89 KVT---------KP-KKVLILAPTFAEYERALKAF-DAEIE------------YAELTEE----------TNFA-AN-EI  133 (354)
T ss_pred             HHh---------CC-CcEEEecCChHHHHHHHHHc-CCeeE------------EEeCccc----------cCCC-cc-HH
Confidence            754         12 47999999998765333221 11110            0111000          0000 00 12


Q ss_pred             HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecccCCCCchh--
Q 010250          260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPDLV--  336 (514)
Q Consensus       260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~~gv~pDiv--  336 (514)
                      +.+.+.   .+....+++.| ++.+|.+ .+.+.+++|.++|++||+++|+||+|..|-..+.... .......+.++  
T Consensus       134 ~~~~~~---~~~~~v~~~~P-~NPtG~~-~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~  208 (354)
T PRK06358        134 VLEEIK---EEIDLVFLCNP-NNPTGQL-ISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIII  208 (354)
T ss_pred             HHHhhc---cCCCEEEEeCC-CCCCCCc-cCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEE
Confidence            222222   22334457777 5555654 4678899999999999999999999987744332111 11112123333  


Q ss_pred             -chhhhhc-CCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHH
Q 010250          337 -SFAKALS-SAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQ  412 (514)
Q Consensus       337 -~~sK~l~-gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~  412 (514)
                       +|||.++ .| +++|+++++ +.+++.+...       .  ..++.+.++..++.++|+.-+. ++..+.++++.+.+.
T Consensus       209 ~S~SK~~gl~G-~RiG~lv~~~~~~~~~~~~~-------~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~  278 (354)
T PRK06358        209 RAFTKFFAIPG-LRLGYGLTSNKNLAEKLLQM-------R--EPWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLY  278 (354)
T ss_pred             EechhhccCcc-hhheeeecCCHHHHHHHHHh-------C--CCCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence             6899887 45 999999984 6787777631       1  2456677777777777742111 234556677777777


Q ss_pred             hhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----C---CEEEEeCCCCCC
Q 010250          413 DGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----G---DNIMMSPPFIMS  485 (514)
Q Consensus       413 ~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----g---~~iRi~p~~~~t  485 (514)
                      +.|+++   +.+....+.|.++.+.+.+              ...+.+.|.++||.+.++    +   +.||++   ..+
T Consensus       279 ~~L~~~---~~~~~~~~~g~f~~~~~~~--------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls---~~~  338 (354)
T PRK06358        279 NGLSEF---KGIKVYKPSVNFIFFKLEK--------------PIDLRKELLKKGILIRSCSNYRGLDENYYRVA---VKS  338 (354)
T ss_pred             HHHhcC---CCcEEcCCcceEEEEEcCc--------------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE---eCC
Confidence            777664   2222234456677776642              135778899999999974    1   469999   678


Q ss_pred             HHHHHHHHHHHHHHH
Q 010250          486 PEEVDELISKYGKAL  500 (514)
Q Consensus       486 ~e~id~~~~~l~~~l  500 (514)
                      +++.++++++|++.+
T Consensus       339 ~~~~~~l~~~l~~~~  353 (354)
T PRK06358        339 REDNKKLLKALEVIL  353 (354)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            899999999998764

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.82  E-value=9e-18  Score=175.35  Aligned_cols=343  Identities=14%  Similarity=0.121  Sum_probs=201.9

Q ss_pred             CCEEEEccCCcccccCC-C-CCHHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcC-----cCCCCeEEEeCC
Q 010250           99 GKKYLDSLAGLWCTALG-G-SEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFT-----ASKMAKVFFTNS  170 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lG-h-~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~-----~~~~~~v~~~~s  170 (514)
                      |+.+|++..|... .++ . .+|++.+++.++++.... .++    +.....++.+.+++++.     ....++|++++|
T Consensus        51 ~~~~i~l~~G~P~-~~~~~~~~~~~~~a~~~al~~~~~~~Y~----~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G  125 (430)
T PLN00145         51 PRPVLPLGHGDPS-AFPCFRTAPEAEDAVAAALRSGKYNSYS----TCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAG  125 (430)
T ss_pred             CCCeeeCCCCCCC-CCCCCCCCHHHHHHHHHHHHcCcCCCCC----CCccCHHHHHHHHHHHhhccCCCCChhhEEEeCC
Confidence            7889998877432 222 2 467899999988865321 111    11223455555555542     124578999999


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCC
Q 010250          171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGET  248 (514)
Q Consensus       171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  248 (514)
                      +++|+..+++...        .+++.|++.+++|..+.......+....             .++.+  ..|.       
T Consensus       126 ~~~al~l~~~~l~--------~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~-------------~~~~~~~~~~~-------  177 (430)
T PLN00145        126 CAQAIEIIMSVLA--------QPGANILLPRPGYPLYEARAVFSGLEVR-------------HFDLLPERGWE-------  177 (430)
T ss_pred             HHHHHHHHHHHhc--------CCCCEEEEcCCCCccHHHHHHHcCCEEE-------------EeeCCcccCCc-------
Confidence            9999999988763        3356899999999875433222111111             11110  0111       


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eec
Q 010250          249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCD  327 (514)
Q Consensus       249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~  327 (514)
                            .+++++++++.   ++..+++++.|. +.+|.+ .+.+.+++|.++|++||+++|+||+|..|...+..+ ...
T Consensus       178 ------~d~~~l~~~~~---~~~~~i~i~~P~-NPtG~v-~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~  246 (430)
T PLN00145        178 ------VDLEGVEALAD---ENTVAMVIINPN-NPCGSV-YSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMG  246 (430)
T ss_pred             ------CCHHHHHHHhC---cCceEEEEeCCC-CCCCCC-CCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchh
Confidence                  12467777664   345677777775 556654 466889999999999999999999998774333221 111


Q ss_pred             ccCCCCchh---chhhhhcCCcccceeEEe--CHHHHH------HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh
Q 010250          328 KYSIKPDLV---SFAKALSSAYMPIGAILV--SPEVSE------VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK  396 (514)
Q Consensus       328 ~~gv~pDiv---~~sK~l~gG~~pig~v~~--~~~i~~------~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~  396 (514)
                      .++-...++   +|||.++..++++|++++  ++.+++      .+..       +. ..+.+.+.+.+.++..+|+.-.
T Consensus       247 ~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~Q~a~~~~l~~~~  318 (430)
T PLN00145        247 VFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRN-------YL-NISTDPATFVQGAIPQIIANTK  318 (430)
T ss_pred             hhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHH-------Hh-cccCCCCHHHHHHHHHHHhcCH
Confidence            111112233   589985544499999987  333332      2321       11 1122345667777766665311


Q ss_pred             h---ccHHHHHHHHHHHHHhhhhhccCCCceeE-EEee-eeeEEEEEccCCCCCCCCCCccchHHHHHH-HHHHCCcEEE
Q 010250          397 E---RNIVEQVNKIAPKFQDGVKAFSDSPIIGE-IRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGA-QCEKHGMLVR  470 (514)
Q Consensus       397 ~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~-v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~Gv~~~  470 (514)
                      +   ++..+.++++.+.+.+.|+++   +.+.. .... |+++.+.++......  ..    ....++. .+.++||++.
T Consensus       319 ~~~~~~~~~~~~~~~~~~~~~L~~~---~g~~~~~~P~ga~y~~v~l~~~~~~~--~~----~~~~~~~~ll~~~gV~v~  389 (430)
T PLN00145        319 EEFFTKTLGLLKETADICYEKIKEI---KCITCPHKPEGSMFVMVKLDLSCLSG--IK----DDMDFCCKLAKEESVVVL  389 (430)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC---CCCCCCcCCCeeeEEEeccChhhcCC--CC----CHHHHHHHHHHhCCEEEe
Confidence            1   234555666666677766654   22221 2233 455566664211000  00    0233554 4557799998


Q ss_pred             ee-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          471 VS-----GDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       471 ~~-----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      |+     .+++||+  +..+++++++++++|.+++.+..
T Consensus       390 pG~~fg~~~~lRis--~~~~~~~l~~al~rl~~~~~~~~  426 (430)
T PLN00145        390 PGSALGMKNWLRIT--FAIDPPSLEDGLERLKSFCLRHA  426 (430)
T ss_pred             CccccCCCCeEEEE--eCCCHHHHHHHHHHHHHHHHHhc
Confidence            75     2679999  56789999999999999887654

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=99.82  E-value=5e-18  Score=173.37  Aligned_cols=326  Identities=13%  Similarity=0.108  Sum_probs=200.7

Q ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250           97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND  176 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~  176 (514)
                      .+++.++||..|-  +.+| .+|.+++|+.+.+.....|      +.....++.+.+++++. .+.+++++++++++++.
T Consensus        17 ~~~~~~i~l~~~~--~~~~-~p~~~~~a~~~~~~~~~~y------~~~~~~~lr~~ia~~~~-~~~~~i~it~Ga~~~l~   86 (356)
T PRK08056         17 ISPDQLLDFSANI--NPLG-MPVSLKRAIIDNLDCAERY------PDVEYRHLHQALARHHQ-VPASWILAGNGETESIF   86 (356)
T ss_pred             CChhhEEEecccc--CCCC-CCHHHHHHHHHHHHhcccC------cCccHHHHHHHHHHHhC-cChhhEEECCCHHHHHH
Confidence            4577899997653  5567 6788999998877653322      12235678888888874 45689999999999998


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL  256 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (514)
                      .+++...        ++  ++++.+++|......... .|....            .++....          +.+. .+
T Consensus        87 ~~~~~l~--------~g--~viv~~P~y~~~~~~~~~-~g~~~~------------~v~~~~~----------~~~~-~~  132 (356)
T PRK08056         87 AVVSGLK--------PR--RAMIVTPGFAEYRRALQQ-VGCEIR------------RYSLREA----------DGWQ-LT  132 (356)
T ss_pred             HHHHHhC--------CC--CEEEeCCCcHHHHHHHHH-cCCeEE------------EEecccc----------cCCC-cc
Confidence            8887541        32  477788888665322221 121110            0111000          0000 00


Q ss_pred             HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh
Q 010250          257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV  336 (514)
Q Consensus       257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv  336 (514)
                       +++.+.+.    +++.+|++...++.+|. ..+.+.+++|.++|++||+++|+||+|.+|...+.............++
T Consensus       133 -~~~~~~~~----~~~k~v~l~~p~NPTG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~  206 (356)
T PRK08056        133 -DAILEALT----PDLDCLFLCTPNNPTGL-LPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWV  206 (356)
T ss_pred             -HHHHHhcc----CCCCEEEEeCCcCCCCC-CCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEE
Confidence             12222222    23444445444555666 4567889999999999999999999998874333211000011112232


Q ss_pred             --chhhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHH
Q 010250          337 --SFAKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQ  412 (514)
Q Consensus       337 --~~sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~  412 (514)
                        +|||.++-.++++|++++ ++++++.+...         ...++.+.+++.++.++++.-. .+...+.++++.+++.
T Consensus       207 ~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~---------~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~  277 (356)
T PRK08056        207 LRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQ---------QMPWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFY  277 (356)
T ss_pred             EEechhhccCcchhheeeecCCHHHHHHHHHh---------CCCCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence              689988843389999998 46777777531         1245566777777777664111 1234566777778888


Q ss_pred             hhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-------CEEEEeCCCCCC
Q 010250          413 DGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------DNIMMSPPFIMS  485 (514)
Q Consensus       413 ~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-------~~iRi~p~~~~t  485 (514)
                      +.|+++..   +......|.++++.+...             ...+++.|+++||.++++.       +.|||+   ..+
T Consensus       278 ~~L~~~~~---~~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis---~~~  338 (356)
T PRK08056        278 QALCALPL---LTVWPGRANYLFLRCERP-------------DIDLQRALLTQRILIRSCANYPGLDSRYYRVA---IRS  338 (356)
T ss_pred             HHHhcCCC---cEEcCCCCcEEEEEcCCC-------------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE---EcC
Confidence            88876522   222233566777765421             2357788999999998642       479999   457


Q ss_pred             HHHHHHHHHHHHHHH
Q 010250          486 PEEVDELISKYGKAL  500 (514)
Q Consensus       486 ~e~id~~~~~l~~~l  500 (514)
                      +++.+.+++.|++++
T Consensus       339 ~~~~~~l~~~l~~~~  353 (356)
T PRK08056        339 AAENERLLAALRNVL  353 (356)
T ss_pred             HHHHHHHHHHHHHHH
Confidence            899999999888764

>PRK06290 aspartate aminotransferase; Provisional

Probab=99.82  E-value=7.2e-18  Score=174.99  Aligned_cols=350  Identities=12%  Similarity=0.077  Sum_probs=204.8

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcCc--CCCC-eEEEeCChhH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFTA--SKMA-KVFFTNSGSE  173 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~~--~~~~-~v~~~~sGse  173 (514)
                      .|+.++|+.+|.  ..++ .+|.+.+++.+.+.... ..+.. .+.......+++.+.+..+-  .+.+ +|++++|+.+
T Consensus        42 ~~~~~i~L~~g~--p~~~-~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~  117 (410)
T PRK06290         42 PDMELIDMGVGE--PDEM-ADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKP  117 (410)
T ss_pred             CCCCeEEcCCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHH
Confidence            467789998774  3455 46778888887664321 11111 22333344444444433221  2344 6999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS  253 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (514)
                      |+..++.+..        ..++.|++.+++|.+....+...+. ..            ..++....          ..+ 
T Consensus       118 al~~~~~~~~--------~~gd~Vlv~~P~y~~~~~~~~~~g~-~v------------~~v~~~~~----------~~~-  165 (410)
T PRK06290        118 ALAMLPSCFI--------NPGDVTLMTVPGYPVTGTHTKYYGG-EV------------YNLPLLEE----------NNF-  165 (410)
T ss_pred             HHHHHHHHhC--------CCCCEEEEeCCCCccHHHHHHHcCC-EE------------EEEecCCC----------cCC-
Confidence            9998887653        3456899999999886433222211 11            01111000          000 


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEc-cccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee-cccCC
Q 010250          254 TRLANNLEDLILKEGPETIAAFIAE-PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKYSI  331 (514)
Q Consensus       254 ~~~~~~le~li~~~~~~~~aavivE-pv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~-~~~gv  331 (514)
                      ..+++++++.+.    +++.+|++. | ++.+|.+. +.+.+++|.++|++||++||+||+|..+-..+....+ ...+.
T Consensus       166 ~~d~~~l~~~~~----~~~k~i~l~nP-~NPTG~v~-s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~  239 (410)
T PRK06290        166 LPDLDSIPKDIK----EKAKLLYLNYP-NNPTGAVA-TKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGA  239 (410)
T ss_pred             cCCHHHHHHhhc----ccceEEEEECC-CCCCCcCC-CHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCc
Confidence            001355555543    234455555 6 56666554 6788999999999999999999999876332321111 11111


Q ss_pred             C-Cch--hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHH
Q 010250          332 K-PDL--VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKI  407 (514)
Q Consensus       332 ~-pDi--v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~  407 (514)
                      . .++  -+|||.++..++++|++++++++++.+...       ......+.+.+++.++.++|+.-+ -++..+.++++
T Consensus       240 ~~~~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~~~-------~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~  312 (410)
T PRK06290        240 KEVGVEIHSLSKAYNMTGWRLAFVVGNELIVKAFATV-------KDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRR  312 (410)
T ss_pred             cccEEEEeechhhcCCchhheEeEEeCHHHHHHHHHH-------HhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHH
Confidence            1 123  368999864449999999999999888642       111233334466666666664311 12356667777


Q ss_pred             HHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE-ee---CCEEEEeCCC
Q 010250          408 APKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VS---GDNIMMSPPF  482 (514)
Q Consensus       408 ~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~-~~---g~~iRi~p~~  482 (514)
                      .+.+.+.|+++   ++ ...+.. |.++++.+++........    .....+++.|+++|+++. |+   ++++||+...
T Consensus       313 ~~~l~~~L~~~---g~-~~~~p~g~f~l~v~lp~~~~~~~~~----~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~  384 (410)
T PRK06290        313 LDKLVKILNEV---GF-KAEMPGGTFYLYVKAPKGTKSGIKF----ENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTF  384 (410)
T ss_pred             HHHHHHHHHhC---CC-eecCCCeeeEEEEECCCccccCCCC----CCHHHHHHHHHHhCCEEEECCccccCeEEEEEEc
Confidence            77888888765   22 112233 445566765421100000    014568889998875554 43   3579999321


Q ss_pred             -CCCHHHHHHHHHHHHHHHHHHH
Q 010250          483 -IMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       483 -~~t~e~id~~~~~l~~~l~~~~  504 (514)
                       ..++|+.++++++|++.|..++
T Consensus       385 ~~~~~~~~~~~~~~l~~~~~~~~  407 (410)
T PRK06290        385 EAKDEEEEDRILEEIKRRLSDVE  407 (410)
T ss_pred             ccccccchhHHHHHHHHHHhhcc
Confidence             2488999999999999987664

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=99.82  E-value=5e-18  Score=174.50  Aligned_cols=333  Identities=15%  Similarity=0.150  Sum_probs=201.8

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-------CCCCeEEEeCChh
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-------SKMAKVFFTNSGS  172 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-------~~~~~v~~~~sGs  172 (514)
                      +.++|+.+|.  .+++ .+|.+.+++.+.+......+. +  +.....+|.+.|++++..       ...++|++++|++
T Consensus        28 ~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~-Y--~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~  101 (374)
T PRK02610         28 IQLDRLDTNE--FPYD-LPPDLKQKLAWLYQQGIESNR-Y--PDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSD  101 (374)
T ss_pred             cceeEecCCC--CCCC-CCHHHHHHHHHHHhhcccccC-C--CCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChH
Confidence            4688888774  3344 578999999987765211000 1  122345666677766631       3557899999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhH
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEE  251 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  251 (514)
                      +++..++....       .++.++|++.+++|.+........+. ...            .++.. +.|.          
T Consensus       102 ~al~~~~~~~~-------~~g~~~Vlv~~P~y~~~~~~~~~~g~-~~~------------~~~~~~~~~~----------  151 (374)
T PRK02610        102 ELIRSLLIATC-------LGGEGSILVAEPTFSMYGILAQTLGI-PVV------------RVGRDPETFE----------  151 (374)
T ss_pred             HHHHHHHHHHc-------CCCCCeEEEcCCChHHHHHHHHHcCC-EEE------------EecCCcccCC----------
Confidence            99987765432       13334799999999876533322221 110            01100 0011          


Q ss_pred             HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC
Q 010250          252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI  331 (514)
Q Consensus       252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv  331 (514)
                         .++++|++.+......++.+|++.+.++.+|.+. +.+.+++|.++|  +|+++|.||++..|.... .  .....-
T Consensus       152 ---~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~-s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~~-~--~~~~~~  222 (374)
T PRK02610        152 ---IDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPL-TAAELEWLRSLP--EDILVVIDEAYFEFSQTT-L--VGELAQ  222 (374)
T ss_pred             ---CCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCC-CHHHHHHHHhcc--CCcEEEEeccccccCccc-h--HHHHhc
Confidence               1146777776532123455565545577778766 456688888877  499999999998773211 1  111111


Q ss_pred             CCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHH
Q 010250          332 KPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKI  407 (514)
Q Consensus       332 ~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~  407 (514)
                      .+.++   +|||.++..++++|++++++++++.+...       .  ..++.+.++..++.++++..+. .+...+..+.
T Consensus       223 ~~~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~-------~--~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~  293 (374)
T PRK02610        223 HPNWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKV-------R--LPYNLPSFSQLAAQLALEHRQELLAAIPEILQE  293 (374)
T ss_pred             CCCEEEEEecchhccCcccceeeeecCHHHHHHHHHh-------c--CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence            23333   68998864449999999999999888642       1  2345567777777777753211 0111222233


Q ss_pred             HHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHH
Q 010250          408 APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPE  487 (514)
Q Consensus       408 ~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e  487 (514)
                      .+.+.+.|+.+   +.+......|.++++.+....           ....+.+.|.++||.+.+..+.+||+  +. +++
T Consensus       294 r~~l~~~L~~~---~~~~~~p~~g~f~~~~l~~~~-----------~~~~~~~~l~~~gi~v~~~~~~lRls--~~-~~~  356 (374)
T PRK02610        294 RDRLYQALQEL---PQLRVWPSAANFLYLRLSQDA-----------ALAALHQALKAQGTLVRHTGGGLRIT--IG-TPE  356 (374)
T ss_pred             HHHHHHHHHhC---CCcEeCCCcceEEEEeCCCCC-----------CHHHHHHHHHHCCEEEEeCCCeEEEe--CC-CHH
Confidence            44555555544   222222445677777775321           13457788999999998877789999  33 567


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010250          488 EVDELISKYGKALKAT  503 (514)
Q Consensus       488 ~id~~~~~l~~~l~~~  503 (514)
                      ++++++++|++++.++
T Consensus       357 ~~~~~l~~l~~~l~~~  372 (374)
T PRK02610        357 ENQRTLERLQAALTQL  372 (374)
T ss_pred             HHHHHHHHHHHHHhhc
Confidence            8899999999887654

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=99.82  E-value=1.2e-17  Score=162.35  Aligned_cols=327  Identities=11%  Similarity=0.090  Sum_probs=213.6

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCcc
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK  195 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~  195 (514)
                      .+|.|++|+.+.++.+.++++.  .+.+....+.+...+.... ...+.++|+++..-++..+|+...        ..++
T Consensus        39 ~pp~i~~Al~~rvdhGvfGY~~--~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T--------~~gd  108 (388)
T COG1168          39 TPPEIIEALRERVDHGVFGYPY--GSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALT--------KPGD  108 (388)
T ss_pred             CCHHHHHHHHHHHhcCCCCCCC--CCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhC--------cCCC
Confidence            5899999999999987665441  1233444455555554432 356789999999999999998763        3457


Q ss_pred             EEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250          196 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF  275 (514)
Q Consensus       196 ~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav  275 (514)
                      .|++..+.|+--. ..+...+....              .+|-.+.        +.--..|+++||+.+.+.  .....+
T Consensus       109 ~Vvi~tPvY~PF~-~~i~~n~R~~i--------------~~pL~~~--------~~~y~iD~~~LE~~~~~~--~vkl~i  163 (388)
T COG1168         109 GVVIQTPVYPPFY-NAIKLNGRKVI--------------ENPLVED--------DGRYEIDFDALEKAFVDE--RVKLFI  163 (388)
T ss_pred             eeEecCCCchHHH-HHHhhcCcEEE--------------ecccccc--------CCcEEecHHHHHHHHhcC--CccEEE
Confidence            8999999987531 11111111111              1110000        001123468899888642  224566


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc-ccceecccCCCCc-----hhc--hhhhhcCCcc
Q 010250          276 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG-TMFGCDKYSIKPD-----LVS--FAKALSSAYM  347 (514)
Q Consensus       276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G-~~~~~~~~gv~pD-----iv~--~sK~l~gG~~  347 (514)
                      +++|-|+.|  .+++++.|.+|.+||.+||+++|+||+|+.+-..| +...+.  .+.|+     +++  -||++.-+++
T Consensus       164 LCnPHNP~G--rvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a--~ls~~~a~~~it~~saSKtFNlaGL  239 (388)
T COG1168         164 LCNPHNPTG--RVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFA--SLSERFADNSITLTSASKTFNLAGL  239 (388)
T ss_pred             EeCCCCCCC--ccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchh--hcChhhhcceEEEeeccccccchhh
Confidence            677766655  66789999999999999999999999999996666 333222  22222     222  3687654337


Q ss_pred             cceeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhhhhhccCCCce
Q 010250          348 PIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVKAFSDSPII  424 (514)
Q Consensus       348 pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~  424 (514)
                      .+++++. ++++...+...      .......+.|.++..|..+|++.-++  +++.+.++.+.+++.+.|++.  .|.+
T Consensus       240 ~~a~~Ii~n~~lr~~~~~~------l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~--~P~v  311 (388)
T COG1168         240 KCAYIIISNRELRAKFLKR------LKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKH--LPGV  311 (388)
T ss_pred             hheeEEecCHHHHHHHHHH------HHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhh--CCCc
Confidence            8887665 56665555431      12224556789999999999986543  567888999999999988763  4666


Q ss_pred             eEEEeeeee-EEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEE------eeC-CEEEEeCCCCCCHHHHHHHHHH
Q 010250          425 GEIRGTGLI-LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVR------VSG-DNIMMSPPFIMSPEEVDELISK  495 (514)
Q Consensus       425 ~~v~g~g~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~------~~g-~~iRi~p~~~~t~e~id~~~~~  495 (514)
                      .-....|.+ .+++|..-...          .+.+.+.|+++ +|.+.      +.| +.+|+.  +.++++-+++++++
T Consensus       312 ~v~~p~gTYL~WLD~r~l~l~----------d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN--~acpr~~L~eal~r  379 (388)
T COG1168         312 KVTEPQGTYLAWLDCRELGLD----------DSELAEFLLEEAKVALSPGSTFGEEGSGFVRLN--FACPRAILEEALER  379 (388)
T ss_pred             EEecCCCceeeeeeccccCCC----------hHHHHHHHHHhhcEeccCCCccCcCCCceEEEe--cCCCHHHHHHHHHH
Confidence            677778885 56788654322          12355555543 44444      334 459999  89999999999999


Q ss_pred             HHHHHHH
Q 010250          496 YGKALKA  502 (514)
Q Consensus       496 l~~~l~~  502 (514)
                      |..+++.
T Consensus       380 i~~al~~  386 (388)
T COG1168         380 LKRALKK  386 (388)
T ss_pred             HHHHHhc
Confidence            9988865

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=99.82  E-value=9.1e-18  Score=174.42  Aligned_cols=341  Identities=15%  Similarity=0.137  Sum_probs=206.8

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-cc-cc--c-cCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HS-FW--N-RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAN  175 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~-~~--~-~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~  175 (514)
                      .|||..+      .|..++.+++++.+.+...... +. .+  . .......++.+.++++++....++++|++|+++++
T Consensus        20 ~yld~~~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l   93 (403)
T TIGR01979        20 VYLDSAA------TSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDEEIVFTRGTTESI   93 (403)
T ss_pred             EEEeCcc------ccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHH
Confidence            6888643      3446788999998876542111 11 00  0 01223456778888888543356899999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY  252 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (514)
                      ..++..+...    .-..++.||+.+..|++.....   ....|...            ..++....+.           
T Consensus        94 ~~~~~~~~~~----~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~------------~~v~~~~~~~-----------  146 (403)
T TIGR01979        94 NLVAYSWGDS----NLKAGDEIVISEMEHHANIVPWQLLAERTGATL------------KFIPLDDDGT-----------  146 (403)
T ss_pred             HHHHHHhhhh----cCCCCCEEEECcchhhHHHHHHHHHHHhcCcEE------------EEEecCCCCC-----------
Confidence            8888754210    0023467887777666532111   11111110            0111110000           


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC
Q 010250          253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK  332 (514)
Q Consensus       253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~  332 (514)
                        .+.+++++.+.    +++.+|++..+++..|.+.|    +++|.++|++||+++|+|++|+ +|..  .  .+.....
T Consensus       147 --~~~~~l~~~i~----~~~~lv~~~~~~~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~g~~--~--~~~~~~~  211 (403)
T TIGR01979       147 --LDLDDLEKLLT----EKTKLVAITHVSNVLGTVNP----VEEIAKLAHQVGAKVLVDGAQA-VPHM--P--VDVQALD  211 (403)
T ss_pred             --CCHHHHHHHhc----cCCeEEEEEcccccccccCC----HHHHHHHHHHcCCEEEEEchhh-cCcc--c--cCccccC
Confidence              11466766664    35677888878888898887    9999999999999999999996 4322  1  2222334


Q ss_pred             Cchhc--hhhhhcCCcccceeEEeCHHHHHHhhhccCCC---Cc-------c---cccC-CCCCcHHHHHHHHHHHHHHh
Q 010250          333 PDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTL---GS-------F---SHGF-TYSGHPVSCAVAIEALKIYK  396 (514)
Q Consensus       333 pDiv~--~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~---~~-------~---~~~~-t~~~~pl~~aaa~aal~~~~  396 (514)
                      +|+++  +.|.++ + ..+|++++++++++.+.+.....   ..       +   .... .-+.+..+.++..++++.+.
T Consensus       212 ~d~~~~s~~K~~g-p-~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~  289 (403)
T TIGR01979       212 CDFYVFSGHKMYG-P-TGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLE  289 (403)
T ss_pred             CCEEEEecccccC-C-CCceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHH
Confidence            68775  459664 3 45889999998877664210000   00       0   0000 01234455666677787765


Q ss_pred             h---ccHHHHHHHHHHHHHhhhhhccCCCceeEE--EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe
Q 010250          397 E---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI--RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV  471 (514)
Q Consensus       397 ~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v--~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~  471 (514)
                      +   +.+.++..++.+++++.|+++....+....  ...+.++.+.+....            ...+.+.|.++||.++.
T Consensus       290 ~~g~~~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~------------~~~~~~~L~~~gI~v~~  357 (403)
T TIGR01979       290 AIGLENIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVH------------PHDVGTILDEEGIAVRS  357 (403)
T ss_pred             HhCHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcC------------HHHHHHHHhhCCEEEcc
Confidence            4   345788888888888888765222222111  123556667664211            33567888899999874


Q ss_pred             e-------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          472 S-------------GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       472 ~-------------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      +             +..+|++++...|++|+++++++|+++++.+
T Consensus       358 g~~~~~~~~~~~~~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~~  402 (403)
T TIGR01979       358 GHHCAQPLMRRFGVPATCRASFYIYNTEEDIDALVEALKKVRKFF  402 (403)
T ss_pred             hhhhhHHHHHHhCCCCEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence            2             3479999999999999999999999877643

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>PRK08912 hypothetical protein; Provisional

Probab=99.82  E-value=7.1e-18  Score=174.25  Aligned_cols=337  Identities=14%  Similarity=0.122  Sum_probs=200.7

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHHHHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEANDTQ  178 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA~~~A  178 (514)
                      ..+||..|...  ++ .+|.+.+++.+.+......+....+..+....+++.+.+.++ ..+.+ ++++++|+++|+..+
T Consensus        27 ~~i~l~~g~p~--~~-~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~  103 (387)
T PRK08912         27 GAINLGQGFPD--DP-GPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAA  103 (387)
T ss_pred             CeEEccCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHH
Confidence            46888877542  33 368888888887654211111111223333444444443332 12445 899999999999888


Q ss_pred             HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHH
Q 010250          179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  257 (514)
                      +....        ..++.|++.+++|.+........ |...            ..++.+ ..|.             .+.
T Consensus       104 ~~~~~--------~~gd~Vlv~~p~y~~~~~~~~~~-g~~~------------~~~~~~~~~~~-------------~~~  149 (387)
T PRK08912        104 LLALV--------EPGDEVVLFQPLYDAYLPLIRRA-GGVP------------RLVRLEPPHWR-------------LPR  149 (387)
T ss_pred             HHHhc--------CCCCEEEEeCCCchhhHHHHHHc-CCEE------------EEEecCcccCc-------------CCH
Confidence            87653        23468999999997764332221 1111            011111 0011             114


Q ss_pred             HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc--eecccCCCC-c
Q 010250          258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF--GCDKYSIKP-D  334 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~--~~~~~gv~p-D  334 (514)
                      +++++.+.   ++..+.+++.| ++.+|.+. +.+.+++|.++|++||+++|+||+|..+-..+..+  .....+..+ +
T Consensus       150 ~~l~~~~~---~~~~~v~l~~p-~NPtG~~~-s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~  224 (387)
T PRK08912        150 AALAAAFS---PRTKAVLLNNP-LNPAGKVF-PREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERT  224 (387)
T ss_pred             HHHHHHhC---ccceEEEEeCC-CCCcCccc-CHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCce
Confidence            66666553   22334555555 55566554 45789999999999999999999998663333211  111222221 2


Q ss_pred             hh--chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHH
Q 010250          335 LV--SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAP  409 (514)
Q Consensus       335 iv--~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~  409 (514)
                      ++  +|||.++ .| +++|++++++++++.+...       ....+++.++....++.+++....+  +++.++++++.+
T Consensus       225 i~~~S~SK~~g~~G-lRiG~~~~~~~~~~~l~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~  296 (387)
T PRK08912        225 VKIGSAGKIFSLTG-WKVGFVCAAPPLLRVLAKA-------HQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRD  296 (387)
T ss_pred             EEEeechhhccCcC-ceeEEEecCHHHHHHHHHH-------HhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence            32  6899888 45 8999999999999888642       1112355556556666665531111  245677788888


Q ss_pred             HHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee---------CCEEEE
Q 010250          410 KFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS---------GDNIMM  478 (514)
Q Consensus       410 ~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~---------g~~iRi  478 (514)
                      .+.+.|+.. ...+   .... |.++++.+.......        ....++..|+ ++||.+.++         .+++|+
T Consensus       297 ~l~~~L~~~-g~~~---~~~~g~~~l~~~l~~~~~~~--------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl  364 (387)
T PRK08912        297 RLAAGLRRI-GFPV---LPSQGTYFLTVDLAPLGLAE--------DDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRF  364 (387)
T ss_pred             HHHHHHHhC-CCcc---cCCCcceEEEecccccCCCC--------CHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEE
Confidence            888888765 2221   1223 456677765411000        1345777765 579998863         157999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      +  +..+++++++++++|.++++
T Consensus       365 ~--~~~~~~~l~~~l~rl~~~l~  385 (387)
T PRK08912        365 C--FAKRDATLDEAVERLAAARR  385 (387)
T ss_pred             E--EeCCHHHHHHHHHHHHHHHh
Confidence            9  66679999999999988775

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=99.82  E-value=7.2e-18  Score=171.79  Aligned_cols=330  Identities=12%  Similarity=0.074  Sum_probs=197.7

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHHHHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEANDTQ  178 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA~~~A  178 (514)
                      +.+||.+|..  .++ ..|++.+++.+.......|... .+..+....+++.+...++ ..+.+ +|++++++++|+..+
T Consensus         1 ~~~~~~~g~p--~~~-~~~~~~~~~~~~~~~~~~Y~~~-~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~   76 (350)
T TIGR03537         1 RLFDFGTGDP--KEP-TPPFIRKALIDAVPEVSQYPSA-LGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHF   76 (350)
T ss_pred             CeEeccCCCC--CCC-CCHHHHHHHHHHHhccCCCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHH
Confidence            3678887753  344 3788999988876543222111 1222333444444443322 13445 899999999999888


Q ss_pred             HHHHHHHHhhcCCCC--ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHHH
Q 010250          179 VKLVWYYNNALGRPN--KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYST  254 (514)
Q Consensus       179 lk~a~~~~~~~~~~~--~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  254 (514)
                      +....       .++  ++.|++.+++|.+........+....             .++..  ..|.             
T Consensus        77 ~~~~~-------~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~-------------~v~~~~~~~~~-------------  123 (350)
T TIGR03537        77 PLVFI-------DPEEDRRRVIFGTPGYPVYERGALFAGGEPT-------------AVKLKKEDGFL-------------  123 (350)
T ss_pred             HHHHc-------CCCCCCceEEEcCCCCcchHHHHHhcCCEEE-------------EcccCcccCCc-------------
Confidence            76552       122  25899999999887544433222111             01110  0010             


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCc
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD  334 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pD  334 (514)
                      .+++++++++..    ++.++++.+.++.+|.+. +.+.+++|.++|++||+++|+||+|..+...+........  .+|
T Consensus       124 ~d~~~l~~~~~~----~~~~i~i~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~  196 (350)
T TIGR03537       124 LRLEKVEKSILE----ETKIVWINYPHNPTGATA-PRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHSALEV--GIE  196 (350)
T ss_pred             cCHHHHHHhhhh----ccEEEEEeCCCCCcCccc-CHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCchhhc--CcC
Confidence            124667766642    344555555566777554 6688999999999999999999999754221211111111  222


Q ss_pred             -hh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHH
Q 010250          335 -LV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAP  409 (514)
Q Consensus       335 -iv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~  409 (514)
                       ++   +|||.++..++++|++++++++++.+...       ....+.+.++++..++.+++..-+ .++..++++++.+
T Consensus       197 ~~i~~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~  269 (350)
T TIGR03537       197 NVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKL-------RANFGVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRD  269 (350)
T ss_pred             CEEEEeecccccCCccccceeeecCHHHHHHHHHH-------HHhhccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence             22   58998865448999999999988887642       111233445566666666654100 0234556666777


Q ss_pred             HHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------CCEEEEeCC
Q 010250          410 KFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMSPP  481 (514)
Q Consensus       410 ~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g~~iRi~p~  481 (514)
                      .+.+.|++.   .+ ..... -|.++++++.+..           ....+++.|.++||.+.++       .+.+|++  
T Consensus       270 ~~~~~l~~~---g~-~~~~~~g~~~~~~~~~~~~-----------~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~--  332 (350)
T TIGR03537       270 LFIEFFNKV---GL-EYLYPDATFYLWVKVPSGI-----------DAKDYALRLLENGIVVAPGENFGSGEEGYVRVA--  332 (350)
T ss_pred             HHHHHHHHC---CC-cccCCCeEEEEEEECCCCC-----------CHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEE--
Confidence            777777654   21 11122 3556677775421           1346888899999999863       2569999  


Q ss_pred             CCCCHHHHHHHHHHHHH
Q 010250          482 FIMSPEEVDELISKYGK  498 (514)
Q Consensus       482 ~~~t~e~id~~~~~l~~  498 (514)
                      +..+++++++++++|++
T Consensus       333 ~~~~~~~~~~~l~~~~~  349 (350)
T TIGR03537       333 LVPTLEECEEALRLWER  349 (350)
T ss_pred             ecCCHHHHHHHHHHHhc
Confidence            55788999999988875

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK05957 aspartate aminotransferase; Provisional

Probab=99.82  E-value=1.3e-17  Score=172.41  Aligned_cols=340  Identities=14%  Similarity=0.097  Sum_probs=205.9

Q ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcCc-CC-CCeEEEeCChhHHHHHH
Q 010250          102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTA-SK-MAKVFFTNSGSEANDTQ  178 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~~-~~-~~~v~~~~sGseA~~~A  178 (514)
                      ++|+..|..  .+. .++.+.+|+.+.+..... .+....+..+....+++.+.+.++. .+ .+.+++++++++++..+
T Consensus        29 ~~~l~~g~~--~~~-~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~  105 (389)
T PRK05957         29 TISLGQGVV--SYP-PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNA  105 (389)
T ss_pred             eEEccCCCC--CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHH
Confidence            577766542  244 477889999887754321 1222233445666778888777642 12 56899999999999888


Q ss_pred             HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250          179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN  258 (514)
Q Consensus       179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (514)
                      +....        ..++.|++.+++|.+....... .|...            ..++....|.             .+.+
T Consensus       106 ~~~~~--------~~gd~Vlv~~P~y~~~~~~~~~-~g~~~------------~~v~~~~~~~-------------~d~~  151 (389)
T PRK05957        106 ILAIT--------DPGDEIILNTPYYFNHEMAITM-AGCQP------------ILVPTDDNYQ-------------LQPE  151 (389)
T ss_pred             HHHhc--------CCCCEEEEeCCCCcCHHHHHHh-cCCEE------------EEeecCCCCC-------------cCHH
Confidence            87653        3346799988988665322111 11111            1111111111             1246


Q ss_pred             HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-cee-cccCCCCc--
Q 010250          259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGC-DKYSIKPD--  334 (514)
Q Consensus       259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~-~~~gv~pD--  334 (514)
                      ++++.+.    +++.+|++...++.+|.+. +++.+++|.++|++||+++|+||++..|...+.. ... ...+..+.  
T Consensus       152 ~l~~~i~----~~~klv~~~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i  226 (389)
T PRK05957        152 AIEQAIT----PKTRAIVTISPNNPTGVVY-PEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTI  226 (389)
T ss_pred             HHHHhcC----cCceEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEE
Confidence            6776653    2344545554566677655 4578999999999999999999999877433211 111 11121222  


Q ss_pred             -hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccHHHHHHHHHHHH
Q 010250          335 -LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIAPKF  411 (514)
Q Consensus       335 -iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~~~~~~~~~~~l  411 (514)
                       +-+|||.++..++++|++++++++++.+...       ......+.+.+++.++..+|+.-.  -++..+.++++.+.+
T Consensus       227 ~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l  299 (389)
T PRK05957        227 SLYSLSKAYGFASWRIGYMVIPIHLLEAIKKI-------QDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQIL  299 (389)
T ss_pred             EEecchhhccCccceeEEEecCHHHHHHHHHH-------HhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHH
Confidence             3368998874338999999999999888742       111233445566666666664210  123345567777777


Q ss_pred             HhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEEeCCC
Q 010250          412 QDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMMSPPF  482 (514)
Q Consensus       412 ~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi~p~~  482 (514)
                      .+.|+++...  ....... |.++++.+.....           ...+++.|. ++||.+.++       ++++|++.. 
T Consensus       300 ~~~L~~~~~~--~~~~~~~gg~~~~~~~~~~~~-----------~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~-  365 (389)
T PRK05957        300 LKSLGQLQDR--CTLHPANGAFYCFLKVNTDLN-----------DFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYG-  365 (389)
T ss_pred             HHHHHhcCCC--ccccCCCeeEEEEEeCCCCCC-----------hHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEe-
Confidence            7777765221  1111122 5667777643211           345777776 589999875       246999942 


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHH
Q 010250          483 IMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       483 ~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      ..+++++++++++|.+.++++.
T Consensus       366 ~~~~~~l~~~~~~l~~~~~~~~  387 (389)
T PRK05957        366 ALQKATAKEGIERLVQGLKTIV  387 (389)
T ss_pred             cCCHHHHHHHHHHHHHHHHhhh
Confidence            3589999999999998887654

>PLN02187 rooty/superroot1

Probab=99.82  E-value=5.1e-18  Score=178.48  Aligned_cols=352  Identities=14%  Similarity=0.092  Sum_probs=208.4

Q ss_pred             CCCCEEEEccCCcccccCC-C-CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-----cCCCCeEEEeC
Q 010250           97 VNGKKYLDSLAGLWCTALG-G-SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-----ASKMAKVFFTN  169 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lG-h-~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-----~~~~~~v~~~~  169 (514)
                      .+++.+|++..|.. ..+. . .++++.+++.+.++..... . + .+.....++.+.+++++.     ....++|++++
T Consensus        63 ~~~~~vi~l~~Gdp-~~~p~~~~~~~~~~~~~~~~~~~~~~-~-Y-~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~  138 (462)
T PLN02187         63 DVNKTILPLGHGDP-SVYPCFRTCIEAEDAVVDVLRSGKGN-S-Y-GPGAGILPARRAVADYMNRDLPHKLTPEDIFLTA  138 (462)
T ss_pred             CCCCCeEECCCCCC-CCCCCCCCCHHHHHHHHHHHhCCCCC-C-C-CCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeC
Confidence            34678888876622 1112 1 3567899998888653211 0 1 122223445555555542     23568999999


Q ss_pred             ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCC
Q 010250          170 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGE  247 (514)
Q Consensus       170 sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  247 (514)
                      ++++|+..++....        ...+.|++.+++|.+........ |....            .++..  +.|.      
T Consensus       139 G~~~al~~~~~~l~--------~pGd~Vlv~~P~y~~y~~~~~~~-g~~~~------------~~~l~~~~~~~------  191 (462)
T PLN02187        139 GCNQGIEIVFESLA--------RPNANILLPRPGFPHYDARAAYS-GLEVR------------KFDLLPEKEWE------  191 (462)
T ss_pred             CHHHHHHHHHHHhc--------CCCCEEEEeCCCCccHHHHHHHc-CCEEE------------EEeCccccCCc------
Confidence            99999999998763        34578999999998864322221 11110            11110  0111      


Q ss_pred             ChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-ee
Q 010250          248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC  326 (514)
Q Consensus       248 ~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~  326 (514)
                             .++++|++++.   ++..+.+++.|. +.+|.+ .+.+.+++|.++|++||+++|+||+|..|-..|..+ ..
T Consensus       192 -------~d~~~l~~~~~---~~~~~v~i~nP~-NPTG~v-~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~  259 (462)
T PLN02187        192 -------IDLEGIEAIAD---ENTVAMVVINPN-NPCGNV-YSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSM  259 (462)
T ss_pred             -------cCHHHHHHhcC---CCcEEEEEeCCC-CCCCCc-cCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeH
Confidence                   11466766553   345678888886 455544 467889999999999999999999999864434322 11


Q ss_pred             cccCCCCchh---chhhhhcCCcccceeEEeC-HH-H---HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-
Q 010250          327 DKYSIKPDLV---SFAKALSSAYMPIGAILVS-PE-V---SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-  397 (514)
Q Consensus       327 ~~~gv~pDiv---~~sK~l~gG~~pig~v~~~-~~-i---~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-  397 (514)
                      ..+.-...++   +|||.++..++++|++++. ++ +   ++.+....    . ....+.+.+.+++.++.++|+...+ 
T Consensus       260 ~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~----~-~~~~~~~~s~~~Q~a~~~~L~~~~~~  334 (462)
T PLN02187        260 GKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIK----Q-NLDVTPDPATIIQAALPAILEKADKN  334 (462)
T ss_pred             HHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHH----H-hccccCCCCHHHHHHHHHHHhcCcHH
Confidence            1111111233   6899866544999999983 32 2   23333210    0 1112223467778888777752111 


Q ss_pred             --ccHHHHHHHHHHHHHhhhhhccCCCcee-E-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC
Q 010250          398 --RNIVEQVNKIAPKFQDGVKAFSDSPIIG-E-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG  473 (514)
Q Consensus       398 --~~~~~~~~~~~~~l~~~L~~l~~~~~~~-~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g  473 (514)
                        ++..+.++++.+.+.+.|+++   +... . ...-|.++.+.+.......  ..   ...+.+...+.++||++.|+.
T Consensus       335 ~l~~~~~~l~~~r~~l~~~L~~~---~~~~~~~~P~gg~fl~~~l~~~~~~~--~~---~~~~~~~~ll~~~gV~v~pG~  406 (462)
T PLN02187        335 FFAKKNKILKHNVDLVCDRLKDI---PCVVCPKKPESCTYLLTKLELSLMDN--IK---DDIDFCVKLAREENLVFLPGD  406 (462)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhC---CCCcCCCCCCEeEEEEeecChhhCCC--CC---CHHHHHHHHHhhCCEEEECcc
Confidence              234556677777777777765   2221 1 1223566777664211000  00   012234456688999998752


Q ss_pred             -----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250          474 -----DNIMMSPPFIMSPEEVDELISKYGKALKATEER  506 (514)
Q Consensus       474 -----~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~  506 (514)
                           ++|||+  +..+++.+++++++|.+++++..++
T Consensus       407 ~fg~~~~iRis--~~~~~e~l~~al~rL~~~l~~~~~~  442 (462)
T PLN02187        407 ALGLKNWMRIT--IGVEAHMLEDALERLKGFCTRHAKK  442 (462)
T ss_pred             ccCCCCeEEEE--eCCCHHHHHHHHHHHHHHHHHhhhc
Confidence                 579999  6678999999999999999876643

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=99.82  E-value=1.3e-17  Score=172.78  Aligned_cols=338  Identities=13%  Similarity=0.072  Sum_probs=201.6

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc--CCC-CeEEEeCChhHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA--SKM-AKVFFTNSGSEA  174 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~--~~~-~~v~~~~sGseA  174 (514)
                      .|+.++||..|..  .++ .++.+.+++.+.+.....|... .+..+....+++.+.+.++.  ... ++|++++|+++|
T Consensus        27 ~~~~~i~l~~~~p--~~~-~~~~~~~~~~~~~~~~~~Y~~~-~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~a  102 (396)
T PRK09147         27 ADLPPISLSIGEP--KHP-TPAFIKDALAANLDGLASYPTT-AGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREA  102 (396)
T ss_pred             cCCCeEecCCCCC--CCC-CCHHHHHHHHHHhhhhcCCCCC-CCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHH
Confidence            4889999987753  344 3678889988776543222211 22333444555555444331  233 489999999999


Q ss_pred             HHHHHHHHHHHHhhcCCC--CccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250          175 NDTQVKLVWYYNNALGRP--NKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY  252 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~--~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (514)
                      +..+++...      . +  +++.|++.+++|.+........+. ..            ..+++...          +.|
T Consensus       103 l~~~~~~l~------~-~~~~gd~vlv~~P~y~~~~~~~~~~g~-~~------------~~vp~~~~----------~~~  152 (396)
T PRK09147        103 LFAFAQTVI------D-RDGPGPLVVCPNPFYQIYEGAALLAGA-EP------------YFLNCDPA----------NNF  152 (396)
T ss_pred             HHHHHHHHc------C-CCCCCCEEEEcCCCccchHHHHHhcCC-EE------------EEeccCcc----------ccC
Confidence            999988663      1 2  146799999999876433222111 11            11111100          001


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--cce-e---
Q 010250          253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MFG-C---  326 (514)
Q Consensus       253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--~~~-~---  326 (514)
                       ..+.+.+++.+..   +..+.+++.| ++.+|.+. +++.+++|.++|++||+++|.||+|..|-..+.  ... .   
T Consensus       153 -~~d~~~l~~~~~~---~~k~i~l~nP-~NPTG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~  226 (396)
T PRK09147        153 -APDFDAVPAEVWA---RTQLLFVCSP-GNPTGAVL-PLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAA  226 (396)
T ss_pred             -ccCHHHHHHHHhh---ccEEEEEcCC-CCCcCccC-CHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhc
Confidence             0124566555432   2334455555 55566544 678999999999999999999999987633331  111 0   


Q ss_pred             cccCCC--Cchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccH
Q 010250          327 DKYSIK--PDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNI  400 (514)
Q Consensus       327 ~~~gv~--pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~  400 (514)
                      ...+..  +.++   +|||.++..++++|++++++++++.+...       ....+++.+++.+.++.+++..-+ -.+.
T Consensus       227 ~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~~~~~~-------~~~~~~~~~~~~q~a~~~~~~~~~~~~~~  299 (396)
T PRK09147        227 AELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLKKFLLY-------RTYHGCAMPPAVQAASIAAWNDEAHVREN  299 (396)
T ss_pred             cccCccccccEEEEeccccccCCccceeeeecCCHHHHHHHHHH-------hhhcccCCCHHHHHHHHHHhcchhHHHHH
Confidence            011111  1222   68997655449999999999998887631       111245567777777777663110 0123


Q ss_pred             HHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------
Q 010250          401 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------  472 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------  472 (514)
                      .+.++++.+.+.+.|++.  ...  .....|.++++++.. .            ...++..++ ++||.+.++       
T Consensus       300 ~~~~~~~~~~~~~~L~~~--~~~--~~p~~g~f~~~~~~~-~------------~~~~~~~ll~~~gv~v~pg~~f~~~~  362 (396)
T PRK09147        300 RALYREKFDAVTPILAPV--LDV--QLPDAGFYLWAKVPG-D------------DTEFARRLYADYNVTVLPGSYLAREA  362 (396)
T ss_pred             HHHHHHHHHHHHHHHHHh--cCC--CCCCeeEEEEEECCC-C------------HHHHHHHHHHhCCEEEeCCccccccc
Confidence            455666666666666553  111  122357778888751 0            234666665 689998753       


Q ss_pred             ------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          473 ------GDNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       473 ------g~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                            .+.+||+  +..+++++++++++|.+++.
T Consensus       363 ~~~~~~~~~iRi~--~~~~~~~l~~~l~rl~~~~~  395 (396)
T PRK09147        363 HGVNPGAGRVRIA--LVAPLAECVEAAERIVDFCR  395 (396)
T ss_pred             cCCCCCCCeEEEE--ecCCHHHHHHHHHHHHHHhc
Confidence                  1469999  66789999999999988763

>PRK08361 aspartate aminotransferase; Provisional

Probab=99.82  E-value=6e-18  Score=175.02  Aligned_cols=337  Identities=15%  Similarity=0.145  Sum_probs=200.6

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----C-cCCCCeEEEeCChhHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----T-ASKMAKVFFTNSGSEA  174 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~-~~~~~~v~~~~sGseA  174 (514)
                      ..++||..|.  ..++. ++.+.+++.+.+......+.    +.....+|.+.+++++    + ....+++++++|+++|
T Consensus        33 ~~~i~l~~~~--~~~~~-~~~~~~~~~~~~~~~~~~Y~----~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~a  105 (391)
T PRK08361         33 ENVISLGIGE--PDFDT-PKNIKEAAKRALDEGWTHYT----PNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEA  105 (391)
T ss_pred             cCeEEcCCCC--CCCCC-CHHHHHHHHHHHhcCCCCCC----CCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHH
Confidence            3578987764  33443 67888988887764221111    1122334445555443    2 2345799999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      +..+++...        ..++.|++.+++|.+...... ..|....            .++....          ..+ .
T Consensus       106 l~~~~~~l~--------~~g~~Vlv~~p~y~~~~~~~~-~~g~~~~------------~v~~~~~----------~~~-~  153 (391)
T PRK08361        106 TYLAFESLL--------EEGDEVIIPDPAFVCYVEDAK-IAEAKPI------------RIPLREE----------NEF-Q  153 (391)
T ss_pred             HHHHHHHhc--------CCCCEEEEcCCCCcccHHHHH-HcCCEEE------------EEecCCc----------cCC-C
Confidence            999887653        234689999999877532221 1221110            0111000          000 0


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceecccCCCC
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDKYSIKP  333 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~~gv~p  333 (514)
                      .+++++++.+.    +++.++++...++.+|.+. +.+.+++|.++|+++++++|+||++..|...+.. ..........
T Consensus       154 ~d~~~l~~~i~----~~~~~v~i~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~  228 (391)
T PRK08361        154 PDPDELLELIT----KRTRMIVINYPNNPTGATL-DKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDN  228 (391)
T ss_pred             CCHHHHHHhcc----cccEEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCC
Confidence            12466766654    2344455554466677655 5678899999999999999999999876332221 1111111112


Q ss_pred             chh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh----ccHHHHHHHH
Q 010250          334 DLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE----RNIVEQVNKI  407 (514)
Q Consensus       334 Div--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~----~~~~~~~~~~  407 (514)
                      +++  +|||.++..++++|++++++++++.+...       ....+++.+.+.+.++.++|+.-..    ++..+.++++
T Consensus       229 ~i~~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~  301 (391)
T PRK08361        229 TILANSFSKTFAMTGWRLGFVIAPEQVIKDMIKL-------HAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNER  301 (391)
T ss_pred             EEEEecCchhcCCcHhhhhhhccCHHHHHHHHHH-------HhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHH
Confidence            233  68998874338999999999998877531       1112345566777777666642111    2334556666


Q ss_pred             HHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEE
Q 010250          408 APKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMM  478 (514)
Q Consensus       408 ~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi  478 (514)
                      .+.+.+.|+++   +.+...... |.++++.+.+...          ....+...|+ ++||.+.++       .+.+|+
T Consensus       302 ~~~~~~~L~~~---~~~~~~~p~g~~~~~~~l~~~~~----------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi  368 (391)
T PRK08361        302 RKLVLKRLKEM---PHIKVFEPKGAFYVFANIDETGM----------SSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRI  368 (391)
T ss_pred             HHHHHHHHHhC---CCCeecCCCEEEEEEEECCCCCC----------CHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEE
Confidence            67777777664   222222333 4566677753111          0334667776 579999864       146999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +  +..+++++++++++|.+++++
T Consensus       369 ~--~~~~~~~l~~al~~l~~~l~~  390 (391)
T PRK08361        369 S--YATSKEKLIEAMERMEKALEE  390 (391)
T ss_pred             E--ecCCHHHHHHHHHHHHHHHhc
Confidence            9  567889999999999988764

>PRK02948 cysteine desulfurase; Provisional

Probab=99.82  E-value=4.4e-18  Score=175.46  Aligned_cols=334  Identities=18%  Similarity=0.197  Sum_probs=203.0

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-cc---ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HS---FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND  176 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~---~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~  176 (514)
                      .|||..+.      |.-++.+++++.+.++..... +.   ......+...++.+.++++++. +.+.|+|++|+++++.
T Consensus         2 ~yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~-~~~~i~~~~g~t~a~~   74 (381)
T PRK02948          2 IYLDYAAT------TPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGG-EEQGIYFTSGGTESNY   74 (381)
T ss_pred             EeccCCCC------CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCC-CCCeEEEeCcHHHHHH
Confidence            47775433      456899999999887642111 11   0011124456777888888743 4578999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee---ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS  253 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~---~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (514)
                      .++..+....   . .+++.|++ ....|.+.....   ...|..            +..++....             .
T Consensus        75 ~~~~~~~~~~---~-~~g~~vv~-~~~~h~s~~~~~~~~~~~g~~------------v~~v~~~~~-------------~  124 (381)
T PRK02948         75 LAIQSLLNAL---P-QNKKHIIT-TPMEHASIHSYFQSLESQGYT------------VTEIPVDKS-------------G  124 (381)
T ss_pred             HHHHHHHHhc---c-CCCCEEEE-CCcccHHHHHHHHHHHhCCCE------------EEEEeeCCC-------------C
Confidence            9988764210   0 12344554 444444322211   111111            011111110             1


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCC
Q 010250          254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP  333 (514)
Q Consensus       254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~p  333 (514)
                      +.++++|++.+.    +++.+|+++.+++++|.+.|    +++|.++|+++|+++|+|++|+ ||..+  ...+.+  ..
T Consensus       125 ~~d~~~l~~~l~----~~~~lv~~~~~~n~tG~~~~----~~~I~~l~~~~~~~vivD~~~~-~g~~~--~~~~~~--~~  191 (381)
T PRK02948        125 LIRLVDLERAIT----PDTVLASIQHANSEIGTIQP----IAEIGALLKKYNVLFHSDCVQT-FGKLP--IDVFEM--GI  191 (381)
T ss_pred             CCCHHHHHHhcC----CCCEEEEEECCcCCcEeehh----HHHHHHHHHHcCCEEEEEChhh-ccccc--cCcccC--CC
Confidence            112567776663    34678888888999999987    8999999999999999999886 76442  222333  35


Q ss_pred             chh--chhhhhcCCcccceeEEeCHHH-HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHH
Q 010250          334 DLV--SFAKALSSAYMPIGAILVSPEV-SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIA  408 (514)
Q Consensus       334 Div--~~sK~l~gG~~pig~v~~~~~i-~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~  408 (514)
                      |++  +++|.++.  ..+|++++++++ +..+.......+.+   ..++.|..+.+++.++++.+.+  ++..++++++.
T Consensus       192 d~~~~s~~K~~gp--~G~G~l~~~~~~~~~~~~~~~~~~~~~---~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~  266 (381)
T PRK02948        192 DSLSVSAHKIYGP--KGVGAVYINPQVRWKPVFPGTTHEKGF---RPGTVNVPGIAAFLTAAENILKNMQEESLRFKELR  266 (381)
T ss_pred             CEEEecHHhcCCC--CcEEEEEEcCCCCCCCcccCCCCCCCc---CCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            766  56797653  347888888775 11111100000111   1345677788888888876532  35678888899


Q ss_pred             HHHHhhhhhccCCCceeEEEe-----eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----------
Q 010250          409 PKFQDGVKAFSDSPIIGEIRG-----TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----------  472 (514)
Q Consensus       409 ~~l~~~L~~l~~~~~~~~v~g-----~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----------  472 (514)
                      +++++.|+++ ...+.  ..+     ...++.+.+...            ....+...|.++||.++.+           
T Consensus       267 ~~l~~~L~~~-~~~v~--~~~~~~~~~~~i~~~~~~~~------------~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~  331 (381)
T PRK02948        267 SYFLEQIQTL-PLPIE--VEGHSTSCLPHIIGVTIKGI------------EGQYTMLECNRRGIAISTGSACQVGKQEPS  331 (381)
T ss_pred             HHHHHHHhcC-CCCEE--EeCCCccCcCCEEEEEeCCC------------CHHHHHHhcccCCEEEEchHhcCCCCCCCC
Confidence            9999998876 22211  111     111233333211            0334666788899999842           


Q ss_pred             -------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          473 -------------GDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       473 -------------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                                   ++.||+++...+|++|+|++++.|+++++++-
T Consensus       332 ~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~~~~  376 (381)
T PRK02948        332 KTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQFY  376 (381)
T ss_pred             HHHHHcCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Confidence                         24699999999999999999999998876553

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=99.82  E-value=3.6e-18  Score=174.44  Aligned_cols=320  Identities=13%  Similarity=0.061  Sum_probs=196.8

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC--cCCCCeEEEeCChhHHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT--ASKMAKVFFTNSGSEAN  175 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~--~~~~~~v~~~~sGseA~  175 (514)
                      ++..++|+.+|.   +....+|.+.+++.+...... |.. ..+..+...++++.+.+..+  +...+++++++|+++++
T Consensus        19 ~~~~~i~l~~~~---p~~~~~~~~~~~~~~~~~~~~-Y~~-~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i   93 (357)
T TIGR03539        19 HPDGIVDLSVGT---PVDPVPPLIRAALAAAADAPG-YPQ-TWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELV   93 (357)
T ss_pred             CCCCeEEccCCC---CCCCCCHHHHHHHHHHHhhCC-CCc-ccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHH
Confidence            466789998873   334357888888877654321 211 12233445556666655433  24568999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      ..++.+..      . ..++.|++.+++|.+........ |....              .+++                 
T Consensus        94 ~~~~~~l~------~-~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~--------------~v~~-----------------  134 (357)
T TIGR03539        94 AWLPTLLG------L-GPGDTVVIPELAYPTYEVGALLA-GATPV--------------AADD-----------------  134 (357)
T ss_pred             HHHHHHHc------C-CCCCEEEECCCCcHHHHHHHHhc-CCEEe--------------ccCC-----------------
Confidence            88776541      1 23568999999998764332221 11100              0000                 


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecc--cCCC
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDK--YSIK  332 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~--~gv~  332 (514)
                       .+.++       ++++++++++..++.+|.+. +.+.+++|.++|++||+++|+||+|..|...+.... ...  .+..
T Consensus       135 -~~~l~-------~~~~~~v~~~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~  205 (357)
T TIGR03539       135 -PTELD-------PVGPDLIWLNSPGNPTGRVL-SVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGD  205 (357)
T ss_pred             -hhhcC-------ccCccEEEEeCCCCCcCccC-CHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCc
Confidence             11111       13456677666666777655 557899999999999999999999987755443211 110  1111


Q ss_pred             -Cc-hh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHH
Q 010250          333 -PD-LV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKI  407 (514)
Q Consensus       333 -pD-iv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~  407 (514)
                       .. ++  +|||.++.+++++|++++++++++.+...       .....++.+.+++.++.++|+... .+...+.++++
T Consensus       206 ~~~vi~~~S~SK~~~~~G~R~G~~i~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~  278 (357)
T TIGR03539       206 HTGLLAVHSLSKRSNLAGYRAGFVAGDPALVAELLTV-------RKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAAR  278 (357)
T ss_pred             cccEEEEeccccccCCCceeEEEEecCHHHHHHHHHH-------HhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence             11 33  68998754339999999999998887631       122345567777777777774211 12345666777


Q ss_pred             HHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------CCEEEEe
Q 010250          408 APKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMS  479 (514)
Q Consensus       408 ~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g~~iRi~  479 (514)
                      .+.+.+.|++. ...+   ..+. |.++++.+..+             ...+.+.|.++||.+.++       .+.|||+
T Consensus       279 ~~~~~~~L~~~-g~~~---~~p~~~~~~~~~~~~~-------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis  341 (357)
T TIGR03539       279 RAQLKPALEKA-GFRI---DHSEAGLYLWATRGED-------------AWDTVDRLAELGILVAPGDFYGPAGSQHVRVA  341 (357)
T ss_pred             HHHHHHHHHHc-CCCC---cCCCccEEEEEECCCC-------------HHHHHHHHHhCCEEECCccccCCCCCCeEEEE
Confidence            77777777664 2221   1122 44555554211             334778889999999864       2579999


Q ss_pred             CCCCCCHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKY  496 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l  496 (514)
                        +..+++++++++++|
T Consensus       342 --~~~~~~~i~~~~~~l  356 (357)
T TIGR03539       342 --LTATDERIAAAVARL  356 (357)
T ss_pred             --ecCCHHHHHHHHHhh
Confidence              556889999999876

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=99.82  E-value=4.8e-18  Score=177.92  Aligned_cols=327  Identities=14%  Similarity=0.093  Sum_probs=202.2

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc--CCCCeEEEeCChhHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA--SKMAKVFFTNSGSEANDT  177 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~--~~~~~v~~~~sGseA~~~  177 (514)
                      ...+||.+|   .+..-..|.+.+++.+.+.....|    + ......+|.+.+++++..  ...++|++++|+.+|+..
T Consensus        85 ~~~i~L~~g---~p~~~~~p~~~~~~~~~~~~~~~Y----~-~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~  156 (431)
T PRK15481         85 TPLHDLAGG---NPDPQRLPDLSRYFARLSRTPRLY----G-DAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIER  156 (431)
T ss_pred             chhhhhhcC---CCChhHhHHHHHHHHHhhhhhhhc----C-CcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHH
Confidence            345677655   222223466777776655432222    1 122234566666666531  123589999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      +++...        ..++.|++.+++|.+........+....             .++...           +.   .+.
T Consensus       157 ~~~~l~--------~pgd~Vlv~~P~y~~~~~~~~~~g~~~~-------------~v~~~~-----------~g---~~~  201 (431)
T PRK15481        157 LLCAHL--------LPGDSVAVEDPCFLSSINMLRYAGFSAS-------------PVSVDA-----------EG---MQP  201 (431)
T ss_pred             HHHHhC--------CCCCEEEEeCCCcHHHHHHHHHcCCeEE-------------eeccCC-----------CC---CCH
Confidence            988663        3357899999999887543333222110             111100           00   114


Q ss_pred             HHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHhc-CCEEEEechhcCcccccccceecccCCCCch
Q 010250          258 NNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKY-DILFIADEVICAFGRLGTMFGCDKYSIKPDL  335 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~~~-gillI~DEv~tG~gr~G~~~~~~~~gv~pDi  335 (514)
                      ++|++++..    ++.++++.| .++.+|.+. +.+.+++|.++|++| ++++|.||+|..|...+..-...  ...+.+
T Consensus       202 ~~l~~~~~~----~~k~i~~~p~p~NPTG~~~-s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~--~~~~~v  274 (431)
T PRK15481        202 EKLERALAQ----GARAVILTPRAHNPTGCSL-SARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIP--QTTQRW  274 (431)
T ss_pred             HHHHHHHhc----CCCEEEECCCCCCCCCccC-CHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCc--CCCCCE
Confidence            677777642    344445543 345556554 568889999999999 99999999998774322111111  112333


Q ss_pred             h---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh----ccHHHHHHHHH
Q 010250          336 V---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE----RNIVEQVNKIA  408 (514)
Q Consensus       336 v---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~----~~~~~~~~~~~  408 (514)
                      +   +|||.++.| +++|++++++++++.+...       ....+++.+.+++.++.++|+.-.-    ++..+.++++.
T Consensus       275 i~~~SfSK~~~~G-lRiG~~i~~~~~~~~~~~~-------~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r  346 (431)
T PRK15481        275 ALIRSVSKALGPD-LRLAFVASDSATSARLRLR-------LNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRR  346 (431)
T ss_pred             EEEeeeccccCCC-ceeEEEeCCHHHHHHHHHH-------HhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence            3   689999855 9999999999998888631       1112345678888888887753110    13456667777


Q ss_pred             HHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--------CCEEEEeC
Q 010250          409 PKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------GDNIMMSP  480 (514)
Q Consensus       409 ~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------g~~iRi~p  480 (514)
                      +.+.+.|++.   .+......-|.++++.+.+.             ...+...|.++||.+.++        +++|||+.
T Consensus       347 ~~~~~~L~~~---~~~~~~p~gg~f~~~~l~~~-------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~  410 (431)
T PRK15481        347 QKLARALQQY---GIAIPSPGDGLNLWLPLDTD-------------SQATALTLAKSGWLVREGEAFGVSAPSHGLRITL  410 (431)
T ss_pred             HHHHHHHHHc---CCccccCCCeEEEEEECCCC-------------HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEc
Confidence            7777777664   22111234577788877531             235778888999999873        14699995


Q ss_pred             CCCCCHHHHHHHHHHHHHHHH
Q 010250          481 PFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       481 ~~~~t~e~id~~~~~l~~~l~  501 (514)
                      . ..+++++++++++|.+++.
T Consensus       411 ~-~~~~~~i~~~~~~l~~~~~  430 (431)
T PRK15481        411 S-TLNDAEINRLAADLHQALN  430 (431)
T ss_pred             C-CCChHHHHHHHHHHHHHhc
Confidence            3 2578999999999998874

>PRK07683 aminotransferase A; Validated

Probab=99.82  E-value=1.8e-17  Score=171.19  Aligned_cols=337  Identities=15%  Similarity=0.116  Sum_probs=197.5

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEANDT  177 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA~~~  177 (514)
                      ..++||..|...  ++ .++.+.+++.+.++.....+....+..+....+++.+.+..+ ..+.+ ++++++|+++|+..
T Consensus        28 ~~~i~l~~~~p~--~~-~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~  104 (387)
T PRK07683         28 DNLISLTIGQPD--FP-TPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDI  104 (387)
T ss_pred             CCeEEecCCCCC--CC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHH
Confidence            457888777421  33 367889999998865321111111223333344444433322 12445 89999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRL  256 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  256 (514)
                      +++...        ..++.|++.+++|.+........ |....            .++.. ..|.             .+
T Consensus       105 ~~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~------------~~~~~~~~~~-------------~~  150 (387)
T PRK07683        105 AFRTIL--------EPGTEVILPAPIYPGYEPIIRLC-GAKPV------------FIDTRSTGFR-------------LT  150 (387)
T ss_pred             HHHHhC--------CCCCEEEEcCCCccchHHHHHHc-CCEEE------------EeecCcccCC-------------CC
Confidence            987653        23468999999998764333222 11110            01100 0000             01


Q ss_pred             HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee-cccCCCCch
Q 010250          257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKYSIKPDL  335 (514)
Q Consensus       257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~-~~~gv~pDi  335 (514)
                      .+++++.+.   + ++.++++...++.+|.+. +++.+++|.++|+++|+++|+||+|..+...+..... ...+....+
T Consensus       151 ~~~l~~~~~---~-~~~~i~i~~p~NPtG~~~-s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~v  225 (387)
T PRK07683        151 AEALENAIT---E-KTRCVVLPYPSNPTGVTL-SKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHTSIAHFPEMREKT  225 (387)
T ss_pred             HHHHHHhcC---c-CceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHcCeEEEEecccccceeCCCcCChhhccCCcCCe
Confidence            356666553   2 234444444455666544 5688999999999999999999999977332222111 111221222


Q ss_pred             h---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccHHHHHHHHHHH
Q 010250          336 V---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIAPK  410 (514)
Q Consensus       336 v---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~~~~~~~~~~~  410 (514)
                      +   +|||.++-.++++|++++++++++.+...       ......+.+.+++.++.+.|+.-.  -+...++++++.+.
T Consensus       226 i~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~  298 (387)
T PRK07683        226 IVINGLSKSHSMTGWRIGFLFAPSYLAKHILKV-------HQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDY  298 (387)
T ss_pred             EEEeeccccccCccceeEEEEcCHHHHHHHHHH-------HHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence            2   68999883338999999999998888631       111123345667777766664211  12345566777777


Q ss_pred             HHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHH-HHHCCcEEEee-------CCEEEEeCC
Q 010250          411 FQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVS-------GDNIMMSPP  481 (514)
Q Consensus       411 l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~-------g~~iRi~p~  481 (514)
                      +.+.|+++   .+ ....+. |.++++.+.....          ....+... +.++||.+.++       .+.+||+  
T Consensus       299 ~~~~l~~~---~~-~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~--  362 (387)
T PRK07683        299 VYNRLISM---GL-DVEKPTGAFYLFPSIGHFTM----------SSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLS--  362 (387)
T ss_pred             HHHHHHHc---CC-cccCCCeeEEEEEecccCCC----------CHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEE--
Confidence            77777664   11 112233 4455555542110          02235544 56789999874       2579999  


Q ss_pred             CCCCHHHHHHHHHHHHHHHH
Q 010250          482 FIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       482 ~~~t~e~id~~~~~l~~~l~  501 (514)
                      +..+++++.+++++|.+.+.
T Consensus       363 ~~~~~~~~~~al~~l~~~l~  382 (387)
T PRK07683        363 YAYSIETLKEGLDRLEAFLQ  382 (387)
T ss_pred             ecCCHHHHHHHHHHHHHHHH
Confidence            56789999999999998875

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=99.82  E-value=7.2e-18  Score=173.52  Aligned_cols=320  Identities=15%  Similarity=0.131  Sum_probs=200.6

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT  177 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~  177 (514)
                      .+..+||+..|.  +++| .+|.+.+++.+. .....|      +.....+|.+.|++++. ...++|++++|+++++..
T Consensus        50 ~~~~~i~l~~n~--~p~~-~~~~v~~a~~~~-~~~~~Y------p~~~~~~lr~~ia~~~~-~~~~~I~~t~Ga~~~i~~  118 (380)
T PLN03026         50 KPEDIVKLDANE--NPYG-PPPEVLEALGNM-KFPYVY------PDPESRRLRAALAEDSG-LESENILVGCGADELIDL  118 (380)
T ss_pred             CccceEEccCCC--CCCC-CCHHHHHHHHhh-HhhccC------CCCCHHHHHHHHHHHhC-cChhhEEEcCCHHHHHHH
Confidence            466889987764  4565 578888887542 211111      22235678889998874 456789999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      +++...        ..+++|++.+++|..+....... |...            ..++....|.             .++
T Consensus       119 ~~~~~~--------~~gd~Vlv~~P~y~~y~~~~~~~-g~~~------------~~v~~~~~~~-------------~d~  164 (380)
T PLN03026        119 LMRCVL--------DPGDKIIDCPPTFGMYVFDAAVN-GAEV------------IKVPRTPDFS-------------LDV  164 (380)
T ss_pred             HHHHhc--------CCCCEEEEcCCChHHHHHHHHHc-CCEE------------EEeecCCCCC-------------cCH
Confidence            887653        23468999999996543222111 1111            0011111111             114


Q ss_pred             HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh-
Q 010250          258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV-  336 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv-  336 (514)
                      +++++.+..   +++.+|++...++.+|.+.+    .+++.++++.. +++|+||+|..|...+...  ....-.+.++ 
T Consensus       165 ~~l~~~~~~---~~~~~v~l~~P~NPTG~~~~----~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~--~~~~~~~~viv  234 (380)
T PLN03026        165 PRIVEAVET---HKPKLLFLTSPNNPDGSIIS----DDDLLKILELP-ILVVLDEAYIEFSTQESRM--KWVKKYDNLIV  234 (380)
T ss_pred             HHHHHHHhc---cCCcEEEEeCCCCCCCCCCC----HHHHHHHHhcC-CEEEEECcchhhcCCcchH--HHHHhCCCEEE
Confidence            666666532   23455565566777787776    66777777654 8999999998774332211  1111122332 


Q ss_pred             --chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Q 010250          337 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQD  413 (514)
Q Consensus       337 --~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~  413 (514)
                        +|||.++-.++++|++++++++++.+....         ..++.+.+++.++.++|+..+ -++..+.+++.++++.+
T Consensus       235 ~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~---------~~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~  305 (380)
T PLN03026        235 LRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAK---------QPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFG  305 (380)
T ss_pred             EecchHhhcCccccceeeecCHHHHHHHHHhc---------CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence              689988733399999999999998886421         235567777888888874211 12346667777788888


Q ss_pred             hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-----CEEEEeCCCCCCHHH
Q 010250          414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMSPEE  488 (514)
Q Consensus       414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-----~~iRi~p~~~~t~e~  488 (514)
                      .|+++   +.+......|.++.+.+.+..           ....+.+.|.++||.++++.     +.+||+   ..++++
T Consensus       306 ~L~~~---~~~~~~p~~~~f~~~~~~~~~-----------~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis---~~~~~~  368 (380)
T PLN03026        306 LLKEV---PFLEPYPSDANFILCRVTSGR-----------DAKKLKEDLAKMGVMVRHYNSKELKGYIRVS---VGKPEH  368 (380)
T ss_pred             HHHHC---CCCeECCCCCeEEEEECCCCC-----------CHHHHHHHHHHCCeEEEECCCCCCCCEEEEe---cCCHHH
Confidence            88765   222222344667777664311           13457888999999998642     579999   347888


Q ss_pred             HHHHHHHHHH
Q 010250          489 VDELISKYGK  498 (514)
Q Consensus       489 id~~~~~l~~  498 (514)
                      ++++++.|++
T Consensus       369 ~~~l~~al~~  378 (380)
T PLN03026        369 TDALMEALKQ  378 (380)
T ss_pred             HHHHHHHHHH
Confidence            8998888865

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=99.82  E-value=2.1e-17  Score=172.01  Aligned_cols=350  Identities=12%  Similarity=0.063  Sum_probs=208.2

Q ss_pred             cEEEeCCCCEEEEccCCccccc--CCCCCHHHHHHHHHHHhcC--CccccccccCCchHHHHHHHHHHhcC---------
Q 010250           92 SYVYDVNGKKYLDSLAGLWCTA--LGGSEPRLVAAATAQLNTL--PFYHSFWNRTTKPSLDLAKELLEMFT---------  158 (514)
Q Consensus        92 ~~~~d~dG~~ylD~~s~~~~~~--lGh~~p~v~~A~~~~l~~~--~~~~~~~~~~~~~~~ela~~L~~~~~---------  158 (514)
                      .++.+..|+.+|||..|.....  +- .++.+.+++.+.+...  ..|..     .....+|.+.|++++.         
T Consensus        25 ~~~~~~~~~~~i~l~~g~p~~~~~~~-p~~~~~~a~~~~~~~~~~~~Y~~-----~~G~~~Lr~aia~~~~~~~~~~~~~   98 (412)
T PTZ00433         25 NAKPSPSPKSIIKLSVGDPTLDGNLL-TPAIQTKALVEAVDSQECNGYPP-----TVGSPEAREAVATYWRNSFVHKESL   98 (412)
T ss_pred             hhccCCCCCCeeecCCcCCCCcCCCC-CCHHHHHHHHHHhhcCCCCCCCC-----CCCcHHHHHHHHHHHHhhccccccc
Confidence            3455568899999998854211  22 4778999988877642  11211     1123445555555442         


Q ss_pred             --cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC
Q 010250          159 --ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC  236 (514)
Q Consensus       159 --~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~  236 (514)
                        ..+.+++++++|+++|+..+++...        ..++.|++.+++|.+........+. ..            ..++.
T Consensus        99 ~~~~~~~~i~it~G~~~al~~~~~~~~--------~~gd~vlv~~P~y~~~~~~~~~~g~-~~------------~~i~~  157 (412)
T PTZ00433         99 KSTIKKDNVVLCSGVSHAILMALTALC--------DEGDNILVPAPGFPHYETVCKAYGI-EM------------RFYNC  157 (412)
T ss_pred             cCCCChhhEEEeCChHHHHHHHHHHhc--------CCCCEEEEccCCcccHHHHHHHcCC-EE------------EEEec
Confidence              1346789999999999999998763        3356899999999876433222111 10            01111


Q ss_pred             CCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC
Q 010250          237 PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA  316 (514)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG  316 (514)
                      ...          +.+ ..+.+++++.+..    ++.+|++...++.+|.+. +.+.+++|.++|++||+++|+||++..
T Consensus       158 ~~~----------~~~-~~d~~~l~~~~~~----~~~~i~~~~p~NPtG~~~-s~~~~~~l~~~a~~~~~~ii~De~y~~  221 (412)
T PTZ00433        158 RPE----------KDW-EADLDEIRRLVDD----RTKALIMTNPSNPCGSNF-SRKHVEDIIRLCEELRLPLISDEIYAG  221 (412)
T ss_pred             Ccc----------ccC-cCCHHHHHHHhcc----CceEEEEeCCCCCCCccc-CHHHHHHHHHHHHHcCCeEEEeccccc
Confidence            000          000 0114566665532    344444433455666544 567899999999999999999999987


Q ss_pred             cccccccc-eecccCCCCchh---chhhhhcCCcccceeEEe------CHHHHHHhhhccCCCCcccccCCCCCcHHHHH
Q 010250          317 FGRLGTMF-GCDKYSIKPDLV---SFAKALSSAYMPIGAILV------SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA  386 (514)
Q Consensus       317 ~gr~G~~~-~~~~~gv~pDiv---~~sK~l~gG~~pig~v~~------~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~a  386 (514)
                      |-..+..+ ....+.-..+++   +|||.++..++++|++++      .+++++.+...        ...+++.+++++.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~--------~~~~~~~~~~~q~  293 (412)
T PTZ00433        222 MVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRL--------GMLVCGPCSVVQA  293 (412)
T ss_pred             cccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHH--------hhccCCCChHHHH
Confidence            74333221 111111111222   689988654499999997      24566666531        1123567788888


Q ss_pred             HHHHHHHHH-h--hccHHHHHHHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHH
Q 010250          387 VAIEALKIY-K--ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC  462 (514)
Q Consensus       387 aa~aal~~~-~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l  462 (514)
                      ++.++++.- +  -++..+.++++.+.+.+.|++..   .+..+.. -|.++++.++...-..      ......+++.|
T Consensus       294 a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~---~~~~~~p~gg~f~~~~l~~~~~~~------~~~~~~~~~~l  364 (412)
T PTZ00433        294 ALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECI---GLSPTMPRGSMFLMSRLDLEKFRD------IKSDVEFYEKL  364 (412)
T ss_pred             HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcccCCCeeEEEEEEechhhcCC------CCCHHHHHHHH
Confidence            777777521 1  12345566666677777776531   1222223 3667777775321000      00134577787


Q ss_pred             H-HCCcEEEeeC-----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          463 E-KHGMLVRVSG-----DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       463 ~-~~Gv~~~~~g-----~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      + ++||.+.++.     +.+|++  +...++++++++++|.++++..
T Consensus       365 l~~~gV~v~pg~~f~~~~~iRis--~~~~~e~l~~al~~l~~~~~~~  409 (412)
T PTZ00433        365 LEEENVQVLPGEIFHMPGFTRLT--ISRPVEVLREAVERIKAFCERH  409 (412)
T ss_pred             HHhcCEEEeCccccCCCCeEEEE--ecCCHHHHHHHHHHHHHHHHHh
Confidence            7 5799998753     579999  5667899999999999988654

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.82  E-value=5.8e-18  Score=175.53  Aligned_cols=329  Identities=14%  Similarity=0.110  Sum_probs=197.7

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccc-ccc---ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYH-SFW---NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAN  175 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~-~~~---~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~  175 (514)
                      ..|||..+.      |..++.+++++.+.+......+ ..+   ....+...++.+.++++++. ..+.+++++++++++
T Consensus        18 ~~yl~~~~~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~-~~~~v~~~~~~t~~l   90 (397)
T TIGR01976        18 RVFFDNPAG------TQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNA-DPPEVVFGANATSLT   90 (397)
T ss_pred             eEEecCCcc------CCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCC-CCCeEEEeCCHHHHH
Confidence            478886443      3468899999999886432110 000   11224457888999998853 334799999999998


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCccccee---eeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI---AASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEE  251 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  251 (514)
                      ..++......    . ..+++||+.++.|++....   .....|....            .++.+. .+           
T Consensus        91 ~~~~~~~~~~----~-~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~------------~~~~~~~~~-----------  142 (397)
T TIGR01976        91 FLLSRAISRR----W-GPGDEVIVTRLDHEANISPWLQAAERAGAKVK------------WARVDEATG-----------  142 (397)
T ss_pred             HHHHHHHHhc----C-CCCCEEEEcCCchHhHHHHHHHHHHhcCCEEE------------EEeccccCC-----------
Confidence            8776654211    1 2346788877766553211   1111121111            111100 00           


Q ss_pred             HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC
Q 010250          252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI  331 (514)
Q Consensus       252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv  331 (514)
                        ..+.+++++.+.    +++.+|+++.+++.+|.+.|    +++|.++|++||+++|+||+|. +|..  .  .+....
T Consensus       143 --~~~~~~l~~~i~----~~~~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~~--~--~~~~~~  207 (397)
T TIGR01976       143 --ELHPDDLASLLS----PRTRLVAVTAASNTLGSIVD----LAAITELVHAAGALVVVDAVHY-APHG--L--IDVQAT  207 (397)
T ss_pred             --CcCHHHHHHhcC----CCceEEEEeCCCCCCCccCC----HHHHHHHHHHcCCEEEEehhhh-cccc--C--CCHHHc
Confidence              012466776664    35678888888888898877    9999999999999999999986 3311  1  122223


Q ss_pred             CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCC------CcccccCCCCCcHHHHHHHHHHHHHHhhc-----
Q 010250          332 KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTL------GSFSHGFTYSGHPVSCAVAIEALKIYKER-----  398 (514)
Q Consensus       332 ~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~------~~~~~~~t~~~~pl~~aaa~aal~~~~~~-----  398 (514)
                      .+|++  +++|.++   .++|++++++++++.+.+.....      ..+. .+  ..+....++..++++.+.+.     
T Consensus       208 ~~d~~~~s~~K~~g---~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-~g--t~~~~~~~~l~~al~~~~~~g~~~~  281 (397)
T TIGR01976       208 GADFLTCSAYKFFG---PHMGILWGRPELLMNLPPYKLTFSYDTGPERFE-LG--TPQYELLAGVVAAVDYLAGLGESAN  281 (397)
T ss_pred             CCCEEEEechhhcC---CceEEEEEcHHHHhhCCCccccCccCCCcchhc-CC--CCCHHHHHHHHHHHHHHHHhCcccc
Confidence            46776  4569873   57899999999888776421100      0011 01  23344455555666665432     


Q ss_pred             ------------cHHHHHHHHHHHHHhhhhhccCCCceeE--EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH
Q 010250          399 ------------NIVEQVNKIAPKFQDGVKAFSDSPIIGE--IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK  464 (514)
Q Consensus       399 ------------~~~~~~~~~~~~l~~~L~~l~~~~~~~~--v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~  464 (514)
                                  ...++..++.++++++|+++....+...  ....+.++.+.+....            ...+.++|.+
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~l~~~L~~  349 (397)
T TIGR01976       282 GSRRERLVASFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGLP------------PQRVVRRLAD  349 (397)
T ss_pred             cchhhhhhHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCcC------------HHHHHHHHHH
Confidence                        1245556677777777766521212111  1113445555443211            3457788999


Q ss_pred             CCcEEEee----------------CCEEEEeCCCCCCHHHHHHHHHHH
Q 010250          465 HGMLVRVS----------------GDNIMMSPPFIMSPEEVDELISKY  496 (514)
Q Consensus       465 ~Gv~~~~~----------------g~~iRi~p~~~~t~e~id~~~~~l  496 (514)
                      +||.++.+                ++.||+++...+|++||+++++.|
T Consensus       350 ~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l  397 (397)
T TIGR01976       350 QGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL  397 (397)
T ss_pred             CCeEEEeCccchHHHHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence            99999853                246999999999999999998864

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=99.81  E-value=1.8e-17  Score=168.91  Aligned_cols=317  Identities=14%  Similarity=0.136  Sum_probs=198.6

Q ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHH
Q 010250          102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKL  181 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~  181 (514)
                      .+|+..|.  +.++ .+|.+++++.+.+......    ..+.....++.+.++++++ ...++|++++++++++..+++.
T Consensus        24 ~~~l~~~~--~~~~-~p~~~~~a~~~~~~~~~~~----~y~~~~~~~lr~~ia~~~~-~~~~~i~it~G~~~~l~~~~~~   95 (351)
T PRK14807         24 KYKMDANE--TPFE-LPEEVIKNIQEIVKSSQVN----IYPDPTAEKLREELARYCS-VVPTNIFVGNGSDEIIHLIMLA   95 (351)
T ss_pred             eeEccCCC--CCCC-CCHHHHHHHHHHhhcCccc----CCCCccHHHHHHHHHHHhC-CCcccEEEecCHHHHHHHHHHH
Confidence            36666553  3444 5789999998877532111    1122334678888988873 3457899999999999988876


Q ss_pred             HHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHH
Q 010250          182 VWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE  261 (514)
Q Consensus       182 a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le  261 (514)
                      ..        ..+++|++.+++|.+....... .|....            .++..+.|+             .+.++++
T Consensus        96 l~--------~~gd~Vlv~~p~y~~~~~~~~~-~g~~~~------------~v~~~~~~~-------------~d~~~l~  141 (351)
T PRK14807         96 FI--------NKGDVVIYPHPSFAMYSVYSKI-AGAVEI------------PVKLKEDYT-------------YDVGSFI  141 (351)
T ss_pred             hc--------CCCCEEEEeCCChHHHHHHHHH-cCCeEE------------EeecCCCCC-------------CCHHHHH
Confidence            53        3357899999999865432222 121110            111111111             1146677


Q ss_pred             HHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh---ch
Q 010250          262 DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV---SF  338 (514)
Q Consensus       262 ~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv---~~  338 (514)
                      +.+..   .++.++++...++.+|.+.+    .+++.++|++++.++|+||+|.+|.  +.... ....-.+.++   +|
T Consensus       142 ~~~~~---~~~k~v~l~~p~NPtG~~~~----~~~l~~l~~~~~~~~ivDe~y~~~~--~~~~~-~~~~~~~~vi~~~S~  211 (351)
T PRK14807        142 KVIEK---YQPKLVFLCNPNNPTGSVIE----REDIIKIIEKSRGIVVVDEAYFEFY--GNTIV-DVINEFENLIVLRTL  211 (351)
T ss_pred             HHhhc---cCCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCCEEEEeCcchhhc--ccchH-HHhhhCCCEEEEecc
Confidence            66642   24455555556777787776    6888889999889999999998762  32111 1111112333   68


Q ss_pred             hhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhh
Q 010250          339 AKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA  417 (514)
Q Consensus       339 sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~  417 (514)
                      ||.++ .| +++|++++++++++.+....         ..+..+++++.++.+.|+.-.-++..+.++++.+.+.+.|++
T Consensus       212 SK~~~~~G-lRiG~~v~~~~~~~~~~~~~---------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~  281 (351)
T PRK14807        212 SKAFGLAG-LRVGYAVANENILKYLNLVK---------SPYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSK  281 (351)
T ss_pred             hHhcccch-hceeeeecCHHHHHHHHHcc---------CCCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            99887 45 89999999999999886421         124456777777777775321123345566666777777765


Q ss_pred             ccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC------CEEEEeCCCCCCHHHHHH
Q 010250          418 FSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------DNIMMSPPFIMSPEEVDE  491 (514)
Q Consensus       418 l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g------~~iRi~p~~~~t~e~id~  491 (514)
                      +..   +......|.++++.+.+              ...+.+.|.++||.+.+.+      +.+||+   ..+.++.++
T Consensus       282 ~~g---~~~~~~~~~~~~i~~~~--------------~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis---~~~~~~~~~  341 (351)
T PRK14807        282 IPG---IKVYPSKTNFILVKFKD--------------ADYVYQGLLERGILVRDFSKVEGLEGALRIT---VSSCEANDY  341 (351)
T ss_pred             CCC---cEECcCCccEEEEEcCC--------------HHHHHHHHHHCCEEEEECCCCCCCCCeEEEE---cCCHHHHHH
Confidence            422   22233456677776642              3457788999999997642      469999   346788888


Q ss_pred             HHHHHHHHH
Q 010250          492 LISKYGKAL  500 (514)
Q Consensus       492 ~~~~l~~~l  500 (514)
                      +++.|++++
T Consensus       342 l~~~l~~~~  350 (351)
T PRK14807        342 LINGLKELL  350 (351)
T ss_pred             HHHHHHHhh
Confidence            888887653

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=99.81  E-value=1.2e-17  Score=172.30  Aligned_cols=337  Identities=12%  Similarity=0.095  Sum_probs=198.1

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcCc-CCCC-eEEEeCChhHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTA-SKMA-KVFFTNSGSEA  174 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~~-~~~~-~v~~~~sGseA  174 (514)
                      .|..++||.+|.  ..++ .++.+.+++.+.+..... .++...+..+....+++.+.+.++. ...+ .++++++++++
T Consensus        27 ~~~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~  103 (383)
T TIGR03540        27 EGVDVISLGIGD--PDLP-TPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEG  103 (383)
T ss_pred             cCCCeEEeCCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHH
Confidence            366788988774  2345 377899999887754211 1111111223334444444433221 1234 68899999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      +..+++...        ..++.|++.+++|.+........+.. .            ..++....          ..+ .
T Consensus       104 l~~~~~~~~--------~~gd~vlv~~P~y~~~~~~~~~~G~~-v------------~~v~~~~~----------~g~-~  151 (383)
T TIGR03540       104 IAHIPLAFV--------NPGDIVLVPDPGYPVYRIGTLFAGGE-P------------YEMPLKEE----------NGF-L  151 (383)
T ss_pred             HHHHHHHhC--------CCCCEEEEeCCCCcchHHHHHhcCCE-E------------EEEecCcc----------cCC-c
Confidence            999988653        34568999999998865433322221 1            00111000          000 0


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-ee-cccCCC
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC-DKYSIK  332 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~-~~~gv~  332 (514)
                      .+++++++.+.    +++.+|++...++.+|.+ .+.+.+++|.++|++||+++|+||+|..+...+... .. ...+..
T Consensus       152 ~d~~~l~~~~~----~~~~~v~i~~P~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~  226 (383)
T TIGR03540       152 PDFDAIPEDIA----KKAKLMFINYPNNPTGAV-APLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAK  226 (383)
T ss_pred             cCHHHHHhhcc----ccceEEEEeCCCCCcCcc-CCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcc
Confidence            11355655543    234455555335667755 467889999999999999999999998664333211 11 111111


Q ss_pred             ---CchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHH
Q 010250          333 ---PDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKI  407 (514)
Q Consensus       333 ---pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~  407 (514)
                         ..+-+|||.++-.++++|++++++++++.+...       ......+.+.+.+.++.++|+...+  +++.+.++++
T Consensus       227 ~~~i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~  299 (383)
T TIGR03540       227 DVGIEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKV-------KTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRR  299 (383)
T ss_pred             cCEEEEEecccccCCccceeeEEeCCHHHHHHHHHH-------HHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence               223479998864338999999999998887642       1112233445566666666643211  2345667777


Q ss_pred             HHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEE
Q 010250          408 APKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMM  478 (514)
Q Consensus       408 ~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi  478 (514)
                      .+.+.+.|++.   .+ ..... .|.++++.+.+..           ....+...|+ ++||.+.++       .+.+||
T Consensus       300 ~~~~~~~L~~~---~~-~~~~~~~~~~~~~~l~~~~-----------~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ri  364 (383)
T TIGR03540       300 RDLLLEALKKI---GI-DVEKPKATFYVWVPVPEGY-----------TSAEFAARLLEETGVVVTPGVGFGEYGEGYIRI  364 (383)
T ss_pred             HHHHHHHHHhC---CC-EecCCCcceEEEEECCCCC-----------CHHHHHHHHHHHCCEEEecchhhCccCCCeEEE
Confidence            77788877765   22 11222 3556777765321           1345777765 689999864       246999


Q ss_pred             eCCCCCCHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~  498 (514)
                      +  +..+++++.+++++|.+
T Consensus       365 s--~~~~~~~l~~~l~~l~~  382 (383)
T TIGR03540       365 S--LTVPDERLEEAVARIKK  382 (383)
T ss_pred             E--ecCCHHHHHHHHHHHhh
Confidence            9  56788888888887753

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK06107 aspartate aminotransferase; Provisional

Probab=99.81  E-value=1.9e-17  Score=171.78  Aligned_cols=351  Identities=13%  Similarity=0.078  Sum_probs=208.0

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCCeEEEeCChhHHHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDT  177 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~~v~~~~sGseA~~~  177 (514)
                      |...+|+..|..  .++ .+|.+.+++.+.+++....+....+..+....+++.+.+.++. ...+++++++++++|+..
T Consensus        32 ~~~~i~l~~g~p--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~  108 (402)
T PRK06107         32 GRSIVDLTVGEP--DFD-TPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFL  108 (402)
T ss_pred             cCCEEEcCCCCC--CCC-CCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHH
Confidence            556788877753  233 3788999999888643221121123445556667777665432 245789999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      +++...        ..++.|++.+++|.++........+...             .++++...          .+ ..+.
T Consensus       109 ~~~~~~--------~~gd~vl~~~p~y~~y~~~~~~~~~~~~-------------~v~~~~~~----------~~-~~~~  156 (402)
T PRK06107        109 ALMATL--------EAGDEVIIPAPYWVSYPDMVLANDGTPV-------------IVACPEEQ----------GF-KLTP  156 (402)
T ss_pred             HHHHhc--------CCCCEEEEecCCCcCHHHHHHHcCCEEE-------------EecCCccc----------CC-CCCH
Confidence            987542        3356788989988766322221111110             11111000          00 0113


Q ss_pred             HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc-CCEEEEechhcCcccccccce-e-cc-cCCCC
Q 010250          258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY-DILFIADEVICAFGRLGTMFG-C-DK-YSIKP  333 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~-gillI~DEv~tG~gr~G~~~~-~-~~-~gv~p  333 (514)
                      +++++.+.   ++..+.+++.| ++.+|. ..+.+.+++|.++|++| |+++|+||+|..+...+..+. . .. .+...
T Consensus       157 ~~l~~~~~---~~~~~v~l~~p-~NPtG~-~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~  231 (402)
T PRK06107        157 EALEAAIT---PRTRWLILNAP-SNPTGA-VYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRD  231 (402)
T ss_pred             HHHHhhcC---cCceEEEEECC-CCCCCc-CcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccC
Confidence            56666553   23345555556 455564 44668899999999998 999999999986644332211 1 11 11222


Q ss_pred             chh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccHHHHHHHHH
Q 010250          334 DLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQVNKIA  408 (514)
Q Consensus       334 Div---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~~~~~~~~~  408 (514)
                      .++   +|||.++..++++|++++++++++.+...       ....+++.+.+++.++..+|+.-.  -++..+.++++.
T Consensus       232 ~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~-------~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~  304 (402)
T PRK06107        232 RVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINKL-------QSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRR  304 (402)
T ss_pred             CEEEEeccchhhcCcccceeeeecCHHHHHHHHHH-------HHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHH
Confidence            343   57899873338999999999999888742       222345667788888877774111  023345566667


Q ss_pred             HHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCcc--chHHHHHHH-HHHCCcEEEeeC-----CEEEEe
Q 010250          409 PKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEW--GIGAYFGAQ-CEKHGMLVRVSG-----DNIMMS  479 (514)
Q Consensus       409 ~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~-l~~~Gv~~~~~g-----~~iRi~  479 (514)
                      +.+.+.|+++..   +..... -|.++++.+.......  .+..+  .....+... +.++||.+.++.     +++||+
T Consensus       305 ~~~~~~L~~~~g---~~~~~p~gg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis  379 (402)
T PRK06107        305 DYALALLNAIPG---LSCLVPDGAFYLYVNCAGLIGKT--TPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLS  379 (402)
T ss_pred             HHHHHHHhcCCC---CcccCCCcceEEeeecccccccc--cccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEE
Confidence            777777765422   222222 3555666663210000  00000  012335544 457899998762     579999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                        +..++|++++++++|.+.++++
T Consensus       380 --~~~~~e~l~~~l~~l~~~l~~~  401 (402)
T PRK06107        380 --IATSLETLEEACARIERAVAAL  401 (402)
T ss_pred             --eCCCHHHHHHHHHHHHHHHHhc
Confidence              6678999999999999988764

>PRK05942 aspartate aminotransferase; Provisional

Probab=99.81  E-value=1.4e-17  Score=172.44  Aligned_cols=337  Identities=12%  Similarity=0.100  Sum_probs=194.5

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEA  174 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA  174 (514)
                      .|+.++||..+   ++.+..++++.+++.+.+.... ..+....+..+....+++.+...++ ....+ .+++++|+++|
T Consensus        33 ~g~~~i~l~~g---~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~a  109 (394)
T PRK05942         33 QGLDLIDLGMG---NPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEG  109 (394)
T ss_pred             cCCCeEEcCCC---CCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHH
Confidence            36668999876   4444456678888877775321 1111111122333444444443322 12345 58899999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      +..++....        ..+++|++.+++|.+........ |...            ..++....          +.+ .
T Consensus       110 l~~~~~~~~--------~~gd~Vlv~~P~y~~~~~~~~~~-g~~~------------~~v~~~~~----------~~~-~  157 (394)
T PRK05942        110 LTHLALAYV--------NPGDVVLVPSPAYPAHFRGPLIA-GAQI------------YPIILKPE----------NDW-L  157 (394)
T ss_pred             HHHHHHHhC--------CCCCEEEEcCCCCcchHHHHHHc-CCEE------------EEeecCCc----------cCC-c
Confidence            999887653        34578999999998764322221 1111            00111000          000 0


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-cee-cc---c
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGC-DK---Y  329 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~-~~---~  329 (514)
                      .+.+++++.+.    +++.++++...++.+|.+ .+++.+++|.++|++||+++|+||+|..|...+.. ... ..   .
T Consensus       158 ~d~~~l~~~~~----~~~k~i~l~~P~NPtG~~-~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~  232 (394)
T PRK05942        158 IDLSSIPEEVA----QQAKILYFNYPSNPTTAT-APREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAK  232 (394)
T ss_pred             cCHHHHHHhcc----ccceEEEEcCCCCCCCCc-CCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCcc
Confidence            12456665553    244555555335666655 46788999999999999999999999866433321 111 11   1


Q ss_pred             CCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHH
Q 010250          330 SIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKI  407 (514)
Q Consensus       330 gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~  407 (514)
                      +....+-+|||.++.+++++|++++++++++.+...       .....++.+.+++.++.++|+..++  ++..++++++
T Consensus       233 ~~~i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~  305 (394)
T PRK05942        233 DIGVEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRTL-------KTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTR  305 (394)
T ss_pred             ccEEEEecchhccCChhhheeeeecCHHHHHHHHHH-------HhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence            111223478998864348999999999999888742       1112344555666667777753221  2456667777


Q ss_pred             HHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHH-HHHHCCcEEEee-------CCEEEE
Q 010250          408 APKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGA-QCEKHGMLVRVS-------GDNIMM  478 (514)
Q Consensus       408 ~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~Gv~~~~~-------g~~iRi  478 (514)
                      .+.+.+.|+++ ...   ...+ -|.++++.+.....           ...+.. .+.++||.+.++       .++||+
T Consensus       306 ~~~~~~~L~~~-~~~---~~~~~~~~f~~~~~~~~~~-----------~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRi  370 (394)
T PRK05942        306 RDFLIQGLGEL-GWN---IPPTKATMYLWVPCPVGMG-----------STDFALNVLQKTGVVVTPGNAFGEGGEGYVRI  370 (394)
T ss_pred             HHHHHHHHHHC-CCe---ecCCCeeeEEEEECCCCCC-----------HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEE
Confidence            77888877764 211   1223 34567777653210           223444 455789999763       257999


Q ss_pred             eCCCCCCHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~  498 (514)
                      +.  ..+.+.+.+++++|.+
T Consensus       371 s~--~~~~~~l~~~l~~l~~  388 (394)
T PRK05942        371 SL--IADCDRLGEALDRLKQ  388 (394)
T ss_pred             Ee--cCCHHHHHHHHHHHHH
Confidence            95  3455666666666543

>PRK09105 putative aminotransferase; Provisional

Probab=99.81  E-value=7.3e-18  Score=172.82  Aligned_cols=318  Identities=15%  Similarity=0.097  Sum_probs=196.9

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV  179 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al  179 (514)
                      +.++|+..|.  ++++ .+|.+.+++.+.+.....|      +.....+|.+.|++.++ ...++|++++|+++++..++
T Consensus        43 ~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~Y------~~~~~~~Lr~aia~~~~-v~~e~I~it~Gs~~ai~~~~  112 (370)
T PRK09105         43 EGAVFLNANE--CPLG-PSPAARDAAARSAALSGRY------DLELEDDLRTLFAAQEG-LPADHVMAYAGSSEPLNYAV  112 (370)
T ss_pred             CCcEEecCCC--CCCC-CCHHHHHHHHHHHHHhcCC------CCchHHHHHHHHHHHhC-cChhhEEEcCChHHHHHHHH
Confidence            4455655552  3455 5889999998877543222      11225678888888874 46789999999999999998


Q ss_pred             HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250          180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN  259 (514)
Q Consensus       180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (514)
                      ....        ..+++|++.+++|.+....+... |...            ..++....|.             .+.++
T Consensus       113 ~~l~--------~~gd~Vli~~P~y~~~~~~~~~~-g~~~------------~~v~~~~~~~-------------~d~~~  158 (370)
T PRK09105        113 LAFT--------SPTAGLVTADPTYEAGWRAADAQ-GAPV------------AKVPLRADGA-------------HDVKA  158 (370)
T ss_pred             HHHc--------CCCCEEEEeCCChHHHHHHHHHc-CCeE------------EEecCCCCCC-------------CCHHH
Confidence            7663        33568999999998764332222 1111            0111111010             01244


Q ss_pred             HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh---
Q 010250          260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV---  336 (514)
Q Consensus       260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv---  336 (514)
                      +++.    .++....+++.| ++.+|.+. +.+.++++.+.|+ +|+++|+||+|..|+..  ....+..+..++++   
T Consensus       159 l~~~----~~~~~~v~l~nP-~NPTG~~~-~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~~--~s~~~~~~~~~~vi~~~  229 (370)
T PRK09105        159 MLAA----DPNAGLIYICNP-NNPTGTVT-PRADIEWLLANKP-AGSVLLVDEAYIHFSDA--PSVVDLVAQRKDLIVLR  229 (370)
T ss_pred             HHhc----CCCCCEEEEeCC-CCCCCcCc-CHHHHHHHHHhCC-CCcEEEEECchHHhccC--cchHHHHhhCCCEEEEe
Confidence            4332    223344556666 55666654 5567777777654 59999999999766431  11112222234544   


Q ss_pred             chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhhh
Q 010250          337 SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDGV  415 (514)
Q Consensus       337 ~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L  415 (514)
                      +|||.++..++++|++++++++++.+...          ..+..+..++.++.++|+.-+ -+...++++++.+++.+.|
T Consensus       230 SfSK~~g~~GlRiG~~v~~~~~i~~l~~~----------~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L  299 (370)
T PRK09105        230 TFSKLYGMAGMRLGLAAARPDLLAKLARF----------GHNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWL  299 (370)
T ss_pred             cccHhhcCCccceeeeecCHHHHHHHHhc----------CCCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence            68998875449999999999999888631          233456666777777775211 1234566777777788877


Q ss_pred             hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe----eCCEEEEeCCCCCCHHHHHH
Q 010250          416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV----SGDNIMMSPPFIMSPEEVDE  491 (514)
Q Consensus       416 ~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~----~g~~iRi~p~~~~t~e~id~  491 (514)
                      +++ +..+   ....|.++.+.+..             ....+.+.|.++||.+..    ..+++|++   ..+++++++
T Consensus       300 ~~~-g~~~---~~~~~~f~~~~~~~-------------~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris---~~~~~~~~~  359 (370)
T PRK09105        300 KKK-GYKC---TPSQANCFMVDVKR-------------PAKAVADAMAKQGVFIGRSWPIWPNWVRVT---VGSEEEMAA  359 (370)
T ss_pred             HHC-CCCc---CCCCCcEEEEeCCC-------------CHHHHHHHHHHCCcEEecCCCCCCCeEEEE---cCCHHHHHH
Confidence            765 2221   23445555555421             134588899999999842    13579999   347888999


Q ss_pred             HHHHHHHHH
Q 010250          492 LISKYGKAL  500 (514)
Q Consensus       492 ~~~~l~~~l  500 (514)
                      +++.|++.+
T Consensus       360 l~~al~~~~  368 (370)
T PRK09105        360 FRSAFAKVM  368 (370)
T ss_pred             HHHHHHHHh
Confidence            998887764

>PRK07337 aminotransferase; Validated

Probab=99.81  E-value=1.7e-17  Score=171.47  Aligned_cols=341  Identities=13%  Similarity=0.120  Sum_probs=201.4

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDT  177 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~~  177 (514)
                      |..++||..+..  .++ .+|.+.+++.+.+......+....+..+....+++.+...++ ....+++++++++++|+..
T Consensus        29 ~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~  105 (388)
T PRK07337         29 GRDIIHMGIGEP--DFT-APEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLL  105 (388)
T ss_pred             CCCEEEeCCcCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHH
Confidence            345677766632  233 368899999887754211111111122333344444433322 1345789999999999988


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  255 (514)
                      ++....        ..++.|++.+++|.+........+....             .++..  ..|.             .
T Consensus       106 ~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~g~~~~-------------~~~~~~~~~~~-------------~  151 (388)
T PRK07337        106 ACLALV--------ERGDEVLMPDPSYPCNRHFVAAAEGRPV-------------LVPSGPAERFQ-------------L  151 (388)
T ss_pred             HHHHhc--------CCCCEEEEeCCCchhhHHHHHHcCCEEE-------------EeecCCccCCc-------------C
Confidence            887653        3357899999999876322222111110             01110  0011             1


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL  335 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi  335 (514)
                      +.+++++.+.   ++..+.++..|. +.+|.+. +.+.+++|.++|++||+++|+||++.+|...+....  .....+++
T Consensus       152 ~~~~l~~~~~---~~~~~v~l~~p~-NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~--~~~~~~~v  224 (388)
T PRK07337        152 TAADVEAAWG---ERTRGVLLASPS-NPTGTSI-APDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVS--ALSLGDDV  224 (388)
T ss_pred             CHHHHHhhcC---ccceEEEEECCC-CCCCcCc-CHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcC--hhhccCCE
Confidence            1456666553   344555666664 5556544 567899999999999999999999988755443111  11233455


Q ss_pred             h---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH--Hh-hccHHHHHHHHHH
Q 010250          336 V---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI--YK-ERNIVEQVNKIAP  409 (514)
Q Consensus       336 v---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~--~~-~~~~~~~~~~~~~  409 (514)
                      +   +|||.++..++++|++++++++++.+...       ......+.+.+++.++.++++.  +. -++..+.++++.+
T Consensus       225 i~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~-------~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~  297 (388)
T PRK07337        225 ITINSFSKYFNMTGWRLGWLVVPEALVGTFEKL-------AQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRD  297 (388)
T ss_pred             EEEEechhhcCCchhheeeeecCHHHHHHHHHH-------HHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHH
Confidence            4   67998864338999999999998887631       1112334566777776666641  11 1234556667777


Q ss_pred             HHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHH-HHHCCcEEEee--------CCEEEEeC
Q 010250          410 KFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVS--------GDNIMMSP  480 (514)
Q Consensus       410 ~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~--------g~~iRi~p  480 (514)
                      .+.+.|+++ ..... ....-|.++++++.....+.     .. ....++.. +.++||.+.++        .+.+|++ 
T Consensus       298 ~~~~~L~~~-~~~~~-~~p~~g~f~~~~~~~~~~~~-----~~-~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~-  368 (388)
T PRK07337        298 FIVPALESL-GFKVP-VMPDGAFYVYADCRGVAHPA-----AG-DSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLS-  368 (388)
T ss_pred             HHHHHHHhc-CCccc-cCCCeeEEEEEecccccCCC-----CC-CHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEE-
Confidence            777777764 21111 11234778888886421000     00 13446655 45789999753        2479999 


Q ss_pred             CCCCCHHHHHHHHHHHHHHH
Q 010250          481 PFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       481 ~~~~t~e~id~~~~~l~~~l  500 (514)
                       +..+++++.+++++|.+++
T Consensus       369 -~~~~~~~l~~~l~rl~~~l  387 (388)
T PRK07337        369 -YATSMSRLEEAVARLGKLF  387 (388)
T ss_pred             -ecCCHHHHHHHHHHHHHHh
Confidence             5568999999999998764

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=99.81  E-value=8.3e-18  Score=172.28  Aligned_cols=321  Identities=14%  Similarity=0.055  Sum_probs=194.9

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC--cCCCCeEEEeCChhHHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT--ASKMAKVFFTNSGSEAN  175 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~--~~~~~~v~~~~sGseA~  175 (514)
                      ++..++||..+.   +....+|.+.+++.+..+.. .|. ...+..+....+++.+.+..+  +...+++++++++++++
T Consensus        25 ~~~~~i~l~~~~---p~~~~~~~~~~~~~~~~~~~-~Y~-~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i   99 (364)
T PRK07865         25 HPDGIVDLSVGT---PVDPVPPVIQEALAAAADAP-GYP-TTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELV   99 (364)
T ss_pred             cCCCEEEcCCCC---CCCCCCHHHHHHHHHHHhhC-CCC-CccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHH
Confidence            445678988773   33444688888887655432 221 112233444556666655433  14467999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      ..++.+..      . ..++.|++.+++|.+........ |....              .++.                 
T Consensus       100 ~~~~~~l~------~-~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~--------------~~~~-----------------  140 (364)
T PRK07865        100 AWLPTLLG------L-GPGDVVVIPELAYPTYEVGARLA-GATVV--------------RADS-----------------  140 (364)
T ss_pred             HHHHHHHc------C-CCCCEEEECCCCcccHHHHHHhc-CCEEE--------------ecCC-----------------
Confidence            88766541      1 23468999999997753222211 11110              0000                 


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecc--cCCC
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDK--YSIK  332 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~--~gv~  332 (514)
                       .++++.       .++.+|+++..++++|.+. +.+.+++|.++|++||+++|.||+|..+...+.... ...  .+..
T Consensus       141 -~~~l~~-------~~~~~v~~~~p~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~  211 (364)
T PRK07865        141 -LTELGP-------QRPALIWLNSPSNPTGRVL-GVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGD  211 (364)
T ss_pred             -hhhCCc-------ccceEEEEcCCCCCCCccC-CHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCc
Confidence             122211       3456666666677777665 457899999999999999999999997754443211 111  0111


Q ss_pred             -Cchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHH
Q 010250          333 -PDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKI  407 (514)
Q Consensus       333 -pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~  407 (514)
                       +.++   +|||.++..++++|++++++++++.+...       ....+++.+++.+.++.++|+..+ .++..+.++++
T Consensus       212 ~~~~i~~~S~SK~~~~~GlRiG~i~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~  284 (364)
T PRK07865        212 HTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAELLEV-------RKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARR  284 (364)
T ss_pred             cceEEEEeechhccCCCceeeEEEecCHHHHHHHHHH-------HHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence             1222   68998854338999999999998887631       111234556777777766664311 12345566677


Q ss_pred             HHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------CCEEEEe
Q 010250          408 APKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMS  479 (514)
Q Consensus       408 ~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g~~iRi~  479 (514)
                      .+.+.+.|++.   ++. ...+. |.++++.+..+             ...+.+.|.++||++.++       .+++||+
T Consensus       285 ~~~l~~~L~~~---g~~-~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~  347 (364)
T PRK07865        285 RAVLRPALEAA---GFR-VDHSEAGLYLWATRGED-------------CWDTVAWLAERGILVAPGDFYGPAGAQHVRVA  347 (364)
T ss_pred             HHHHHHHHHHc---CCc-ccCCCccEEEEEeCCCC-------------HHHHHHHHHHCCEEEeCccccCcCCCCEEEEE
Confidence            77777777664   211 11223 44555654211             234678889999999863       2469999


Q ss_pred             CCCCCCHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYG  497 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~  497 (514)
                        +..+++++++++++|.
T Consensus       348 --~~~~~~~~~~~~~~l~  363 (364)
T PRK07865        348 --LTATDERIAAAVERLA  363 (364)
T ss_pred             --ecCCHHHHHHHHHHhh
Confidence              5568999999999875

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=99.81  E-value=1.5e-17  Score=171.68  Aligned_cols=336  Identities=11%  Similarity=0.084  Sum_probs=194.9

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcCc-CCCC-eEEEeCChhHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFTA-SKMA-KVFFTNSGSEAN  175 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~-~v~~~~sGseA~  175 (514)
                      |..++|+..|..  .++ .+|.+.+++.+.+.... ..+....+..+....+++.+.+.++. ...+ .+++++|+++++
T Consensus        30 ~~~~i~l~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i  106 (385)
T PRK09276         30 GVDVISLGIGDP--DLP-TPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGI  106 (385)
T ss_pred             CCCEEEecCCCC--CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHH
Confidence            556788887732  243 46789999988875421 11111111223333444444433221 2334 588899999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      ..+++...        ..++.|++.+++|.+........+. ...            .++....          +.+. .
T Consensus       107 ~~~~~~~~--------~~gd~Vl~~~P~y~~~~~~~~~~g~-~~~------------~v~~~~~----------~g~~-~  154 (385)
T PRK09276        107 AHIPLAFV--------NPGDVVLVPDPGYPVYKIGTIFAGG-EPY------------FMPLKEE----------NGFL-P  154 (385)
T ss_pred             HHHHHHhC--------CCCCEEEEcCCCCcChHHHHHHcCC-EEE------------EEecCCC----------CCCc-C
Confidence            99887663        3457899999999876433222211 110            0111000          0000 0


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-e-ecccC---
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-G-CDKYS---  330 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~-~~~~g---  330 (514)
                      +++++++.+.    +++.+|++...++.+|.+. +.+.+++|.++|++||+++|+||+|..|...|... . ....+   
T Consensus       155 d~~~l~~~~~----~~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~  229 (385)
T PRK09276        155 DLDAIPEDVA----KKAKLMFINYPNNPTGAVA-DLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKD  229 (385)
T ss_pred             CHHHHHHhcc----ccceEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcC
Confidence            1345554443    2344555554456667654 67889999999999999999999998764333211 1 11111   


Q ss_pred             CCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHH
Q 010250          331 IKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIA  408 (514)
Q Consensus       331 v~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~  408 (514)
                      ....+-+|||.++..++++|++++++++++.+....       .....+.+++...++.++|+..++  ++..+.++++.
T Consensus       230 ~~i~~~S~SK~~g~~GlRiG~~i~~~~l~~~~~~~~-------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~  302 (385)
T PRK09276        230 VGIEFHSLSKTYNMTGWRIGFAVGNADLIAGLGKVK-------SNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERR  302 (385)
T ss_pred             CEEEEecchhhcCCcchhheeeeCCHHHHHHHHHHH-------hhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence            112234799988643389999999999998886421       111223445566666666642111  23455667777


Q ss_pred             HHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEEe
Q 010250          409 PKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMMS  479 (514)
Q Consensus       409 ~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi~  479 (514)
                      +.+.+.|+++ ...+   ... -|.++++.+.+..           ....+...|+ ++||.+.++       .+.+||+
T Consensus       303 ~~l~~~L~~~-~~~~---~~~~~~~~~~v~~~~~~-----------~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris  367 (385)
T PRK09276        303 DILVEGLRKL-GLEV---EPPKATFYVWAPVPKGY-----------TSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIA  367 (385)
T ss_pred             HHHHHHHHhC-CCcc---cCCCcceEEEEECCCCC-----------CHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEE
Confidence            7777777765 2221   122 2455677765321           1345677776 579999875       2479999


Q ss_pred             CCCCCCHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~  498 (514)
                        +..+++++.+++++|.+
T Consensus       368 --~~~~~~~l~~~l~~l~~  384 (385)
T PRK09276        368 --LTVPDERIEEAVERIKK  384 (385)
T ss_pred             --eCCCHHHHHHHHHHHhh
Confidence              55788888888888753

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=99.81  E-value=7.6e-18  Score=171.87  Aligned_cols=319  Identities=16%  Similarity=0.209  Sum_probs=197.7

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhc-CCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNT-LPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT  177 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~-~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~  177 (514)
                      ++.+|||.+|.  +.++ .+|.+.+++.+.+.. ...|      +.....+|.+.+++++. .+.++|++++|+++|+..
T Consensus        23 ~~~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~~y------~~~~~~~lr~aia~~~~-~~~~~I~it~G~~~al~~   92 (353)
T PRK05387         23 LAKLIKLNTNE--NPYP-PSPKVLEAIRAALGDDLRLY------PDPNADALRQAIAAYYG-LDPEQVFVGNGSDEVLAH   92 (353)
T ss_pred             ccceeeccCCC--CCCC-CCHHHHHHHHHHhhhhhhcC------CCCcHHHHHHHHHHHhC-CCHHHEEEcCCHHHHHHH
Confidence            35689998775  3455 378899999887754 2212      22233678888888874 456899999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      +++...        ..++.|++.+++|......... .|...            ..++....|..             ++
T Consensus        93 ~~~~l~--------~~gd~vlv~~P~y~~~~~~~~~-~g~~~------------~~v~~~~~~~~-------------d~  138 (353)
T PRK05387         93 AFLAFF--------NHDRPLLFPDITYSFYPVYAGL-YGIPY------------EEIPLDDDFSI-------------DV  138 (353)
T ss_pred             HHHHhc--------CCCCEEEEeCCCHHHHHHHHHH-cCCEE------------EEeecCCCCCC-------------CH
Confidence            998764        3457899999998654322111 11111            11111111110             12


Q ss_pred             HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc-CCEEEEechhcCcccccccceecccCCCCc-h
Q 010250          258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY-DILFIADEVICAFGRLGTMFGCDKYSIKPD-L  335 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~-gillI~DEv~tG~gr~G~~~~~~~~gv~pD-i  335 (514)
                      +++++       .....+++.| ++.+|.+.+    .+++.++++++ |+++|+||+|..|+.  ... .......+. +
T Consensus       139 ~~l~~-------~~~~v~~~~P-~NPtG~~~~----~~~~~~l~~~~~~~~livDe~y~~~~~--~~~-~~~~~~~~~~i  203 (353)
T PRK05387        139 EDYLR-------PNGGIIFPNP-NAPTGIALP----LAEIERILAANPDSVVVIDEAYVDFGG--ESA-IPLIDRYPNLL  203 (353)
T ss_pred             HHHHh-------cCCEEEEeCC-CCCCCCCCC----HHHHHHHHHhCCCcEEEEeCcccccCC--cch-HHHHhhCCCEE
Confidence            33331       1234566666 666676665    55666666654 999999999987742  111 111111222 2


Q ss_pred             h--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHH
Q 010250          336 V--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQ  412 (514)
Q Consensus       336 v--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~  412 (514)
                      +  +|||.++-.++++|++++++++++.+....      ....+++.+.+++.++.++++..+ -++..++++++.+.+.
T Consensus       204 ~~~S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~  277 (353)
T PRK05387        204 VVQTFSKSRSLAGLRVGFAIGHPELIEALNRVK------NSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLV  277 (353)
T ss_pred             EEEehhHhhcchhhhceeeecCHHHHHHHHHhh------ccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence            2  589988732289999999999998886421      111245667788887777775211 1245667777778888


Q ss_pred             hhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-----CEEEEeCCCCCCHH
Q 010250          413 DGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMSPE  487 (514)
Q Consensus       413 ~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-----~~iRi~p~~~~t~e  487 (514)
                      +.|+++   ++ ......|.++.+.+...            ....+.+.|.++||.+...+     +.+||+.   .+++
T Consensus       278 ~~L~~~---g~-~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~---~~~~  338 (353)
T PRK05387        278 EELEAL---GF-EVLPSKANFVFARHPSH------------DAAELAAKLRERGIIVRHFNKPRIDQFLRITI---GTDE  338 (353)
T ss_pred             HHHHHC---CC-eECCCcCcEEEEECCCC------------CHHHHHHHHHHCCEEEEECCCCCCCCeEEEEe---CCHH
Confidence            888765   22 11223355555554321            14567888999999997542     4699993   3789


Q ss_pred             HHHHHHHHHHHHHH
Q 010250          488 EVDELISKYGKALK  501 (514)
Q Consensus       488 ~id~~~~~l~~~l~  501 (514)
                      ++++++++|++++.
T Consensus       339 ~~~~~~~~L~~~~~  352 (353)
T PRK05387        339 EMEALVDALKEILA  352 (353)
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999988764

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=99.81  E-value=2.4e-17  Score=171.07  Aligned_cols=341  Identities=13%  Similarity=0.120  Sum_probs=204.1

Q ss_pred             CCEEEEccCCcccc--cCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC----cCCCCeEEEeCChh
Q 010250           99 GKKYLDSLAGLWCT--ALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT----ASKMAKVFFTNSGS  172 (514)
Q Consensus        99 G~~ylD~~s~~~~~--~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~----~~~~~~v~~~~sGs  172 (514)
                      |+.++++..|....  .++ .++.+.+++.+.+......  . ..+.....++.+.+++++.    ....++|++++|++
T Consensus        30 ~~~~i~l~~g~p~~~~~~~-~~~~~~~~~~~~~~~~~~~--~-Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~  105 (401)
T TIGR01264        30 EKPMIKLSIGDPTVFGNLP-TDPEVMQAMKDSLDSGKYN--G-YAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCS  105 (401)
T ss_pred             CCCeeecCCCCCCCcCCCC-CCHHHHHHHHHHHhccCCC--C-CCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChH
Confidence            56789988775421  233 4788999988877652110  0 1122233456666666553    13457899999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCCCCChh
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGETEE  250 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  250 (514)
                      +|+..++....        ..++.|++.+++|.......... |...            ..++++.  .|.         
T Consensus       106 ~al~~~~~~l~--------~~gd~v~i~~P~y~~~~~~~~~~-g~~v------------~~~~~~~~~~~~---------  155 (401)
T TIGR01264       106 HAIEMCIAALA--------NAGQNILVPRPGFPLYETLAESM-GIEV------------KLYNLLPDKSWE---------  155 (401)
T ss_pred             HHHHHHHHHhC--------CCCCEEEEeCCCChhHHHHHHHc-CCEE------------EEeecCCccCCC---------
Confidence            99999987663        23568999999997654222211 1110            0011100  000         


Q ss_pred             HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250          251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS  330 (514)
Q Consensus       251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g  330 (514)
                          .+++.+++.+..    ++.++++...++.+|.+. +.+.+++|.++|+++|+++|+||+|..|-..|..+. ....
T Consensus       156 ----~d~~~l~~~~~~----~~~~v~~~~p~NPtG~~~-~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~-~~~~  225 (401)
T TIGR01264       156 ----IDLKQLESLIDE----KTAALIVNNPSNPCGSVF-SRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFE-PLAS  225 (401)
T ss_pred             ----CCHHHHHHHhcc----CceEEEEcCCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccc-cHHH
Confidence                114566665532    234444443455666544 568899999999999999999999998754443211 1111


Q ss_pred             CCCc--hh---chhhhhcCCcccceeEEeCH------HHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--
Q 010250          331 IKPD--LV---SFAKALSSAYMPIGAILVSP------EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--  397 (514)
Q Consensus       331 v~pD--iv---~~sK~l~gG~~pig~v~~~~------~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--  397 (514)
                      ..++  ++   +|||.++..++++|++++++      ++++.+..        .....++.+++++.++.+.|+...+  
T Consensus       226 ~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~a~~~~l~~~~~~~  297 (401)
T TIGR01264       226 LSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVK--------LSQRILGPCTIVQGALPSILLRTPQEY  297 (401)
T ss_pred             cCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHH--------HhhccCCCCcHHHHHHHHHHHhCcHHH
Confidence            2222  32   68997555449999999864      34444432        1112345567777777777753111  


Q ss_pred             -ccHHHHHHHHHHHHHhhhhhccCCCcee-EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeC-
Q 010250          398 -RNIVEQVNKIAPKFQDGVKAFSDSPIIG-EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-  473 (514)
Q Consensus       398 -~~~~~~~~~~~~~l~~~L~~l~~~~~~~-~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g-  473 (514)
                       ++..+.++++.+.+.+.|+++   +.+. .....|.++++.+.....+.     .. ....+...|+ ++||++.++. 
T Consensus       298 l~~~~~~~~~~r~~l~~~L~~~---~~~~~~~p~~g~f~~~~~~~~~~~~-----~~-~~~~~~~~l~~~~gI~v~pg~~  368 (401)
T TIGR01264       298 FDGTLSVLESNAMLCYGALAAV---PGLRPVMPSGAMYMMVGIEMEHFPE-----FK-NDVEFTERLVAEQSVFCLPGSC  368 (401)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhC---CCCcccCCCeeeEEEEEecccccCC-----CC-CHHHHHHHHHHhCCEEEeCchh
Confidence             234556667777777777765   2122 12345778888875421000     00 1344667765 7899998752 


Q ss_pred             ----CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          474 ----DNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       474 ----~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                          +.+|++  +..+++++++++++|.+.+++
T Consensus       369 f~~~~~iRis--~~~~~~~l~~~l~rl~~~~~~  399 (401)
T TIGR01264       369 FEYPGFFRVV--LTVPVVMMEEACSRIQEFCER  399 (401)
T ss_pred             cCCCCeEEEE--EcCCHHHHHHHHHHHHHHHhc
Confidence                579999  567789999999999988764

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PRK03321 putative aminotransferase; Provisional

Probab=99.81  E-value=4.2e-18  Score=173.69  Aligned_cols=320  Identities=16%  Similarity=0.182  Sum_probs=199.7

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVK  180 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk  180 (514)
                      .+||+..+.  ..+| .+|.+.+++.+.+.....|      +.....++.+.+++++. .+.++++++++.++++..++.
T Consensus        23 ~~i~l~~~~--~~~~-~~~~~~~a~~~~~~~~~~y------~~~g~~~lr~~ia~~~~-~~~~~I~~~~G~~~~l~~~~~   92 (352)
T PRK03321         23 GAIKLSSNE--TPFG-PLPSVRAAIARAAAGVNRY------PDMGAVELRAALAEHLG-VPPEHVAVGCGSVALCQQLVQ   92 (352)
T ss_pred             cceeccCCC--CCCC-CCHHHHHHHHHHHHhcCcC------CCCcHHHHHHHHHHHhC-cCHHHEEECCCHHHHHHHHHH
Confidence            378887764  3355 4678999998877643322      22345678888888874 345789999888888887776


Q ss_pred             HHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHH
Q 010250          181 LVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL  260 (514)
Q Consensus       181 ~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  260 (514)
                      ...        ..++.|++..++|....... ...|...            ..++....+.             .+++++
T Consensus        93 ~~~--------~~gd~Vli~~p~y~~~~~~~-~~~g~~~------------~~v~~~~~~~-------------~~~~~l  138 (352)
T PRK03321         93 ATA--------GPGDEVIFAWRSFEAYPILV-QVAGATP------------VQVPLTPDHT-------------HDLDAM  138 (352)
T ss_pred             Hhc--------CCCCEEEeCCCCHHHHHHHH-HHcCCEE------------EEccCCCCCC-------------CCHHHH
Confidence            543        33467888878775432111 1111110            0111100000             114666


Q ss_pred             HHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh--cCCEEEEechhcCccccccc-ceecccCCCCchh-
Q 010250          261 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK--YDILFIADEVICAFGRLGTM-FGCDKYSIKPDLV-  336 (514)
Q Consensus       261 e~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~--~gillI~DEv~tG~gr~G~~-~~~~~~gv~pDiv-  336 (514)
                      ++.+.    +++.+|++...++.+|.+.+    .+++.++|++  +|+++|+||+|.+|...+.. .........++++ 
T Consensus       139 ~~~~~----~~~~~v~l~~p~NPtG~~~~----~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~  210 (352)
T PRK03321        139 AAAIT----DRTRLIFVCNPNNPTGTVVT----PAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVV  210 (352)
T ss_pred             HHhhc----cCCCEEEEeCCCCCcCCCcC----HHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEE
Confidence            66653    23445555555677787776    5677777765  69999999999877544321 1122222234555 


Q ss_pred             --chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHh
Q 010250          337 --SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQD  413 (514)
Q Consensus       337 --~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~  413 (514)
                        +|||.++..++++|++++++++++.+...         ..+++.+++++.++.++|+..++ .+..+++.+..+.+.+
T Consensus       211 ~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~---------~~~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~  281 (352)
T PRK03321        211 LRTFSKAYGLAGLRVGYAVGHPEVIAALRKV---------AVPFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRA  281 (352)
T ss_pred             EecchHHhhhHHHhhhhhcCCHHHHHHHHHh---------cCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence              68999873238999999999999988741         23567788888888888753221 1123333444455666


Q ss_pred             hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHH
Q 010250          414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDEL  492 (514)
Q Consensus       414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~  492 (514)
                      .|++.   ++. .....|.++++.+...             ...+.+.|.++||.+.+.+ +.|||+   ..+.++++++
T Consensus       282 ~L~~~---~~~-~~~~~g~~i~i~l~~~-------------~~~~~~~l~~~gI~v~~~~~~~iRi~---~~~~~~~~~~  341 (352)
T PRK03321        282 ALRAA---GWT-VPPSQANFVWLPLGER-------------TADFAAAAAEAGVVVRPFAGEGVRVT---IGAPEENDAF  341 (352)
T ss_pred             HHHHC---CCc-cCCCCCCEEEEeCCCC-------------HHHHHHHHHHCCEEEEccCCCcEEEe---eCCHHHHHHH
Confidence            66654   221 1223477777776321             3457888999999999865 469999   4799999999


Q ss_pred             HHHHHHHHH
Q 010250          493 ISKYGKALK  501 (514)
Q Consensus       493 ~~~l~~~l~  501 (514)
                      +++|+++++
T Consensus       342 ~~al~~~~~  350 (352)
T PRK03321        342 LRAARAWRA  350 (352)
T ss_pred             HHHHHHHhc
Confidence            999998764

>PTZ00377 alanine aminotransferase; Provisional

Probab=99.81  E-value=3.1e-17  Score=173.89  Aligned_cols=342  Identities=15%  Similarity=0.098  Sum_probs=197.4

Q ss_pred             CHHHHHHHHHHHhcCC---ccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCC
Q 010250          118 EPRLVAAATAQLNTLP---FYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPN  193 (514)
Q Consensus       118 ~p~v~~A~~~~l~~~~---~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~  193 (514)
                      +..+++++.+.++...   ..++...+..+....+++++.+..+ ....++|++++++++|+..+++...      . ..
T Consensus        90 P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~------~-~~  162 (481)
T PTZ00377         90 PADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLI------G-DP  162 (481)
T ss_pred             CHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhc------c-CC
Confidence            4567788776665422   1111112233333444444443221 1356799999999999999998763      0 13


Q ss_pred             ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHHHHHHHHHHHHHHHhCC--
Q 010250          194 KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYSTRLANNLEDLILKEGP--  269 (514)
Q Consensus       194 ~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~--  269 (514)
                      ++.|++.+++|.+........+.....             +++.  ..|.             .++++|++.+.....  
T Consensus       163 gD~Vlv~~P~y~~y~~~~~~~g~~~v~-------------v~~~~~~~~~-------------~d~~~l~~~l~~~~~~~  216 (481)
T PTZ00377        163 SDGVMIPIPQYPLYSAAITLLGGKQVP-------------YYLDEEKGWS-------------LDQEELEEAYEQAVRNG  216 (481)
T ss_pred             CCEEEECCCCchhHHHHHHHcCCEEEE-------------EEeccccCCC-------------CCHHHHHHHHHHHHhcC
Confidence            568999999998875443333222111             1110  0011             114777777753211  


Q ss_pred             CcE-EEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc-ccc-ee-c-ccCCCC------chh--
Q 010250          270 ETI-AAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG-TMF-GC-D-KYSIKP------DLV--  336 (514)
Q Consensus       270 ~~~-aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G-~~~-~~-~-~~gv~p------Div--  336 (514)
                      .++ +.+++.| +|.+|.+ .+.+.+++|.++|++||+++|+||+|..+...+ ..+ .. . ..++.+      .++  
T Consensus       217 ~~~k~l~l~~P-~NPTG~~-~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~  294 (481)
T PTZ00377        217 ITPRALVVINP-GNPTGQV-LTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSF  294 (481)
T ss_pred             CCeeEEEEECC-CCCCCcC-CCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEE
Confidence            134 4566666 5556654 467889999999999999999999998764322 121 11 0 011222      233  


Q ss_pred             -chhhhhcC-CcccceeEEe---CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH-----------Hhh-cc
Q 010250          337 -SFAKALSS-AYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI-----------YKE-RN  399 (514)
Q Consensus       337 -~~sK~l~g-G~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~-----------~~~-~~  399 (514)
                       +|||.+.+ .++++|++++   ++++++.+...        ...+++.+++++.++.++|+.           .++ ..
T Consensus       295 ~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~--------~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~  366 (481)
T PTZ00377        295 HSTSKGIIGECGRRGGYFELTNIPPEVREQIYKL--------ASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDA  366 (481)
T ss_pred             ecCCcccccCCcCceEEEEEeCCCHHHHHHHHHH--------hheecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHH
Confidence             58998642 2299999986   88998888641        112345677888888887742           111 12


Q ss_pred             HHHHHHHHHHHHHhhhhhccCCCceeEEEeee-eeEEEEEccCCCCCCCCCC-ccchHHH-HHHHHHHCCcEEEeeC---
Q 010250          400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPP-EWGIGAY-FGAQCEKHGMLVRVSG---  473 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~Gv~~~~~g---  473 (514)
                      +.+.++++.+.+.+.|+++   +.+......| .++++++............ ....... +...+.++||.+.|+.   
T Consensus       367 ~~~~~~~rr~~l~~~L~~~---~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~  443 (481)
T PTZ00377        367 IFTSLKRRAELLTDELNKI---EGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFG  443 (481)
T ss_pred             HHHHHHHHHHHHHHHHhcC---CCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccC
Confidence            2334566677777777654   3333344444 4555444311100000000 0000122 3455667899998642   


Q ss_pred             -----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250          474 -----DNIMMSPPFIMSPEEVDELISKYGKALKATEERV  507 (514)
Q Consensus       474 -----~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~  507 (514)
                           +.+|++  +..+++++++++++|.+++++..+++
T Consensus       444 ~~~~~~~~Rls--~~~~~e~l~~~l~rl~~~~~~~~~~~  480 (481)
T PTZ00377        444 QKPGTYHFRIT--ILPPEEQIEEMVKKIKEFHESFMKKY  480 (481)
T ss_pred             CCCCCCEEEEE--ECCCHHHHHHHHHHHHHHHHHHHHhh
Confidence                 369999  56788999999999999998776653

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=99.81  E-value=1e-17  Score=169.22  Aligned_cols=303  Identities=13%  Similarity=0.094  Sum_probs=195.0

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV  179 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al  179 (514)
                      ..++|+.+|.  +++|...+.+.+   ..+..+         +. ...+|.+.|++.+   +.++|++++|+.||+..++
T Consensus        20 ~~~i~l~~ne--~p~~~~~~~~~~---~~~~~y---------p~-~~~~Lr~~ia~~~---~~~~I~it~Gs~~al~~~~   81 (330)
T PRK05664         20 ADWLDLSTGI--APWPWPVPAIPA---DAWARL---------PE-TDDGLEAAARAYY---GAPQLLPVAGSQAAIQALP   81 (330)
T ss_pred             HHheeecCCc--CCCCCCCcccCH---HHHHhC---------CC-ChHHHHHHHHHHh---CCCCEEECcCHHHHHHHHH
Confidence            4679988876  677876444432   222222         11 1257888898887   3478999999999998775


Q ss_pred             HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250          180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN  259 (514)
Q Consensus       180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (514)
                      .+          ..+++|++.+++|.+....+...+....               .+|                   .++
T Consensus        82 ~~----------~~gd~v~v~~P~y~~~~~~~~~~g~~~~---------------~v~-------------------~~~  117 (330)
T PRK05664         82 RL----------RAPGRVGVLSPCYAEHAHAWRRAGHQVR---------------ELD-------------------EAE  117 (330)
T ss_pred             Hc----------cCCCEEEEcCCChHHHHHHHHHcCCeEE---------------Eec-------------------hhh
Confidence            31          2346899999999887543333222110               001                   134


Q ss_pred             HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh---
Q 010250          260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV---  336 (514)
Q Consensus       260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv---  336 (514)
                      +++.+.    +....+++.|. +.+|.+. +.+.+++|.++|+++|+++|+||++..+.......   .+.-.+.++   
T Consensus       118 ~~~~~~----~~~~v~l~nP~-NPTG~~~-s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~---~~~~~~~vi~~~  188 (330)
T PRK05664        118 VEAALD----SLDVLVVVNPN-NPTGRRF-DPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLA---ACAHRPGLIVLR  188 (330)
T ss_pred             Hhhhhc----CCCEEEEeCCc-CCCCCcc-CHHHHHHHHHHHHhcCCEEEEECCcccCCCccccc---ccccCCCEEEEe
Confidence            444442    22357888886 4556544 56779999999999999999999998663211111   111123333   


Q ss_pred             chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhhh
Q 010250          337 SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDGV  415 (514)
Q Consensus       337 ~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L  415 (514)
                      +|||.++-.++++|++++++++++.+...         ..++..+.++..++.++|+... .+...+.++++.+++.+.|
T Consensus       189 SfSK~~gl~GlRiG~~v~~~~l~~~~~~~---------~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L  259 (330)
T PRK05664        189 SFGKFFGLAGARLGFVLAEPALLRALAEL---------LGPWTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALL  259 (330)
T ss_pred             eccccccCCCcceEEEEeCHHHHHHHHHh---------cCCCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence            68998873338999999999999888741         1244556777777877775322 2345677788888888888


Q ss_pred             hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--CEEEEeCCCCCCHHHHHHHH
Q 010250          416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEEVDELI  493 (514)
Q Consensus       416 ~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--~~iRi~p~~~~t~e~id~~~  493 (514)
                      +++   .+ ....+.+.++.+.+.+              ...+.+.|.++||.++..+  +.|||+  +..++++.++++
T Consensus       260 ~~~---~~-~~~~~~~~f~~~~~~~--------------~~~~~~~l~~~gi~v~~f~~~~~iRis--~~~~~~~~~~l~  319 (330)
T PRK05664        260 RRH---GL-TPAGGCALFQWVRTED--------------AAALHEFLARRGILTRLFEQPASLRFG--LPADEADWARLD  319 (330)
T ss_pred             HHC---CC-cccCCcceEEEEecCC--------------HHHHHHHHHHCCeEEEECCCCCeEEEE--CCCCHHHHHHHH
Confidence            775   11 1112223455554321              3457889999999998643  579999  444788888888


Q ss_pred             HHHHHHHHH
Q 010250          494 SKYGKALKA  502 (514)
Q Consensus       494 ~~l~~~l~~  502 (514)
                      +.|++..++
T Consensus       320 ~al~~~~~~  328 (330)
T PRK05664        320 QALLAYRKE  328 (330)
T ss_pred             HHHHHHHhh
Confidence            888766543

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.80  E-value=1.8e-17  Score=171.97  Aligned_cols=338  Identities=17%  Similarity=0.189  Sum_probs=196.2

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-cccc----ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHS----FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEA  174 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~----~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA  174 (514)
                      +.|||..+.      +.-++.|++++.+.+.... ..+.    +.....+...++.+.++++++ .+.+.++|++||+++
T Consensus         4 ~~yld~aa~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g-~~~~~v~~~~g~t~a   76 (402)
T TIGR02006         4 PIYLDYAAT------TPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIG-ADSREIVFTSGATES   76 (402)
T ss_pred             cEEeeCCcC------CCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEeCCHHHH
Confidence            478997654      3358999999988875321 1110    000112345566788888875 345789999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee---cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS---LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE  251 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~---~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (514)
                      ++.+++.+....   . .++++||+.... |........   ..|..            +..++..+.+.          
T Consensus        77 ~~~~l~~l~~~~---~-~~g~~Vi~~~~~-h~s~~~~~~~~~~~g~~------------v~~v~~~~~~~----------  129 (402)
T TIGR02006        77 NNLAIKGIAHFY---K-SKGNHIITSKTE-HKAVLDTCRYLEREGFE------------VTYLPPKSNGL----------  129 (402)
T ss_pred             HHHHHHHHHHhh---c-CCCCEEEECCCc-cHHHHHHHHHHHhcCCE------------EEEEccCCCCc----------
Confidence            999987664221   1 223456665544 544322211   11111            11111111100          


Q ss_pred             HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC
Q 010250          252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI  331 (514)
Q Consensus       252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv  331 (514)
                         .+.+++++.+.    +++.+|++..+++.+|.+.|    +++|.++|++||+++|+|++|+ +|..    .++..+.
T Consensus       130 ---~d~~~l~~~l~----~~~~lv~v~~~~n~tG~~~~----~~~I~~l~~~~g~~livD~a~a-~g~~----~~~~~~~  193 (402)
T TIGR02006       130 ---IDLEELKAAIR----DDTILVSIMHVNNEIGVIQD----IAAIGEICRERKVFFHVDAAQS-VGKI----PINVNEL  193 (402)
T ss_pred             ---CCHHHHHHhcC----CCCEEEEEECCCcCceeccc----HHHHHHHHHHcCCEEEEEcchh-cCCc----ccCcccc
Confidence               11466666653    34678888899999999887    9999999999999999999997 5433    2233345


Q ss_pred             CCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCC-CCCcHHHHHHHHHHHHHHhh--ccHHHHHHH
Q 010250          332 KPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT-YSGHPVSCAVAIEALKIYKE--RNIVEQVNK  406 (514)
Q Consensus       332 ~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t-~~~~pl~~aaa~aal~~~~~--~~~~~~~~~  406 (514)
                      .+|++++|  |.++ + ..+|+++++++....+.+.... +....+.. .+.+...+.+..++++.+++  +...++.++
T Consensus       194 ~~D~~~~s~~K~~g-p-~G~G~l~~~~~~~~~~~~~~~g-~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~  270 (402)
T TIGR02006       194 KVDLMSISGHKIYG-P-KGIGALYVRRKPRVRLEALIHG-GGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLA  270 (402)
T ss_pred             CCCEEEEehhhhcC-C-CceEEEEEccCCCCCCCceecC-CCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            68999888  9654 3 4589999887654433321000 00000111 22344455555577777654  234677888


Q ss_pred             HHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe--------------
Q 010250          407 IAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV--------------  471 (514)
Q Consensus       407 ~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~--------------  471 (514)
                      +.++++++|+++....+....... ...+.+.|....            ...+...+  +|+.++.              
T Consensus       271 l~~~l~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~------------~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~  336 (402)
T TIGR02006       271 LRDRLLNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVE------------GESLIMAL--KDLAVSSGSACTSASLEPSYV  336 (402)
T ss_pred             HHHHHHHHHhcCCCEEEeCCccccCCCeEEEEEeCcC------------HHHHHHhc--CCEEEechhhcCCCCCCccHH
Confidence            888888888765321111111101 011123332111            11222222  3444321              


Q ss_pred             ----------eCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          472 ----------SGDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       472 ----------~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                                ....||+++....|++|||++++.|+++++.++
T Consensus       337 l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~~~l~~~~~~~~  379 (402)
T TIGR02006       337 LRALGINDELAHSSIRFTIGRFTTEEEIDYAVKLVKSAIDKLR  379 (402)
T ss_pred             HHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence                      125699999999999999999999999987754

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.80  E-value=3.1e-17  Score=168.77  Aligned_cols=323  Identities=14%  Similarity=0.188  Sum_probs=194.4

Q ss_pred             CCHHHHHHHHHHHhcCCc-ccc-ccc---cCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCC
Q 010250          117 SEPRLVAAATAQLNTLPF-YHS-FWN---RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR  191 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~-~~~-~~~---~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~  191 (514)
                      .++.+.+++.+.+++... .+. .+.   .......++.+.+++++.....++++|++|+++++..++....        
T Consensus        12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~--------   83 (376)
T TIGR01977        12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLL--------   83 (376)
T ss_pred             CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhcc--------
Confidence            467899999888876421 100 000   0124556788889998854334589999999999998886532        


Q ss_pred             CCccEEEEEecCCcccceee--e-ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC
Q 010250          192 PNKKKFIARQKSYHGSTLIA--A-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG  268 (514)
Q Consensus       192 ~~~~~ii~~~~~yHG~t~~~--~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~  268 (514)
                      ..+++|++....|++.....  + ...|...            ..++....             ...+.+++++.+.   
T Consensus        84 ~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~-------------~~~d~~~l~~~~~---  135 (376)
T TIGR01977        84 KEGDHVITTPMEHNSVARPLECLKEQIGVEI------------TIVKCDNE-------------GLISPERIKRAIK---  135 (376)
T ss_pred             CCCCEEEECcchhhHHHHHHHHHHHHcCcEE------------EEEecCCC-------------CCcCHHHHHHhcC---
Confidence            23467777766654432100  0 0001110            01111100             0112466776663   


Q ss_pred             CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCc
Q 010250          269 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAY  346 (514)
Q Consensus       269 ~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~  346 (514)
                       +++++|++..+++.+|.+.+    +++|.++|++||+++|+|++++ +|...  +..+  ...+|+++++  |+++++ 
T Consensus       136 -~~~~~v~~~~~~n~tG~~~~----~~~i~~l~~~~~~~livD~a~~-~g~~~--~~~~--~~~~D~~~~s~~K~l~~p-  204 (376)
T TIGR01977       136 -TNTKLIVVSHASNVTGTILP----IEEIGELAQENGIFFILDAAQT-AGVIP--IDMT--ELAIDMLAFTGHKGLLGP-  204 (376)
T ss_pred             -CCCeEEEEECCCCCccccCC----HHHHHHHHHHcCCEEEEEhhhc-cCccC--CCch--hcCCCEEEecccccccCC-
Confidence             35667778788888898887    8999999999999999999996 55432  1222  2346887655  998874 


Q ss_pred             ccceeEEeCHHH-HHHhhhccCCCCc--c------ccc-CCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHh
Q 010250          347 MPIGAILVSPEV-SEVIHSQSNTLGS--F------SHG-FTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQD  413 (514)
Q Consensus       347 ~pig~v~~~~~i-~~~l~~~~~~~~~--~------~~~-~t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~  413 (514)
                      ...|+++.+++. +..+.........  +      ... .....+...+++..++++.+.+.   .+.++..++.+++++
T Consensus       205 ~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~  284 (376)
T TIGR01977       205 QGTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLN  284 (376)
T ss_pred             CCceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence            356777776654 1111110000000  0      000 01123455566666788877654   356788888888888


Q ss_pred             hhhhccCCCceeE--EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee---------------CCE
Q 010250          414 GVKAFSDSPIIGE--IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS---------------GDN  475 (514)
Q Consensus       414 ~L~~l~~~~~~~~--v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~---------------g~~  475 (514)
                      .|+++....+...  ....+.++.+.+.+..            ...+.+.|.++ ||.++.+               .+.
T Consensus       285 ~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~  352 (376)
T TIGR01977       285 GLREINKVKIYGPADPANRVGVVSFTVEGID------------SEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGT  352 (376)
T ss_pred             HHhcCCCeEEeCCCCccccCCeEEEEECCCC------------HHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCe
Confidence            8876522222211  1113456666653211            34577888887 8888642               246


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~  498 (514)
                      ||+++...+|++||+.++++|++
T Consensus       353 iRis~~~~~t~~dv~~~~~~l~~  375 (376)
T TIGR01977       353 IRLSLGYFNTEEEIEKLLEALSE  375 (376)
T ss_pred             EEEecCCCCCHHHHHHHHHHHhh
Confidence            99999999999999999999875

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>PRK10534 L-threonine aldolase; Provisional

Probab=99.80  E-value=6e-18  Score=171.18  Aligned_cols=322  Identities=14%  Similarity=0.155  Sum_probs=191.7

Q ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHH
Q 010250          102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKL  181 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~  181 (514)
                      +|||.|+   .+=| -+|.+++|+.+.......|     ++.+...+|.+.|++++   +.+.+++++||++++..++..
T Consensus         1 ~~~~~~~---~~~~-p~~~~~~a~~~~~~~~~~Y-----~~~~~~~~L~~~la~~~---g~~~~~v~~~g~~a~~~~l~~   68 (333)
T PRK10534          1 MIDLRSD---TVTR-PSRAMLEAMMAAPVGDDVY-----GDDPTVNALQDYAAELS---GKEAALFLPTGTQANLVALLS   68 (333)
T ss_pred             Ccccccc---cCCC-CCHHHHHHHHhccCCCccc-----CCCHHHHHHHHHHHHHh---CCCeEEEeCchHHHHHHHHHH
Confidence            4789888   4445 7899999987755433222     14566789999999997   456778999999998888865


Q ss_pred             HHHHHhhcCCCCccEEEEEecCCcccc-eeeeecCC-CccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250          182 VWYYNNALGRPNKKKFIARQKSYHGST-LIAASLSG-LPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN  259 (514)
Q Consensus       182 a~~~~~~~~~~~~~~ii~~~~~yHG~t-~~~~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (514)
                      ..        ...++|++..++|.... ..+....+ ...            ..++....|.             .++++
T Consensus        69 ~~--------~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~-------------~d~~~  115 (333)
T PRK10534         69 HC--------ERGEEYIVGQAAHNYLYEAGGAAVLGSIQP------------QPIDAAADGT-------------LPLDK  115 (333)
T ss_pred             hc--------CCCCeeEEechhhhhHhcCCchHHhcCceE------------EeecCCCCCC-------------CCHHH
Confidence            42        22356776555543211 11011111 000            0011111111             11466


Q ss_pred             HHHHHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc---cccceecccCCCCc
Q 010250          260 LEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL---GTMFGCDKYSIKPD  334 (514)
Q Consensus       260 le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~---G~~~~~~~~gv~pD  334 (514)
                      |++.+....  ..++.+|+++..+  +|.+. +.+.+++|.++|++||++||+||++. |+..   +...  ....-.+|
T Consensus       116 l~~~i~~~~~~~~~~~lv~l~np~--~G~v~-~~~~l~~i~~~~~~~~~~lvvDEA~~-~~~~~~~~~~~--~~~~~~~~  189 (333)
T PRK10534        116 VAAKIKPDDIHFARTRLLSLENTH--NGKVL-PREYLKQAWEFTRERNLALHVDGARI-FNAVVAYGCEL--KEITQYCD  189 (333)
T ss_pred             HHHhhcccCcCcccceEEEEecCC--CCeec-CHHHHHHHHHHHHHcCCeEEeeHHHH-HHHHHHcCCCH--HHHHhcCC
Confidence            666653210  0134556665322  47666 45778899999999999999999976 5322   2111  00001123


Q ss_pred             --hhchhhhhcCCcccce-eEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 010250          335 --LVSFAKALSSAYMPIG-AILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKF  411 (514)
Q Consensus       335 --iv~~sK~l~gG~~pig-~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l  411 (514)
                        +++|||+++.   ++| ++++++++++.+....    . ..+..+..+.++++++.++|+..  .+..++..+.++++
T Consensus       190 ~~~~s~SK~~~~---~~G~~~~~~~~~i~~~~~~~----~-~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~r~~l  259 (333)
T PRK10534        190 SFTICLSKGLGT---PVGSLLVGNRDYIKRARRWR----K-MTGGGMRQAGILAAAGLYALKHN--VARLQEDHDNAAWL  259 (333)
T ss_pred             EEEEEeEcCCCC---cccceEEcCHHHHHHHHHHH----H-HhCCchhhHHHHHHHHHHHHHhh--HHHHHHHHHHHHHH
Confidence              4579997663   578 5778999988886421    0 11122333446667777777532  12334444566788


Q ss_pred             HhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHH
Q 010250          412 QDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDE  491 (514)
Q Consensus       412 ~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~  491 (514)
                      .+.|+++ +....   ...+.++.+.+.+.            ....+.+.|+++||++++. ..+|+...+.+|+|++++
T Consensus       260 ~~~L~~~-g~~~~---~~~~nfv~~~~~~~------------~~~~~~~~l~~~gi~v~~~-~~~rl~~~~r~t~e~~~~  322 (333)
T PRK10534        260 AEQLREA-GADVM---RQDTNMLFVRVGEE------------QAAALGEYMRERNVLINAS-PIVRLVTHLDVSREQLAE  322 (333)
T ss_pred             HHHHHhC-CCccC---CCCceEEEEECCch------------hHHHHHHHHHHcCeeecCC-ceEEEEEEeCCCHHHHHH
Confidence            8888875 22221   22466666665421            1345778999999999865 468888655689999999


Q ss_pred             HHHHHHHHHH
Q 010250          492 LISKYGKALK  501 (514)
Q Consensus       492 ~~~~l~~~l~  501 (514)
                      ++++|++.+.
T Consensus       323 ~~~~l~~~~~  332 (333)
T PRK10534        323 VVAHWRAFLA  332 (333)
T ss_pred             HHHHHHHHhc
Confidence            9999987653

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=99.80  E-value=1.5e-17  Score=169.79  Aligned_cols=320  Identities=14%  Similarity=0.101  Sum_probs=197.3

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ  178 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A  178 (514)
                      ++.++|+..|.  ++++ .+|.+++++.+.+......    +.+.....++.+.|++++.-...+++++++++++++..+
T Consensus        25 ~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~----~Y~~~~~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~   97 (356)
T PRK04870         25 ATGMVKLDAME--NPYR-LPAELRAELGERLAEVALN----RYPDPRAAALKAALRAAMGVPAGADVLLGNGSDELIQLL   97 (356)
T ss_pred             CCCceeCcCCC--CCCC-CCHHHHHHHHHHhhccccc----cCCCCCHHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHH
Confidence            46788887663  4455 5889999999988642211    111123467888888887422224799999999999888


Q ss_pred             HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250          179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN  258 (514)
Q Consensus       179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (514)
                      +++..        ..++.|++.+++|.+....+... |....            .++..+.|.             .+.+
T Consensus        98 ~~~~~--------~~gd~vlv~~P~y~~~~~~~~~~-g~~~~------------~i~~~~~~~-------------~d~~  143 (356)
T PRK04870         98 ALACA--------KPGATVLAPEPGFVMYRMSAKLA-GLEFV------------GVPLTADFT-------------LDLP  143 (356)
T ss_pred             HHHhc--------CCCCEEEECCCCHHHHHHHHHHc-CCEEE------------EecCCCCCC-------------CCHH
Confidence            87653        33568999999998764322221 21110            111111111             1146


Q ss_pred             HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch---
Q 010250          259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL---  335 (514)
Q Consensus       259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi---  335 (514)
                      ++++.+..   .++.+|++...++.+|.+.+ .+.+++|.++|   ++++|+||+|..|... . +. ....-.+.+   
T Consensus       144 ~l~~~~~~---~~~~~v~l~~p~NPtG~~~~-~~~~~~i~~~~---~~~ii~De~y~~~~~~-~-~~-~~~~~~~~vi~~  213 (356)
T PRK04870        144 AMLAAIAE---HRPALVFLAYPNNPTGNLFD-DADVERIIEAA---PGLVVVDEAYQPFAGD-S-WL-PRLARFPNLLVM  213 (356)
T ss_pred             HHHHHhhc---CCCCEEEEcCCCCCCCCCCC-HHHHHHHHHHC---CCEEEEECCchhhcCc-c-hH-HHHhhCCCEEEE
Confidence            67776642   23444544434666776664 45566666666   7899999999877421 1 11 111111232   


Q ss_pred             hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhh
Q 010250          336 VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDG  414 (514)
Q Consensus       336 v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~  414 (514)
                      -+||| ++..++++|++++++++++.+...       .  ..++.+.+++.++..+++..+ -++..++++++.+.+.+.
T Consensus       214 ~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~-------~--~~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~  283 (356)
T PRK04870        214 RTVSK-LGLAGLRLGYLAGHPAWIAELDKV-------R--PPYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAA  283 (356)
T ss_pred             ecchh-hhhHHHhhhhhhCCHHHHHHHHHc-------c--CCCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence            26899 444338999999999999888641       1  234566777777777765321 123456677777778887


Q ss_pred             hhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------CCEEEEeCCCCCCHH
Q 010250          415 VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMSPPFIMSPE  487 (514)
Q Consensus       415 L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g~~iRi~p~~~~t~e  487 (514)
                      |+++.+   +......|.++++.+.+              ...+...|.++||.++++       .+.+|++   ..+.+
T Consensus       284 L~~~~~---~~~~~~~~~~~~~~~~~--------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis---~~~~~  343 (356)
T PRK04870        284 LAALPG---VTVFPSAANFILVRVPD--------------AAAVFDGLKTRGVLVKNLSGMHPLLANCLRVT---VGTPE  343 (356)
T ss_pred             HHhCCC---cEECCCCCeEEEEECCC--------------HHHHHHHHHHCCEEEEECCCCCCCCCCeEEEe---CCCHH
Confidence            776522   22223456667776541              245778899999999864       2479999   34789


Q ss_pred             HHHHHHHHHHHH
Q 010250          488 EVDELISKYGKA  499 (514)
Q Consensus       488 ~id~~~~~l~~~  499 (514)
                      ++++++++|+++
T Consensus       344 ~~~~l~~al~~~  355 (356)
T PRK04870        344 ENAQFLAALKAA  355 (356)
T ss_pred             HHHHHHHHHHHh
Confidence            999999998865

>PRK07550 hypothetical protein; Provisional

Probab=99.80  E-value=4.3e-17  Score=168.35  Aligned_cols=339  Identities=13%  Similarity=0.085  Sum_probs=202.0

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEAN  175 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~  175 (514)
                      .|+.++||.++...  +. .++.+.+++.+.+..... .+....+..+....+++.+.+..+ ....+++++++++++|+
T Consensus        27 ~~~~~i~l~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al  103 (386)
T PRK07550         27 ADGPLIDLSQAVPG--YP-PPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAF  103 (386)
T ss_pred             cCCCeEEeCCCCCC--CC-CCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHH
Confidence            35668999887532  22 367788888877643111 111112233444455555554432 13457899999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYS  253 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  253 (514)
                      ..++++..        ..+++|++.+++|.+....... .|...            ..++..  ..|.            
T Consensus       104 ~~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~-~g~~~------------~~v~~~~~~~~~------------  150 (386)
T PRK07550        104 WAAMVTLA--------GAGDEVILPLPWYFNHKMWLDM-LGIRP------------VYLPCDEGPGLL------------  150 (386)
T ss_pred             HHHHHHhc--------CCCCEEEEcCCCCcchHHHHHh-cCCEE------------EEEecCCCcCCC------------
Confidence            98887763        2356799999999765322111 11111            011110  0000            


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc-cc-eecccCC
Q 010250          254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MF-GCDKYSI  331 (514)
Q Consensus       254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~-~~-~~~~~gv  331 (514)
                       .+.+++++++..   +..+.+++.|. +.+|.+. +.+.+++|.++|++||+++|+||++.+|...+. .. .....+.
T Consensus       151 -~~~~~l~~~~~~---~~~~v~~~~P~-NPtG~~~-~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~  224 (386)
T PRK07550        151 -PDPAAAEALITP---RTRAIALVTPN-NPTGVVY-PPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDW  224 (386)
T ss_pred             -CCHHHHHHHhcc---cCcEEEEeCCC-CCCCccc-CHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCc
Confidence             014667777652   33455666665 5566554 578899999999999999999999987732211 10 1111111


Q ss_pred             CCc---hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHH
Q 010250          332 KPD---LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNK  406 (514)
Q Consensus       332 ~pD---iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~  406 (514)
                      ..+   +.+|||.++..++++|++++++++++.+...       ....+.+.+.+++.++..+++.+++  ++..+.+++
T Consensus       225 ~~~~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~-------~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~  297 (386)
T PRK07550        225 DDTLVHLYSFSKSYALTGHRVGAVVASPARIAEIEKF-------MDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIAR  297 (386)
T ss_pred             cccEEEEecchhhccCcccceEeeecCHHHHHHHHHH-------HhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence            122   3378999973238999999999988877641       2223445566777777666654322  234566777


Q ss_pred             HHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEE
Q 010250          407 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMM  478 (514)
Q Consensus       407 ~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi  478 (514)
                      +.+.+.+.|+....  + .....-|.+.++.+.....          ....++..|. ++||.+.++       .+.+|+
T Consensus       298 ~~~~l~~~L~~~~~--~-~~~~~g~~~~~~~~~~~~~----------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi  364 (386)
T PRK07550        298 RRDAFRAVFARLPG--W-ELLASGAYFAYVRHPFPDR----------PSREVARRLAKEAGILCLPGTMFGPGQEGYLRL  364 (386)
T ss_pred             HHHHHHHHHHhCCC--c-eeCCCceEEEEecCCCCCC----------CHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEE
Confidence            77788888776421  1 1112234566666643110          1345777764 689999874       246999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~  499 (514)
                      +.. ..+++++++++++|.+.
T Consensus       365 s~~-~~~~~~~~~~~~~l~~~  384 (386)
T PRK07550        365 AFA-NADVAGIGELVERLRAF  384 (386)
T ss_pred             Eee-cCCHHHHHHHHHHHHhh
Confidence            953 35789999999998764

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.80  E-value=2.2e-17  Score=169.11  Aligned_cols=302  Identities=14%  Similarity=0.194  Sum_probs=189.7

Q ss_pred             chHHHHHHHHHHhcCcCC-CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee-eecCCCcccc
Q 010250          144 KPSLDLAKELLEMFTASK-MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA-ASLSGLPALH  221 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~-~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~-~~~s~~~~~~  221 (514)
                      +...++.+.++++++... .+.+++++||++|++.++....        ..++++|+...++++..... ....|.+   
T Consensus        35 ~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~--------~~~~~vlv~~~~~~~~~~~~~a~~~g~~---  103 (363)
T TIGR02326        35 IVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAV--------PKDGKLLVVINGAYGARIVQIAEYLGIP---  103 (363)
T ss_pred             HHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcC--------CCCCeEEEEeCChhhHHHHHHHHHcCCc---
Confidence            445667788888885422 3479999999999999987653        23456777777777653111 1111111   


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                               +..++.+...             ..+++++++++.+.  .++..+.+-.+.+.+|++.|    +++|.++|
T Consensus       104 ---------~~~v~~~~~~-------------~~d~~~l~~~l~~~--~~~~~v~~~~~~~~tG~~~~----i~~I~~l~  155 (363)
T TIGR02326       104 ---------HHVVDTGEVE-------------PPDVVEVEAILAAD--PAITHIALVHCETTTGILNP----IEAVAKLA  155 (363)
T ss_pred             ---------eEEEeCCCCC-------------CCCHHHHHHHHhhC--CCccEEEEEeecCCccccCc----HHHHHHHH
Confidence                     1111211100             01157788877642  23445555555677888887    89999999


Q ss_pred             HhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccceeEEeCHHHHHHhhhccCCC--Cc------
Q 010250          302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTL--GS------  371 (514)
Q Consensus       302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~--~~------  371 (514)
                      ++||+++|+|++|+ +|..  .....  ...+|+++  ++|+|.|+ ..+|+++++++.++.+.......  ..      
T Consensus       156 ~~~g~~livD~~~~-~g~~--~~~~~--~~~~D~~~~s~~K~l~~p-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (363)
T TIGR02326       156 HRHGKVTIVDAMSS-FGGI--PIDIA--ELHIDYLISSANKCIQGV-PGFGFVIARQAELAACKGNARSLSLDLYDQWRC  229 (363)
T ss_pred             HHcCCEEEEEcccc-ccCc--ccchh--hcCccEEEecCccccccC-CcceEEEECHHHHHHhhcCCCceeecHHHHHHH
Confidence            99999999999986 6543  22223  23467764  56999875 46799999998877654211000  00      


Q ss_pred             c--cc-cCCCCCcHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCC
Q 010250          372 F--SH-GFTYSGHPVSCAVAIEALKIYKER----NIVEQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKS  443 (514)
Q Consensus       372 ~--~~-~~t~~~~pl~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~  443 (514)
                      +  .. ...|..++.+..+..++++.+.++    +..++++++.+++++.|+++ +....... ...+.+..+.+.+...
T Consensus       230 ~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~  308 (363)
T TIGR02326       230 MEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSPEDPD  308 (363)
T ss_pred             HhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEECCCCCC
Confidence            0  00 123455666777777788766443    35678888888999988776 22222111 1123344555543210


Q ss_pred             CCCCCCCccchHHHHHHHHHHCCcEEEee----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          444 PNEPFPPEWGIGAYFGAQCEKHGMLVRVS----GDNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       444 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----g~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                       .        ....+.+.|.++||.+.++    .+.||+++...++.+|+++++++|++++
T Consensus       309 -~--------~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~~~~edv~~~l~~l~~~l  360 (363)
T TIGR02326       309 -Y--------RFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGEVDAADITRLLTAIGKAM  360 (363)
T ss_pred             -C--------CHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence             0        1345778899999999865    3579999877789999999999998876

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=99.80  E-value=4.5e-18  Score=172.07  Aligned_cols=321  Identities=15%  Similarity=0.173  Sum_probs=202.0

Q ss_pred             eeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc--CCCCeE
Q 010250           88 KSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA--SKMAKV  165 (514)
Q Consensus        88 ~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~--~~~~~v  165 (514)
                      ++.|.+-+...|+..+|+..|.  +.+| .+|.+++++.+.+...... . +  +.....+|.+.+++++..  .+.++|
T Consensus         7 ~~~~~~~~~~~~~~~i~l~~~~--~~~~-~p~~~~~~~~~~~~~~~~~-~-Y--~~~~~~~Lr~aia~~~~~~~~~~~~i   79 (335)
T PRK14808          7 IAKRAYPYETEKRDRTYLALNE--NPFP-FPEDLVDEVFRRLNSDTLR-I-Y--YDSPDEELIEKILSYLDTDFLSKNNV   79 (335)
T ss_pred             hhccCcCCCCCCCceeEecCCC--CCCC-CCHHHHHHHHHHhhhhhhh-c-C--CCCChHHHHHHHHHHhCCCCCCcceE
Confidence            4556666667889999997764  4566 5788999998877531111 0 1  222356777888887741  346789


Q ss_pred             EEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCC
Q 010250          166 FFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHP  245 (514)
Q Consensus       166 ~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (514)
                      ++++|++|++..+++..            +.|++.+++|.+....+...+....             .++....|.    
T Consensus        80 ~it~Ga~~~i~~~~~~~------------d~v~v~~P~y~~~~~~~~~~g~~~~-------------~v~~~~~~~----  130 (335)
T PRK14808         80 SVGNGADEIIYVMMLMF------------DRSVFFPPTYSCYRIFAKAVGAKFL-------------EVPLTKDLR----  130 (335)
T ss_pred             EEcCCHHHHHHHHHHHh------------CcEEECCCCHHHHHHHHHHcCCeEE-------------EecCCCcCC----
Confidence            99999999999988754            3589999999887544433322111             011100000    


Q ss_pred             CCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce
Q 010250          246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG  325 (514)
Q Consensus       246 ~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~  325 (514)
                                 .++. . +   . .....++..|.|+ +|.+.+    .+++.+++ ++++++|+||++..|.  +....
T Consensus       131 -----------~~~~-~-~---~-~~~~i~i~nP~NP-TG~~~s----~~~l~~l~-~~~~~ii~DE~Y~~f~--~~~~~  185 (335)
T PRK14808        131 -----------IPEV-N-V---G-EGDVVFIPNPNNP-TGHVFE----REEIERIL-KTGAFVALDEAYYEFH--GESYV  185 (335)
T ss_pred             -----------CChh-H-c---c-CCCEEEEeCCCCC-CCCCcC----HHHHHHHH-hcCCEEEEECchhhhc--CCchH
Confidence                       0011 0 1   1 2334555555555 455554    34555555 5899999999999873  21110


Q ss_pred             ecccCCCCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHH
Q 010250          326 CDKYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIV  401 (514)
Q Consensus       326 ~~~~gv~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~  401 (514)
                       ....-.+.++   +|||.++-.++++|++++++++++.+...       .  .+++.+.++..++.++++..+. ++..
T Consensus       186 -~~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~~~~~~l~~~-------~--~~~~~~~~~q~a~~~~l~~~~~~~~~~  255 (335)
T PRK14808        186 -DLLKKYENLAVIRTFSKAFSLAAQRIGYVVSSEKFIDAYNRV-------R--LPFNVSYVSQMFAKVALDHREIFEERT  255 (335)
T ss_pred             -HHHHhCCCEEEEEechhhccCcccceEEEEeCHHHHHHHHHh-------c--CCCCCCHHHHHHHHHHHhCHHHHHHHH
Confidence             1111112333   68998883239999999999999988641       1  2355667777777777763221 2234


Q ss_pred             HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCC
Q 010250          402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPP  481 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~  481 (514)
                      +.+.+..+++.+.|+++   + .....+.|.++++.+....            ...+.+.|.++||+++...+.+|++  
T Consensus       256 ~~~~~~r~~l~~~L~~~---g-~~~~~~~g~f~~~~l~~~~------------~~~~~~~l~~~Gi~V~~~~~~~Ris--  317 (335)
T PRK14808        256 KFIVEERERMKSALREM---G-YRITDSRGNFVFIFMEKEE------------KERLLEHLRAKNIAVRSFREGVRIT--  317 (335)
T ss_pred             HHHHHHHHHHHHHHHHC---C-CEECCCCCeEEEEeCCCcc------------HHHHHHHHHHCCeEEEECCCCeEEe--
Confidence            45556666777777664   2 2223456888888775211            3457889999999999877789999  


Q ss_pred             CCCCHHHHHHHHHHHHH
Q 010250          482 FIMSPEEVDELISKYGK  498 (514)
Q Consensus       482 ~~~t~e~id~~~~~l~~  498 (514)
                       ..+.++.+++++.|++
T Consensus       318 -i~~~~~~~~~~~~l~~  333 (335)
T PRK14808        318 -IGKREENDMILKELEV  333 (335)
T ss_pred             -cCCHHHHHHHHHHHHh
Confidence             6778999999998864

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=99.80  E-value=6.8e-18  Score=172.79  Aligned_cols=337  Identities=15%  Similarity=0.157  Sum_probs=200.4

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccccc-ccCCchHHHHHHHHHHhcC-----cCCCC-eEEEeCChhH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFW-NRTTKPSLDLAKELLEMFT-----ASKMA-KVFFTNSGSE  173 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~~~ela~~L~~~~~-----~~~~~-~v~~~~sGse  173 (514)
                      ++|||.+|.  ..+++++|.+.+++.+..+......... ..+.....++.+.+++++.     ..+.+ .++++++..+
T Consensus         2 ~~I~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~   79 (363)
T PF00155_consen    2 DVINLGSNA--PLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQA   79 (363)
T ss_dssp             TEEESSSSS--TSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHH
T ss_pred             CEEEEECCC--CCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEeccccc
Confidence            478988873  3344456665555554433000000111 1233346788888888874     12345 6666665555


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS  253 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (514)
                      +...++.+..      . .+++.|++.+++|.+........ |.+....      +    +.....|             
T Consensus        80 ~~~~~~~~~~------~-~~~~~vlv~~P~y~~~~~~~~~~-g~~~~~~------~----~~~~~~~-------------  128 (363)
T PF00155_consen   80 ALFLLLRLLK------I-NPGDTVLVPDPCYPSYIEAARLL-GAEVIPV------P----LDSENDF-------------  128 (363)
T ss_dssp             HHHHHHHHHH------S-STTSEEEEEESSSTHHHHHHHHT-TSEEEEE------E----EEETTTT-------------
T ss_pred             chhhhhhccc------c-cccccceecCCcccccccccccc-Cceeeec------c----ccccccc-------------
Confidence            5555554442      1 34568999999998764322221 2111110      0    0000011             


Q ss_pred             HHHHHHHHHHHHHhCCC--cEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-e-eccc
Q 010250          254 TRLANNLEDLILKEGPE--TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-G-CDKY  329 (514)
Q Consensus       254 ~~~~~~le~li~~~~~~--~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~-~~~~  329 (514)
                      +.+.++|++.+.+...+  ++.++++...++++|... +.+.+++|.++|++||+++|+||+|.++......+ . ....
T Consensus       129 ~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~-~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~  207 (363)
T PF00155_consen  129 HLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVL-SLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLL  207 (363)
T ss_dssp             EETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB---HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHH
T ss_pred             cccccccccccccccccccccceeeeccccccccccc-ccccccchhhhhcccccceeeeeceeccccCCCccCcccccc
Confidence            12257888888763223  346666666677777654 66889999999999999999999999773332211 1 1222


Q ss_pred             CCCCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-----hccHH
Q 010250          330 SIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-----ERNIV  401 (514)
Q Consensus       330 gv~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-----~~~~~  401 (514)
                      .-.++++   ++||.++-.++++|++++++++++.+...       ..  .+..+.+.+.++.+.+....     -++..
T Consensus       208 ~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~~l~~~-------~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  278 (363)
T PF00155_consen  208 DEDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIERLRRF-------QR--SGLSSSPMQAAAAAALSDPELVEKWLEELR  278 (363)
T ss_dssp             TTTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHHHHHHH-------HH--HTTSSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccceeeeeccccccccccccccccchhhhhhhhhhc-------cc--cccccchhhHHHHHhhhcccccccccccch
Confidence            2233433   68998874338999999999999988742       22  22225555655555554332     13456


Q ss_pred             HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee-----CCE
Q 010250          402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS-----GDN  475 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~-----g~~  475 (514)
                      ++++++.+++.+.|++.   .+.......|.++++.+...            ....+.+.|+++ ||.+.++     .++
T Consensus       279 ~~l~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~L~~~~gi~v~pg~~~~~~~~  343 (363)
T PF00155_consen  279 ERLRENRDLLREALEEI---GITVLPPEAGFFLWVRLDPN------------DAEELAQELLEEYGILVRPGSYFGVPGY  343 (363)
T ss_dssp             HHHHHHHHHHHHHHHHT---TSEEEHHSBSSEEEEEESHH------------HHHHHHHHHHHHHTEEEEEGGGGTSTTE
T ss_pred             hhHHHHHHHHHHHHHHh---hhheeeccCccEEEEEcccc------------hHHHHHHHHHHhCCEEEEecCCCCCCCE
Confidence            77888888888888765   22111112455566666532            145688889988 9999974     357


Q ss_pred             EEEeCCCCCCHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKY  496 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l  496 (514)
                      ||++. ..+++|++++++++|
T Consensus       344 iRi~~-a~~~~e~~~~~~~~l  363 (363)
T PF00155_consen  344 IRISL-ASHSEEDLEEALERL  363 (363)
T ss_dssp             EEEEG-GCSCHHHHHHHHHHH
T ss_pred             EEEEe-ccCCHHHHHHHHhhC
Confidence            99996 589999999999886

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>TIGR01814 kynureninase kynureninase

Probab=99.80  E-value=2.8e-17  Score=170.83  Aligned_cols=340  Identities=17%  Similarity=0.150  Sum_probs=199.2

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-c-cccc---cCCchHHHHHHHHHHhcCcCCCCeEEEeCChh
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-H-SFWN---RTTKPSLDLAKELLEMFTASKMAKVFFTNSGS  172 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~-~~~~---~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGs  172 (514)
                      ++..|||..+      +|..++.+.+++.+.++..... + ....   .......++ +++ ++++ ...++++|++|+|
T Consensus        26 ~~~iyld~~a------~g~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~l~g-~~~~~v~~~~~~t   96 (406)
T TIGR01814        26 NAVIYLDGNS------LGLMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESL-LKL-RLVG-AKEDEVVVMNTLT   96 (406)
T ss_pred             CCcEEecCCC------cCcCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhh-ccc-cccC-CCCCcEEEeCCch
Confidence            3457788533      4445788889988777542211 0 1000   011222223 334 6654 3567899999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee----ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCC
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA----SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET  248 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~----~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (514)
                      +++..+++..+.    .+ .++..|++.+..|... ...+    ...|....        .....++....         
T Consensus        97 ~~l~~~~~~~~~----~~-~~~~~i~~~~~~~~s~-~~~~~~~~~~~g~~~~--------~~~~~~~~~~~---------  153 (406)
T TIGR01814        97 INLHLLLASFYK----PT-PKRYKILLEAKAFPSD-HYAIESQLQLHGLTVE--------ESMVQIEPREE---------  153 (406)
T ss_pred             HHHHHHHHHhcC----Cc-CCccEEEecCCCCChH-HHHHHHHHHhcCCCcc--------cceEEeccCCC---------
Confidence            999998876520    01 1123455444555432 1111    11111100        00000111000         


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecc
Q 010250          249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK  328 (514)
Q Consensus       249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~  328 (514)
                          ...+.+++++.+.+.. +++++|+++.+++.+|.+.|    +++|.++|++||+++++|++|+ +|..  .+..+.
T Consensus       154 ----g~~~~~~l~~~~~~~~-~~t~lv~~~~v~~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~-~G~~--~id~~~  221 (406)
T TIGR01814       154 ----ETLRLEDILDTIEKNG-DDIAVILLSGVQYYTGQLFD----MAAITRAAHAKGALVGFDLAHA-VGNV--PLDLHD  221 (406)
T ss_pred             ----CccCHHHHHHHHHhcC-CCeEEEEEeccccccceecC----HHHHHHHHHHcCCEEEEEcccc-cCCc--cccccc
Confidence                0011466777665432 46889999999999999998    9999999999999999999998 5544  223333


Q ss_pred             cCCCCchhch--hhhhcCCcccceeEEeCHHHHHHhhhccCCCCc--------ccccCC----------CCCcHHHHHHH
Q 010250          329 YSIKPDLVSF--AKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS--------FSHGFT----------YSGHPVSCAVA  388 (514)
Q Consensus       329 ~gv~pDiv~~--sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~--------~~~~~t----------~~~~pl~~aaa  388 (514)
                      +|  +|++++  .|+|.|| .. |+++.+++..+.+.+..  .+.        +....+          .+.|..++++.
T Consensus       222 ~g--vD~~~~s~hK~l~g~-pG-~~l~v~~~~~~~~~p~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l  295 (406)
T TIGR01814       222 WG--VDFACWCTYKYLNAG-PG-AGAFVHEKHAHTERPRL--AGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAAL  295 (406)
T ss_pred             CC--CCEEEEcCccccCCC-CC-eEEEEehhhhhhcCCCC--CcccCCCCccccccccccCCCccceeeCCccHHHHHHH
Confidence            34  566654  4999876 34 55555544333332210  000        000001          12345677777


Q ss_pred             HHHHHHHhhc---cHHHHHHHHHHHHHhhhhhccC----CCcee--EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHH
Q 010250          389 IEALKIYKER---NIVEQVNKIAPKFQDGVKAFSD----SPIIG--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFG  459 (514)
Q Consensus       389 ~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~----~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~  459 (514)
                      .++|+.+.+.   ...++.+.+.+++++.|+++..    ..+..  +....+.++.+.+. ..            ...+.
T Consensus       296 ~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~~------------~~~~~  362 (406)
T TIGR01814       296 RGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-VP------------GKAVF  362 (406)
T ss_pred             HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-CC------------HHHHH
Confidence            7899988653   4577888888888888876421    11111  11223455666654 11            34577


Q ss_pred             HHHHHCCcEEEeeC-CEEEEeC-CCCCCHHHHHHHHHHHHHHH
Q 010250          460 AQCEKHGMLVRVSG-DNIMMSP-PFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       460 ~~l~~~Gv~~~~~g-~~iRi~p-~~~~t~e~id~~~~~l~~~l  500 (514)
                      +.|.++||++...+ +.||++| ++.+|++||++++++|++.+
T Consensus       363 ~~L~~~gi~v~~~~~~~iRiS~~~~~nt~~did~l~~~l~~~~  405 (406)
T TIGR01814       363 QALIKRGVIGDKREPSVIRVAPVPLYNTFVDVYDAVNVLEEIL  405 (406)
T ss_pred             HHHHHCCEEEeccCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence            88899999887554 5799999 78999999999999998764

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.80  E-value=3.7e-17  Score=168.63  Aligned_cols=338  Identities=17%  Similarity=0.201  Sum_probs=194.8

Q ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHH---HHhcCcCCCCeEEEeCChhHHHHH
Q 010250          102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKEL---LEMFTASKMAKVFFTNSGSEANDT  177 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L---~~~~~~~~~~~v~~~~sGseA~~~  177 (514)
                      |||..++.      ..++.|++++.+.++... ..++...........+.+.+   .+.+.....++++|++|++|++..
T Consensus         2 yld~aa~~------~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~i~~t~g~teal~~   75 (382)
T TIGR03403         2 YLDNNATT------MLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLDDIIITSCATESNNW   75 (382)
T ss_pred             cccCcCCC------CCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHH
Confidence            77765553      257899999998886521 11111111111223333333   333322245799999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceee--eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA--ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~--~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      +++.+..-  ....+++++|++....|+......  +...|..            +..++.++.+.             .
T Consensus        76 ~~~~~~~~--~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~------------v~~v~~~~~g~-------------~  128 (382)
T TIGR03403        76 VLKGVYFD--EILKGGKNHIITTEVEHPAVRATCAFLESLGVE------------VTYLPINEQGT-------------I  128 (382)
T ss_pred             HHHHHHHh--hcccCCCCEEEEcCCccHHHHHHHHHHHHCCCE------------EEEEecCCCCC-------------C
Confidence            99865310  001133456777654443322111  1111111            11111111100             1


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL  335 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi  335 (514)
                      +.+++++.+.    +++.+|++..+++.+|.+.|    +++|.++|++||+++|+|++|. +|..    ..+.....+|+
T Consensus       129 d~~~l~~~i~----~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~~ivD~a~~-~g~~----~~~~~~~~~D~  195 (382)
T TIGR03403       129 TAEQVREAIT----EKTALVSVMWANNETGMIFP----IKEIGEICKERGVLFHTDAVQA-IGKI----PVDVQKAGVDF  195 (382)
T ss_pred             CHHHHHHhcc----cCCeEEEEEcccCCCccccC----HHHHHHHHHHcCCEEEEechhh-cCCC----ccCccccCCCE
Confidence            1466666664    34567888888888999888    8999999999999999999987 4322    12222334688


Q ss_pred             hchh--hhhcCCcccceeEEeCHHHHHHhhhc---cCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHH
Q 010250          336 VSFA--KALSSAYMPIGAILVSPEVSEVIHSQ---SNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIA  408 (514)
Q Consensus       336 v~~s--K~l~gG~~pig~v~~~~~i~~~l~~~---~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~  408 (514)
                      +++|  |.+ |. ..+|+++++++..  +.+.   ......+   ...+.|..+..++.++++...+  +...++++++.
T Consensus       196 ~~~s~~K~~-gp-~G~g~l~vr~~~~--~~p~~~g~~~~~~~---~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~  268 (382)
T TIGR03403       196 LSFSAHKFH-GP-KGVGGLYIRKGVE--LTPLFHGGEHMGGR---RSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLR  268 (382)
T ss_pred             EEEcchhhC-CC-CceEEEEECCCCC--CCCcccCCCCCCCc---ccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence            8777  953 32 3478888776541  1110   0000001   1234556666666777776543  33457788888


Q ss_pred             HHHHhhhhhccCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------------
Q 010250          409 PKFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---------------  472 (514)
Q Consensus       409 ~~l~~~L~~l~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------------  472 (514)
                      +++.++|+++....+..... ..+.++.+.+....            ...+...|.++||.++.+               
T Consensus       269 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~  336 (382)
T TIGR03403       269 DRLEDALLELPDVFVVGDREHRVPNTILISIKGVE------------GEAMLWDLNKAGIAASTGSACASEDLEANPVMV  336 (382)
T ss_pred             HHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCCC------------HHHHHHhhccCCEEEEchhccCCCCCCcCHHHH
Confidence            88888887652221211110 11234445443211            334666788999999842               


Q ss_pred             ---------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          473 ---------GDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       473 ---------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                               +..||++++..+|++|||++++.|++++++++
T Consensus       337 ~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~  377 (382)
T TIGR03403       337 AIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR  377 (382)
T ss_pred             HcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                     13599999999999999999999999887654

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=99.79  E-value=3.1e-17  Score=168.65  Aligned_cols=322  Identities=17%  Similarity=0.136  Sum_probs=192.9

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccE
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK  196 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~  196 (514)
                      .+|.+.+++.+.+.........+.+..+...++.+.|+++++. +.+.++++++|++++..++..++.... .+ .+++.
T Consensus        32 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~-~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~-~~g~~  108 (373)
T TIGR03812        32 PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHL-PDAYGYIVSGGTEANIQAVRAAKNLAR-EE-KRTPN  108 (373)
T ss_pred             chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCC-CCCCeEEeccHHHHHHHHHHHHHHHHh-cc-CCCcE
Confidence            6778888887776542111222222345557888899988843 335678899999999999876642110 01 12357


Q ss_pred             EEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 010250          197 FIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFI  276 (514)
Q Consensus       197 ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavi  276 (514)
                      |++.+++|..... .....|...            ..++.+..+             ..+++++++.+..   ++++.++
T Consensus       109 vl~~~~~h~~~~~-~~~~~G~~~------------~~v~~~~~~-------------~~d~~~l~~~l~~---~~~~vv~  159 (373)
T TIGR03812       109 IIVPESAHFSFEK-AAEMLGLEL------------RYAPLDEDY-------------TVDVKDVEDLIDD---NTIGIVG  159 (373)
T ss_pred             EEECCcchHHHHH-HHHHcCCeE------------EEEeeCCCC-------------CcCHHHHHHHHhh---CcEEEEE
Confidence            8877776655321 111112111            111111111             1125677777653   3356677


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--c-c---eecccCCCCchhchh--hhhcCCccc
Q 010250          277 AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--M-F---GCDKYSIKPDLVSFA--KALSSAYMP  348 (514)
Q Consensus       277 vEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--~-~---~~~~~gv~pDiv~~s--K~l~gG~~p  348 (514)
                      +.| .++.|.+.|    +++|.++|++||+++|+|++|.++ ..+.  . .   .++..-...|.++++  |...++ .|
T Consensus       160 ~~~-~~~tG~~~~----~~~i~~l~~~~~~~livD~a~~~~-~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~-~~  232 (373)
T TIGR03812       160 IAG-TTELGQIDD----IEELSKIALENGIYLHVDAAFGGF-VIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSP-IP  232 (373)
T ss_pred             ECC-CCCCCccCC----HHHHHHHHHHcCCeEEEEcCchhH-HHHHHhcCCCCCCccccCCCCCEEEECccccCCCc-CC
Confidence            776 466788876    999999999999999999999744 1110  0 0   011110123554443  733333 67


Q ss_pred             ceeEE-eCHHHHHHhhhccCCCCcccccC-----CCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhcc
Q 010250          349 IGAIL-VSPEVSEVIHSQSNTLGSFSHGF-----TYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFS  419 (514)
Q Consensus       349 ig~v~-~~~~i~~~l~~~~~~~~~~~~~~-----t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~  419 (514)
                      .|+++ .++++.+.+....    ++..+.     ..+.++.+++++.++|+.+.++   +..+++.++.++|++.|+++ 
T Consensus       233 ~G~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-  307 (373)
T TIGR03812       233 AGGILFRSKSYLKYLSVDA----PYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI-  307 (373)
T ss_pred             ceEEEEeCHHHHhhhcccC----cccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence            87666 5778877664211    111111     1133456777788888877543   46788999999999999876 


Q ss_pred             CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--CCEEEEeCCCCCCHHHHHHHHHHHH
Q 010250          420 DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--GDNIMMSPPFIMSPEEVDELISKYG  497 (514)
Q Consensus       420 ~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--g~~iRi~p~~~~t~e~id~~~~~l~  497 (514)
                      ....+  ..+...++.+.+.+              ...+.+.|.++|++++..  ...||++++..+|++|++++++.|+
T Consensus       308 g~~~~--~~~~~~~v~~~~~~--------------~~~v~~~L~~~gi~v~~~~~~~~iRis~~~~~t~edid~l~~~L~  371 (373)
T TIGR03812       308 GFEPV--IEPVLNIVAFEVDD--------------PEEVRKKLRDRGWYVSVTRCPKALRIVVMPHVTREHIEEFLEDLK  371 (373)
T ss_pred             CCeEE--cCCCceEEEEEeCC--------------HHHHHHHHHHCCceeccCCCCCEEEEEEECCCCHHHHHHHHHHHh
Confidence            21111  11223344444321              234778899999999865  3579999998999999999999987


Q ss_pred             H
Q 010250          498 K  498 (514)
Q Consensus       498 ~  498 (514)
                      +
T Consensus       372 ~  372 (373)
T TIGR03812       372 E  372 (373)
T ss_pred             h
Confidence            5

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=99.79  E-value=7.1e-17  Score=167.15  Aligned_cols=336  Identities=13%  Similarity=0.079  Sum_probs=199.8

Q ss_pred             eCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc---CCC-CeEEEeCCh
Q 010250           96 DVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA---SKM-AKVFFTNSG  171 (514)
Q Consensus        96 d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~---~~~-~~v~~~~sG  171 (514)
                      +..|+.++||..|.  ..++ .++.+.+++.+.+.....|... .+..+....+++.+.+.+..   .+. +++++++|+
T Consensus        24 ~~~~~~~i~l~~~~--p~~~-~~~~~~~a~~~~~~~~~~Y~~~-~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga   99 (393)
T TIGR03538        24 PPASKPPIALSIGE--PKHP-TPAFVLEALRENLHGLSTYPTT-KGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGT   99 (393)
T ss_pred             hhcCCCeEEecCCC--CCCC-CCHHHHHHHHHHhhccCCCCCC-CCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCc
Confidence            34688899988774  3344 4788999998876543333211 22334444555555444321   234 379999999


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCCc-cEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCCCCC
Q 010250          172 SEANDTQVKLVWYYNNALGRPNK-KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGET  248 (514)
Q Consensus       172 seA~~~Alk~a~~~~~~~~~~~~-~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  248 (514)
                      ++|+..++++..       .++. ..|++.+++|.+........ |...            ..+++..  .|.       
T Consensus       100 ~~al~~~~~~l~-------~~gd~~~vlv~~P~y~~~~~~~~~~-g~~~------------~~v~~~~~~~~~-------  152 (393)
T TIGR03538       100 REALFAFAQAVI-------NPGQAPLVVMPNPFYQIYEGAALLA-GAEP------------YFLNCTAENGFL-------  152 (393)
T ss_pred             HHHHHHHHHHHc-------CCCCcceEEecCCCCcchHHHHHhc-CCeE------------EEeeccccCCCC-------
Confidence            999999988763       1333 24888899997764322211 1111            0111100  010       


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc-cc-e-
Q 010250          249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MF-G-  325 (514)
Q Consensus       249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~-~~-~-  325 (514)
                            .+.+++++.+.+   +..+.+++.| ++.+|.+ .+.+.+++|.++|++||+++|.||+|..+...+. .. . 
T Consensus       153 ------~d~~~l~~~~~~---~~k~i~l~~p-~NPtG~~-~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~  221 (393)
T TIGR03538       153 ------PDFDAVPESVWR---RCQLLFVCSP-GNPTGAV-LSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGL  221 (393)
T ss_pred             ------CCHHHHHHHHhh---cceEEEEeCC-CCCcCcc-cCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCH
Confidence                  013566665542   2234445555 5556654 4678999999999999999999999987643321 11 0 


Q ss_pred             ---ecccCC--CCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-
Q 010250          326 ---CDKYSI--KPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-  396 (514)
Q Consensus       326 ---~~~~gv--~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-  396 (514)
                         ....+.  .+.++   +|||.++..++++|++++++++++.+...       ....+++.+++.+.++.+++..-+ 
T Consensus       222 ~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~  294 (393)
T TIGR03538       222 LQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILKAFLRY-------RTYHGCAMPIPTQLASIAAWNDEQH  294 (393)
T ss_pred             HHhcccccccccccEEEEecchhhcCCcccceEEEecCHHHHHHHHHH-------HHhhccCcCHHHHHHHHHHhcChHH
Confidence               111111  12232   68997654449999999999998887631       111244556777777777663210 


Q ss_pred             hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee---
Q 010250          397 ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS---  472 (514)
Q Consensus       397 ~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~---  472 (514)
                      -+...+.++++.+.+.+.|++.  .++  .....|.++++++.. .            ...+.+.|+ ++||.+.++   
T Consensus       295 ~~~~~~~~~~~~~~~~~~L~~~--~~~--~~p~gg~f~~~~~~~-~------------~~~~~~~l~~~~gV~v~pg~~f  357 (393)
T TIGR03538       295 VRENRALYREKFAAVLEILGQV--LDL--ELPDAGFYLWPKVPG-D------------DEAFARALYEEENVTVLPGRFL  357 (393)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhh--Ccc--cCCCeeEEEEEECCC-C------------HHHHHHHHHHHCCEEEeCCccc
Confidence            0123455666666676766653  111  123346777887751 0            234667765 589998643   


Q ss_pred             ----------CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250          473 ----------GDNIMMSPPFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       473 ----------g~~iRi~p~~~~t~e~id~~~~~l~~~  499 (514)
                                .+.+||+  +..+++++++++++|.+.
T Consensus       358 ~~~~~~~~~~~~~~Ris--~~~~~~~l~~~l~~l~~~  392 (393)
T TIGR03538       358 AREAEGVNPGEGRVRIA--LVAPLEECVEAAERIRSF  392 (393)
T ss_pred             cccccCCCCCCCEEEEE--ecCCHHHHHHHHHHHHHh
Confidence                      1469999  566899999999998764

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.79  E-value=2.4e-18  Score=169.02  Aligned_cols=327  Identities=18%  Similarity=0.194  Sum_probs=216.9

Q ss_pred             EEEccCCcccccCCC--CCHHHHHHHHHHHhcCCccc---cccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250          102 YLDSLAGLWCTALGG--SEPRLVAAATAQLNTLPFYH---SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND  176 (514)
Q Consensus       102 ylD~~s~~~~~~lGh--~~p~v~~A~~~~l~~~~~~~---~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~  176 (514)
                      .|++.|-   |+||+  ++-...+++.+.++++....   ..-.++.+.+.++++..++++   +.+..+.++-|..+|.
T Consensus       138 ~lNlgSY---NYLGFa~~~g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~---g~e~a~vF~mGf~TNs  211 (519)
T KOG1357|consen  138 CLNLGSY---NYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFL---GVEDAIVFSMGFATNS  211 (519)
T ss_pred             eeeeccc---ccccccccCCcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhc---CCcceEEEeccccccc
Confidence            4554333   66665  33334444445555543321   122357788999999999987   3455666666776666


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL  256 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (514)
                      .-+-..         -++...|..+.--|++......+||....                              -|.|++
T Consensus       212 ~~~p~l---------~~~gsLIiSDelNHaSi~~GaRLSgAtiR------------------------------VfkHNd  252 (519)
T KOG1357|consen  212 MNIPSL---------LGKGSLIISDELNHASLITGARLSGATTR------------------------------VFRHND  252 (519)
T ss_pred             cCccee---------ecCCcceeeccccchheeccccccCceEE------------------------------EEecCC
Confidence            555433         24556777788889988777777765331                              256777


Q ss_pred             HHHHHHHHHHh---------CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-C-cccccccce
Q 010250          257 ANNLEDLILKE---------GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-A-FGRLGTMFG  325 (514)
Q Consensus       257 ~~~le~li~~~---------~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G-~gr~G~~~~  325 (514)
                      +.+||+++.+.         .+.+.-.|++|.+.++.|.++.    |+++.++++||.++|+.||+|+ | .|++| ++.
T Consensus       253 m~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~----Lp~vvalkkkykayl~lDEAHSiGA~g~tG-rgv  327 (519)
T KOG1357|consen  253 MQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD----LPEVVALKKKYKAYLYLDEAHSIGAMGATG-RGV  327 (519)
T ss_pred             HHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc----cHHHHHhhccccEEEEeeccccccccCCCC-cce
Confidence            89999998763         1335679999999999999998    8999999999999999999998 2 24555 557


Q ss_pred             ecccCCCC---chh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---
Q 010250          326 CDKYSIKP---DLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---  397 (514)
Q Consensus       326 ~~~~gv~p---Div--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---  397 (514)
                      ++++|++|   ||+  +|-|++++++   |++.+++++++.+...+     -.+.+....+|..+...+.+++++..   
T Consensus       328 ce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk~lid~lrt~s-----~~~~yat~~sppvaqq~~ssl~~i~G~dg  399 (519)
T KOG1357|consen  328 CEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSKELIDYLRTPS-----PSALYATSLSPPVAQQILTSVKHIMGEDG  399 (519)
T ss_pred             eeccCCCchhheeecceehhhccccc---ceecCcHHHHhhhccCC-----CceeecccCChHHHHHHHHHHHhhcCCCc
Confidence            88898875   333  6778887654   67889999999987431     12223334456677777888887763   


Q ss_pred             ----ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC
Q 010250          398 ----RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG  473 (514)
Q Consensus       398 ----~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g  473 (514)
                          ++..+++.++..+++..|+..   .++..-........+.+-..           .....+.+.|+++++.+...+
T Consensus       400 t~~g~~k~~~l~~ns~yfr~~l~~~---gfivyG~~dSpVvplll~~~-----------~k~~~f~r~~l~~nigvVvvg  465 (519)
T KOG1357|consen  400 TNRGRQKIERLAENSRYFRWELQKM---GFIVYGNNDSPVVPLLLYGP-----------AKIVAFSREMLERNIGVVVVG  465 (519)
T ss_pred             ccHHHHHHHHHHhhhHHHHHhhhcC---cEEEecCCCCCcceeeecCc-----------ccccHHHHHHHhcCceEEEEe
Confidence                234678888888998888764   11111111111111111111           112347788998887765332


Q ss_pred             --------CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          474 --------DNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       474 --------~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                              ...|++.+..+|.|++|++++.+++.=
T Consensus       466 fPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g  500 (519)
T KOG1357|consen  466 FPATPLLESRARFCLSASHTKEDLDRALEVIDRVG  500 (519)
T ss_pred             CCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhc
Confidence                    347888889999999999999887653

>PRK09265 aminotransferase AlaT; Validated

Probab=99.79  E-value=8.1e-17  Score=167.28  Aligned_cols=344  Identities=16%  Similarity=0.201  Sum_probs=203.2

Q ss_pred             CCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-----cCCCCeEEEeCC
Q 010250           97 VNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-----ASKMAKVFFTNS  170 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-----~~~~~~v~~~~s  170 (514)
                      ..|+..+||..|.. ..+++ .++++.+++.+.+.....|..     .....+|.+.+++++.     +...++|+++++
T Consensus        30 ~~~~~~i~l~~g~p-~~~~~~~~~~i~~~~~~~~~~~~~Y~~-----~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G  103 (404)
T PRK09265         30 EEGHKILKLNIGNP-APFGFEAPDEILRDVIRNLPTAQGYSD-----SKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNG  103 (404)
T ss_pred             HcCCCeEEecCCCC-CcCCCCCCHHHHHHHHHHhhcCCCCCC-----CCCcHHHHHHHHHHHhccCCCCCCcccEEEeCC
Confidence            35778899988743 34565 477899998887654322211     1122355566666542     235678999999


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250          171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE  250 (514)
Q Consensus       171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (514)
                      +++++..+++...        ..++.|++.+++|..........+....             .+++...          +
T Consensus       104 ~~~~l~~~~~~~~--------~~gd~Vlv~~p~y~~~~~~~~~~g~~~v-------------~~~~~~~----------~  152 (404)
T PRK09265        104 VSELIVMAMQALL--------NNGDEVLVPAPDYPLWTAAVSLSGGKPV-------------HYLCDEE----------A  152 (404)
T ss_pred             hHHHHHHHHHHhC--------CCCCEEEEeCCCCcChHHHHHHcCCEEE-------------EEecccc----------c
Confidence            9999998887653        3356899999999765433222211111             0000000          0


Q ss_pred             HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250          251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS  330 (514)
Q Consensus       251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g  330 (514)
                      .+ ..+.+++++.+.   ++..+.+++.| ++.+|.+. +.+.+++|.++|++||+++|+||++..|-..+.... ....
T Consensus       153 ~~-~~d~~~l~~~~~---~~~~~v~l~~P-~NPtG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~-~~~~  225 (404)
T PRK09265        153 GW-FPDLDDIRSKIT---PRTKAIVIINP-NNPTGAVY-SKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHI-SIAS  225 (404)
T ss_pred             CC-CCCHHHHHHhcc---ccceEEEEECC-CCCCCcCC-CHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcC-CHHH
Confidence            00 011456666553   23334555666 55667655 567899999999999999999999987743332110 1111


Q ss_pred             CCCc--hh---chhhhhcCCcccceeEEe--CHHH----HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-c
Q 010250          331 IKPD--LV---SFAKALSSAYMPIGAILV--SPEV----SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-R  398 (514)
Q Consensus       331 v~pD--iv---~~sK~l~gG~~pig~v~~--~~~i----~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~  398 (514)
                      ..++  ++   +|||.++..++++|++++  ++++    ++.+..        ....+++.+.++..++.++|...+. +
T Consensus       226 ~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~~~~~~~  297 (404)
T PRK09265        226 LAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDM--------LASMRLCANVPAQHAIQTALGGYQSIN  297 (404)
T ss_pred             cCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHH--------HhccccCCCcHHHHHHHHHhcCchhHH
Confidence            1222  22   589998654499999996  3443    333321        1112345667777777777742111 1


Q ss_pred             cHH---HHHHHHHHHHHhhhhhccCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--
Q 010250          399 NIV---EQVNKIAPKFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--  472 (514)
Q Consensus       399 ~~~---~~~~~~~~~l~~~L~~l~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--  472 (514)
                      .+.   +++.++.+.+.+.|+++   +.+.... .-|.++++.+.......      ....+.+...|.++||.+.++  
T Consensus       298 ~~~~~~~~~~~~r~~~~~~L~~~---~~~~~~~p~~g~~l~~~~~~~~~~~------~~~~~~~~~~l~~~gv~v~pg~~  368 (404)
T PRK09265        298 ELILPGGRLYEQRDRAWELLNAI---PGVSCVKPKGALYAFPKLDPKVYPI------HDDEQFVLDLLLQEKVLLVQGTG  368 (404)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcC---CCCcccCCCcceEEEEEecccccCC------CCHHHHHHHHHHhCCEEEECchh
Confidence            121   34555666677777654   2222222 23667777775421100      011344667888999999864  


Q ss_pred             -----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          473 -----GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       473 -----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                           .+.+|++  +..++|++++++++|.++++..
T Consensus       369 F~~~~~~~~Ri~--~~~~~e~l~~~l~rl~~~l~~~  402 (404)
T PRK09265        369 FNWPEPDHFRIV--TLPRVDDLEEAIGRIGRFLSGY  402 (404)
T ss_pred             hCCCCCCeEEEE--eCCCHHHHHHHHHHHHHHHHHh
Confidence                 2469999  5678999999999999888643

>PRK05839 hypothetical protein; Provisional

Probab=99.79  E-value=1.7e-16  Score=163.16  Aligned_cols=329  Identities=11%  Similarity=-0.005  Sum_probs=193.0

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEAND  176 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~  176 (514)
                      .|+.++||..|..  .++ .++.+.+++.+.......|.. ..+..+....+++.+.+.++ ....++|++++|+.+|+.
T Consensus        22 ~~~~~i~l~~~~p--~~~-~~~~~~~a~~~~~~~~~~Y~~-~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~   97 (374)
T PRK05839         22 KEYKGLDLTIGEP--QFE-TPKFIQDALKNNAHLLNKYPK-SAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLF   97 (374)
T ss_pred             CCCCeEEcCCCCC--CCC-CCHHHHHHHHHHhhccCCCCC-CCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHH
Confidence            4889999988753  456 367888888776644322321 12233444556666655543 235689999999999998


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYST  254 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  254 (514)
                      .++++..      ..++.+.|++.+++|.+........ |...            ..++..  +.|..+           
T Consensus        98 ~~~~~~~------~~~~gd~vlv~~P~y~~~~~~~~~~-g~~v------------~~v~~~~~~~~~~d-----------  147 (374)
T PRK05839         98 NFPQFVL------FDKQNPTIAYPNPFYQIYEGAAIAS-RAKV------------LLMPLTKENDFTPS-----------  147 (374)
T ss_pred             HHHHHHh------cCCCCCEEEECCCCchhhHHHHHhc-CCEE------------EEeecccccCCcCC-----------
Confidence            8777542      1123567889999998764333222 1111            011110  001100           


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee-ccc---C
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKY---S  330 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~-~~~---g  330 (514)
                        ..+  ..+.    +..+.+++.|. +.+|.+. +++.+++|.++|++||+++|+||+|..|...+..... ...   +
T Consensus       148 --~~~--~~~~----~~k~v~i~nP~-NPTG~~~-s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~~~~~~~  217 (374)
T PRK05839        148 --LNE--KELQ----EVDLVILNSPN-NPTGRTL-SLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLEASILVG  217 (374)
T ss_pred             --cch--hhhc----cccEEEEeCCC-CCcCccc-CHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhhhhcccC
Confidence              011  1111    22344555554 5556544 5788999999999999999999999877322221111 100   0


Q ss_pred             C-C-Cchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHH
Q 010250          331 I-K-PDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQV  404 (514)
Q Consensus       331 v-~-pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~  404 (514)
                      . . +.++   +|||.++..++++|++++++++++.+...       ....+++.+.+.+.++.+++..-+ -+.+.+++
T Consensus       218 ~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~  290 (374)
T PRK05839        218 NESFKNVLVINSISKRSSAPGLRSGFIAGDASILKKYKAY-------RTYLGCASPLPLQKAAAVAWLDDEHAEFFRNIY  290 (374)
T ss_pred             ccccCcEEEEeccccccCCccceeEEEecCHHHHHHHHHH-------HhhcCCCCChHHHHHHHHHhccchHHHHHHHHH
Confidence            1 1 2333   68998655449999999999998887631       111233445556666655553100 01234444


Q ss_pred             HHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee---------CC
Q 010250          405 NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS---------GD  474 (514)
Q Consensus       405 ~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~---------g~  474 (514)
                      +++.+.+.+.|.    ..    ...-|.++++.+.+              ...++.+|++ +||.+.++         .+
T Consensus       291 ~~~~~~~~~~l~----~~----~p~gg~fi~~~~~~--------------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~  348 (374)
T PRK05839        291 AKNLKLAREILG----IT----IPPATFYVWLPVDN--------------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKG  348 (374)
T ss_pred             HHHHHHHHHhcC----CC----CCCeeEEEEEeCCC--------------hHHHHHHHHHHCCEEEeCchhhCCCCCCCC
Confidence            444444444331    11    22346777777642              2346777764 99999873         15


Q ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          475 NIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       475 ~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      ++|++  +..+++++.+++++|.++++
T Consensus       349 ~iRis--~~~~~~~~~~~l~~l~~~l~  373 (374)
T PRK05839        349 YVRIA--LVYDTPKLEKALEIIKTYLE  373 (374)
T ss_pred             eEEEE--ecCCHHHHHHHHHHHHHHhh
Confidence            79999  55689999999999998764

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.79  E-value=1.3e-16  Score=162.93  Aligned_cols=327  Identities=14%  Similarity=0.101  Sum_probs=188.7

Q ss_pred             CEEEEccCCcccccCCCC--CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGS--EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT  177 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~--~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~  177 (514)
                      +.+|+.. |.. .+||-+  +|++++++.+.++.+       ....+...++++++++++   +.+++++++||++|+..
T Consensus         8 ~~~ina~-g~~-t~~g~s~~~~~v~~a~~~~~~~~-------~~~~~~~~~~~~~~a~~~---g~~~~~~~~g~t~al~~   75 (363)
T TIGR01437         8 KKVINAS-GKM-TILGVSTVSDEVADAQKRGAQNY-------FEIKELVNKTGEYIANLL---GVEDAVIVSSASAGIAQ   75 (363)
T ss_pred             ceEEECC-cEe-ecCCCCCCCHHHHHHHHHHHhcC-------CCHHHHHHHHHHHHHHhh---CCCeEEEEcCHHHHHHH
Confidence            4566643 333 778875  899999999987653       124466778889999887   34689999999999999


Q ss_pred             HHHHHHHHHhhcCC-----------CCccEEEEEecCCcccc---eeeeecCCCccccCCCCCCCCcccccCCCCcccCC
Q 010250          178 QVKLVWYYNNALGR-----------PNKKKFIARQKSYHGST---LIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYA  243 (514)
Q Consensus       178 Alk~a~~~~~~~~~-----------~~~~~ii~~~~~yHG~t---~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (514)
                      +++.+..    .|.           -.++.||+..+.|....   ...+.++|....            .++..  +   
T Consensus        76 al~al~~----~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v------------~v~~~--~---  134 (363)
T TIGR01437        76 SVAAVIT----RGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVV------------EAGYA--N---  134 (363)
T ss_pred             HHHHHhc----CCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEE------------EEcCC--C---
Confidence            9987641    110           01235666654443221   111111221110            01110  0   


Q ss_pred             CCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc
Q 010250          244 HPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM  323 (514)
Q Consensus       244 ~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~  323 (514)
                                ..+++++++++.   +++.+++++....+..|.+.+    +++|.++|++||+++|+|++|. .  ... 
T Consensus       135 ----------~~d~~~le~ai~---~~t~ai~~v~~~~~~~g~~~~----~~~i~~~a~~~gi~vivD~a~~-~--~~~-  193 (363)
T TIGR01437       135 ----------ECSAEQLEAAIT---EKTAAILYIKSHHCVQKSMLS----VEDAAQVAQEHNLPLIVDAAAE-E--DLQ-  193 (363)
T ss_pred             ----------CCCHHHHHHhcC---hhceEEEEEecCCCCcCCcCC----HHHHHHHHHHcCCeEEEECCCC-C--chH-
Confidence                      012577888775   233344445544445566666    8999999999999999999996 2  100 


Q ss_pred             ceecccCCCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--cc
Q 010250          324 FGCDKYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RN  399 (514)
Q Consensus       324 ~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~  399 (514)
                       ....+|  .|++++|  |.|+|  +..|++++++++++.+......     .+..+.......++..++++.+.+  .+
T Consensus       194 -~~~~~g--~D~~~~S~~K~l~g--p~~G~l~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~gl~aAl~~~~~~~~~  263 (363)
T TIGR01437       194 -KYYRLG--ADLVIYSGAKAIEG--PTSGLVLGKKKYIEWVKLQSKG-----IGRAMKVGKENILGLTAALEQYLSTGKE  263 (363)
T ss_pred             -HHHHcC--CCEEEEeCCcccCC--CceEEEEEcHHHHHHHHhccCC-----CcceeccCHHHHHHHHHHHHHHHccCcc
Confidence             011123  4877665  98976  4688888888888776431110     001111111234444455665543  23


Q ss_pred             HHHHHHHHHHHHHhhhhhccCCCceeEEEeeee---eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC--cEEEe---
Q 010250          400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGL---ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG--MLVRV---  471 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G--v~~~~---  471 (514)
                      ..+...++.++++++|+++............+.   ...+.|.......        ....+.+.|.++|  |.+++   
T Consensus       264 ~~~~~~~~~~~l~~~L~~i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g~--------~~~~l~~~L~~~~~~I~~r~~~~  335 (363)
T TIGR01437       264 SGAEMVAKLTPFIEALNTLKGVSASIVQDEAGRDIARAEIRFDESELGM--------TAADVVQALRQGEPAIYTRGYKA  335 (363)
T ss_pred             cHHHHHHHHHHHHHHHhcCCCeEEEEecCCCCCcCceEEEEEeccCCCC--------CHHHHHHHHhcCCCCEEEeeeee
Confidence            444555566678888887632222111111111   1223333211000        1456888888777  77764   


Q ss_pred             eCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250          472 SGDNIMMSPPFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       472 ~g~~iRi~p~~~~t~e~id~~~~~l~~~  499 (514)
                      ..+.+||.|+ +.+++|++.++++|++.
T Consensus       336 ~~~~~~l~~~-~~~~~e~~~~~~~l~~~  362 (363)
T TIGR01437       336 NEGIIEIDPR-SVTGGQLDIIVERIREI  362 (363)
T ss_pred             cCCeEEEEee-cCCHHHHHHHHHHHHHh
Confidence            2356999987 57799999999999875

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=99.78  E-value=2.9e-17  Score=166.31  Aligned_cols=306  Identities=14%  Similarity=0.115  Sum_probs=197.7

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV  179 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al  179 (514)
                      .+++||.+|.  +++|...+.+..   ..+..   |      +... .+|.+.|++.++-...++|++++|++|++....
T Consensus        24 ~~~i~ls~Ne--np~~~~~~~~~~---~~~~~---Y------p~~~-~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~   88 (339)
T PRK06959         24 DAWLDLSTGI--NPHGYPVPPVPA---DAWRR---L------PEDD-DGLAACAARYYGAPDAAHVLPVAGSQAAIRALP   88 (339)
T ss_pred             hhhceeccCC--CCCCCCCCCCCH---HHHHh---C------CCch-HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHH
Confidence            5689999887  788876333321   22222   1      3233 789999999885434579999999999987554


Q ss_pred             HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250          180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN  259 (514)
Q Consensus       180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (514)
                      .+.        .+  .+|++.+++|.+........+. ..              ++.|.                   ++
T Consensus        89 ~~~--------~~--g~v~v~~P~y~~y~~~~~~~g~-~~--------------~~v~~-------------------~~  124 (339)
T PRK06959         89 ALL--------PR--GRVGIAPLAYSEYAPAFARHGH-RV--------------VPLDE-------------------AA  124 (339)
T ss_pred             Hhc--------CC--CeEEEcCCCcHHHHHHHHHCCC-EE--------------Eeecc-------------------cc
Confidence            322        13  3488899999876433332221 11              00110                   00


Q ss_pred             HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh---
Q 010250          260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV---  336 (514)
Q Consensus       260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv---  336 (514)
                       +. +.+   ....++++.|. +.+|.+. +.+.++++.+.|+++++++|+||+|..|... ... ....+ .++++   
T Consensus       125 -~~-~~~---~~~~v~l~nPn-NPTG~~~-s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~-~s~-~~~~~-~~~vi~l~  194 (339)
T PRK06959        125 -DT-LPA---ALTHLIVVNPN-NPTAERL-PAARLLRWHAQLAARGGTLIVDEAFADTLPA-ASL-AAHTD-RPGLVVLR  194 (339)
T ss_pred             -hh-ccc---cCCEEEEeCCC-CCCCCCC-CHHHHHHHHHHHHHcCCEEEEECCCccCCCc-ccc-hhccC-CCCEEEEe
Confidence             11 110   11357888885 5556554 5567888888899999999999999877321 111 11111 23433   


Q ss_pred             chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhhh
Q 010250          337 SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDGV  415 (514)
Q Consensus       337 ~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L  415 (514)
                      +|||.++-.++++|++++++++++.+...         ...++.+.+++.++.++|+.-. .+...+.+++.++++.+.|
T Consensus       195 SfSK~~gl~GlRiGy~v~~~~li~~l~~~---------~~~~~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L  265 (339)
T PRK06959        195 SVGKFFGLAGVRAGFVLAAPALLAALRDA---------LGAWTVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALL  265 (339)
T ss_pred             cChhhcCCcchheEEEecCHHHHHHHHHh---------cCCCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence            79998873338999999999999998742         1245567788888888885311 1345677888888888888


Q ss_pred             hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--CEEEEeCCCCCCHHHHHHHH
Q 010250          416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEEVDELI  493 (514)
Q Consensus       416 ~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--~~iRi~p~~~~t~e~id~~~  493 (514)
                      +++ ....    ...+.++++.+.+              ...+.+.|.++||+++..+  ++||++  +..+++|+++++
T Consensus       266 ~~~-g~~~----~~~~~f~~~~~~~--------------~~~l~~~l~~~GI~vr~~~~~~~lRis--i~~~~~e~~~l~  324 (339)
T PRK06959        266 RAH-GFAV----HATPLFSWTDDPR--------------AAALHAALARRGIWTRYFAPPPSVRFG--LPADEAEWQRLE  324 (339)
T ss_pred             HHC-CCCc----cCcceEEEEeCCC--------------HHHHHHHHHhCCeEEEECCCCCeEEEE--CCCCHHHHHHHH
Confidence            876 2221    1234555555421              3457889999999998654  579999  446889999999


Q ss_pred             HHHHHHHHHHH
Q 010250          494 SKYGKALKATE  504 (514)
Q Consensus       494 ~~l~~~l~~~~  504 (514)
                      ++|++.++.+.
T Consensus       325 ~al~~~~~~~~  335 (339)
T PRK06959        325 DALAECVPTLA  335 (339)
T ss_pred             HHHHHHHHHHh
Confidence            99988776654

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=99.78  E-value=5.3e-17  Score=164.14  Aligned_cols=282  Identities=12%  Similarity=0.055  Sum_probs=176.3

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH  221 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~  221 (514)
                      +.+...+|.+.|++.+. ...++|++++|+++++..++.+..        +  .++++.+++|......+...+....  
T Consensus        38 p~~~~~~lr~~ia~~~~-~~~~~I~it~Gs~~~l~~~~~~~~--------~--~~vv~~~P~y~~y~~~~~~~G~~v~--  104 (332)
T PRK06425         38 PEISYTDIEDQIKIYTQ-GLKIKVLIGPGLTHFIYRLLSYIN--------V--GNIIIVEPNFNEYKGYAFTHGIRIS--  104 (332)
T ss_pred             cCcCHHHHHHHHHHHhC-CCcceEEECCCHHHHHHHHHHHhC--------C--CcEEEeCCChHHHHHHHHHcCCeEE--
Confidence            34456889999999874 456789999999999998886421        2  3688889999887544443322111  


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                                 .++... +     +.        +.+.    +.+.  +....+++.|.+ .+|.+. +.+.+++|.++|
T Consensus       105 -----------~vp~~~-~-----~~--------~~~~----l~~~--~~k~v~l~nP~N-PTG~~~-s~~~~~~l~~~a  151 (332)
T PRK06425        105 -----------ALPFNL-I-----NN--------NPEI----LNNY--NFDLIFIVSPDN-PLGNLI-SRDSLLTISEIC  151 (332)
T ss_pred             -----------EEeCCc-c-----cC--------cHHH----Hhhc--CCCEEEEeCCCC-CcCCcc-CHHHHHHHHHHH
Confidence                       111100 0     00        0122    2221  233455566654 555543 568899999999


Q ss_pred             HhcCCEEEEechhcCcccccccceecccCCCCchh---chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCC
Q 010250          302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV---SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT  377 (514)
Q Consensus       302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv---~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t  377 (514)
                      ++||+++|+||++..|...+..-......-.+.++   +|||.++ .| +++|++++++++++.+...         ...
T Consensus       152 ~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~G-lRiGy~v~~~~li~~l~~~---------~~~  221 (332)
T PRK06425        152 RKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPS-LRIGYIATDDYNMKISRKI---------TEP  221 (332)
T ss_pred             HHcCCEEEEecchhccccccchhHHHHhccCCCEEEEeecHHhcCCch-hhheeeecCHHHHHHHHHc---------CCC
Confidence            99999999999999884332111111111113333   6899888 55 8999999999999888742         123


Q ss_pred             CCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHH
Q 010250          378 YSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGA  456 (514)
Q Consensus       378 ~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~  456 (514)
                      +..+..++.+ +...+.-. .++..+.++++++++.+.|+++   ++.......|.++++.+.+              ..
T Consensus       222 ~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---g~~~~~~~~g~f~~~~~~~--------------~~  283 (332)
T PRK06425        222 WSVCDPAIDF-IRSIDLDYVAKHSLDIMENERSYLINNLEAM---GFRAAGDPSANFITFMIPD--------------AH  283 (332)
T ss_pred             CccCHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC---CCEECCCCCceEEEEEcCC--------------HH
Confidence            3334443322 22221100 1245677778888888888765   2211112457777777641              34


Q ss_pred             HHHHHHHHCCcEEEeeC-------CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          457 YFGAQCEKHGMLVRVSG-------DNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       457 ~~~~~l~~~Gv~~~~~g-------~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      .+.+.|+++||.++++.       +.+||+   ..++++.++++++|++.+
T Consensus       284 ~~~~~l~~~gi~v~~~~~f~~~~~~~iRis---~~~~~~~~~l~~al~~~~  331 (332)
T PRK06425        284 DFYSYLLKNGILVRLLDDYECLGEQYIRIA---IRRRSFNIKLVNALRNFL  331 (332)
T ss_pred             HHHHHHHHCCeEEEECCCCCCCCCCEEEEE---eCCHHHHHHHHHHHHHHh
Confidence            57889999999998741       479999   568899999999998764

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.78  E-value=6.3e-17  Score=167.68  Aligned_cols=306  Identities=14%  Similarity=0.132  Sum_probs=195.3

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee-ecCCCcccc
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA-SLSGLPALH  221 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~-~~s~~~~~~  221 (514)
                      .+...++.+++.++++....+.+++++||+++++.++...+        .++++||+.+.+|++...... ...|..   
T Consensus        41 ~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~--------~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~---  109 (401)
T PLN02409         41 PALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTL--------SPGDKVVSFRIGQFSLLWIDQMQRLNFD---  109 (401)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcC--------CCCCEEEEeCCCchhHHHHHHHHHcCCc---
Confidence            34566778888888754333578999999999999987653        345789999887776532111 111111   


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH-
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV-  300 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l-  300 (514)
                               +..++.+..      . .      .+.+++++.+.....+++.+|++..+.+.+|.+.|    +++|.++ 
T Consensus       110 ---------v~~v~~~~~------~-~------~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~----~~~i~~l~  163 (401)
T PLN02409        110 ---------VDVVESPWG------Q-G------ADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTND----LAGVRKLL  163 (401)
T ss_pred             ---------eEEEECCCC------C-C------CCHHHHHHHHhhCcCCCccEEEEEeecccccccCC----HHHHHHHH
Confidence                     111111100      0 0      01477887776421125677777777777898887    8999999 


Q ss_pred             -HHhcCCEEEEechhcCcccccccceecccCCCCchhch--hhhhcCCcccceeEEeCHHHHHHhhhccCCC---C----
Q 010250          301 -VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSAYMPIGAILVSPEVSEVIHSQSNTL---G----  370 (514)
Q Consensus       301 -~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~---~----  370 (514)
                       |+++|+++|+|++|+ +|..    .++......|++++  .|+|+++ ..+|++++++++++.+.+.....   +    
T Consensus       164 ~~~~~g~~~vvD~v~s-~g~~----~id~~~~~~D~~~~s~~K~l~~P-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~  237 (401)
T PLN02409        164 DCAQHPALLLVDGVSS-IGAL----DFRMDEWGVDVALTGSQKALSLP-TGLGIVCASPKALEASKTAKSPRVFFDWADY  237 (401)
T ss_pred             hhhccCcEEEEEcccc-cCCc----cccccccCccEEEEcCccccCcC-CCcceeEECHHHHHHHhcCCCCCeecCHHHH
Confidence             999999999999997 5422    22222334577654  5999876 46999999999988876421110   0    


Q ss_pred             -cc-ccc-C-CCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeE--EEeeeeeEEEEEccC
Q 010250          371 -SF-SHG-F-TYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGE--IRGTGLILGTEFADN  441 (514)
Q Consensus       371 -~~-~~~-~-t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~--v~g~g~~~~i~~~~~  441 (514)
                       .+ ..+ . .++.+.....+..++++.+.+   +++.++.+++.+++++.|+++ ...+...  -...+.+..+.+++.
T Consensus       238 ~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~~~p~~  316 (401)
T PLN02409        238 LKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAVVVPEG  316 (401)
T ss_pred             HHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceEEEeCCCC
Confidence             00 011 1 234455567777788887765   346788888999999998876 2222221  111223444544321


Q ss_pred             CCCCCCCCCccchHHHHHHHH-HHCCcEEEee-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          442 KSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVS-----GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       442 ~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~-----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      .           ....+...+ .+.|+.+..+     +..+|++....++++|+..++++|++++.++
T Consensus       317 ~-----------~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~  373 (401)
T PLN02409        317 I-----------DSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV  373 (401)
T ss_pred             C-----------CHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence            1           123465555 4679998843     5679999999999999999999999998765

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=99.78  E-value=3.5e-17  Score=165.31  Aligned_cols=270  Identities=16%  Similarity=0.163  Sum_probs=174.2

Q ss_pred             HHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCC
Q 010250          146 SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD  225 (514)
Q Consensus       146 ~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~  225 (514)
                      ..++.+.++++++ ...+++++++|+++++..+.++.         ..+ +|++.+++|++....... .|...      
T Consensus        49 ~~~lr~~la~~~~-~~~~~i~~t~G~~~~i~~~~~~l---------~~g-~vl~~~p~y~~~~~~~~~-~g~~~------  110 (330)
T TIGR01140        49 YDELRAAAAAYYG-LPAASVLPVNGAQEAIYLLPRLL---------APG-RVLVLAPTYSEYARAWRA-AGHEV------  110 (330)
T ss_pred             HHHHHHHHHHHhC-CChhhEEECCCHHHHHHHHHHHh---------CCC-eEEEeCCCcHHHHHHHHH-cCCEE------
Confidence            4788899999874 34578999999999988865443         223 689999999876422211 11110      


Q ss_pred             CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC
Q 010250          226 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD  305 (514)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g  305 (514)
                              ..++                  +.+++++.+.    +..+.+++.| ++.+|.+ ++.+.+++|.++|++||
T Consensus       111 --------~~~~------------------d~~~l~~~~~----~~~~v~i~~p-~NPtG~~-~~~~~~~~l~~~a~~~~  158 (330)
T TIGR01140       111 --------VELP------------------DLDRLPAALE----ELDVLVLCNP-NNPTGRL-IPPETLLALAARLRARG  158 (330)
T ss_pred             --------EEeC------------------CHHHHHhhcc----cCCEEEEeCC-CCCCCCC-CCHHHHHHHHHHhHhcC
Confidence                    0111                  1466666653    2235666777 4555654 46788999999999999


Q ss_pred             CEEEEechhcCcccccccceecccCCCCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcH
Q 010250          306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP  382 (514)
Q Consensus       306 illI~DEv~tG~gr~G~~~~~~~~gv~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~p  382 (514)
                      +++|+||+|.+|......  ....+..++++   +|||.++..++++|++++++++++.+...         ..++..++
T Consensus       159 ~~ii~De~y~~~~~~~~~--~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~---------~~~~~~s~  227 (330)
T TIGR01140       159 GWLVVDEAFIDFTPDASL--APQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPALLARLREA---------LGPWTVNG  227 (330)
T ss_pred             CEEEEECcccccCCccch--hhHhccCCCEEEEEecchhhcCchhhhhheeCCHHHHHHHHhc---------CCCCCchH
Confidence            999999999877432111  11111123333   78999984338999999999999988742         12455677


Q ss_pred             HHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHH
Q 010250          383 VSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ  461 (514)
Q Consensus       383 l~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  461 (514)
                      ++++++.+.++.-. .+...++++++.+.+++.|+++   +.+....+.|.+.++.+.+              ...+.++
T Consensus       228 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~f~~~~~~~--------------~~~l~~~  290 (330)
T TIGR01140       228 PARAAGRAALADTAWQAATRARLAAERARLAALLARL---GGLEVVGGTALFLLVRTPD--------------AAALHEA  290 (330)
T ss_pred             HHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhC---CCceECCCCCeEEEEEcCC--------------HHHHHHH
Confidence            77777776665211 1234566777777777777665   3222233456777776542              2357899


Q ss_pred             HHHCCcEEEeeC-------CEEEEeCCCCCCHHHHHHHHHHH
Q 010250          462 CEKHGMLVRVSG-------DNIMMSPPFIMSPEEVDELISKY  496 (514)
Q Consensus       462 l~~~Gv~~~~~g-------~~iRi~p~~~~t~e~id~~~~~l  496 (514)
                      |+++||.+.++.       +.|||+  +....++ +.++.+|
T Consensus       291 l~~~gi~v~pg~~f~~~~~~~iRi~--~~~~~~~-~~~~~~l  329 (330)
T TIGR01140       291 LARRGILIRDFDNFPGLDPRYLRFA--LPTDEEN-DRLEEAL  329 (330)
T ss_pred             HHHCCEEEEECCCCCCCCCCEEEEE--ecCHHHH-HHHHHhh
Confidence            999999998741       469999  4444455 7777665

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.78  E-value=8e-17  Score=164.84  Aligned_cols=336  Identities=15%  Similarity=0.146  Sum_probs=189.8

Q ss_pred             CCCCCHHHHHHHHHHHhcCCcccc----ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhc
Q 010250          114 LGGSEPRLVAAATAQLNTLPFYHS----FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL  189 (514)
Q Consensus       114 lGh~~p~v~~A~~~~l~~~~~~~~----~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~  189 (514)
                      =|+..|.+++++.+.-......+.    .-....+...++.++++++++   .+++++++||++|+..++....      
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g---~~~i~~~~g~t~al~~~l~~~~------   80 (361)
T cd06452          10 GGRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLG---MDEARVTPGAREGKFAVMHSLC------   80 (361)
T ss_pred             CCCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcC---CceEEEeCCHHHHHHHHHHHhc------
Confidence            356678888888776632211111    011123567889999999873   4789999999999999987653      


Q ss_pred             CCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC-
Q 010250          190 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG-  268 (514)
Q Consensus       190 ~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~-  268 (514)
                        .++++|++.+.+|.+.. ..+...|...            ..++....      +    .+ ..+++++++.+.+.. 
T Consensus        81 --~~gd~Vl~~~~~~~~~~-~~~~~~g~~~------------~~v~~~~~------~----~~-~~d~~~l~~~l~~~~~  134 (361)
T cd06452          81 --EKGDWVVVDGLAHYTSY-VAAERAGLNV------------REVPNTGH------P----EY-HITPEGYAEVIEEVKD  134 (361)
T ss_pred             --CCCCEEEEcCCcchHHH-HHHHhcCCEE------------EEEecCCC------C----Cc-ccCHHHHHHHHHHHhh
Confidence              23456777666655442 1122122111            11111000      0    00 112567777665321 


Q ss_pred             --CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcC
Q 010250          269 --PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSS  344 (514)
Q Consensus       269 --~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~g  344 (514)
                        ..++.+|++...++..|.+.+    +++|.++|++||+++|+||+|. +|..  .+....++.  |++  +++|++++
T Consensus       135 ~~~~~~~lv~l~~p~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~--~~~~~~~~~--d~~~~s~~K~l~~  205 (361)
T cd06452         135 EFGKPPALALLTHVDGNYGNLHD----AKKIAKVCHEYGVPLLLNGAYT-VGRM--PVSGKELGA--DFIVGSGHKSMAA  205 (361)
T ss_pred             ccCCCceEEEEECCCCCCeeecc----HHHHHHHHHHcCCeEEEECCcc-cCCc--CCCHHHcCC--CEEEecCCccccC
Confidence              124666777666777787766    9999999999999999999997 4332  122233343  554  57799987


Q ss_pred             CcccceeEEeCHHHHHHhhhccCCCCc---ccccCCCCCcHHHHHHHHHHHHHHhhc-cHHHHHHHHHHHHHhhhhhccC
Q 010250          345 AYMPIGAILVSPEVSEVIHSQSNTLGS---FSHGFTYSGHPVSCAVAIEALKIYKER-NIVEQVNKIAPKFQDGVKAFSD  420 (514)
Q Consensus       345 G~~pig~v~~~~~i~~~l~~~~~~~~~---~~~~~t~~~~pl~~aaa~aal~~~~~~-~~~~~~~~~~~~l~~~L~~l~~  420 (514)
                      + .++|++++++++++.+.........   ...++|.  .+..+.++.++++.+.+. +...+..++.+++++.|+++..
T Consensus       206 ~-~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~l~g  282 (361)
T cd06452         206 S-APIGVLATTEEWADIVFRTSQMFKIKEVELLGCTL--RGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAELEKIEG  282 (361)
T ss_pred             C-CCeEEEEECHHHHHHHhccccccccceeeeecccc--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            6 5899999999998888643211100   0111221  122344445555543321 1223333445788888876622


Q ss_pred             CCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--CEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250          421 SPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       421 ~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--~~iRi~p~~~~t~e~id~~~~~l~~  498 (514)
                      ..+.........++.++...  .... .......+..+.+.|+++||.....+  +.+|++.+ .+|+||++.++++|++
T Consensus       283 ~~v~~~~~~~~n~~~~~~~~--~~~~-~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~ri~~~-g~~~e~~~~l~~al~~  358 (361)
T cd06452         283 IKQLGEKPKNHDLMFFETPS--FDEI-AKKHKRRGYFLYSELKKRGIHGIKPGLTRYFKLSTY-GLTWEQVEYVVDAFKE  358 (361)
T ss_pred             eEEECCCCCCCceEEEEcCC--cchh-hhhccccchhHHHHHHHcCceEEcCCCceEEEEEec-CCCHHHHHHHHHHHHH
Confidence            21111111223344444320  0000 00000012347789999999965433  45888853 3799999999999986


Q ss_pred             HH
Q 010250          499 AL  500 (514)
Q Consensus       499 ~l  500 (514)
                      ++
T Consensus       359 ~~  360 (361)
T cd06452         359 IA  360 (361)
T ss_pred             Hh
Confidence            54

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.78  E-value=2.8e-17  Score=168.88  Aligned_cols=328  Identities=18%  Similarity=0.226  Sum_probs=210.8

Q ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-----ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250          102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-----HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND  176 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-----~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~  176 (514)
                      |||-.+      .|..++.|.+++.+.+......     +.+.....+...+..+.++++++....+.++|++++++|++
T Consensus         2 Yld~~~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~   75 (371)
T PF00266_consen    2 YLDNAG------TGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDEEVVFTSNGTEALN   75 (371)
T ss_dssp             EEBTSS------S-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHH
T ss_pred             EeeCCC------ccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccccccccccccchhhh
Confidence            677533      3557899999999987653111     11111123445677888888885432278999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee---cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS---LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS  253 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~---~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (514)
                      .++.....-.     .++++|++.+..|++.......   ..|...            ..++.+..      +       
T Consensus        76 ~~~~~l~~~~-----~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v------------~~i~~~~~------~-------  125 (371)
T PF00266_consen   76 AVASSLLNPL-----KPGDEVLVTSNEHPSNRYPWEEIAKRKGAEV------------RVIPADPG------G-------  125 (371)
T ss_dssp             HHHHHHHHHG-----TTTCEEEEEESSHHHHHHHHHHHHHHTTEEE------------EEEEEGTT------S-------
T ss_pred             hhhhcccccc-----ccccccccccccccccccccccccccchhhh------------cccccccc------c-------
Confidence            9998773211     4457899999888876511111   111111            01111000      0       


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCC
Q 010250          254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP  333 (514)
Q Consensus       254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~p  333 (514)
                      ..+.+++++.+.    +++.+|++..+.+..|.+.|    +++|.++|+++|+++++|-+|+ +|..    .++.....+
T Consensus       126 ~~~~~~~~~~l~----~~~~lv~~~~~~~~tG~~~p----i~~I~~~~~~~~~~~~vD~~~~-~g~~----~id~~~~~~  192 (371)
T PF00266_consen  126 SLDLEDLEEALN----PDTRLVSISHVENSTGVRNP----IEEIAKLAHEYGALLVVDAAQS-AGCV----PIDLDELGA  192 (371)
T ss_dssp             SCSHHHHHHHHH----TTESEEEEESBETTTTBBSS----HHHHHHHHHHTTSEEEEE-TTT-TTTS----S--TTTTTE
T ss_pred             hhhhhhhhhhhc----cccceEEeecccccccEEee----eceehhhhhccCCceeEechhc-cccc----ccccccccc
Confidence            001477777775    57889999999999999988    9999999999999999999997 6544    233334457


Q ss_pred             chhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcc-----c------ccCCC---CCcHHHHHHHHHHHHHHhh
Q 010250          334 DLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF-----S------HGFTY---SGHPVSCAVAIEALKIYKE  397 (514)
Q Consensus       334 Div~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~-----~------~~~t~---~~~pl~~aaa~aal~~~~~  397 (514)
                      |++++|  | |.|+ ..+|+++++++.++.+.+........     .      ....|   ..+.....+..++++.+.+
T Consensus       193 D~~~~s~~K-l~gp-~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~  270 (371)
T PF00266_consen  193 DFLVFSSHK-LGGP-PGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEE  270 (371)
T ss_dssp             SEEEEESTS-TTSS-STEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHH
T ss_pred             ceeeecccc-cCCC-CchhhheehhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhc
Confidence            888776  9 8886 57899999999998886422111100     0      00001   2344555666677877754


Q ss_pred             ---ccHHHHHHHHHHHHHhhhhhccCCCcee--EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee
Q 010250          398 ---RNIVEQVNKIAPKFQDGVKAFSDSPIIG--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS  472 (514)
Q Consensus       398 ---~~~~~~~~~~~~~l~~~L~~l~~~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~  472 (514)
                         +++.++..++.+++++.|+++....+..  .-...+.++.+.+....            ...+.+.|.++||.++.+
T Consensus       271 ~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------~~~~~~~L~~~~I~~~~G  338 (371)
T PF00266_consen  271 IGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGSD------------ADDVVKYLEERGIAVSTG  338 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTSS------------HHHHHHHHHHHTEEEEES
T ss_pred             cccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCCC------------HHHHHHHHhhcCEEEecc
Confidence               4567888889999999998863211111  12334667777774322            456788899999999872


Q ss_pred             -------------CCEEEEeCCCCCCHHHHHHH
Q 010250          473 -------------GDNIMMSPPFIMSPEEVDEL  492 (514)
Q Consensus       473 -------------g~~iRi~p~~~~t~e~id~~  492 (514)
                                   +..||+++....|++|||++
T Consensus       339 ~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l  371 (371)
T PF00266_consen  339 SACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL  371 (371)
T ss_dssp             TTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred             CcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence                         16899999999999999975

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>PRK06855 aminotransferase; Validated

Probab=99.78  E-value=1.5e-16  Score=166.48  Aligned_cols=352  Identities=14%  Similarity=0.112  Sum_probs=197.5

Q ss_pred             CCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHH
Q 010250           99 GKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEAN  175 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~  175 (514)
                      |+..+++..|.. ...+. .++.+.+++.+.+.... +.+....+..+....+++.+.+..+ ..+.++|++++++.+|+
T Consensus        31 g~~~~~~~~G~p-~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al  109 (433)
T PRK06855         31 GVKITWENIGDP-IAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAI  109 (433)
T ss_pred             cccccccccCCC-cccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHH
Confidence            556666654421 11244 46677788887765421 1111112233344445555544322 23567899999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYS  253 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  253 (514)
                      ..++.++         ..++.|++.+++|++.........+....            .++..  +.|.            
T Consensus       110 ~~~~~l~---------~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v------------~v~~~~~~~~~------------  156 (433)
T PRK06855        110 AKIYGLL---------RREARVIGPSPAYSTHSSAEAAHAGYPPV------------TYRLDPENNWY------------  156 (433)
T ss_pred             HHHHHhc---------CCCCeEEEeCCCCchHHHHHHHhcCCeEE------------EEecccccCCC------------
Confidence            8887532         23578999999999864221111111100            00100  0010            


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCC
Q 010250          254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP  333 (514)
Q Consensus       254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~p  333 (514)
                       .++++|++++... ++..+++++.|. +.+|. ..+++.+++|.++|++||+++|.||+|..+-..+..+. ....+.+
T Consensus       157 -~d~~~l~~~~~~~-~~~~~i~l~~P~-NPTG~-~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~-sl~~~~~  231 (433)
T PRK06855        157 -PDLDDLENKVKYN-PSIAGILLINPD-NPTGA-VYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTV-PLSEVIG  231 (433)
T ss_pred             -CCHHHHHHHHhcC-CCceEEEEECCC-CCCCc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCC-CHHHHcC
Confidence             1247788777421 233556777775 45554 44678999999999999999999999998844443211 1111112


Q ss_pred             c---h--hchhhhhcCCcccceeEEeC-----H---HHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH--hh-
Q 010250          334 D---L--VSFAKALSSAYMPIGAILVS-----P---EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY--KE-  397 (514)
Q Consensus       334 D---i--v~~sK~l~gG~~pig~v~~~-----~---~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~--~~-  397 (514)
                      |   +  -+|||.++..++++|++++.     +   .+++.+..        ......+.+.+++.++.++++.-  ++ 
T Consensus       232 ~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~Q~a~~~~l~~~~~~~~  303 (433)
T PRK06855        232 DVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILN--------AKMIEVCSTTLPQMAIPRIMSHPEYKNY  303 (433)
T ss_pred             cCCeEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHH--------hhccccCCChHHHHHHHHhhcCCcHHHH
Confidence            2   2  36899886333999999972     2   23333321        01123345667777777766421  10 


Q ss_pred             -ccHHHHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCC-C--CCCCCC--cc-----------chHHHHH
Q 010250          398 -RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKS-P--NEPFPP--EW-----------GIGAYFG  459 (514)
Q Consensus       398 -~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~-~--~~~~~~--~~-----------~~~~~~~  459 (514)
                       ++..+.++++.+.+.+.|+++   +.....+.. |.++++.+++... .  ...+..  ..           .....++
T Consensus       304 ~~~~~~~~~~r~~~~~~~L~~~---~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  380 (433)
T PRK06855        304 LKERNKRYEKRSNIAYEKLKDV---PGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFV  380 (433)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcC---CCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHH
Confidence             123455666666677766554   222222333 4677787764210 0  000000  00           0022344


Q ss_pred             -HHHHHCCcEEEeeC------CEEEEeCCCC-CCHHHHHHHHHHHHHHHHH
Q 010250          460 -AQCEKHGMLVRVSG------DNIMMSPPFI-MSPEEVDELISKYGKALKA  502 (514)
Q Consensus       460 -~~l~~~Gv~~~~~g------~~iRi~p~~~-~t~e~id~~~~~l~~~l~~  502 (514)
                       ..+.+.||.+.|+.      +.+||+  +. .++++|++++++|.+++++
T Consensus       381 ~~l~~~~gV~v~PG~~F~~~~~~~Rls--~~~~~~~~i~~~~~~l~~~~~~  429 (433)
T PRK06855        381 YYLLASTGICVVPLSSFCTELNGFRVT--LLERDEEKFEWIYQTLAEKIEE  429 (433)
T ss_pred             HHHHHHcCEEEecCCcCCCCCCceEEE--ECCCcHHHHHHHHHHHHHHHHH
Confidence             45678899998752      359999  45 5899999999999999865

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=99.78  E-value=1.9e-16  Score=164.39  Aligned_cols=346  Identities=14%  Similarity=0.102  Sum_probs=202.5

Q ss_pred             CCCEEEEccCCcccc-cCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-----CCCCeEEEeCCh
Q 010250           98 NGKKYLDSLAGLWCT-ALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-----SKMAKVFFTNSG  171 (514)
Q Consensus        98 dG~~ylD~~s~~~~~-~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-----~~~~~v~~~~sG  171 (514)
                      .|..++|+..|.... +.=..++.+.+++.+.+......  .+ .+.....++.+.+++++..     ...+++++++||
T Consensus        29 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~--~Y-~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~  105 (403)
T TIGR01265        29 PEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFN--GY-APSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGC  105 (403)
T ss_pred             cCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCC--CC-CCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCh
Confidence            477899998775421 11124688999998887642211  01 1223334566666666532     145789999999


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhH
Q 010250          172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE  251 (514)
Q Consensus       172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (514)
                      ++|+..+++...        ..+++|++.+++|.+........ |...            ..++.+..          +.
T Consensus       106 t~al~~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~-g~~~------------~~~~~~~~----------~~  154 (403)
T TIGR01265       106 SQAIEICIEALA--------NPGANILVPRPGFPLYDTRAAFS-GLEV------------RLYDLLPE----------KD  154 (403)
T ss_pred             HHHHHHHHHHhC--------CCCCEEEEeCCCchhHHHHHHHc-CCEE------------EEecCCcc----------cC
Confidence            999999998763        23467999999886543222111 1100            00111000          00


Q ss_pred             HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccC
Q 010250          252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYS  330 (514)
Q Consensus       252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~g  330 (514)
                      + ..+.+++++++.   ++....+++.| ++..|.+ .+.+.+++|.++|+++|+++|+||+|..|...+..+ ....+.
T Consensus       155 ~-~~d~~~l~~~~~---~~~~~v~i~~p-~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~  228 (403)
T TIGR01265       155 W-EIDLDGLEALAD---EKTVAIVVINP-SNPCGSV-FSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFA  228 (403)
T ss_pred             C-ccCHHHHHHHhC---cCccEEEEecC-CCCCCCC-CCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhc
Confidence            0 011466666553   23344555555 5556654 455778999999999999999999999885444321 111111


Q ss_pred             CCCchh---chhhhhcCCcccceeEEeC-H-H-----HHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---
Q 010250          331 IKPDLV---SFAKALSSAYMPIGAILVS-P-E-----VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---  397 (514)
Q Consensus       331 v~pDiv---~~sK~l~gG~~pig~v~~~-~-~-----i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---  397 (514)
                      -.+.++   +|||.++..++++|++++. + +     +.+.+..        ....+++.+.+++.++.++|+...+   
T Consensus       229 ~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~q~~~~~~l~~~~~~~~  300 (403)
T TIGR01265       229 SIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKN--------LLQRILGPATIVQGALPDILENTPQEFF  300 (403)
T ss_pred             cCCcEEEEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHH--------HhhhhcCCChHHHHHHHHHHHhChHHHH
Confidence            112233   6899865544999999884 2 2     3333331        1112345677777777777753111   


Q ss_pred             ccHHHHHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEee---
Q 010250          398 RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVS---  472 (514)
Q Consensus       398 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~---  472 (514)
                      ++..++++++.+.+.+.|+.+   +.+..+ ..-|.+++++++......     .. ....+...+ .++||.+.++   
T Consensus       301 ~~~~~~~~~~~~~l~~~L~~~---~~~~~~~p~~g~f~~~~~~~~~~~~-----~~-~~~~~~~~l~~~~gv~v~pg~~f  371 (403)
T TIGR01265       301 DGKISVLKSNAELCYEELKDI---PGLVCPKPEGAMYLMVKLELELFPE-----IK-DDVDFCEKLVREESVICLPGSAF  371 (403)
T ss_pred             HHHHHHHHHHHHHHHHHHhcC---CCceecCCCceeEEEEeccccccCC-----CC-CHHHHHHHHHHhCCEEEeCcccc
Confidence            234555666666777777654   222212 334677888876431100     00 133465664 5789999875   


Q ss_pred             --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          473 --GDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       473 --g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                        .+.||++  +..+++++++++++|.+.+++
T Consensus       372 ~~~~~iRis--~~~~~~~l~~~l~~l~~~~~~  401 (403)
T TIGR01265       372 GLPNWVRIT--ITVPESMLEEACSRIKEFCER  401 (403)
T ss_pred             CCCCeEEEE--ecCCHHHHHHHHHHHHHHHHh
Confidence              2579999  667789999999999888754

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>PRK08354 putative aminotransferase; Provisional

Probab=99.77  E-value=2.4e-16  Score=157.83  Aligned_cols=295  Identities=18%  Similarity=0.200  Sum_probs=180.9

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT  177 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~  177 (514)
                      +...+|||..|.  ++++  +|.+.+++.+.+.....|      +  ....+.+.+++.++    +++++++|++||+..
T Consensus         6 ~~~~~i~l~~~~--np~~--p~~~~~a~~~~~~~~~~y------p--~~~~l~~~ia~~~~----~~I~vt~G~~~al~~   69 (311)
T PRK08354          6 REEGLIDFSASV--NPYP--PEWLDEMFERAKEISGRY------T--YYEWLEEEFSKLFG----EPIVITAGITEALYL   69 (311)
T ss_pred             CccceeEecCCC--CCCC--CHHHHHHHHHHHHHhhcC------C--ChHHHHHHHHHHHC----CCEEECCCHHHHHHH
Confidence            345689998763  5554  688999998776543211      1  23567888888863    479999999999987


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      ++.++         .+++.|++.+++|.+........+.... .              .+.                 +.
T Consensus        70 ~~~~~---------~~gd~vlv~~P~y~~~~~~~~~~g~~~~-~--------------~~~-----------------d~  108 (311)
T PRK08354         70 IGILA---------LRDRKVIIPRHTYGEYERVARFFAARII-K--------------GPN-----------------DP  108 (311)
T ss_pred             HHHhh---------CCCCeEEEeCCCcHHHHHHHHHcCCEEe-e--------------cCC-----------------CH
Confidence            76433         2356899999999887543333222110 0              000                 13


Q ss_pred             HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh-
Q 010250          258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV-  336 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv-  336 (514)
                      +.+++.+.    +....+++.|. +.+|.+ .+.+.+++|.++|++||+++|+||++.+|...+..  ..    .+.++ 
T Consensus       109 ~~l~~~~~----~~~~vi~~~P~-NPTG~~-~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~--~~----~~~vi~  176 (311)
T PRK08354        109 EKLEELVE----RNSVVFFCNPN-NPDGKF-YNFKELKPLLDAVEDRNALLILDEAFIDFVKKPES--PE----GENIIK  176 (311)
T ss_pred             HHHHHhhc----CCCEEEEecCC-CCCCCc-cCHHHHHHHHHHhhhcCcEEEEeCcchhccccccc--cC----CCcEEE
Confidence            56666553    23357778885 556654 46688999999999999999999999988433211  11    12222 


Q ss_pred             --chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Q 010250          337 --SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQD  413 (514)
Q Consensus       337 --~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~  413 (514)
                        +|||.++ .| +++|++++   +.+.+...       .  ..+..+.++.+++.+.++    +. .++++++.+.+++
T Consensus       177 ~~S~SK~~~l~G-lRiG~~v~---~~~~l~~~-------~--~~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~  238 (311)
T PRK08354        177 LRTFTKSYGLPG-IRVGYVKG---FEEAFRSV-------R--MPWSIGSTGYAFLEFLIE----DD-FEHLRKTMPLIWR  238 (311)
T ss_pred             EeccHhhcCCcc-ceeeeeee---hHHHHHHc-------C--CCccCCHHHHHHHHHHHH----hH-HHHHHHHHHHHHH
Confidence              6899887 45 89999998   44555421       1  233444555444444333    11 2334444444444


Q ss_pred             hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-----CEEEEeCCCCCCHHH
Q 010250          414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMSPEE  488 (514)
Q Consensus       414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-----~~iRi~p~~~~t~e~  488 (514)
                      ..+.+....   ...+.|.++.+++.+              ...+.+.|.++||.+.++.     +.|||+   ..++++
T Consensus       239 ~~~~l~~~l---~~~~~~~~~~~~~~~--------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~---~~~~~~  298 (311)
T PRK08354        239 EKERFEKAL---YVKSDANFFIKDVGD--------------AEKFVEFLKRNGILVRDCTSFGLPGYIRFS---VRDREE  298 (311)
T ss_pred             HHHHHHHhc---CCCCCCcEEEEECCC--------------HHHHHHHHHHCCeEEEecccCCCCCeEEEE---eCCHHH
Confidence            444331111   112445555554321              2457788999999999763     579999   456667


Q ss_pred             HHHHHHHHHHH
Q 010250          489 VDELISKYGKA  499 (514)
Q Consensus       489 id~~~~~l~~~  499 (514)
                      .+++++.|++.
T Consensus       299 ~~~l~~al~~~  309 (311)
T PRK08354        299 NEKLIRALREW  309 (311)
T ss_pred             HHHHHHHHHHh
Confidence            77777777653

>PRK06836 aspartate aminotransferase; Provisional

Probab=99.77  E-value=4.7e-16  Score=160.97  Aligned_cols=337  Identities=14%  Similarity=0.110  Sum_probs=195.7

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-----cCCCCeEEEeCChhHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-----ASKMAKVFFTNSGSEA  174 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-----~~~~~~v~~~~sGseA  174 (514)
                      ...+||..|...  + ..++.+.+++.+.++........+ .+.....++.+.+++++.     ..+.++++++++++++
T Consensus        33 ~~~~~l~~g~p~--~-~~~~~v~~a~~~~~~~~~~~~~~y-~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~a  108 (394)
T PRK06836         33 DNVFDFSLGNPS--V-PPPAAVKEALRELAEEEDPGLHGY-MPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGA  108 (394)
T ss_pred             CCeEEecCcCCC--C-CCCHHHHHHHHHHHhcCCcCcccC-CCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHH
Confidence            457888776321  2 246788888877765321100001 112223344444444432     2346789999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      +..+++...        ..++.|++.+++|.++...... .|...            ..++..+.           .+ .
T Consensus       109 l~~~~~~l~--------~~gd~Vli~~p~~~~~~~~~~~-~g~~v------------~~v~~~~~-----------~~-~  155 (394)
T PRK06836        109 LNVALKAIL--------NPGDEVIVFAPYFVEYRFYVDN-HGGKL------------VVVPTDTD-----------TF-Q  155 (394)
T ss_pred             HHHHHHHhc--------CCCCEEEEcCCCCccHHHHHHH-cCCEE------------EEEecCCc-----------cC-c
Confidence            998887653        2346799999988876432211 11111            11111100           00 0


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh------cCCEEEEechhcCcccccccceecc
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK------YDILFIADEVICAFGRLGTMFGCDK  328 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~------~gillI~DEv~tG~gr~G~~~~~~~  328 (514)
                      .+++++++++.    +++.+|++...++.+|.+. +.+.+++|.++|++      ||+++|+||++..|-..|.... ..
T Consensus       156 ~d~~~l~~~~~----~~~~~v~~~~p~NPtG~~~-~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~-~~  229 (394)
T PRK06836        156 PDLDALEAAIT----PKTKAVIINSPNNPTGVVY-SEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVP-YI  229 (394)
T ss_pred             CCHHHHHhhcC----cCceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCC-Ch
Confidence            12467777664    2455566555567777655 45788999999999      8999999999987743332111 00


Q ss_pred             cCCCCchh---chhhhhcCCcccceeEEeCHHHHHH---hhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHH
Q 010250          329 YSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEV---IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVE  402 (514)
Q Consensus       329 ~gv~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~---l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~  402 (514)
                      ....++++   +|||.++..++++|++++++++.+.   +....   ........+..+++.+.++...++   +....+
T Consensus       230 ~~~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~  303 (394)
T PRK06836        230 FKYYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDLVAALV---FANRILGFVNAPALMQRVVAKCLD---ATVDVS  303 (394)
T ss_pred             HHccCcEEEEecchhhccCcceeeEEEecCHHHhhhHHHHHHHH---HHhhccccccCCHHHHHHHHHHhC---ChHHHH
Confidence            11112333   5899998433899999998876432   11100   000001123455666665554443   222345


Q ss_pred             HHHHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEE
Q 010250          403 QVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNI  476 (514)
Q Consensus       403 ~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~i  476 (514)
                      .++++.+.+.+.|++.   .+ ..... -|.++++.++...            ...+++.|.++||.+.++     ++++
T Consensus       304 ~~~~~r~~l~~~L~~~---g~-~~~~~~gg~~~~~~~~~~~------------~~~~~~~l~~~gv~v~~g~~f~~~~~i  367 (394)
T PRK06836        304 IYKRNRDLLYDGLTEL---GF-ECVKPQGAFYLFPKSPEED------------DVAFCEKAKKHNLLLVPGSGFGCPGYF  367 (394)
T ss_pred             HHHHHHHHHHHHHHhC---CC-EeecCCceEEEEEeCCCCC------------HHHHHHHHHhCCEEEECchhcCCCCeE
Confidence            5666777777777664   22 11222 2556666554211            344668889999999876     3579


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          477 MMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       477 Ri~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ||+.  ..+++++++++++|++++++.
T Consensus       368 Ri~~--~~~~~~~~~~i~~l~~~l~~~  392 (394)
T PRK06836        368 RLSY--CVDTETIERSLPAFEKLAKEY  392 (394)
T ss_pred             EEEe--cCCHHHHHHHHHHHHHHHHHh
Confidence            9994  579999999999999988653

>PLN02231 alanine transaminase

Probab=99.77  E-value=2e-16  Score=168.47  Aligned_cols=345  Identities=14%  Similarity=0.136  Sum_probs=198.9

Q ss_pred             CHHHHHHHHHHHhcCC----ccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCC
Q 010250          118 EPRLVAAATAQLNTLP----FYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRP  192 (514)
Q Consensus       118 ~p~v~~A~~~~l~~~~----~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~  192 (514)
                      +.++++++.+.+....    ..++...+..+....+++.+.+..+ ....++|++++|+++|+..++++..       .+
T Consensus       142 p~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~-------~~  214 (534)
T PLN02231        142 SADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLI-------RS  214 (534)
T ss_pred             CHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhc-------cC
Confidence            4466666666665421    1111112233334444444443321 2356899999999999999998763       12


Q ss_pred             CccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC--C
Q 010250          193 NKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP--E  270 (514)
Q Consensus       193 ~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~--~  270 (514)
                      .++.|++..++|.+........++.....       +    .+....|.             .++++|++.+.....  .
T Consensus       215 ~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~-------~----l~~~~~~~-------------~d~~~Le~~l~~~~~~~~  270 (534)
T PLN02231        215 EKDGILCPIPQYPLYSASIALHGGTLVPY-------Y----LDEATGWG-------------LEISELKKQLEDARSKGI  270 (534)
T ss_pred             CCCEEEEeCCCChhHHHHHHHcCCEEEEE-------e----cCcccCCC-------------CCHHHHHHHHHHHhhcCC
Confidence            35789999999988754333322221100       0    00000111             125777777754211  1


Q ss_pred             cE-EEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc-cccc-eecc----cCC---CCchh---c
Q 010250          271 TI-AAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL-GTMF-GCDK----YSI---KPDLV---S  337 (514)
Q Consensus       271 ~~-aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~-G~~~-~~~~----~gv---~pDiv---~  337 (514)
                      ++ +.+++.| +|.+|. +.+++.+++|.++|++||+++|.||+|..+-.. +..+ .+..    .|.   ...++   +
T Consensus       271 ~~k~ivl~nP-~NPTG~-vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S  348 (534)
T PLN02231        271 TVRALVVINP-GNPTGQ-VLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQS  348 (534)
T ss_pred             CeEEEEEeCC-CCCCCc-CCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEec
Confidence            34 4566666 455564 446789999999999999999999999977442 3222 1110    111   11244   6


Q ss_pred             hhhhhcC-CcccceeEEe---CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHH-------HH----hh-ccHH
Q 010250          338 FAKALSS-AYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK-------IY----KE-RNIV  401 (514)
Q Consensus       338 ~sK~l~g-G~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~-------~~----~~-~~~~  401 (514)
                      |||++.| .++++|++++   ++++++.+...        ...+.+.+..+++++..+++       .+    ++ +++.
T Consensus       349 ~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~--------~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~  420 (534)
T PLN02231        349 VSKGYYGECGKRGGYMEVTGFTSDVREQIYKV--------ASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGIL  420 (534)
T ss_pred             cCcccccCCccceEEEEEecCCHHHHHHHHHH--------HhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHH
Confidence            8998743 2299999976   68888887631        11233445556666655552       11    11 2356


Q ss_pred             HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEE-EEccCCCCCCCCC-CccchHHHHHHHHH-HCCcEEEeeC-----
Q 010250          402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGT-EFADNKSPNEPFP-PEWGIGAYFGAQCE-KHGMLVRVSG-----  473 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i-~~~~~~~~~~~~~-~~~~~~~~~~~~l~-~~Gv~~~~~g-----  473 (514)
                      +.++++.+.+.+.|+++   +.+......|.|+.+ .+.-......... ........++..++ +.||.+.|+.     
T Consensus       421 ~~~~~r~~~l~~~L~~~---~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~  497 (534)
T PLN02231        421 SSLARRAKTLEDALNSL---EGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQV  497 (534)
T ss_pred             HHHHHHHHHHHHHHhcC---CCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCC
Confidence            77888888888888765   333334455555444 3321100000000 00001233555555 6799998752     


Q ss_pred             --C-EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 010250          474 --D-NIMMSPPFIMSPEEVDELISKYGKALKATEERVK  508 (514)
Q Consensus       474 --~-~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~~  508 (514)
                        . .+|++  +..++++|++++++|.+++++..++++
T Consensus       498 ~g~~~~Rit--~~~~~e~l~eal~RL~~~~~~~~~~~~  533 (534)
T PLN02231        498 PGTWHFRCT--ILPQEDKIPAIVSRLTEFHKSFMDEFR  533 (534)
T ss_pred             CCCCeEEEE--eCCCHHHHHHHHHHHHHHHHHHHHHhc
Confidence              2 49999  678999999999999999988877654

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=99.77  E-value=7e-16  Score=161.49  Aligned_cols=338  Identities=14%  Similarity=0.132  Sum_probs=191.6

Q ss_pred             HHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEE
Q 010250          120 RLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA  199 (514)
Q Consensus       120 ~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~  199 (514)
                      .+.+++.+++......+    .......+|.+.+++++   +.+.+++++||++|+..++....       .++ + ||.
T Consensus        58 a~~~a~~~a~~~g~~~Y----~~~~g~~~Lreaia~~~---~~~~vv~t~ggt~A~~~~~~all-------~pG-D-Vii  121 (460)
T PRK13238         58 AMSDRQWAAMMRGDEAY----AGSRSYYRLEDAVKDIF---GYPYTIPTHQGRAAEQILFPVLI-------KKG-D-VVP  121 (460)
T ss_pred             hhhHHHHHHHHhCCccc----CCCCCHHHHHHHHHHHh---CCCcEEECCCHHHHHHHHHHHhC-------CCC-C-EEc
Confidence            57788877775533221    13445678999999998   34679999999999999987652       233 3 777


Q ss_pred             EecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc
Q 010250          200 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP  279 (514)
Q Consensus       200 ~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEp  279 (514)
                      .++.|..+.......++.+.... ..   +.. .....+.|++           ..++++|++.+...+++++++|+++.
T Consensus       122 ~~p~~~~~~~~i~~~G~~~v~v~-~~---~~~-~~~~~~~f~g-----------~id~e~Le~~i~~~~~~~tk~Ivl~~  185 (460)
T PRK13238        122 SNYHFDTTRAHIELNGATAVDLV-ID---EAL-DTGSRHPFKG-----------NFDLEKLEALIEEVGAENVPFIVMTI  185 (460)
T ss_pred             cCCcccchHHHHHHcCCEEEEEe-cc---ccc-cccccccccC-----------CcCHHHHHHHHhhcCCCceeEEEEec
Confidence            77766544322222222221100 00   000 0000001111           12368899988765545688888887


Q ss_pred             ccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC----cccc---cccc-eec-c---cCCCCchhchh-hhhcCCc
Q 010250          280 VIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA----FGRL---GTMF-GCD-K---YSIKPDLVSFA-KALSSAY  346 (514)
Q Consensus       280 v~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG----~gr~---G~~~-~~~-~---~gv~pDiv~~s-K~l~gG~  346 (514)
                      .+|.+|..+.+.+.|++|+++|++||++||.|+++..    |+..   |... ... .   .+--.|.+++| |..  |+
T Consensus       186 p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~--g~  263 (460)
T PRK13238        186 TNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKD--AM  263 (460)
T ss_pred             CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccC--CC
Confidence            7776654556688899999999999999999997741    1100   1000 000 0   00114555554 111  22


Q ss_pred             ccceeEEe-C-HHHHHHhhhccCCCCcccccC-CCCCcHHHHHHHHH-HHHHHhhccHHHHHHHHHHHHHhhhhhccCCC
Q 010250          347 MPIGAILV-S-PEVSEVIHSQSNTLGSFSHGF-TYSGHPVSCAVAIE-ALKIYKERNIVEQVNKIAPKFQDGVKAFSDSP  422 (514)
Q Consensus       347 ~pig~v~~-~-~~i~~~l~~~~~~~~~~~~~~-t~~~~pl~~aaa~a-al~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~  422 (514)
                      .|.|++++ + +++++.++..    ....++. ||++.+..+.+|++ +|+...+++..+...++.++|.+.|++. +.+
T Consensus       264 ~~~GG~i~~~d~~l~~~~~~~----~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~~~~~~~l~~~L~~~-G~~  338 (460)
T PRK13238        264 VNIGGLLCFRDEDLFTECRTL----CILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYRIGQVEYLGEGLEEA-GVP  338 (460)
T ss_pred             CcceeEEEcChHHHHHHhhhc----ccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHHHHHHHHHHHHHHHC-CCC
Confidence            34455554 5 5777777531    1122444 88887666454544 5554434455555555678899999875 556


Q ss_pred             ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHH-HHHCCcEEEeeC------------------CEEEEeCCC-
Q 010250          423 IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVSG------------------DNIMMSPPF-  482 (514)
Q Consensus       423 ~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~g------------------~~iRi~p~~-  482 (514)
                      ++...  -|.++.+++..-.. .  .+...-....++.. +.+.||.+.+.+                  +.+||+.|- 
T Consensus       339 ~~~p~--Gg~~v~~d~~~~~~-~--~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr  413 (460)
T PRK13238        339 IQTPA--GGHAVFVDAGKFLP-H--IPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRR  413 (460)
T ss_pred             eEccC--CceEEEEEchhcCC-C--CCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccc
Confidence            55432  23444455432110 0  00000012334544 457788886532                  459999774 


Q ss_pred             CCCHHHHHHHHHHHHHHHH
Q 010250          483 IMSPEEVDELISKYGKALK  501 (514)
Q Consensus       483 ~~t~e~id~~~~~l~~~l~  501 (514)
                      .-|.++++.+.++|.+..+
T Consensus       414 ~~~~~~~~~~~~~l~~~~~  432 (460)
T PRK13238        414 VYTQSHMDYVAEALKAVKE  432 (460)
T ss_pred             cCCHHHHHHHHHHHHHHHH
Confidence            4499999999999988663

>PLN02672 methionine S-methyltransferase

Probab=99.77  E-value=3.4e-16  Score=174.40  Aligned_cols=353  Identities=11%  Similarity=0.070  Sum_probs=212.4

Q ss_pred             EEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC-C-CCeEEEeCC
Q 010250           93 YVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS-K-MAKVFFTNS  170 (514)
Q Consensus        93 ~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~-~-~~~v~~~~s  170 (514)
                      ++.+.+|..+|++..|-  +.++ .+|.|.+++.+.+.....+    .+..+....+++++.+.++-. + .++++++++
T Consensus       690 ~~~~~~g~~vI~LsinE--~d~p-pPp~V~eAi~eal~~~~~s----~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~G  762 (1082)
T PLN02672        690 SVSGSQESSLIHMDVDE--SFLP-VPSAVKASIFESFVRQNIS----ESETDPRPSILQFIKSNYGFPTDSCTEFVYGDT  762 (1082)
T ss_pred             CCcccCCCCEEEEeCCC--CCCC-CCHHHHHHHHHHHhhcCCC----CCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCC
Confidence            45666788899987763  4455 6889999999887653221    123455678888888875321 1 247999998


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCC
Q 010250          171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGET  248 (514)
Q Consensus       171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  248 (514)
                      ..+++..++....        ..++.|++..++|......+...+....             .++..  +.|+       
T Consensus       763 s~elL~lll~aLl--------~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv-------------~Vpl~~e~gf~-------  814 (1082)
T PLN02672        763 SLALFNKLVLCCV--------QEGGTLCFPAGSNGTYVSAAKFLKANFR-------------RIPTKSSDGFK-------  814 (1082)
T ss_pred             HHHHHHHHHHHHc--------CCCCEEEEeCCChHHHHHHHHHcCCEEE-------------EEecccccCCC-------
Confidence            8888888877653        3457899999999887544333222111             11110  0111       


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc---e
Q 010250          249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF---G  325 (514)
Q Consensus       249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~---~  325 (514)
                            .+.+++++++...  ....++++.|.+|++|.+ .+++.+++|.++|++||+++|+||+|.++-..+...   .
T Consensus       815 ------lD~d~Le~al~~~--~~~~I~L~nPnhNPTG~v-~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~s  885 (1082)
T PLN02672        815 ------LTAKTLASTLETV--KKPWVYISGPTINPTGLL-YSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWD  885 (1082)
T ss_pred             ------CCHHHHHHHhccC--CCCEEEEECcCCCCcCcc-CCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccc
Confidence                  1146677766421  234678888875666754 477999999999999999999999999775544321   1


Q ss_pred             ec----cc-CCCC--chh---chhhhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH
Q 010250          326 CD----KY-SIKP--DLV---SFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI  394 (514)
Q Consensus       326 ~~----~~-gv~p--Div---~~sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~  394 (514)
                      ..    .+ ...+  .++   +|||.++.+++++|+++++ +++++.+....      .....+..+.+++++++++++.
T Consensus       886 l~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~------~~s~~~~~~q~Aaaaalall~~  959 (1082)
T PLN02672        886 LKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSAP------GLSRPHSTLKYTIKKLLGLKNQ  959 (1082)
T ss_pred             hhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHhh------hhcCCCcHHHHHHHHHHHHHhc
Confidence            10    11 1112  222   6899776655999999996 45888886310      0111122234444444443320


Q ss_pred             ----Hhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeee-eeEEEEEccCCC--CCCCCCC---c-cchHHHHHHH
Q 010250          395 ----YKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKS--PNEPFPP---E-WGIGAYFGAQ  461 (514)
Q Consensus       395 ----~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g-~~~~i~~~~~~~--~~~~~~~---~-~~~~~~~~~~  461 (514)
                          ..+  .+..+.++++.+++.+.|++.   ++ ...++.| .++++.+.....  .+...+.   . ......+++.
T Consensus       960 ~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~---Gi-~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~ 1035 (1082)
T PLN02672        960 KSSDLLDGVAEQKKILKSRAERLKETLEAC---GW-DVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREA 1035 (1082)
T ss_pred             cCcHHHHHHHHHHHHHHHHHHHHHHHHHHC---CC-eEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHH
Confidence                000  123455777777888887764   22 2233444 445554421100  0000000   0 0114568888


Q ss_pred             HHHC-CcEEEee-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          462 CEKH-GMLVRVS-----GDNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       462 l~~~-Gv~~~~~-----g~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      |+++ ||.+.++     .+.+||+  +..+++++++++++|++.++
T Consensus      1036 LLee~GVaV~PGs~FG~~g~~RIs--fa~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672       1036 ILKSTGLCINSSSWTGIPGYCRFS--FALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred             HHHcCCEEEecCcccCCCCeEEEE--ecCCHHHHHHHHHHHHHHHH
Confidence            8865 9999875     2569999  67789999999999998654

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=99.76  E-value=1.9e-16  Score=162.57  Aligned_cols=322  Identities=14%  Similarity=0.124  Sum_probs=194.5

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ  178 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A  178 (514)
                      +..++||..|.  +++| .+|.+.+++.+.......|    .  ...-.++.+.++++++ .+.+++++++|+++++..+
T Consensus        35 ~~~~i~l~~~~--~~~~-~~~~~~~al~~~~~~~~~Y----~--~~~g~~lr~~ia~~~~-~~~~~i~~t~G~~~~l~~~  104 (371)
T PRK05166         35 VPRIAKLGSNE--NPLG-PSPAVRRAFADIAELLRLY----P--DPQGRALREAIAARTG-VPADRIILGNGSEDLIAVI  104 (371)
T ss_pred             CcceEEcCCCC--CCCC-CCHHHHHHHHHHHHHhhcC----C--CCcHHHHHHHHHHHhC-cCHHHEEEcCCHHHHHHHH
Confidence            44789998774  4566 5788998887754433222    1  1111368888888874 3557899999999999888


Q ss_pred             HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250          179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN  258 (514)
Q Consensus       179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (514)
                      +....        ..++.|++.+++|.+....... .|...            ..++....+.             .+.+
T Consensus       105 ~~~~~--------~~gd~vli~~P~y~~~~~~~~~-~g~~~------------~~v~~~~~~~-------------~~~~  150 (371)
T PRK05166        105 CRAVL--------RPGDRVVTLYPSFPLHEDYPTM-MGARV------------ERVTVTPDLG-------------FDLD  150 (371)
T ss_pred             HHHhc--------CCCCEEEEcCCChHHHHHHHHH-cCCeE------------EEeecCCCCC-------------CCHH
Confidence            87653        3356788999999765322111 11111            0011100000             1146


Q ss_pred             HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceeccc-CCCCchh
Q 010250          259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDKY-SIKPDLV  336 (514)
Q Consensus       259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~~-gv~pDiv  336 (514)
                      ++++.+..   .....++..| ++.+|.+. +.+.+++|.++|++ ++++|+||++..|-..+.. ...... ...+.++
T Consensus       151 ~l~~~~~~---~~~~v~l~~p-~NPtG~~~-~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi  224 (371)
T PRK05166        151 ALCAAVAR---APRMLMFSNP-SNPVGSWL-TADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWI  224 (371)
T ss_pred             HHHHhhhc---CCCEEEEeCC-CCCCCCCC-CHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEE
Confidence            67666642   2223444455 55567655 45677777777764 8999999999877422211 111111 1122333


Q ss_pred             ---chhhhhc-CCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHH
Q 010250          337 ---SFAKALS-SAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPK  410 (514)
Q Consensus       337 ---~~sK~l~-gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~  410 (514)
                         +|||.++ .| +++|++++ ++++++.+...       .  ..++.+.++..++.+++..-+ -++..+.++++.+.
T Consensus       225 ~i~SfSK~~~l~G-lRiG~~i~~~~~l~~~~~~~-------~--~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~  294 (371)
T PRK05166        225 VLRTFSKAYGLAG-LRVGYGLVSDPELVGLLDRV-------R--TPFNVNGAAQAAALAALDDEEHLAKGVALALAERER  294 (371)
T ss_pred             EEeechHhhhcch-hheeeeecCCHHHHHHHHHh-------c--cCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence               6899887 45 89999775 68888887631       1  245567777777777764211 12334556666777


Q ss_pred             HHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCC
Q 010250          411 FQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMS  485 (514)
Q Consensus       411 l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t  485 (514)
                      +.+.|++.   ++ ......|.++++.+...             ...+.+.|.++||.+.++     .+.||++   ..+
T Consensus       295 l~~~L~~~---g~-~~~p~~g~fl~~~~~~~-------------~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~---~~~  354 (371)
T PRK05166        295 LKKELAEM---GY-RIAPSRANFLFFDARRP-------------ASAVAEALLRQGVIVKPWKQPGFETFIRVS---IGS  354 (371)
T ss_pred             HHHHHHHC---cC-eeCCCcCCEEEEeCCCC-------------HHHHHHHHHHCCeEEecCCCCCCCCeEEEE---cCC
Confidence            77777765   22 12344577777664311             345788999999999875     2469999   346


Q ss_pred             HHHHHHHHHHHHHHH
Q 010250          486 PEEVDELISKYGKAL  500 (514)
Q Consensus       486 ~e~id~~~~~l~~~l  500 (514)
                      +++.+++++.|++.+
T Consensus       355 ~~~~~~l~~~l~~i~  369 (371)
T PRK05166        355 PEENDHFVAALDKVL  369 (371)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            777888888777654

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=99.76  E-value=2.7e-16  Score=160.86  Aligned_cols=322  Identities=14%  Similarity=0.160  Sum_probs=192.2

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV  179 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al  179 (514)
                      ..++||..+.  ++++ .+|.+.+++.+.+.....|      +.....+|.+.|++++ ..+.++|++++|++|++..++
T Consensus        22 ~~~i~l~~~~--n~~~-~~~~~~~a~~~~~~~~~~Y------~~~~~~~Lr~aia~~~-~v~~~~I~it~G~~~~i~~~~   91 (360)
T PRK07392         22 DAILDFSASI--NPLG-PPESVIAAIQSALSALRHY------PDPDYRELRLALAQHH-QLPPEWILPGNGAAELLTWAG   91 (360)
T ss_pred             ccEEEeCCcC--CCCC-CCHHHHHHHHHHHHHhhcC------CCcCHHHHHHHHHHHh-CcChhhEEECCCHHHHHHHHH
Confidence            3678987553  5566 6789999988877643222      1112357778888877 346689999999999999888


Q ss_pred             HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250          180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN  259 (514)
Q Consensus       180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (514)
                      +...        + .+.|++.+++|.+........+.. ..            .++.....  ..+         .+..+
T Consensus        92 ~~l~--------~-g~~vlv~~P~y~~~~~~~~~~g~~-~~------------~v~~~~~~--~~~---------~~~~~  138 (360)
T PRK07392         92 RELA--------Q-LRAVYLITPAFGDYRRALRAFGAT-VK------------ELPLPLDQ--PSP---------GLTLR  138 (360)
T ss_pred             HHhC--------C-CCeEEEECCCcHHHHHHHHHcCCe-EE------------EEeccccc--CCc---------ccccC
Confidence            7542        3 358999999998875433332211 10            00100000  000         00122


Q ss_pred             HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecccCCCCchh--
Q 010250          260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPDLV--  336 (514)
Q Consensus       260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~~gv~pDiv--  336 (514)
                      ++++.... ......+++.| ++.+|.+.+    .++|.++++++++ +|+||+|..|...+.... .....-.+.++  
T Consensus       139 ~~~~~~~~-~~~~~~~l~nP-~NPTG~~~~----~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i  211 (360)
T PRK07392        139 LQTLPPQL-TPNDGLLLNNP-HNPTGKLWS----REAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIIL  211 (360)
T ss_pred             HHHHHHhc-cCCCEEEEeCC-CCCCCCCcC----HHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEE
Confidence            33333222 23445566666 566666665    4678888999985 666999998854442111 11112123333  


Q ss_pred             -chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHh
Q 010250          337 -SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQD  413 (514)
Q Consensus       337 -~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~  413 (514)
                       +|||.++ .| +++|++++++++++.+...       .  ..++.+.+++.++.++|+.-. .+...+.++++.+++.+
T Consensus       212 ~S~SK~~~l~G-lRiG~~v~~~~~~~~~~~~-------~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~  281 (360)
T PRK07392        212 RSLTKFYSLPG-LRLGYAIAHPDRLQRWQQW-------R--DPWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQ  281 (360)
T ss_pred             EechhhhcCCc-hheeeeeCCHHHHHHHHhh-------C--CCCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence             6899888 55 8999999999998887631       1  246677888888888775311 11234456666777777


Q ss_pred             hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEeeC-------CEEEEeCCCCCC
Q 010250          414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVSG-------DNIMMSPPFIMS  485 (514)
Q Consensus       414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g-------~~iRi~p~~~~t  485 (514)
                      .|+.+   +.+....+.|.++.+++...             ...+...+ .++||.+.++.       +.|||+   ..+
T Consensus       282 ~L~~~---~~~~~~~~~~~fl~~~~~~~-------------~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~---~~~  342 (360)
T PRK07392        282 GLASL---PGLTPLPSAANFLLVQSQGS-------------ALQLQEKLLQQHRILIRDCLSFPELGDRYFRVA---VRT  342 (360)
T ss_pred             HHHhC---CCcEECCCCCCEEEEEcCCC-------------HHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEE---eCC
Confidence            77654   22222234466666665321             23466665 56799998751       479999   334


Q ss_pred             HHHHHHHHHHHHHHH
Q 010250          486 PEEVDELISKYGKAL  500 (514)
Q Consensus       486 ~e~id~~~~~l~~~l  500 (514)
                      .++.+++.+.|++.+
T Consensus       343 ~~~~~~l~~al~~~~  357 (360)
T PRK07392        343 EAENQRLLEALAAIL  357 (360)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            455566666555443

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=99.76  E-value=2.3e-16  Score=159.79  Aligned_cols=309  Identities=17%  Similarity=0.226  Sum_probs=188.0

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT  177 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~  177 (514)
                      .|..++||..|.  ++++ .+|.+.+++.+.+......    ..+.....++.+.+++++. .+.+++++++++++++..
T Consensus        16 ~~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~----~Y~~~g~~~lr~~ia~~~~-~~~~~I~~t~G~~~~l~~   87 (337)
T PRK03967         16 EGNYRIWLDKNE--NPFD-LPEELKEEIFEELKRVPFN----RYPHITSDPLREAIAEFYG-LDAENIAVGNGSDELISY   87 (337)
T ss_pred             CCCceEEecCCC--CCCC-CCHHHHHHHHHHhhcCccc----cCCCCCHHHHHHHHHHHhC-cCcceEEEcCCHHHHHHH
Confidence            455678887664  4554 5688999998887542111    1122334678888888874 456899999999999987


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      +++..         + ++.|++.+++|........ ..|.+.            ..++....|.             .+.
T Consensus        88 ~~~~~---------~-gd~V~v~~P~y~~~~~~~~-~~g~~~------------~~v~~~~~~~-------------~d~  131 (337)
T PRK03967         88 LVKLF---------E-GKHIVITPPTFGMYSFYAK-LNGIPV------------IDVPLKEDFT-------------IDG  131 (337)
T ss_pred             HHHHh---------C-CCeEEEeCCChHHHHHHHH-HcCCeE------------EEeecCCCCC-------------cCH
Confidence            66542         2 4689999999975432211 112111            0111110011             113


Q ss_pred             HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh-
Q 010250          258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV-  336 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv-  336 (514)
                      +++++.+    ++....+++.| ++.+|.+.+    .++|.++++ +++++|+||+|..|.. ....  ......++++ 
T Consensus       132 ~~l~~~~----~~~~~v~~~~P-~NPtG~~~~----~~~l~~i~~-~~~~ii~De~y~~~~~-~~~~--~~~~~~~~vi~  198 (337)
T PRK03967        132 ERIAEKA----KNASAVFICSP-NNPTGNLQP----EEEILKVLE-TGKPVVLDEAYAEFSG-KSLI--GLIDEYPNLIL  198 (337)
T ss_pred             HHHHHhc----cCCCEEEEeCC-CCCCCCCCC----HHHHHHHHh-cCCEEEEECchhhhcc-cchH--HHHhhCCCEEE
Confidence            4555433    12334555666 666676665    467777774 7999999999987731 1111  1111123443 


Q ss_pred             --chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHH
Q 010250          337 --SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQ  412 (514)
Q Consensus       337 --~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~  412 (514)
                        +|||.++ .| +++|++++++++++.+...         ...++.+.++..++.++|+..+. .+......+.++.+.
T Consensus       199 l~S~SK~~~l~G-lRiG~iv~~~~~i~~~~~~---------~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~  268 (337)
T PRK03967        199 LRTFSKAFGLAG-IRAGYAIANEEIIDALYRI---------KPPFSLNILTMKIVRLALDHYDLIEERIDYIIKERERVR  268 (337)
T ss_pred             EecchHhhcchh-hhheeeecCHHHHHHHHhh---------cCCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence              6899988 45 8999999999999888742         12345677788888777753211 122334455555666


Q ss_pred             hhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC----CEEEEeCCCCCCHHH
Q 010250          413 DGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG----DNIMMSPPFIMSPEE  488 (514)
Q Consensus       413 ~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g----~~iRi~p~~~~t~e~  488 (514)
                      +.|.+.   .    ....|.++++.+.                  +.+.|.++||.+++.+    +.+||+   ..+.++
T Consensus       269 ~~L~~~---~----~~~~~~~~~~~~~------------------~~~~l~~~gi~v~~~~~~~~~~~Ri~---~~~~~~  320 (337)
T PRK03967        269 RELGEY---A----YPSDANFLLLKLD------------------AYDYLLENGIVVRKLSGRLEGHIRVT---VGKREE  320 (337)
T ss_pred             HHhccC---c----CCCCCcEEEEhHH------------------HHHHHHHCCEEEEeCCCCCCCeEEEe---cCCHHH
Confidence            666543   1    1234555555431                  4578889999997542    469999   457788


Q ss_pred             HHHHHHHHHHHHH
Q 010250          489 VDELISKYGKALK  501 (514)
Q Consensus       489 id~~~~~l~~~l~  501 (514)
                      .+++++.|++..+
T Consensus       321 ~~~l~~~l~~~~~  333 (337)
T PRK03967        321 NDEFIKALKEIKE  333 (337)
T ss_pred             HHHHHHHHHHHHH
Confidence            8888888877654

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=99.76  E-value=6.3e-17  Score=164.84  Aligned_cols=282  Identities=15%  Similarity=0.170  Sum_probs=175.2

Q ss_pred             hHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCC
Q 010250          145 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF  224 (514)
Q Consensus       145 ~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~  224 (514)
                      ...++.+.+++.++ .+.++|++++|++|++..+++...       .++++.|++.+++|..+...+... |.+.     
T Consensus        58 ~~~~l~~~~a~~~g-~~~~~I~~~~Gs~e~i~~~~~~~~-------~~g~~~vli~~P~y~~y~~~~~~~-G~~~-----  123 (351)
T PRK01688         58 QPKAVIENYAAYAG-VKPEQVLVSRGADEGIELLIRAFC-------EPGKDAILYCPPTYGMYSVSAETI-GVEI-----  123 (351)
T ss_pred             ChHHHHHHHHHHhC-CCHHHEEEcCCHHHHHHHHHHHhc-------CCCCCEEEEcCCCHHHHHHHHHHc-CCEE-----
Confidence            34788889988874 467899999999999999998653       133468999999997654322211 1111     


Q ss_pred             CCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 010250          225 DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY  304 (514)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~  304 (514)
                             ..++....|.             .+++++++.+.    +....+++.| ++.+|.+. +.+.+++|.+.|++ 
T Consensus       124 -------~~v~~~~~~~-------------~d~~~l~~~~~----~~~lv~l~nP-nNPTG~~~-~~~~l~~l~~~~~~-  176 (351)
T PRK01688        124 -------RTVPTLDNWQ-------------LDLPAIADNLD----GVKVVYVCSP-NNPTGNLI-NPQDLRTLLELTRG-  176 (351)
T ss_pred             -------EEeecCCCCC-------------CCHHHHHHhcc----CCcEEEEeCC-CCCCCCCC-CHHHHHHHHHhCCC-
Confidence                   1111111111             01355555441    2334555555 45556555 55677888888876 


Q ss_pred             CCEEEEechhcCcccccccceecccCCCCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCc
Q 010250          305 DILFIADEVICAFGRLGTMFGCDKYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH  381 (514)
Q Consensus       305 gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~  381 (514)
                      ++++|+||+|..|....  .........+.++   +|||+++-+++++|++++++++++.+...         ...|+.+
T Consensus       177 ~~~vivDEay~~f~~~~--s~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~---------~~~~~v~  245 (351)
T PRK01688        177 KAIVVADEAYIEFCPQA--SLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLKV---------IAPYPLS  245 (351)
T ss_pred             CcEEEEECchhhcCCCC--ChHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCHHHHHHHHhc---------cCCCCCC
Confidence            68999999998774211  1111122234543   68998873338999999999999888742         1235556


Q ss_pred             HHHHHHHHHHHHHH--h-hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHH
Q 010250          382 PVSCAVAIEALKIY--K-ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYF  458 (514)
Q Consensus       382 pl~~aaa~aal~~~--~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~  458 (514)
                      .+++.+|.++|+.-  + -++..+.+.+.++++.+.|+++....  ......+.++.+.+.+              ...+
T Consensus       246 ~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~--~~~ps~~nfi~~~~~~--------------~~~l  309 (351)
T PRK01688        246 TPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVE--QVFDSETNYILARFTA--------------SSAV  309 (351)
T ss_pred             HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCC--eECCCCCcEEEEEcCC--------------HHHH
Confidence            66677777777521  1 11234555666777877777652111  1123345566665531              3457


Q ss_pred             HHHHHHCCcEEEeeC------CEEEEeCCCCCCHHHHHHHHHHHH
Q 010250          459 GAQCEKHGMLVRVSG------DNIMMSPPFIMSPEEVDELISKYG  497 (514)
Q Consensus       459 ~~~l~~~Gv~~~~~g------~~iRi~p~~~~t~e~id~~~~~l~  497 (514)
                      .+.|+++||+++..+      +++|++   ..+++|+++++++|+
T Consensus       310 ~~~L~~~gi~vr~~~~~~~~~~~iRis---~~~~~e~~~l~~al~  351 (351)
T PRK01688        310 FKSLWDQGIILRDQNKQPGLSNCLRIT---IGTREECQRVIDALR  351 (351)
T ss_pred             HHHHHHCCeEEEECCCcCCCCCeEEEe---CCCHHHHHHHHHhhC
Confidence            889999999998642      569999   458899999998873

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.76  E-value=5e-16  Score=159.40  Aligned_cols=305  Identities=14%  Similarity=0.158  Sum_probs=188.0

Q ss_pred             chHHHHHHHHHHhcCcCC-CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccce-eeeecCCCcccc
Q 010250          144 KPSLDLAKELLEMFTASK-MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL-IAASLSGLPALH  221 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~-~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~-~~~~~s~~~~~~  221 (514)
                      +...++.+.++++++... .+.+++++||+++++.++....        ..++++++.+.+|+|... ......|...  
T Consensus        37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~--------~~~~~vlv~~~~~~~~~~~~~~~~~g~~~--  106 (368)
T PRK13479         37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLV--------PRDGKVLVPDNGAYGARIAQIAEYLGIAH--  106 (368)
T ss_pred             HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhcc--------CCCCeEEEEeCCchHHHHHHHHHHcCCcE--
Confidence            456788888888885422 3568899999999999998663        234577777777766531 1111111111  


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                                ..++.+..+             ..+.+++++.+.+.  .++..|.+..+++.+|.+.|    +++|.++|
T Consensus       107 ----------~~i~~~~~~-------------~~d~~~l~~~l~~~--~~~~~v~~~~~~~~tG~~~~----~~~i~~l~  157 (368)
T PRK13479        107 ----------VVLDTGEDE-------------PPDAAEVEAALAAD--PRITHVALVHCETTTGILNP----LDEIAAVA  157 (368)
T ss_pred             ----------EEEECCCCC-------------CCCHHHHHHHHHhC--CCCcEEEEEcccCccccccC----HHHHHHHH
Confidence                      111111100             01147777776532  23445555555666788877    89999999


Q ss_pred             HhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccceeEEeCHHHHHHhhhccCCCC-c----c--
Q 010250          302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG-S----F--  372 (514)
Q Consensus       302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~-~----~--  372 (514)
                      +++|+++|+|.+|+ ||..  .  .+.....+|+++  ++|++.|+ .++|++++++++++.+........ .    .  
T Consensus       158 ~~~~~~livDa~~~-~g~~--~--~~~~~~~~d~~v~s~~K~l~g~-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (368)
T PRK13479        158 KRHGKRLIVDAMSS-FGAI--P--IDIAELGIDALISSANKCIEGV-PGFGFVIARRSELEACKGNSRSLSLDLYDQWAY  231 (368)
T ss_pred             HHcCCEEEEEcccc-cCCc--c--ccccccCceEEEecCccccccC-CCceEEEECHHHHHHhhcCCCCeeecHHHHHhh
Confidence            99999999998875 6532  2  222233467764  56988764 457999999998887764211100 0    0  


Q ss_pred             ---cccCCCCCcHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHHhhhhhccCCCceeE-EEeeeeeEEEEEccCCCC
Q 010250          373 ---SHGFTYSGHPVSCAVAIEALKIYKE----RNIVEQVNKIAPKFQDGVKAFSDSPIIGE-IRGTGLILGTEFADNKSP  444 (514)
Q Consensus       373 ---~~~~t~~~~pl~~aaa~aal~~~~~----~~~~~~~~~~~~~l~~~L~~l~~~~~~~~-v~g~g~~~~i~~~~~~~~  444 (514)
                         .....|+.+..+.++..++++.+.+    ++..+++.++.+++++.|+++ +...... ....+.+..+.+......
T Consensus       232 ~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~  310 (368)
T PRK13479        232 MEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFHAPADPAY  310 (368)
T ss_pred             hcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEECCCCCCc
Confidence               0111235566666666777776643    244577888888888888776 2221111 011122334443322100


Q ss_pred             CCCCCCccchHHHHHHHHHHCCcEEEee----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          445 NEPFPPEWGIGAYFGAQCEKHGMLVRVS----GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       445 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                               ....+.+.|.++||.++++    .+.+|++.....|++|++++++.|+++++++
T Consensus       311 ---------~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~  364 (368)
T PRK13479        311 ---------DFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVDAADIRRLVAAIAEALYWM  364 (368)
T ss_pred             ---------CHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence                     1345788999999999864    2479998756779999999999999988653

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=99.75  E-value=8.8e-16  Score=159.76  Aligned_cols=348  Identities=11%  Similarity=0.054  Sum_probs=193.4

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc--ccccccCCchHHHHHHHHHHhc----C-cCCCCeEEEeCCh
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY--HSFWNRTTKPSLDLAKELLEMF----T-ASKMAKVFFTNSG  171 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~--~~~~~~~~~~~~ela~~L~~~~----~-~~~~~~v~~~~sG  171 (514)
                      |..++|+..|.  ..++ .+|.+.+++.+.+......  ...++ +.....+|.+.|++++    + ....++|++++++
T Consensus        33 ~~~~i~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga  108 (409)
T PRK07590         33 EAKIIRLGIGD--VTQP-LPPAVIEAMHKAVDEMGTAETFRGYG-PEQGYDFLREKIAENDYQARGCDISADEIFISDGA  108 (409)
T ss_pred             CCceEEecCcC--CCCC-CCHHHHHHHHHHHhcccccCCccCCC-CCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCH
Confidence            56788987774  3344 4788999998887653110  00011 2222344555555543    1 2356899999999


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhH
Q 010250          172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE  251 (514)
Q Consensus       172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (514)
                      .+|+...+.+.         ..+++|++.+++|.+........+.... ....+.. ..+..++....          ..
T Consensus       109 ~~al~~l~~~~---------~~gd~V~v~~P~Y~~~~~~~~~~g~~~~-~~~~~~~-~~~~~v~~~~~----------~~  167 (409)
T PRK07590        109 KCDTGNILDIF---------GPDNTIAVTDPVYPVYVDTNVMAGRTGE-ANEDGRY-SGIVYLPCTAE----------NN  167 (409)
T ss_pred             HHHHHHHHHhc---------CCCCEEEEeCCCCcchHHHHHHcCCccc-ccccccc-cceeEeecccc----------cC
Confidence            99988754322         2356899999999886533332221100 0000000 00111111000          00


Q ss_pred             HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccC
Q 010250          252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYS  330 (514)
Q Consensus       252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~g  330 (514)
                      +    ..+++    +  ++..+.+++.| ++.+|.+ .+.+.+++|.++|++||+++|.||+|..|-..+... ......
T Consensus       168 ~----~~d~~----~--~~~k~i~l~nP-~NPTG~~-~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~  235 (409)
T PRK07590        168 F----VPELP----E--EKVDIIYLCFP-NNPTGTV-LTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIE  235 (409)
T ss_pred             C----cccCc----c--cCceEEEEeCC-CCCcCCc-CCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCC
Confidence            0    00111    1  12234455556 5555654 467889999999999999999999998774333211 111111


Q ss_pred             CCCc-hh---chhhhhcCCcccceeEEeCHHHHHHhhhccC----CCCcccccCCC-CCcHHHHHHHHHHHHH-Hh--hc
Q 010250          331 IKPD-LV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSN----TLGSFSHGFTY-SGHPVSCAVAIEALKI-YK--ER  398 (514)
Q Consensus       331 v~pD-iv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~----~~~~~~~~~t~-~~~pl~~aaa~aal~~-~~--~~  398 (514)
                      -.++ ++   +|||.++-.++++|++++++++++.+.....    .........++ +.+.+++.++.++++. ..  -+
T Consensus       236 ~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~  315 (409)
T PRK07590        236 GARECAIEFRSFSKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIK  315 (409)
T ss_pred             CcccceEEEecCccccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHH
Confidence            1122 22   6899886333999999999998873210000    00000111222 3566777777666642 11  12


Q ss_pred             cHHHHHHHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeC---
Q 010250          399 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG---  473 (514)
Q Consensus       399 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g---  473 (514)
                      ++.+.++++.+.+.+.|++.   + +....+ -|.++++.+.+...           ...+...++ +.||++.++.   
T Consensus       316 ~~~~~~~~~r~~l~~~L~~~---~-~~~~~~~g~~f~wi~~~~~~~-----------~~~~~~~l~~~~gv~v~pg~~f~  380 (409)
T PRK07590        316 ELIDYYMENAKIIREGLESA---G-FEVYGGVNAPYIWVKTPDGMS-----------SWDFFDKLLQEANVVGTPGSGFG  380 (409)
T ss_pred             HHHHHHHHHHHHHHHHHHhc---C-CceecCCcceEEEEECCCCCC-----------HHHHHHHHHHHCCEEEeChhHhC
Confidence            34566777777777777764   2 112233 35677888754210           234666665 5799988642   


Q ss_pred             ----CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          474 ----DNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       474 ----~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                          +.|||+  +..+++++++++++|.+++
T Consensus       381 ~~~~~~iRi~--~~~~~~~l~~~l~rl~~~~  409 (409)
T PRK07590        381 PSGEGYFRLS--AFGSRENVLEAMERIKKAL  409 (409)
T ss_pred             CCCCCEEEEE--ccCCHHHHHHHHHHHHhhC
Confidence                469999  5678999999999998753

>PLN02651 cysteine desulfurase

Probab=99.75  E-value=1.4e-16  Score=163.25  Aligned_cols=323  Identities=18%  Similarity=0.183  Sum_probs=189.9

Q ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHhcCC-cccc----ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250          102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHS----FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND  176 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~----~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~  176 (514)
                      |||..+.      +.-++++.+++.+.+.... ..+.    ......+...++.++++++++. +.+.++|++||++|+.
T Consensus         2 Yld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~-~~~~v~~t~~~t~a~~   74 (364)
T PLN02651          2 YLDMQAT------TPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGA-DPKEIIFTSGATESNN   74 (364)
T ss_pred             cccCcCC------CCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCC-CCCeEEEeCCHHHHHH
Confidence            6665433      3468899999988875321 1100    0001134456777888888853 4578999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee--cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS--LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~--~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      .+++.+....   . .++++||+.+..|+........  ..|..            +..++....++             
T Consensus        75 ~~l~~~~~~~---~-~~g~~vl~~~~~h~s~~~~~~~~~~~g~~------------v~~v~~~~~~~-------------  125 (364)
T PLN02651         75 LAIKGVMHFY---K-DKKKHVITTQTEHKCVLDSCRHLQQEGFE------------VTYLPVKSDGL-------------  125 (364)
T ss_pred             HHHHHHHHhc---c-CCCCEEEEcccccHHHHHHHHHHHhcCCE------------EEEEccCCCCc-------------
Confidence            9998764221   1 2345677765555442111111  11111            11111111000             


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCc
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD  334 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pD  334 (514)
                      .+.+++++.+.    ++++++++..+++.+|.+.|    +++|.++|++||+++++|.+|+ +|..    .++...+.+|
T Consensus       126 ~d~~~l~~~i~----~~t~lv~v~~~~n~tG~~~~----l~~I~~~~~~~g~~~~vD~a~~-~g~~----~~~~~~~~~D  192 (364)
T PLN02651        126 VDLDELAAAIR----PDTALVSVMAVNNEIGVIQP----VEEIGELCREKKVLFHTDAAQA-VGKI----PVDVDDLGVD  192 (364)
T ss_pred             CCHHHHHHhcC----CCcEEEEEECCCCCceeccc----HHHHHHHHHHcCCEEEEEcchh-hCCc----ccCcccCCCC
Confidence            11467777664    35778888888889999988    9999999999999999999997 4432    2233334469


Q ss_pred             hhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccC-CCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHH
Q 010250          335 LVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF-TYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAP  409 (514)
Q Consensus       335 iv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~-t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~  409 (514)
                      ++++|  | +.|+ ..+|+++++++..+.+.+.... +....+. ....|..++.+..++|+.+.+  +++.++.+++.+
T Consensus       193 ~~~~s~hK-~~gp-~G~g~l~v~~~~~~~l~p~~~g-~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~  269 (364)
T PLN02651        193 LMSISGHK-IYGP-KGVGALYVRRRPRVRLEPLMSG-GGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRE  269 (364)
T ss_pred             EEEechhh-hCCC-CceEEEEEcCCCCCCCCccccC-CCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence            88775  7 5443 5689999998776655432100 0000001 123345566666777877654  345677788888


Q ss_pred             HHHhhhhh-ccCCCceeE--E-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------------
Q 010250          410 KFQDGVKA-FSDSPIIGE--I-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------------  472 (514)
Q Consensus       410 ~l~~~L~~-l~~~~~~~~--v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------------  472 (514)
                      ++++.|++ +.+..+...  . .....++.|.+....            ...+...|.+  |.++.+             
T Consensus       270 ~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~------------~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~  335 (364)
T PLN02651        270 RLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVE------------GESLLMGLKE--VAVSSGSACTSASLEPSYV  335 (364)
T ss_pred             HHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCCC------------HHHHHHHhCC--EEEEchhhcCCCCCCcCHH
Confidence            88888764 322222221  0 112335566553211            3345566643  555421             


Q ss_pred             -----------CCEEEEeCCCCCCHHHHH
Q 010250          473 -----------GDNIMMSPPFIMSPEEVD  490 (514)
Q Consensus       473 -----------g~~iRi~p~~~~t~e~id  490 (514)
                                 .+.+|+++...+|++|||
T Consensus       336 ~~~~g~~~~~~~~~vR~S~~~~~t~~did  364 (364)
T PLN02651        336 LRALGVPEEMAHGSLRLGVGRFTTEEEVD  364 (364)
T ss_pred             HHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence                       146999999999999985

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=99.74  E-value=7.1e-16  Score=163.23  Aligned_cols=309  Identities=12%  Similarity=0.095  Sum_probs=179.5

Q ss_pred             chHHHHHHHHHHhcC---cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccc
Q 010250          144 KPSLDLAKELLEMFT---ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL  220 (514)
Q Consensus       144 ~~~~ela~~L~~~~~---~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~  220 (514)
                      +....+++.+.+.++   ..+.++|++++|+++|++.++....        ..++.|++.++.|.+.........|... 
T Consensus        98 ~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~--------~pGD~Vlv~~P~Y~~~~~~~~~~~G~~v-  168 (496)
T PLN02376         98 KFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLA--------DPGDVFLIPSPYYAAFDRDLRWRTGVEI-  168 (496)
T ss_pred             HHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhC--------CCCCEEEECCCCccchHHHHHhhCCCEE-
Confidence            344445555544322   1356899999999999999998763        3357899999999887432221122211 


Q ss_pred             cCCCCCCCCcccccCCC--CcccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHH
Q 010250          221 HQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEK  296 (514)
Q Consensus       221 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~  296 (514)
                                 ..+++.  +.|+             .+.+.++..+...  ...++.+|++...++.+|.+. +++.+++
T Consensus       169 -----------v~v~~~~~~~~~-------------~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~-s~e~l~~  223 (496)
T PLN02376        169 -----------IPVPCSSSDNFK-------------LTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTML-DKDTLTN  223 (496)
T ss_pred             -----------EEEeCCCCccCc-------------CCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccC-CHHHHHH
Confidence                       111111  1111             1135555443221  123455444444455666544 6789999


Q ss_pred             HHHHHHhcCCEEEEechhcCccccccccee--cc---cC---CCCch----hchhhhhcCCcccceeEEe-CHHHHHHhh
Q 010250          297 VQAVVKKYDILFIADEVICAFGRLGTMFGC--DK---YS---IKPDL----VSFAKALSSAYMPIGAILV-SPEVSEVIH  363 (514)
Q Consensus       297 l~~l~~~~gillI~DEv~tG~gr~G~~~~~--~~---~g---v~pDi----v~~sK~l~gG~~pig~v~~-~~~i~~~l~  363 (514)
                      |.++|++||+++|+||+|..+-..+..+..  +.   ++   ..+|.    -+|||.++-.++++|++++ ++.+.+.+.
T Consensus       224 L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~  303 (496)
T PLN02376        224 LVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCAR  303 (496)
T ss_pred             HHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHH
Confidence            999999999999999999976444432211  11   11   12342    2689988643399999998 466666554


Q ss_pred             hccCCCCcccccCCCCCcHHHHHHHHHHHHHH---hh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEE
Q 010250          364 SQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY---KE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEF  438 (514)
Q Consensus       364 ~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~  438 (514)
                      ..       .  ..+..+.+++.++.+.|+--   ++  ....++++++.+.+.+.|++. ..+..  ...-|+++++++
T Consensus       304 ~~-------~--~~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~--~~~aG~flwi~l  371 (496)
T PLN02376        304 KM-------S--SFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACL--TSNAGLFAWMDL  371 (496)
T ss_pred             HH-------h--hcCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc--CCCceEEEEEEc
Confidence            21       1  11224556666665555311   11  112445566666676777653 22221  123468889988


Q ss_pred             ccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEeeC-------CEEEEeCCCC-CCHHHHHHHHHHHHHHHHHHH
Q 010250          439 ADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVSG-------DNIMMSPPFI-MSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       439 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~g-------~~iRi~p~~~-~t~e~id~~~~~l~~~l~~~~  504 (514)
                      ........    .......+++.+.+ .||.+.|+.       +++||+  +. .+++++++++++|.+++.+..
T Consensus       372 ~~~~~~~~----~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~--fa~~~~~~l~~al~rl~~~l~~~~  440 (496)
T PLN02376        372 RHLLRDRN----SFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRIC--FANMDDDTLHVALGRIQDFVSKNK  440 (496)
T ss_pred             hhhhccCC----chhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEE--eeCCCHHHHHHHHHHHHHHHHHhh
Confidence            54211100    00112346676765 599998742       479999  55 578999999999999987544

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=99.74  E-value=1.2e-15  Score=159.70  Aligned_cols=308  Identities=11%  Similarity=0.115  Sum_probs=178.1

Q ss_pred             CCchHHHHHHHHHHhcC---cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc
Q 010250          142 TTKPSLDLAKELLEMFT---ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP  218 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~---~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~  218 (514)
                      .......+++.+.+.++   +.+.+++++++++++|++.++.+..        ..++.|++.++.|.+.........+..
T Consensus        97 ~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~--------~pGD~Vlv~~P~Y~~f~~~~~~~~g~~  168 (447)
T PLN02607         97 LKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILA--------DPGDALLVPTPYYPGFDRDLRWRTGVK  168 (447)
T ss_pred             hHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhC--------CCCCEEEEcCCCCcchHHHHHhcCCcE
Confidence            44445556666655443   2356789999999999998877553        345789999999988643221112211


Q ss_pred             cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEE-EEEEccccCCCCcccCChhHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIA-AFIAEPVIGAGGVIPPPATYFE  295 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~a-avivEpv~~~~G~~~p~~~~L~  295 (514)
                      .            ..+++...          +.| ..+.+.+++.+.+.  ...++. .+++.|. +..|. +.+++.++
T Consensus       169 v------------v~v~~~~~----------~~f-~~~~~~le~a~~~a~~~~~~vk~lll~nP~-NPtG~-~~s~e~l~  223 (447)
T PLN02607        169 I------------VPIHCDSS----------NNF-QVTPQALEAAYQEAEAANIRVRGVLITNPS-NPLGA-TVQRSVLE  223 (447)
T ss_pred             E------------EEEeCCCC----------CCC-cCCHHHHHHHHHHHHHhCCCeeEEEEeCCC-CCcCc-ccCHHHHH
Confidence            1            11111000          001 01246677666532  123454 5555554 45554 44678999


Q ss_pred             HHHHHHHhcCCEEEEechhcCccccccccee--c---ccCC-C-Cc-hh---chhhhhcCCcccceeEEe-CHHHHHHhh
Q 010250          296 KVQAVVKKYDILFIADEVICAFGRLGTMFGC--D---KYSI-K-PD-LV---SFAKALSSAYMPIGAILV-SPEVSEVIH  363 (514)
Q Consensus       296 ~l~~l~~~~gillI~DEv~tG~gr~G~~~~~--~---~~gv-~-pD-iv---~~sK~l~gG~~pig~v~~-~~~i~~~l~  363 (514)
                      +|.++|++||+++|+||+|.++-..+..+..  +   ..+. . ++ ++   +|||.++..++++|++++ +++++..+.
T Consensus       224 ~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~  303 (447)
T PLN02607        224 DILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTAR  303 (447)
T ss_pred             HHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHH
Confidence            9999999999999999999864222222211  1   1111 1 33 22   689988743389999998 677777665


Q ss_pred             hccCCCCcccccCCC-CCcHHHHHHHHHHHHH---Hhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEE
Q 010250          364 SQSNTLGSFSHGFTY-SGHPVSCAVAIEALKI---YKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTE  437 (514)
Q Consensus       364 ~~~~~~~~~~~~~t~-~~~pl~~aaa~aal~~---~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~  437 (514)
                      ..          ..+ ..+.+++.++.+.|+-   .++  +...+++++..+.+.+.|++. ..+..  ...-|++++++
T Consensus       304 ~~----------~~~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~--~~~ag~fvw~~  370 (447)
T PLN02607        304 RM----------SSFTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECL--KGNAGLFCWMN  370 (447)
T ss_pred             HH----------hhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcc--cCCeeEEEEEE
Confidence            31          112 2344555555444431   100  112344555555666666654 22221  12347888998


Q ss_pred             EccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEeeC-------CEEEEeCCCC-CCHHHHHHHHHHHHHHHHH
Q 010250          438 FADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVSG-------DNIMMSPPFI-MSPEEVDELISKYGKALKA  502 (514)
Q Consensus       438 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~g-------~~iRi~p~~~-~t~e~id~~~~~l~~~l~~  502 (514)
                      +.......     .+.....++..+++ .||.+.|+.       +++|++  +. .+++++++++++|.+++++
T Consensus       371 L~~~~~~~-----~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~--fa~~~~~~l~~gl~Ri~~~l~~  437 (447)
T PLN02607        371 LSPLLETP-----TREGELALWDSILREVKLNISPGSSCHCSEPGWFRVC--FANMSEDTLEVALKRIHRFMDR  437 (447)
T ss_pred             chHhhcCC-----CchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEE--eccCCHHHHHHHHHHHHHHHHH
Confidence            85421100     01112346666654 799998742       579999  66 4899999999999999864

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=99.74  E-value=2.4e-15  Score=156.97  Aligned_cols=349  Identities=15%  Similarity=0.111  Sum_probs=191.6

Q ss_pred             EEEEccCCcccccCCCCC--HHHHHHHHHHHhcCCc-----cccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChh
Q 010250          101 KYLDSLAGLWCTALGGSE--PRLVAAATAQLNTLPF-----YHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGS  172 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~--p~v~~A~~~~l~~~~~-----~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGs  172 (514)
                      ..|||..|..   .-...  +.+.+++.+.+++...     .+....+..+....+++.+....+ ....++|++++|+.
T Consensus        31 ~~i~l~~g~p---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~  107 (416)
T PRK09440         31 GAIMLGGGNP---AHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQ  107 (416)
T ss_pred             CceeccCCCC---CccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChH
Confidence            3588876632   11121  3456666665543211     111111222334444444443322 23567899999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEE-EecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhH
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIA-RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE  251 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~-~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (514)
                      +|+..++++....   .....++.|++ .+++|++....+.......    ...   +.+..++ .+.+.          
T Consensus       108 ~al~~~~~~l~~~---~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~----~~~---~~~~~~~-~~~~~----------  166 (416)
T PRK09440        108 SAFFYLFNLFAGR---RADGSLKKILFPLAPEYIGYADAGLEEDLFV----SYR---PNIELLP-EGQFK----------  166 (416)
T ss_pred             HHHHHHHHHHhcc---ccCCCCCeEEEecCCCchhhHHHhhccCcee----ecc---ccccccc-ccccc----------
Confidence            9999988766310   00012457888 6999998753221111000    000   0000000 00000          


Q ss_pred             HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccC
Q 010250          252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYS  330 (514)
Q Consensus       252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~g  330 (514)
                      + ..+++.|+  +   ..+..+.+++.| ++.+|.+. +.+.+++|.++|++||+++|+||+|..+ .....+ .... .
T Consensus       167 ~-~~d~~~l~--~---~~~~~~i~l~~P-~NPTG~~~-s~~~~~~l~~~a~~~~~~iI~De~Y~~~-~~~~~~~~~~~-~  236 (416)
T PRK09440        167 Y-HVDFEHLH--I---DEDTGAICVSRP-TNPTGNVL-TDEELEKLDALARQHNIPLLIDNAYGPP-FPGIIFSEATP-L  236 (416)
T ss_pred             c-CCCHHHcc--c---CCCceEEEEecC-CCCCCccC-CHHHHHHHHHHHHHcCCcEEEeCCcccc-CCCcchhhcCc-c
Confidence            0 00134443  1   222334445555 56667654 6788999999999999999999999632 111000 0000 1


Q ss_pred             CCCch---hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--h---ccHHH
Q 010250          331 IKPDL---VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--E---RNIVE  402 (514)
Q Consensus       331 v~pDi---v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~---~~~~~  402 (514)
                      ..+.+   -+|||....| +++|++++++++++.+...       ......+.+.+++.++.++++.-.  +   +.+..
T Consensus       237 ~~~~vI~~~SfSK~~~pG-lRiG~~i~~~~l~~~~~~~-------~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~  308 (416)
T PRK09440        237 WNPNIILCMSLSKLGLPG-VRCGIVIADEEIIEALSNM-------NGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRP  308 (416)
T ss_pred             ccCCeEEEecccccCCCc-ceEEEEeCCHHHHHHHHHH-------HHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHH
Confidence            12233   3689953334 9999999999998888642       111234557777777777764211  1   11233


Q ss_pred             HHHHHHHHHHhhhhhc-cCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----C--
Q 010250          403 QVNKIAPKFQDGVKAF-SDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----G--  473 (514)
Q Consensus       403 ~~~~~~~~l~~~L~~l-~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g--  473 (514)
                      .++++.+.+++.|++. .... ....... |.++++++.+...          ....+...|.++||.+.++     +  
T Consensus       309 ~~~~r~~~~~~~L~~~l~~~~-~~~~~p~gg~fiw~~~~~~~~----------~~~~~~~~l~~~gV~v~pg~~F~~~~~  377 (416)
T PRK09440        309 FYRQKVQLAIALLRRYLPDEP-CLIHKPEGAIFLWLWFKDLPI----------TTEELYQRLKARGVLVVPGHYFFPGLD  377 (416)
T ss_pred             HHHHHHHHHHHHHHHhcccCC-eEEecCCCceEEEEECCCCCC----------CHHHHHHHHHHCCEEEechHhhCCCCc
Confidence            4455556666666543 2222 2222343 6777887754110          1345778888999999863     1  


Q ss_pred             -------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          474 -------DNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       474 -------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                             +++||+  +..+++++++++++|.+++++..
T Consensus       378 ~~~~~~~~~iRis--~~~~~~~l~~~i~~l~~~~~~~~  413 (416)
T PRK09440        378 EDWPHAHQCIRMN--YVQDDEEIEKGIAILAEEVEKAY  413 (416)
T ss_pred             cccCCcCceEEEE--ecCCHHHHHHHHHHHHHHHHHHh
Confidence                   269999  55689999999999999987644

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=99.74  E-value=3.8e-16  Score=161.79  Aligned_cols=335  Identities=12%  Similarity=0.082  Sum_probs=191.4

Q ss_pred             EEEEccCCcccccCCCCC--HHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcCc-----CCCCeE--EEeCC
Q 010250          101 KYLDSLAGLWCTALGGSE--PRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTA-----SKMAKV--FFTNS  170 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~--p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~~-----~~~~~v--~~~~s  170 (514)
                      ..|||..|....+-++-+  +.+.+++.+.++.... .+.    +.....+|.+.+++++..     ...+++  ++|+|
T Consensus        27 ~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~----~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~G  102 (396)
T PRK09257         27 DKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYL----PIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPG  102 (396)
T ss_pred             CcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcC----CCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCC
Confidence            468888775433323333  6788887776643211 111    222234455555554421     135666  89999


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCCCCC
Q 010250          171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHPGET  248 (514)
Q Consensus       171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  248 (514)
                      +++|+..++++....      ..++.|++.+++|.+........+....             .++.  ++.|        
T Consensus       103 a~~al~~~~~~l~~~------~pGd~Vlv~~P~y~~~~~~~~~~g~~~v-------------~v~~~~~~~~--------  155 (396)
T PRK09257        103 GTGALRVGADFLKRA------FPDAKVWVSDPTWPNHRAIFEAAGLEVK-------------TYPYYDAATK--------  155 (396)
T ss_pred             ccHHHHHHHHHHHHh------CCCCeEEECCCCcccHHHHHHHcCCcEE-------------EEeccccccC--------
Confidence            999999998754211      2347899999999887543333222211             1111  0001        


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc-cc-ccee
Q 010250          249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL-GT-MFGC  326 (514)
Q Consensus       249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~-G~-~~~~  326 (514)
                           ..+++++++.+.+..+ +..++++...++.+|.+ .+++.+++|.++|++||+++|.||+|.+|... +. ....
T Consensus       156 -----~~d~~~l~~~~~~~~~-~~~~~i~~~p~NPTG~~-~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~  228 (396)
T PRK09257        156 -----GLDFDAMLADLSQAPA-GDVVLLHGCCHNPTGAD-LTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGL  228 (396)
T ss_pred             -----ccCHHHHHHHHHhCCC-CCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHH
Confidence                 1125777777654322 23455545556666754 46789999999999999999999999987532 11 1111


Q ss_pred             -cccCCCCchh---chhhhhcC-CcccceeEEe---CHHH----HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH
Q 010250          327 -DKYSIKPDLV---SFAKALSS-AYMPIGAILV---SPEV----SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI  394 (514)
Q Consensus       327 -~~~gv~pDiv---~~sK~l~g-G~~pig~v~~---~~~i----~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~  394 (514)
                       ...+..+.++   +|||.++- | +++|++++   +++.    +..+..       .......+.+++++.++.+.|+.
T Consensus       229 ~~~~~~~~~vi~i~SfSK~~~~~G-lRiG~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~q~~~~~~l~~  300 (396)
T PRK09257        229 RAFAAAGLELLVASSFSKNFGLYG-ERVGALSVVAEDAEEADRVLSQLKA-------TIRTNYSNPPAHGAAIVATILND  300 (396)
T ss_pred             HHHHhcCCcEEEEEEcCCcCcccc-ccceeEEEEeCCHHHHHHHHHHHHH-------HhhhhcCCCcHHHHHHHHHHhCC
Confidence             1111122333   68998885 5 89999873   4443    333321       01112223456666666555532


Q ss_pred             H------hh--ccHHHHHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250          395 Y------KE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH  465 (514)
Q Consensus       395 ~------~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  465 (514)
                      -      .+  ++..++++++.+.+.+.|+++......... ..-|+++++.+.+               +.+.+.+.++
T Consensus       301 ~~~~~~~~~~~~~~r~~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l~~---------------~~~~~l~~~~  365 (396)
T PRK09257        301 PELRAEWEAELEEMRERIKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGLTP---------------EQVDRLREEF  365 (396)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccccceEEEecCCCH---------------HHHHHHHHcC
Confidence            1      11  235667777778888888765110011112 2235556665421               2244555678


Q ss_pred             CcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          466 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       466 Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      ||.+.+.+   ||+.. ..++++|++++++|.+++
T Consensus       366 ~V~~~p~~---ri~~~-~~~~~~i~~~~~~i~~~~  396 (396)
T PRK09257        366 GVYAVGSG---RINVA-GLNESNIDYVAEAIAAVL  396 (396)
T ss_pred             CEEEcCCC---eEEEe-eCCHHHHHHHHHHHHhhC
Confidence            99988754   88831 389999999999998753

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.74  E-value=7.6e-16  Score=156.93  Aligned_cols=305  Identities=15%  Similarity=0.154  Sum_probs=187.3

Q ss_pred             HHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEec
Q 010250          123 AAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK  202 (514)
Q Consensus       123 ~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~  202 (514)
                      +++.+.+....+      ...+...++++.|+++++   .+++++++||++|+..+++...      . ..+++|++...
T Consensus         3 ~~~~~~~~~~~~------~~~~~~~~~~~~la~~~~---~~~~~~~~sgt~al~~~l~~l~------~-~~gd~vl~~~~   66 (352)
T cd00616           3 EAVEEVLDSGWL------TLGPKVREFEKAFAEYLG---VKYAVAVSSGTAALHLALRALG------I-GPGDEVIVPSF   66 (352)
T ss_pred             HHHHHHHHcCCc------cCCHHHHHHHHHHHHHhC---CCeEEEECCHHHHHHHHHHHcC------C-CCCCEEEeCCc
Confidence            455555554322      133567899999999984   4679999999999999998762      1 23468999999


Q ss_pred             CCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcccc
Q 010250          203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI  281 (514)
Q Consensus       203 ~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~  281 (514)
                      +||+........ |...            ..++... .+             ..+++++++.+.    +++++|++..+ 
T Consensus        67 ~~~~~~~~~~~~-g~~~------------~~~~~~~~~~-------------~~d~~~l~~~i~----~~~~~v~~~~~-  115 (352)
T cd00616          67 TFVATANAILLL-GATP------------VFVDIDPDTY-------------NIDPELIEAAIT----PRTKAIIPVHL-  115 (352)
T ss_pred             chHHHHHHHHHc-CCeE------------EEEecCCCcC-------------CcCHHHHHHhcC----cCCeEEEEECC-
Confidence            988754322211 1111            0011110 00             112466666653    34666666543 


Q ss_pred             CCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh----hhhcCCcccceeEEeC-H
Q 010250          282 GAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAILVS-P  356 (514)
Q Consensus       282 ~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s----K~l~gG~~pig~v~~~-~  356 (514)
                        .|...+    +++|+++|++||+++|+|++|+ +|...   .....+...|+.++|    |.+++|  +.|+++.+ +
T Consensus       116 --~G~~~~----~~~i~~l~~~~~i~li~D~a~~-~g~~~---~~~~~~~~~d~~~~S~~~~K~~~~~--~gg~~~~~~~  183 (352)
T cd00616         116 --YGNPAD----MDAIMAIAKRHGLPVIEDAAQA-LGATY---KGRKVGTFGDAGAFSFHPTKNLTTG--EGGAVVTNDE  183 (352)
T ss_pred             --CCCcCC----HHHHHHHHHHcCCeEEEECCCC-CCCeE---CCEEcccCcceeEEcCCCCCCCccc--CceEEEECCH
Confidence              465555    8999999999999999999998 44321   111223334666655    999653  45667665 5


Q ss_pred             HHHHHhhhccCCC--------CcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEE-
Q 010250          357 EVSEVIHSQSNTL--------GSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI-  427 (514)
Q Consensus       357 ~i~~~l~~~~~~~--------~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-  427 (514)
                      ++.+.+.......        .....+.++..+++.++.++..++.+  +++.++.+++.+++++.|+++.+..+.... 
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~  261 (352)
T cd00616         184 ELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKL--DEIIARRREIAERYKELLADLPGIRLPDVPP  261 (352)
T ss_pred             HHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhcCCCCccCCCCCC
Confidence            7766554311000        00112334556778787777766654  346778888999999999876333322211 


Q ss_pred             --EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----------------------------CCEEE
Q 010250          428 --RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------------------------GDNIM  477 (514)
Q Consensus       428 --~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------------------g~~iR  477 (514)
                        .....++.+.+.+... .        ....+.+.|.++||.+...                            .+.||
T Consensus       262 ~~~~~~~~~~~~~~~~~~-~--------~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~  332 (352)
T cd00616         262 GVKHSYHLYVIRLDPEAG-E--------SRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLS  332 (352)
T ss_pred             CCceeeEEEEEEECCcCC-C--------CHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEE
Confidence              1233456666543100 0        1456888999999976511                            03699


Q ss_pred             EeCCCCCCHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYG  497 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~  497 (514)
                      +.+....|++||+.++++|+
T Consensus       333 l~~~~~~t~~di~~i~~~l~  352 (352)
T cd00616         333 LPLHPSLTEEEIDRVIEALR  352 (352)
T ss_pred             ccCCCCCCHHHHHHHHHHhC
Confidence            99999999999999998874

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>PTZ00376 aspartate aminotransferase; Provisional

Probab=99.73  E-value=4.3e-16  Score=161.80  Aligned_cols=341  Identities=12%  Similarity=0.084  Sum_probs=191.6

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcCc-----CCCCeEEE--eCC
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTA-----SKMAKVFF--TNS  170 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~~-----~~~~~v~~--~~s  170 (514)
                      ++..+|+..|.... +. .++.+.+++.+++..... .......+.....+|.+.+++++..     ...++|++  +++
T Consensus        28 ~~~~i~l~~g~~~~-~~-~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G  105 (404)
T PTZ00376         28 SPSKVNLGIGAYRD-EN-GKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALS  105 (404)
T ss_pred             CcccEecccceeEC-CC-CCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccC
Confidence            34668887773211 22 223344555554422110 0000011223334555666655421     24567874  889


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC-C-CcccCCCCCCC
Q 010250          171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC-P-HYWRYAHPGET  248 (514)
Q Consensus       171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~  248 (514)
                      |++|...++.+...+    . ..++.|++.+++|++........+....             .++. + +.|        
T Consensus       106 ~~~al~~~~~~l~~~----~-~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~-------------~v~l~~~~~~--------  159 (404)
T PTZ00376        106 GTGALRLGFEFLKRF----L-PAGTTVYVSNPTWPNHVNIFKSAGLNVK-------------EYRYYDPKTK--------  159 (404)
T ss_pred             cchHHHHHHHHHHHh----c-CCCCEEEEcCCCchhHHHHHHHcCCcee-------------eccccCcccC--------
Confidence            999999888755332    1 2347899999999987543333222211             0111 0 001        


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc---cce
Q 010250          249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT---MFG  325 (514)
Q Consensus       249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~---~~~  325 (514)
                           ..+.+.+++.+.+..+. ..++++...+|.+|.+ .+++.+++|.++|++||+++|.||+|.+|...+.   ...
T Consensus       160 -----~~d~~~l~~~~~~~~~~-~~~~~~~~p~NPTG~~-~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~  232 (404)
T PTZ00376        160 -----GLDFDGMLEDLRTAPNG-SVVLLHACAHNPTGVD-PTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYA  232 (404)
T ss_pred             -----CcCHHHHHHHHHhCCCC-CEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHH
Confidence                 01246777776543222 3455545455666654 4678999999999999999999999998744321   001


Q ss_pred             ecc-cCCCCchh---chhhhhc-CCcccceeE---EeCHHHHHHhhhccCCCCcccccCCCC-CcHHHHHHHHHHHHHHh
Q 010250          326 CDK-YSIKPDLV---SFAKALS-SAYMPIGAI---LVSPEVSEVIHSQSNTLGSFSHGFTYS-GHPVSCAVAIEALKIYK  396 (514)
Q Consensus       326 ~~~-~gv~pDiv---~~sK~l~-gG~~pig~v---~~~~~i~~~l~~~~~~~~~~~~~~t~~-~~pl~~aaa~aal~~~~  396 (514)
                      ... ....+.++   +|||.++ .| +++|++   ++++++++.+...-   .. ...++++ .+++++.++.++|+.-.
T Consensus       233 ~~~~~~~~~~vi~i~SfSK~~~~~G-lRvG~~~~~~~~~~~~~~l~~~~---~~-~~~~~~~~~~~~~q~~~~~~l~~~~  307 (404)
T PTZ00376        233 IRLFAERGVEFLVAQSFSKNMGLYG-ERIGALHIVCANKEEAANVLSQL---KL-IIRPMYSSPPIHGARIADRILSDPE  307 (404)
T ss_pred             HHHHHhcCCcEEEEEeCCCcccccc-cccceEEEEeCCHHHHHHHHHHH---HH-HHhhhcCCCchHHHHHHHHHhCCHH
Confidence            111 11112333   6899888 45 999998   56877655442110   00 1122333 35677777777774211


Q ss_pred             ---h-----ccHHHHHHHHHHHHHhhhhhccCCC-ceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-
Q 010250          397 ---E-----RNIVEQVNKIAPKFQDGVKAFSDSP-IIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-  465 (514)
Q Consensus       397 ---~-----~~~~~~~~~~~~~l~~~L~~l~~~~-~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-  465 (514)
                         +     ++..++++++.+.+.+.|+++ ..+ ........ |.++++.+.                ..++++|.++ 
T Consensus       308 ~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~~~p~gg~f~~~~~~----------------~~~~~~L~~~~  370 (404)
T PTZ00376        308 LRAEWLSELKEMSGRIQNMRQLLYDELKAL-GSPGDWEHIINQIGMFSFTGLT----------------KEQVERLIEKY  370 (404)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCcccccccCceEEEecCCC----------------HHHHHHHHHhC
Confidence               0     123456677788888888775 212 11112233 444455432                2366777766 


Q ss_pred             CcEEEeeCCEEEEeCCCC-CCHHHHHHHHHHHHHHHH
Q 010250          466 GMLVRVSGDNIMMSPPFI-MSPEEVDELISKYGKALK  501 (514)
Q Consensus       466 Gv~~~~~g~~iRi~p~~~-~t~e~id~~~~~l~~~l~  501 (514)
                      ||.+.|++   |++  +. .+++++++++++|++++.
T Consensus       371 ~v~v~p~~---Ris--~~~~~~~~~~~~~~~l~~~~~  402 (404)
T PTZ00376        371 HIYLLDNG---RIS--VAGLTSKNVDYVAEAIHDVVR  402 (404)
T ss_pred             CEeecCCC---eEE--EeccCHHhHHHHHHHHHHHHh
Confidence            99988875   888  43 899999999999998874

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=99.73  E-value=2.4e-16  Score=154.69  Aligned_cols=277  Identities=16%  Similarity=0.175  Sum_probs=170.4

Q ss_pred             CHHHHHHHHHHHhcC--CccccccccCCchHHHHHHHHHHhcCc--CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCC
Q 010250          118 EPRLVAAATAQLNTL--PFYHSFWNRTTKPSLDLAKELLEMFTA--SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPN  193 (514)
Q Consensus       118 ~p~v~~A~~~~l~~~--~~~~~~~~~~~~~~~ela~~L~~~~~~--~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~  193 (514)
                      +..|.+++++.+...  ..|++.++ ...+...|++.+.++++.  ...++|+.++++.+|+..++....        ..
T Consensus        46 P~fv~ea~~~~~~~~~~~qYt~~~G-~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~--------~~  116 (420)
T KOG0257|consen   46 PKFVTEAAKNAAKEPSTNQYTRGYG-LPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLL--------NP  116 (420)
T ss_pred             cHHHHHHHHHHhccchhccccccCC-chHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHHHHc--------CC
Confidence            345778888887663  12333333 445566777777775532  245789999999999998887664        45


Q ss_pred             ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEE
Q 010250          194 KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIA  273 (514)
Q Consensus       194 ~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~a  273 (514)
                      .+.||++++.|..+.......++.+.+...- +....   . ....|             ..|.++||..+.   .++.+
T Consensus       117 GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~-~~~g~---~-~s~~~-------------~~D~~~le~~~t---~kTk~  175 (420)
T KOG0257|consen  117 GDEVIVFEPFFDCYIPQVVMAGGTPVFVPLK-PKEGN---V-SSSDW-------------TLDPEELESKIT---EKTKA  175 (420)
T ss_pred             CCEEEEecCcchhhhhHHhhcCCcceeeccc-ccccc---c-cCccc-------------cCChHHHHhhcc---CCccE
Confidence            6899999999999887777777776543211 00000   0 01111             122577777775   23444


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc---cceecccCC---CCchhchhhhhcCCcc
Q 010250          274 AFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT---MFGCDKYSI---KPDLVSFAKALSSAYM  347 (514)
Q Consensus       274 avivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~---~~~~~~~gv---~pDiv~~sK~l~gG~~  347 (514)
                      .|++.|. +..|.+. +++.|++|.+||++||+++|+||||.-+-..|.   +++.. .|+   .-.+-++||.++--+|
T Consensus       176 Ii~ntPh-NPtGkvf-sReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~asl-Pgm~ertitvgS~gKtf~~TGW  252 (420)
T KOG0257|consen  176 IILNTPH-NPTGKVF-SREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASL-PGMYERTITVGSFGKTFGVTGW  252 (420)
T ss_pred             EEEeCCC-CCcCccc-CHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecC-CchhheEEEeccccceeeeeee
Confidence            5555555 4555544 679999999999999999999999986655553   22322 222   2233468895554229


Q ss_pred             cceeEEeCHHHHHHhhhccCCCCcccccCCCCCc-H--HHHHHHHHHHHH-Hh-------hccHHHHHHHHHHHHHhhhh
Q 010250          348 PIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH-P--VSCAVAIEALKI-YK-------ERNIVEQVNKIAPKFQDGVK  416 (514)
Q Consensus       348 pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~-p--l~~aaa~aal~~-~~-------~~~~~~~~~~~~~~l~~~L~  416 (514)
                      ++|++++++.++......       ..-..+..+ |  .+++++.+ ++. +.       ..++...++++++.|.+.|.
T Consensus       253 rlGW~igp~~L~~~~~~v-------h~~~~~~~~Tp~q~A~a~a~~-~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~  324 (420)
T KOG0257|consen  253 RLGWAIGPKHLYSALFPV-------HQNFVFTCPTPIQEASAAAFA-LELACLQPGGSYFITELVKEYKEKRDILAKALE  324 (420)
T ss_pred             eeeeeechHHhhhhHHHH-------hhccccccCcHHHHHHHHHHh-hhhhccCCcchhHHHHHHHHHHHHHHHHHHHHH
Confidence            999999988887776532       111233222 2  22333322 122 11       12367788899999999999


Q ss_pred             hccCCCceeEEEeee-eeEEEEEc
Q 010250          417 AFSDSPIIGEIRGTG-LILGTEFA  439 (514)
Q Consensus       417 ~l~~~~~~~~v~g~g-~~~~i~~~  439 (514)
                      ++ +.+..   -+.| .++..+|.
T Consensus       325 ~l-g~~v~---~p~gayyl~adfs  344 (420)
T KOG0257|consen  325 EL-GLKVT---GPEGAYYLWADFS  344 (420)
T ss_pred             hc-CCccc---cCCCceEEEEecc
Confidence            88 33322   2334 35566776

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.73  E-value=4.6e-15  Score=154.78  Aligned_cols=332  Identities=15%  Similarity=0.139  Sum_probs=185.4

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHh-cCCcc---ccccccCCchHHHHHH----HHHHhcCcCCCCeEEEeCCh
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLN-TLPFY---HSFWNRTTKPSLDLAK----ELLEMFTASKMAKVFFTNSG  171 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~-~~~~~---~~~~~~~~~~~~ela~----~L~~~~~~~~~~~v~~~~sG  171 (514)
                      +.+|++.++-.   .  -+|+|++|+.+.+. ..+..   +..+.+ .+...++++    .++++++. ....+ +.+||
T Consensus        25 ~~~~~l~~~~n---~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~~~~~~la~~~g~-~~~~i-~~~sg   96 (416)
T PRK00011         25 EEHIELIASEN---F--VSPAVMEAQGSVLTNKYAEGYPGKRYYGG-CEYVDVVEQLAIDRAKELFGA-EYANV-QPHSG   96 (416)
T ss_pred             hcCeeeecccC---c--CCHHHHHHHhchhhcccccCCCCcccccc-chHHHHHHHHHHHHHHHHhCC-Cceee-ecCCc
Confidence            56788777632   2  48999999877653 22111   111111 122333433    66777643 33334 44679


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccccee--eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCCh
Q 010250          172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI--AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE  249 (514)
Q Consensus       172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~--~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (514)
                      ++|+..++....        .++++|++....|.+....  .....+..     ..     +..++...           
T Consensus        97 t~al~~~l~~l~--------~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g-----~~-----~~~~~~~~-----------  147 (416)
T PRK00011         97 SQANAAVYFALL--------KPGDTILGMDLAHGGHLTHGSPVNFSGKL-----YN-----VVSYGVDE-----------  147 (416)
T ss_pred             hHHHHHHHHHhc--------CCCCEEEEeccccCCccccccccccccce-----ee-----EeecCcCc-----------
Confidence            999998887663        2346788888887653211  11111100     00     00011100           


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCcEEEEEE-ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecc
Q 010250          250 EEYSTRLANNLEDLILKEGPETIAAFIA-EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK  328 (514)
Q Consensus       250 ~~~~~~~~~~le~li~~~~~~~~aaviv-Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~  328 (514)
                       +....+++++++++.+.   ++.+|++ .+++   |...+    +++|.++|++||+++|+||+|. +|..+.......
T Consensus       148 -~~~~~d~~~l~~~i~~~---~~k~v~~~~~~~---~~~~~----~~~I~~la~~~~~~livD~a~~-~g~~~~g~~~~~  215 (416)
T PRK00011        148 -ETGLIDYDEVEKLALEH---KPKLIIAGASAY---SRPID----FKRFREIADEVGAYLMVDMAHI-AGLVAAGVHPSP  215 (416)
T ss_pred             -ccCCcCHHHHHHHHHhc---CCCEEEECCCcC---CCccC----HHHHHHHHHHcCCEEEEECcch-hcccccCccCCC
Confidence             00112357888877532   3344555 4433   43444    8999999999999999999986 333321100111


Q ss_pred             cCCCCchh--chhhhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCC-CcHHHHHHHH-HHHHHHhh--ccHH
Q 010250          329 YSIKPDLV--SFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYS-GHPVSCAVAI-EALKIYKE--RNIV  401 (514)
Q Consensus       329 ~gv~pDiv--~~sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~-~~pl~~aaa~-aal~~~~~--~~~~  401 (514)
                      .+ ..|++  +++|+++|  .+.|+++++ +++.+.+....      .. ++++ .....+++.. +.++.+++  ++..
T Consensus       216 ~~-~~di~~~S~~K~l~g--~~gg~i~~~~~~~~~~l~~~~------~~-~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~  285 (416)
T PRK00011        216 VP-HADVVTTTTHKTLRG--PRGGLILTNDEELAKKINSAV------FP-GIQGGPLMHVIAAKAVAFKEALEPEFKEYA  285 (416)
T ss_pred             CC-CCcEEEecCCcCCCC--CCceEEEeCCHHHHHHHHHHh------Cc-cccCCccHHHHHHHHHHHHHHHhhhHHHHH
Confidence            12 34665  56799965  678899985 68888876421      11 1121 1222333333 33343332  3467


Q ss_pred             HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------
Q 010250          402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---------  472 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------  472 (514)
                      ++++++++++++.|+++ ...+.. -...+.++.+.+.+...          ....+.+.|.++||.+...         
T Consensus       286 ~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~i~~~~~~~----------~~~~~~~~L~~~GI~v~~~~~p~~~~~~  353 (416)
T PRK00011        286 QQVVKNAKALAEALAER-GFRVVS-GGTDNHLVLVDLRSKGL----------TGKEAEAALEEANITVNKNAVPFDPRSP  353 (416)
T ss_pred             HHHHHHHHHHHHHHHhC-CCeeee-cCCCCeEEEEeCcccCC----------CHHHHHHHHHHcCcEEccCcCCCCCCCC
Confidence            88899999999999875 222211 00123555666542210          1345778888999998721         


Q ss_pred             --CCEEEEeCC----CCCCHHHHHHHHHHHHHHHHH
Q 010250          473 --GDNIMMSPP----FIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       473 --g~~iRi~p~----~~~t~e~id~~~~~l~~~l~~  502 (514)
                        ...+|+...    ..+|++|++++++.|++++..
T Consensus       354 ~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~  389 (416)
T PRK00011        354 FVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN  389 (416)
T ss_pred             CCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence              235898542    257899999999999988765

>PRK07908 hypothetical protein; Provisional

Probab=99.73  E-value=2.2e-15  Score=153.41  Aligned_cols=312  Identities=14%  Similarity=0.172  Sum_probs=189.4

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ  178 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A  178 (514)
                      +..++||..|.  +.++ .++.+++++.+.+.....|.     ......++.+.++++++ .+.+++++++++++|+..+
T Consensus        21 ~~~~~~l~~~~--~~~~-~~~~~~~~~~~~~~~~~~Y~-----~~~g~~~lr~aia~~~~-~~~~~I~it~Ga~~al~~~   91 (349)
T PRK07908         21 GPGLLDFAVNV--RHDT-PPEWLRERLAARLGDLAAYP-----STEDERRARAAVAARHG-RTPDEVLLLAGAAEGFALL   91 (349)
T ss_pred             CCCeEEecCCC--CCCC-CCHHHHHHHHHHhhHhhcCC-----CccchHHHHHHHHHHhC-cChhhEEECCCHHHHHHHH
Confidence            67899998763  3344 57889999998876532221     12234677788888774 4568999999999999887


Q ss_pred             HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250          179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN  258 (514)
Q Consensus       179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (514)
                      ++ ..        +  .++++..++|.+..... ...|....            .++....|.                -
T Consensus        92 ~~-l~--------~--~~viv~~P~y~~~~~~~-~~~G~~i~------------~v~~~~~~~----------------~  131 (349)
T PRK07908         92 AR-LR--------P--RRAAVVHPSFTEPEAAL-RAAGIPVH------------RVVLDPPFR----------------L  131 (349)
T ss_pred             Hh-cC--------C--CeEEEeCCCChHHHHHH-HHcCCEEE------------eeccCcccC----------------c
Confidence            76 21        2  46777888887653221 11221111            011110011                0


Q ss_pred             HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh--
Q 010250          259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--  336 (514)
Q Consensus       259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--  336 (514)
                      +++. +.    +++.++++-..++.+|.+.+    .++|.++|++ ++++|+||+|..| ..|.......... ++++  
T Consensus       132 d~~~-l~----~~~~~i~l~np~NPTG~~~~----~~~l~~l~~~-~~~iIvDe~y~~~-~~~~~~~l~~~~~-~~~i~i  199 (349)
T PRK07908        132 DPAA-VP----DDADLVVIGNPTNPTSVLHP----AEQLLALRRP-GRILVVDEAFADA-VPGEPESLAGDDL-PGVLVL  199 (349)
T ss_pred             ChhH-hc----cCCCEEEEcCCCCCCCCCcC----HHHHHHHHhc-CCEEEEECcchhh-ccCCccccccccC-CCEEEE
Confidence            1111 11    22345555334566777776    4678888865 7889999999866 2233211111111 3433  


Q ss_pred             -chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH--Hh-hccHHHHHHHHHHHH
Q 010250          337 -SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI--YK-ERNIVEQVNKIAPKF  411 (514)
Q Consensus       337 -~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~--~~-~~~~~~~~~~~~~~l  411 (514)
                       +|||.++ .| +++|++++++++++.+....         ..+..+++..+++.+.++-  .+ -+++.++++++.+++
T Consensus       200 ~S~SK~~~l~G-lRiG~~~~~~~~~~~~~~~~---------~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l  269 (349)
T PRK07908        200 RSLTKTWSLAG-LRVGYALGAPDVLARLTRGR---------AHWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEM  269 (349)
T ss_pred             eecccccCCcc-ceeeeeecCHHHHHHHHhcC---------CCCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHH
Confidence             6799887 45 89999999999998887421         1233445555544443330  00 123466677777777


Q ss_pred             HhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------CCEEEEeCCCCC
Q 010250          412 QDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMSPPFIM  484 (514)
Q Consensus       412 ~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g~~iRi~p~~~~  484 (514)
                      .+.|+++ ...+  .....|.++++.+.+              ...+...|.++||.+.++       .+.||++.   .
T Consensus       270 ~~~L~~~-~~~~--~~p~~g~~~~~~~~~--------------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~---~  329 (349)
T PRK07908        270 VAGLRAV-GARV--VDPAAAPFVLVRVPD--------------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV---R  329 (349)
T ss_pred             HHHHHhC-CcEe--ccCCCceEEEEECCc--------------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe---C
Confidence            7777764 2111  111347777777642              234778888999999864       25799993   5


Q ss_pred             CHHHHHHHHHHHHHHHH
Q 010250          485 SPEEVDELISKYGKALK  501 (514)
Q Consensus       485 t~e~id~~~~~l~~~l~  501 (514)
                      ++++++++++.|++.+.
T Consensus       330 ~~~~~~~l~~al~~~~~  346 (349)
T PRK07908        330 PRAEVPVLVQALAEILK  346 (349)
T ss_pred             CCccHHHHHHHHHHHHh
Confidence            88899999999987653

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=99.72  E-value=1.8e-15  Score=157.16  Aligned_cols=342  Identities=11%  Similarity=0.032  Sum_probs=192.6

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccccc-ccCCchHHHHHHHHHHhc--CcCCCCeEEEeCChhHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFW-NRTTKPSLDLAKELLEMF--TASKMAKVFFTNSGSEAN  175 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~~~ela~~L~~~~--~~~~~~~v~~~~sGseA~  175 (514)
                      |..++|+..|.  ..++ ..|.+.+++.+.+.+........ ..+.....+|.+.+++.+  .....+++++++|+++++
T Consensus        32 ~~~~i~l~~~~--~~~~-~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~~~~d~I~it~Ga~~al  108 (402)
T TIGR03542        32 SADIIRLGIGD--TTQP-LPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGRIDPEEIFISDGAKCDV  108 (402)
T ss_pred             CCCeEEcCCCC--CCCC-CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcCCCHHHEEECCCcHHHH
Confidence            67789987763  2343 47888999988876532110000 112233455666666643  124568999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      .....+.         ..+++|++.+++|.+........+. +......+. ...+..+++...          +.+   
T Consensus       109 ~~l~~l~---------~~gd~Vlv~~P~y~~~~~~~~~~g~-~~~~~~~~~-~~~~~~v~~~~~----------~~~---  164 (402)
T TIGR03542       109 FRLQSLF---------GSDNTVAVQDPVYPAYVDSNVMAGR-AGVLDDDGR-YSKITYLPCTKE----------NNF---  164 (402)
T ss_pred             HHHHHhc---------CCCCEEEEeCCCCcchHHHHHHcCC-ccccccccc-cceEEEeecchh----------hCC---
Confidence            8753322         2346799999999887543332221 100000000 000111111000          000   


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-cee-cccCCCC
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGC-DKYSIKP  333 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~-~~~gv~p  333 (514)
                       ..+++.     . .++.+|++...++.+|.+ .+.+.+++|.++|++||+++|.||+|..|-..+.. ... ...+...
T Consensus       165 -~~~~~~-----~-~~~~~i~l~nP~NPTG~~-~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~  236 (402)
T TIGR03542       165 -IPDLPE-----E-PKIDIIYLCSPNNPTGTV-LTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKE  236 (402)
T ss_pred             -CCCccc-----c-CCceEEEEeCCCCCCCcc-CCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcc
Confidence             001111     1 233444443445666654 46788999999999999999999999987433211 111 1111111


Q ss_pred             c---hhchhhhhcCCcccceeEEeCHHHH--------HHhhhccCCCCcccccCCC-CCcHHHHHHHHHHHHH--Hh-hc
Q 010250          334 D---LVSFAKALSSAYMPIGAILVSPEVS--------EVIHSQSNTLGSFSHGFTY-SGHPVSCAVAIEALKI--YK-ER  398 (514)
Q Consensus       334 D---iv~~sK~l~gG~~pig~v~~~~~i~--------~~l~~~~~~~~~~~~~~t~-~~~pl~~aaa~aal~~--~~-~~  398 (514)
                      .   +-+|||.++..++++|+++++++++        ..+..        ....++ +.+.+++.++.+.++.  .. -.
T Consensus       237 ~vi~~~SfSK~~g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~--------~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~  308 (402)
T TIGR03542       237 CAIEFRSFSKTAGFTGVRLGWTVVPKELTYADGHSVIQDWER--------RQCTKFNGASYPVQRAAEAAYAGEGLQPIL  308 (402)
T ss_pred             cEEEEecCccccCCCCcceEEEEecHHHhhcchhhHHHHHHH--------HhhhcccCCCHHHHHHHHHHHcCcchhHHH
Confidence            2   2378998874339999999998876        22211        011122 3566777666665542  11 11


Q ss_pred             cHHHHHHHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee----
Q 010250          399 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS----  472 (514)
Q Consensus       399 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~----  472 (514)
                      +..+.++++.+.+.+.|++.   + +....+ .|.++++.+.+...           ...+...|+ +.||.+.++    
T Consensus       309 ~~~~~~~~~~~~~~~~L~~~---~-~~~~~~~~~~f~~v~l~~~~~-----------~~~l~~~l~~~~gv~v~pg~~f~  373 (402)
T TIGR03542       309 EAISYYMENARILRKALEAA---G-FKVYGGEHAPYLWVKTPEGIS-----------SWDFFDFLLYQYHVVGTPGSGFG  373 (402)
T ss_pred             HHHHHHHHHHHHHHHHHHhc---C-ceecCCCceeEEEEECCCCCC-----------HHHHHHHHHHhCCEEEeCchhhC
Confidence            23455666667777777664   2 111233 35677888753210           234667766 579999874    


Q ss_pred             ---CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          473 ---GDNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       473 ---g~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                         .+++||+  +..+++++++++++|.++|
T Consensus       374 ~~~~~~iRis--~~~~~~~l~~~l~~l~~~~  402 (402)
T TIGR03542       374 PSGEGFVRFS--AFGKRENIVEACERIKEAL  402 (402)
T ss_pred             CCCCCEEEEE--ecCCHHHHHHHHHHHHhhC
Confidence               2469999  5668999999999998753

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=99.72  E-value=3.2e-15  Score=157.59  Aligned_cols=308  Identities=15%  Similarity=0.132  Sum_probs=179.7

Q ss_pred             chHHHHHHHHHHhcC---cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccc
Q 010250          144 KPSLDLAKELLEMFT---ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL  220 (514)
Q Consensus       144 ~~~~ela~~L~~~~~---~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~  220 (514)
                      +....+++.+.+.++   ....++|++++|++++++.++....        ..++.|++.+++|.+.........|... 
T Consensus        90 ~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~--------~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~-  160 (468)
T PLN02450         90 AFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLA--------EPGDAFLLPTPYYPGFDRDLKWRTGVEI-  160 (468)
T ss_pred             HHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhC--------CCCCEEEECCCCCCchHHHHhhcCCcEE-
Confidence            344445555544322   1356789999999999998887653        3457899999999876432221122111 


Q ss_pred             cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEE-EEEEccccCCCCcccCChhHHHHH
Q 010250          221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIA-AFIAEPVIGAGGVIPPPATYFEKV  297 (514)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~a-avivEpv~~~~G~~~p~~~~L~~l  297 (514)
                                 ..+++...          +.+. .+.+++++.+.+.  ...++. .+++.|. +.+|.+ .+++.+++|
T Consensus       161 -----------v~v~~~~~----------~~~~-~~~~~le~~~~~~~~~~~~~k~v~l~nP~-NPTG~~-~s~e~l~~l  216 (468)
T PLN02450        161 -----------VPIHCSSS----------NGFQ-ITESALEEAYQQAQKLNLKVKGVLITNPS-NPLGTT-TTRTELNLL  216 (468)
T ss_pred             -----------EEEecCCc----------cCCc-CCHHHHHHHHHHHHhcCCCeeEEEEecCC-CCCCcc-cCHHHHHHH
Confidence                       11111000          0010 0135666665432  112344 5555565 455544 467899999


Q ss_pred             HHHHHhcCCEEEEechhcCcccccccce--eccc------CC-CCc-hh---chhhhhc-CCcccceeEEeCHH-HHHHh
Q 010250          298 QAVVKKYDILFIADEVICAFGRLGTMFG--CDKY------SI-KPD-LV---SFAKALS-SAYMPIGAILVSPE-VSEVI  362 (514)
Q Consensus       298 ~~l~~~~gillI~DEv~tG~gr~G~~~~--~~~~------gv-~pD-iv---~~sK~l~-gG~~pig~v~~~~~-i~~~l  362 (514)
                      .++|++||+++|+||+|.++-..+..+.  ....      +. .++ ++   +|||.++ .| +++|+++++++ +++.+
T Consensus       217 l~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~G-lRiG~li~~~~~l~~~~  295 (468)
T PLN02450        217 VDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPG-FRVGAIYSNDEMVVSAA  295 (468)
T ss_pred             HHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCC-ccEEEEEECCHHHHHHH
Confidence            9999999999999999997644442221  1111      11 122 22   6899887 45 89999999754 55655


Q ss_pred             hhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--h---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEE
Q 010250          363 HSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--E---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTE  437 (514)
Q Consensus       363 ~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~  437 (514)
                      ...       .  .....+.+++.++.++|+.-.  +   ++..++++++.+.+.+.|+++ ..++.  ...-|+++++.
T Consensus       296 ~~~-------~--~~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~--~~~~g~flwi~  363 (468)
T PLN02450        296 TKM-------S--SFGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCL--KSNAGLFCWVD  363 (468)
T ss_pred             HHH-------h--hcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc--CCCceEEEEEE
Confidence            421       1  112245667777766664210  0   123556666677777777665 22221  12346688888


Q ss_pred             EccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeC-------CEEEEeCCCC-CCHHHHHHHHHHHHHHHHHHH
Q 010250          438 FADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-------DNIMMSPPFI-MSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       438 ~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g-------~~iRi~p~~~-~t~e~id~~~~~l~~~l~~~~  504 (514)
                      +.......     .......+...++ +.||.+.|+.       +++|++  +. .+++++++++++|++++.+..
T Consensus       364 l~~~~~~~-----~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~--f~~~~~~~l~~~l~ri~~~l~~~~  432 (468)
T PLN02450        364 MRHLLKSN-----TFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVC--FANMSEETLDLAMKRLKSFVESDS  432 (468)
T ss_pred             chHhcCcC-----CchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEE--ecCCCHHHHHHHHHHHHHHHHhcc
Confidence            75321110     0111223555555 5799998752       479999  66 489999999999999998766

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.72  E-value=4.2e-15  Score=154.44  Aligned_cols=333  Identities=18%  Similarity=0.161  Sum_probs=185.8

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHh-cCCc---cccccccCC--chHHHH-HHHHHHhcCcCCCCeEEEeCChh
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLN-TLPF---YHSFWNRTT--KPSLDL-AKELLEMFTASKMAKVFFTNSGS  172 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~-~~~~---~~~~~~~~~--~~~~el-a~~L~~~~~~~~~~~v~~~~sGs  172 (514)
                      +++|++..+-  ++   -+|+|++|+.+.+. +...   .+..+.+..  +...++ ++.++++++. +... ++.+||+
T Consensus        19 ~~~~~~~~~~--~~---~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~-~~~~-v~~~sgt   91 (402)
T cd00378          19 RETLELIASE--NF---TSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGA-EYAN-VQPHSGS   91 (402)
T ss_pred             HhCeeeeccC--Cc---CCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCC-Ccee-eecCCcH
Confidence            5677776553  22   38999999987652 3211   112221111  122332 2345566642 2233 4445799


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee----eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCC
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA----ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET  248 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~----~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (514)
                      +|+..++....        ..+++|++.++.|.+.....    +...|..            +..++.+...        
T Consensus        92 ~a~~~~l~~l~--------~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~------------~~~~~~~~~~--------  143 (402)
T cd00378          92 QANLAVYFALL--------EPGDTIMGLDLSHGGHLTHGSFTKVSASGKL------------FESVPYGVDP--------  143 (402)
T ss_pred             HHHHHHHHHhc--------CCCCEEEEecCccCcccccccccccccccee------------EEEecCCcCc--------
Confidence            99999988764        23468999888886542211    1111110            0001111000        


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechh-cCcccccccceec
Q 010250          249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI-CAFGRLGTMFGCD  327 (514)
Q Consensus       249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~-tG~gr~G~~~~~~  327 (514)
                       + ....+++++++.+...  +...++++.|.+   |...+    +++|.++|++||+++|+||+| .|+...|.. .. 
T Consensus       144 -~-~~~id~~~l~~~i~~~--~~~~v~~~~~~~---~~~~~----~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~-~~-  210 (402)
T cd00378         144 -E-TGLIDYDALEKMALEF--KPKLIVAGASAY---PRPID----FKRFREIADEVGAYLLVDMAHVAGLVAGGVF-PN-  210 (402)
T ss_pred             -c-cCCcCHHHHHHHHHhC--CCCEEEecCccc---CCCcC----HHHHHHHHHhcCCEEEEEccchhhhhhcccC-CC-
Confidence             0 0011257777777532  223344446644   33334    899999999999999999997 344222211 11 


Q ss_pred             ccCCCCchh--chhhhhcCCcccceeEEeCH-HHHHHhhhccCCCCcccccCCCCC-cHHHHHHHHHHHHHHhh---ccH
Q 010250          328 KYSIKPDLV--SFAKALSSAYMPIGAILVSP-EVSEVIHSQSNTLGSFSHGFTYSG-HPVSCAVAIEALKIYKE---RNI  400 (514)
Q Consensus       328 ~~gv~pDiv--~~sK~l~gG~~pig~v~~~~-~i~~~l~~~~~~~~~~~~~~t~~~-~pl~~aaa~aal~~~~~---~~~  400 (514)
                      ... ..|++  +++|+++|  .+.|++++++ ++++.+....       ..+.++. ++...+++..++....+   ++.
T Consensus       211 ~~~-~~dv~~~s~sK~l~G--~~gg~i~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~  280 (402)
T cd00378         211 PLP-GADVVTTTTHKTLRG--PRGGLILTRKGELAKKINSAV-------FPGLQGGPHLHVIAAKAVALKEALEPEFKAY  280 (402)
T ss_pred             ccc-CCcEEEeccccCCCC--CCceEEEeccHHHHHHHHHHh-------CccccCCchHHHHHHHHHHHHHHhhHHHHHH
Confidence            111 34765  57799954  6889999876 8888875421       1111221 22233333333433322   346


Q ss_pred             HHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe---------
Q 010250          401 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV---------  471 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~---------  471 (514)
                      .+++.++.+++.+.|+++ ....... ...+.++++.+.+...          ....+.+.|.++||.+.+         
T Consensus       281 ~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~v~v~~~~~~~----------~~~~~~~~l~~~gI~v~~~~~p~~~~~  348 (402)
T cd00378         281 AKQVVENAKALAEALKER-GFKVVSG-GTDNHLVLVDLRPKGI----------TGKAAEDALEEAGITVNKNTLPWDPSS  348 (402)
T ss_pred             HHHHHHHHHHHHHHHHhC-CCeEeec-CCCCeEEEEeCCccCC----------CHHHHHHHHHHcCcEEcCCcCCCCCCC
Confidence            677888889999988875 3222211 1235666677653211          023466678889999962         


Q ss_pred             --eCCEEEEeCCCC----CCHHHHHHHHHHHHHHHHH
Q 010250          472 --SGDNIMMSPPFI----MSPEEVDELISKYGKALKA  502 (514)
Q Consensus       472 --~g~~iRi~p~~~----~t~e~id~~~~~l~~~l~~  502 (514)
                        ..+.+|+++...    ++++||+++++.|.+++.+
T Consensus       349 ~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~  385 (402)
T cd00378         349 PFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD  385 (402)
T ss_pred             CCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence              124699987653    4799999999999998754

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=99.71  E-value=5.8e-15  Score=142.62  Aligned_cols=346  Identities=16%  Similarity=0.121  Sum_probs=206.9

Q ss_pred             CEEEEccCCcccccCCC--CCHHHHHHHHHHHhcCCc--cccccccCCchHHHHHHHHHHhcCc-CCCCeEEEeCChhHH
Q 010250          100 KKYLDSLAGLWCTALGG--SEPRLVAAATAQLNTLPF--YHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEA  174 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh--~~p~v~~A~~~~l~~~~~--~~~~~~~~~~~~~ela~~L~~~~~~-~~~~~v~~~~sGseA  174 (514)
                      |.+|-+..|..+ .+|-  ..++..+|+.+++..+.+  |.+. -+........|+++....+. -..+.|++|++.++|
T Consensus        61 k~iipl~~GDPs-v~~~~~ts~~a~~Av~~al~Sgk~N~Yaps-~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qA  138 (447)
T KOG0259|consen   61 KPILPLGHGDPS-VYPCFRTSQEAEQAVVDALRSGKGNGYAPS-VGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQA  138 (447)
T ss_pred             ceeccCCCCCCC-ccccccCCHHHHHHHHHHHhcCCCCCcCCc-cccHHHHHHHHHHhhcCCCCccCcCceEEeccchHH
Confidence            466666555442 2332  467899999999976432  2111 12333445556665444422 245789999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      +|.++....        ..+..|+...++|.=+...+.. ++.....  |+.                 +|..+    -.
T Consensus       139 Ie~~i~~LA--------~p~aNILlPrPGfp~Y~~~a~~-~~lEVR~--ydl-----------------LPe~~----we  186 (447)
T KOG0259|consen  139 IELAISSLA--------NPGANILLPRPGFPLYDTRAIY-SGLEVRY--YDL-----------------LPEKD----WE  186 (447)
T ss_pred             HHHHHHHhc--------CCCCceecCCCCCchHHHhhhh-cCceeEe--ecc-----------------cCccc----ce
Confidence            999998653        3457899999999654322221 1111111  111                 11111    12


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccC-CC
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYS-IK  332 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~g-v~  332 (514)
                      .|++.+|.++.+   +++|.||++|.+..|++.  +.+-|++|.++|+|+|+++|+||||..+-..++.| ....+. +.
T Consensus       187 IDL~~veal~DE---NT~AivviNP~NPcGnVy--s~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiV  261 (447)
T KOG0259|consen  187 IDLDGVEALADE---NTVAIVVINPNNPCGNVY--SEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIV  261 (447)
T ss_pred             echHHHHHhhcc---CeeEEEEeCCCCCCcccc--cHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccC
Confidence            336778887753   678999999998888655  66889999999999999999999998664444443 222232 33


Q ss_pred             Cchh--chhhhhcCCcccceeEEeCHH--------HHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH--
Q 010250          333 PDLV--SFAKALSSAYMPIGAILVSPE--------VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI--  400 (514)
Q Consensus       333 pDiv--~~sK~l~gG~~pig~v~~~~~--------i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~--  400 (514)
                      |-|.  .+||..--.+|++|+++..+.        +++.+..        ...-+.+.+.+-++|.-.-|+... +++  
T Consensus       262 PVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~--------~~~~~~~p~TiiQ~AlP~IL~kTp-~efF~  332 (447)
T KOG0259|consen  262 PVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKN--------FLDIIPGPATIIQGALPDILEKTP-EEFFD  332 (447)
T ss_pred             ceEeecccccccccCCceeeeEEEecccccccchHHHHHHHH--------HHhccCCccHhHHHHhHHHHHhCh-HHHHH
Confidence            4332  256854444499999887431        2233332        111233333333333322222211 222  


Q ss_pred             --HHHHHHHHHHHHhhhhhccCCCcee-EEEeeeeeEEE-EEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEee---
Q 010250          401 --VEQVNKIAPKFQDGVKAFSDSPIIG-EIRGTGLILGT-EFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVS---  472 (514)
Q Consensus       401 --~~~~~~~~~~l~~~L~~l~~~~~~~-~v~g~g~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~---  472 (514)
                        ..-++.+.+...+.|+++   |.+. .++..|.|+-+ .+.-+     .++...+ ...|+.+| .|+.+++-|+   
T Consensus       333 k~~~~lk~na~l~y~~Lk~I---P~l~cp~kPeg~mylmv~l~~s-----~~~~~~d-D~dFc~kL~~Eesv~~LPG~af  403 (447)
T KOG0259|consen  333 KKLSFLKSNADLCYSRLKDI---PCLTCPVKPEGCMYLMVKLNLS-----LFPDIED-DVDFCQKLAREESVICLPGQAF  403 (447)
T ss_pred             HHHHHHHhhHHHHHHHHhcC---CCcccCcCCCcceEEEeccchh-----hhccccc-cHHHHHHHhhhcceEEeccccc
Confidence              455777777788888776   5444 56667765433 22111     1111111 12245544 5778888875   


Q ss_pred             --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          473 --GDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       473 --g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                        .+++|++  +....+.+++++++|++...+..
T Consensus       404 ~~~nw~Ri~--i~~~~~~leea~~Rik~Fc~RH~  435 (447)
T KOG0259|consen  404 GLKNWLRIV--ITVEEEMLEEAFSRIKEFCDRHS  435 (447)
T ss_pred             cCCCeEEEE--EccChHHHHHHHHHHHHHHHhhh
Confidence              3789999  88999999999999999987765

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=99.71  E-value=1.9e-15  Score=154.66  Aligned_cols=288  Identities=15%  Similarity=0.186  Sum_probs=176.2

Q ss_pred             HHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCC
Q 010250          146 SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD  225 (514)
Q Consensus       146 ~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~  225 (514)
                      ..+|.+.|+++++ ...++|++++|+++++..++....       .++++.|++.+++|......+.. .|...      
T Consensus        61 ~~~lr~~ia~~~~-~~~~~I~~t~G~~~~l~~~~~~~~-------~~g~~~vlv~~p~y~~~~~~~~~-~g~~~------  125 (364)
T PRK04781         61 PPGLRSALAALYG-CAPEQLLIGRGSDEAIDLLVRALC-------VPGRDAVLVTPPVFGMYAVCARL-QNAPL------  125 (364)
T ss_pred             HHHHHHHHHHHhC-cChHHEEEeCCHHHHHHHHHHHhc-------CCCCCeEEEcCCChHHHHHHHHH-cCCEE------
Confidence            4678888888874 456789999999999999887653       13335788878877543221111 11111      


Q ss_pred             CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC
Q 010250          226 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD  305 (514)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g  305 (514)
                            ..++..+.      .   +.+. .+.+++++...  . .++.+|++...++.+|.+.+ .+.++++.+.|+ ++
T Consensus       126 ------~~v~~~~~------~---~~~~-~d~~~l~~~~~--~-~~~~lv~l~~p~NPTG~~~~-~~~~~~l~~~~~-~~  184 (364)
T PRK04781        126 ------VEVPLVDG------A---DGFH-ADVPAIVAAAL--A-SNAKLVFLCSPSNPAGSAIA-LDQIERALQALQ-GK  184 (364)
T ss_pred             ------EEEecCCC------c---cCCC-cCHHHHHHHHh--c-cCCeEEEEcCCCCCCCCCcC-HHHHHHHHHhCC-CC
Confidence                  11111000      0   0000 01233332221  1 24455555556677787765 455666666664 48


Q ss_pred             CEEEEechhcCcccccccceecccCCCCchh---chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCc
Q 010250          306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLV---SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH  381 (514)
Q Consensus       306 illI~DEv~tG~gr~G~~~~~~~~gv~pDiv---~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~  381 (514)
                      +++|+||++..|......  ....+..+.++   +|||.++ .| +++|++++++++++.+...         ...++.+
T Consensus       185 ~~iI~Deay~~f~~~~~~--~~~~~~~~~vi~~~SfSK~~gl~G-lRvGy~v~~~~l~~~l~~~---------~~~~~~~  252 (364)
T PRK04781        185 ALVVVDEAYGEFSDVPSA--VGLLARYDNLAVLRTLSKAHALAA-ARIGSLIANAELIAVLRRC---------QAPYPVP  252 (364)
T ss_pred             cEEEEeCcchhhcCCcch--HHHHhhCCCEEEEecChhhccccc-ceeeeeeCCHHHHHHHHhc---------cCCCCCC
Confidence            999999999877422111  11122234444   7899887 45 8999999999999988742         1345667


Q ss_pred             HHHHHHHHHHHHHH--hh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHH
Q 010250          382 PVSCAVAIEALKIY--KE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYF  458 (514)
Q Consensus       382 pl~~aaa~aal~~~--~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~  458 (514)
                      .+++.++.++|+.-  .. .+..+.+++.++.+.+.|+.+..  +.......|.++++++.+              ...+
T Consensus       253 ~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~--~~~~~p~~g~f~~~~~~~--------------~~~~  316 (364)
T PRK04781        253 TPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPG--VRRVYPSQGNFLLVRFDD--------------AEAA  316 (364)
T ss_pred             HHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCC--CCeECCCCCcEEEEEcCC--------------HHHH
Confidence            77777777766531  11 12344566677778888876522  111234567888887741              2357


Q ss_pred             HHHHHHCCcEEEee------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          459 GAQCEKHGMLVRVS------GDNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       459 ~~~l~~~Gv~~~~~------g~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      .+.|.++||.++++      ++++||+   ..++++.++++++|++..
T Consensus       317 ~~~l~~~gI~v~~~~~~~~~~~~~Ris---~~~~~~~~~l~~al~~~~  361 (364)
T PRK04781        317 FQALLAAGVVVRDQRAAPRLSDALRIT---LGTPEQNDRVLAALQRTQ  361 (364)
T ss_pred             HHHHHHCCeEEeeCCCCCCCCCeEEEe---CCCHHHHHHHHHHHHHHH
Confidence            78899999999875      2479999   467899999999988754

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=99.71  E-value=1.8e-15  Score=153.85  Aligned_cols=288  Identities=15%  Similarity=0.124  Sum_probs=163.3

Q ss_pred             CchHHHHHHHHHHhcCcC-CCCeEEEeCChhHHHHHHHHHHHHHHhh-----cCCCCccEEEEEecCCcccceeeeecCC
Q 010250          143 TKPSLDLAKELLEMFTAS-KMAKVFFTNSGSEANDTQVKLVWYYNNA-----LGRPNKKKFIARQKSYHGSTLIAASLSG  216 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~-~~~~v~~~~sGseA~~~Alk~a~~~~~~-----~~~~~~~~ii~~~~~yHG~t~~~~~~s~  216 (514)
                      .+...+++++++++++.. ..+.++|++||++|+..++..++.....     ...++.+.+|+.+...|.....+....+
T Consensus        37 ~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g  116 (345)
T cd06450          37 TEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLD  116 (345)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHh
Confidence            444555666677776432 2347999999999999999988642110     0012233466666666665433322222


Q ss_pred             CccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHH
Q 010250          217 LPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYF  294 (514)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L  294 (514)
                      ...            ..+++...+             ..++++|++.+.+.  ...++.++++.-.++..|.+.+    +
T Consensus       117 ~~~------------~~v~~~~~~-------------~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~----~  167 (345)
T cd06450         117 VKV------------RLVPVDEDG-------------RMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP----L  167 (345)
T ss_pred             cCe------------EEeeeCCCC-------------CcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC----H
Confidence            211            111111100             12257777777541  1113445554444555787765    9


Q ss_pred             HHHHHHHHhcCCEEEEechhcCcccccccceecccCC-CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCc
Q 010250          295 EKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS  371 (514)
Q Consensus       295 ~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv-~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~  371 (514)
                      ++|.++|++||+++|+|++|.++............++ ..|.+  +++|.++++ +++|+++.+                
T Consensus       168 ~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p-~g~g~~~~~----------------  230 (345)
T cd06450         168 EEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVP-LGCSAVLVR----------------  230 (345)
T ss_pred             HHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCC-cchHHHHHH----------------
Confidence            9999999999999999999985421111000001111 24644  567987765 455544433                


Q ss_pred             ccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCC
Q 010250          372 FSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPF  448 (514)
Q Consensus       372 ~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~  448 (514)
                                   ..+..++++.+..   ++..++..++.+++.+.|+++....++.  ...+.++.+.+.+....    
T Consensus       231 -------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~--~~~~~iv~f~~~~~~~~----  291 (345)
T cd06450         231 -------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLG--EPNLSLVCFRLKPSVKL----  291 (345)
T ss_pred             -------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCceeEEEEEECCcchh----
Confidence                         2222333443332   3456777788888888887763222211  12345666665432000    


Q ss_pred             CCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCC-CHHHHHHHHHHHHH
Q 010250          449 PPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIM-SPEEVDELISKYGK  498 (514)
Q Consensus       449 ~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~-t~e~id~~~~~l~~  498 (514)
                        . .....+.+.|.++|+++.+.     +..+|+++...+ |++|+|++++.|++
T Consensus       292 --~-~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~  344 (345)
T cd06450         292 --D-ELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER  344 (345)
T ss_pred             --h-HHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence              0 01345778899996554432     346999988765 99999999999875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=99.71  E-value=1.9e-14  Score=151.04  Aligned_cols=345  Identities=18%  Similarity=0.208  Sum_probs=215.3

Q ss_pred             CCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCccccccc----cCCchHHHHHHHHHHhcC-cCCCCeEEEeCC
Q 010250           97 VNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYHSFWN----RTTKPSLDLAKELLEMFT-ASKMAKVFFTNS  170 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~~~~~~----~~~~~~~ela~~L~~~~~-~~~~~~v~~~~s  170 (514)
                      .+....+||..|.. .+ .+ ....+.+++.+.+...........    +..++...+++++....+ ....++|++|++
T Consensus        86 ~~~~~~i~f~~g~p-~~-~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G  163 (459)
T COG1167          86 EDDPSVIDFAGGLP-DP-SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSG  163 (459)
T ss_pred             cCCCceecCCCCCC-Cc-ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCC
Confidence            45567899887752 22 22 344566666665543221111112    223344445555542221 235579999999


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250          171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE  250 (514)
Q Consensus       171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (514)
                      ..+|++..+++..        ..++.|++=+++|++........ |..            +..++..+      .+    
T Consensus       164 ~q~al~l~~~~l~--------~pGd~v~vE~PtY~~~~~~~~~~-g~~------------~~~vp~d~------~G----  212 (459)
T COG1167         164 AQQALDLLLRLLL--------DPGDTVLVEDPTYPGALQALEAL-GAR------------VIPVPVDE------DG----  212 (459)
T ss_pred             HHHHHHHHHHHhC--------CCCCEEEEcCCCcHHHHHHHHHc-CCc------------EEecCCCC------CC----
Confidence            9999999888774        34578888899999864222211 110            11111110      01    


Q ss_pred             HHHHHHHHHHHHHHHHhCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecc
Q 010250          251 EYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDK  328 (514)
Q Consensus       251 ~~~~~~~~~le~li~~~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~  328 (514)
                          .++++||+.+...   ++.++.+.|. |+.+|...+ .+==++|.++|++||+++|=|+.+.-|-..+..- ....
T Consensus       213 ----~~~e~le~~~~~~---~~k~~y~~P~~qNPtG~tms-~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~  284 (459)
T COG1167         213 ----IDPEALEEALAQW---KPKAVYVTPTFQNPTGVTMS-LERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKA  284 (459)
T ss_pred             ----CCHHHHHHHHhhc---CCcEEEECCCCCCCCCCccC-HHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHh
Confidence                1157788877642   5778888886 677887664 4566789999999999999999999775444322 1111


Q ss_pred             cCCCCc----hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH--Hhh--ccH
Q 010250          329 YSIKPD----LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI--YKE--RNI  400 (514)
Q Consensus       329 ~gv~pD----iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~--~~~--~~~  400 (514)
                      +. .++    +-+|||.|+=| +++|++++++++++.+...       .+..+.+.+.+.+.+...-+..  +.+  ..+
T Consensus       285 ld-~~~rViy~gSFSK~l~Pg-lRlG~vv~p~~~~~~~~~~-------k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~l  355 (459)
T COG1167         285 LD-APGRVIYLGSFSKTLAPG-LRLGYVVAPPELIEKLLRL-------KQAADLGPSSLSQAALAAFLLSGHYDRHLRRL  355 (459)
T ss_pred             hC-CCCCEEEEeeehhhcccc-cceeeeeCCHHHHHHHHHH-------HHHhcCCCChHHHHHHHHHHHcCCHHHHHHHH
Confidence            11 123    33799999988 8999999999998888642       3445666666665555443431  111  234


Q ss_pred             HHHHHHHHHHHHhhhhhccCCCceeE-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC------
Q 010250          401 VEQVNKIAPKFQDGVKAFSDSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------  473 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l~~~~~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g------  473 (514)
                      ...++++.+.+.+.|++... +.... ...-|+++++.+++.-.           ...+.+.++++|+.+.+.|      
T Consensus       356 R~~y~~rr~~l~~~L~~~~~-~~~~~~~p~gG~flwl~l~~~~~-----------~~~l~~~a~~~gv~i~~~g~~f~~~  423 (459)
T COG1167         356 RREYARRRDALLEALAEYLP-ELATWTRPEGGLFLWLELPEGID-----------ARELLAAALEKGVVVTPLGSAFSAD  423 (459)
T ss_pred             HHHHHHHHHHHHHHHHHhCC-CCeeeecCCceEEEEEEcCCCCC-----------HHHHHHHHHHCCCEEEcCCccccCC
Confidence            55555666666666665411 12222 23338899999876421           4568899999999998732      


Q ss_pred             ----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          474 ----DNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       474 ----~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                          +.+||+.. ..++++|++++.+|.+++.+..
T Consensus       424 ~~~~~~~Rl~~s-~~~~e~i~~gi~~l~~~~~~~~  457 (459)
T COG1167         424 GDPRNGLRLSFS-SPSEEEIEEGIKRLAALLREAA  457 (459)
T ss_pred             CCCCCeEEEEcC-CCCHHHHHHHHHHHHHHHHHHh
Confidence                47999964 4568999999999999987653

>PRK14012 cysteine desulfurase; Provisional

Probab=99.70  E-value=2e-14  Score=149.43  Aligned_cols=337  Identities=18%  Similarity=0.187  Sum_probs=188.5

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHh--c-CCcccc---ccc-cCCchHHHHHHHHHHhcCcCCCCeEEEeCChh
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLN--T-LPFYHS---FWN-RTTKPSLDLAKELLEMFTASKMAKVFFTNSGS  172 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~--~-~~~~~~---~~~-~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGs  172 (514)
                      +.|||..+.      +.-++.+.+++.+.+.  . ....+.   ... ...+...++.+.++++++ .+.+.++|++||+
T Consensus         4 ~iyld~a~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g-~~~~~v~~~~g~t   76 (404)
T PRK14012          4 PIYLDYSAT------TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIG-ADPREIVFTSGAT   76 (404)
T ss_pred             eEEecCcCC------CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcC-cCcCeEEEeCCHH
Confidence            468886544      4468899999988875  2 111110   000 012345567788888874 3456799999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec--CCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL--SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE  250 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (514)
                      +|+..+++.+....   . +.++.||+.+..|+........+  .|..            +..++.++.+          
T Consensus        77 ~al~~~l~~l~~~~---~-~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~------------~~~v~~~~~g----------  130 (404)
T PRK14012         77 ESDNLAIKGAAHFY---Q-KKGKHIITSKTEHKAVLDTCRQLEREGFE------------VTYLDPQSNG----------  130 (404)
T ss_pred             HHHHHHHHHHHHhh---c-CCCCEEEEecCccHHHHHHHHHHHhCCCE------------EEEEccCCCC----------
Confidence            99999987663211   0 23456777666654432111111  1111            0111111110          


Q ss_pred             HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250          251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS  330 (514)
Q Consensus       251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g  330 (514)
                         ..+++++++++.    +++.+|++..+++.+|.+.|    +++|.++|++||+++|+|++|+ +|...    ++...
T Consensus       131 ---~~d~~~l~~~i~----~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~vivD~a~~-~g~~~----~~~~~  194 (404)
T PRK14012        131 ---IIDLEKLEAAMR----DDTILVSIMHVNNEIGVIQD----IAAIGEICRERGIIFHVDAAQS-VGKVP----IDLSK  194 (404)
T ss_pred             ---cCCHHHHHHhcC----CCCEEEEEECcCCCccchhh----HHHHHHHHHHcCCEEEEEcchh-cCCcc----cCccc
Confidence               012567777764    35678888888888998887    8999999999999999999997 54331    12223


Q ss_pred             CCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccC---CCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHH
Q 010250          331 IKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSN---TLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQ  403 (514)
Q Consensus       331 v~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~---~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~  403 (514)
                      ..+|++++|  |.++ + .++|+++++++....+.+...   ....+. .+|  .+.....+..++++.++.  ++..++
T Consensus       195 ~~~D~~~~s~~K~~g-p-~g~G~l~~~~~~~~~~~~~~~g~~~~~~~~-~gt--~~~~~~~~l~~al~~~~~~~~~~~~~  269 (404)
T PRK14012        195 LKVDLMSFSAHKIYG-P-KGIGALYVRRKPRVRLEAQMHGGGHERGMR-SGT--LPTHQIVGMGEAARIAKEEMATENER  269 (404)
T ss_pred             CCCCEEEEehhhccC-C-CceEEEEEecCCCCCCCceecCCCccCCcc-CCC--cCHHHHHHHHHHHHHHHhhHHHHHHH
Confidence            457888776  9654 3 357888888764333321000   000011 112  122223333345554432  235677


Q ss_pred             HHHHHHHHHhhhhhccCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE------------
Q 010250          404 VNKIAPKFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR------------  470 (514)
Q Consensus       404 ~~~~~~~l~~~L~~l~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~------------  470 (514)
                      .+++.+++.+.|+++....+..... .......+.|....            ...+...|.  ++.+.            
T Consensus       270 ~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~--~~~i~~g~~~~~~~~~~  335 (404)
T PRK14012        270 IRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVE------------GESLIMALK--DLAVSSGSACTSASLEP  335 (404)
T ss_pred             HHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcC------------HHHHHHhCC--CeEEEchhhhCCCCCCC
Confidence            7888888888887652211111100 11111122221110            112333332  22221            


Q ss_pred             ------------eeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          471 ------------VSGDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       471 ------------~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                                  ...+.||+++....|++|+|++++.|+++++.+.
T Consensus       336 ~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd~~~~~l~~~~~~~~  381 (404)
T PRK14012        336 SYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYAIELVRKSIGKLR  381 (404)
T ss_pred             CHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHHHHHHHHHHHHH
Confidence                        1125699999999999999999999999987764

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.70  E-value=8.6e-15  Score=146.32  Aligned_cols=326  Identities=18%  Similarity=0.237  Sum_probs=206.6

Q ss_pred             CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEE
Q 010250          118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF  197 (514)
Q Consensus       118 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~i  197 (514)
                      +|+|++|+.+..-.  +.+..|   .....+..+.|...+...+.+-+++..||+-|+|+|+....        ++.++|
T Consensus        17 ~~~V~~am~~~~~~--h~s~~F---~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~--------~pgdkV   83 (383)
T COG0075          17 PPRVLLAMARPMVG--HRSPDF---VGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLV--------EPGDKV   83 (383)
T ss_pred             CHHHHHHhcCCCCC--CCCHHH---HHHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhcc--------CCCCeE
Confidence            67888877665422  222211   25567778888888854444567778999999999997664        446789


Q ss_pred             EEEecCCcccceeeeec-CCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 010250          198 IARQKSYHGSTLIAASL-SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFI  276 (514)
Q Consensus       198 i~~~~~yHG~t~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavi  276 (514)
                      ++..++..|....-+.- -|.+.            ..+.++  |....           +++++++.+.+.  +++.+|.
T Consensus        84 Lv~~nG~FG~R~~~ia~~~g~~v------------~~~~~~--wg~~v-----------~p~~v~~~L~~~--~~~~~V~  136 (383)
T COG0075          84 LVVVNGKFGERFAEIAERYGAEV------------VVLEVE--WGEAV-----------DPEEVEEALDKD--PDIKAVA  136 (383)
T ss_pred             EEEeCChHHHHHHHHHHHhCCce------------EEEeCC--CCCCC-----------CHHHHHHHHhcC--CCccEEE
Confidence            99888888864332211 11111            111111  11111           157888888743  3454555


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEEe
Q 010250          277 AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILV  354 (514)
Q Consensus       277 vEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~  354 (514)
                      +-..-.++|++.|    +++|.++|++||+++|+|-|-+ +|  |..+-.+.||+  |+++-|  |+|++. -.+|.+..
T Consensus       137 ~vH~ETSTGvlnp----l~~I~~~~k~~g~l~iVDaVsS-~G--g~~~~vd~wgi--Dv~itgSQK~l~~P-PGla~v~~  206 (383)
T COG0075         137 VVHNETSTGVLNP----LKEIAKAAKEHGALLIVDAVSS-LG--GEPLKVDEWGI--DVAITGSQKALGAP-PGLAFVAV  206 (383)
T ss_pred             EEeccCcccccCc----HHHHHHHHHHcCCEEEEEeccc-CC--CcccchhhcCc--cEEEecCchhccCC-CccceeEE
Confidence            5444456688887    9999999999999999999976 64  33556677777  666544  999985 45788999


Q ss_pred             CHHHHHHhhhccCC---CC------cccc-cCCCCCcHH-HHHHHHHHHHHHhhcc---HHHHHHHHHHHHHhhhhhccC
Q 010250          355 SPEVSEVIHSQSNT---LG------SFSH-GFTYSGHPV-SCAVAIEALKIYKERN---IVEQVNKIAPKFQDGVKAFSD  420 (514)
Q Consensus       355 ~~~i~~~l~~~~~~---~~------~~~~-~~t~~~~pl-~~aaa~aal~~~~~~~---~~~~~~~~~~~l~~~L~~l~~  420 (514)
                      +++..+.+......   ..      .+.. +.+....|. ...+..++|+.+.+++   ..++.+++++.++++++++ .
T Consensus       207 S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-G  285 (383)
T COG0075         207 SERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-G  285 (383)
T ss_pred             CHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-C
Confidence            99999888764322   00      0111 223333344 4555568898887754   5788888999999999987 2


Q ss_pred             CCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCHHHHHHHHH
Q 010250          421 SPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSPEEVDELIS  494 (514)
Q Consensus       421 ~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~e~id~~~~  494 (514)
                      ..+..+. .....+..+..+....          ..+.....+.+.|+.+..+     |..+||.-.-..+.+++..++.
T Consensus       286 l~~~~~~~~~s~tvta~~~P~g~~----------~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~  355 (383)
T COG0075         286 LELFADPERRSPTVTAIKVPEGVD----------DKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALA  355 (383)
T ss_pred             CccccCcccCCCceEEEECCCCCC----------cHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHH
Confidence            2222111 1122333444433211          1122333344458877643     4689999998999999999999


Q ss_pred             HHHHHHHHHH
Q 010250          495 KYGKALKATE  504 (514)
Q Consensus       495 ~l~~~l~~~~  504 (514)
                      +|+.+|.++.
T Consensus       356 ale~~L~~~g  365 (383)
T COG0075         356 ALEAALRELG  365 (383)
T ss_pred             HHHHHHHHcC
Confidence            9999998764

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=99.69  E-value=4.2e-15  Score=151.67  Aligned_cols=280  Identities=15%  Similarity=0.163  Sum_probs=169.1

Q ss_pred             HHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCC
Q 010250          146 SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD  225 (514)
Q Consensus       146 ~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~  225 (514)
                      ..+|.+.+++.+ +...++|+++++++|++..+++...       .++++.|++.+++|..+...+... |...      
T Consensus        62 ~~~Lr~aia~~~-~~~~~~I~it~Gs~~~i~~~~~~~~-------~~g~d~vlv~~P~y~~y~~~~~~~-g~~v------  126 (354)
T PRK04635         62 PPELINAYSAYA-GVAPEQILTSRGADEAIELLIRAFC-------EPGQDSIACFGPTYGMYAISAETF-NVGV------  126 (354)
T ss_pred             HHHHHHHHHHHh-CcCHHHEEEeCCHHHHHHHHHHHhc-------CCCCCeEEEcCCChHHHHHHHHHc-CCEE------
Confidence            467888888876 3467899999999999999987652       234468999999997654322111 1111      


Q ss_pred             CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC
Q 010250          226 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD  305 (514)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g  305 (514)
                            ..++....|..             +.+.+++ +    + ++.+|++...++.+|.+.+ .+.+++|.+.|+  +
T Consensus       127 ------~~v~~~~~~~~-------------~~~~l~~-~----~-~~~li~i~nP~NPTG~~~~-~~~l~~l~~~~~--~  178 (354)
T PRK04635        127 ------KALPLTADYQL-------------PLDYIEQ-L----D-GAKLVFICNPNNPTGTVID-RADIEQLIEMTP--D  178 (354)
T ss_pred             ------EEEecCCCCCC-------------CHHHHHh-c----c-CCCEEEEeCCCCCCCccCC-HHHHHHHHHhCC--C
Confidence                  11111111110             1233432 1    1 3444444455666777665 344555555544  5


Q ss_pred             CEEEEechhcCcccccccceecccCCCCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcH
Q 010250          306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP  382 (514)
Q Consensus       306 illI~DEv~tG~gr~G~~~~~~~~gv~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~p  382 (514)
                      +++|+||+|..|... .. ..+.....+.++   +|||.++-+++++|++++++++++.+...       .  ..++.+.
T Consensus       179 ~~vivDeay~~~~~~-~s-~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~~~~~~l~~~-------~--~~~~~~~  247 (354)
T PRK04635        179 AIVVVDEAYIEFCPE-YS-VADLLASYPNLVVLRTLSKAFALAGARCGFTLANEELIEILMRV-------I--APYPVPL  247 (354)
T ss_pred             cEEEEeCchHhhccC-cc-hHHHHhhCCCEEEEechHHHhhhhHHHHhhhhCCHHHHHHHHhh-------c--CCCCCCH
Confidence            999999999877421 11 111111123333   78998863228999999999999887631       1  2344555


Q ss_pred             HHHHHHHHHHHHH--hh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHH
Q 010250          383 VSCAVAIEALKIY--KE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFG  459 (514)
Q Consensus       383 l~~aaa~aal~~~--~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~  459 (514)
                      ....++.++|+..  +. ++..+.+++.++.+.+.|+++   +.+......|.++.+.+.+              ...+.
T Consensus       248 ~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~---~~~~~~~~~g~f~~~~~~~--------------~~~~~  310 (354)
T PRK04635        248 PVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMY---GGAKVLEGNGNYVLAKFDD--------------VDAVF  310 (354)
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC---CCceECCCCCcEEEEECCC--------------HHHHH
Confidence            5666666666421  11 123445666667777777765   2122223446666666531              23477


Q ss_pred             HHHHHCCcEEEee-----CCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250          460 AQCEKHGMLVRVS-----GDNIMMSPPFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       460 ~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~e~id~~~~~l~~~  499 (514)
                      +.|.++||.++..     ++.+|++   ..+++|+++++++|++.
T Consensus       311 ~~l~~~gv~v~~~~~~~~~~~lRis---~~~~e~~~~l~~al~~~  352 (354)
T PRK04635        311 KALWDAGIVARAYKDPRLANCIRFS---FSNRAETDKLIGLIRNQ  352 (354)
T ss_pred             HHHHHCCEEEEECCCCCCCCeEEEE---eCCHHHHHHHHHHHHHh
Confidence            8889999999754     2469999   46899999999998753

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.68  E-value=1.4e-14  Score=151.94  Aligned_cols=326  Identities=13%  Similarity=0.076  Sum_probs=189.0

Q ss_pred             CCHHHHHHHHHHH-hcCCcc---ccccccCCchHHHHHH----HHHHhcCcCCCCeEEE---eCChhHHHHHHHHHHHHH
Q 010250          117 SEPRLVAAATAQL-NTLPFY---HSFWNRTTKPSLDLAK----ELLEMFTASKMAKVFF---TNSGSEANDTQVKLVWYY  185 (514)
Q Consensus       117 ~~p~v~~A~~~~l-~~~~~~---~~~~~~~~~~~~ela~----~L~~~~~~~~~~~v~~---~~sGseA~~~Alk~a~~~  185 (514)
                      ..|.|++|+...+ +++..+   .++++++. ...++++    +..+.|.. ..+...+   .+||+.||.+++....  
T Consensus        46 ~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~-~~d~lE~~~~~~~~~~f~~-~~~~~~~nv~~~SG~~AN~av~~aL~--  121 (475)
T PLN03226         46 TSRAVMEALGSCLTNKYSEGLPGARYYGGNE-YIDQIETLCQKRALEAFRL-DPEKWGVNVQPLSGSPANFAVYTALL--  121 (475)
T ss_pred             CCHHHHHHHhhHHhccccCCCCCCcCcCCCh-hHHHHHHHHHHHHHHHhCC-CcceeEEecCcCchHHHHHHHHHHhC--
Confidence            4789999999888 554432   34555443 4445443    34555532 2222223   3899999999998764  


Q ss_pred             HhhcCCCCccEEEEEec-----CCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHH
Q 010250          186 NNALGRPNKKKFIARQK-----SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL  260 (514)
Q Consensus       186 ~~~~~~~~~~~ii~~~~-----~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  260 (514)
                            .++++|+..+-     -.|++...+..++....+..          .+++.    .+..      ....++++|
T Consensus       122 ------~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~----------~~~y~----~~~~------~g~iD~d~L  175 (475)
T PLN03226        122 ------QPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFE----------SMPYR----LDES------TGLIDYDKL  175 (475)
T ss_pred             ------CCCCEEEECCCCcCcchhhhhhhcccccccceEEEE----------eeeee----ecCC------CCCcCHHHH
Confidence                  34567777443     12443322222222211100          00000    0000      011236888


Q ss_pred             HHHHHHhCCCcEEEEEE-ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh--c
Q 010250          261 EDLILKEGPETIAAFIA-EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--S  337 (514)
Q Consensus       261 e~li~~~~~~~~aaviv-Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~  337 (514)
                      ++++.+..   ...|++ +.+++.   ..+    +++|+++|++||++|++|++|. +|..+..+....++ ..|++  +
T Consensus       176 e~~l~~~~---pklIv~~~S~~s~---~~D----~a~i~~ia~~~ga~LlvD~AH~-~Gli~~~~~~~p~~-~~Div~~t  243 (475)
T PLN03226        176 EKKAMLFR---PKLIIAGASAYPR---DWD----YARMRKIADKVGALLMCDMAHI-SGLVAAQEAASPFE-YCDVVTTT  243 (475)
T ss_pred             HHHHhhcC---CeEEEEecCcCCC---ccC----HHHHHHHHHHcCCEEEEEchhh-hCcccCCCCCCCCC-CCeEEEec
Confidence            88876433   234444 666543   333    7899999999999999999997 65555432112222 36777  4


Q ss_pred             hhhhhcCCcccceeEEeCHHHH-----------HHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc---HHHH
Q 010250          338 FAKALSSAYMPIGAILVSPEVS-----------EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN---IVEQ  403 (514)
Q Consensus       338 ~sK~l~gG~~pig~v~~~~~i~-----------~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~---~~~~  403 (514)
                      ++|+|.|.  +-|++++++++.           +...... .  ....+++.+.++...++..++++.+.+.+   +.++
T Consensus       244 ~hK~L~GP--~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~-~--a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~  318 (475)
T PLN03226        244 THKSLRGP--RGGMIFFRKGPKPPKGQGEGAVYDYEDKIN-F--AVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQ  318 (475)
T ss_pred             CcccccCC--CceEEEEchhhcccccCCCccHHHHHHHhc-c--ccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence            67999874  336777787654           2211100 0  11122333455777777778899886543   5788


Q ss_pred             HHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----------C
Q 010250          404 VNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------G  473 (514)
Q Consensus       404 ~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------g  473 (514)
                      +.++.++|++.|++. ...++..-. ...+..+++.....          ....+...|.+.||++...          .
T Consensus       319 ~~~na~~L~~~L~~~-G~~l~~~~t-~~hi~lv~~~~~gi----------~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~  386 (475)
T PLN03226        319 VKANAAALANRLMSK-GYKLVTGGT-DNHLVLWDLRPLGL----------TGSRVEKVLDLAHITLNKNAVPGDSSALVP  386 (475)
T ss_pred             HHHHHHHHHHHHHhC-CCEEEcCCC-CCCEEEEEccCCCC----------CHHHHHHHHHHCCCEECCCCCCCCcccCCC
Confidence            999999999999874 333332111 13445555532211          1345667788899988632          2


Q ss_pred             CEEEEeCC----CCCCHHHHHHHHHHHHHHHH
Q 010250          474 DNIMMSPP----FIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       474 ~~iRi~p~----~~~t~e~id~~~~~l~~~l~  501 (514)
                      ..||+..|    ..++++|++++.+.|.++++
T Consensus       387 ~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~  418 (475)
T PLN03226        387 GGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVT  418 (475)
T ss_pred             CCcccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence            45888433    67889999999999999887

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.68  E-value=8e-15  Score=154.18  Aligned_cols=343  Identities=14%  Similarity=0.087  Sum_probs=193.0

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhc-CC--cc-ccccccCCchHHHH----HHHHHHhcCcCCCCeEEEe---
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNT-LP--FY-HSFWNRTTKPSLDL----AKELLEMFTASKMAKVFFT---  168 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~-~~--~~-~~~~~~~~~~~~el----a~~L~~~~~~~~~~~v~~~---  168 (514)
                      +..|.+..+-.     .-.|.+++++...+.+ +.  .. +.++.+. ....++    .++++++|.. +.+++.|+   
T Consensus        34 ~~~l~l~~sen-----~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~-~~~~~iE~~ar~~~a~lf~a-~~~~~~~~~~~  106 (452)
T PTZ00094         34 IEGLELIASEN-----FTSRAVLECLGSCFTNKYAEGLPGNRYYGGN-EVVDKIENLCQKRALEAFGL-DPEEWGVNVQP  106 (452)
T ss_pred             HcCeeEecccc-----cCCHHHHHHhcchhhccccCCCCCccccccc-hHHHHHHHHHHHHHHHHhCC-CcccceeecCC
Confidence            35666654421     2478999999888754 21  11 1112211 122223    3467777753 44556566   


Q ss_pred             CChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee-cCCCccccCCCCCCCCcccccCCCCcccCCCCCC
Q 010250          169 NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS-LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGE  247 (514)
Q Consensus       169 ~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (514)
                      +||++||..+++..+        ..+++||+. ..-||..+.... +...........     +....++.      .  
T Consensus       107 ~sgt~an~~v~~al~--------~~gd~Ii~~-~~ehg~~l~~~~~l~~~~~~~~~~~-----~~~~~~~~------~--  164 (452)
T PTZ00094        107 YSGSPANFAVYTALL--------QPHDRIMGL-DLPSGGHLTHGFYTAKKKVSATSIY-----FESLPYQV------N--  164 (452)
T ss_pred             CchHHHHHHHHHHhc--------CCCCEEEec-ccccCCcccccccccccccccceee-----eeeeeccc------C--
Confidence            799999999888763        223566664 445665432211 000000000000     00000000      0  


Q ss_pred             ChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-ee
Q 010250          248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC  326 (514)
Q Consensus       248 ~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~  326 (514)
                         .....+.++|++++.+..+   ..+++.  .+..|.+.|    +++|.++|+++|+++++|++|+ +|..+... ..
T Consensus       165 ---~~g~id~~~L~~~l~~~~~---~lvi~~--~s~~g~~~d----i~~I~~i~~~~ga~l~vDaaq~-~G~i~~~~~~~  231 (452)
T PTZ00094        165 ---EKGLIDYDKLEELAKAFRP---KLIIAG--ASAYPRDID----YKRFREICDSVGAYLMADIAHT-SGLVAAGVLPS  231 (452)
T ss_pred             ---CCCCcCHHHHHHHHHHhCC---CEEEEe--CCCCCCccC----HHHHHHHHHHcCCEEEEeccch-hccccCCCCCC
Confidence               0022346888888864332   234441  344666777    9999999999999999999997 76664321 11


Q ss_pred             cccCCCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc---cHH
Q 010250          327 DKYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER---NIV  401 (514)
Q Consensus       327 ~~~gv~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~---~~~  401 (514)
                      ...  ..|+++++  |+|.|. . .|++++++++.+.+......  .......-+.++...++..++++.+.+.   ++.
T Consensus       232 ~~~--~~D~l~~S~hK~l~GP-~-Gg~l~~~~~~~~~l~~~~~~--~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~  305 (452)
T PTZ00094        232 PFP--YADVVTTTTHKSLRGP-R-SGLIFYRKKVKPDIENKINE--AVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYA  305 (452)
T ss_pred             CCC--CCcEEEcCCccCCCCC-C-ceEEEEecccchHHHHhhcc--ccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHH
Confidence            111  46888765  999875 2 36777777655443321100  0111111134567777777888888542   467


Q ss_pred             HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------
Q 010250          402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---------  472 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------  472 (514)
                      +++.++.++|.+.|++. ...+..... ...+..+.+.....          ....+...|.++||.+...         
T Consensus       306 ~~i~~l~~~l~~~L~~~-g~~v~~~~~-~~~~~~v~~~~~~~----------~~~~~~~~L~~~gI~vs~~~~p~~~~~~  373 (452)
T PTZ00094        306 KQVLKNAKALAAALEKR-GYDLVTGGT-DNHLVLVDLRPFGI----------TGSKMEKLLDAVNISVNKNTIPGDKSAL  373 (452)
T ss_pred             HHHHHHHHHHHHHHHhC-CcEEecCCC-CCceEeecCCcCCC----------CHHHHHHHHHHCCcEEecccCCCCCcCC
Confidence            88999999999999764 222221100 01122333322110          1345667777789999521         


Q ss_pred             -CCEEEEeCCCCCC----HHHHHHHHHHHHHHHHH
Q 010250          473 -GDNIMMSPPFIMS----PEEVDELISKYGKALKA  502 (514)
Q Consensus       473 -g~~iRi~p~~~~t----~e~id~~~~~l~~~l~~  502 (514)
                       ...||++++..+|    ++||+++++.|.+++..
T Consensus       374 ~~~~vRis~~~~tt~g~~~~di~~l~~~l~~~~~~  408 (452)
T PTZ00094        374 NPSGVRLGTPALTTRGAKEKDFKFVADFLDRAVKL  408 (452)
T ss_pred             CCCeEEECCHHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence             2579999976665    99999999999998864

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.67  E-value=1.3e-15  Score=156.06  Aligned_cols=237  Identities=16%  Similarity=0.139  Sum_probs=155.5

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH  221 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~  221 (514)
                      ..+...+|+++++++++   .+.+++++||++|+..+++...        ..+++|++....|++.........      
T Consensus        38 ~~p~~~~le~~la~l~g---~~~a~~~~sG~~Ai~~~l~~l~--------~~gd~Vl~~~~~y~~~~~~~~~~~------  100 (369)
T cd00614          38 GNPTVDALEKKLAALEG---GEAALAFSSGMAAISTVLLALL--------KAGDHVVASDDLYGGTYRLFERLL------  100 (369)
T ss_pred             CChhHHHHHHHHHHHHC---CCCEEEEcCHHHHHHHHHHHHc--------CCCCEEEECCCCcchHHHHHHHHH------
Confidence            45667899999999873   3678999999999999998764        335678888888877531110000      


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                      ..++.   .+..++..                  +.+++++.+.    +++.+|++|.++++.|.+.+    +++|.++|
T Consensus       101 ~~~g~---~~~~v~~~------------------d~~~l~~~i~----~~~~~v~~e~~~np~g~~~d----l~~i~~la  151 (369)
T cd00614         101 PKLGI---EVTFVDPD------------------DPEALEAAIK----PETKLVYVESPTNPTLKVVD----IEAIAELA  151 (369)
T ss_pred             hhcCe---EEEEeCCC------------------CHHHHHHhcC----CCCeEEEEECCCCCCCeecC----HHHHHHHH
Confidence            00110   01111110                  1356666663    35788999999999998887    99999999


Q ss_pred             HhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCc-ccceeEEeCH-HHHHHhhhccCCCCcccccCC
Q 010250          302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAY-MPIGAILVSP-EVSEVIHSQSNTLGSFSHGFT  377 (514)
Q Consensus       302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~-~pig~v~~~~-~i~~~l~~~~~~~~~~~~~~t  377 (514)
                      ++||+++|+|+++. .+..     .......+|++  +++|.++|.. .+.|++++++ ++++.+...       .....
T Consensus       152 ~~~g~~livD~t~~-~~~~-----~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~-------~~~~g  218 (369)
T cd00614         152 HEHGALLVVDNTFA-TPYL-----QRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFL-------RLALG  218 (369)
T ss_pred             HHcCCEEEEECCCc-chhc-----CChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHH-------HHhhC
Confidence            99999999999986 2221     12223346877  5779998742 5678888877 888777632       11123


Q ss_pred             CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCcee----------EEEeeeeeEEEEEc
Q 010250          378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFA  439 (514)
Q Consensus       378 ~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~v~g~g~~~~i~~~  439 (514)
                      ...+|+.+++++..|+.+.  ...++..++.+++.+.|++...     +|...          ...+.|.++.+++.
T Consensus       219 ~~~~p~~a~~~l~~l~tl~--~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~  293 (369)
T cd00614         219 TILSPFDAWLLLRGLKTLP--LRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELK  293 (369)
T ss_pred             CCCCHHHHHHHHcCCCCHH--HHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeC
Confidence            4567888877777776443  2356677777888888876521     22110          12467889999986

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.67  E-value=3.4e-15  Score=145.03  Aligned_cols=331  Identities=19%  Similarity=0.201  Sum_probs=191.2

Q ss_pred             EEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHH
Q 010250          103 LDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV  182 (514)
Q Consensus       103 lD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a  182 (514)
                      +||.|.++.   | .+|++++|+.++-.-.   ... .+..+...++++++++++.   ...++|+.|||.||..+|...
T Consensus         2 ~~f~SDn~~---g-~~~~m~eam~~a~~~~---~~~-YG~D~~~~~~e~~~ae~~g---~~a~~Fv~sGT~aN~lal~~~   70 (342)
T COG2008           2 IDFRSDNVA---G-PTPEMREALAAANAVG---DDV-YGEDPTTNALEQRIAELFG---KEAALFVPSGTQANQLALAAH   70 (342)
T ss_pred             CccccCccC---C-CCHHHHHHHHhccccC---CCC-CCCCHHHHHHHHHHHHHhC---CceEEEecCccHHHHHHHHHh
Confidence            577777443   3 6899999998765321   111 2355667889999999983   478999999999999999876


Q ss_pred             HHHHhhcCCCCccEEEEEecCCcccce--eeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHH
Q 010250          183 WYYNNALGRPNKKKFIARQKSYHGSTL--IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL  260 (514)
Q Consensus       183 ~~~~~~~~~~~~~~ii~~~~~yHG~t~--~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  260 (514)
                      .        . +...+++...-|-.+.  ++....+.     .  .+.+.+     +        +    .-+..+++++
T Consensus        71 ~--------~-~~~~vi~~~~aHi~~~E~Ga~~~~~~-----~--~~~~~~-----~--------g----~~Gklt~e~v  117 (342)
T COG2008          71 C--------Q-PGESVICHETAHIYTDECGAPEFFGG-----G--QKLPIV-----P--------G----ADGKLTPEDV  117 (342)
T ss_pred             c--------C-CCCeEEEeccccceecccCcHHHHcC-----C--ceeccC-----C--------C----CCCCcCHHHH
Confidence            3        2 2233444444444321  11111110     0  000000     0        0    0011125777


Q ss_pred             HHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc--CcccccccceecccCCCCchh
Q 010250          261 EDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC--AFGRLGTMFGCDKYSIKPDLV  336 (514)
Q Consensus       261 e~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t--G~gr~G~~~~~~~~gv~pDiv  336 (514)
                      +..+...  ....+..++.|.-.+++|.+. |.++|++|.++|++||+.|++|-+--  ..--.|  -....+.--.|++
T Consensus       118 ~~~i~~~d~~~~~~~~~~~e~~~te~GtVy-~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg--~~~~~~~~~~D~v  194 (342)
T COG2008         118 EAAIRPDDIHHAPTPLAVLENTATEGGTVY-PLDELEAISAVCKEHGLPLHMDGARLANALVALG--VALKTIKSYVDSV  194 (342)
T ss_pred             HHhhcCCCcccCCCceEEEeeccCCCceec-CHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC--CCHHHHHhhCCEE
Confidence            7766531  122455666666666888665 67999999999999999999996521  000011  0111111124666


Q ss_pred             ch--hhhhcCCcccceeEE-eCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Q 010250          337 SF--AKALSSAYMPIGAIL-VSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQD  413 (514)
Q Consensus       337 ~~--sK~l~gG~~pig~v~-~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~  413 (514)
                      +|  +|+++   +|+++++ ++.++++.+....    + ..|+-+.-.-+-.++++.+|+.--......+.+++.++|.+
T Consensus       195 ~~~~tK~g~---~~~gAiv~gn~~~~~~a~~~r----K-~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~  266 (342)
T COG2008         195 SFCLTKGGG---APVGAIVFGNRDFAKRARRWR----K-RAGGLMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAE  266 (342)
T ss_pred             EEecccCCc---ceeeeEEEcCHHHHHHHHHHH----H-HhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence            54  46654   6888766 5778877765321    1 23444444445555555555421111224556666888888


Q ss_pred             hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHH
Q 010250          414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELI  493 (514)
Q Consensus       414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~  493 (514)
                      ++++....++...  ....++.+.++....          ........+...|++....+..+||..+..+|+++|++++
T Consensus       267 ~~~~~~G~~~~~~--~~tN~vf~~l~~~~i----------~~l~~~~~~~~~~~~~~~~~~~vRfvts~a~~~edv~~~~  334 (342)
T COG2008         267 GLEAKPGVKLAFP--VETNMVFVRLPESAI----------EALRLAGALFYRGVLIGAHGEIVRFVTSWATSEEDVDELV  334 (342)
T ss_pred             hhhhcCCceeccC--CcccEEEEECChHHH----------HHHHhhchhheeeeeccCCCceEEEEeeccCCHHHHHHHH
Confidence            8885433333222  344555565543210          0222334455566666555557999999999999999999


Q ss_pred             HHHHHHH
Q 010250          494 SKYGKAL  500 (514)
Q Consensus       494 ~~l~~~l  500 (514)
                      ..+++.+
T Consensus       335 ~~~~~~~  341 (342)
T COG2008         335 AAIKALL  341 (342)
T ss_pred             HHHHHhh
Confidence            9888764

>PRK09275 aspartate aminotransferase; Provisional

Probab=99.67  E-value=1.3e-14  Score=152.87  Aligned_cols=303  Identities=16%  Similarity=0.171  Sum_probs=162.2

Q ss_pred             CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcc
Q 010250          163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYW  240 (514)
Q Consensus       163 ~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~  240 (514)
                      ++|+.++++++|+..++......  ... ..+++|++.+++|..+.......+....           +..++.  ...|
T Consensus       162 ~~I~vT~Ga~~al~~~~~aL~~~--~ll-~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~-----------~v~v~~~~~~~f  227 (527)
T PRK09275        162 FDLFAVEGGTAAMCYIFDSLKEN--GLL-KAGDKIALMTPIFTPYLEIPELPRYDLE-----------VVHINADEENEW  227 (527)
T ss_pred             CeEEEeCCHHHHHHHHHHHHhhh--hcC-CCCCEEEEeCCChHHHHHHHHHcCCCeE-----------EEEeecCcccCC
Confidence            48999999999999988752100  001 3457899999999887433222111100           011111  1112


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh--cCCEEEEechhcCcc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK--YDILFIADEVICAFG  318 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~--~gillI~DEv~tG~g  318 (514)
                      +.             +.+++++++.   ++..+.+++.|.|+ +|.+ .+++.+++|.++|++  +|+++|+||+|..|.
T Consensus       228 ~~-------------d~~~l~~~~~---~~tkai~l~nP~NP-TG~v-~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~  289 (527)
T PRK09275        228 QY-------------PDSELEKLRD---PSIKALFLVNPSNP-PSVA-MSDESLEKIADIVNEKRPDLMIITDDVYGTFV  289 (527)
T ss_pred             CC-------------CHHHHHhhcC---CCCCEEEEeCCcCC-cCCC-CCHHHHHHHHHHHHhcCCCcEEEECCCChhhc
Confidence            21             1356666543   33345555667544 4544 467899999999965  599999999998773


Q ss_pred             cccccceecccCCCCc-h---hchhhhhcCCcccceeEEeCHH-----HHHHhh--------hccC--------------
Q 010250          319 RLGTMFGCDKYSIKPD-L---VSFAKALSSAYMPIGAILVSPE-----VSEVIH--------SQSN--------------  367 (514)
Q Consensus       319 r~G~~~~~~~~gv~pD-i---v~~sK~l~gG~~pig~v~~~~~-----i~~~l~--------~~~~--------------  367 (514)
                      .  ....  .....|+ +   -+|||.++-.+|++|+++++++     +++.+.        ..-.              
T Consensus       290 ~--~~~s--~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidr  365 (527)
T PRK09275        290 D--DFRS--LFAVLPYNTILVYSFSKYFGATGWRLGVIALHEDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDR  365 (527)
T ss_pred             c--cccC--HHHhCCCCEEEEeehhhhccCcHhHHhhhhcCchhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHH
Confidence            2  1111  1111233 2   2689977643399999999875     332220        0000              


Q ss_pred             ---CCCcccccCCCCCcHHHHHH-H----HHHHHHHhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEE
Q 010250          368 ---TLGSFSHGFTYSGHPVSCAV-A----IEALKIYKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGT  436 (514)
Q Consensus       368 ---~~~~~~~~~t~~~~pl~~aa-a----~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i  436 (514)
                         ....+....|.+.+...+.+ +    .++|+.-++  +...+.++++.+.+.+.|.    .+.. ..... +.+..+
T Consensus       366 lvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~~~~~~~Rr~~l~~~Lg----~~~~-~~~p~g~fY~~~  440 (527)
T PRK09275        366 LVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAMKDIIRRRYKALYEGLG----LPEP-EDPNNAAYYTLI  440 (527)
T ss_pred             HHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHcC----CCCc-CCCCCeeEEEEE
Confidence               00011122344444333333 3    223331110  1234455555555555552    1111 11223 345555


Q ss_pred             EEccCCCC--CCCCC----CccchHHHHHHHHH-HCCcEEEeeC------CEEEEeCCCC-CCHHHHHHHHHHHHHHHHH
Q 010250          437 EFADNKSP--NEPFP----PEWGIGAYFGAQCE-KHGMLVRVSG------DNIMMSPPFI-MSPEEVDELISKYGKALKA  502 (514)
Q Consensus       437 ~~~~~~~~--~~~~~----~~~~~~~~~~~~l~-~~Gv~~~~~g------~~iRi~p~~~-~t~e~id~~~~~l~~~l~~  502 (514)
                      ++......  ...+.    .... ...++..|+ +.||.+.|+.      ..+|++  ++ .+++++.++.++|.+.+++
T Consensus       441 di~~~~~~~~g~~f~~~l~~~~~-~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis--~a~~~~~~~~~~~~rl~~~l~~  517 (527)
T PRK09275        441 DLEEWAEKNYGKEFADYLKKNYS-PVDLLFRLAEETGVVLLPGGGFGGPEWSVRVS--LANLNEEDYAKIGKAIRKLLDE  517 (527)
T ss_pred             EhHHhhhhccCchhhhhhhccCC-HHHHHHHHHhcCCEEEeCchhhCCCCCeEEEE--EecCCHHHHHHHHHHHHHHHHH
Confidence            55431100  00000    0001 234555555 5699988752      369999  66 6889999999999999988


Q ss_pred             HHHHHHH
Q 010250          503 TEERVKE  509 (514)
Q Consensus       503 ~~~~~~~  509 (514)
                      ..++.+.
T Consensus       518 y~~~~~~  524 (527)
T PRK09275        518 YYEEYKK  524 (527)
T ss_pred             HHHHHHh
Confidence            8776543

>PLN02397 aspartate transaminase

Probab=99.66  E-value=1.7e-14  Score=150.51  Aligned_cols=217  Identities=15%  Similarity=0.132  Sum_probs=128.0

Q ss_pred             HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--cc-eeccc-CCC
Q 010250          257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MF-GCDKY-SIK  332 (514)
Q Consensus       257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--~~-~~~~~-gv~  332 (514)
                      ++.+++.+.+.. .++.++++...++.+|.+. +++.+++|.++|++||+++|.||+|.+|...+.  .. ....+ ...
T Consensus       181 ~~~l~~~l~~~~-~~~~~i~~~~P~NPTG~v~-s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~  258 (423)
T PLN02397        181 FDGLLEDLKAAP-DGSFVLLHACAHNPTGVDP-TPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDG  258 (423)
T ss_pred             HHHHHHHHHhCC-CCCEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcC
Confidence            355555554332 3345555554555566544 678999999999999999999999998854221  11 11111 111


Q ss_pred             Cchh---chhhhhcC-CcccceeEE--e-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH-------h-h
Q 010250          333 PDLV---SFAKALSS-AYMPIGAIL--V-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY-------K-E  397 (514)
Q Consensus       333 pDiv---~~sK~l~g-G~~pig~v~--~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~-------~-~  397 (514)
                      ++++   +|||.++- | +++|+++  + ++++++.+...-   ........++.+.+++.++.++|+.-       + -
T Consensus       259 ~~vI~~~SfSK~~~~~G-~RvG~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~  334 (423)
T PLN02397        259 HEILVAQSYAKNMGLYG-ERVGALSVVCKSADVAVRVKSQL---KLIARPMYSNPPIHGASIVATILGDPELFSEWTKEL  334 (423)
T ss_pred             CcEEEEEECcccCCCcc-ccceEEEEEeCCHHHHHHHHHHH---HHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            2233   68998873 5 9999984  4 566544332100   00011112234555666666656421       0 1


Q ss_pred             ccHHHHHHHHHHHHHhhhhhccCCC-ceeEEEeeee-eEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeCC
Q 010250          398 RNIVEQVNKIAPKFQDGVKAFSDSP-IIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSGD  474 (514)
Q Consensus       398 ~~~~~~~~~~~~~l~~~L~~l~~~~-~~~~v~g~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g~  474 (514)
                      +++.+.++++++.+.+.|+++ ..+ ....+...|. ++++.+.                ..++..|+ +.||.+.+.+ 
T Consensus       335 ~~~~~~~~~rr~~l~~~L~~~-~~~~~~~~~~p~gg~fl~~~l~----------------~~~~~~Ll~~~~V~v~~~~-  396 (423)
T PLN02397        335 KGMADRIISMRQKLYDALEAR-GSPGDWSHITKQIGMFSFTGLN----------------KEQVDRMTKEYHIYMTRDG-  396 (423)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc-CCCCCCCcccCCceEEEecCCC----------------HHHHHHHHHhCCEEECCCC-
Confidence            245667888888888888876 211 1112233444 4444442                12556664 6699987544 


Q ss_pred             EEEEeCCCC-CCHHHHHHHHHHHHHHHH
Q 010250          475 NIMMSPPFI-MSPEEVDELISKYGKALK  501 (514)
Q Consensus       475 ~iRi~p~~~-~t~e~id~~~~~l~~~l~  501 (514)
                        |++  ++ .+++.|++++++|+++++
T Consensus       397 --Ri~--~~~~~~~~i~~~~~~i~~~~~  420 (423)
T PLN02397        397 --RIS--MAGLSSKNVPYLADAIHAVVT  420 (423)
T ss_pred             --eEE--EeeCCHHHHHHHHHHHHHHHh
Confidence              888  54 899999999999999974

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=99.66  E-value=4.8e-14  Score=149.10  Aligned_cols=340  Identities=14%  Similarity=0.125  Sum_probs=189.5

Q ss_pred             CCCHHHHHHHHHHHhcCCccccc-----cccCCchHHHHHHHHHHhcCcCCCCeE-EEeCChhHHHHHHHHHHHHHHhhc
Q 010250          116 GSEPRLVAAATAQLNTLPFYHSF-----WNRTTKPSLDLAKELLEMFTASKMAKV-FFTNSGSEANDTQVKLVWYYNNAL  189 (514)
Q Consensus       116 h~~p~v~~A~~~~l~~~~~~~~~-----~~~~~~~~~ela~~L~~~~~~~~~~~v-~~~~sGseA~~~Alk~a~~~~~~~  189 (514)
                      |.+|.|.+++.+..... .++.+     ..+..+...++.+.++++++   ++.+ ++.++|+.+...++.+++.+...+
T Consensus        81 ~~~p~i~~~~~~~~~~~-~~tpYq~e~~sqG~lel~~~~~~~la~l~G---~~~~~l~~~~GA~a~~~~l~~~r~~~~~~  156 (481)
T PRK04366         81 KYNPKINEKVARLPGFA-ELHPLQPEETVQGALELMYELQEWLKEITG---MDAVTLQPAAGAHGELTGLLMIRAYHEAR  156 (481)
T ss_pred             CCCHHHHHHHHhCcchh-cCCCCCChhhhhHHHHHHHHHHHHHHHHhC---CCceEEEeCcHHHHHHHHHHHHHHHhhcc
Confidence            46788888887752221 12221     12334556677888888863   3344 445677777766665555433333


Q ss_pred             CCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250          190 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP  269 (514)
Q Consensus       190 ~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~  269 (514)
                      +..++++||+.++.|+... ..+...|...            ..++....++             .++++|++++.    
T Consensus       157 Gd~~~~~Vlv~~~~hp~~~-~~~~~~G~~v------------v~v~~~~~~~-------------~D~e~L~~~i~----  206 (481)
T PRK04366        157 GDTKRTEVIVPDSAHGTNP-ASAAMAGFKV------------VEIPSNEDGL-------------VDLEALKAAVG----  206 (481)
T ss_pred             CcCCCCEEEEcCCccHhHH-HHHHHcCCEE------------EEeecCCCCC-------------cCHHHHHhhcc----
Confidence            3224567888777664443 2222222211            1111111111             12466766663    


Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcC---
Q 010250          270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSS---  344 (514)
Q Consensus       270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~g---  344 (514)
                      +++++|++...+ ..|.+..   -+++|.++|+++|+++|+|+++. .+-+|.. ....+|  .|+++++  |.|++   
T Consensus       207 ~~t~~V~v~~Pn-~tG~~~~---dl~eI~~~a~~~gal~iVD~a~~-~~~~g~~-~~~~~G--aD~~~~~~hK~l~~P~g  278 (481)
T PRK04366        207 EDTAALMLTNPN-TLGLFER---NILEIAEIVHEAGGLLYYDGANL-NAILGKA-RPGDMG--FDVVHLNLHKTFSTPHG  278 (481)
T ss_pred             cCCeEEEEeCCC-Cccccch---HHHHHHHHHHHcCCEEEEEecCh-hhhcccC-CccccC--CCEEEEechhhcCCCCC
Confidence            245555554333 5565521   29999999999999999999985 3333321 122233  5887653  87763   


Q ss_pred             -CcccceeEEeCHHHHHHhhhccCC-CC-ccc----------ccCCCCCcHHHHHHHHHHHHHHhhccH---HHHHHHHH
Q 010250          345 -AYMPIGAILVSPEVSEVIHSQSNT-LG-SFS----------HGFTYSGHPVSCAVAIEALKIYKERNI---VEQVNKIA  408 (514)
Q Consensus       345 -G~~pig~v~~~~~i~~~l~~~~~~-~~-~~~----------~~~t~~~~pl~~aaa~aal~~~~~~~~---~~~~~~~~  408 (514)
                       |+..+|++++++++.+.+...--. .+ .+.          -.-.++++.+.+.++...+..+..+++   .++...+.
T Consensus       279 ~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a  358 (481)
T PRK04366        279 GGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNA  358 (481)
T ss_pred             CCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             324567788888887776321000 00 000          011223344555566666666555544   45567778


Q ss_pred             HHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe------eCCEEEEeCCC
Q 010250          409 PKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV------SGDNIMMSPPF  482 (514)
Q Consensus       409 ~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~------~g~~iRi~p~~  482 (514)
                      ++|+++|+++.+...  .  + ..+..+.+....     +.........+.+.|.++|+.+..      ..+.+|++|..
T Consensus       359 ~~l~~~L~~~~~~~~--~--~-~~~~~~~~~~~~-----~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~e  428 (481)
T PRK04366        359 NYLKARLKDIYDLPY--D--R-PCMHEFVLSGKK-----LKETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPTE  428 (481)
T ss_pred             HHHHHHhHhhCcccC--C--C-CeeEEEEEECcc-----ccccCCCHHHHHHHHHHCCccCCccccccccCCeEEEcccC
Confidence            999999987511111  1  1 011111111100     000000145688999999988751      14579999999


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250          483 IMSPEEVDELISKYGKALKATEERV  507 (514)
Q Consensus       483 ~~t~e~id~~~~~l~~~l~~~~~~~  507 (514)
                      ..|++|||++++.|+++.+++.+..
T Consensus       429 ~~t~edid~l~~~l~~i~~~~~~~~  453 (481)
T PRK04366        429 TESKETLDAFIAAMKQIAEEAKENP  453 (481)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCc
Confidence            9999999999999999988776543

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=99.65  E-value=8.3e-15  Score=154.04  Aligned_cols=346  Identities=14%  Similarity=0.160  Sum_probs=177.2

Q ss_pred             CCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHH-HHHHHhcCc--CCCC--eEEEeCChhHHHHHHHHHHHHHHhh
Q 010250          114 LGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLA-KELLEMFTA--SKMA--KVFFTNSGSEANDTQVKLVWYYNNA  188 (514)
Q Consensus       114 lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela-~~L~~~~~~--~~~~--~v~~~~sGseA~~~Alk~a~~~~~~  188 (514)
                      .|...|+++.++.+.+.. ..|... .+..+...+++ +.+.+.+..  ...+  +|++++||++|+..++......  .
T Consensus       104 p~~~~~~~~~~~~~~~~~-~~Y~~p-~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~--~  179 (521)
T TIGR03801       104 LGFDPDAFLYEMCDGIIG-DNYPVP-DRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKAN--E  179 (521)
T ss_pred             CCCCCCHHHHHHHHHhhc-CCCCCC-CCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHh--h
Confidence            455667788888777632 222111 11222333333 233333211  1223  7999999999999988752110  0


Q ss_pred             cCCCCccEEEEEecCCcccceeeeecC-CCccccCCCCCCCCcccccCCCC--c-----ccCCCCCCChhHHHHHHHHHH
Q 010250          189 LGRPNKKKFIARQKSYHGSTLIAASLS-GLPALHQKFDLPAPFVLHTDCPH--Y-----WRYAHPGETEEEYSTRLANNL  260 (514)
Q Consensus       189 ~~~~~~~~ii~~~~~yHG~t~~~~~~s-~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~~~~l  260 (514)
                      .. ..+++|++.+++|........... +..            +..+++..  .     |+.             +.+++
T Consensus       180 ll-~pGD~Vlv~~P~y~~y~~~~~l~~~g~~------------vv~i~~~~~~~~g~~~~~~-------------d~~~l  233 (521)
T TIGR03801       180 LL-KKGDKIALMTPIFTPYLEIPELPRYDFE------------VVRIKADEMTEDGTHTWQY-------------PDKEL  233 (521)
T ss_pred             cC-CCCCEEEEeCCCcHHHHHHHHHhcCCcE------------EEEeecccccccccccCCC-------------CHHHH
Confidence            12 335789999999987643221111 111            01111110  0     111             13566


Q ss_pred             HHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc--CCEEEEechhcCcccccccceecccCCCCc-h--
Q 010250          261 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY--DILFIADEVICAFGRLGTMFGCDKYSIKPD-L--  335 (514)
Q Consensus       261 e~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~--gillI~DEv~tG~gr~G~~~~~~~~gv~pD-i--  335 (514)
                      ++++.   ++..+.+++.|.|++ |. ..+++.+++|.++|++|  |+++|+||+|..|..  ...  ......|| +  
T Consensus       234 ~~~~~---~~~kai~l~nP~NPT-G~-vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~~~--sl~~~~~~~vI~  304 (521)
T TIGR03801       234 EKLRD---PSIKALFVVNPSNPP-SV-AMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD--DFR--SLFAELPYNTIG  304 (521)
T ss_pred             HHhcC---CCCcEEEEeCCCCCC-CC-CCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc--ccc--chhhhCCCCEEE
Confidence            65542   334455567776555 44 34678899999999987  999999999987732  111  11112243 2  


Q ss_pred             -hchhhhhcCCcccceeEEeCHH-HHHHhhhc---------cCCC--------------------CcccccCCCCCcHHH
Q 010250          336 -VSFAKALSSAYMPIGAILVSPE-VSEVIHSQ---------SNTL--------------------GSFSHGFTYSGHPVS  384 (514)
Q Consensus       336 -v~~sK~l~gG~~pig~v~~~~~-i~~~l~~~---------~~~~--------------------~~~~~~~t~~~~pl~  384 (514)
                       -+|||.++-.+|++|+++++++ +++.+...         ..++                    +......|.+.+...
T Consensus       305 v~SfSK~fg~~G~RlG~i~~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~  384 (521)
T TIGR03801       305 VYSFSKYFGATGWRLGTIALHKDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQ  384 (521)
T ss_pred             EEcchhhccCchhhhhhhhcCchHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHH
Confidence             2689987643399999999764 22211100         0000                    001111233333222


Q ss_pred             HH-----HHHHHHHHHhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCC--CCCCC----Cc
Q 010250          385 CA-----VAIEALKIYKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSP--NEPFP----PE  451 (514)
Q Consensus       385 ~a-----aa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~--~~~~~----~~  451 (514)
                      +.     ++.+.++.-.+  +...+.++++.+.+.+.| .+   +.......-|.+..+++......  ...|.    ..
T Consensus       385 Q~q~al~a~~all~~~~~y~~~~~~~~~~R~~~l~~~L-g~---~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~  460 (521)
T TIGR03801       385 QVQMALFSLFALMDKENAYKAETKDICRRREKLLFRGL-GL---PLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKN  460 (521)
T ss_pred             HHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHhc-CC---CCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhcc
Confidence            22     33444432110  123445555555555555 11   11111122345566666531100  00000    00


Q ss_pred             cchHHHHHHHHH-HCCcEEEeeC------CEEEEeCCCC-CCHHHHHHHHHHHHHHHHHHHH
Q 010250          452 WGIGAYFGAQCE-KHGMLVRVSG------DNIMMSPPFI-MSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       452 ~~~~~~~~~~l~-~~Gv~~~~~g------~~iRi~p~~~-~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      .. ...++.+|. +.||.+.|+.      ..+|++  ++ .+++++.++.++|.+.+++..+
T Consensus       461 ~~-~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRis--la~l~~~~~~~~~~rl~~~~~~~~~  519 (521)
T TIGR03801       461 YS-PVDVLFRLAEETGIVLLPGGGFGGPEWSVRVS--LANLNEYDYAEIGRAIRKILDEYYE  519 (521)
T ss_pred             CC-HHHHHHHHHHhCCEEEeCchhcCCCCCeEEEE--ecCCCHHHHHHHHHHHHHHHHHHHH
Confidence            01 234555554 6699998752      359999  65 7899999999999999876543

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.65  E-value=6.7e-15  Score=151.61  Aligned_cols=285  Identities=15%  Similarity=0.101  Sum_probs=170.5

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      .+...+|+++++++++   .+..++++||+.|+..++....        ..+++||+.++.|.+. .........     
T Consensus        60 ~pt~~~Le~~lA~l~G---~~~al~~~sG~~Ai~~~l~al~--------~~Gd~Vv~~~~~y~~~-~~~~~~~~~-----  122 (386)
T PRK06767         60 NPTVKLFEERMAVLEG---GEEALAFGSGMAAISATLIGFL--------KAGDHIICSNGLYGCT-YGFLEVLEE-----  122 (386)
T ss_pred             CcchHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEcCCcHHHH-HHHHHHHHh-----
Confidence            4456889999999974   3568889999999888876543        2346788777665433 221111000     


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++..   +..++..                  +.+++++.+.    +++.+|++|..++..|.+.+    +++|.++|+
T Consensus       123 ~~gi~---~~~~~~~------------------d~~~l~~~i~----~~tklV~lesp~NptG~v~d----l~~I~~la~  173 (386)
T PRK06767        123 KFMIT---HSFCDME------------------TEADIENKIR----PNTKLIFVETPINPTMKLID----LKQVIRVAK  173 (386)
T ss_pred             hcCeE---EEEeCCC------------------CHHHHHHhhC----cCceEEEEeCCCCCCceecC----HHHHHHHHH
Confidence            00100   0000100                  1356666553    35678888888888898887    899999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccc-eeEEeCHHHHHHhhhccCCCCcccccCCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPI-GAILVSPEVSEVIHSQSNTLGSFSHGFTYS  379 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pi-g~v~~~~~i~~~l~~~~~~~~~~~~~~t~~  379 (514)
                      ++|+++|+||+++ .+..+...   .+|  .|+++  ++|.++|.+.++ |+++++++.++.+....    ....|..  
T Consensus       174 ~~g~~vivD~a~a-~~~~~~pl---~~g--~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~----~~~~g~~--  241 (386)
T PRK06767        174 RNGLLVIVDNTFC-SPYLQRPL---ELG--CDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPM----RKDIGGI--  241 (386)
T ss_pred             HcCCEEEEECCCc-ccccCCch---hcC--CcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHH----HHHhCCC--
Confidence            9999999999986 22222211   123  47664  569998854675 77888888776653210    0011222  


Q ss_pred             CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCcee---------EEEeeeeeEEEEEccCCCCCCCCCC
Q 010250          380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIG---------EIRGTGLILGTEFADNKSPNEPFPP  450 (514)
Q Consensus       380 ~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~---------~v~g~g~~~~i~~~~~~~~~~~~~~  450 (514)
                      .+|+.+++++..|+.+.  ...++.+++..++.+.|++......+.         ..++.|.++.|++....        
T Consensus       242 ~~~~~a~l~~~~L~tl~--~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~--------  311 (386)
T PRK06767        242 MAPFDAWLLLRGLKTLA--VRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGK--------  311 (386)
T ss_pred             CCHHHHHHHHcCCCcHH--HHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCH--------
Confidence            35776666666665443  245677888888888887653222111         12356788899885321        


Q ss_pred             ccchHHHHHHHHHHCCcEEEee----------------------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          451 EWGIGAYFGAQCEKHGMLVRVS----------------------------GDNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       451 ~~~~~~~~~~~l~~~Gv~~~~~----------------------------g~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                        .....|.+.|...++.++-+                            .+-|||+.    --|+.+.+++-|+++|+
T Consensus       312 --~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~sv----GlE~~~dl~~dl~~al~  384 (386)
T PRK06767        312 --EETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSV----GLESWEDIVSDLEQALK  384 (386)
T ss_pred             --HHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEe----ccCCHHHHHHHHHHHHh
Confidence              01344666665444433311                            13488883    44567777777777765

>PRK08637 hypothetical protein; Provisional

Probab=99.65  E-value=6.9e-14  Score=144.53  Aligned_cols=291  Identities=11%  Similarity=0.064  Sum_probs=167.4

Q ss_pred             CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-Cccc
Q 010250          163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWR  241 (514)
Q Consensus       163 ~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~  241 (514)
                      +++++++|+++|+..++++..        ..++.|++.+++|...........|...            ..++.. +.+ 
T Consensus        70 ~~I~it~G~~~al~~~~~~l~--------~~gd~Vlv~~P~y~~~~~~~~~~~g~~v------------v~v~~~~~~~-  128 (388)
T PRK08637         70 SLPIVTNALTHGLSLVADLFV--------DQGDTVLLPDHNWGNYKLTFNTRRGAEI------------VTYPIFDEDG-  128 (388)
T ss_pred             ceeeEccchHHHHHHHHHHhc--------CCCCEEEEcCCCCccHHHHHHHhcCCEE------------EEecccCCCC-
Confidence            578999999999998888763        2346899999999876532211122111            111110 000 


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh-----cCCEEEEechhcC
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK-----YDILFIADEVICA  316 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~-----~gillI~DEv~tG  316 (514)
                               .   .+++++++.+.....+...++++...+|++|. ..+++.+++|.++|++     ||+++|.||+|.+
T Consensus       129 ---------~---~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~-~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~  195 (388)
T PRK08637        129 ---------G---FDTDALKEALQAAYNKGKVIVILNFPNNPTGY-TPTEKEATAIVEAIKELADAGTKVVAVVDDAYFG  195 (388)
T ss_pred             ---------c---CCHHHHHHHHHhhccCCCEEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHHHhcCCcEEEEecccchh
Confidence                     0   12567777665211122333444323555564 4567889999998886     9999999999998


Q ss_pred             cccccccc-e-e-cccCCCCch--h---chhhhhcCCcccceeEEeC------HHHHHHhhhccCCCCcccccCCCCCcH
Q 010250          317 FGRLGTMF-G-C-DKYSIKPDL--V---SFAKALSSAYMPIGAILVS------PEVSEVIHSQSNTLGSFSHGFTYSGHP  382 (514)
Q Consensus       317 ~gr~G~~~-~-~-~~~gv~pDi--v---~~sK~l~gG~~pig~v~~~------~~i~~~l~~~~~~~~~~~~~~t~~~~p  382 (514)
                      |-..+... . . ...+..+.+  +   ++||.++..++++|+++..      +++++.+....   ........++.|.
T Consensus       196 l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~s~  272 (388)
T PRK08637        196 LFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKV---KGLIRSNISNGPH  272 (388)
T ss_pred             cccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHH---HHHhhcccCCCCc
Confidence            85444321 1 1 111222332  2   5899766544999999853      67777765210   0000112345677


Q ss_pred             HHHHHHHHHHHH--Hhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHH
Q 010250          383 VSCAVAIEALKI--YKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAY  457 (514)
Q Consensus       383 l~~aaa~aal~~--~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~  457 (514)
                      ++++++.++|+.  +.+  ......++++.+.+.+.|++....+.+...+ ..|.++++.+.+.            ....
T Consensus       273 ~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~~~------------~~~~  340 (388)
T PRK08637        273 PSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLKGV------------DAEE  340 (388)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCChH------------HHHH
Confidence            888888777741  110  1122234444444455554321001122222 3466777776421            1345


Q ss_pred             HHHHHH-HCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          458 FGAQCE-KHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       458 ~~~~l~-~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      +.+.|+ ++||.+...+ +.+||+.. ..+++++++++++|.++++++
T Consensus       341 l~~~l~~~~gv~~~~~~~~~iRi~~~-~~~~~~i~~~~~~l~~~~~~~  387 (388)
T PRK08637        341 LRVHLLEKYGIGTIALNETDLRIAFS-CVEEEDIPELFDSIYKAIKDL  387 (388)
T ss_pred             HHHHHhhhcceEEEeccCCceEEEee-cCCHHHHHHHHHHHHHHHHhc
Confidence            778885 6799887554 46999943 268999999999999988754

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=99.64  E-value=1.1e-14  Score=145.06  Aligned_cols=349  Identities=16%  Similarity=0.158  Sum_probs=191.9

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccc-cccCCch-HHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSF-WNRTTKP-SLDLAKELLEMFTASKMAKVFFTNSGSEAND  176 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~-~~~~~~~-~~ela~~L~~~~~~~~~~~v~~~~sGseA~~  176 (514)
                      .-|||..+      .|-.+|+|.+|+.+.+.... .-|++ ++.-.+. .++..+.++++++.. ..+++||+++||++.
T Consensus        44 ~vyld~~a------t~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd-~~dIiFts~ATEs~N  116 (428)
T KOG1549|consen   44 PVYLDNQA------TGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINAD-PSDIVFTSGATESNN  116 (428)
T ss_pred             cEEEecCc------CCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCC-CCcEEEeCCchHHHH
Confidence            46888744      45579999999999876532 22333 2222333 344455667776544 455999999999999


Q ss_pred             HHHHHH-HHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          177 TQVKLV-WYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       177 ~Alk~a-~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      .+++-. |.+..    ..++.||.++ .-|.+...+....-..    ++     .+..+|.+.             -...
T Consensus       117 lvl~~v~~~~~~----~~~k~iitl~-~eH~~v~~s~~~l~~~----g~-----~Vt~lpv~~-------------~~~~  169 (428)
T KOG1549|consen  117 LVLKGVARFFGD----KTKKHIITLQ-TEHPCVLDSCRALQEE----GL-----EVTYLPVED-------------SGLV  169 (428)
T ss_pred             HHHHHhhccccc----cccceEEEec-ccCcchhHHHHHHHhc----Ce-----EEEEeccCc-------------cccc
Confidence            999865 54421    1122566654 4555543332211111    11     122222221             1112


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL  335 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi  335 (514)
                      +++.++..|.    .++.+|.++.++++.|+..|    +++|.++|+++|+.+++|-+|. .|..    .++.-.+.+|.
T Consensus       170 d~~~~~~~i~----~~T~lv~I~~Vnn~~gv~~P----v~EI~~icr~~~v~v~~DaAQa-vG~i----~vDV~eln~D~  236 (428)
T KOG1549|consen  170 DISKLREAIR----SKTRLVSIMHVNNEIGVLQP----VKEIVKICREEGVQVHVDAAQA-VGKI----PVDVQELNADF  236 (428)
T ss_pred             cHHHHHHhcC----CCceEEEEEecccCcccccc----HHHHHHHhCcCCcEEEeehhhh-cCCc----cccHHHcCchh
Confidence            2566666665    58899999999999999999    9999999999999999999997 6543    45666677899


Q ss_pred             hchh--hhhcCCcccceeEEeCHH---HHH-HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc--cHHHHHHHH
Q 010250          336 VSFA--KALSSAYMPIGAILVSPE---VSE-VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER--NIVEQVNKI  407 (514)
Q Consensus       336 v~~s--K~l~gG~~pig~v~~~~~---i~~-~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~--~~~~~~~~~  407 (514)
                      ++++  |.++-  -++|++++++.   +.. ....++.+.+.+..|.--   ...+..--++.++....  .....+.+.
T Consensus       237 ~s~s~HK~ygp--~~iGaLYvr~~~~~~~~~p~~~GGgq~r~~rsGT~~---~~~~~~~gsA~e~~~~~~~~~~~~~~~~  311 (428)
T KOG1549|consen  237 LSISAHKIYGP--PGIGALYVRRKRPRLRVEPPLSGGGQERGLRSGTVA---TPLAVGLGSAAEFVNKEMAYDEAIIKRL  311 (428)
T ss_pred             eeeecccccCC--CcceEEEEccCCCcccccCcccCCccccccccCCcC---chhhhhhHHHHHHHHhhcchhHHHHHHH
Confidence            8876  87765  34999999861   110 111111111222222111   22222223344544332  223344444


Q ss_pred             HHHHHhhhhh-ccCC--CceeEEEeeeeeEEEEEc------------cCCCCCCCCCCccchHHHHHHHHHHCCcEEEee
Q 010250          408 APKFQDGVKA-FSDS--PIIGEIRGTGLILGTEFA------------DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS  472 (514)
Q Consensus       408 ~~~l~~~L~~-l~~~--~~~~~v~g~g~~~~i~~~------------~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~  472 (514)
                      ...+..++.. +...  ......+ ...+..+-|.            .-.....+.+....  ......++..|+-....
T Consensus       312 ~~~ll~~i~~~~~~~~~~G~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~l~s~~a~~~~~--~epsy~l~~~G~~~~~~  388 (428)
T KOG1549|consen  312 SEKLLMGIGQSLPEVTLNGSGKSR-YPGLVSLSFPYVEGESLLMDLKDVALSSGSACTSAS--LEPSYVLRAIGVDEDLA  388 (428)
T ss_pred             HHHHHHHHhhhCchhhccCCcccc-cccceeeecccccCcchhhhhhhhhhcccchhhcCC--CCcchhhhhcCcchhhh
Confidence            5555554432 1110  0000000 1111222222            10000000000000  01123445556644444


Q ss_pred             CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          473 GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       473 g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ...|||+.....+++|++.+++.+.+.+..+
T Consensus       389 ~~~iRis~G~y~t~~di~~~~~~i~~~v~~~  419 (428)
T KOG1549|consen  389 HSSIRISIGRYTTEEDIDYLVDAIKKLVSLL  419 (428)
T ss_pred             cceeEEeeeeeCcHHHHHHHHHHHHHHHHhc
Confidence            5679999999999999999999998887654

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.64  E-value=6.1e-14  Score=144.88  Aligned_cols=216  Identities=14%  Similarity=0.119  Sum_probs=139.5

Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC--CCC
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS--IKP  333 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g--v~p  333 (514)
                      +.+++++++...   +. .|++-...+-++ ..|    +++|+++|++||++|++|++|+ +|-.|-....+.++  -..
T Consensus       208 D~d~l~~~~~~~---~p-lvii~g~S~~~~-~~d----l~~i~eia~~~gA~L~VD~AH~-~Gligg~~~~~~~~~~~~~  277 (493)
T PRK13580        208 DYDEIAALAREF---KP-LILVAGYSAYPR-RVN----FAKLREIADEVGAVLMVDMAHF-AGLVAGKVFTGDEDPVPHA  277 (493)
T ss_pred             CHHHHHHHHhhc---CC-EEEEeCccccCC-CcC----HHHHHHHHHHcCCEEEEECchh-hceeccccchhhcCCCCCC
Confidence            367888887642   22 344444444444 445    9999999999999999999997 66555211111111  146


Q ss_pred             chh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHH
Q 010250          334 DLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIA  408 (514)
Q Consensus       334 Div--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~  408 (514)
                      |++  |++|+|.|.  ..|++++++++.+.+...    .++..  +...+|..++++. +++.+.++   +..+++.++.
T Consensus       278 D~vtgT~hKaL~GP--~GG~I~~~~~l~~~L~~a----~P~i~--gg~l~p~iAA~av-Al~e~~~~ef~~y~~~l~~Na  348 (493)
T PRK13580        278 DIVTTTTHKTLRGP--RGGLVLAKKEYADAVDKG----CPLVL--GGPLPHVMAAKAV-ALAEARTPEFQKYAQQVVDNA  348 (493)
T ss_pred             cEEEeCChhhccCC--CeEEEEecHHHHHHHhhC----CCccc--CCCccHHHHHHHH-HHHHHhCccHHHHHHHHHHHH
Confidence            766  567999763  357888899998888531    12222  2223343333344 45555433   3688999999


Q ss_pred             HHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe-------e----CCEEE
Q 010250          409 PKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV-------S----GDNIM  477 (514)
Q Consensus       409 ~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~-------~----g~~iR  477 (514)
                      ++|++.|++. .++++.. .....++.+++.+...          ....+.+.|.+.||++..       .    ...||
T Consensus       349 ~~La~~L~~~-G~~vv~g-gTdshIV~V~lg~~~~----------~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLR  416 (493)
T PRK13580        349 RALAEGFLKR-GARLVTG-GTDNHLVLIDVTSFGL----------TGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIR  416 (493)
T ss_pred             HHHHHHHHhc-CCCccCC-CCCCCEEEEEeCCHHH----------HHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEE
Confidence            9999999876 3333211 0234667777754321          133566789999999862       2    24699


Q ss_pred             EeCCC----CCCHHHHHHHHHHHHHHHHH
Q 010250          478 MSPPF----IMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       478 i~p~~----~~t~e~id~~~~~l~~~l~~  502 (514)
                      |+++.    .++++|++++++.|.++++.
T Consensus       417 Ig~~A~ttrg~teedi~~iad~l~~~l~~  445 (493)
T PRK13580        417 LGTPALTTLGMGSDEMDEVAELIVKVLSN  445 (493)
T ss_pred             eccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence            99988    55799999999999888764

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=99.63  E-value=2.3e-14  Score=134.14  Aligned_cols=333  Identities=16%  Similarity=0.136  Sum_probs=205.9

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVK  180 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk  180 (514)
                      ...|+-|-.-+    -.-.+.++||.++...-..|     +..+...+|+++.++++   +.+-.+|.+||+..|..|++
T Consensus        22 ~~vDLRSDTvT----~PTdeMr~am~eA~vgDdVy-----GeD~tt~rLE~~vA~l~---GKEAgLFv~SGTmgNllaIm   89 (384)
T KOG1368|consen   22 RSVDLRSDTVT----VPTDEMRRAMAEASVGDDVY-----GEDPTTNRLEQRVAELF---GKEAGLFVPSGTMGNLLAIM   89 (384)
T ss_pred             ecccccccccc----CChHHHHHHHhhcccCcccc-----cCCccHHHHHHHHHHHh---CccceeeecccccccHHHHH
Confidence            45677665432    23457788887765322211     23445678999999998   55789999999999999998


Q ss_pred             HHHHHHhhcCCCCccEEEEEecC-Ccccceeeee-cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250          181 LVWYYNNALGRPNKKKFIARQKS-YHGSTLIAAS-LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN  258 (514)
Q Consensus       181 ~a~~~~~~~~~~~~~~ii~~~~~-yHG~t~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (514)
                      .=+.       .+...||.=+.+ .|-+-.++++ +++....        +.    . +            ++....+++
T Consensus        90 ~Hc~-------~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~--------tv----~-~------------e~dgtm~le  137 (384)
T KOG1368|consen   90 VHCH-------QRGSEIIVGDRAHIHRYEQGGISQLAGVHVR--------TV----K-N------------ENDGTMDLE  137 (384)
T ss_pred             HHhc-------CCCceEEeccchheeehhccChhhhccceeE--------ee----e-e------------CCCCeeeHH
Confidence            6541       123344443222 2333333332 1111000        00    0 0            011223368


Q ss_pred             HHHHHHHH----hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc-ccccceecccCCCC
Q 010250          259 NLEDLILK----EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR-LGTMFGCDKYSIKP  333 (514)
Q Consensus       259 ~le~li~~----~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr-~G~~~~~~~~gv~p  333 (514)
                      ++|+.+..    .+...+..|.+|.-++..|-.+.|-+|+.++.+||++||+-|.+|-+-- |-- ....-....+.-..
T Consensus       138 dIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi-~NAavasgV~vk~i~~~f  216 (384)
T KOG1368|consen  138 DIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARI-FNAAVASGVPVKKICSAF  216 (384)
T ss_pred             HHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhh-hhHHHHcCCCHHHHHHhh
Confidence            88888763    2223578899999877666566778999999999999999999996532 100 00000111221123


Q ss_pred             ch--hchhhhhcCCcccceeE-EeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Q 010250          334 DL--VSFAKALSSAYMPIGAI-LVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPK  410 (514)
Q Consensus       334 Di--v~~sK~l~gG~~pig~v-~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~  410 (514)
                      |-  +||||+|+   .|+|-+ ++++++++.....    +. ..|+.+-.+-+-|++|+.+|+.-  -.......++...
T Consensus       217 DSVsiCLSKglg---APVGSViVG~k~FI~kA~~~----RK-alGGGmRQsGvLaaaaLval~~~--~~~L~~dHk~A~~  286 (384)
T KOG1368|consen  217 DSVSICLSKGLG---APVGSVIVGSKDFIDKARHF----RK-ALGGGMRQSGVLAAAALVALDEN--VPLLRADHKRAKE  286 (384)
T ss_pred             hhhhhhhhccCC---CCcccEEEccHHHHHHHHHH----HH-HhcCchhHHHHHHHHHHHHhhcc--hHHHHHHHHHHHH
Confidence            43  48999998   477755 5677887765421    11 23455555667888888888732  2256677777888


Q ss_pred             HHhhhhhccCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHH
Q 010250          411 FQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEE  488 (514)
Q Consensus       411 l~~~L~~l~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~  488 (514)
                      +.+.++...+.+  ..+. ....|..+.+....-          -.+.++..+.+.|+++.... ..+|+.....+|+++
T Consensus       287 lAe~~~~~~~i~--v~v~a~etNiv~~~l~q~~~----------~~~~l~~~~~k~gi~lm~~~s~r~Rivlh~Qvt~~~  354 (384)
T KOG1368|consen  287 LAEYINTPEEIR--VEVPAVETNIVNMVLCQARL----------TAEELCKFLEKNGILLMGGASRRIRIVLHHQVTDED  354 (384)
T ss_pred             HHHHhcccccee--eecchhhcceeeeecccccC----------CHHHHHHHHHHCCeEEeeccccceEEEEEEecCHHH
Confidence            888877553222  2232 344566666643321          25678999999999998754 459999889999999


Q ss_pred             HHHHHHHHHHHH
Q 010250          489 VDELISKYGKAL  500 (514)
Q Consensus       489 id~~~~~l~~~l  500 (514)
                      ++.++..|.+.+
T Consensus       355 ve~~~~~~~k~~  366 (384)
T KOG1368|consen  355 VEYVKSVLSKKF  366 (384)
T ss_pred             HHHHHHHHHHHH
Confidence            999999995444

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.63  E-value=1.3e-14  Score=149.07  Aligned_cols=236  Identities=16%  Similarity=0.158  Sum_probs=146.0

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      .+...+++++|+++++   .+.+++++||++|+..+++...        ..+++||+... .||.+.....     ....
T Consensus        53 ~p~~~~le~~la~l~g---~~~~~~~~sG~~Ai~~al~al~--------~~Gd~Vl~~~~-~~~~t~~~~~-----~~~~  115 (380)
T TIGR01325        53 NPTVAAFEERIAALEG---AERAVATATGMSAIQAALMTLL--------QAGDHVVASRS-LFGSTVGFIS-----EILP  115 (380)
T ss_pred             CchHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEecC-CcchHHHHHH-----HHHH
Confidence            4557889999999873   3678999999999999997653        23456777654 4454322111     0000


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++.   .+..++.+                  +.+++++.+.    +++++|++|.++++.|.+.+    +++|.++|+
T Consensus       116 ~~g~---~v~~v~~~------------------d~~~l~~~i~----~~tklV~le~p~np~g~~~d----l~~I~~la~  166 (380)
T TIGR01325       116 RFGI---EVSFVDPT------------------DLNAWEAAVK----PNTKLVFVETPSNPLGELVD----IAALAELAH  166 (380)
T ss_pred             HhCC---EEEEECCC------------------CHHHHHHhcC----CCceEEEEECCCCCCCeeeC----HHHHHHHHH
Confidence            1111   11111111                  1355665553    35789999988888888876    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccc-eeEEeCHHHHHHhhhccCCCCcccccCCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPI-GAILVSPEVSEVIHSQSNTLGSFSHGFTYS  379 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pi-g~v~~~~~i~~~l~~~~~~~~~~~~~~t~~  379 (514)
                      ++|+++|+||+++.+ ..     .......+|+++  ++|.++|++..+ |++++++++++.+....     ..++.  .
T Consensus       167 ~~gi~livD~a~~~~-~~-----~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~-----~~~g~--~  233 (380)
T TIGR01325       167 AIGALLVVDNVFATP-VL-----QQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSEELMAEVAVYL-----RHTGP--A  233 (380)
T ss_pred             HcCCEEEEECCCccc-cc-----CCchhhCCCEEEeeccceecCCCCeEEEEEEeCHHHHHHHHHHH-----HhhCC--C
Confidence            999999999998632 11     111233468875  679999854555 66777888877776311     11222  2


Q ss_pred             CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEc
Q 010250          380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFA  439 (514)
Q Consensus       380 ~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~  439 (514)
                      .+|..+..++..++.+..  ..++..+++..+.+.|++..     .+|...          ...|.|.++.|++.
T Consensus       234 ~~p~~a~~~l~~l~tl~~--r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~  306 (380)
T TIGR01325       234 MSPFNAWVLLKGLETLSL--RMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA  306 (380)
T ss_pred             CCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC
Confidence            356666666666665543  24555556666666665432     122211          12467889999986

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.63  E-value=4.4e-14  Score=145.28  Aligned_cols=321  Identities=13%  Similarity=0.052  Sum_probs=185.2

Q ss_pred             CHH-HHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeC-ChhHHHHHHHHHHHHHHhhcCCCCcc
Q 010250          118 EPR-LVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTN-SGSEANDTQVKLVWYYNNALGRPNKK  195 (514)
Q Consensus       118 ~p~-v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~-sGseA~~~Alk~a~~~~~~~~~~~~~  195 (514)
                      +|+ |++|+.+..-...+...   .......+..+.|++++...+.++|+|+. |||++++.++...+        .+++
T Consensus        24 ~~~~v~~a~~~~~~~~~hr~~---~f~~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~--------~~~~   92 (378)
T PRK03080         24 RPGWQLEALADALLGRSHRQK---PVKALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLL--------GARR   92 (378)
T ss_pred             ChHHHHHHHHhhhcccCcCCH---HHHHHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcC--------CCCc
Confidence            577 88888765421111111   12345567778888888533345788875 99999999997653        2122


Q ss_pred             EEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250          196 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF  275 (514)
Q Consensus       196 ~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav  275 (514)
                      ..++. .+.||........-     +.+..    .+..++.+.  .     ..         -++++ +..     ...|
T Consensus        93 ~~vi~-~g~f~~~~~~~~~~-----~~g~~----~v~~~~~~~--g-----~~---------~d~~~-i~~-----~~~V  140 (378)
T PRK03080         93 VDHLA-WESFGSKWATDVVK-----QLKLE----DPRVLEADY--G-----SL---------PDLSA-VDF-----DRDV  140 (378)
T ss_pred             ceEEE-eCHHHHHHHHHHHh-----hcCCC----CceEeccCC--C-----CC---------CCHhh-cCC-----CCCE
Confidence            23333 45666532211000     00000    011111110  0     00         01111 111     1235


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEE
Q 010250          276 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAIL  353 (514)
Q Consensus       276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~  353 (514)
                      .+-.+.+.+|.+.|    +++|.+  ++||+++|+|-+|+ +|..  .  ++..+  .|++++|  |+|++. ..+|+++
T Consensus       141 ~~~h~~t~tG~~~p----i~~I~~--~~~g~~~vVDa~qs-~G~~--p--idv~~--iD~~~~s~~K~l~~P-~G~g~l~  206 (378)
T PRK03080        141 VFTWNGTTTGVRVP----VARWIG--ADREGLTICDATSA-AFAL--P--LDWSK--LDVYTFSWQKVLGGE-GGHGMAI  206 (378)
T ss_pred             EEEecCCccceecc----chhhcc--ccCCCeEEEecccc-cccC--C--CCHHH--CcEEEEehhhhCCCC-CceEEEE
Confidence            66667777788988    888888  78999999999998 5433  2  22222  4888766  999885 4589999


Q ss_pred             eCHHHHHHhhhccCCC---------------CcccccCCCCCc-HHHHHHHHHHHHHHhhc-c---HHHHHHHHHHHHHh
Q 010250          354 VSPEVSEVIHSQSNTL---------------GSFSHGFTYSGH-PVSCAVAIEALKIYKER-N---IVEQVNKIAPKFQD  413 (514)
Q Consensus       354 ~~~~i~~~l~~~~~~~---------------~~~~~~~t~~~~-pl~~aaa~aal~~~~~~-~---~~~~~~~~~~~l~~  413 (514)
                      ++++..+.+.+.....               .....++|++.. ..+..+..++|+.+.+. +   +.++.+++.+++++
T Consensus       207 v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~  286 (378)
T PRK03080        207 LSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYD  286 (378)
T ss_pred             ECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence            9999988876421000               000112233333 34455557788888764 3   45677788888888


Q ss_pred             hhhhccCCCcee--EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCH
Q 010250          414 GVKAFSDSPIIG--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSP  486 (514)
Q Consensus       414 ~L~~l~~~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~  486 (514)
                      .|+++.......  .-...+.++.+.+++...         .....+...+.++|+++..+     ++.+|+++...+|+
T Consensus       287 ~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~~---------~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~  357 (378)
T PRK03080        287 WAEKTPWATPLVADPATRSNTSVTLDFVDAQA---------AVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEP  357 (378)
T ss_pred             HHHhCCCcccccCCccccCccEEEEEcCCchH---------HHHHHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCH
Confidence            888763221111  111122456665543100         01223556677778887642     35699999999999


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 010250          487 EEVDELISKYGKALKATE  504 (514)
Q Consensus       487 e~id~~~~~l~~~l~~~~  504 (514)
                      +||+.+++.|++++++++
T Consensus       358 ~di~~l~~al~~~~~~~~  375 (378)
T PRK03080        358 ADVEALTPWLDWAFERLK  375 (378)
T ss_pred             HHHHHHHHHHHHHHHHHh
Confidence            999999999999877654

>PLN02242 methionine gamma-lyase

Probab=99.63  E-value=1.8e-14  Score=149.31  Aligned_cols=238  Identities=14%  Similarity=0.185  Sum_probs=146.6

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH  221 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~  221 (514)
                      ..+...+|++++++++   +.+.+++++||++|+..++....        ..++.||+.++.|.+.........     .
T Consensus        74 ~~Pt~~~LE~~lA~l~---g~~~~l~~~sG~~Ai~~al~al~--------~~GD~Vl~~~~~Y~~~~~~~~~~~-----~  137 (418)
T PLN02242         74 FNPTVLNLGRQMAALE---GTEAAYCTASGMSAISSVLLQLC--------SSGGHVVASNTLYGGTHALLAHFL-----P  137 (418)
T ss_pred             CChhHHHHHHHHHHHh---CCCeEEEEccHHHHHHHHHHHHh--------CCCCEEEEcCCcHHHHHHHHHHhh-----h
Confidence            3566789999999987   44678999999999999998664        335678888887755421100000     0


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                      ..++.   .+..++..                  +.+++++++.   ++++.+|++|.++++.|.+.+    +++|.++|
T Consensus       138 ~~~G~---~~~~~d~~------------------d~e~l~~~i~---~~~tklV~lesp~NPtG~v~d----l~~I~~la  189 (418)
T PLN02242        138 RKCNI---TTTFVDIT------------------DLEAVKKAVV---PGKTKVLYFESISNPTLTVAD----IPELARIA  189 (418)
T ss_pred             hccCc---eEEEcCCC------------------CHHHHHHhcC---cCCCEEEEEecCCCCCCcccC----HHHHHHHH
Confidence            00010   00001110                  1466666663   224788999998888898876    99999999


Q ss_pred             HhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccc-eeEEeCHHHHHHhhhccCCCCccccc--C
Q 010250          302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPI-GAILVSPEVSEVIHSQSNTLGSFSHG--F  376 (514)
Q Consensus       302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pi-g~v~~~~~i~~~l~~~~~~~~~~~~~--~  376 (514)
                      ++||+++|+||+|+.+ ...    ...+|  .|++  +++|.++|++.++ |++++++++++.+...       ..+  .
T Consensus       190 ~~~gi~livDea~~~~-~~~----~~~~g--~divv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~-------~~~~~~  255 (418)
T PLN02242        190 HEKGVTVVVDNTFAPM-VLS----PARLG--ADVVVHSISKFISGGADIIAGAVCGPAELVNSMMDL-------HHGALM  255 (418)
T ss_pred             HHhCCEEEEECCCCcc-CCC----HHHcC--CcEEEEeCccccCCCCCceEEEEEcCHHHHHHHHHH-------hhhhhh
Confidence            9999999999999743 221    11223  4665  5789998765674 7888899888887632       111  1


Q ss_pred             CCCCcHHHHHHHHHH--HHHHhhccHHHHHHHHHHHHHhhhhhcc---CCCcee----------EE---EeeeeeEEEEE
Q 010250          377 TYSGHPVSCAVAIEA--LKIYKERNIVEQVNKIAPKFQDGVKAFS---DSPIIG----------EI---RGTGLILGTEF  438 (514)
Q Consensus       377 t~~~~pl~~aaa~aa--l~~~~~~~~~~~~~~~~~~l~~~L~~l~---~~~~~~----------~v---~g~g~~~~i~~  438 (514)
                      .++..+....|++.+  ++.+.  ...++..++++++.+.|++..   .+|...          ..   .|.|.++.|++
T Consensus       256 ~~g~~~~~~~A~l~~~~l~tl~--~r~~~~~~~a~~la~~L~~~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l  333 (418)
T PLN02242        256 LLGPTMNPKVAFELSERLPHLS--LRMKEHCRRAMEYAKRMKELGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDM  333 (418)
T ss_pred             ccCCCCCHHHHHHHHcCCCcHH--HHHHHHHHHHHHHHHHHHhCCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEE
Confidence            112222223333322  22222  235677778888888887651   122211          12   36788999999


Q ss_pred             c
Q 010250          439 A  439 (514)
Q Consensus       439 ~  439 (514)
                      .
T Consensus       334 ~  334 (418)
T PLN02242        334 D  334 (418)
T ss_pred             C
Confidence            5

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.62  E-value=1.8e-13  Score=141.57  Aligned_cols=353  Identities=16%  Similarity=0.182  Sum_probs=187.1

Q ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250           97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND  176 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~  176 (514)
                      .-|..||||.+-.++       ..+.+++.+++......   | .......+|++.+++++   +.+.+++++||++|+.
T Consensus        17 ~~~~v~iDlltds~t-------~ams~~~~~a~~~gd~~---Y-~~~~g~~~Leeaia~~~---g~~~vv~t~~Gt~Al~   82 (431)
T cd00617          17 RSEDVYIDLLTDSGT-------GAMSDYQWAAMMLGDEA---Y-AGSKSFYDLEDAVQDLF---GFKHIIPTHQGRGAEN   82 (431)
T ss_pred             CCCCcCCCCCCCCCc-------HHHHHHHHHHHHhCCCc---c-CCCCCHHHHHHHHHHHH---CCCeEEEcCCHHHHHH
Confidence            356788999876543       34555555555443221   1 13344678999999998   4578999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL  256 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (514)
                      .++++..       .++ +. |...+.|..+.......++.+.... ...  ....  .....|++           ..+
T Consensus        83 la~~al~-------~pG-D~-V~~~~~f~~~~~~i~~~Ga~pv~v~-i~~--~~~~--~~~~pf~g-----------niD  137 (431)
T cd00617          83 ILFSILL-------KPG-RT-VPSNMHFDTTRGHIEANGAVPVDLV-IDE--AHDA--QELIPFKG-----------NID  137 (431)
T ss_pred             HHHHHhC-------CCC-CE-EccCCcccchHHHHHhCCCEeEEEe-ccc--cccc--ccccCCCC-----------CcC
Confidence            9987652       133 34 4455555443222222222222110 000  0000  00001111           123


Q ss_pred             HHHHHHHHHHhCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc----------ccccccce
Q 010250          257 ANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF----------GRLGTMFG  325 (514)
Q Consensus       257 ~~~le~li~~~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~----------gr~G~~~~  325 (514)
                      +++|++++.+.+.+++++|+++-. +..+|. +.+.+.|++|+++|++||++||.|+++.-.          |..+....
T Consensus       138 ~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~-~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~  216 (431)
T cd00617         138 VAKLEKLIDEVGAENIPYIVLTITNNTAGGQ-PVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIA  216 (431)
T ss_pred             HHHHHHHhCcccCCCccEEEEECCcCCCCCc-cCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHH
Confidence            688888887543345777777644 444565 456788999999999999999999996511          11111100


Q ss_pred             ecccCCCCchhchhhh--hcC---Ccccce-eEEeCH-HHHHHhhhccCCCCcccccCCCCC-cHHHHHHHHHHHHHHhh
Q 010250          326 CDKYSIKPDLVSFAKA--LSS---AYMPIG-AILVSP-EVSEVIHSQSNTLGSFSHGFTYSG-HPVSCAVAIEALKIYKE  397 (514)
Q Consensus       326 ~~~~gv~pDiv~~sK~--l~g---G~~pig-~v~~~~-~i~~~l~~~~~~~~~~~~~~t~~~-~pl~~aaa~aal~~~~~  397 (514)
                          .+.-.+.+++|+  |++   +..++| ++++++ ++++.++....   ......++++ ++.-+++...+|+...+
T Consensus       217 ----ei~~e~~s~sd~~~mS~~K~~~~~~GG~i~~~d~~l~~~~~~~~~---~~~~~~~~gG~~~r~~~A~A~gL~e~~~  289 (431)
T cd00617         217 ----EIAREMFSYADGCTMSAKKDGLVNIGGFLALRDDELYEEARQRVV---LYEGFVTYGGMAGRDMEALAQGLREAVE  289 (431)
T ss_pred             ----HHHHHhhccCCEEEEEeecCCCCccceEEEeCcHHHHHHHHHhcc---ccCCccccccccHHHHHHHHHHHHhccc
Confidence                000011234442  221   113455 677775 58888764210   0111123333 22223332225554222


Q ss_pred             ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHH-HHHHHCCcEEEee----
Q 010250          398 RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFG-AQCEKHGMLVRVS----  472 (514)
Q Consensus       398 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~Gv~~~~~----  472 (514)
                      .+..++..+..++|.+.|++. ..|++..  .-|.++.++...-.. .  .+.+.-.+..++ ..+.+.||.+...    
T Consensus       290 ~~~l~~~~~~r~~l~~~L~~~-G~~v~~P--~Ggh~v~~d~~~~~~-~--~~~~~~~~~~la~~L~~e~gV~~~~~g~~~  363 (431)
T cd00617         290 EDYLRHRVEQVRYLGDRLDEA-GVPIVEP--AGGHAVFIDAREFLP-H--IPQEQFPAQALAAELYLEAGVRAVELGIFS  363 (431)
T ss_pred             HHHHHHHHHHHHHHHHHHHHC-CCCccCC--CcceEEEEEhHHhcC-C--CCcccCcHHHHHHHHHHHcCeeEEeeccee
Confidence            233333333458888888876 4444432  234455555443110 0  000000234455 4455667775421    


Q ss_pred             -------C-------CEEEEeCCC-CCCHHHHHHHHHHHHHHHHH
Q 010250          473 -------G-------DNIMMSPPF-IMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       473 -------g-------~~iRi~p~~-~~t~e~id~~~~~l~~~l~~  502 (514)
                             +       +.+|++.|. ..|.+++|.+.+.|.+.+++
T Consensus       364 ~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~  408 (431)
T cd00617         364 AGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER  408 (431)
T ss_pred             cccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence                   1       459999886 67999999999999888765

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=99.61  E-value=2e-13  Score=141.45  Aligned_cols=344  Identities=13%  Similarity=0.063  Sum_probs=199.0

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCC-CeEEE--eCChhHHHHHHHHHHHHHHhh----c
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKM-AKVFF--TNSGSEANDTQVKLVWYYNNA----L  189 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~-~~v~~--~~sGseA~~~Alk~a~~~~~~----~  189 (514)
                      .+|++.+++.+.+..........+...+...+..+.++++++.... +++.|  ++||||||..|++.++.....    .
T Consensus        53 ~~p~~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~  132 (431)
T TIGR01788        53 MEPEARKLMDETINKNMIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAA  132 (431)
T ss_pred             CCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhc
Confidence            5889999998888643222111222335556677778888753212 35665  799999999999888643211    1


Q ss_pred             CCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250          190 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP  269 (514)
Q Consensus       190 ~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~  269 (514)
                      +.......|+.+..-|-+...+....+..            +..++....            -...+.++|++.+.    
T Consensus       133 g~~~~~~~ii~s~~~H~sv~ka~~~lg~~------------v~~i~~d~~------------~~~vd~~~L~~~i~----  184 (431)
T TIGR01788       133 GKPTDKPNLVMGSNVQVCWEKFARYFDVE------------LREVPMDPG------------RYVIDPEQVVEAVD----  184 (431)
T ss_pred             CCCCCCcEEEEcCcchHHHHHHHHHcCce------------eEEEecCCC------------ceeeCHHHHHHHHh----
Confidence            11111235666666666544333222211            111111100            00123577888775    


Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc------CCEEEEechhcCccc---ccc-cceecccCCCCchhchh
Q 010250          270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY------DILFIADEVICAFGR---LGT-MFGCDKYSIKPDLVSFA  339 (514)
Q Consensus       270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~------gillI~DEv~tG~gr---~G~-~~~~~~~gv~pDiv~~s  339 (514)
                      +++.+|++.-++++.|.+.|    +++|.++|++|      |+++++|-+|.|+-.   .++ .+.+.  ....|.++++
T Consensus       185 ~~t~lV~~t~g~t~tG~idp----i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~--~~~~DSis~s  258 (431)
T TIGR01788       185 ENTIGVVCILGTTYTGEYED----VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR--LPRVKSINVS  258 (431)
T ss_pred             hCCeEEEEEeCCCCCcccCC----HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC--CCCceEEEEC
Confidence            34678888889999999998    99999999999      999999999987421   222 11111  1235777776


Q ss_pred             --hhhcCCcccceeEEeCHH--HHHHhhhccCCCCcccccCCCCCc-H-HHHHHHHHHHHHHhh---ccHHHHHHHHHHH
Q 010250          340 --KALSSAYMPIGAILVSPE--VSEVIHSQSNTLGSFSHGFTYSGH-P-VSCAVAIEALKIYKE---RNIVEQVNKIAPK  410 (514)
Q Consensus       340 --K~l~gG~~pig~v~~~~~--i~~~l~~~~~~~~~~~~~~t~~~~-p-l~~aaa~aal~~~~~---~~~~~~~~~~~~~  410 (514)
                        |.+.+. ..+|+++.++.  +.+.+.....+.+.-....|..++ + .........|..+..   +++.++..++.++
T Consensus       259 ~HK~~~~P-~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~  337 (431)
T TIGR01788       259 GHKYGLVY-PGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARY  337 (431)
T ss_pred             chhccCCC-CCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Confidence              765455 67899988754  333332111111110001122222 2 122334444444433   3456777888889


Q ss_pred             HHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE----ee---CC-EEEEeCCC
Q 010250          411 FQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VS---GD-NIMMSPPF  482 (514)
Q Consensus       411 l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~---g~-~iRi~p~~  482 (514)
                      |.++|+++....++... ....++.|.+.+....      .. ....+.+.|.++|+.+.    |.   |. .+|++...
T Consensus       338 l~~~L~~~~~~el~~~~-~~~~iV~Fr~~~~~~~------~~-~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~~  409 (431)
T TIGR01788       338 LAEEIAKLGPFEIISDG-SGIPLVAFKLKDDADP------GY-TLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVRE  409 (431)
T ss_pred             HHHHHHhCCCEEEeeCC-CCceEEEEEeCCCCCC------Cc-CHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEecC
Confidence            99988876332222211 1344556666532110      01 13457889999998642    21   22 48988766


Q ss_pred             CCCHHHHHHHHHHHHHHHHHH
Q 010250          483 IMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       483 ~~t~e~id~~~~~l~~~l~~~  503 (514)
                      .++++.++++++.|+.++..+
T Consensus       410 ~~~~~~~~~~~~~~~~~~~~~  430 (431)
T TIGR01788       410 GFSRDLAELLIEDIEAALAYL  430 (431)
T ss_pred             CCCHHHHHHHHHHHHHHHHhh
Confidence            788999999999999988764

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>PRK02769 histidine decarboxylase; Provisional

Probab=99.59  E-value=1.1e-12  Score=134.24  Aligned_cols=294  Identities=18%  Similarity=0.143  Sum_probs=180.0

Q ss_pred             CchHHHHHHHHHHhcCcCCCC-eEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250          143 TKPSLDLAKELLEMFTASKMA-KVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH  221 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~-~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~  221 (514)
                      .+...+..+.++++++....+ ..+|+++|||||..|+..+|.+.     +  ...|+.+..-|.+...+...-+.... 
T Consensus        64 ~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~-----~--~~~ii~s~~~H~Sv~ka~~~lg~~~~-  135 (380)
T PRK02769         64 FDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELF-----P--DGTLYYSKDTHYSVSKIARLLRIKSR-  135 (380)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhC-----C--CcEEEeCCCceehHHHHHHHcCCCCc-
Confidence            344556777778887532222 25899999999999998887431     2  23455556666665433332222111 


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                                 .+++.+.             ...+.++|++++.+. ...+.+|++.-..++.|.+.|    +++|.++|
T Consensus       136 -----------~V~~~~~-------------g~id~~~L~~~i~~~-~~~t~lvv~t~gtt~tG~idp----i~~I~~i~  186 (380)
T PRK02769        136 -----------VITSLPN-------------GEIDYDDLISKIKEN-KNQPPIIFANIGTTMTGAIDN----IKEIQEIL  186 (380)
T ss_pred             -----------eeccCCC-------------CcCcHHHHHHHHHhC-CCCcEEEEEEeCCCCCcccCC----HHHHHHHH
Confidence                       1111100             112367888888754 235778888888999999988    99999999


Q ss_pred             HhcC---CEEEEechhcCccccccc---ceecccCCCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCccc
Q 010250          302 KKYD---ILFIADEVICAFGRLGTM---FGCDKYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS  373 (514)
Q Consensus       302 ~~~g---illI~DEv~tG~gr~G~~---~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~  373 (514)
                      ++||   +++++|-+|.|+ ..-..   ..++... ..|.++++  |.+++. .++|+++.+++..+.+.........  
T Consensus       187 ~~~g~~~~~lHVDaA~gg~-~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P-~g~G~l~~r~~~~~~~~~~~~yl~~--  261 (380)
T PRK02769        187 KKIGIDDYYIHADAALSGM-ILPFVNNPPPFSFAD-GIDSIAISGHKFIGSP-MPCGIVLAKKKYVERISVDVDYIGS--  261 (380)
T ss_pred             HHhCCCceEEEEEecccce-eecccCccccCCccC-CCCEEEECCcccCCCC-CCcEEEEEehhhhhhcccCccccCC--
Confidence            9998   699999999864 22100   0111111 46878776  766656 7899999998877665432111111  


Q ss_pred             ccCCCCCc--HHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCC
Q 010250          374 HGFTYSGH--PVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPF  448 (514)
Q Consensus       374 ~~~t~~~~--pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~  448 (514)
                      ...|..++  ..+.++..++|+.+..+   +..++..++.+++.++|++. +....  ......  .+.|....      
T Consensus       262 ~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~--~~p~~~--~v~f~~~~------  330 (380)
T PRK02769        262 RDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAW--RNPNSI--TVVFPCPS------  330 (380)
T ss_pred             CCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEE--cCCCce--EEEEcCCC------
Confidence            11233333  34556666777776654   35677888888898988764 22211  111222  22333211      


Q ss_pred             CCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          449 PPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       449 ~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                             ..+     .+|..+.+.++.+|+.....+|+|.||++++-|.+.+.
T Consensus       331 -------~~~-----~~~w~l~~~~~~~hi~~~~~~~~~~~~~f~~dl~~~~~  371 (380)
T PRK02769        331 -------ERI-----WKKWHLATSGNQAHIITMPHHNKQQIDSLIDELIFDLK  371 (380)
T ss_pred             -------HHH-----HhCeeEcccCCEEEEEECCCCCHHHHHHHHHHHHHHHh
Confidence                   011     15666666666788888888899999999998887764

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.59  E-value=8.6e-14  Score=142.02  Aligned_cols=303  Identities=16%  Similarity=0.102  Sum_probs=168.5

Q ss_pred             CCCCCHHHHHHHHHHHhcCC-cccc-cc--c-cCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhh
Q 010250          114 LGGSEPRLVAAATAQLNTLP-FYHS-FW--N-RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA  188 (514)
Q Consensus       114 lGh~~p~v~~A~~~~l~~~~-~~~~-~~--~-~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~  188 (514)
                      .|.-++.|++|+.+.+.... ..+. ..  + ...+...++.+++++++. .+.+.++|++|+++|++.+++......  
T Consensus         7 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g-~~~~~v~~~~g~t~a~~~~l~~l~~~~--   83 (353)
T TIGR03235         7 TTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALG-ADTEEVIFTSGATESNNLAILGLARAG--   83 (353)
T ss_pred             CCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhC-CCCCeEEEeCCHHHHHHHHHHHHHHhc--
Confidence            34568999999998875421 1111 00  0 112345678888998874 345789999999999999987664220  


Q ss_pred             cCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC
Q 010250          189 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG  268 (514)
Q Consensus       189 ~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~  268 (514)
                       ..++++.||+. ...|.+..........      .+   ..+..++.+..+             ..+.+++++.+.   
T Consensus        84 -~~~g~~~vi~~-~~~~~s~~~~~~~~~~------~G---~~v~~v~~~~~~-------------~~d~~~l~~~l~---  136 (353)
T TIGR03235        84 -EQKGKKHIITS-AIEHPAVLEPIRALER------NG---FTVTYLPVDESG-------------RIDVDELADAIR---  136 (353)
T ss_pred             -ccCCCCeeeEc-ccccHHHHHHHHHHHh------cC---CEEEEEccCCCC-------------cCCHHHHHHhCC---
Confidence             11233445554 4444432211111000      00   001111111100             112466766663   


Q ss_pred             CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCc
Q 010250          269 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAY  346 (514)
Q Consensus       269 ~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~  346 (514)
                       +++.+|++..+++.+|.+.|    +++|.++|++||+++|+|++|+ +|..  .  .+......|+++++  |.+ |. 
T Consensus       137 -~~~~lv~~~~~~n~tG~~~~----~~~I~~l~~~~~~~~ivD~a~~-~g~~--~--~~~~~~~~D~~~~s~~K~~-gp-  204 (353)
T TIGR03235       137 -PDTLLVSIMHVNNETGSIQP----IREIAEVLEAHEAFFHVDAAQV-VGKI--T--VDLSADRIDLISCSGHKIY-GP-  204 (353)
T ss_pred             -CCCEEEEEEcccCCceeccC----HHHHHHHHHHcCCEEEEEchhh-cCCc--c--ccccccCCCEEEeehhhcC-CC-
Confidence             35678888889999999987    8999999999999999999997 5443  1  22222346888766  964 32 


Q ss_pred             ccceeEEeCHHHHHHhhhccCCCC-ccccc-CCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhhhhhccCCC
Q 010250          347 MPIGAILVSPEVSEVIHSQSNTLG-SFSHG-FTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVKAFSDSP  422 (514)
Q Consensus       347 ~pig~v~~~~~i~~~l~~~~~~~~-~~~~~-~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~  422 (514)
                      ..+|+++++++............+ ..... .....++...++..++++.+.+  ++..++++++.++++++|++. +..
T Consensus       205 ~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~-g~~  283 (353)
T TIGR03235       205 KGIGALVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTL-GVK  283 (353)
T ss_pred             CceEEEEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccC-CeE
Confidence            347899998875322110000000 00000 1123345555666677776643  356788888888998888763 222


Q ss_pred             ceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee
Q 010250          423 IIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS  472 (514)
Q Consensus       423 ~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~  472 (514)
                      +.... .....+..+.+...            ..+.+...|. +||.++++
T Consensus       284 ~~~~~~~~~~~i~~~~~~~~------------~~~~v~~~L~-~~i~v~~g  321 (353)
T TIGR03235       284 LNGDPAETIPHILNFSIDGV------------NSEALIVNLR-ADAAVSTG  321 (353)
T ss_pred             EeCCcccccCCEEEEEeCCc------------CHHHHHHHHh-CCeEEEch
Confidence            22111 11223444443211            1345666775 48888754

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>PLN02368 alanine transaminase

Probab=99.59  E-value=1.4e-13  Score=142.32  Aligned_cols=249  Identities=15%  Similarity=0.096  Sum_probs=151.8

Q ss_pred             chHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          144 KPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       144 ~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      +....+++.+.+..+ ....++|++++|+++|+..++....      . ..++.|++.+++|..........++...   
T Consensus       111 ~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~------~-~pGd~Vli~~P~Y~~y~~~~~~~g~~~v---  180 (407)
T PLN02368        111 GVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVI------R-GEKDGVLVPVPQYPLYSATISLLGGTLV---  180 (407)
T ss_pred             HHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHc------C-CCCCEEEEeCCCCccHHHHHHHcCCEEE---
Confidence            444455555544322 1356799999999999999887652      1 2357899999999987544333322211   


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC---CCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG---PETIAAFIAEPVIGAGGVIPPPATYFEKVQA  299 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~---~~~~aavivEpv~~~~G~~~p~~~~L~~l~~  299 (514)
                                .+++...          +.| ..++++|++.+....   .+..+.+++.| +|.+|.+ .+++.+++|.+
T Consensus       181 ----------~v~~~~~----------~~~-~~d~~~le~~i~~~~~~~~~~k~l~l~nP-~NPTG~v-~s~e~l~~l~~  237 (407)
T PLN02368        181 ----------PYYLEES----------ENW-GLDVNNLRQSVAQARSKGITVRAMVIINP-GNPTGQC-LSEANLREILK  237 (407)
T ss_pred             ----------EEecccc----------cCC-CCCHHHHHHHHHHHhhcCCCeEEEEEECC-CCCCCcc-CCHHHHHHHHH
Confidence                      0111000          000 012477777765321   12234666777 5556654 46789999999


Q ss_pred             HHHhcCCEEEEechhcCcccccc-cc-ee-ccc-CCC------Cchh---chhhhhc-CCcccceeEEe---CHHHHHHh
Q 010250          300 VVKKYDILFIADEVICAFGRLGT-MF-GC-DKY-SIK------PDLV---SFAKALS-SAYMPIGAILV---SPEVSEVI  362 (514)
Q Consensus       300 l~~~~gillI~DEv~tG~gr~G~-~~-~~-~~~-gv~------pDiv---~~sK~l~-gG~~pig~v~~---~~~i~~~l  362 (514)
                      +|++||+++|.||+|..+...|. .+ .. +.. ++.      +.++   +|||.+. -.++++|++++   ++++++.+
T Consensus       238 ~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~  317 (407)
T PLN02368        238 FCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEI  317 (407)
T ss_pred             HHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHH
Confidence            99999999999999998754442 11 11 110 111      1333   5799873 22299999984   88888888


Q ss_pred             hhccCCCCcccccCCCCCcHHHHHHHHHHHHH-----------Hhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEee
Q 010250          363 HSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI-----------YKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT  430 (514)
Q Consensus       363 ~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~-----------~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~  430 (514)
                      ...        ...+++.+.+++.++.++|+.           .++ +++.+.++++++.+.+.|+++   +.+......
T Consensus       318 ~~~--------~~~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~---~g~~~~~P~  386 (407)
T PLN02368        318 YKV--------ASIALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSC---KNVVCNFTE  386 (407)
T ss_pred             HHH--------hcccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCeEeCCCC
Confidence            641        123456777888888888752           111 235677788888888888876   334344456


Q ss_pred             eeeEEE
Q 010250          431 GLILGT  436 (514)
Q Consensus       431 g~~~~i  436 (514)
                      |.|+.+
T Consensus       387 Gafy~~  392 (407)
T PLN02368        387 GAMYSF  392 (407)
T ss_pred             eeeEec
Confidence            665543

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.57  E-value=1.3e-13  Score=142.26  Aligned_cols=235  Identities=17%  Similarity=0.148  Sum_probs=151.1

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP  218 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~  218 (514)
                      ..+...+++++|+++.+   .+.++.++||++|+..++....        ..+++||+..+.|++.....   +...|..
T Consensus        62 ~~p~~~~le~~lA~l~g---~~~~i~~ssG~~Ai~~~l~all--------~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~  130 (398)
T PRK08249         62 TNPTVQAFEEKVRILEG---AEAATAFSTGMAAISNTLYTFL--------KPGDRVVSIKDTYGGTNKIFTEFLPRMGVD  130 (398)
T ss_pred             CChHHHHHHHHHHHHhC---CCeEEEeCChHHHHHHHHHHhc--------CCCCEEEEcCCchHHHHHHHHHHHhhCCeE
Confidence            34556889999999873   4578999999999999987553        23568999999997642110   1111110


Q ss_pred             cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ  298 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~  298 (514)
                      .            ..++.                  .+.+++++++.    +++++|++|.+.+..|.+.+    +++|.
T Consensus       131 v------------~~vd~------------------~d~e~l~~~i~----~~tklV~ie~p~NPtg~v~d----l~~I~  172 (398)
T PRK08249        131 V------------TLCET------------------GDHEQIEAEIA----KGCDLLYLETPTNPTLKIVD----IERLA  172 (398)
T ss_pred             E------------EEcCC------------------CCHHHHHHhcC----CCCeEEEEECCCCCCCccCC----HHHHH
Confidence            0            00110                  01456666664    35678888888888898887    99999


Q ss_pred             HHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccc-eeEEeCHHHHHHhhhccCCCCccccc
Q 010250          299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPI-GAILVSPEVSEVIHSQSNTLGSFSHG  375 (514)
Q Consensus       299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pi-g~v~~~~~i~~~l~~~~~~~~~~~~~  375 (514)
                      ++|++||+++|+|+++..+ ..+.     ......|++  +++|.++|..-.+ |++++++++++.+...       ...
T Consensus       173 ~la~~~gi~livD~t~a~~-~~~~-----~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~-------~~~  239 (398)
T PRK08249        173 AAAKKVGALVVVDNTFATP-INQN-----PLALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHY-------REI  239 (398)
T ss_pred             HHHHHcCCEEEEECCcCcc-ccCC-----chhhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHH-------HHh
Confidence            9999999999999998733 1111     112245666  4679998732344 5666788888877532       112


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250          376 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD  440 (514)
Q Consensus       376 ~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~  440 (514)
                      .....+|..++.++..++.+..  ..++..++...+.+.|++..     .+|...          ...|.|.++.|++..
T Consensus       240 ~g~~~s~~~a~l~l~~l~tL~~--R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~  317 (398)
T PRK08249        240 NGATMDPMSAYLILRGMKTLKL--RVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKG  317 (398)
T ss_pred             cCCCCCHHHHHHHHhCcchHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcC
Confidence            3445678888888877776642  34556667777777776531     123221          124678899999863

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.57  E-value=1.7e-12  Score=133.62  Aligned_cols=313  Identities=13%  Similarity=0.142  Sum_probs=180.2

Q ss_pred             HHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEE
Q 010250          119 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI  198 (514)
Q Consensus       119 p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii  198 (514)
                      ++-.+++.+.++....+      ..+...+|+++++++++   .+.+++++||++|+..+++...      . ..+++||
T Consensus        14 ~~e~~~~~~~l~~~~~~------~g~~~~~le~~la~~~g---~~~~v~~~sgt~al~lal~al~------~-~~Gd~Vi   77 (379)
T PRK11658         14 DEELAAVKEVLRSGWIT------TGPKNQALEQAFCQLTG---NQHAIAVSSATAGMHITLMALG------I-GPGDEVI   77 (379)
T ss_pred             HHHHHHHHHHHHcCCcc------CCHhHHHHHHHHHHHhC---CCeEEEECCHHHHHHHHHHHcC------C-CCCCEEE
Confidence            55677888877654322      22446889999999873   4578999999999999997651      1 3356899


Q ss_pred             EEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEE
Q 010250          199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIA  277 (514)
Q Consensus       199 ~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aaviv  277 (514)
                      +.+..|.+....... .|...            ..++.. +.|.             .+.+++++.+.    +++.+|+ 
T Consensus        78 v~~~~~~~~~~~~~~-~G~~~------------v~vd~~~~~~~-------------~d~~~l~~~i~----~~tkav~-  126 (379)
T PRK11658         78 TPSLTWVSTLNMIVL-LGATP------------VMVDVDRDTLM-------------VTPEAIEAAIT----PRTKAII-  126 (379)
T ss_pred             ECCCcHHHHHHHHHH-cCCEE------------EEEecCCCcCC-------------cCHHHHHHhcc----cCCeEEE-
Confidence            988888775432222 12111            111110 0000             12467777664    2455555 


Q ss_pred             ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhchh--hhhcCCcccceeEEe
Q 010250          278 EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILV  354 (514)
Q Consensus       278 Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~  354 (514)
                       |++. .|...+    +++|.++|++||+++|+|++|+ |.-..|..  ...+|+  ++.+|+  |.|++|  ..|+++.
T Consensus       127 -~~~~-~G~~~d----~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~--~g~~g~--~~~Sf~~~K~l~~g--~GG~v~~  194 (379)
T PRK11658        127 -PVHY-AGAPAD----LDAIRAIGERYGIPVIEDAAHAVGTYYKGRH--IGARGT--AIFSFHAIKNITCA--EGGLVVT  194 (379)
T ss_pred             -EeCC-CCCcCC----HHHHHHHHHHcCCeEEEECCCccCCeECCee--cCCCCC--EEEeCCCCCcCccc--CceEEEE
Confidence             3333 465555    8999999999999999999998 33222221  122333  566666  788764  5666776


Q ss_pred             C-HHHHHHhhhc---cCCCC--------------cccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhh
Q 010250          355 S-PEVSEVIHSQ---SNTLG--------------SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK  416 (514)
Q Consensus       355 ~-~~i~~~l~~~---~~~~~--------------~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~  416 (514)
                      + +++.+.+...   +....              .+..|+.+..+.+.++.++..++.++  ++.++-+++.+++.+.|+
T Consensus       195 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~--~~~~~r~~~a~~~~~~L~  272 (379)
T PRK11658        195 DDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLE--ALNARRREIAARYLQALA  272 (379)
T ss_pred             CCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhc
Confidence            4 7777666431   10000              01123334445666666666666543  456777778888888887


Q ss_pred             hccCCCce--eE-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------------------
Q 010250          417 AFSDSPII--GE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---------------------  472 (514)
Q Consensus       417 ~l~~~~~~--~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------------------  472 (514)
                      ++....+.  .. ....-.++.+.+.......        ..+.+.+.|.++||-++..                     
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~  344 (379)
T PRK11658        273 DLPFQPLSLPAWPHQHAWHLFIIRVDEERCGI--------SRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPN  344 (379)
T ss_pred             CCCCccCcCCCCCCceeEEEEEEEECCccccC--------CHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChH
Confidence            65211111  10 0111122334443211000        1456788899999876510                     


Q ss_pred             -----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          473 -----GDNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       473 -----g~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                           ...|.+-.....|++|++.+++.|++++
T Consensus       345 ~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~  377 (379)
T PRK11658        345 TEWNSERICSLPLFPDMTDADVDRVITALQQIA  377 (379)
T ss_pred             HHHHHhCeEEccCCCCCCHHHHHHHHHHHHHHH
Confidence                 0223333335689999999999998865

>PRK07049 methionine gamma-lyase; Validated

Probab=99.57  E-value=1.4e-13  Score=143.13  Aligned_cols=239  Identities=14%  Similarity=0.096  Sum_probs=152.8

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee---ecCCCcc
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLPA  219 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~---~~s~~~~  219 (514)
                      ++....|++.|+++.+   .+.+++++||++|+..++....        ..++.|++.++.|.+......   ...|...
T Consensus        82 ~Pt~~~Le~~lA~leg---~~~~iv~~sG~~Ai~~~l~al~--------~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~  150 (427)
T PRK07049         82 HPNSEIVEDRLAVYEG---AESAALFSSGMSAIATTLLAFV--------RPGDVILHSQPLYGGTETLLAKTFRNFGVGA  150 (427)
T ss_pred             CcCHHHHHHHHHHHhC---CCcEEEEccHHHHHHHHHHHHh--------CCCCEEEEcCCCcccHHHHHHHHHHhcCcEE
Confidence            4456789999999873   4579999999999998887654        345689999999988632211   1111110


Q ss_pred             ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh-CCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250          220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQ  298 (514)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~-~~~~~aavivEpv~~~~G~~~p~~~~L~~l~  298 (514)
                                    +.+++       ..        +.+++++.+.+. ..+++.+|++|..+|++|.+.+    +++|.
T Consensus       151 --------------v~~~~-------~~--------d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d----~~~l~  197 (427)
T PRK07049        151 --------------VGFAD-------GL--------SEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVD----VAAVR  197 (427)
T ss_pred             --------------EEEeC-------CC--------CHHHHHHHHHhhccCCCceEEEEECCCCCCCcccC----HHHHH
Confidence                          00110       00        024555555432 1235788999988888898876    67777


Q ss_pred             HHHHh------cCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcC-CcccceeEEeCHHHHHHhhhccCCC
Q 010250          299 AVVKK------YDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSS-AYMPIGAILVSPEVSEVIHSQSNTL  369 (514)
Q Consensus       299 ~l~~~------~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~g-G~~pig~v~~~~~i~~~l~~~~~~~  369 (514)
                      +++++      +++++|+||++.++....   ..   ....|++  +++|.++| +.+++|++++++++++.+...    
T Consensus       198 ~la~~~~~~~~~~~~vvvDety~~~~~~~---pl---~~g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~----  267 (427)
T PRK07049        198 RVADAIEARQGHRPIIACDNTLLGPVFQK---PL---EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRAL----  267 (427)
T ss_pred             HHHHHhhhcccCCCEEEEECCccccccCC---cc---ccCCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHH----
Confidence            77766      899999999976442111   11   1124666  68899995 448999999999988877631    


Q ss_pred             CcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCce--e----------EEEeeee
Q 010250          370 GSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPII--G----------EIRGTGL  432 (514)
Q Consensus       370 ~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~--~----------~v~g~g~  432 (514)
                         ........+|..+.+++..|+.+..  ..++..++++.+.+.|++..     .+|..  .          ...|.|.
T Consensus       268 ---~~~~g~~ls~~~a~l~~r~L~tl~~--R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~  342 (427)
T PRK07049        268 ---RSAIGTQLDPHSCWMLGRSLETLVL--RMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGS  342 (427)
T ss_pred             ---HHhcCCCCCHHHHHHHHcCCChHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCcc
Confidence               1112344678888888777765532  24555777777777777542     12311  0          1246688


Q ss_pred             eEEEEEcc
Q 010250          433 ILGTEFAD  440 (514)
Q Consensus       433 ~~~i~~~~  440 (514)
                      ++.|++..
T Consensus       343 ~~s~~~~~  350 (427)
T PRK07049        343 TFSFDIKG  350 (427)
T ss_pred             EEEEEEcC
Confidence            99999863

>PLN03032 serine decarboxylase; Provisional

Probab=99.56  E-value=1.9e-12  Score=131.46  Aligned_cols=317  Identities=13%  Similarity=0.091  Sum_probs=187.7

Q ss_pred             CHHHHHHHHHHHhc-CCcccccc--c-cCCchHHHHHHHHHHhcCcCCCCeE--EEeCChhHHHHHHHHHHHHHHhhcCC
Q 010250          118 EPRLVAAATAQLNT-LPFYHSFW--N-RTTKPSLDLAKELLEMFTASKMAKV--FFTNSGSEANDTQVKLVWYYNNALGR  191 (514)
Q Consensus       118 ~p~v~~A~~~~l~~-~~~~~~~~--~-~~~~~~~ela~~L~~~~~~~~~~~v--~~~~sGseA~~~Alk~a~~~~~~~~~  191 (514)
                      ++.+++++.+.+.+ .+...++.  + ...+...+..+.++++++. +.+.+  +|++||||||..|+..+|.+.     
T Consensus        36 ~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~-~~~~~~G~fTsGGTEaNl~al~~ar~~~-----  109 (374)
T PLN03032         36 DYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEL-EKDEYWGYITTCGTEGNLHGILVGREVF-----  109 (374)
T ss_pred             ChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCC-CCccCCEEEeCchHHHHHHHHHHHHHhC-----
Confidence            45677777777653 22111111  1 2344555677778888753 33444  999999999999999887541     


Q ss_pred             CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCc
Q 010250          192 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPET  271 (514)
Q Consensus       192 ~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~  271 (514)
                      + + .+++.+..-|-+...+....+...            ..++....             ...++++|++.+.+.. ..
T Consensus       110 ~-~-~~vi~s~~~H~Sv~kaa~~lg~~~------------~~V~~d~~-------------g~id~~~L~~~i~~~~-~~  161 (374)
T PLN03032        110 P-D-GILYASRESHYSVFKAARMYRMEA------------VKVPTLPS-------------GEIDYDDLERALAKNR-DK  161 (374)
T ss_pred             C-C-cEEEeCCCceeHHHHHHHHcCCCC------------eEeeeCCC-------------CcCcHHHHHHHHHHcC-CC
Confidence            1 1 366777777776554443332211            11222111             1233688888886532 24


Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHhcC-----CEEEEechhcCcccccccceec--ccCCCCchhchh--hhh
Q 010250          272 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD-----ILFIADEVICAFGRLGTMFGCD--KYSIKPDLVSFA--KAL  342 (514)
Q Consensus       272 ~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g-----illI~DEv~tG~gr~G~~~~~~--~~gv~pDiv~~s--K~l  342 (514)
                      +.+|++.-.+++.|.+.|    +++|.++|++||     +++++|-+|.|+ ..-..-...  .+....|.++++  |.+
T Consensus       162 ~~lvv~tagtt~tG~idp----i~eI~~i~~~~g~~~~~~~lHvDaA~gg~-~~p~~~~~~~~~~~~~vDSis~s~HK~~  236 (374)
T PLN03032        162 PAILNVNIGTTVKGAVDD----LDRILRILKELGYTEDRFYIHCDGALFGL-MMPFVSRAPEVTFRKPIGSVSVSGHKFL  236 (374)
T ss_pred             CEEEEEEecCcCCccCCC----HHHHHHHHHHhCCCCCCeeEEEEccchhh-hhhccCCCcccCCCcCCcEEEECccccc
Confidence            667777778888999988    999999999997     489999999754 221000000  011236777776  655


Q ss_pred             cCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCc--HHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHhhhhh
Q 010250          343 SSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH--PVSCAVAIEALKIYKERN---IVEQVNKIAPKFQDGVKA  417 (514)
Q Consensus       343 ~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~--pl~~aaa~aal~~~~~~~---~~~~~~~~~~~l~~~L~~  417 (514)
                      +.. .++|+++.+++.++.+.....+...  ...|..++  ....+...++|+.+-.++   ..++.-++.+++.+.|++
T Consensus       237 g~P-~g~G~ll~r~~~~~~~~~~~~Yl~~--~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~  313 (374)
T PLN03032        237 GCP-MPCGVALTRKKHVKALSQNVEYLNS--RDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTE  313 (374)
T ss_pred             CCC-cCeEEEEEEchhhHhhccCCcccCC--CCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            445 7889999998877666432222211  11234333  344556667777766554   466777788888888877


Q ss_pred             ccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHH
Q 010250          418 FSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYG  497 (514)
Q Consensus       418 l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~  497 (514)
                      . .....  .....+  .+.|..+.            .    .. ..+|..+.+..+.+++.....++++.||++++-|+
T Consensus       314 ~-~~~~~--~~p~~~--~V~f~~~~------------~----~~-~~~~w~l~~~~~~~hi~vm~~~~~~~id~fi~dl~  371 (374)
T PLN03032        314 A-GLTCR--LNELSS--TVVFERPM------------D----EA-FIKKWQLACEGDIAHVVVMPNVTVEKLDEFVEELV  371 (374)
T ss_pred             C-CCcEE--ECCCce--EEEEcCCC------------c----Hh-HhheeeecccCCEEEEEECCCCCHHHHHHHHHHHh
Confidence            5 22211  111222  23333221            0    11 22465555555678877777788999999998776


Q ss_pred             H
Q 010250          498 K  498 (514)
Q Consensus       498 ~  498 (514)
                      +
T Consensus       372 ~  372 (374)
T PLN03032        372 E  372 (374)
T ss_pred             c
Confidence            4

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.56  E-value=2.2e-13  Score=140.83  Aligned_cols=237  Identities=13%  Similarity=0.119  Sum_probs=148.0

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP  218 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~  218 (514)
                      +.+...+|+++|+++.+   .+.+++++||++|+..++....        ...++||+..+.|.+.....   +...|..
T Consensus        62 ~~p~~~~Le~~iA~~~g---~~~~l~~~sG~~Ai~~al~~ll--------~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~  130 (400)
T PRK06234         62 GNPTSTEVENKLALLEG---GEAAVVAASGMGAISSSLWSAL--------KAGDHVVASDTLYGCTFALLNHGLTRYGVE  130 (400)
T ss_pred             CCccHHHHHHHHHHHhC---CCcEEEEcCHHHHHHHHHHHHh--------CCCCEEEEecCccchHHHHHHHHHhhCCeE
Confidence            34556899999999974   3578999999999988886543        23457888777664432111   1111111


Q ss_pred             cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ  298 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~  298 (514)
                      .            ..++..                  +++++++.+.    +++.+|++|.+++.+|.+.+    +++|.
T Consensus       131 v------------~~vd~~------------------d~e~l~~~i~----~~tklI~iesP~NPtG~v~d----l~~I~  172 (400)
T PRK06234        131 V------------TFVDTS------------------NLEEVRNALK----ANTKVVYLETPANPTLKVTD----IKAIS  172 (400)
T ss_pred             E------------EEECCC------------------CHHHHHHHhc----cCCeEEEEECCCCCCCCcCC----HHHHH
Confidence            0            001100                  1466776664    35678888888888898877    99999


Q ss_pred             HHHHhc--CCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccc-eeEEeCHHHHHHhhhccCCCCccc
Q 010250          299 AVVKKY--DILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPI-GAILVSPEVSEVIHSQSNTLGSFS  373 (514)
Q Consensus       299 ~l~~~~--gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pi-g~v~~~~~i~~~l~~~~~~~~~~~  373 (514)
                      ++|+++  |+++|+||++... ..+..     .+...|++  +++|.++|.+.++ |++++++++++.+....     ..
T Consensus       173 ~la~~~~~~i~livDea~~~~-~~~~~-----l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~-----~~  241 (400)
T PRK06234        173 NIAHENNKECLVFVDNTFCTP-YIQRP-----LQLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFG-----IK  241 (400)
T ss_pred             HHHHhcCCCCEEEEECCCCch-hcCCc-----hhhCCcEEEeeccccccCCCCceeEEEEecHHHHHHHHHHH-----HH
Confidence            999997  9999999998732 22221     12245766  4679998744555 78888998888775311     01


Q ss_pred             ccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEE
Q 010250          374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEF  438 (514)
Q Consensus       374 ~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~  438 (514)
                      ...+...+|..++.++..|+.+..  ..++..++..++.+.|++..     .+|...          ...+.|.++.|++
T Consensus       242 ~~~g~~l~p~~a~l~~~~l~tl~~--r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l  319 (400)
T PRK06234        242 DMTGSVIGPFEAFLIIRGMKTLQI--RMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFEL  319 (400)
T ss_pred             HhcCCCCCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEe
Confidence            112345678888888777765432  34455566666666665421     122111          1235677888888


Q ss_pred             cc
Q 010250          439 AD  440 (514)
Q Consensus       439 ~~  440 (514)
                      ..
T Consensus       320 ~~  321 (400)
T PRK06234        320 KG  321 (400)
T ss_pred             cC
Confidence            63

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.56  E-value=1.4e-12  Score=137.45  Aligned_cols=286  Identities=14%  Similarity=0.152  Sum_probs=162.0

Q ss_pred             HHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec----CCCcccc
Q 010250          146 SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL----SGLPALH  221 (514)
Q Consensus       146 ~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~----s~~~~~~  221 (514)
                      ..++.+.++++++ .+.+++.++++|++++++++...+ .      .++++|++.++.| ++....+..    .|...  
T Consensus       114 ~~e~~~~la~l~g-~~~~~v~~~~g~t~~~~~~~~a~~-~------~~g~~Vlv~~~~~-~~~~~~~~~~~~~~G~~~--  182 (447)
T PRK00451        114 IFEYQTMICELTG-MDVANASMYDGATALAEAALMAVR-I------TKRKKVLVSGAVH-PEYREVLKTYLKGQGIEV--  182 (447)
T ss_pred             HHHHHHHHHHHhC-CCcceEEecCcHHHHHHHHHHHHH-h------cCCCEEEEeCccC-HHHHHHHHHHHHhCCcEE--
Confidence            3445566788774 345689999999998887775442 1      2345777766544 433222111    11111  


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                                ..++....              ..+.+++++.+.    +++++|++... +..|.+.|    +++|.++|
T Consensus       183 ----------~~v~~~~~--------------~~d~~~l~~~i~----~~t~~v~l~~p-n~tG~v~~----l~~I~~~a  229 (447)
T PRK00451        183 ----------VEVPYEDG--------------VTDLEALEAAVD----DDTAAVVVQYP-NFFGVIED----LEEIAEIA  229 (447)
T ss_pred             ----------EEecCCCC--------------CCCHHHHHHhcC----CCeEEEEEECC-CCCCeeCC----HHHHHHHH
Confidence                      11111100              112467777664    35667776654 56788876    99999999


Q ss_pred             HhcCCEEEE--echhcCcccccccceecccCCCCchhch-----hhhhcCCcccceeEEeCHHHHHHhhhc---------
Q 010250          302 KKYDILFIA--DEVICAFGRLGTMFGCDKYSIKPDLVSF-----AKALSSAYMPIGAILVSPEVSEVIHSQ---------  365 (514)
Q Consensus       302 ~~~gillI~--DEv~tG~gr~G~~~~~~~~gv~pDiv~~-----sK~l~gG~~pig~v~~~~~i~~~l~~~---------  365 (514)
                      +++|+++|+  |.+..|+  ..   ...  ....|++++     ||.+.-|++.+|++++++++++.+...         
T Consensus       230 ~~~~~~~iv~~d~~~~g~--~~---~~~--~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~  302 (447)
T PRK00451        230 HAGGALFIVGVDPVSLGL--LK---PPG--EYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDAD  302 (447)
T ss_pred             HHCCCEEEEEcChHHhcc--CC---Ccc--cCCCCEEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccC
Confidence            999999998  6553222  11   111  234577654     454332226789999999888875210         


Q ss_pred             c-----------CCCCcccccCCC-CCc-HHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEe
Q 010250          366 S-----------NTLGSFSHGFTY-SGH-PVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG  429 (514)
Q Consensus       366 ~-----------~~~~~~~~~~t~-~~~-pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g  429 (514)
                      .           .....+.++... +.+ ++...++.++++.+.+   ++..+++.++++++.++|+++..   +...  
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g---~~~~--  377 (447)
T PRK00451        303 GKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGG---VELF--  377 (447)
T ss_pred             CCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCC---EEec--
Confidence            0           000011121111 221 1222233334443332   34577888888999998887621   2111  


Q ss_pred             eeeeE---EEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE----ee----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250          430 TGLIL---GTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VS----GDNIMMSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       430 ~g~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~----g~~iRi~p~~~~t~e~id~~~~~l~~  498 (514)
                      .+.++   .+.+.  .           ....+.++|.++|+.+.    +.    .+.+|++++..+|++||+++++.|++
T Consensus       378 ~~~~~~~~~v~~~--~-----------~~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~  444 (447)
T PRK00451        378 DGPFFNEFVVRLP--K-----------PAEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVTEKRTKEDIDALVAALGE  444 (447)
T ss_pred             CCCeEEEEEEecC--C-----------CHHHHHHHHHhcCCCCCcccccccCCcCCEEEEecCCCCCHHHHHHHHHHHHH
Confidence            12221   13321  0           13468889999987742    21    24799999888999999999999987


Q ss_pred             HH
Q 010250          499 AL  500 (514)
Q Consensus       499 ~l  500 (514)
                      .+
T Consensus       445 ~~  446 (447)
T PRK00451        445 VL  446 (447)
T ss_pred             Hh
Confidence            54

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.56  E-value=2.9e-13  Score=139.47  Aligned_cols=238  Identities=15%  Similarity=0.099  Sum_probs=147.1

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      .+...+|+++|+++++   .+.+++++||+.|+..++....        ..++.||+..+.|.+.........      .
T Consensus        58 ~p~~~~le~~lA~l~g---~~~av~~~sG~~Ai~~~l~al~--------~~Gd~Vi~~~~~y~~t~~~~~~~~------~  120 (391)
T TIGR01328        58 NPTVSNLEGRIAFLEG---TEAAVATSSGMGAIAATLLTIL--------KAGDHLISDECLYGCTFALLEHAL------T  120 (391)
T ss_pred             CchHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEecCcchHHHHHHHHHH------h
Confidence            4556889999999973   4568999999999998886553        234678887776644321110000      0


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++.   .+..++..                  +.+++++.+.    +++.+|++|.++++.|.+.+    +++|.++|+
T Consensus       121 ~~G~---~~~~vd~~------------------d~e~l~~~i~----~~tklV~le~p~Np~G~v~d----l~~I~~la~  171 (391)
T TIGR01328       121 KFGI---QVDFINMA------------------IPEEVKAHIK----DNTKIVYFETPANPTMKLID----MERVCRDAH  171 (391)
T ss_pred             cCCe---EEEEECCC------------------CHHHHHHhhc----cCCeEEEEECCCCCCCcccC----HHHHHHHHH
Confidence            0110   01111110                  1356666553    35678889988888888876    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCccc-ceeEEeCHHHHHHhhhccCCCCcccccCCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMP-IGAILVSPEVSEVIHSQSNTLGSFSHGFTYS  379 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~p-ig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~  379 (514)
                      ++|+++|+||++. .+..+..     .+...|++  +++|.++|.+.+ .|++++++++++.+....    . ....+..
T Consensus       172 ~~gi~livD~a~a-~~~~~~~-----~~~g~Divv~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~----~-~~~~g~~  240 (391)
T TIGR01328       172 SQGVKVIVDNTFA-TPMLTNP-----VALGVDVVVHSATKYIGGHGDVVAGLICGKAELLQQIRMVG----I-KDMTGSV  240 (391)
T ss_pred             HcCCEEEEECCCc-hhccCCc-----hhcCCCEEEccccccccCCCCceEEEEEcCHHHHHHHHHHH----H-HhCCCCC
Confidence            9999999999986 3222221     22345766  466999873345 466778888887776311    0 1011234


Q ss_pred             CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCcee----------EEEeeeeeEEEEEc
Q 010250          380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFA  439 (514)
Q Consensus       380 ~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~v~g~g~~~~i~~~  439 (514)
                      .+|..++.++..|+.+..  ..++..++.+.+.+.|++...     +|...          ..++.|.++.|++.
T Consensus       241 l~~~~a~l~l~~L~tl~~--r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~  313 (391)
T TIGR01328       241 ISPFDAWLILRGLKTLNI--RMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELK  313 (391)
T ss_pred             CCcHHHHHHHhCcCcHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeC
Confidence            567777777776665432  356667777777777765421     22111          13466889999986

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PRK06460 hypothetical protein; Provisional

Probab=99.55  E-value=3.6e-13  Score=138.18  Aligned_cols=235  Identities=16%  Similarity=0.152  Sum_probs=142.9

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccce---eeeecCCCc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL---IAASLSGLP  218 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~---~~~~~s~~~  218 (514)
                      ..+...+|+++++++.+.   +..+.++||++|+..++....        ..+++||+..+.|.+...   ..+...|..
T Consensus        43 ~~p~~~~L~~~lA~l~g~---~~~v~~~sG~~ai~~~l~al~--------~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~  111 (376)
T PRK06460         43 ANPTVLELTKKIVELENA---EMGVAFSSGMGAISTTALALL--------KPGNSVLVHRDMFGRSYRFFTDYLKNWGVN  111 (376)
T ss_pred             CCccHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHHh--------CCCCEEEEecCCcCcHHHHHHHHHHhhCcE
Confidence            345578899999998742   345666889999988887553        234678877665533210   001111111


Q ss_pred             cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ  298 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~  298 (514)
                                  +..++.          .+        .+.+++++    .+++.+|++|.++++.|.+.+    +++|.
T Consensus       112 ------------v~~~~~----------~~--------~~~l~~~~----~~~tklV~l~sp~NPtG~v~d----~~~I~  153 (376)
T PRK06460        112 ------------VDASNP----------GS--------DNIIEKAK----SKRYDVVFVENITNPLLRVVD----ITELS  153 (376)
T ss_pred             ------------EEEECC----------CC--------HHHHHHhc----CCCceEEEEECCCCCCCcccC----HHHHH
Confidence                        000100          00        12233332    245778889999999998887    78999


Q ss_pred             HHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCC-cccceeEEeCHHHHHHhhhccCCCCccccc
Q 010250          299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSA-YMPIGAILVSPEVSEVIHSQSNTLGSFSHG  375 (514)
Q Consensus       299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG-~~pig~v~~~~~i~~~l~~~~~~~~~~~~~  375 (514)
                      ++|++||+++|+||+|..+ ...     .......|++  +++|.++|. ...+|++++++++++.+...       ...
T Consensus       154 ~la~~~g~~vivDea~~~~-~~~-----~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~~~l~~~l~~~-------~~~  220 (376)
T PRK06460        154 KVCKENGSILIVDATFSTP-INQ-----KPLELGADIVVHSASKFLAGHNDVIAGLAAGYGKLLNVIDQM-------RRT  220 (376)
T ss_pred             HHHHHcCCEEEEECCcCcc-ccC-----ChhhcCCCEEEeecceeccCCCCceEEEEecCHHHHHHHHHH-------HHh
Confidence            9999999999999998632 111     1111224665  578998752 14578888999988887632       111


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCcee----------EEEeeeeeEEEEEcc
Q 010250          376 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFAD  440 (514)
Q Consensus       376 ~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~v~g~g~~~~i~~~~  440 (514)
                      .+.+.+|..+..++..++.++  ...+++.++++++.+.|++.+.     +|...          ...|.|.++.|++..
T Consensus       221 ~g~~~~~~~a~~~l~~~~~l~--~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~  298 (376)
T PRK06460        221 LGTSLDPHAAYLTLRGIKTLK--IRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNG  298 (376)
T ss_pred             cCCCCCHHHHHHHHhchhhHH--HHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence            233355665555555565554  3466777788888887775421     22111          124678899999863

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.54  E-value=1.9e-13  Score=140.84  Aligned_cols=233  Identities=15%  Similarity=0.128  Sum_probs=142.2

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCcc
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPA  219 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~  219 (514)
                      .+...+++++++++++   .+.+++++||++|+..++....        ..++.||+....|.+.....   +...|.. 
T Consensus        60 ~p~~~~le~~la~l~g---~~~~v~~ssG~~Ai~~al~al~--------~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~-  127 (390)
T PRK08133         60 NPTVTMFQERLAALEG---AEACVATASGMAAILAVVMALL--------QAGDHVVSSRSLFGSTVSLFEKIFARFGIE-  127 (390)
T ss_pred             ChHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEccCcchhHHHHHHHHHHHcCcE-
Confidence            4557889999999873   3578999999999999987653        23457887766665432110   1011110 


Q ss_pred             ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 010250          220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA  299 (514)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~  299 (514)
                                 +..++..                  +.+++++.+.    +++++|++|.+++..|.+.+    +++|.+
T Consensus       128 -----------v~~vd~~------------------d~~~l~~~i~----~~tklV~ie~p~NptG~v~d----l~~I~~  170 (390)
T PRK08133        128 -----------TTFVDLT------------------DLDAWRAAVR----PNTKLFFLETPSNPLTELAD----IAALAE  170 (390)
T ss_pred             -----------EEEECCC------------------CHHHHHHhcC----cCCeEEEEECCCCCCCCcCC----HHHHHH
Confidence                       1111110                  1366666664    35678889888888898876    999999


Q ss_pred             HHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccc-eeEEeCHHHHHHhhhccCCCCcccccC
Q 010250          300 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPI-GAILVSPEVSEVIHSQSNTLGSFSHGF  376 (514)
Q Consensus       300 l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pi-g~v~~~~~i~~~l~~~~~~~~~~~~~~  376 (514)
                      +|++||+++|+|+++... .....     .....|+++  ++|.++|.+.++ |++++++++++.+...       ....
T Consensus       171 la~~~gi~livD~t~~~~-~~~~p-----l~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~-------~~~~  237 (390)
T PRK08133        171 IAHAAGALLVVDNCFCTP-ALQQP-----LKLGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVFGF-------LRTA  237 (390)
T ss_pred             HHHHcCCEEEEECCCccc-ccCCc-----hhhCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHHHH-------HHHh
Confidence            999999999999998521 11111     112347764  669998855677 4566777776655421       1112


Q ss_pred             CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEc
Q 010250          377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFA  439 (514)
Q Consensus       377 t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~  439 (514)
                      ....+|..+..++..++.+..  ..++..++...+.+.|++..     .+|...          ...|.|.++.|++.
T Consensus       238 g~~~~~~~a~~~l~gl~tl~~--R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~  313 (390)
T PRK08133        238 GPTLSPFNAWVFLKGLETLSL--RMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVK  313 (390)
T ss_pred             CCCCCHHHHHHHHcccchHHH--HHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEc
Confidence            234556666666666554432  23444455666666665431     122211          13467889999985

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.54  E-value=4.6e-13  Score=137.50  Aligned_cols=238  Identities=17%  Similarity=0.199  Sum_probs=149.7

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH  221 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~  221 (514)
                      +++...+|++.|+++.+   .+.+++++||++|+..++....        ..+++|++.++.|.+.........+.....
T Consensus        49 ~~p~~~~le~~lA~l~g---~~~v~~~~gg~~Ai~~~l~all--------~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~  117 (382)
T TIGR02080        49 GNPTRDLLQQALAELEG---GAGAVVTNTGMSAIHLVTTALL--------GPDDLLVAPHDCYGGTYRLLNALAKKGCFR  117 (382)
T ss_pred             CCchHHHHHHHHHHHhC---CCcEEEEcCHHHHHHHHHHHHc--------CCCCEEEEcCCCcHHHHHHHHHHHhhcCeE
Confidence            34557889999999874   3679999999999999987653        345789999999976421111100000000


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                               +..++..                  +.+++++.+.    +++++|++|..++.+|.+.+    +++|.++|
T Consensus       118 ---------v~~~d~~------------------d~~~l~~ai~----~~tklV~l~~p~NPtG~~~d----l~~I~~la  162 (382)
T TIGR02080       118 ---------VLFVDQG------------------DEQALRAALA----QKPKLVLIETPSNPLLRVVD----IAKICHLA  162 (382)
T ss_pred             ---------EEEECCC------------------CHHHHHHhcC----cCceEEEEECCCCCCCEecC----HHHHHHHH
Confidence                     0000000                  1356666664    34678888888888888876    89999999


Q ss_pred             HhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcC-CcccceeEEe-CHHHHHHhhhccCCCCcccccCC
Q 010250          302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSS-AYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFT  377 (514)
Q Consensus       302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~g-G~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t  377 (514)
                      +++|+++|+||+|..+ ...     .......|++  +++|.++| +....|++++ ++++.+.+...       ....+
T Consensus       163 ~~~g~~vvvD~a~~~~-~~~-----~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~-------~~~~g  229 (382)
T TIGR02080       163 KAVGAVVVVDNTFLSP-ALQ-----NPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWW-------ANNLG  229 (382)
T ss_pred             HHcCCEEEEECCCccc-ccC-----CchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHH-------HHccC
Confidence            9999999999999622 111     1112235766  46798876 3245777766 56777666531       12224


Q ss_pred             CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250          378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD  440 (514)
Q Consensus       378 ~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~  440 (514)
                      ...+|+.+..++..++.+...  .++..++...+.+.|+..+     .+|...          ...|.|.++.|++.+
T Consensus       230 ~~~sp~~a~l~lr~l~tl~~R--~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~  305 (382)
T TIGR02080       230 VTGGAFDSYLTLRGLRTLVAR--MRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKG  305 (382)
T ss_pred             CCCCHHHHHHHHcccchHHHH--HHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecC
Confidence            457788888887777765432  4555566666666666431     122211          124678899999863

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.54  E-value=5e-13  Score=138.10  Aligned_cols=234  Identities=14%  Similarity=0.126  Sum_probs=145.0

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      ++...+|+++|+++.+   .+.+++++||+.|+..++....        ..+++||+....|.+ +......     ...
T Consensus        69 ~p~~~~le~~lA~l~g---~~~al~~~sG~~Ai~~~l~all--------~~Gd~Vl~~~~~~~~-t~~~~~~-----~~~  131 (403)
T PRK07810         69 NPTVSMFEERLRLIEG---AEACFATASGMSAVFTALGALL--------GAGDRLVAARSLFGS-CFVVCNE-----ILP  131 (403)
T ss_pred             CchHHHHHHHHHHHhC---CCcEEEECChHHHHHHHHHHHh--------CCCCEEEEccCCcch-HHHHHHH-----HHH
Confidence            4456899999999973   4589999999999999887653        334677776654433 2211100     000


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++.   .+..++.                  .+.+++++.+.    +++.+|++|.+.+..|.+.+    +++|.++|+
T Consensus       132 ~~G~---~v~~vd~------------------~d~~~l~~ai~----~~tklV~~esp~Nptg~v~d----l~~I~~la~  182 (403)
T PRK07810        132 RWGV---ETVFVDG------------------EDLSQWEEALS----VPTQAVFFETPSNPMQSLVD----IAAVSELAH  182 (403)
T ss_pred             HcCc---EEEEECC------------------CCHHHHHHhcC----cCceEEEEECCCCCCCeecC----HHHHHHHHH
Confidence            0010   0001110                  01466777664    35678999988888898876    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccc-eeEEeCHHHHH-HhhhccCCCCcccccCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPI-GAILVSPEVSE-VIHSQSNTLGSFSHGFTY  378 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pi-g~v~~~~~i~~-~l~~~~~~~~~~~~~~t~  378 (514)
                      ++|+++|+||++. .+.....  .   ....|+++  ++|.++|.+..+ |+++++++.+. .+..       +......
T Consensus       183 ~~g~~vivD~a~a-~~~~~~~--~---~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~-------~~~~~g~  249 (403)
T PRK07810        183 AAGAKVVLDNVFA-TPLLQRG--L---PLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQK-------LMRHTGP  249 (403)
T ss_pred             HcCCEEEEECCCC-ccccCCh--h---hcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHH-------HHHHhCC
Confidence            9999999999986 2222111  1   12357775  559998733565 66777777554 2331       1111223


Q ss_pred             CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEE------------------EeeeeeEEEEEcc
Q 010250          379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI------------------RGTGLILGTEFAD  440 (514)
Q Consensus       379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v------------------~g~g~~~~i~~~~  440 (514)
                      ..+|..++.++..|+.+..  ..++..++...+.+.|++.   |.+..|                  .|.|.++.+++..
T Consensus       250 ~~s~~~a~l~l~~L~tl~~--R~~~~~~~a~~~a~~L~~~---p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~  324 (403)
T PRK07810        250 ALSAFNAWVLLKGLETLAL--RVRHSNASALRIAEFLEGH---PAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDA  324 (403)
T ss_pred             CCCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHHhcC---CCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence            4678888888888876643  3455556666666666543   222222                  2678899999864

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.54  E-value=1.2e-12  Score=133.78  Aligned_cols=229  Identities=16%  Similarity=0.141  Sum_probs=142.5

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee---ecCCCc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLP  218 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~---~~s~~~  218 (514)
                      +.+...+|+++|+++.   + +.+++++||++|+..++....        ..+++||+.+++|++......   ...|..
T Consensus        49 ~~p~~~~Le~~lA~l~---~-~~~v~~~sG~~Ai~~~l~all--------~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~  116 (366)
T PRK07582         49 SNPTWRALEAALGELE---G-AEALVFPSGMAAITAVLRALL--------RPGDTVVVPADGYYQVRALAREYLAPLGVT  116 (366)
T ss_pred             CCccHHHHHHHHHHHc---C-CCEEEECCHHHHHHHHHHHhc--------CCCCEEEEeCCCcHhHHHHHHHHHhcCeEE
Confidence            4455788999999986   2 467788999999998886543        334789999999987643211   101111


Q ss_pred             cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ  298 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~  298 (514)
                      .            ..++..                    ++.+. +.    +++..|++|..++.+|.+.+    +++|.
T Consensus       117 v------------~~v~~~--------------------~~~~~-~~----~~t~lV~le~p~NPtg~v~d----i~~I~  155 (366)
T PRK07582        117 V------------REAPTA--------------------GMAEA-AL----AGADLVLAETPSNPGLDVCD----LAALA  155 (366)
T ss_pred             E------------EEECCC--------------------ChHHH-hc----cCceEEEEECCCCCCCCccC----HHHHH
Confidence            0            111110                    00011 11    35677888888888887766    99999


Q ss_pred             HHHHhcCCEEEEechhc-CcccccccceecccCCCCchhc--hhhhhcC-CcccceeEEe-CHHHHHHhhhccCCCCccc
Q 010250          299 AVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVS--FAKALSS-AYMPIGAILV-SPEVSEVIHSQSNTLGSFS  373 (514)
Q Consensus       299 ~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~--~sK~l~g-G~~pig~v~~-~~~i~~~l~~~~~~~~~~~  373 (514)
                      ++|+++|+++|+||+|. .+|.       .......|+++  ++|.|+| +...+|++++ ++++.+.+...       .
T Consensus       156 ~~a~~~g~~lvVD~t~~~~~~~-------~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~-------~  221 (366)
T PRK07582        156 AAAHAAGALLVVDNTTATPLGQ-------RPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERW-------R  221 (366)
T ss_pred             HHHHHcCCEEEEECCCCCcccc-------CchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHH-------H
Confidence            99999999999999985 2221       11123457764  6799977 3367888887 47777766531       1


Q ss_pred             ccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCceeE----------EEeeeeeEEEEE
Q 010250          374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIGE----------IRGTGLILGTEF  438 (514)
Q Consensus       374 ~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~~----------v~g~g~~~~i~~  438 (514)
                      .......+|+.+..+...|+.+.  -..++..+++..+.+.|++...     +|....          ..|.|.++.|++
T Consensus       222 ~~~g~~~~~~~a~l~~r~l~tl~--~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~  299 (366)
T PRK07582        222 LLAGAIPGPFEAWLAHRSLGTLG--LRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFEL  299 (366)
T ss_pred             HHhCCCCCHHHHHHHHhccccHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEe
Confidence            11123446777777766666443  2346666777778877776421     222111          125788999998


Q ss_pred             c
Q 010250          439 A  439 (514)
Q Consensus       439 ~  439 (514)
                      .
T Consensus       300 ~  300 (366)
T PRK07582        300 A  300 (366)
T ss_pred             C
Confidence            5

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=99.54  E-value=5.4e-12  Score=123.38  Aligned_cols=291  Identities=15%  Similarity=0.142  Sum_probs=172.1

Q ss_pred             CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcc
Q 010250          161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      +++++..+++++.|+++.+-+..        ...+-+++..+.|.|......--+|....        |  .+....+.|
T Consensus       145 dP~~~Vv~~G~T~ane~l~fcLa--------dpgdafLvPtPyY~gfdrdl~~rTgveiv--------p--v~c~Ss~~f  206 (471)
T KOG0256|consen  145 DPERVVVTNGATSANETLMFCLA--------DPGDAFLVPTPYYPGFDRDLRWRTGVEIV--------P--VHCSSSNGF  206 (471)
T ss_pred             CccceEEecccchhhHHHHHHhc--------CCCceeeecCCCCCcccccceeccCceEE--------E--EEeecCCCc
Confidence            56789999999999998776553        34577899999998875444333332211        0  111111111


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG  318 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g  318 (514)
                      +-             ..+.||..+.+.  ...++.++|+-..+++-|++. +++.|..+...+.++++.+|+|||++|=-
T Consensus       207 ~i-------------tv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~-~~e~L~~ll~Fa~~kniHvI~DEIya~sV  272 (471)
T KOG0256|consen  207 QI-------------TVEALEAALNQARKLGLKVKGVLITNPSNPLGTTL-SPEELISLLNFASRKNIHVISDEIYAGSV  272 (471)
T ss_pred             cc-------------cHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCcc-CHHHHHHHHHHHhhcceEEEeehhhcccc
Confidence            11             135566554432  224565555544444555554 56889999999999999999999998542


Q ss_pred             cccccce-e-cc---cCCCCchh----chhhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHH
Q 010250          319 RLGTMFG-C-DK---YSIKPDLV----SFAKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVA  388 (514)
Q Consensus       319 r~G~~~~-~-~~---~gv~pDiv----~~sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa  388 (514)
                      .....|- + +.   ....||.+    .+||-||-.++++|++.. ++.+.....+-+    .     -...++..+--.
T Consensus       273 F~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kms----s-----f~~vSs~tQ~~l  343 (471)
T KOG0256|consen  273 FDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMS----S-----FGLVSSQTQYLL  343 (471)
T ss_pred             cCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHh----h-----ccCCcHHHHHHH
Confidence            1111221 1 11   11245643    689966654499999998 456666665311    1     112233333322


Q ss_pred             HHHH--HHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH
Q 010250          389 IEAL--KIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE  463 (514)
Q Consensus       389 ~aal--~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~  463 (514)
                      ..-|  +.+.+   .+-..+++.+.+++.++|+++ ++|.  --.+.|+++++++..--.+.. +..    --.+++.+.
T Consensus       344 a~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~c--l~s~AGlF~wvDlr~lL~s~t-fe~----El~Lw~~i~  415 (471)
T KOG0256|consen  344 ASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPC--LKSNAGLFCWVDLRKLLTSLT-FEG----ELELWERIL  415 (471)
T ss_pred             HHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCce--eecCCeeEEEEEhHHhcCcCC-hHH----HHHHHHHHH
Confidence            2222  11111   122456777778888888887 3343  446789999999875332211 211    223556666


Q ss_pred             HC-CcEEEeeC-------CEEEEeCCCCC-CHHHHHHHHHHHHHHHHH
Q 010250          464 KH-GMLVRVSG-------DNIMMSPPFIM-SPEEVDELISKYGKALKA  502 (514)
Q Consensus       464 ~~-Gv~~~~~g-------~~iRi~p~~~~-t~e~id~~~~~l~~~l~~  502 (514)
                      ++ ++.++|+.       +++|++  +.. .++.++-++++|...+..
T Consensus       416 ~~vklnlSpG~s~~C~EpGWFRvc--FAn~~~~t~~~am~Ri~~~~~~  461 (471)
T KOG0256|consen  416 DNVKLNLSPGSSCHCHEPGWFRVC--FANMSEETLEVAMRRLKQFLDS  461 (471)
T ss_pred             HhhccccCCCCcceecCCCeEEEE--eccCCHHHHHHHHHHHHHHHHh
Confidence            66 88888763       689999  554 445555599999998874

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.54  E-value=1.3e-12  Score=143.17  Aligned_cols=314  Identities=12%  Similarity=0.110  Sum_probs=186.1

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeC-ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTN-SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL  220 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~-sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~  220 (514)
                      +.....+|.+.|++++   +++.+.+.. ||+.+..+++...+.|+..+|.++|++||+. .+-||+........|... 
T Consensus       541 ~lq~i~elq~~l~eLt---Gmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp-~saHgtNpasa~~~GieV-  615 (954)
T PRK12566        541 YRAMIDELEAWLCAIT---GFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIP-SSAHGTNPASAQMAGMRV-  615 (954)
T ss_pred             HHHHHHHHHHHHHHHH---CCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEec-ccccccCHHHHHHCCCEE-
Confidence            4455668888999987   677777765 8999998999999999998888777666654 477766543332222211 


Q ss_pred             cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250          221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV  300 (514)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l  300 (514)
                                 ..+++..             -+..++++|++++.+.. +++++|++.-.+..| .+..+   +++|.++
T Consensus       616 -----------v~Vp~D~-------------~G~iDle~L~a~I~~~~-~~laaVmiT~Pnt~G-v~e~~---V~eI~~i  666 (954)
T PRK12566        616 -----------VIVECDP-------------DGNVDLDDLKAKAAAAG-DRLSCLMITYPSTHG-VYEEG---IREICEV  666 (954)
T ss_pred             -----------EEeccCC-------------CCCcCHHHHHHHhhccC-CCEEEEEEEecCcCc-eecch---HHHHHHH
Confidence                       1122210             11233688888886433 567777776554444 44333   9999999


Q ss_pred             HHhcCCEEEEechhcCcccccccceec-ccCCCCchhchh--hhhc----CCcccceeEEeCHHHHHHhhhccC--CCCc
Q 010250          301 VKKYDILFIADEVICAFGRLGTMFGCD-KYSIKPDLVSFA--KALS----SAYMPIGAILVSPEVSEVIHSQSN--TLGS  371 (514)
Q Consensus       301 ~~~~gillI~DEv~tG~gr~G~~~~~~-~~gv~pDiv~~s--K~l~----gG~~pig~v~~~~~i~~~l~~~~~--~~~~  371 (514)
                      |+++|+++++|-++. .+-.    ... .-.+..|+++++  |.|+    +|+..+|.+.+++.+...+.....  ..+.
T Consensus       667 ah~~Galv~vDgA~~-~a~~----~l~~Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~  741 (954)
T PRK12566        667 VHQHGGQVYMDGANL-NAQV----GLARPADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGP  741 (954)
T ss_pred             HHHcCCEEEEEeeCh-hhcc----CCCChhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCC
Confidence            999999999999986 2211    111 123446888765  8664    454446776777766655543210  0010


Q ss_pred             c-ccc---CCCCCcHHHHHHHHHHHHHHhhccHHH---HHHHHHHHHHhhhhhccCCCceeEEEeeee-e--EEEEEccC
Q 010250          372 F-SHG---FTYSGHPVSCAVAIEALKIYKERNIVE---QVNKIAPKFQDGVKAFSDSPIIGEIRGTGL-I--LGTEFADN  441 (514)
Q Consensus       372 ~-~~~---~t~~~~pl~~aaa~aal~~~~~~~~~~---~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~-~--~~i~~~~~  441 (514)
                      . ..+   ....++.+.+.++..-+..+-.+ +.+   ....+..+++++|.+.....+ ..  ..+. +  +.+.+..-
T Consensus       742 ~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~~-~~--~~~~~~hEfii~~~~l  817 (954)
T PRK12566        742 DPNNGAVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVLY-RG--RNERVAHECILDLRPL  817 (954)
T ss_pred             CCCCCceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCCc-CC--CCCCeeeEEEEEcccc
Confidence            0 111   12233333344444444544433 322   224577888888866322122 10  0111 1  12232211


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHCCcEEE----eeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VSGDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       442 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      +..     ... ....+.++|.+.|+...    |..+.+|++|....|++|||+++++|+...+++.
T Consensus       818 ~~~-----~g~-~~~dvakRL~d~Gihapt~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~  878 (954)
T PRK12566        818 KAQ-----TGI-SEEDVAKRLMDYGFHAPTMSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIG  878 (954)
T ss_pred             ccc-----cCC-CHHHHHHHHHHCCcEEeEEeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence            100     000 13558888999998765    3456799999999999999999999988887655

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.53  E-value=6.4e-13  Score=136.55  Aligned_cols=238  Identities=17%  Similarity=0.168  Sum_probs=147.0

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH  221 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~  221 (514)
                      +.+...+|+++|+++.+   .+.+++++||++|+..++....        ..+++|++.++.|++...........    
T Consensus        50 ~~pt~~~L~~~lA~l~g---~~~~i~~~sg~~Ai~~~l~~l~--------~~GD~Vl~~~~~y~~~~~~~~~~~~~----  114 (386)
T PRK08045         50 GNPTRDVVQRALAELEG---GAGAVLTNTGMSAIHLVTTVFL--------KPGDLLVAPHDCYGGSYRLFDSLAKR----  114 (386)
T ss_pred             CCccHHHHHHHHHHHhC---CCeEEEECCHHHHHHHHHHHHc--------CCCCEEEEcCCCcHHHHHHHHHHHhh----
Confidence            34556789999999874   3479999999999999987553        34568999999997632111111000    


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                        .+.   .+..++.                  .+.+++++.+.    +++.+|++|..++..|.+.+    +++|.++|
T Consensus       115 --~gi---~v~~vd~------------------~d~e~l~~~l~----~~tklV~l~sP~NPtG~v~d----i~~I~~ia  163 (386)
T PRK08045        115 --GCY---RVLFVDQ------------------GDEQALRAALA----EKPKLVLVESPSNPLLRVVD----IAKICHLA  163 (386)
T ss_pred             --CCe---EEEEeCC------------------CCHHHHHHhcc----cCCeEEEEECCCCCCCEecC----HHHHHHHH
Confidence              000   0000000                  01356666653    35678888888888888876    89999999


Q ss_pred             HhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCC-cccceeEEe-CHHHHHHhhhccCCCCcccccCC
Q 010250          302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSA-YMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFT  377 (514)
Q Consensus       302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG-~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t  377 (514)
                      +++|+++|+||+|... ..     ........|++  +++|.++|. ....|++++ ++++.+.+...       ....+
T Consensus       164 ~~~g~~vivDeay~~~-~~-----~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~-------~~~~g  230 (386)
T PRK08045        164 REAGAVSVVDNTFLSP-AL-----QNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWW-------ANNIG  230 (386)
T ss_pred             HHcCCEEEEECCCCcc-cc-----CCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHH-------HHhcC
Confidence            9999999999998633 11     11122334776  467988862 134677766 56776665421       11223


Q ss_pred             CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250          378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD  440 (514)
Q Consensus       378 ~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~  440 (514)
                      ...+|+.+..++..|+.+..  ..++..++...+.+.|++.+     .+|...          ...|.|.++.|++.+
T Consensus       231 ~~~~p~~~~l~~rgl~tl~~--R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~  306 (386)
T PRK08045        231 VTGGAFDSYLLLRGLRTLVP--RMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG  306 (386)
T ss_pred             CCCCHHHHHHHHhhhccHHH--HHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecC
Confidence            44678888877777775532  24555555666666665431     122111          124678899999863

>PRK05968 hypothetical protein; Provisional

Probab=99.53  E-value=1.4e-12  Score=134.48  Aligned_cols=230  Identities=14%  Similarity=0.089  Sum_probs=141.1

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccce-e--eeecCCCcc
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL-I--AASLSGLPA  219 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~-~--~~~~s~~~~  219 (514)
                      .+...+|+++++++++   .+..++++||+.|+..++....        ..+++||+....|++... .  .+...|...
T Consensus        62 ~p~~~~le~~lA~l~g---~~~av~~~sG~~Ai~~al~al~--------~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v  130 (389)
T PRK05968         62 NPTVRAFEEMLAKLEG---AEDARGFASGMAAISSTVLSFV--------EPGDRIVAVRHVYPDAFRLFETILKRMGVEV  130 (389)
T ss_pred             ChhHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEeCCCchHHHHHHHHHHHHcCceE
Confidence            3446789999999873   3467778999999998886543        234688898888876421 0  011111100


Q ss_pred             ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 010250          220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA  299 (514)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~  299 (514)
                                  ..++..                  +.+++++.+.     ++.+|++|.+.+..+.+.+    +++|.+
T Consensus       131 ------------~~vd~~------------------d~~~l~~~i~-----~tklV~ie~pt~~~~~~~d----l~~i~~  171 (389)
T PRK05968        131 ------------DYVDGR------------------DEEAVAKALP-----GAKLLYLESPTSWVFELQD----VAALAA  171 (389)
T ss_pred             ------------EEeCCC------------------CHHHHHHhcc-----cCCEEEEECCCCCCCcHHH----HHHHHH
Confidence                        001100                  1356666541     3457888876666555544    999999


Q ss_pred             HHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcC-CcccceeEEeCHHHHHHhhhccCCCCcccccC
Q 010250          300 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSS-AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF  376 (514)
Q Consensus       300 l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~g-G~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~  376 (514)
                      +|++||+++|+|+++... .....  . .+|  .|+++  ++|.++| |....|++++++++++.+.....   . ..+ 
T Consensus       172 la~~~gi~vivD~a~a~~-~~~~p--~-~~g--~Divv~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~---~-~~g-  240 (389)
T PRK05968        172 LAKRHGVVTMIDNSWASP-VFQRP--I-TLG--VDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAY---P-YLG-  240 (389)
T ss_pred             HHHHcCCEEEEECCCcch-hccCc--h-hcC--CcEEEeeccccccCCCCeEEEEEEECHHHHHHHHHHHH---H-hCC-
Confidence            999999999999998632 21111  1 123  47664  5699987 32345777788888877753110   0 112 


Q ss_pred             CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEE-------------EeeeeeEEEEEc
Q 010250          377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI-------------RGTGLILGTEFA  439 (514)
Q Consensus       377 t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-------------~g~g~~~~i~~~  439 (514)
                       ...+|..++.++..|+.+.  ...++..++.+.+.+.|++.   |.+..+             .|.|.++.|++.
T Consensus       241 -~~~~~~~A~~~l~~L~tl~--~r~~~~~~~a~~la~~L~~~---p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~  310 (389)
T PRK05968        241 -AKLSPFEAWLLLRGLRTLP--LRMKAHEASALEIARRLKAH---PVVERVCHPALANHPPAGLSGTSGLFSFIFR  310 (389)
T ss_pred             -CCCChHHHHHHHcccCcHH--HHHHHHHHHHHHHHHHHHhC---CCccEEECCCCCCChHHhCCCCceEEEEEEC
Confidence             2346777777777777552  33455556677777777765   322222             255778888886

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.53  E-value=2.7e-13  Score=138.71  Aligned_cols=236  Identities=11%  Similarity=0.100  Sum_probs=146.5

Q ss_pred             chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250          144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK  223 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~  223 (514)
                      +....|+++|+++.+   .+.+++++||++|+..++....        ..+++||+.++.|++.........      ..
T Consensus        50 Pt~~~lE~~lA~l~g---~~~~~~~~sG~~Ai~~al~all--------~~GD~Vl~~~~~y~~t~~~~~~~~------~~  112 (377)
T TIGR01324        50 LTHFALQDAMCELEG---GAGCYLYPSGLAAVTNSILAFV--------KAGDHVLMVDSAYEPTRYFCDIVL------KR  112 (377)
T ss_pred             ccHHHHHHHHHHHhC---CCcEEEECcHHHHHHHHHHHhc--------CCCCEEEEcCCCcHHHHHHHHHHH------Hh
Confidence            456789999999863   4689999999999999997653        335688888999987532110000      00


Q ss_pred             CCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 010250          224 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK  303 (514)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~  303 (514)
                      ++..   +..++.          .  +      .+++++.+.    +++.+|++|.+.+..|.+.+    +++|.++|++
T Consensus       113 ~gi~---v~~~d~----------~--~------~e~l~~~i~----~~tklV~lesp~Np~g~~~d----l~~I~~la~~  163 (377)
T TIGR01324       113 MGVD---ITYYDP----------L--I------GEDIATLIQ----PNTKVLFLEAPSSITFEIQD----IPAIAKAARN  163 (377)
T ss_pred             cCcE---EEEECC----------C--C------HHHHHHhcC----CCceEEEEECCCCCCCcHHH----HHHHHHHHHH
Confidence            1100   000000          0  0      145665553    45779999988888888876    9999999999


Q ss_pred             cCCEEEEechhcCcccccccceecccCCCCchhch--hhhhcCC-cccceeEEeCHHHHHHhhhccCCCCcccccCCCCC
Q 010250          304 YDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSA-YMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG  380 (514)
Q Consensus       304 ~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG-~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~  380 (514)
                      ||+++|+|++|+ .|.....     .....|+++.  +|.++|. ..-.|+++++++.++.+...       ........
T Consensus       164 ~g~~livD~t~a-~g~~~~p-----l~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~-------~~~~G~~l  230 (377)
T TIGR01324       164 PGIVIMIDNTWA-AGLLFKP-----LEHGVDISIQAGTKYLVGHSDIMIGTVVANARTWDQLREH-------SYLMGQMV  230 (377)
T ss_pred             cCCEEEEECCCc-cccccCc-----cccCceEEEecCceeccCCCCceEEEEEeCHHHHHHHHHH-------HHHhCCCC
Confidence            999999999997 4433322     2234687754  6999872 13457788888877766521       11123344


Q ss_pred             cHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250          381 HPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD  440 (514)
Q Consensus       381 ~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~  440 (514)
                      +|..+...+..++.+..  ..++..+++..+.+.|++..     .+|...          ...+.|.++.|++.+
T Consensus       231 ~p~~a~~~~rgl~tl~~--R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~  303 (377)
T TIGR01324       231 DADDAYTTLRGLRTLGV--RLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQR  303 (377)
T ss_pred             CHHHHHHHHhhhhhHHH--HHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECC
Confidence            67777666666665432  24555555555555555421     122211          123668899999863

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.53  E-value=4.8e-13  Score=136.54  Aligned_cols=317  Identities=14%  Similarity=0.120  Sum_probs=183.4

Q ss_pred             CHHHHHHHHHHHhc-CCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEe-CChhHHHHHHHHHHHHHHhhcCCCCcc
Q 010250          118 EPRLVAAATAQLNT-LPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFT-NSGSEANDTQVKLVWYYNNALGRPNKK  195 (514)
Q Consensus       118 ~p~v~~A~~~~l~~-~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~-~sGseA~~~Alk~a~~~~~~~~~~~~~  195 (514)
                      +|+|++|+..+... +...|+. ....+...+..+.+++++...+..+|+|+ +|||.+++.++....        .+  
T Consensus        15 ~~~v~~a~~~~~~~~~~~~hr~-~~f~~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~--------~~--   83 (361)
T TIGR01366        15 RLEQLQALTTTAASLFGTSHRQ-APVKNLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLI--------EK--   83 (361)
T ss_pred             CHHHHHHHHhcCccccccCcCC-hHHHHHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcc--------cc--
Confidence            78899887754211 1111211 11235566778888888853333468875 779999999996542        11  


Q ss_pred             EEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250          196 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF  275 (514)
Q Consensus       196 ~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav  275 (514)
                      +.+....+.+|......+... +- .   .    .+..++++.       +           ..++..+    .+++..|
T Consensus        84 ~~l~i~~G~~~~~~~~~a~~~-~~-~---~----~~~~~~~~~-------~-----------~~~~~~~----~~~~~lV  132 (361)
T TIGR01366        84 KSLHLSFGEFSSKFAKAVKLA-PW-L---G----EPIIVTADP-------G-----------SAPEPQA----DPGVDVI  132 (361)
T ss_pred             cccEEecCHHHHHHHHHHHhh-hc-c---C----CceEEecCC-------C-----------CCCCCcc----CCCCCEE
Confidence            333344455554322221110 00 0   0    011111110       0           0111111    2467788


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEE
Q 010250          276 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAIL  353 (514)
Q Consensus       276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~  353 (514)
                      .+-...+.+|++.|    +++|   ++++|+++|+|-+|+ +|-.  ...++  .  .|++++|  |++++. -.++.++
T Consensus       133 ~~~h~et~tG~~~p----i~~I---~~~~g~~~iVDavqs-~g~~--~idv~--~--~D~~~~s~~K~lg~~-~Gl~~~~  197 (361)
T TIGR01366       133 AWAHNETSTGVAVP----VRRP---EGSDDALVVIDATSG-AGGL--PVDIA--E--TDVYYFAPQKNFASD-GGLWLAI  197 (361)
T ss_pred             EEcccCCccceecc----cccc---cccCCCeEEEEcCcc-ccCC--CCCHH--H--CCEEEEEchhhcCCC-CceEEEE
Confidence            88888888899988    5555   689999999999998 5322  12222  2  5888776  988763 2356667


Q ss_pred             eCHHHHHHhhhccCCCC---cc----------cccCCCCCcHHH-HHHHHHHHHHHhhc-c---HHHHHHHHHHHHHhhh
Q 010250          354 VSPEVSEVIHSQSNTLG---SF----------SHGFTYSGHPVS-CAVAIEALKIYKER-N---IVEQVNKIAPKFQDGV  415 (514)
Q Consensus       354 ~~~~i~~~l~~~~~~~~---~~----------~~~~t~~~~pl~-~aaa~aal~~~~~~-~---~~~~~~~~~~~l~~~L  415 (514)
                      +++++++.+.+......   .+          ..+.|++..++. +.+..++++.+++. +   ..++.+++.+++++.|
T Consensus       198 ~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l  277 (361)
T TIGR01366       198 MSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWA  277 (361)
T ss_pred             ECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHH
Confidence            79988877653211000   00          012344444444 33556788877654 2   4577888888899888


Q ss_pred             hhccCC-CceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCHHH
Q 010250          416 KAFSDS-PIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSPEE  488 (514)
Q Consensus       416 ~~l~~~-~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~e~  488 (514)
                      +++... ++..... .......+.|.+..           ....+...|.++||.+.+.     ++.+|++....+|++|
T Consensus       278 ~~~~~~~~~~~~~~~~s~~v~~v~~~~g~-----------~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~d  346 (361)
T TIGR01366       278 QERPYATPFVTDPGKRSQVVGTIDFVDDI-----------DAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDD  346 (361)
T ss_pred             HhCCCcccCCCChhhcccceEEEECCCcc-----------CHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHH
Confidence            877321 1211110 01112233342211           1445778888999998653     3469999999999999


Q ss_pred             HHHHHHHHHHHHHH
Q 010250          489 VDELISKYGKALKA  502 (514)
Q Consensus       489 id~~~~~l~~~l~~  502 (514)
                      |+++++.|++++++
T Consensus       347 i~~l~~al~~~~~~  360 (361)
T TIGR01366       347 VEALTECVDWVVER  360 (361)
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999998765

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.52  E-value=1.7e-12  Score=134.13  Aligned_cols=237  Identities=16%  Similarity=0.161  Sum_probs=144.7

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      .+...+|+++|+++.+.   +..++++||++|+..++....        ..+++|++..+.|++.........      .
T Consensus        59 ~p~~~~Le~~lA~l~g~---~~~v~~~sG~~Ai~~~l~all--------~pGD~Vvv~~p~Y~~t~~~~~~~~------~  121 (405)
T PRK08776         59 NPTRDLLGEALAELEGG---AGGVITATGMGAINLVLNALL--------QPGDTLVVPHDAYGGSWRLFNALA------K  121 (405)
T ss_pred             ChHHHHHHHHHHHHhCC---CceEEEcCHHHHHHHHHHHHh--------CCCCEEEEccCCchHHHHHHHHHH------H
Confidence            44457899999998642   456788889999988887653        234678998999976321100000      0


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++   ..+..++..                  +.+++++.+.    +++.+|++|..++..|.+.+    +++|.++|+
T Consensus       122 ~~g---~~v~~v~~~------------------d~~~l~~~i~----~~tklV~l~~P~NPtG~v~d----l~~I~~la~  172 (405)
T PRK08776        122 KGH---FALITADLT------------------DPRSLADALA----QSPKLVLIETPSNPLLRITD----LRFVIEAAH  172 (405)
T ss_pred             hcC---cEEEEECCC------------------CHHHHHHhcC----cCCeEEEEECCCCCCCccCC----HHHHHHHHH
Confidence            001   000111110                  1356666553    34667777777777888765    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhch--hhhhcCC-cccceeEEe-CHHHHHHhhhccCCCCcccccCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSA-YMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTY  378 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG-~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~  378 (514)
                      +||+++|+||+|..-... ..  .   ....|++++  +|.++|. ....|++++ ++++.+.+...       .....+
T Consensus       173 ~~gi~vIvD~a~a~~~~~-~p--l---~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~-------~~~~g~  239 (405)
T PRK08776        173 KVGALTVVDNTFLSPALQ-KP--L---EFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWW-------ANALGL  239 (405)
T ss_pred             HcCCEEEEECCCcccccC-Cc--c---cccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHH-------HHhcCC
Confidence            999999999998632111 11  1   123577754  5988863 244666666 56776666431       111223


Q ss_pred             CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250          379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD  440 (514)
Q Consensus       379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~  440 (514)
                      ..+|+.+...+..++.++.  ..++..++...+.+.|++.+     .+|...          ...|.|.++.|++..
T Consensus       240 ~~s~~~a~l~~~gl~tl~~--r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~  314 (405)
T PRK08776        240 TGSPFDAFLTLRGLRTLDA--RLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEG  314 (405)
T ss_pred             CCCHHHHHHHHhhhCcHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcC
Confidence            4689988888877776642  45666667777777766531     122111          124678899999863

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.52  E-value=3.9e-13  Score=138.89  Aligned_cols=237  Identities=13%  Similarity=0.102  Sum_probs=146.9

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      .+...+|+++|++++   +.+.++.++||+.|+..++....        ..+++||+.+..|.+.........      .
T Consensus        64 ~p~~~~Le~~lA~l~---G~~~~~~~~sG~~Ai~~~l~~~l--------~~Gd~Vl~~~~~y~~~~~~~~~~~------~  126 (398)
T PRK07504         64 NPTVDMFEKRMCALE---GAEDARATASGMAAVTAAILCQV--------KAGDHVVAARALFGSCRYVVETLL------P  126 (398)
T ss_pred             CchHHHHHHHHHHHh---CCCeeeEecCHHHHHHHHHHHHh--------CCCCEEEEcCCchhHHHHHHHHHH------h
Confidence            455688999999987   34566778999999987776443        234688888888866432111000      0


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++..   +..++.                  .+.+++++.+.    +++.+|++|.+++..|.+.+    +++|.++|+
T Consensus       127 ~~G~~---v~~vd~------------------~d~e~l~~ai~----~~tklV~lesp~NptG~v~d----l~~I~~la~  177 (398)
T PRK07504        127 RYGIE---STLVDG------------------LDLDNWEKAVR----PNTKVFFLESPTNPTLEVID----IAAVAKIAN  177 (398)
T ss_pred             hcCeE---EEEECC------------------CCHHHHHHhcC----cCceEEEEECCCCCCcEecC----HHHHHHHHH
Confidence            01100   000110                  11466666654    35778888888888888887    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccce-eEEeCHHHHHH-hhhccCCCCcccccCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIG-AILVSPEVSEV-IHSQSNTLGSFSHGFTY  378 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig-~v~~~~~i~~~-l~~~~~~~~~~~~~~t~  378 (514)
                      ++|+++|+||+|+.. .....     .....|+++  ++|.++|.+.++| +++++++.+.. +...       ......
T Consensus       178 ~~gi~lvvD~a~a~~-~~~~~-----~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~-------~~~~g~  244 (398)
T PRK07504        178 QAGAKLVVDNVFATP-LFQKP-----LELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDY-------FRHTGP  244 (398)
T ss_pred             HcCCEEEEECCcccc-ccCCc-----hhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHH-------HHHhCC
Confidence            999999999999721 21111     122357765  5699987447786 55666665542 3210       111123


Q ss_pred             CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250          379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD  440 (514)
Q Consensus       379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~  440 (514)
                      ..+|..++.++..|+.+..  ..++..++...+.+.|++..     .+|...          ..+|.|.|+.|++.+
T Consensus       245 ~~s~~~A~~~l~~L~tl~~--R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~  319 (398)
T PRK07504        245 SLSPFNAWTLLKGLETLPV--RVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKG  319 (398)
T ss_pred             CCCHHHHHHHHhccchHHH--HHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCC
Confidence            4678888888888887643  34555566677777666531     122211          124668899999953

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.52  E-value=9.9e-12  Score=128.12  Aligned_cols=316  Identities=16%  Similarity=0.134  Sum_probs=181.1

Q ss_pred             HHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEE
Q 010250          119 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI  198 (514)
Q Consensus       119 p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii  198 (514)
                      ++-.+++.+.+....+.      ..+...++++.++++++   .++.++++||++|+..+++...      . ..+++||
T Consensus        10 ~~~~~~v~~~~~~~~~~------~g~~~~~le~~la~~~g---~~~~v~~~sgt~al~~~l~al~------~-~~Gd~Vi   73 (380)
T TIGR03588        10 QDDIDAVVEVLKSDFLT------QGPTVPAFEEALAEYVG---AKYAVAFNSATSALHIACLALG------V-GPGDRVW   73 (380)
T ss_pred             HHHHHHHHHHHhcCCcc------CChhHHHHHHHHHHHHC---CCeEEEEcCHHHHHHHHHHHcC------C-CCCCEEE
Confidence            45577788877654221      12345789999999883   3567788899999999997651      1 2346799


Q ss_pred             EEecCCcccceeeeecCCCccccCCCCCCCCcccccCC-CCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEE
Q 010250          199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC-PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIA  277 (514)
Q Consensus       199 ~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aaviv  277 (514)
                      +....|++........+..+.+             ++. +..             ...+.+++++.+.+...+++.+|++
T Consensus        74 v~~~~~~~~~~~~~~~G~~~~~-------------~~~~~~~-------------~~~d~~~l~~~i~~~~~~~t~~v~~  127 (380)
T TIGR03588        74 TTPITFVATANCALYCGAKVDF-------------VDIDPDT-------------GNIDEDALEKKLAAAKGKLPKAIVP  127 (380)
T ss_pred             eCCcchHHHHHHHHHcCCEEEE-------------EecCCCc-------------CCcCHHHHHHHhhcccCCCceEEEE
Confidence            9888887653221111111110             111 000             0122577777775321123455553


Q ss_pred             ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC--CCchhchh----hhhcCCccccee
Q 010250          278 EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI--KPDLVSFA----KALSSAYMPIGA  351 (514)
Q Consensus       278 Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv--~pDiv~~s----K~l~gG~~pig~  351 (514)
                        ++ ..|...+    +++|.++|++||+++|.|++|+ +|-.   +.....|.  .-|+.++|    |.++.|  ..|+
T Consensus       128 --~~-~~G~~~~----~~~i~~l~~~~~~~lI~D~a~a-~g~~---~~~~~~g~~~~~d~~~~S~~~~K~~~~~--~GG~  194 (380)
T TIGR03588       128 --VD-FAGKSVD----MQAIAALAKKHGLKIIEDASHA-LGAE---YGGKPVGNCRYADATVFSFHPVKIITTA--EGGA  194 (380)
T ss_pred             --eC-CCCccCC----HHHHHHHHHHcCCEEEEECCCc-ccCc---cCCEeCCCccccceEEEecCCCCccccc--CceE
Confidence              22 2465555    8999999999999999999998 4321   11122232  33877765    777654  3455


Q ss_pred             EEe-CHHHHHHhhhc---cCCCC---------------cccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 010250          352 ILV-SPEVSEVIHSQ---SNTLG---------------SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQ  412 (514)
Q Consensus       352 v~~-~~~i~~~l~~~---~~~~~---------------~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~  412 (514)
                      ++. ++++.+.++..   +....               ....|..+..+.+.++.+++.|+.+  +.+.++-+++.+++.
T Consensus       195 v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l--~~~~~~r~~~~~~~~  272 (380)
T TIGR03588       195 VTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKL--DRFVAKRREIAARYD  272 (380)
T ss_pred             EEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence            665 46666655421   00000               0011223344566666677666655  346677788888888


Q ss_pred             hhhhhccCCCceeE---EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--------------C--
Q 010250          413 DGVKAFSDSPIIGE---IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------------G--  473 (514)
Q Consensus       413 ~~L~~l~~~~~~~~---v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------------g--  473 (514)
                      +.|..+........   ....-.+..+.+..... .        ..+.+.+.|.++||.++..              +  
T Consensus       273 ~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~--------~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~  343 (380)
T TIGR03588       273 RLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFG-C--------TRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDG  343 (380)
T ss_pred             HHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCC-C--------CHHHHHHHHHHCCCCcccCCcccccChhhhccCCcC
Confidence            88887632111111   01111223333432110 0        1456788899999876510              0  


Q ss_pred             ----------CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          474 ----------DNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       474 ----------~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                                +.|++......|++|++.+++.|++++
T Consensus       344 ~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~  380 (380)
T TIGR03588       344 DLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL  380 (380)
T ss_pred             CCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence                      346666666789999999999998764

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.52  E-value=9.5e-12  Score=127.60  Aligned_cols=312  Identities=14%  Similarity=0.078  Sum_probs=182.3

Q ss_pred             HHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEE
Q 010250          119 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI  198 (514)
Q Consensus       119 p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii  198 (514)
                      ++..+++.+.+.....+     +..+...++++.+++.+   +.+++++++||++|+..+++.+.      . .++++||
T Consensus        11 ~~e~~a~~~~~~~~~~~-----~~g~~~~~~e~~la~~~---g~~~~v~~~sgt~aL~~~l~al~------~-~pGd~Vi   75 (376)
T TIGR02379        11 GQELEYIAEAISEGKLS-----GDGPFSRRCETWLENRT---GTKKALLTPSCTAALEMAALLLD------I-QPGDEVI   75 (376)
T ss_pred             HHHHHHHHHHHHcCCcc-----CCcHHHHHHHHHHHHHh---CCCeEEEeCCHHHHHHHHHHHcC------C-CCcCEEE
Confidence            55678888887654321     12345688899998886   45789999999999998887541      1 3457899


Q ss_pred             EEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEE
Q 010250          199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIA  277 (514)
Q Consensus       199 ~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aaviv  277 (514)
                      +.+.+|.+........+..+.             .++.. +.|.             .+.+++++.+.    +++.+|+ 
T Consensus        76 v~~~t~~~~~~~~~~~G~~~v-------------~vd~d~~~~~-------------~d~~~le~~i~----~~tk~Ii-  124 (376)
T TIGR02379        76 MPSYTFVSTANAFVLRGAKIV-------------FVDIRPDTMN-------------IDETLIESAIT----HRTKAIV-  124 (376)
T ss_pred             ECCCCcHHHHHHHHHcCCEEE-------------EEecCCCcCC-------------CCHHHHHHhcC----cCceEEE-
Confidence            999888775432222221111             11111 0000             11466776664    2455555 


Q ss_pred             ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh----hhhcCCcccceeEE
Q 010250          278 EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAIL  353 (514)
Q Consensus       278 Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s----K~l~gG~~pig~v~  353 (514)
                       |++. .|...+    +++|.++|++||+++|.|++|+ +|..   +.-...|..-|+.+||    |.++.| ...|+++
T Consensus       125 -p~~~-~G~~~d----~~~I~~la~~~~i~vIeDaa~~-~g~~---~~~~~~g~~~~~~~fSf~~~K~l~~g-~~gG~v~  193 (376)
T TIGR02379       125 -PVHY-AGVACD----MDTIMALANKHQLFVIEDAAQG-VMST---YKGRALGSIGHLGTFSFHETKNYTSG-GEGGALL  193 (376)
T ss_pred             -EeCC-CCCccC----HHHHHHHHHHCCCEEEEECccc-cCCc---cCCcccCCCCCEEEEeCCCCCcCccc-CCceEEE
Confidence             4443 465555    8999999999999999999997 4321   1111223334777887    888766 4678877


Q ss_pred             eC-HHHHHHhhhccC---CC-C-------c---ccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc
Q 010250          354 VS-PEVSEVIHSQSN---TL-G-------S---FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF  418 (514)
Q Consensus       354 ~~-~~i~~~l~~~~~---~~-~-------~---~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l  418 (514)
                      .+ +++.+.+.....   .. .       .   ...|+.+-.+.+.++.+++.|+.+++  +.++-++..++..+.|..+
T Consensus       194 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~--~~~~r~~~~~~y~~~L~~~  271 (376)
T TIGR02379       194 INDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADR--INQDRLATWQLYQDALKPL  271 (376)
T ss_pred             ECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHH--HHHHHHHHHHHHHHHhccC
Confidence            75 777777653211   00 0       0   01234444556777777777776653  4445555555566666543


Q ss_pred             c-----CCCce-eEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--------------------
Q 010250          419 S-----DSPII-GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------------------  472 (514)
Q Consensus       419 ~-----~~~~~-~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------------------  472 (514)
                      .     ..+.+ ......-.++.+.+....           ..+.+.+.|.++||.++..                    
T Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----------~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~  340 (376)
T TIGR02379       272 EEKGIIELPSIPNGCQHNAHMFYIKLKDED-----------DRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGED  340 (376)
T ss_pred             CcCCeeeCCCCCCCCeeeeEEEEEEECCcC-----------CHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCC
Confidence            1     11111 011111112344443211           1346888999999887621                    


Q ss_pred             -------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          473 -------GDNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       473 -------g~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                             .+.|.+-.....|++|++.+++.|++++
T Consensus       341 p~~~~~~~~~l~LP~~~~l~~~~~~~i~~~i~~~~  375 (376)
T TIGR02379       341 IYTTKESERLVRLPLYYGLSKEDQARVIQTICDYL  375 (376)
T ss_pred             hHHHHHHhceEEccCCCCCCHHHHHHHHHHHHHHh
Confidence                   0123333334589999999999998764

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.52  E-value=3.1e-12  Score=142.74  Aligned_cols=314  Identities=12%  Similarity=0.065  Sum_probs=193.3

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChh----HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGS----EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL  217 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGs----eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~  217 (514)
                      +.+...++.+.|++++   +++.|.|+++++    +|+..+++   .|++.+|...| ++|+...+-||+....+...|.
T Consensus       566 ~~~~~~~~r~~la~i~---g~~~v~f~pnaga~ge~a~~~vi~---~~~~~~Gd~~r-~~vli~~~aH~sn~a~a~~~G~  638 (993)
T PLN02414        566 YQEMFEDLGDLLCEIT---GFDSFSLQPNAGAAGEYAGLMVIR---AYHLSRGDHHR-NVCIIPVSAHGTNPASAAMCGM  638 (993)
T ss_pred             HHHHHHHHHHHHHHHh---CCCeEEEcCCCcHHHHHHHHHHHH---HHHhccCCCCC-CEEEeCCCcCccCHHHHHHCCC
Confidence            4566678899999997   558999987666    55555555   44444343333 4566667889986655544332


Q ss_pred             ccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHH
Q 010250          218 PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKV  297 (514)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l  297 (514)
                      ..            ..+++..             .+..++++|++++.... +++++|++.-.++.+|...|    +++|
T Consensus       639 ~v------------v~v~~d~-------------~G~vDle~L~~~i~~~~-~~ta~V~vt~pSn~gg~e~~----I~eI  688 (993)
T PLN02414        639 KI------------VVVGTDA-------------KGNINIEELRKAAEAHK-DNLAALMVTYPSTHGVYEEG----IDEI  688 (993)
T ss_pred             EE------------EEeccCC-------------CCCcCHHHHHHHHhccC-CCeEEEEEECCCccccccch----HHHH
Confidence            21            1122211             01123688888886322 46888888888888887776    9999


Q ss_pred             HHHHHhcCCEEEEechhcCcccccccceecccCCCCchhch--hhhhc----CCcccceeEEeCHHHHHHhhhccC-C--
Q 010250          298 QAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALS----SAYMPIGAILVSPEVSEVIHSQSN-T--  368 (514)
Q Consensus       298 ~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~----gG~~pig~v~~~~~i~~~l~~~~~-~--  368 (514)
                      .++|+++|+++++|-+|. .+..|   ......+..|++++  .|.|+    +|+-.+|.+.++++++..+..... .  
T Consensus       689 ~~iah~~Galv~vDgAq~-~a~~~---l~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~  764 (993)
T PLN02414        689 CDIIHDNGGQVYMDGANM-NAQVG---LTSPGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTG  764 (993)
T ss_pred             HHHHHHcCCEEEEEecCH-HhccC---cCCccccCCCEEEecCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCC
Confidence            999999999999999996 22211   11222344688877  38655    344568999999988766643210 0  


Q ss_pred             --CCccc--ccCCC----CCcHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHhhhhhccCCCceeEEEeeee-e--E
Q 010250          369 --LGSFS--HGFTY----SGHPVSCAVAIEALKIYKERNI---VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGL-I--L  434 (514)
Q Consensus       369 --~~~~~--~~~t~----~~~pl~~aaa~aal~~~~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~-~--~  434 (514)
                        .+...  ..+|.    .++.+.+.++..-+..+-.+++   .++...+..+++++|++..+..+..   ..|. +  +
T Consensus       765 ~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~---~~~~~~hEf  841 (993)
T PLN02414        765 GIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRG---KNGTCAHEF  841 (993)
T ss_pred             CcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccC---CCCCeeeeE
Confidence              00001  01232    2444555556666666655666   6677888899999997632212111   0111 1  1


Q ss_pred             EEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE----eeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          435 GTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VSGDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       435 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      .+.+..-+  ..    .......+.++|.+.|+...    |..+.+|++|....|++|||+++++|.....+..+
T Consensus       842 v~~~~~l~--~~----~g~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~  910 (993)
T PLN02414        842 IIDLRPFK--NT----AGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAD  910 (993)
T ss_pred             EEeccccc--cc----cCCCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence            12222100  00    00013568889999998865    33567999999999999999999999888776653

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.51  E-value=9.9e-13  Score=135.16  Aligned_cols=235  Identities=14%  Similarity=0.132  Sum_probs=145.6

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      .+...+|+++++++++   .+.++.++||+.|+..++....        ..++.||+..+.|++.......+.       
T Consensus        52 np~~~~lE~~lA~l~g---~~~~l~~~sG~~Ai~~~l~~ll--------~~GD~Vlv~~~~y~~~~~~~~~~~-------  113 (385)
T PRK08574         52 NPTLRPLEEALAKLEG---GVDALAFNSGMAAISTLFFSLL--------KAGDRVVLPMEAYGTTLRLLKSLE-------  113 (385)
T ss_pred             CccHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHHh--------CCCCEEEEcCCCchhHHHHHHHhh-------
Confidence            4556889999999974   3578889999999999987553        335688888888876432111110       


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++....+   ++ +                  +.+++++++.   +.++.+|++|.++++.|.+.+    +++|.++|+
T Consensus       114 ~~g~~v~~---~~-~------------------d~~~l~~~i~---~~~tklV~ie~p~NPtG~v~d----l~~I~~la~  164 (385)
T PRK08574        114 KFGVKVVL---AY-P------------------STEDIIEAIK---EGRTKLVFIETMTNPTLKVID----VPEVAKAAK  164 (385)
T ss_pred             ccCcEEEE---EC-C------------------CHHHHHHhcC---ccCceEEEEECCCCCCCEecC----HHHHHHHHH
Confidence            00100000   00 0                  1356766664   225778889999998898887    899999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccc-eeEEe-CHHHHHHhhhccCCCCcccccCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPI-GAILV-SPEVSEVIHSQSNTLGSFSHGFTY  378 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pi-g~v~~-~~~i~~~l~~~~~~~~~~~~~~t~  378 (514)
                      +||+++|+|++++ .+......   .+|  .|++  +++|.++|..-.+ |++++ ++++.+.+...       ......
T Consensus       165 ~~gi~livD~t~a-~~~~~~~l---~~G--aDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~-------~~~~g~  231 (385)
T PRK08574        165 ELGAILVVDNTFA-TPLLYRPL---RHG--ADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEW-------RRRLGT  231 (385)
T ss_pred             HcCCEEEEECCCC-ccccCChh---hhC--CcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHH-------HHhcCC
Confidence            9999999999985 22111111   123  4776  4679998732333 43555 67777766531       111234


Q ss_pred             CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCceeE----------E--EeeeeeEEEEEc
Q 010250          379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIGE----------I--RGTGLILGTEFA  439 (514)
Q Consensus       379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~~----------v--~g~g~~~~i~~~  439 (514)
                      ..+|+.++.++..|+.+..  ..++..++...+.+.|+..+     .+|...+          .  .|.|.++.|++.
T Consensus       232 ~~~p~~a~l~l~~l~tL~~--R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~  307 (385)
T PRK08574        232 IMQPFEAYLVLRGLKTLEV--RFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVK  307 (385)
T ss_pred             CCCHHHHHHHHcccCcHHH--HHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeC
Confidence            4568877777777776542  34455556666666665431     1222211          1  257889999986

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.50  E-value=1.4e-12  Score=134.40  Aligned_cols=237  Identities=14%  Similarity=0.148  Sum_probs=144.0

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      .+...+|+++|+++.+   .+..+.++||++|+..++....        ..+++||+.++.|.+.........      .
T Consensus        60 ~p~~~~Le~~lA~~~g---~~~~i~~~sG~~Ai~~~l~all--------~~Gd~Vl~~~~~y~~t~~~~~~~~------~  122 (388)
T PRK07811         60 NPTRTALEEQLAALEG---GAYGRAFSSGMAATDCLLRAVL--------RPGDHIVIPNDAYGGTFRLIDKVF------T  122 (388)
T ss_pred             CccHHHHHHHHHHHhC---CCceEEeCCHHHHHHHHHHHHh--------CCCCEEEEcCCCchHHHHHHHHhC------c
Confidence            3556789999999873   3456777899999999998664        345689998888865421110000      0


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++.   .+..++..                  +++++++.+.    +++.+|++|..++..|.+.+    +++|.++|+
T Consensus       123 ~~gi---~~~~~d~~------------------d~e~l~~~i~----~~tklV~ie~p~NPtg~~~d----l~~I~~la~  173 (388)
T PRK07811        123 RWGV---EYTPVDLS------------------DLDAVRAAIT----PRTKLIWVETPTNPLLSITD----IAALAELAH  173 (388)
T ss_pred             CCCe---EEEEeCCC------------------CHHHHHHhcC----cCCeEEEEECCCCCcceecC----HHHHHHHHH
Confidence            0110   00011110                  1466666654    35678888887777787766    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCC-cccceeEEeC-HHHHHHhhhccCCCCcccccCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSA-YMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTY  378 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG-~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~  378 (514)
                      +||+++|+||++.. +..+..     .+...|+++  ++|.++|. ....|+++++ +++.+.+...       ......
T Consensus       174 ~~gi~lIvD~a~a~-~~~~~p-----~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~-------~~~~g~  240 (388)
T PRK07811        174 DAGAKVVVDNTFAS-PYLQQP-----LALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFL-------QNGAGA  240 (388)
T ss_pred             HcCCEEEEECCCCc-cccCCc-----hhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHH-------HHhcCC
Confidence            99999999999862 222221     123457764  56999872 2345777775 6666655421       111123


Q ss_pred             CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCcee----------EEEeeeeeEEEEEcc
Q 010250          379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFAD  440 (514)
Q Consensus       379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~v~g~g~~~~i~~~~  440 (514)
                      ..+|..+..++..|+.+.  ...++..++...+.+.|++.+.     +|...          ...|.|.++.|++..
T Consensus       241 ~~s~~~a~l~~~~L~tl~--~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~  315 (388)
T PRK07811        241 VPGPFDAYLTLRGLKTLA--VRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAG  315 (388)
T ss_pred             CCCHHHHHHHHhccCcHH--HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCC
Confidence            345776666666665443  2345556677777777765321     22211          134678899999963

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.50  E-value=1.4e-12  Score=133.57  Aligned_cols=232  Identities=16%  Similarity=0.153  Sum_probs=142.7

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH  221 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~  221 (514)
                      .++...+|+++|+++.+   .+..+.++||++|+..++.+.         ..+++||+.++.|++.........      
T Consensus        50 ~~pt~~~le~~la~l~g---~~~~~~~~sG~~ai~~~~~ll---------~~Gd~Vl~~~~~y~~t~~~~~~~~------  111 (366)
T PRK08247         50 GNPTRGVLEQAIADLEG---GDQGFACSSGMAAIQLVMSLF---------RSGDELIVSSDLYGGTYRLFEEHW------  111 (366)
T ss_pred             CCchHHHHHHHHHHHhC---CCcEEEEcCHHHHHHHHHHHh---------CCCCEEEEecCCcCcHHHHHHHHh------
Confidence            34557889999999973   345788999999998776432         234689999999987421110000      


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                      ..++.   .+..++..                  +.+++++.+.    +++.+|++|..++..|.+.+    +++|.++|
T Consensus       112 ~~~G~---~v~~vd~~------------------d~~~l~~~i~----~~tklv~le~P~NP~~~~~d----l~~I~~la  162 (366)
T PRK08247        112 KKWNV---RFVYVNTA------------------SLKAIEQAIT----PNTKAIFIETPTNPLMQETD----IAAIAKIA  162 (366)
T ss_pred             hccCc---eEEEECCC------------------CHHHHHHhcc----cCceEEEEECCCCCCCcHHH----HHHHHHHH
Confidence            00110   01111110                  1456666654    35678888777666665544    99999999


Q ss_pred             HhcCCEEEEechhc-CcccccccceecccCCCCchh--chhhhhcCC-cccceeEEeC-HHHHHHhhhccCCCCcccccC
Q 010250          302 KKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLV--SFAKALSSA-YMPIGAILVS-PEVSEVIHSQSNTLGSFSHGF  376 (514)
Q Consensus       302 ~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG-~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~  376 (514)
                      ++||+++|+||++. ++  .+..     .....|++  +++|.++|. -...|+++++ +++.+.+...       ....
T Consensus       163 ~~~g~~lIvD~t~~~~~--~~~p-----~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~-------~~~~  228 (366)
T PRK08247        163 KKHGLLLIVDNTFYTPV--LQRP-----LEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYY-------QNAA  228 (366)
T ss_pred             HHcCCEEEEECCCcccc--ccCc-----hhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHH-------HHhc
Confidence            99999999999984 22  1111     11234665  578999862 2356777776 6677666521       1122


Q ss_pred             CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeE--EEeeeeeEEEEEc
Q 010250          377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGE--IRGTGLILGTEFA  439 (514)
Q Consensus       377 t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~--v~g~g~~~~i~~~  439 (514)
                      +...+|..+..++..|+.+..  ..++.+++.+.+.+.|++.   |.+..  ..+.|.++.+++.
T Consensus       229 g~~~s~~~a~l~~~~l~tl~~--r~~~~~~~a~~l~~~L~~~---p~v~~v~~P~~gg~~sf~~~  288 (366)
T PRK08247        229 GAVLSPFDSWLLIRGMKTLAL--RMRQHEENAKAIAAFLNEQ---PGVTDVLYPGRGGMLSFRLQ  288 (366)
T ss_pred             CCCCChHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHHHhC---CCeeEEecCCcCcEEEEEEC
Confidence            344567777777776664432  3445677778888877764   43333  3346888888874

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.50  E-value=1e-12  Score=134.70  Aligned_cols=237  Identities=16%  Similarity=0.147  Sum_probs=142.6

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      ++...+|+++|+++.   +.+.+++++||++|+..++....        ..+++|++.++.|.+.........      .
T Consensus        52 npt~~~Le~~lA~le---g~e~ivvt~gg~~Ai~~~l~all--------~~Gd~Il~~~~~y~~~~~~~~~~~------~  114 (388)
T PRK08861         52 NPNRGLLEQTLSELE---SGKGAVVTNCGTSALNLWVSALL--------GPDDLIVAPHDCYGGTYRLFNTRA------N  114 (388)
T ss_pred             CchHHHHHHHHHHHh---CCCeEEEECCHHHHHHHHHHHHc--------CCCCEEEEcCCchHHHHHHHHHHH------h
Confidence            455688999999987   35799999999999999997653        345678888888865321100000      0


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      ..+.   .+..++.+                  +.+++++++.    +++.+|++|.+++.+|.+.+    +++|.++|+
T Consensus       115 ~~gi---~v~~vd~~------------------d~e~l~~~i~----~~tklV~lesP~NPtG~v~d----l~~I~~la~  165 (388)
T PRK08861        115 KGDF---KVQFVDQS------------------DAAALDAALA----KKPKLILLETPSNPLVRVVD----IAELCQKAK  165 (388)
T ss_pred             cCCe---EEEEECCC------------------CHHHHHHhcC----cCCeEEEEECCCCCCCcccC----HHHHHHHHH
Confidence            0000   00000100                  1356666654    35678888888888888887    899999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhch--hhhhcCC-cccceeEEeC-HHHHHHhhhccCCCCcccccCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSA-YMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTY  378 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG-~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~  378 (514)
                      ++|+++|+||++... ..     ........|+++.  .|.++|. -...|+++++ +++.+.+...       ......
T Consensus       166 ~~gi~vIvDea~~~~-~~-----~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~-------~~~~G~  232 (388)
T PRK08861        166 AVGALVAVDNTFLTP-VL-----QKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWW-------GNCIGA  232 (388)
T ss_pred             HcCCEEEEECCcccc-cc-----CCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHH-------HhccCC
Confidence            999999999998621 11     1112234687754  5999873 1335666664 5566655421       111233


Q ss_pred             CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250          379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD  440 (514)
Q Consensus       379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~  440 (514)
                      ..+|..+...+..|+.+.-  ..++..+++..+.+.|+..+     .+|...          ...|.|.++.|++..
T Consensus       233 ~~~p~~a~l~~rgl~Tl~l--R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~  307 (388)
T PRK08861        233 TGTPFDSYMTLRGIRTLGA--RMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAG  307 (388)
T ss_pred             CCChHHHHHHHhcCCCHHH--HHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCC
Confidence            4567777766665554431  13444555555555555421     122111          134678899999863

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.50  E-value=1.5e-12  Score=134.68  Aligned_cols=239  Identities=15%  Similarity=0.131  Sum_probs=144.9

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      .+...++++.|+++.+   .+..+.++||+.|+..+++...        ..+++||+..+.| |.+.......     ..
T Consensus        64 ~p~~~~le~~lA~l~g---~~~~i~~~sG~~Al~~~l~~ll--------~~Gd~Viv~~~~y-~~t~~~~~~~-----~~  126 (403)
T PRK07503         64 NPTLALLEQRMASLEG---GEAAVALASGMGAITATLWTLL--------RPGDEVIVDQTLY-GCTFAFLHHG-----LG  126 (403)
T ss_pred             CchHHHHHHHHHHHhC---CCcEEEEcCHHHHHHHHHHHHc--------CCCCEEEEccCcc-chHHHHHHHH-----Hh
Confidence            3456789999999874   3457888899999999987542        2346788877766 3322111000     00


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++.   .+..++..                  +.+++++.+.    +++.+|++|.+++..|.+.+    +++|.++|+
T Consensus       127 ~~G~---~v~~vd~~------------------d~~~l~~~i~----~~tklV~le~p~NPtG~~~d----i~~I~~la~  177 (403)
T PRK07503        127 EFGV---TVRHVDLT------------------DPAALKAAIS----DKTRMVYFETPANPNMRLVD----IAAVAEIAH  177 (403)
T ss_pred             hCCE---EEEEeCCC------------------CHHHHHHhcC----ccCcEEEEeCCCCCCCeeeC----HHHHHHHHH
Confidence            0110   01111110                  1366666664    35678888888888888876    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcC-CcccceeEEeCHHHHHHhhhccCCCCcccccCCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSS-AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS  379 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~g-G~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~  379 (514)
                      +||+++|+|+++.. +..+..     .+...|++  +++|.++| |....|+++.++++++.+....     ........
T Consensus       178 ~~gi~lIvD~a~a~-~~~~~~-----l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~~~~-----~~~~~g~~  246 (403)
T PRK07503        178 GAGAKVVVDNTYCT-PYLQRP-----LELGADLVVHSATKYLGGHGDITAGLVVGGKALADRIRLEG-----LKDMTGAV  246 (403)
T ss_pred             HcCCEEEEECCCcc-cccCCc-----hhhCCCEEEccccccccCCCceeEEEEEcCHHHHHHHHhhh-----HHhCcCCC
Confidence            99999999999973 222222     22345766  46799987 3355788888888887775210     01112355


Q ss_pred             CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250          380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD  440 (514)
Q Consensus       380 ~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~  440 (514)
                      .+|+.++.++..|+.+..  ..++..++...+.+.|++..     .+|...          ...+.|.++.+++..
T Consensus       247 ~s~~~a~l~l~~L~tl~~--r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~  320 (403)
T PRK07503        247 MSPFDAFLLMRGLKTLAL--RMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKG  320 (403)
T ss_pred             CCHHHHHHHHcCcchHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECC
Confidence            678888888777776542  23334455555556555431     112111          123567788888753

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.50  E-value=1.2e-12  Score=134.02  Aligned_cols=235  Identities=12%  Similarity=0.160  Sum_probs=143.5

Q ss_pred             chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250          144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK  223 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~  223 (514)
                      +...+|+++|+++..   -+.+++++||++|+..++...+        ..+++||+.++.|.+........   .   ..
T Consensus        61 pt~~~Le~~iA~le~---~~~~~~~~sG~~Ai~~~l~all--------~~GD~Vvv~~~~Y~~t~~l~~~~---l---~~  123 (394)
T PRK09028         61 PTHFAFQAAIVELEG---GAGTALYPSGAAAISNALLSFL--------KAGDHLLMVDSCYEPTRDLCDKI---L---KG  123 (394)
T ss_pred             chHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEECCCcHHHHHHHHHh---h---hh
Confidence            345689999998853   2468999999999999987553        34578999999986653211000   0   00


Q ss_pred             CCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 010250          224 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK  303 (514)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~  303 (514)
                      ++..   +..++.          .        +.+.+++++.    +++.+|++|.+.+..|.+.+    +++|.++|++
T Consensus       124 ~Gi~---v~~v~~----------~--------~~e~l~~~l~----~~TklV~lespsNPtg~v~d----l~~I~~la~~  174 (394)
T PRK09028        124 FGIE---TTYYDP----------M--------IGEGIRELIR----PNTKVLFLESPGSITMEVQD----VPTLSRIAHE  174 (394)
T ss_pred             cceE---EEEECC----------C--------CHHHHHHhcC----cCceEEEEECCCCCCCcHHH----HHHHHHHHHH
Confidence            1100   000000          0        0245666553    45789999999888888766    9999999999


Q ss_pred             cCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCC-cccceeEEeCHHHHHHhhhccCCCCcccccCCCCC
Q 010250          304 YDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSA-YMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG  380 (514)
Q Consensus       304 ~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG-~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~  380 (514)
                      ||+++|+|++|+.    +  ..+.......|+++  ..|.++|. -.-.|+++.++++.+.+....     ...|  ...
T Consensus       175 ~g~~lvvD~t~a~----p--~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~-----~~~G--~~~  241 (394)
T PRK09028        175 HDIVVMLDNTWAS----P--INSRPFEMGVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREHS-----YLMG--QCT  241 (394)
T ss_pred             cCCEEEEECCccc----c--ccCCccccCceEEEEeCCeEecCCCCEEEEEEECCHHHHHHHHHHH-----HhcC--CCC
Confidence            9999999999962    1  12333344568876  45999873 233455666777766554210     0112  235


Q ss_pred             cHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEc
Q 010250          381 HPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFA  439 (514)
Q Consensus       381 ~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~  439 (514)
                      +|..|...+..|+.+.-  ..++..+++..+.+.|++.+     .+|...          ...|.|.++.|++.
T Consensus       242 ~p~~a~l~~rgl~TL~l--R~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~  313 (394)
T PRK09028        242 SPDDVYLAMRGLRTLGV--RLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLK  313 (394)
T ss_pred             CHHHHHHHHcccCcHHH--HHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEEC
Confidence            67777766665554431  24555556666666665431     122111          13467889999986

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.49  E-value=2e-12  Score=134.46  Aligned_cols=244  Identities=16%  Similarity=0.171  Sum_probs=147.5

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      .+...+|+++|+++.+   .+.+++++||++|+..++....        ...++||+....|+|........  .+    
T Consensus        57 ~pt~~~Le~~lA~l~g---~~~~l~~ssG~~Ai~~al~al~--------~~Gd~Vl~~~~~Y~~t~~~~~~~--l~----  119 (425)
T PRK06084         57 NPTNDVLEQRVAALEG---GVGALAVASGMAAITYAIQTIA--------EAGDNIVSVAKLYGGTYNLLAHT--LP----  119 (425)
T ss_pred             CchHHHHHHHHHHHhC---CCceeEehhHHHHHHHHHHHHh--------CCCCEEEEeCCCcchHHHHHHHh--cc----
Confidence            3456789999999873   3568899999999999998664        23468999999998743211100  00    


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++.   .+..++.                  .+.+++++.+.    +++++|++|.+++..|.+.+    +++|.++|+
T Consensus       120 ~~gi---~v~~~d~------------------~d~e~le~ai~----~~tklV~lesp~NPtG~v~d----l~~I~~la~  170 (425)
T PRK06084        120 RIGI---ETRFAAH------------------DDIAALEALID----ERTKAVFCESIGNPAGNIID----IQALADAAH  170 (425)
T ss_pred             ccee---EEEEECC------------------CCHHHHHHHhc----cCCcEEEEeCCCCCCCeecC----HHHHHHHHH
Confidence            0010   0000110                  01467777764    35678888999888998887    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccceeEEeC-HHHH-HHhhhcc----C----C--
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILVS-PEVS-EVIHSQS----N----T--  368 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~~-~~i~-~~l~~~~----~----~--  368 (514)
                      +||+++|+||+++ .+...     .......|++  +++|.++|....+|++++. +.+. .......    .    .  
T Consensus       171 ~~~i~vVvD~a~a-~~~~~-----~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (425)
T PRK06084        171 RHGVPLIVDNTVA-TPVLC-----RPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHG  244 (425)
T ss_pred             HcCCEEEEECCCc-ccccC-----ChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCccccc
Confidence            9999999999996 32221     2223346877  5679999855778876663 3210 0100000    0    0  


Q ss_pred             ------CC----------cccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCceeE-
Q 010250          369 ------LG----------SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIGE-  426 (514)
Q Consensus       369 ------~~----------~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~~-  426 (514)
                            .+          ....+.....+|..+...+..|+.+..  ..++..++...+.+.|++.+.     +|.... 
T Consensus       245 ~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~--R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~  322 (425)
T PRK06084        245 VTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLAL--RMERHTENALKVARYLQQHPQVAWVKYAGLPDH  322 (425)
T ss_pred             chhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHH--HHHHHHHHHHHHHHHHHhCCCccEEECCCCCCc
Confidence                  00          001122344567777777766665532  355666666677777765421     222111 


Q ss_pred             ---------EEe-eeeeEEEEEcc
Q 010250          427 ---------IRG-TGLILGTEFAD  440 (514)
Q Consensus       427 ---------v~g-~g~~~~i~~~~  440 (514)
                               ..| .|.++.|++..
T Consensus       323 p~~~~~~~~~~g~~gg~~s~~~~~  346 (425)
T PRK06084        323 PEHELARRYMGGKPASILSFGIKG  346 (425)
T ss_pred             ccHHHHHHhCCCCcceEEEEEecC
Confidence                     234 68899999863

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.49  E-value=1.1e-11  Score=139.00  Aligned_cols=316  Identities=13%  Similarity=0.121  Sum_probs=181.1

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEe-CChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFT-NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH  221 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~-~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~  221 (514)
                      .....++.+.|++++   +++.+.+. ++|+.|+.+++..++.|+..++..+|++ +....+-||+...++...|...  
T Consensus       541 l~~i~e~q~~l~elt---G~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~-vlis~~aH~snp~sa~~~G~~v--  614 (954)
T PRK05367        541 RELIDQLEAWLAEIT---GYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDV-CLIPSSAHGTNPASAVMAGMKV--  614 (954)
T ss_pred             HHHHHHHHHHHHHHH---CCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCE-EEEEchhhhhhHHHHHHCCCEE--
Confidence            355667888888887   45566664 5778888788878888876666544444 5555677776544443333221  


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                                ..+++...             ...+.++|++.+... ..++++|++--... .|.+..+   +++|.++|
T Consensus       615 ----------v~v~~d~~-------------G~iD~~~L~~~i~~~-~~~la~V~it~pst-~G~~e~~---I~eI~~i~  666 (954)
T PRK05367        615 ----------VVVACDEN-------------GNIDLDDLRAKAEEH-ADNLAAIMITYPST-HGVFEET---IREICEIV  666 (954)
T ss_pred             ----------EEECCCCC-------------CCcCHHHHHHHHhcc-CCCeEEEEEEcCCC-CeeecCC---HHHHHHHH
Confidence                      11222110             112257888777532 23566665544333 3554333   99999999


Q ss_pred             HhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhc----CCcccceeEEeCHHHHHHhhhccCCCCcccc-
Q 010250          302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALS----SAYMPIGAILVSPEVSEVIHSQSNTLGSFSH-  374 (514)
Q Consensus       302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~----gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~-  374 (514)
                      +++|+++++|.++.+ +-.+.   ...-....|+++++  |.|+    +|+-.+|.+++++.+...+............ 
T Consensus       667 h~~G~~v~VDgA~~~-al~~l---~~pg~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~  742 (954)
T PRK05367        667 HEHGGQVYLDGANMN-AQVGL---ARPGDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETG  742 (954)
T ss_pred             HHcCCEEEEECcChh-hccCC---CChhhcCCCEEEecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCC
Confidence            999999999999962 11211   01112346888776  8764    4445577888887766555432100000000 


Q ss_pred             cCCCCCcHH----HHHHHHHHHHHHhhccHHHHHH---HHHHHHHhhhhhccCCCcee---EEEeeeeeEEEEEccCCCC
Q 010250          375 GFTYSGHPV----SCAVAIEALKIYKERNIVEQVN---KIAPKFQDGVKAFSDSPIIG---EIRGTGLILGTEFADNKSP  444 (514)
Q Consensus       375 ~~t~~~~pl----~~aaa~aal~~~~~~~~~~~~~---~~~~~l~~~L~~l~~~~~~~---~v~g~g~~~~i~~~~~~~~  444 (514)
                      .++....+.    .+..+...+..+-.+++.+..+   .+.+++.++|++.-+....+   .+. ..  +.+++...+..
T Consensus       743 ~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~-~e--~i~~~~~~~~~  819 (954)
T PRK05367        743 IGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVLYTGANGRVA-HE--CILDLRPLKES  819 (954)
T ss_pred             cCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCccccCCCCCcc-cc--eEEEeeccccc
Confidence            011222233    2222334444454556665555   78889999887641111111   000 01  12222211100


Q ss_pred             CCCCCCccchHHHHHHHHHHCCcEEEe----eCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          445 NEPFPPEWGIGAYFGAQCEKHGMLVRV----SGDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       445 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~----~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      .      ......+.++|.+.|+....    ..+.++++|....|++|||+++++|.....++.+
T Consensus       820 ~------g~~~~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~  878 (954)
T PRK05367        820 T------GITVDDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE  878 (954)
T ss_pred             C------CCCHHHHHHHHHHCCCeEeecCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence            0      00145688999999998764    2467999999999999999999999888776654

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.49  E-value=1.5e-12  Score=132.66  Aligned_cols=230  Identities=19%  Similarity=0.150  Sum_probs=144.8

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      ++...+|+++|+++.   +.+.++.++||++|+..++.+.         ..+++||+....|++....... .     ..
T Consensus        53 ~p~~~~le~~lA~le---g~~~~v~~~sG~aAi~~~l~~l---------~~GD~VI~~~~~yg~~~~~~~~-~-----~~  114 (364)
T PRK07269         53 NPTRAKLEETLAAIE---SADYALATSSGMSAIVLAFSVF---------PVGSKVVAVRDLYGGSFRWFNQ-Q-----EK  114 (364)
T ss_pred             CccHHHHHHHHHHHh---CCCeEEEeCCHHHHHHHHHHHh---------CCCCEEEEecCCcCchHHHHHH-H-----Hh
Confidence            355688999999987   4568999999999999998533         2346888888877554211000 0     00


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++.      .+.                +. .+.+++++.+.    +++.+|++|...+..|.+.+    +++|.++|+
T Consensus       115 ~~~~------~~~----------------~~-~d~~~l~~~i~----~~TklV~lesP~NPtg~~~d----i~~I~~la~  163 (364)
T PRK07269        115 EGRF------HFT----------------YA-NTEEELIAAIE----EDTDIVYIETPTNPLMVEFD----IEKVAKLAH  163 (364)
T ss_pred             cCcE------EEE----------------ec-CCHHHHHHhcC----cCceEEEEECCCCCCCeeeC----HHHHHHHHH
Confidence            0000      000                00 01356666664    35678888888777787776    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCc-ccceeEEe-CHHHHHHhhhccCCCCcccccCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAY-MPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTY  378 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~-~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~  378 (514)
                      ++|+++|+||++..- .     .....+...|++++|  |.++|.. .-.|++++ ++++.+.+...       ......
T Consensus       164 ~~gi~vvvD~t~~~~-~-----~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~-------~~~~G~  230 (364)
T PRK07269        164 AKGAKVIVDNTFYSP-I-----YQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYN-------LNTTGA  230 (364)
T ss_pred             HcCCEEEEECCCccc-c-----cCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHH-------HHHhCC
Confidence            999999999996411 1     112234457888655  9888621 12355666 46676666421       111124


Q ss_pred             CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEE--EeeeeeEEEEEc
Q 010250          379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI--RGTGLILGTEFA  439 (514)
Q Consensus       379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v--~g~g~~~~i~~~  439 (514)
                      ..+|+.++.++..|+.+.  ...++..++...+.+.|+..   |.+..+  +|.|.++.|++.
T Consensus       231 ~~s~~~a~l~~~~L~tL~--~r~~~~~~na~~~a~~L~~~---p~v~~v~ypg~gg~~sf~~~  288 (364)
T PRK07269        231 VLSPFDSYLLMRGLKTLS--LRMERSTANAQEVVAFLKKS---PAVKEVLYTGKGGMISFKVA  288 (364)
T ss_pred             CCCHHHHHHHHcCCCcHH--HHHHHHHHHHHHHHHHHHhC---CCccEEeCCCcCcEEEEEEC
Confidence            567888888887777653  23556667777777777643   433332  467888899885

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.48  E-value=2e-12  Score=134.46  Aligned_cols=160  Identities=18%  Similarity=0.175  Sum_probs=111.1

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP  218 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~  218 (514)
                      ..+...+|+++|+++.+   .+.+++++||++|+..++....        ..+++||+....|+|.....   +...|..
T Consensus        55 ~~p~~~~le~~lA~l~g---~~~~v~~~sG~~Ai~~al~~l~--------~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~  123 (418)
T TIGR01326        55 MNPTTDVLEQRIAALEG---GVAALAVASGQAAITYAILNLA--------QAGDNIVSSSYLYGGTYNLFKHTLKRLGIE  123 (418)
T ss_pred             CChhHHHHHHHHHHHhC---CCeEEEEccHHHHHHHHHHHHh--------CCCCEEEEECCCcHHHHHHHHHHHHHcCcE
Confidence            34556899999999973   4679999999999999998664        23468899888887742111   0111110


Q ss_pred             cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ  298 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~  298 (514)
                                  +..++..                  +.+++++.+.    +++++|++|.+++..|.+.+    +++|.
T Consensus       124 ------------v~~v~~~------------------d~~~l~~~l~----~~t~~V~le~p~NPtg~v~d----l~~I~  165 (418)
T TIGR01326       124 ------------VRFVDPD------------------DPEEFEKAID----ENTKAVFAETIGNPAINVPD----IEAIA  165 (418)
T ss_pred             ------------EEEECCC------------------CHHHHHHhcC----cCCeEEEEECCCCCCCeecC----HHHHH
Confidence                        0011100                  1466766664    35678889998888888876    99999


Q ss_pred             HHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccceeEEeCH
Q 010250          299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILVSP  356 (514)
Q Consensus       299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~~~  356 (514)
                      ++|++||+++|+||++. .+.     ........+|++  +++|.++|.++++|++++++
T Consensus       166 ~la~~~~i~livD~t~~-~~~-----~~~~l~~g~Divv~S~sK~l~g~G~~lGg~v~~~  219 (418)
T TIGR01326       166 EVAHAHGVPLIVDNTFA-TPY-----LCRPIDHGADIVVHSATKYIGGHGTAIGGVIVDG  219 (418)
T ss_pred             HHHHHcCCEEEEECCCc-hhh-----cCCchhcCCeEEEECccccccCCccceEEEEEec
Confidence            99999999999999986 221     122223346877  57899998558999988854

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.48  E-value=3.5e-12  Score=130.00  Aligned_cols=321  Identities=12%  Similarity=0.058  Sum_probs=186.2

Q ss_pred             CCHHHHHHHHHHHhcCC---cc-ccccccCC---chHHHHHHHHHHhcCc-CCCCeEEEeCChhHHHHHHHHHHHHHHhh
Q 010250          117 SEPRLVAAATAQLNTLP---FY-HSFWNRTT---KPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNA  188 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~---~~-~~~~~~~~---~~~~ela~~L~~~~~~-~~~~~v~~~~sGseA~~~Alk~a~~~~~~  188 (514)
                      -+++|++|+...+.+..   .+ +.......   +...+..++|.+++.. .+.+-+++.+||+.|+|+++.-..     
T Consensus        14 ~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~-----   88 (360)
T PRK05355         14 LPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLL-----   88 (360)
T ss_pred             CCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcC-----
Confidence            47899999998874320   00 00101112   5667788888888853 222334556899999999987543     


Q ss_pred             cCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHH-HHHHh
Q 010250          189 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED-LILKE  267 (514)
Q Consensus       189 ~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~-li~~~  267 (514)
                         ...++++....+..|....-+.-        .++.  .  ..+..+..|....            ..++++ .+.  
T Consensus        89 ---~~g~~~l~i~~G~fg~r~~~~a~--------~~g~--~--~~~~~~~~~g~~~------------~~~~~~~~l~--  139 (360)
T PRK05355         89 ---GGGKKADYVDTGSWSKKAIKEAK--------KYGE--V--NVAASSEDDGFTY------------IPPLDEWQLS--  139 (360)
T ss_pred             ---CCCCeEEEEECCHHHHHHHHHHH--------HhCC--c--eEEecccccCCCC------------CCChhhccCC--
Confidence               23356777777776754322110        0110  0  0011111011000            112222 232  


Q ss_pred             CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCC
Q 010250          268 GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSA  345 (514)
Q Consensus       268 ~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG  345 (514)
                        +++.+|.+-..-..+|++.|+   +++|      ||+++|+|-|++ +|..  ....+.+    |++++|  |+++ .
T Consensus       140 --~~~~~V~~th~eTstGv~~~~---i~~i------~g~l~vVDavss-~g~~--~idv~~~----d~~~~ssqK~lg-P  200 (360)
T PRK05355        140 --DDAAYVHYTSNETIDGTEFHE---LPDT------GDVPLVADMSSD-ILSR--PIDVSKF----GLIYAGAQKNIG-P  200 (360)
T ss_pred             --CCCCEEEEccCCCcceEecCc---cccc------CCCcEEEEcCcc-ccCc--cCCHHHc----cEEEEecccccc-C
Confidence              245566666666777888643   5555      899999999998 5422  2222322    566666  9884 4


Q ss_pred             cccceeEEeCHHHHHHhhhc-cCCCC--c-ccccCCC-CCcHHHHHHHHHHHHHHhhc-c---HHHHHHHHHHHHHhhhh
Q 010250          346 YMPIGAILVSPEVSEVIHSQ-SNTLG--S-FSHGFTY-SGHPVSCAVAIEALKIYKER-N---IVEQVNKIAPKFQDGVK  416 (514)
Q Consensus       346 ~~pig~v~~~~~i~~~l~~~-~~~~~--~-~~~~~t~-~~~pl~~aaa~aal~~~~~~-~---~~~~~~~~~~~l~~~L~  416 (514)
                       ..+|++++++++.+.+.+. .....  . .....++ +.|-....+..++|+.+.++ +   +.++.+++.++++++|+
T Consensus       201 -~Glg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~  279 (360)
T PRK05355        201 -AGLTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAID  279 (360)
T ss_pred             -CceEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHH
Confidence             4589999999998877541 10000  0 0111222 33444555666788888765 3   56788888889999998


Q ss_pred             hccCCCceeE-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CCEEEEeCCCCCCHHHHHHH
Q 010250          417 AFSDSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDNIMMSPPFIMSPEEVDEL  492 (514)
Q Consensus       417 ~l~~~~~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~iRi~p~~~~t~e~id~~  492 (514)
                      ++.-...... -...+.+..|.+++..           ....+...+.++|+.+...   .+.+|+++...+|+|||+++
T Consensus       280 ~~~~~~~~~~~~~rs~~v~sf~~~~~~-----------~~~~~~~~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l  348 (360)
T PRK05355        280 SSDFYRNPVAPEDRSRMNVPFTLADEE-----------LDKKFLAEAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQAL  348 (360)
T ss_pred             hCCCcccCCChhhcCCcEEEEEcCChH-----------HHHHHHHHHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHH
Confidence            8731111011 0112345566544320           1234656788899998443   24699999999999999999


Q ss_pred             HHHHHHHHHH
Q 010250          493 ISKYGKALKA  502 (514)
Q Consensus       493 ~~~l~~~l~~  502 (514)
                      ++.|++.++.
T Consensus       349 ~~~l~~~~~~  358 (360)
T PRK05355        349 VDFMKEFERR  358 (360)
T ss_pred             HHHHHHHHHh
Confidence            9999997753

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.48  E-value=4.3e-12  Score=128.73  Aligned_cols=321  Identities=11%  Similarity=0.031  Sum_probs=184.4

Q ss_pred             CHHHHHHHHHHHhcCCcc----ccccccCC---chHHHHHHHHHHhcCcCCCCeEEEe-CChhHHHHHHHHHHHHHHhhc
Q 010250          118 EPRLVAAATAQLNTLPFY----HSFWNRTT---KPSLDLAKELLEMFTASKMAKVFFT-NSGSEANDTQVKLVWYYNNAL  189 (514)
Q Consensus       118 ~p~v~~A~~~~l~~~~~~----~~~~~~~~---~~~~ela~~L~~~~~~~~~~~v~~~-~sGseA~~~Alk~a~~~~~~~  189 (514)
                      +..|++|+.+.+......    +.......   +...+..+.|.+++....-.+|+|+ +|||+|+|+++....      
T Consensus         4 p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~------   77 (349)
T TIGR01364         4 PEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLL------   77 (349)
T ss_pred             CHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC------
Confidence            567888988887642211    11111122   4556677888888853222457666 569999999997653      


Q ss_pred             CCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250          190 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP  269 (514)
Q Consensus       190 ~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~  269 (514)
                        .+.++++....++.|....-+...        ++.    +..+..++.+  ++ ++         ..+++....  . 
T Consensus        78 --~~~~~~l~i~~G~fg~r~~~~a~~--------~g~----~~~~~~~~~~--~~-~~---------~~~~~~~~~--~-  128 (349)
T TIGR01364        78 --AEGKVADYIVTGAWSKKAAKEAKK--------YGV----VNVVASGKEG--NY-TK---------IPDPSTWEI--S-  128 (349)
T ss_pred             --CCCCeEEEEECCHHHHHHHHHHHH--------hCC----cEEEeccccC--CC-CC---------CCCHHhcCC--C-
Confidence              234677777777777643221110        110    0000000000  00 00         012222111  1 


Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcc
Q 010250          270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYM  347 (514)
Q Consensus       270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~  347 (514)
                      .++.+|.+-..-..+|+..+         ++++.+++++++|-|++ +|..  ..-.+.    -|++++|  |+++ . .
T Consensus       129 ~~~~~v~~th~ETstGv~~~---------~l~~~~~~l~iVDavss-~g~~--~id~~~----~d~~~~ssqK~lg-P-~  190 (349)
T TIGR01364       129 EDAAYVHYCANETIHGVEFR---------ELPDVKNAPLVADMSSN-ILSR--PIDVSK----FGLIYAGAQKNIG-P-A  190 (349)
T ss_pred             CCCCEEEEcCCCCcccEecc---------eecccCCCeEEEEcccc-ccCc--cCCHHH----ccEEEEecccccC-C-C
Confidence            24556666666666677653         66777899999999998 5322  222222    2466665  9884 3 4


Q ss_pred             cceeEEeCHHHHHHhhhccCCCCcc----cccCCC-CCcHHHHHHHHHHHHHHhhc-c---HHHHHHHHHHHHHhhhhhc
Q 010250          348 PIGAILVSPEVSEVIHSQSNTLGSF----SHGFTY-SGHPVSCAVAIEALKIYKER-N---IVEQVNKIAPKFQDGVKAF  418 (514)
Q Consensus       348 pig~v~~~~~i~~~l~~~~~~~~~~----~~~~t~-~~~pl~~aaa~aal~~~~~~-~---~~~~~~~~~~~l~~~L~~l  418 (514)
                      .+|.+++++++.+.+.+.......+    ....++ +.|-....+..++|+.+.++ +   +.++.+++.++++++|+++
T Consensus       191 Glg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~  270 (349)
T TIGR01364       191 GLTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNS  270 (349)
T ss_pred             ceEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            5899999999988775421111100    112333 33444555566788888765 3   4677788888898888887


Q ss_pred             cCC-CceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CEEEEeCCCCCCHHHHHHHH
Q 010250          419 SDS-PIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEVDELI  493 (514)
Q Consensus       419 ~~~-~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~iRi~p~~~~t~e~id~~~  493 (514)
                      ... ...... .....++.+.+++.           .....+...+.++|+.+.+..   +.+|+++...+|+||||.++
T Consensus       271 ~gl~~~~~~~~~rs~~v~sf~~~~~-----------~~~~~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~  339 (349)
T TIGR01364       271 NGFYRNPVDPRNRSRMNVVFTLGNE-----------ELEKRFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALV  339 (349)
T ss_pred             CCeeccCCCHHHcCCeEEEEecCCh-----------hHhHHHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHH
Confidence            322 111110 11224455554432           112446568889999555432   46999999999999999999


Q ss_pred             HHHHHHHHH
Q 010250          494 SKYGKALKA  502 (514)
Q Consensus       494 ~~l~~~l~~  502 (514)
                      +.|++.+++
T Consensus       340 ~al~~~~~~  348 (349)
T TIGR01364       340 DFMKEFQKK  348 (349)
T ss_pred             HHHHHHHHh
Confidence            999986653

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=99.48  E-value=2.6e-11  Score=113.99  Aligned_cols=312  Identities=15%  Similarity=0.131  Sum_probs=173.9

Q ss_pred             CchHHHHHHHHHHhcCc-CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250          143 TKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH  221 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~-~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~  221 (514)
                      ......+++.+.+.++. ...+.+.+||+.-.|.-.+..+.-.+. ..| ..|+.++-..+-|-|+....+.-.-...++
T Consensus        77 ~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~-sdG-~~k~illPLaPeYiGY~d~~l~~d~fVs~k  154 (417)
T COG3977          77 AVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRR-SDG-TEKKILLPLAPEYIGYADAGLEEDLFVSAK  154 (417)
T ss_pred             hHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCcc-CCC-cceeEeeccChhhccccccccCccceeecc
Confidence            34455667777766643 234678889977777766666553221 111 123334446888888754433211111111


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                             |.....+ ...|+|+.+           ++.|+-      .+.+++|++.-..+.+|.+. .++.+.+|.+|+
T Consensus       155 -------P~iel~~-~g~FKY~vD-----------F~~l~i------~e~~g~ic~SRPtNPTGNVl-TdeE~~kldalA  208 (417)
T COG3977         155 -------PNIELLP-AGQFKYHVD-----------FEHLHI------GESTGAICVSRPTNPTGNVL-TDEELAKLDALA  208 (417)
T ss_pred             -------CCccccc-ccceeeccC-----------HHHccc------ccccceEEecCCCCCCCCcc-cHHHHHHHHHHh
Confidence                   1111111 222333211           222221      25688888877766667554 678999999999


Q ss_pred             HhcCCEEEEechhcCcccccccceecccCCCCchh---chhh-hhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCC
Q 010250          302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV---SFAK-ALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT  377 (514)
Q Consensus       302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv---~~sK-~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t  377 (514)
                      ++||+.||.|.+|. .-..|--|.-...-..+.|+   ++|| +|.|  .++|.++++++++..+.....-  ...+.+.
T Consensus       209 ~~~giPliIDnAYg-~PFP~iifsd~~~~w~~NiilC~SLSK~GLPG--~R~GIiIane~viqaitnmn~i--isLap~~  283 (417)
T COG3977         209 RQHGIPLIIDNAYG-VPFPGIIFSDATPLWNENIILCMSLSKLGLPG--SRCGIIIANEKVIQAITNMNGI--ISLAPGR  283 (417)
T ss_pred             hhcCCcEEEecccC-CCCCceecccccccCCCCEEEEeehhhcCCCC--cceeEEEccHHHHHHHHhccce--eeecCCC
Confidence            99999999999985 42222222111112234554   4678 7776  8999999999999988742210  0011112


Q ss_pred             CCCcHHHHHHHHHHHH-----HHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeE-EEEEccCCCCCCCCCC
Q 010250          378 YSGHPVSCAVAIEALK-----IYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLIL-GTEFADNKSPNEPFPP  450 (514)
Q Consensus       378 ~~~~pl~~aaa~aal~-----~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~-~i~~~~~~~~~~~~~~  450 (514)
                           ++.|.+...++     .+.++-+..-.+.+.+...+.|++. ...+.. --++.|.++ ++-|.+-..+      
T Consensus       284 -----~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~-iHkpEGAIFlWLWf~dLPIt------  351 (417)
T COG3977         284 -----MGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCL-IHKPEGAIFLWLWFKDLPIT------  351 (417)
T ss_pred             -----ccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcccee-eecCCcceeehhhhccCCCC------
Confidence                 22222222221     2222222222333333333333322 222322 234566654 4445442211      


Q ss_pred             ccchHHHHHHHHHHCCcEEEeeC--------------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          451 EWGIGAYFGAQCEKHGMLVRVSG--------------DNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       451 ~~~~~~~~~~~l~~~Gv~~~~~g--------------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                          .+.+.++|+++|+++.|+.              .++||+  +.-++++|+..+.+|.+.+++.-+
T Consensus       352 ----t~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn--~~~~~~~ie~Gva~lae~ve~~yq  414 (417)
T COG3977         352 ----TEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMN--YVPEPEKIEKGVAILAEEVERAYQ  414 (417)
T ss_pred             ----HHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEe--cCCCHHHHHHHHHHHHHHHHHHHh
Confidence                4568899999999998752              579999  899999999999999988876543

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.47  E-value=3.9e-11  Score=123.42  Aligned_cols=310  Identities=13%  Similarity=0.104  Sum_probs=176.6

Q ss_pred             HHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEE
Q 010250          119 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI  198 (514)
Q Consensus       119 p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii  198 (514)
                      ++-.+++.+.+.....+     +..+...++++++++.+   +.+++++++||++|+..++..+.      . ..++.||
T Consensus        11 ~~~~~~~~~~l~~~~~~-----g~~~~~~~~e~~la~~~---g~~~~v~~~sgt~al~~~l~~~~------~-~~Gd~Vi   75 (375)
T PRK11706         11 GTELDYIQQAMSSGKLC-----GDGGFTRRCQQWLEQRF---GSAKVLLTPSCTAALEMAALLLD------I-QPGDEVI   75 (375)
T ss_pred             HHHHHHHHHHHHcCCcc-----CCCHHHHHHHHHHHHHh---CCCeEEEECCHHHHHHHHHHHhC------C-CCCCEEE
Confidence            34466777777654321     12345678888898886   45789999999999998876541      1 2356899


Q ss_pred             EEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEE
Q 010250          199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIA  277 (514)
Q Consensus       199 ~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aaviv  277 (514)
                      +...+|.+........+..+.+             ++.. +.|             ..+.+++++.+.   + ++.+|++
T Consensus        76 v~~~t~~~~~~~~~~~G~~~v~-------------~d~d~~~~-------------~~d~~~le~~i~---~-~tk~i~~  125 (375)
T PRK11706         76 MPSYTFVSTANAFVLRGAKIVF-------------VDIRPDTM-------------NIDETLIEAAIT---P-KTRAIVP  125 (375)
T ss_pred             ECCCCcHHHHHHHHHcCCEEEE-------------EecCCCcC-------------CcCHHHHHHhcC---C-CCeEEEE
Confidence            9888887654332222211111             1110 000             112467777664   2 3445553


Q ss_pred             ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc--cccceecccCCCCchhchh----hhhcCCccccee
Q 010250          278 EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL--GTMFGCDKYSIKPDLVSFA----KALSSAYMPIGA  351 (514)
Q Consensus       278 Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~--G~~~~~~~~gv~pDiv~~s----K~l~gG~~pig~  351 (514)
                        ++ ..|...+    +++|.++|++||+++|.|++|+ +|..  |..     .|---|+.+||    |.++.| ...++
T Consensus       126 --~~-~~G~~~~----~~~i~~la~~~~i~vIeD~a~a-~g~~~~~~~-----~g~~~~~~~~Sf~~~K~l~~g-~gG~~  191 (375)
T PRK11706        126 --VH-YAGVACE----MDTIMALAKKHNLFVVEDAAQG-VMSTYKGRA-----LGTIGHIGCFSFHETKNYTAG-EGGAL  191 (375)
T ss_pred             --eC-CCCCccC----HHHHHHHHHHcCCEEEEECccc-cccccCCee-----eecCcCEEEEeCCCCcccccc-CCeEE
Confidence              22 3565554    8999999999999999999997 5432  211     12223777777    988755 33344


Q ss_pred             EEeCHHHHHHhhhccCC---CCc-----------ccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhh
Q 010250          352 ILVSPEVSEVIHSQSNT---LGS-----------FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA  417 (514)
Q Consensus       352 v~~~~~i~~~l~~~~~~---~~~-----------~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~  417 (514)
                      +..++++.+.+..-.+.   ...           ...|.++-.+.+.++.+++-|+.++  ...++-+++.+++.+.|..
T Consensus       192 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~--~~~~~R~~~~~~~~~~L~~  269 (375)
T PRK11706        192 LINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAAD--RINQRRLALWQRYYDALAP  269 (375)
T ss_pred             EECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcC
Confidence            44567777654421100   000           0123344445677777777776653  3455566666777777765


Q ss_pred             ccCCCce------eEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----------------C-
Q 010250          418 FSDSPII------GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----------------G-  473 (514)
Q Consensus       418 l~~~~~~------~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----------------g-  473 (514)
                      +...+.+      ........++.+.+.+..           ....+.+.|.++||.++..                 + 
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~  338 (375)
T PRK11706        270 LAEAGRIELPSIPDDCKHNAHMFYIKLRDLE-----------DRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGE  338 (375)
T ss_pred             CCcCCeeecCCCCCCCceeeEEEEEEECCcC-----------CHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCC
Confidence            5211111      111112234445443211           1456888999999986411                 0 


Q ss_pred             ---------CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          474 ---------DNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       474 ---------~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                               +.|.+-.....|++|++.+++.|++++
T Consensus       339 ~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~i~~~~  374 (375)
T PRK11706        339 DRYTTKESERLLRLPLFYNLTDVEQRTVIDTILEFF  374 (375)
T ss_pred             ChHHHHHHhCcEeccCCCCCCHHHHHHHHHHHHHHh
Confidence                     123332223478999999999988764

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.47  E-value=3.6e-12  Score=132.78  Aligned_cols=242  Identities=15%  Similarity=0.165  Sum_probs=146.3

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      .+...+|+++|+++.+   .+.+++++||+.|+.++++.+.        ..+++||+....|+|........      ..
T Consensus        62 ~p~~~~le~~lA~l~g---~~~al~~~SG~~Ai~~al~all--------~pGd~VIv~~~~y~~t~~~~~~~------~~  124 (427)
T PRK05994         62 NPTNAVLEERVAALEG---GTAALAVASGHAAQFLVFHTLL--------QPGDEFIAARKLYGGSINQFGHA------FK  124 (427)
T ss_pred             CccHHHHHHHHHHHhC---CCcEEEEcCHHHHHHHHHHHHh--------CCCCEEEEecCcchhHHHHHHHH------HH
Confidence            3456789999999873   3568999999999999998764        33578999999998752110000      00


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++.   .+..++..                  +.+++++.+.    +++++|++|.+++..|.+.+    +++|.++|+
T Consensus       125 ~~G~---~v~~vd~~------------------d~~~l~~ai~----~~tklV~vesp~NptG~v~d----l~~I~~la~  175 (427)
T PRK05994        125 SFGW---QVRWADAD------------------DPASFERAIT----PRTKAIFIESIANPGGTVTD----IAAIAEVAH  175 (427)
T ss_pred             hcCc---EEEEECCC------------------CHHHHHHhcC----cCCeEEEEECCCCCCCeecC----HHHHHHHHH
Confidence            0110   01111110                  1356666664    35788999999999998887    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccceeEEeC-HH----------------------
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAILVS-PE----------------------  357 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v~~~-~~----------------------  357 (514)
                      +||+++|+|++++ .+.     ........+|+++  ++|.++|..-++|+++.. ..                      
T Consensus       176 ~~gi~livD~a~a-~~~-----~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~  249 (427)
T PRK05994        176 RAGLPLIVDNTLA-SPY-----LIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGL  249 (427)
T ss_pred             HcCCEEEEECCcc-ccc-----cCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhh
Confidence            9999999999997 211     2233445678875  569998733466766552 21                      


Q ss_pred             -HHHHhhhc-c---CCCC-cccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCceeE
Q 010250          358 -VSEVIHSQ-S---NTLG-SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIGE  426 (514)
Q Consensus       358 -i~~~l~~~-~---~~~~-~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~~  426 (514)
                       +.+.+... .   .... ....|  ...+|+.++..+..|+.+.  ...++..++...+.+.|+..++     +|....
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~G--~~~~~~~A~l~~~~l~tL~--~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~  325 (427)
T PRK05994        250 VLHETFGNFAFAIAARVLGLRDLG--PAISPFNAFLILTGIETLP--LRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPD  325 (427)
T ss_pred             hHHHHhhhhhhHHHHHHHHHHhcC--CCCCHHHHHHHHcCcccHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCC
Confidence             11110000 0   0000 00111  2356777777776666553  2356666677777777765421     232211


Q ss_pred             -----------EEeeeeeEEEEEcc
Q 010250          427 -----------IRGTGLILGTEFAD  440 (514)
Q Consensus       427 -----------v~g~g~~~~i~~~~  440 (514)
                                 ..|.|.++.|++..
T Consensus       326 ~~~~~~~~~~~~~g~g~~~sf~l~~  350 (427)
T PRK05994        326 DPYHALAQKYSPKGAGAVFTFGLKG  350 (427)
T ss_pred             CccHHHHHHhcCCCceEEEEEEecC
Confidence                       24678899999863

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.47  E-value=3.3e-11  Score=125.76  Aligned_cols=300  Identities=14%  Similarity=0.132  Sum_probs=172.1

Q ss_pred             hHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHH-HhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250          145 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYY-NNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK  223 (514)
Q Consensus       145 ~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~-~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~  223 (514)
                      ...++++++++++   +.+++++++||++|+..|++.+... ....+-..++.||+...+|.+........+..+.    
T Consensus        64 ~~~~fe~~lA~~~---g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv----  136 (438)
T PRK15407         64 FNDAFEKKLAEFL---GVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPV----  136 (438)
T ss_pred             hHHHHHHHHHHHh---CCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEE----
Confidence            3578999999987   3468999999999999999865311 0001112347899999998765432222211111    


Q ss_pred             CCCCCCcccccCC-CCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          224 FDLPAPFVLHTDC-PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       224 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                               .++. +..|.             .+.+++++.+.    +++++|++.+..|.   ..    .+++|+++|+
T Consensus       137 ---------~vdvd~~~~~-------------id~~~le~~i~----~~tkaVi~~~~~G~---p~----dl~~I~~la~  183 (438)
T PRK15407        137 ---------FVDVELPTYN-------------IDASLLEAAVS----PKTKAIMIAHTLGN---PF----DLAAVKAFCD  183 (438)
T ss_pred             ---------EEecCCCcCC-------------cCHHHHHHHcC----cCCeEEEEeCCCCC---hh----hHHHHHHHHH
Confidence                     0111 01111             12466776663    35677888776442   22    3899999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhchh----hhhcCCcccceeEEeCH-HHHHHhhh---ccCC------
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAILVSP-EVSEVIHS---QSNT------  368 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s----K~l~gG~~pig~v~~~~-~i~~~l~~---~~~~------  368 (514)
                      +||++||.|++|+ +|-.-..   ...|-.-|+.+||    |.++.|  .-|+++.++ ++.+.+..   .+..      
T Consensus       184 ~~gi~vIeDaa~a-~G~~~~g---~~~G~~gd~~~fSf~~~k~~~~g--eGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~  257 (438)
T PRK15407        184 KHNLWLIEDNCDA-LGSTYDG---RMTGTFGDIATLSFYPAHHITMG--EGGAVFTNDPLLKKIIESFRDWGRDCWCAPG  257 (438)
T ss_pred             HCCCEEEEECccc-hhhhcCC---eeeeccCceEEEeCCCCCCcccc--CceEEEECCHHHHHHHHHHHHhCcccccccc
Confidence            9999999999997 5422111   1112223677665    667654  237777754 44443322   1100      


Q ss_pred             -----------------C--C-c---ccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC---CC
Q 010250          369 -----------------L--G-S---FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD---SP  422 (514)
Q Consensus       369 -----------------~--~-~---~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~---~~  422 (514)
                                       .  . .   ...|+.+..+.+.++.++.-|+.++  +..++-+++.+++.+.|..+..   .+
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~--~~~~~R~~~a~~y~~~L~~~~~~~~~~  335 (438)
T PRK15407        258 CDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLP--GFIEARKANFAYLKEGLASLEDFLILP  335 (438)
T ss_pred             cccccccccccccccccccccccccccccccccCccHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccCCCccccC
Confidence                             0  0 0   0134455667888888888888774  3566677777777777766521   11


Q ss_pred             ce-eEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------------------C---------
Q 010250          423 II-GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------------------G---------  473 (514)
Q Consensus       423 ~~-~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------------------g---------  473 (514)
                      .. ......-.++.+.+.+... .        ....+.+.|.++||-++..                   +         
T Consensus       336 ~~~~~~~~~~~~~~i~~~~~~~-~--------~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~  406 (438)
T PRK15407        336 EATPNSDPSWFGFPITVKEDAG-F--------TRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIM  406 (438)
T ss_pred             cCCCCCeeEEEEEEEEECCcCC-C--------CHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHH
Confidence            11 0111111233344432110 0        1346788999999865410                   0         


Q ss_pred             -CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          474 -DNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       474 -~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                       ..|-+-.....|++|++.++++|+++++
T Consensus       407 ~~~l~LP~~~~l~~~~v~~i~~~i~~~~~  435 (438)
T PRK15407        407 NDTFWIGVYPGLTEEMLDYVIEKIEEFFG  435 (438)
T ss_pred             hCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence             1122222345789999999999998874

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.47  E-value=4.6e-12  Score=130.69  Aligned_cols=212  Identities=16%  Similarity=0.153  Sum_probs=128.3

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP  218 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~  218 (514)
                      .++...+|+++++++.   +.+.+++++||++|+..++....        ..+++||+.++.|.+.....   ....|..
T Consensus        63 ~~pt~~~Le~~lA~l~---g~~~~l~~~sgt~Ai~~~l~al~--------~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~  131 (394)
T PRK07050         63 ATPTSLALAQRLAEIE---GGRHALLQPSGLAAISLVYFGLV--------KAGDDVLIPDNAYGPNRDHGEWLARDFGIT  131 (394)
T ss_pred             CCHHHHHHHHHHHHHh---CCCeEEEeccHHHHHHHHHHHHh--------CCCCEEEEecCCcccHHHHHHHHHHhcCeE
Confidence            3455678999999986   34689999999999999997663        34578999998887643110   1111110


Q ss_pred             cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ  298 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~  298 (514)
                                  +..++..                  +.+++++++.    +++.+|++|...+..|...+    +++|.
T Consensus       132 ------------v~~vd~~------------------~~~~l~~~i~----~~tklV~le~p~Np~~~~~d----i~~I~  173 (394)
T PRK07050        132 ------------VRFYDPL------------------IGAGIADLIQ----PNTRLIWLEAPGSVTMEVPD----VPAIT  173 (394)
T ss_pred             ------------EEEECCC------------------CHHHHHHhcC----CCCeEEEEECCCCCCccHhh----HHHHH
Confidence                        0001100                  0145666653    35677888877776665544    99999


Q ss_pred             HHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCc-ccceeEEe-CHHHHHHhhhccCCCCcccc
Q 010250          299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAY-MPIGAILV-SPEVSEVIHSQSNTLGSFSH  374 (514)
Q Consensus       299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~-~pig~v~~-~~~i~~~l~~~~~~~~~~~~  374 (514)
                      ++|+++|+++|+|++|+ .|..     +.......|++  +++|.++|+. .+.|++++ ++++.+.+...       ..
T Consensus       174 ~ia~~~gi~livD~a~a-~~~~-----~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~-------~~  240 (394)
T PRK07050        174 AAARARGVVTAIDNTYS-AGLA-----FKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLA-------RM  240 (394)
T ss_pred             HHHHHcCCEEEEECCcc-cccc-----cCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHH-------HH
Confidence            99999999999999986 2211     11112234766  4779998642 46777776 56777766531       11


Q ss_pred             cCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhh
Q 010250          375 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA  417 (514)
Q Consensus       375 ~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~  417 (514)
                      ....+.+|..+..++..|+.+..  ..++..+++..+.+.|++
T Consensus       241 ~~G~~~~~~~a~l~lr~l~tl~~--Rl~~~~~~a~~la~~L~~  281 (394)
T PRK07050        241 RLGIGVSADDCSLVLRGLPSLQV--RLAAHDRSALEVAEWLKA  281 (394)
T ss_pred             hcCCCCCHHHHHHHHcCCCcHHH--HHHHHHHHHHHHHHHHHh
Confidence            11224456665555443433321  234444555556665554

>PLN02880 tyrosine decarboxylase

Probab=99.46  E-value=2.4e-11  Score=128.34  Aligned_cols=330  Identities=11%  Similarity=0.064  Sum_probs=185.7

Q ss_pred             CchHHHHHHHHHHhcCcCCC------CeEEEeCChhHHHHHHHHHHHHHHhh-cCCCC-ccEEEEEecCCcccceeeeec
Q 010250          143 TKPSLDLAKELLEMFTASKM------AKVFFTNSGSEANDTQVKLVWYYNNA-LGRPN-KKKFIARQKSYHGSTLIAASL  214 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~------~~v~~~~sGseA~~~Alk~a~~~~~~-~~~~~-~~~ii~~~~~yHG~t~~~~~~  214 (514)
                      +....++.+.++++++...-      .-.++++||||||..|+.+||.+..+ .+..+ +.-+++.+..-|-+...+...
T Consensus       121 ~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~  200 (490)
T PLN02880        121 TELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQKACQI  200 (490)
T ss_pred             HHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHHHHHHH
Confidence            34455566777777632210      23688999999999999999865322 11111 233555566668776555554


Q ss_pred             CCCccccCCCCCCCCcccccCCCC--cccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCC
Q 010250          215 SGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPP  290 (514)
Q Consensus       215 s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~  290 (514)
                      .|.+.         ..+..++++.  .++             .+.+.|++.|.+.  ....+.+|+..--....|.+-| 
T Consensus       201 lGlg~---------~~v~~Vp~d~~~~~~-------------md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp-  257 (490)
T PLN02880        201 AGIHP---------ENCRLLKTDSSTNYA-------------LAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP-  257 (490)
T ss_pred             cCCCH---------HHEEEeecCCCcCCc-------------CCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc-
Confidence            44321         1122233321  111             2257788877642  2234566666666666788877 


Q ss_pred             hhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC-CCchhch--hhhhcCCcccceeEEeCHH--HHHHhhhc
Q 010250          291 ATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSF--AKALSSAYMPIGAILVSPE--VSEVIHSQ  365 (514)
Q Consensus       291 ~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv-~pDiv~~--sK~l~gG~~pig~v~~~~~--i~~~l~~~  365 (514)
                         |++|.++|++||+++++|-++.|+-..-..+-....|+ .+|-+++  -|.+... ++.|+++.++.  +...+...
T Consensus       258 ---l~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P-~~~g~llvr~~~~l~~~~~~~  333 (490)
T PLN02880        258 ---LLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTN-FDCSLLWVKDRNALIQSLSTN  333 (490)
T ss_pred             ---HHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCC-ccEEEEEEeCHHHHHHHHccC
Confidence               99999999999999999999986532211111123454 4787765  4988776 68888888642  22323211


Q ss_pred             cCCCCc-------cccc--CCC-CCcHHHHHHHHHHHHHHhhccHHHHHH---HHHHHHHhhhhhccCCCceeEEEeeee
Q 010250          366 SNTLGS-------FSHG--FTY-SGHPVSCAVAIEALKIYKERNIVEQVN---KIAPKFQDGVKAFSDSPIIGEIRGTGL  432 (514)
Q Consensus       366 ~~~~~~-------~~~~--~t~-~~~pl~~aaa~aal~~~~~~~~~~~~~---~~~~~l~~~L~~l~~~~~~~~v~g~g~  432 (514)
                      ..+...       ....  .+. .+..........+|+.+-.+++.++++   ++.+++.+.|++..+..++.+  ....
T Consensus       334 ~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~--~~~~  411 (490)
T PLN02880        334 PEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTP--RIFS  411 (490)
T ss_pred             HHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC--CceE
Confidence            100000       0000  000 111122333445566666677777777   888888888876533333222  1233


Q ss_pred             eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe----eC-CEEEEeCCCC-CCHHHHHHHHHHHHHHHHHHH
Q 010250          433 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV----SG-DNIMMSPPFI-MSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       433 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~----~g-~~iRi~p~~~-~t~e~id~~~~~l~~~l~~~~  504 (514)
                      ++.|.+.+.....   .........+.++|.+.|-+...    .| ..+|+++.-. .|++||+.+++.|.+..+++.
T Consensus       412 iv~Fr~~~~~~~~---~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~  486 (490)
T PLN02880        412 LVCFRLVPPKNNE---DNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLL  486 (490)
T ss_pred             EEEEEEeCCCCCh---hhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            5556654321110   00012344566777776654432    23 3599987544 456999999999998877664

>PRK04311 selenocysteine synthase; Provisional

Probab=99.46  E-value=2.3e-10  Score=119.57  Aligned_cols=318  Identities=14%  Similarity=0.142  Sum_probs=176.9

Q ss_pred             CCHHHHHHHHHHHhcCCccc-ccc-ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCc
Q 010250          117 SEPRLVAAATAQLNTLPFYH-SFW-NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK  194 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~-~~~-~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~  194 (514)
                      -++++.+|+.+.+..+.... ... +...+....+++.+++++   +.+.+++++||+.|+..++...         ..+
T Consensus        98 l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~---Gae~a~vv~sgtaAl~l~l~~l---------~~G  165 (464)
T PRK04311         98 LSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT---GAEDALVVNNNAAAVLLALNAL---------AAG  165 (464)
T ss_pred             CCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh---CCCeEEEECCHHHHHHHHHHHh---------CCC
Confidence            46899999999887543110 010 111233467888888887   3457899999999999888543         334


Q ss_pred             cEEEEEecCCc--cccee---eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250          195 KKFIARQKSYH--GSTLI---AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP  269 (514)
Q Consensus       195 ~~ii~~~~~yH--G~t~~---~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~  269 (514)
                      ++||+.++.+.  |.+..   .+...|...            ..++..+        .       .+.+++++.+.    
T Consensus       166 deVIvs~~e~~~~ggs~~i~~~~~~~G~~l------------~~v~~~~--------~-------t~~~dle~aI~----  214 (464)
T PRK04311        166 KEVIVSRGELVEIGGAFRIPDVMRQAGARL------------VEVGTTN--------R-------THLRDYEQAIN----  214 (464)
T ss_pred             CEEEEcchhhhhcCcchhhHHHHHHCCcEE------------EEECCCC--------C-------CCHHHHHHhcC----
Confidence            67777765332  22111   111111110            0011000        0       01467777774    


Q ss_pred             CcEEEEEEccccC--CCC--cccCChhHHHHHHHHHHhcCCEEEEechhcCccccc------ccceecccCCCCchhchh
Q 010250          270 ETIAAFIAEPVIG--AGG--VIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG------TMFGCDKYSIKPDLVSFA  339 (514)
Q Consensus       270 ~~~aavivEpv~~--~~G--~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G------~~~~~~~~gv~pDiv~~s  339 (514)
                      +++++|+++...+  ..|  ..++    +++|.++|++||+++|+|....-++-.+      .....+......|++++|
T Consensus       215 ~~TklV~~vh~sN~~i~G~~~~~d----l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fS  290 (464)
T PRK04311        215 ENTALLLKVHTSNYRIEGFTKEVS----LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFS  290 (464)
T ss_pred             ccCeEEEEEcCCCccccccCCcCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEec
Confidence            3456666665544  234  3344    9999999999999999998421111111      111112222457999988


Q ss_pred             --hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccH------------HHH
Q 010250          340 --KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNI------------VEQ  403 (514)
Q Consensus       340 --K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~------------~~~  403 (514)
                        |.++|.  ..|++++++++++.+....       ..-.+..+-+..++-.++|..+.+  +.+            .++
T Consensus       291 g~K~LgGp--~~G~i~g~~~li~~l~~~~-------~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~  361 (464)
T PRK04311        291 GDKLLGGP--QAGIIVGKKELIARLKKHP-------LKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEE  361 (464)
T ss_pred             CcccccCC--ceEEEEEcHHHHHHHhhch-------hHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHH
Confidence              999885  3788889999988776311       111222223344444445543321  111            256


Q ss_pred             HHHHHHHHHhhhhhccCCCceeEEE------eeeee-------EEEEEccCCCCCCCCCCccchHHHHHHHHHH--CCcE
Q 010250          404 VNKIAPKFQDGVKAFSDSPIIGEIR------GTGLI-------LGTEFADNKSPNEPFPPEWGIGAYFGAQCEK--HGML  468 (514)
Q Consensus       404 ~~~~~~~l~~~L~~l~~~~~~~~v~------g~g~~-------~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~Gv~  468 (514)
                      ..++++.+.+.|+..........+.      |-|.+       +.+.+....          .....+...|++  ..|+
T Consensus       362 ~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~----------~~~~~l~~~lr~~~~~i~  431 (464)
T PRK04311        362 LRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKD----------RSLEALAARLRLLPPPVI  431 (464)
T ss_pred             HHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCC----------CCHHHHHHHHhcCCCCEE
Confidence            6667777777776541111111111      11221       222232211          124567777775  4577


Q ss_pred             EEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          469 VRVSGDNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       469 ~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      .+...+.+.+-+ .++.++|++.++++|.+.+.
T Consensus       432 ~r~~~~~~~ld~-r~~~~~~~~~~~~~~~~~~~  463 (464)
T PRK04311        432 GRIEDGRLLLDL-RTLEEEDEERLAAALLEALN  463 (464)
T ss_pred             EEEECCEEEEEe-CcCCHHHHHHHHHHHHHHhh
Confidence            777777788876 47788999999999988753

>PLN02509 cystathionine beta-lyase

Probab=99.45  E-value=4.3e-12  Score=132.39  Aligned_cols=230  Identities=16%  Similarity=0.172  Sum_probs=141.8

Q ss_pred             chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccccee---eeecCCCccc
Q 010250          144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI---AASLSGLPAL  220 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~---~~~~s~~~~~  220 (514)
                      +...+++++++++.   +.+.+++++||+.|+..++.+.         ..+++||+.++.|++....   .+...|... 
T Consensus       133 pt~~aLE~~lA~le---g~e~ai~~~SG~aAi~~il~ll---------~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v-  199 (464)
T PLN02509        133 PTRDALESLLAKLD---KADRAFCFTSGMAALSAVTHLI---------KNGEEIVAGDDVYGGSDRLLSQVVPRSGVVV-  199 (464)
T ss_pred             HHHHHHHHHHHHHh---CCCEEEEeCcHHHHHHHHHHHh---------CCCCEEEEcCCchhhHHHHHHHHHHHCCeEE-
Confidence            45788999999986   3467888899998876555332         3356899988888764211   011111110 


Q ss_pred             cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250          221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV  300 (514)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l  300 (514)
                                 ..++.                  .+.+++++.+.    +++.+|++|.+.+..|.+.+    +++|.++
T Consensus       200 -----------~~vd~------------------~d~e~l~~ai~----~~TklV~lesPsNPtG~i~D----l~~I~~l  242 (464)
T PLN02509        200 -----------KRVNT------------------TNLDEVAAAIG----PQTKLVWLESPTNPRQQISD----IRKIAEM  242 (464)
T ss_pred             -----------EEeCC------------------CCHHHHHHhCC----cCCeEEEEECCCCCCCCHHH----HHHHHHH
Confidence                       00110                  01355666553    35678899999888888766    9999999


Q ss_pred             HHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcC-CcccceeEEeC-HHHHHHhhhccCCCCcccccC
Q 010250          301 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSS-AYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGF  376 (514)
Q Consensus       301 ~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~g-G~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~  376 (514)
                      |++||+++|+||+|. .+..+..     .+...|+++  ++|.|+| |..-.|+++++ +.+.+.+...       ....
T Consensus       243 Ak~~g~~lIVD~A~a-~~~~~~p-----l~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~-------~~~~  309 (464)
T PLN02509        243 AHAQGALVLVDNSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFL-------QNSE  309 (464)
T ss_pred             HHHcCCEEEEECCcc-ccccCCh-----hhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHH-------HHhc
Confidence            999999999999985 3333322     233468775  5699987 32224555554 4444443211       1111


Q ss_pred             CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEE
Q 010250          377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEF  438 (514)
Q Consensus       377 t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~  438 (514)
                      ....+|..++.++..|+.+..  ..++..++.+.+.+.|++.+     .+|...          ...|.|.++.|++
T Consensus       310 g~~l~p~~A~l~lr~L~tL~~--R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~  384 (464)
T PLN02509        310 GSGLAPFDCWLCLRGIKTMAL--RIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFIT  384 (464)
T ss_pred             CCCcCHHHHHHHHhhhhhHHH--HHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEe
Confidence            122478888888888887743  46667777777777776532     122211          1346688888888

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=99.44  E-value=1.4e-11  Score=116.50  Aligned_cols=285  Identities=15%  Similarity=0.145  Sum_probs=171.8

Q ss_pred             CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccC
Q 010250          163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRY  242 (514)
Q Consensus       163 ~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (514)
                      .-..+..||+.+.|+|+--..        .+.++|+++..+-+|.......      .+-++     .+..++  ..|..
T Consensus        69 ~tf~isgsGh~g~E~al~N~l--------ePgd~vLv~~~G~wg~ra~D~~------~r~ga-----~V~~v~--~~~G~  127 (385)
T KOG2862|consen   69 QTFVISGSGHSGWEAALVNLL--------EPGDNVLVVSTGTWGQRAADCA------RRYGA-----EVDVVE--ADIGQ  127 (385)
T ss_pred             ceEEEecCCcchHHHHHHhhc--------CCCCeEEEEEechHHHHHHHHH------HhhCc-----eeeEEe--cCccc
Confidence            456788899999999986543        2356788877776664322111      01111     111111  11111


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc
Q 010250          243 AHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT  322 (514)
Q Consensus       243 ~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~  322 (514)
                      ..+           ++++...+.+   .++.+|.+-..-+.+|+..+-   ++.+.++|++|+++|++|-|-+ +|  |.
T Consensus       128 ~~~-----------le~i~~~lsq---h~p~~vfv~hgdsSTgV~q~~---~~~~g~lc~k~~~lllVD~VaS-lg--gt  187 (385)
T KOG2862|consen  128 AVP-----------LEEITEKLSQ---HKPKAVFVTHGDSSTGVLQDL---LAISGELCHKHEALLLVDTVAS-LG--GT  187 (385)
T ss_pred             Ccc-----------HHHHHHHHHh---cCCceEEEEecCccccccchH---HHHHHHHhhcCCeEEEEechhh-cC--Cc
Confidence            111           4667666654   455677777777788888773   7778999999999999999987 54  44


Q ss_pred             cceecccCCCCchhc--hhhhhcCCcccceeEEeCHHHHHHhhhccCCCCccccc----CCCC-----------CcHH-H
Q 010250          323 MFGCDKYSIKPDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHG----FTYS-----------GHPV-S  384 (514)
Q Consensus       323 ~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~----~t~~-----------~~pl-~  384 (514)
                      .|.++.+||  |+.-  --|+|++. ..++.++.++..++.++.+.+++-.+...    .+|+           ..|+ .
T Consensus       188 ~F~mDewgV--DvaytgSQKaL~aP-~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~l  264 (385)
T KOG2862|consen  188 EFEMDEWGV--DVAYTGSQKALGAP-AGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQL  264 (385)
T ss_pred             cceehhhcc--cEEEecchhhcCCC-CCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHH
Confidence            788898988  5543  34999985 45667888999999988755432222111    0111           1133 3


Q ss_pred             HHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhccCCCceeE-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHH
Q 010250          385 CAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGA  460 (514)
Q Consensus       385 ~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  460 (514)
                      .-.-.+||+.+.++   +..++.++++++++..|+++.-...+.+ -........+.        .|+..+|   ..++.
T Consensus       265 ly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~GLq~fv~~e~~rlptvttv~--------vp~gvDw---~dVv~  333 (385)
T KOG2862|consen  265 LYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALGLQLFVVDEELRLPTVTTVK--------VPYGVDW---KDVVA  333 (385)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceecChhhccCcceeee--------cCCCCCH---HHHHH
Confidence            34445777777664   4578889999999999988611111111 00011111222        1222233   34667


Q ss_pred             HHHHCCcEEEe------eCCEEEEeCCC-CCCHHHHHHHHHHHHHHHHH
Q 010250          461 QCEKHGMLVRV------SGDNIMMSPPF-IMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       461 ~l~~~Gv~~~~------~g~~iRi~p~~-~~t~e~id~~~~~l~~~l~~  502 (514)
                      ++..++.+...      .|..+||..-- +.+.|.|+..++.|+.++.+
T Consensus       334 ~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~  382 (385)
T KOG2862|consen  334 YAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR  382 (385)
T ss_pred             HHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence            77777544332      24678987443 34778899999988888754

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.44  E-value=1.8e-11  Score=137.21  Aligned_cols=357  Identities=15%  Similarity=0.135  Sum_probs=198.5

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHH-HHHhcC-Ccccc---ccccCCchHHHHHHHHHHhcCcCCCC-eEEEeCChh
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAAT-AQLNTL-PFYHS---FWNRTTKPSLDLAKELLEMFTASKMA-KVFFTNSGS  172 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~-~~l~~~-~~~~~---~~~~~~~~~~ela~~L~~~~~~~~~~-~v~~~~sGs  172 (514)
                      +..|||..+..      .-.|..++++. +.+... ...++   ......+...+..++++++++....+ .|+|+++.|
T Consensus        34 ~~iYLD~Aatt------~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT  107 (805)
T PLN02724         34 GVVYLDHAGAT------LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGAT  107 (805)
T ss_pred             CCEeEeCCCCC------CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChH
Confidence            36899986652      22444555544 444332 11111   11112344566778888888643334 589999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY  252 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (514)
                      +|+..+.....      - .+++.||+ ....|.+......+..    +.+..     +..++.+....  .+... ...
T Consensus       108 ~alnlva~~l~------~-~~gd~Iv~-t~~eH~svl~~~~~a~----~~G~~-----v~~v~~~~~~~--~~~~~-~g~  167 (805)
T PLN02724        108 AALKLVGETFP------W-SSESHFCY-TLENHNSVLGIREYAL----EKGAA-----AIAVDIEEAAN--QPTNS-QGS  167 (805)
T ss_pred             HHHHHHHHHCC------C-CCCCeEEE-eeccccchHHHHHHHH----HcCCe-----EEeccchhccc--ccccc-ccc
Confidence            99998865431      1 22345665 5566655432221110    00110     00111110000  00000 000


Q ss_pred             HHHHHHHHHHHHH----H--hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc--------CCEEEEechhcCcc
Q 010250          253 STRLANNLEDLIL----K--EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY--------DILFIADEVICAFG  318 (514)
Q Consensus       253 ~~~~~~~le~li~----~--~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~--------gillI~DEv~tG~g  318 (514)
                      .....++|++.+.    .  ...+++.+|.+-.+.+..|.+.|    ++.|.++++..        ++++++|-+|+ +|
T Consensus       168 ~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~p----i~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~-~g  242 (805)
T PLN02724        168 VVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFP----LDLVKLIKDNQHSNFSKSGRWMVLLDAAKG-CG  242 (805)
T ss_pred             cccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCC----HHHHHHHHHhcccccccCcceEEEeehhhh-cC
Confidence            0001134444321    1  11234578888889999999998    77665555532        36899999997 54


Q ss_pred             cccccceecccCCCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCc--------------------ccccC
Q 010250          319 RLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGS--------------------FSHGF  376 (514)
Q Consensus       319 r~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~--------------------~~~~~  376 (514)
                      ..    .++...+.+|.+++|  |.++|. ..+|++++++++.+.+.+.-...+.                    +.. +
T Consensus       243 ~~----piDv~~~~~Dfl~~S~HK~~GgP-~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~-G  316 (805)
T PLN02724        243 TS----PPDLSRYPADFVVVSFYKIFGYP-TGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFED-G  316 (805)
T ss_pred             CC----CCChhhcCCCEEEEecceeccCC-CCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcC-C
Confidence            33    334445568999887  877654 4589999999987776532000000                    000 0


Q ss_pred             CCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccC---CCceeEE---------EeeeeeEEEEEccC
Q 010250          377 TYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSD---SPIIGEI---------RGTGLILGTEFADN  441 (514)
Q Consensus       377 t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~---~~~~~~v---------~g~g~~~~i~~~~~  441 (514)
                        +.|..+.++..++++.+.+   +.+.++...+.+++.+.|+++..   .+.+.-.         ..++.++.|.+...
T Consensus       317 --T~n~~~i~~l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~  394 (805)
T PLN02724        317 --TISFLSIAALRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRA  394 (805)
T ss_pred             --CcchhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcC
Confidence              2345666666677877765   45678899999999999988731   1222111         13566777777653


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHCCcEEEee----------------------------------------CCEEEEeCC
Q 010250          442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------------------------------------GDNIMMSPP  481 (514)
Q Consensus       442 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------------------------------g~~iRi~p~  481 (514)
                      .....      . ...+...+.++||.++.+                                        .+.+|+|..
T Consensus       395 ~~~~v------~-~~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g  467 (805)
T PLN02724        395 DGSWV------G-HREVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFG  467 (805)
T ss_pred             CCCEe------C-HHHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcC
Confidence            32110      0 112333334567776521                                        145999999


Q ss_pred             CCCCHHHHHHHHHHHHHHHH
Q 010250          482 FIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       482 ~~~t~e~id~~~~~l~~~l~  501 (514)
                      +..|.+|||++++.|++...
T Consensus       468 ~ynt~eDvd~lv~~l~~~~~  487 (805)
T PLN02724        468 YMSTFEDCQKFIDFIISSFV  487 (805)
T ss_pred             ccCCHHHHHHHHHHHHHHhh
Confidence            99999999999999999763

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.43  E-value=3.9e-12  Score=130.57  Aligned_cols=279  Identities=18%  Similarity=0.212  Sum_probs=159.3

Q ss_pred             chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCccc
Q 010250          144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPAL  220 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~  220 (514)
                      +...+++++++++++   .+.+++++||+.|+..++.++         ..+++||+.+..|++.....   ....|..  
T Consensus        47 p~~~~le~~la~l~g---~~~~l~~~sG~~al~~~l~ll---------~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~--  112 (378)
T TIGR01329        47 PTRTALESLLAKLDK---ADRAFAFSSGMAALDVITRLL---------NNGDEIIAGDDLYGGTDRLLTQVVPRSGVV--  112 (378)
T ss_pred             hHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHh---------CCCCEEEEcCCCchHHHHHHHHHHHHcCcE--
Confidence            346789999999874   367888999999888766532         23467888888776542110   0001111  


Q ss_pred             cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250          221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV  300 (514)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l  300 (514)
                                +..++..                  +.+++++.+.    +++.+|++|.+.+..|.+.+    +++|.++
T Consensus       113 ----------v~~vd~~------------------d~~~le~~i~----~~tklv~le~psnptg~v~d----l~~I~~l  156 (378)
T TIGR01329       113 ----------VVHVDTT------------------DLDKVKAALG----PKTKLVLLESPTNPLQKIVD----IRKISEM  156 (378)
T ss_pred             ----------EEEeCCC------------------CHHHHHHhcC----cCceEEEEECCCCCCCeeec----HHHHHHH
Confidence                      1111110                  1466766664    46789999988888898887    9999999


Q ss_pred             HHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCC-cccceeEEeC-HHHHHHhhhccCCCCcccccC
Q 010250          301 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSA-YMPIGAILVS-PEVSEVIHSQSNTLGSFSHGF  376 (514)
Q Consensus       301 ~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG-~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~  376 (514)
                      |++||+++|+|+++. .+...     ...+...|+++  .+|.++|+ ....|+++++ +++.+.+...       ....
T Consensus       157 a~~~g~~vivD~a~~-~~~~~-----~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~-------~~~~  223 (378)
T TIGR01329       157 AHAQNALVVVDNTMM-SPLLC-----NPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFL-------QNST  223 (378)
T ss_pred             HHHcCCEEEEECCCc-ccccC-----ChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHH-------HHhc
Confidence            999999999999984 22111     11122458775  45999873 2346777774 4555555421       1111


Q ss_pred             CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEccC
Q 010250          377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFADN  441 (514)
Q Consensus       377 t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~~  441 (514)
                      ....+|..+...+..++.+.  ...++..++...+.+.|++..     .+|...          ...|.|.++.|++.+.
T Consensus       224 G~~~~~~~a~l~~~~l~tl~--~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~  301 (378)
T TIGR01329       224 GSGLAPFDCWLLLRGIKTLA--IRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSV  301 (378)
T ss_pred             CCcCCHHHHHHHHccCCCHH--HHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCH
Confidence            23345666655444444332  123444444455555554321     112111          1236778899988321


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHCCcEEEee----------------------------CCEEEEeCCCCCCHHHHHHHH
Q 010250          442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------------------------GDNIMMSPPFIMSPEEVDELI  493 (514)
Q Consensus       442 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------------------g~~iRi~p~~~~t~e~id~~~  493 (514)
                      .           ....|...|...++.++.+                            .+.|||+.    --|+++.++
T Consensus       302 ~-----------~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~sv----GlE~~~dl~  366 (378)
T TIGR01329       302 A-----------LSKRLVEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSV----GIEDVDDLI  366 (378)
T ss_pred             H-----------HHHHHHHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEe----ccCCHHHHH
Confidence            1           1334555554333333211                            13588883    345677777


Q ss_pred             HHHHHHHHH
Q 010250          494 SKYGKALKA  502 (514)
Q Consensus       494 ~~l~~~l~~  502 (514)
                      +-|+++|++
T Consensus       367 ~dl~~al~~  375 (378)
T TIGR01329       367 SDLDIAFVT  375 (378)
T ss_pred             HHHHHHHHh
Confidence            777777764

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.43  E-value=7.5e-12  Score=130.26  Aligned_cols=160  Identities=19%  Similarity=0.193  Sum_probs=104.9

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      .+....|++.|+++.+   .+.+++++||+.|+..++....        ..+++|++.++.|++.........      .
T Consensus        63 ~p~~~~Le~~lA~leg---~~~al~~~sG~~Ai~~al~~ll--------~~GD~Vlv~~~~y~~t~~~~~~~~------~  125 (431)
T PRK08248         63 NPTTDVFEKRIAALEG---GIGALAVSSGQAAITYSILNIA--------SAGDEIVSSSSLYGGTYNLFAHTL------P  125 (431)
T ss_pred             CchHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEccCchhhHHHHHHHHH------H
Confidence            3456789999999873   4678999999999999987653        345688888888866421110000      0


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++.   .+..++..                  +.+++++++.    +++.+|+++...+..|.+.+    +++|.++|+
T Consensus       126 ~~Gv---~v~~vd~~------------------d~e~l~~ai~----~~tklV~l~sp~NPtG~v~d----i~~I~~la~  176 (431)
T PRK08248        126 KLGI---TVKFVDPS------------------DPENFEAAIT----DKTKALFAETIGNPKGDVLD----IEAVAAIAH  176 (431)
T ss_pred             hCCE---EEEEECCC------------------CHHHHHHhcC----CCCeEEEEECCCCCCCcccC----HHHHHHHHH
Confidence            0110   00111110                  1466666664    35678888888788898887    899999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccceeEEe
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAILV  354 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v~~  354 (514)
                      ++|+++|+|+++. .+..     ........|+++  ++|.++|.+..+|++++
T Consensus       177 ~~gi~vIvD~t~a-~~~~-----~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~  224 (431)
T PRK08248        177 EHGIPLIVDNTFA-SPYL-----LRPIEHGADIVVHSATKFIGGHGTSIGGVIV  224 (431)
T ss_pred             HcCCEEEEeCCCC-cccc-----CChhHcCCCEEEEcCccccCCCCCceEEEEE
Confidence            9999999999985 1111     111123467775  56999985467777666

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.43  E-value=1e-11  Score=128.44  Aligned_cols=234  Identities=15%  Similarity=0.200  Sum_probs=145.2

Q ss_pred             chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCccc
Q 010250          144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPAL  220 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~  220 (514)
                      +...+|++.++++.+   -+.++.++||+.|+.+++..+.        ..+++||+....|.+.....   +..-|... 
T Consensus        61 Ptv~~lE~~la~leg---~~~av~~~SG~aAi~~al~all--------~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v-  128 (432)
T PRK06702         61 PTLAAFEQKLAELEG---GVGAVATASGQAAIMLAVLNIC--------SSGDHLLCSSTVYGGTFNLFGVSLRKLGIDV-  128 (432)
T ss_pred             cHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHhc--------CCCCEEEECCCchHHHHHHHHHHHHHCCCEE-
Confidence            456889999999863   3568999999999999997553        34578999999997653221   11111110 


Q ss_pred             cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250          221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV  300 (514)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l  300 (514)
                              .+   ++.-                 .+.++++++|.    +++.+|++|...+..+.+.+    +++|.++
T Consensus       129 --------~~---vd~~-----------------~d~~~l~~~I~----~~Tk~I~~e~pgnP~~~v~D----i~~I~~i  172 (432)
T PRK06702        129 --------TF---FNPN-----------------LTADEIVALAN----DKTKLVYAESLGNPAMNVLN----FKEFSDA  172 (432)
T ss_pred             --------EE---ECCC-----------------CCHHHHHHhCC----cCCeEEEEEcCCCccccccC----HHHHHHH
Confidence                    00   1100                 01466777775    35678888887777777776    9999999


Q ss_pred             HHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccceeEEe-CH----------HHHH-------
Q 010250          301 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILV-SP----------EVSE-------  360 (514)
Q Consensus       301 ~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~-~~----------~i~~-------  360 (514)
                      |++||+++|+|+++.      .+..+..+..-.||+  +++|-++|...-+|+++. +.          ++.+       
T Consensus       173 A~~~gi~livD~T~~------tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~  246 (432)
T PRK06702        173 AKELEVPFIVDNTLA------TPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHG  246 (432)
T ss_pred             HHHcCCEEEEECCCC------chhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccc
Confidence            999999999999863      233344444456776  567988873334444443 21          1110       


Q ss_pred             --------------HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CC
Q 010250          361 --------------VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DS  421 (514)
Q Consensus       361 --------------~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~  421 (514)
                                    ....      .....+....+|+.+..++..|+.+.  -..++..++...+.+.|++.+     .+
T Consensus       247 ~~~~~~~~~~~~~~~~~~------~~~~~~g~~~sp~~a~l~~rgL~Tl~--lR~~r~~~Na~~la~~L~~~p~V~~V~y  318 (432)
T PRK06702        247 VSYVQNFGAAAYIVKARV------QLLRDYGNCMSPFNAYISNIGLETLH--LRMERHSENALAVAKWLADHERIEWVNY  318 (432)
T ss_pred             cchhhccchhhHHHHHHH------HHHHHccCCCCHHHHHHHHhccCcHH--HHHHHHHHHHHHHHHHHHhCCCcceEEC
Confidence                          0000      01112344778888888887777553  234555677777777776542     12


Q ss_pred             CceeE----------E-EeeeeeEEEEEc
Q 010250          422 PIIGE----------I-RGTGLILGTEFA  439 (514)
Q Consensus       422 ~~~~~----------v-~g~g~~~~i~~~  439 (514)
                      |....          . .|.|.++.|++.
T Consensus       319 Pgl~~~p~~~l~~~~~~~g~gg~~sf~l~  347 (432)
T PRK06702        319 PGLDSNENYSLAQKYLKKGASGVLTFGIK  347 (432)
T ss_pred             CCCCCCccHHHHHHhCcCCCceEEEEEec
Confidence            32211          1 467889999986

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.42  E-value=1.7e-11  Score=127.49  Aligned_cols=161  Identities=15%  Similarity=0.131  Sum_probs=102.2

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      ++...+|+++|+++.   +.+.+++++||+.|+..++....        ..+++||+....|.+........      ..
T Consensus        68 ~p~~~~Le~~lA~l~---g~~~av~~sSG~aAi~~al~all--------~~Gd~Vv~~~~~y~~t~~~~~~~------l~  130 (436)
T PRK07812         68 NPTQDVVEQRIAALE---GGVAALLLASGQAAETFAILNLA--------GAGDHIVSSPRLYGGTYNLFHYT------LP  130 (436)
T ss_pred             CchHHHHHHHHHHHh---CCCeEEEEccHHHHHHHHHHHHh--------CCCCEEEEeCCcchHHHHHHHHH------hh
Confidence            355678999999986   34578999999999999986553        33467888777665432110000      00


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++.   .+..++.+                 .+.+++++.+.    +++.+|++|.+.++.|.+.+    +++|.++|+
T Consensus       131 ~~Gi---~v~~vdd~-----------------~d~e~l~~ai~----~~tklV~ie~~sNp~G~v~D----l~~I~~la~  182 (436)
T PRK07812        131 KLGI---EVSFVEDP-----------------DDLDAWRAAVR----PNTKAFFAETISNPQIDVLD----IPGVAEVAH  182 (436)
T ss_pred             cCeE---EEEEECCC-----------------CCHHHHHHhCC----CCCeEEEEECCCCCCCeecC----HHHHHHHHH
Confidence            0110   00001000                 01355665553    45789999999999999988    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccceeEEe
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAILV  354 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v~~  354 (514)
                      +||+++|+|++++ .+...     .......|+++  ++|.++|.+--+|+++.
T Consensus       183 ~~gi~liVD~t~a-~~~~~-----~pl~~GaDivv~S~tK~lgg~G~~i~G~vv  230 (436)
T PRK07812        183 EAGVPLIVDNTIA-TPYLI-----RPLEHGADIVVHSATKYLGGHGTAIAGVIV  230 (436)
T ss_pred             HcCCEEEEECCCc-ccccC-----CchhcCCCEEEEecccccCCCCCeEEEEEE
Confidence            9999999999886 22221     12223467764  66998873234555555

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.42  E-value=2.6e-10  Score=118.82  Aligned_cols=310  Identities=16%  Similarity=0.162  Sum_probs=170.4

Q ss_pred             CCHHHHHHHHHHHhcCCccc-cc-cccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCc
Q 010250          117 SEPRLVAAATAQLNTLPFYH-SF-WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK  194 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~-~~-~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~  194 (514)
                      -++++++|+.+.+..+.... .. .+........+++.++++++   .+.+++++||+.|+..++...         ..+
T Consensus        93 l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~g---ae~alvv~sg~aAi~l~l~~l---------~~G  160 (454)
T TIGR00474        93 LAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTG---AEDALVVNNNAAAVLLALNTL---------AKG  160 (454)
T ss_pred             CCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHh---------CCc
Confidence            47999999999887543110 00 01122445778899999873   345788999999998888542         345


Q ss_pred             cEEEEEecCC---ccccee--eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250          195 KKFIARQKSY---HGSTLI--AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP  269 (514)
Q Consensus       195 ~~ii~~~~~y---HG~t~~--~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~  269 (514)
                      +.||+.++.+   .|....  .+..+|...            ..++..        ..       .+.+++++.+.    
T Consensus       161 deVIvs~~e~v~~ggs~~i~~~~~~~G~~~------------~~v~~~--------~~-------~~l~dle~aI~----  209 (454)
T TIGR00474       161 KEVIVSRGELVEIGGSFRIPDVMEQSGAKL------------VEVGTT--------NR-------THLKDYEDAIT----  209 (454)
T ss_pred             CEEEECCChhhhhcchhhHHHHHHHcCCEE------------EEeCCC--------CC-------CCHHHHHHhcC----
Confidence            6787776653   232111  111112111            001100        00       01466777664    


Q ss_pred             CcEEEEEEccccC--CCC--cccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc---------ceecccCCCCchh
Q 010250          270 ETIAAFIAEPVIG--AGG--VIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM---------FGCDKYSIKPDLV  336 (514)
Q Consensus       270 ~~~aavivEpv~~--~~G--~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~---------~~~~~~gv~pDiv  336 (514)
                      +++++|+++...+  ..|  .+++    +++|.++|++||+++|+|..   +|..+..         ...+......|++
T Consensus       210 ~~T~lv~~~h~sN~~~~G~~~~~d----l~~I~~la~~~g~~vivD~~---sG~l~~~~~~gl~~~p~~~~~~~~GaDiv  282 (454)
T TIGR00474       210 ENTALLLKVHTSNYRIVGFTEEVS----IAELVALGREHGLPVMEDLG---SGSLVDLSRYGLPDEPTVQEVIAAGVDLV  282 (454)
T ss_pred             cCCEEEEEEccCcccccCCCCCCC----HHHHHHHHHHcCCeEEEECC---CcccccchhccCCCCcccccHhHcCCCEE
Confidence            3456666655543  235  3555    99999999999999999963   3333221         1112223457999


Q ss_pred             chh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc-c-H------------
Q 010250          337 SFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER-N-I------------  400 (514)
Q Consensus       337 ~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~-~-~------------  400 (514)
                      ++|  |.|+|.  ..|++++++++++.+....       ..-....+-+..++..+++..+... + +            
T Consensus       283 ~fSg~K~LgGp--~~G~i~g~~~~i~~l~~~~-------l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~  353 (454)
T TIGR00474       283 TFSGDKLLGGP--QAGIIVGKKELIERLKKNP-------LTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQS  353 (454)
T ss_pred             EecCccccCCC--eEEEEEECHHHHHhhhhch-------hHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccC
Confidence            998  999875  3688889999887765321       0011122233334444444433211 0 1            


Q ss_pred             HHHHHHHHHHHHhhhhhccCCCceeEE------Eeeeee-------EEEEEccCCCCCCCCCCccchHHHHHHHHHHCC-
Q 010250          401 VEQVNKIAPKFQDGVKAFSDSPIIGEI------RGTGLI-------LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG-  466 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l~~~~~~~~v------~g~g~~-------~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-  466 (514)
                      .++.++++..+.+.|+..-...+...+      -|-|.+       +.+.+....          .....+.+.|++.. 
T Consensus       354 ~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~~----------~~~~~l~~~lr~~~~  423 (454)
T TIGR00474       354 PEELRARAERLAKRLKAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPDG----------LSAEKLEARLRELPP  423 (454)
T ss_pred             HHHHHHHHHHHHHHHHhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecCC----------CCHHHHHHHHhcCCC
Confidence            235666677777777653111111111      111221       223332211          01455777777544 


Q ss_pred             -cEEEeeCCEEEEeCCCCCCHHHHHHHHHHH
Q 010250          467 -MLVRVSGDNIMMSPPFIMSPEEVDELISKY  496 (514)
Q Consensus       467 -v~~~~~g~~iRi~p~~~~t~e~id~~~~~l  496 (514)
                       |+.+...+.+.+-+ .++.++|++.++++|
T Consensus       424 ~ii~r~~~~~~~ld~-r~~~~~~~~~~~~~~  453 (454)
T TIGR00474       424 PIIGRIEDDRFLLDL-RTLLEDEEELLIEAL  453 (454)
T ss_pred             CEEEEEECCEEEEEe-CcCCHHHHHHHHHHh
Confidence             77776677777776 367888988888765

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=99.41  E-value=8.4e-11  Score=124.55  Aligned_cols=302  Identities=16%  Similarity=0.125  Sum_probs=164.0

Q ss_pred             EEEeCChhHHHHHHHHHHHHHHhhcC-C----------------CCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250          165 VFFTNSGSEANDTQVKLVWYYNNALG-R----------------PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP  227 (514)
Q Consensus       165 v~~~~sGseA~~~Alk~a~~~~~~~~-~----------------~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~  227 (514)
                      -.|++|||+||..|+.+||....... .                ..++.+|+.+..-|-+...+....|..         
T Consensus       162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg---------  232 (522)
T TIGR03799       162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIG---------  232 (522)
T ss_pred             eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCC---------
Confidence            57899999999999999986532110 0                012345666666666654333222221         


Q ss_pred             CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC
Q 010250          228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD  305 (514)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g  305 (514)
                      ...+..+++...++             .+.++|++.+.+..  ...+.+|+......+.|.+.|    +++|.++|++||
T Consensus       233 ~~~v~~vp~d~~g~-------------~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDp----l~eIa~i~~~~g  295 (522)
T TIGR03799       233 RDNLIAIKTDANNR-------------IDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDP----LDEMADIAQELG  295 (522)
T ss_pred             cccEEEEEeCCCCc-------------CCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCC----HHHHHHHHHHcC
Confidence            01122233322211             23578888775421  123444444444557798988    999999999999


Q ss_pred             CEEEEechhcCcccccccceecccCC-CCchhchh--hhhcCCcccceeEEeC-HHHHHHhhhccCCC---Cccc-ccCC
Q 010250          306 ILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSFA--KALSSAYMPIGAILVS-PEVSEVIHSQSNTL---GSFS-HGFT  377 (514)
Q Consensus       306 illI~DEv~tG~gr~G~~~~~~~~gv-~pDiv~~s--K~l~gG~~pig~v~~~-~~i~~~l~~~~~~~---~~~~-~~~t  377 (514)
                      +++++|-+|.|....-..+.....++ ..|.++++  |.+.+. +++|+++.+ ++..+.+.....+.   +... ...+
T Consensus       296 ~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P-~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~  374 (522)
T TIGR03799       296 CHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVP-MGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHT  374 (522)
T ss_pred             CeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcC-cccEEEEEeCHHHHHHhccCcchhcCCCCCccccce
Confidence            99999999986421111000112355 57888877  888876 688999886 45555554321110   0000 0012


Q ss_pred             CCCc-HHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCC------
Q 010250          378 YSGH-PVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEP------  447 (514)
Q Consensus       378 ~~~~-pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~------  447 (514)
                      +.++ +.......++|+.+..+   .+.++..++.++|.+.|++..+..++..  ..-.++.|.+.+.......      
T Consensus       375 legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~--p~l~iv~Fr~~p~~~~~~l~~~~~~  452 (522)
T TIGR03799       375 LEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTE--PELCLLTYRYVPEEVQQALAKADEE  452 (522)
T ss_pred             eecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecC--CCccEEEEEEeChhhcccccccchh
Confidence            2222 11122355667766553   4577778888888888876533333221  1122444444322110000      


Q ss_pred             -CCC----ccchHHHHHHHHHHCCcEEEee---------C---CEEEEeC-CCCCCHHHHHHHHHH
Q 010250          448 -FPP----EWGIGAYFGAQCEKHGMLVRVS---------G---DNIMMSP-PFIMSPEEVDELISK  495 (514)
Q Consensus       448 -~~~----~~~~~~~~~~~l~~~Gv~~~~~---------g---~~iRi~p-~~~~t~e~id~~~~~  495 (514)
                       ...    ...+...+.+++.+.|......         |   ..+|++. ....|+++|+.+++.
T Consensus       453 ~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~  518 (522)
T TIGR03799       453 QREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPLTTHEILQDILDE  518 (522)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence             000    1123456777778888665421         1   2488864 234688888887653

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.41  E-value=3.7e-12  Score=115.01  Aligned_cols=166  Identities=21%  Similarity=0.313  Sum_probs=110.6

Q ss_pred             HHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCC
Q 010250          147 LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDL  226 (514)
Q Consensus       147 ~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~  226 (514)
                      .++.+++++++. .+.+++++++||++|++.+++.++        ..+++|++.++.|++.........+...       
T Consensus         3 ~~~~~~l~~~~~-~~~~~~~~~~~~t~a~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~~~~~g~~~-------   66 (170)
T cd01494           3 EELEEKLARLLQ-PGNDKAVFVPSGTGANEAALLALL--------GPGDEVIVDANGHGSRYWVAAELAGAKP-------   66 (170)
T ss_pred             HHHHHHHHHHcC-CCCCcEEEeCCcHHHHHHHHHHhC--------CCCCEEEEeecccceehhhHHHhcCCEE-------
Confidence            577888998884 456789999999999999999874        2356899999998887521112222111       


Q ss_pred             CCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCC
Q 010250          227 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDI  306 (514)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gi  306 (514)
                           ..++.+..      .     ....+.+.+++   .....+++++++++.++++|...+    +++|.++|+++|+
T Consensus        67 -----~~v~~~~~------~-----~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~g~~~~----~~~l~~~~~~~~~  123 (170)
T cd01494          67 -----VPVPVDDA------G-----YGGLDVAILEE---LKAKPNVALIVITPNTTSGGVLVP----LKEIRKIAKEYGI  123 (170)
T ss_pred             -----EEeccCCC------C-----ccchhhhhhhh---ccccCceEEEEEecCcCCCCeEcC----HHHHHHHHHHcCC
Confidence                 11111100      0     00000112222   222467899999999999988876    6999999999999


Q ss_pred             EEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEEeC
Q 010250          307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILVS  355 (514)
Q Consensus       307 llI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~~  355 (514)
                      ++|+||++.++......  .......+|+++.|  |.+++  .++|+++++
T Consensus       124 ~li~D~a~~~~~~~~~~--~~~~~~~~d~~~~s~~K~~~~--~~~G~l~~~  170 (170)
T cd01494         124 LLLVDAASAGGASPAPG--VLIPEGGADVVTFSLHKNLGG--EGGGVVIVK  170 (170)
T ss_pred             EEEEecccccccccccc--cccccccCCEEEEEcccccCC--CceEEEEeC
Confidence            99999999976443322  12223458998777  99987  578888764

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.40  E-value=2.4e-11  Score=125.33  Aligned_cols=231  Identities=16%  Similarity=0.141  Sum_probs=134.6

Q ss_pred             chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee---ecCCCccc
Q 010250          144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLPAL  220 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~---~~s~~~~~  220 (514)
                      +...+++++|+++.+   .+..+.++||+.|+..++. .+        ..+++||+.++.|++......   ...|..  
T Consensus        54 p~~~~le~~lA~l~g---~~~~v~~~sG~~ai~~~l~-~l--------~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~--  119 (390)
T PRK08064         54 PTREALEDIIAELEG---GTKGFAFASGMAAISTAFL-LL--------SKGDHVLISEDVYGGTYRMITEVLSRFGIE--  119 (390)
T ss_pred             hhHHHHHHHHHHHhC---CCCeEEECCHHHHHHHHHH-Hh--------CCCCEEEEccCccchHHHHHHHHHHHcCCE--
Confidence            456788999999874   2356777999999988885 32        235689999988876431111   111111  


Q ss_pred             cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250          221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV  300 (514)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l  300 (514)
                                +..++..                  +.+++++.+.    +++.+|++|...+..|.+.+    +++|.++
T Consensus       120 ----------v~~v~~~------------------d~~~l~~~l~----~~tklV~l~~p~NptG~~~d----l~~I~~l  163 (390)
T PRK08064        120 ----------HTFVDMT------------------NLEEVAQNIK----PNTKLFYVETPSNPLLKVTD----IRGVVKL  163 (390)
T ss_pred             ----------EEEECCC------------------CHHHHHHhcC----CCceEEEEECCCCCCcEecc----HHHHHHH
Confidence                      0111110                  1355665553    35678888988888888876    9999999


Q ss_pred             HHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCc-ccceeEEe-CHHHHHHhhhccCCCCcccccC
Q 010250          301 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAY-MPIGAILV-SPEVSEVIHSQSNTLGSFSHGF  376 (514)
Q Consensus       301 ~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~-~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~  376 (514)
                      |+++|+++|+||+|..+ ....     ......|+++  ++|.++|.. .-.|++++ ++++.+.+...       ....
T Consensus       164 a~~~g~~vvvD~a~~~~-~~~~-----~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~-------~~~~  230 (390)
T PRK08064        164 AKAIGCLTFVDNTFLTP-LLQK-----PLDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFL-------QNSF  230 (390)
T ss_pred             HHHcCCEEEEECCCCcc-cccC-----chhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHH-------HHhc
Confidence            99999999999998632 1111     1122357765  569887621 22455555 46787777631       2222


Q ss_pred             CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEc
Q 010250          377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFA  439 (514)
Q Consensus       377 t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~  439 (514)
                      ....+|..+..++..++.+.  ...++..++...+.+.|++..     .+|...          ...|.|.++.|++.
T Consensus       231 g~~~~~~~a~l~~~gl~tl~--~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~  306 (390)
T PRK08064        231 GAVLGVQDCWLVLRGLKTLH--VRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ  306 (390)
T ss_pred             CCCCCHHHHHHHHcccCcHH--HHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC
Confidence            33445555555444444322  123334444444555554321     112111          23467889999985

>PLN02590 probable tyrosine decarboxylase

Probab=99.40  E-value=2.5e-10  Score=120.90  Aligned_cols=327  Identities=12%  Similarity=0.080  Sum_probs=182.4

Q ss_pred             chHHHHHHHHHHhcCcCCC------CeEEEeCChhHHHHHHHHHHHHHHhhc-CCCC-ccEEEEEecCCcccceeeeecC
Q 010250          144 KPSLDLAKELLEMFTASKM------AKVFFTNSGSEANDTQVKLVWYYNNAL-GRPN-KKKFIARQKSYHGSTLIAASLS  215 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~------~~v~~~~sGseA~~~Alk~a~~~~~~~-~~~~-~~~ii~~~~~yHG~t~~~~~~s  215 (514)
                      ....++.++|+++++...-      .--+|+++|||||..|+.+||....+. +..+ .+-+++.+..-|-+...++.+.
T Consensus       170 ~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~il  249 (539)
T PLN02590        170 ELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIG  249 (539)
T ss_pred             HHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHc
Confidence            3444555666666632210      236889999999999999998654321 1111 1235555666676655555444


Q ss_pred             CCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCCh
Q 010250          216 GLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPA  291 (514)
Q Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~  291 (514)
                      |...         ..+..++++  +.++             .+.+.|++.|.+.  ....+.+|+..--....|.+-|  
T Consensus       250 Glg~---------~~vr~Vp~d~~~~~~-------------md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp--  305 (539)
T PLN02590        250 GIHE---------ENIRLLKTDSSTNYG-------------MPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP--  305 (539)
T ss_pred             CCCc---------ccEEEEeCCCCCCCc-------------CCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC--
Confidence            4321         112223322  1112             2257888877642  1223455555555556688877  


Q ss_pred             hHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC-Cchhch--hhhhcCCcccceeEEeCHH--HHHHhhhcc
Q 010250          292 TYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK-PDLVSF--AKALSSAYMPIGAILVSPE--VSEVIHSQS  366 (514)
Q Consensus       292 ~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~-pDiv~~--sK~l~gG~~pig~v~~~~~--i~~~l~~~~  366 (514)
                        |++|.++|++||++|++|-++.|+...-..+..-..|+. .|-+++  -|.+.-. ++.|++++++.  +.+.+....
T Consensus       306 --l~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p-~~cg~llvr~~~~l~~a~~~~~  382 (539)
T PLN02590        306 --LVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFAN-QTCSPLWVKDRYSLIDALKTNP  382 (539)
T ss_pred             --HHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcC-cCEEEEEecCHHHHHHHhhcCH
Confidence              999999999999999999999887432211111123553 676665  4888777 68888888753  333332111


Q ss_pred             CCCCc----------ccc-cCCCCCcHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHhhhhhccCCCceeEEEeeee
Q 010250          367 NTLGS----------FSH-GFTYSGHPVSCAVAIEALKIYKERNI---VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGL  432 (514)
Q Consensus       367 ~~~~~----------~~~-~~t~~~~pl~~aaa~aal~~~~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~  432 (514)
                      .+...          +.+ +... +-.........+|+.+-.+++   +++.-+++++|.+.|++..+..++..  ..-.
T Consensus       383 ~YL~~~~~~~~~~~d~~d~~i~l-sRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~--~~l~  459 (539)
T PLN02590        383 EYLEFKVSKKDTVVNYKDWQISL-SRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTT--RYFS  459 (539)
T ss_pred             HHhCCcccccccCCCccccCCCC-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CceE
Confidence            00000          000 0111 123444555566776655554   55566677888888876533333222  1222


Q ss_pred             eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----CC-EEEEeC-CCCCCHHHHHHHHHHHHHHHHHH
Q 010250          433 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----GD-NIMMSP-PFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       433 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----g~-~iRi~p-~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ++.|.+.......   .........+.+++.+.|.+....    |. .||++. ....+++||+.+++.|.+...++
T Consensus       460 iVcFr~~~~~~~~---~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~  533 (539)
T PLN02590        460 LVCFRLAPVDGDE---DQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKF  533 (539)
T ss_pred             EEEEEecCCCCCH---HHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence            3444443211100   001123566778888888665422    33 489874 24578999999999998886654

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.39  E-value=4.3e-11  Score=123.69  Aligned_cols=304  Identities=16%  Similarity=0.166  Sum_probs=167.7

Q ss_pred             chHHHHHHHHHHhcCcCCCCeEEEeCChh-HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          144 KPSLDLAKELLEMFTASKMAKVFFTNSGS-EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGs-eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      ....++++.+++.++-..++.++++++|| .++..++..++..     .++.+.||+.... |-++..++...|..... 
T Consensus       105 ~l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~-----~~~gd~VI~p~~t-h~S~~kAi~~~G~~pv~-  177 (444)
T TIGR03531       105 KLTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHK-----RPKAKYVIWPRID-QKSCIKAISTAGFEPRV-  177 (444)
T ss_pred             HHHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCc-----CCCCCEEEEECcC-hHHHHHHHHHcCCeEEE-
Confidence            34456777777777433344799999999 6888777665311     1234567777766 66665555555432111 


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                              +.....++.|+             .++++|++.|....++.+.+|+..|..+..|...+    +++|.++|+
T Consensus       178 --------Vd~~~d~~~~~-------------iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~dd----L~eIa~la~  232 (444)
T TIGR03531       178 --------IETVLDGDELT-------------TDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDD----IEEIAKICA  232 (444)
T ss_pred             --------eeeeecCcCCC-------------cCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhC----HHHHHHHHH
Confidence                    00000011111             12688999887544356777777776444444444    999999999


Q ss_pred             hcCCEEEEechhcCccccccccee--cccCC-CCchhch--hhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGC--DKYSI-KPDLVSF--AKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGF  376 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~--~~~gv-~pDiv~~--sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~  376 (514)
                      +||+++|+|++|. ++-. .....  ..... ..|++++  .|.+...+ .-|++++ ++++++.+...       ..+ 
T Consensus       233 k~gI~lIvDaAyg-~~~~-~~~~~~~~g~~~Grad~vv~s~hK~l~~pg-~Gg~I~~~d~el~~~i~~~-------y~g-  301 (444)
T TIGR03531       233 NYDIPHIVNNAYG-LQSN-KYMELINKAIKVGRVDAVVSSTDKNFMVPV-GGAIIYSFDENFIQEISKS-------YPG-  301 (444)
T ss_pred             HcCCEEEEECcCc-CcCh-hhhhhhhccccccCCCeEEEeCccCCCCCC-CEEEEEECCHHHHHHHHHh-------ccC-
Confidence            9999999999996 3111 00000  11112 2477765  48776421 2345556 67888777631       111 


Q ss_pred             CCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhhhhhcc-CCCc-eeEEEeeeeeEEEEEccCCCCCCCCCCcc
Q 010250          377 TYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVKAFS-DSPI-IGEIRGTGLILGTEFADNKSPNEPFPPEW  452 (514)
Q Consensus       377 t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~-~~~~-~~~v~g~g~~~~i~~~~~~~~~~~~~~~~  452 (514)
                      .....| +..+....+..-.+  +++.++..++.+++.+.|+++. ++.. +.+++....-+++.+..-. ..       
T Consensus       302 ~~~~s~-~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~-~~-------  372 (444)
T TIGR03531       302 RASASP-SLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK-GK-------  372 (444)
T ss_pred             CCCChH-HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc-cc-------
Confidence            112222 33333333322111  3567778888889999998872 3321 2222222222333333211 00       


Q ss_pred             chHHHHHHHHHHCCcE----EEee------C---------------CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          453 GIGAYFGAQCEKHGML----VRVS------G---------------DNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       453 ~~~~~~~~~l~~~Gv~----~~~~------g---------------~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                       ....+...|..++|-    +.+.      |               ..+-++....++++|||.++++|++++
T Consensus       373 -~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~  444 (444)
T TIGR03531       373 -DPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL  444 (444)
T ss_pred             -CHHHHHHHHHhCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence             134566777777652    1111      0               123444456789999999999998763

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.39  E-value=4.9e-11  Score=110.64  Aligned_cols=312  Identities=21%  Similarity=0.274  Sum_probs=193.6

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH  221 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~  221 (514)
                      ..++..++-+.|++++   ++|.+.++++.-||-.+++....         ++.+.++.++.-|=.+..+.-..|.... 
T Consensus        59 ~kPpI~~F~~dlaeFl---g~D~~R~t~GARe~KfavMhal~---------~~gd~vV~D~~aHYttyvAAEragl~v~-  125 (382)
T COG1103          59 TKPPIKDFLEDLAEFL---GMDEVRVTAGAREAKFAVMHALC---------KEGDWVVVDSLAHYTTYVAAERAGLNVA-  125 (382)
T ss_pred             cCCcHHHHHHHHHHHh---CCceeeecccchhhHHHHHHHhc---------cCCCEEEEcCcchHHHHHHHHhcCCeEE-
Confidence            3466778888899987   78899999999998887776553         4567889999999887766654443321 


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                              .+++..+|.+      ..+.+.|    .+-+|+...+ +.+.++..++..+-|+.|.+..    -+++.++|
T Consensus       126 --------eVp~tg~Pey------~i~~e~y----~~viee~~~~-~g~~~~lallTh~Dg~YGNl~D----akkva~ic  182 (382)
T COG1103         126 --------EVPNTGYPEY------KITPEGY----AEVIEEVKDE-GGDPPALALLTHVDGEYGNLAD----AKKVAKIC  182 (382)
T ss_pred             --------ecCCCCCCce------EecHHHH----HHHHHHHHhc-cCCCceEEEEeccCCCcCCchh----hHHHHHHH
Confidence                    1223333332      1122333    3445555443 3355778888888899998877    79999999


Q ss_pred             HhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCC-C--Cc-cccc
Q 010250          302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNT-L--GS-FSHG  375 (514)
Q Consensus       302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~-~--~~-~~~~  375 (514)
                      ++||+.++..-+|| .||.    ......+.+|.++-|  |+|+.. .|+|.+..+.++.+..-+.+.. .  .- -..|
T Consensus       183 ~e~gvPlllN~AYt-~Grm----pvs~ke~g~DFiVgSGHKsmAAs-~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellG  256 (382)
T COG1103         183 REYGVPLLLNCAYT-VGRM----PVSGKEIGADFIVGSGHKSMAAS-APIGVLAMSEEWAEIVLRRSGRAFPKKEVELLG  256 (382)
T ss_pred             HHcCCceEeeccee-eccc----cccccccCCCEEEecCccchhcc-CCeeEEeehhHHHHHHHhhcccccccceeeeec
Confidence            99999999999998 7776    445566789988766  888876 6999999999998877554311 1  11 1234


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccc
Q 010250          376 FTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWG  453 (514)
Q Consensus       376 ~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~  453 (514)
                      .|..+-|+....|  .+-...+  .++.+.+ +..++|.+.|.++......+.-+-..-++.|+-+.-   ..-......
T Consensus       257 CT~rGapivTlmA--SfP~V~eRVkrWdeEv-~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f---~eIakk~~r  330 (382)
T COG1103         257 CTVRGAPIVTLMA--SFPHVVERVKRWDEEV-EKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVF---HEIAKKHKR  330 (382)
T ss_pred             ccccCchHHHHHh--cCHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchH---HHHHHhCcC
Confidence            5555555533222  2221111  2333333 345667777766521111110000111122221100   000001111


Q ss_pred             hHHHHHHHHHHCCcEEEeeC--CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          454 IGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       454 ~~~~~~~~l~~~Gv~~~~~g--~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      ..-.+.+.|.++||.-...|  ..+.++. +..+.|+++..++++++.+++
T Consensus       331 ~gyFlY~ELK~RgI~GI~~G~Tk~~K~sv-yGl~~Eqve~V~~afkeI~ek  380 (382)
T COG1103         331 KGYFLYEELKKRGIHGIQPGQTKYFKLSV-YGLSWEQVEYVVDAFKEIAEK  380 (382)
T ss_pred             CceeeHHHHHhcCccccccCceeEEEEEe-ecCCHHHHHHHHHHHHHHHHh
Confidence            23447789999998865555  3578775 678999999999999998865

>PLN02263 serine decarboxylase

Probab=99.38  E-value=5e-10  Score=115.74  Aligned_cols=295  Identities=14%  Similarity=0.081  Sum_probs=174.1

Q ss_pred             CchHHHHHHHHHHhcCcCC-CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250          143 TKPSLDLAKELLEMFTASK-MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH  221 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~-~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~  221 (514)
                      .+...++-+.++++++... --.-+++++|||||..|+.+||.+.       .+.+++++..-|-+..-+..+-|...  
T Consensus       132 ~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~-------~~~vvy~S~~aH~Sv~KAa~llgi~~--  202 (470)
T PLN02263        132 RQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVF-------PDGILYASRESHYSVFKAARMYRMEC--  202 (470)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhc-------CCcEEEEcCCccHHHHHHHHhcCCcc--
Confidence            3444556666677664221 1146889999999999999998652       12367777777776555544444321  


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                                ..++....++             .+.++|++.|.+.. ..+.+|+..-.....|.+-|    +++|.++|
T Consensus       203 ----------~~Vp~d~~g~-------------mD~~aL~~aI~~d~-~~P~iVvataGTT~~GAiDp----i~eIa~i~  254 (470)
T PLN02263        203 ----------VKVDTLVSGE-------------IDCADFKAKLLANK-DKPAIINVNIGTTVKGAVDD----LDLVIKTL  254 (470)
T ss_pred             ----------eEeccCCCCc-------------CcHHHHHHHHHhCC-CCcEEEEEEecCCCCcCCCC----HHHHHHHH
Confidence                      2222222212             23688888876533 23555555555555688877    99999999


Q ss_pred             HhcCC-----EEEEechhcCccccccccee--cccC--CCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCC
Q 010250          302 KKYDI-----LFIADEVICAFGRLGTMFGC--DKYS--IKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLG  370 (514)
Q Consensus       302 ~~~gi-----llI~DEv~tG~gr~G~~~~~--~~~g--v~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~  370 (514)
                      ++||+     +|++|-++.|+--   .|.-  ..+.  ...|-+++.  |.+... ++.|+++.+++.++.+.....+..
T Consensus       255 ~~~g~~~~~iwlHVDAA~GG~~l---Pf~~~~~~~df~~~vDSIsvD~HK~l~~P-~~cgvll~R~~~~~~~~~~~~Yl~  330 (470)
T PLN02263        255 EECGFSQDRFYIHCDGALFGLMM---PFVKRAPKVTFKKPIGSVSVSGHKFVGCP-MPCGVQITRMEHINVLSSNVEYLA  330 (470)
T ss_pred             HHcCCccCCeeEEEeccchhhHh---hhcccccccCCCcCccEEEECCccccCCC-cCEEEEEEehhhHhhhccChHhhC
Confidence            99997     9999999988621   1110  1111  124545544  887777 789999999776655533211111


Q ss_pred             cccccCCCCCc--HHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCC
Q 010250          371 SFSHGFTYSGH--PVSCAVAIEALKIYKERNI---VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPN  445 (514)
Q Consensus       371 ~~~~~~t~~~~--pl~~aaa~aal~~~~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~  445 (514)
                      .  ...|..++  ....+....+|+.+..+++   .++.-++.+++.+.|++.   ++..-.....+.+.+  ..+.   
T Consensus       331 ~--~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~---g~~~~~~p~s~~V~f--~~p~---  400 (470)
T PLN02263        331 S--RDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRNAHYLKDRLREA---GISAMLNELSSTVVF--ERPK---  400 (470)
T ss_pred             C--CCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC---CCeEEeCCCceEEEE--ecCc---
Confidence            1  01122222  2234455666776655554   555666778888888775   222122223333333  2211   


Q ss_pred             CCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          446 EPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       446 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                                    ..+..+|..+...++.+++.....++++.||++++-|++....
T Consensus       401 --------------~~~~~~gW~L~~~~~~~Hivvmphv~~~~id~fi~DL~~~~~~  443 (470)
T PLN02263        401 --------------DEEFVRRWQLACQGNIAHVVVMPSVTIEKLDYFLKELVEKRST  443 (470)
T ss_pred             --------------hHHhhcceEEccCCCcEEEEEcCCCCHHHHHHHHHHHHHHHhh
Confidence                          1123457666665666777766667899999999999887663

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.38  E-value=1.8e-11  Score=125.26  Aligned_cols=237  Identities=11%  Similarity=0.075  Sum_probs=139.9

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      ++....|+++|+++-.   -+..++++||++|+..++....        ..+++||+.++.|.++........      +
T Consensus        63 nPt~~~Le~~la~le~---~~~~v~~sSG~aAi~~~l~all--------~~GD~Vlv~~~~Y~~~~~l~~~~l------~  125 (395)
T PRK05967         63 TPTTDALCKAIDALEG---SAGTILVPSGLAAVTVPFLGFL--------SPGDHALIVDSVYYPTRHFCDTML------K  125 (395)
T ss_pred             ChHHHHHHHHHHHHhC---CCCEEEECcHHHHHHHHHHHhc--------CCCCEEEEccCCcHHHHHHHHHHH------H
Confidence            4556778899988742   2346777779999999986553        345789999999987642110000      0


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++.   .+..++..                  +.+.+++++.    +++.+|++|.+.++.+.+.+    +++|.++|+
T Consensus       126 ~~Gi---~v~~vd~~------------------~~e~l~~al~----~~TklV~lesPsNP~l~v~d----l~~I~~la~  176 (395)
T PRK05967        126 RLGV---EVEYYDPE------------------IGAGIAKLMR----PNTKVVHTEAPGSNTFEMQD----IPAIAEAAH  176 (395)
T ss_pred             hcCe---EEEEeCCC------------------CHHHHHHhcC----cCceEEEEECCCCCCCcHHH----HHHHHHHHH
Confidence            0110   01111100                  0145666664    45788999977777776665    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcC-CcccceeEEeCHHHHHHhhhccCCCCcccccCCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSS-AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS  379 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~g-G~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~  379 (514)
                      ++|+++|+|+++...      ..+.......|+++  ..|.++| |-.-.|+++.++++.+.+...     ....|  ..
T Consensus       177 ~~g~~vvVD~t~a~p------~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~-----~~~~G--~~  243 (395)
T PRK05967        177 RHGAIVMMDNTWATP------LYFRPLDFGVDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEA-----HGTLG--LC  243 (395)
T ss_pred             HhCCEEEEECCccCc------eecChhHcCCCEEEEecccccCCCCCeeEEEEEcCHHHHHHHHHH-----HHHcC--CC
Confidence            999999999998732      12233334467764  6698887 324456666777766655421     00112  23


Q ss_pred             CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250          380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD  440 (514)
Q Consensus       380 ~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~  440 (514)
                      .+|..|...+..|+.+.-  ..++..+++..+.+.|++.+     .+|...          ...|.|.++.|++..
T Consensus       244 ~~p~da~l~~rgl~Tl~l--R~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~  317 (395)
T PRK05967        244 AGPDDTYQILRGLRTMGI--RLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAA  317 (395)
T ss_pred             CCHHHHHHHHcCcccHHH--HHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC
Confidence            567776666655554432  13344444444555554321     122211          134678899999963

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.38  E-value=1.6e-11  Score=125.94  Aligned_cols=168  Identities=15%  Similarity=0.129  Sum_probs=104.7

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      .+...+|+++++++.+   .+.+++++||+.|+.+++.+.         ..+++||+.++.|++.........      .
T Consensus        49 ~p~~~~Le~~la~l~g---~~~al~~~SG~~Al~~~l~~l---------~pGd~Vi~~~~~y~~t~~~~~~~~------~  110 (380)
T PRK06176         49 NPTRFALEELIADLEG---GVKGFAFASGLAGIHAVFSLF---------QSGDHVLLGDDVYGGTFRLFDKVL------V  110 (380)
T ss_pred             ChhHHHHHHHHHHHhC---CCCEEEECCHHHHHHHHHHHc---------CCCCEEEEcCCChhHHHHHHHHHH------H
Confidence            3446789999999863   356788899999998666432         234689898888866531110000      0


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++..   +..++..                  +.+++++.+.    +++.+|++|...+..|.+.+    +++|.++|+
T Consensus       111 ~~gi~---v~~vd~~------------------d~e~l~~ai~----~~t~lV~lesP~Nptg~~~d----i~~I~~la~  161 (380)
T PRK06176        111 KNGLS---CTIIDTS------------------DLSQIKKAIK----PNTKALYLETPSNPLLKITD----LAQCASVAK  161 (380)
T ss_pred             hcCeE---EEEcCCC------------------CHHHHHHhcC----cCceEEEEECCCCCCceecC----HHHHHHHHH
Confidence            01100   0001100                  1456666553    35788888888888888776    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhch--hhhhcCCccc-ceeEEeC-HHHHHHhh
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSAYMP-IGAILVS-PEVSEVIH  363 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG~~p-ig~v~~~-~~i~~~l~  363 (514)
                      +||+++|+|++++.. ..+..     .+...|++++  +|.++|..-. .|+++++ +++.+.+.
T Consensus       162 ~~gi~vivD~t~a~~-~~~~p-----~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~  220 (380)
T PRK06176        162 DHGLLTIVDNTFATP-YYQNP-----LLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIA  220 (380)
T ss_pred             HcCCEEEEECCcccc-ccCCc-----cccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHH
Confidence            999999999998732 22221     2334688765  4999873222 3445664 45655554

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.37  E-value=3.6e-10  Score=115.81  Aligned_cols=348  Identities=16%  Similarity=0.162  Sum_probs=179.7

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ  178 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A  178 (514)
                      ...|||+.|-.++       +...++....+..+.-.   ++ -.+...+|++.+++++   +.+.+++++||+.|+..+
T Consensus        44 ~~v~IDLlSDS~T-------~aMs~~q~a~~~vGDd~---Ya-gd~s~~~LE~~vAe~l---G~e~aV~v~sGTaAl~ll  109 (460)
T PRK13237         44 EDVYIDLLTDSGT-------NAMSDRQWAGMMIGDEA---YA-GSRNFYHLEETVQEYY---GFKHVVPTHQGRGAENLL  109 (460)
T ss_pred             CcEEEECcccCCc-------hhccHHHHHHHhhcchh---hc-CCCcHHHHHHHHHHHH---CCCeEEEeCCHHHHHHHH
Confidence            4578999988765       33344433333222111   11 2234578999999998   567899999999999975


Q ss_pred             HHHHHHHHhhcCCCCccEEEEEecCCcccceee-eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA-ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      ..+.       ..++  ++|  .+.+|-.+..+ +...|.. +.   +...+.......++.+.           ...++
T Consensus       110 ~~l~-------v~pG--d~V--p~n~~f~Tt~ahI~~~Ga~-fv---Di~~d~a~~~~~~~p~t-----------gnlD~  163 (460)
T PRK13237        110 SRIA-------IKPG--QYV--PGNMYFTTTRYHQELNGGI-FV---DIIIDEAHDAQSDHPFK-----------GNVDL  163 (460)
T ss_pred             HHhC-------CCCc--CEE--CCccchHhhHHHHHhCCcE-EE---eeecccccccccCCCCC-----------CCcCH
Confidence            3321       1122  333  44444443222 2222210 00   00000000000011111           12236


Q ss_pred             HHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc-----------cccccce
Q 010250          258 NNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG-----------RLGTMFG  325 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g-----------r~G~~~~  325 (514)
                      +.|+++|...++.+++.+.++- ++..|| .+.+.+.+++|+++|++||+.||.|-++. +|           ..|+...
T Consensus       164 d~Le~~I~~~~~~~~~lV~a~itvn~~GG-qpvs~~~m~~I~elA~~~Gl~Vi~DaAra-~gna~fI~~re~~y~~~~i~  241 (460)
T PRK13237        164 DKLQALIDEVGAENIAYICLAVTVNLAGG-QPVSMANMRAVRELCDKHGIKVFFDATRC-VENAYFIKEREEGYQDKSIK  241 (460)
T ss_pred             HHHHHHhccccCCccCceEEEEecccCCC-eeCCHHhHHHHHHHHHHcCCEEEEECcch-hcChhhhcccccccCCCcHh
Confidence            8889988755444555444443 444445 44555779999999999999999999986 43           1111100


Q ss_pred             --ecccCCCCchhchh--hhhcCCcccc-eeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHH-HHHHHHHHHHHHhhc
Q 010250          326 --CDKYSIKPDLVSFA--KALSSAYMPI-GAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPV-SCAVAIEALKIYKER  398 (514)
Q Consensus       326 --~~~~gv~pDiv~~s--K~l~gG~~pi-g~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl-~~aaa~aal~~~~~~  398 (514)
                        .....--.|+++||  |.++.   ++ |+++. ++++.+.++...   -.+...-||++-.- -+.+....|+...++
T Consensus       242 ei~~e~~s~aD~~t~S~~K~~~~---~~GG~i~t~D~eL~~~~r~~~---~~~eG~~tygg~~grd~~alAvgl~E~~~~  315 (460)
T PRK13237        242 EIVHEMFSYADGCTMSGKKDCLV---NIGGFLAMNDEELFDEAKELV---VVYEGMPSYGGMAGRDMEAMAIGIEESVQY  315 (460)
T ss_pred             HHhhhccCcCcEEEEeCCCCCCC---CCceEEEECCHHHHHHHHHhc---cccCCCcCCCChhhhHHHHHHhHHHhhchH
Confidence              00011125777766  65553   34 45555 567777776421   01122235554211 111111134333334


Q ss_pred             cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEcc--CCCCCCCCCCccchHHHHHHHH-HHCCcEEE-----
Q 010250          399 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFAD--NKSPNEPFPPEWGIGAYFGAQC-EKHGMLVR-----  470 (514)
Q Consensus       399 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~-----  470 (514)
                      +..++.-...++|.+.|++. +.|++....|  .-+.++...  +..+...|+     +..++..| ++-||-..     
T Consensus       316 ~y~~~ri~~~~~l~~~L~~~-Gvpv~~p~gg--H~v~vda~~~lph~~~~~~p-----~~al~~~ly~~~GiR~~e~g~~  387 (460)
T PRK13237        316 EYIEHRVGQVRYLGEKLLAA-GVPIVEPVGG--HAVFLDARRFLPHLPQDQFP-----AQALAAELYIESGVRSMERGIV  387 (460)
T ss_pred             HHHHHHHHHHHHHHHHHHHC-CCceecCCCc--eEEEEEhHHhCCCCCcccCh-----HHHHHHHHHHHhCcCeEeecce
Confidence            56666666778888888764 5566654433  323333221  111111122     33344444 34454332     


Q ss_pred             -----ee-C-------CEEEEeCCC-CCCHHHHHHHHHHHHHHHHH
Q 010250          471 -----VS-G-------DNIMMSPPF-IMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       471 -----~~-g-------~~iRi~p~~-~~t~e~id~~~~~l~~~l~~  502 (514)
                           +. +       +-+|++.|- .-|.+++|...++|.+..++
T Consensus       388 ~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~  433 (460)
T PRK13237        388 SAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH  433 (460)
T ss_pred             ecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence                 11 1       348998884 45999999999988877654

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.37  E-value=2.4e-10  Score=116.75  Aligned_cols=348  Identities=15%  Similarity=0.155  Sum_probs=182.3

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ  178 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A  178 (514)
                      ...|||+.|-.++       +.+.++-...+..+.-.   |. -.+...+|++.+++++   +.+.+++++||+.|...+
T Consensus        37 ~~v~iDLltDsgT-------~aMs~~q~a~~~~GDe~---ya-g~~s~~~lE~~va~~~---G~~~av~v~sGT~Al~ll  102 (450)
T TIGR02618        37 EDVYIDLLTDSGT-------NAMSDKQWAGLMMGDEA---YA-GSRNFYHLERTVRELY---GFKYVVPTHQGRGAENLL  102 (450)
T ss_pred             CceEEEcccCCCc-------HHHHHHHHHHhhhcchh---hc-CCCcHHHHHHHHHHHH---CCCeEEEcCCHHHHHHHH
Confidence            3578999987654       55555522222222111   11 2344678999999998   567899999999997764


Q ss_pred             HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCC--cccccCCCCcccCCCCCCChhHHHHHH
Q 010250          179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAP--FVLHTDCPHYWRYAHPGETEEEYSTRL  256 (514)
Q Consensus       179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (514)
                      . .+.      .+++ + .| ..+.|.-.+...+...|.. ..   +.+..  .-...+  +.|+           ...+
T Consensus       103 ~-~l~------l~pG-D-eV-psn~~f~Tt~ahIe~~Gav-~v---Di~~dea~~~~~~--~p~~-----------GniD  155 (450)
T TIGR02618       103 S-QIA------IKPG-D-YV-PGNMYFTTTRYHQEKNGAT-FV---DIIIDEAHDAQLN--IPFK-----------GNVD  155 (450)
T ss_pred             H-HhC------CCCc-C-EE-CCceeHHHHHHHHHhCCeE-EE---eeecccccccccC--CCCC-----------CCcC
Confidence            3 221      1122 3 33 3333322222212222210 00   00000  000000  1111           1123


Q ss_pred             HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce----ecccCC-
Q 010250          257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG----CDKYSI-  331 (514)
Q Consensus       257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~----~~~~gv-  331 (514)
                      ++.|++.|...+...++.|.++-..+..|-.+.+.+.+++|+++|++||+.||.|-++. +|- + .+-    -...+. 
T Consensus       156 ~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~-~gN-A-~~I~~re~g~~~~~  232 (450)
T TIGR02618       156 LKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRC-VEN-A-YFIKEREQGYEDKS  232 (450)
T ss_pred             HHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccch-hhC-h-hhhhcccccccCCC
Confidence            68888888754333455555555444433355566789999999999999999999886 321 0 000    001111 


Q ss_pred             ----------CCchhchhhhhcCCcccceeEEe--CHHHHHHhhhccCCCCcccccCCCCCcHH-HHHHHHHHHHHHhhc
Q 010250          332 ----------KPDLVSFAKALSSAYMPIGAILV--SPEVSEVIHSQSNTLGSFSHGFTYSGHPV-SCAVAIEALKIYKER  398 (514)
Q Consensus       332 ----------~pDiv~~sK~l~gG~~pig~v~~--~~~i~~~l~~~~~~~~~~~~~~t~~~~pl-~~aaa~aal~~~~~~  398 (514)
                                -.|. +++|+.-.++.|+|.+++  ++++++.++...   ..+..--|+++-.- .+.+...+|+...+.
T Consensus       233 i~ei~~e~~~~aD~-~~~S~~Kd~~~~~GG~l~~~d~~l~~k~r~~~---~~~eG~~tyGgla~r~~~ala~gL~e~~~~  308 (450)
T TIGR02618       233 IAEILKEMMSYADG-CTMSGKKDCLVNIGGFLCMNDDEMFQSAKELV---VVFEGMPSYGGLAGRDMEAMAIGIREAVDY  308 (450)
T ss_pred             HHHHHHHHhccCcE-EEEeeccCCCCCCceEEEeCCHHHHHHHHHHh---hhcCCccccCchhhhhHHHHHHHHHHhhhH
Confidence                      1344 444444333368787776  678888776421   01111124443121 222323345544444


Q ss_pred             cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccC--CCCCCCCCCccchHHHHHHHH-HHCCcEEEe----
Q 010250          399 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADN--KSPNEPFPPEWGIGAYFGAQC-EKHGMLVRV----  471 (514)
Q Consensus       399 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~----  471 (514)
                      ...++.....++|.++|++. ..|++..+  .|..+.++...-  ..+...||     +..++-.| ++-||-..-    
T Consensus       309 ~y~~~r~~~a~~La~~L~~~-Gvpv~~p~--ggh~V~vda~~~lph~~~~~~p-----~~al~~~ly~~~gir~~e~g~~  380 (450)
T TIGR02618       309 EYIEHRVKQVRYLGDKLKAA-GVPIVEPV--GGHAVFLDARRFLPHIPQDQFP-----AQSLAASIYVETGVRSMERGIV  380 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHHC-CCcccCCC--CcceEEEEhHHhCCCCChhhCh-----HHHHHHHHHHHhCccEEeecce
Confidence            55666666788899999887 55664433  345555554331  11111122     33344444 344543321    


Q ss_pred             ------e--------CCEEEEeCCC-CCCHHHHHHHHHHHHHHHHH
Q 010250          472 ------S--------GDNIMMSPPF-IMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       472 ------~--------g~~iRi~p~~-~~t~e~id~~~~~l~~~l~~  502 (514)
                            .        -+-+|++.|- .-|.+++|...+++....++
T Consensus       381 ~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~  426 (450)
T TIGR02618       381 SAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH  426 (450)
T ss_pred             ecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence                  0        0348998884 45999999999988877654

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.37  E-value=4e-10  Score=124.62  Aligned_cols=314  Identities=15%  Similarity=0.143  Sum_probs=190.9

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeE-EEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250          143 TKPSLDLAKELLEMFTASKMAKV-FFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH  221 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v-~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~  221 (514)
                      .....++.+.|++++   +++.+ ++.++|+.|..+++.++|.|+..++..+| .++....+-||+...+....|...  
T Consensus       529 lq~i~elq~~l~elt---Gmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R-~~vlip~saHgtnPasa~~~G~~V--  602 (939)
T TIGR00461       529 QELIAQLEKWLCSIT---GFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHR-NICLIPVSAHGTNPASAAMAGMQV--  602 (939)
T ss_pred             HHHHHHHHHHHHHHH---CCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCC-CEEEEEccccCcCHHHHHHCCCEE--
Confidence            355668889999987   45544 45677888888899999998877776555 456667788887644433333211  


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                                ..+++..             .+..++++|++++.+.+ +++++|++.-.++ .|.+.++   +++|.++|
T Consensus       603 ----------v~V~~d~-------------~G~iDle~L~~~i~~~~-~~taaV~iT~pst-~G~~e~~---I~eI~~ia  654 (939)
T TIGR00461       603 ----------VPVNCDQ-------------DGNIDLVDLKNKAEQHG-DELAAVMVTYPST-HGVFEPT---IQHACDIV  654 (939)
T ss_pred             ----------EEeccCC-------------CCCcCHHHHHHHHhhcC-CceEEEEEEeCCc-Cceeccc---HHHHHHHH
Confidence                      1122211             11123688888886533 4677777755544 4777665   99999999


Q ss_pred             HhcCCEEEEechhcC-cccccccceecccCCCCchhchh--hhhc----CCcccceeEEeCHHHHHHhhhccC-------
Q 010250          302 KKYDILFIADEVICA-FGRLGTMFGCDKYSIKPDLVSFA--KALS----SAYMPIGAILVSPEVSEVIHSQSN-------  367 (514)
Q Consensus       302 ~~~gillI~DEv~tG-~gr~G~~~~~~~~gv~pDiv~~s--K~l~----gG~~pig~v~~~~~i~~~l~~~~~-------  367 (514)
                      +++|.++++|-++.. .+  +   ....-....|+++++  |.|+    +|+-.+|.+++++++...+..+.-       
T Consensus       655 h~~G~~v~VDgAq~~al~--~---l~~Pg~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~  729 (939)
T TIGR00461       655 HSFGGQVYLDGANMNAQV--G---LTSPGDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGI  729 (939)
T ss_pred             HHcCCEEEEEecChhhCC--C---CCCccccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCC
Confidence            999999999999862 21  1   111122346998774  8766    243568889999876655542110       


Q ss_pred             -CCCcc-cccCCCCCcHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHhhhhhccCCCceeEEEe-eee-e--EEEEE
Q 010250          368 -TLGSF-SHGFTYSGHPVSCAVAIEALKIYKERNI---VEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGL-I--LGTEF  438 (514)
Q Consensus       368 -~~~~~-~~~~t~~~~pl~~aaa~aal~~~~~~~~---~~~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~-~--~~i~~  438 (514)
                       ..... .......++.+.+..+...|..+-.+++   .+..-.+.+++.++|++.  .++..  .+ .+. +  +.+++
T Consensus       730 greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~--~~~l~--~~~~~~~~hEfv~~~  805 (939)
T TIGR00461       730 GGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH--YPILF--VGTLKHVAHECILDL  805 (939)
T ss_pred             CCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc--Ccccc--cCCCCceeEEEEEec
Confidence             00000 0111234455555666666777666554   344556778888888763  12211  11 111 1  22333


Q ss_pred             ccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----GDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       439 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      ...+.      ........+.++|++.|+.....    .+.+.+.|.-..|++|||++++++.+..+++.+
T Consensus       806 ~~~~~------~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~  870 (939)
T TIGR00461       806 RPLKA------KTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINA  870 (939)
T ss_pred             cchhh------hcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence            21100      00012567899999999886432    246778887899999999999999877766554

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.37  E-value=6.6e-11  Score=120.71  Aligned_cols=322  Identities=12%  Similarity=0.036  Sum_probs=174.7

Q ss_pred             CCHHHHHHHHHHHhcCCcccc----ccc---cCCchHHHHHHHHHHhcCcCCCCeEEEeCC-hhHHHHHHHHHHHHHHhh
Q 010250          117 SEPRLVAAATAQLNTLPFYHS----FWN---RTTKPSLDLAKELLEMFTASKMAKVFFTNS-GSEANDTQVKLVWYYNNA  188 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~----~~~---~~~~~~~ela~~L~~~~~~~~~~~v~~~~s-GseA~~~Alk~a~~~~~~  188 (514)
                      -++.|++|+.+.+......++    ...   ...+...+..+++++++.....++|+|+++ ||+|++.++....     
T Consensus        10 ~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~-----   84 (355)
T cd00611          10 LPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLL-----   84 (355)
T ss_pred             CCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcC-----
Confidence            478999999998754211110    100   011445677888999886434567888866 9999999987652     


Q ss_pred             cCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC
Q 010250          189 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG  268 (514)
Q Consensus       189 ~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~  268 (514)
                       .+.++...|.. +.|.-+........|..            +..+++++...  + +..        .+..+..+   .
T Consensus        85 -~~~~~~~~i~~-g~~~~~~~~~a~~~g~~------------~~~~~~~~~g~--~-~~~--------~~~~~~~~---~  136 (355)
T cd00611          85 -GDKGTADYVVT-GAWSAKAAKEAKRYGGV------------VVIVAAKEEGK--Y-TKI--------PDVETWDL---A  136 (355)
T ss_pred             -CCCCeEEEEEC-CHHHHHHHHHHHhcCCC------------cEEEecccccC--C-CCC--------CCHhhcCC---C
Confidence             00112233332 33321110000000100            11111111000  0 000        01111111   1


Q ss_pred             CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCccc
Q 010250          269 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMP  348 (514)
Q Consensus       269 ~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~p  348 (514)
                       +++..|.+-.+.+.+|++.+         ++++.||+++++|-+|+ +|..  ..-.+.+++  ++..--|.+ |. ..
T Consensus       137 -~~~~lV~~~h~~t~tG~~~~---------~i~~~~g~~~~VDa~qs-~g~~--~idv~~~~~--~~ss~~K~l-GP-~G  199 (355)
T cd00611         137 -PDAAYVHYCSNETIHGVEFD---------EVPDTGGVPLVADMSSN-ILSR--PIDVSKFGV--IYAGAQKNL-GP-AG  199 (355)
T ss_pred             -CCCCEEEEeCCcccccEEcc---------eecccCCCeEEEEcccc-ccCC--CCCHHHhCE--EEeeccccc-CC-Cc
Confidence             35566777777677777632         45556999999999998 5432  222233332  221123866 34 45


Q ss_pred             ceeEEeCHHHHHHhhhccCCCCc----ccccCCC-CCcHHHHHHHHHHHHHHhhc-c---HHHHHHHHHHHHHhhhhhcc
Q 010250          349 IGAILVSPEVSEVIHSQSNTLGS----FSHGFTY-SGHPVSCAVAIEALKIYKER-N---IVEQVNKIAPKFQDGVKAFS  419 (514)
Q Consensus       349 ig~v~~~~~i~~~l~~~~~~~~~----~~~~~t~-~~~pl~~aaa~aal~~~~~~-~---~~~~~~~~~~~l~~~L~~l~  419 (514)
                      +|++++++++.+.+.+.......    .....++ ..|-.+..+..++|+.+.++ +   +.++.+++.++++++|+++.
T Consensus       200 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~  279 (355)
T cd00611         200 VTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSN  279 (355)
T ss_pred             eEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCc
Confidence            89999999998776542110000    0111123 23344566666888888765 3   46778888889999888873


Q ss_pred             CC-CceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CCEEEEeCCCCCCHHHHHHHHH
Q 010250          420 DS-PIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDNIMMSPPFIMSPEEVDELIS  494 (514)
Q Consensus       420 ~~-~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~iRi~p~~~~t~e~id~~~~  494 (514)
                      +. ....+.. ..+.++.|.+.+.           .....+...+.++|+...+.   .+.+|+++...+|+||||++++
T Consensus       280 gl~~~~~~~~~rs~~vvsf~~~~~-----------~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~  348 (355)
T cd00611         280 GFYRGPVDKRARSRMNVPFRLGKE-----------ELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALAD  348 (355)
T ss_pred             cccccCCCHHHcCceEEEEEcCCh-----------hhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHH
Confidence            32 1111111 1224466655432           01233445778899984433   2469999999999999999999


Q ss_pred             HHHHH
Q 010250          495 KYGKA  499 (514)
Q Consensus       495 ~l~~~  499 (514)
                      .|++.
T Consensus       349 al~~~  353 (355)
T cd00611         349 FMKEF  353 (355)
T ss_pred             HHHHH
Confidence            98874

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.37  E-value=4.4e-11  Score=124.51  Aligned_cols=159  Identities=17%  Similarity=0.164  Sum_probs=104.3

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee-cCCCcccc
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS-LSGLPALH  221 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~-~s~~~~~~  221 (514)
                      .+...+++++++++.+   -+.+++++||++|+..++...+        ..+++||+....|++....... +.      
T Consensus        63 ~p~~~~le~~lA~l~g---~~~av~~sSGt~Al~~al~~ll--------~~Gd~Vi~~~~~y~~t~~~~~~~l~------  125 (433)
T PRK08134         63 NPTVAVLEERVAALEG---GVGAIATASGQAALHLAIATLM--------GAGSHIVASSALYGGSHNLLHYTLR------  125 (433)
T ss_pred             ChHHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHHh--------CCCCEEEEeCCccHHHHHHHHHHHh------
Confidence            3557889999999874   3458999999999999987653        2346788888888764211100 00      


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                       .++.   .+..++..                  +.+++++++.    +++.+|++|.+.+..|.+.+    +++|.++|
T Consensus       126 -~~Gi---~v~~vd~~------------------d~~~l~~~i~----~~TklV~~e~~~np~g~v~D----i~~I~~la  175 (433)
T PRK08134        126 -RFGI---ETTFVKPG------------------DIDGWRAAIR----PNTRLLFGETLGNPGLEVLD----IPTVAAIA  175 (433)
T ss_pred             -hCCe---EEEEECCC------------------CHHHHHHhcC----CCCeEEEEECCCcccCcccC----HHHHHHHH
Confidence             0110   00111110                  1466777664    45778899988888898888    99999999


Q ss_pred             HhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEEe
Q 010250          302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILV  354 (514)
Q Consensus       302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~  354 (514)
                      ++||+++|+|.+|+ .+..     ........|++++|  |.++|.+--+|++++
T Consensus       176 ~~~gi~livD~t~a-~~~~-----~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~  224 (433)
T PRK08134        176 HEAGVPLLVDSTFT-TPYL-----LRPFEHGADLVYHSATKFLGGHGTAIGGVLV  224 (433)
T ss_pred             HHcCCEEEEECCCc-cccc-----CCchhcCCCEEEeccccccCCCCCceEEEEE
Confidence            99999999999986 2221     11223446888765  888763233555544

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.35  E-value=1.4e-11  Score=122.46  Aligned_cols=229  Identities=18%  Similarity=0.230  Sum_probs=129.8

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL  220 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~  220 (514)
                      +.....++.++++++++   .++++| ++++++|+..++..+.        .++++|++..++| .+...++...|....
T Consensus        57 ~~g~i~~~~~~~A~~~g---a~~~~~~~~Gst~a~~~~l~al~--------~~gd~Vlv~~~~h-~s~~~~~~~~g~~~~  124 (294)
T cd00615          57 PTGPIKEAQELAARAFG---AKHTFFLVNGTSSSNKAVILAVC--------GPGDKILIDRNCH-KSVINGLVLSGAVPV  124 (294)
T ss_pred             CChHHHHHHHHHHHHhC---CCCEEEEcCcHHHHHHHHHHHcC--------CCCCEEEEeCCch-HHHHHHHHHCCCEEE
Confidence            55667788889999884   345665 8888999998887653        3345777766654 433333333332111


Q ss_pred             cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250          221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV  300 (514)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l  300 (514)
                      ...     +     +....|..  .       ...+.+++++.+.+. ++..+++++.|.  ..|.+.+    +++|.++
T Consensus       125 ~v~-----~-----~~~~~~~~--~-------~~i~~~~l~~~l~~~-~~~k~v~l~~p~--~~G~~~d----l~~I~~~  178 (294)
T cd00615         125 YLK-----P-----ERNPYYGI--A-------GGIPPETFKKALIEH-PDAKAAVITNPT--YYGICYN----LRKIVEE  178 (294)
T ss_pred             Eec-----C-----ccCcccCc--C-------CCCCHHHHHHHHHhC-CCceEEEEECCC--CCCEecC----HHHHHHH
Confidence            000     0     00000000  0       011257788877542 233445555563  4687776    9999999


Q ss_pred             HHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCccccee-EEeCHHH--HHHhhhccCCCCccccc
Q 010250          301 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGA-ILVSPEV--SEVIHSQSNTLGSFSHG  375 (514)
Q Consensus       301 ~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~-v~~~~~i--~~~l~~~~~~~~~~~~~  375 (514)
                      |++||+++|+||+|......+..+.........|++  +++|.++|  ++.|+ +..+.+.  .+.+..      .....
T Consensus       179 ~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~div~~S~hK~l~g--~~~~~~l~~~~~~~~~~~~~~------~~~~~  250 (294)
T cd00615         179 AHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGADIVVQSTHKTLPA--LTQGSMIHVKGDLVNPDRVNE------ALNLH  250 (294)
T ss_pred             HHhcCCeEEEECcchhhhccCcccCcchhhcCCcEEEEchhcccch--HhHHHHHHhCCCcCCHHHHHH------HHHHH
Confidence            999999999999987421111111111122245776  46698865  44443 3344332  122221      11122


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhhhh
Q 010250          376 FTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVK  416 (514)
Q Consensus       376 ~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~  416 (514)
                      .|.+.+.+.+++..++++.+.+  +++.+++.++.+.+++.|+
T Consensus       251 ~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~~r~~l~  293 (294)
T cd00615         251 QSTSPSYLILASLDVARAMMALEGKELVEELIELALYARQEIN  293 (294)
T ss_pred             CCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence            3556666777777777776643  3467778888888888775

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.34  E-value=6.7e-10  Score=113.72  Aligned_cols=311  Identities=16%  Similarity=0.214  Sum_probs=183.6

Q ss_pred             HHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEE
Q 010250          119 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI  198 (514)
Q Consensus       119 p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii  198 (514)
                      .+..+++.+.++.....     ...+...++++++++++   +.+.++.++||+.|+..|+++.       +-.++++||
T Consensus         5 ~e~~~~v~~~l~s~~~~-----~~g~~~~~fE~~~a~~~---g~~~~~~~~sgt~Al~~al~~l-------~~~~gdeVi   69 (363)
T PF01041_consen    5 EEEIDAVLEVLRSGWLS-----TYGPYVEEFEKEFAEYF---GVKYAVAVSSGTSALHLALRAL-------GLGPGDEVI   69 (363)
T ss_dssp             HHHHHHHHHHHHHTCCS-----SSSHHHHHHHHHHHHHH---TSSEEEEESSHHHHHHHHHHHT-------TGGTTSEEE
T ss_pred             HHHHHHHHHHHHhCCcc-----CCCHHHHHHHHHHHHHh---CCCeEEEeCChhHHHHHHHHhc-------CCCcCceEe
Confidence            45667777777664222     11356789999999998   4679999999999999999875       213457899


Q ss_pred             EEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEc
Q 010250          199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAE  278 (514)
Q Consensus       199 ~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivE  278 (514)
                      +..-+|..........+..|.+-           .++ |..             ...+++++++++.    +++.+|++-
T Consensus        70 ~p~~t~~~~~~ai~~~G~~pv~~-----------Di~-~~~-------------~~id~~~~~~~i~----~~t~ai~~~  120 (363)
T PF01041_consen   70 VPAYTFPATASAILWAGAEPVFV-----------DID-PET-------------LNIDPEALEKAIT----PKTKAILVV  120 (363)
T ss_dssp             EESSS-THHHHHHHHTT-EEEEE------------BE-TTT-------------SSB-HHHHHHHHH----TTEEEEEEE
T ss_pred             cCCCcchHHHHHHHHhccEEEEE-----------ecc-CCc-------------CCcCHHHHHHHhc----cCccEEEEe
Confidence            98888877654444443333221           011 011             1122588888887    456777776


Q ss_pred             cccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh----hhhcCCcccceeEEe
Q 010250          279 PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAILV  354 (514)
Q Consensus       279 pv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s----K~l~gG~~pig~v~~  354 (514)
                      ...|.   ...    +++|.++|+++|+.||-|-+|+ +|-.   +.-...|-.-|+.+||    |.++.|  --|+++.
T Consensus       121 h~~G~---~~d----~~~i~~~~~~~~i~lIeD~a~a-~g~~---~~g~~~G~~gd~~~fSf~~~K~i~~g--eGG~v~~  187 (363)
T PF01041_consen  121 HLFGN---PAD----MDAIRAIARKHGIPLIEDAAQA-FGAR---YKGRPVGSFGDIAIFSFHPTKIITTG--EGGAVVT  187 (363)
T ss_dssp             -GGGB----------HHHHHHHHHHTT-EEEEE-TTT-TT-E---ETTEETTSSSSEEEEESSTTSSS-SS--S-EEEEE
T ss_pred             cCCCC---ccc----HHHHHHHHHHcCCcEEEccccc-cCce---eCCEeccCCCCceEecCCCCCCCcCC--CCeeEEe
Confidence            66653   333    9999999999999999999998 5321   1112223334777766    888654  2367777


Q ss_pred             C-HHHHHHhhhccCCC------Cccc----ccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCC--
Q 010250          355 S-PEVSEVIHSQSNTL------GSFS----HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--  421 (514)
Q Consensus       355 ~-~~i~~~l~~~~~~~------~~~~----~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~--  421 (514)
                      + +++.+.+..-...-      ..+.    .|..+..+++.++.+++-|+.++  ...++-+++.+++++.|..+...  
T Consensus       188 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~--~~~~~R~~~a~~y~~~L~~~~~~~~  265 (363)
T PF01041_consen  188 NDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLD--EIIARRRENAQRYREALAGIPGIKP  265 (363)
T ss_dssp             STHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHHTTGTTEEE
T ss_pred             cHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHhcCCCccc
Confidence            5 56666654311100      0111    24456677888888888887664  34566667777788888766221  


Q ss_pred             -CceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--------------------------
Q 010250          422 -PIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--------------------------  473 (514)
Q Consensus       422 -~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--------------------------  473 (514)
                       +..... ......+.+.+.+...         ...+.+.+.|.++||-+.+..                          
T Consensus       266 ~~~~~~~~~~~~~~f~i~~~~~~~---------~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~  336 (363)
T PF01041_consen  266 PPIPDGAERSSYYRFPIRLPDEAL---------ADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAER  336 (363)
T ss_dssp             EGCGTTTEEBCESSEEEEETCCGC---------STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHH
T ss_pred             cccccccccccccccccccccccc---------chHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHH
Confidence             111111 1222234444443211         014568899999999887321                          


Q ss_pred             ---CEEEEeCCCCCCHHHHHHHHHHHH
Q 010250          474 ---DNIMMSPPFIMSPEEVDELISKYG  497 (514)
Q Consensus       474 ---~~iRi~p~~~~t~e~id~~~~~l~  497 (514)
                         ..|.+-.....+++|++.++++|+
T Consensus       337 l~~r~l~LP~~~~lt~edv~~I~~~ir  363 (363)
T PF01041_consen  337 LSQRLLSLPIHPRLTEEDVDYIAEAIR  363 (363)
T ss_dssp             HHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred             HHhCeEECcCCCCCCHHHHHHHhhccC
Confidence               234555456788999999998874

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.33  E-value=4.3e-11  Score=122.81  Aligned_cols=234  Identities=17%  Similarity=0.167  Sum_probs=135.9

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      .+...+|+++|+++.+   .+..++++||+.|+..++.++         ..+++||+.++.|.+.........      .
T Consensus        49 ~p~~~~Le~~lA~l~g---~~~~~~~~sG~aai~~~~~~l---------~~Gd~Viv~~~~y~~~~~~~~~~~------~  110 (377)
T PRK07671         49 NPTRAALEELIAVLEG---GHAGFAFGSGMAAITAVMMLF---------SSGDHVILTDDVYGGTYRVMTKVL------N  110 (377)
T ss_pred             ChHHHHHHHHHHHHhC---CCceEEeCCHHHHHHHHHHHh---------CCCCEEEECCCccchHHHHHHHHH------h
Confidence            4556789999999873   356788999998887665432         234689999988865421111000      0


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++.   .+..++.                  .+.+++++++.    +++.+|++|..++..|.+.+    +++|.++|+
T Consensus       111 ~~G~---~v~~v~~------------------~d~~~l~~ai~----~~tklV~le~P~NPtg~~~d----l~~I~~la~  161 (377)
T PRK07671        111 RFGI---EHTFVDT------------------SNLEEVEEAIR----PNTKAIYVETPTNPLLKITD----IKKISTIAK  161 (377)
T ss_pred             cCCe---EEEEECC------------------CCHHHHHHhcC----CCCeEEEEECCCCCCCcccC----HHHHHHHHH
Confidence            0010   0000110                  01466666664    35678888877777787766    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCc-ccceeEEe-CHHHHHHhhhccCCCCcccccCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAY-MPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTY  378 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~-~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~  378 (514)
                      ++|+++|+||++... ..+..     .....|+++  ++|.++|.. .-.|++++ ++++++.+...       ......
T Consensus       162 ~~g~~lvvD~a~~~~-~~~~p-----~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~-------~~~~g~  228 (377)
T PRK07671        162 EKGLLTIVDNTFMTP-YWQSP-----ISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFV-------QNSTGG  228 (377)
T ss_pred             HcCCEEEEECCCCcc-ccCCh-----hhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHH-------HHhhcC
Confidence            999999999998631 22221     223357764  669998631 12344555 56677666531       111122


Q ss_pred             CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEE
Q 010250          379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEF  438 (514)
Q Consensus       379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~  438 (514)
                      ..+|..+..++..++.+..  ..++..++...+.+.|++.+     .+|...          ...|.|.++.|++
T Consensus       229 ~~~~~~a~l~~~~l~tl~~--R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~  301 (377)
T PRK07671        229 ILGPQDSWLLLRGLKTLGI--RMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDV  301 (377)
T ss_pred             CCCHHHHHHHHcCcChHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe
Confidence            3456666655555554432  24455566666666665431     122211          1346788999988

>PRK05939 hypothetical protein; Provisional

Probab=99.33  E-value=1.1e-10  Score=120.51  Aligned_cols=158  Identities=13%  Similarity=0.168  Sum_probs=105.2

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccce--eeeecCCCccc
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL--IAASLSGLPAL  220 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~--~~~~~s~~~~~  220 (514)
                      ++...+|+++|+++.+   .+..+.++||+.|+..++....        ..+++||+.+..|.+...  ..+...|..  
T Consensus        46 ~p~~~~lE~~la~leg---~~~~v~~ssG~~Ai~~~l~all--------~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~--  112 (397)
T PRK05939         46 TPTTAALEAKITKMEG---GVGTVCFATGMAAIAAVFLTLL--------RAGDHLVSSQFLFGNTNSLFGTLRGLGVE--  112 (397)
T ss_pred             CHHHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHHHc--------CCCCEEEECCCccccHHHHHHHHHhcCCE--
Confidence            4556789999999863   3467888899999999987653        334678888777755321  111111110  


Q ss_pred             cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250          221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV  300 (514)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l  300 (514)
                                +..++..                  +.+++++.+.    +++.+|++|.+++..|.+.+    +++|.++
T Consensus       113 ----------v~~v~~~------------------d~e~l~~~l~----~~tklV~vesp~NptG~v~d----l~~I~~l  156 (397)
T PRK05939        113 ----------VTMVDAT------------------DVQNVAAAIR----PNTRMVFVETIANPGTQVAD----LAGIGAL  156 (397)
T ss_pred             ----------EEEECCC------------------CHHHHHHhCC----CCCeEEEEECCCCCCCCHHh----HHHHHHH
Confidence                      1111110                  1466776664    45778999999999998876    9999999


Q ss_pred             HHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccceeEEeC
Q 010250          301 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILVS  355 (514)
Q Consensus       301 ~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~~  355 (514)
                      |+++|+++|+|++|+..      ..++......|++  +++|.++|.+..+|+++..
T Consensus       157 a~~~gi~livD~t~a~~------~~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~  207 (397)
T PRK05939        157 CRERGLLYVVDNTMTSP------WLFRPKDVGASLVINSLSKYIAGHGNALGGAVTD  207 (397)
T ss_pred             HHHcCCEEEEECCcccc------cccCccccCCEEEEecCeecccCCCCeEEEEEec
Confidence            99999999999998521      1122222345766  5779999844778887664

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=99.32  E-value=2.2e-10  Score=113.18  Aligned_cols=316  Identities=14%  Similarity=0.154  Sum_probs=204.0

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL  220 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~  220 (514)
                      ..+...+|.++|++..   ++|.|.+ -++|+..=.+.+.++++|+..+|...|+.+|+ ..+-||....+.++.|-.+ 
T Consensus       107 ~l~li~~Lq~~L~~IT---G~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LI-P~SAHGTNPASAam~G~~V-  181 (496)
T COG1003         107 YLELIYELQEWLKEIT---GMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLI-PDSAHGTNPASAAMAGFKV-  181 (496)
T ss_pred             HHHHHHHHHHHHHHhc---CCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEe-eccccCCChhhHhhcCceE-
Confidence            4456677888888875   7888877 56899999999999999999998776655555 5688998766666655332 


Q ss_pred             cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250          221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV  300 (514)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l  300 (514)
                                 ..++|.+             -+..|++||++.+.    +++|++++- .+++-|+....   +.+|+++
T Consensus       182 -----------V~V~~~~-------------~G~VDlddLk~k~~----~~~AalMiT-nPsT~GvFE~~---I~ei~~i  229 (496)
T COG1003         182 -----------VVVKCDE-------------NGNVDLDDLRAKAE----DNLAALMIT-NPSTLGVFEED---IREICEI  229 (496)
T ss_pred             -----------EEEecCC-------------CCCccHHHHHHHhc----cceeEEEec-cCcccccchhh---HHHHHHH
Confidence                       2233321             12334677777664    577777764 33555777654   8999999


Q ss_pred             HHhcCCEEEEech----hcCcccccccc-eecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhc----cC----
Q 010250          301 VKKYDILFIADEV----ICAFGRLGTMF-GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQ----SN----  367 (514)
Q Consensus       301 ~~~~gillI~DEv----~tG~gr~G~~~-~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~----~~----  367 (514)
                      .+++|.+|..|-+    +-|..|-|.++ -+.|+++.-   ||+-.-|||+-..|-+.+++++...+...    ..    
T Consensus       230 vH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlNLHK---TF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~  306 (496)
T COG1003         230 VHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHLNLHK---TFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYR  306 (496)
T ss_pred             HHHcCCEEEecCcchhhhhccccccccccceEEeeccc---ccccCCCCCCCCCCceehHhhccccCCCCcccCCCcccc
Confidence            9999999999975    44777777643 345555432   66666667655567777888887766431    10    


Q ss_pred             ----CCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH---HHHHHHHHHHHhhhhhccCCCceeEEEeee-eeEEEEEc
Q 010250          368 ----TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV---EQVNKIAPKFQDGVKAFSDSPIIGEIRGTG-LILGTEFA  439 (514)
Q Consensus       368 ----~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~---~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g-~~~~i~~~  439 (514)
                          ..........+.||......+.+-+..+-.+++.   +..--+.+++..+|+..-..+..    +.. ...-+.+.
T Consensus       307 ~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~~~y~----~~~~~~HE~ild  382 (496)
T COG1003         307 LDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYPVPYT----GENRVAHECILD  382 (496)
T ss_pred             ccCCCCccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhcCccccC----CCCcceeEEEee
Confidence                0001122345567766677777777777665543   44555778888888753121211    111 01111222


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHCCcEEE----e--eCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----V--SGDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       440 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~--~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      ...-..    ...-....++++|++.|+..-    |  ..+.+.+-|.-.-+++++|+++++|.+..++..+
T Consensus       383 ~r~l~~----~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~  450 (496)
T COG1003         383 ARPLKK----ETGVRALDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADA  450 (496)
T ss_pred             chHhHh----hcCCcHHHHHHHHHhcCCCCCcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            110000    000125568899999998764    2  3467999999999999999999999988876654

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.30  E-value=6.8e-11  Score=120.98  Aligned_cols=237  Identities=13%  Similarity=0.134  Sum_probs=146.2

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      ++....|+++|+++-   +-+.+++++||+.|+.+++...+        ...++||+.+..|++.......      ..+
T Consensus        61 nPt~~~le~~la~LE---g~~~a~~~~SGmaAi~~~~~~ll--------~~GD~Vv~~~~~Yg~t~~l~~~------~l~  123 (395)
T PRK08114         61 TLTHFSLQEAMCELE---GGAGCALYPCGAAAVANAILAFV--------EQGDHVLMTGTAYEPTQDFCSK------ILS  123 (395)
T ss_pred             ChhHHHHHHHHHHHh---CCCeEEEEhHHHHHHHHHHHHHc--------CCCCEEEEeCCCcHHHHHHHHH------HHH
Confidence            345678999999874   34678999999999999887553        3346788877777665322100      001


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++..   +..++.                  .+.+++++++.    +++++|++|.+.+..|.+.+    +++|.++|+
T Consensus       124 ~~Gi~---v~~vd~------------------~d~~~l~~~l~----~~TrlV~~EtpsNp~~~v~D----I~~Ia~ia~  174 (395)
T PRK08114        124 KLGVT---TTWFDP------------------LIGADIAKLIQ----PNTKVVFLESPGSITMEVHD----VPAIVAAVR  174 (395)
T ss_pred             hcCcE---EEEECC------------------CCHHHHHHhcC----CCceEEEEECCCCCCCEeec----HHHHHHHHH
Confidence            11111   111110                  01356676664    46789999999999999998    999999999


Q ss_pred             hcC--CEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCc-ccceeEEeCHHHHHHhhhccCCCCcccccCC
Q 010250          303 KYD--ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAY-MPIGAILVSPEVSEVIHSQSNTLGSFSHGFT  377 (514)
Q Consensus       303 ~~g--illI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~-~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t  377 (514)
                      ++|  +++|+|.+++ .   |  ..++......|+++.|  |.|+|.. .-.|+++.++++.+.+...     ....|. 
T Consensus       175 ~~g~g~~lvVDnT~a-~---p--~~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~-----~~~~G~-  242 (395)
T PRK08114        175 SVNPDAVIMIDNTWA-A---G--VLFKALDFGIDISIQAGTKYLVGHSDAMIGTAVANARCWEQLREN-----SYLMGQ-  242 (395)
T ss_pred             HhCCCCEEEEECCCc-c---c--cccCHHHcCCcEEEEcCcccccCCCcceeEEEEcCHHHHHHHHHH-----HHhccC-
Confidence            985  9999999986 2   2  1244444557888765  9998842 3456666777766655421     011222 


Q ss_pred             CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250          378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD  440 (514)
Q Consensus       378 ~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~  440 (514)
                       ..+|..|...+..|+.+.-  ..++..+++..+.+.|++.+     .+|...          ...|.|.++.|++..
T Consensus       243 -~~~p~~a~l~~rgl~TL~l--R~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~  317 (395)
T PRK08114        243 -MVDADTAYMTSRGLRTLGV--RLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKK  317 (395)
T ss_pred             -CCCHHHHHHHHcCCCcHHH--HHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecC
Confidence             3457766666555554321  14455555556666665431     122211          134678899999864

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.28  E-value=1.8e-09  Score=108.57  Aligned_cols=314  Identities=16%  Similarity=0.169  Sum_probs=187.7

Q ss_pred             HHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEE
Q 010250          119 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI  198 (514)
Q Consensus       119 p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii  198 (514)
                      .+..+++.+.++.+....      -+...++++.+++++   +...++.++|||.|+..|++.+-      . ..++.||
T Consensus        15 ~~e~~~v~~vl~sg~i~~------G~~v~~FE~~~ae~~---G~k~ava~~sgT~AL~laL~al~------i-g~GDeVI   78 (374)
T COG0399          15 EEELAAVQEVLKSGWLTG------GPFVRRFEQAFAEYL---GVKYAVAVSSGTAALHLALLALA------I-GPGDEVI   78 (374)
T ss_pred             hHHHHHHHHHHHcCCeec------ChHHHHHHHHHHHHh---CCCeEEEecChHHHHHHHHHhcC------C-CCCCEEE
Confidence            456777778777654331      244578999999987   56789999999999999998552      1 3356888


Q ss_pred             EEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEc
Q 010250          199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAE  278 (514)
Q Consensus       199 ~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivE  278 (514)
                      +.+-+|-...-..+..+..|.+-           .++ |+.|             ..+.+.+|+.|.    +++.|||.=
T Consensus        79 ~ps~TfvATan~i~~~Ga~PVFv-----------Did-~~T~-------------nid~~~ie~aIt----~~tKAIipV  129 (374)
T COG0399          79 VPSFTFVATANAVLLVGAKPVFV-----------DID-PDTL-------------NIDPDLIEAAIT----PRTKAIIPV  129 (374)
T ss_pred             ecCCchHHHHHHHHHcCCeEEEE-----------ecC-Cccc-------------CCCHHHHHHHcc----cCCeEEEEe
Confidence            88877765543333333333321           111 1111             123577888876    335666655


Q ss_pred             cccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh----hhhcCCcccceeEEe
Q 010250          279 PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAILV  354 (514)
Q Consensus       279 pv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s----K~l~gG~~pig~v~~  354 (514)
                      ...|   ..+.    ++.|.+||++||+.+|-|-+|+ +|-+   +.-...|-.-|+.+||    |.|+.|  --|+++.
T Consensus       130 hl~G---~~~d----m~~i~~la~~~~l~vIEDaAqa-~Ga~---y~gk~vGt~Gd~~~fSF~~~K~ittg--EGGav~t  196 (374)
T COG0399         130 HLAG---QPCD----MDAIMALAKRHGLPVIEDAAQA-HGAT---YKGKKVGSFGDIGAFSFHATKNLTTG--EGGAVVT  196 (374)
T ss_pred             hhcc---CCCC----HHHHHHHHHHcCCeEEEEcchh-ccCe---ecCcccccccceEEEEecCCCCcccc--CceEEEe
Confidence            5554   3343    9999999999999999999997 5432   1112223334677766    888764  2367777


Q ss_pred             C-HHHHHHhhh---ccC------CCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCce
Q 010250          355 S-PEVSEVIHS---QSN------TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPII  424 (514)
Q Consensus       355 ~-~~i~~~l~~---~~~------~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~  424 (514)
                      + +++.+.++.   ++.      ++.....|+.+-.+-+.++.+++-|+.++  ++.++-++..++..+.|+++......
T Consensus       197 nd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~--~~~~~R~~~a~~Y~~~l~~~~~~~~p  274 (374)
T COG0399         197 NDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLD--EINERRREIAQIYAEALKGLPGITLP  274 (374)
T ss_pred             CCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhhcCCCcccc
Confidence            5 566665543   211      11112234455556677777777777654  45666677777778888766322111


Q ss_pred             eEEEee-e--eeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEE----Eee--------------C----------
Q 010250          425 GEIRGT-G--LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV----RVS--------------G----------  473 (514)
Q Consensus       425 ~~v~g~-g--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~----~~~--------------g----------  473 (514)
                      ....+. .  .++.+.+.....          ..+.+...|.++||..    .|.              +          
T Consensus       275 ~~~~~~~~~~~~~~i~~~~~~~----------~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~  344 (374)
T COG0399         275 PEPDGAVHAWHLYTILVDEEGI----------SRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSE  344 (374)
T ss_pred             CCCCCceeeeeeeEEEecCCCC----------CHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhh
Confidence            111111 1  122233332200          1345778888886553    220              1          


Q ss_pred             CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          474 DNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       474 ~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      ..+.+-....++++|+++++++|++++.+
T Consensus       345 r~l~LP~~p~l~~~~~~~V~~~l~~~~~~  373 (374)
T COG0399         345 RILSLPLHPNLSEEDVDRVIEALKEVLGS  373 (374)
T ss_pred             CeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence            23455444578999999999999998753

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.27  E-value=1.2e-10  Score=118.98  Aligned_cols=235  Identities=17%  Similarity=0.223  Sum_probs=139.7

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      ++....+++.|+++-+   -+.++.++||..|+.+++....        ...++||.....|+|........      ..
T Consensus        54 nPt~~~le~~la~Le~---g~~a~~~~SGmaAi~~~l~~ll--------~~Gd~iv~~~~~Y~~t~~~~~~~------l~  116 (386)
T PF01053_consen   54 NPTVRALEQRLAALEG---GEDALLFSSGMAAISAALLALL--------KPGDHIVASDDLYGGTYRLLEEL------LP  116 (386)
T ss_dssp             -HHHHHHHHHHHHHHT----SEEEEESSHHHHHHHHHHHHS---------TTBEEEEESSSSHHHHHHHHHC------HH
T ss_pred             cccHHHHHHHHHHhhc---ccceeeccchHHHHHHHHHhhc--------ccCCceEecCCccCcchhhhhhh------hc
Confidence            4556789999998863   3679999999999998887653        23568999999998853111100      00


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .+++.   +..++.                  .+.+++++++.    +++.+|++|++.+....+++    |++|+++|+
T Consensus       117 ~~gv~---v~~~d~------------------~d~~~l~~~l~----~~t~~v~~EspsNP~l~v~D----l~~i~~~a~  167 (386)
T PF01053_consen  117 RFGVE---VTFVDP------------------TDLEALEAALR----PNTKLVFLESPSNPTLEVPD----LEAIAKLAK  167 (386)
T ss_dssp             HTTSE---EEEEST------------------TSHHHHHHHHC----TTEEEEEEESSBTTTTB-------HHHHHHHHH
T ss_pred             ccCcE---EEEeCc------------------hhHHHHHhhcc----ccceEEEEEcCCCccccccc----HHHHHHHHH
Confidence            11111   111111                  01477777775    48999999999888876766    999999999


Q ss_pred             hcC-CEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCc-ccceeEEeC--HHHHHHhhhccCCCCcccccC
Q 010250          303 KYD-ILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAY-MPIGAILVS--PEVSEVIHSQSNTLGSFSHGF  376 (514)
Q Consensus       303 ~~g-illI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~-~pig~v~~~--~~i~~~l~~~~~~~~~~~~~~  376 (514)
                      ++| +++|+|......      ..++.+....|+++  ..|-++|.. .-.|+++++  +++.+.+....     ...|.
T Consensus       168 ~~g~~~~vVDnT~atp------~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~-----~~~G~  236 (386)
T PF01053_consen  168 EHGDILVVVDNTFATP------YNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFR-----RLLGA  236 (386)
T ss_dssp             HTTT-EEEEECTTTHT------TTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHH-----HHHT-
T ss_pred             HhCCceEEeeccccce------eeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchh-----hhcCc
Confidence            998 999999987521      23333434468875  569888622 335666655  46777665311     12222


Q ss_pred             CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEE------------------EeeeeeEEEEE
Q 010250          377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI------------------RGTGLILGTEF  438 (514)
Q Consensus       377 t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v------------------~g~g~~~~i~~  438 (514)
                        ..+|..+...+..|+.+..  ..++..+++..+.+.|++.   |.+..|                  .|.|.++.|++
T Consensus       237 --~~~p~da~ll~rgl~Tl~~--R~~~~~~nA~~lA~~L~~h---p~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l  309 (386)
T PF01053_consen  237 --TLSPFDAWLLLRGLRTLPL--RMERQNENAEALAEFLEEH---PKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFEL  309 (386)
T ss_dssp             --B--HHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTS---TTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEE
T ss_pred             --cchHHHHHHHhcCCCcHHH--HHHHHHHHHHHHHHHHHhC---CCCCeEEEcccccccceeeeeecccccCceeEEEe
Confidence              2345655555555543321  2455556666666666543   333332                  35566899998


Q ss_pred             ccC
Q 010250          439 ADN  441 (514)
Q Consensus       439 ~~~  441 (514)
                      .+.
T Consensus       310 ~~~  312 (386)
T PF01053_consen  310 KGG  312 (386)
T ss_dssp             SSH
T ss_pred             ccc
Confidence            754

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.27  E-value=2.5e-10  Score=118.83  Aligned_cols=161  Identities=14%  Similarity=0.197  Sum_probs=99.7

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      .+...+++++++++.+   .+..++++||++|+.+++....        ..+++||+....|++........-      .
T Consensus        68 ~pt~~~le~~la~l~g---~~~~v~fsSG~~Ai~~al~~ll--------~~Gd~VI~~~~~y~~t~~~~~~~l------~  130 (437)
T PRK05613         68 NPTVEALENRIASLEG---GVHAVAFASGQAAETAAILNLA--------GAGDHIVTSPRLYGGTETLFLVTL------N  130 (437)
T ss_pred             ChHHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHHhc--------CCCCEEEECCCccHHHHHHHHHHH------H
Confidence            3556788999999863   3578899999999998886543        334678887777766421100000      0


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++..   +..++.+.                 +.+++++.+.    +++.+|++|...+..|.+.+    +++|.++|+
T Consensus       131 ~~Gi~---v~~vd~~~-----------------d~e~l~~~l~----~~tk~V~~e~~~Np~~~v~d----i~~I~~la~  182 (437)
T PRK05613        131 RLGIE---VTFVENPD-----------------DPESWQAAVQ----PNTKAFFGETFANPQADVLD----IPAVAEVAH  182 (437)
T ss_pred             hcCeE---EEEECCCC-----------------CHHHHHHhCC----ccCeEEEEECCCCCCCcccC----HHHHHHHHH
Confidence            01100   01111000                 1356666664    34667888887777777777    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEEe
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILV  354 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~  354 (514)
                      ++|+++|+|.+++ .|..     +.......|++++|  |.++|-+-.+|++++
T Consensus       183 ~~gi~livD~t~a-~g~~-----~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv  230 (437)
T PRK05613        183 RNQVPLIVDNTIA-TAAL-----VRPLELGADVVVASLTKFYTGNGSGLGGVLI  230 (437)
T ss_pred             HcCCeEEEECCCc-cccc-----cChHHhCCCEEEeeccceecCCCcceeEEEE
Confidence            9999999999986 3221     11112235888765  988872234455444

>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]

Probab=99.27  E-value=6.5e-10  Score=102.70  Aligned_cols=275  Identities=15%  Similarity=0.225  Sum_probs=162.4

Q ss_pred             CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcc
Q 010250          161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      ..+.+....+..|.+++.+++.+       .|++.||+.+.+.|.-++..+..- +            ..+..++..+.|
T Consensus        85 t~dnic~GvGsDE~ID~iiR~~c-------~PGkeKIl~cPPtysMY~v~A~iN-d------------~eVvkvpl~pdF  144 (375)
T KOG0633|consen   85 TSDNICVGVGSDELIDLIIRCVC-------DPGKEKILDCPPTYSMYVVDAAIN-D------------AEVVKVPLNPDF  144 (375)
T ss_pred             CccceEEecCcHHHHHHHHhhee-------cCCccceeecCCcceeEEEEeecC-C------------ceEEEecCCCCc
Confidence            45788999999999999999874       378999999999997665444321 1            112222221111


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL  320 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~  320 (514)
                      .            -+ .+.+...+...  ..+.++++....+.+|.+.. .+-+.+|.+.-+  +.++++||+|-.|.-.
T Consensus       145 ~------------ln-vdai~evl~~d--s~iK~~F~tSPgNPtg~~ik-~~di~KiLe~p~--nglVVvDEAYidFsg~  206 (375)
T KOG0633|consen  145 S------------LN-VDAIAEVLELD--SKIKCIFLTSPGNPTGSIIK-EDDILKILEMPD--NGLVVVDEAYIDFSGV  206 (375)
T ss_pred             c------------cc-HHHHHHHHhcc--ccceEEEEcCCCCCCccccc-HHHHHHHHhCCC--CcEEEEeeeeEeeccc
Confidence            1            11 24444444322  23445444444444455544 233444444333  7899999999877322


Q ss_pred             cccceecccCCCCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH--H
Q 010250          321 GTMFGCDKYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI--Y  395 (514)
Q Consensus       321 G~~~~~~~~gv~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~--~  395 (514)
                      +.  ...+..--|.++   ||||.+|-.++++|+.+.+.++.+.+....         ..|.-+..+..+|++|+.-  +
T Consensus       207 ~S--~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~K---------aPYNiS~~~s~~AL~Als~~n~  275 (375)
T KOG0633|consen  207 ES--RMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAK---------APYNISVAGSVAALAALSDSNG  275 (375)
T ss_pred             cc--cchHhHhCCceeehhhhhhhcCcceeEeecccccHHHHHHHHhcc---------CCccccchhHHHHHHhcCcccc
Confidence            21  222222236655   689977764599999999999988887421         3555566667777777652  1


Q ss_pred             h-hccHHHHHHHHHHHHHhhhhhccCCCceeEEEe--eeeeEEEEEccCCCCCCCCCCccchHHH-HHHHHHHCCcEEEe
Q 010250          396 K-ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG--TGLILGTEFADNKSPNEPFPPEWGIGAY-FGAQCEKHGMLVRV  471 (514)
Q Consensus       396 ~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g--~g~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~Gv~~~~  471 (514)
                      + -+...+.+.+.+.+|-..|.++   +.+.+..|  ...++-++..+...         +.+.. +.+.+.+.|+.++.
T Consensus       276 kkme~~rdaiv~er~RL~keLt~v---~~~~~~~gg~daNFiLi~v~~~~n---------~~akkly~q~at~~gVvVRf  343 (375)
T KOG0633|consen  276 KKMEDVRDAIVRERERLFKELTEV---PFLNDYPGGSDANFILIEVTGGDN---------GMAKKLYKQDATKMGVVVRF  343 (375)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcC---ccccCCCCcccccEEEEEEcCCCc---------HHHHHHHHHHHHhcceEEEE
Confidence            1 1234455555566666667665   33322111  23344555543221         12333 33455578999996


Q ss_pred             eC------CEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250          472 SG------DNIMMSPPFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       472 ~g------~~iRi~p~~~~t~e~id~~~~~l~~~  499 (514)
                      .|      +.+|++   ..|+|+-+.+++.|+++
T Consensus       344 rgse~~c~G~lRit---vGt~EentvL~k~~K~~  374 (375)
T KOG0633|consen  344 RGSEEGCKGYLRIT---VGTPEENTVLMKCLKQF  374 (375)
T ss_pred             cCCccccceeEEEE---cCCcccchHHHHHHHhh
Confidence            54      469999   78899999999888765

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=99.26  E-value=3.9e-09  Score=107.05  Aligned_cols=354  Identities=15%  Similarity=0.159  Sum_probs=188.3

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV  179 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al  179 (514)
                      ..|||+.|-.++   +--.++.++||..    +.-.   |+ -.+...+|++..++++   +.+.++++.+|..|...+.
T Consensus        41 dV~IDLrSDTgT---~apS~~m~aAM~~----GDD~---Y~-gdpSv~~Lee~vael~---G~E~alpthqGRgaE~Il~  106 (467)
T TIGR02617        41 DVFIDLLTDSGT---GAVTQSMQAAMMR----GDEA---YS-GSRSYYALAESVKNIF---GYQYTIPTHQGRGAEQIYI  106 (467)
T ss_pred             CeEEECccCCCC---CCCCHHHHHHHHc----CCcc---cc-cCchHHHHHHHHHHHh---CCceEEECCCCchHHHHHH
Confidence            347999988554   2135677777765    2111   11 2334568999999998   6778999999999888888


Q ss_pred             HHHHHHHhhcCCCCccEEE------EEecCCcccc-eeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250          180 KLVWYYNNALGRPNKKKFI------ARQKSYHGST-LIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY  252 (514)
Q Consensus       180 k~a~~~~~~~~~~~~~~ii------~~~~~yHG~t-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (514)
                      ++...       +.++.++      ++...||-.+ -+...++|.....    .+.+.....+.+..|+.          
T Consensus       107 ~~~~~-------~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~----l~~~ea~~~~~~~~fkG----------  165 (467)
T TIGR02617       107 PVLIK-------KREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARN----VYTKEAFDTGVRYDFKG----------  165 (467)
T ss_pred             Hhhcc-------cccccccccccccccceEEEEecchHHHHHcCceeec----ccchhhcccccCCCCCC----------
Confidence            76531       1111222      2223444443 2233333321110    00000000111111221          


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc----Cc------ccccc
Q 010250          253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC----AF------GRLGT  322 (514)
Q Consensus       253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t----G~------gr~G~  322 (514)
                       ..++++|+++|...+++++..+.+.-.+|..|-.+.|.+.+++++++|++||+.++.|-+--    -|      +..|.
T Consensus       166 -~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~  244 (467)
T TIGR02617       166 -NFDLEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNW  244 (467)
T ss_pred             -CcCHHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCC
Confidence             12368899999876666777777777777666677788999999999999999999996531    01      12221


Q ss_pred             cc---eecccCCCCchh--chhhhhcCCcccceeEEe-CHH-HHHHhhhccCCCCcccccCCCCCcHHHHHHHH-HHHHH
Q 010250          323 MF---GCDKYSIKPDLV--SFAKALSSAYMPIGAILV-SPE-VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAI-EALKI  394 (514)
Q Consensus       323 ~~---~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~-~~~-i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~-aal~~  394 (514)
                      .-   +-+.+. ..|.+  |++|+++   .|+|.+++ +++ +.+.+.......-.+...-||+|-.---..|+ ..|+.
T Consensus       245 si~eI~rE~~~-~aDsvt~slsKglg---ApvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e  320 (467)
T TIGR02617       245 SIEQITRETYK-YADMLAMSAKKDAM---VPMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYD  320 (467)
T ss_pred             CHHHHHHHhhc-cCCEEEEEcCCCCC---CcccceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhh
Confidence            10   001111 24554  5678876   57776665 433 33333322112223334457765322111112 13443


Q ss_pred             HhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEcc--CCCCCCCCCCccchHHHHHHHH-HHCCcEEE-
Q 010250          395 YKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFAD--NKSPNEPFPPEWGIGAYFGAQC-EKHGMLVR-  470 (514)
Q Consensus       395 ~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~-  470 (514)
                      .-+++...+--...++|.+.|.+. ..|++. +-|.+.+  ++-..  +..+...|+     +..++-.| ++-||-.. 
T Consensus       321 ~~~~~yl~~ri~qv~yl~~~L~~~-Gvpi~~-~Gghav~--iDa~~~lphip~~~fp-----a~al~~~ly~~~GiR~~e  391 (467)
T TIGR02617       321 GMNLDWLAYRINQVQYLVNGLEEI-GVVCQQ-AGGHAAF--VDAGKLLPHIPADQFP-----AHALACELYKVAGIRAVE  391 (467)
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhC-CCcEEe-cCccEEE--EehhhhCCCCChhhCc-----HHHHHHHHHHHcCcceEe
Confidence            333444444445567788888764 566665 4444332  22111  111111122     33344444 34454322 


Q ss_pred             ---------ee--------CCEEEEeCCC-CCCHHHHHHHHHHHHHHHHH
Q 010250          471 ---------VS--------GDNIMMSPPF-IMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       471 ---------~~--------g~~iRi~p~~-~~t~e~id~~~~~l~~~l~~  502 (514)
                               +.        -+-+|++.|- .-|.+++|...+++....++
T Consensus       392 ~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~  441 (467)
T TIGR02617       392 IGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN  441 (467)
T ss_pred             ecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence                     11        1348998884 45999999999998877653

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.21  E-value=1.1e-10  Score=113.38  Aligned_cols=194  Identities=18%  Similarity=0.206  Sum_probs=126.8

Q ss_pred             ccCCCCCHHHHHHHHHHHhc-CCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcC
Q 010250          112 TALGGSEPRLVAAATAQLNT-LPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG  190 (514)
Q Consensus       112 ~~lGh~~p~v~~A~~~~l~~-~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~  190 (514)
                      ..+.+.+++=.+++- +++. +..|++..+   +....|+++|+.+=++.   -.+.+.||..|...|+....       
T Consensus        33 Tsy~F~d~~haa~lF-~l~~~G~iYsRi~N---PT~~vlE~RiAaLEGG~---aa~a~aSG~AA~~~ai~~la-------   98 (426)
T COG2873          33 TSYVFDDTDHAAALF-GLKEPGNIYTRIMN---PTTDVLEERIAALEGGV---AALAVASGQAAITYAILNLA-------   98 (426)
T ss_pred             eeeecCCHHHHHHHh-CCCcCCceeeeccC---chHHHHHHHHHHhhcch---hhhhhccchHHHHHHHHHhc-------
Confidence            445555554333322 2343 334455433   33467889999884332   35678899999999987553       


Q ss_pred             CCCccEEEEEecCCcccc-eeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250          191 RPNKKKFIARQKSYHGST-LIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP  269 (514)
Q Consensus       191 ~~~~~~ii~~~~~yHG~t-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~  269 (514)
                       ...+.|++.+.-|-|.. +....       .+.+++...++   +.+                  +++.+++.|.    
T Consensus        99 -~aGD~iVss~~LYGGT~~lf~~t-------l~~~Gi~v~fv---d~~------------------d~~~~~~aI~----  145 (426)
T COG2873          99 -GAGDNIVSSSKLYGGTYNLFSHT-------LKRLGIEVRFV---DPD------------------DPENFEAAID----  145 (426)
T ss_pred             -cCCCeeEeeccccCchHHHHHHH-------HHhcCcEEEEe---CCC------------------CHHHHHHHhC----
Confidence             23578999888886652 11110       11223222221   111                  1367777775    


Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcc
Q 010250          270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYM  347 (514)
Q Consensus       270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~  347 (514)
                      +++++|.+|.+-++++.++.    +++|.++|+++|++||+|...+.      .+.+.......|||+  .+|.++|-+-
T Consensus       146 ~nTkavf~EtigNP~~~v~D----ie~ia~iAh~~gvpliVDNT~at------pyl~rP~~hGADIVvHS~TK~igGhGt  215 (426)
T COG2873         146 ENTKAVFAETIGNPGLDVLD----IEAIAEIAHRHGVPLIVDNTFAT------PYLCRPIEHGADIVVHSATKYIGGHGT  215 (426)
T ss_pred             cccceEEEEeccCCCccccC----HHHHHHHHHHcCCcEEEecCCCc------ceecchhhcCCCEEEEeecccccCCcc
Confidence            67899999999999998887    99999999999999999998652      244555555679885  6799999557


Q ss_pred             cceeEEeCHHHHHHh
Q 010250          348 PIGAILVSPEVSEVI  362 (514)
Q Consensus       348 pig~v~~~~~i~~~l  362 (514)
                      .||.+++..--.++-
T Consensus       216 ~iGG~iVD~G~FDw~  230 (426)
T COG2873         216 AIGGVIVDGGKFDWT  230 (426)
T ss_pred             ccceEEEeCCccccc
Confidence            889888865544544

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.16  E-value=9.1e-10  Score=112.70  Aligned_cols=233  Identities=15%  Similarity=0.180  Sum_probs=137.9

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      ++...+|+++++++.   +.+.++.++||+.|+.+++....        ..+++||+....|.+........      ..
T Consensus        63 ~P~~~~lE~~la~le---g~~~av~~sSG~aAi~~al~all--------~~GD~Vl~~~~~yg~t~~~~~~~------~~  125 (384)
T PRK06434         63 NPTVQAFEEKYAVLE---NAEHALSFSSGMGAITSAILSLI--------KKGKRILSISDLYGQTFYFFNKV------LK  125 (384)
T ss_pred             ChhHHHHHHHHHHHh---CCCcEEEeCCHHHHHHHHHHHHh--------CCCCEEEEecCccchHHHHHHHH------HH
Confidence            355678999999986   34578999999999999997653        23567888766665542111000      00


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++..   +..++.++                  .+.++     ..++++.+|++|.+.+..+.+++    +++|.++|+
T Consensus       126 ~~Gi~---v~fvd~~~------------------~~~~~-----l~~~~tklv~~e~~snpt~~v~D----i~~I~~la~  175 (384)
T PRK06434        126 TLGIH---VDYIDTDR------------------LNSLD-----FDPSNYDLIYAESITNPTLKVPD----IKNVSSFCH  175 (384)
T ss_pred             hcCcE---EEEECCCC------------------hhhee-----ecCCCeeEEEEEcCCCCCceeec----HHHHHHHHH
Confidence            01110   11111110                  01111     12346789999998888777766    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCc-ccceeEEe-CHHHHHHhhhccCCCCcccccCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAY-MPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTY  378 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~-~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~  378 (514)
                      ++|  +++|.++. -+.     .....+...|++++|  |.++|.. .-.|+++. ++++.+.+...       ......
T Consensus       176 ~~~--lvVD~t~~-s~~-----~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~-------~~~~G~  240 (384)
T PRK06434        176 END--VIVDATFA-SPY-----NQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVER-------RKTLGS  240 (384)
T ss_pred             HcC--eEEECCCC-Ccc-----cCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHH-------HHhcCC
Confidence            998  46699974 212     223334557988876  8888721 22355555 45665655421       111123


Q ss_pred             CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCcee----EEEeeeeeEEEEEc
Q 010250          379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----EIRGTGLILGTEFA  439 (514)
Q Consensus       379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----~v~g~g~~~~i~~~  439 (514)
                      ..+|+.++.++..|+.+.  ...++..++...+.+.|+..+.     +|...    ..+|.|.|+.|++.
T Consensus       241 ~~~~~~A~l~~~gL~tL~--~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~  308 (384)
T PRK06434        241 NPDPIQAYLALRGLKTLG--LRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELR  308 (384)
T ss_pred             CCCHHHHHHHHhCCCcHH--HHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEEC
Confidence            346777777766666553  3456666777777777765421     22110    12467889999986

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=99.15  E-value=6e-08  Score=96.19  Aligned_cols=312  Identities=14%  Similarity=0.151  Sum_probs=183.7

Q ss_pred             chHHHHHHHHHHhcCc-----C-CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC
Q 010250          144 KPSLDLAKELLEMFTA-----S-KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL  217 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~-----~-~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~  217 (514)
                      ....+|...+.+...+     . .--.++.+++-+.+.+.+++++.        ...+.|++=..+|.+.. .++-..|.
T Consensus       100 ~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~--------N~gd~vlie~~ty~~AL-~s~~a~gv  170 (472)
T KOG0634|consen  100 SGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLI--------NRGDHVLIEEYTYPSAL-QSMEALGV  170 (472)
T ss_pred             cCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhh--------cCCCceEEecccchHHH-HhccccCc
Confidence            3345666666665431     1 11378999999999999999886        34566777666775432 11111111


Q ss_pred             ccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC-----CcEEEEEEcc-ccCCCCcccCCh
Q 010250          218 PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP-----ETIAAFIAEP-VIGAGGVIPPPA  291 (514)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~-----~~~aavivEp-v~~~~G~~~p~~  291 (514)
                                    ..++++-    +-++        .+.+.|++.+..-.+     .+.....+=| -|+.+|... +.
T Consensus       171 --------------~~ipv~m----d~~G--------i~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tl-s~  223 (472)
T KOG0634|consen  171 --------------KIIPVKM----DQDG--------IDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTL-SL  223 (472)
T ss_pred             --------------eEEeccc----cCCC--------CCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCcc-CH
Confidence                          1111110    0111        124777777654221     1233444444 578888665 45


Q ss_pred             hHHHHHHHHHHhcCCEEEEechhcCcccccc----------cceecc---------cCCC-----CchhchhhhhcCCcc
Q 010250          292 TYFEKVQAVVKKYDILFIADEVICAFGRLGT----------MFGCDK---------YSIK-----PDLVSFAKALSSAYM  347 (514)
Q Consensus       292 ~~L~~l~~l~~~~gillI~DEv~tG~gr~G~----------~~~~~~---------~gv~-----pDiv~~sK~l~gG~~  347 (514)
                      +-=++|.+|++|||+++|-||+|- |-..+.          .+..+.         .+.+     ...-+|||-++-| .
T Consensus       224 errk~iy~LArKyDfLIVeDdpYy-~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPG-l  301 (472)
T KOG0634|consen  224 ERRKKIYQLARKYDFLIVEDDPYY-FLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPG-L  301 (472)
T ss_pred             HHHHHHHHHHHHcCEEEEecCccc-eeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCc-c
Confidence            667889999999999999999986 423321          000001         1111     1133799999988 8


Q ss_pred             cceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHH-------HHHHHHHHHhhhhhc-c
Q 010250          348 PIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQ-------VNKIAPKFQDGVKAF-S  419 (514)
Q Consensus       348 pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~-------~~~~~~~l~~~L~~l-~  419 (514)
                      ++|++.+++-+++.+...       ....|.+.+.+.+....+.|+...++++.+.       ...++..+...|.+. .
T Consensus       302 RlG~it~~~~~l~ril~~-------ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp  374 (472)
T KOG0634|consen  302 RLGWITGNSLFLKRILDL-------AEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLP  374 (472)
T ss_pred             eeEEeecCHHHHHHHhhh-------cceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence            999999999877776531       2223455566677777777777666544333       334445555555543 2


Q ss_pred             CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----------CC-EEEEeCCCCCCHH
Q 010250          420 DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----------GD-NIMMSPPFIMSPE  487 (514)
Q Consensus       420 ~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----------g~-~iRi~p~~~~t~e  487 (514)
                      ..-....+.--|++++++++-......  .......+.+...+.++||.+.++           +. .+|++.. ..+.|
T Consensus       375 ~~~~~~~~P~aGmFiwv~i~~~~~~~~--~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a-~a~~e  451 (472)
T KOG0634|consen  375 KSVCEYHPPKAGMFIWVEIPYINFDTK--KSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIA-FAEPE  451 (472)
T ss_pred             CCeeEEecCCcceEEEEEecccccccc--cchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEee-cCCHH
Confidence            221223445568899998862111000  001113445667788999998743           12 5888864 35677


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010250          488 EVDELISKYGKALKAT  503 (514)
Q Consensus       488 ~id~~~~~l~~~l~~~  503 (514)
                      ++++++++|..++++.
T Consensus       452 ~l~~g~~rf~~~ike~  467 (472)
T KOG0634|consen  452 KLDEGIERFGSVIKEH  467 (472)
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999999764

>PLN02452 phosphoserine transaminase

Probab=99.15  E-value=7.9e-09  Score=105.09  Aligned_cols=331  Identities=10%  Similarity=0.026  Sum_probs=189.8

Q ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHhcC--------CccccccccCCchHHHHHHHHHHhcCc-CCCCeEEEeCChh
Q 010250          102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTL--------PFYHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSGS  172 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~--------~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~~v~~~~sGs  172 (514)
                      .+.|..|-..     -+++|++++.+.+-+.        ..+|+. ....+...+..+.|.+++.- .+.+-+++..|||
T Consensus         8 ~~~f~pGP~~-----lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs-~~f~~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt   81 (365)
T PLN02452          8 VFNFSAGPAT-----LPANVLAKAQAELYNWEGSGMSVMEMSHRG-KEFLSIIQKAEADLRELLDIPDNYEVLFLQGGAS   81 (365)
T ss_pred             eEeeeCCCCC-----CCHHHHHHHHHHHhcccccCccccccCCCc-hHHHHHHHHHHHHHHHHhCCCCCceEEEEeCccH
Confidence            4456555322     4789999998875331        112211 01125556777888888752 2444455568999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee--cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS--LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE  250 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~--~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (514)
                      .++++++.-..        ++++++++...+++|....-..  .+.......            ..+..|.. .+.    
T Consensus        82 ~~~ea~~~nl~--------~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~------------~~~~~~~~-~~~----  136 (365)
T PLN02452         82 TQFAAIPLNLC--------KPGDKADFVVTGSWSKKAAKEAKKYCKTNVIAS------------GKDEKYTK-IPS----  136 (365)
T ss_pred             HHHHHHHHhcC--------CCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEe------------cCCCCCCC-CCC----
Confidence            99999987553        2346788888888776322211  111000000            00000000 000    


Q ss_pred             HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250          251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS  330 (514)
Q Consensus       251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g  330 (514)
                            ++++    . . +.++..|.+-.....+|+...+   ++++.      ++++|+|-+++ +|  +.....+.++
T Consensus       137 ------~~~~----~-~-~~~~~~v~~~hnETstGv~~~~---~~~i~------~~~lvVDa~Ss-~g--~~pidv~~~~  192 (365)
T PLN02452        137 ------VSEW----E-L-TPDAKFVHICANETIHGVEFKD---YPDVG------NVPLVADMSSN-FL--SKPVDVSKYG  192 (365)
T ss_pred             ------hHHc----C-C-CCCCcEEEECCCCCCCcEecCc---ccccC------CCeEEEECCcc-cc--CcccCHHHcC
Confidence                  1222    1 1 1345666666666666774222   44443      38999999998 43  2234455565


Q ss_pred             CCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCc----ccccCCCCC-cHHHHHHHHHHHHHHhhc-c---HH
Q 010250          331 IKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS----FSHGFTYSG-HPVSCAVAIEALKIYKER-N---IV  401 (514)
Q Consensus       331 v~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~----~~~~~t~~~-~pl~~aaa~aal~~~~~~-~---~~  401 (514)
                      +  |..+--|.+| . ..+|.+++++++.+.+.......-.    ....+++.. +-.+..+..++|+.++++ +   +.
T Consensus       193 v--~~~saqK~lG-P-~Gl~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~  268 (365)
T PLN02452        193 V--IYAGAQKNVG-P-SGVTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAME  268 (365)
T ss_pred             E--EEEecccccC-C-CCeEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHH
Confidence            5  5555569884 3 4589999999998776432111100    112234433 344566666889988764 3   56


Q ss_pred             HHHHHHHHHHHhhhhhccCC--CceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CEE
Q 010250          402 EQVNKIAPKFQDGVKAFSDS--PIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNI  476 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~--~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~i  476 (514)
                      ++.+++.+++++.|++....  +.+..-......+.+.+.+..           ..+.|.+.+.++|++..++.   ..+
T Consensus       269 ~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~~-----------~~~~f~~~~~~~g~~~~~G~r~~gg~  337 (365)
T PLN02452        269 KRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGSE-----------LEAEFVKEAAKAGMVQLKGHRSVGGM  337 (365)
T ss_pred             HHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCch-----------hHHHHHHHHHHCCCcccCCccccCce
Confidence            78888889999999875222  111100012234455544321           35678999999999986542   239


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          477 MMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       477 Ri~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      |++.--.++.++++.+++.+++.-++
T Consensus       338 R~s~yna~~~~~v~~L~~~m~~f~~~  363 (365)
T PLN02452        338 RASIYNAMPLAGVEKLVAFMKDFQAK  363 (365)
T ss_pred             EEECcCCCCHHHHHHHHHHHHHHHHh
Confidence            99977788999999999988877543

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=99.12  E-value=5.1e-09  Score=109.12  Aligned_cols=289  Identities=16%  Similarity=0.111  Sum_probs=160.1

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhh-----cCC
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA-----LGR  191 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~-----~~~  191 (514)
                      -++...+++...+.+.......+........+....+.+++....-..-.||++|||||..|+.+++..+.+     .+.
T Consensus        74 ~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~  153 (460)
T COG0076          74 VPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGK  153 (460)
T ss_pred             CHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccc
Confidence            356666777777765332211112234445556666777765433345689999999999999999766532     111


Q ss_pred             CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCc
Q 010250          192 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPET  271 (514)
Q Consensus       192 ~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~  271 (514)
                      +.+...|++....|-+..-+...-|.....            ++...           . ....|.+++++++.+.....
T Consensus       154 ~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~------------v~~~~-----------~-~~~id~~~l~~~i~~~t~~g  209 (460)
T COG0076         154 PGGKPNIVCSETAHFSFEKAARYLGLGLRR------------VPTVP-----------T-DYRIDVDALEEAIDENTIGG  209 (460)
T ss_pred             cCCCCeEEecCcchhHHHHHHHHhCCCcee------------EEecc-----------C-ccccCHHHHHHHHHhhccCc
Confidence            112225666778887765555444432211            00000           0 11233688888887532211


Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc-cccceec-ccCC-CCchhchh--hhhcCCc
Q 010250          272 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL-GTMFGCD-KYSI-KPDLVSFA--KALSSAY  346 (514)
Q Consensus       272 ~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~-G~~~~~~-~~gv-~pDiv~~s--K~l~gG~  346 (514)
                        +|+.--.....|.+-|    +++|.++|++||+++++|-++.||-.. -. -... .+++ ..|-++++  |-+-.. 
T Consensus       210 --~vV~~aGtT~~G~iDd----i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~-~~~~~~f~l~~vdSIt~d~HK~g~aP-  281 (460)
T COG0076         210 --VVVGTAGTTDTGSIDD----IEELADIAEEYGIWLHVDAAFGGFLLPFLE-PDGRWDFGLEGVDSITVDGHKYGLAP-  281 (460)
T ss_pred             --eEEEEecCCCCCccCC----HHHHHHHHHHcCCcEEEEccccceeecccC-ccchhhcCCCCceEEEECcccccCCC-
Confidence              2554444555677776    999999999999999999999887321 00 0011 1344 25666655  644444 


Q ss_pred             ccceeEEeCHH--HHHHhhhccCCCCc-ccccCCCCCcH--HHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHhhhhhc
Q 010250          347 MPIGAILVSPE--VSEVIHSQSNTLGS-FSHGFTYSGHP--VSCAVAIEALKIYKERN---IVEQVNKIAPKFQDGVKAF  418 (514)
Q Consensus       347 ~pig~v~~~~~--i~~~l~~~~~~~~~-~~~~~t~~~~p--l~~aaa~aal~~~~~~~---~~~~~~~~~~~l~~~L~~l  418 (514)
                      ++.|+++.+++  +.+.+.-.....+. .....|..++.  -..+++.++++.+..++   +.++.-+..+++.+.|+++
T Consensus       282 ~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~  361 (460)
T COG0076         282 IGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKL  361 (460)
T ss_pred             CCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhC
Confidence            67888888655  44444321111110 00111212222  24555667777775554   4555668888899888876


Q ss_pred             cCCCceeEEEeeeeeEEEEEc
Q 010250          419 SDSPIIGEIRGTGLILGTEFA  439 (514)
Q Consensus       419 ~~~~~~~~v~g~g~~~~i~~~  439 (514)
                      ....++.  .+...++.+.++
T Consensus       362 ~~~e~~~--~p~l~~V~fr~~  380 (460)
T COG0076         362 GDFELVN--EPELPIVAFRLK  380 (460)
T ss_pred             CCcEeec--CCccceEEEEcC
Confidence            2222222  234455666663

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=99.07  E-value=1.9e-08  Score=102.43  Aligned_cols=301  Identities=13%  Similarity=0.086  Sum_probs=167.9

Q ss_pred             chHHHHHHHHHHhcCc-CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccccee-ee-ecCCCccc
Q 010250          144 KPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI-AA-SLSGLPAL  220 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~-~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~-~~-~~s~~~~~  220 (514)
                      +...+..+.|.+++.. .+.+-++++.|||.++|+++....      . .++.++++. + +.|.... .+ ..-|.+  
T Consensus        39 ~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~------~-~~g~~vLv~-g-~FG~r~~~eia~~~g~~--  107 (374)
T TIGR01365        39 EKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSML------G-CRGVDVLAW-E-SFGKGWVTDVTKQLKLP--  107 (374)
T ss_pred             HHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcC------C-CCCCeEEEE-C-HHHHHHHHHHHHhcCCC--
Confidence            4556677888888752 233446668999999999997653      1 133466653 3 4454322 11 111110  


Q ss_pred             cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250          221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV  300 (514)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l  300 (514)
                               .+..+..+  |....           ++++++.      ...+..+..|   ..+|+..|    ++   ++
T Consensus       108 ---------~v~~l~~~--~g~~~-----------~~~~ve~------~~~v~~vhnE---TSTGv~np----v~---~i  149 (374)
T TIGR01365       108 ---------DVRVLEAE--YGKLP-----------DLKKVDF------KNDVVFTWNG---TTSGVRVP----NG---DF  149 (374)
T ss_pred             ---------CcEEEcCC--CCCCC-----------CHHHcCC------CCCEEEecCC---Cchheecc----cc---cc
Confidence                     01111111  11100           0234431      1234444444   34566766    44   44


Q ss_pred             HHh-cCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCC--C-C----
Q 010250          301 VKK-YDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNT--L-G----  370 (514)
Q Consensus       301 ~~~-~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~--~-~----  370 (514)
                      +++ +++++|+|-|-+ +|  |..+-.+  +  .|+++.|  |+|++. -.+|.++.+++.++.......+  . .    
T Consensus       150 ~~~~~~~lliVDavSs-~g--~~~l~~d--~--iDv~~tgsQK~L~~p-pGls~v~vs~~Al~~~~~~~~y~~~~~~~~~  221 (374)
T TIGR01365       150 IPADREGLTICDATSA-AF--AQDLDYH--K--LDVVTFSWQKVLGGE-GAHGMLILSPRAVARLESYTPAWPLPKIFRL  221 (374)
T ss_pred             ccccCCCcEEEEccch-hc--CCCCChh--H--CcEEEEechhccCCC-CceEEEEECHHHHHHHhhcCCCCCChhhhcc
Confidence            443 589999998865 54  2233333  2  6777655  999985 3578899999988776532110  0 0    


Q ss_pred             --------cccccCCCCCcH-HHHHHHHHHHHHHhhc-c---HHHHHHHHHHHHHhhhhhccCCCceeE--EEeeeeeEE
Q 010250          371 --------SFSHGFTYSGHP-VSCAVAIEALKIYKER-N---IVEQVNKIAPKFQDGVKAFSDSPIIGE--IRGTGLILG  435 (514)
Q Consensus       371 --------~~~~~~t~~~~p-l~~aaa~aal~~~~~~-~---~~~~~~~~~~~l~~~L~~l~~~~~~~~--v~g~g~~~~  435 (514)
                              ....+.|...+| .+..+...+|+.++++ +   ..++.+++++.++++++++........  -........
T Consensus       222 ~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~  301 (374)
T TIGR01365       222 TKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVC  301 (374)
T ss_pred             ccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEE
Confidence                    001123443333 4555566777766654 3   577888889999999998731222211  111222344


Q ss_pred             EEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          436 TEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       436 i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      +.+.+.......-...+.....+...|.++|+.+.++     ++.+||.-.-.++++||+.+++.|+=+..
T Consensus       302 v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~  372 (374)
T TIGR01365       302 LKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFA  372 (374)
T ss_pred             EEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence            4443321100000011223456888999999988753     46799999889999999999999986654

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>PLN02271 serine hydroxymethyltransferase

Probab=99.05  E-value=4.5e-08  Score=102.25  Aligned_cols=281  Identities=14%  Similarity=0.072  Sum_probs=152.7

Q ss_pred             EEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee-ecCCCccccCCCCCCCCcccccCCCCcccCC
Q 010250          165 VFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYA  243 (514)
Q Consensus       165 v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (514)
                      |... ||+.||.+++...+        .+.++|+..+..+-|+..-.. ...+......  +   -....++++      
T Consensus       218 VQp~-SGs~AN~aV~~ALl--------~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~s--G---~~~~~vpY~------  277 (586)
T PLN02271        218 VQPY-SCTSANFAVYTGLL--------LPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGA--S---IFFESLPYK------  277 (586)
T ss_pred             eeec-cHHHHHHHHHHHhc--------CCCCEEEEecCCCCCchhcccccccccccccc--c---ceEEEEEcc------
Confidence            4444 89999999987664        345789888876655522111 0011000000  0   001111111      


Q ss_pred             CCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc
Q 010250          244 HPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM  323 (514)
Q Consensus       244 ~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~  323 (514)
                      ..    ++....+.++++++...   .++.+|++......  ...+    +++++++|+++|++|++|-+|. .|-....
T Consensus       278 ~d----~~~g~IDyd~lek~a~~---~rPKLII~g~Sayp--r~~D----~~~i~eIAdevGA~LmvD~AH~-aGLIa~g  343 (586)
T PLN02271        278 VN----PQTGYIDYDKLEEKALD---FRPKILICGGSSYP--REWD----YARFRQIADKCGAVLMCDMAHI-SGLVAAK  343 (586)
T ss_pred             cc----cccCccCHHHHHHHhhh---cCCeEEEECchhcc--CcCC----HHHHHHHHHHcCCEEEEECccc-ccccccC
Confidence            00    01112345778875543   45678888664332  2233    8999999999999999999998 4433211


Q ss_pred             ceecccCCCCchhchh--hhhcCCcccceeEEeCHH--------------------HHHHhhhccCCCCcccccCCCCCc
Q 010250          324 FGCDKYSIKPDLVSFA--KALSSAYMPIGAILVSPE--------------------VSEVIHSQSNTLGSFSHGFTYSGH  381 (514)
Q Consensus       324 ~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~~~~--------------------i~~~l~~~~~~~~~~~~~~t~~~~  381 (514)
                      .....+. ..|+++.+  |+|.|.  +-|.++.+++                    +.+.+...     .|.  +..++.
T Consensus       344 ~~~sP~~-~aDvvt~TTHKtLrGP--rGG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~a-----VfP--glqgGp  413 (586)
T PLN02271        344 ECVNPFD-YCDIVTSTTHKSLRGP--RGGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFA-----VFP--SLQGGP  413 (586)
T ss_pred             cCCCCCc-CCcEEEeCCcccCCCC--CceEEEecccccccccCCccccccccccHHHHHHhhcc-----cCC--ccccCh
Confidence            1101111 36888654  999884  3366676654                    33333210     111  122222


Q ss_pred             HH-HHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHH
Q 010250          382 PV-SCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAY  457 (514)
Q Consensus       382 pl-~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~  457 (514)
                      .. ..++-..+++.+..   .+..+++.++.+.|.+.|.+. .+.++..-. ...++.+++.....          .+..
T Consensus       414 hn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggT-dnHlvLvDl~~~g~----------~G~~  481 (586)
T PLN02271        414 HNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGT-DNHLLLWDLTTLGL----------TGKN  481 (586)
T ss_pred             hHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCC-CcceeeecCcccCC----------CHHH
Confidence            22 22333334554443   346777888888898888764 444443211 12344455432210          1445


Q ss_pred             HHHHHHHCCcEEEe----e------CCEEEEeCCC----CCCHHHHHHHHHHHHHHHH
Q 010250          458 FGAQCEKHGMLVRV----S------GDNIMMSPPF----IMSPEEVDELISKYGKALK  501 (514)
Q Consensus       458 ~~~~l~~~Gv~~~~----~------g~~iRi~p~~----~~t~e~id~~~~~l~~~l~  501 (514)
                      ..+.|.+-||.+-.    .      .+.|||.-|.    .+.++|++++.+.|.++++
T Consensus       482 ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~  539 (586)
T PLN02271        482 YEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ  539 (586)
T ss_pred             HHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence            66677777888742    1      2458988764    3466899998888888876

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=99.03  E-value=2.5e-07  Score=88.68  Aligned_cols=344  Identities=16%  Similarity=0.144  Sum_probs=192.8

Q ss_pred             EEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHH-hc-CCccccccccCC----chHHHHHHHHHHhcCcCCCCeEEE
Q 010250           94 VYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQL-NT-LPFYHSFWNRTT----KPSLDLAKELLEMFTASKMAKVFF  167 (514)
Q Consensus        94 ~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l-~~-~~~~~~~~~~~~----~~~~ela~~L~~~~~~~~~~~v~~  167 (514)
                      +-+.+|-.|||-      ++||-.++.+.+...+.. +. ....-..|+...    +....+..+|+-+++ ....+|..
T Consensus        26 f~lp~~viyLdg------nSLGa~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiG-A~~~Evvv   98 (407)
T COG3844          26 FALPGGVIYLDG------NSLGARPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIG-ARAGEVVV   98 (407)
T ss_pred             ccCCCCeEEeec------cccccCchHHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhhc-CCCCceEE
Confidence            455677889985      678865545555544433 22 111111122122    233445555555553 45678888


Q ss_pred             eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccc-ceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCC
Q 010250          168 TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGS-TLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPG  246 (514)
Q Consensus       168 ~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~-t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (514)
                      ++|-+--+...+-.+.      ....+.+||++++.-.-. ...+-.+..   ..       .    ..    +      
T Consensus        99 ~dtts~nl~k~L~aal------r~~~~r~vIv~E~~~fpTdly~a~g~~~---~~-------~----~~----~------  148 (407)
T COG3844          99 TDTTSINLFKVLAAAL------RPQEGRRVIVSEGDNFPTDLYIAEGLAD---LL-------G----IG----Y------  148 (407)
T ss_pred             eCCcchHHHHHHHHHh------ccCCCceEEeecCCCCCcchhhhcchhh---hh-------c----cc----c------
Confidence            8876654444444443      112245666666533221 111100000   00       0    00    0      


Q ss_pred             CChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee
Q 010250          247 ETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC  326 (514)
Q Consensus       247 ~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~  326 (514)
                         +.+......++++.+.    ++++.|++..|+--+|....    +.+|-++++++|++++.|=.|+ .|-.    ..
T Consensus       149 ---~~~~~~~P~~~~~~~~----dd~AvV~L~~V~y~TGql~d----m~aiT~~AH~~galv~wDLAHs-aGav----p~  212 (407)
T COG3844         149 ---DLEGVIAPRALEEAIT----DDVAVVLLSHVNYKTGQLLD----MRAITALAHQHGALVGWDLAHS-AGAV----PV  212 (407)
T ss_pred             ---cceeeeChHHHHHhhc----cceEEEEeccccccccceee----HHHHHHHHHhcCceEEeehhcc-cCCc----ce
Confidence               0000011245666554    78999999999999998887    9999999999999999999998 3322    33


Q ss_pred             cccCCCCchh--chhhhhcCCcccceeEEeCHHHHHHhhhc-cC---CCCcccccCCC-----------CC-cHHHHHHH
Q 010250          327 DKYSIKPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQ-SN---TLGSFSHGFTY-----------SG-HPVSCAVA  388 (514)
Q Consensus       327 ~~~gv~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~-~~---~~~~~~~~~t~-----------~~-~pl~~aaa  388 (514)
                      +...-..|..  |-=|-|.||--..+++.+.++..+...+. +.   ..++|.....|           +. +-+++++.
T Consensus       213 ~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal  292 (407)
T COG3844         213 DLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAAL  292 (407)
T ss_pred             eecccCCCeeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHH
Confidence            3333334544  33487776533345566655544433221 00   00111111111           11 23456666


Q ss_pred             HHHHHHHhhc---cHHHHHHHHHHHHHhhhhhc-cCCCc--ee--EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHH
Q 010250          389 IEALKIYKER---NIVEQVNKIAPKFQDGVKAF-SDSPI--IG--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGA  460 (514)
Q Consensus       389 ~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l-~~~~~--~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  460 (514)
                      ..+|++..+-   +++++.-.+.++|.+.++.. ..+++  .+  .-..+|.-+++..+              .+..+.+
T Consensus       293 ~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp--------------~~~~V~q  358 (407)
T COG3844         293 EGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHP--------------HGYQVMQ  358 (407)
T ss_pred             hhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecC--------------cHHHHHH
Confidence            6788887653   35666666778888777664 22221  11  11223554555443              2566889


Q ss_pred             HHHHCCcEEEee-CCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          461 QCEKHGMLVRVS-GDNIMMSP-PFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       461 ~l~~~Gv~~~~~-g~~iRi~p-~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      .|.++||+.-.. .+.|||.| |++.+-+|+=.+++.|++++++..
T Consensus       359 aLi~rGVigD~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a  404 (407)
T COG3844         359 ALIDRGVIGDFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLA  404 (407)
T ss_pred             HHHHcCccccccCCCeeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence            999999987643 46799987 488999999999999999987643

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.03  E-value=6.3e-10  Score=109.39  Aligned_cols=247  Identities=19%  Similarity=0.196  Sum_probs=137.0

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccE
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK  196 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~  196 (514)
                      .+|++.+|+.+.. ...   .. .+..+...++++++++++   +.+.++|+.||+.||..+++...        .+...
T Consensus         7 ~~~~m~~a~~~a~-~gd---~~-Yg~D~~~~~l~~~i~~l~---g~e~a~f~~sGT~An~~al~~~~--------~~~~~   70 (290)
T PF01212_consen    7 PTPAMLEAMAAAN-VGD---DA-YGEDPTTARLEERIAELF---GKEAALFVPSGTMANQLALRAHL--------RPGES   70 (290)
T ss_dssp             S-HHEEHHHHHTT-SB----CC-TTSSHHHHHHHHHHHHHH---TSSEEEEESSHHHHHHHHHHHHH--------HTTEE
T ss_pred             CCHHHHHHHHccc-cCC---cc-cCCChhHHHHHHHHHHHc---CCCEEEEeCCCChHHHHHHHHHH--------hcCCc
Confidence            6899999994433 221   11 235667789999999998   45788999999999999999775        12345


Q ss_pred             EEEEecCCcc--cceeee-ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC--Cc
Q 010250          197 FIARQKSYHG--STLIAA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP--ET  271 (514)
Q Consensus       197 ii~~~~~yHG--~t~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~--~~  271 (514)
                      ||.-+. -|-  ...++. .++|....            .++..+             .+..++++|++.+.....  .+
T Consensus        71 vi~~~~-aHi~~~E~ga~~~~~G~~~~------------~l~~~~-------------~G~l~~~~l~~~~~~~~~h~~~  124 (290)
T PF01212_consen   71 VICADT-AHIHFDETGAIEELSGAKLI------------PLPSDD-------------DGKLTPEDLEAAIEEHGAHHPQ  124 (290)
T ss_dssp             EEEETT-EHHHHSSTTHHHHHTTCEEE------------EEBECT-------------GTBB-HHHHHHHHHHHTGTSGG
T ss_pred             eecccc-ceeeeeccchhhHhcCcEEE------------ECCCcc-------------cCCCCHHHHHHHhhhccccCCC
Confidence            555443 332  222222 22332111            011000             011226889988877443  57


Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc--CcccccccceecccCCCCchhch--hhhhcCCcc
Q 010250          272 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC--AFGRLGTMFGCDKYSIKPDLVSF--AKALSSAYM  347 (514)
Q Consensus       272 ~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t--G~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG~~  347 (514)
                      +++|.+|-.....|-.+++.+.|++|.++|++||+.|++|-+--  .....|.. ..+.. --.|++++  +|.++   .
T Consensus       125 ~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~-~~e~~-~~~D~v~~~~tK~~g---~  199 (290)
T PF01212_consen  125 PAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVS-LAEIA-AGADSVSFGGTKNGG---A  199 (290)
T ss_dssp             EEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHH-HHHHH-TTSSEEEEETTSTT----S
T ss_pred             ccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhccccc-HHHHh-hhCCEEEEEEEcccc---c
Confidence            89999998888755567788999999999999999999996521  00001110 01111 23577765  47655   4


Q ss_pred             ccee-EEeCHHHHHHhhhccCCCCcccccCCC--CCcHHHH-----HHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc
Q 010250          348 PIGA-ILVSPEVSEVIHSQSNTLGSFSHGFTY--SGHPVSC-----AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF  418 (514)
Q Consensus       348 pig~-v~~~~~i~~~l~~~~~~~~~~~~~~t~--~~~pl~~-----aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l  418 (514)
                      |.|+ +++++++++......    . ..|+..  .+ .+++     .+++.+++..  .....+..++.+++.+.|+.+
T Consensus       200 ~~Gavl~~~~~~i~~~~~~~----k-~~gg~~~~~G-~~~a~~~~~~~~l~~l~~~--~~~~~~~~~~A~~La~~l~~~  270 (290)
T PF01212_consen  200 PGGAVLAGNKEFIAKARRQR----K-RLGGGMRQAG-VLAAAELYQFAALRALELW--LERARHANAMAKRLAAGLEAL  270 (290)
T ss_dssp             SSEEEEEESHHHHHHHHHHH----H-HHTHHHHHTT-HHHHHHHHHHHHHCHEECS--HHHHHCHHHHHHCHHHCHHEE
T ss_pred             ccceEEEechHHHHHHHHHH----H-HhccCeeecc-eeeeechhhHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHC
Confidence            5555 556888654433210    0 111111  11 1111     0222221110  134566777888888888876

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.00  E-value=3.4e-07  Score=90.31  Aligned_cols=330  Identities=18%  Similarity=0.171  Sum_probs=183.9

Q ss_pred             CCHHHHHHHHHHHh-cCCcc---ccccccC--CchHHHHHH-HHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhh
Q 010250          117 SEPRLVAAATAQLN-TLPFY---HSFWNRT--TKPSLDLAK-ELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNA  188 (514)
Q Consensus       117 ~~p~v~~A~~~~l~-~~~~~---~~~~~~~--~~~~~ela~-~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~  188 (514)
                      ..|.|++|.-..+. ++...   .++|++.  .+..++|+- +..++|+   .+.+-. -.||+.||.+++....     
T Consensus        38 ~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFg---a~~anVQPhSGs~AN~av~~All-----  109 (413)
T COG0112          38 TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFG---AEYANVQPHSGSQANQAVYLALL-----  109 (413)
T ss_pred             CCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhC---CCccccCCCCchHHHHHHHHHHc-----
Confidence            46888888877764 33322   2455543  344445543 4445553   233322 4589999999887664     


Q ss_pred             cCCCCccEEEEEecCCcccc-ee-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHH
Q 010250          189 LGRPNKKKFIARQKSYHGST-LI-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILK  266 (514)
Q Consensus       189 ~~~~~~~~ii~~~~~yHG~t-~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~  266 (514)
                         ...++|+..+-+.-|+. .+ ..+.+|.- +           ..+++|-      .    .+-...|.+.++++..+
T Consensus       110 ---~pGDtimgm~l~~GGHltHg~~v~~sG~~-~-----------~~v~Y~v------d----~et~~IDyD~~~k~a~e  164 (413)
T COG0112         110 ---QPGDTIMGLDLSHGGHLTHGSPVNFSGKL-F-----------NVVSYGV------D----PETGLIDYDEVEKLAKE  164 (413)
T ss_pred             ---CCCCeEecccCCCCCcccCCCCCCcccee-E-----------EeEeccc------c----cccCccCHHHHHHHHHH
Confidence               34578888766554442 22 22222221 0           1111110      0    01122346889998887


Q ss_pred             hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhchh--hhhc
Q 010250          267 EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSFA--KALS  343 (514)
Q Consensus       267 ~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~s--K~l~  343 (514)
                      ..|+   .||+=.  +..--..+    +++++++|++.|++|.+|-+|- |+--.|. +. .... ..|+||-+  |.|-
T Consensus       165 ~kPK---~ii~G~--SaY~r~id----~~~~reIad~VGA~L~~DmAHiaGLVA~G~-~p-~P~~-~AdvVTtTTHKTlr  232 (413)
T COG0112         165 VKPK---LIIAGG--SAYSRPID----FKRFREIADEVGAYLMVDMAHVAGLIAGGV-HP-NPLP-HADVVTTTTHKTLR  232 (413)
T ss_pred             hCCC---EEEECc--cccccccC----HHHHHHHHHHhCceEEehHHHHHHHHhccc-CC-CCCC-ccceEeCCcccCCC
Confidence            6653   333311  11111223    8999999999999999999875 4422221 11 1111 26888654  8999


Q ss_pred             CCcccceeEEeCH-HHHHHhhhccCCCCcccccCCCCCcHH-HHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhc
Q 010250          344 SAYMPIGAILVSP-EVSEVIHSQSNTLGSFSHGFTYSGHPV-SCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAF  418 (514)
Q Consensus       344 gG~~pig~v~~~~-~i~~~l~~~~~~~~~~~~~~t~~~~pl-~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l  418 (514)
                      |  -+-|.+++++ ++.+.+.+.       ..-++.+++-+ ..|+-..++....+.   +..+++.++.+.|.+.|.+.
T Consensus       233 G--PrGG~Il~~~eel~kkin~a-------VFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~  303 (413)
T COG0112         233 G--PRGGIILTNDEELAKKINSA-------VFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER  303 (413)
T ss_pred             C--CCceEEEeccHHHHHHhhhh-------cCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc
Confidence            8  4667788874 888888741       11123333322 222222334443333   45677888888888888774


Q ss_pred             cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe----e-------CCEEEEeCCCC----
Q 010250          419 SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV----S-------GDNIMMSPPFI----  483 (514)
Q Consensus       419 ~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~----~-------g~~iRi~p~~~----  483 (514)
                       .+.++..-. ...++.+++.+...          -++.....|.+-||.+-.    .       .+.||+.-|..    
T Consensus       304 -G~~vvsGgT-dnHl~lVDl~~~~~----------~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG  371 (413)
T COG0112         304 -GFKVVSGGT-DNHLVLVDLRSKGL----------TGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRG  371 (413)
T ss_pred             -CCeEecCCc-cceEEEEEcccCCC----------CHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcC
Confidence             333333111 22345556552211          144455667777887752    1       24599988754    


Q ss_pred             CCHHHHHHHHHHHHHHHHH-------HHHHHHHhhh
Q 010250          484 MSPEEVDELISKYGKALKA-------TEERVKELKS  512 (514)
Q Consensus       484 ~t~e~id~~~~~l~~~l~~-------~~~~~~~~~~  512 (514)
                      +.++|..++.+.|.+++..       +++++.+++.
T Consensus       372 ~~e~e~~~Ia~~I~~vl~~~~~~~~~vk~~V~~l~~  407 (413)
T COG0112         372 FGEAEMEEIADLIADVLDGLKDVPAEVKEEVAELCR  407 (413)
T ss_pred             CCHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHH
Confidence            4568888888888888763       5555555543

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=98.99  E-value=1.3e-07  Score=106.22  Aligned_cols=319  Identities=12%  Similarity=0.116  Sum_probs=171.6

Q ss_pred             ccCCC-CCHHHHHHHHHHHhcCCcccccc----ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHH
Q 010250          112 TALGG-SEPRLVAAATAQLNTLPFYHSFW----NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYN  186 (514)
Q Consensus       112 ~~lGh-~~p~v~~A~~~~l~~~~~~~~~~----~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~  186 (514)
                      .+.+| -++.|.+++.+..+.+..|+++.    .+..+...++...+++++ +.+.+++-++.++|.+.++++...+ . 
T Consensus       111 G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~Lt-G~~~anaSL~d~aTAaaea~~~a~~-~-  187 (993)
T PLN02414        111 GYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLT-GLPMSNASLLDEGTAAAEAMAMCNN-I-  187 (993)
T ss_pred             CCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHh-CCChhhEeecCChHHHHHHHHHHHh-c-
Confidence            44455 45666688877665433333221    122233456677788876 3456789999999999997765432 1 


Q ss_pred             hhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHH
Q 010250          187 NALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILK  266 (514)
Q Consensus       187 ~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~  266 (514)
                         ...++++|++.+..| +.+...+..     +.+..++   .+..++.                     ++..     
T Consensus       188 ---~~g~~~~VlVs~~~h-P~~~~v~~t-----~a~~~Gi---eV~~v~~---------------------~~~~-----  229 (993)
T PLN02414        188 ---LKGKKKKFLIASNCH-PQTIDVCQT-----RADGLGL---EVVVADE---------------------KDFD-----  229 (993)
T ss_pred             ---ccCCCCEEEEcCccC-HhHHHHHHH-----hhhhcCC---EEEEecc---------------------hhhc-----
Confidence               111345676665555 433222210     0011110   0111111                     1100     


Q ss_pred             hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hh---
Q 010250          267 EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KA---  341 (514)
Q Consensus       267 ~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~---  341 (514)
                      ...+.+++++ -.+++..|.+.|    +++|.++|+++|+++++ -++. ++-.+-   ...-.+..|+++.+  |.   
T Consensus       230 ~~~~~v~~vl-vq~P~~~G~v~d----v~~I~~~ah~~GaL~iV-aad~-lal~~l---~~pge~GADi~vgsgqKwg~P  299 (993)
T PLN02414        230 YSSGDVCGVL-VQYPATDGEVLD----YAEFVKNAHANGVKVVM-ATDL-LALTML---KPPGEWGADIVVGSAQRFGVP  299 (993)
T ss_pred             cccCceEEEE-EecCCCCeEEcC----HHHHHHHHHHcCCEEEE-EECH-HHhcCC---CCHhhccCcEEEECCCccccC
Confidence            0123566665 345556788877    99999999999999999 3332 221110   01112345887643  32   


Q ss_pred             hcCCcccceeEEeCHHHHHHhhhc--cCCC---C--cc--------ccc--CCCCCcH---HHHHHHHHHH--HHHhhc-
Q 010250          342 LSSAYMPIGAILVSPEVSEVIHSQ--SNTL---G--SF--------SHG--FTYSGHP---VSCAVAIEAL--KIYKER-  398 (514)
Q Consensus       342 l~gG~~pig~v~~~~~i~~~l~~~--~~~~---~--~~--------~~~--~t~~~~p---l~~aaa~aal--~~~~~~-  398 (514)
                      +++|+-..|++++++++...+...  ++..   +  .+        .|.  -....|.   .++.+++++.  ..+... 
T Consensus       300 ~G~GGP~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~G  379 (993)
T PLN02414        300 MGYGGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEG  379 (993)
T ss_pred             CCCCCCCeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhcccc
Confidence            332323488899999886644310  0000   0  00        000  0001122   2333333332  222222 


Q ss_pred             --cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCE
Q 010250          399 --NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDN  475 (514)
Q Consensus       399 --~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~  475 (514)
                        ++.+++..+..+++++|+++ ...+... .-.+ .+.+.+.  .            ...+.++|.++||.++.. ++.
T Consensus       380 l~~Ia~ri~~la~~l~~~L~~~-G~~~~~~-~~f~-~vt~~~~--~------------~~~v~~~L~~~gI~l~~~~~~~  442 (993)
T PLN02414        380 LKTIAQRVHGLAGVFAAGLKKL-GFQVQSL-PFFD-TVKVKCS--D------------ADAIADAAAKVGINLRVVDANT  442 (993)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhc-CCccCCC-CCcC-eEEEecC--C------------HHHHHHHHHHCCCeeEEecCCe
Confidence              45678888999999999764 2222211 0011 2223321  1            245788999999998865 467


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~  498 (514)
                      +|+++....|++|||.++++|..
T Consensus       443 lrvs~~e~~T~edId~L~~~l~~  465 (993)
T PLN02414        443 VTVSFDETTTLEDVDKLFKVFAG  465 (993)
T ss_pred             EEEEeeccCCHHHHHHHHHHHcc
Confidence            99999999999999999999963

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=98.98  E-value=8.9e-08  Score=96.59  Aligned_cols=318  Identities=13%  Similarity=0.098  Sum_probs=179.0

Q ss_pred             CHHHHHHHHHHHhcCC--------ccccccccCCchHHHHHHHHHHhcCc-CCCCeEEEeCChhHHHHHHHHHHHHHHhh
Q 010250          118 EPRLVAAATAQLNTLP--------FYHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEANDTQVKLVWYYNNA  188 (514)
Q Consensus       118 ~p~v~~A~~~~l~~~~--------~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~~v~~~~sGseA~~~Alk~a~~~~~~  188 (514)
                      +++|++++++.+-+..        .+|+. ....+...+..+.|.+++.- .+.+-+++..|||.+.++++.-..     
T Consensus        16 p~~Vl~~~~~~~~~~~~~g~si~eisHRs-~~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll-----   89 (364)
T PRK12462         16 PDTVLEQVRQAVVELPETGLSVLGMSHRS-SWFSSLLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFS-----   89 (364)
T ss_pred             CHHHHHHHHHHHhcccccCcccccccccc-HHHHHHHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcC-----
Confidence            7889999887775421        12221 11134556677778887742 234334445569999998886553     


Q ss_pred             cCCCCccEEE-EEecCCcccceeeee-cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHH
Q 010250          189 LGRPNKKKFI-ARQKSYHGSTLIAAS-LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILK  266 (514)
Q Consensus       189 ~~~~~~~~ii-~~~~~yHG~t~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~  266 (514)
                         .++++++ +...+++|....... .-+..  .....         ..+..|.. .|.          .+++     +
T Consensus        90 ---~~g~~~~~~~~tG~fg~r~~~ea~~~g~v--~~~~~---------~~~~~~~~-~p~----------~~~~-----~  139 (364)
T PRK12462         90 ---RPGAAAPEYVTTGYWSRKAIGEASRVAAM--RVVWD---------GAASGYRT-LPS----------LAEL-----D  139 (364)
T ss_pred             ---CCCCcEEEEEeCCHHHHHHHHHHHhcCCc--eEecC---------cCCCCCCc-CCC----------HHHh-----c
Confidence               2234455 666777675321111 00100  00000         00000000 000          1221     1


Q ss_pred             hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcC
Q 010250          267 EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSS  344 (514)
Q Consensus       267 ~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~g  344 (514)
                      .. ++...|.+-.....+|+..+         ++.+.+++++|+|-+=+ +  .+..+-++.|    |++..|  |+|+ 
T Consensus       140 ~~-~d~~~v~~t~NETstGv~~~---------~~~~~~~~llvvD~sS~-~--~s~pid~~~~----dvi~agsQKnlg-  201 (364)
T PRK12462        140 WD-ARAPFRHYVSNETVEGLQFP---------DAAGLPDSPLIADMSSD-F--MSRPFDVEAY----GMVYAHAQKNLG-  201 (364)
T ss_pred             cC-CCCcEEEEccCCCCceEecC---------cccccCCCeEEEEcCch-h--hCCCCChHHc----cEEEeeccccCC-
Confidence            11 24556666666666677765         22233699999998865 4  2223444444    777665  9997 


Q ss_pred             CcccceeEEeCHHHHHHhhhccCCC-C---cccccCCCCCcH-HHHHHHHHHHHHHhhc--c---HHHHHHHHHHHHHhh
Q 010250          345 AYMPIGAILVSPEVSEVIHSQSNTL-G---SFSHGFTYSGHP-VSCAVAIEALKIYKER--N---IVEQVNKIAPKFQDG  414 (514)
Q Consensus       345 G~~pig~v~~~~~i~~~l~~~~~~~-~---~~~~~~t~~~~p-l~~aaa~aal~~~~~~--~---~~~~~~~~~~~l~~~  414 (514)
                      . ..++.++.+++.++........+ .   .....+++...| ...-+...+|+.+.++  +   +.++.+++++.+++.
T Consensus       202 P-~Gltvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~  280 (364)
T PRK12462        202 P-AGVTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYAT  280 (364)
T ss_pred             C-CceEEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHH
Confidence            4 56888999999987765311000 0   001234554444 4566666888988766  4   467778888889988


Q ss_pred             hhhcc-CCCceeEEEeeeeeE-EEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CEEEEeCCCCCCHHHH
Q 010250          415 VKAFS-DSPIIGEIRGTGLIL-GTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEV  489 (514)
Q Consensus       415 L~~l~-~~~~~~~v~g~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~iRi~p~~~~t~e~i  489 (514)
                      +++.. -+....+..-++.|. .|.+.+.           .+...|.+.+.++|+....+.   +.+|.+.--.++.|++
T Consensus       281 id~~~~~~~~~~~~~~RS~mnv~f~~~~~-----------~l~~~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v  349 (364)
T PRK12462        281 LDALNEVIDCHAHRAARSTMNVAFRFRQP-----------RLDTLFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAV  349 (364)
T ss_pred             HHhCCCcccCCCChhhcCcceEEEEcCCH-----------HHHHHHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHH
Confidence            88763 222222222333332 2233221           246678899999999875321   3499997778899999


Q ss_pred             HHHHHHHHHHHH
Q 010250          490 DELISKYGKALK  501 (514)
Q Consensus       490 d~~~~~l~~~l~  501 (514)
                      +.+++-+++.-+
T Consensus       350 ~~L~~fm~~f~~  361 (364)
T PRK12462        350 SRLCAFLKDFAI  361 (364)
T ss_pred             HHHHHHHHHHHH
Confidence            999998887654

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=98.96  E-value=4e-08  Score=98.34  Aligned_cols=191  Identities=17%  Similarity=0.233  Sum_probs=123.3

Q ss_pred             chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250          144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK  223 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~  223 (514)
                      +....+++.++++-   +...++.++||..|...|+....        +...+|+.++..|.|.......      +...
T Consensus        77 Pt~~~le~~iaal~---ga~~~l~fsSGmaA~~~al~~L~--------~~g~~iV~~~~~Y~gT~~~l~~------~~~~  139 (409)
T KOG0053|consen   77 PTRDVLESGIAALE---GAAHALLFSSGMAAITVALLHLL--------PAGDHIVATGDVYGGTLRILRK------FLPK  139 (409)
T ss_pred             CchHHHHHHHHHHh---CCceEEEecccHHHHHHHHHHhc--------CCCCcEEEeCCCcccHHHHHHH------HHHH
Confidence            34456778888875   44579999999999999998765        5667899999999886311110      0001


Q ss_pred             CCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 010250          224 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK  303 (514)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~  303 (514)
                      |+....+                        .+.++++++..... +++.+|++|.+-++...++.    +++|+++|++
T Consensus       140 ~gie~~~------------------------vd~~~~~~~~~~i~-~~t~~V~~ESPsNPll~v~D----I~~l~~la~~  190 (409)
T KOG0053|consen  140 FGGEGDF------------------------VDVDDLKKILKAIK-ENTKAVFLESPSNPLLKVPD----IEKLARLAHK  190 (409)
T ss_pred             hCceeee------------------------echhhHHHHHHhhc-cCceEEEEECCCCCcccccc----HHHHHHHHhh
Confidence            1111010                        11234444333322 37899999999888877766    9999999999


Q ss_pred             cCCEEEEechhcCcccccccceecccCCCCchhch--hhhhcCCcc-cceeEEeC-HHHHHHhhhccCCCCcccccCCCC
Q 010250          304 YDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSAYM-PIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYS  379 (514)
Q Consensus       304 ~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG~~-pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~  379 (514)
                      +|+++|+|+...+.      .-++.+..-.|||+-  .|-|+|.-= -.|.++.+ +++...+...       ...--+.
T Consensus       191 ~g~~vvVDnTf~~p------~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~-------~~~lg~~  257 (409)
T KOG0053|consen  191 YGFLVVVDNTFGSP------YNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFL-------QEDLGWC  257 (409)
T ss_pred             CCCEEEEeCCcCcc------cccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHH-------HHHhcCC
Confidence            99999999987643      234555555899964  598988422 23455554 7777766531       1222345


Q ss_pred             CcHHHHHHHHHHHH
Q 010250          380 GHPVSCAVAIEALK  393 (514)
Q Consensus       380 ~~pl~~aaa~aal~  393 (514)
                      .+|..|.-....++
T Consensus       258 ~~p~~~~ll~Rglk  271 (409)
T KOG0053|consen  258 EDPFDLFLLSRGLK  271 (409)
T ss_pred             CCHHHHHHHhcCcc
Confidence            67777766555444

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=98.93  E-value=3.8e-08  Score=99.65  Aligned_cols=239  Identities=18%  Similarity=0.203  Sum_probs=139.3

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      ++....|++.++++=   +-+.++.++||..|+.+++....        ...++|+..+..|.|........      .+
T Consensus        62 nPT~~~lE~~~a~LE---g~~~~~afsSGmaAI~~~~l~ll--------~~GD~vl~~~~~YG~t~~~~~~~------l~  124 (396)
T COG0626          62 NPTRDALEEALAELE---GGEDAFAFSSGMAAISTALLALL--------KAGDHVLLPDDLYGGTYRLFEKI------LQ  124 (396)
T ss_pred             CccHHHHHHHHHHhh---CCCcEEEecCcHHHHHHHHHHhc--------CCCCEEEecCCccchHHHHHHHH------HH
Confidence            445678889998874   45679999999999999876654        33588999988887753211110      01


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .+++...+   ++         +.         +.+.+++.+.   ++++.+|++|+.-|..-.++.    +++|.++|+
T Consensus       125 ~~gi~~~~---~d---------~~---------~~~~~~~~~~---~~~tk~v~lEtPsNP~l~v~D----I~~i~~~A~  176 (396)
T COG0626         125 KFGVEVTF---VD---------PG---------DDEALEAAIK---EPNTKLVFLETPSNPLLEVPD----IPAIARLAK  176 (396)
T ss_pred             hcCeEEEE---EC---------CC---------ChHHHHHHhc---ccCceEEEEeCCCCccccccc----HHHHHHHHH
Confidence            12111000   00         00         0123333333   247899999999888777776    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCc-ccceeEEeCH-HHHHHhhhccCCCCcccccCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAY-MPIGAILVSP-EVSEVIHSQSNTLGSFSHGFTY  378 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~-~pig~v~~~~-~i~~~l~~~~~~~~~~~~~~t~  378 (514)
                      ++|+++|+|.+....      ..++.+..-.||++  ..|-++|.. .-.|+++++. ++.+.+...     ... ....
T Consensus       177 ~~g~~vvVDNTfatP------~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~-----~~~-~~G~  244 (396)
T COG0626         177 AYGALVVVDNTFATP------VLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFA-----QRA-NTGA  244 (396)
T ss_pred             hcCCEEEEECCcccc------cccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHH-----HHh-hcCC
Confidence            999999999987632      23444444578886  559888842 2234455454 455544211     001 0112


Q ss_pred             CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250          379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD  440 (514)
Q Consensus       379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~  440 (514)
                      ..+|..+-..+..|+.+.-  ..++..+++..+.+.|++-.     -+|...          ...|.|.++.|++..
T Consensus       245 ~l~p~dA~l~lRGlkTL~~--Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~  319 (396)
T COG0626         245 VLSPFDAWLLLRGLRTLAL--RMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN  319 (396)
T ss_pred             CCCHHHHHHHHhccchHHH--HHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC
Confidence            2346655555555554421  13444455555555554421     122111          123578899999976

>PRK05367 glycine dehydrogenase; Provisional

Probab=98.90  E-value=4e-07  Score=102.76  Aligned_cols=285  Identities=12%  Similarity=0.135  Sum_probs=158.4

Q ss_pred             chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCC-ccEEEEEecCCcccceeeeecCCCccccC
Q 010250          144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPN-KKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~-~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      +...++...+++++ +.+..++.+..++|.+.++++... .++     ++ +++|++.+..| ..+...+...     .+
T Consensus       121 eal~~~Qt~la~Lt-G~~~anaSl~d~aTAa~ea~~~a~-~~~-----~~~~~~vlv~~~~h-P~~~~v~~t~-----a~  187 (954)
T PRK05367        121 EALLNFQTMVADLT-GLEIANASLLDEATAAAEAMALAK-RVS-----KSKSNRFFVDDDVH-PQTLDVLRTR-----AE  187 (954)
T ss_pred             HHHHHHHHHHHHHH-CCChhhccccccHHHHHHHHHHhh-hhc-----cCCCCEEEEcCccC-HHHHHHHHHH-----HH
Confidence            34445667788876 345567889999999999665433 221     22 35677766555 4332221100     00


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      ..+.   .+..++.+                    ++++       .++++++++ .+++..|.+.+    +++|.++|+
T Consensus       188 ~~G~---ev~~~~~~--------------------~d~~-------~~~~~~vlv-q~p~~~G~i~d----~~~i~~~ah  232 (954)
T PRK05367        188 PLGI---EVVVGDAA--------------------KALD-------HDDVFGVLL-QYPGTSGEVRD----YTALIAAAH  232 (954)
T ss_pred             hCCC---EEEEecCc--------------------cCCC-------cccEEEEEE-ecCCCCeeecc----HHHHHHHHH
Confidence            0110   01111110                    0111       235666544 45677888886    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhchh--hh---hcCCcccceeEEeCHHHHHHhhhccCC-----CC--
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KA---LSSAYMPIGAILVSPEVSEVIHSQSNT-----LG--  370 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~---l~gG~~pig~v~~~~~i~~~l~~~~~~-----~~--  370 (514)
                      ++|+++++|-.+..++.. +    ..-.+..|+++.+  |.   ++.|+-..|++.+++++...+...--.     .+  
T Consensus       233 ~~Gal~~vda~~~Al~~l-~----~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~  307 (954)
T PRK05367        233 ARGALVAVAADLLALTLL-T----PPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNP  307 (954)
T ss_pred             HcCCEEEEEehhhhccCC-C----ChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHHHHhhCCCCeeeeecccCCCc
Confidence            999999999866322111 1    1112345777543  42   333334488889999887776431000     00  


Q ss_pred             -------------cccccCCCCCcHHHHHHHHHH--HHHHhhc---cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeee
Q 010250          371 -------------SFSHGFTYSGHPVSCAVAIEA--LKIYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGL  432 (514)
Q Consensus       371 -------------~~~~~~t~~~~pl~~aaa~aa--l~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~  432 (514)
                                   .+..+...-....+..+..++  +..+..+   ++.+++..+..+++++|+.. ...+..... .+ 
T Consensus       308 ~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~-G~~~~~~~~-f~-  384 (954)
T PRK05367        308 ALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL-GLEVVHDSF-FD-  384 (954)
T ss_pred             ccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc-CcccCCCCC-CC-
Confidence                         011111011112222223332  2333333   45677888889999988763 222221110 01 


Q ss_pred             eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEEEeCCCCCCHHHHHHHHHHHH
Q 010250          433 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMMSPPFIMSPEEVDELISKYG  497 (514)
Q Consensus       433 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iRi~p~~~~t~e~id~~~~~l~  497 (514)
                      .+.+.+.  .           ....+.++|.++||.++.. ++.+|++|....|++|||.++++|.
T Consensus       385 ~~~~~~~--~-----------~~~~i~~~l~~~gi~~~~~~~~~l~is~~e~~t~~did~l~~~l~  437 (954)
T PRK05367        385 TLTVEVG--G-----------DAAAVLARALAAGINLRRVDDDHVGISLDETTTREDLAALLAVFG  437 (954)
T ss_pred             eEEEeCC--C-----------CHHHHHHHHHHCCceeccccCCEEEEEecccCCHHHHHHHHHHHc
Confidence            1122221  0           1456889999999999765 5679999999999999999999997

>PRK15029 arginine decarboxylase; Provisional

Probab=98.87  E-value=6.9e-07  Score=97.85  Aligned_cols=231  Identities=16%  Similarity=0.164  Sum_probs=125.2

Q ss_pred             chHHHHHHHHHHhcCcCCCCeEEEe-CChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-ccc
Q 010250          144 KPSLDLAKELLEMFTASKMAKVFFT-NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALH  221 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~~~v~~~-~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~  221 (514)
                      .+..+..+..++.|   +.++.+|. |+.|.+|.+++..+.         ++.+.|.++.+.|-+...++.++|.. .|-
T Consensus       205 G~I~eAq~~aA~~f---gA~~t~FlvNGST~gn~a~i~a~~---------~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl  272 (755)
T PRK15029        205 GAFGESEKYAARVF---GADRSWSVVVGTSGSNRTIMQACM---------TDNDVVVVDRNCHKSIEQGLILTGAKPVYM  272 (755)
T ss_pred             cHHHHHHHHHHHHh---CCCcEEEEeCChhHHHHHHHHHhc---------CCCCEEEeecccHHHHHHHHHHcCCeEEEe
Confidence            34455566666666   44567665 555555555554442         23345667788888888888877753 322


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCC-ChhHHHHHHHHHHHHHHHHhCCCc--------EEEEEEccccCCCCcccCChh
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGE-TEEEYSTRLANNLEDLILKEGPET--------IAAFIAEPVIGAGGVIPPPAT  292 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~li~~~~~~~--------~aavivEpv~~~~G~~~p~~~  292 (514)
                      .+      ...        ++...+. +...+   ..+.+++.+.+. ++.        .++|++.|.+-  |+...   
T Consensus       273 ~P------~~~--------~~Gi~~~i~~~~~---~~e~i~~~l~~~-p~~k~~~~~~~~avvlt~PTY~--Gv~~d---  329 (755)
T PRK15029        273 VP------SRN--------RYGIIGPIYPQEM---QPETLQKKISES-PLTKDKAGQKPSYCVVTNCTYD--GVCYN---  329 (755)
T ss_pred             cc------ccc--------ccCCccCCCcccc---CHHHHHHHHHhC-chhhhccccCceEEEEECCCCc--ceeeC---
Confidence            11      000        0011110 00011   135666666542 222        26777777653  55554   


Q ss_pred             HHHHHHHHHHhcCCEEEEechhcCccccccccee-ccc-----C-CCCc-hhchh--hhhcCCcccc-eeEEeCHH---H
Q 010250          293 YFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKY-----S-IKPD-LVSFA--KALSSAYMPI-GAILVSPE---V  358 (514)
Q Consensus       293 ~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~-~~~-----g-v~pD-iv~~s--K~l~gG~~pi-g~v~~~~~---i  358 (514)
                       +++|.++|+++|+.|++||++.+.-+.+..+.. ...     . ..+| +++-|  |-|++  +.- +.+-.+..   +
T Consensus       330 -i~~I~~~~h~~~~~llvDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~a--lTQaS~LHv~~~~~~i  406 (755)
T PRK15029        330 -AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA--LSQASYIHVREGRGAI  406 (755)
T ss_pred             -HHHHHHHHHhcCCeEEEECccccccccCccccccccccccccccCCCceEEEEchhhcccc--hhhhhhheeCCCcccc
Confidence             899999999999999999999755444443321 111     1 3477 66545  76654  222 23333221   1


Q ss_pred             -HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhc
Q 010250          359 -SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAF  418 (514)
Q Consensus       359 -~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l  418 (514)
                       .+.+..      .+..-.|.+.+-+-+|..-.+...++.   +.+.++..+....+++.++++
T Consensus       407 d~~r~~~------~l~~~qSTSPSY~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~  464 (755)
T PRK15029        407 NFSRFNQ------AYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARL  464 (755)
T ss_pred             CHHHHHH------HHHHHcCCCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence             122321      112223555665555555555555553   246777777888888888765

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=98.85  E-value=1.3e-07  Score=96.86  Aligned_cols=245  Identities=20%  Similarity=0.196  Sum_probs=134.7

Q ss_pred             chHHHHHHHHHHhcCcCC------CCeEEEeCChhHHHHHHHHHHHHHHhh----cCCC-CccEEEEEecCCcccceeee
Q 010250          144 KPSLDLAKELLEMFTASK------MAKVFFTNSGSEANDTQVKLVWYYNNA----LGRP-NKKKFIARQKSYHGSTLIAA  212 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~------~~~v~~~~sGseA~~~Alk~a~~~~~~----~~~~-~~~~ii~~~~~yHG~t~~~~  212 (514)
                      ....++.+.++++++...      ...-+|+++|||||..|+.+||.....    .+.. ..+.+|+.+..-|-+...+.
T Consensus        79 ~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa  158 (373)
T PF00282_consen   79 EIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAA  158 (373)
T ss_dssp             HHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHH
T ss_pred             cchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhc
Confidence            334455566666664320      135789999999999999999754321    1111 23456677776676655554


Q ss_pred             ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC-C-cEEEEEEccccCCCCcccCC
Q 010250          213 SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP-E-TIAAFIAEPVIGAGGVIPPP  290 (514)
Q Consensus       213 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~-~-~~aavivEpv~~~~G~~~p~  290 (514)
                      ..-|..            +..+++...++             .+.++|++.+.+... . .+.+|+..--....|.+-| 
T Consensus       159 ~~lGlg------------~~~I~~~~~~~-------------md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~-  212 (373)
T PF00282_consen  159 RILGLG------------VRKIPTDEDGR-------------MDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP-  212 (373)
T ss_dssp             HHTTSE------------EEEE-BBTTSS-------------B-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S-
T ss_pred             ceeeeE------------EEEecCCcchh-------------hhHHHhhhhhcccccccccceeeeccCCCcccccccC-
Confidence            444432            22233322222             125788887765322 2 3434555444555687866 


Q ss_pred             hhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC-Cchhch--hhhhcCCcccceeEEeCHH-H-HHHhhhc
Q 010250          291 ATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK-PDLVSF--AKALSSAYMPIGAILVSPE-V-SEVIHSQ  365 (514)
Q Consensus       291 ~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~-pDiv~~--sK~l~gG~~pig~v~~~~~-i-~~~l~~~  365 (514)
                         +++|.++|++|++++++|-++.|....-+..-.-..++. .|-+++  -|.+.-. ++.|+++.+++ . .+.+...
T Consensus       213 ---l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P-~~~~~~l~r~~~~l~~~~~~~  288 (373)
T PF00282_consen  213 ---LEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERADSITIDPHKWLGVP-YGCGVLLVRDKSDLRDAFSIN  288 (373)
T ss_dssp             ---HHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-S-SS-EEEEESSGGGHHGGGEEE
T ss_pred             ---HHHHhhhccccceeeeecccccccccccccccccccccccccccccchhhhhcCC-ccceeEEeecccchHHHhccC
Confidence               999999999999999999999874222111111223432 455554  4888777 68899988764 3 3333221


Q ss_pred             cCCCCcc---------cccCCCCCc-HHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHhhhhhc
Q 010250          366 SNTLGSF---------SHGFTYSGH-PVSCAVAIEALKIYKERNI---VEQVNKIAPKFQDGVKAF  418 (514)
Q Consensus       366 ~~~~~~~---------~~~~t~~~~-pl~~aaa~aal~~~~~~~~---~~~~~~~~~~l~~~L~~l  418 (514)
                      ..+....         ....|..++ .........+|+.+..+++   .++.-++.++|.+.|++.
T Consensus       289 ~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~  354 (373)
T PF00282_consen  289 ADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKD  354 (373)
T ss_dssp             ETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             hhhhcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            1111100         011223322 3444555666776655544   556666778888888765

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=98.84  E-value=1.8e-07  Score=95.05  Aligned_cols=207  Identities=19%  Similarity=0.176  Sum_probs=116.0

Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCc
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPD  334 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pD  334 (514)
                      |.+.++++..+..|   ..||+.+..-.   ...+   +++++++|++.|++|++|-.|. |+--.| .+ ...+.. .|
T Consensus       157 D~d~l~~~a~~~kP---klIi~G~S~y~---~~~d---~~~~reIad~vga~l~~D~sH~~GLIa~g-~~-~~P~~~-AD  224 (399)
T PF00464_consen  157 DYDELEKLAKEHKP---KLIICGASSYP---RPID---FKRFREIADEVGAYLMADISHIAGLIAGG-LF-PNPFPY-AD  224 (399)
T ss_dssp             -HHHHHHHHHHH-----SEEEEE-SSTS---S------HHHHHHHHHHTT-EEEEE-TTTHHHHHTT-SS---GCCT-SS
T ss_pred             CHHHHHHHHhhcCC---CEEEECchhcc---CccC---HHHHHHHHHhcCcEEEecccccccceehh-ee-cCcccc-ce
Confidence            46888888877654   46777654321   2222   7999999999999999999987 442222 22 123332 69


Q ss_pred             hhchh--hhhcCCcccceeEEeC--------------HHHHHHhhhccCCCCcccccCCCCCc-HHHHHHHHHHHHHHhh
Q 010250          335 LVSFA--KALSSAYMPIGAILVS--------------PEVSEVIHSQSNTLGSFSHGFTYSGH-PVSCAVAIEALKIYKE  397 (514)
Q Consensus       335 iv~~s--K~l~gG~~pig~v~~~--------------~~i~~~l~~~~~~~~~~~~~~t~~~~-pl~~aaa~aal~~~~~  397 (514)
                      ++|.+  |.|.|  -+-|.++++              +++.+.+...      ... +..+++ .-..++-..++....+
T Consensus       225 vvt~sThKtl~G--PrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~a------vfP-~~qg~~h~~~iaalAval~ea~~  295 (399)
T PF00464_consen  225 VVTGSTHKTLRG--PRGGIILTNKGSKNVDKKGKEIDEELAEKIDSA------VFP-GLQGGPHMHRIAALAVALKEALS  295 (399)
T ss_dssp             EEEEESSGGG-S--SS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHH------HTT-TT-SS--HHHHHHHHHHHHHHTS
T ss_pred             EEEeeccccccc--cCceEEEEcCCccccCCcccccHHHHHHHhccc------cCC-CcccCcchhHHHHHHHHHhcccC
Confidence            99766  99998  466788888              7888888752      111 122222 2222322234444332


Q ss_pred             ---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--
Q 010250          398 ---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--  472 (514)
Q Consensus       398 ---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--  472 (514)
                         .+..+++.++.+.|.+.|.+. .+.++... -...++.+++.....          -+....+.|.+.||.+...  
T Consensus       296 ~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~~gg-Td~H~vlvd~~~~~~----------~g~~a~~~Le~~gI~vnkn~i  363 (399)
T PF00464_consen  296 PEFKEYAKQVVKNAKALAEALQER-GFKVVTGG-TDNHQVLVDLRSFGI----------DGKEAEKALEEAGIIVNKNTI  363 (399)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS--SSSEEEEEGGGGTS-----------HHHHHHHHHHTTEE-EEE--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhC-CcEEEECC-CCCCeEEEEeccccc----------chHHHHHHHHhcCeeeccccc
Confidence               356778888999999999875 33333211 123345566543211          1455667888999998632  


Q ss_pred             --------CCEEEEeCC----CCCCHHHHHHHHHH
Q 010250          473 --------GDNIMMSPP----FIMSPEEVDELISK  495 (514)
Q Consensus       473 --------g~~iRi~p~----~~~t~e~id~~~~~  495 (514)
                              .+.|||.-+    ....++|+.++.+.
T Consensus       364 P~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~  398 (399)
T PF00464_consen  364 PGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAEL  398 (399)
T ss_dssp             TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHH
T ss_pred             CCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhh
Confidence                    246999855    23456666665544

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=98.77  E-value=1.1e-07  Score=97.18  Aligned_cols=230  Identities=17%  Similarity=0.220  Sum_probs=130.8

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeC-ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-c
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTN-SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-A  219 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~-sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~  219 (514)
                      +.....+..+..++.|   +.++.+|.. +.|.+|.+++..+.         ++.+.|.++.+-|-+...++.++|.. .
T Consensus        64 p~G~I~eAe~~aA~~f---GAd~t~flvnGsT~g~~a~i~a~~---------~~gd~VLv~RN~HkSv~~alil~ga~Pv  131 (417)
T PF01276_consen   64 PEGIIKEAEELAARAF---GADKTFFLVNGSTSGNQAMIMALC---------RPGDKVLVDRNCHKSVYNALILSGAIPV  131 (417)
T ss_dssp             TBTHHHHHHHHHHHHH---TESEEEEESSHHHHHHHHHHHHHT---------TTTCEEEEETT--HHHHHHHHHHTEEEE
T ss_pred             CccHHHHHHHHHHHhc---CCCeEEEEecCchHHHHHHHHHhc---------CCCCEEEEcCCcHHHHHHHHHHcCCeEE
Confidence            5566778888888888   456777755 45555666665553         23345666778888877777777642 2


Q ss_pred             cc----CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEE---EEEEccccCCCCcccCChh
Q 010250          220 LH----QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIA---AFIAEPVIGAGGVIPPPAT  292 (514)
Q Consensus       220 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~a---avivEpv~~~~G~~~p~~~  292 (514)
                      |-    ..++...+                 .+.+++.   .+.+++.+.+. ++..+   +||+.|.+-  |+...   
T Consensus       132 yi~p~~~~~gi~~~-----------------i~~~~~~---~~~i~~~l~~~-p~~k~~~~vvlt~PTY~--Gv~~d---  185 (417)
T PF01276_consen  132 YIPPEDNEYGIIGG-----------------ISPDEFN---EEDIEEALKEH-PDAKAPRLVVLTSPTYY--GVCYD---  185 (417)
T ss_dssp             EEEEEE-TTS-BEE-----------------B-GGGGS---HHHHHHHHHHC-TTCHCESEEEEESS-TT--SEEE----
T ss_pred             EecCCccccCCccC-----------------CChhhhh---HHHHHHHHHhC-ccccCceEEEEeCCCCC--eEEEC---
Confidence            22    11221111                 0011111   26777777654 34444   777777653  66666   


Q ss_pred             HHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCc-------hhchh--hhhcCCcccceeEEeCHH--H-HH
Q 010250          293 YFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD-------LVSFA--KALSSAYMPIGAILVSPE--V-SE  360 (514)
Q Consensus       293 ~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pD-------iv~~s--K~l~gG~~pig~v~~~~~--i-~~  360 (514)
                       +++|.++|+++++.|++||++.+.-... .+.........|       +++-|  |.+++= -..+.+-.+.+  + .+
T Consensus       186 -i~~I~~~~h~~~~~llvDEAhGah~~F~-~lp~~a~~~gad~~~~~~~~vvqS~HKtL~al-tQts~lh~~~~~~v~~~  262 (417)
T PF01276_consen  186 -IKEIAEICHKHGIPLLVDEAHGAHFGFH-PLPRSALALGADRPNDPGIIVVQSTHKTLPAL-TQTSMLHVKGDRIVDHE  262 (417)
T ss_dssp             -HHHHHHHHCCTECEEEEE-TT-TTGGCS-GGGTTCSSTTSS-CTSBEEEEEEEHHHHSSS--TT-EEEEEETCCCTTHH
T ss_pred             -HHHHHHHhcccCCEEEEEccccccccCC-CCccchhhccCccccccceeeeechhhccccc-ccceEEEecCCCcccHH
Confidence             9999999999999999999987543322 222234445566       77655  877652 33455555433  2 23


Q ss_pred             HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH-hh--ccHHHHHHHHHHHHHhhhhhc
Q 010250          361 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY-KE--RNIVEQVNKIAPKFQDGVKAF  418 (514)
Q Consensus       361 ~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~-~~--~~~~~~~~~~~~~l~~~L~~l  418 (514)
                      .+..      .+..-.|.+.+-+-++..-.+.+.+ .+  +.+.++..++.+.+|+.|+++
T Consensus       263 ~~~~------~l~~~~TTSPSY~lmASlD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~  317 (417)
T PF01276_consen  263 RVNE------ALSMHQTTSPSYPLMASLDVARAQMEEEEGRELLEEAIELAEEFRKKINRL  317 (417)
T ss_dssp             HHHH------HHHHHS-SS--HHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHH------HHHHHcCCChHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence            3332      1222246666666666666666666 33  357888888899999999543

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=98.75  E-value=6.7e-06  Score=81.27  Aligned_cols=305  Identities=14%  Similarity=0.150  Sum_probs=151.8

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH-HHHHHHHHHhhcCC-----CCccEEEEEecCCcccceeeeecCC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT-QVKLVWYYNNALGR-----PNKKKFIARQKSYHGSTLIAASLSG  216 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~-Alk~a~~~~~~~~~-----~~~~~ii~~~~~yHG~t~~~~~~s~  216 (514)
                      .+...|+.+..++++ +...++++...+.|-.++. ++..++.+....+.     .++-|+|...++|-.+-...     
T Consensus        68 l~Gipe~r~l~a~ll-gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~-----  141 (425)
T PF12897_consen   68 LDGIPEARELFAELL-GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAIT-----  141 (425)
T ss_dssp             SS--HHHHHHHHHHH-TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHH-----
T ss_pred             cCChHHHHHHHHHHh-CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHH-----
Confidence            344556666666666 3456777776655544443 33334333222221     24678999999995432111     


Q ss_pred             CccccCCCCCCCCcccccCC-CCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHH
Q 010250          217 LPALHQKFDLPAPFVLHTDC-PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFE  295 (514)
Q Consensus       217 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~  295 (514)
                           +.|++-   ...++. ++.               -|++.+|+++.+  ...+.++++-|.+++-.-+..+++-.+
T Consensus       142 -----E~~Gie---mi~VpM~~dG---------------PDmD~Ve~LV~~--D~svKGiWcVP~ySNPtG~tySde~vr  196 (425)
T PF12897_consen  142 -----EHFGIE---MIPVPMTEDG---------------PDMDMVEELVAE--DPSVKGIWCVPKYSNPTGITYSDEVVR  196 (425)
T ss_dssp             -----HHCT-E---EEEEEEETTE---------------E-HHHHHHHTHT--STTEEEEEE-SSS-TTT-----HHHHH
T ss_pred             -----HhhCcE---EEecCCCCCC---------------CCHHHHHHHHhc--CCccceEEeCCCccCCCCccCCHHHHH
Confidence                 111110   000000 000               026888888754  357999999998765433566888888


Q ss_pred             HHHHH-HHhcCCEEEEechhcCcccc-ccc--ce-------ecccCCCCchh----chhh-hhcCCcccceeEEeCHHHH
Q 010250          296 KVQAV-VKKYDILFIADEVICAFGRL-GTM--FG-------CDKYSIKPDLV----SFAK-ALSSAYMPIGAILVSPEVS  359 (514)
Q Consensus       296 ~l~~l-~~~~gillI~DEv~tG~gr~-G~~--~~-------~~~~gv~pDiv----~~sK-~l~gG~~pig~v~~~~~i~  359 (514)
                      ++..+ +...+..++-|.+|+ +-.. +..  -.       +...| .||.+    +.|| .+.|  ..++++.++++-+
T Consensus       197 rlA~m~~AA~DFRI~WDNAY~-vHhL~~~~~~~~~~nil~~~~~AG-npdrv~~F~STSKITf~G--aGva~~aaS~~Nl  272 (425)
T PF12897_consen  197 RLAAMKTAAPDFRIFWDNAYA-VHHLYDEEPRDALLNILDACAKAG-NPDRVYVFASTSKITFPG--AGVAFFAASEANL  272 (425)
T ss_dssp             HHHHS--SSTT-EEEEE-TTT-T-BSSSSSS------HHHHHHHTT--TTSEEEEEESTTTS-TT--SS-EEEEE-HHHH
T ss_pred             HHhcCCcCCcCeEEEeecCce-EeeccccccchhhhHHHHHHHHcC-CCCeEEEEecccccccCC--cceeeeecCHHHH
Confidence            88888 346799999999987 3111 110  00       01111 36644    4678 5666  4689999999888


Q ss_pred             HHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhh----hh----cc-CCCceeEEEee
Q 010250          360 EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV----KA----FS-DSPIIGEIRGT  430 (514)
Q Consensus       360 ~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L----~~----l~-~~~~~~~v~g~  430 (514)
                      +.+...       ....|.+.+-+.+..-..-++-.+ .++.+++++.++.++-+.    +.    |. ...+.......
T Consensus       273 ~~~~~~-------~~~~tIgpdKvNQLRHvrff~d~~-gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~  344 (425)
T PF12897_consen  273 AWIKKH-------LSVQTIGPDKVNQLRHVRFFKDAE-GGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPK  344 (425)
T ss_dssp             HHHHHH-------HHHH-S---HHHHHHHHHHHHSHH-THHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---S
T ss_pred             HHHHHH-------hcCceeCccHHHHHHHHHHhcChh-hHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCC
Confidence            887642       223455666565554443333211 145555555444443222    21    22 23455555555


Q ss_pred             -eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-----------CEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250          431 -GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----------DNIMMSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       431 -g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-----------~~iRi~p~~~~t~e~id~~~~~l~~  498 (514)
                       |.|++++..+..            ++++.+.+.+.||..++.|           ..||++|. .-+.||++.+++.+.-
T Consensus       345 GGYFIsld~~~G~------------AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS-~P~leel~~Am~~~~~  411 (425)
T PF12897_consen  345 GGYFISLDVLDGT------------AKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPS-YPSLEELETAMDVFAT  411 (425)
T ss_dssp             BSS-EEEEESTT-------------HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--S-SS-HHHHHHHHHHHHH
T ss_pred             CceEEEEecCCCh------------HHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCC-CCCHHHHHHHHHHHHH
Confidence             456778776532            6789999999999999754           46999996 4688999999999987


Q ss_pred             HHHHH
Q 010250          499 ALKAT  503 (514)
Q Consensus       499 ~l~~~  503 (514)
                      +++-.
T Consensus       412 cv~la  416 (425)
T PF12897_consen  412 CVKLA  416 (425)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            76543

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=98.72  E-value=9.4e-06  Score=78.95  Aligned_cols=320  Identities=17%  Similarity=0.221  Sum_probs=167.2

Q ss_pred             chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250          144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK  223 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~  223 (514)
                      .....|++...+.|   +++.++.+.-|--|-..-+..+..   +....+..+++.+++.|.-.|-+.....|... +. 
T Consensus        79 rs~~~L~~avkdif---Gfq~~iPthQGRgAE~Il~~i~ik---~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~-~n-  150 (471)
T COG3033          79 RSYYALADAVKDIF---GFQYTIPTHQGRGAENILIPILIK---KGEQEPGSKMVAFSNYHFDTTRGHIQINGATP-RN-  150 (471)
T ss_pred             ccHHHHHHHHHHhc---CceeeeeccCCccHHHHHHHHHhh---hccccCCccccccccceecchhHHHHhcCCcc-cc-
Confidence            34467888888888   577888888766555544444432   11112235677777655544433332222111 00 


Q ss_pred             CCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 010250          224 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK  303 (514)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~  303 (514)
                      .-.+..+-..+..|  |++           ..+++.|+++|.+.+++++..|++--.++..|-.+-+-.-+++++++|++
T Consensus       151 ~~~~ea~d~~~~~p--FKG-----------d~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~k  217 (471)
T COG3033         151 VYVDEAFDTEVKYP--FKG-----------NFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKK  217 (471)
T ss_pred             ccccccccccccCC--CCC-----------ccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHH
Confidence            00011111111111  222           23478999999998888887666655455555566677889999999999


Q ss_pred             cCCEEEEechhcCcccccccceec-ccCCC--------------Cchhchh-hhhcCCcccceeEEe-CHH----HHHHh
Q 010250          304 YDILFIADEVICAFGRLGTMFGCD-KYSIK--------------PDLVSFA-KALSSAYMPIGAILV-SPE----VSEVI  362 (514)
Q Consensus       304 ~gillI~DEv~tG~gr~G~~~~~~-~~gv~--------------pDiv~~s-K~l~gG~~pig~v~~-~~~----i~~~l  362 (514)
                      ||+.++.|-.-.  .-. ..|..+ ..|-+              .|-.++| |.  -|..++|.+++ +++    +...+
T Consensus       218 y~ipvv~Da~Rf--aEN-aYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KK--D~lvnmGGfl~~~D~~~fDvy~~~  292 (471)
T COG3033         218 YDIPVVMDAARF--AEN-AYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKK--DGLVNMGGFLCFKDDSFFDVYEEC  292 (471)
T ss_pred             cCCcEEeehhhh--hhh-hhhhhhcCcccccccHHHHHHHHHhhhhhheeeccc--cceeccccEEEecCccHHHHHHHH
Confidence            999999997632  011 011111 11111              2223333 31  13355665554 554    33333


Q ss_pred             hhccCCCCcccccCCCCC----cHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEE-
Q 010250          363 HSQSNTLGSFSHGFTYSG----HPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTE-  437 (514)
Q Consensus       363 ~~~~~~~~~~~~~~t~~~----~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~-  437 (514)
                      ...   .-......||++    ...++|++   |...-+.++.++--.-.++|.++|.+. ..|++..+-|.+.++-.. 
T Consensus       293 ~~~---~V~~eG~~tYGgl~GrdmealAvG---L~e~~~~~yl~~Rv~Qv~YL~~~l~~~-GVpi~~paGGHavfvda~~  365 (471)
T COG3033         293 RTL---VVVQEGFPTYGGLAGRDMEALAVG---LREGVNFDYLAHRVAQVQYLADGLEEA-GVPIVQPAGGHAVFVDAGK  365 (471)
T ss_pred             Hhh---eEeeccccccCcccchhHHHHHHH---HHHhcCcHHHHHHHHHHHHHHHHHHhc-CCeeEecCCCceEEeehhh
Confidence            221   011111234433    33334433   332223455554445567888888876 556666665555443321 


Q ss_pred             EccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEee------------------CCEEEEeCCC-CCCHHHHHHHHHHHH
Q 010250          438 FADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVS------------------GDNIMMSPPF-IMSPEEVDELISKYG  497 (514)
Q Consensus       438 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~------------------g~~iRi~p~~-~~t~e~id~~~~~l~  497 (514)
                      +-+ ..+.+.|+     ++.++-+| ++-||-+...                  -+.+|++.|- +-|.+.+|..++.++
T Consensus       366 ~lp-hip~eqFp-----aqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~  439 (471)
T COG3033         366 FLP-HIPAEQFP-----AQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFK  439 (471)
T ss_pred             hcC-CCChhhCc-----HHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHH
Confidence            111 22222232     33344343 4456554411                  1458999885 458999999999888


Q ss_pred             HHHHH
Q 010250          498 KALKA  502 (514)
Q Consensus       498 ~~l~~  502 (514)
                      +..+.
T Consensus       440 ~l~e~  444 (471)
T COG3033         440 ALKEN  444 (471)
T ss_pred             HHHhc
Confidence            77653

>PRK13578 ornithine decarboxylase; Provisional

Probab=98.69  E-value=3.3e-06  Score=91.71  Aligned_cols=314  Identities=13%  Similarity=0.105  Sum_probs=159.0

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEe-CChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee-eecCCC-c
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFT-NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA-ASLSGL-P  218 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~-~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~-~~~s~~-~  218 (514)
                      +..+..+..+..++.|   +.++.+|. |+-|.+|.+++..+.         ++.+.|.++.+.|-+...+ +.++|. |
T Consensus       172 ~eG~i~eAq~~AA~~f---gAd~tyFlvNGTS~gn~a~i~a~~---------~~Gd~VLvdRN~HKSv~hgaLiLsGa~P  239 (720)
T PRK13578        172 HEGAAKDAQKHAAKVF---NADKTYFVLNGTSASNKVVTNALL---------TPGDLVLFDRNNHKSNHHGALIQAGATP  239 (720)
T ss_pred             CChHHHHHHHHHHHHh---CCCceEEEeCChhHHHHHHHHHhc---------CCCCEEEeecccHHHHHHHHHHHcCCeE
Confidence            3445566677777777   44567664 555555555555442         2345666788888887654 666664 4


Q ss_pred             cccCC----CCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCC-------cEEEEEEccccCCCCcc
Q 010250          219 ALHQK----FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPE-------TIAAFIAEPVIGAGGVI  287 (514)
Q Consensus       219 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~-------~~aavivEpv~~~~G~~  287 (514)
                      .|-.+    ++...                 +.+.+.|.   .+.+++.+.+..++       -.++||..|.+  .|++
T Consensus       240 VYl~P~~n~~Gi~g-----------------~I~~~~~~---~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY--dG~~  297 (720)
T PRK13578        240 VYLETARNPFGFIG-----------------GIDAHCFD---EEYLREQIREVAPERADEARPFRLAVIQLGTY--DGTI  297 (720)
T ss_pred             EEeeccccccCCcC-----------------CCChHHcc---HHHHHHHHHhcCccccccccCceEEEEECCCC--ccee
Confidence            33211    11110                 11112221   25567766654222       25567776654  2555


Q ss_pred             cCChhHHHHHHHH-HHhcCCEEEEechhcCccccccc---ceecccCCCCc----hhchh--hhhcCCcccceeEEeCHH
Q 010250          288 PPPATYFEKVQAV-VKKYDILFIADEVICAFGRLGTM---FGCDKYSIKPD----LVSFA--KALSSAYMPIGAILVSPE  357 (514)
Q Consensus       288 ~p~~~~L~~l~~l-~~~~gillI~DEv~tG~gr~G~~---~~~~~~gv~pD----iv~~s--K~l~gG~~pig~v~~~~~  357 (514)
                      ..    +++|.++ |+.++ .|++||++.+.-+....   +.-......+|    ++|=|  |-|++ +-..|.+-.+..
T Consensus       298 yd----i~~I~~~~~h~~~-~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~a-lTQaS~LHvk~~  371 (720)
T PRK13578        298 YN----ARQVVDKIGHLCD-YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAG-FSQTSQIHKKDN  371 (720)
T ss_pred             ec----HHHHHHHhhccCC-cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchh-hhhHhhhhcCCc
Confidence            55    8999998 78888 99999998755333332   11111233466    66545  76654 112233333221


Q ss_pred             HH---------HHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhh-hhccCCCce
Q 010250          358 VS---------EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGV-KAFSDSPII  424 (514)
Q Consensus       358 i~---------~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L-~~l~~~~~~  424 (514)
                      .+         +.+..      .+..-.|.+.+-+-+|..-.+-..++.   +.+.++..+.+..+|+.| +.+......
T Consensus       372 ~i~g~~~~v~~~r~~~------al~m~qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~  445 (720)
T PRK13578        372 HIKGQARYCPHKRLNN------AFMLHASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPF  445 (720)
T ss_pred             ccccccccCCHHHHHH------HHHHHcCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeec
Confidence            11         22221      111112444443333333333344432   346777777888888877 443221111


Q ss_pred             e--EEE----------------------------eeee------e-----EEEEEccCCCCCCCCCCccchHHHHHHHHH
Q 010250          425 G--EIR----------------------------GTGL------I-----LGTEFADNKSPNEPFPPEWGIGAYFGAQCE  463 (514)
Q Consensus       425 ~--~v~----------------------------g~g~------~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~  463 (514)
                      .  .+.                            |...      +     +.+....-......+....-.+..+.+.|.
T Consensus       446 ~p~~v~~~~~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~  525 (720)
T PRK13578        446 IPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLR  525 (720)
T ss_pred             ccccccccccccCchhhhcccccccccccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHH
Confidence            0  000                            0000      0     001000000000000000011466788888


Q ss_pred             HCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          464 KHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       464 ~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      ++||.+-..+ ..+-+-.+...|+++++.+++.|.+.-+
T Consensus       526 e~gI~~E~~d~~~vL~l~s~g~t~~~~~~Lv~aL~~f~~  564 (720)
T PRK13578        526 ENGIVPEKCDLNSILFLLTPAEDMAKLQQLVAMLARFEK  564 (720)
T ss_pred             HcCCEEEecCCCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence            8899987665 4555555568999999999998886643

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=98.66  E-value=2.8e-06  Score=83.69  Aligned_cols=295  Identities=16%  Similarity=0.201  Sum_probs=160.0

Q ss_pred             hHHHHHHHHHHhcCcCC-----CCeE--EEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC
Q 010250          145 PSLDLAKELLEMFTASK-----MAKV--FFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL  217 (514)
Q Consensus       145 ~~~ela~~L~~~~~~~~-----~~~v--~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~  217 (514)
                      ...++.+.+.+++-+.+     .+++  +=+.|||-|.-.+.+....+      .++..|-+.+++|..+.-..... |.
T Consensus        70 G~~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~------~~~~~vwis~PtW~NH~~If~~a-Gl  142 (396)
T COG1448          70 GLPEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARF------FPDATVWISDPTWPNHKAIFEAA-GL  142 (396)
T ss_pred             CcHHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHh------CCCceEEeCCCCcHhHHHHHHhc-CC
Confidence            33455555555442211     1233  44789998888888766433      34556778788875442111111 11


Q ss_pred             ccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHH
Q 010250          218 PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKV  297 (514)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l  297 (514)
                      ..              ..+|.+ .  ..+ ..     .+.+.+-..+.+.. +....++-.+..+++| +-|+.+-+++|
T Consensus       143 ~v--------------~~Y~Yy-d--~~~-~~-----~df~~mla~L~~a~-~~~vvLLH~CcHNPTG-~D~t~~qW~~l  197 (396)
T COG1448         143 EV--------------ETYPYY-D--AET-KG-----LDFDGMLADLKTAP-EGSVVLLHGCCHNPTG-IDPTEEQWQEL  197 (396)
T ss_pred             ce--------------eeeecc-c--ccc-cc-----ccHHHHHHHHHhCC-CCCEEEEecCCCCCCC-CCCCHHHHHHH
Confidence            10              011111 0  000 00     11233333343333 3334555556677777 45677889999


Q ss_pred             HHHHHhcCCEEEEechhcCcccccccceecccCC------CCch-h--chhhhhcCCcccceeEEe---CHHHHHHhhhc
Q 010250          298 QAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI------KPDL-V--SFAKALSSAYMPIGAILV---SPEVSEVIHSQ  365 (514)
Q Consensus       298 ~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv------~pDi-v--~~sK~l~gG~~pig~v~~---~~~i~~~l~~~  365 (514)
                      .++.++.|.+-++|=+|-||+.-.   --+.+++      .+.+ |  +|||.|+-=+-++|++..   +++..+.+.++
T Consensus       198 ~~~~~~r~lip~~D~AYQGF~~Gl---eeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sq  274 (396)
T COG1448         198 ADLIKERGLIPFFDIAYQGFADGL---EEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQ  274 (396)
T ss_pred             HHHHHHcCCeeeeehhhhhhccch---HHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHH
Confidence            999999999999999999996432   2222222      2333 3  578977751167776433   45555554431


Q ss_pred             cCCCCcccccCCCCCcHH-HHHHHHHHHH--HHh-----h-ccHHHHHHHHHHHHHhhhhhc-cC--CCceeEEEeeeee
Q 010250          366 SNTLGSFSHGFTYSGHPV-SCAVAIEALK--IYK-----E-RNIVEQVNKIAPKFQDGVKAF-SD--SPIIGEIRGTGLI  433 (514)
Q Consensus       366 ~~~~~~~~~~~t~~~~pl-~~aaa~aal~--~~~-----~-~~~~~~~~~~~~~l~~~L~~l-~~--~~~~~~v~g~g~~  433 (514)
                      -    ....-.+|+.+|- +++.....|+  .++     | +++.+++.+++..|.+.|++. ..  ...+.  ...|++
T Consensus       275 l----k~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~--~Q~GMF  348 (396)
T COG1448         275 L----KAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFII--SQRGMF  348 (396)
T ss_pred             H----HHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchHh--hcCcee
Confidence            0    1123346655543 2222222221  111     1 356788889999999999875 22  23332  223332


Q ss_pred             EEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250          434 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       434 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~  499 (514)
                      ...-|.               .+++.....+.||+....|   ||+. ..+++..|+.+.+.|.++
T Consensus       349 sy~Gls---------------~~QV~rLree~~IY~v~sG---Ri~v-aGl~~~ni~~va~ai~~v  395 (396)
T COG1448         349 SYTGLS---------------PEQVDRLREEFGIYLVASG---RINV-AGLNTSNIDYVAKAIAAV  395 (396)
T ss_pred             ecCCCC---------------HHHHHHHHHhccEEEecCC---eeee-ccCChhhHHHHHHHHHhh
Confidence            222111               2334444456799987666   6654 278999999999988765

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=98.64  E-value=1.7e-06  Score=89.46  Aligned_cols=316  Identities=13%  Similarity=0.158  Sum_probs=191.0

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL  220 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~  220 (514)
                      +.....+|++.|++..   +.|.+.| -|||...-.+-++..|.|...+|..-| .|....-+-||....+....|-.. 
T Consensus       580 Y~~lf~~Le~~Lc~iT---G~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hR-nvClIPvSAHGTNPASA~Magmkv-  654 (1001)
T KOG2040|consen  580 YQQLFTELEKDLCEIT---GFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHR-NVCLIPVSAHGTNPASAAMAGMKV-  654 (1001)
T ss_pred             HHHHHHHHHHHhheee---cccceeecCCCCcccchhhHHHHHHHHHhccCCcc-eeEEEeecccCCChhhHHhcCCEE-
Confidence            3455667888888875   6777877 679999999999999999988885544 455566788998655555444322 


Q ss_pred             cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250          221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV  300 (514)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l  300 (514)
                                 ..+.|..             .+..++.+|.+.-.+. .++.|++++. -+++-|+..+.   ++++.++
T Consensus       655 -----------vpV~~~~-------------~G~id~~dLk~kaekh-~~~Laa~MvT-YPST~GvfE~~---i~d~cd~  705 (1001)
T KOG2040|consen  655 -----------VPVGCDA-------------NGNIDMVDLKAKAEKH-KDNLAALMVT-YPSTHGVFEEG---IDDICDI  705 (1001)
T ss_pred             -----------EEeeccC-------------CCCccHHHHHHHHHHh-hhhhheeEEe-ccccccccccc---HHHHHHH
Confidence                       1122211             1223356776665443 4678887774 34566888776   8999999


Q ss_pred             HHhcCCEEEEech----hcCcccccccce-ecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCC-C----C
Q 010250          301 VKKYDILFIADEV----ICAFGRLGTMFG-CDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT-L----G  370 (514)
Q Consensus       301 ~~~~gillI~DEv----~tG~gr~G~~~~-~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~-~----~  370 (514)
                      .++||--+..|-+    |-|+.|-|..++ +.|.++.-   ||+=.-|||+-.+|=+.+.+.+...+....-- .    +
T Consensus       706 iHehGGQVYlDGANMNAqVGlc~pGd~GaDV~HLNLHK---TFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~  782 (1001)
T KOG2040|consen  706 IHEHGGQVYLDGANMNAQVGLCRPGDIGADVCHLNLHK---TFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPED  782 (1001)
T ss_pred             HHhcCCEEEecCCCccceecccCCccccccceeecccc---eeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCC
Confidence            9999999999975    668888876543 34444421   44444556544555566777776655432110 0    0


Q ss_pred             c--c-cccCCCCCcHHHHHHHHHHHHHHhhccHHH---HHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEE----EEcc
Q 010250          371 S--F-SHGFTYSGHPVSCAVAIEALKIYKERNIVE---QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGT----EFAD  440 (514)
Q Consensus       371 ~--~-~~~~t~~~~pl~~aaa~aal~~~~~~~~~~---~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i----~~~~  440 (514)
                      .  + ..+..-.|+..-+....+-++.+...++.+   -.--+.+++.++|+.-  ++++  .++.-.+++-    ++.+
T Consensus       783 ~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil--~~~~~~~vaHEFIlD~r~  858 (1001)
T KOG2040|consen  783 TSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKIL--FRGENGLVAHEFILDLRP  858 (1001)
T ss_pred             CCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--ccee--EecCCcceeeeeeeechh
Confidence            0  0 001111233344445566677776655432   2334566777777642  2221  1111113332    2222


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHCCcEEE----eeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          441 NKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VSGDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       441 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      -+.+.      .--+..++++|++.|+..-    |..+.+.+-|.-.-+.+|+|++++++-..-+++.
T Consensus       859 fK~~a------gieavDvAKRL~DYgFHaPTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIreEI~  920 (1001)
T KOG2040|consen  859 FKKTA------GIEAVDVAKRLMDYGFHAPTMSWPVAGTLMIEPTESEDKAELDRFCDALISIREEIA  920 (1001)
T ss_pred             hcccc------CCcHHHHHHHHHhccCCCCccccccCCceEeccCccccHHHHHHHHHHHHHHHHHHH
Confidence            11110      0114568899999998754    3457899999888899999999998776655544

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=98.60  E-value=1.3e-05  Score=87.11  Aligned_cols=311  Identities=14%  Similarity=0.152  Sum_probs=162.7

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCCh-hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccc
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSG-SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PAL  220 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sG-seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~  220 (514)
                      ..+..+..+..++.|   +.++.+|..+| |.+|.+++..+.         ++.+.|.++.+.|-+...++.++|. |.|
T Consensus       194 ~G~i~eAe~~aA~~f---gAd~tyfvvNGTS~~n~av~~a~~---------~~Gd~VLvdRN~HKSv~~aLilsga~PVY  261 (713)
T PRK15399        194 TGPHLEAEEYIARTF---GAEQSYIVTNGTSTSNKIVGMYAA---------PAGSTLLIDRNCHKSLAHLLMMSDVVPIW  261 (713)
T ss_pred             ChHHHHHHHHHHHHh---CCCcEEEEeCChHHHHHHHHHHhc---------CCCCEEEeecccHHHHHHHHHHcCCeeEE
Confidence            344556666777777   45677775555 555666555442         3345666788888887777777764 333


Q ss_pred             cCCCCCCCCcccccCCCCcccCCCCC-CChhHHHHHHHHHHHHHHHHhCCCc---EEEEEEccccCCCCcccCChhHHHH
Q 010250          221 HQKFDLPAPFVLHTDCPHYWRYAHPG-ETEEEYSTRLANNLEDLILKEGPET---IAAFIAEPVIGAGGVIPPPATYFEK  296 (514)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~le~li~~~~~~~---~aavivEpv~~~~G~~~p~~~~L~~  296 (514)
                      -.+-.      .        ++...+ .+.+.|.   .+.+++.+.+. ++.   .++||..|.+  .|++..    ++.
T Consensus       262 l~P~~------n--------~~Gi~g~I~~~~~~---~e~I~~~i~~~-p~~~~p~~vvit~pTY--dGi~yd----~~~  317 (713)
T PRK15399        262 LKPTR------N--------ALGILGGIPRREFT---RDSIEEKVAAT-TQAQWPVHAVITNSTY--DGLLYN----TDW  317 (713)
T ss_pred             ecccc------c--------ccCCcCCCChhhcc---HHHHHHHHHhC-CCcCCceEEEEECCCC--CceeeC----HHH
Confidence            21110      0        011111 1111221   26677777653 222   4778887744  365554    788


Q ss_pred             HHHHHHhcCCEE-EEechhcCcccccccce-ecc--cCCCCchh---chh--hhhcCCcccceeEEeCHHHH-HHhhhcc
Q 010250          297 VQAVVKKYDILF-IADEVICAFGRLGTMFG-CDK--YSIKPDLV---SFA--KALSSAYMPIGAILVSPEVS-EVIHSQS  366 (514)
Q Consensus       297 l~~l~~~~gill-I~DEv~tG~gr~G~~~~-~~~--~gv~pDiv---~~s--K~l~gG~~pig~v~~~~~i~-~~l~~~~  366 (514)
                      |.++|   |+.+ ++||++.+.-+....+. ...  .+-.+|.+   |-|  |-+++ +-..|.+-.+..+- +.+..  
T Consensus       318 I~~~~---g~~~ilvDEAhgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~a-lTQaS~iHvk~~vd~~~~n~--  391 (713)
T PRK15399        318 IKQTL---DVPSIHFDSAWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAA-FSQASLIHIKGEYDEETFNE--  391 (713)
T ss_pred             HHHHh---CCCEEEEeccchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccc-cchheeeeecCCCCHHHHHH--
Confidence            88888   6766 59999876533333221 111  11146777   333  86665 12334444433221 22221  


Q ss_pred             CCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccC-C-CceeEEEe------------
Q 010250          367 NTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSD-S-PIIGEIRG------------  429 (514)
Q Consensus       367 ~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~-~-~~~~~v~g------------  429 (514)
                          .+..-.|.+.+-+-+|..-.+...++.   +.+.++..+.+..+|+.|.++.+ . +....+-+            
T Consensus       392 ----a~~m~~STSPsY~LmASLD~a~~~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l  467 (713)
T PRK15399        392 ----AFMMHTSTSPSYPIVASVETAAAMLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPV  467 (713)
T ss_pred             ----HHHHHcCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceec
Confidence                112223445554545554455555542   35778888888888888877522 0 00000000            


Q ss_pred             --------ee----------e-eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHH
Q 010250          430 --------TG----------L-ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEV  489 (514)
Q Consensus       430 --------~g----------~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~i  489 (514)
                              .+          . =+.+..+.-. ....+....-.+..+.+.|.++||.+-..+ +.+-+..+...|++++
T Consensus       468 ~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~-~~g~~~~~Gi~g~~l~~~L~e~gI~~E~~d~~~vL~l~s~g~t~~~~  546 (713)
T PRK15399        468 APGEQWHGFKDADADHMFLDPVKVTILTPGMD-EQGNMSEEGIPAALVAKFLDERGIVVEKTGPYNLLFLFSIGIDKTKA  546 (713)
T ss_pred             CCCcccccccccccccccCCCceEEEEecCcc-cccccccCCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCCCCHHHH
Confidence                    00          0 0001110000 000000111125667888999999988665 4555555578899999


Q ss_pred             HHHHHHHHHHH
Q 010250          490 DELISKYGKAL  500 (514)
Q Consensus       490 d~~~~~l~~~l  500 (514)
                      +.+++.|.+.-
T Consensus       547 ~~L~~aL~~f~  557 (713)
T PRK15399        547 MGLLRGLTEFK  557 (713)
T ss_pred             HHHHHHHHHHH
Confidence            99999887663

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=98.55  E-value=8.4e-06  Score=88.57  Aligned_cols=304  Identities=13%  Similarity=0.163  Sum_probs=160.2

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCCh-hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-ccc
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSG-SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PAL  220 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sG-seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~  220 (514)
                      ..+..+..+..++.|   +.++.+|..+| |.+|.+++..+.         ++.+.|.++.+.|-+...++.++|. |.|
T Consensus       194 ~G~i~eAe~~AA~~f---gAd~tyfvvNGTS~~n~av~~a~~---------~~Gd~VLvdRN~HKSv~haLilsga~PVY  261 (714)
T PRK15400        194 SGPHKEAEEYIARVF---NADRSYMVTNGTSTANKIVGMYSA---------PAGSTVLIDRNCHKSLTHLMMMSDVTPIY  261 (714)
T ss_pred             ChHHHHHHHHHHHHh---CCCcEEEEeCchHHHHHHHHHHhc---------CCCCEEEeecccHHHHHHHHHHcCCeEEE
Confidence            345566667777777   45677775555 555555554442         3345666788888887777777765 333


Q ss_pred             cC----CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCc---EEEEEEccccCCCCcccCChhH
Q 010250          221 HQ----KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPET---IAAFIAEPVIGAGGVIPPPATY  293 (514)
Q Consensus       221 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~---~aavivEpv~~~~G~~~p~~~~  293 (514)
                      -.    .++...+                 .+...|.   .+.+++.+.+. ++.   .++||+.|.+  .|++..    
T Consensus       262 l~P~rn~~Gi~g~-----------------I~~~~~~---~e~i~~~i~~~-p~ak~p~~~vit~pTY--dG~~yd----  314 (714)
T PRK15400        262 FRPTRNAYGILGG-----------------IPQSEFQ---HATIAKRVKET-PNATWPVHAVITNSTY--DGLLYN----  314 (714)
T ss_pred             ecccccccCCccC-----------------CCccccC---HHHHHHHHHhC-ccccCccEEEEECCCC--ccEecC----
Confidence            21    1111111                 0101111   26677777543 221   2578887754  365655    


Q ss_pred             HHHHHHHHHhcCCEEEEechhcCcccccccce-ecc--cCCCC-c--hhchh--hhhcCCcccceeEEe----C-HHHHH
Q 010250          294 FEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDK--YSIKP-D--LVSFA--KALSSAYMPIGAILV----S-PEVSE  360 (514)
Q Consensus       294 L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~--~gv~p-D--iv~~s--K~l~gG~~pig~v~~----~-~~i~~  360 (514)
                      ++.|.++|+.++  +++||++.+.-+....+. ...  .|-.+ |  ++|=|  |-|++ +-..|.+-.    + +.+-+
T Consensus       315 ~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~a-lTQaS~LHvkg~vd~~~~n~  391 (714)
T PRK15400        315 TDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAA-FSQASMIHVKGDVNEETFNE  391 (714)
T ss_pred             HHHHHHHhCCCC--EEEEccchhhhccCcccCCcChhhcCCCCCCceEEEEchhhcccc-hhHHhHHHHcCCCCHHHHHH
Confidence            899999999887  689999876533333221 111  12211 4  55444  75554 111122211    2 22222


Q ss_pred             HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccC------CCcee-E-E--
Q 010250          361 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSD------SPIIG-E-I--  427 (514)
Q Consensus       361 ~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~------~~~~~-~-v--  427 (514)
                      .+.         .| .|.+.+-+-+|..-.+...++.   +.+.++..+.+..+|+.|.++..      ..... + +  
T Consensus       392 a~~---------m~-~STSPsY~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~  461 (714)
T PRK15400        392 AYM---------MH-TTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDT  461 (714)
T ss_pred             HHH---------HH-cCCCcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhccc
Confidence            222         22 3444554445544455555543   35778888888889988877632      10000 0 0  


Q ss_pred             ------------Eeeee-----------eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCC
Q 010250          428 ------------RGTGL-----------ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFI  483 (514)
Q Consensus       428 ------------~g~g~-----------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~  483 (514)
                                  .|...           =+.+..+.-.. ...+....-.+..+.+.|.++||.+-..+ ..+-+..+..
T Consensus       462 ~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~-~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~~iLfl~s~g  540 (714)
T PRK15400        462 TECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKK-DGTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIG  540 (714)
T ss_pred             chhcccCccccccCcccccccccccCCceEEEEeCCCCC-CccccccCCCHHHHHHHHHHcCCEEEecCCCeEEEEeCCC
Confidence                        00000           00011100000 00000011125567788999999988655 4565555578


Q ss_pred             CCHHHHHHHHHHHHHH
Q 010250          484 MSPEEVDELISKYGKA  499 (514)
Q Consensus       484 ~t~e~id~~~~~l~~~  499 (514)
                      .|+++++.+++.|.+.
T Consensus       541 ~t~~~~~~L~~aL~~f  556 (714)
T PRK15400        541 IDKTKALSLLRALTDF  556 (714)
T ss_pred             CCHHHHHHHHHHHHHH
Confidence            9999999999988765

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=98.51  E-value=3.1e-05  Score=76.20  Aligned_cols=337  Identities=16%  Similarity=0.142  Sum_probs=177.2

Q ss_pred             HHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCc
Q 010250          119 PRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK  194 (514)
Q Consensus       119 p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~  194 (514)
                      .++++....-++..+.+   ++...+..-.+...|+.|.+.=+ +.+.+.++++.+.+.|+...+++...       ..+
T Consensus        89 ~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~-------~~~  161 (475)
T KOG0258|consen   89 TDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIA-------GKK  161 (475)
T ss_pred             HHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhc-------CCC
Confidence            44555555555543211   11123344556677777766643 24568899999999999999998752       246


Q ss_pred             cEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC--CCcE
Q 010250          195 KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG--PETI  272 (514)
Q Consensus       195 ~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~--~~~~  272 (514)
                      +.|++.-+-|.=++....-.++...         ++.  ++-...|.             .+.++|++.+.+..  -+-.
T Consensus       162 ~GvliPiPQYPLYsAti~l~~~~~v---------~Yy--LdEe~~W~-------------ld~~el~~~~~eA~k~i~~r  217 (475)
T KOG0258|consen  162 TGVLIPIPQYPLYSATISLLGGTQV---------PYY--LDEESNWS-------------LDVAELERSVDEARKGINPR  217 (475)
T ss_pred             CceEeecCCCchhHHHHHHhCCccc---------cee--eccccCCC-------------CCHHHHHHHHHHHhccCCce
Confidence            6788888888655322111121110         000  00001111             12466776665432  1346


Q ss_pred             EEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-Ccccccc-cceec----ccC-CCCchh------chh
Q 010250          273 AAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGT-MFGCD----KYS-IKPDLV------SFA  339 (514)
Q Consensus       273 aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~-~~~~~----~~g-v~pDiv------~~s  339 (514)
                      +.|+++|.+.+|-+  .+.+-+++|..+|.++|++|+.||||. -+.-.+. ++.+.    +.| -.||-+      +.|
T Consensus       218 ~lvvINPGNPTGqv--ls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvS  295 (475)
T KOG0258|consen  218 ALVVINPGNPTGQV--LSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVS  295 (475)
T ss_pred             EEEEECCCCccchh--hcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeeccc
Confidence            88999999888744  466889999999999999999999976 3333442 33321    122 234432      457


Q ss_pred             hhhcC--CcccceeEE---eCHHHHHHhhhcc------CCCCc----ccccCCCCCcHHHHHHHHHHHHHHhhccHHHHH
Q 010250          340 KALSS--AYMPIGAIL---VSPEVSEVIHSQS------NTLGS----FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV  404 (514)
Q Consensus       340 K~l~g--G~~pig~v~---~~~~i~~~l~~~~------~~~~~----~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~  404 (514)
                      |+..|  | .+-|++=   ..+++.+.+.+-.      .-.+.    ........+.+-      -.+..-+.+.+.+.+
T Consensus       296 KGy~gECG-~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~S------y~~~~~Ekd~il~~l  368 (475)
T KOG0258|consen  296 KGYMGECG-QRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNPPKPGDPS------YDLFSSEKDGILSSL  368 (475)
T ss_pred             ccceeeec-ccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhceecCCCCCCCcc------hhhhhhhhHhHHHHH
Confidence            87655  3 3444432   2455555443210      00000    000001111110      001111235678889


Q ss_pred             HHHHHHHHhhhhhccCCCceeEEEeeeeeEEEE---EccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeC-------
Q 010250          405 NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTE---FADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-------  473 (514)
Q Consensus       405 ~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~---~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g-------  473 (514)
                      +.+.+.+.+.++++   +.+..-+..|.|+.+-   ++.......- .........++.+|+ .-||.+.|+.       
T Consensus       369 ~~ra~l~~~~~ns~---~gi~cn~~qGAMY~fP~i~lP~kaie~A~-~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~G  444 (475)
T KOG0258|consen  369 RSRAKLTEDAFNSL---EGISCNPVQGAMYLFPQISLPPKAIEAAK-ALGIAPDEFYCLKLLEATGICVVPGSGFGQKEG  444 (475)
T ss_pred             HHHhHHHHHHHhhc---CceeeccCccceeecccccCCHHHHHHHH-HhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCc
Confidence            99999999999887   3444445577776652   2211000000 000001223444444 5799998752       


Q ss_pred             C-EEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          474 D-NIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       474 ~-~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      . .+|.+   ...+. + +.++.+++.=.+..
T Consensus       445 tyH~R~T---iLp~~-~-~~i~~~~~fH~~f~  471 (475)
T KOG0258|consen  445 TYHFRTT---ILPPG-L-EIIEKFKKFHAEFM  471 (475)
T ss_pred             eeEEEEe---ecCch-h-HHHHHHHHHHHHHH
Confidence            2 38876   33333 3 56666665544443

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=98.45  E-value=0.00024  Score=76.60  Aligned_cols=157  Identities=18%  Similarity=0.209  Sum_probs=88.9

Q ss_pred             HHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHHHHHH---HhcCC--EEEEechhcCcccc---cc----
Q 010250          257 ANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV---KKYDI--LFIADEVICAFGRL---GT----  322 (514)
Q Consensus       257 ~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~---~~~gi--llI~DEv~tG~gr~---G~----  322 (514)
                      .+.|++.|.+.  ....+.+|+.---..+.|.+-|    |++|.++|   +++|+  ++++|-++.|+.+.   ..    
T Consensus       262 ~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDp----l~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~  337 (608)
T TIGR03811       262 INELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDG----IDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNF  337 (608)
T ss_pred             HHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCC----HHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccc
Confidence            57777777643  2223455555444455687877    99999998   77898  69999999987421   00    


Q ss_pred             -c-------------c------e-----ecccCCC-Cchhchh--hhhcCCcccceeEEeCH-HHHHHhhhccCCCCc--
Q 010250          323 -M-------------F------G-----CDKYSIK-PDLVSFA--KALSSAYMPIGAILVSP-EVSEVIHSQSNTLGS--  371 (514)
Q Consensus       323 -~-------------~------~-----~~~~gv~-pDiv~~s--K~l~gG~~pig~v~~~~-~i~~~l~~~~~~~~~--  371 (514)
                       .             |      .     ....++. .|-+|+.  |.+.-. ++.|+++.++ ++.+.+.....+...  
T Consensus       338 ~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~P-y~~G~ll~Rd~~~~~~~~~~a~Yl~~~~  416 (608)
T TIGR03811       338 IPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIP-YSAGGIVIQDIRMRDVISYFATYVFEKG  416 (608)
T ss_pred             cccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccC-CCeEEEEEeCHHHHHHHhcCcchhcccc
Confidence             0             0      0     0011332 5555553  766555 6888888864 444444322111100  


Q ss_pred             -----ccccCCCCCcH--HHHHHHHHHHHHH--hh---ccHHHHHHHHHHHHHhhhhhc
Q 010250          372 -----FSHGFTYSGHP--VSCAVAIEALKIY--KE---RNIVEQVNKIAPKFQDGVKAF  418 (514)
Q Consensus       372 -----~~~~~t~~~~p--l~~aaa~aal~~~--~~---~~~~~~~~~~~~~l~~~L~~l  418 (514)
                           ....++..++.  ..+++...+++.+  ..   .++.++.-+..+++.+.|++.
T Consensus       417 ~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~  475 (608)
T TIGR03811       417 ADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL  475 (608)
T ss_pred             ccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence                 00012233332  3355555777776  33   345677777888888888763

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=98.45  E-value=1e-05  Score=81.03  Aligned_cols=230  Identities=17%  Similarity=0.132  Sum_probs=133.9

Q ss_pred             ccCCCC--CHHHHHHHHHHHhcCCccccccccCCch---HHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHH
Q 010250          112 TALGGS--EPRLVAAATAQLNTLPFYHSFWNRTTKP---SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYN  186 (514)
Q Consensus       112 ~~lGh~--~p~v~~A~~~~l~~~~~~~~~~~~~~~~---~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~  186 (514)
                      .+||-+  +|++++++.+.+...... .+...+...   ...+++.++..   .+.+.+..+|.-+.|+..++-...   
T Consensus        32 t~lG~s~~~~e~iea~~~~~~~~v~L-e~~l~~g~~~~R~~~~~~~~~~~---~~aea~~ivnnn~aAVll~~~al~---  104 (395)
T COG1921          32 TNLGRSLYSPEAIEAMKEAMRAPVEL-ETDLKTGKRGARLTELAELLCGL---TGAEAAAIVNNNAAAVLLTLNALA---  104 (395)
T ss_pred             ccCCCccCCHHHHHHHHHHhccccee-eeecccchhhHHHHHHHHHHhcc---cchhheeeECCcHHHHHHHHhhhc---
Confidence            567754  799999998887652211 111111111   12344444443   345778888888888887775442   


Q ss_pred             hhcCCCCccEEEEEec---CCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHH
Q 010250          187 NALGRPNKKKFIARQK---SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDL  263 (514)
Q Consensus       187 ~~~~~~~~~~ii~~~~---~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~l  263 (514)
                           .++..|+..-.   ++|.+....+..+|......+.                           .......|++..
T Consensus       105 -----~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~---------------------------tn~t~~~d~~~A  152 (395)
T COG1921         105 -----EGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGT---------------------------TNRTHLKDYELA  152 (395)
T ss_pred             -----cCCeEEEEccccccCCCCChhHHHHHcCCEEEEecc---------------------------cCcCCHHHHHHH
Confidence                 23444444321   3444444444444432211000                           000114677777


Q ss_pred             HHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecccCCCCchhchh--h
Q 010250          264 ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPDLVSFA--K  340 (514)
Q Consensus       264 i~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~~gv~pDiv~~s--K  340 (514)
                      |.+..  ....=+..+..+-.|.+.     ++++.++|++||+++|+|..-. . +.-.... .+.....+|+|+||  |
T Consensus       153 Ine~t--a~llkV~s~~~~f~~~l~-----~~~l~~ia~~~~lpvivD~aSg-~-~v~~e~~l~~~la~GaDLV~~SgdK  223 (395)
T COG1921         153 INENT--ALLLKVHSSNYGFTGMLS-----EEELVEIAHEKGLPVIVDLASG-A-LVDKEPDLREALALGADLVSFSGDK  223 (395)
T ss_pred             hccCC--eeEEEEeecccccccccc-----HHHHHHHHHHcCCCEEEecCCc-c-ccccccchhHHHhcCCCEEEEecch
Confidence            76321  222333444445555553     7889999999999999997642 2 1111112 23344568999998  7


Q ss_pred             hhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc
Q 010250          341 ALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER  398 (514)
Q Consensus       341 ~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~  398 (514)
                      -|+|  ...|.+++++++++.++..       ..+..+-..+...++..++|+.+...
T Consensus       224 llgG--PqaGii~GkKelI~~lq~~-------~l~Ralrv~K~tla~l~~aLe~y~~~  272 (395)
T COG1921         224 LLGG--PQAGIIVGKKELIEKLQSH-------PLKRALRVDKETLAALEAALELYLQP  272 (395)
T ss_pred             hcCC--CccceEechHHHHHHHHhh-------hhhhhhhcCcHhHHHHHHHHHHHcCc
Confidence            8887  5678899999999998753       22234455678888888899877653

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=98.30  E-value=7.9e-05  Score=71.12  Aligned_cols=343  Identities=18%  Similarity=0.208  Sum_probs=186.7

Q ss_pred             ccCCCCCHHHHHHHHHHHhc---CC-ccc----cccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHH
Q 010250          112 TALGGSEPRLVAAATAQLNT---LP-FYH----SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVW  183 (514)
Q Consensus       112 ~~lGh~~p~v~~A~~~~l~~---~~-~~~----~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~  183 (514)
                      ++||.-+....+.+.+.+++   .. ++|    ..|-...++...+-..|   . +...++|..+||=+ +|...+.+. 
T Consensus        74 NSLGLmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~i---V-GA~e~EvavmNsLT-vNlh~Ll~s-  147 (465)
T KOG3846|consen   74 NSLGLMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPI---V-GAQENEVAVMNSLT-VNLHSLLIS-  147 (465)
T ss_pred             cccccCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhh---c-cCCchhhhhHhhhh-hHHHHHHHH-
Confidence            78999888888888887765   22 111    12222333444443333   3 23446788888765 344444333 


Q ss_pred             HHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHH
Q 010250          184 YYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDL  263 (514)
Q Consensus       184 ~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~l  263 (514)
                      .|   +-.++|-||+.=.++|.......-+--..    .+..          ..+.++.--|.+-++...   .+|+-+.
T Consensus       148 Fy---KPTekR~KILlE~kaFPSDhYAiesQ~~l----hG~~----------~e~sm~~iePREGEetlR---teDILd~  207 (465)
T KOG3846|consen  148 FY---KPTEKRFKILLEKKAFPSDHYAIESQCKL----HGIS----------PENSMIQIEPREGEETLR---TEDILDT  207 (465)
T ss_pred             hc---CCcchhhhhhhccCCCCchHHHHHhhhhh----cCCC----------hHHheEEecccccccchh---HHHHHHH
Confidence            22   12245677887777775432221110000    0000          001111111222222222   3566666


Q ss_pred             HHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hh
Q 010250          264 ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KA  341 (514)
Q Consensus       264 i~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~  341 (514)
                      |++.+ +.+|.|.+..+|--+|....    +.+|-..-+..|+++-+|=+|+ +|-.  ......||+  |..|..  |-
T Consensus       208 IEkng-DeiA~v~fSGvqyYTGQ~Fd----i~aIT~Agq~kgc~VGfDLAHA-vgNV--pL~LHdWgV--DFACWCSYKY  277 (465)
T KOG3846|consen  208 IEKNG-DEIALVCFSGVQYYTGQYFD----IGAITFAGQFKGCLVGFDLAHA-VGNV--PLQLHDWGV--DFACWCSYKY  277 (465)
T ss_pred             HHhcC-CeEEEEEeecceeecccccc----hhhhhhcccCCCcEechhhhhh-hcCC--ceEEeecCC--ceEEEeeecc
Confidence            66554 68999999999988887766    6666655556699999999987 6433  334455665  666643  64


Q ss_pred             hcCCcccceeEEeCHHHHHHhhhcc---------------C--CCCcccccCCCCCcHHHHH-HHHHHHHHHhhccHHHH
Q 010250          342 LSSAYMPIGAILVSPEVSEVIHSQS---------------N--TLGSFSHGFTYSGHPVSCA-VAIEALKIYKERNIVEQ  403 (514)
Q Consensus       342 l~gG~~pig~v~~~~~i~~~l~~~~---------------~--~~~~~~~~~t~~~~pl~~a-aa~aal~~~~~~~~~~~  403 (514)
                      +..|--.||++...+.......++-               +  .+.+...|+..+..|+-.. +....|++...-. .++
T Consensus       278 lnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~-~~~  356 (465)
T KOG3846|consen  278 LNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFN-INE  356 (465)
T ss_pred             cccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhh-HHH
Confidence            4333234666665443322111100               0  0001223344455555444 4456777776433 344


Q ss_pred             HHHHH----HHHHhhhhhc--cCCCc---------e--eEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250          404 VNKIA----PKFQDGVKAF--SDSPI---------I--GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG  466 (514)
Q Consensus       404 ~~~~~----~~l~~~L~~l--~~~~~---------~--~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G  466 (514)
                      ++++.    .++...++..  .+++.         +  ..+..+|.-+.+.|..+.             ..+.++|.++|
T Consensus       357 lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp~-------------~~vfqeL~krG  423 (465)
T KOG3846|consen  357 LRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSPT-------------PKVFQELHKRG  423 (465)
T ss_pred             HhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeCCCc-------------hHHHHHHHHcC
Confidence            44443    4444444332  11121         1  123445666666665432             23668999999


Q ss_pred             cEEEe-eCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          467 MLVRV-SGDNIMMSP-PFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       467 v~~~~-~g~~iRi~p-~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      +++.. ..+.||++| |+..|-.|+-.++..|.+++..++
T Consensus       424 v~~DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e  463 (465)
T KOG3846|consen  424 VIGDKRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLE  463 (465)
T ss_pred             eeccccCCCceEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence            99864 357899998 588999999999999999987664

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=98.28  E-value=0.00018  Score=72.03  Aligned_cols=333  Identities=13%  Similarity=0.121  Sum_probs=165.0

Q ss_pred             EccCCcccccCCCCCHHHHH-HHHHHHhcCCcccccc----ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250          104 DSLAGLWCTALGGSEPRLVA-AATAQLNTLPFYHSFW----NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ  178 (514)
Q Consensus       104 D~~s~~~~~~lGh~~p~v~~-A~~~~l~~~~~~~~~~----~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A  178 (514)
                      ++.|-+|.-+.+|--|.|++ -+.+.-+-+..|+++.    .+..+...++--.++++. +-+....-....||.+-|++
T Consensus        75 ~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLT-Gm~VANASm~DeaTAaAEAm  153 (450)
T COG0403          75 VFTSFIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLT-GLDVANASMLDEATAAAEAM  153 (450)
T ss_pred             hhhhhccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHh-CCCcccchhhhhHHHHHHHH
Confidence            44444444556665555554 5444332222222211    011122233445556664 23334555666677666666


Q ss_pred             HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250          179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN  258 (514)
Q Consensus       179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (514)
                      +..-|..     +.++++| +.+..-|-.+...+.     .+-+++++   .+...++                  .+.+
T Consensus       154 ~ma~r~~-----k~k~~~~-~V~~~vhpqt~~Vl~-----Tra~~~g~---~i~~~~~------------------~d~~  201 (450)
T COG0403         154 LMAKRVT-----KKKRNKF-LVPKDVHPQTLDVLR-----TRAEGLGI---EIEVVDA------------------DDLD  201 (450)
T ss_pred             HHHHHhh-----cCcCceE-EecCCCCHHHHHHHH-----hhcccCce---EEEEecc------------------chhh
Confidence            5443321     1223444 456666666544432     11222221   0111110                  0234


Q ss_pred             HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEE--echhcCcccccccceecccCCCCchh
Q 010250          259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA--DEVICAFGRLGTMFGCDKYSIKPDLV  336 (514)
Q Consensus       259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~--DEv~tG~gr~G~~~~~~~~gv~pDiv  336 (514)
                      +|+..    ...++++++++-.+.-|+.+..    +++|.+.++++|+++|+  |=+--++  .-.++     ....||+
T Consensus       202 ~l~~~----~~~~~~gv~vQyP~~~G~~~~d----~~~l~~~~h~~~al~~v~aDplaL~L--L~pPG-----e~GADIv  266 (450)
T COG0403         202 DLESA----DDGDVFGVLVQYPNTFGIVEED----LRALIEAAHSAGALVIVAADPLALGL--LKPPG-----EFGADIV  266 (450)
T ss_pred             hhhhc----cccCeEEEEEecCCCCCccchh----HHHHHHHHhhcCCEEEEEechhHhhc--cCCcc-----ccCCceE
Confidence            44443    2357899999887655434433    99999999999998884  3332222  11111     1224666


Q ss_pred             c-----hhhhhcCCcccceeEEeCHHHHHHhhhccCCCCccc--c---------------------cCCCCCcHHHHHHH
Q 010250          337 S-----FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS--H---------------------GFTYSGHPVSCAVA  388 (514)
Q Consensus       337 ~-----~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~--~---------------------~~t~~~~pl~~aaa  388 (514)
                      +     ||=.|+=|+.-.|++.++++.+..+..+  -.|...  +                     .+..+.|..-+|.+
T Consensus       267 vG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGR--lVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~  344 (450)
T COG0403         267 VGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGR--LVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALA  344 (450)
T ss_pred             EecCcccCCCcCCCCcceeeeeEhHhHhhcCCCc--eeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHH
Confidence            4     4444443434577888888886655321  001000  0                     01112222222211


Q ss_pred             HHHH-HHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH
Q 010250          389 IEAL-KIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK  464 (514)
Q Consensus       389 ~aal-~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~  464 (514)
                      .+.. -++-.   .++.+++.++..++.++|++...   ...+.....|--+.+.-..          .....+..+...
T Consensus       345 As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~---g~~~~~~~fFdt~~v~~~~----------~~~~~l~~~~~~  411 (450)
T COG0403         345 ASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGA---GVELVFDHFFDTFTVRVPE----------EVAEALLAAAIA  411 (450)
T ss_pred             HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCC---ceEeccccceeeEEEecch----------hHHHHHHHHHHh
Confidence            1111 12222   24567888889999999986510   0111111222222222110          134556677777


Q ss_pred             CCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250          465 HGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       465 ~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~  499 (514)
                      .|+-++... +.+-++..-..|+++|+.+++.|...
T Consensus       412 ~G~~L~~~~~~~~~ia~tEt~t~~~i~~l~~~~~~~  447 (450)
T COG0403         412 GGINLRRVDADTVLIALTETTTKEDIDALVAAFGGV  447 (450)
T ss_pred             cCCceeeecCCceEEEeecccCHHHHHHHHHHHhhh
Confidence            888887643 35677766788999999999988764

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=98.24  E-value=0.00018  Score=72.58  Aligned_cols=355  Identities=17%  Similarity=0.191  Sum_probs=178.8

Q ss_pred             eCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccc-cccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHH
Q 010250           96 DVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYH-SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEA  174 (514)
Q Consensus        96 d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~-~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA  174 (514)
                      |.||+.-+..+|+.  ++.+  +|+..+-+.+.+.+....+ ..+........+.-..++.+|......--.-+.+||||
T Consensus        75 ~ld~~~~~~~vS~~--v~~~--~~~~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses  150 (491)
T KOG1383|consen   75 MLDGNPRLGLASGV--VYWG--EPELDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNMIANLFNAPSDSCGCGTVGGSES  150 (491)
T ss_pred             ccCCCcccCeeeEE--EecC--CcchhhHHHHHHhhcCccCccccchhHHHHHHHHHHHHHHhcCCccccCccccccchH
Confidence            34566555555553  3344  5666666666666532222 23333445555666777777754321112336789999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYS  253 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  253 (514)
                      ...+.|.-+.+.....+-.+..+++.. +-|-+-.         .+..-|.   -.+.++++. .+|+.           
T Consensus       151 ~l~~~k~~~~~r~~~k~I~~p~iv~~~-~v~~a~e---------K~a~yf~---v~l~~V~~~~~~~~~-----------  206 (491)
T KOG1383|consen  151 GLAAKKSYRNRRKAQKGIDKPNIVTPQ-NVHAAFE---------KAARYFE---VELREVPLDEGDYRV-----------  206 (491)
T ss_pred             HHHHHHHHHHHHHhccCCCCccccchH-HHHHHHH---------HHHhhEE---EEEEeeeccccceEe-----------
Confidence            888887665443331112233444432 1221100         0000111   111222221 23331           


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh-cCCEEEEechhcCcccc-cccceecccCC
Q 010250          254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK-YDILFIADEVICAFGRL-GTMFGCDKYSI  331 (514)
Q Consensus       254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~-~gillI~DEv~tG~gr~-G~~~~~~~~gv  331 (514)
                        |+..+.+.+.    +++.+++.+-.+-..|.+-+    .++|.++..| |++.+.+|-.-.||--. |. .....|+.
T Consensus       207 --D~~k~~~~i~----eNti~lv~~~~~~p~G~~e~----ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~-~~~~~fdF  275 (491)
T KOG1383|consen  207 --DPGKVVRMID----ENTIMLVGSLPNFPTGEIED----VEKLADLLLEIWDIPIHVDACLGGFINPAGY-LNEEEFDF  275 (491)
T ss_pred             --cHHHHHHHhc----cceEEEEEEcCCCCccchhh----HHHHHHHHHHHhCCceeecccCccccccccc-cCcccccc
Confidence              1233333343    67888888887777788866    9999999999 99999999988887321 21 11223333


Q ss_pred             C-C---chhchh-h-hhcCCcccceeEEeC-HHH-HHHhhhccCCCCcccccCCCCCc--HHHHHHHHHHHHHHhhcc--
Q 010250          332 K-P---DLVSFA-K-ALSSAYMPIGAILVS-PEV-SEVIHSQSNTLGSFSHGFTYSGH--PVSCAVAIEALKIYKERN--  399 (514)
Q Consensus       332 ~-p---Div~~s-K-~l~gG~~pig~v~~~-~~i-~~~l~~~~~~~~~~~~~~t~~~~--pl~~aaa~aal~~~~~~~--  399 (514)
                      . |   .+-+-+ | +|.-  ..+|+++-+ +++ .+.+.-.....|......|..++  ..-.++..+++=.+.+++  
T Consensus       276 r~p~V~Sisa~~HKYGl~~--~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~  353 (491)
T KOG1383|consen  276 RVPGVTSISADGHKYGLAP--AGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYR  353 (491)
T ss_pred             CCCCceeEeeccceeeeee--cCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHH
Confidence            2 2   222222 3 3332  235666654 333 22222111222322333344333  112333444444444444  


Q ss_pred             -HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe--eCCEE
Q 010250          400 -IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV--SGDNI  476 (514)
Q Consensus       400 -~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~--~g~~i  476 (514)
                       ..+++.+....|+++++++....+++    . +.+++.+.+...-.         --++...|.+.|..+-.  ....+
T Consensus       354 ~~~~~ive~~~~l~egie~i~~i~i~g----k-p~vs~~~~~s~~~~---------i~elsd~l~~~GW~lnalq~P~a~  419 (491)
T KOG1383|consen  354 ENTQNIVETARKLREGIENIKGIKIVG----K-PLVSFILFGSNDVN---------IFELSDLLRKKGWILNALQFPAAI  419 (491)
T ss_pred             HHHHHHHHHHHHHHHhhhccccceecC----C-CcEEEEEccCCccc---------hhhhhHHHHhcCcCccccCCCCce
Confidence             35667778888999998864333332    2 23344333322111         22467888899977641  12233


Q ss_pred             EEeCCCCCCHHH-HHHHHHHHHHHHHHHHH
Q 010250          477 MMSPPFIMSPEE-VDELISKYGKALKATEE  505 (514)
Q Consensus       477 Ri~p~~~~t~e~-id~~~~~l~~~l~~~~~  505 (514)
                      -++....+..++ .|+++.-|+++++++..
T Consensus       420 Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~  449 (491)
T KOG1383|consen  420 HICVTRVHAREDVADRFVADIRKVVEELKS  449 (491)
T ss_pred             EEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence            333335566655 57777778888877654

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=98.24  E-value=0.00022  Score=79.90  Aligned_cols=202  Identities=13%  Similarity=0.140  Sum_probs=113.7

Q ss_pred             cEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc-----hhhhhcCC
Q 010250          271 TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS-----FAKALSSA  345 (514)
Q Consensus       271 ~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~-----~sK~l~gG  345 (514)
                      +++++++. .++..|.+..    +++|.++++++|+++|++--...++-.-.+   .  ....||++     ||=.+++|
T Consensus       194 ~~~~v~~q-~Pn~~G~ied----~~~i~~~~h~~gal~~~~ad~~al~ll~~P---g--e~GaDi~vg~~q~fg~p~g~G  263 (939)
T TIGR00461       194 DVFGCLLQ-YPATDGSILD----YKQLIDALHSHKSLVSVAADLMALTLLTPP---G--HYGADIVLGSSQRFGVPMGYG  263 (939)
T ss_pred             CEEEEEEE-CCCCCeEEec----HHHHHHHHHHcCCEEEEEechHHhCCcCCH---H--HcCCcEEeeCCCccCCCCCCC
Confidence            46666553 3455677764    899999999999999986544322111111   1  12347763     33345555


Q ss_pred             cccceeEEeCHHHHHHhhhccC-----CCC--ccc--------cc----CC--CCCcHHHHH-HHHHHHHHHhhcc---H
Q 010250          346 YMPIGAILVSPEVSEVIHSQSN-----TLG--SFS--------HG----FT--YSGHPVSCA-VAIEALKIYKERN---I  400 (514)
Q Consensus       346 ~~pig~v~~~~~i~~~l~~~~~-----~~~--~~~--------~~----~t--~~~~pl~~a-aa~aal~~~~~~~---~  400 (514)
                      +--.|++.+++++...+..+--     ..|  .+.        |.    .|  .+.+...++ .|..-+..+..++   +
T Consensus       264 GP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~i  343 (939)
T TIGR00461       264 GPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNI  343 (939)
T ss_pred             CCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHH
Confidence            4447778888888776643100     000  000        00    00  011111111 1111134443343   4


Q ss_pred             HHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEEEe
Q 010250          401 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMMS  479 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iRi~  479 (514)
                      .+++..+..++.++|.+. ....+..    ..+--+.+.-...          ....+.+.+.++|+.++.. ++.++++
T Consensus       344 A~~~~~~a~~l~~~L~~~-G~~~~~~----~fF~~~~v~~~~~----------~~~~i~~~~~~~gi~l~~~~~~~i~~s  408 (939)
T TIGR00461       344 ARRIHSLTSILANGLEND-PHELINK----TWFDTLTVKVGNG----------ISSELLKAAEEFNINLRAVDTTTVGIA  408 (939)
T ss_pred             HHHHHHHHHHHHHHHHhC-CCcccCC----CccceEEEEeCCC----------CHHHHHHHHHHCCCeeeecCCCEEEEE
Confidence            567788888999988874 2222211    1111222211100          1456889999999998864 4579999


Q ss_pred             CCCCCCHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYG  497 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~  497 (514)
                      ..-..|++||+.+++.|.
T Consensus       409 ~~E~~t~~di~~l~~~~~  426 (939)
T TIGR00461       409 LDETTTKADVENLLKVFD  426 (939)
T ss_pred             eecCCCHHHHHHHHHHhc
Confidence            999999999999999995

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=98.15  E-value=3.7e-06  Score=83.41  Aligned_cols=231  Identities=16%  Similarity=0.141  Sum_probs=55.0

Q ss_pred             ccCCCC--CHHHHHHHHHHHhcCCccc-ccc-ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHh
Q 010250          112 TALGGS--EPRLVAAATAQLNTLPFYH-SFW-NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN  187 (514)
Q Consensus       112 ~~lGh~--~p~v~~A~~~~l~~~~~~~-~~~-~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~  187 (514)
                      .|||-+  +|++.+++.+.+..+...- ..- +.--.....+++.++.++   +.+.+++.|+...|+..++....    
T Consensus        11 TnLGRs~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~lt---gAeaA~VvNnnaAAv~L~l~~la----   83 (367)
T PF03841_consen   11 TNLGRSPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELT---GAEAALVVNNNAAAVLLALNTLA----   83 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccccccccccccccccccc----
Confidence            567764  5788888877665422110 000 000011233455666654   45678899998888888876442    


Q ss_pred             hcCCCCccEEEEEecC---Ccc--cceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHH
Q 010250          188 ALGRPNKKKFIARQKS---YHG--STLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED  262 (514)
Q Consensus       188 ~~~~~~~~~ii~~~~~---yHG--~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~  262 (514)
                          .++ .||+..|-   +-|  +....+..+|.....            +...               ....+.|.++
T Consensus        84 ----~~~-EvIvsRGelVeiGgsFRip~vm~~sGa~lvE------------VGtt---------------N~t~~~Dye~  131 (367)
T PF03841_consen   84 ----KGK-EVIVSRGELVEIGGSFRIPDVMRQSGARLVE------------VGTT---------------NRTHLSDYEK  131 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ----ccc-ccccccccccccccccccccccccccccccc------------cccc---------------cccccccccc
Confidence                233 34433221   111  112222223321111            0000               0111466777


Q ss_pred             HHHHhCCCcEEEEEEccccCC-CCc-ccCChhHHHHHHHHHHhcCCEEEEechhc------CcccccccceecccCCCCc
Q 010250          263 LILKEGPETIAAFIAEPVIGA-GGV-IPPPATYFEKVQAVVKKYDILFIADEVIC------AFGRLGTMFGCDKYSIKPD  334 (514)
Q Consensus       263 li~~~~~~~~aavivEpv~~~-~G~-~~p~~~~L~~l~~l~~~~gillI~DEv~t------G~gr~G~~~~~~~~gv~pD  334 (514)
                      .|.   +++-+.+-+-+.+-. .|. -.++   ++++.+++++||+++|.|-.-.      .+|-.++.-..+.....+|
T Consensus       132 AI~---e~Ta~ll~Vh~Sn~~i~GFt~~~~---~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaD  205 (367)
T PF03841_consen  132 AIT---ENTAALLKVHTSNFRIQGFTGEVS---LEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGAD  205 (367)
T ss_dssp             -----------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-S
T ss_pred             ccc---cccccccccccccccccccccccc---HHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCC
Confidence            775   233344456544332 121 1222   8999999999999999996431      1222222222333444589


Q ss_pred             hhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh
Q 010250          335 LVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK  396 (514)
Q Consensus       335 iv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~  396 (514)
                      +|+||  |-|+|  ...|.+++++++++.++.+       ..+-.+-.+-+.+++-.++|+.+.
T Consensus       206 lV~fSGdKlLGG--PQaGiI~Gkk~lI~~lk~~-------pl~RalrvdK~tla~L~atL~~Y~  260 (367)
T PF03841_consen  206 LVTFSGDKLLGG--PQAGIIVGKKELIEKLKKH-------PLGRALRVDKLTLAALEATLRLYL  260 (367)
T ss_dssp             EEEEETTSSSSS---S-EEEEEEHHHHHHHHHH-------HHTTT-B--HHHHHHHHHHHHH--
T ss_pred             EEEEECCCcCCC--CCeEEEEeCHHHHHHHhhC-------CCcceEeeCHHHHHHHHHHHHHHH
Confidence            99998  78887  4578999999999999753       122345567788888888888665

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=98.11  E-value=0.00013  Score=74.88  Aligned_cols=199  Identities=15%  Similarity=0.187  Sum_probs=93.0

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEech----hcCcccccccceecccCCCCchhc-----hhh
Q 010250          270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV----ICAFGRLGTMFGCDKYSIKPDLVS-----FAK  340 (514)
Q Consensus       270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv----~tG~gr~G~~~~~~~~gv~pDiv~-----~sK  340 (514)
                      +++++|++.-.+. -|.+..    +++|.++++++|+++|+ -+    .+++-+-|.      +  ..||++     ||=
T Consensus       196 ~~~a~v~vq~Pn~-~G~~ed----~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge------~--GADI~vg~~Q~fg~  261 (429)
T PF02347_consen  196 DDTAAVMVQNPNT-FGVFED----IKEIADIAHAAGALVIV-GADPNALGGLKSPGE------Y--GADIVVGEHQTFGI  261 (429)
T ss_dssp             TTEEEEEEESS-T-TSB--T----HHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGG------G--T-SEEEECCTTTT-
T ss_pred             cCeEEEEeecCCC-CceEee----HHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhh------c--CccEEeeCCCCCcc
Confidence            6899999876654 466654    99999999999999997 22    112222222      2  247763     444


Q ss_pred             hhcCCcccceeEEeCHHHHHHhhhcc-----CCCC--ccc--------c------cCCCCCcHHHHH-HHHHHHHHHhhc
Q 010250          341 ALSSAYMPIGAILVSPEVSEVIHSQS-----NTLG--SFS--------H------GFTYSGHPVSCA-VAIEALKIYKER  398 (514)
Q Consensus       341 ~l~gG~~pig~v~~~~~i~~~l~~~~-----~~~~--~~~--------~------~~t~~~~pl~~a-aa~aal~~~~~~  398 (514)
                      .+++|+-..|.+.++++++..+..+-     ...|  .+.        |      .+..+.|...++ ++..-+-.+-.+
T Consensus       262 p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~  341 (429)
T PF02347_consen  262 PMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPE  341 (429)
T ss_dssp             --CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHH
Confidence            56666556788888988777664310     0000  000        0      012233433333 222333444443


Q ss_pred             ---cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe-eCC
Q 010250          399 ---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV-SGD  474 (514)
Q Consensus       399 ---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~-~g~  474 (514)
                         ++.+++..+..++.++|+++...++..    . .++-+.+.....         .....+.+++...|+.... ..+
T Consensus       342 GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~----~-~f~e~v~~~~~~---------~~~~~l~~~~~~~gl~~~~~~~~  407 (429)
T PF02347_consen  342 GLREIAERIHLNAHYLAERLKKIYGLPFDN----P-FFFEFVVVFSKD---------KEVEELLKRGIEGGLNLRYPDDG  407 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCCTTBECSSS----S-SBSSEEEEESS----------HHHHHHHHTT----EEEGGG-SS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCcccCC----C-CceeeeeecCCc---------HHHHHHHHHHHhcCCCccccCCC
Confidence               356778888999999998751112111    1 111111111110         0122344555555643332 235


Q ss_pred             EEEEeCCCCCCHHHHHHHHHHH
Q 010250          475 NIMMSPPFIMSPEEVDELISKY  496 (514)
Q Consensus       475 ~iRi~p~~~~t~e~id~~~~~l  496 (514)
                      .+-+++.-..|+||||.++++|
T Consensus       408 ~~li~~TE~~t~edid~lv~~f  429 (429)
T PF02347_consen  408 ALLICVTETRTKEDIDRLVEAF  429 (429)
T ss_dssp             EEEEE--TT--HHHHHHHHH--
T ss_pred             eEEEEccCCCCHHHHHHHHhcC
Confidence            7899998999999999999875

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=98.10  E-value=6.7e-05  Score=74.72  Aligned_cols=318  Identities=15%  Similarity=0.203  Sum_probs=156.1

Q ss_pred             HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhc----CCCC-ccEEEEEecCCcccceeeeecCCCccccC
Q 010250          148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL----GRPN-KKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~----~~~~-~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      +.-.++.+..+...-..-+|+++|+-+|..|+.+|+.-+...    |... +.-|++.+.--|=+...+...-|.     
T Consensus       145 ~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~-----  219 (510)
T KOG0629|consen  145 EVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGL-----  219 (510)
T ss_pred             HHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhcc-----
Confidence            344455555443222467899999999999999997432111    1111 233444444444432222211111     


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCC--CcccCChhHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAG--GVIPPPATYFEKVQAV  300 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~--G~~~p~~~~L~~l~~l  300 (514)
                        +  ...+..+++.             +-+....+|||+.|.+...+.---+++...-|++  |.+-|    |..|.++
T Consensus       220 --g--td~c~~v~t~-------------e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd----L~~iadi  278 (510)
T KOG0629|consen  220 --G--TDHCIKVKTD-------------ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD----LNGIADI  278 (510)
T ss_pred             --C--CceeEEeccc-------------ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc----HHHHHHH
Confidence              0  1112222221             1223346899998876432211113333333433  66665    9999999


Q ss_pred             HHhcCCEEEEechhcCccccccccee----cccCCC-Cchhchh--hhhcCCcccceeEEeCHHH-HHHhhhccC----C
Q 010250          301 VKKYDILFIADEVICAFGRLGTMFGC----DKYSIK-PDLVSFA--KALSSAYMPIGAILVSPEV-SEVIHSQSN----T  368 (514)
Q Consensus       301 ~~~~gillI~DEv~tG~gr~G~~~~~----~~~gv~-pDiv~~s--K~l~gG~~pig~v~~~~~i-~~~l~~~~~----~  368 (514)
                      |++|+.++++|.+-.|-    -....    ...|++ .|-|+..  |-++.+ ++.|+.+.+.+= ++.-.+...    +
T Consensus       279 C~k~~lWmHvDAAwGGg----lLmS~k~R~kl~Giera~SvtwnpHK~~gap-lqCsa~l~r~~gll~~Cn~~~A~YLFq  353 (510)
T KOG0629|consen  279 CEKHKLWMHVDAAWGGG----LLMSRKHRHKLTGIERANSVTWNPHKLMGAP-LQCSAFLTREEGLLQRCNQMSAIYLFQ  353 (510)
T ss_pred             HHhcCEEEEeecccccc----cccChhhHhhccCccccCceeecHHHhhcCc-chhhHHHHHHHHHHHhhcccchhhhhc
Confidence            99999999999886541    11111    223554 5666665  777766 788888877653 322211000    0


Q ss_pred             CCccc-ccCCCCCcHHHHHHHHHHHHH---Hhh---cc---HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEE
Q 010250          369 LGSFS-HGFTYSGHPVSCAVAIEALKI---YKE---RN---IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEF  438 (514)
Q Consensus       369 ~~~~~-~~~t~~~~pl~~aaa~aal~~---~~~---~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~  438 (514)
                      ...+. .++-.+--.+-|-.-.-..+.   .+.   ++   -++++-+++++|.++|++-.....+......  ...+.|
T Consensus       354 ~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe--~~nv~f  431 (510)
T KOG0629|consen  354 QDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPE--HVNVCF  431 (510)
T ss_pred             cCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCc--eEEEee
Confidence            00111 111111111112111111111   111   22   3566777889999999875322211111111  222322


Q ss_pred             ccCCCCCCCCC-------CccchHHHHHHHHHHCCcEEE---eeC---CEEE--EeCCCCCCHHHHHHHHHHHHHH
Q 010250          439 ADNKSPNEPFP-------PEWGIGAYFGAQCEKHGMLVR---VSG---DNIM--MSPPFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       439 ~~~~~~~~~~~-------~~~~~~~~~~~~l~~~Gv~~~---~~g---~~iR--i~p~~~~t~e~id~~~~~l~~~  499 (514)
                      .-....-...+       .-..++-.+...|.++|....   |.+   +.+|  +++| +.+++|+|.+++.|++.
T Consensus       432 w~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~-a~~~ad~dflldEIerl  506 (510)
T KOG0629|consen  432 WYVPPSLRGWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNP-ALTEADLDFLLDEIERL  506 (510)
T ss_pred             ccCchHhccCcccchhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccc-hhhhhhHHHHHHHHHHh
Confidence            21111000001       111233446677888885543   333   4455  4555 78999999999988764

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=97.94  E-value=0.00086  Score=67.36  Aligned_cols=220  Identities=16%  Similarity=0.197  Sum_probs=107.9

Q ss_pred             HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc-ccee---cccCC-
Q 010250          257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MFGC---DKYSI-  331 (514)
Q Consensus       257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~-~~~~---~~~gv-  331 (514)
                      .+.+|+.+++.+++.+.+|+.-+. +..|..+.   -+++|.++|++|||..|+--+|+ +- .-+ .-..   ...|. 
T Consensus       141 ~~~ie~~i~~~G~~~iLcvlttts-cfapr~~D---~i~~IakiC~~~~IPhlvNnAYg-vQ-~~~~~~~i~~a~~~GRv  214 (389)
T PF05889_consen  141 LEAIEAKIEELGADNILCVLTTTS-CFAPRLPD---DIEEIAKICKEYDIPHLVNNAYG-VQ-SSKCMHLIQQAWRVGRV  214 (389)
T ss_dssp             HHHHHHHHHHHCGGGEEEEEEESS-TTTTB-------HHHHHHHHHHHT--EEEEGTTT-TT--HHHHHHHHHHHHHSTC
T ss_pred             HHHHHHHHHHhCCCCeEEEEEecC-ccCCCCCc---cHHHHHHHHHHcCCceEEccchh-hh-HHHHHHHHHHHHhcCCc
Confidence            477888887777666766665443 33343433   39999999999999999999885 50 000 0000   01121 


Q ss_pred             CCchhchhhhhcCCcccce-e-EEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHH
Q 010250          332 KPDLVSFAKALSSAYMPIG-A-ILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVN  405 (514)
Q Consensus       332 ~pDiv~~sK~l~gG~~pig-~-v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~  405 (514)
                      +.++-.+.|.|-   .|+| + +.+ ++..++.+...  +++     -. +.+|.  .-...+|..+-.   ..+.....
T Consensus       215 da~vqS~dkNF~---VPvGgai~As~~~~~i~~vs~~--YpG-----Ra-s~sp~--ld~~itLl~LG~~g~~~ll~~r~  281 (389)
T PF05889_consen  215 DAFVQSTDKNFM---VPVGGAIMASFDPSGILAVSKE--YPG-----RA-SASPS--LDLFITLLSLGCTGYGALLKERK  281 (389)
T ss_dssp             SEEEEEHHHHHC---EESSHEEEEESSHHHHHHHHHT--SHS-----HB-TSHHH--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeeeecCCCEE---ecCCCcEEEecCHHHHHHHHHH--hhh-----hh-hcccc--hHHHHHHHHHhhhHHHHHHHHHH
Confidence            122235667553   2222 2 223 45666666531  111     11 12221  111222222221   22344444


Q ss_pred             HHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE----eeC------
Q 010250          406 KIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VSG------  473 (514)
Q Consensus       406 ~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~g------  473 (514)
                      +.-.+++++|+++ .++. .+.+.+.....+++.+..-...      .......|...|..+||--.    +.+      
T Consensus       282 ~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~------~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh  355 (389)
T PF05889_consen  282 ASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEI------SQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSH  355 (389)
T ss_dssp             HHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTC------CSSHHHHHHHHHHHTTEESSEEEETSSCEEETT
T ss_pred             HHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhh------ccchhhhHHHHHHhCCcccceeeccCCCccccc
Confidence            4455555555554 2222 1112222233345555422111      00235678889999976421    111      


Q ss_pred             ------CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          474 ------DNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       474 ------~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                            ..+-++-.+-+++||||.++++|+++++
T Consensus       356 ~~~yp~~Ylt~AsaiG~~~eevd~~v~rL~k~i~  389 (389)
T PF05889_consen  356 SSNYPCPYLTAASAIGMTREEVDYFVKRLDKIIK  389 (389)
T ss_dssp             SS--SSSEEEEEE-TT--HHHHHHHHHHHHHHHH
T ss_pred             CCCCchHHHHHHHHhCCCHHHHHHHHHHHHHHhC
Confidence                  4577777788999999999999999875

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=97.87  E-value=0.0043  Score=61.37  Aligned_cols=201  Identities=17%  Similarity=0.127  Sum_probs=123.1

Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC-CCchhchh--hhhcCCccc
Q 010250          272 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSFA--KALSSAYMP  348 (514)
Q Consensus       272 ~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv-~pDiv~~s--K~l~gG~~p  348 (514)
                      .+-|...+.....|+..++..+.      -.  +.++|+|-.-.-++|        ..++ +-|++.+|  |.+|+.  .
T Consensus       145 ~ayv~~~~NeTi~Gv~v~~~p~~------~~--~~~~v~D~SS~ilsr--------~iDvsk~dviyagaQKnlGpa--G  206 (365)
T COG1932         145 DAYVHFCWNETISGVEVPELPDI------GS--DGLLVADASSAILSR--------PIDVSKYDVIYAGAQKNLGPA--G  206 (365)
T ss_pred             ccEEEEecCCcccceEccCCCCC------CC--CceEEEecccHHhcC--------CCChhHcceEEEehhhccCcc--c
Confidence            44466666666667776642221      11  278999965442322        1222 24778877  899884  3


Q ss_pred             ceeEEeCHHHHHHhhhccC-----CCCcccccCCCCCcHHHH-HHHHHHHHHHhhcc----HHHHHHHHHHHHHhhhhhc
Q 010250          349 IGAILVSPEVSEVIHSQSN-----TLGSFSHGFTYSGHPVSC-AVAIEALKIYKERN----IVEQVNKIAPKFQDGVKAF  418 (514)
Q Consensus       349 ig~v~~~~~i~~~l~~~~~-----~~~~~~~~~t~~~~pl~~-aaa~aal~~~~~~~----~~~~~~~~~~~l~~~L~~l  418 (514)
                      ++.++.++++++.+.....     .......++||+.+|.-| .....+++.+++.+    +.++-++..+.|.+.+++-
T Consensus       207 ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s  286 (365)
T COG1932         207 LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS  286 (365)
T ss_pred             eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            8999999999888754210     001234567887766543 34446778887643    5667777777888877654


Q ss_pred             cCC-CceeEEEeeeee-EEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CCEEEEeCCCCCCHHHHHHHH
Q 010250          419 SDS-PIIGEIRGTGLI-LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDNIMMSPPFIMSPEEVDELI  493 (514)
Q Consensus       419 ~~~-~~~~~v~g~g~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~iRi~p~~~~t~e~id~~~  493 (514)
                      .-+ +.+.. ..++.| +.|.+.+.           .+.+.|..++.++|+..-.+   .+.+|.+.--.++.|+++.++
T Consensus       287 ~fy~~~v~~-~~RS~mnV~f~~~~~-----------~ld~~fv~eae~~gl~~lkGhr~vgGmRasiynA~~~e~veaL~  354 (365)
T COG1932         287 DFYRNLVAK-ANRSRMNVTFTLVDA-----------ELDKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPLEDVEALT  354 (365)
T ss_pred             Cccccccch-hhccceeEEEEcCcH-----------HHHHHHHHHHHHcCCceeccccCCCceeeeeecCCCHHHHHHHH
Confidence            111 12222 223333 23444422           24567888888888876532   234999887789999999999


Q ss_pred             HHHHHHHHH
Q 010250          494 SKYGKALKA  502 (514)
Q Consensus       494 ~~l~~~l~~  502 (514)
                      +-++.+.++
T Consensus       355 ~fm~~f~~~  363 (365)
T COG1932         355 DFMDWFEET  363 (365)
T ss_pred             HHHHHHHHh
Confidence            988877654

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=97.85  E-value=0.0041  Score=65.50  Aligned_cols=162  Identities=18%  Similarity=0.224  Sum_probs=91.4

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC-cc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL-PA  219 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~  219 (514)
                      +..+..|..+..++.|   +.++.+| .||-|.||...+..+.         ++.+.|.++.+.|-+...++.++|. |.
T Consensus        68 p~G~i~eAqe~aA~~f---gAd~tyFvvNGTS~ank~vi~a~~---------~~GD~VLvdRN~HKSi~~glilaGa~Pv  135 (557)
T COG1982          68 PEGPIKEAQELAARVF---GADHTYFVVNGTSTANKAVINAVL---------TPGDKVLVDRNCHKSIHHGLILAGATPV  135 (557)
T ss_pred             CCccHHHHHHHHHHHh---CCCceEEEECCccHHHHHHHHhhc---------CCCCEEEecCCccHHHHHHHHHcCCceE
Confidence            4455677777777777   4466666 5555555555554442         3345666788888887666666664 44


Q ss_pred             ccCCCCCC-CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250          220 LHQKFDLP-APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ  298 (514)
Q Consensus       220 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~  298 (514)
                      |......+ ....             .+.+        .+.+++.+.+....+..+|+..|.+  .|+...    +++|.
T Consensus       136 yl~p~~np~~gi~-------------ggI~--------~~~~~~~l~~~~~~~k~~vitnpTY--dGv~~n----~~~i~  188 (557)
T COG1982         136 YLEPSRNPLYGII-------------GGIP--------LETFKEALLAHPDAEKLAVITNPTY--DGVCYN----LRKIV  188 (557)
T ss_pred             EecCCCCcccccc-------------CCCC--------HHHHHHHHHhChhhheeEEEecCcc--ceEeec----HHHHH
Confidence            33221111 0000             0111        3445554443322226788887764  355555    89999


Q ss_pred             HHHHhcCCEEEEechhcCc--ccccccceecccCCCCchhchh--hhhcC
Q 010250          299 AVVKKYDILFIADEVICAF--GRLGTMFGCDKYSIKPDLVSFA--KALSS  344 (514)
Q Consensus       299 ~l~~~~gillI~DEv~tG~--gr~G~~~~~~~~gv~pDiv~~s--K~l~g  344 (514)
                      +.+.++++++.+||.+- +  +..+.. .-...+-..|++|-|  |-+++
T Consensus       189 ~~~~~~~a~v~~deah~-~~~~~~~~l-~~~~~~~~~~~~tqS~HK~l~a  236 (557)
T COG1982         189 ELLHHYGAWVLYDEAHP-AHFDFSPML-PESALNGGADFVTQSTHKLLAA  236 (557)
T ss_pred             HHHhhcCceEEhhhcCc-ccccccccC-cchhhhcCceEEEechhhhhhh
Confidence            99999999999999985 3  222211 111222235677666  55554

>PRK12566 glycine dehydrogenase; Provisional

Probab=97.68  E-value=0.0048  Score=69.13  Aligned_cols=197  Identities=11%  Similarity=0.083  Sum_probs=109.4

Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEe--ch-hcCcccccccceecccCCCCchhc-----hhhh
Q 010250          270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD--EV-ICAFGRLGTMFGCDKYSIKPDLVS-----FAKA  341 (514)
Q Consensus       270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~D--Ev-~tG~gr~G~~~~~~~~gv~pDiv~-----~sK~  341 (514)
                      +++++|++.-.+ .-|.+..    +++|.+++++.|+++|+-  =. .+.+-.-|.        ...||++     ||=.
T Consensus       207 ~~~~~v~vq~P~-~~G~i~d----~~~i~~~~h~~gal~~~~~d~laL~ll~~Pge--------~GADI~vG~~Q~fGvp  273 (954)
T PRK12566        207 HAVFGALLQYPD-THGEIRD----LRPLIDQLHGQQALACVAADLLSLLVLTPPGE--------LGADVVLGSTQRFGVP  273 (954)
T ss_pred             CCEEEEEEECCC-CceEEcc----HHHHHHHHHHcCCEEEEEeCHHHHhCCCChhh--------cCCcEEeeCCCcCCCC
Confidence            468888885433 4466754    899999999999998732  11 111111111        2347763     4445


Q ss_pred             hcCCcccceeEEeCHHHHHHhhhccCCCCcc-----ccc------------------CCCCCcHHHHHHHHHHHHHH-hh
Q 010250          342 LSSAYMPIGAILVSPEVSEVIHSQSNTLGSF-----SHG------------------FTYSGHPVSCAVAIEALKIY-KE  397 (514)
Q Consensus       342 l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~-----~~~------------------~t~~~~pl~~aaa~aal~~~-~~  397 (514)
                      |+.|+--.|++.++++++..+..+  -.|..     ..+                  +..+.+..-+|.+.+..-.+ -.
T Consensus       274 ~~~GGP~ag~~a~~~~~~R~~PGR--ivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp  351 (954)
T PRK12566        274 MGYGGPHAAYFACRDDYKRAMPGR--IIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGP  351 (954)
T ss_pred             CCCCCCCeeeeeehHHHHhhCCCC--ccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhCh
Confidence            555644477778888877665421  01100     000                  11112222222222222122 22


Q ss_pred             cc---HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-C
Q 010250          398 RN---IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-G  473 (514)
Q Consensus       398 ~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g  473 (514)
                      ++   +.+++..+..++.++|.+. .+....    ...|--+.+.-..           ....+.+...+.|+-++.. .
T Consensus       352 ~Gl~~ia~~~~~~a~~l~~~l~~~-g~~~~~----~~fF~~~~v~~~~-----------~~~~~~~~a~~~~~n~r~~~~  415 (954)
T PRK12566        352 EGLKRIAQRVHRLTAILAAGLEAK-GIKRLN----RHFFDTLTLEVGG-----------AQAAIIESAEAARINLRILGR  415 (954)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc-CCcccc----CCccceEEEEccC-----------CHHHHHHHHHHCCCeeEEeCC
Confidence            33   3556777888899988874 222211    1122222221110           1345778888999998865 4


Q ss_pred             CEEEEeCCCCCCHHHHHHHHHHHH
Q 010250          474 DNIMMSPPFIMSPEEVDELISKYG  497 (514)
Q Consensus       474 ~~iRi~p~~~~t~e~id~~~~~l~  497 (514)
                      +.+.++.--.+|++||+.++.+|.
T Consensus       416 ~~~~~s~de~~~~~~~~~~~~~f~  439 (954)
T PRK12566        416 GRLGVSLDETCDEATVARLFDIFL  439 (954)
T ss_pred             CeEEEEeCCCCCHHHHHHHHHHhc
Confidence            568888778899999999999994

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=97.65  E-value=0.0045  Score=61.35  Aligned_cols=213  Identities=12%  Similarity=0.108  Sum_probs=104.0

Q ss_pred             CCHHHHHHHHHH-HhcCCcc-ccccccCCchHHHHHHHHHHhcCcCCCCeEEE---eCChhHHHHHHHHHHHHHHhhcCC
Q 010250          117 SEPRLVAAATAQ-LNTLPFY-HSFWNRTTKPSLDLAKELLEMFTASKMAKVFF---TNSGSEANDTQVKLVWYYNNALGR  191 (514)
Q Consensus       117 ~~p~v~~A~~~~-l~~~~~~-~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~---~~sGseA~~~Alk~a~~~~~~~~~  191 (514)
                      |..+|++|+++. +....+. ++-|+....-+..|++-.++.|   +.+..++   ..|||.|+..|+....        
T Consensus        25 Nq~KVL~Af~~~~vs~~hf~~tTGYGY~D~GRd~le~iyA~vf---gaE~ALVRpq~vSGTHAi~~~Lfg~L--------   93 (403)
T PF06838_consen   25 NQLKVLKAFQENRVSDSHFAGTTGYGYDDIGRDKLERIYADVF---GAEDALVRPQFVSGTHAIALALFGVL--------   93 (403)
T ss_dssp             HHHHHHHHHHHTT--GGGCS---TT-TT-HHHHHHHHHHHHHC---T-SEEEEETTS-SHHHHHHHHHHHH---------
T ss_pred             HHHHHHHHHHHcCCChhhcCCCCcCCCCCccHHHHHHHHHHHh---CchhhhhcccccchHHHHHHHHHhcC--------
Confidence            456777777663 2222221 2333323333445666667777   4456666   5699999999998764        


Q ss_pred             CCccEEEEEecCCcccceeeeecCCC-ccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCC
Q 010250          192 PNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPE  270 (514)
Q Consensus       192 ~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~  270 (514)
                      ...+++++..|.=--.....+...+. +.....+++...   .++..+             -...+.+.+++.+.    +
T Consensus        94 rpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~---~v~L~~-------------dg~~D~~~i~~~~~----~  153 (403)
T PF06838_consen   94 RPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYR---EVPLTE-------------DGTIDWEAIKKALK----P  153 (403)
T ss_dssp             -TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEE---E--B-T-------------TSSB-HHHHHHHHH----T
T ss_pred             CCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeE---EEeecC-------------CCCcCHHHHHHhhc----c
Confidence            23456666543211111111111111 111122221111   111100             01112466777665    4


Q ss_pred             cEEEEEEccccCCCCcccCChhHHHHHHHHHHhc--CCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCc
Q 010250          271 TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY--DILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAY  346 (514)
Q Consensus       271 ~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~--gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~  346 (514)
                      ++..|.+-=.-|-.---..+-+.++++.++.++.  ++++.+|..|..|--     ..+...+-.|++  ++=|..|||+
T Consensus       154 ~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE-----~~EP~~vGADl~aGSLIKNpGGgi  228 (403)
T PF06838_consen  154 NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVE-----TQEPTEVGADLMAGSLIKNPGGGI  228 (403)
T ss_dssp             TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTS-----SS-GGGGT-SEEEEETTSGGGTTT
T ss_pred             CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceecc-----ccCccccchhheeccceeCCCCCc
Confidence            5677766444332222222334566666666654  789999998876622     234445667888  5779999999


Q ss_pred             ccce-eEEeCHHHHHHhhhc
Q 010250          347 MPIG-AILVSPEVSEVIHSQ  365 (514)
Q Consensus       347 ~pig-~v~~~~~i~~~l~~~  365 (514)
                      .|.| ++++++++++....+
T Consensus       229 AptGGYIaGr~~lVe~~a~R  248 (403)
T PF06838_consen  229 APTGGYIAGRKDLVERAAYR  248 (403)
T ss_dssp             -SS-EEEEESHHHHHHHHHH
T ss_pred             cCcCCEEechHHHHHHHHhh
Confidence            8876 577899999887543

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=97.19  E-value=0.14  Score=52.33  Aligned_cols=222  Identities=16%  Similarity=0.158  Sum_probs=110.4

Q ss_pred             HHHHHHHHHhC-CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceeccc-----CC
Q 010250          258 NNLEDLILKEG-PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY-----SI  331 (514)
Q Consensus       258 ~~le~li~~~~-~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~-----gv  331 (514)
                      +.|++.|.+.. ..-+-.+++ ...|++|.-..  +.|.+|..+|+++|++|.+|.+|+|-     .+.++.+     |+
T Consensus       220 ~~L~~AIe~D~arGlIPf~v~-at~GTT~~ca~--D~l~elg~Vc~~~glWLHVDAAYAGs-----a~iCpE~r~l~rGi  291 (511)
T KOG0628|consen  220 DTLRKAIEEDIARGLIPFFVC-ATLGTTSSCAF--DELEELGPVCREEGLWLHVDAAYAGS-----AFICPEFRYLMRGI  291 (511)
T ss_pred             HHHHHHHHHHHhCCCccEEEE-EeecCcccccc--ccHHHhcchhhhcCEEEEeehhhccc-----cccCHHHHHHhhcc
Confidence            45555555421 233444444 44566555443  45999999999999999999999853     2333322     33


Q ss_pred             C-Cchh--chhhhhc-----------CCcccce-eEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHH----HHHHHHH
Q 010250          332 K-PDLV--SFAKALS-----------SAYMPIG-AILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC----AVAIEAL  392 (514)
Q Consensus       332 ~-pDiv--~~sK~l~-----------gG~~pig-~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~----aaa~aal  392 (514)
                      + .|-.  ..+|.+-           .| ..+. +.-+++...+.-..      ...+-+..+.-|++-    .--.-++
T Consensus       292 e~aDSfn~n~hK~~~vnfDCs~lWvkd~-~~~~~~~~vdp~yL~h~~~------~~~~Dyrhwqipl~rRfRSLKlWfv~  364 (511)
T KOG0628|consen  292 EYADSFNFNPHKWLLVNFDCSPLWVKDG-TKLSRAFNVDPLYLKHAYQ------GSAPDYRHWQIPLGRRFRSLKLWFVL  364 (511)
T ss_pred             hhhccccCChhheeEEeeeeecceeecC-ceeeeeeecChHhhcchhh------ccCCCccccccccccchhhHHHHHHH
Confidence            2 3433  2356432           12 1222 12223332222111      012222333334321    1112234


Q ss_pred             HHHhhccHHHHHHHHH---HHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC-cE
Q 010250          393 KIYKERNIVEQVNKIA---PKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG-ML  468 (514)
Q Consensus       393 ~~~~~~~~~~~~~~~~---~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-v~  468 (514)
                      +.+.-+++.+++++..   +.+.+.+.+-.+..++ ..+-.|+ +.|.+.+..          ...+.+..++...| |.
T Consensus       365 R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~-~~~~lgL-vcFRlk~~N----------~~ne~Ll~~in~~g~i~  432 (511)
T KOG0628|consen  365 RSYGVENLQNYIREHVRLAKEFETLVRADPRFEIV-NKRILGL-VCFRLKGDN----------EINEALLNRLNSSGRIH  432 (511)
T ss_pred             HHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceee-cccccce-eEEeecCCc----------HHHHHHHHHHHhcCcEE
Confidence            4444456666655543   3333333221111121 1122232 234443321          13566777777766 33


Q ss_pred             EEe---eCCE-EEEeCCCC-CCHHHHHHHHHHHHHHHHHHHHH
Q 010250          469 VRV---SGDN-IMMSPPFI-MSPEEVDELISKYGKALKATEER  506 (514)
Q Consensus       469 ~~~---~g~~-iRi~p~~~-~t~e~id~~~~~l~~~l~~~~~~  506 (514)
                      ..+   .|.. |||+.... .+++||++.-+.|.+....+.+.
T Consensus       433 l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~~~  475 (511)
T KOG0628|consen  433 LVPASLHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELFEA  475 (511)
T ss_pred             EEEeeecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence            443   2444 89886544 56789999999999988775543

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=96.72  E-value=0.4  Score=47.48  Aligned_cols=282  Identities=13%  Similarity=0.125  Sum_probs=140.8

Q ss_pred             chHHHHHHHHHHhc---CcC--CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc
Q 010250          144 KPSLDLAKELLEMF---TAS--KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP  218 (514)
Q Consensus       144 ~~~~ela~~L~~~~---~~~--~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~  218 (514)
                      -...+|++.|.++.   ++.  +-..++|.++.++-..+|+-..--.  ........+|+...+.|.-....+--+.. .
T Consensus        43 f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~--~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s-~  119 (363)
T PF04864_consen   43 FISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPN--ASPSSSPASVVAAAPYYSSYPEQTDFFDS-R  119 (363)
T ss_dssp             TS-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHH--T-TTSSSEEEEE-SS--CHHHHHCCCT-B-T
T ss_pred             eccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCC--CCCCCCCceeEecCCCccchHHHHHhccc-c
Confidence            34456666666655   321  2246788888888888877644211  11223456788888877544211110000 0


Q ss_pred             cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ  298 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~  298 (514)
                      .+                  .|.++..     .|.           ....+....=+++.|.|+.|....+         
T Consensus       120 ~y------------------~w~Gda~-----~~~-----------~~~~~~~~IElVTSPNNPDG~lr~~---------  156 (363)
T PF04864_consen  120 LY------------------KWAGDAS-----NFK-----------NSDNPSPYIELVTSPNNPDGQLREA---------  156 (363)
T ss_dssp             TE------------------EEEEECC-----CGT-----------T-S-CCGEEEEEESS-TTT---------------
T ss_pred             Cc------------------cccccHH-----hhc-----------cCCCCCCeEEEEeCCCCCcccccch---------
Confidence            00                  0111000     000           1112345666778887766543222         


Q ss_pred             HHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccceeEEeCH-HHHHHhhhccCCCCccccc
Q 010250          299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILVSP-EVSEVIHSQSNTLGSFSHG  375 (514)
Q Consensus       299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~~~-~i~~~l~~~~~~~~~~~~~  375 (514)
                       +++.-+..+|.|=+|----.|    .+.. -.+-||.  |+||.-|=++.++|..++++ ++.+.+.       .+...
T Consensus       157 -V~~g~~~k~I~D~AYYWPhyT----pI~~-~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~-------~y~~l  223 (363)
T PF04864_consen  157 -VLNGSSGKVIHDLAYYWPHYT----PITA-PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMT-------KYMEL  223 (363)
T ss_dssp             -SSTTTEEEEEEE-TT-STTTS-------S--B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHH-------HHHHH
T ss_pred             -hcCCCCcceeeeeeeeccccc----ccCC-CCCCceEEEEEecccCccccccceeeecCHHHHHHHH-------HHHHH
Confidence             235556678999887411111    1111 1234665  78895443338999988865 5666654       33455


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhh----c----cH----HHHHHHHHHHHHhhhhhc-----cCC-----CceeEEE-eeee
Q 010250          376 FTYSGHPVSCAVAIEALKIYKE----R----NI----VEQVNKIAPKFQDGVKAF-----SDS-----PIIGEIR-GTGL  432 (514)
Q Consensus       376 ~t~~~~pl~~aaa~aal~~~~~----~----~~----~~~~~~~~~~l~~~L~~l-----~~~-----~~~~~v~-g~g~  432 (514)
                      +|.+.+-=++.-|+..|+.+.+    +    ++    .+.++++-++|++.+..-     .+.     .+...++ ....
T Consensus       224 nTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPa  303 (363)
T PF04864_consen  224 NTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPA  303 (363)
T ss_dssp             HCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---S
T ss_pred             hcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCC
Confidence            6888777677777777765532    1    34    345666666677666542     111     1122233 3455


Q ss_pred             eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250          433 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------GDNIMMSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       433 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------g~~iRi~p~~~~t~e~id~~~~~l~~  498 (514)
                      +.++.+..+..            ..+...|++.||+.+.+      ...+|++  +..++++.|.++++|..
T Consensus       304 fAWlkCe~eed------------~DC~~~l~~~~I~tr~G~~fga~~ryVRlS--ml~~~d~Fd~l~~rL~~  361 (363)
T PF04864_consen  304 FAWLKCEREED------------EDCYAVLREAKIITRSGVLFGADSRYVRLS--MLKRDDDFDQLLERLSK  361 (363)
T ss_dssp             EEEEEESSCGG------------SSHHHHHHCTTEEEEEGGGGTS-TTEEEEE--SSS-HHHHHHHHHHHHC
T ss_pred             eEEEecCCccc------------ccHHHHHHhCCcccCCCCccCCCCCeEEEe--ccCCHHHHHHHHHHHHh
Confidence            67777764321            11456778889988864      2569999  89999999999999874

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=96.70  E-value=0.071  Score=52.75  Aligned_cols=190  Identities=15%  Similarity=0.111  Sum_probs=97.6

Q ss_pred             HHHHHHHHHhcCCEEEEechhc-Ccccccc-cceecccCCCCchhc--hhhhhcCCcccceeEEeCHHHHHH--------
Q 010250          294 FEKVQAVVKKYDILFIADEVIC-AFGRLGT-MFGCDKYSIKPDLVS--FAKALSSAYMPIGAILVSPEVSEV--------  361 (514)
Q Consensus       294 L~~l~~l~~~~gillI~DEv~t-G~gr~G~-~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v~~~~~i~~~--------  361 (514)
                      .+++|++|++.|++|.+|=+|- |+--.|. .-.+++    .||||  .-|+|-|  -+-|.+..++.+...        
T Consensus       206 YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey----~DiVTTTTHKsLRG--PRg~mIFyRkGvk~~~~k~g~~i  279 (477)
T KOG2467|consen  206 YARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEY----CDIVTTTTHKSLRG--PRGAMIFYRKGVKSIKPKQGKEI  279 (477)
T ss_pred             HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccc----cceeeccccccccC--CcceeEEEeccCCcCCCCCCCcc
Confidence            6899999999999999998864 5422221 122333    47775  4589988  355555555533211        


Q ss_pred             ---hhhccC-CCCcccccCCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeE
Q 010250          362 ---IHSQSN-TLGSFSHGFTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLIL  434 (514)
Q Consensus       362 ---l~~~~~-~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~  434 (514)
                         ++..-+ .+=+...|+..+..-.++|.   ||+.....   ....++.++.+.|.+.|.+. .+.+++.-. ...++
T Consensus       280 ~ydlE~kINfaVFP~lQGGPHNhtIaalAv---ALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGT-DnHlv  354 (477)
T KOG2467|consen  280 LYDLEDKINFAVFPGLQGGPHNHTIAALAV---ALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGT-DNHLV  354 (477)
T ss_pred             eechhhhhhhhccccccCCCCcchHHHHHH---HHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCc-cceEE
Confidence               110000 00011223333222223333   34444333   34677888888888888775 334433211 12234


Q ss_pred             EEEEccCCCCCCCCCCccchHHHHHHHH---HHCCcEEEe----eCCEEEEeCCCCCC----HHHHHHHHHHHHHHHH
Q 010250          435 GTEFADNKSPNEPFPPEWGIGAYFGAQC---EKHGMLVRV----SGDNIMMSPPFIMS----PEEVDELISKYGKALK  501 (514)
Q Consensus       435 ~i~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~Gv~~~~----~g~~iRi~p~~~~t----~e~id~~~~~l~~~l~  501 (514)
                      -+++.+....       ....+.+++.+   .++.-+...    ..+.||+.-|...|    ++|..+..+-|.++++
T Consensus       355 LvDLr~~G~d-------GarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~  425 (477)
T KOG2467|consen  355 LVDLRPKGVD-------GARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK  425 (477)
T ss_pred             EEeccccCCc-------hHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence            4455432211       11233333332   122211110    12469998886554    6888888888887765

>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]

Probab=95.73  E-value=0.66  Score=45.79  Aligned_cols=133  Identities=18%  Similarity=0.283  Sum_probs=73.2

Q ss_pred             ccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc----eecccC-CCCch-h--chhhhhcCCccccee
Q 010250          280 VIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF----GCDKYS-IKPDL-V--SFAKALSSAYMPIGA  351 (514)
Q Consensus       280 v~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~----~~~~~g-v~pDi-v--~~sK~l~gG~~pig~  351 (514)
                      -.+.+| +-|..+-+++|+++.++.+.+-++|-++.|| -.|...    +..++- ..-++ +  +|+|.||-=+-++|+
T Consensus       207 aHNPTG-vDPt~eqw~ki~~~~~~k~~~pffDmAYQGf-aSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGLYgERvGa  284 (427)
T KOG1411|consen  207 AHNPTG-VDPTKEQWEKISDLIKEKNLLPFFDMAYQGF-ASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGLYGERVGA  284 (427)
T ss_pred             hcCCCC-CCccHHHHHHHHHHhhhccccchhhhhhccc-ccCCchhhHHHHHHHHHcCCceEeehhhhhhcchhhhccce
Confidence            455556 6778899999999999999999999999999 555421    121210 01122 2  588977741145665


Q ss_pred             E---EeCHHHHHHhhhccCCCCcccccCCCCCcHHHHH-HHHHHHH-------HHhh-ccHHHHHHHHHHHHHhhhhhc
Q 010250          352 I---LVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA-VAIEALK-------IYKE-RNIVEQVNKIAPKFQDGVKAF  418 (514)
Q Consensus       352 v---~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~a-aa~aal~-------~~~~-~~~~~~~~~~~~~l~~~L~~l  418 (514)
                      +   +-+++....+.++   .. ...-..|+.+|+--| .+...|.       ...+ +.+.+++..+++.|.+.|...
T Consensus       285 ~svvc~~ad~A~rV~SQ---lk-~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~  359 (427)
T KOG1411|consen  285 LSVVCKDADEAKRVESQ---LK-ILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKE  359 (427)
T ss_pred             eEEEecCHHHHHHHHHH---HH-HHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcC
Confidence            3   4455555554432   11 112234444444222 2221121       1111 224566666677777777653

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]

Probab=94.57  E-value=1  Score=43.85  Aligned_cols=195  Identities=17%  Similarity=0.257  Sum_probs=109.4

Q ss_pred             cCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc----cceeccc---CCCCchh--chhhhhcCCccccee
Q 010250          281 IGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT----MFGCDKY---SIKPDLV--SFAKALSSAYMPIGA  351 (514)
Q Consensus       281 ~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~----~~~~~~~---gv~pDiv--~~sK~l~gG~~pig~  351 (514)
                      .+++| +-|.++-+..|.++.++.+.+..+|-++.|| -.|.    .|+..++   |. +=++  +|+|.+|-=.-++|.
T Consensus       188 hNPTG-mDPT~EQW~qia~vik~k~lf~fFDiAYQGf-ASGD~~~DawAiR~fV~~g~-e~fv~QSFaKNfGlYneRvGn  264 (410)
T KOG1412|consen  188 HNPTG-MDPTREQWKQIADVIKSKNLFPFFDIAYQGF-ASGDLDADAWAIRYFVEQGF-ELFVCQSFAKNFGLYNERVGN  264 (410)
T ss_pred             cCCCC-CCCCHHHHHHHHHHHHhcCceeeeehhhccc-ccCCccccHHHHHHHHhcCC-eEEEEhhhhhhcccccccccc
Confidence            56666 6778899999999999999999999999999 5554    3444332   21 1123  588966531145663


Q ss_pred             ---EEeCHHHHHHhhhccCCCCcccccCCCCCcH-HHHHHHHHHHHHHh--h------ccHHHHHHHHHHHHHhhhhhcc
Q 010250          352 ---ILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP-VSCAVAIEALKIYK--E------RNIVEQVNKIAPKFQDGVKAFS  419 (514)
Q Consensus       352 ---v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~p-l~~aaa~aal~~~~--~------~~~~~~~~~~~~~l~~~L~~l~  419 (514)
                         ++-++.++..+.++-    ....-.+++.+| .++....+.|+.-+  +      +.+..++.+++..|++.|..|.
T Consensus       265 ltvv~~n~a~i~~v~SQl----~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~  340 (410)
T KOG1412|consen  265 LTVVVNNPAVIAGVKSQL----TLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALK  340 (410)
T ss_pred             eEEEecChhHHHHHHHHH----HHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence               334566665555421    112234554433 23333444443111  1      1234677888888888888872


Q ss_pred             CCCcee--EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHH
Q 010250          420 DSPIIG--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVSGDNIMMSPPFIMSPEEVDELISKY  496 (514)
Q Consensus       420 ~~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l  496 (514)
                       -|.-.  -+...|++-.--+.                ..-.+.|.+ +-|+..+.| .|-|+   ..+...++....+|
T Consensus       341 -TPGtWDHI~~QiGMFSyTGLt----------------p~qV~~li~~h~vyLl~~G-RInis---GLN~~NveyVAkAI  399 (410)
T KOG1412|consen  341 -TPGTWDHITQQIGMFSYTGLT----------------PAQVDHLIENHKVYLLSDG-RINIS---GLNMKNVEYVAKAI  399 (410)
T ss_pred             -CCCcHHHHHhhccceeecCCC----------------HHHHHHHHHhceEEEecCC-cEeee---ccccccHHHHHHHH
Confidence             12111  12223322111111                112345554 456655544 45555   56677888888888


Q ss_pred             HHHHHHH
Q 010250          497 GKALKAT  503 (514)
Q Consensus       497 ~~~l~~~  503 (514)
                      ++++..+
T Consensus       400 de~Vr~~  406 (410)
T KOG1412|consen  400 DETVRAI  406 (410)
T ss_pred             HHHHHhh
Confidence            8887654

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=93.84  E-value=0.32  Score=43.09  Aligned_cols=59  Identities=10%  Similarity=0.081  Sum_probs=44.9

Q ss_pred             ccCCchHHHHHHHHHHhcC---cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcc
Q 010250          140 NRTTKPSLDLAKELLEMFT---ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHG  206 (514)
Q Consensus       140 ~~~~~~~~ela~~L~~~~~---~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG  206 (514)
                      .+..+....+++.+.+.++   ..+.++|++++++++|++.++++..        ...+.|++.++.|+|
T Consensus        92 ~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~--------dpGD~VlVp~P~Y~~  153 (153)
T PLN02994         92 HGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIA--------DPGDAFLVPTPYYAA  153 (153)
T ss_pred             CCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHc--------CCCCEEEEeCCCCCC
Confidence            3455666777777777654   2356799999999999999998774        345789999999975

>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]

Probab=92.79  E-value=0.9  Score=43.14  Aligned_cols=55  Identities=18%  Similarity=0.275  Sum_probs=39.1

Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcc-cCChhHHHHHHHHHHhcCCEEEEechh
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVI-PPPATYFEKVQAVVKKYDILFIADEVI  314 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~-~p~~~~L~~l~~l~~~~gillI~DEv~  314 (514)
                      .+++.+++.+++.+++.+-+|....     .+. +-.|+-+++|..+|..|++.-|+..+|
T Consensus       141 tdleav~~~iee~g~dcilci~stt-----scfapr~pd~leaiaaica~~diphivnnay  196 (432)
T KOG3843|consen  141 TDLEAVEAIIEELGEDCILCIHSTT-----SCFAPRSPDNLEAIAAICAAHDIPHIVNNAY  196 (432)
T ss_pred             HhHHHHHHHHHHhCCceEEEEeecc-----cccCCCCCchHHHHHHHHHccCchhhhcccc
Confidence            3467777888877776555544332     222 224567999999999999999999876

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=91.07  E-value=3.8  Score=39.86  Aligned_cols=98  Identities=15%  Similarity=0.147  Sum_probs=58.9

Q ss_pred             HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc--CCEEEEechhcCcccccccceecccCCCCc
Q 010250          257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY--DILFIADEVICAFGRLGTMFGCDKYSIKPD  334 (514)
Q Consensus       257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~--gillI~DEv~tG~gr~G~~~~~~~~gv~pD  334 (514)
                      .+.+...+.    +++..|.+--.-|-+---..+-+.++++..+.++-  ++++.+|..|..|--     ..+...+..|
T Consensus       155 ~~~v~~~i~----~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE-----~~EPt~vGaD  225 (416)
T COG4100         155 IQAVKTAIS----DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVE-----EKEPTHVGAD  225 (416)
T ss_pred             HHHHHHhcC----ccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhh-----ccCccccchh
Confidence            445555443    45666665444332211111224567777777764  688999998865521     2344456678


Q ss_pred             hh--chhhhhcCCcccce-eEEeCHHHHHHhh
Q 010250          335 LV--SFAKALSSAYMPIG-AILVSPEVSEVIH  363 (514)
Q Consensus       335 iv--~~sK~l~gG~~pig-~v~~~~~i~~~l~  363 (514)
                      ++  ++-|.-|||..-.| ++.+++++++...
T Consensus       226 liAGSLIKNpGGgiaktGGYiaGk~~~ve~~~  257 (416)
T COG4100         226 LIAGSLIKNPGGGIAKTGGYIAGKAELVEAAA  257 (416)
T ss_pred             hhccceeeCCCCceeeccceeechHHHHHhhc
Confidence            87  46698888876655 5667788887654

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=85.61  E-value=49  Score=35.97  Aligned_cols=81  Identities=15%  Similarity=0.210  Sum_probs=50.2

Q ss_pred             cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeee--EEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCE
Q 010250          399 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI--LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDN  475 (514)
Q Consensus       399 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~  475 (514)
                      ++..++....-.|..+|+.. .+.++..    ..+  +-+.+..             ..+.+..+..++++-.+-. .+.
T Consensus       395 ~IArrvh~~T~~l~~~l~~a-ghel~~k----~fFDTLkI~~~~-------------s~~~~l~rA~~~~iNlr~~ed~t  456 (1001)
T KOG2040|consen  395 EIARRVHNLTLILAEGLKNA-GHELQHK----PFFDTLKIRCGC-------------SAEEVLDRAAKRQINLRLVEDGT  456 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHhhc-chhhccc----cccceEEEEecC-------------cHHHHHHHHHhhcCceEEeecCc
Confidence            35566777777888888754 1222211    111  1222322             1345666777777777754 345


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYG  497 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~  497 (514)
                      |-++.--+.+++|+|.++.+|.
T Consensus       457 igvslDETv~~~DvddLl~vf~  478 (1001)
T KOG2040|consen  457 IGVSLDETVTEKDVDDLLWVFN  478 (1001)
T ss_pred             eEEeecccccHHHHHHHHHHHc
Confidence            7788667889999999999986

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	514
3nui_A	478	Crystal Structure Of Omega-Transferase From Vibrio		1e-96
4grx_A	465	Structure Of An Omega-Aminotransferase From Paracoc		4e-96
4e3q_A	473	Pmp-Bound Form Of Aminotransferase Crystal Structur		2e-94
4e3r_A	473	Plp-Bound Aminotransferase Mutant Crystal Structure		2e-92
3gju_A	459	Crystal Structure Of A Putative Aminotransferase (M		1e-89
3fcr_A	459	Crystal Structure Of Putative Aminotransferase (Yp_		2e-84
3hmu_A	472	Crystal Structure Of A Class Iii Aminotransferase F		2e-82
4a6r_A	459	Crystal Structure Of The Omega Transaminase From Ch		2e-78
3i5t_A	476	Crystal Structure Of Aminotransferase Prk07036 From		3e-64
3du4_A	448	Crystal Structure Of 7-Keto-8-Aminopelargonic Acid		1e-60
3dod_A	448	Crystal Structure Of Plp Bound 7,8-diaminopelargoni		1e-60
3n5m_A	452	Crystals Structure Of A Bacillus Anthracis Aminotra		2e-59
3a8u_X	449	Crystal Structure Of Omega-Amino Acid:pyruvate Amin		2e-50
3i4j_A	430	Crystal Structure Of Aminotransferase, Class Iii Fr		5e-43
2eo5_A	419	Crystal Structure Of 4-Aminobutyrate Aminotransfera		2e-41
3lg0_A	422	Structure Of Plasmodium Falciparum Ornithine Delta-		3e-39
2e54_A	385	Crystal Structure Of Acetylornithine Aminotransfera		8e-39
1d7r_A	433	Crystal Structure Of The Complex Of 2,2-Dialkylglyc		2e-38
1z3z_A	431	The Crystal Structure Of A Dgd Mutant: Q52a Length		2e-38
1dgd_A	432	An Alkali Metal Ion Size-Dependent Switch In The Ac		3e-38
2ord_A	397	Crystal Structure Of Acetylornithine Aminotransfera		3e-38
1m0n_A	433	Structure Of Dialkylglycine Decarboxylase Complexed		3e-38
2pb0_A	420	Structure Of Biosynthetic N-Acetylornithine Aminotr		1e-37
1z7d_A	433	Ornithine Aminotransferase Py00104 From Plasmodium		1e-37
2eh6_A	375	Crystal Structure Of Acetylornithine Aminotransfera		8e-37
1szk_A	426	The Structure Of Gamma-Aminobutyrate Aminotransfera		2e-36
1sf2_A	426	Structure Of E. Coli Gamma-Aminobutyrate Aminotrans		2e-36
1szs_A	426	The Structure Of Gamma-aminobutyrate Aminotransfera		6e-36
1szu_A	426	The Structure Of Gamma-Aminobutyrate Aminotransfera		6e-36
4adb_A	406	Structural And Functional Study Of Succinyl-ornithi		1e-35
3ruy_A	392	Crystal Structure Of The Ornithine-Oxo Acid Transam		4e-35
1qj3_A	429	Crystal Structure Of 7,8-Diaminopelargonic Acid Syn		5e-33
3nx3_A	395	Crystal Structure Of Acetylornithine Aminotransfera		6e-33
1s0a_A	429	Crystal Structure Of The Y17f Mutant Of 7,8- Diamin		9e-33
1s08_A	429	Crystal Structure Of The D147n Mutant Of 7,8- Diami		2e-32
1s07_A	429	Crystal Structure Of The R253a Mutant Of 7,8-Diamin		4e-32
1mgv_A	429	Crystal Structure Of The R391a Mutant Of 7,8-Diamin		4e-32
1dty_A	429	Crystal Structure Of Adenosylmethionine-8-Amino-7-O		4e-32
1s09_A	429	Crystal Structure Of The Y144f Mutant Of 7,8- Diami		6e-32
1s06_A	429	Crystal Structure Of The R253k Mutant Of 7,8- Diami		7e-32
2byj_A	439	Ornithine Aminotransferase Mutant Y85i Length = 439		1e-31
1oat_A	439	Ornithine Aminotransferase Length = 439		2e-31
2can_A	402	Human Ornithine Aminotransferase Complexed With L-C		3e-31
2byl_A	439	Structure Of Ornithine Aminotransferase Triple Muta		1e-30
1vef_A	395	Acetylornithine Aminotransferase From Thermus Therm		1e-29
3tft_A	457	Crystal Structure Of 7,8-Diaminopelargonic Acid Syn		1e-29
3lv2_A	462	Crystal Structure Of Mycobacterium Tuberculosis 7,8		8e-29
3bv0_A	437	Crystal Structure Of Plp Bound 7,8-Diaminopelargoni		1e-28
3r4t_A	467	Crystal Structure Of 4-Aminobutyrate Aminotransfera		3e-27
4ffc_A	453	Crystal Structure Of A 4-Aminobutyrate Aminotransfe		2e-26
3oks_A	451	Crystal Structure Of 4-Aminobutyrate Transaminase F		2e-25
4atp_A	456	Structure Of Gaba-Transaminase A1r958 From Arthroba		3e-20
3q8n_A	453	Crystal Structure Of 4-Aminobutyrate Transaminase F		1e-19
3l44_A	434	Crystal Structure Of Bacillus Anthracis Heml-1, Glu		4e-18
3fqa_A	427	Gabaculien Complex Of Gabaculine Resistant Gsam Ver		5e-16
2cfb_A	411	Glutamate-1-Semialdehyde 2,1-Aminomutase From Therm		7e-16
3fq8_A	427	M248i Mutant Of Gsam Length = 427		8e-16
2gsa_A	432	Crystal Structure Of Glutamate-1-Semialdehyde Amino		1e-15
3fq7_A	427	Gabaculine Complex Of Gsam Length = 427		2e-15
2hoy_A	432	Inter-Subunit Signaling In Gsam Length = 432		2e-15
3dxw_A	452	The Crystal Structure Of Alpha-Amino-Epsilon-Caprol		5e-15
2zuk_A	439	The Crystal Structure Of Alpha-Amino-Epsilon-Caprol		6e-15
2epj_A	434	Crystal Structure Of Glutamate-1-Semialdehyde 2,1-A		2e-14
3bs8_A	438	Crystal Structure Of Glutamate 1-Semialdehyde Amino		3e-14
2e7u_A	424	Crystal Structure Of Glutamate-1-Semialdehyde 2,1-A		4e-14
4e77_A	429	2.0a Crystal Structure Of A Glutamate-1-Semialdehyd		9e-14
3k28_A	429	Crystal Structure Of A Glutamate-1-Semialdehyde Ami		1e-12
2cy8_A	453	Crystal Structure Of D-Phenylglycine Aminotransfera		1e-11
4a0g_A	831	Structure Of Bifunctional Dapa Aminotransferase-Dtb		3e-11
2jjh_A	449	E243 Mutant Of M. Tuberculosis Rv3290c Length = 449		1e-10
4a0f_A	831	Structure Of Selenomethionine Substituted Bifunctio		1e-10
2jjf_A	449	N328a Mutant Of M. Tuberculosis Rv3290c Length = 44		1e-10
2cin_A	449	Lysine Aminotransferase From M. Tuberculosis In The		2e-10
2jje_A	449	Crystal Structure Of T330s Mutant Of Rv3290c From M		4e-10
1ohv_A	472	4-aminobutyrate-aminotransferase From Pig Length =		4e-09
4ao9_A	454	Biochemical Properties And Crystal Structure Of A N		3e-06
2yku_A	465	Structural Determinants Of The Beta-Selectivity Of		8e-06

>pdb|3NUI|A Chain A, Crystal Structure Of Omega-Transferase From Vibrio Fluvialis Js17 Length = 478

Iteration: 1
 Score =  350 bits (897), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 162/417 (38%), Positives = 252/417 (60%), Gaps = 2/417 (0%)
Query: 84  LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTT 143
           +V+   EG Y+ DVNG++YLD+ +GLW    G     L+ AA AQ    P YH+F+ R +
Sbjct: 45  VVVTHGEGPYIVDVNGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFPGYHAFFGRMS 104
Query: 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKS 203
             ++ L+++L+E+ +     +VF+TNSGSEANDT VK++W+ + A G+P K+K + R  +
Sbjct: 105 DQTVMLSEKLVEV-SPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNA 163
Query: 204 YHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDL 263
           YHG T ++AS++G P  +  F LP P  +H  CPHYWRY   GETEE++  RLA  LE+ 
Sbjct: 164 YHGVTAVSASMTGKP-YNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEET 222
Query: 264 ILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGRLGTM 323
           I +EG +TIA F AE              YF+ +  +++KYDI  I+DEVIC FGR G  
Sbjct: 223 IQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNT 282
Query: 324 FGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPV 383
           +GC  Y   PD +  +K L++ + P+GA+++ PE+S+ + +    +  F HGFT SGHPV
Sbjct: 283 WGCVTYDFTPDAIISSKNLTAGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGHPV 342
Query: 384 SCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKS 443
            CA+A++A+ +     + E V ++AP+F++ +K  ++ P IGE RG G +   E   +K+
Sbjct: 343 GCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIAERPNIGEYRGIGFMWALEAVKDKA 402
Query: 444 PNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKAL 500
              PF     +       C   G++ R  G ++++ PPFI++  ++DE+  K  KAL
Sbjct: 403 SKTPFDGNLSVSERIANTCTDLGLICRPLGQSVVLCPPFILTEAQMDEMFDKLEKAL 459

>pdb|4GRX|A Chain A, Structure Of An Omega-Aminotransferase From Paracoccus Denitrificans Length = 465

Iteration: 1
 Score =  348 bits (893), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 161/417 (38%), Positives = 250/417 (59%), Gaps = 2/417 (0%)
Query: 84  LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTT 143
           +V+   EG Y+ DV+G++YLD+ +GLW    G     L+ AA AQ +  P YH+F+ R +
Sbjct: 43  VVVTHGEGPYIVDVHGRRYLDANSGLWNMVAGFDHKGLIEAAKAQYDRFPGYHAFFGRMS 102
Query: 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKS 203
             ++ L+++L+E+ +     +VF+TNSGSEANDT VK++W+ + A G+P K+K + R  +
Sbjct: 103 DQTVMLSEKLVEV-SPFDNGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNA 161
Query: 204 YHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDL 263
           YHG T ++AS++G P  +  F LP P  +H  CPHYWRY   GETE ++  RLA  LED 
Sbjct: 162 YHGVTAVSASMTGKP-YNSVFGLPLPGFIHLTCPHYWRYGEEGETEAQFVARLARELEDT 220
Query: 264 ILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGRLGTM 323
           I +EG +TIA F AE              YF+ +  +++KYDI  I+DEVIC FGR G  
Sbjct: 221 ITREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPMISDEVICGFGRTGNT 280
Query: 324 FGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPV 383
           +GC  Y   PD +  +  L++ + P+GA+++ P++++ + +    +  F HGFT SGHPV
Sbjct: 281 WGCLTYDFMPDAIISSXNLTAGFFPMGAVILGPDLAKRVEAAVEAIEEFPHGFTASGHPV 340
Query: 384 SCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKS 443
            CA+A++A+ +     + E V ++AP+F+ G+K  +D P IGE RG G +   E   +K 
Sbjct: 341 GCAIALKAIDVVMNEGLAENVRRLAPRFEAGLKRIADRPNIGEYRGIGFMWALEAVKDKP 400
Query: 444 PNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKAL 500
              PF     +       C   G++ R  G +I++ PPFI++  ++DE+  K  KAL
Sbjct: 401 TKTPFDANLSVSERIANTCTDLGLICRPLGQSIVLCPPFILTEAQMDEMFEKLEKAL 457

>pdb|4E3Q|A Chain A, Pmp-Bound Form Of Aminotransferase Crystal Structure From Vibrio Fluvialis Length = 473

Iteration: 1
 Score =  343 bits (879), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 163/417 (39%), Positives = 247/417 (59%), Gaps = 2/417 (0%)
Query: 84  LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTT 143
           +V+   EG Y+ DVNG++YLD+ +GLW    G     L+ AA AQ    P YH+F+ R +
Sbjct: 51  VVVTHGEGPYIVDVNGRRYLDANSGLWNXVAGFDHKGLIDAAKAQYERFPGYHAFFGRXS 110
Query: 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKS 203
             ++ L+++L+E+ +     +VF+TNSGSEANDT VK +W+ + A G+P K+K + R  +
Sbjct: 111 DQTVXLSEKLVEV-SPFDSGRVFYTNSGSEANDTXVKXLWFLHAAEGKPQKRKILTRWNA 169
Query: 204 YHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDL 263
           YHG T ++AS +G P  +  F LP P  +H  CPHYWRY   GETEE++  RLA  LE+ 
Sbjct: 170 YHGVTAVSASXTGKP-YNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEET 228
Query: 264 ILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGRLGTM 323
           I +EG +TIA F AE              YF+ +  +++KYDI  I+DEVIC FGR G  
Sbjct: 229 IQREGADTIAGFFAEPVXGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNT 288
Query: 324 FGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPV 383
           +GC  Y   PD +  +K L++ + P GA+++ PE+S+ + +    +  F HGFT SGHPV
Sbjct: 289 WGCVTYDFTPDAIISSKNLTAGFFPXGAVILGPELSKRLETAIEAIEEFPHGFTASGHPV 348
Query: 384 SCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKS 443
            CA+A++A+ +     + E V ++AP+F++ +K  ++ P IGE RG G     E   +K+
Sbjct: 349 GCAIALKAIDVVXNEGLAENVRRLAPRFEERLKHIAERPNIGEYRGIGFXWALEAVKDKA 408
Query: 444 PNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKAL 500
              PF     +       C   G++ R  G ++++ PPFI++  + DE   K  KAL
Sbjct: 409 SKTPFDGNLSVSERIANTCTDLGLICRPLGQSVVLCPPFILTEAQXDEXFDKLEKAL 465

>pdb|4E3R|A Chain A, Plp-Bound Aminotransferase Mutant Crystal Structure From Vibrio Fluvialis Length = 473

Iteration: 1
 Score =  336 bits (861), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 156/417 (37%), Positives = 250/417 (59%), Gaps = 2/417 (0%)
Query: 84  LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTT 143
           +V+   EG Y+ DVNG++YLD+ +GL+    G     L+ AA AQ    P YH+ + + +
Sbjct: 51  VVVTHGEGPYIVDVNGRRYLDANSGLFNMVAGFDHKGLIDAAKAQYERFPGYHAAFGKMS 110
Query: 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKS 203
             ++ L+++L+E+ +     +VF+TNSGSEANDT VK++W+ + A G+P K+K + R  +
Sbjct: 111 DQTVMLSEKLVEV-SPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNA 169
Query: 204 YHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDL 263
           YHG+T ++AS++G P  +  F LP P  +H  CPHYWRY   GETEE++  RLA  LE+ 
Sbjct: 170 YHGATAVSASMTGFP-YNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEET 228
Query: 264 ILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGRLGTM 323
           I +EG +TIA F AE              YF+ +  +++KYDI  I+DEV+C FGR G  
Sbjct: 229 IQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVVCGFGRTGNT 288
Query: 324 FGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPV 383
           +GC  Y   PD +  +  L++ + P+GA+++ PE+S+ + +    +  F HGFT SGHPV
Sbjct: 289 WGCVTYDFTPDAIISSXNLTAGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGHPV 348
Query: 384 SCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKS 443
            CA+A++A+ +     + E V ++AP+F++ +K  ++ P IGE RG G +   E   +K+
Sbjct: 349 GCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHIAERPNIGEYRGIGFMWALEAVKDKA 408
Query: 444 PNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKAL 500
              PF     +       C   G++    G ++++ PPFI++  ++DE+  K  KAL
Sbjct: 409 SKTPFDGNLSVSERIANTCTDLGLICFPLGQSVVLCPPFILTEAQMDEMFDKLEKAL 465

>pdb|3HMU|A Chain A, Crystal Structure Of A Class Iii Aminotransferase From Silicibacter Pomeroyi Length = 472

Iteration: 1
 Score =  302 bits (774), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 161/444 (36%), Positives = 255/444 (57%), Gaps = 12/444 (2%)
Query: 69  LAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ 128
           L PF+A     +    VI ++ G ++ D  G++ LD++AGLWC  +G     L   A  Q
Sbjct: 24  LHPFSANNALGEEGTRVITRARGVWLNDSEGEEILDAMAGLWCVNIGYGRDELAEVAARQ 83
Query: 129 LNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA 188
           +  LP+Y++F+  T  P++ LA++L E+     +  VFF   GSEANDT +++V  Y   
Sbjct: 84  MRELPYYNTFFKTTHVPAIALAQKLAEL-APGDLNHVFFAGGGSEANDTNIRMVRTYWQN 142
Query: 189 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET 248
            G+P K   I+R+ +YHGST+ +++L G+  +H +  L  P V H + P++W  A  G+ 
Sbjct: 143 KGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGL-IPDVHHINQPNWW--AEGGDM 199
Query: 249 E-EEYSTRLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDIL 307
           + EE+    A  LE+ IL+ G   +AAFIAE             +Y+ ++Q +  KYDIL
Sbjct: 200 DPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDIL 259
Query: 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN 367
            IADEVIC FGR G  FG     I+P +++ AK LSS Y PIG  +V  EV+ VI     
Sbjct: 260 LIADEVICGFGRTGNWFGTQTMGIRPHIMTIAKGLSSGYAPIGGSIVCDEVAHVIGKD-- 317
Query: 368 TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKI-APKFQDGVKAFSDSPIIGE 426
               F+HG+TYSGHPV+ AVA+E L+I +E NI++ V  + AP  ++  +A +D P++GE
Sbjct: 318 ---EFNHGYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALTDHPLVGE 374
Query: 427 IRGTGLILGTEFADNKSPNEPFPPEWG-IGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMS 485
            +  G++       NK+    F  E G IG     +C  + +++R  GD +++SPP +++
Sbjct: 375 AKIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVGDRMIISPPLVIT 434
Query: 486 PEEVDELISKYGKALKATEERVKE 509
           P E+DE+  +  K+L   +  +++
Sbjct: 435 PAEIDEMFVRIRKSLDEAQAEIEK 458

>pdb|4A6R|A Chain A, Crystal Structure Of The Omega Transaminase From Chromobacterium Violaceum In The Apo Form, Crystallised From Polyacrylic Acid Length = 459

Iteration: 1
 Score =  290 bits (741), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 162/443 (36%), Positives = 247/443 (55%), Gaps = 10/443 (2%)
Query: 69  LAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQ 128
           L PFT           V+ + EG Y++D  G K +D +AGLWC  +G        AA  Q
Sbjct: 19  LHPFTDTASLNQAGARVMTRGEGVYLWDSEGNKIIDGMAGLWCVNVGYGRKDFAEAARRQ 78
Query: 129 LNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA 188
           +  LPFY++F+ +TT P++     LL   T +   +VF+TNSGSE+ DT +++V  Y + 
Sbjct: 79  MEELPFYNTFF-KTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDV 137
Query: 189 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGE- 247
            G+P KK  I R   YHGST+  ASL G+  +H++ DLP P + H + P  W Y H  + 
Sbjct: 138 QGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQP--WWYKHGKDM 195
Query: 248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDIL 307
           T +E+    A  LE+ IL+ G + +AAF+ E             TY+ +++ + +KYD+L
Sbjct: 196 TPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVL 255
Query: 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN 367
            +ADEVIC FGR G  FG   +  +PDL + AK LSS Y+PIGA+ V   V+E + +   
Sbjct: 256 LVADEVICGFGRTGEWFGHQHFGFQPDLFTAAKGLSSGYLPIGAVFVGKRVAEGLIAG-- 313
Query: 368 TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV-NKIAPKFQDGVK-AFSDSPIIG 425
             G F+HGFTYSGHPV  AVA   +   ++  IV++V + I P  Q   +  FS    + 
Sbjct: 314 --GDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVD 371
Query: 426 EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMS 485
           ++RG G++       NK+  E FP    IG        ++ +++R  GD+I+ +PP +M+
Sbjct: 372 DVRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACGDHIVSAPPLVMT 431
Query: 486 PEEVDELISKYGKALKATEERVK 508
             EVDE+++   + L+  E+ +K
Sbjct: 432 RAEVDEMLAVAERCLEEFEQTLK 454

>pdb|3I5T|A Chain A, Crystal Structure Of Aminotransferase Prk07036 From Rhodobacter Sphaeroides Kd131 Length = 476

Iteration: 1
 Score =  242 bits (618), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 137/423 (32%), Positives = 225/423 (53%), Gaps = 17/423 (4%)
Query: 85  VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK 144
           V+  +EG YV+  +G++ +D  AG+WC  +G     +V A   Q   LP Y S W   T 
Sbjct: 39  VLTHAEGIYVHTEDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLP-YASPWYMATS 97
Query: 145 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSY 204
           P+  LA E +   T   + ++FFT  GS A D+ ++   +YNN LGRP KK+ I R   Y
Sbjct: 98  PAARLA-EKIATLTPGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGY 156
Query: 205 HGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLI 264
           HGST + A+ +G       FD+    +     P+  R+A    ++E +   L    ED I
Sbjct: 157 HGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNP-RHAG-NRSQEAFLDDLVQEFEDRI 214
Query: 265 LKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGRLGTMF 324
              GP+TIAAF+AE              Y  + +A+ +K+DIL+I+DEV+  FGR G  F
Sbjct: 215 ESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWF 274
Query: 325 GCDK-YSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPV 383
             +K + + PD+++FAK ++S Y+P+G + +S  V   I  ++     F++G+TYS  PV
Sbjct: 275 ASEKVFGVVPDIITFAKGVTSGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPV 334
Query: 384 SCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI------LGTE 437
           +CA A+  +++ +   IV+Q  ++A  F   + +  D P + E R  GL+      L   
Sbjct: 335 ACAAALANIELMEREGIVDQAREMADYFAAALASLRDLPGVAETRSVGLVGCVQCLLDPT 394
Query: 438 FADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYG 497
            AD  + ++ F  +         +C + G++VR  GD  ++SPP I+S  ++DE+++   
Sbjct: 395 RADGTAEDKAFTLK------IDERCFELGLIVRPLGDLCVISPPLIISRAQIDEMVAIMR 448
Query: 498 KAL 500
           +A+
Sbjct: 449 QAI 451

>pdb|3DU4|A Chain A, Crystal Structure Of 7-Keto-8-Aminopelargonic Acid Bound 7,8- Diaminopelargonic Acid Synthase In Bacillus Subtilis Length = 448

Iteration: 1
 Score =  230 bits (587), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 221/439 (50%), Gaps = 23/439 (5%)
Query: 71  PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 130
           PFT   +  D +PL+IE   G  V D+NGK+Y D  + +W    G  +  L  A   QL 
Sbjct: 16  PFTQ-MKDYDENPLIIESGTGIKVKDINGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLG 74
Query: 131 TLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG 190
            +  + +    T  P+  LA+ L+++ +  K+ +VF+++SG+EA +  +K+ + Y   +G
Sbjct: 75  KIA-HSTLLGMTNVPATQLAETLIDI-SPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIG 132
Query: 191 RPNKKKFIARQKSYHGSTLIAASLSGL--------PALHQKFDLPAPFVLHTDCPHYWRY 242
           +P K+KFIA +  YHG T+ A S+  +        P + + +  P P+V  ++       
Sbjct: 133 KPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSES------ 186
Query: 243 AHPGETEEEYSTRLANNLEDLILKEGPETIAAF-IAEXXXXXXXXXXXXXTYFEKVQAVV 301
             P E  ++    LA      +L+E  E IAA  I                Y   V+ + 
Sbjct: 187 GDPDECRDQXLRELAQ-----LLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELC 241
Query: 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEV 361
             YD+L I DEV   FGR G MF C+  +++PDL++  K ++  Y+PI     + ++ + 
Sbjct: 242 TTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAGKGITGGYLPIAVTFATEDIYKA 301
Query: 362 IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS 421
            +     L +F HG +Y+G+ + CAVA+E L +++  NIVEQV + + K    ++     
Sbjct: 302 FYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHAL 361
Query: 422 PIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPP 481
           P +G+IR  G + G E   +K   EP+P +  IG     +  + GML R  GD I   PP
Sbjct: 362 PHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLGDVIAFLPP 421
Query: 482 FIMSPEEVDELISKYGKAL 500
              + EE+ E+++   +A+
Sbjct: 422 LASTAEELSEMVAIMKQAI 440

>pdb|3DOD|A Chain A, Crystal Structure Of Plp Bound 7,8-diaminopelargonic Acid Synthase In Bacillus Subtilis Length = 448

Iteration: 1
 Score =  230 bits (587), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/439 (30%), Positives = 221/439 (50%), Gaps = 23/439 (5%)
Query: 71  PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 130
           PFT   +  D +PL+IE   G  V D+NGK+Y D  + +W    G  +  L  A   QL 
Sbjct: 16  PFTQ-MKDYDENPLIIESGTGIKVKDINGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLG 74
Query: 131 TLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG 190
            +  + +    T  P+  LA+ L+++ +  K+ +VF+++SG+EA +  +K+ + Y   +G
Sbjct: 75  KIA-HSTLLGMTNVPATQLAETLIDI-SPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIG 132
Query: 191 RPNKKKFIARQKSYHGSTLIAASLSGL--------PALHQKFDLPAPFVLHTDCPHYWRY 242
           +P K+KFIA +  YHG T+ A S+  +        P + + +  P P+V  ++       
Sbjct: 133 KPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSES------ 186
Query: 243 AHPGETEEEYSTRLANNLEDLILKEGPETIAAF-IAEXXXXXXXXXXXXXTYFEKVQAVV 301
             P E  ++    LA      +L+E  E IAA  I                Y   V+ + 
Sbjct: 187 GDPDECRDQCLRELAQ-----LLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELC 241
Query: 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEV 361
             YD+L I DEV   FGR G MF C+  +++PDL++  K ++  Y+PI     + ++ + 
Sbjct: 242 TTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAGKGITGGYLPIAVTFATEDIYKA 301
Query: 362 IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS 421
            +     L +F HG +Y+G+ + CAVA+E L +++  NIVEQV + + K    ++     
Sbjct: 302 FYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHAL 361
Query: 422 PIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPP 481
           P +G+IR  G + G E   +K   EP+P +  IG     +  + GML R  GD I   PP
Sbjct: 362 PHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLGDVIAFLPP 421
Query: 482 FIMSPEEVDELISKYGKAL 500
              + EE+ E+++   +A+
Sbjct: 422 LASTAEELSEMVAIMKQAI 440

>pdb|3N5M|A Chain A, Crystals Structure Of A Bacillus Anthracis Aminotransferase Length = 452

Iteration: 1
 Score =  226 bits (577), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/429 (32%), Positives = 228/429 (53%), Gaps = 22/429 (5%)
Query: 88  KSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 147
           K+EG +V D+ GK+YLD  +GLWC   G     L  AA  QL TL ++    +++ +P++
Sbjct: 37  KAEGCWVEDIQGKRYLDGXSGLWCVNSGYGRKELAEAAYKQLQTLSYFPX--SQSHEPAI 94
Query: 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGS 207
            LA++L E      +  +FF+NSGSEAN+T  K+   Y    G P++ KF +R + YHG+
Sbjct: 95  KLAEKLNEWLGGEYV--IFFSNSGSEANETAFKIARQYYAQKGEPHRYKFXSRYRGYHGN 152
Query: 208 TLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPG-ETEEEYSTRLANNLEDLILK 266
           T    + +G      +++  A   LH   P  +R   PG E E  Y       ++ +   
Sbjct: 153 TXATXAATGQAQRRYQYEPFASGFLHVTPPDCYR--XPGIERENIYDVECVKEVDRVXTW 210
Query: 267 EGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC 326
           E  ETIAAFI E              Y + V    +K+  L I+DEVIC FGR G  FG 
Sbjct: 211 ELSETIAAFIXEPIITGGGILXAPQDYXKAVHETCQKHGALLISDEVICGFGRTGKAFGF 270
Query: 327 DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 386
             Y +KPD+++ AK ++SAY+P+ A  V  E+ E    +      F H  T+ G+P +CA
Sbjct: 271 XNYDVKPDIITXAKGITSAYLPLSATAVKREIYEAFKGKGE-YEFFRHINTFGGNPAACA 329
Query: 387 VAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRGTGLILGTEFADNKSPN 445
           +A++ L+I +  N++E+  +      + +K    + P++G+IRG GL++G E  ++K   
Sbjct: 330 LALKNLEIIENENLIERSAQXGSLLLEQLKEEIGEHPLVGDIRGKGLLVGIELVNDKETK 389
Query: 446 EPFPPEWGIGAYFGAQCEKHGMLVRVSG------DNIM-MSPPFIMSPEEVDELISKYGK 498
           EP   +  I +   A C++ G+++  +G      +NI+ ++PP ++S EE+  +I     
Sbjct: 390 EPIDND-KIASVVNA-CKEKGLIIGRNGXTTAGYNNILTLAPPLVISSEEIAFVIG---- 443
Query: 499 ALKATEERV 507
            LK   ER+
Sbjct: 444 TLKTAXERI 452

>pdb|3A8U|X Chain X, Crystal Structure Of Omega-Amino Acid:pyruvate Aminotransferase Length = 449

Iteration: 1
 Score =  197 bits (500), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 203/422 (48%), Gaps = 12/422 (2%)
Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           P +I  +EGS++ D  G+K  DSL+GLW    G +   +  A   QL+TL +   F  + 
Sbjct: 33  PRLIVAAEGSWLVDDKGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLDYSPGF--QY 90
Query: 143 TKP-SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
             P S  LA+++ ++ T   +  VFFT+SGSE   T VK+V  Y    G+  K K I R 
Sbjct: 91  GHPLSFQLAEKITDL-TPGNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRA 149
Query: 202 KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE 261
           + YHG  +   SL G+    + F  P   V H         A+     +E    LA+ L 
Sbjct: 150 RGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELL 209
Query: 262 DLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGRLG 321
            LI       IAA   E              Y ++ + +  +++IL + DEVI  FGR G
Sbjct: 210 KLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTG 269
Query: 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT--LGSFSHGFTYS 379
           +MFG D + + PDL+  AK +++  +P+GA++ S E+ +   +Q        F HG+TYS
Sbjct: 270 SMFGADSFGVTPDLMCIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYS 329
Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFA 439
            HPV+CA  + AL + ++ N+V+ V ++AP F+  +     +  + +IR  GL    + A
Sbjct: 330 AHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIA 389
Query: 440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKA 499
                    P E G+  +      K G  VR  GD +   P F   P+++D L    G+ 
Sbjct: 390 PRDGDAIVRPFEAGMALW------KAGFYVRFGGDTLQFGPTFNSKPQDLDRLFDAVGEV 443
Query: 500 LK 501
           L 
Sbjct: 444 LN 445

>pdb|3I4J|A Chain A, Crystal Structure Of Aminotransferase, Class Iii From Deinococcus Radiodurans Length = 430

Iteration: 1
 Score =  172 bits (435), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 207/429 (48%), Gaps = 33/429 (7%)
Query: 76  WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY 135
           ++S+  +P+ + + EG ++YD  G++YLD  +G     +G     +     AQ   LPF 
Sbjct: 6   YRSSKPYPVAV-RGEGVFLYDDAGRRYLDGSSGALVANIGHGRAEVGERMAAQAARLPFV 64
Query: 136 HSFWNRTTKPSLDLAKEL---LEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRP 192
           H      ++ S D+ +E    L  F      + +  + GSEA ++ VKL   Y+   G P
Sbjct: 65  HG-----SQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQYHVERGEP 119
Query: 193 NKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 252
            + K I R  SYHG++L + + SG+ A   + +L  P +     P  W    P       
Sbjct: 120 GRFKVITRVPSYHGASLGSLAASGMGA---RRELYTPLMR----PEAWPKL-PKPDPARN 171
Query: 253 STRLANNLEDLILKEGPETIAAFIAE-XXXXXXXXXXXXXTYFEKVQAVVKKYDILFIAD 311
               A  L  L+ +EGPET+AAF+AE               Y+E+V+ +  +  I+FIAD
Sbjct: 172 GAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIAD 231
Query: 312 EVICAFGRLGTMFGCDKYS-IKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG 370
           EV+   GR G+     ++S + PD+    K L++ Y P+  +L +P+V E +   S   G
Sbjct: 232 EVMSGMGRCGSPLALSRWSGVTPDIAVLGKGLAAGYAPLAGLLAAPQVYETVMGGS---G 288
Query: 371 SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRG 429
           +F HGFTY+GHPVS A  +  L I +  ++     +   +   G++A     P + ++RG
Sbjct: 289 AFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQVRG 348
Query: 430 TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV--------RVSGDNIMMSPP 481
           TGL+LG    D  +      P  GI +  GA   K G++            GD++++ PP
Sbjct: 349 TGLLLGVVLGDLATGQAFETP--GIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPP 406
Query: 482 FIMSPEEVD 490
             ++  EVD
Sbjct: 407 LSITAAEVD 415

>pdb|2EO5|A Chain A, Crystal Structure Of 4-Aminobutyrate Aminotransferase From Sulfolobus Tokodaii Strain7 Length = 419

Iteration: 1
 Score =  166 bits (421), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 208/438 (47%), Gaps = 47/438 (10%)
Query: 77  QSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALG-GSEPRLVAAATAQLNTLPFY 135
           +  ++ PLVI+  EG ++YDV+G KYLD  +G+    LG  S P ++     Q+  L   
Sbjct: 19  RDPELFPLVIDHGEGVWIYDVDGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAHA 78
Query: 136 --HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPN 193
             + F+N    P L+LAK+L+     +   KVFF+NSG+EA +  +K+V           
Sbjct: 79  AANDFYN---IPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVV-------KNTG 128
Query: 194 KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP-APFVLHTDCPHYWR---YAHPGETE 249
           +K  IA    +HG T  + SL+   A+ +    P  P V+H   P+ +R   + +  E  
Sbjct: 129 RKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENP 188
Query: 250 EEYSTRLANNLEDLILKE--GPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDIL 307
            E   R+   +ED I      PE +A    E              +F ++Q + KKY IL
Sbjct: 189 SELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGIL 248
Query: 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN 367
            + DEV    GR G +F  + ++  PD+++ AKAL    MPIGA +   ++       SN
Sbjct: 249 LVDDEVQMGLGRTGKLFAIENFNTVPDVITLAKALGGGIMPIGATIFRKDLDFKPGMHSN 308
Query: 368 TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI 427
           T G         G+ ++CA+  + + I K+  ++  VN+I   F + ++  +D     ++
Sbjct: 309 TFG---------GNALACAIGSKVIDIVKD--LLPHVNEIGKIFAEELQGLAD-----DV 352
Query: 428 RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSP 486
           RG GL  G E+ + K  +        IG  F     K G+L+  +G + I + PP ++S 
Sbjct: 353 RGIGLAWGLEYNEKKVRDRI------IGESF-----KRGLLLLPAGRSAIRVIPPLVISE 401
Query: 487 EEVDELISKYGKALKATE 504
           EE  + +    K +K  +
Sbjct: 402 EEAKQGLDILKKVIKVVK 419

>pdb|3LG0|A Chain A, Structure Of Plasmodium Falciparum Ornithine Delta-Aminotransferase Length = 422

Iteration: 1
 Score =  159 bits (403), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 196/435 (45%), Gaps = 49/435 (11%)
Query: 72  FTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNT 131
            T G  + D  P+V+++ +G +VYD+  ++Y D L+       G   P ++ A   Q   
Sbjct: 18  LTYGAHNYDPIPVVLKRGKGVFVYDIEDRRYYDFLSAYSSVNQGHCHPDILNAMINQAKK 77
Query: 132 LPFY-HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNA 188
           L     +F++     SL + +  L         KV   N+G+EA++T  KL   W Y   
Sbjct: 78  LTICSRAFFSD----SLGVCERYLTNLFGYD--KVLMMNTGAEASETAYKLCRKWGYEVK 131
Query: 189 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET 248
               N  K I    ++ G TL   S S        F    PFV     P++ +  +    
Sbjct: 132 KIPENSAKIIVCNNNFSGRTLGCVSASTDKKCKNNF---GPFV-----PNFLKVPY---- 179
Query: 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILF 308
                    ++LE L  +     + AFI E             +YF  V ++ KKY++LF
Sbjct: 180 ---------DDLEALEKELQDPNVCAFIVEPVQGEAGVIVPSDSYFPGVASLCKKYNVLF 230
Query: 309 IADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT 368
           +ADEV    GR G +     Y +KPD++   KALS  + PI AIL + +V  V+      
Sbjct: 231 VADEVQTGLGRTGKLLCTHHYGVKPDVILLGKALSGGHYPISAILANDDVMLVLKPG--- 287
Query: 369 LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKI-APKFQDGVKAFSDSPIIGEI 427
                HG TY G+P++ A+ +EALK+     + E  +K+ AP  Q+  +   DS ++ E+
Sbjct: 288 ----EHGSTYGGNPLAAAICVEALKVLINEKLCENADKLGAPFLQNLKEQLKDSKVVREV 343
Query: 428 RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VSGDNIMMSPPFIMSP 486
           RG GL+   EF ++          W I   F    +++G++ R V    + ++PP  ++ 
Sbjct: 344 RGKGLLCAIEFKND------LVNVWDICLKF----KENGLITRSVHDKTVRLTPPLCITK 393
Query: 487 EEVDELISKYGKALK 501
           E++DE      K +K
Sbjct: 394 EQLDECTEIIVKTVK 408

>pdb|2E54|A Chain A, Crystal Structure Of Acetylornithine Aminotransferase From Thermotoga Maritima Length = 385

Iteration: 1
 Score =  158 bits (399), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 197/426 (46%), Gaps = 58/426 (13%)
Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS-FWNR 141
           P      +GS++YD  G  YLD  +G+    LG S PRLV A   Q   L    + FWNR
Sbjct: 11  PATFVYGKGSWIYDEKGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIHCSNLFWNR 70
Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
              P ++LA ELL   T     KVFF N+G+EAN+  +K+   Y        K + ++  
Sbjct: 71  ---PQMELA-ELLSKNTFG--GKVFFANTGTEANEAAIKIARKYGKKK-SEKKYRILSAH 123
Query: 202 KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE 261
            S+HG TL + + +G P   + F+   P V             PG    E+     NN+E
Sbjct: 124 NSFHGRTLGSLTATGQPKYQKPFE---PLV-------------PGFEYFEF-----NNVE 162
Query: 262 DLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGRLG 321
           DL  K   +  A F+ E              + E+ + +  +YD L + DEV C  GR G
Sbjct: 163 DLRRKMSEDVCAVFL-EPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTG 221
Query: 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 381
            +F   KY + PD+++ AK L    +PIGA++V        + ++N L    HG T+ G+
Sbjct: 222 KLFAYQKYGVVPDVLTTAKGLGGG-VPIGAVIV--------NERANVLEPGDHGTTFGGN 272
Query: 382 PVSCAVAIEALKIYKERNIVEQV----NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTE 437
           P++C   +  +K   +   +E+V    N +  K Q+  + +    ++ ++RG GL++G +
Sbjct: 273 PLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEMKEEYD---VVADVRGMGLMIGIQ 329
Query: 438 FADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELISKY 496
           F +  S  E              +C ++ +LV  +G+N I   PP  +   E+D  +   
Sbjct: 330 FREEVSNRE-----------VATKCFENKLLVVPAGNNTIRFLPPLTVEYGEIDLAVETL 378
Query: 497 GKALKA 502
            K L+ 
Sbjct: 379 KKVLQG 384

>pdb|1D7R|A Chain A, Crystal Structure Of The Complex Of 2,2-Dialkylglycine Decarboxylase With 5pa Length = 433

Iteration: 1
 Score =  156 bits (395), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 197/433 (45%), Gaps = 40/433 (9%)
Query: 82  HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNR 141
            P++IE+++GS+VYD +G+  LD  +G     LG   P +V+        L   H F   
Sbjct: 25  EPMIIERAKGSFVYDADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLD--HLFSGM 82
Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
            ++P +DLA  L  + T   + +    ++G+E+N+  +++            K + +   
Sbjct: 83  LSRPVVDLATRLANI-TPPGLDRALLLSTGAESNEAAIRMAKLVTG------KYEIVGFA 135
Query: 202 KSYHGSTLIAASLS------GL-PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254
           +S+HG T  AAS +      G+ PA    F +PAPF           Y +  E +  +  
Sbjct: 136 QSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAF-- 193
Query: 255 RLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVI 314
                  DLI ++    +AAFIAE              Y   ++   +   +L I DE  
Sbjct: 194 -------DLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQ 246
Query: 315 CAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSH 374
              GR GTMF C +  + PD+++ +K L  A +P+ AI+ S  + E  H     LG   +
Sbjct: 247 TGVGRTGTMFACQRDGVTPDILTLSKTL-GAGLPLAAIVTSAAIEERAHE----LGYLFY 301
Query: 375 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLI 433
             T+   P+  AV +  L + +   +V + N +  + + G+    +    IG++RG GL+
Sbjct: 302 -TTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLL 360
Query: 434 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV-----SGDNIMMSPPFIMSPEE 488
           LG E   ++   EP     G+GA    +C   G+ + +      G    ++PP  +S +E
Sbjct: 361 LGVEIVKDRRTKEPAD---GLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDE 417
Query: 489 VDELISKYGKALK 501
           +D  +S  G+A++
Sbjct: 418 IDLGLSLLGQAIE 430

>pdb|1Z3Z|A Chain A, The Crystal Structure Of A Dgd Mutant: Q52a Length = 431

Iteration: 1
 Score =  156 bits (395), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 197/433 (45%), Gaps = 40/433 (9%)
Query: 82  HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNR 141
            P++IE+++GS+VYD +G+  LD  +G     LG   P +V+        L   H F   
Sbjct: 23  EPMIIERAKGSFVYDADGRAILDFTSGAMSAVLGHCHPEIVSVIGEYAGKLD--HLFSEM 80
Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
            ++P +DLA  L  + T   + +    ++G+E+N+  +++            K + +   
Sbjct: 81  LSRPVVDLATRLANI-TPPGLDRALLLSTGAESNEAAIRMAKLVTG------KYEIVGFA 133
Query: 202 KSYHGSTLIAASLS------GL-PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254
           +S+HG T  AAS +      G+ PA    F +PAPF           Y +  E +  +  
Sbjct: 134 QSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAF-- 191
Query: 255 RLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVI 314
                  DLI ++    +AAFIAE              Y   ++   +   +L I DE  
Sbjct: 192 -------DLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQ 244
Query: 315 CAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSH 374
              GR GTMF C +  + PD+++ +K L  A +P+ AI+ S  + E  H     LG   +
Sbjct: 245 TGVGRTGTMFACQRDGVTPDILTLSKTL-GAGLPLAAIVTSAAIEERAHE----LGYLFY 299
Query: 375 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLI 433
             T+   P+  AV +  L + +   +V + N +  + + G+    +    IG++RG GL+
Sbjct: 300 -TTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLL 358
Query: 434 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV-----SGDNIMMSPPFIMSPEE 488
           LG E   ++   EP     G+GA    +C   G+ + +      G    ++PP  +S +E
Sbjct: 359 LGVEIVKDRRTKEPAD---GLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDE 415
Query: 489 VDELISKYGKALK 501
           +D  +S  G+A++
Sbjct: 416 IDLGLSLLGQAIE 428

>pdb|1DGD|A Chain A, An Alkali Metal Ion Size-Dependent Switch In The Active Site Structure Of Dialkylglycine Decarboxylase Length = 432

Iteration: 1
 Score =  156 bits (394), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 197/433 (45%), Gaps = 40/433 (9%)
Query: 82  HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNR 141
            P++IE+++GS+VYD +G+  LD  +G     LG   P +V+        L   H F   
Sbjct: 24  EPMIIERAKGSFVYDADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLD--HLFSGM 81
Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
            ++P +DLA  L  + T   + +    ++G+E+N+  +++            K + +   
Sbjct: 82  LSRPVVDLATRLANI-TPPGLDRALLLSTGAESNEAAIRMAKLVTG------KYEIVGFA 134
Query: 202 KSYHGSTLIAASLS------GL-PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254
           +S+HG T  AAS +      G+ PA    F +PAPF           Y +  E +  +  
Sbjct: 135 QSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAF-- 192
Query: 255 RLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVI 314
                  DLI ++    +AAFIAE              Y   ++   +   +L I DE  
Sbjct: 193 -------DLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQ 245
Query: 315 CAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSH 374
              GR GTMF C +  + PD+++ +K L  A +P+ AI+ S  + E  H     LG   +
Sbjct: 246 TGVGRTGTMFACQRDGVTPDILTLSKTL-GAGLPLAAIVTSAAIEERAHE----LGYLFY 300
Query: 375 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLI 433
             T+   P+  AV +  L + +   +V + N +  + + G+    +    IG++RG GL+
Sbjct: 301 -TTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLL 359
Query: 434 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV-----SGDNIMMSPPFIMSPEE 488
           LG E   ++   EP     G+GA    +C   G+ + +      G    ++PP  +S +E
Sbjct: 360 LGVEIVKDRRTKEPAD---GLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDE 416
Query: 489 VDELISKYGKALK 501
           +D  +S  G+A++
Sbjct: 417 IDLGLSLLGQAIE 429

>pdb|2ORD|A Chain A, Crystal Structure Of Acetylornithine Aminotransferase (Ec 2.6.1.11) (Acoat) (Tm1785) From Thermotoga Maritima At 1.40 A Resolution Length = 397

Iteration: 1
 Score =  156 bits (394), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 195/426 (45%), Gaps = 58/426 (13%)
Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS-FWNR 141
           P      +GS++YD  G  YLD  +G+    LG S PRLV A   Q   L    + FWNR
Sbjct: 23  PATFVYGKGSWIYDEKGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIHCSNLFWNR 82
Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
              P  +LA ELL   T     KVFF N+G+EAN+  +K+   Y        K + ++  
Sbjct: 83  ---PQXELA-ELLSKNTFG--GKVFFANTGTEANEAAIKIARKYGKKK-SEKKYRILSAH 135
Query: 202 KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE 261
            S+HG TL + + +G P   + F+   P V             PG    E+     NN+E
Sbjct: 136 NSFHGRTLGSLTATGQPKYQKPFE---PLV-------------PGFEYFEF-----NNVE 174
Query: 262 DLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGRLG 321
           DL  K   +  A F+ E              + E+ + +  +YD L + DEV C  GR G
Sbjct: 175 DLRRKXSEDVCAVFL-EPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGXGRTG 233
Query: 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 381
            +F   KY + PD+++ AK L    +PIGA++V        + ++N L    HG T+ G+
Sbjct: 234 KLFAYQKYGVVPDVLTTAKGLGGG-VPIGAVIV--------NERANVLEPGDHGTTFGGN 284
Query: 382 PVSCAVAIEALKIYKERNIVEQV----NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTE 437
           P++C   +  +K   +   +E+V    N +  K Q+  + +    ++ ++RG GL +G +
Sbjct: 285 PLACRAGVTVIKELTKEGFLEEVEEKGNYLXKKLQEXKEEYD---VVADVRGXGLXIGIQ 341
Query: 438 FADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELISKY 496
           F +  S  E              +C ++ +LV  +G+N I   PP  +   E+D  +   
Sbjct: 342 FREEVSNRE-----------VATKCFENKLLVVPAGNNTIRFLPPLTVEYGEIDLAVETL 390
Query: 497 GKALKA 502
            K L+ 
Sbjct: 391 KKVLQG 396

>pdb|1M0N|A Chain A, Structure Of Dialkylglycine Decarboxylase Complexed With 1- Aminocyclopentanephosphonate Length = 433

Iteration: 1
 Score =  156 bits (394), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 197/433 (45%), Gaps = 40/433 (9%)
Query: 82  HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNR 141
            P++IE+++GS+VYD +G+  LD  +G     LG   P +V+        L   H F   
Sbjct: 25  EPMIIERAKGSFVYDADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLD--HLFSEM 82
Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
            ++P +DLA  L  + T   + +    ++G+E+N+  +++            K + +   
Sbjct: 83  LSRPVVDLATRLANI-TPPGLDRALLLSTGAESNEAAIRMAKLVTG------KYEIVGFA 135
Query: 202 KSYHGSTLIAASLS------GL-PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254
           +S+HG T  AAS +      G+ PA    F +PAPF           Y +  E +  +  
Sbjct: 136 QSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAF-- 193
Query: 255 RLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVI 314
                  DLI ++    +AAFIAE              Y   ++   +   +L I DE  
Sbjct: 194 -------DLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQ 246
Query: 315 CAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSH 374
              GR GTMF C +  + PD+++ +K L  A +P+ AI+ S  + E  H     LG   +
Sbjct: 247 TGVGRTGTMFACQRDGVTPDILTLSKTL-GAGLPLAAIVTSAAIEERAHE----LGYLFY 301
Query: 375 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLI 433
             T+   P+  AV +  L + +   +V + N +  + + G+    +    IG++RG GL+
Sbjct: 302 -TTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLL 360
Query: 434 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV-----SGDNIMMSPPFIMSPEE 488
           LG E   ++   EP     G+GA    +C   G+ + +      G    ++PP  +S +E
Sbjct: 361 LGVEIVKDRRTKEPAD---GLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDE 417
Query: 489 VDELISKYGKALK 501
           +D  +S  G+A++
Sbjct: 418 IDLGLSLLGQAIE 430

>pdb|2PB0|A Chain A, Structure Of Biosynthetic N-Acetylornithine Aminotransferase From Salmonella Typhimurium: Studies On Substrate Specificity And Inhibitor Binding Length = 420

Iteration: 1
 Score =  154 bits (389), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 192/416 (46%), Gaps = 48/416 (11%)
Query: 88  KSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL 147
           K +GS V+D  GK+Y+D   G+  TALG   P LV A  +Q  TL  +H+    T +P+L
Sbjct: 45  KGKGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVEALKSQGETL--WHTSNVFTNEPAL 102
Query: 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGS 207
            L ++L++   A+   +V F NSG+EAN+T  KL  +Y      P K K IA   ++HG 
Sbjct: 103 RLGRKLID---ATFAERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGR 159
Query: 208 TLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE 267
           +L   S+ G P     F      ++H                        N+L  +    
Sbjct: 160 SLFTVSVGGQPKYSDGFGPKPADIIHVPF---------------------NDLHAVKAVM 198
Query: 268 GPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCD 327
              T  A + E              + + ++ +  ++  L + DEV C  GR G +F   
Sbjct: 199 DDHT-CAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYM 257
Query: 328 KYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 387
            Y + PD+++ AKAL   + P+ A+L + E++   H         SHG TY G+P++CAV
Sbjct: 258 HYGVTPDILTSAKALGGGF-PVSAMLTTQEIASAFHVG-------SHGSTYGGNPLACAV 309
Query: 388 AIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFADN-KSPN 445
           A  A  I     +++ ++    +F   ++A  +   I  +IRG GL++G E     K   
Sbjct: 310 AGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKPKYKGRA 369
Query: 446 EPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYGKAL 500
             F        Y GA+    G++V  +G ++M  +P  ++   ++ E + ++ +A+
Sbjct: 370 RDF-------LYAGAEA---GVMVLNAGADVMRFAPSLVVEEADIHEGMQRFAQAV 415

>pdb|1Z7D|A Chain A, Ornithine Aminotransferase Py00104 From Plasmodium Yoelii Length = 433

Iteration: 1
 Score =  154 bits (389), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 192/438 (43%), Gaps = 51/438 (11%)
Query: 75  GWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF 134
           G  + D  P+V+++++G +VYDVN K+Y D L+       G   P ++ A   Q   L  
Sbjct: 40  GAHNYDPIPVVLKRAKGVFVYDVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTI 99
Query: 135 YHSFWNRTTKPSLDLAKELLEMFTASKMA--KVFFTNSGSEANDTQVKLV--WYYNNALG 190
                   ++    +   + E +  + +   KV   N+G+EAN+T  KL   W Y     
Sbjct: 100 -------CSRAFFSVPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCRKWGYEVKKI 152
Query: 191 RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 250
             N  K +  + ++ G TL   S S        F    PF      P + +  +      
Sbjct: 153 PENMAKIVVCKNNFSGRTLGCISASTTKKCTSNF---GPFA-----PQFSKVPY------ 198
Query: 251 EYSTRLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIA 310
                  ++LE L  +     + AFI E              Y + V  + KKY++LF+A
Sbjct: 199 -------DDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVA 251
Query: 311 DEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG 370
           DEV    GR G +     Y++KPD++   KALS  + PI A+L + ++  VI        
Sbjct: 252 DEVQTGLGRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKPG----- 306
Query: 371 SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFSDSPIIGEIRG 429
              HG TY G+P++ ++ +EAL +     + E   K+   F + +K    DS I+ ++RG
Sbjct: 307 --EHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRG 364
Query: 430 TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VSGDNIMMSPPFIMSPEE 488
            GL+   EF +          E         + +++G++ R V    I ++PP  ++ E+
Sbjct: 365 KGLLCAIEFKN----------ELVNVLDICLKLKENGLITRDVHDKTIRLTPPLCITKEQ 414
Query: 489 VDELISKYGKALKATEER 506
           +DE      K +K  +ER
Sbjct: 415 LDECTEIIVKTVKFFDER 432

>pdb|2EH6|A Chain A, Crystal Structure Of Acetylornithine Aminotransferase From Aquifex Aeolicus Vf5 Length = 375

Iteration: 1
 Score =  151 bits (382), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 192/416 (46%), Gaps = 61/416 (14%)
Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTL----PFYHSF 138
           P+   + +G Y+YD  GK+YLD ++G+   +LG + P+L  A   Q+  L      Y + 
Sbjct: 11  PVKFVRGKGVYLYDEEGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLYENP 70
Query: 139 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 198
           W        +LA +L++ F      KVFF NSG+E+ +  +KL   Y    G+ NK KFI
Sbjct: 71  WQE------ELAHKLVKHFWTE--GKVFFANSGTESVEAAIKLARKYWRDKGK-NKWKFI 121
Query: 199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258
           + + S+HG T  + S +G P  H+ F+   P V             PG     +S    N
Sbjct: 122 SFENSFHGRTYGSLSATGQPKFHKGFE---PLV-------------PG-----FSYAKLN 160
Query: 259 NLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFG 318
           ++ D + K   E  A  I E              +  K+Q + K+ D+L I DEV    G
Sbjct: 161 DI-DSVYKLLDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIG 219
Query: 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 378
           R G  +    +++KPD+++ AK L    +PIGAIL   EV     +QS T G  SHG T+
Sbjct: 220 RTGEFYAYQHFNLKPDVIALAKGLGGG-VPIGAILAREEV-----AQSFTPG--SHGSTF 271
Query: 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEF 438
            G+P++C      + + +   ++  V ++   F++ +K        G+++G GL+LG E 
Sbjct: 272 GGNPLACRAG--TVVVDEVEKLLPHVREVGNYFKEKLKELGK----GKVKGRGLMLGLEL 325
Query: 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELIS 494
                       E     Y     EK  ++   +G  +   PP I+  E +D  IS
Sbjct: 326 ------------ERECKDYVLKALEKGLLINCTAGKVLRFLPPLIIQKEHIDRAIS 369

>pdb|1SZK|A Chain A, The Structure Of Gamma-Aminobutyrate Aminotransferase Mutant: E211s Length = 426

Iteration: 1
 Score =  150 bits (379), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 181/372 (48%), Gaps = 30/372 (8%)
Query: 81  VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWN 140
           +HP+  +++E   V+DV G++YLD   G+     G   P++VAA  AQL  L  +  F  
Sbjct: 22  IHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLS-HTCFQV 80
Query: 141 RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIAR 200
              +P L+L + + +        K     +GSEA +  VK+      A     +   IA 
Sbjct: 81  LAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKI------ARAATKRSGTIAF 134
Query: 201 QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHP----GETEEEYSTRL 256
             +YHG T    +L+G      K + P    +     H +R  +P    G +E++    +
Sbjct: 135 SGAYHGRTHYTLALTG------KVN-PYSAGMGLMPGHVYRALYPCPLHGISEDDAIASI 187
Query: 257 ANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICA 316
               ++      PE IAA + E              + ++++A+  ++ I+ IADEV   
Sbjct: 188 HRIFKN---DAAPEDIAAIVIEPVQGSGGFYASSPAFMQRLRALCDEHGIMLIADEVQSG 244
Query: 317 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF 376
            GR GT+F  ++  + PDL +FAK+++  + P+  +    EV + +            G 
Sbjct: 245 AGRTGTLFAMEQMGVAPDLTTFAKSIAGGF-PLAGVTGRAEVMDAV-------APGGLGG 296
Query: 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILG 435
           TY+G+P++C  A+E LK++++ N++++ N +  K +DG+ A ++  P IG++RG G ++ 
Sbjct: 297 TYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIA 356
Query: 436 TEFADNKSPNEP 447
            E  ++   N+P
Sbjct: 357 IELFEDGDHNKP 368

>pdb|1SF2|A Chain A, Structure Of E. Coli Gamma-Aminobutyrate Aminotransferase Length = 426

Iteration: 1
 Score =  150 bits (378), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 181/372 (48%), Gaps = 30/372 (8%)
Query: 81  VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWN 140
           +HP+  +++E   V+DV G++YLD   G+     G   P++VAA  AQL  L  +  F  
Sbjct: 22  IHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLS-HTCFQV 80
Query: 141 RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIAR 200
              +P L+L + + +        K     +GSEA +  VK+      A     +   IA 
Sbjct: 81  LAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKI------ARAATKRSGTIAF 134
Query: 201 QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHP----GETEEEYSTRL 256
             +YHG T    +L+G      K + P    +     H +R  +P    G +E++    +
Sbjct: 135 SGAYHGRTHYTLALTG------KVN-PYSAGMGLMPGHVYRALYPCPLHGISEDDAIASI 187
Query: 257 ANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICA 316
               ++      PE IAA + E              + ++++A+  ++ I+ IADEV   
Sbjct: 188 HRIFKN---DAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSG 244
Query: 317 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF 376
            GR GT+F  ++  + PDL +FAK+++  + P+  +    EV + +            G 
Sbjct: 245 AGRTGTLFAMEQMGVAPDLTTFAKSIAGGF-PLAGVTGRAEVMDAV-------APGGLGG 296
Query: 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILG 435
           TY+G+P++C  A+E LK++++ N++++ N +  K +DG+ A ++  P IG++RG G ++ 
Sbjct: 297 TYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIA 356
Query: 436 TEFADNKSPNEP 447
            E  ++   N+P
Sbjct: 357 IELFEDGDHNKP 368

>pdb|1SZS|A Chain A, The Structure Of Gamma-aminobutyrate Aminotransferase Mutant: I50q Length = 426

Iteration: 1
 Score =  148 bits (374), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 180/372 (48%), Gaps = 30/372 (8%)
Query: 81  VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWN 140
           +HP+  +++E   V+DV G++YLD   G      G   P++VAA  AQL  L  +  F  
Sbjct: 22  IHPIFADRAENCRVWDVEGREYLDFAGGQAVLNTGHLHPKVVAAVEAQLKKLS-HTCFQV 80
Query: 141 RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIAR 200
              +P L+L + + +        K     +GSEA +  VK+      A     +   IA 
Sbjct: 81  LAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKI------ARAATKRSGTIAF 134
Query: 201 QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHP----GETEEEYSTRL 256
             +YHG T    +L+G      K + P    +     H +R  +P    G +E++    +
Sbjct: 135 SGAYHGRTHYTLALTG------KVN-PYSAGMGLMPGHVYRALYPCPLHGISEDDAIASI 187
Query: 257 ANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICA 316
               ++      PE IAA + E              + ++++A+  ++ I+ IADEV   
Sbjct: 188 HRIFKN---DAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSG 244
Query: 317 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF 376
            GR GT+F  ++  + PDL +FAK+++  + P+  +    EV + +            G 
Sbjct: 245 AGRTGTLFAMEQMGVAPDLTTFAKSIAGGF-PLAGVTGRAEVMDAV-------APGGLGG 296
Query: 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILG 435
           TY+G+P++C  A+E LK++++ N++++ N +  K +DG+ A ++  P IG++RG G ++ 
Sbjct: 297 TYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIA 356
Query: 436 TEFADNKSPNEP 447
            E  ++   N+P
Sbjct: 357 IELFEDGDHNKP 368

>pdb|1SZU|A Chain A, The Structure Of Gamma-Aminobutyrate Aminotransferase Mutant: V241a Length = 426

Iteration: 1
 Score =  148 bits (374), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 180/372 (48%), Gaps = 30/372 (8%)
Query: 81  VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWN 140
           +HP+  +++E   V+DV G++YLD   G+     G   P++VAA  AQL  L  +  F  
Sbjct: 22  IHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLS-HTCFQV 80
Query: 141 RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIAR 200
              +P L+L + + +        K     +GSEA +  VK+      A     +   IA 
Sbjct: 81  LAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKI------ARAATKRSGTIAF 134
Query: 201 QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHP----GETEEEYSTRL 256
             +YHG T    +L+G      K + P    +     H +R  +P    G +E++    +
Sbjct: 135 SGAYHGRTHYTLALTG------KVN-PYSAGMGLMPGHVYRALYPCPLHGISEDDAIASI 187
Query: 257 ANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICA 316
               ++      PE IAA + E              + ++++A+  ++ I+ IADE    
Sbjct: 188 HRIFKN---DAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEAQSG 244
Query: 317 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF 376
            GR GT+F  ++  + PDL +FAK+++  + P+  +    EV + +            G 
Sbjct: 245 AGRTGTLFAMEQMGVAPDLTTFAKSIAGGF-PLAGVTGRAEVMDAV-------APGGLGG 296
Query: 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILG 435
           TY+G+P++C  A+E LK++++ N++++ N +  K +DG+ A ++  P IG++RG G ++ 
Sbjct: 297 TYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIA 356
Query: 436 TEFADNKSPNEP 447
            E  ++   N+P
Sbjct: 357 IELFEDGDHNKP 368

>pdb|4ADB|A Chain A, Structural And Functional Study Of Succinyl-ornithine Transaminase From E. Coli Length = 406

Iteration: 1
 Score =  147 bits (372), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 199/421 (47%), Gaps = 46/421 (10%)
Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           P +  + EGS ++D  GK+Y+D   G+   ALG + P L  A   Q +   F+H+    T
Sbjct: 22  PFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASK--FWHTGNGYT 79
Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
            +P L LAK+L++   A+   +VFF NSG+EAN+  +KL   + +     +K   +A + 
Sbjct: 80  NEPVLRLAKKLID---ATFADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKN 136
Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 262
           ++HG TL   S  G PA  Q F   AP       P   R+A   +          N+   
Sbjct: 137 AFHGRTLFTVSAGGQPAYSQDF---APL------PADIRHAAYNDI---------NSASA 178
Query: 263 LILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGRLGT 322
           LI     ++  A I E              + + ++ +  +++ L I DEV    GR G 
Sbjct: 179 LI----DDSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGE 234
Query: 323 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382
           ++    Y + PDL++ AKAL   + P+GA+L + E + V+     T+G  +HG TY G+P
Sbjct: 235 LYAYMHYGVTPDLLTTAKALGGGF-PVGALLATEECARVM-----TVG--THGTTYGGNP 286
Query: 383 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFADN 441
           ++ AVA + L++     ++  V +    F + +   +    +  E+RG GL++G     +
Sbjct: 287 LASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNAD 346
Query: 442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYGKAL 500
            +         G       +  K G++V ++G N++  +P   +S EEV   + ++  A 
Sbjct: 347 YA---------GQAKQISQEAAKAGVMVLIAGGNVVRFAPALNVSEEEVTTGLDRFAAAC 397
Query: 501 K 501
           +
Sbjct: 398 E 398

>pdb|3RUY|A Chain A, Crystal Structure Of The Ornithine-Oxo Acid Transaminase Rocd From Bacillus Anthracis Length = 392

Iteration: 1
 Score =  145 bits (367), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 196/430 (45%), Gaps = 65/430 (15%)
Query: 72  FTAGWQSTDVHPL--VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQL 129
            T  + + + HPL  VI K+EG +V D  G +Y+D L+       G   P+++ A   Q 
Sbjct: 6   LTDTYGANNYHPLPIVISKAEGVWVEDPEGNRYMDLLSAYSAVNQGHRHPKIINALIDQA 65
Query: 130 NTLPFY-HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYN 186
           N +     +F +    P  +   +L    T  +M  V   N+G+EA +T +K    W Y+
Sbjct: 66  NRVTLTSRAFHSDQLGPWYEKVAKL----TNKEM--VLPMNTGAEAVETAIKTARRWAYD 119
Query: 187 NALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD--LPAPFVLHTDCPHYWRYAH 244
                 N+ + I  + ++HG T+ A S+S      + F   LP   V+    P+      
Sbjct: 120 VKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVI----PY------ 169
Query: 245 PGETEEEYSTRLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKY 304
                         +LE L     P T AAFI E              + ++   V KK 
Sbjct: 170 -------------GDLEALKAAITPNT-AAFILEPIQGEAGINIPPAGFLKEALEVCKKE 215
Query: 305 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHS 364
           ++LF+ADE+    GR G +F CD  ++ PD+     AL     PI              +
Sbjct: 216 NVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILGXALGGGVFPISC----------AAA 265
Query: 365 QSNTLGSF---SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS 421
             + LG F   SHG T+ G+P++CAV+I AL++ +E  + E+  ++  K    +K   D+
Sbjct: 266 NRDILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEI-DN 324
Query: 422 PIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSP 480
           P+I E+RG GL +G E       NEP  P       +  Q +  G+L + + +N++ ++P
Sbjct: 325 PMITEVRGKGLFIGIEL------NEPARP-------YCEQLKAAGLLCKETHENVIRIAP 371
Query: 481 PFIMSPEEVD 490
           P ++S E+++
Sbjct: 372 PLVISEEDLE 381

>pdb|1QJ3|A Chain A, Crystal Structure Of 7,8-Diaminopelargonic Acid Synthase In Complex With 7-Keto-8-Aminopelargonic Acid Length = 429

Iteration: 1
 Score =  139 bits (349), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 202/442 (45%), Gaps = 30/442 (6%)
Query: 63  FKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLV 122
           F    +L P+T+      V+P+V   +EG  +   +G++ +D ++  W    G + P+L 
Sbjct: 8   FDQRHILHPYTSMTSPLPVYPVV--SAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLN 65
Query: 123 AAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV 182
           AA  +Q++ +  +  F   T  P+++L ++L+ M T   +  VF  +SGS A +  +K+ 
Sbjct: 66  AAMKSQIDAMS-HVMFGGITHAPAIELCRKLVAM-TPQPLECVFLADSGSVAVEVAMKMA 123
Query: 183 WYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYWR 241
             Y  A G   +++F+  +  YHG T  A S+     ++H  +    P  L    P    
Sbjct: 124 LQYWQAKGE-ARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQ--- 179
Query: 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVV 301
                  + E+  R       L+     E  A  I                + ++++ + 
Sbjct: 180 ----SRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKIC 235
Query: 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEV 361
            +  IL IADE+   FGR G +F C+   I PD++   KAL+   M + A L + EV+E 
Sbjct: 236 DREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAET 295
Query: 362 IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS 421
           I   +   G F HG T+ G+P++CA A  +L I +  +  +QV  I  + ++ +    D+
Sbjct: 296 I--SNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDA 353
Query: 422 PIIGEIRGTGLI--LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMS 479
            ++ ++R  G I  + T    N +  + F  E              G+ +R  G  I + 
Sbjct: 354 EMVADVRVLGAIGVVETTHPVNMAALQKFFVE-------------QGVWIRPFGKLIYLM 400
Query: 480 PPFIMSPEEVDELISKYGKALK 501
           PP+I+ P+++  L +   +A++
Sbjct: 401 PPYIILPQQLQRLTAAVNRAVQ 422

>pdb|3NX3|A Chain A, Crystal Structure Of Acetylornithine Aminotransferase (Argd) From Campylobacter Jejuni Length = 395

Iteration: 1
 Score =  138 bits (348), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 193/421 (45%), Gaps = 48/421 (11%)
Query: 84  LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTT 143
           +V+EK +G Y++D   KKYLD  +G+   ALG +  +  A   AQ++ L    + +    
Sbjct: 20  IVLEKGQGVYLFDDKAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTSNLYYNE- 78
Query: 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK-KFIARQK 202
               ++A     +  AS + +VFFTNSG+E+ +   K    Y  A  +  K  +FIA + 
Sbjct: 79  ----NIAAAAKNLAKASALERVFFTNSGTESIEGAXKTARKY--AFNKGVKGGQFIAFKH 132
Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 262
           S+HG TL A SL+     ++K+    PF        + +Y      E     +L N    
Sbjct: 133 SFHGRTLGALSLTA----NEKYQ--KPFKPLISGVKFAKYNDISSVE-----KLVN---- 177
Query: 263 LILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGRLGT 322
                  E   A I E              +++ ++ +  + DIL IADE+ C  GR G 
Sbjct: 178 -------EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGXGRSGK 230
Query: 323 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382
            F  +   I PD+ + AKAL    + +GA +++ +V+      SN+L +  HG TY G+P
Sbjct: 231 FFAYEHAQILPDIXTSAKALGCG-LSVGAFVINQKVA------SNSLEAGDHGSTYGGNP 283
Query: 383 VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNK 442
           + CA      +I+KE  I+E VNK+ P  +  +       +I E        G  F    
Sbjct: 284 LVCAGVNAVFEIFKEEKILENVNKLTPYLEQSL-----DELINEFDFCKKRKGLGFXQGL 338
Query: 443 SPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELISKYGKALK 501
           S ++       I      +C+++ +L+   G+N +   PP I+  E +DE   K  KALK
Sbjct: 339 SLDKSVKVAKVI-----QKCQENALLLISCGENDLRFLPPLILQKEHIDEXSEKLRKALK 393
Query: 502 A 502
           +
Sbjct: 394 S 394

>pdb|1S0A|A Chain A, Crystal Structure Of The Y17f Mutant Of 7,8- Diaminopelargonic Acid Synthase Length = 429

Iteration: 1
 Score =  138 bits (347), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 201/442 (45%), Gaps = 30/442 (6%)
Query: 63  FKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLV 122
           F    +L PFT+      V+P+V   +EG  +   +G++ +D ++  W    G + P+L 
Sbjct: 8   FDQRHILHPFTSMTSPLPVYPVV--SAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLN 65
Query: 123 AAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV 182
           AA  +Q++ +  +  F   T  P+++L ++L+ M T   +  VF  +SGS A +  +K+ 
Sbjct: 66  AAMKSQIDAMS-HVMFGGITHAPAIELCRKLVAM-TPQPLECVFLADSGSVAVEVAMKMA 123
Query: 183 WYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYWR 241
             Y  A G   +++F+  +  YHG T  A S+     ++H  +    P  L    P    
Sbjct: 124 LQYWQAKGE-ARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQ--- 179
Query: 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVV 301
                  + E+  R       L+     E  A  I                + ++++ + 
Sbjct: 180 ----SRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKIC 235
Query: 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEV 361
            +  IL IADE+   FGR G +F C+   I PD++    AL+   M + A L + EV+E 
Sbjct: 236 DREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGXALTGGTMTLSATLTTREVAET 295
Query: 362 IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS 421
           I   +   G F HG T+ G+P++CA A  +L I +  +  +QV  I  + ++ +    D+
Sbjct: 296 I--SNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDA 353
Query: 422 PIIGEIRGTGLI--LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMS 479
            ++ ++R  G I  + T    N +  + F  E              G+ +R  G  I + 
Sbjct: 354 EMVADVRVLGAIGVVETTHPVNMAALQKFFVE-------------QGVWIRPFGKLIYLM 400
Query: 480 PPFIMSPEEVDELISKYGKALK 501
           PP+I+ P+++  L +   +A++
Sbjct: 401 PPYIILPQQLQRLTAAVNRAVQ 422

>pdb|1S08|A Chain A, Crystal Structure Of The D147n Mutant Of 7,8- Diaminopelargonic Acid Synthase Length = 429

Iteration: 1
 Score =  137 bits (344), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 202/442 (45%), Gaps = 30/442 (6%)
Query: 63  FKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLV 122
           F    +L P+T+      V+P+V   +EG  +   +G++ +D ++  W    G + P+L 
Sbjct: 8   FDQRHILHPYTSMTSPLPVYPVV--SAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLN 65
Query: 123 AAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV 182
           AA  +Q++ +  +  F   T  P+++L ++L+ M T   +  VF  +SGS A +  +K+ 
Sbjct: 66  AAMKSQIDAMS-HVMFGGITHAPAIELCRKLVAM-TPQPLECVFLADSGSVAVEVAMKMA 123
Query: 183 WYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYWR 241
             Y  A G   +++F+  +  YHG+T  A S+     ++H  +    P  L    P    
Sbjct: 124 LQYWQAKGE-ARQRFLTFRNGYHGNTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQ--- 179
Query: 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVV 301
                  + E+  R       L+     E  A  I                + ++++ + 
Sbjct: 180 ----SRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKIC 235
Query: 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEV 361
            +  IL IADE+   FGR G +F C+   I PD++    AL+   M + A L + EV+E 
Sbjct: 236 DREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGXALTGGTMTLSATLTTREVAET 295
Query: 362 IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS 421
           I   +   G F HG T+ G+P++CA A  +L I +  +  +QV  I  + ++ +    D+
Sbjct: 296 I--SNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDA 353
Query: 422 PIIGEIRGTGLI--LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMS 479
            ++ ++R  G I  + T    N +  + F  E              G+ +R  G  I + 
Sbjct: 354 EMVADVRVLGAIGVVETTHPVNMAALQKFFVE-------------QGVWIRPFGKLIYLM 400
Query: 480 PPFIMSPEEVDELISKYGKALK 501
           PP+I+ P+++  L +   +A++
Sbjct: 401 PPYIILPQQLQRLTAAVNRAVQ 422

>pdb|1S07|A Chain A, Crystal Structure Of The R253a Mutant Of 7,8-Diaminopelargonic Acid Synthase Length = 429

Iteration: 1
 Score =  135 bits (341), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 201/442 (45%), Gaps = 30/442 (6%)
Query: 63  FKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLV 122
           F    +L P+T+      V+P+V   +EG  +   +G++ +D ++  W    G + P+L 
Sbjct: 8   FDQRHILHPYTSMTSPLPVYPVV--SAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLN 65
Query: 123 AAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV 182
           AA  +Q++ +  +  F   T  P+++L ++L+ M T   +  VF  +SGS A +  +K+ 
Sbjct: 66  AAMKSQIDAMS-HVMFGGITHAPAIELCRKLVAM-TPQPLECVFLADSGSVAVEVAMKMA 123
Query: 183 WYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYWR 241
             Y  A G   +++F+  +  YHG T  A S+     ++H  +    P  L    P    
Sbjct: 124 LQYWQAKGE-ARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQ--- 179
Query: 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVV 301
                  + E+  R       L+     E  A  I                + ++++ + 
Sbjct: 180 ----SRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKIC 235
Query: 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEV 361
            +  IL IADE+   FG  G +F C+   I PD++   KAL+   M + A L + EV+E 
Sbjct: 236 DREGILLIADEIATGFGATGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAET 295
Query: 362 IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS 421
           I   +   G F HG T+ G+P++CA A  +L I +  +  +QV  I  + ++ +    D+
Sbjct: 296 I--SNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDA 353
Query: 422 PIIGEIRGTGLI--LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMS 479
            ++ ++R  G I  + T    N +  + F  E              G+ +R  G  I + 
Sbjct: 354 EMVADVRVLGAIGVVETTHPVNMAALQKFFVE-------------QGVWIRPFGKLIYLM 400
Query: 480 PPFIMSPEEVDELISKYGKALK 501
           PP+I+ P+++  L +   +A++
Sbjct: 401 PPYIILPQQLQRLTAAVNRAVQ 422

>pdb|1MGV|A Chain A, Crystal Structure Of The R391a Mutant Of 7,8-Diaminopelargonic Acid Synthase Length = 429

Iteration: 1
 Score =  135 bits (341), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 201/442 (45%), Gaps = 30/442 (6%)
Query: 63  FKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLV 122
           F    +L P+T+      V+P+V   +EG  +   +G++ +D ++  W    G + P+L 
Sbjct: 8   FDQRHILHPYTSMTSPLPVYPVV--SAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLN 65
Query: 123 AAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV 182
           AA  +Q++ +  +  F   T  P+++L ++L+ M T   +  VF  +SGS A +  +K+ 
Sbjct: 66  AAMKSQIDAMS-HVMFGGITHAPAIELCRKLVAM-TPQPLECVFLADSGSVAVEVAMKMA 123
Query: 183 WYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYWR 241
             Y  A G   +++F+  +  YHG T  A S+     ++H  +    P  L    P    
Sbjct: 124 LQYWQAKGE-ARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQ--- 179
Query: 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVV 301
                  + E+  R       L+     E  A  I                + ++++ + 
Sbjct: 180 ----SRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKIC 235
Query: 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEV 361
            +  IL IADE+   FGR G +F C+   I PD++   KAL+   M + A L + EV+E 
Sbjct: 236 DREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAET 295
Query: 362 IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS 421
           I   +   G F HG T+ G+P++CA A  +L I +  +  +QV  I  + ++ +    D+
Sbjct: 296 I--SNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDA 353
Query: 422 PIIGEIRGTGLI--LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMS 479
            ++ ++R  G I  + T    N +  + F  E              G+ +   G  I + 
Sbjct: 354 EMVADVRVLGAIGVVETTHPVNMAALQKFFVE-------------QGVWIAPFGKLIYLM 400
Query: 480 PPFIMSPEEVDELISKYGKALK 501
           PP+I+ P+++  L +   +A++
Sbjct: 401 PPYIILPQQLQRLTAAVNRAVQ 422

>pdb|1DTY|A Chain A, Crystal Structure Of Adenosylmethionine-8-Amino-7-Oxonanoate Aminotransferase With Pyridoxal Phosphate Cofactor. Length = 429

Iteration: 1
 Score =  135 bits (341), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 200/442 (45%), Gaps = 30/442 (6%)
Query: 63  FKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLV 122
           F    +  P+T+      V+P+V   +EG  +   +G++ +D ++  W    G + P+L 
Sbjct: 8   FDERHIWHPYTSMTSPLPVYPVV--SAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLN 65
Query: 123 AAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV 182
           AA  +Q++ +  +  F   T  P+++L ++L+ M T   +  VF  +SGS A +  +K+ 
Sbjct: 66  AAMKSQIDAMS-HVMFGEITHAPAIELCRKLVAM-TPQPLECVFLADSGSVAVEVAMKMA 123
Query: 183 WYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYWR 241
             Y +A G   + +F+  +  YHG T  A S+     ++H  +    P  L    P    
Sbjct: 124 LQYWDAKGE-ARDRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQ--- 179
Query: 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVV 301
                  + E+  R       L+     E  A  I                + ++++ + 
Sbjct: 180 ----SRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKIC 235
Query: 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEV 361
            +  IL IADE+   FGR G +F C+   I PD++   KAL+   M + A L + EV+E 
Sbjct: 236 DREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAET 295
Query: 362 IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS 421
           I       G F HG T+ G+P++CA A  +L I +  +  +QV  I  + ++ +    D+
Sbjct: 296 I--SDGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDA 353
Query: 422 PIIGEIRGTGLI--LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMS 479
            ++ ++R  G I  + T    N +  + F  E              G+ +R  G  I + 
Sbjct: 354 EMVADVRVLGAIGVVETTHPVNMAALQKFFVE-------------QGVWIRPFGKLIYLM 400
Query: 480 PPFIMSPEEVDELISKYGKALK 501
           PP+I+ P+++  L +   +A++
Sbjct: 401 PPYIILPQQLQRLTAAVNRAVQ 422

>pdb|1S09|A Chain A, Crystal Structure Of The Y144f Mutant Of 7,8- Diaminopelargonic Acid Synthase Length = 429

Iteration: 1
 Score =  135 bits (340), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 201/442 (45%), Gaps = 30/442 (6%)
Query: 63  FKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLV 122
           F    +L P+T+      V+P+V   +EG  +   +G++ +D ++  W    G + P+L 
Sbjct: 8   FDQRHILHPYTSMTSPLPVYPVV--SAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLN 65
Query: 123 AAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV 182
           AA  +Q++ +  +  F   T  P+++L ++L+ M T   +  VF  +SGS A +  +K+ 
Sbjct: 66  AAMKSQIDAMS-HVMFGGITHAPAIELCRKLVAM-TPQPLECVFLADSGSVAVEVAMKMA 123
Query: 183 WYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYWR 241
             Y  A G   +++F+  +  +HG T  A S+     ++H  +    P  L    P    
Sbjct: 124 LQYWQAKGE-ARQRFLTFRNGFHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQ--- 179
Query: 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVV 301
                  + E+  R       L+     E  A  I                + ++++ + 
Sbjct: 180 ----SRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKIC 235
Query: 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEV 361
            +  IL IADE+   FGR G +F C+   I PD++    AL+   M + A L + EV+E 
Sbjct: 236 DREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGXALTGGTMTLSATLTTREVAET 295
Query: 362 IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS 421
           I   +   G F HG T+ G+P++CA A  +L I +  +  +QV  I  + ++ +    D+
Sbjct: 296 I--SNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDA 353
Query: 422 PIIGEIRGTGLI--LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMS 479
            ++ ++R  G I  + T    N +  + F  E              G+ +R  G  I + 
Sbjct: 354 EMVADVRVLGAIGVVETTHPVNMAALQKFFVE-------------QGVWIRPFGKLIYLM 400
Query: 480 PPFIMSPEEVDELISKYGKALK 501
           PP+I+ P+++  L +   +A++
Sbjct: 401 PPYIILPQQLQRLTAAVNRAVQ 422

>pdb|1S06|A Chain A, Crystal Structure Of The R253k Mutant Of 7,8- Diaminopelargonic Acid Synthase Length = 429

Iteration: 1
 Score =  135 bits (339), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 201/442 (45%), Gaps = 30/442 (6%)
Query: 63  FKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLV 122
           F    +L P+T+      V+P+V   +EG  +   +G++ +D ++  W    G + P+L 
Sbjct: 8   FDQRHILHPYTSMTSPLPVYPVV--SAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLN 65
Query: 123 AAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV 182
           AA  +Q++ +  +  F   T  P+++L ++L+ M T   +  VF  +SGS A +  +K+ 
Sbjct: 66  AAMKSQIDAMS-HVMFGGITHAPAIELCRKLVAM-TPQPLECVFLADSGSVAVEVAMKMA 123
Query: 183 WYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYWR 241
             Y  A G   +++F+  +  YHG T  A S+     ++H  +    P  L    P    
Sbjct: 124 LQYWQAKGE-ARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQ--- 179
Query: 242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVV 301
                  + E+  R       L+     E  A  I                + ++++ + 
Sbjct: 180 ----SRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKIC 235
Query: 302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEV 361
            +  IL IADE+   FG+ G +F C+   I PD++    AL+   M + A L + EV+E 
Sbjct: 236 DREGILLIADEIATGFGKTGKLFACEHAEIAPDILCLGXALTGGTMTLSATLTTREVAET 295
Query: 362 IHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS 421
           I   +   G F HG T+ G+P++CA A  +L I +  +  +QV  I  + ++ +    D+
Sbjct: 296 I--SNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDA 353
Query: 422 PIIGEIRGTGLI--LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMS 479
            ++ ++R  G I  + T    N +  + F  E              G+ +R  G  I + 
Sbjct: 354 EMVADVRVLGAIGVVETTHPVNMAALQKFFVE-------------QGVWIRPFGKLIYLM 400
Query: 480 PPFIMSPEEVDELISKYGKALK 501
           PP+I+ P+++  L +   +A++
Sbjct: 401 PPYIILPQQLQRLTAAVNRAVQ 422

>pdb|2BYJ|A Chain A, Ornithine Aminotransferase Mutant Y85i Length = 439

Iteration: 1
 Score =  134 bits (338), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 179/422 (42%), Gaps = 48/422 (11%)
Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWNR 141
           P+ +E+ +G Y++DV G+KY D L+ +     G   P++V A  +Q++ L     +F+N 
Sbjct: 59  PVALERGKGIYLWDVEGRKYFDFLSSISAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNN 118
Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRPNKKKFIA 199
                 +   +L          KV   N+G EA +T  KL   W Y     +  K K + 
Sbjct: 119 VLGEYEEYITKLFNYH------KVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVF 172
Query: 200 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259
              ++ G TL A S S  P  +  F    PF+   D   Y                  N+
Sbjct: 173 AAGNFWGRTLSAISSSTDPTSYDGF---GPFMPGFDIIPY------------------ND 211
Query: 260 LEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGR 319
           L  L        +AAF+ E              Y   V+ +  ++ +LFIADE+     R
Sbjct: 212 LPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLAR 271
Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
            G     D  +++PD+V   KALS    P+ A+L   ++   I           HG TY 
Sbjct: 272 TGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPG-------EHGSTYG 324
Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFA 439
           G+P+ C VAI AL++ +E N+ E  +K+    ++ +     S ++  +RG GL+      
Sbjct: 325 GNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLP-SDVVTAVRGKGLLNAIVIK 383
Query: 440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VSGDNIMMSPPFIMSPEEVDELISKYGK 498
           + K  +      W +      +   +G+L +   GD I  +PP ++  +E+ E I    K
Sbjct: 384 ETKDWD-----AWKV----CLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESIEIINK 434
Query: 499 AL 500
            +
Sbjct: 435 TI 436

>pdb|1OAT|A Chain A, Ornithine Aminotransferase Length = 439

Iteration: 1
 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 178/422 (42%), Gaps = 48/422 (11%)
Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWNR 141
           P+ +E+ +G Y++DV G+KY D L+       G   P++V A  +Q++ L     +F+N 
Sbjct: 59  PVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNN 118
Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRPNKKKFIA 199
                 +   +L          KV   N+G EA +T  KL   W Y     +  K K + 
Sbjct: 119 VLGEYEEYITKLFNYH------KVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVF 172
Query: 200 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259
              ++ G TL A S S  P  +  F    PF+   D   Y                  N+
Sbjct: 173 AAGNFWGRTLSAISSSTDPTSYDGF---GPFMPGFDIIPY------------------ND 211
Query: 260 LEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGR 319
           L  L        +AAF+ E              Y   V+ +  ++ +LFIADE+     R
Sbjct: 212 LPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLAR 271
Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
            G     D  +++PD+V   KALS    P+ A+L   ++   I           HG TY 
Sbjct: 272 TGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPG-------EHGSTYG 324
Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFA 439
           G+P+ C VAI AL++ +E N+ E  +K+    ++ +     S ++  +RG GL+      
Sbjct: 325 GNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLP-SDVVTAVRGKGLLNAIVIK 383
Query: 440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VSGDNIMMSPPFIMSPEEVDELISKYGK 498
           + K  +      W +      +   +G+L +   GD I  +PP ++  +E+ E I    K
Sbjct: 384 ETKDWD-----AWKV----CLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESIEIINK 434
Query: 499 AL 500
            +
Sbjct: 435 TI 436

>pdb|2CAN|A Chain A, Human Ornithine Aminotransferase Complexed With L-Canaline Length = 402

Iteration: 1
 Score =  133 bits (334), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 178/422 (42%), Gaps = 48/422 (11%)
Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWNR 141
           P+ +E+ +G Y++DV G+KY D L+       G   P++V A  +Q++ L     +F+N 
Sbjct: 22  PVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNN 81
Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRPNKKKFIA 199
                 +   +L          KV   N+G EA +T  KL   W Y     +  K K + 
Sbjct: 82  VLGEYEEYITKLFNYH------KVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVF 135
Query: 200 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259
              ++ G TL A S S  P  +  F    PF+   D   Y                  N+
Sbjct: 136 AAGNFWGRTLSAISSSTDPTSYDGF---GPFMPGFDIIPY------------------ND 174
Query: 260 LEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGR 319
           L  L        +AAF+ E              Y   V+ +  ++ +LFIADE+     R
Sbjct: 175 LPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLAR 234
Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
            G     D  +++PD+V   KALS    P+ A+L   ++   I           HG TY 
Sbjct: 235 TGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPG-------EHGSTYG 287
Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFA 439
           G+P+ C VAI AL++ +E N+ E  +K+    ++ +     S ++  +RG GL+      
Sbjct: 288 GNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLP-SDVVTAVRGKGLLNAIVIK 346
Query: 440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VSGDNIMMSPPFIMSPEEVDELISKYGK 498
           + K  +      W +      +   +G+L +   GD I  +PP ++  +E+ E I    K
Sbjct: 347 ETKDWD-----AWKV----CLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESIEIINK 397
Query: 499 AL 500
            +
Sbjct: 398 TI 399

>pdb|2BYL|A Chain A, Structure Of Ornithine Aminotransferase Triple Mutant Y85i Y55a G320f Length = 439

Iteration: 1
 Score =  130 bits (328), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 178/422 (42%), Gaps = 48/422 (11%)
Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWNR 141
           P+ +E+ +G Y++DV G+KY D L+ +     G   P++V A  +Q++ L     +F+N 
Sbjct: 59  PVALERGKGIYLWDVEGRKYFDFLSSISAVNQGHCHPKIVNALKSQVDKLTLTSRAFYNN 118
Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRPNKKKFIA 199
                 +   +L          KV   N+G EA +T  KL   W Y     +  K K + 
Sbjct: 119 VLGEYEEYITKLFNYH------KVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVF 172
Query: 200 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259
              ++ G TL A S S  P  +  F    PF+   D   Y                  N+
Sbjct: 173 AAGNFWGRTLSAISSSTDPTSYDGF---GPFMPGFDIIPY------------------ND 211
Query: 260 LEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGR 319
           L  L        +AAF+ E              Y   V+ +  ++ +LFIADE+     R
Sbjct: 212 LPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLAR 271
Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
            G     D  +++PD+V   KALS    P+ A+L   ++   I           H  TY 
Sbjct: 272 TGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKPG-------EHFSTYG 324
Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFA 439
           G+P+ C VAI AL++ +E N+ E  +K+    ++ +     S ++  +RG GL+      
Sbjct: 325 GNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLP-SDVVTAVRGKGLLNAIVIK 383
Query: 440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-VSGDNIMMSPPFIMSPEEVDELISKYGK 498
           + K  +      W +      +   +G+L +   GD I  +PP ++  +E+ E I    K
Sbjct: 384 ETKDWD-----AWKV----CLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESIEIINK 434
Query: 499 AL 500
            +
Sbjct: 435 TI 436

>pdb|1VEF|A Chain A, Acetylornithine Aminotransferase From Thermus Thermophilus Hb8 Length = 395

Iteration: 1
 Score =  127 bits (320), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 182/417 (43%), Gaps = 59/417 (14%)
Query: 82  HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNR 141
           H L+I + +G+ V+D  G +Y+D + G     LG   P +V A   Q  TL         
Sbjct: 27  HDLLIVRGQGARVWDAEGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQ---- 82
Query: 142 TTKPSLDLAKELLEMFTA---SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 198
            T P+  +  E     TA    ++ +VF  NSG+EAN+  +K    +        +KKF+
Sbjct: 83  -TLPT-PMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHT------GRKKFV 134
Query: 199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258
           A  + + G T+ + S++  P   + F    P V   +   Y                  N
Sbjct: 135 AAMRGFSGRTMGSLSVTWEPKYREPF---LPLVEPVEFIPY------------------N 173
Query: 259 NLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFG 318
           ++E L      ET AA I E              +    + + ++   L I DE+    G
Sbjct: 174 DVEALKRAVDEET-AAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMG 232
Query: 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 378
           R G  F  + + I PD+++ AKAL    +P+G  ++  EV       + ++    HG T+
Sbjct: 233 RTGKRFAFEHFGIVPDILTLAKALGGG-VPLGVAVMREEV-------ARSMPKGGHGTTF 284
Query: 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEF 438
            G+P++ A  + A++  +   + E+  ++ P F + ++A   SP I E+RG GL++G E 
Sbjct: 285 GGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIP-SPKIREVRGMGLMVGLEL 343
Query: 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELIS 494
            +  +P            Y     ++H +L   +G  ++   PP ++  E+++ ++ 
Sbjct: 344 KEKAAP------------YIARLEKEHRVLALQAGPTVIRFLPPLVIEKEDLERVVE 388

>pdb|3TFT|A Chain A, Crystal Structure Of 7,8-Diaminopelargonic Acid Synthase (Bioa) From Mycobacterium Tuberculosis, Pre-Reaction Complex With A 3,6- Dihydropyrid-2-One Heterocycle Inhibitor Length = 457

Iteration: 1
 Score =  127 bits (320), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 176/407 (43%), Gaps = 33/407 (8%)
Query: 92  SYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAK 151
           + + D    + LD+++  W    G   P L  A T QL  +  +  F   T +P+  LAK
Sbjct: 67  TLIRDGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMN-HVMFGGLTHEPAARLAK 125
Query: 152 ELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA 211
            L+++ T + +  VFF++SGS + +   K+   Y    G P K++ +  +  YHG T +A
Sbjct: 126 LLVDI-TPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLA 184
Query: 212 ASL----SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE 267
            S+     G+ +L    D+ A  V     P             +Y    +   E  + + 
Sbjct: 185 MSICDPHGGMHSLWT--DVLAAQVFAPQVP------------RDYDPAYSAAFEAQLAQH 230
Query: 268 GPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCD 327
             E  A  +                Y   ++ + ++Y++L I DE+   FGR G +F  D
Sbjct: 231 AGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAAD 290
Query: 328 KYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 387
              + PD++   KAL+  Y+ + A L + +V+  I   +   G+  HG T+  +P++CAV
Sbjct: 291 HAGVSPDIMCVGKALTGGYLSLAATLCTADVAHTI--SAGAAGALMHGPTFMANPLACAV 348
Query: 388 AIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEP 447
           ++ ++++   ++   ++ ++A     G+      P + ++R  G I G    D       
Sbjct: 349 SVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDVRVCGAI-GVIECDRPVDLAV 407
Query: 448 FPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELIS 494
             P               G+ +R   + +   PP+I +P E+ ++ S
Sbjct: 408 ATPA----------ALDRGVWLRPFRNLVYAMPPYICTPAEITQITS 444

>pdb|3LV2|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis 7,8-Diaminopelargonic Acid Synthase In Complex With Substrate Analog Sinefungin Length = 462

Iteration: 1
 Score =  125 bits (313), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/407 (22%), Positives = 175/407 (42%), Gaps = 33/407 (8%)
Query: 92  SYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAK 151
           + + D    + LD+++  W    G   P L  A T QL  +  +  F   T +P+  LAK
Sbjct: 72  TLIRDGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMN-HVMFGGLTHEPAARLAK 130
Query: 152 ELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA 211
            L+++ T + +  VFF++SGS + +   K+   Y    G P K++ +  +  YHG T +A
Sbjct: 131 LLVDI-TPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLA 189
Query: 212 ASL----SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE 267
            S+     G+ +L    D+ A  V     P             +Y    +   E  + + 
Sbjct: 190 MSICDPHGGMHSLWT--DVLAAQVFAPQVP------------RDYDPAYSAAFEAQLAQH 235
Query: 268 GPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCD 327
             E  A  +                Y   ++ + ++Y++L I DE+   FGR G +F  D
Sbjct: 236 AGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAAD 295
Query: 328 KYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 387
              + PD++   KAL+  Y+ + A L + +V+  I   +   G+   G T+  +P++CAV
Sbjct: 296 HAGVSPDIMCVGKALTGGYLSLAATLCTADVAHTI--SAGAAGALMRGPTFMANPLACAV 353
Query: 388 AIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEP 447
           ++ ++++   ++   ++ ++A     G+      P + ++R  G I G    D       
Sbjct: 354 SVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDVRVCGAI-GVIECDRPVDLAV 412
Query: 448 FPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELIS 494
             P               G+ +R   + +   PP+I +P E+ ++ S
Sbjct: 413 ATPA----------ALDRGVWLRPFRNLVYAMPPYICTPAEITQITS 449

>pdb|3BV0|A Chain A, Crystal Structure Of Plp Bound 7,8-Diaminopelargonic Acid Synthase In Mycobacterium Tuberculosis Length = 437

Iteration: 1
 Score =  124 bits (312), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/407 (22%), Positives = 175/407 (42%), Gaps = 33/407 (8%)
Query: 92  SYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAK 151
           + + D    + LD+++  W    G   P L  A T QL  +  +  F   T +P+  LAK
Sbjct: 47  TLIRDGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMN-HVMFGGLTHEPAARLAK 105
Query: 152 ELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA 211
            L+++ T + +  VFF++SGS + +   K+   Y    G P K++ +  +  YHG T +A
Sbjct: 106 LLVDI-TPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLA 164
Query: 212 ASL----SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE 267
            S+     G+ +L    D+ A  V     P             +Y    +   E  + + 
Sbjct: 165 MSICDPHGGMHSLWT--DVLAAQVFAPQVP------------RDYDPAYSAAFEAQLAQH 210
Query: 268 GPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCD 327
             E  A  +                Y   ++ + ++Y++L I DE+   FGR G +F  D
Sbjct: 211 AGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAAD 270
Query: 328 KYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV 387
              + PD++   KAL+  Y+ + A L + +V+  I   +   G+   G T+  +P++CAV
Sbjct: 271 HAGVSPDIMCVGKALTGGYLSLAATLCTADVAHTI--SAGAAGALMRGPTFMANPLACAV 328
Query: 388 AIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEP 447
           ++ ++++   ++   ++ ++A     G+      P + ++R  G I G    D       
Sbjct: 329 SVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDVRVCGAI-GVIECDRPVDLAV 387
Query: 448 FPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELIS 494
             P               G+ +R   + +   PP+I +P E+ ++ S
Sbjct: 388 ATPA----------ALDRGVWLRPFRNLVYAMPPYICTPAEITQITS 424

>pdb|3R4T|A Chain A, Crystal Structure Of 4-Aminobutyrate Aminotransferase Gabt From Mycobacterium Marinum Covalently Bound To Pyridoxal Phosphate Length = 467

Iteration: 1
 Score =  119 bits (299), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 190/424 (44%), Gaps = 39/424 (9%)
Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           P+ + ++ G  V D +G + +D  +G+  T +G S PR+V A   Q+    F H+ +  T
Sbjct: 61  PVFVVRAGGGIVEDADGNRLIDLGSGIAVTTIGNSAPRVVDAVRDQVEQ--FTHTCFMVT 118
Query: 143 T-KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
             +  + +A++L  +   S   +    NSG+EA +  +K+   +        K+  +A  
Sbjct: 119 PYEQYVAVAEQLNRITPGSGEKRTVLFNSGAEAVENSIKVARAHTR------KQAVVAFD 172
Query: 202 KSYHGSTLIAASLSGLPALHQK-FDLPAPFVLHTDCPHYWR---YAHPGETEEEYSTRLA 257
            +YHG T +  +L+     ++  F   AP +      + +R         T+ E +   A
Sbjct: 173 YAYHGRTNLTMALTAKSMPYKSGFGPFAPEIYRAPVSYPYRDNLLDKDIATDGELAAERA 232
Query: 258 NNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAF 317
            NL D  +  G   +AA I E              +   +Q   +  D++FIADEV   F
Sbjct: 233 INLIDKQI--GAANLAAVIIEPIAGEGGFIVPADGFLPALQRWCRDNDVVFIADEVQTGF 290
Query: 318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377
            R G MF CD  +++PDL+  A  ++  + P+ A+    E+ +  H+          G T
Sbjct: 291 ARTGAMFACDHENVEPDLIVTAXGIADGF-PLSAVTGRAEIMDAPHTS-------GLGGT 342
Query: 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQD---GVKAFSDSPIIGEIRGTGLIL 434
           + G+PV+CA A+  ++  +   +VE+  +I     D    ++A  D   +G++RG G ++
Sbjct: 343 FGGNPVACAAALATIETIERDGMVERARQIERLVMDRLLRLQAADDR--LGDVRGRGAMI 400
Query: 435 GTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDNIMMSPPFIMSPEEVDE 491
             E   + +      P+  +     A     G++V      G+ I + PP  +S    DE
Sbjct: 401 AMELVKSGTAE----PDAALTQKLAAAAHAAGVIVLTCGMFGNVIRLLPPLTIS----DE 452
Query: 492 LISK 495
           L+S+
Sbjct: 453 LLSE 456

>pdb|4FFC|A Chain A, Crystal Structure Of A 4-Aminobutyrate Aminotransferase (Gabt) From Mycobacterium Abscessus Length = 453

Iteration: 1
 Score =  117 bits (293), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 192/440 (43%), Gaps = 34/440 (7%)
Query: 70  APFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQL 129
           A  +AG  ST   P+    ++G  + D +G  ++D  AG+  T +G S P + AA   Q 
Sbjct: 36  AAVSAGVGST--APVYAVDADGGVIVDADGNSFIDLGAGIAVTTVGASHPAVAAAIADQA 93
Query: 130 NTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAK-VFFTNSGSEANDTQVKLVWYYNNA 188
               F H+ +  T         ELL   T     K     NSG+EA +  +K+      A
Sbjct: 94  TH--FTHTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARL---A 148
Query: 189 LGRPNKKKFIARQKSYHGSTLIAASLSG--LPALHQKFDLPAPFVLHTDCPHYWRYAHPG 246
            GRP     +A   +YHG T +  +L+   +P    +F   AP V      +  R   PG
Sbjct: 149 TGRP---AVVAFDNAYHGRTNLTMALTAKSMP-YKSQFGPFAPEVYRMPASYPLRD-EPG 203
Query: 247 ETEEEYSTRLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDI 306
            T EE + R  + +E  I   G +++AA I E              +   + A   +  +
Sbjct: 204 LTGEEAARRAISRIETQI---GAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGV 260
Query: 307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQS 366
           +FIADEV   F R G  F  +   I PD+V+ A  ++   MP+ A+    E+ + +++  
Sbjct: 261 VFIADEVQTGFARTGAWFASEHEGIVPDIVTMAXGIAGG-MPLSAVTGRAELMDAVYAGG 319
Query: 367 NTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIG 425
                     TY G+PV+CA A+ AL + +E ++  +   I       + A ++   IIG
Sbjct: 320 LG-------GTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIG 372
Query: 426 EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDNIMMSPPF 482
           E+RG G +L  E     +      P+  +     A+    G+L+      G+ I + PP 
Sbjct: 373 EVRGRGAMLAIEIVKPGT----LEPDAALTKSIAAEALSQGVLILTCGTFGNVIRLLPPL 428
Query: 483 IMSPEEVDELISKYGKALKA 502
           ++  + +DE I+     ++A
Sbjct: 429 VIGDDLLDEGITALSDIIRA 448

>pdb|3OKS|A Chain A, Crystal Structure Of 4-Aminobutyrate Transaminase From Mycobacterium Smegmatis Length = 451

Iteration: 1
 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 176/403 (43%), Gaps = 36/403 (8%)
Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           P+   ++ G  V DV+G + +D  +G+  T +G S P++V A  +Q+    F H+ +  T
Sbjct: 44  PVYAVRAGGGIVEDVDGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGD--FTHTCFMVT 101
Query: 143 TKPSLDLAKELLEMFT---ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 199
                    E L   T     K + +F  NSGSEA +  VK+   + +      K   +A
Sbjct: 102 PYEGYVAVCEQLNRLTPVRGDKRSALF--NSGSEAVENAVKIARSHTH------KPAVVA 153
Query: 200 RQKSYHGSTLIAASLSG--LPALHQKFDLPAPFVLHTDCPHYWRYAHPGE---TEEEYST 254
              +YHG T +  +L+   +P     F   AP +      + +R A  G+   T+ E + 
Sbjct: 154 FDHAYHGRTNLTMALTAKVMP-YKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAA 212
Query: 255 RLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVI 314
           + A  + D  +  G + +AA + E              +   +    +K D++FIADEV 
Sbjct: 213 KRAITVIDKQI--GADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQ 270
Query: 315 CAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSH 374
             F R G MF C+   I PDL+  A  ++   +P+ A+    E+ +  H           
Sbjct: 271 TGFARTGAMFACEHEGIDPDLIVTAXGIAGG-LPLSAVTGRAEIMDSPHVS-------GL 322
Query: 375 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLI 433
           G TY G+P++CA A+  ++  +   +V +  +I    +D +    ++   IG++RG G +
Sbjct: 323 GGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGDVRGRGAM 382
Query: 434 LGTEF--ADNKSPNEPFPPEWGIGAYFGA----QCEKHGMLVR 470
           +  E   A    P+         GA+        C  +G +VR
Sbjct: 383 IAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGTYGNVVR 425

>pdb|4ATP|A Chain A, Structure Of Gaba-Transaminase A1r958 From Arthrobacter Aurescens In Complex With Plp Length = 456

Iteration: 1
 Score = 96.7 bits (239), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 182/439 (41%), Gaps = 50/439 (11%)
Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           P+ +E ++G  + DV+G  ++D  +G+  T++G S+P +VAA         F H+ +  T
Sbjct: 47  PVYVEDADGGIIRDVDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAH--FTHTCFMVT 104
Query: 143 TKPSLDLAKELLEMFTASKMAK--VFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIAR 200
                    E L   T    AK  V F NSG+EA +  VK+      A GR      +A 
Sbjct: 105 PYEGYVAVTEQLNRLTPGDHAKRTVLF-NSGAEAVENAVKVARL---ATGR---DAVVAF 157
Query: 201 QKSYHGSTLIAASLSGLPALHQ-KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259
             +YHG T +  +L+     ++  F   AP V      + +R  +P  T  E + R    
Sbjct: 158 DHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITM 217
Query: 260 LEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGR 319
           +E  I   G + +AA I E              +   +    K+  I+FIADEV   F R
Sbjct: 218 IEKQI---GGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCR 274
Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF--- 376
            G  F  D   + PD+++ AK ++   +P+ AI    ++ + +H          +     
Sbjct: 275 TGEWFAVDHEGVVPDIITMAKGIAGG-LPLSAITGRADLLDAVHPGGLGGTYGGNPVACA 333
Query: 377 -------TYSGHPVSC-AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR 428
                  T   H ++  A  IE L + K R +  +++                 ++G+IR
Sbjct: 334 AALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSA------------GGGSVVGDIR 381
Query: 429 GTGLILGTEFAD--NKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDNIMMSPPFI 483
           G G +L  E     +K PN              A C K G+++      G+ I + PP +
Sbjct: 382 GRGAMLAIELVQPGSKEPNAELT------KAVAAACLKEGVIILTCGTYGNVIRLLPPLV 435
Query: 484 MSPEEVDELISKYGKALKA 502
           +S E + + +     A+KA
Sbjct: 436 ISDELLIDGLEVLAAAIKA 454

>pdb|3Q8N|A Chain A, Crystal Structure Of 4-Aminobutyrate Transaminase From Mycobacterium Smegmatis Length = 453

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/416 (23%), Positives = 175/416 (42%), Gaps = 33/416 (7%)
Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           P+ +  + G  + D +G + +D  +G+  T +G S P +V A T Q+    F H+ +  T
Sbjct: 51  PVYVVAAGGGVLADADGNQLIDFGSGIAVTTVGNSAPAVVDAVTQQVAA--FTHTCFMVT 108
Query: 143 T-KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
             +  + +A+ L  +       +    NSG+EA +  VK+   Y        ++  +   
Sbjct: 109 PYEGYVKVAEHLNRLTPGDHEKRTALFNSGAEAVENAVKIARAYTR------RQAVVVFD 162
Query: 202 KSYHGSTLIAASLSGLPALHQKFDLP-APFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260
            +YHG T +  +++   A +Q +     PF       +    ++P    E      A + 
Sbjct: 163 HAYHGRTNLTMAMT---AKNQPYKHGFGPFANEV---YRVPTSYPFRDGETDGAAAAAHA 216
Query: 261 EDLILKE-GPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGR 319
            DLI K+ G + +AA + E              +   +Q        +F+ADEV   F R
Sbjct: 217 LDLINKQVGADNVAAVVIEPVHGEGGFVVPAPGFLGALQKWCTDNGAVFVADEVQTGFAR 276
Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
            G +F C+  ++ PDL+  AK ++   +P+ A+    E+ +   S            TY 
Sbjct: 277 TGALFACEHENVVPDLIVTAKGIAGG-LPLSAVTGRAEIMDGPQSGGLGG-------TYG 328
Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEF 438
           G+P++CA A+  +   +  N+V +   I       + A + + P IGE+RG G ++  E 
Sbjct: 329 GNPLACAAALAVIDTIERENLVARARAIGETMLSRLGALAAADPRIGEVRGRGAMIAVEL 388
Query: 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIM-MSPPFIMSPEEVDE 491
               +      P+  +     A     G++V   G   N++   PP  M    +DE
Sbjct: 389 VKPGTTE----PDADLTKRVAAAAHAQGLVVLTCGTYGNVLRFLPPLSMPDHLLDE 440

>pdb|3L44|A Chain A, Crystal Structure Of Bacillus Anthracis Heml-1, Glutamate Semialdehyde Aminotransferase Length = 434

Iteration: 1
 Score = 89.4 bits (220), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 139/337 (41%), Gaps = 38/337 (11%)
Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           P+  E+ +G+Y +DV+G KY+D LA       G + P +  A T        Y +     
Sbjct: 38  PIAXERGKGAYFWDVDGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVLYGT----P 93
Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
           T   +  AK L E   A  + KV F NSG+EA  T +++   Y    GR    KF     
Sbjct: 94  TALEVKFAKXLKEAXPA--LDKVRFVNSGTEAVXTTIRVARAYT---GRTKIXKFAG--- 145
Query: 203 SYHGST--LIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260
            YHG +  ++ A+ SG            P  L T          P    +E  T   NN+
Sbjct: 146 CYHGHSDLVLVAAGSG------------PSTLGTPD----SAGVPQSIAQEVITVPFNNV 189
Query: 261 EDL--ILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFG 318
           E L   L +    +AA + E              + EKV  +V +   L I DEVI AF 
Sbjct: 190 ETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF- 248
Query: 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 378
           R       D   + PDL +    +    +PIGA     E+ E    Q   LG      T 
Sbjct: 249 RFXYGGAQDLLGVTPDLTALGXVIGGG-LPIGAYGGKKEIXE----QVAPLGPAYQAGTX 303
Query: 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV 415
           +G+P S A  I  L++ ++  + E+++++    + G+
Sbjct: 304 AGNPASXASGIACLEVLQQEGLYEKLDELGATLEKGI 340

>pdb|3FQA|A Chain A, Gabaculien Complex Of Gabaculine Resistant Gsam Version Length = 427

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 82/352 (23%), Positives = 149/352 (42%), Gaps = 46/352 (13%)
Query: 76  WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPF 134
           ++S    P+V ++ + +Y +DV+G +Y+D + G W  A+ G + P ++ A    +     
Sbjct: 28  FKSVGGQPIVFDRVKDAYAWDVDGNRYIDYV-GTWGPAICGHAHPEVIEALKVAMEK--- 83
Query: 135 YHSFWNRTTKPSLDLAKELLEMFTAS--KMAKVFFTNSGSEANDTQVKLVWYYNNALGRP 192
                  +      L   L EM   +   +  V F NSG+EA    ++L+  Y       
Sbjct: 84  -----GTSFGAPCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRLMRAYT------ 132
Query: 193 NKKKFIARQKSYHG--STLIAASLSGLPALHQKFDLP-APFVLHTDCPHYWRYAHPGETE 249
            + K I  +  YHG     +  + SG+  L     LP +P V             P +T 
Sbjct: 133 GRDKIIKFEGCYHGHADMFLVKAGSGVATL----GLPSSPGV-------------PKKTT 175
Query: 250 EEYSTRLANNLEDL--ILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDIL 307
               T   N+LE +  +  E P  IA  I E              + E ++ +  ++D L
Sbjct: 176 ANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDAL 235
Query: 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN 367
            + DEVI  F R+      +K+ + PDL +  K +    +P+GA     E+ +++     
Sbjct: 236 LVFDEVITGF-RIAYGGVQEKFGVTPDLTTLGKIIGGG-LPVGAYGGKREIMQLVAPA-- 291
Query: 368 TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS 419
             G      T SG+P++    I+ L++ ++    E +++I  +  DG+ A +
Sbjct: 292 --GPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIA 341

>pdb|2CFB|A Chain A, Glutamate-1-Semialdehyde 2,1-Aminomutase From Thermosynechococcus Elongatus Length = 411

Iteration: 1
 Score = 82.0 bits (201), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 84/347 (24%), Positives = 149/347 (42%), Gaps = 44/347 (12%)
Query: 76  WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTAL-GGSEPRLVAAATAQLNTLPF 134
           ++S    P+V +  +G++++DV+G +Y+D + G W  A+ G + P ++ A  A L     
Sbjct: 12  FKSVGGQPIVFDHVKGAHIWDVDGNQYIDYV-GSWGPAIVGHAHPEVIDALHAALEKGTS 70
Query: 135 YHSFWNRTTKPSLDLAKELLEMFTAS--KMAKVFFTNSGSEANDTQVKLVWYYNNALGRP 192
           + +       P L L   L EM  A+   +  V F NSG+EA    ++L+  Y       
Sbjct: 71  FGA-------PCL-LENILAEMVIAAVPSVEMVRFVNSGTEACMAVLRLMRAYT------ 116
Query: 193 NKKKFIARQKSYHG--STLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 250
            ++K I  +  YHG     +  + SG+  L     LP       D P   +         
Sbjct: 117 QREKVIKFEGCYHGHADMFLVKAGSGVATL----GLP-------DSPGVPKATTAATLTA 165
Query: 251 EYSTRLANNLEDL--ILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILF 308
            Y     N+LE +  + ++ P  IA  I E              + E ++ + K+Y  L 
Sbjct: 166 PY-----NDLEAVSRLFEQYPNDIAGVILEPVVGNAGFIPPDAGFLEGLRELTKQYGALL 220
Query: 309 IADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT 368
           + DEV+  F R+      +K+ + PDL +  K +    +P+GA     E+ +++      
Sbjct: 221 VFDEVMTGF-RIAYGGAQEKFGVTPDLTTLGKVIGGG-LPVGAYGGRAEIMKMVAPA--- 275
Query: 369 LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV 415
            G      T SG+P++    I+ L+I       E +++I  K   G+
Sbjct: 276 -GPVYQAGTLSGNPLAMTAGIKTLEILSRPGSYEHLDRITGKLVQGL 321

>pdb|3FQ8|A Chain A, M248i Mutant Of Gsam Length = 427

Iteration: 1
 Score = 81.6 bits (200), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 149/352 (42%), Gaps = 46/352 (13%)
Query: 76  WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPF 134
           ++S    P+V ++ + +Y +DV+G +Y+D + G W  A+ G + P ++ A    +     
Sbjct: 28  FKSVGGQPIVFDRVKDAYAWDVDGNRYIDYV-GTWGPAICGHAHPEVIEALKVAMEK--- 83
Query: 135 YHSFWNRTTKPSLDLAKELLEMFTAS--KMAKVFFTNSGSEANDTQVKLVWYYNNALGRP 192
                  +      L   L EM   +   +  V F NSG+EA    ++++  Y       
Sbjct: 84  -----GTSFGAPCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRAYT------ 132
Query: 193 NKKKFIARQKSYHG--STLIAASLSGLPALHQKFDLP-APFVLHTDCPHYWRYAHPGETE 249
            + K I  +  YHG     +  + SG+  L     LP +P V             P +T 
Sbjct: 133 GRDKIIKFEGCYHGHADMFLVKAGSGVATL----GLPSSPGV-------------PKKTT 175
Query: 250 EEYSTRLANNLEDL--ILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDIL 307
               T   N+LE +  +  E P  IA  I E              + E ++ +  ++D L
Sbjct: 176 ANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDAL 235
Query: 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN 367
            + DEVI  F R+      +K+ + PDL +  K +    +P+GA     E+ +++     
Sbjct: 236 LVFDEVITGF-RIAYGGVQEKFGVTPDLTTLGKIIGGG-LPVGAYGGKREIMQLVAPA-- 291
Query: 368 TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS 419
             G      T SG+P++    I+ L++ ++    E +++I  +  DG+ A +
Sbjct: 292 --GPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIA 341

>pdb|2GSA|A Chain A, Crystal Structure Of Glutamate-1-Semialdehyde Aminomutase (Aminotransferase, Wild-Type Form) Length = 432

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/352 (23%), Positives = 149/352 (42%), Gaps = 46/352 (13%)
Query: 76  WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPF 134
           ++S    P+V ++ + +Y +DV+G +Y+D + G W  A+ G + P ++ A    +     
Sbjct: 33  FKSVGGQPIVFDRVKDAYAWDVDGNRYIDYV-GTWGPAICGHAHPEVIEALKVAMEK--- 88
Query: 135 YHSFWNRTTKPSLDLAKELLEMFTAS--KMAKVFFTNSGSEANDTQVKLVWYYNNALGRP 192
                  +      L   L EM   +   +  V F NSG+EA    ++L+  Y       
Sbjct: 89  -----GTSFGAPCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRLMRAYT------ 137
Query: 193 NKKKFIARQKSYHG--STLIAASLSGLPALHQKFDLP-APFVLHTDCPHYWRYAHPGETE 249
            + K I  +  YHG     +  + SG+  L     LP +P V             P +T 
Sbjct: 138 GRDKIIKFEGCYHGHADMFLVKAGSGVATL----GLPSSPGV-------------PKKTT 180
Query: 250 EEYSTRLANNLEDL--ILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDIL 307
               T   N+LE +  +  E P  IA  I E              + E ++ +  ++D L
Sbjct: 181 ANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDAL 240
Query: 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN 367
            + DEV+  F R+      +K+ + PDL +  K +    +P+GA     E+ +++     
Sbjct: 241 LVFDEVMTGF-RIAYGGVQEKFGVTPDLTTLGKIIGGG-LPVGAYGGKREIMQLVAPA-- 296
Query: 368 TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS 419
             G      T SG+P++    I+ L++ ++    E +++I  +  DG+ A +
Sbjct: 297 --GPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIA 346

>pdb|3FQ7|A Chain A, Gabaculine Complex Of Gsam Length = 427

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/352 (22%), Positives = 149/352 (42%), Gaps = 46/352 (13%)
Query: 76  WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPF 134
           ++S    P+V ++ + +Y +DV+G +Y+D + G W  A+ G + P ++ A    +     
Sbjct: 28  FKSVGGQPIVFDRVKDAYAWDVDGNRYIDYV-GTWGPAICGHAHPEVIEALKVAMEK--- 83
Query: 135 YHSFWNRTTKPSLDLAKELLEMFTAS--KMAKVFFTNSGSEANDTQVKLVWYYNNALGRP 192
                  +      L   L EM   +   +  V F NSG+EA    ++++  Y       
Sbjct: 84  -----GTSFGAPCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRAYT------ 132
Query: 193 NKKKFIARQKSYHG--STLIAASLSGLPALHQKFDLP-APFVLHTDCPHYWRYAHPGETE 249
            + K I  +  YHG     +  + SG+  L     LP +P V             P +T 
Sbjct: 133 GRDKIIKFEGCYHGHADMFLVKAGSGVATL----GLPSSPGV-------------PKKTT 175
Query: 250 EEYSTRLANNLEDL--ILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDIL 307
               T   N+LE +  +  E P  IA  I E              + E ++ +  ++D L
Sbjct: 176 ANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDAL 235
Query: 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN 367
            + DEV+  F R+      +K+ + PDL +  K +    +P+GA     E+ +++     
Sbjct: 236 LVFDEVMTGF-RIAYGGVQEKFGVTPDLTTLGKIIGGG-LPVGAYGGKREIMQLVAPA-- 291
Query: 368 TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS 419
             G      T SG+P++    I+ L++ ++    E +++I  +  DG+ A +
Sbjct: 292 --GPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIA 341

>pdb|2HOY|A Chain A, Inter-Subunit Signaling In Gsam Length = 432

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/352 (22%), Positives = 149/352 (42%), Gaps = 46/352 (13%)
Query: 76  WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPF 134
           ++S    P+V ++ + +Y +DV+G +Y+D + G W  A+ G + P ++ A    +     
Sbjct: 33  FKSVGGQPIVFDRVKDAYAWDVDGNRYIDYV-GTWGPAICGHAHPEVIEALKVAMEK--- 88
Query: 135 YHSFWNRTTKPSLDLAKELLEMFTAS--KMAKVFFTNSGSEANDTQVKLVWYYNNALGRP 192
                  +      L   L EM   +   +  V F NSG+EA    ++++  Y       
Sbjct: 89  -----GTSFGAPCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRAYT------ 137
Query: 193 NKKKFIARQKSYHG--STLIAASLSGLPALHQKFDLP-APFVLHTDCPHYWRYAHPGETE 249
            + K I  +  YHG     +  + SG+  L     LP +P V             P +T 
Sbjct: 138 GRDKIIKFEGCYHGHADMFLVKAGSGVATL----GLPSSPGV-------------PKKTT 180
Query: 250 EEYSTRLANNLEDL--ILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDIL 307
               T   N+LE +  +  E P  IA  I E              + E ++ +  ++D L
Sbjct: 181 ANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDAL 240
Query: 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN 367
            + DEV+  F R+      +K+ + PDL +  K +    +P+GA     E+ +++     
Sbjct: 241 LVFDEVMTGF-RIAYGGVQEKFGVTPDLTTLGKIIGGG-LPVGAYGGKREIMQLVAPA-- 296
Query: 368 TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS 419
             G      T SG+P++    I+ L++ ++    E +++I  +  DG+ A +
Sbjct: 297 --GPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIA 346

>pdb|3DXW|A Chain A, The Crystal Structure Of Alpha-Amino-Epsilon-Caprolactam Racemase From Achromobacter Obae Complexed With Epsilon Caprolactam Length = 452

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 98/424 (23%), Positives = 172/424 (40%), Gaps = 23/424 (5%)
Query: 77  QSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYH 136
           Q     PL I    G+ + + NG++ +D L+G W  A  G     + AA +     P   
Sbjct: 33  QKLRFFPLAISGGRGARLIEENGRELID-LSGAWGAASLGYGHPAIVAAVSAAAANPAGA 91
Query: 137 SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 196
           +  + +  P++ LA+ LL  F      K++F +SGS+AN+   + +     A GR     
Sbjct: 92  TILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIV---KATGRSG--- 145
Query: 197 FIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 256
            IA   +YHG T+ + + SG     Q     A  ++    P  +R      T +   T L
Sbjct: 146 VIAFAGAYHGCTVGSMAFSGHSV--QADAAKADGLILLPYPDPYRPYRNDPTGDAILTLL 203
Query: 257 ANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICA 316
               E L         AAFI E              +  K   + + + IL + DEV   
Sbjct: 204 T---EKLAAVPAGSIGAAFI-EPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVG 259
Query: 317 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF 376
             R G +   +     PD++   K L        + +++P  +E++   S    +F+   
Sbjct: 260 LARSGRLHCFEHEGFVPDILVLGKGLGGGLPL--SAVIAP--AEILDCAS----AFAMQ- 310
Query: 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILG 435
           T  G+P+S A  +  L+     ++     +     +DG+   +   P+IG+IRG GL  G
Sbjct: 311 TLHGNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACG 370
Query: 436 TEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISK 495
            E   ++   EP   E     Y   Q       V ++G+ +  +PP  ++  ++ + +  
Sbjct: 371 MELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGMNGNVLEFTPPLTITETDIHKALDL 430
Query: 496 YGKA 499
             +A
Sbjct: 431 LDRA 434

>pdb|2ZUK|A Chain A, The Crystal Structure Of Alpha-Amino-Epsilon-Caprolactam Racemase From Achromobacter Obae Complexed With Epsilon Caprolactam (Different Binding Mode) Length = 439

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 98/424 (23%), Positives = 172/424 (40%), Gaps = 23/424 (5%)
Query: 77  QSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYH 136
           Q     PL I    G+ + + NG++ +D L+G W  A  G     + AA +     P   
Sbjct: 20  QKLRFFPLAISGGRGARLIEENGRELID-LSGAWGAASLGYGHPAIVAAVSAAAANPAGA 78
Query: 137 SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 196
           +  + +  P++ LA+ LL  F      K++F +SGS+AN+   + +     A GR     
Sbjct: 79  TILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIV---KATGRSG--- 132
Query: 197 FIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 256
            IA   +YHG T+ + + SG     Q     A  ++    P  +R      T +   T L
Sbjct: 133 VIAFAGAYHGCTVGSMAFSGHSV--QADAAKADGLILLPYPDPYRPYRNDPTGDAILTLL 190
Query: 257 ANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICA 316
               E L         AAFI E              +  K   + + + IL + DEV   
Sbjct: 191 T---EKLAAVPAGSIGAAFI-EPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVG 246
Query: 317 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF 376
             R G +   +     PD++   K L        + +++P  +E++   S    +F+   
Sbjct: 247 LARSGRLHCFEHEGFVPDILVLGKGLGGGLPL--SAVIAP--AEILDCAS----AFAMQ- 297
Query: 377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILG 435
           T  G+P+S A  +  L+     ++     +     +DG+   +   P+IG+IRG GL  G
Sbjct: 298 TLHGNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACG 357
Query: 436 TEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISK 495
            E   ++   EP   E     Y   Q       V ++G+ +  +PP  ++  ++ + +  
Sbjct: 358 MELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGMNGNVLEFTPPLTITETDIHKALDL 417
Query: 496 YGKA 499
             +A
Sbjct: 418 LDRA 421

>pdb|2EPJ|A Chain A, Crystal Structure Of Glutamate-1-Semialdehyde 2,1-Aminomutase From Aeropyrum Pernix Length = 434

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 132/324 (40%), Gaps = 40/324 (12%)
Query: 82  HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNR 141
           +P  +++ EG+Y+Y V+G + +D +       LG   PR++ A    L     Y +    
Sbjct: 38  YPFYVKRGEGAYLYTVDGARIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLYGA---- 93
Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
             +  + LA+++L       M +  F NSG+EA  T ++L   Y    GR    KF    
Sbjct: 94  PGEAEVLLAEKILGYVKRGGMIR--FVNSGTEATMTAIRLARGYT---GRDLILKFDGCY 148
Query: 202 KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA---N 258
              H + L+AA                     +   HY      G  E      L    N
Sbjct: 149 HGSHDAVLVAAG--------------------SAAAHYGVPTSAGVPEAVARLTLVTPYN 188
Query: 259 NLEDL--ILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICA 316
           ++E L  +  E  + IA  I E              +   +Q + ++   L I DEV+  
Sbjct: 189 DVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTG 248
Query: 317 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF 376
           F RLG       ++I+ D++   K +   + P+GA+  S EV  ++  Q      F+ G 
Sbjct: 249 F-RLGLEGAQGYFNIEGDIIVLGKIIGGGF-PVGAVAGSREVMSLLTPQGKV---FNAG- 302
Query: 377 TYSGHPVSCAVAIEALKIYKERNI 400
           T++ HP++ A  +  LK  +E  +
Sbjct: 303 TFNAHPITMAAGLATLKALEEEPV 326

>pdb|3BS8|A Chain A, Crystal Structure Of Glutamate 1-Semialdehyde Aminotransferase Complexed With Pyridoxamine-5'-Phosphate From Bacillus Subtilis Length = 438

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 141/322 (43%), Gaps = 38/322 (11%)
Query: 76  WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY 135
           ++S D+ P+ +E+ +GS ++D++G +Y+D +       LG +  R+V +    L  +  Y
Sbjct: 37  FKSVDMDPIFMERGKGSKIFDIDGNEYIDYVLSWGPLILGHTNDRVVES----LKKVAEY 92
Query: 136 HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 195
            + +   T+   +LAK +++   + ++ ++   +SG+EA  + ++L      A G   + 
Sbjct: 93  GTSFGAPTEVENELAKLVIDRVPSVEIVRM--VSSGTEATMSALRL------ARGYTGRN 144
Query: 196 KFIARQKSY--HGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS 253
           K +  +  Y  HG +L+  + SG+  L     LP       D P       P    +   
Sbjct: 145 KILKFEGCYHGHGDSLLIKAGSGVATL----GLP-------DSP-----GVPEGIAKNTI 188
Query: 254 TRLANNLED--LILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIAD 311
           T   N+LE   L  ++  E IA  I E              + + ++ + ++Y  L I D
Sbjct: 189 TVPYNDLESVKLAFQQFGEDIAGVIVEPVAGNMGVVPPQEGFLQGLRDITEQYGSLLIFD 248
Query: 312 EVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS 371
           EV+  F R+        + + PDL    K +    +P+GA     E+ E I       G 
Sbjct: 249 EVMTGF-RVDYNCAQGYFGVTPDLTCLGKVIGGG-LPVGAYGGKAEIMEQIAPS----GP 302
Query: 372 FSHGFTYSGHPVSCAVAIEALK 393
                T SG+P++    +E LK
Sbjct: 303 IYQAGTLSGNPLAMTAGLETLK 324

>pdb|2E7U|A Chain A, Crystal Structure Of Glutamate-1-Semialdehyde 2,1-Aminomutase From Thermus Thermophilus Hb8 Length = 424

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 86/329 (26%), Positives = 133/329 (40%), Gaps = 59/329 (17%)
Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNT-LPFYHSFWNR 141
           P  + + EG+YV+D +G +YLD +       LG + P+++A     L   L F       
Sbjct: 35  PPFLVRGEGAYVWDADGNRYLDYVMSWGPLILGHAHPKVLARVRETLERGLTF-----GA 89
Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
            +   + LAK++   +    + +  F NSG+EA  + ++L   Y    GRP   KF   +
Sbjct: 90  PSPLEVALAKKVKRAYPFVDLVR--FVNSGTEATMSALRLARGYT---GRPYIVKF---R 141
Query: 202 KSYHGS-------------TLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET 248
            +YHG              TL   S +G+P  + K  L    VL  + P   R       
Sbjct: 142 GNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTL----VLEYNDPEGLRE------ 191
Query: 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILF 308
                          +LK   E IAA I E              + + +    K Y +L 
Sbjct: 192 ---------------VLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHE-AKAYGVLL 235
Query: 309 IADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT 368
           IADEV+  F RL      +   +KPDLV+  K L    +P  A     E+ E +      
Sbjct: 236 IADEVMTGF-RLAFGGATELLGLKPDLVTLGKILGGG-LPAAAYAGRREIMEKV----AP 289
Query: 369 LGSFSHGFTYSGHPVSCAVAIEALKIYKE 397
           LG      T SG+P++ A  +  L++ +E
Sbjct: 290 LGPVYQAGTLSGNPLAMAAGLATLELLEE 318

>pdb|4E77|A Chain A, 2.0a Crystal Structure Of A Glutamate-1-Semialdehyde Aminotransferase From Yersinia Pestis Co92 Length = 429

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 80/338 (23%), Positives = 133/338 (39%), Gaps = 38/338 (11%)
Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           PL IE+++G+Y++DV+GK Y+D +       LG + P   A   A +  +    SF    
Sbjct: 36  PLFIERADGAYLFDVDGKAYIDYVGSWGPXILGHNHP---AIRQAVIEAVERGLSF-GAP 91
Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
           T+  +  A+ + ++       +    NSG+EA  + ++L      A G   + K I  + 
Sbjct: 92  TEXEVKXAQLVTDLVPTXDXVRX--VNSGTEATXSAIRL------ARGYTGRDKIIKFEG 143
Query: 203 SYHG--STLIAASLSGLPALHQKFD--LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258
            YHG    L+  + SG   L Q     +P  F  HT    Y   A   +  E+Y      
Sbjct: 144 CYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQY------ 197
Query: 259 NLEDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFG 318
                     P+ +A  I E              +   ++A+  ++  L I DEV   F 
Sbjct: 198 ----------PQEVACIIVEPVAGNXNCIPPLPEFLPGLRALCDEFGALLIIDEVXTGF- 246
Query: 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 378
           R+      D Y + PDL    K +     P+GA     EV   +       G      T 
Sbjct: 247 RVALAGAQDYYHVIPDLTCLGKIIGGG-XPVGAFGGRREVXNALAPT----GPVYQAGTL 301
Query: 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK 416
           SG+P++ A     L    +  + E + ++      G++
Sbjct: 302 SGNPIAXAAGFACLTEISQVGVYETLTELTDSLATGLR 339

>pdb|3K28|A Chain A, Crystal Structure Of A Glutamate-1-Semialdehyde Aminotransferase From Bacillus Anthracis With Bound Pyridoxal 5'phosphate Length = 429

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 149/368 (40%), Gaps = 36/368 (9%)
Query: 76  WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY 135
           ++S   +PL  E+ +GS VYD++G +Y+D +        G +  R+V A    L  +   
Sbjct: 29  FKSVGXNPLFXERGKGSKVYDIDGNEYIDYVLSWGPLIHGHANDRVVEA----LKAVAER 84
Query: 136 HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 195
            + +   T+    LAK ++E   + ++ +    NSG+EA  + ++L   Y    GR    
Sbjct: 85  GTSFGAPTEIENKLAKLVIERVPSIEIVRX--VNSGTEATXSALRLARGYT---GRNKIL 139
Query: 196 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255
           KFI      HG +L+  + SG+  L     LP       D P       P    +   T 
Sbjct: 140 KFIGCYHG-HGDSLLIKAGSGVATL----GLP-------DSP-----GVPEGVAKNTITV 182
Query: 256 LANNLEDL--ILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEV 313
             N+LE +    ++  + IA  I E              + E ++ V ++   L I DEV
Sbjct: 183 AYNDLESVKYAFEQFGDDIACVIVEPVAGNXGVVPPQPGFLEGLREVTEQNGALLIFDEV 242
Query: 314 ICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS 373
              F R+    G   Y + PDL    K +    +P+GA     E    I  Q    G   
Sbjct: 243 XTGF-RVAYNCGQGYYGVTPDLTCLGKVIGGG-LPVGAYGGKAE----IXRQVAPSGPIY 296
Query: 374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV-KAFSDSPIIGEIRGTGL 432
              T SG+P++ A   E L      + VE   K A   + G+ KA     I   I   G 
Sbjct: 297 QAGTLSGNPLAXAAGYETLVQLTPESYVEFERK-AEXLEAGLRKAAEKHGIPHHINRAGS 355
Query: 433 ILGTEFAD 440
            +G  F D
Sbjct: 356 XIGIFFTD 363

>pdb|2CY8|A Chain A, Crystal Structure Of D-Phenylglycine Aminotransferase (D-Phgat) From Pseudomonas Strutzeri St-201 Length = 453

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 146/341 (42%), Gaps = 41/341 (12%)
Query: 73  TAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTL 132
           TA  ++ D H L I  ++G +  DV+G  YLD   G     LG   PR+ AA    L+  
Sbjct: 30  TADTRAFDPHGLFISDAQGVHKTDVDGNVYLDFFGGHGALVLGHGHPRVNAAIAEALS-- 87
Query: 133 PFYHSFWNRTTKP-SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR 191
              H      + P  +  A+ ++  F + +  K+ FT SG+E     +++   +      
Sbjct: 88  ---HGVQYAASHPLEVRWAERIVAAFPSIR--KLRFTGSGTETTLLALRVARAFTG---- 138
Query: 192 PNKKKFIAR-QKSYHGSTLIAASLSGLPALHQKFD-LPAPFVLHTDCPHYWRYAHPGETE 249
              ++ I R +  YHG    +AS       +  FD  PAP VL            P  T 
Sbjct: 139 ---RRMILRFEGHYHGWHDFSAS-----GYNSHFDGQPAPGVL------------PETTA 178
Query: 250 EEYSTRLANNLEDL--ILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDIL 307
                R  +++E +  +       IAAFIAE             ++  +   + ++Y  L
Sbjct: 179 NTLLIR-PDDIEGMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGAL 237
Query: 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN 367
           FI DEVI  F R+G         ++PDL   AKA S+  +P G +    +V  V+   S+
Sbjct: 238 FILDEVISGF-RVGNHGMQALLDVQPDLTCLAKA-SAGGLPGGILGGREDVMGVLSRGSD 295
Query: 368 TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIA 408
                 H  T++G+P++ A AI A+    E ++  ++N + 
Sbjct: 296 R--KVLHQGTFTGNPITAAAAIAAIDTILEDDVCAKINDLG 334

>pdb|4A0G|A Chain A, Structure Of Bifunctional Dapa Aminotransferase-Dtb Synthetase From Arabidopsis Thaliana In Its Apo Form. Length = 831

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 91/407 (22%), Positives = 155/407 (38%), Gaps = 55/407 (13%)
Query: 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWY-----YNNALGRPNKK--- 195
           +P+L  A+ LL+       ++V+F+++GS A +  +K+ +      +N       +K   
Sbjct: 424 EPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIV 483
Query: 196 -KFIARQKSYHGSTLIAASLSGLPALHQKF-------------DLPAPFVLHTD------ 235
            K IA + SYHG TL A      P+ +  F             D P  F+ +        
Sbjct: 484 VKVIALRGSYHGDTLGAMEAQA-PSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLP 542
Query: 236 ------CPHYWRYAHPGETEEE----------YSTRLANNLEDLILKEGPETIAAFIAEX 279
                  P Y  +    E  ++          YS  L+ +L++         + A I E 
Sbjct: 543 ESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEP 602
Query: 280 XXXXXXXXXXXXTYFEKVQA-VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF 338
                         F++V     +   I  I DEV   F RLG     +    KPD+  F
Sbjct: 603 VIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIACF 662
Query: 339 AKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE- 397
           AK L+   +P+   L +  V +     S  L +  HG +YS H + CA A +A++ +K+ 
Sbjct: 663 AKLLTGGMVPLAVTLATDAVFDSFSGDSK-LKALLHGHSYSAHAMGCATAAKAIQWFKDP 721
Query: 398 ---RNIVEQVNKIAPKF-QDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWG 453
               NI  Q   +   + ++ V+  S    +  +   G +   E   + S N  +   + 
Sbjct: 722 ETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVIGTLFALELKADAS-NSGYASLYA 780
Query: 454 IGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKAL 500
                     + G+  R  G+ I +      SPE    L++K  K L
Sbjct: 781 KSLLI--MLREDGIFTRPLGNVIYLMCGPCTSPEICRRLLTKLYKRL 825

>pdb|2JJH|A Chain A, E243 Mutant Of M. Tuberculosis Rv3290c Length = 449

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 93/440 (21%), Positives = 172/440 (39%), Gaps = 54/440 (12%)
Query: 84  LVIEKSEGSYVYD-VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           L + +S GSY+ D + G++YLD    +  +ALG + P LV         +    +  + +
Sbjct: 37  LDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNS 96
Query: 143 TKPSLDLAKELLEMFTA----SKMAKVFFTNSGSEANDTQVKLVWYYNN----------A 188
              S+ +A+  +E F        +  +FF   G+ A +  +K  + + +          A
Sbjct: 97  DVYSVAMAR-FVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPA 155
Query: 189 LGRPNKKKFIARQKSYHGSTLIAASLSG----LPALHQKFDLPAPFVLHTDCPHYWRYAH 244
           LG     + +  + ++HG +    SL+     + A   KFD P       D P    Y  
Sbjct: 156 LG----TQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWP-----RIDAP----YMR 202
Query: 245 PGETEEEYSTRLANNLEDL--ILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVK 302
           PG  E   +   A  L       +  P  IA F+AE              +F  ++ +  
Sbjct: 203 PGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGAGGDRHFRPEFFAAMRELCD 262
Query: 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVI 362
           ++D L I DEV    G  GT +   +  + PD+V+F K      +  G  +   EV++ +
Sbjct: 263 EFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKTQVCGVMAGRRV--DEVADNV 320
Query: 363 HSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDS 421
            +  + L S     T+ G+      A   L++ +   + E+  +     +  +    +D 
Sbjct: 321 FAVPSRLNS-----TWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADF 375
Query: 422 P-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSP 480
           P ++ + RG GL+           +E     W          ++  +++    D +   P
Sbjct: 376 PAVVLDPRGRGLMCAFSLPTTADRDELIRQLW----------QRAVIVLPAGADTVRFRP 425
Query: 481 PFIMSPEEVDELISKYGKAL 500
           P  +S  E+D  I+    AL
Sbjct: 426 PLTVSTAEIDAAIAAVRSAL 445

>pdb|4A0F|A Chain A, Structure Of Selenomethionine Substituted Bifunctional Dapa Aminotransferase-Dethiobiotin Synthetase From Arabidopsis Thaliana In Its Apo Form. Length = 831

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 157/407 (38%), Gaps = 55/407 (13%)
Query: 144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWY-----YNNALGRPNKK--- 195
           +P+L  A+ LL+       ++V+F+++GS A +  +K  +      +N       +K   
Sbjct: 424 EPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALKXAFRKFCVDHNFCEATEEEKHIV 483
Query: 196 -KFIARQKSYHGSTLIAASLSGLPALHQKF-------------DLPAPFVLHTD------ 235
            K IA + SYHG TL  A  +  P+ +  F             D P  F+ +        
Sbjct: 484 VKVIALRGSYHGDTL-GAXEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLP 542
Query: 236 ------CPHYWRYAHPGETEEE----------YSTRLANNLEDLILKEGPETIAAFIAEX 279
                  P Y  +    E  ++          YS  L+ +L++         + A I E 
Sbjct: 543 ESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEP 602
Query: 280 XXXXXXXXXXXXTYFEKVQA-VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF 338
                         F++V     +   I  I DEV   F RLG     +    KPD+  F
Sbjct: 603 VIHGAGGXHXVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCKPDIACF 662
Query: 339 AKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE- 397
           AK L+   +P+   L +  V +     S  L +  HG +YS H   CA A +A++ +K+ 
Sbjct: 663 AKLLTGGXVPLAVTLATDAVFDSFSGDSK-LKALLHGHSYSAHAXGCATAAKAIQWFKDP 721
Query: 398 ---RNIVEQVNKIAPKF-QDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWG 453
               NI  Q   +   + ++ V+  S    +  +   G +   E   + S N  +   + 
Sbjct: 722 ETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVIGTLFALELKADAS-NSGYASLYA 780
Query: 454 IGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKAL 500
                  +  + G+  R  G+ I +      SPE    L++K  K L
Sbjct: 781 KSLLIXLR--EDGIFTRPLGNVIYLXCGPCTSPEICRRLLTKLYKRL 825

>pdb|2JJF|A Chain A, N328a Mutant Of M. Tuberculosis Rv3290c Length = 449

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 93/440 (21%), Positives = 172/440 (39%), Gaps = 54/440 (12%)
Query: 84  LVIEKSEGSYVYD-VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           L + +S GSY+ D + G++YLD    +  +ALG + P LV         +    +  + +
Sbjct: 37  LDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNS 96
Query: 143 TKPSLDLAKELLEMFTA----SKMAKVFFTNSGSEANDTQVKLVWYYNN----------A 188
              S+ +A+  +E F        +  +FF   G+ A +  +K  + + +          A
Sbjct: 97  DVYSVAMAR-FVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPA 155
Query: 189 LGRPNKKKFIARQKSYHGSTLIAASLSG----LPALHQKFDLPAPFVLHTDCPHYWRYAH 244
           LG     + +  + ++HG +    SL+     + A   KFD P       D P    Y  
Sbjct: 156 LG----TQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWP-----RIDAP----YMR 202
Query: 245 PGETEEEYSTRLANNLEDL--ILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVK 302
           PG  E   +   A  L       +  P  IA F+AE              +F  ++ +  
Sbjct: 203 PGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCD 262
Query: 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVI 362
           ++D L I DEV    G  GT +   +  + PD+V+F K      +  G  +   EV++ +
Sbjct: 263 EFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKTQVCGVMAGRRV--DEVADNV 320
Query: 363 HSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDS 421
            +  + L S     T+ G+      A   L++ +   + E+  +     +  +    +D 
Sbjct: 321 FAVPSRLAS-----TWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADF 375
Query: 422 P-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSP 480
           P ++ + RG GL+           +E     W          ++  +++    D +   P
Sbjct: 376 PAVVLDPRGRGLMCAFSLPTTADRDELIRQLW----------QRAVIVLPAGADTVRFRP 425
Query: 481 PFIMSPEEVDELISKYGKAL 500
           P  +S  E+D  I+    AL
Sbjct: 426 PLTVSTAEIDAAIAAVRSAL 445

>pdb|2CIN|A Chain A, Lysine Aminotransferase From M. Tuberculosis In The Internal Aldimine Form Length = 449

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 93/440 (21%), Positives = 172/440 (39%), Gaps = 54/440 (12%)
Query: 84  LVIEKSEGSYVYD-VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           L + +S GSY+ D + G++YLD    +  +ALG + P LV         +    +  + +
Sbjct: 37  LDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNS 96
Query: 143 TKPSLDLAKELLEMFTA----SKMAKVFFTNSGSEANDTQVKLVWYYNN----------A 188
              S+ +A+  +E F        +  +FF   G+ A +  +K  + + +          A
Sbjct: 97  DVYSVAMAR-FVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPA 155
Query: 189 LGRPNKKKFIARQKSYHGSTLIAASLSG----LPALHQKFDLPAPFVLHTDCPHYWRYAH 244
           LG     + +  + ++HG +    SL+     + A   KFD P       D P    Y  
Sbjct: 156 LG----TQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWP-----RIDAP----YMR 202
Query: 245 PGETEEEYSTRLANNLEDL--ILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVK 302
           PG  E   +   A  L       +  P  IA F+AE              +F  ++ +  
Sbjct: 203 PGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCD 262
Query: 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVI 362
           ++D L I DEV    G  GT +   +  + PD+V+F K      +  G  +   EV++ +
Sbjct: 263 EFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKTQVCGVMAGRRV--DEVADNV 320
Query: 363 HSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDS 421
            +  + L S     T+ G+      A   L++ +   + E+  +     +  +    +D 
Sbjct: 321 FAVPSRLNS-----TWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADF 375
Query: 422 P-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSP 480
           P ++ + RG GL+           +E     W          ++  +++    D +   P
Sbjct: 376 PAVVLDPRGRGLMCAFSLPTTADRDELIRQLW----------QRAVIVLPAGADTVRFRP 425
Query: 481 PFIMSPEEVDELISKYGKAL 500
           P  +S  E+D  I+    AL
Sbjct: 426 PLTVSTAEIDAAIAAVRSAL 445

>pdb|2JJE|A Chain A, Crystal Structure Of T330s Mutant Of Rv3290c From M. Tuberculosis Length = 449

Iteration: 1
 Score = 63.2 bits (152), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 92/440 (20%), Positives = 172/440 (39%), Gaps = 54/440 (12%)
Query: 84  LVIEKSEGSYVYD-VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           L + +S GSY+ D + G++YLD    +  +ALG + P LV         +    +  + +
Sbjct: 37  LDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNS 96
Query: 143 TKPSLDLAKELLEMFTA----SKMAKVFFTNSGSEANDTQVKLVWYYNN----------A 188
              S+ +A+  +E F        +  +FF   G+ A +  +K  + + +          A
Sbjct: 97  DVYSVAMAR-FVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPA 155
Query: 189 LGRPNKKKFIARQKSYHGSTLIAASLSG----LPALHQKFDLPAPFVLHTDCPHYWRYAH 244
           LG     + +  + ++HG +    SL+     + A   KFD P       D P    Y  
Sbjct: 156 LG----TQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWP-----RIDAP----YMR 202
Query: 245 PGETEEEYSTRLANNLEDL--ILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVK 302
           PG  E   +   A  L       +  P  IA F+AE              +F  ++ +  
Sbjct: 203 PGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCD 262
Query: 303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVI 362
           ++D L I DEV    G  GT +   +  + PD+V+F K      +  G  +   EV++ +
Sbjct: 263 EFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKTQVCGVMAGRRV--DEVADNV 320
Query: 363 HSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDS 421
            +  + L S     ++ G+      A   L++ +   + E+  +     +  +    +D 
Sbjct: 321 FAVPSRLNS-----SWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADF 375
Query: 422 P-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSP 480
           P ++ + RG GL+           +E     W          ++  +++    D +   P
Sbjct: 376 PAVVLDPRGRGLMCAFSLPTTADRDELIRQLW----------QRAVIVLPAGADTVRFRP 425
Query: 481 PFIMSPEEVDELISKYGKAL 500
           P  +S  E+D  I+    AL
Sbjct: 426 PLTVSTAEIDAAIAAVRSAL 445

>pdb|1OHV|A Chain A, 4-aminobutyrate-aminotransferase From Pig Length = 472

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 122/299 (40%), Gaps = 54/299 (18%)
Query: 87  EKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTT--- 143
           E+S G+Y+ DV+G + LD  + +    +G S P LV       N      +F NR     
Sbjct: 50  EESRGNYLVDVDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNV----STFINRPALGI 105
Query: 144 KPSLDLAKELLEMFTA---SKMAKVFFTNSGSEANDTQVKLV--WY-------------- 184
            P  +  ++L E   +     M+++     GS +N+   K +  WY              
Sbjct: 106 LPPENFVEKLRESLLSVAPKGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEE 165
Query: 185 -----YNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ----KFDLP-APFVLHT 234
                 N A G P+    ++   ++HG T+   + +   A+H+     FD P APF    
Sbjct: 166 LETCMINQAPGCPD-YSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFP--- 221
Query: 235 DCPHYWRYAHPGE----TEEEYSTRLANNLEDLILK--EGPETIAAFIAEXXXXXXXXXX 288
                 R  +P E      ++   R    +EDLI+K  +  +T+A  I E          
Sbjct: 222 ------RLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNH 275
Query: 289 XXXTYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK--PDLVSFAKALSSA 345
               +F K++ + +K+   F+ DEV    G  G  +  + + +    D+++F+K + + 
Sbjct: 276 ASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTG 334

>pdb|4AO9|A Chain A, Biochemical Properties And Crystal Structure Of A Novel Beta-phenylalanine Aminotransferase From Variovorax Paradoxus Length = 454

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 120/312 (38%), Gaps = 48/312 (15%)
Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           PL I + EG+ ++D +G +Y D +A       G S P +  A    +          N T
Sbjct: 70  PLTIARGEGAALWDADGHRYADFIAEYTAGVYGHSAPEIRDAVIEAM------QGGINLT 123
Query: 143 TKPSLD--LAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIAR 200
               L+  LA+ + E F   ++ ++ FTNSG+EAN   +    ++        ++K +  
Sbjct: 124 GHNLLEGRLARLICERF--PQIEQLRFTNSGTEANLMALTAALHFT------GRRKIVVF 175
Query: 201 QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260
              YHG  L      G  A      +P  F++    P+            +  T  A   
Sbjct: 176 SGGYHGGVL------GFGARPSPTTVPFDFLV---LPY-----------NDAQTARAQ-- 213
Query: 261 EDLILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGRL 320
              I + GPE IA  + E              + + ++    +   L + DEV+ +  RL
Sbjct: 214 ---IERHGPE-IAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RL 267
Query: 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG 380
                 +K  I+ DL +  K +    M  GA     +V  +   ++   G  +H  T++ 
Sbjct: 268 APHGLANKLGIRSDLTTLGKYIGGG-MSFGAFGGRADVMALFDPRT---GPLAHSGTFNN 323
Query: 381 HPVSCAVAIEAL 392
           + ++ A     L
Sbjct: 324 NVMTMAAGYAGL 335

>pdb|2YKU|A Chain A, Structural Determinants Of The Beta-Selectivity Of A Bacterial Aminotransferase Length = 465

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 73/330 (22%), Positives = 124/330 (37%), Gaps = 43/330 (13%)
Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
           PLVI +  GS   DV+G  Y++ L        G S P + AA       L    +   +T
Sbjct: 83  PLVIAQGTGSRFQDVDGHAYVNFLGEYTAGLFGHSHPVIRAAVE---RALAVGLNLSTQT 139
Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
              +L  A+ + + F +  + +  FTNSG+EAN      +     A     +K  +A   
Sbjct: 140 ENEAL-FAEAVCDRFPSIDLVR--FTNSGTEAN------LMALATATAITGRKTVLAFDG 190
Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 262
            YHG  L  AS              AP    T+ P++       + E            D
Sbjct: 191 GYHGGLLNFASGH------------AP----TNAPYHVVLGVYNDVE---------GTAD 225
Query: 263 LILKEGPETIAAFIAEXXXXXXXXXXXXXTYFEKVQAVVKKYDILFIADEVICAFGRLGT 322
           L+ + G +  AA + E              + + ++A   +   L I DEV+ +  RL  
Sbjct: 226 LLKRHGHD-CAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMTS--RLSG 282
Query: 323 MFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP 382
               +   I  DL +  K +    M  GA     ++ E      +  G+F+H  T++ + 
Sbjct: 283 GGAQEMLGISADLTTLGKYIGGG-MSFGAFGGRRDLMERFDPARD--GAFAHAGTFNNNI 339
Query: 383 VSCAVAIEALKIYKERNIVEQVNKIAPKFQ 412
           ++ +    AL     R     ++    +F+
Sbjct: 340 LTMSAGHAALTQIYTRQAASDLSASGDRFR 369

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	514
3nui_A	478	Pyruvate transaminase; amino transferase, transfer	0.0
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	0.0
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	0.0
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	0.0
3hmu_A	472	Aminotransferase, class III; structural genomics,	0.0
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	0.0
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	0.0
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	0.0
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	1e-169
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	1e-124
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	1e-112
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	1e-111
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	1e-110
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	1e-109
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	1e-108
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	1e-108
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	1e-107
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	1e-105
1z7d_A	433	Ornithine aminotransferase; structural genomics co	1e-100
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	1e-98
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	2e-97
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	3e-96
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	7e-94
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	4e-93
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	8e-93
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	2e-91
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	2e-89
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	1e-87
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	1e-35
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	3e-33
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	5e-30
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	6e-30
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	2e-29
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	5e-29
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	8e-28
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	7e-26
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	2e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-07

>3nui_A Pyruvate transaminase; amino transferase, transferase; 2.00A {Vibrio fluvialis} Length = 478

 Score =  681 bits (1760), Expect = 0.0
 Identities = 177/465 (38%), Positives = 272/465 (58%), Gaps = 5/465 (1%)

Query: 48  GTDASSQKEDSTTNGFKGHD---MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLD 104
           G     +   +    ++       L  FT          +V+   EG Y+ DVNG++YLD
Sbjct: 6   GGQQMGRGSMNKPQSWEARAETYSLYGFTDMPSLHQRGTVVVTHGEGPYIVDVNGRRYLD 65

Query: 105 SLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAK 164
           + +GLW    G     L+ AA AQ    P YH+F+ R +  ++ L+++L+E+ +     +
Sbjct: 66  ANSGLWNMVAGFDHKGLIDAAKAQYERFPGYHAFFGRMSDQTVMLSEKLVEV-SPFDSGR 124

Query: 165 VFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF 224
           VF+TNSGSEANDT VK++W+ + A G+P K+K + R  +YHG T ++AS++G P  +  F
Sbjct: 125 VFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPY-NSVF 183

Query: 225 DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAG 284
            LP P  +H  CPHYWRY   GETEE++  RLA  LE+ I +EG +TIA F AEPV+GAG
Sbjct: 184 GLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAG 243

Query: 285 GVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSS 344
           GVIPP   YF+ +  +++KYDI  I+DEVIC FGR G  +GC  Y   PD +  +K L++
Sbjct: 244 GVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAIISSKNLTA 303

Query: 345 AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV 404
            + P+GA+++ PE+S+ + +    +  F HGFT SGHPV CA+A++A+ +     + E V
Sbjct: 304 GFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLAENV 363

Query: 405 NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK 464
            ++AP+F++ +K  ++ P IGE RG G +   E   +K+   PF     +       C  
Sbjct: 364 RRLAPRFEERLKHIAERPNIGEYRGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTD 423

Query: 465 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVKE 509
            G++ R  G ++++ PPFI++  ++DE+  K  KAL      V  
Sbjct: 424 LGLICRPLGQSVVLCPPFILTEAQMDEMFDKLEKALDKVFAEVAA 468

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A* Length = 460

 Score =  657 bits (1698), Expect = 0.0
 Identities = 179/445 (40%), Positives = 265/445 (59%), Gaps = 6/445 (1%)

Query: 68  MLAPFT--AGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAA 125
              P T        +    ++   EG  V+D NG+K +D+ AGL+C  +G    ++  A 
Sbjct: 17  FFHPSTHMGTHARGESPTRIMAGGEGVTVWDNNGRKSIDAFAGLYCVNVGYGRQKIADAI 76

Query: 126 TAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYY 185
             Q   L +YH++    T+ S+ LAK +++      M++V+F  SGS+AN+T +KL+WYY
Sbjct: 77  ATQAKNLAYYHAYVGHGTEASITLAKMIIDR-APKGMSRVYFGLSGSDANETNIKLIWYY 135

Query: 186 NNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHP 245
           NN LGRP KKK I+R + YHGS ++  SL+GL   H  FDLP   VLHT+ P+Y+R    
Sbjct: 136 NNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDR 195

Query: 246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 305
             +EE++S   A+ LE++IL EGPETIAAFI EP++G GG++PPPA Y+EK+QAV+KKYD
Sbjct: 196 SMSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYD 255

Query: 306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQ 365
           +L +ADEV+  FGRLGTMFG D Y IKPDL++ AK L+SAY P+  ++V+  V +V+   
Sbjct: 256 VLLVADEVVTGFGRLGTMFGSDHYGIKPDLITIAKGLTSAYAPLSGVIVADRVWQVLVQG 315

Query: 366 SNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDG-VKAFSDSPII 424
           S+ LGS  HG+TYS HP+  A  +  L++  E ++V    +    F+    KA      +
Sbjct: 316 SDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNV 375

Query: 425 GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV--SGDNIMMSPPF 482
           GE+RG G++   EF  +K     F     IG          G++ R    GD +  +PP 
Sbjct: 376 GEVRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMPQGDILGFAPPL 435

Query: 483 IMSPEEVDELISKYGKALKATEERV 507
            ++ E+ D ++SK   A+K+    +
Sbjct: 436 CLTREQADIVVSKTADAVKSVFANL 460

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A* Length = 459

 Score =  657 bits (1698), Expect = 0.0
 Identities = 171/459 (37%), Positives = 265/459 (57%), Gaps = 11/459 (2%)

Query: 56  EDSTTNGFKGHD---MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCT 112
           +  TT+ ++  D    L PFT           V+ + EG Y++D  G K +D +AGLWC 
Sbjct: 3   KQRTTSQWRELDAAHHLHPFTDTASLNQAGARVMTRGEGVYLWDSEGNKIIDGMAGLWCV 62

Query: 113 ALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGS 172
            +G        AA  Q+  LPFY++F+  T    ++L+  L E+ T +   +VF+TNSGS
Sbjct: 63  NVGYGRKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEV-TPAGFDRVFYTNSGS 121

Query: 173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVL 232
           E+ DT +++V  Y +  G+P KK  I R   YHGST+  ASL G+  +H++ DLP P + 
Sbjct: 122 ESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMA 181

Query: 233 HTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPAT 292
           H + P ++++     T +E+    A  LE+ IL+ G + +AAF+ EP+ GAGGVI PPAT
Sbjct: 182 HIEQPWWYKHG-KDMTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPAT 240

Query: 293 YFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAI 352
           Y+ +++ + +KYD+L +ADEVIC FGR G  FG   +  +PDL + AK LSS Y+PIGA+
Sbjct: 241 YWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFTAAKGLSSGYLPIGAV 300

Query: 353 LVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV-NKIAPKF 411
            V   V+E + +     G F+HGFTYSGHPV  AVA   +   ++  IV++V + I P  
Sbjct: 301 FVGKRVAEGLIAG----GDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYM 356

Query: 412 QDGVK-AFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR 470
           Q   +  FS    + ++RG G++       NK+  E FP    IG        ++ +++R
Sbjct: 357 QKRWRETFSRFEHVDDVRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMR 416

Query: 471 VSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVKE 509
             GD+I+ +PP +M+  EVDE+++   + L+  E+ +K 
Sbjct: 417 ACGDHIVSAPPLVMTRAEVDEMLAVAERCLEEFEQTLKA 455

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2} Length = 476

 Score =  655 bits (1691), Expect = 0.0
 Identities = 137/442 (30%), Positives = 235/442 (53%), Gaps = 5/442 (1%)

Query: 68  MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATA 127
           +L P     +       V+  +EG YV+  +G++ +D  AG+WC  +G     +V A   
Sbjct: 22  ILLPAQEMAKLGKSAQPVLTHAEGIYVHTEDGRRLIDGPAGMWCAQVGYGRREIVDAMAH 81

Query: 128 QLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN 187
           Q   LP+   +    T P+  LA+++  + T   + ++FFT  GS A D+ ++   +YNN
Sbjct: 82  QAMVLPYASPW-YMATSPAARLAEKIATL-TPGDLNRIFFTTGGSTAVDSALRFSEFYNN 139

Query: 188 ALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGE 247
            LGRP KK+ I R   YHGST + A+ +G       FD+    +     P+         
Sbjct: 140 VLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRH--AGNR 197

Query: 248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL 307
           ++E +   L    ED I   GP+TIAAF+AEP++ +GGVI PPA Y  + +A+ +K+DIL
Sbjct: 198 SQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDIL 257

Query: 308 FIADEVICAFGRLGTMFGCDK-YSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQS 366
           +I+DEV+  FGR G  F  +K + + PD+++FAK ++S Y+P+G + +S  V   I  ++
Sbjct: 258 YISDEVVTGFGRCGEWFASEKVFGVVPDIITFAKGVTSGYVPLGGLAISEAVLARISGEN 317

Query: 367 NTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGE 426
                F++G+TYS  PV+CA A+  +++ +   IV+Q  ++A  F   + +  D P + E
Sbjct: 318 AKGSWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLRDLPGVAE 377

Query: 427 IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSP 486
            R  GL+   +   + +  +    +         +C + G++VR  GD  ++SPP I+S 
Sbjct: 378 TRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPLGDLCVISPPLIISR 437

Query: 487 EEVDELISKYGKALKATEERVK 508
            ++DE+++   +A+        
Sbjct: 438 AQIDEMVAIMRQAITEVSAAHG 459

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi} Length = 472

 Score =  649 bits (1677), Expect = 0.0
 Identities = 170/463 (36%), Positives = 266/463 (57%), Gaps = 13/463 (2%)

Query: 52  SSQKEDSTTNGFKGHD---MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAG 108
           ++      T   +  D    L PF+A     +    VI ++ G ++ D  G++ LD++AG
Sbjct: 4   ATITNHMPTAELQALDAAHHLHPFSANNALGEEGTRVITRARGVWLNDSEGEEILDAMAG 63

Query: 109 LWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFT 168
           LWC  +G     L   A  Q+  LP+Y++F+  T  P++ LA++L E+     +  VFF 
Sbjct: 64  LWCVNIGYGRDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAEL-APGDLNHVFFA 122

Query: 169 NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPA 228
             GSEANDT +++V  Y    G+P K   I+R+ +YHGST+ +++L G+  +H +  L  
Sbjct: 123 GGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLI- 181

Query: 229 PFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIP 288
           P V H + P++W      +  EE+    A  LE+ IL+ G   +AAFIAEPV GAGGVI 
Sbjct: 182 PDVHHINQPNWWAEGGDMD-PEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIV 240

Query: 289 PPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMP 348
            P +Y+ ++Q +  KYDIL IADEVIC FGR G  FG     I+P +++ AK LSS Y P
Sbjct: 241 APDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMTIAKGLSSGYAP 300

Query: 349 IGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKI- 407
           IG  +V  EV+ VI         F+HG+TYSGHPV+ AVA+E L+I +E NI++ V  + 
Sbjct: 301 IGGSIVCDEVAHVIGK-----DEFNHGYTYSGHPVAAAVALENLRILEEENILDHVRNVA 355

Query: 408 APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWG-IGAYFGAQCEKHG 466
           AP  ++  +A +D P++GE +  G++       NK+    F  E G IG     +C  + 
Sbjct: 356 APYLKEKWEALTDHPLVGEAKIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANN 415

Query: 467 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVKE 509
           +++R  GD +++SPP +++P E+DE+  +  K+L   +  +++
Sbjct: 416 LIMRHVGDRMIISPPLVITPAEIDEMFVRIRKSLDEAQAEIEK 458

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida} Length = 449

 Score =  633 bits (1636), Expect = 0.0
 Identities = 139/437 (31%), Positives = 215/437 (49%), Gaps = 11/437 (2%)

Query: 71  PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 130
           P+TA        P +I  +EGS++ D  G+K  DSL+GLW    G +   +  A   QL+
Sbjct: 22  PYTANRNFLR-DPRLIVAAEGSWLVDDKGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLS 80

Query: 131 TLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG 190
           TL +   F       S  LA+++ ++ T   +  VFFT+SGSE   T VK+V  Y    G
Sbjct: 81  TLDYSPGF-QYGHPLSFQLAEKITDL-TPGNLNHVFFTDSGSECALTAVKMVRAYWRLKG 138

Query: 191 RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 250
           +  K K I R + YHG  +   SL G+    + F  P   V H         A+     +
Sbjct: 139 QATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPK 198

Query: 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 310
           E    LA+ L  LI       IAA   EP+ G+ GV+ PP  Y ++ + +  +++IL + 
Sbjct: 199 EGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVF 258

Query: 311 DEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT-- 368
           DEVI  FGR G+MFG D + + PDL+  AK +++  +P+GA++ S E+ +   +Q     
Sbjct: 259 DEVITGFGRTGSMFGADSFGVTPDLMCIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEY 318

Query: 369 LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR 428
              F HG+TYS HPV+CA  + AL + ++ N+V+ V ++AP F+  +     +  + +IR
Sbjct: 319 AVEFPHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGIKGAKNVIDIR 378

Query: 429 GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEE 488
             GL    + A         P E G+  +      K G  VR  GD +   P F   P++
Sbjct: 379 NFGLAGAIQIAPRDGDAIVRPFEAGMALW------KAGFYVRFGGDTLQFGPTFNSKPQD 432

Query: 489 VDELISKYGKALKATEE 505
           +D L    G+ L    +
Sbjct: 433 LDRLFDAVGEVLNKLLD 449

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis} Length = 452

 Score =  613 bits (1583), Expect = 0.0
 Identities = 137/432 (31%), Positives = 232/432 (53%), Gaps = 16/432 (3%)

Query: 79  TDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSF 138
           +     V  K+EG +V D+ GK+YLD ++GLWC   G     L  AA  QL TL ++   
Sbjct: 28  SPNSTTVGAKAEGCWVEDIQGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSYFP-- 85

Query: 139 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 198
            +++ +P++ LA++L E         +FF+NSGSEAN+T  K+   Y    G P++ KF+
Sbjct: 86  MSQSHEPAIKLAEKLNEW--LGGEYVIFFSNSGSEANETAFKIARQYYAQKGEPHRYKFM 143

Query: 199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258
           +R + YHG+T+   + +G      +++  A   LH   P  +R     E E  Y      
Sbjct: 144 SRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPG-IERENIYDVECVK 202

Query: 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318
            ++ ++  E  ETIAAFI EP+I  GG++  P  Y + V    +K+  L I+DEVIC FG
Sbjct: 203 EVDRVMTWELSETIAAFIMEPIITGGGILMAPQDYMKAVHETCQKHGALLISDEVICGFG 262

Query: 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 378
           R G  FG   Y +KPD+++ AK ++SAY+P+ A  V  E+ E    +      F H  T+
Sbjct: 263 RTGKAFGFMNYDVKPDIITMAKGITSAYLPLSATAVKREIYEAFKGKG-EYEFFRHINTF 321

Query: 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGLILGTE 437
            G+P +CA+A++ L+I +  N++E+  ++     + +K    + P++G+IRG GL++G E
Sbjct: 322 GGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEEIGEHPLVGDIRGKGLLVGIE 381

Query: 438 FADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------DNIMMSPPFIMSPEEVD 490
             ++K   EP   +          C++ G+++  +G       + + ++PP ++S EE+ 
Sbjct: 382 LVNDKETKEPIDNDKIASVV--NACKEKGLIIGRNGMTTAGYNNILTLAPPLVISSEEIA 439

Query: 491 ELISKYGKALKA 502
            +I     A++ 
Sbjct: 440 FVIGTLKTAMER 451

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, pyridoxal phosphate, PSI-2, protein structure initiative; 1.70A {Deinococcus radiodurans} Length = 430

 Score =  579 bits (1496), Expect = 0.0
 Identities = 129/432 (29%), Positives = 209/432 (48%), Gaps = 26/432 (6%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
             V  + EG ++YD  G++YLD  +G     +G     +     AQ   LPF H     +
Sbjct: 12  YPVAVRGEGVFLYDDAGRRYLDGSSGALVANIGHGRAEVGERMAAQAARLPFVHGS-QFS 70

Query: 143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK 202
           +    + A  L          + +  + GSEA ++ VKL   Y+   G P + K I R  
Sbjct: 71  SDVLEEYAGRLARF-VGLPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVP 129

Query: 203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED 262
           SYHG++L + + SG+ A  + +    P +     P       P           A  L  
Sbjct: 130 SYHGASLGSLAASGMGARRELYT---PLMRPEAWPKL-----PKPDPARNGAEDAEGLRA 181

Query: 263 LILKEGPETIAAFIAEPVIGA-GGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321
           L+ +EGPET+AAF+AEPV+GA    + P   Y+E+V+ +  +  I+FIADEV+   GR G
Sbjct: 182 LLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCG 241

Query: 322 TMFGCDKYS-IKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG 380
           +     ++S + PD+    K L++ Y P+  +L +P+V E +   S   G+F HGFTY+G
Sbjct: 242 SPLALSRWSGVTPDIAVLGKGLAAGYAPLAGLLAAPQVYETVMGGS---GAFMHGFTYAG 298

Query: 381 HPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGLILGTEFA 439
           HPVS A  +  L I +  ++     +   +   G++A  +  P + ++RGTGL+LG    
Sbjct: 299 HPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQVRGTGLLLGVVLG 358

Query: 440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR--------VSGDNIMMSPPFIMSPEEVDE 491
           D  +  + F    GI +  GA   K G++            GD++++ PP  ++  EVD 
Sbjct: 359 D-LATGQAFETP-GIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDG 416

Query: 492 LISKYGKALKAT 503
           L++    AL+  
Sbjct: 417 LLALLAGALEDV 428

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} PDB: 3drd_A 3du4_A* Length = 448

 Score =  485 bits (1250), Expect = e-169
 Identities = 135/434 (31%), Positives = 223/434 (51%), Gaps = 7/434 (1%)

Query: 71  PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 130
           PFT   +  D +PL+IE   G  V D+NGK+Y D  + +W    G  +  L  A   QL 
Sbjct: 16  PFTQ-MKDYDENPLIIESGTGIKVKDINGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLG 74

Query: 131 TLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG 190
            +  + +    T  P+  LA+ L+++ +  K+ +VF+++SG+EA +  +K+ + Y   +G
Sbjct: 75  KIA-HSTLLGMTNVPATQLAETLIDI-SPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIG 132

Query: 191 RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE 250
           +P K+KFIA +  YHG T+ A S+  +   H  +            P+ +R        +
Sbjct: 133 KPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYR--SESGDPD 190

Query: 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKYDILFI 309
           E   +    L  L L+E  E IAA   E ++ GA G+I  P  Y   V+ +   YD+L I
Sbjct: 191 ECRDQCLRELAQL-LEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMI 249

Query: 310 ADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTL 369
            DEV   FGR G MF C+  +++PDL++  K ++  Y+PI     + ++ +  +     L
Sbjct: 250 VDEVATGFGRTGKMFACEHENVQPDLMAAGKGITGGYLPIAVTFATEDIYKAFYDDYENL 309

Query: 370 GSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG 429
            +F HG +Y+G+ + CAVA+E L +++  NIVEQV + + K    ++     P +G+IR 
Sbjct: 310 KTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGDIRQ 369

Query: 430 TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEV 489
            G + G E   +K   EP+P +  IG     +  + GML R  GD I   PP   + EE+
Sbjct: 370 LGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLGDVIAFLPPLASTAEEL 429

Query: 490 DELISKYGKALKAT 503
            E+++   +A+   
Sbjct: 430 SEMVAIMKQAIHEV 443

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A* Length = 433

 Score =  370 bits (952), Expect = e-124
 Identities = 108/427 (25%), Positives = 196/427 (45%), Gaps = 26/427 (6%)

Query: 82  HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNR 141
            P++IE+++GS+VYD +G+  LD  +G     LG   P +V+        L   H F   
Sbjct: 25  EPMIIERAKGSFVYDADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLD--HLFSEM 82

Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
            ++P +DLA  L  + T   + +    ++G+E+N+  +++        G+    + +   
Sbjct: 83  LSRPVVDLATRLANI-TPPGLDRALLLSTGAESNEAAIRMAKLVT---GKY---EIVGFA 135

Query: 202 KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE 261
           +S+HG T  AAS +      +     A        P  +R         +Y     +   
Sbjct: 136 QSWHGMTGAAASATYSAG-RKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYL-AELDYAF 193

Query: 262 DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321
           DLI ++    +AAFIAEP++ +GG+I  P  Y   ++   +   +L I DE     GR G
Sbjct: 194 DLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTG 253

Query: 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 381
           TMF C +  + PD+++ +K L +  +P+ AI+ S  + E  H        +    T+   
Sbjct: 254 TMFACQRDGVTPDILTLSKTLGA-GLPLAAIVTSAAIEERAHE-----LGYLFYTTHVSD 307

Query: 382 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFAD 440
           P+  AV +  L + +   +V + N +  + + G+    +    IG++RG GL+LG E   
Sbjct: 308 PLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVK 367

Query: 441 NKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSPEEVDELISK 495
           ++   EP       GA    +C   G+ + +      G    ++PP  +S +E+D  +S 
Sbjct: 368 DRRTKEPADGL---GAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSL 424

Query: 496 YGKALKA 502
            G+A++ 
Sbjct: 425 LGQAIER 431

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A* Length = 831

 Score =  351 bits (903), Expect = e-112
 Identities = 96/487 (19%), Positives = 160/487 (32%), Gaps = 61/487 (12%)

Query: 71  PFTA--GWQSTDVHPLVIEKSEGSYVYDVNG----KKYLDSLAGLWCTALG-GSEPRLVA 123
           PFT         V  +     E   +Y  +      +  D+ A  W        +  L  
Sbjct: 345 PFTQHKLVHQETVTVIDSRCGENFSIYKASDNSSLSQQFDACASWWTQGPDPTFQAELAR 404

Query: 124 AATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVW 183
                      +  F     +P+L  A+ LL+       ++V+F+++GS A +  +K+ +
Sbjct: 405 EMGYTAARFG-HVMFPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALKMAF 463

Query: 184 YY---------NNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD--------- 225
                           +    K IA + SYHG TL A                       
Sbjct: 464 RKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGL 523

Query: 226 ---------------LPAPFVLHTDCPHYWRYAHPGET----------EEEYSTRLANNL 260
                          +  P       P Y  +    E              YS  L+ +L
Sbjct: 524 FLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHL 583

Query: 261 EDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319
           ++         + A I EPVI GAGG+      +   +    +   I  I DEV   F R
Sbjct: 584 QEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWR 643

Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
           LG     +    KPD+  FAK L+   +P+   L +  V +     S    +  HG +YS
Sbjct: 644 LGVETTTELLGCKPDIACFAKLLTGGMVPLAVTLATDAVFDSFSGDSKL-KALLHGHSYS 702

Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKF-----QDGVKAFSDSPIIGEIRGTGLIL 434
            H + CA A +A++ +K+      +            ++ V+  S    +  +   G + 
Sbjct: 703 AHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRVVVIGTLF 762

Query: 435 GTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELIS 494
             E   + S +                  + G+  R  G+ I +      SPE    L++
Sbjct: 763 ALELKADASNS---GYASLYAKSLLIMLREDGIFTRPLGNVIYLMCGPCTSPEICRRLLT 819

Query: 495 KYGKALK 501
           K  K L 
Sbjct: 820 KLYKRLG 826

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A* Length = 457

 Score =  336 bits (865), Expect = e-111
 Identities = 102/438 (23%), Positives = 195/438 (44%), Gaps = 35/438 (7%)

Query: 71  PFTAGWQSTDVHPLVIEKSEGSYVY---DVNGKKYLDSLAGLWCTALGGSEPRLVAAATA 127
           P+++      V P+V   + G+++    D    + LD+++  W    G   P L  A T 
Sbjct: 44  PYSS-IGREAVSPVVAVAAHGAWLTLIRDGQPIEVLDAMSSWWTAIHGHGHPALDQALTT 102

Query: 128 QLNTLPFYHS-FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYN 186
           QL  +   H  F   T +P+  LAK L+++ T + +  VFF++SGS + +   K+   Y 
Sbjct: 103 QLRVMN--HVMFGGLTHEPAARLAKLLVDI-TPAGLDTVFFSDSGSVSVEVAAKMALQYW 159

Query: 187 NALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL-HQKFDLPAPFVLHTDCPHYWRYAHP 245
              G P K++ +  +  YHG T +A S+       H  +       +            P
Sbjct: 160 RGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQV-------P 212

Query: 246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKY 304
            + +  Y    +   E   L +    +AA + EPV+ GAGG+      Y   ++ + ++Y
Sbjct: 213 RDYDPAY----SAAFEAQ-LAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRY 267

Query: 305 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHS 364
           ++L I DE+   FGR G +F  D   + PD++   KAL+  Y+ + A L + +V+  I +
Sbjct: 268 EVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVGKALTGGYLSLAATLCTADVAHTISA 327

Query: 365 QSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPII 424
            +   G+  HG T+  +P++CAV++ ++++   ++   ++ ++A     G+      P +
Sbjct: 328 GAA--GALMHGPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTARALPAV 385

Query: 425 GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIM 484
            ++R  G I   E           P                G+ +R   + +   PP+I 
Sbjct: 386 TDVRVCGAIGVIECDRPVDLAVATP-----------AALDRGVWLRPFRNLVYAMPPYIC 434

Query: 485 SPEEVDELISKYGKALKA 502
           +P E+ ++ S   +  + 
Sbjct: 435 TPAEITQITSAMVEVARL 452

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A* Length = 429

 Score =  334 bits (858), Expect = e-110
 Identities = 111/435 (25%), Positives = 202/435 (46%), Gaps = 30/435 (6%)

Query: 71  PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 130
           PFT+   ++ +    +  +EG  +   +G++ +D ++  W    G + P+L AA  +Q++
Sbjct: 16  PFTS--MTSPLPVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQID 73

Query: 131 TLPFYHS-FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL 189
            +   H  F   T  P+++L ++L+ M T   +  VF  +SGS A +  +K+   Y  A 
Sbjct: 74  AMS--HVMFGGITHAPAIELCRKLVAM-TPQPLECVFLADSGSVAVEVAMKMALQYWQAK 130

Query: 190 GRPNKKKFIARQKSYHGSTLIAASLSGLPAL-HQKFDLPAPFVLHTDCPHYWRYAHPGET 248
           G   +++F+  +  YHG T  A S+       H  +    P  L    P           
Sbjct: 131 GEA-RQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRM------- 182

Query: 249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKYDIL 307
           + E+  R       L +      IAA I EP++ GAGG+      + ++++ +  +  IL
Sbjct: 183 DGEWDERDMVGFARL-MAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGIL 241

Query: 308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN 367
            IADE+   FGR G +F C+   I PD++   KAL+   M + A L + EV+E I   + 
Sbjct: 242 LIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETIS--NG 299

Query: 368 TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI 427
             G F HG T+ G+P++CA A  +L I +  +  +QV  I  + ++ +    D+ ++ ++
Sbjct: 300 EAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDAEMVADV 359

Query: 428 RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPE 487
           R  G I   E     +                    + G+ +R  G  I + PP+I+ P+
Sbjct: 360 RVLGAIGVVETTHPVNMAALQ-----------KFFVEQGVWIRPFGKLIYLMPPYIILPQ 408

Query: 488 EVDELISKYGKALKA 502
           ++  L +   +A++ 
Sbjct: 409 QLQRLTAAVNRAVQD 423

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A Length = 451

 Score =  331 bits (850), Expect = e-109
 Identities = 102/427 (23%), Positives = 189/427 (44%), Gaps = 25/427 (5%)

Query: 82  HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNR 141
            P+   ++ G  V DV+G + +D  +G+  T +G S P++V A  +Q+        F   
Sbjct: 43  MPVYAVRAGGGIVEDVDGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTHT-CFMVT 101

Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
             +  + + ++L  +       +    NSGSEA +  VK+   +     +P     +A  
Sbjct: 102 PYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSHT---HKPA---VVAFD 155

Query: 202 KSYHGSTLIAASLSGLPALHQK-FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260
            +YHG T +  +L+     ++  F   AP +      + +R A  G+         A   
Sbjct: 156 HAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRA 215

Query: 261 EDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319
             +I K+ G + +AA + EP+ G GG I P   +   +    +K D++FIADEV   F R
Sbjct: 216 ITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFAR 275

Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
            G MF C+   I PDL+  AK ++   +P+ A+    E+ +  H           G TY 
Sbjct: 276 TGAMFACEHEGIDPDLIVTAKGIAGG-LPLSAVTGRAEIMDSPHVS-------GLGGTYG 327

Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEF 438
           G+P++CA A+  ++  +   +V +  +I    +D +    ++   IG++RG G ++  E 
Sbjct: 328 GNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQAEDDRIGDVRGRGAMIAMEL 387

Query: 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIM-MSPPFIMSPEEVDELISK 495
               +      P+  +     A     G++V   G   N++   PP  +  + ++E +  
Sbjct: 388 VKAGTT----EPDADLTKALCAGAHAAGVIVLSCGTYGNVVRFLPPLSIGDDLLNEGLDV 443

Query: 496 YGKALKA 502
             + L+ 
Sbjct: 444 LEEVLRG 450

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A* Length = 426

 Score =  329 bits (845), Expect = e-108
 Identities = 108/430 (25%), Positives = 200/430 (46%), Gaps = 32/430 (7%)

Query: 82  HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNR 141
           HP+  +++E   V+DV G++YLD   G+     G   P++VAA  AQL  L     F   
Sbjct: 23  HPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHT-CFQVL 81

Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
             +P L+L + + +        K     +GSEA +  VK+         R      IA  
Sbjct: 82  AYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAAT---KRSG---TIAFS 135

Query: 202 KSYHGSTLIAASLSGLPALHQK-FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260
            +YHG T    +L+G    +     L    V     P        G +E++       ++
Sbjct: 136 GAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLH----GISEDDA----IASI 187

Query: 261 EDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319
             +   +  PE IAA + EPV G GG       + ++++A+  ++ I+ IADEV    GR
Sbjct: 188 HRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGR 247

Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
            GT+F  ++  + PDL +FAK+++    P+  +    EV + +            G TY+
Sbjct: 248 TGTLFAMEQMGVAPDLTTFAKSIAGG-FPLAGVTGRAEVMDAVAPG-------GLGGTYA 299

Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEF 438
           G+P++C  A+E LK++++ N++++ N +  K +DG+ A ++  P IG++RG G ++  E 
Sbjct: 300 GNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIEL 359

Query: 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIM-MSPPFIMSPEEVDELISK 495
            ++   N+P      + A   A+    G+++   G   N++ +  P  +   ++ + +  
Sbjct: 360 FEDGDHNKPDA---KLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEI 416

Query: 496 YGKALKATEE 505
             +     ++
Sbjct: 417 ISQCFDEAKQ 426

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii} Length = 419

 Score =  326 bits (839), Expect = e-108
 Identities = 121/433 (27%), Positives = 204/433 (47%), Gaps = 45/433 (10%)

Query: 81  VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYH-SF 138
           + PLVI+  EG ++YDV+G KYLD  +G+    LG  S P ++     Q+      H + 
Sbjct: 23  LFPLVIDHGEGVWIYDVDGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQK--LAHAAA 80

Query: 139 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 198
            +    P L+LAK+L+     +   KVFF+NSG+EA +  +K+V       GR      I
Sbjct: 81  NDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVVKNT----GRKY---II 133

Query: 199 ARQKSYHGSTLIAASLSGLPALHQK-FDLPAPFVLHT---DCPHYWRYAHPGETEEEYST 254
           A    +HG T  + SL+   A+ +       P V+H    +      + +  E   E   
Sbjct: 134 AFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVN 193

Query: 255 RLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADE 312
           R+   +ED I      PE +A    EP+ G GG + PP  +F ++Q + KKY IL + DE
Sbjct: 194 RVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDE 253

Query: 313 VICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF 372
           V    GR G +F  + ++  PD+++ AKAL    MPIGA +   ++              
Sbjct: 254 VQMGLGRTGKLFAIENFNTVPDVITLAKALGGGIMPIGATIFRKDLD---------FKPG 304

Query: 373 SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGL 432
            H  T+ G+ ++CA+  + + I K+  ++  VN+I   F + ++      +  ++RG GL
Sbjct: 305 MHSNTFGGNALACAIGSKVIDIVKD--LLPHVNEIGKIFAEELQG-----LADDVRGIGL 357

Query: 433 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDE 491
             G E+ + K  +               +  K G+L+  +G + + + PP ++S EE  +
Sbjct: 358 AWGLEYNEKKVRDR-----------IIGESFKRGLLLLPAGRSAIRVIPPLVISEEEAKQ 406

Query: 492 LISKYGKALKATE 504
            +    K +K  +
Sbjct: 407 GLDILKKVIKVVK 419

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A* Length = 439

 Score =  326 bits (839), Expect = e-107
 Identities = 98/446 (21%), Positives = 178/446 (39%), Gaps = 29/446 (6%)

Query: 72  FTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNT 131
                Q     PL I    G+ + + NG++ +D        +LG   P +VAA +A    
Sbjct: 15  AIGNLQKLRFFPLAISGGRGARLIEENGRELIDLSGAWGAASLGYGHPAIVAAVSAAAAN 74

Query: 132 LPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR 191
                   + +  P++ LA+ LL  F      K++F +SGS+AN+   + +       GR
Sbjct: 75  PAGAT-ILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKAT---GR 130

Query: 192 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE 251
                 IA   +YHG T+ + + SG     Q     A  ++    P  +R        + 
Sbjct: 131 SG---VIAFAGAYHGCTVGSMAFSGHSV--QADAAKADGLILLPYPDPYR----PYRNDP 181

Query: 252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIAD 311
               +   L + +      +I A   EP+   GG+I PP  +  K   + + + IL + D
Sbjct: 182 TGDAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCD 241

Query: 312 EVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS 371
           EV     R G +   +     PD++   K L    +P+ A++   E+ +   +       
Sbjct: 242 EVKVGLARSGRLHCFEHEGFVPDILVLGKGLGGG-LPLSAVIAPAEILDCASA------- 293

Query: 372 FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGT 430
                T  G+P+S A  +  L+     ++     +     +DG+   +   P+IG+IRG 
Sbjct: 294 -FAMQTLHGNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDIRGR 352

Query: 431 GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIM-MSPPFIMSPE 487
           GL  G E   ++   EP   E    A    +  + G++V   G   N++  +PP  ++  
Sbjct: 353 GLACGMELVCDRQSREPARAE---TAKLIYRAYQLGLVVYYVGMNGNVLEFTPPLTITET 409

Query: 488 EVDELISKYGKALKATEERVKELKSQ 513
           ++ + +    +A         E  +Q
Sbjct: 410 DIHKALDLLDRAFSELSAVSNEEIAQ 435

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus} Length = 453

 Score =  322 bits (827), Expect = e-105
 Identities = 112/430 (26%), Positives = 193/430 (44%), Gaps = 28/430 (6%)

Query: 82  HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNR 141
            P+    ++G  + D +G  ++D  AG+  T +G S P + AA   Q         F   
Sbjct: 46  APVYAVDADGGVIVDADGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTHT-CFMVT 104

Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
             +  + +A+ L  +       +    NSG+EA +  +K+        GRP     +A  
Sbjct: 105 PYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLAT---GRPA---VVAFD 158

Query: 202 KSYHGSTLIAASLSGLPALHQK-FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260
            +YHG T +  +L+     ++  F   AP V      +  R   PG T EE + R  + +
Sbjct: 159 NAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDE-PGLTGEEAARRAISRI 217

Query: 261 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL 320
           E  I   G +++AA I EP+ G GG I P   +   + A   +  ++FIADEV   F R 
Sbjct: 218 ETQI---GAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFART 274

Query: 321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG 380
           G  F  +   I PD+V+ AK ++   MP+ A+    E+ + +++          G TY G
Sbjct: 275 GAWFASEHEGIVPDIVTMAKGIAGG-MPLSAVTGRAELMDAVYAG-------GLGGTYGG 326

Query: 381 HPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEFA 439
           +PV+CA A+ AL + +E ++  +   I       + A ++   IIGE+RG G +L  E  
Sbjct: 327 NPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEVRGRGAMLAIEIV 386

Query: 440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIM-MSPPFIMSPEEVDELISKY 496
              +      P+  +     A+    G+L+   G   N++ + PP ++  + +DE I+  
Sbjct: 387 KPGTL----EPDAALTKSIAAEALSQGVLILTCGTFGNVIRLLPPLVIGDDLLDEGITAL 442

Query: 497 GKALKATEER 506
              ++A    
Sbjct: 443 SDIIRAKASH 452

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A Length = 433

 Score =  308 bits (791), Expect = e-100
 Identities = 121/432 (28%), Positives = 195/432 (45%), Gaps = 53/432 (12%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS---FW 139
           P+V+++++G +VYDVN K+Y D L+       G   P ++ A   Q   L        F+
Sbjct: 48  PVVLKRAKGVFVYDVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNL--TICSRAFF 105

Query: 140 NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRPNKKKF 197
           +    P     + L  +       KV   N+G+EAN+T  KL   W Y       N  K 
Sbjct: 106 S---VPLGICERYLTNLL---GYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKI 159

Query: 198 IARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257
           +  + ++ G TL   S S        F    PF              P  ++  Y     
Sbjct: 160 VVCKNNFSGRTLGCISASTTKKCTSNFG---PFA-------------PQFSKVPY----- 198

Query: 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317
           ++LE L  +     + AFI EP+ G  GVI P   Y + V  + KKY++LF+ADEV    
Sbjct: 199 DDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGL 258

Query: 318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377
           GR G +     Y++KPD++   KALS  + PI A+L + ++  VI       G   HG T
Sbjct: 259 GRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKP-----G--EHGST 311

Query: 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGT 436
           Y G+P++ ++ +EAL +     + E   K+   F + +K    DS I+ ++RG GL+   
Sbjct: 312 YGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAI 371

Query: 437 EFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISK 495
           EF               I      + +++G++ R   D  + ++PP  ++ E++DE    
Sbjct: 372 EF------KNELVNVLDI----CLKLKENGLITRDVHDKTIRLTPPLCITKEQLDECTEI 421

Query: 496 YGKALKATEERV 507
             K +K  +ER 
Sbjct: 422 IVKTVKFFDERF 433

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A* Length = 439

 Score =  303 bits (779), Expect = 1e-98
 Identities = 111/426 (26%), Positives = 188/426 (44%), Gaps = 52/426 (12%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS---FW 139
           P+ +E+ +G Y++DV G+KY D L+       G   P++V A  +Q++ L    +   F+
Sbjct: 59  PVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKL--TLTSRAFY 116

Query: 140 NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRPNKKKF 197
           N       +  + + ++F      KV   N+G EA +T  KL   W Y     +  K K 
Sbjct: 117 N---NVLGEYEEYITKLF---NYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKI 170

Query: 198 IARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257
           +    ++ G TL A S S  P  +  F    PF+             PG     Y     
Sbjct: 171 VFAAGNFWGRTLSAISSSTDPTSYDGF---GPFM-------------PGFDIIPY----- 209

Query: 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317
           N+L  L        +AAF+ EP+ G  GV+ P   Y   V+ +  ++ +LFIADE+    
Sbjct: 210 NDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGL 269

Query: 318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377
            R G     D  +++PD+V   KALS    P+ A+L   ++   I       G   HG T
Sbjct: 270 ARTGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKP-----G--EHGST 322

Query: 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTE 437
           Y G+P+ C VAI AL++ +E N+ E  +K+    ++ +     S ++  +RG GL+    
Sbjct: 323 YGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKL-PSDVVTAVRGKGLLNAIV 381

Query: 438 FADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKY 496
                        +         +   +G+L + +  +I+  +PP ++  +E+ E I   
Sbjct: 382 IK---------ETKDWDAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESIEII 432

Query: 497 GKALKA 502
            K + +
Sbjct: 433 NKTILS 438

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} Length = 392

 Score =  299 bits (767), Expect = 2e-97
 Identities = 116/424 (27%), Positives = 195/424 (45%), Gaps = 57/424 (13%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS---FW 139
           P+VI K+EG +V D  G +Y+D L+       G   P+++ A   Q N +    +   F 
Sbjct: 19  PIVISKAEGVWVEDPEGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRV--TLTSRAFH 76

Query: 140 NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV--WYYNNALGRPNKKKF 197
           +          +++ ++        V   N+G+EA +T +K    W Y+      N+ + 
Sbjct: 77  S---DQLGPWYEKVAKLT---NKEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEI 130

Query: 198 IARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA 257
           I  + ++HG T+ A S+S      + F    P +             PG     Y     
Sbjct: 131 IVCEDNFHGRTMGAVSMSSNEEYKRGFG---PML-------------PGIIVIPY----- 169

Query: 258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF 317
            +LE L     P T AAFI EP+ G  G+  PPA + ++   V KK ++LF+ADE+    
Sbjct: 170 GDLEALKAAITPNT-AAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGL 228

Query: 318 GRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377
           GR G +F CD  ++ PD+    KAL     PI     + ++  V        G  SHG T
Sbjct: 229 GRTGKVFACDWDNVTPDMYILGKALGGGVFPISCAAANRDILGVFEP-----G--SHGST 281

Query: 378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTE 437
           + G+P++CAV+I AL++ +E  + E+  ++  K    +K   D+P+I E+RG GL +G E
Sbjct: 282 FGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEI-DNPMITEVRGKGLFIGIE 340

Query: 438 FADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKY 496
                       P          Q +  G+L + + +N++ ++PP ++S E+++    K 
Sbjct: 341 LN---------EPARPY----CEQLKAAGLLCKETHENVIRIAPPLVISEEDLEWAFQKI 387

Query: 497 GKAL 500
              L
Sbjct: 388 KAVL 391

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A* Length = 395

 Score =  295 bits (759), Expect = 3e-96
 Identities = 105/422 (24%), Positives = 185/422 (43%), Gaps = 59/422 (13%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS---FW 139
            L+I + +G+ V+D  G +Y+D + G     LG   P +V A   Q  TL          
Sbjct: 28  DLLIVRGQGARVWDAEGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETL--MAMPQTLP 85

Query: 140 NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 199
                   +  + L  +    ++ +VF  NSG+EAN+  +K    +        +KKF+A
Sbjct: 86  T---PMRGEFYRTLTAI-LPPELNRVFPVNSGTEANEAALKFARAH------TGRKKFVA 135

Query: 200 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259
             + + G T+ + S++  P   + F    P V                    Y     N+
Sbjct: 136 AMRGFSGRTMGSLSVTWEPKYREPF---LPLV-------------EPVEFIPY-----ND 174

Query: 260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319
           +E L      ET AA I EPV G GGV P    +    + + ++   L I DE+    GR
Sbjct: 175 VEALKRAVDEET-AAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGR 233

Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
            G  F  + + I PD+++ AKAL    +P+G  ++  EV+  +       G   HG T+ 
Sbjct: 234 TGKRFAFEHFGIVPDILTLAKALGGG-VPLGVAVMREEVARSM-----PKG--GHGTTFG 285

Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFA 439
           G+P++ A  + A++  +   + E+  ++ P F + ++A   SP I E+RG GL++G E  
Sbjct: 286 GNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAI-PSPKIREVRGMGLMVGLELK 344

Query: 440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYGK 498
           +  +P            Y     ++H +L   +G  ++   PP ++  E+++ ++     
Sbjct: 345 EKAAP------------YIARLEKEHRVLALQAGPTVIRFLPPLVIEKEDLERVVEAVRA 392

Query: 499 AL 500
            L
Sbjct: 393 VL 394

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A Length = 449

 Score =  291 bits (748), Expect = 7e-94
 Identities = 78/435 (17%), Positives = 152/435 (34%), Gaps = 38/435 (8%)

Query: 83  PLVIEKSEGSYVYD-VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTL---PFYHSF 138
            L + +S GSY+ D + G++YLD    +  +ALG + P LV         +       S 
Sbjct: 36  VLDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSN 95

Query: 139 WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPN----- 193
            +  +       +    +     +  +FF   G+ A +  +K  + + +   + +     
Sbjct: 96  SDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPA 155

Query: 194 -KKKFIARQKSYHGSTLIAASLSGLPALHQKFD--LPAPFVLHTDCPHYWRYAHPGETEE 250
              + +  + ++HG +    SL+               P +   D P Y R         
Sbjct: 156 LGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRI---DAP-YMRPGLDEPAMA 211

Query: 251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 310
                          +  P  IA F+AEP+ G GG       +F  ++ +  ++D L I 
Sbjct: 212 ALEAEALRQARAAF-ETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIF 270

Query: 311 DEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG 370
           DEV    G  GT +   +  + PD+V+F K      +  G  +     +           
Sbjct: 271 DEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKTQVCGVMAGRRVDEVADNVF-------AV 323

Query: 371 SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD--SPIIGEIR 428
                 T+ G+      A   L++ +   + E+  +     +  +   +     ++ + R
Sbjct: 324 PSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPR 383

Query: 429 GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPE 487
           G GL+           +E              Q  +  ++V  +G + +   PP  +S  
Sbjct: 384 GRGLMCAFSLPTTADRDE-----------LIRQLWQRAVIVLPAGADTVRFRPPLTVSTA 432

Query: 488 EVDELISKYGKALKA 502
           E+D  I+    AL  
Sbjct: 433 EIDAAIAAVRSALPV 447

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A* Length = 420

 Score =  289 bits (741), Expect = 4e-93
 Identities = 118/425 (27%), Positives = 197/425 (46%), Gaps = 52/425 (12%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS---FW 139
             +  K +GS V+D  GK+Y+D   G+  TALG   P LV A  +Q  TL  +H+   F 
Sbjct: 40  DFIPVKGKGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVEALKSQGETL--WHTSNVFT 97

Query: 140 NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 199
           N   +P+L L ++L++   A+   +V F NSG+EAN+T  KL  +Y      P K K IA
Sbjct: 98  N---EPALRLGRKLID---ATFAERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIA 151

Query: 200 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259
              ++HG +L   S+ G P     F    P                      +     N+
Sbjct: 152 FHNAFHGRSLFTVSVGGQPKYSDGF---GPKP-------------ADIIHVPF-----ND 190

Query: 260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319
           L  +       T  A + EP+ G GGV      + + ++ +  ++  L + DEV C  GR
Sbjct: 191 LHAVKAVMDDHT-CAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGR 249

Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
            G +F    Y + PD+++ AKAL     P+ A+L + E++         +G  SHG TY 
Sbjct: 250 TGDLFAYMHYGVTPDILTSAKALGGG-FPVSAMLTTQEIASAF-----HVG--SHGSTYG 301

Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEF 438
           G+P++CAVA  A  I     +++ ++    +F   ++A  +   I  +IRG GL++G E 
Sbjct: 302 GNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAEL 361

Query: 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYG 497
                     P   G    F     + G++V  +G ++M  +P  ++   ++ E + ++ 
Sbjct: 362 K---------PKYKGRARDFLYAGAEAGVMVLNAGADVMRFAPSLVVEEADIHEGMQRFA 412

Query: 498 KALKA 502
           +A+  
Sbjct: 413 QAVGK 417

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp} Length = 395

 Score =  287 bits (736), Expect = 8e-93
 Identities = 122/425 (28%), Positives = 203/425 (47%), Gaps = 54/425 (12%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS---FW 139
            +V+EK +G Y++D   KKYLD  +G+   ALG +  +  A   AQ++ L   H+   ++
Sbjct: 19  DIVLEKGQGVYLFDDKAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKL--LHTSNLYY 76

Query: 140 NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 199
           N   +     AK L +   AS + +VFFTNSG+E+ +  +K    Y    G     +FIA
Sbjct: 77  N---ENIAAAAKNLAK---ASALERVFFTNSGTESIEGAMKTARKYAFNKG-VKGGQFIA 129

Query: 200 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259
            + S+HG TL A SL+      + F    P +              G    +Y     N+
Sbjct: 130 FKHSFHGRTLGALSLTANEKYQKPF---KPLI-------------SGVKFAKY-----ND 168

Query: 260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319
           +  +      +T  A I E V G GG+ P    +++ ++ +  + DIL IADE+ C  GR
Sbjct: 169 ISSVEKLVNEKT-CAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGR 227

Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
            G  F  +   I PD+++ AKAL    + +GA +++ +V+      SN+L +  HG TY 
Sbjct: 228 SGKFFAYEHAQILPDIMTSAKALGCG-LSVGAFVINQKVA------SNSLEAGDHGSTYG 280

Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEF 438
           G+P+ CA      +I+KE  I+E VNK+ P  +  +    +      + +G G + G   
Sbjct: 281 GNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKRKGLGFMQGLSL 340

Query: 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYG 497
             +    +              +C+++ +L+   G+N +   PP I+  E +DE+  K  
Sbjct: 341 DKSVKVAK-----------VIQKCQENALLLISCGENDLRFLPPLILQKEHIDEMSEKLR 389

Query: 498 KALKA 502
           KALK+
Sbjct: 390 KALKS 394

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A* Length = 397

 Score =  284 bits (728), Expect = 2e-91
 Identities = 118/425 (27%), Positives = 196/425 (46%), Gaps = 56/425 (13%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS---FW 139
           P      +GS++YD  G  YLD  +G+    LG S PRLV A   Q   L   H    FW
Sbjct: 23  PATFVYGKGSWIYDEKGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKL--IHCSNLFW 80

Query: 140 NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 199
           N   +P ++LA+ L +    +   KVFF N+G+EAN+  +K+   Y        K + ++
Sbjct: 81  N---RPQMELAELLSK---NTFGGKVFFANTGTEANEAAIKIARKYGKKKS-EKKYRILS 133

Query: 200 RQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN 259
              S+HG TL + + +G P   + F    P V             PG    E+     NN
Sbjct: 134 AHNSFHGRTLGSLTATGQPKYQKPF---EPLV-------------PGFEYFEF-----NN 172

Query: 260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319
           +EDL  K   +   A   EP+ G  G++P    + E+ + +  +YD L + DEV C  GR
Sbjct: 173 VEDLRRKMSEDV-CAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGR 231

Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
            G +F   KY + PD+++ AK L    +PIGA++V+   +         L    HG T+ 
Sbjct: 232 TGKLFAYQKYGVVPDVLTTAKGLGGG-VPIGAVIVNERAN--------VLEPGDHGTTFG 282

Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-PIIGEIRGTGLILGTEF 438
           G+P++C   +  +K   +   +E+V +        ++   +   ++ ++RG GL++G +F
Sbjct: 283 GNPLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQF 342

Query: 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYG 497
            +  S  E              +C ++ +LV  +G+N +   PP  +   E+D  +    
Sbjct: 343 REEVSNRE-----------VATKCFENKLLVVPAGNNTIRFLPPLTVEYGEIDLAVETLK 391

Query: 498 KALKA 502
           K L+ 
Sbjct: 392 KVLQG 396

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A* Length = 472

 Score =  281 bits (721), Expect = 2e-89
 Identities = 81/454 (17%), Positives = 160/454 (35%), Gaps = 57/454 (12%)

Query: 82  HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYH--SFW 139
                E+S G+Y+ DV+G + LD  + +    +G S P LV       N   F +  +  
Sbjct: 45  FFCNYEESRGNYLVDVDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALG 104

Query: 140 NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYY-------------- 185
               +  ++  +E L       M+++     GS +N+   K ++ +              
Sbjct: 105 ILPPENFVEKLRESLLSVAPKGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKE 164

Query: 186 -------NNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH 238
                  N A G P     ++   ++HG T+   + +   A+H K D+P+        P 
Sbjct: 165 ELETCMINQAPGCP-DYSILSFMGAFHGRTMGCLATTHSKAIH-KIDIPSFDWPIAPFPR 222

Query: 239 Y-WRYAHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFE 295
             +      +  ++   R    +EDLI+K  +  +T+A  I EP+   GG       +F 
Sbjct: 223 LKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFR 282

Query: 296 KVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK--PDLVSFAKALSSAYMPIGAIL 353
           K++ + +K+   F+ DEV    G  G  +  + + +    D+++F+K + +         
Sbjct: 283 KLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTG-GFFHKEE 341

Query: 354 VSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQD 413
             P               +    T+ G P    +  E + I K  +++            
Sbjct: 342 FRPNA------------PYRIFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLT 389

Query: 414 GVKAFSD--SPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV 471
           G+          I  +RG G     +  D    N+             +     G+++  
Sbjct: 390 GLLDLQARYPQFISRVRGRGTFCSFDTPDESIRNK-----------LISIARNKGVMLGG 438

Query: 472 SGDN-IMMSPPFIMSPEEVDELISKYGKALKATE 504
            GD  I   P  +         ++ +   L   +
Sbjct: 439 CGDKSIRFRPTLVFRDHHAHLFLNIFSDILADFK 472

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus} Length = 375

 Score =  273 bits (701), Expect = 1e-87
 Identities = 117/423 (27%), Positives = 195/423 (46%), Gaps = 63/423 (14%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS---FW 139
           P+   + +G Y+YD  GK+YLD ++G+   +LG + P+L  A   Q+  L   H    + 
Sbjct: 11  PVKFVRGKGVYLYDEEGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKL--LHVSNLYE 68

Query: 140 NRTTKPSLDLAKELLEMFTASKM-AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI 198
           N       +LA +L++         KVFF NSG+E+ +  +KL   Y    G  NK KFI
Sbjct: 69  N---PWQEELAHKLVK---HFWTEGKVFFANSGTESVEAAIKLARKYWRDKG-KNKWKFI 121

Query: 199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN 258
           + + S+HG T  + S +G P  H+ F    P V             PG +  +      N
Sbjct: 122 SFENSFHGRTYGSLSATGQPKFHKGF---EPLV-------------PGFSYAKL-----N 160

Query: 259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG 318
           +++ +      ET A  I E + G GGV      +  K+Q + K+ D+L I DEV    G
Sbjct: 161 DIDSVYKLLDEET-AGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIG 219

Query: 319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY 378
           R G  +    +++KPD+++ AK L    +PIGAIL   EV++       T G  SHG T+
Sbjct: 220 RTGEFYAYQHFNLKPDVIALAKGLGGG-VPIGAILAREEVAQSF-----TPG--SHGSTF 271

Query: 379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEF 438
            G+P++C      +   ++  ++  V ++   F++ +K         +++G GL+LG E 
Sbjct: 272 GGNPLACRAGTVVVDEVEK--LLPHVREVGNYFKEKLKELGKG----KVKGRGLMLGLEL 325

Query: 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM-MSPPFIMSPEEVDELISKYG 497
                              +  +  + G+L+  +   ++   PP I+  E +D  IS   
Sbjct: 326 ERECKD-------------YVLKALEKGLLINCTAGKVLRFLPPLIIQKEHIDRAISVLR 372

Query: 498 KAL 500
           + L
Sbjct: 373 EIL 375

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri} Length = 453

 Score =  137 bits (347), Expect = 1e-35
 Identities = 92/459 (20%), Positives = 161/459 (35%), Gaps = 101/459 (22%)

Query: 82  HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTA-LGGSEPRLVAAATAQLNT-----LPFY 135
           H L I  ++G +  DV+G  YLD   G      LG   PR+ AA    L+          
Sbjct: 39  HGLFISDAQGVHKTDVDGNVYLD-FFGGHGALVLGHGHPRVNAAIAEALSHGVQYAAS-- 95

Query: 136 HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 195
                      +  A+ ++  F +  + K+ FT SG+E     +++      A     ++
Sbjct: 96  -------HPLEVRWAERIVAAFPS--IRKLRFTGSGTETTLLALRV------ARAFTGRR 140

Query: 196 KFIARQKSYHG-STLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254
             +  +  YHG     A+              PAP V               ET     T
Sbjct: 141 MILRFEGHYHGWHDFSASG-YNSHF----DGQPAPGV-------------LPETTAN--T 180

Query: 255 RLA--NNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 310
            L   +++E +  +       IAAFIAEPV    GV P   ++  +   + ++Y  LFI 
Sbjct: 181 LLIRPDDIEGMREVFANHGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFIL 240

Query: 311 DEVICAFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAI--------LVSPEVSE 360
           DEVI  F R+G           ++PDL   AKA +   +P G +        ++S     
Sbjct: 241 DEVISGF-RVG--NHGMQALLDVQPDLTCLAKASAGG-LPGGILGGREDVMGVLSRGSDR 296

Query: 361 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-AFS 419
            +     T          +G+P++ A AI A+    E ++  ++N +    ++ +   F+
Sbjct: 297 KVL-HQGTF---------TGNPITAAAAIAAIDTILEDDVCAKINDLGQFAREAMNHLFA 346

Query: 420 DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWG---------IGAYFGAQCEKHGMLVR 470
              +     G             +  +                I A          +++ 
Sbjct: 347 RKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMR------MALILE 400

Query: 471 VSGDNIMMSPP----FI---MSPEEVDELISKYGKALKA 502
             G +I         F+      E V+ L++ + + L  
Sbjct: 401 --GVDI---GGRGSVFLSAQHEREHVEHLVTTFDRVLDR 434

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A* Length = 465

 Score =  130 bits (329), Expect = 3e-33
 Identities = 75/353 (21%), Positives = 124/353 (35%), Gaps = 79/353 (22%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTA-LGGSEPRLVAAATAQLNT-----LPFYH 136
           PLVI +  GS   DV+G  Y++   G +     G S P + AA    L            
Sbjct: 83  PLVIAQGTGSRFQDVDGHAYVN-FLGEYTAGLFGHSHPVIRAAVERALAVGLNLSTQ--- 138

Query: 137 SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 196
                 T+     A+ + + F +  +  V FTNSG+EAN   +        A     +K 
Sbjct: 139 ------TENEALFAEAVCDRFPS--IDLVRFTNSGTEANLMALAT------ATAITGRKT 184

Query: 197 FIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL 256
            +A    YHG  L+  +    P       +   +                          
Sbjct: 185 VLAFDGGYHGG-LLNFASGHAPTNAPYHVVLGVY-------------------------- 217

Query: 257 ANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI 314
            N++E    +LK      AA + EP++GAGG +P    + + ++A   +   L I DEV+
Sbjct: 218 -NDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVM 276

Query: 315 CAFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAI--------LVSPEVSEVIHS 364
               RL    G   +   I  DL +  K +    M  GA            P        
Sbjct: 277 T--SRLS--GGGAQEMLGISADLTTLGKYIGGG-MSFGAFGGRRDLMERFDPARD----- 326

Query: 365 QSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA 417
                G+F+H  T++ + ++ +    AL     R     ++    +F+  +  
Sbjct: 327 -----GAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLNR 374

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A* Length = 434

 Score =  121 bits (305), Expect = 5e-30
 Identities = 97/463 (20%), Positives = 167/463 (36%), Gaps = 114/463 (24%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTA-LGGSEPRLVAAATAQLNT-----LPFYH 136
           P  +++ EG+Y+Y V+G + +D L   +    LG   PR++ A    L        P   
Sbjct: 39  PFYVKRGEGAYLYTVDGARIVD-LVLAYGPLILGHKHPRVLEAVEEALARGWLYGAP--- 94

Query: 137 SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 196
                  +  + LA+++L          + F NSG+EA  T ++L      A G   +  
Sbjct: 95  ------GEAEVLLAEKILGYVKR--GGMIRFVNSGTEATMTAIRL------ARGYTGRDL 140

Query: 197 FIARQKSYHG---STLIAASLSGLPALHQKFDLP-APFVLHTDCPHYWRYAHPGETEEEY 252
            +     YHG   + L+AA  S   A H  + +P +  V             P       
Sbjct: 141 ILKFDGCYHGSHDAVLVAAG-SA--AAH--YGVPTSAGV-------------PEAVARL- 181

Query: 253 STRLA--NNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILF 308
            T +   N++E L  +  E  + IA  I EPVI   GVIPP   +   +Q + ++   L 
Sbjct: 182 -TLVTPYNDVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALL 240

Query: 309 IADEVICAFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAI--------LVSPEV 358
           I DEV+  F RLG         ++I+ D++   K +     P+GA+        L++P  
Sbjct: 241 ILDEVVTGF-RLG--LEGAQGYFNIEGDIIVLGKIIGGG-FPVGAVAGSREVMSLLTP-- 294

Query: 359 SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK-A 417
                      G   +  T++ HP++ A  +  LK  +E  +     + A   ++     
Sbjct: 295 ----------QGKVFNAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALEEAASEV 344

Query: 418 FSDSPIIGEIRGTGLILGTEFADN---------KSPNEPFPPEWGIGAYFGAQCEKHGML 468
              + +   I     ++                K+  + +                  ML
Sbjct: 345 LDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFY------VKLH------EEML 392

Query: 469 VRVSGDNIMMSPP------FI---MSPEEVDELISKYGKALKA 502
            R  G  I    P      F       E ++  +     +LK 
Sbjct: 393 RR--GVFI---APSNLEAVFTGLPHQGEALEIAVEGLRSSLKT 430

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} Length = 434

 Score =  120 bits (304), Expect = 6e-30
 Identities = 108/466 (23%), Positives = 171/466 (36%), Gaps = 120/466 (25%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTA-LGGSEPRLVAAATAQLNT-----LPFYH 136
           P+ +E+ +G+Y +DV+G KY+D     +     G + P +  A T           P   
Sbjct: 38  PIAMERGKGAYFWDVDGNKYID-YLAAYGPIITGHAHPHITKAITTAAENGVLYGTP--- 93

Query: 137 SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 196
                 T   +  AK L E   A  + KV F NSG+EA  T +++      A     + K
Sbjct: 94  ------TALEVKFAKMLKEAMPA--LDKVRFVNSGTEAVMTTIRV------ARAYTGRTK 139

Query: 197 FIARQKSYHG---STLIAASLSGLPALHQKFDLP------APFVLHTDCPHYWRYAHPGE 247
            +     YHG     L+AA  SG          P                 +        
Sbjct: 140 IMKFAGCYHGHSDLVLVAAG-SGPST----LGTPDSAGVPQSIAQEVITVPF-------- 186

Query: 248 TEEEYSTRLANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 305
                     NN+E L   L +    +AA + EP++G  G++ P   + EKV  +V +  
Sbjct: 187 ----------NNVETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAG 236

Query: 306 ILFIADEVICAFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAI--------LVS 355
            L I DEVI AF R    +G   D   + PDL +  K +    +PIGA          V+
Sbjct: 237 ALVIYDEVITAF-RFM--YGGAQDLLGVTPDLTALGKVIGGG-LPIGAYGGKKEIMEQVA 292

Query: 356 PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV 415
           P            LG      T +G+P S A  I  L++ ++  + E+++++    + G+
Sbjct: 293 P------------LGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGI 340

Query: 416 K-AFSDSPIIGEIRGTGLILGTEFADN---------KSPNEPFPPEWGIGAYFGAQCEKH 465
               +   I   +      L   F  N          +  E F      G +F       
Sbjct: 341 LEQAAKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMF------GKFF------K 388

Query: 466 GMLVRVSGDNIMMSPP------FI---MSPEEVDELISKYGKALKA 502
            ML    G N+    P      F+    + E+++  I   G+A  A
Sbjct: 389 LMLQE--GVNL---APSKYEAWFLTTEHTKEDIEYTIEAVGRAFAA 429

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A* Length = 427

 Score =  119 bits (301), Expect = 2e-29
 Identities = 88/357 (24%), Positives = 151/357 (42%), Gaps = 74/357 (20%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTA-LGGSEPRLVAAATAQLNT-----LPFYH 136
           P+V ++ + +Y +DV+G +Y+D   G W  A  G + P ++ A    +        P   
Sbjct: 35  PIVFDRVKDAYAWDVDGNRYID-YVGTWGPAICGHAHPEVIEALKVAMEKGTSFGAP--- 90

Query: 137 SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 196
                       LA+ + +   +  +  V F NSG+EA    +++            + K
Sbjct: 91  ------CALENVLAEMVNDAVPS--IEMVRFVNSGTEACMAVLRI------MRAYTGRDK 136

Query: 197 FIARQKSYHG---STLIAASLSGLPALHQKFDLP-APFVLHTDCPHYWRYAHPGETEEEY 252
            I  +  YHG     L+ A  SG+        LP +P V             P +T    
Sbjct: 137 IIKFEGCYHGHADMFLVKAG-SGVAT----LGLPSSPGV-------------PKKTTANT 178

Query: 253 STRLANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIA 310
            T   N+LE +  +  E P  IA  I EP++G  G I P A + E ++ +  ++D L + 
Sbjct: 179 LTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVF 238

Query: 311 DEVICAFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAI--------LVSPEVSE 360
           DEVI  F R+   +G   +K+ + PDL +  K +    +P+GA         LV+P    
Sbjct: 239 DEVITGF-RIA--YGGVQEKFGVTPDLTTLGKIIGGG-LPVGAYGGKREIMQLVAP---- 290

Query: 361 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA 417
                    G      T SG+P++    I+ L++ ++    E +++I  +  DG+ A
Sbjct: 291 --------AGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLA 339

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis} Length = 429

 Score =  117 bits (297), Expect = 5e-29
 Identities = 85/362 (23%), Positives = 139/362 (38%), Gaps = 84/362 (23%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTA-LGGSEPRLVAAATAQLNT-----LPFYH 136
           PL IE+++G+Y++DV+GK Y+D   G W    LG + P +  A    +        P   
Sbjct: 36  PLFIERADGAYLFDVDGKAYID-YVGSWGPMILGHNHPAIRQAVIEAVERGLSFGAP--- 91

Query: 137 SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 196
                 T+  + +A+ + ++     M  V   NSG+EA  + ++L      A G   + K
Sbjct: 92  ------TEMEVKMAQLVTDLVPT--MDMVRMVNSGTEATMSAIRL------ARGYTGRDK 137

Query: 197 FIARQKSYHG---STLIAASLSGLPALHQKFDLP------APFVLHTDCPHYWRYAHPGE 247
            I  +  YHG     L+ A  SG          P        F  HT    Y        
Sbjct: 138 IIKFEGCYHGHADCLLVKAG-SGALT----LGQPNSPGVPTDFAKHTLTCTY-------- 184

Query: 248 TEEEYSTRLANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 305
                     N+L  +    ++ P+ +A  I EPV G    IPP   +   ++A+  ++ 
Sbjct: 185 ----------NDLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFG 234

Query: 306 ILFIADEVICAFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAI--------LVS 355
            L I DEV+  F R+        D Y + PDL    K +    MP+GA          ++
Sbjct: 235 ALLIIDEVMTGF-RVA--LAGAQDYYHVIPDLTCLGKIIGGG-MPVGAFGGRREVMNALA 290

Query: 356 PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV 415
           P             G      T SG+P++ A     L    +  + E + ++      G+
Sbjct: 291 P------------TGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGL 338

Query: 416 KA 417
           + 
Sbjct: 339 RH 340

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} PDB: 3bs8_A* Length = 429

 Score =  114 bits (288), Expect = 8e-28
 Identities = 95/354 (26%), Positives = 146/354 (41%), Gaps = 69/354 (19%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTA-LGGSEPRLVAA--ATAQLNTLPFYHSFW 139
           PL +E+ +GS VYD++G +Y+D     W     G +  R+V A  A A+  T     SF 
Sbjct: 36  PLFMERGKGSKVYDIDGNEYID-YVLSWGPLIHGHANDRVVEALKAVAERGT-----SF- 88

Query: 140 NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIA 199
              T+    LAK ++E   +  +  V   NSG+EA  + ++L      A G   + K + 
Sbjct: 89  GAPTEIENKLAKLVIERVPS--IEIVRMVNSGTEATMSALRL------ARGYTGRNKILK 140

Query: 200 RQKSYHG---STLIAASLSGLPALHQKFDLP-APFVLHTDCPHYWRYAHPGETEEEYSTR 255
               YHG   S LI A  SG+        LP +P V             P    +   T 
Sbjct: 141 FIGCYHGHGDSLLIKAG-SGVAT----LGLPDSPGV-------------PEGVAKNTITV 182

Query: 256 LANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 313
             N+LE +    ++  + IA  I EPV G  GV+PP   + E ++ V ++   L I DEV
Sbjct: 183 AYNDLESVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEV 242

Query: 314 ICAFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAI--------LVSPEVSEVIH 363
           +  F R+   + C    Y + PDL    K +    +P+GA          V+P       
Sbjct: 243 MTGF-RVA--YNCGQGYYGVTPDLTCLGKVIGGG-LPVGAYGGKAEIMRQVAP------- 291

Query: 364 SQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA 417
                 G      T SG+P++ A   E L          +  + A   + G++ 
Sbjct: 292 -----SGPIYQAGTLSGNPLAMAAGYETLVQLTP-ESYVEFERKAEMLEAGLRK 339

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus} Length = 424

 Score =  108 bits (273), Expect = 7e-26
 Identities = 92/363 (25%), Positives = 145/363 (39%), Gaps = 86/363 (23%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTA-LGGSEPRLVAAATAQLNT-----LPFYH 136
           P  + + EG+YV+D +G +YLD     W    LG + P+++A     L        P   
Sbjct: 35  PPFLVRGEGAYVWDADGNRYLD-YVMSWGPLILGHAHPKVLARVRETLERGLTFGAP--- 90

Query: 137 SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK 196
                 +   + LAK++   +    +  V F NSG+EA  + ++L      A G   +  
Sbjct: 91  ------SPLEVALAKKVKRAYPF--VDLVRFVNSGTEATMSALRL------ARGYTGRPY 136

Query: 197 FIARQKSYHG---STLIAASLSGLPALHQKFDLP------APFVLHTDCPHYWRYAHPGE 247
            +  + +YHG     L+ A  SG         +P        +   T    Y        
Sbjct: 137 IVKFRGNYHGHADGLLVEAG-SGALT----LGVPSSAGVPEEYAKLTLVLEY-------- 183

Query: 248 TEEEYSTRLANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD 305
                     N+ E L  +LK   E IAA I EPV+G  GV+ P   + + +    K Y 
Sbjct: 184 ----------NDPEGLREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHE-AKAYG 232

Query: 306 ILFIADEVICAFGRLGTMFGC--DKYSIKPDLVSFAKALSSAYMPIGAI--------LVS 355
           +L IADEV+  F RL   FG   +   +KPDLV+  K L    +P  A          V+
Sbjct: 233 VLLIADEVMTGF-RLA--FGGATELLGLKPDLVTLGKILGGG-LPAAAYAGRREIMEKVA 288

Query: 356 PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV-EQVNKIAPKFQDG 414
           P            LG      T SG+P++ A  +  L++ +E       +  +  + + G
Sbjct: 289 P------------LGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAG 336

Query: 415 VKA 417
           +K 
Sbjct: 337 LKE 339

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2 Length = 467

 Score = 58.6 bits (141), Expect = 2e-09
 Identities = 33/256 (12%), Positives = 72/256 (28%), Gaps = 31/256 (12%)

Query: 162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH 221
              +   + G  A    +               K  +     +  +T     L+G  A+ 
Sbjct: 91  YDYIIPAHQGRGAE--NILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAI- 147

Query: 222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI 281
              ++       ++    W+                  L++ I + G + I A ++    
Sbjct: 148 ---NIVTEKAFDSETYDDWK-----------GDFDIKKLKENIAQHGADNIVAIVSTVTC 193

Query: 282 GAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF------GRLGTMFGCDKYSIKPDL 335
            + G  P   +  ++V  + K++ I  + D             R           +  D+
Sbjct: 194 NSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDM 253

Query: 336 VSFAKALS-----SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIE 390
             +A AL+        + IG ++   +  E+               TY G        + 
Sbjct: 254 YKYADALTMSAKKDPLLNIGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLA---GRDMA 310

Query: 391 ALKIYKERNIVEQVNK 406
           A+    E    E+   
Sbjct: 311 AMVQGLEEGTEEEYLH 326

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.4 bits (122), Expect = 6e-07
 Identities = 59/340 (17%), Positives = 99/340 (29%), Gaps = 98/340 (28%)

Query: 59  TTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLD-SLAGLWCTALGGS 117
           TT   +  D L+  T    S D H + +   E   +      KYLD     L    L  +
Sbjct: 271 TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLL----LKYLDCRPQDLPREVLTTN 326

Query: 118 EPRLVAAATAQLNTLPFYHSFW--------NRTTKPSLDL--AKELLEMFTASKMAKVFF 167
            PR ++     +         W            + SL++    E  +MF       VF 
Sbjct: 327 -PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMF---DRLSVF- 381

Query: 168 TNSGSEANDTQV-----KLVWYYN---------NALGRPNKKKFIARQK-----SYHGST 208
                      +      L+W+           N L   +K   + +Q      S     
Sbjct: 382 ------PPSAHIPTILLSLIWFDVIKSDVMVVVNKL---HKYSLVEKQPKESTISIPSIY 432

Query: 209 L-IAASLSGLPALHQK----------FDLPAPFVLHTDCPHYWRYAHPG------ETEEE 251
           L +   L    ALH+           FD       + D   Y+ Y+H G      E  E 
Sbjct: 433 LELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLD--QYF-YSHIGHHLKNIEHPER 489

Query: 252 YS--TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI 309
            +    +  +               F+ + +           +    +Q  +K Y   +I
Sbjct: 490 MTLFRMVFLDFR-------------FLEQKIRHDSTAWNASGSILNTLQ-QLKFYK-PYI 534

Query: 310 AD------EVICAFG----RLGTMFGCDKYSIKPDLVSFA 339
            D       ++ A      ++     C KY+   DL+  A
Sbjct: 535 CDNDPKYERLVNAILDFLPKIEENLICSKYT---DLLRIA 571

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	514
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	100.0
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	100.0
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	100.0
3hmu_A	472	Aminotransferase, class III; structural genomics,	100.0
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	100.0
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	100.0
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	100.0
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	100.0
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	100.0
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	100.0
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	100.0
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	100.0
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	100.0
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	100.0
1z7d_A	433	Ornithine aminotransferase; structural genomics co	100.0
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	100.0
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	100.0
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	100.0
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	100.0
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	100.0
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	100.0
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	100.0
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	100.0
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	100.0
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	100.0
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	100.0
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	100.0
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	100.0
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	100.0
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	100.0
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	100.0
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	100.0
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	100.0
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	100.0
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	100.0
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	100.0
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	100.0
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	100.0
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	100.0
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	100.0
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	100.0
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	100.0
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	100.0
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	100.0
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	100.0
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	100.0
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	100.0
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	100.0
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	99.97
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	99.97
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	99.97
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	99.97
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	99.96
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	99.96
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	99.96
3nra_A	407	Aspartate aminotransferase; structural genomics, j	99.96
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	99.96
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	99.96
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	99.96
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	99.96
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	99.96
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	99.92
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	99.96
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	99.96
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	99.95
1vp4_A	425	Aminotransferase, putative; structural genomics, j	99.95
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	99.95
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	99.95
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	99.95
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	99.95
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	99.95
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	99.95
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	99.95
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	99.95
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	99.95
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	99.95
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	99.95
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	99.95
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	99.95
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	99.95
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	99.95
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	99.95
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	99.95
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	99.95
3ele_A	398	Amino transferase; RER070207001803, structural gen	99.95
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	99.95
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	99.94
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	99.94
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	99.94
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	99.94
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	99.94
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	99.94
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	99.94
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.94
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	99.94
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	99.94
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	99.94
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	99.94
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	99.94
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	99.94
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	99.94
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	99.93
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	99.93
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	99.93
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	99.93
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	99.93
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	99.93
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	99.93
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	99.93
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	99.93
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.93
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	99.93
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	99.93
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	99.92
3rq1_A	418	Aminotransferase class I and II; structural genomi	99.92
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	99.92
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	99.92
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.92
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.92
1svv_A	359	Threonine aldolase; structural genomics, structura	99.92
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	99.92
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	99.92
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	99.92
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	99.91
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	99.91
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	99.91
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	99.91
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.91
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	99.91
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	99.91
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	99.9
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	99.9
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.9
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	99.9
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	99.9
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	99.9
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.9
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	99.9
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	99.9
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	99.89
1iug_A	352	Putative aspartate aminotransferase; wild type, py	99.89
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	99.89
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	99.89
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.89
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	99.89
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	99.89
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.89
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	99.89
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	99.89
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	99.89
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.89
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	99.89
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.89
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	99.89
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	99.88
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	99.88
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	99.88
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.88
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	99.88
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.87
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	99.87
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	99.87
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.87
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	99.86
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.86
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.86
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.86
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.86
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.85
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.85
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.85
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.85
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.85
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.85
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.85
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.85
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	99.84
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	99.84
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	99.84
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	99.84
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	99.84
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	99.83
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.83
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.83
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.83
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	99.83
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.83
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.83
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.82
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	99.82
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.81
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.81
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	99.8
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	99.8
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.8
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	99.79
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.79
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.79
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.79
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	99.79
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.78
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	99.77
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.76
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	99.74
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	99.73
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.72
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	99.71
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.71
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	99.71
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	99.71
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.7
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.7
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.7
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	99.69
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.69
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.68
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.67
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.67
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	99.66
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	99.66
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.65
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	99.64
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.62
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.57
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.55
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.54
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.52
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.51
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	99.51
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.49
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.48
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.47
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.4
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.4
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	99.3
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	98.72

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=100.00  E-value=1.6e-88  Score=710.62  Aligned_cols=438  Identities=40%  Similarity=0.796  Sum_probs=402.7

Q ss_pred             ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250           68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL  147 (514)
Q Consensus        68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~  147 (514)
                      .|+||++........|++|++|+|+||||+|||+||||.+|+|+++|||+||+|++|+.+|++++.+++.+++.++++..
T Consensus        35 ~~h~~t~~~~~~~~~P~vi~rg~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~  114 (473)
T 4e3q_A           35 SLYGFTDMPSLHQRGTVVVTHGEGPYIVDVNGRRYLDANSGLWNMVAGFDHKGLIDAAKAQYERFPGYHAFFGRMSDQTV  114 (473)
T ss_dssp             BCCSSCCHHHHHHHCCEEEEEEETTEEEETTCCEEEETTTTTTTCTTCSCCHHHHHHHHHHHHHCCCCCCCTTEEEHHHH
T ss_pred             cCCCCCChhhhccCCCEEEEeeecCEEEeCCCCEEEEcccCHHHhhccCCCHHHHHHHHHHHHhcccccccccccCHHHH
Confidence            57898875443345799999999999999999999999999999999999999999999999998877777777788899


Q ss_pred             HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250          148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP  227 (514)
Q Consensus       148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~  227 (514)
                      +|+++|++..+ .++++|+|+|||+||||.|||+||+|+.++++++|.+||.+.++|||+|.+++++++.+ ++..+.++
T Consensus       115 ~lAe~L~~~~p-~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~-~~~~~~~~  192 (473)
T 4e3q_A          115 MLSEKLVEVSP-FDSGRVFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKP-YNSVFGLP  192 (473)
T ss_dssp             HHHHHHHHHSS-CSSCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCG-GGGGGTCS
T ss_pred             HHHHHHHhhCC-CCccEEEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccc-cccccCCC
Confidence            99999999974 46889999999999999999999999999999999999999999999999999999865 56677888


Q ss_pred             CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCE
Q 010250          228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL  307 (514)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gil  307 (514)
                      .+...++++|++|++..+.+..+.+...+.+++++.+.+.+++++|+||+||+||++|+++|+++||++|+++|++||++
T Consensus       193 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gil  272 (473)
T 4e3q_A          193 LPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIP  272 (473)
T ss_dssp             CTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCC
T ss_pred             CCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceE
Confidence            88889999999999988888889999888999999999888889999999999999999999999999999999999999


Q ss_pred             EEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHH
Q 010250          308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV  387 (514)
Q Consensus       308 lI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aa  387 (514)
                      ||+|||||||||||++|+++++|+.||++|++|+|+||++|+|++++++++++.+.......+.+.|++||++||++|++
T Consensus       273 LI~DEV~tGfGRtG~~fa~e~~gv~PDi~t~~K~l~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aa  352 (473)
T 4e3q_A          273 VISDEVICGFGRTGNTWGCVTYDFTPDAIISSKNLTAGFFPMGAVILGPELSKRLETAIEAIEEFPHGFTASGHPVGCAI  352 (473)
T ss_dssp             EEEECTTTSSSTTSSSCHHHHTTCCCSEEEECGGGGTTSSCCEEEEECHHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHH
T ss_pred             EeccCccccCCcccchhHHHhcCCCCChHHhcccccCCCCCcccccccHHHHHHhccccccccccccCCCCCCCcchhhh
Confidence            99999999999999999999999999999999999999999999999999999886532223467899999999999999


Q ss_pred             HHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250          388 AIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM  467 (514)
Q Consensus       388 a~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv  467 (514)
                      |+++|++++++++.+++++++++|+++|+++.+.+.+.++||.|+|+++++..+.....++.........+...|+++|+
T Consensus       353 ala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gl  432 (473)
T 4e3q_A          353 ALKAIDVVMNEGLAENVRRLAPRFEERLKHIAERPNIGEYRGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGL  432 (473)
T ss_dssp             HHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTE
T ss_pred             hhhhhhhhccccHHHHHHHHHHHHHHHHHHHhcCCCeeEEeecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCc
Confidence            99999999999999999999999999999997778899999999999999988777777776666778889999999999


Q ss_pred             EEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250          468 LVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERV  507 (514)
Q Consensus       468 ~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~  507 (514)
                      ++++.|+.|||.||+++|++|||+++++|+++++++..++
T Consensus       433 l~~~~g~~i~l~PPL~it~~eid~~~~~l~~al~~v~ael  472 (473)
T 4e3q_A          433 ICRPLGQSVVLCPPFILTEAQMDEMFDKLEKALDKVFAEV  472 (473)
T ss_dssp             ECEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEecCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999887654

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=100.00  E-value=2.2e-79  Score=639.15  Aligned_cols=417  Identities=26%  Similarity=0.452  Sum_probs=356.6

Q ss_pred             cccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC
Q 010250           54 QKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP  133 (514)
Q Consensus        54 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~  133 (514)
                      ++..+..+++.+..+..+          +|+++++|+|+|+||+|||+||||++|+|+++|||+||+|++|+.+|++++.
T Consensus        28 ~~l~~r~~~~~~~~~~~~----------~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~   97 (456)
T 4atq_A           28 QALAERRSAVVAAGVASG----------VPVYVEDADGGIIRDVDGNSFIDLGSGIAVTSVGASDPAVVAAVQEAAAHFT   97 (456)
T ss_dssp             HHHHHHHHHHBCTTCCCS----------CSSCEEEEETTEEEETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCS
T ss_pred             HHHHHHHHHhCCCCCCCC----------CCCeEEeeecCEEEeCCCCEEEEccccHHHHhcCCCCHHHHHHHHHHHhhcc
Confidence            444555666665554333          7899999999999999999999999999999999999999999999999875


Q ss_pred             ccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee
Q 010250          134 FYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS  213 (514)
Q Consensus       134 ~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~  213 (514)
                      +. .++..+++...+|+++|+++++...+++|+|+|||+||||.|||+||.|      ++|.+||.|+++|||+|.++++
T Consensus        98 ~~-~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~------t~r~~ii~~~~~yHG~t~~als  170 (456)
T 4atq_A           98 HT-CFMVTPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLA------TGRDAVVAFDHAYHGRTNLTMA  170 (456)
T ss_dssp             CC-TTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHH------HCCCEEEEETTCCCCSSHHHHH
T ss_pred             Cc-ccCccCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhh------hcCCeEEEEecccCCccccccc
Confidence            53 3334567888999999999986556889999999999999999999988      5688999999999999999999


Q ss_pred             cCCCcc-ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChh
Q 010250          214 LSGLPA-LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPAT  292 (514)
Q Consensus       214 ~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~  292 (514)
                      +++.+. ++..+++..+.+.+++++..++...+..+..+......+.+++   ..+++++|+||+||+||++|+++|+++
T Consensus       171 ~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~---~~~~~~iAAvivEPiqg~gG~~~p~~~  247 (456)
T 4atq_A          171 LTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEK---QIGGDQVAAIIIEPIQGEGGFIVPAEG  247 (456)
T ss_dssp             HCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHH---HTCGGGEEEEEECSSBTTTTCBCCCTT
T ss_pred             cccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHH---hhcCCceEEEEeccccCCCCccccchh
Confidence            888764 4556666667788888888777766665555444433344433   334678999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcc
Q 010250          293 YFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF  372 (514)
Q Consensus       293 ~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~  372 (514)
                      ||++|+++|++||++||+|||||||||+|++|+++++|+.|||+|+||+++|| +|+|++++++++++.+.       ..
T Consensus       248 fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~gK~lggg-~P~~av~~~~~i~~~~~-------~~  319 (456)
T 4atq_A          248 FLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMAKGIAGG-LPLSAITGRADLLDAVH-------PG  319 (456)
T ss_dssp             HHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEECGGGGTT-SSCEEEEEEHHHHTTSC-------TT
T ss_pred             hhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhhhhcccCc-CCceeeEecHHHHhccc-------cc
Confidence            99999999999999999999999999999999999999999999999999988 79999999999999886       34


Q ss_pred             cccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cC-----CCceeEEEeeeeeEEEEEccCCCCCC
Q 010250          373 SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SD-----SPIIGEIRGTGLILGTEFADNKSPNE  446 (514)
Q Consensus       373 ~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~-----~~~~~~v~g~g~~~~i~~~~~~~~~~  446 (514)
                      .|++||++||++|++++++|++++++++.+++++++++++++|+++ .+     ++++.+|||.|+|++++|.++... .
T Consensus       320 ~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~-~  398 (456)
T 4atq_A          320 GLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSK-E  398 (456)
T ss_dssp             SSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSC-C
T ss_pred             CCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecceEEEEEEecCCCC-C
Confidence            6899999999999999999999999999999999999999999987 33     478999999999999999865321 1


Q ss_pred             CCCCccchHHHHHHHHHHCCcEEEeeC---CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          447 PFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       447 ~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                         ........+...|+++|+++.+.|   +.|||.||+++|++|||+++++|+++|+.
T Consensus       399 ---~~~~~~~~v~~~~~~~Gvl~~~~g~~~~~irl~PpL~it~~~id~~l~~l~~al~a  454 (456)
T 4atq_A          399 ---PNAELTKAVAAACLKEGVIILTCGTYGNVIRLLPPLVISDELLIDGLEVLAAAIKA  454 (456)
T ss_dssp             ---BCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             ---cCHHHHHHHHHHHHHCCCEEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence               123356778999999999988654   67999999999999999999999999975

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=100.00  E-value=1.2e-71  Score=588.63  Aligned_cols=438  Identities=31%  Similarity=0.583  Sum_probs=381.6

Q ss_pred             ccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCch
Q 010250           66 HDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKP  145 (514)
Q Consensus        66 ~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~  145 (514)
                      ..+|+||++........|+++++++|+|+||.|||+||||++|+|+++|||+||+|++|+.+|++++.+++.+ .++++.
T Consensus        20 ~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~-~~~~~~   98 (476)
T 3i5t_A           20 DHILLPAQEMAKLGKSAQPVLTHAEGIYVHTEDGRRLIDGPAGMWCAQVGYGRREIVDAMAHQAMVLPYASPW-YMATSP   98 (476)
T ss_dssp             HHBCCTTEEGGGTTTCCCCBEEEEEBTEEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTT-TCBCHH
T ss_pred             cccccCcccccccccCCCeeEEEeecCEEEECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcccC-ccCCHH
Confidence            3468898875544445789999999999999999999999999999999999999999999999987665443 457788


Q ss_pred             HHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCC
Q 010250          146 SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD  225 (514)
Q Consensus       146 ~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~  225 (514)
                      ..+|+++|++.++ .++++|+|+|||+|||+.|+|+++.|+..++.+++++||+++++|||++.+++++++.+.++..+.
T Consensus        99 ~~~la~~l~~~~~-~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~  177 (476)
T 3i5t_A           99 AARLAEKIATLTP-GDLNRIFFTTGGSTAVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFD  177 (476)
T ss_dssp             HHHHHHHHHTTSS-TTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSC
T ss_pred             HHHHHHHHHhcCC-CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccC
Confidence            9999999999874 467899999999999999999999998888888899999999999999999999999988888888


Q ss_pred             CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC
Q 010250          226 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD  305 (514)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g  305 (514)
                      ++.+.+.++++|..|+.  .+.+.+.+...++++||+++.+.+++++++||+||+++++|+++|+++||++|+++|++||
T Consensus       178 ~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~g  255 (476)
T 3i5t_A          178 IAQDRISFLSSPNPRHA--GNRSQEAFLDDLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHD  255 (476)
T ss_dssp             CCCTTEEEECCCCGGGC--TTSCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTT
T ss_pred             CCCCCcEEeCCCccccc--CCCchHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcC
Confidence            77777888888887776  4456677877788999999987666789999999999999999999999999999999999


Q ss_pred             CEEEEechhcCcccccccceec-ccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHH
Q 010250          306 ILFIADEVICAFGRLGTMFGCD-KYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS  384 (514)
Q Consensus       306 illI~DEv~tG~gr~G~~~~~~-~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~  384 (514)
                      ++||+||||+||||+|++|+++ ++++.||++||||+|+||++|+|++++++++++.+.......+.+.+++||++||++
T Consensus       256 illI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t~sK~l~~G~~plg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~np~a  335 (476)
T 3i5t_A          256 ILYISDEVVTGFGRCGEWFASEKVFGVVPDIITFAKGVTSGYVPLGGLAISEAVLARISGENAKGSWFTNGYTYSNQPVA  335 (476)
T ss_dssp             CEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEEECGGGGTTSSCCEEEEECHHHHHTTSGGGCTTCEECCCCTTTTCHHH
T ss_pred             CEEEEEecccCCccccCceeeecccCCCcchhhhhhhhcCCCcCeEEEEECHHHHHHHhcCCcccccccccCCCCcCHHH
Confidence            9999999999999999988888 999999999999999998789999999999999987532222356788999999999


Q ss_pred             HHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH
Q 010250          385 CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK  464 (514)
Q Consensus       385 ~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~  464 (514)
                      |++++++|+.++++++.++++++++++++.|+++.+++.+..+++.|+|+++++.+...+..++.........+.+.|++
T Consensus       336 ~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~  415 (476)
T 3i5t_A          336 CAAALANIELMEREGIVDQAREMADYFAAALASLRDLPGVAETRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFE  415 (476)
T ss_dssp             HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCC-----CCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCceeEEEEecCccccccccchhHHHHHHHHHHHH
Confidence            99999999999888999999999999999999876778899999999999999976543333222222235678889999


Q ss_pred             CCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250          465 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERV  507 (514)
Q Consensus       465 ~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~  507 (514)
                      +||++.+.|+.|||+||+++|+++|++++++|+++++++.++.
T Consensus       416 ~Gv~v~~~g~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~~~  458 (476)
T 3i5t_A          416 LGLIVRPLGDLCVISPPLIISRAQIDEMVAIMRQAITEVSAAH  458 (476)
T ss_dssp             TTEECEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence            9999999889999999999999999999999999998877543

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=100.00  E-value=6e-72  Score=590.12  Aligned_cols=435  Identities=38%  Similarity=0.727  Sum_probs=379.0

Q ss_pred             cccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchH
Q 010250           67 DMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS  146 (514)
Q Consensus        67 ~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~  146 (514)
                      .+|+||+.........|+++++++|+|+||.|||+||||++|+|+++|||+||+|++|+.+|++++.+.+++..++++..
T Consensus        22 ~~~~~~~~~~~~~~~~p~~~~~~~G~~l~d~~G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~  101 (472)
T 3hmu_A           22 HHLHPFSANNALGEEGTRVITRARGVWLNDSEGEEILDAMAGLWCVNIGYGRDELAEVAARQMRELPYYNTFFKTTHVPA  101 (472)
T ss_dssp             HEECTTEEHHHHHHHCCEEEEEEEBTEEEETTCCEEECTTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCSSSSEECHHH
T ss_pred             hccCCcccccccccCCCeeEEEeecCEEEECCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccccccccccCCHHH
Confidence            36788875322222368999999999999999999999999999999999999999999999998764444445577888


Q ss_pred             HHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCC
Q 010250          147 LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDL  226 (514)
Q Consensus       147 ~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~  226 (514)
                      .+|+++|+++++ .++++|+|+|||+|||+.|+|+++.|+..++.+++++||+++++|||++.+++++++.+.++..|. 
T Consensus       102 ~~lae~l~~~~~-~~~~~v~~~~sGseA~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~-  179 (472)
T 3hmu_A          102 IALAQKLAELAP-GDLNHVFFAGGGSEANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSG-  179 (472)
T ss_dssp             HHHHHHHHHHSC-TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTC-
T ss_pred             HHHHHHHHHhCC-CCCCEEEEeCCHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccC-
Confidence            999999999974 467899999999999999999999998888888899999999999999999999999888887888 


Q ss_pred             CCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCC
Q 010250          227 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDI  306 (514)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gi  306 (514)
                      +.+.+.+++.|..|+.... .+.+.+...++++|++++.+..++++++||+||+++++|+++|+++||++|+++|++||+
T Consensus       180 ~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gi  258 (472)
T 3hmu_A          180 LIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDI  258 (472)
T ss_dssp             CCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTC
T ss_pred             CCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCC
Confidence            7777788888876664333 556777777789999999876667899999999999999999999999999999999999


Q ss_pred             EEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHH
Q 010250          307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA  386 (514)
Q Consensus       307 llI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~a  386 (514)
                      +||+||||+||||+|++|+++++++.||++||||+|+||++|+|++++++++++.+..     +.+.+++||++||++|+
T Consensus       259 llI~DEv~~gfgr~G~~~a~~~~~v~pdi~t~sK~l~gg~~plG~v~~~~~i~~~~~~-----~~~~~~~t~~~np~a~a  333 (472)
T 3hmu_A          259 LLIADEVICGFGRTGNWFGTQTMGIRPHIMTIAKGLSSGYAPIGGSIVCDEVAHVIGK-----DEFNHGYTYSGHPVAAA  333 (472)
T ss_dssp             EEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSSCCEEEEEEHHHHHHHTT-----SCBCCCCTTTTCHHHHH
T ss_pred             EEEEEccccCCcccCccchhHHhCCCCceeeechhhhcCCcceEEEEECHHHHHhccc-----CCccccCCCCCCHHHHH
Confidence            9999999999999999999999999999999999999998999999999999999842     35678899999999999


Q ss_pred             HHHHHHHHHhhccHHHHHH-HHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCc-cchHHHHHHHHHH
Q 010250          387 VAIEALKIYKERNIVEQVN-KIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPE-WGIGAYFGAQCEK  464 (514)
Q Consensus       387 aa~aal~~~~~~~~~~~~~-~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~l~~  464 (514)
                      +++++|+.++++++.++++ ++++++++.|+++.+++.+..+++.|+++++++..+.....++... ......+.+.|++
T Consensus       334 Aa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  413 (472)
T 3hmu_A          334 VALENLRILEEENILDHVRNVAAPYLKEKWEALTDHPLVGEAKIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFA  413 (472)
T ss_dssp             HHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGGSTTEEEEEEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCceEEEEEecCccccccccchhHHHHHHHHHHHHH
Confidence            9999999998889999999 9999999999888667889999999999999997543333333222 2345678899999


Q ss_pred             CCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 010250          465 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVKE  509 (514)
Q Consensus       465 ~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~~~  509 (514)
                      +||++++.|+.|||+||+++|++||++++++|+++++++.+++..
T Consensus       414 ~Gv~v~~~g~~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~~~~~~  458 (472)
T 3hmu_A          414 NNLIMRHVGDRMIISPPLVITPAEIDEMFVRIRKSLDEAQAEIEK  458 (472)
T ss_dssp             TTBCCEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999988999999999999999999999999999988776544

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=100.00  E-value=6.9e-72  Score=580.11  Aligned_cols=409  Identities=19%  Similarity=0.302  Sum_probs=341.9

Q ss_pred             cccccccccccccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHH
Q 010250           44 ARFYGTDASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVA  123 (514)
Q Consensus        44 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~  123 (514)
                      .|+......+++..+..+++.+....+|++..    .++|+++++|+|+||||+|||+||||++++|+++|||+||+|++
T Consensus        35 ~~~~~~~p~s~~~~~~a~~~~pgg~~~~~~~~----~~~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~hp~v~~  110 (454)
T 4ao9_A           35 RRFTDANPASQRQFEAQARYMPGANSRSVLFY----APFPLTIARGEGAALWDADGHRYADFIAEYTAGVYGHSAPEIRD  110 (454)
T ss_dssp             HHHHHHCHHHHHHHHHHTTTSGGGCSSGGGCC----SSCCCEEEEEETTEEEETTCCEEEESSGGGGTTTTCSCCHHHHH
T ss_pred             HHHhhcCcHhHHHHHHHhhhCCCCCCCCcccc----CCCCccEEEeecCEEEECCCCEEEEccccHHhhcccCCCHHHHH
Confidence            45545556667777778889887777776643    34799999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecC
Q 010250          124 AATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKS  203 (514)
Q Consensus       124 A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~  203 (514)
                      |+.+|++++.+.    ..++....+++++|++.++  ++++|+|+|||+|||+.|||+||.|      ++|++||.|+++
T Consensus       111 Av~~q~~~~~~~----~~~~~~~~~lae~l~~~~p--~~~~v~f~~SGsEA~e~AiklAr~~------tgr~~ii~~~~~  178 (454)
T 4ao9_A          111 AVIEAMQGGINL----TGHNLLEGRLARLICERFP--QIEQLRFTNSGTEANLMALTAALHF------TGRRKIVVFSGG  178 (454)
T ss_dssp             HHHHHHHTCSCC----CSEESSHHHHHHHHHHHST--TCSEEEEESSHHHHHHHHHHHHHHH------HTCCEEEEETTC
T ss_pred             HHHHHHhcCCCc----cCCcHHHHHHHHHHHHhCC--CCCEEEEeCchHHHHHHHHHHHHhc------ccCCeEEEEeCC
Confidence            999999876443    2345677899999999985  5789999999999999999999988      478899999999


Q ss_pred             CcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCC
Q 010250          204 YHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGA  283 (514)
Q Consensus       204 yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~  283 (514)
                      |||++.+..+.++....      +... ..+  |                .++++.+++++.+.. +++++||+||++|+
T Consensus       179 yHG~t~~~~~~~~~~~~------~~~~-~~~--p----------------~nd~~~l~~~l~~~~-~~iAavIvEPv~g~  232 (454)
T 4ao9_A          179 YHGGVLGFGARPSPTTV------PFDF-LVL--P----------------YNDAQTARAQIERHG-PEIAVVLVEPMQGA  232 (454)
T ss_dssp             BCSTTCBBSSSBCTTSC------CSEE-EEE--C----------------TTCHHHHHHHHHHTG-GGEEEEEECSEEST
T ss_pred             cCCccccccccccCccC------CCCc-ccC--C----------------CchHHHHHHHHhhcC-CceEEEEeccccCC
Confidence            99999877665443221      1110 111  1                122577888887654 57999999999999


Q ss_pred             CCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhh
Q 010250          284 GGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIH  363 (514)
Q Consensus       284 ~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~  363 (514)
                      +|+++|+++||++|+++|++||++||+|||||  ||+|++|+++++|++||++|+||+|+|| +|+|++++++++++.+.
T Consensus       233 ~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~t--GR~G~~~a~e~~gv~PDi~t~gK~lggG-~Piga~~~~~ei~~~~~  309 (454)
T 4ao9_A          233 SGCIPGQPDFLQALRESATQVGALLVFDEVMT--SRLAPHGLANKLGIRSDLTTLGKYIGGG-MSFGAFGGRADVMALFD  309 (454)
T ss_dssp             TTCEECCHHHHHHHHHHHHHHTCEEEEECTTG--GGGSTTCHHHHHTCCCSEEEEEGGGGTT-SSCEEEEECHHHHGGGC
T ss_pred             CCccCCchhhHHHHHHHHhhcCCEEEEECCCc--CCCccccchhccCCCCcEEEeccccCCC-CcceeeeeHHHHHHHHh
Confidence            99999999999999999999999999999999  5999999999999999999999999999 79999999999999986


Q ss_pred             hccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCC
Q 010250          364 SQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNK  442 (514)
Q Consensus       364 ~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~  442 (514)
                      +.   .+.+.|++||++||++|++++++|++++++++.+++++++++|+++|+++ .+++++.+++|.|+|++++|.+..
T Consensus       310 ~~---~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G~m~gi~f~~~~  386 (454)
T 4ao9_A          310 PR---TGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAMQFTGIGSLMNAHFVQGD  386 (454)
T ss_dssp             TT---TCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEEETTEEEEESCCSC
T ss_pred             hc---cCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCEEEeeeceEEEEEEecCC
Confidence            42   24668999999999999999999999998899999999999999999998 667899999999999999997643


Q ss_pred             CCCC--CCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          443 SPNE--PFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       443 ~~~~--~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ....  ....+......+...|+++||++.|.+   ++.+++.+|++|||+++++|++++.+.
T Consensus       387 ~~~~~~~~~~d~~~~~~~~~~ll~~Gv~~~p~~---~~~~s~~~T~~dId~~l~al~~~l~~~  446 (454)
T 4ao9_A          387 VRSSEDLAAVDGRLRQLLFFHLLNEDIYSSPRG---FVVLSLPLTDADIDRYVAAIGSFIGGH  446 (454)
T ss_dssp             CCSGGGGTTCCHHHHHHHHHHHHHTTEECCTTC---EEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred             CCCHHHHHhhhHHHHHHHHHHHHHCCEEEcCCC---CEEEeCCCCHHHHHHHHHHHHHHHHhc
Confidence            2211  111233345667888999999998765   345667799999999999999999764

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=100.00  E-value=3.4e-68  Score=560.39  Aligned_cols=438  Identities=38%  Similarity=0.704  Sum_probs=368.5

Q ss_pred             CccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCc
Q 010250           65 GHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK  144 (514)
Q Consensus        65 ~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~  144 (514)
                      ...+|+||++........|+++++|+|+|+||.||++||||.+++|+++|||+||+|++|+.++++++.+.++...++++
T Consensus        15 ~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~   94 (459)
T 4a6r_A           15 AAHHLHPFTDTASLNQAGARVMTRGEGVYLWDSEGNKIIDGMAGLWCVNVGYGRKDFAEAARRQMEELPFYNTFFKTTHP   94 (459)
T ss_dssp             -------------------CCEEEEEBTEEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCSCCCTTSSSCCH
T ss_pred             hhhccCCccccccccccCCeeEEEeecCEEEECCCCEEEECCCchhcccCCCCCHHHHHHHHHHHHhccccccccccCCH
Confidence            34468888764433344789999999999999999999999999999999999999999999999987644444455778


Q ss_pred             hHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCC
Q 010250          145 PSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKF  224 (514)
Q Consensus       145 ~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~  224 (514)
                      ...+++++|++.++ .+.++|+|++||+||++.|+++++.|+..++.+++++||+++++|||++.+++++++.+.++..+
T Consensus        95 ~~~~la~~l~~~~~-~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~  173 (459)
T 4a6r_A           95 AVVELSSLLAEVTP-AGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQG  173 (459)
T ss_dssp             HHHHHHHHHHHHSC-TTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---
T ss_pred             HHHHHHHHHHHhCC-CCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhcccc
Confidence            88999999999874 46789999999999999999999998888888889999999999999999999999988888778


Q ss_pred             CCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc
Q 010250          225 DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY  304 (514)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~  304 (514)
                      .+..+.+.++++|..|+.... .+.+.+...++++|++++.+..++++++|++||+++++|+++|+++||++|+++|++|
T Consensus       174 ~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~  252 (459)
T 4a6r_A          174 DLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKY  252 (459)
T ss_dssp             CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHT
T ss_pred             CCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHc
Confidence            777777778888876664433 5667777777899999988766678999999999999999999999999999999999


Q ss_pred             CCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHH
Q 010250          305 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS  384 (514)
Q Consensus       305 gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~  384 (514)
                      |++||+||||+||||+|++++++++++.||++||||+|+||++|+|++++++++++.+...    +.+.+++||++||++
T Consensus       253 ~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t~sK~l~gg~~~lg~v~~~~~i~~~~~~~----~~~~~~~t~~~~~~~  328 (459)
T 4a6r_A          253 DVLLVADEVICGFGRTGEWFGHQHFGFQPDLFTAAKGLSSGYLPIGAVFVGKRVAEGLIAG----GDFNHGFTYSGHPVC  328 (459)
T ss_dssp             TCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSSCCEEEEECHHHHHHHHHH----CTTHHHHHHCSCHHH
T ss_pred             CCEEEEeccccCCCcccccchHhhcCCCCCeeehhhhhcCCCCCccceeeCHHHHHHhhcC----CCcccCCCCCCCHHH
Confidence            9999999999999999998889999999999999999999989999999999999988632    244678899999999


Q ss_pred             HHHHHHHHHHHhhccHHHHHH-HHHHHHHhhh-hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH
Q 010250          385 CAVAIEALKIYKERNIVEQVN-KIAPKFQDGV-KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC  462 (514)
Q Consensus       385 ~aaa~aal~~~~~~~~~~~~~-~~~~~l~~~L-~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l  462 (514)
                      |++++++|+.++++++.++++ ++++++++.| +.+.+++.+..+++.|+++++++........++.........+.+.|
T Consensus       329 ~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  408 (459)
T 4a6r_A          329 AAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDVRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIF  408 (459)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEEEEecCccccccccchHHHHHHHHHHH
Confidence            999999999998889999999 9999999999 67777788999999999999999765444444443334467788999


Q ss_pred             HHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 010250          463 EKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEERVK  508 (514)
Q Consensus       463 ~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~~  508 (514)
                      +++||++++.|+.|||+||+++|+++|++++++|+++++++.+++.
T Consensus       409 ~~~Gv~v~~~g~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~~~  454 (459)
T 4a6r_A          409 FRNNLIMRACGDHIVSAPPLVMTRAEVDEMLAVAERCLEEFEQTLK  454 (459)
T ss_dssp             HHTTEECEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHCCeEEecCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998899999999999999999999999999998876554

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=100.00  E-value=2.1e-68  Score=562.07  Aligned_cols=439  Identities=40%  Similarity=0.740  Sum_probs=381.1

Q ss_pred             ccccCCcccc--ccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCC
Q 010250           66 HDMLAPFTAG--WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTT  143 (514)
Q Consensus        66 ~~~~~p~~~~--~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~  143 (514)
                      ..+|+||++.  |....++|+++++++|+|+||.||++||||.+|+|+++|||+||+|++|+.++++++.+.++...+++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~p~~~~~~~G~~~~d~~G~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~   94 (460)
T 3gju_A           15 DHFFHPSTHMGTHARGESPTRIMAGGEGVTVWDNNGRKSIDAFAGLYCVNVGYGRQKIADAIATQAKNLAYYHAYVGHGT   94 (460)
T ss_dssp             HHCCCTTSCHHHHHHTCSCCCCEEEEEBTEEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHHSCCCCCTTCCC
T ss_pred             cccccCccccccccccCCCceEEEEeeccEEEECCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccccccccccCC
Confidence            3468888753  22234467999999999999999999999999999999999999999999999988664444445677


Q ss_pred             chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250          144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK  223 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~  223 (514)
                      +...+++++|+++++ .+.++|+|+|||+||++.|+++++.|+..++.+++++||+++++|||++.+++++++.+.++..
T Consensus        95 ~~~~~la~~l~~~~~-~~~~~v~~~~gGseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~  173 (460)
T 3gju_A           95 EASITLAKMIIDRAP-KGMSRVYFGLSGSDANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNA  173 (460)
T ss_dssp             HHHHHHHHHHHHHSC-TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTT
T ss_pred             HHHHHHHHHHHhhCC-CCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccc
Confidence            888999999999863 4678999999999999999999999988888888999999999999999999999998888888


Q ss_pred             CCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh
Q 010250          224 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK  303 (514)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~  303 (514)
                      +....+.+.+++.|..|+++..+.+.+++...++++|++++.+.+++++++|++||+++++|+++++++||++|+++|++
T Consensus       174 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~  253 (460)
T 3gju_A          174 FDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKK  253 (460)
T ss_dssp             TTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHH
T ss_pred             cCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHH
Confidence            88777778888888888877666777788888889999998876667899999999999999999999999999999999


Q ss_pred             cCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHH
Q 010250          304 YDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPV  383 (514)
Q Consensus       304 ~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl  383 (514)
                      ||++||+||||+||||+|++++++++++.||++||||+|+||++|+|++++++++++.+.......+.+.+++||++||+
T Consensus       254 ~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~sK~l~gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~~~~t~~~~~~  333 (460)
T 3gju_A          254 YDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLITIAKGLTSAYAPLSGVIVADRVWQVLVQGSDKLGSLGHGWTYSAHPI  333 (460)
T ss_dssp             TTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEECGGGTTTSSCCEEEEEEHHHHHHHHHHHHHHCSCSCCCTTTTCHH
T ss_pred             cCCEEEEeccccCCCcccccchHhhcCCCCCeeeeehhhcCCCCCeEEEEECHHHHHHHhcccccccccccCCCCCCCHH
Confidence            99999999999999999998889999999999999999999978999999999999998531000124578899999999


Q ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH
Q 010250          384 SCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC  462 (514)
Q Consensus       384 ~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l  462 (514)
                      +|++++++|+.++++++.++++++++++++.|.+. .+++.+..+++.|+++++++.+......++.........+.+.|
T Consensus       334 ~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  413 (460)
T 3gju_A          334 CVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEVRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATAL  413 (460)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeeEEEEEEEccCccccccccchHHHHHHHHHHH
Confidence            99999999999988899999999999999999654 67788999999999999999865444444443344567788999


Q ss_pred             HHCCcEEEeeC--CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          463 EKHGMLVRVSG--DNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       463 ~~~Gv~~~~~g--~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      +++||++++.+  +.|||+||+++|+++|++++++|+++++++.+
T Consensus       414 ~~~Gv~v~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~  458 (460)
T 3gju_A          414 AASGVIGRAMPQGDILGFAPPLCLTREQADIVVSKTADAVKSVFA  458 (460)
T ss_dssp             HHTTEECEECSSSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC
T ss_pred             HHCCeEEecCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            99999999876  78999999999999999999999999987653

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=100.00  E-value=9.9e-70  Score=603.44  Aligned_cols=435  Identities=21%  Similarity=0.290  Sum_probs=348.1

Q ss_pred             cCccccCCccccccCCCCCCeEEEeeeCc--EEEeCCCC----EEEEccCCcccccCCCC-CHHHHHHHHHHHhcCCccc
Q 010250           64 KGHDMLAPFTAGWQSTDVHPLVIEKSEGS--YVYDVNGK----KYLDSLAGLWCTALGGS-EPRLVAAATAQLNTLPFYH  136 (514)
Q Consensus        64 ~~~~~~~p~~~~~~~~~~~p~~~~~~~G~--~~~d~dG~----~ylD~~s~~~~~~lGh~-~p~v~~A~~~~l~~~~~~~  136 (514)
                      .....|+||++........|++|++|+|.  |+||.|||    +|||++||+|++++||+ ||+|++|+.+|++++.+. 
T Consensus       338 ~~~~~whp~t~~~~~~~~~p~~i~~a~G~g~~l~D~dG~~~~~~ylD~~sg~~~~~lGh~~~p~i~~Ai~~Q~~~l~h~-  416 (831)
T 4a0g_A          338 AGEVFWWPFTQHKLVHQETVTVIDSRCGENFSIYKASDNSSLSQQFDACASWWTQGPDPTFQAELAREMGYTAARFGHV-  416 (831)
T ss_dssp             HHHHBCCTTCCGGGCCGGGCEEEEEEETTEEEEEEHHHHSEEEEEEETTHHHHTCCCCHHHHHHHHHHHHHHHHHHSSC-
T ss_pred             hhhhccCCccCcccccCCCCeEEEEeeccceEEEECCCCccchheeeecccHhhcCCCCCCCHHHHHHHHHHHhhcccc-
Confidence            33457999988643333468999999995  99999999    99999999999999999 999999999999987654 


Q ss_pred             cccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHH-HHHHhhcCCC--------CccEEEEEecCCccc
Q 010250          137 SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLV-WYYNNALGRP--------NKKKFIARQKSYHGS  207 (514)
Q Consensus       137 ~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a-~~~~~~~~~~--------~~~~ii~~~~~yHG~  207 (514)
                      .+.+.++++..+|+++|+++++...+++|+|+|||+||||.|||+| ++|+...+.+        +|.+||+++++|||.
T Consensus       417 ~~~~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~  496 (831)
T 4a0g_A          417 MFPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGD  496 (831)
T ss_dssp             CCTTEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCS
T ss_pred             cccccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccC
Confidence            2334578899999999999985434789999999999999999999 6777665542        588999999999999


Q ss_pred             ceeeeecCCCccccC--------CCCC--CC------CcccccCCCCcccCCCCCC----C----------hhHHHHHHH
Q 010250          208 TLIAASLSGLPALHQ--------KFDL--PA------PFVLHTDCPHYWRYAHPGE----T----------EEEYSTRLA  257 (514)
Q Consensus       208 t~~~~~~s~~~~~~~--------~~~~--~~------~~~~~~~~~~~~~~~~~~~----~----------~~~~~~~~~  257 (514)
                      |++++++++.+.++.        ++++  +.      +.+.++++|+.|+...+++    +          .+.+...+.
T Consensus       497 T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  576 (831)
T 4a0g_A          497 TLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYS  576 (831)
T ss_dssp             SHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHH
T ss_pred             ceeeeeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHH
Confidence            999999999766554        1111  11      1234566776665432221    1          112334456


Q ss_pred             HHHHHHHHH----hCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC
Q 010250          258 NNLEDLILK----EGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK  332 (514)
Q Consensus       258 ~~le~li~~----~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~  332 (514)
                      ++|++++.+    .+++++++||+||+ ||++|+++|+++||++|+++|++||++||+|||||||||+|++|+++++|+.
T Consensus       577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~  656 (831)
T 4a0g_A          577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCK  656 (831)
T ss_dssp             HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSC
T ss_pred             HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCC
Confidence            778887753    34678999999997 9999999999999999999999999999999999999999999999999999


Q ss_pred             CchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 010250          333 PDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQ  412 (514)
Q Consensus       333 pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~  412 (514)
                      ||++|+||+|+|||+|+|++++++++++.+.... ..+.+.|++||++||++|++++++|++++++++.+++++++++++
T Consensus       657 PDiitlsK~L~gG~~Plgav~~~~~i~~~~~~~~-~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~  735 (831)
T 4a0g_A          657 PDIACFAKLLTGGMVPLAVTLATDAVFDSFSGDS-KLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLR  735 (831)
T ss_dssp             CSEEEECGGGGTTSSCCEEEEECHHHHHTTCSSC-GGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBC
T ss_pred             CcEEEEecccccCccCcEEEEECHHHHHHHhccc-ccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            9999999999999889999999999999986421 223567999999999999999999999988888888877777665


Q ss_pred             hh----h-hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHH
Q 010250          413 DG----V-KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPE  487 (514)
Q Consensus       413 ~~----L-~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e  487 (514)
                      +.    + +.+.+++.+.+++|.|+|+++++..+.... ++  ....+..+...|+++||++.+.++.|||+||+.+|++
T Consensus       736 ~~l~~~l~~~l~~~~~v~~vrg~Gl~~~iel~~~~~~~-~~--~~~~a~~~~~~l~e~Gv~v~p~g~~lrl~pp~~~t~e  812 (831)
T 4a0g_A          736 ELWDEELVQQISSHSAVQRVVVIGTLFALELKADASNS-GY--ASLYAKSLLIMLREDGIFTRPLGNVIYLMCGPCTSPE  812 (831)
T ss_dssp             CCSCHHHHHHHHHSTTEEEEEEETTEEEEEEC------------CHHHHHHHHHHHHTTEECCCBTTEEEEECCTTCCHH
T ss_pred             HHHHHHHHHHHhhCCCceeEeecccEEEEEEecCcccc-cc--chHHHHHHHHHHHHCCcEEEecCCEEEEECCCCCCHH
Confidence            42    2 233456899999999999999997643211 11  1223567889999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010250          488 EVDELISKYGKALKAT  503 (514)
Q Consensus       488 ~id~~~~~l~~~l~~~  503 (514)
                      ||++++++|+++++++
T Consensus       813 ~id~~~~~l~~~l~~l  828 (831)
T 4a0g_A          813 ICRRLLTKLYKRLGEF  828 (831)
T ss_dssp             HHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999988643

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=100.00  E-value=3e-65  Score=536.30  Aligned_cols=432  Identities=31%  Similarity=0.574  Sum_probs=345.3

Q ss_pred             cccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchH
Q 010250           67 DMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS  146 (514)
Q Consensus        67 ~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~  146 (514)
                      .+|+|+++.... ...|+++++|+|+|+||.|||+||||.+++|+++|||+||+|++|+.++++++.+++. ..++++..
T Consensus        12 ~~~~~~~~~~~~-~~~p~~~~~g~G~~v~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~~~-~~~~~~~~   89 (448)
T 3dod_A           12 HLWLPFTQMKDY-DENPLIIESGTGIKVKDINGKEYYDGFSSVWLNVHGHRKKELDDAIKKQLGKIAHSTL-LGMTNVPA   89 (448)
T ss_dssp             HBCCTTCCHHHH-HHSCCEEEEEEBTEEEETTSCEEEETTHHHHTCSSCBSCHHHHHHHHHHHTTCSCCCC-SSSEEHHH
T ss_pred             cccccccccccc-cCCCceEEEeeeCEEEECCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCccc-cccCCHHH
Confidence            367887652111 2368999999999999999999999999999999999999999999999988755432 24466788


Q ss_pred             HHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCC
Q 010250          147 LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDL  226 (514)
Q Consensus       147 ~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~  226 (514)
                      .+++++|++.++ .+.++|+|++||+||++.|+++++.++..++.+++++||+++++|||++.+++++++.+.++..+.+
T Consensus        90 ~~la~~l~~~~~-~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~  168 (448)
T 3dod_A           90 TQLAETLIDISP-KKLTRVFYSDSGAEAMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGP  168 (448)
T ss_dssp             HHHHHHHHHHSC-TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEEC-------------------------
T ss_pred             HHHHHHHHHhCC-CCCCEEEEeCchHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccC
Confidence            999999999874 4568999999999999999999998876667666899999999999999999999988877777776


Q ss_pred             CCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcccc-CCCCcccCChhHHHHHHHHHHhcC
Q 010250          227 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKYD  305 (514)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~-~~~G~~~p~~~~L~~l~~l~~~~g  305 (514)
                      ..+.+.+++.|+.|+++  +...+.+.++++++||+++.+. ++++++|++||++ +++|+++|+++||++|+++|++||
T Consensus       169 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~le~~l~~~-~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~  245 (448)
T 3dod_A          169 LMFESYKAPIPYVYRSE--SGDPDECRDQCLRELAQLLEEH-HEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYD  245 (448)
T ss_dssp             ----CEEECCCCCTTSS--SCCHHHHHHHHHHHHHHHHHHH-GGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTT
T ss_pred             CCCCceEeCCCccccCC--ccchhhhhHHHHHHHHHHHHhC-CCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhC
Confidence            66677788888888876  6667788899999999998732 3579999999999 999999999999999999999999


Q ss_pred             CEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHH
Q 010250          306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSC  385 (514)
Q Consensus       306 illI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~  385 (514)
                      ++||+||||+||||+|++++++++++.||++||||++++|++|+|++++++++++.+.......+.+.+++||++||+++
T Consensus       246 ~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t~sK~l~~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~  325 (448)
T 3dod_A          246 VLMIVDEVATGFGRTGKMFACEHENVQPDLMAAGKGITGGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHSYTGNQLGC  325 (448)
T ss_dssp             CEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCTTTTCHHHH
T ss_pred             CEEEEeccccCCCcccchhhhhhcCCCCCEEEecccccCCcCceEEEEECHHHHHHhhhccccCCcccccCCCCcCHHHH
Confidence            99999999999999999889999999999999999999885699999999999998863100112356889999999999


Q ss_pred             HHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250          386 AVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH  465 (514)
Q Consensus       386 aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  465 (514)
                      ++++++|+.++++++.++++++++++++.|+++..++.+..+++.|+++++++.+......++.........+.+.|+++
T Consensus       326 aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  405 (448)
T 3dod_A          326 AVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMREL  405 (448)
T ss_dssp             HHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHC
Confidence            99999999998889999999999999999988766788889999999999999765433333333332356788999999


Q ss_pred             CcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          466 GMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       466 Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      ||++.+.++.|||+|++.+|+++|++++++|+++++++.
T Consensus       406 Gv~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~  444 (448)
T 3dod_A          406 GMLTRPLGDVIAFLPPLASTAEELSEMVAIMKQAIHEVT  444 (448)
T ss_dssp             TEECCEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CcEEeccCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            999999999999999999999999999999999987653

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=100.00  E-value=3.2e-65  Score=536.81  Aligned_cols=410  Identities=24%  Similarity=0.459  Sum_probs=344.7

Q ss_pred             cccCCccccccCCCCCCeEEEeeeCcEEEeC-CCC--EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCC
Q 010250           67 DMLAPFTAGWQSTDVHPLVIEKSEGSYVYDV-NGK--KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTT  143 (514)
Q Consensus        67 ~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~-dG~--~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~  143 (514)
                      .+|+||+.... ....|+++++++|+|+||. |||  +||||.|++|+++|||+||+|++|+.+|++++.+++ +...++
T Consensus        40 ~~~~~~~~~~~-~~~~~~~~~~~~G~~l~d~~dG~~~~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~~~~~~-~~~~~~  117 (457)
T 3tfu_A           40 HLWHPYSSIGR-EAVSPVVAVAAHGAWLTLIRDGQPIEVLDAMSSWWTAIHGHGHPALDQALTTQLRVMNHVM-FGGLTH  117 (457)
T ss_dssp             HBCCTTCCSSC-CSSCCEEEEEEEBTEEEEEETTEEEEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCSCCC-SSSEEC
T ss_pred             hcCcccccccc-cCCCCceEEeeecCEEEEccCCCeeEEEECCCcHhhhccCCCCHHHHHHHHHHHHhccCcc-ccccCC
Confidence            36788775311 1246899999999999999 999  999999999999999999999999999998865442 223467


Q ss_pred             chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCC-CccccC
Q 010250          144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSG-LPALHQ  222 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~-~~~~~~  222 (514)
                      +...+|+++|++.++ .+.++|+|+|||+||++.|+|+++.|+...+.+++++||+++++|||++.+++++++ .+.++.
T Consensus       118 ~~~~~L~e~la~~~~-~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~  196 (457)
T 3tfu_A          118 EPAARLAKLLVDITP-AGLDTVFFSDSGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHS  196 (457)
T ss_dssp             HHHHHHHHHHHHHSS-TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC-----
T ss_pred             HHHHHHHHHHHHhCC-CCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccc
Confidence            788999999999974 467899999999999999999999988777878888999999999999999998854 445555


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~  301 (514)
                      .+....+.+..++.|..           .+.++++++|++++.+. ++++++|++|| +||++|+++|+++||++|+++|
T Consensus       197 ~~~~~~~~~~~~~~p~~-----------~~~~~d~~~le~~l~~~-~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~  264 (457)
T 3tfu_A          197 LWTDVLAAQVFAPQVPR-----------DYDPAYSAAFEAQLAQH-AGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDIC  264 (457)
T ss_dssp             -----CCCCEEECCCCS-----------SCCHHHHHHHHHHHHHH-GGGEEEEEECSSEECTTTCEECCTHHHHHHHHHH
T ss_pred             cccCCCCCceEecCCCc-----------ccCHHHHHHHHHHHHhC-CCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHH
Confidence            55444444444444421           12345678899888754 35799999999 9999999999999999999999


Q ss_pred             HhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCc
Q 010250          302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH  381 (514)
Q Consensus       302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~  381 (514)
                      ++||++||+||||+||||+|++++++++++.||++||||+|+||++|+|++++++++++.+...  ..+.+.+++||++|
T Consensus       265 ~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdiit~sK~l~gG~~~lG~v~~~~~i~~~~~~~--~~~~~~~~~t~~~n  342 (457)
T 3tfu_A          265 RRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIMCVGKALTGGYLSLAATLCTADVAHTISAG--AAGALMHGPTFMAN  342 (457)
T ss_dssp             HHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHHHHHS--SSCSCCCCCTTTTC
T ss_pred             HHcCCEEEEEcCccCCccccchhHhHhcCCCceEEEEChhhhCCCcceEEEEEcHHHHHHhhcc--CCCceeEecCCCcC
Confidence            9999999999999999999999999999999999999999999978999999999999998531  12356788999999


Q ss_pred             HHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHH
Q 010250          382 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ  461 (514)
Q Consensus       382 pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  461 (514)
                      |++|++++++|+.++++++.++++++++++++.|+++.+++.+..+++.|+++++++.+..           ....+.+.
T Consensus       343 ~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~vr~~G~~~~i~l~~~~-----------~~~~~~~~  411 (457)
T 3tfu_A          343 PLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDVRVCGAIGVIECDRPV-----------DLAVATPA  411 (457)
T ss_dssp             HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGGGSTTEEEEEECSSCEEEEESSCC-----------CHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCeeeeecCCeEEEEEECCcc-----------cHHHHHHH
Confidence            9999999999999988899999999999999999988667888899999999999986531           14568899


Q ss_pred             HHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          462 CEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       462 l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      |+++||++.+.++.+||+||+++|++||++++++|+++++++.
T Consensus       412 l~~~Gv~v~~~~~~lRi~p~~~~t~eei~~~l~~L~~~l~~~~  454 (457)
T 3tfu_A          412 ALDRGVWLRPFRNLVYAMPPYICTPAEITQITSAMVEVARLVG  454 (457)
T ss_dssp             HHHTTEECCCBTTEEEECCCTTCCHHHHHHHHHHHHHHHHHC-
T ss_pred             HHHCCeEEEecCCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999999999999999999999999999987653

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=100.00  E-value=4.9e-63  Score=519.75  Aligned_cols=401  Identities=25%  Similarity=0.444  Sum_probs=339.8

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++|+|+|+||.|||+||||.+++++++|||+||+|++|+.+|++++.+++ +..++.+...+++++|++.++...
T Consensus        43 ~p~~~~~g~G~~v~d~~g~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~-~~~~~~~~~~~la~~l~~~~~~~~  121 (451)
T 3oks_A           43 MPVYAVRAGGGIVEDVDGNRLIDLGSGIAVTTVGNSAPKVVEAVRSQVGDFTHTC-FMVTPYEGYVAVCEQLNRLTPVRG  121 (451)
T ss_dssp             CSSCEEEEETTEEEETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHTTCSCCT-TTTSCCHHHHHHHHHHHHHSSCCS
T ss_pred             CCceEEEeecCEEEECCCCEEEEcCCCccccccCCCCHHHHHHHHHHHHhccccc-CCccCCHHHHHHHHHHHHhCCcCC
Confidence            7899999999999999999999999999999999999999999999998875432 223467788999999999985444


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCcc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      .++|+|+|||+||++.|+|+++.+      +++++||+++++|||++.+++++++.+ .++..+.+..+.+..+++|..|
T Consensus       122 ~~~v~~~~sGseA~~~Alk~a~~~------~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (451)
T 3oks_A          122 DKRSALFNSGSEAVENAVKIARSH------THKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPF  195 (451)
T ss_dssp             SEEEEEESSHHHHHHHHHHHHHHH------HCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHH
T ss_pred             CCEEEEeCcHHHHHHHHHHHHHHh------cCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccc
Confidence            689999999999999999999877      467899999999999999999998875 6666776666677777777655


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHh-CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~~-~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                      +.+.++.+.+.+...+++.+++.+.+. .++++++||+||+++++|+++|+++||++|+++|++||++||+||||+||||
T Consensus       196 ~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~  275 (451)
T 3oks_A          196 RDAEFGKELATDGELAAKRAITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFAR  275 (451)
T ss_dssp             HHGGGCTTTTTCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTT
T ss_pred             cccccccccchhhHHHHHHHHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCc
Confidence            543222222223334456665555532 3468999999999999999999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|++++++++++.||+++|||++++| +|+|++++++++++.+..       ..+++||++||+++++++++|+.+++++
T Consensus       276 ~g~~~~~~~~~~~pdi~t~sK~l~~G-~~iG~v~~~~~~~~~~~~-------~~~~~t~~~~~~~~aaa~aal~~~~~~~  347 (451)
T 3oks_A          276 TGAMFACEHEGIDPDLIVTAKGIAGG-LPLSAVTGRAEIMDSPHV-------SGLGGTYGGNPIACAAALATIETIESEG  347 (451)
T ss_dssp             TSSSSGGGGGTCCCSEEEECGGGGTT-SSCEEEEEEHHHHTCSCT-------TSBCCSSSSCHHHHHHHHHHHHHHHHTT
T ss_pred             cccchhhhhcCCCCCeeeehhhhhCC-cceEEEEECHHHHhhhcC-------CCcCCCCCCCHHHHHHHHHHHHHHhhhh
Confidence            99999999999999999999999998 899999999999988752       3578899999999999999999998889


Q ss_pred             HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CE
Q 010250          400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DN  475 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~  475 (514)
                      +.++++++++++++.|+++ .+++.+..+++.|+++++++.+.. ...  + .......+.+.|+++||++.+.+   +.
T Consensus       348 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~--~-~~~~~~~~~~~l~~~Gv~v~~~~~~~~~  423 (451)
T 3oks_A          348 LVARAQQIEKIMKDRLGRLQAEDDRIGDVRGRGAMIAMELVKAG-TTE--P-DADLTKALCAGAHAAGVIVLSCGTYGNV  423 (451)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEBSTT-SCC--B-CHHHHHHHHHHHHHTTEECEEECTTSCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEeeEEEEEEEecCc-cCC--C-CHHHHHHHHHHHHhCCcEEecCCCCCCE
Confidence            9999999999999999987 567888899999999999996521 111  1 11235678899999999999865   67


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      +||+||+.+|+++|++++++|+++++
T Consensus       424 iRi~~~~~~t~e~i~~~l~~l~~~l~  449 (451)
T 3oks_A          424 VRFLPPLSIGDDLLNEGLDVLEEVLR  449 (451)
T ss_dssp             EEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHh
Confidence            99999999999999999999999885

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=100.00  E-value=5.9e-63  Score=519.39  Aligned_cols=400  Identities=27%  Similarity=0.464  Sum_probs=339.3

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+|+||.|||+||||.+++++++|||+||+|++|+.++++++.+++ +..++.+...+++++|++.++...
T Consensus        46 ~p~~~~~~~G~~v~d~~G~~ylD~~~~~~~~~lGh~~p~v~~A~~~~~~~~~~~~-~~~~~~~~~~~la~~l~~~~~~~~  124 (453)
T 4ffc_A           46 APVYAVDADGGVIVDADGNSFIDLGAGIAVTTVGASHPAVAAAIADQATHFTHTC-FMVTPYEQYVQVAELLNALTPGDH  124 (453)
T ss_dssp             CSSCEEEEETTEEEETTSCEEEESSHHHHTCTTCTTCHHHHHHHHHHHHHCSCCT-TTTSCCHHHHHHHHHHHHHSSCSS
T ss_pred             CCceEEeeecCEEEeCCCCEEEEcCCCcccCcCCCCCHHHHHHHHHHHHhccccc-cCcCCCHHHHHHHHHHHHhCCCCC
Confidence            7899999999999999999999999999999999999999999999998875432 223467888999999999985434


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCcc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      .++|+|+|||+||++.|+|+++.+      +++++||+++++|||++.+++++++.+ .++..+.+..+.+..+++|..+
T Consensus       125 ~~~v~~~~sGseA~~~alk~a~~~------~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (453)
T 4ffc_A          125 DKRTALFNSGAEAVENAIKVARLA------TGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPL  198 (453)
T ss_dssp             CEEEEEESSHHHHHHHHHHHHHHH------HCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTT
T ss_pred             CcEEEEeCcHHHHHHHHHHHHHHh------cCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccc
Confidence            689999999999999999999877      467899999999999999999998875 6666676666667777777665


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL  320 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~  320 (514)
                      +.+. +.+.++....+.+.|++.+   .++++++||+||+++++|+++|+++||++|+++|++||++||+||||+||||+
T Consensus       199 ~~~~-g~~~~~~~~~~~~~l~~~i---~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~  274 (453)
T 4ffc_A          199 RDEP-GLTGEEAARRAISRIETQI---GAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFART  274 (453)
T ss_dssp             TSCT-TCCHHHHHHHHHHHHHHHT---CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT
T ss_pred             cCcc-ccchHHHHHHHHHHHHHhc---CCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcc
Confidence            5432 2222333333344555443   34689999999999999999999999999999999999999999999999999


Q ss_pred             cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250          321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI  400 (514)
Q Consensus       321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~  400 (514)
                      |.+++++++++.||++||||++++| +|+|++++++++++.+..       ..+++||++||+++++++++|+.++++++
T Consensus       275 g~~~a~~~~~~~pdi~t~sK~~~~G-~~~G~~~~~~~i~~~~~~-------~~~~~t~~~~~~~~aaa~aal~~~~~~~~  346 (453)
T 4ffc_A          275 GAWFASEHEGIVPDIVTMAKGIAGG-MPLSAVTGRAELMDAVYA-------GGLGGTYGGNPVTCAAAVAALGVMRELDL  346 (453)
T ss_dssp             SSSSTHHHHTCCCSEEEECGGGGTT-SSCEEEEEEHHHHTTSCT-------TSSCCSSSSCHHHHHHHHHHHHHHHHTTH
T ss_pred             cccchhhhcCCCcchHhhhhhhcCC-cCeEEEEECHHHHhhhcc-------cCcCCCCCcCHHHHHHHHHHHHHhhhhhH
Confidence            9988999999999999999999998 899999999999988753       35788999999999999999999988899


Q ss_pred             HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CEE
Q 010250          401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNI  476 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~i  476 (514)
                      .++++++++++++.|+++ .+++.+..+++.|+++++++.+.. ...   ........+.+.|+++||++.+.+   +.+
T Consensus       347 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~---~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~i  422 (453)
T 4ffc_A          347 PARARAIEASVTSRLSALAEEVDIIGEVRGRGAMLAIEIVKPG-TLE---PDAALTKSIAAEALSQGVLILTCGTFGNVI  422 (453)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCSSEEEEEEETTEEEEEEBCTT-SCC---BCHHHHHHHHHHHHHTTEECCEECTTSCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCeEEEEeeceEEEEEEecCc-ccC---CCHHHHHHHHHHHHhCCCEEecCCCCCCEE
Confidence            999999999999999987 567888899999999999996521 111   111235678899999999998865   679


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          477 MMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       477 Ri~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      ||+||+.+|+++|++++++|+++++++.
T Consensus       423 Ri~~~~~~t~e~i~~~l~~l~~~l~~~~  450 (453)
T 4ffc_A          423 RLLPPLVIGDDLLDEGITALSDIIRAKA  450 (453)
T ss_dssp             EECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999997653

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=100.00  E-value=1.1e-62  Score=517.21  Aligned_cols=412  Identities=33%  Similarity=0.638  Sum_probs=351.0

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++|+|+|+||.||++||||.+|+|+++|||+||+|++|+.++++++.+ +. ..++++...+++++|++.++ .+
T Consensus        31 ~p~~~~~~~G~~v~d~~g~~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~-~~-~~~~~~~~~~la~~l~~~~~-~~  107 (452)
T 3n5m_A           31 STTVGAKAEGCWVEDIQGKRYLDGMSGLWCVNSGYGRKELAEAAYKQLQTLSY-FP-MSQSHEPAIKLAEKLNEWLG-GE  107 (452)
T ss_dssp             GCCEEEEEEBTEEEETTCCEEEETTHHHHTCTTCBCCHHHHHHHHHHHTTCCC-CC-TTSEEHHHHHHHHHHHHHHT-SC
T ss_pred             CCceEEEeeeCEEEECCCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhcCC-cc-cccCCHHHHHHHHHHHHhCC-CC
Confidence            78999999999999999999999999999999999999999999999988655 22 23467788999999999974 34


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      .+ |+|++||+||++.|+++++.|+..++.+++++||+++++|||++.+++++++.+.++..+.+..+.+.+++.|+.++
T Consensus       108 ~~-v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (452)
T 3n5m_A          108 YV-IFFSNSGSEANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYR  186 (452)
T ss_dssp             EE-EEEESSHHHHHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTT
T ss_pred             ce-EEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCcccc
Confidence            45 99999999999999999998876666567889999999999999999999998887777776666677777777777


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL  320 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~  320 (514)
                      +++.. +.+.+...++++|++++.+.+++++++|++||+ +| +|+++|+++||++|+++|++||++||+||||+||||+
T Consensus       187 ~~~~~-~~~~~~~~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~  264 (452)
T 3n5m_A          187 MPGIE-RENIYDVECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRT  264 (452)
T ss_dssp             STTTT-TSCGGGCHHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT
T ss_pred             CccCC-chhhHHHHHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcc
Confidence            65432 223344456788999887555568999999999 89 9999999999999999999999999999999999999


Q ss_pred             cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250          321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI  400 (514)
Q Consensus       321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~  400 (514)
                      |++++++++++.||++||||++++|++|+|++++++++++.+.... ..+.+.+++|+++||+++++++++|+.++++++
T Consensus       265 g~~~~~~~~~~~~di~t~sK~l~~G~~~ig~~~~~~~i~~~~~~~~-~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~  343 (452)
T 3n5m_A          265 GKAFGFMNYDVKPDIITMAKGITSAYLPLSATAVKREIYEAFKGKG-EYEFFRHINTFGGNPAACALALKNLEIIENENL  343 (452)
T ss_dssp             SSSSGGGGTTCCCSEEEECGGGGTTSSCCEEEEEEHHHHGGGCSSS-TTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTH
T ss_pred             cccchhhhcCCCCCEEeecccccCCCcceEEEEECHHHHHHHhhcc-CCCCccccCCCCCCHHHHHHHHHHHHHHHhccH
Confidence            9998999999999999999999998789999999999999885310 123566889999999999999999999988889


Q ss_pred             HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC------
Q 010250          401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------  473 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g------  473 (514)
                      .++++++++++++.|+++ .+++.+..+++.|+++++++.....+..+++  ......+.+.|+++||++.+.+      
T Consensus       344 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~--~~~~~~~~~~l~~~Gv~~~~~~~~~~~~  421 (452)
T 3n5m_A          344 IERSAQMGSLLLEQLKEEIGEHPLVGDIRGKGLLVGIELVNDKETKEPID--NDKIASVVNACKEKGLIIGRNGMTTAGY  421 (452)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSSCEEEEEEEETTTTEECC--HHHHHHHHHHHHHTTEECEECTTSSTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCeEEEEEEEEEEEEEEecCCcccCCCC--HHHHHHHHHHHHHCCcEEeecCcccCCC
Confidence            999999999999999987 6778889999999999999865432222221  1124568889999999999875      


Q ss_pred             -CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          474 -DNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       474 -~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                       +.|||+||+.+|+++|++++++|++++++
T Consensus       422 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~  451 (452)
T 3n5m_A          422 NNILTLAPPLVISSEEIAFVIGTLKTAMER  451 (452)
T ss_dssp             CCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence             67999999999999999999999998753

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=100.00  E-value=8.4e-59  Score=484.53  Aligned_cols=412  Identities=31%  Similarity=0.547  Sum_probs=325.4

Q ss_pred             ccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHH
Q 010250           68 MLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSL  147 (514)
Q Consensus        68 ~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~  147 (514)
                      +|+||       ...|+++.+++|+++||.||++||||.+++++++|||+||+|++|+.++++++.+++.. .++.+...
T Consensus         4 ~~~~~-------~~~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~-~~~~~~~~   75 (430)
T 3i4j_A            4 VFYRS-------SKPYPVAVRGEGVFLYDDAGRRYLDGSSGALVANIGHGRAEVGERMAAQAARLPFVHGS-QFSSDVLE   75 (430)
T ss_dssp             BCCSS-------SSCCCEEEEEEBTEEEETTSCEEEETTHHHHTCTTCBCCHHHHHHHHHHHHHCCCCCTT-TCEEHHHH
T ss_pred             cccCC-------CCCCceEEeeecCEEEECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhccccccc-ccCCHHHH
Confidence            46676       23789999999999999999999999999999999999999999999999886654432 34667888


Q ss_pred             HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250          148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP  227 (514)
Q Consensus       148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~  227 (514)
                      +++++|++.++ .+.++|+|++||+||++.|+++++.++...+.+++++||+++++|||.+..+.++++.+.++..+...
T Consensus        76 ~l~~~la~~~~-~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~  154 (430)
T 3i4j_A           76 EYAGRLARFVG-LPTFRFWAVSGGSEATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPL  154 (430)
T ss_dssp             HHHHHHHHHTT-CTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTC------------------------
T ss_pred             HHHHHHHHhCC-CCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCc
Confidence            99999999874 45789999999999999999999988777777788999999999999999988888876666555544


Q ss_pred             CC--cccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccC-CCCcccCChhHHHHHHHHHHhc
Q 010250          228 AP--FVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIG-AGGVIPPPATYFEKVQAVVKKY  304 (514)
Q Consensus       228 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~-~~G~~~p~~~~L~~l~~l~~~~  304 (514)
                      .+  .+..++.++.|+.          ...++++|++++.+.+++++++|++||++| ++|+++++++||++|+++|++|
T Consensus       155 ~~~~~~~~~~~~~~~~~----------~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~  224 (430)
T 3i4j_A          155 MRPEAWPKLPKPDPARN----------GAEDAEGLRALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEA  224 (430)
T ss_dssp             -CGGGSCEECCCCTTSC----------HHHHHTHHHHHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHH
T ss_pred             CCCCCceEcCCCcccch----------hhHHHHHHHHHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHc
Confidence            44  4555565554442          345678899988765556899999999999 9999999999999999999999


Q ss_pred             CCEEEEechhcCcccccccceeccc-CCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHH
Q 010250          305 DILFIADEVICAFGRLGTMFGCDKY-SIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPV  383 (514)
Q Consensus       305 gillI~DEv~tG~gr~G~~~~~~~~-gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl  383 (514)
                      |++||+||||+||||+|++++++++ ++.||++||||++++|++|+|++++++++++.+....   +.+.+++||++||+
T Consensus       225 ~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~sK~l~~G~~r~G~~~~~~~i~~~~~~~~---~~~~~~~t~~~~~~  301 (430)
T 3i4j_A          225 GIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLGKGLAAGYAPLAGLLAAPQVYETVMGGS---GAFMHGFTYAGHPV  301 (430)
T ss_dssp             TCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEECGGGTTTSSCCEEEEECHHHHHHHHHTT---CBCCCCCTTTTCHH
T ss_pred             CCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEcccccCCccccEEEEECHHHHHHHhccC---CcccccCCCCCCHH
Confidence            9999999999999999998889999 9999999999999988789999999999999987531   23567889999999


Q ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH
Q 010250          384 SCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC  462 (514)
Q Consensus       384 ~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l  462 (514)
                      ++++++++|+.++++++.++++++++++++.|+++ .+++.+..+++.|+++++++.+.. ...++.. ......+.+.|
T Consensus       302 ~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~l  379 (430)
T 3i4j_A          302 SVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQVRGTGLLLGVVLGDLA-TGQAFET-PGIASRIGAAA  379 (430)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEC--------------CHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEecccc-ccCCCcc-HHHHHHHHHHH
Confidence            99999999999888889999999999999999987 467888899999999999986322 1111100 01145688999


Q ss_pred             HHCCcEEEee--------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          463 EKHGMLVRVS--------GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       463 ~~~Gv~~~~~--------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      +++||++.+.        ++.+||+|++.+|+++|++++++|+++++++
T Consensus       380 ~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~  428 (430)
T 3i4j_A          380 LKRGLITYPGSGAEPNGRGDHLLLGPPLSITAAEVDGLLALLAGALEDV  428 (430)
T ss_dssp             HHTTEECC-----------CEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             HhCCCEEEecccccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            9999999876        4679999999999999999999999998754

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=100.00  E-value=3.3e-58  Score=480.52  Aligned_cols=382  Identities=30%  Similarity=0.485  Sum_probs=303.5

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++.+++|+++||.||++||||.+|+++++|||+||+|++|+.++++++.+++.  ..+.+...+++++|++++   +
T Consensus        47 ~~~~~~~~~g~~~~d~~G~~ylD~~~g~~~~~lgh~~p~v~~ai~~~~~~~~~~~~--~~~~~~~~~l~~~la~~~---g  121 (433)
T 1z7d_A           47 IPVVLKRAKGVFVYDVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTICSR--AFFSVPLGICERYLTNLL---G  121 (433)
T ss_dssp             EEEEEEEEEBTEEEETTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTTCSCCCT--TSEEHHHHHHHHHHHHHH---T
T ss_pred             CCceEEeeecCEEEECCCCEEEEcccchhhcccCCCCHHHHHHHHHHHHhCCCccC--CcCCHHHHHHHHHHHhhc---C
Confidence            68899999999999999999999999999999999999999999999988654332  225667889999999997   3


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHh-hc-CCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNN-AL-GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY  239 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~-~~-~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  239 (514)
                      .++|+|++||+||++.|+++++.|.. .. ..+++++||+++++|||++..++++++.+.++.++.+..+.+..++.+  
T Consensus       122 ~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~--  199 (433)
T 1z7d_A          122 YDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYD--  199 (433)
T ss_dssp             CSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECTT--
T ss_pred             CCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCCC--
Confidence            68999999999999999999876531 11 234568999999999999988888777655554444332333222221  


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                                      ++++|++++.   .+++++|++||+++++|++++++++|++|+++|++||++||+||||+||||
T Consensus       200 ----------------d~~~le~~l~---~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~  260 (433)
T 1z7d_A          200 ----------------DLEALEEELK---DPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGR  260 (433)
T ss_dssp             ----------------CHHHHHHHHT---STTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTT
T ss_pred             ----------------CHHHHHHHhC---CCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCc
Confidence                            2577888774   256899999999999999999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|.+++++++++.||+++|||++++|++|+|++++++++++.+..       ..+++||++||++++++.++|+.+++++
T Consensus       261 ~g~~~~~~~~~~~~di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~-------~~~~~t~~~~~~~~aaa~aal~~~~~~~  333 (433)
T 1z7d_A          261 TGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIKP-------GEHGSTYGGNPLAASICVEALNVLINEK  333 (433)
T ss_dssp             TSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTCCT-------TCCCCTTTTCHHHHHHHHHHHHHHHHTT
T ss_pred             CCcchhhHhcCCCCCEEEECccccCCCCCeEEEEECHHHHhhhcc-------ccccccCCCCHHHHHHHHHHHHHHHhcc
Confidence            999888899999999999999999876899999999999887752       2477899999999999999999998778


Q ss_pred             HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEE
Q 010250          400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIM  477 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iR  477 (514)
                      +.++++++++++++.|+++ .+++.+..+++.|+++++++.+..  .        ....+.+.|+++||++.+. ++.||
T Consensus       334 ~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~--~--------~~~~~~~~l~~~Gv~v~~~~~~~iR  403 (433)
T 1z7d_A          334 LCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNEL--V--------NVLDICLKLKENGLITRDVHDKTIR  403 (433)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTT--C--------CHHHHHHHHHHTTEECCEETTTEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeeeEEEEEEccCh--h--------HHHHHHHHHHHCCeEEecCCCCEEE
Confidence            9999999999999999987 467777888999999999986431  0        1456888999999999986 46799


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGKALKATEER  506 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~~l~~~~~~  506 (514)
                      ++||+.+|++||++++++|+++++++.++
T Consensus       404 i~~~~~~t~e~i~~~l~~l~~~l~~~~~~  432 (433)
T 1z7d_A          404 LTPPLCITKEQLDECTEIIVKTVKFFDER  432 (433)
T ss_dssp             ECCCTTCCHHHHHHHHHHHHHHHHHHC--
T ss_pred             EECCcCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999998776543

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=100.00  E-value=4.2e-58  Score=482.01  Aligned_cols=429  Identities=32%  Similarity=0.531  Sum_probs=349.6

Q ss_pred             ccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCch
Q 010250           66 HDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKP  145 (514)
Q Consensus        66 ~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~  145 (514)
                      ...|+|++...... ..|+++.+++|+++||.||++||||.+++|++++||+||+|++|+.++++++. ++.+..++.+.
T Consensus        17 ~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~   94 (449)
T 3a8u_X           17 DAHWMPYTANRNFL-RDPRLIVAAEGSWLVDDKGRKVYDSLSGLWTCGAGHTRKEIQEAVAKQLSTLD-YSPGFQYGHPL   94 (449)
T ss_dssp             GGSCCTTSCHHHHH-HSCCCEEEEEBTEEEETTCCEEEETTHHHHTCTTCBSCHHHHHHHHHHTTTCS-CCCSSSCCCHH
T ss_pred             cccccccccccccc-CCCceEEeeecCEEEECCCCEEEECCccHhhccCCCCCHHHHHHHHHHHHhCC-CccccccCCHH
Confidence            34678877642111 25889999999999999999999999999999999999999999999998764 22222446677


Q ss_pred             HHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCC
Q 010250          146 SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD  225 (514)
Q Consensus       146 ~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~  225 (514)
                      ..+++++|+++++ .+.++|+|++||+||++.|+++++.|+...+.+++++||+++++|||.+..++.+++.+.++..++
T Consensus        95 ~~~l~~~la~~~~-~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~  173 (449)
T 3a8u_X           95 SFQLAEKITDLTP-GNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFG  173 (449)
T ss_dssp             HHHHHHHHHTTSS-TTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTC
T ss_pred             HHHHHHHHHHhCC-CCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccC
Confidence            8899999999874 467899999999999999999998877666666778999999999999988888877766666666


Q ss_pred             CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC
Q 010250          226 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD  305 (514)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g  305 (514)
                      +..+.+..+++|..|+.++.+.+.+.+...++++|++++.+..++++++|++||+++++|++.|+++|+++|+++|++||
T Consensus       174 ~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~  253 (449)
T 3a8u_X          174 QPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHN  253 (449)
T ss_dssp             CCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHT
T ss_pred             CCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhC
Confidence            55556666666655553321222233455567889988876543578999999999999999999999999999999999


Q ss_pred             CEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccC--CCCcccccCCCCCcHH
Q 010250          306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSN--TLGSFSHGFTYSGHPV  383 (514)
Q Consensus       306 illI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~--~~~~~~~~~t~~~~pl  383 (514)
                      ++||+||||+||||+|..+.++++++.||++++||++++|++|+|++++++++++.+.....  ....+.+++|+++||+
T Consensus       254 ~~li~Dev~~~~g~~g~~~~~~~~~~~~di~s~sK~l~~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~  333 (449)
T 3a8u_X          254 ILLVFDEVITGFGRTGSMFGADSFGVTPDLMCIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYSAHPV  333 (449)
T ss_dssp             CEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEECGGGGTTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTTTCHH
T ss_pred             CEEEEeccccCccccCcchhhhhcCCCCCEEEEcccccCCCCceEEEEECHHHHHHhhccCcccccccccccCCCcccHH
Confidence            99999999999999998778888999999999999999887899999999999998875211  1123356789999999


Q ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH
Q 010250          384 SCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE  463 (514)
Q Consensus       384 ~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~  463 (514)
                      +++++.++|+.++++++.++++++++++++.|+++.+++.+..+++.|+++++++.......      ......+.+.|+
T Consensus       334 ~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~------~~~~~~~~~~l~  407 (449)
T 3a8u_X          334 ACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDA------IVRPFEAGMALW  407 (449)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBS------SHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcccc------cccHHHHHHHHH
Confidence            99999999999887789999999999999999887556777778899999999986532110      001224778888


Q ss_pred             HCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          464 KHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       464 ~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ++||++.+.++.|||+||+.+|+++|++++++|+++++++
T Consensus       408 ~~Gv~v~~~g~~iRis~~~~~t~~~i~~~l~~l~~~l~~~  447 (449)
T 3a8u_X          408 KAGFYVRFGGDTLQFGPTFNSKPQDLDRLFDAVGEVLNKL  447 (449)
T ss_dssp             HHTEECEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             HCCcEEecCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence            9999999988889999999999999999999999988653

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=100.00  E-value=1e-56  Score=470.03  Aligned_cols=378  Identities=28%  Similarity=0.461  Sum_probs=318.4

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++.+++|+++||.||++||||.+|+++++|||+||+|++|+.++++++.+++..  .+.+...+++++|++++   +
T Consensus        58 ~~~~~~~~~G~~~~d~~g~~ylD~~sg~~~~~lgh~~p~v~~Ai~~~~~~~~~~~~~--~~~~~~~~l~~~la~~~---g  132 (439)
T 2oat_A           58 LPVALERGKGIYLWDVEGRKYFDFLSSYSAVNQGHCHPKIVNALKSQVDKLTLTSRA--FYNNVLGEYEEYITKLF---N  132 (439)
T ss_dssp             CSCEEEEEEBTEEEETTCCEEEESSGGGGTTTTCBTCHHHHHHHHHHHTTCSCCCTT--SEESSHHHHHHHHHHHH---T
T ss_pred             CCeeEEeeecCEEEECCCCEEEEccCCcccccCCCCCHHHHHHHHHHHHhcCcccCc--cCCHHHHHHHHHHHHhc---C
Confidence            688999999999999999999999999999999999999999999999886544322  24567899999999987   3


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHh-hcC-CCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNN-ALG-RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY  239 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~-~~~-~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  239 (514)
                      .++|+|++||+||++.|+++++.|.. ..+ .+++++||+++++|||++..++++++.+.++.++.+..+.+..++++  
T Consensus       133 ~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~~--  210 (439)
T 2oat_A          133 YHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPYN--  210 (439)
T ss_dssp             CSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECSS--
T ss_pred             CCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCCC--
Confidence            68999999999999999999976532 111 34568999999999999988888777655555554333333333221  


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                                      ++++|++++.   .+++++|++||+++++|+++++++++++|+++|++||++||+||||+||||
T Consensus       211 ----------------d~~~le~~l~---~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~  271 (439)
T 2oat_A          211 ----------------DLPALERALQ---DPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLAR  271 (439)
T ss_dssp             ----------------CHHHHHHHTT---STTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTT
T ss_pred             ----------------CHHHHHHHhC---CCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcc
Confidence                            2577887774   247899999999999999999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|++++++++++.||++++||++++|++|+|++++++++++.+..       ..+++||++||++++++.++|+.+++++
T Consensus       272 ~g~~~~~~~~~~~~Di~t~sK~l~~G~~~~G~v~~~~~~~~~l~~-------~~~~~t~~~~~~~~aaa~aal~~~~~~~  344 (439)
T 2oat_A          272 TGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIKP-------GEHGSTYGGNPLGCRVAIAALEVLEEEN  344 (439)
T ss_dssp             TSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTSCT-------TSSCCSSTTCHHHHHHHHHHHHHHHHTT
T ss_pred             CCcchhHHHhCCCCcEEEecccccCCCCCeEEEEECHHHHhccCC-------CCcccCCCcCHHHHHHHHHHHHHHhhhh
Confidence            999888899999999999999999886899999999999887752       2577899999999999999999998888


Q ss_pred             HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEEE
Q 010250          400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMM  478 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iRi  478 (514)
                      +.++++++++++++.|+++ .++.+..+++.|+++++++.+... .        ....+.+.|+++||++.+. ++.|||
T Consensus       345 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~g~~~~v~l~~~~~-~--------~~~~l~~~l~~~Gv~v~~~~~~~iRi  414 (439)
T 2oat_A          345 LAENADKLGIILRNELMKL-PSDVVTAVRGKGLLNAIVIKETKD-W--------DAWKVCLRLRDNGLLAKPTHGDIIRF  414 (439)
T ss_dssp             HHHHHHHHHHHHHHHHTTS-CTTTEEEEEEETTEEEEEECCCSS-C--------CHHHHHHHHHHTTEECCBSSSSEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeeeEEEEEEecCcc-H--------HHHHHHHHHHHCCeEEecCCCCEEEE
Confidence            9999999999999999987 567777889999999999864310 0        1456888999999999986 467999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +||+.+|++||++++++|++++++
T Consensus       415 ~~~~~~t~e~i~~~l~~l~~~l~~  438 (439)
T 2oat_A          415 APPLVIKEDELRESIEIINKTILS  438 (439)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             ECccCCCHHHHHHHHHHHHHHHHh
Confidence            999999999999999999998753

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=100.00  E-value=4.5e-56  Score=464.48  Aligned_cols=393  Identities=23%  Similarity=0.333  Sum_probs=314.2

Q ss_pred             CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250           81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS  160 (514)
Q Consensus        81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~  160 (514)
                      ..|+++++++|+++||.|||+||||.+++|+++|||+||+|++|+.+++++...    ++.+.+...+|+++|++.++  
T Consensus        36 ~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~----~~~~~~~~~~l~~~la~~~~--  109 (434)
T 3l44_A           36 GAPIAMERGKGAYFWDVDGNKYIDYLAAYGPIITGHAHPHITKAITTAAENGVL----YGTPTALEVKFAKMLKEAMP--  109 (434)
T ss_dssp             SCCCCEEEEEBTEEEETTCCEEEECCGGGTTCSSCBTCHHHHHHHHHHHHHCSC----CSSCCHHHHHHHHHHHHHCT--
T ss_pred             CCCceEEEeecCEEEECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCcC----CCCCCHHHHHHHHHHHHhCC--
Confidence            478999999999999999999999999999999999999999999999987532    13467788999999999975  


Q ss_pred             CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcc
Q 010250          161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      +.++|+|++||+||++.|+++++.+      +++++||+++++|||++..++..++.+....... ..+.+.....+...
T Consensus       110 ~~~~v~~~~sGsea~~~ai~~a~~~------~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~  182 (434)
T 3l44_A          110 ALDKVRFVNSGTEAVMTTIRVARAY------TGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTP-DSAGVPQSIAQEVI  182 (434)
T ss_dssp             TCSEEEEESSHHHHHHHHHHHHHHH------HCCCEEEEETTCCCCSSGGGGBC-------CCCB-SSTTCCHHHHTTEE
T ss_pred             CCCEEEEeCchHHHHHHHHHHHHHh------hCCCEEEEEcCccCCCcHHHHhhcCCcccccCCC-CcCCCCCcCCCceE
Confidence            5789999999999999999999876      4678999999999999988887776543211110 00000000000000


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL  320 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~  320 (514)
                      ..+          ++++++|++++.+. ++++++|++||+++++|+++|+++||++|+++|++||++||+||||+|| |+
T Consensus       183 ~~~----------~~d~~~le~~l~~~-~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~  250 (434)
T 3l44_A          183 TVP----------FNNVETLKEALDKW-GHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RF  250 (434)
T ss_dssp             EEC----------TTCHHHHHHHHHHH-GGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TS
T ss_pred             ecC----------cccHHHHHHHHHhC-CCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-ec
Confidence            111          11357888888654 2579999999999999999999999999999999999999999999999 99


Q ss_pred             cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250          321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI  400 (514)
Q Consensus       321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~  400 (514)
                      |..++++++++.||++||||++++| +|+|++++++++++.+...    +.+.+++||++||+++++++++|+.++++++
T Consensus       251 g~~~~~~~~~~~~di~t~sK~~~~G-~~iG~~~~~~~i~~~~~~~----~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~  325 (434)
T 3l44_A          251 MYGGAQDLLGVTPDLTALGKVIGGG-LPIGAYGGKKEIMEQVAPL----GPAYQAGTMAGNPASMASGIACLEVLQQEGL  325 (434)
T ss_dssp             SSSCHHHHHTCCCSEEEEEGGGGTT-SSCEEEEECHHHHTTBTTT----SSBCCCCTTTTCHHHHHHHHHHHHHHTSTTH
T ss_pred             cccHHHHHcCCCCCeeehhhhhcCC-cCeeeEEEcHHHHHhhccC----CCcccCCCCCcCHHHHHHHHHHHHHHHcccH
Confidence            9988899999999999999999987 8999999999999888632    2356788999999999999999999988889


Q ss_pred             HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCC--CCCccchHHHHHHHHHHCCcEEEeeC-CEE
Q 010250          401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEP--FPPEWGIGAYFGAQCEKHGMLVRVSG-DNI  476 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~i  476 (514)
                      .++++++++++++.|+++ ..++.+..+++.|+++++++.+.......  ..........+.+.|+++||++++.+ ..+
T Consensus       326 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~  405 (434)
T 3l44_A          326 YEKLDELGATLEKGILEQAAKHNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSKYEAW  405 (434)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSSTTCCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCEEEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecCCCcE
Confidence            999999999999999987 45677778999999999998643211000  00011124568889999999999876 458


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          477 MMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       477 Ri~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      |++  +.+|++||++++++|+++++++.+
T Consensus       406 rl~--~~~t~e~i~~~l~~l~~~l~~~~~  432 (434)
T 3l44_A          406 FLT--TEHTKEDIEYTIEAVGRAFAALAD  432 (434)
T ss_dssp             ECC--TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEe--cccCHHHHHHHHHHHHHHHHHHHh
Confidence            885  899999999999999999987643

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=100.00  E-value=8.8e-56  Score=461.65  Aligned_cols=411  Identities=22%  Similarity=0.331  Sum_probs=311.5

Q ss_pred             cccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccc
Q 010250           58 STTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS  137 (514)
Q Consensus        58 ~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~  137 (514)
                      +..+++.+...++|++. +......|+++++++|+++||.|||+||||.+++++++|||+||+|++|+.++++++..+  
T Consensus        12 ~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~--   88 (429)
T 4e77_A           12 AQAQQLIPGGVNSPVRA-FTGVGGIPLFIERADGAYLFDVDGKAYIDYVGSWGPMILGHNHPAIRQAVIEAVERGLSF--   88 (429)
T ss_dssp             HHHHHHSGGGCSSGGGG-TTTTCSCCCCEEEEEBTEEEETTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCC--
T ss_pred             HHHHhhcCCCcCccccc-ccccCCCCceEEEeecCEEEECCCCEEEECCCchhccccCCCCHHHHHHHHHHHHhCccc--
Confidence            33444544444444332 222234789999999999999999999999999999999999999999999999875422  


Q ss_pred             ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC
Q 010250          138 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL  217 (514)
Q Consensus       138 ~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~  217 (514)
                        +.+.+...+++++|++.++  +.++++|+|||+||++.|+++++.+      +++.+||+++++|||.+...+..++.
T Consensus        89 --~~~~~~~~~la~~l~~~~~--~~~~v~~~~sGsea~~~al~~a~~~------~~~~~ii~~~~~yhg~~~~~~~~~~~  158 (429)
T 4e77_A           89 --GAPTEMEVKMAQLVTDLVP--TMDMVRMVNSGTEATMSAIRLARGY------TGRDKIIKFEGCYHGHADCLLVKAGS  158 (429)
T ss_dssp             --SSCCHHHHHHHHHHHHHST--TCSEEEEESSHHHHHHHHHHHHHHH------HCCCEEEEETTCCCC-----------
T ss_pred             --CCCCHHHHHHHHHHHhhCC--CCCEEEEeCcHHHHHHHHHHHHHHh------hCCCEEEEEcCccCCCChhhhhhcCC
Confidence              3467888999999999975  5789999999999999999999876      45789999999999998866655443


Q ss_pred             ccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHH
Q 010250          218 PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKV  297 (514)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l  297 (514)
                      ....... +..+.+.....+...+.+          ++++++|++++.+. ++++++|++||+++++|++.++++||++|
T Consensus       159 ~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~d~~~le~~l~~~-~~~~~~vi~ep~~~~~g~~~~~~~~l~~l  226 (429)
T 4e77_A          159 GALTLGQ-PNSPGVPTDFAKHTLTCT----------YNDLASVRQAFEQY-PQEVACIIVEPVAGNMNCIPPLPEFLPGL  226 (429)
T ss_dssp             --------CCCTTSCGGGGTTEEEEC----------TTCHHHHHHHHHHS-TTTEEEEEECSSBCTTSCBCCCTTHHHHH
T ss_pred             cccccCC-CCcCCCCCccCCceeecC----------CCCHHHHHHHHHhc-CCCEEEEEECCccCCCCCcCCCHHHHHHH
Confidence            2211100 000111000000111111          11367888888653 35799999999999999999999999999


Q ss_pred             HHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCC
Q 010250          298 QAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT  377 (514)
Q Consensus       298 ~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t  377 (514)
                      +++|++||++||+||||+|| |+|..++.+++++.||+++|||++++| +|+|++++++++++.+...    +...+++|
T Consensus       227 ~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~~pdi~t~sK~~~~G-~~~G~~~~~~~~~~~l~~~----~~~~~~~t  300 (429)
T 4e77_A          227 RALCDEFGALLIIDEVMTGF-RVALAGAQDYYHVIPDLTCLGKIIGGG-MPVGAFGGRREVMNALAPT----GPVYQAGT  300 (429)
T ss_dssp             HHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTCCCSEEEEEGGGGTT-SCCEEEEECHHHHTTBTTT----SSBCC--C
T ss_pred             HHHHHHcCCEEEEeccccCc-ccCcchHHHhcCCCCCeeeecccccCC-CCeEEEEECHHHHHHhccC----CCccccCC
Confidence            99999999999999999999 999988899999999999999999987 8999999999999888642    23457889


Q ss_pred             CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCC----CCcc
Q 010250          378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPF----PPEW  452 (514)
Q Consensus       378 ~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~----~~~~  452 (514)
                      |++||++++++.++|+.++++++.++++++++++++.|+++ ..++.+..+++.|+++++++.+.... .++    ..+.
T Consensus       301 ~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~  379 (429)
T 4e77_A          301 LSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPLVVNHVGGMFGLFFTNADTV-TCYQDVMNCDV  379 (429)
T ss_dssp             CCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEECCSSSCC-CSHHHHHTSCH
T ss_pred             CCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeEEEEEEccCccc-ccccccccccH
Confidence            99999999999999999987889999999999999999886 45677778999999999998754210 000    0011


Q ss_pred             chHHHHHHHHHHCCcEEEeeCC-EEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          453 GIGAYFGAQCEKHGMLVRVSGD-NIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       453 ~~~~~~~~~l~~~Gv~~~~~g~-~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      .....+.+.|+++||++.+.+. .+|+  ++.+|++||++++++|++++++
T Consensus       380 ~~~~~~~~~l~~~Gi~v~~~~~~~~~~--~~~~t~e~i~~~l~~l~~~l~~  428 (429)
T 4e77_A          380 ERFKRFFHLMLEEGVYLAPSAFEAGFM--SLAHSNEDIQKTVNAARRCFAK  428 (429)
T ss_dssp             HHHHHHHHHHHHTTEECCSSTTSCEEC--CTTCCHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHCCeEEeecCCCCEEE--eccCCHHHHHHHHHHHHHHHHh
Confidence            1246788899999999998763 4554  5899999999999999998753

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=100.00  E-value=2.6e-55  Score=452.80  Aligned_cols=374  Identities=31%  Similarity=0.513  Sum_probs=321.2

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++.+++|+++||.||++||||.+++++++|||+||+|++|+.++++++.+++.  ..+.+...+++++|++.++   
T Consensus        18 ~~~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~la~~~~---   92 (395)
T 3nx3_A           18 FDIVLEKGQGVYLFDDKAKKYLDFSSGIGVCALGYNHAKFNAKIKAQVDKLLHTSN--LYYNENIAAAAKNLAKASA---   92 (395)
T ss_dssp             CSCBEEEEEBTEEEETTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHTTCSCCCT--TSBCHHHHHHHHHHHHHHT---
T ss_pred             CCceEEeeeeeEEEECCCCEEEECCCcHHhccCCCCCHHHHHHHHHHHHhcccccc--ccCCHHHHHHHHHHHHhcC---
Confidence            78899999999999999999999999999999999999999999999987654432  2356788999999999873   


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      .++++|++||+||++.|+++++.+....+ +++++||+++++|||.+..+.++++.+.++..+.+....+..++.+    
T Consensus        93 ~~~v~~~~gg~ea~~~al~~~~~~~~~~g-~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  167 (395)
T 3nx3_A           93 LERVFFTNSGTESIEGAMKTARKYAFNKG-VKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYN----  167 (395)
T ss_dssp             CSEEEEESSHHHHHHHHHHHHHHHHHHTT-CTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTT----
T ss_pred             CCeEEEeCCHHHHHHHHHHHHHHHhhccC-CCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCC----
Confidence            57999999999999999999987765554 4578999999999999999988888766655444333333333221    


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                                    ++++|++++.    +++++|++||+++++|.++|+++++++|+++|++||++||+||||+||||+|
T Consensus       168 --------------d~~~l~~~l~----~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g  229 (395)
T 3nx3_A          168 --------------DISSVEKLVN----EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSG  229 (395)
T ss_dssp             --------------CHHHHHTTCC----TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS
T ss_pred             --------------CHHHHHHhcc----CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCC
Confidence                          1466766653    5789999999999999999999999999999999999999999999999999


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHH-HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEV-SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI  400 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i-~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~  400 (514)
                      ..++.+++++.||++++||++++| +|+|++++++++ ++.+.+       ..+++|+++||++++++.++|+.++++++
T Consensus       230 ~~~~~~~~~~~~d~~t~sK~~~~G-~~~G~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~aa~aal~~~~~~~~  301 (395)
T 3nx3_A          230 KFFAYEHAQILPDIMTSAKALGCG-LSVGAFVINQKVASNSLEA-------GDHGSTYGGNPLVCAGVNAVFEIFKEEKI  301 (395)
T ss_dssp             SSSGGGGGTCCCSEEEECGGGTTT-SCCEEEEECHHHHHHHSCT-------TCCSSCBSCCHHHHHHHHHHHHHHHHTTH
T ss_pred             cchhHHhcCCCCCEEEecccccCC-CceEEEEEchhhhhhhcCC-------cccCCCCCCCHHHHHHHHHHHHHHHhhHH
Confidence            988889999999999999999987 799999999998 887752       35778999999999999999998887889


Q ss_pred             HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEE
Q 010250          401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMM  478 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi  478 (514)
                      .++++++++++++.|+++ ..++.+..+++.|+++++++.+..           ....+.+.|+++|+++.+.+ +.|||
T Consensus       302 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~~~~~l~~~Gi~v~~~~~~~iRi  370 (395)
T 3nx3_A          302 LENVNKLTPYLEQSLDELINEFDFCKKRKGLGFMQGLSLDKSV-----------KVAKVIQKCQENALLLISCGENDLRF  370 (395)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTS-----------CHHHHHHHHHHTTEECEEETTTEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCeEEEEeEEEEEEEEeCCcc-----------hHHHHHHHHHHCCCEEecCCCCEEEE
Confidence            999999999999999886 456788889999999999986531           14568889999999999874 67999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +|++.+|++|+++++++|++++++
T Consensus       371 ~~~~~~t~e~i~~~l~~l~~~l~~  394 (395)
T 3nx3_A          371 LPPLILQKEHIDEMSEKLRKALKS  394 (395)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             ECCCCCCHHHHHHHHHHHHHHHHh
Confidence            999999999999999999998753

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=100.00  E-value=3.5e-60  Score=495.65  Aligned_cols=412  Identities=20%  Similarity=0.258  Sum_probs=327.7

Q ss_pred             ccccccccccccccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHH
Q 010250           43 LARFYGTDASSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLV  122 (514)
Q Consensus        43 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~  122 (514)
                      ..|+......+++..+..+++.+..+..|++..    ..+|+++++++|+|+||+|||+||||++++++++|||+||+|+
T Consensus        47 ~~~~~~~~~~s~~l~~~~~~~~~~g~~~~~~~~----~~~p~~~~~~~G~~l~D~dG~~yiD~~~~~~~~~lGh~~p~V~  122 (465)
T 2yky_A           47 RNTFARDNPVSAGHHERARRSMPGGNTRSILFH----RPFPLVIAQGTGSRFQDVDGHAYVNFLGEYTAGLFGHSHPVIR  122 (465)
Confidence            344543344455556666677666554454331    1369999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEec
Q 010250          123 AAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQK  202 (514)
Q Consensus       123 ~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~  202 (514)
                      +|+.+|++++..    +..+++...+|+++|+++++  +.++|+|+|||+||++.|+|+++.+      +++++||++++
T Consensus       123 ~Av~~q~~~~~~----~~~~~~~~~~Lae~L~~~~p--~~~~v~~~nSGseA~~~Aik~ar~~------tgr~~ii~~~~  190 (465)
T 2yky_A          123 AAVERALAVGLN----LSTQTENEALFAEAVCDRFP--SIDLVRFTNSGTEANLMALATATAI------TGRKTVLAFDG  190 (465)
Confidence            999999987422    13366788999999999974  5689999999999999999999866      57889999999


Q ss_pred             CCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccC
Q 010250          203 SYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIG  282 (514)
Q Consensus       203 ~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~  282 (514)
                      +|||++..++  ++ +. ..  +.+. .  ..                .+.++++++|++++.+. ++++++|++||+++
T Consensus       191 ~yHG~~~~~~--sg-~~-~~--g~~~-~--~~----------------~~~~~d~~~l~~~l~~~-~~~~aavi~epv~~  244 (465)
T 2yky_A          191 GYHGGLLNFA--SG-HA-PT--NAPY-H--VV----------------LGVYNDVEGTADLLKRH-GHDCAAILVEPMLG  244 (465)
Confidence            9999998777  33 11 10  1100 0  00                11224567888887643 35799999999999


Q ss_pred             CCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHh
Q 010250          283 AGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVI  362 (514)
Q Consensus       283 ~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l  362 (514)
                      ++|+++|+++||++|+++|++||++||+||||+ | |+|++++++++|+.||++||||++++| +|+|++++++++++.+
T Consensus       245 ~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~-r~g~~~a~~~~gv~pDi~t~sK~lg~G-~piG~v~~~~~i~~~l  321 (465)
T 2yky_A          245 AGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-S-RLSGGGAQEMLGISADLTTLGKYIGGG-MSFGAFGGRRDLMERF  321 (465)
Confidence            999999999999999999999999999999999 6 999988999999999999999999998 8999999999999988


Q ss_pred             hhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccC
Q 010250          363 HSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADN  441 (514)
Q Consensus       363 ~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~  441 (514)
                      .+.  ..+.+.+++||++||++|++++++|+.++++++.+++++++++++++|+++ .+++++..+++.|+|++++|.+.
T Consensus       322 ~~~--~~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~  399 (465)
T 2yky_A          322 DPA--RDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRA  399 (465)
Confidence            641  012345788999999999999999999988889999999999999999987 45677788999999999998742


Q ss_pred             CCCC--CCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          442 KSPN--EPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       442 ~~~~--~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      ....  .....+......+.+.|+++||++.+.+...   ||+.+|++||++++++|+++++++.
T Consensus       400 ~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p~~~~~---~s~~~t~edid~~l~~l~~~l~~~~  461 (465)
T 2yky_A          400 PIRSAGDVRAADQQLKELFFFHMLRKGIYLAPRGMYA---LSLEIADAGRDAFAEALADFIGEQR  461 (465)
Confidence            1100  0000011124568889999999998765322   7799999999999999999987764

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=100.00  E-value=1.9e-56  Score=471.84  Aligned_cols=393  Identities=21%  Similarity=0.354  Sum_probs=302.5

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccc-ccccc--CCchHHHHHHHHHHhcC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYH-SFWNR--TTKPSLDLAKELLEMFT  158 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~-~~~~~--~~~~~~ela~~L~~~~~  158 (514)
                      +|.++.+++|+|+||.|||+||||++|+++++|||+||+|++|+.+|+....+.+ +.++.  ..+...+++++|+++++
T Consensus        45 ~~~~~~~~~G~~l~d~dG~~ylD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~l~~~~~  124 (472)
T 1ohv_A           45 FFCNYEESRGNYLVDVDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAP  124 (472)
T ss_dssp             CCBCGGGCBBTEEEBTTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGCC
T ss_pred             CCceEEEEEcCEEEeCCCCEEEECCCCHhhcccCCCCHHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHhCC
Confidence            5667899999999999999999999999999999999999999999875421111 11111  23344455555665553


Q ss_pred             cCCCCeEEEeCChhHHHHHHHHHHHHHHhh--cC----------------CCC--ccEEEEEecCCcccceeeeecCCCc
Q 010250          159 ASKMAKVFFTNSGSEANDTQVKLVWYYNNA--LG----------------RPN--KKKFIARQKSYHGSTLIAASLSGLP  218 (514)
Q Consensus       159 ~~~~~~v~~~~sGseA~~~Alk~a~~~~~~--~~----------------~~~--~~~ii~~~~~yHG~t~~~~~~s~~~  218 (514)
                       .+.++|+|+|||+|||+.|+|+++.|++.  ++                .++  |++||+++++|||++.+++++++.+
T Consensus       125 -~~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~  203 (472)
T 1ohv_A          125 -KGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSK  203 (472)
T ss_dssp             -TTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSC
T ss_pred             -CCcCEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCc
Confidence             36789999999999999999999877531  11                134  5899999999999999999888865


Q ss_pred             cccCCCCCCCCcccccCCCCcccCCCCCCC-h-hHHHHHHHHHHHHHHHHhCC--CcEEEEEEccccCCCCcccCChhHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGET-E-EEYSTRLANNLEDLILKEGP--ETIAAFIAEPVIGAGGVIPPPATYF  294 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~le~li~~~~~--~~~aavivEpv~~~~G~~~p~~~~L  294 (514)
                      .++.. +.+...+.++++|. ++++..... . +.+...++++|++++....+  .++++|++||+++++|+++|+++||
T Consensus       204 ~~~~~-~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l  281 (472)
T 1ohv_A          204 AIHKI-DIPSFDWPIAPFPR-LKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFF  281 (472)
T ss_dssp             HHHHT-TSCCCCCCEECCCC-CCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHH
T ss_pred             ccccc-CCCCCCCcccCCCc-ccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHH
Confidence            43221 11212222333432 222111000 0 11223467888888875321  2799999999999999999999999


Q ss_pred             HHHHHHHHhcCCEEEEechhcCcccccccceecccCCC--Cchhchhhh-hcCCcccceeEEeCHHHHHHhhhccCCCCc
Q 010250          295 EKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK--PDLVSFAKA-LSSAYMPIGAILVSPEVSEVIHSQSNTLGS  371 (514)
Q Consensus       295 ~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~--pDiv~~sK~-l~gG~~pig~v~~~~~i~~~l~~~~~~~~~  371 (514)
                      ++|+++|++||++||+||||+||||+|.+++++++|+.  ||++||||+ |+|| ++    + ++++. .+       ..
T Consensus       282 ~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~sK~~l~GG-~~----~-~~~~~-~~-------~~  347 (472)
T 1ohv_A          282 RKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTGG-FF----H-KEEFR-PN-------AP  347 (472)
T ss_dssp             HHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEECGGGSSEE-EE----E-CGGGS-CS-------SS
T ss_pred             HHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEccccccCC-cc----C-chhhc-cc-------cc
Confidence            99999999999999999999999999988889999987  999999999 6765 33    2 55542 11       24


Q ss_pred             ccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCCCC
Q 010250          372 FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFP  449 (514)
Q Consensus       372 ~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~  449 (514)
                      +.+++|+++||+++++++++|+.++++++.+++++++++|+++|+++ .+++ .+..+++.|+|+++++.+.        
T Consensus       348 ~~~~~T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g~~~~~~~~~~--------  419 (472)
T 1ohv_A          348 YRIFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTPDE--------  419 (472)
T ss_dssp             SSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTEEEEECSSH--------
T ss_pred             ccccCccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCceEEEEEeCCh--------
Confidence            46788999999999999999999988889999999999999999987 3566 4778899999999977531        


Q ss_pred             CccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          450 PEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       450 ~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                         .....+...|+++||++.+.+ +.|||+|++.+|++||++++++|++++++
T Consensus       420 ---~~~~~~~~~l~~~Gv~~~~~g~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~  470 (472)
T 1ohv_A          420 ---SIRNKLISIARNKGVMLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSDILAD  470 (472)
T ss_dssp             ---HHHHHHHHHHHHTTEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             ---hHHHHHHHHHHHCCeEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence               124568889999999999875 68999999999999999999999998864

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=100.00  E-value=3.6e-55  Score=458.29  Aligned_cols=395  Identities=23%  Similarity=0.404  Sum_probs=322.0

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++++++|+++||.||++||||.++.++++|||+||+|++|+.++++++.+++ +..++.+...+++++|++.++ .+
T Consensus        25 ~~~~~~~~~G~~v~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~~~l~~~la~~~~-~~  102 (439)
T 3dxv_A           25 FPLAISGGRGARLIEENGRELIDLSGAWGAASLGYGHPAIVAAVSAAAANPAGAT-ILSASNAPAVTLAERLLASFP-GE  102 (439)
T ss_dssp             SCCEEEEEEBTEEEETTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHSCSCSC-SSSSEEHHHHHHHHHHHHTTT-CT
T ss_pred             CCceEEEeeeCEEEeCCCCEEEECCCchhhccCCCCCHHHHHHHHHHHHhccCcc-ccccCCHHHHHHHHHHHHhCC-CC
Confidence            7889999999999999999999999999999999999999999999998865432 234567788999999999874 34


Q ss_pred             C-CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcc--ccCCCCCCCCcccccCCCC
Q 010250          162 M-AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPA--LHQKFDLPAPFVLHTDCPH  238 (514)
Q Consensus       162 ~-~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~--~~~~~~~~~~~~~~~~~~~  238 (514)
                      . ++++|++||+||++.|+++++.+      .++++||+++++|||.+..++.+++.+.  ++..+.+..+.+..+++++
T Consensus       103 ~~~~v~~~~ggsea~~~al~~~~~~------~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (439)
T 3dxv_A          103 GTHKIWFGHSGSDANEAAYRAIVKA------TGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRP  176 (439)
T ss_dssp             TTEEEEEESSHHHHHHHHHHHHHHH------HSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSC
T ss_pred             CCCEEEEeCCHHHHHHHHHHHHHHH------hCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCc
Confidence            5 79999999999999999998765      3567899999999999998888887655  5544443333333344433


Q ss_pred             cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc
Q 010250          239 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG  318 (514)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g  318 (514)
                      .+..    ...    ..++++|++++.+..++++++|++||+++++|.+.|+++|+++|+++|++||++||+||+|+|||
T Consensus       177 ~~~~----~~~----~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g  248 (439)
T 3dxv_A          177 YRND----PTG----DAILTLLTEKLAAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLA  248 (439)
T ss_dssp             BTTB----TTS----HHHHHHHHHHHHTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTT
T ss_pred             cccc----ccH----HHHHHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence            2111    111    11578888888544456899999999999999999999999999999999999999999999999


Q ss_pred             cccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc
Q 010250          319 RLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER  398 (514)
Q Consensus       319 r~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~  398 (514)
                      |+|..++.+++++.||+++|||++++| +|+|++++++++++.+..       ..+++|+ ++|+++++++++|+.++++
T Consensus       249 ~~g~~~~~~~~~~~~di~s~sK~~~~G-~riG~~~~~~~~~~~~~~-------~~~~~t~-~~~~~~~aa~aal~~~~~~  319 (439)
T 3dxv_A          249 RSGRLHCFEHEGFVPDILVLGKGLGGG-LPLSAVIAPAEILDCASA-------FAMQTLH-GNPISAAAGLAVLETIDRD  319 (439)
T ss_dssp             TTSSSSGGGGTTCCCSEEEECGGGGTT-SCCEEEEEEHHHHTSCSS-------SSCCTTT-TCHHHHHHHHHHHHHHHHT
T ss_pred             cCchhhHHHhcCCCCCEEEEcchhcCC-cceEEEEECHHHHhhhcC-------CCcCCCc-ccHHHHHHHHHHHHHHHhc
Confidence            999988889999999999999999987 699999999999887763       2567899 9999999999999998888


Q ss_pred             cHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---C
Q 010250          399 NIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---D  474 (514)
Q Consensus       399 ~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~  474 (514)
                      ++.++++++++++++.|+++ ..++.+..+++.|+++++++........+   .......+.+.|+++|+++.+.+   +
T Consensus       320 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~Gv~v~~~~~~~~  396 (439)
T 3dxv_A          320 DLPAMAERKGRLLRDGLSELAKRHPLIGDIRGRGLACGMELVCDRQSREP---ARAETAKLIYRAYQLGLVVYYVGMNGN  396 (439)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEE---CHHHHHHHHHHHHHHTEECEEESTTSC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCC---CHHHHHHHHHHHHHCCcEEeecCCCCC
Confidence            89999999999999999987 45788888999999999988643221111   11135668889999999999876   6


Q ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          475 NIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       475 ~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      .+||+|++.+|+++|++++++|+++++++.
T Consensus       397 ~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~  426 (439)
T 3dxv_A          397 VLEFTPPLTITETDIHKALDLLDRAFSELS  426 (439)
T ss_dssp             EEEECCCTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            799999999999999999999999998764

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=100.00  E-value=1.9e-55  Score=459.17  Aligned_cols=412  Identities=23%  Similarity=0.327  Sum_probs=322.1

Q ss_pred             cccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccc
Q 010250           58 STTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS  137 (514)
Q Consensus        58 ~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~  137 (514)
                      +..+++.+....++++. +......|+++++++|+++||.|||+||||.+++|+++|||+||+|++|+.++++++...  
T Consensus        12 ~~~~~~~~~g~~~~~~~-~~~~~~~p~~~~~~~G~~~~d~~g~~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~~~~~~--   88 (429)
T 3k28_A           12 EEAQDLMPGGVNSPVRA-FKSVGMNPLFMERGKGSKVYDIDGNEYIDYVLSWGPLIHGHANDRVVEALKAVAERGTSF--   88 (429)
T ss_dssp             HHHTTTSGGGSSSGGGG-CGGGTCCCCCEEEEEBTEEEETTCCEEEESCGGGTTCTTCBSCHHHHHHHHHHHHHCSCC--
T ss_pred             HHHHhhcCCCcCccccc-ccccCCCCceEEEeecCEEEECCCCEEEECCCChhhcccCCCCHHHHHHHHHHHhhCcCc--
Confidence            33445555544333332 111134789999999999999999999999999999999999999999999999875431  


Q ss_pred             ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC
Q 010250          138 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL  217 (514)
Q Consensus       138 ~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~  217 (514)
                        +.+++...+|+++|++.++  +.++++|++||+||++.|+++++.+      +++++||+++++|||++..++..++.
T Consensus        89 --~~~~~~~~~l~~~la~~~~--~~~~v~~~~~Gsea~~~ai~~a~~~------~~~~~vi~~~~~yhg~~~~~~~~~g~  158 (429)
T 3k28_A           89 --GAPTEIENKLAKLVIERVP--SIEIVRMVNSGTEATMSALRLARGY------TGRNKILKFIGCYHGHGDSLLIKAGS  158 (429)
T ss_dssp             --SSCCHHHHHHHHHHHHHST--TCSEEEEESSHHHHHHHHHHHHHHH------HTCCEEEEEETCCCCSCGGGCSSCCT
T ss_pred             --CCCCHHHHHHHHHHHHhCC--CCCEEEEeCChHHHHHHHHHHHHHh------hCCCEEEEECCCcCCCcHHHHHhcCC
Confidence              3467788999999999974  5789999999999999999999876      46789999999999999888877765


Q ss_pred             ccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHH
Q 010250          218 PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKV  297 (514)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l  297 (514)
                      +....... ..+.+.....+....          +.++++++|++++.+. ++++++|++||+++++|++.|+++||++|
T Consensus       159 ~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~d~~~le~~l~~~-~~~~~~vi~ep~~~~~G~~~~~~~~l~~l  226 (429)
T 3k28_A          159 GVATLGLP-DSPGVPEGVAKNTIT----------VAYNDLESVKYAFEQF-GDDIACVIVEPVAGNMGVVPPQPGFLEGL  226 (429)
T ss_dssp             TC-----C-CCTTCCHHHHTTEEE----------EETTCHHHHHHHHHHH-GGGEEEEEECSSBCTTSCBCCCTTHHHHH
T ss_pred             cccccCCC-CcCCCCCcccCceee----------cCCCCHHHHHHHHHhC-CCCEEEEEEcCCCCCCCcccCCHHHHHHH
Confidence            33211110 001000000000000          0011367888887653 35799999999999999999999999999


Q ss_pred             HHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCC
Q 010250          298 QAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT  377 (514)
Q Consensus       298 ~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t  377 (514)
                      +++|++||++||+||||+|| |+|.+++++++++.||++||||++++| +|+|++++++++++.+...    +...+++|
T Consensus       227 ~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~~~di~t~sK~~~~G-~~iG~~~~~~~~~~~~~~~----~~~~~~~t  300 (429)
T 3k28_A          227 REVTEQNGALLIFDEVMTGF-RVAYNCGQGYYGVTPDLTCLGKVIGGG-LPVGAYGGKAEIMRQVAPS----GPIYQAGT  300 (429)
T ss_dssp             HHHHHHHTCEEEEECTTTTT-TSSTTHHHHHHTCCCSEEEECGGGGTT-SCCEEEEECHHHHTTBTTT----SSBCCCCT
T ss_pred             HHHHHHcCCEEEEecccccc-ccCcchHHHHhCCCCceehhhhhhcCC-CCeEEEEEcHHHHhhhccC----CCccccCC
Confidence            99999999999999999999 999888889999999999999999887 8999999999999888632    23457889


Q ss_pred             CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCC--CCCccch
Q 010250          378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEP--FPPEWGI  454 (514)
Q Consensus       378 ~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~--~~~~~~~  454 (514)
                      |++||+++++++++|+.++ +++.++++++++++++.|+++ ..++.+..+++.|+++++++.+.......  ...+...
T Consensus       301 ~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~  379 (429)
T 3k28_A          301 LSGNPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLRKAAEKHGIPHHINRAGSMIGIFFTDEPVINYDAAKSSNLQF  379 (429)
T ss_dssp             TTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHH
T ss_pred             CCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEEEeeccEEEEEEecCCcccccccccccHHH
Confidence            9999999999999999776 678999999999999999987 45677888999999999998653211000  0011123


Q ss_pred             HHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          455 GAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       455 ~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ...+.+.|+++||++.+.+ +.+|++  +.+|++++++++++|+++++++
T Consensus       380 ~~~~~~~l~~~Gv~v~~~~~~~~r~~--~~~t~e~i~~~l~~l~~~l~~~  427 (429)
T 3k28_A          380 FAAYYREMVEQGVFLPPSQFEGLFLS--TVHSDADIEATIAAAEIAMSKL  427 (429)
T ss_dssp             HHHHHHHHHHTTEECCSSTTSCBCCC--TTCCHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHCCeEEecCCCCCEEEE--CCCCHHHHHHHHHHHHHHHHHH
Confidence            4678889999999999865 458875  8999999999999999998654

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=100.00  E-value=2e-54  Score=451.83  Aligned_cols=402  Identities=26%  Similarity=0.475  Sum_probs=326.9

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++.+++|+++||.||++||||.++.++.+|||+||+|++|+.++++++.+.+  .+++.+...+++++|+++++ .+
T Consensus        25 ~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~l~~~la~~~~-~~  101 (433)
T 1zod_A           25 EPMIIERAKGSFVYDADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLF--SEMLSRPVVDLATRLANITP-PG  101 (433)
T ss_dssp             CSSCCCEEEBTEEECTTCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCC--TTCCCHHHHHHHHHHHHHSC-TT
T ss_pred             CCceEEEeecCEEEeCCCCEEEEcccchhccccCCCCHHHHHHHHHHHHhCcccc--cccCCHHHHHHHHHHHHhCC-CC
Confidence            5788999999999999999999999999999999999999999999998764322  24456778899999999874 35


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      .++|+|++||+||++.|+++++.+      +++++||+++++|||.+..++++++.+ +...+......+..++.|..++
T Consensus       102 ~~~v~~~~gg~ea~~~a~~~~~~~------~~~~~vi~~~~~yhg~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~  174 (433)
T 1zod_A          102 LDRALLLSTGAESNEAAIRMAKLV------TGKYEIVGFAQSWHGMTGAAASATYSA-GRKGVGPAAVGSFAIPAPFTYR  174 (433)
T ss_dssp             CCEEEEESCHHHHHHHHHHHHHHH------HTCCEEEEETTCCCCSSHHHHHTCCSS-CCSSSCCCCTTEEEECCCCTTS
T ss_pred             cCEEEEeCchHHHHHHHHHHHHHh------hCCCeEEEECCCcCCCChhHHhhcCCc-cccccCCCCCCceEecCCcccc
Confidence            689999999999999999988755      346789999999999998888776654 2333433334455566655444


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                      .++.. +.+.+...++++|++++.+..++++++|++||+++++|+++|+++|+++|+++|++||++||+||||+||||+|
T Consensus       175 ~~~~~-~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g  253 (433)
T 1zod_A          175 PRFER-NGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTG  253 (433)
T ss_dssp             CCCEE-TTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS
T ss_pred             cccCC-chhhhHHHHHHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCc
Confidence            33211 11122344578898888765445789999999999999999999999999999999999999999999999999


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~  401 (514)
                      ..++++++++.||++++||++++| +|+|++++++++++.+...     .+.+++|+++||++++++.++|+.++++++.
T Consensus       254 ~~~~~~~~~~~~di~s~sK~~~~G-~~ig~~~~~~~~~~~~~~~-----~~~~~~t~~~~~~~~~a~~aal~~~~~~~~~  327 (433)
T 1zod_A          254 TMFACQRDGVTPDILTLSKTLGAG-LPLAAIVTSAAIEERAHEL-----GYLFYTTHVSDPLPAAVGLRVLDVVQRDGLV  327 (433)
T ss_dssp             SSSTHHHHTCCCSEEEECHHHHTT-SSCEEEEECHHHHHHHHHT-----TCCCCCTTTTCHHHHHHHHHHHHHHHHTTHH
T ss_pred             hHhHHhhcCCCCCEEEecccccCC-CCeeEEEEhHHHHHhhccC-----CCCCCCCCCcCHHHHHHHHHHHHHHHhCCHH
Confidence            877888889999999999999987 8999999999999988742     2345689999999999999999998888899


Q ss_pred             HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-----CE
Q 010250          402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DN  475 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-----~~  475 (514)
                      ++++++++++++.|+++ ..++.+..+++.|+++++++.+......+   .......+.+.|+++||++.+++     +.
T Consensus       328 ~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~---~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~  404 (433)
T 1zod_A          328 ARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEP---ADGLGAKITRECMNLGLSMNIVQLPGMGGV  404 (433)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEE---CTTHHHHHHHHHHHTTEECCEECCTTSCCE
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCC---ChHHHHHHHHHHHHCCCeEeccCCCCCCCE
Confidence            99999999999999887 34677778899999999988642211000   01125568889999999998864     77


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      |||+|++.+|+++|++++++|+++++++
T Consensus       405 lRi~~~~~~t~~~i~~~l~~l~~~l~~~  432 (433)
T 1zod_A          405 FRIAPPLTVSEDEIDLGLSLLGQAIERA  432 (433)
T ss_dssp             EEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCcCCCHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999988654

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=100.00  E-value=1.1e-54  Score=452.92  Aligned_cols=391  Identities=20%  Similarity=0.328  Sum_probs=315.5

Q ss_pred             CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250           81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS  160 (514)
Q Consensus        81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~  160 (514)
                      ..|+++++++|+++||.||++||||.+++|+++|||+||+|++|+.++++++.++    ..+.+...+++++|++.++  
T Consensus        33 ~~p~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~----~~~~~~~~~la~~l~~~~~--  106 (427)
T 3fq8_A           33 GQPIVFDRVKDAYAWDVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSF----GAPCALENVLAEMVNDAVP--  106 (427)
T ss_dssp             SCCCCEEEEEBTEEEETTSCEEEESSGGGTTCTTCBTCHHHHHHHHHHHTTCSCC----SSCCHHHHHHHHHHHHHST--
T ss_pred             CCCceEEEeeeCEEEECCCCEEEECCCchhhhccCCCCHHHHHHHHHHHHhCCCc----CCCCHHHHHHHHHHHHhCC--
Confidence            4789999999999999999999999999999999999999999999999876432    2367788999999999975  


Q ss_pred             CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcc
Q 010250          161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      +.++++|++||+||++.|+|+++.+      +++++||+++++|||++..+...++.+.....+. ..+.+.....++..
T Consensus       107 ~~~~v~~~~ggsea~~~al~~a~~~------~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  179 (427)
T 3fq8_A          107 SIEMVRFVNSGTEACMAVLRIMRAY------TGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLP-SSPGVPKKTTANTL  179 (427)
T ss_dssp             TCSEEEEESSHHHHHHHHHHHHHHH------HCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCC-SCSSSCHHHHTTEE
T ss_pred             CCCEEEEeCCHHHHHHHHHHHHHHh------hCCCEEEEECCCcCCCCHHHHHhcCCcccccCCC-CCCCCCCcccCcee
Confidence            5789999999999999999999877      4567999999999999888777766543211110 01111000000000


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL  320 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~  320 (514)
                      ..          .++++++|++++.+. ++++++|++||+++++|++.++++||++|+++|++||++||+||||+|| |+
T Consensus       180 ~~----------~~~d~~~le~~l~~~-~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~  247 (427)
T 3fq8_A          180 TT----------PYNDLEAVKALFAEN-PGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RI  247 (427)
T ss_dssp             EE----------ETTCHHHHHHHHHHS-TTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TT
T ss_pred             ec----------CCCCHHHHHHHHHhC-CCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-cc
Confidence            00          011367888888653 3579999999999999999999999999999999999999999999999 99


Q ss_pred             cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250          321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI  400 (514)
Q Consensus       321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~  400 (514)
                      |..++.+++++.||++++||++++| +|+|++++++++++.+...    +.+.+++|+++||++++++.++|+.++++++
T Consensus       248 g~~~~~~~~~~~~di~t~sK~~~~G-~~~G~~~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~  322 (427)
T 3fq8_A          248 AYGGVQEKFGVTPDLTTLGKIIGGG-LPVGAYGGKREIMQLVAPA----GPMYQAGTLSGNPLAMTAGIKTLELLRQPGT  322 (427)
T ss_dssp             BTTHHHHHTTCCCSEEEECGGGGTT-SSCEEEEECHHHHTTBTTT----SSBCCCCTTTTCHHHHHHHHHHHHHHTSTTH
T ss_pred             CcchhhHhcCCCCChhhhhhhhhCC-cceEEEEEcHHHHHhhccC----CCccccCCCCcCHHHHHHHHHHHHHHHhcCH
Confidence            9888889999999999999999987 8999999999999988642    2446788999999999999999999988889


Q ss_pred             HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCC-C-CCCccchHHHHHHHHHHCCcEEEeeCCEEE
Q 010250          401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNE-P-FPPEWGIGAYFGAQCEKHGMLVRVSGDNIM  477 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iR  477 (514)
                      .++++++++++++.|+++ ...+....+++.|+++++++.+...... . ...+......+.+.|+++||++.+.+. .|
T Consensus       323 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v~~~~~-~r  401 (427)
T 3fq8_A          323 YEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQF-EA  401 (427)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT-SC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHCCcEEecCCC-CC
Confidence            999999999999999887 4556667789999999999865321100 0 001112345688899999999988764 26


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +.+++.+|++||++++++|++++++
T Consensus       402 ~~~~~~~t~e~i~~~l~~l~~~l~~  426 (427)
T 3fq8_A          402 GFTSLAHTEEDIDATLAAARTVMSA  426 (427)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             EEeeCcCCHHHHHHHHHHHHHHHHh
Confidence            6677999999999999999998864

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=100.00  E-value=1.8e-54  Score=450.61  Aligned_cols=378  Identities=29%  Similarity=0.516  Sum_probs=316.2

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++.+++|+++||.||++||||.+++|++++||+||+|++|+.++++++.+++.  ..+.+...+++++|++++   +
T Consensus        39 ~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~ai~~~~~~~~~~~~--~~~~~~~~~l~~~la~~~---g  113 (420)
T 2pb2_A           39 ADFIPVKGKGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVEALKSQGETLWHTSN--VFTNEPALRLGRKLIDAT---F  113 (420)
T ss_dssp             CCSCEEEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCCCCCT--TSCCHHHHHHHHHHHHHS---S
T ss_pred             CCceEEeeecCEEEECCCCEEEEccccccccccCCCCHHHHHHHHHHHHhcccccC--ccCCHHHHHHHHHHHhhC---C
Confidence            78899999999999999999999999999999999999999999999987654332  235677899999999987   3


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      .++|+|++||+||++.|+++++.|+...+.+++++||+++++|||.+..++..++.+.++.++.+..+.+..++.+    
T Consensus       114 ~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~----  189 (420)
T 2pb2_A          114 AERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPFN----  189 (420)
T ss_dssp             CSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECTT----
T ss_pred             CCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecCC----
Confidence            5799999999999999999998766555556667999999999999988877777655444444333333333221    


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                                    ++++|++++.    +++++|++||+++++|+++++++++++|+++|++||++||+||+|+||||+|
T Consensus       190 --------------d~~~le~~i~----~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g  251 (420)
T 2pb2_A          190 --------------DLHAVKAVMD----DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTG  251 (420)
T ss_dssp             --------------CHHHHHHHCC----TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS
T ss_pred             --------------CHHHHHHHhc----cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCC
Confidence                          1567777664    4789999999999999888999999999999999999999999999999999


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~  401 (514)
                      +.++++.+++.||+++|||++++| +|+|++++++++++.+..       ..++.||++||++++++.++|+.++++++.
T Consensus       252 ~~~~~~~~~~~~diit~sK~l~~G-~~iG~~~~~~~l~~~l~~-------~~~~~t~~~~~~~~aa~~a~L~~~~~~~~~  323 (420)
T 2pb2_A          252 DLFAYMHYGVTPDILTSAKALGGG-FPVSAMLTTQEIASAFHV-------GSHGSTYGGNPLACAVAGAAFDIINTPEVL  323 (420)
T ss_dssp             SSSHHHHHTCCCSEEEECGGGGTT-SCCEEEEECHHHHTTCC-----------CCEECCCHHHHHHHHHHHHHHSSHHHH
T ss_pred             cHHHHHhcCCCCCeEEecccccCC-CceEEEEEhHHHHHhhcC-------CCcCcccCcCHHHHHHHHHHHHHHHhccHH
Confidence            887778889999999999999987 799999999998877652       246788999999999999999998877889


Q ss_pred             HHHHHHHHHHHhhhhhcc-CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEe
Q 010250          402 EQVNKIAPKFQDGVKAFS-DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS  479 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~-~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~  479 (514)
                      ++++++++++++.|+++. +++.+..+++.|+++++++......         ....+.+.|+++||++.+.+ +.|||+
T Consensus       324 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---------~~~~l~~~l~~~Gi~v~~~~~~~iRl~  394 (420)
T 2pb2_A          324 QGIHTKRQQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKPKYKG---------RARDFLYAGAEAGVMVLNAGADVMRFA  394 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECGGGTT---------CHHHHHHHHHHTTEECEESSTTEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCeEEEEecceEEEEEECCCchH---------HHHHHHHHHHHCCCEEEeCCCCEEEEE
Confidence            999999999999998863 4567777889999999998642100         14568889999999999874 679999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ||+.+|++|+++++++|+++++++
T Consensus       395 ~~~~~t~eei~~~~~~l~~~l~~~  418 (420)
T 2pb2_A          395 PSLVVEEADIHEGMQRFAQAVGKV  418 (420)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999998754

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=100.00  E-value=1.7e-54  Score=454.55  Aligned_cols=393  Identities=21%  Similarity=0.338  Sum_probs=316.8

Q ss_pred             eEEEeeeCcEEEe-CCCCEEEEccCCcccccCCCCCHHHH-H-HHHH---HHhcCCccccccccCCchHHHHHHHHHHhc
Q 010250           84 LVIEKSEGSYVYD-VNGKKYLDSLAGLWCTALGGSEPRLV-A-AATA---QLNTLPFYHSFWNRTTKPSLDLAKELLEMF  157 (514)
Q Consensus        84 ~~~~~~~G~~~~d-~dG~~ylD~~s~~~~~~lGh~~p~v~-~-A~~~---~l~~~~~~~~~~~~~~~~~~ela~~L~~~~  157 (514)
                      +.+.+++|+++|| .||++||||.+++|+++|||+||+|+ + |+.+   +++++.+++.  ..+++...+++++|++++
T Consensus        37 ~~~~~~~g~~~~d~~~g~~ylD~~~~~~~~~lG~~~p~v~~~~A~~~~~~~~~~~~~~~~--~~~~~~~~~la~~la~~~  114 (449)
T 2cjg_A           37 LDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNS--DVYSVAMARFVETFARVL  114 (449)
T ss_dssp             BCTTTCBBTEEEBTTTCCEEEESSHHHHTCSSCBSCHHHHTCHHHHHHHHHHHTCCCCTT--TCCCHHHHHHHHHHHHHH
T ss_pred             EEEeeeeeCEEEECCCCcEEEEccCCccccCCCCCCHHHHHHHHHHHHHHHHHhcCCCCc--ccCCHHHHHHHHHHHHhc
Confidence            3346999999999 99999999999999999999999999 9 9999   8887654332  236677899999999998


Q ss_pred             CcCCCCeEEEeCChhHHHHHHHHHHHHHHhhc----C--CCCccEEEEEecCCcccceeeeecCCC-ccccCCCCCCCCc
Q 010250          158 TASKMAKVFFTNSGSEANDTQVKLVWYYNNAL----G--RPNKKKFIARQKSYHGSTLIAASLSGL-PALHQKFDLPAPF  230 (514)
Q Consensus       158 ~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~----~--~~~~~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~~~~~  230 (514)
                      +..+.++|+|++||+||++.|+++++.|...+    +  .+++++||+++++|||++..++++++. +.++.++.+..+.
T Consensus       115 ~~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~  194 (449)
T 2cjg_A          115 GDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWP  194 (449)
T ss_dssp             CCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCC
T ss_pred             CCCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCC
Confidence            53467899999999999999999998765311    1  123679999999999999998888876 4444445433333


Q ss_pred             ccccCCCCcccCCCCCCChhH---HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCE
Q 010250          231 VLHTDCPHYWRYAHPGETEEE---YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDIL  307 (514)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gil  307 (514)
                      +..++.++.      +.....   ....++++|++++.+. .+++++|++||+++++|+++++++||++|+++|++||++
T Consensus       195 ~~~~~~~d~------~~~~~~~~~~~~~~~~~le~~i~~~-~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~l  267 (449)
T 2cjg_A          195 RIDAPYMRP------GLDEPAMAALEAEALRQARAAFETR-PHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDAL  267 (449)
T ss_dssp             EECCCCCCT------TCCHHHHHHHHHHHHHHHHHHHHHS-TTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCE
T ss_pred             cEEEcCCCc------hhhccccchhhHHHHHHHHHHHHhc-CCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcE
Confidence            333333320      011001   1234567788888643 357899999999999999999999999999999999999


Q ss_pred             EEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHH
Q 010250          308 FIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV  387 (514)
Q Consensus       308 lI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aa  387 (514)
                      ||+||||+||||+|.+++++++++.||++++||++     |+|++++++++++.+.+.  ......+++|+++||+++++
T Consensus       268 li~DEv~~g~g~~g~~~~~~~~~~~~di~t~sK~l-----~iG~~~~~~~~~~~l~~~--~~~~~~~~~t~~~n~~~~~a  340 (449)
T 2cjg_A          268 LIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKT-----QVCGVMAGRRVDEVADNV--FAVPSRLNSTWGGNLTDMVR  340 (449)
T ss_dssp             EEEECTTTTTTTTSSSSTHHHHTCCCSEEEECGGG-----SSEEEEECGGGGGSTTCT--TTSTTSSCCSSSSCHHHHHH
T ss_pred             EEEeccccCCCccCcceeecccCCCceEEEecCcc-----cEEEEEECHHHhhhhhhc--ccCCcccccCCCCCHHHHHH
Confidence            99999999999999988888899999999999998     899999999988764320  00123577899999999999


Q ss_pred             HHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCc-eeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250          388 AIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPI-IGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH  465 (514)
Q Consensus       388 a~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~-~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  465 (514)
                      +.++|+.++++++.++++++++++++.|+++ .+++. +..+++.|+++.+++.+..           ....+.+.|+++
T Consensus       341 a~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~~~~~l~~~  409 (449)
T 2cjg_A          341 ARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSLPTTA-----------DRDELIRQLWQR  409 (449)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEEEEETTEEEEECSSHH-----------HHHHHHHHHHHT
T ss_pred             HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeEeeccEEEEEEECChH-----------HHHHHHHHHHHC
Confidence            9999999887889999999999999999987 34665 7788999999999875311           245688899999


Q ss_pred             CcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          466 GMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       466 Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ||++.+.+ +.|||+|++.+|+++|++++++|+++++++
T Consensus       410 Gv~v~~~g~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~  448 (449)
T 2cjg_A          410 AVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSALPVV  448 (449)
T ss_dssp             TEECEEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CeEEecCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            99999876 679999999999999999999999998653

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=100.00  E-value=3.4e-52  Score=434.46  Aligned_cols=408  Identities=27%  Similarity=0.483  Sum_probs=321.8

Q ss_pred             ccCCccccccCCCCCCeE-EEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchH
Q 010250           68 MLAPFTAGWQSTDVHPLV-IEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPS  146 (514)
Q Consensus        68 ~~~p~~~~~~~~~~~p~~-~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~  146 (514)
                      .|+|++...   .+.|++ +.+++|+++||.||++|||+.++.|++++||++|+|++|+.+++++...++ +.+.+.+..
T Consensus        13 ~~~~~~~~~---~~~~~~~~~~~~g~~~~d~~g~~ylD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~-~~~~~~~~~   88 (429)
T 1s0a_A           13 ILHPFTSMT---SPLPVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVM-FGGITHAPA   88 (429)
T ss_dssp             BCCTTCCSS---SCCCCEEEEEEEBTEEEETTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCC-CSSEECHHH
T ss_pred             hcccccccc---ccCCceeEEeeeeeEEEeCCCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhccccc-ccccCCHHH
Confidence            456655432   125655 999999999999999999999999999999999999999999998754321 112345667


Q ss_pred             HHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcc-ccCCCC
Q 010250          147 LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPA-LHQKFD  225 (514)
Q Consensus       147 ~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~-~~~~~~  225 (514)
                      .+++++|+++++ .+.++|+|++||+||++.|+++++.+...++.+ +++||+++++|||++..++.+++... ++..+.
T Consensus        89 ~~l~~~la~~~~-~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~-~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~  166 (429)
T 1s0a_A           89 IELCRKLVAMTP-QPLECVFLADSGSVAVEVAMKMALQYWQAKGEA-RQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWK  166 (429)
T ss_dssp             HHHHHHHHHHSC-TTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCC-CCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGT
T ss_pred             HHHHHHHHHhCC-CCCCEEEEeCCHHHHHHHHHHHHHHHhcccCCC-CCeEEEECCCCCCCchhhhhhcCCchhhccccc
Confidence            899999999974 367899999999999999999887664333333 56899999999999887777665432 233333


Q ss_pred             CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccc-cCCCCcccCChhHHHHHHHHHHhc
Q 010250          226 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPV-IGAGGVIPPPATYFEKVQAVVKKY  304 (514)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv-~~~~G~~~p~~~~L~~l~~l~~~~  304 (514)
                      ...+.+..+++|.....       +.+.+.++++|++++.+. ++++++|++||+ ++++|.++|+++++++|+++|++|
T Consensus       167 ~~~~~~~~~~~~~~~~~-------~~~~~~d~~~l~~~l~~~-~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~  238 (429)
T 1s0a_A          167 GYLPENLFAPAPQSRMD-------GEWDERDMVGFARLMAAH-RHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDRE  238 (429)
T ss_dssp             TTSCCCEEECCCCSBC--------CCCCGGGGHHHHHHHHHH-TTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHH
T ss_pred             CCCCCceEeCCCccccc-------ccchHHHHHHHHHHHHhC-CCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHc
Confidence            22233334444321000       011223467888887643 247899999999 999999999999999999999999


Q ss_pred             CCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHH
Q 010250          305 DILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS  384 (514)
Q Consensus       305 gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~  384 (514)
                      |++||+||+|+|||++|..++++++++.||++++||+|+||++|+|++++++++++.+....  .+.+.+++|+++|+++
T Consensus       239 ~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~t~sK~l~~G~~~iG~~~~~~~~~~~l~~~~--~~~~~~~~t~~~n~~~  316 (429)
T 1s0a_A          239 GILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGE--AGCFMHGPTFMGNPLA  316 (429)
T ss_dssp             TCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTSSSCCEEEEECHHHHHHHHTST--TSSCSCCCTTTTCHHH
T ss_pred             CCEEEEeehhhCCcccchHHHhhhcCCCCCEEEecccccCCCccceEEEeCHHHHHHhhcCC--CcccccCCCCCCCHHH
Confidence            99999999999999999877788889999999999999987689999999999998886421  1123366799999999


Q ss_pred             HHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH
Q 010250          385 CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK  464 (514)
Q Consensus       385 ~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~  464 (514)
                      ++++.++|+.++++++.++++++++++++.|+++...+.+..+++.|+++++++....           ....+...|++
T Consensus       317 ~~a~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~l~~~l~~  385 (429)
T 1s0a_A          317 CAAANASLAILESGDWQQQVADIEVQLREQLAPARDAEMVADVRVLGAIGVVETTHPV-----------NMAALQKFFVE  385 (429)
T ss_dssp             HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGGCTTEEEEEEETTEEEEEESSCB-----------CHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEeeEEEEEEECCcc-----------cHHHHHHHHHH
Confidence            9999999999887788999999999999999887445666678889999999885421           13457788999


Q ss_pred             CCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          465 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       465 ~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +||++.+.++.|||+|++.+|++|+++++++|++++++
T Consensus       386 ~Gi~v~~~~~~iRis~~~~~t~e~i~~~~~~l~~~~~~  423 (429)
T 1s0a_A          386 QGVWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQD  423 (429)
T ss_dssp             TTEECCCBTTEEEECCCTTCCHHHHHHHHHHHHHHTSS
T ss_pred             CCCEEeccCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            99999988889999999999999999999999988754

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=100.00  E-value=1.6e-52  Score=437.56  Aligned_cols=405  Identities=22%  Similarity=0.347  Sum_probs=312.7

Q ss_pred             cccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccc
Q 010250           58 STTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS  137 (514)
Q Consensus        58 ~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~  137 (514)
                      +..+++.+..+.++.+..|.   ++|+++.+++|+++||.||++||||.++++++++||+||+|++|+.++++++..+  
T Consensus        17 ~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~G~~~~d~~g~~~lD~~~~~~~~~lG~~~~~v~~a~~~~~~~~~~~--   91 (434)
T 2epj_A           17 ERTKELFPGGVNSPVRAAVK---PYPFYVKRGEGAYLYTVDGARIVDLVLAYGPLILGHKHPRVLEAVEEALARGWLY--   91 (434)
T ss_dssp             HHHTTTSGGGSSSGGGGGCS---SSCCCEEEEEBTEEEETTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCC--
T ss_pred             HHHHhhcCCCcCcccccccC---CCCeeEEeeecCEEEECCCCEEEEcccchhcccCCCCCHHHHHHHHHHHHhCCCC--
Confidence            33445555443333332221   3689999999999999999999999999999999999999999999999874321  


Q ss_pred             ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCC
Q 010250          138 FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGL  217 (514)
Q Consensus       138 ~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~  217 (514)
                        +.+.+...+++++|+++++  +.++|+|++||+||++.|+++|+.+      .++++||+++++|||.+..+++.++.
T Consensus        92 --~~~~~~~~~l~~~la~~~~--~~~~v~~~~sgseA~~~al~~ar~~------~~~~~vi~~~~~yhg~~~~~~~~~~~  161 (434)
T 2epj_A           92 --GAPGEAEVLLAEKILGYVK--RGGMIRFVNSGTEATMTAIRLARGY------TGRDLILKFDGCYHGSHDAVLVAAGS  161 (434)
T ss_dssp             --SSCCHHHHHHHHHHHHHHC--TTCEEEEESSHHHHHHHHHHHHHHH------HCCCEEEEEETCCCCSSGGGSEECC-
T ss_pred             --CCCCHHHHHHHHHHHHhCC--CCCEEEEeCCHHHHHHHHHHHHHHh------hCCCeEEEEcCCcCCCCHHHHHhcCC
Confidence              3466778899999999874  5789999999999999999998766      34678999999999998777665543


Q ss_pred             ccccCC----CCCCC---CcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCC
Q 010250          218 PALHQK----FDLPA---PFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPP  290 (514)
Q Consensus       218 ~~~~~~----~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~  290 (514)
                      ......    .+.+.   ..+..++.                  +++++|++++.+.. +++++|++||+++++|.+.|+
T Consensus       162 ~~~~~~~p~~~g~~~~~~~~~~~~~~------------------~d~~~le~~l~~~~-~~~~~vi~ep~~~~~G~~~~~  222 (434)
T 2epj_A          162 AAAHYGVPTSAGVPEAVARLTLVTPY------------------NDVEALERVFAEYG-DRIAGVIVEPVIANAGVIPPR  222 (434)
T ss_dssp             -----CEESSTTCCHHHHTTEEEEET------------------TCHHHHHHHHHHHG-GGEEEEEECSSBCSSSCBCCC
T ss_pred             CccccCCCCCCCCCCcccCceEecCC------------------CCHHHHHHHHHhCC-CCEEEEEEeCCcCCCCccCCC
Confidence            211100    01000   00111110                  12578888886532 479999999999999999999


Q ss_pred             hhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCC
Q 010250          291 ATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG  370 (514)
Q Consensus       291 ~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~  370 (514)
                      ++|+++|+++|++||++||+||||+|| |+|..++++++++.||+++|||++++| +|+|++++++++++.+...    +
T Consensus       223 ~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~~~di~s~sK~l~~G-~~~G~v~~~~~~~~~l~~~----~  296 (434)
T 2epj_A          223 REFLAALQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNIEGDIIVLGKIIGGG-FPVGAVAGSREVMSLLTPQ----G  296 (434)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTCCCSEEEEEGGGGTT-SSCEEEEECHHHHTTBTTT----S
T ss_pred             HHHHHHHHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCCCCCeeeecchhcCC-cceeeeeecHHHHHhhccC----C
Confidence            999999999999999999999999999 888878888899999999999999997 8999999999998887631    2


Q ss_pred             cccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCC--C
Q 010250          371 SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNE--P  447 (514)
Q Consensus       371 ~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~--~  447 (514)
                      ...+++||++||++++++.++|+.++++++.++++++++++++.|+++ .++++...+++.|+++++++.+......  .
T Consensus       297 ~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~  376 (434)
T 2epj_A          297 KVFNAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQA  376 (434)
T ss_dssp             SBCCCCTTTTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHH
T ss_pred             CcccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhc
Confidence            234678999999999999999999988889999999999999999886 3345556788999999999864210000  0


Q ss_pred             CCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          448 FPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       448 ~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ..........+.+.|+++||++.+++.. |+.+++.+|++|+++++++|+++++++
T Consensus       377 ~~~~~~~~~~~~~~l~~~Gv~v~~~~~~-~~~~~~~~t~e~i~~~l~~l~~~l~~~  431 (434)
T 2epj_A          377 RKADKKFYVKLHEEMLRRGVFIAPSNLE-AVFTGLPHQGEALEIAVEGLRSSLKTV  431 (434)
T ss_dssp             TTSCHHHHHHHHHHHHHTTEECCSSTTS-CEECCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred             cccCHHHHHHHHHHHHHCCeEEeccCCC-cEEEeccCCHHHHHHHHHHHHHHHHHH
Confidence            0000112456888999999999886532 445668999999999999999998765

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=100.00  E-value=1.6e-51  Score=428.83  Aligned_cols=386  Identities=23%  Similarity=0.352  Sum_probs=301.7

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++.+++|+++||.||++||||.+++|++++||+||+|++|+.++++++..+    +++.+...+++++|+++++  +
T Consensus        34 ~p~~~~~~~g~~~~d~~g~~~iD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~----~~~~~~~~~l~~~l~~~~~--~  107 (424)
T 2e7u_A           34 TPPFLVRGEGAYVWDADGNRYLDYVMSWGPLILGHAHPKVLARVRETLERGLTF----GAPSPLEVALAKKVKRAYP--F  107 (424)
T ss_dssp             CCCCEEEEEBTEEEETTCCEEEESSGGGTTCTTCBTCHHHHHHHHHHHHTCSCC----SSCCHHHHHHHHHHHHHCT--T
T ss_pred             CCeeEEeeecCEEEeCCCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCCC----CCCCHHHHHHHHHHHHhCC--C
Confidence            689999999999999999999999999999999999999999999999874321    3466778999999999974  5


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC-CCcccccCCCCcc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP-APFVLHTDCPHYW  240 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~-~~~~~~~~~~~~~  240 (514)
                      .++|+|++||+||++.|+++|+.+      +++++||+++++|||.+..++..++.....  +..+ ...+.....+..+
T Consensus       108 ~~~v~~~~~g~ea~~~al~~ar~~------~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~--~~~p~~~g~~~~~~~~~~  179 (424)
T 2e7u_A          108 VDLVRFVNSGTEATMSALRLARGY------TGRPYIVKFRGNYHGHADGLLVEAGSGALT--LGVPSSAGVPEEYAKLTL  179 (424)
T ss_dssp             CCEEEEESSHHHHHHHHHHHHHHH------HCCCEEEEETTCCCCCCGGGSEECCSSSCC--BCEESSTTCCHHHHTTEE
T ss_pred             CCEEEEeCCHHHHHHHHHHHHHHh------hCCCEEEEECCCcCCCcHHHHHhcCCcccc--cCCCCCCCCCCccCCceE
Confidence            789999999999999999998766      346789999999999987766554432110  0000 0000000000000


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL  320 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~  320 (514)
                      ..++          +++++|++++.+. ++++++|++||+++++|.+.|+++|+++|+++ ++||++||+||+|+|| |+
T Consensus       180 ~~~~----------~d~~~le~~l~~~-~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~  246 (424)
T 2e7u_A          180 VLEY----------NDPEGLREVLKRR-GEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RL  246 (424)
T ss_dssp             EECT----------TCHHHHHHHHHHH-GGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TS
T ss_pred             eCCC----------CCHHHHHHHHHhC-CCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-cc
Confidence            1110          1257888887643 24789999999999999999999999999999 9999999999999999 88


Q ss_pred             cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-cc
Q 010250          321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RN  399 (514)
Q Consensus       321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~  399 (514)
                      |..++.+++++.||+++|||++++| +|+|++++++++++.+...    +...+++||++||++++++.++|+.+++ ++
T Consensus       247 g~~~~~~~~~~~~di~s~sK~l~~G-~~~G~~~~~~~~~~~~~~~----~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~  321 (424)
T 2e7u_A          247 AFGGATELLGLKPDLVTLGKILGGG-LPAAAYAGRREIMEKVAPL----GPVYQAGTLSGNPLAMAAGLATLELLEENPG  321 (424)
T ss_dssp             STTHHHHHHTCCCSEEEECGGGGTT-SSCEEEEECHHHHTTBTTT----SSBCCCCTTCSCHHHHHHHHHHHHHHHHCTH
T ss_pred             chhHHHHHhCCCcchhhhhhhhhCC-cceEEEEEcHHHHhhhccc----CCcccCCCCCCCHHHHHHHHHHHHHHHhccH
Confidence            8878888899999999999999987 8999999999999887631    2235778999999999999999999887 78


Q ss_pred             HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCC--CCCCccchHHHHHHHHHHCCcEEEeeCCEE
Q 010250          400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNE--PFPPEWGIGAYFGAQCEKHGMLVRVSGDNI  476 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~i  476 (514)
                      +.++++++++++++.|+++ .+++++..+++.|+++++++.+......  ...........+.+.|+++||++.+++.. 
T Consensus       322 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~-  400 (424)
T 2e7u_A          322 YYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSNFE-  400 (424)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSSSS-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccCCC-
Confidence            9999999999999999887 3456666788999999999864210000  00001112456888999999999876532 


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          477 MMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       477 Ri~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      |+.+++.+|+++|++++++|++++
T Consensus       401 ~~~~~~~~t~~~i~~~l~~l~~~l  424 (424)
T 2e7u_A          401 AAFLSVAHREEDVEKTLEALRKAL  424 (424)
T ss_dssp             CEECCTTCCHHHHHHHHHHHHHHC
T ss_pred             ceEeeccCCHHHHHHHHHHHHHhC
Confidence            344569999999999999998763

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=100.00  E-value=1e-50  Score=422.22  Aligned_cols=386  Identities=31%  Similarity=0.544  Sum_probs=308.0

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCC-CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGS-EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS  160 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~-~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~  160 (514)
                      .|+++.+++|+++||.||++||||.++.|++++||+ ||+|++|+.+++++..++.. ..++.+...+++++|+++++..
T Consensus        24 ~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~~~~l~~~la~~~~~~  102 (419)
T 2eo5_A           24 FPLVIDHGEGVWIYDVDGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLAHAAA-NDFYNIPQLELAKKLVTYSPGN  102 (419)
T ss_dssp             CCCCEEEEEBTEEEETTSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSCCCSC-SCSCCHHHHHHHHHHHHHSSCS
T ss_pred             CCceEEeeecCEEEECCCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCccccc-cccCCHHHHHHHHHHHHhCCCC
Confidence            678899999999999999999999999999999999 99999999999987643211 1245667889999999987432


Q ss_pred             CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCc
Q 010250          161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHY  239 (514)
Q Consensus       161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~  239 (514)
                      ..++|+|++||+||++.|+++++.+      + +++||+++++|||.+..++++++.+ .++..+......+..++.++.
T Consensus       103 ~~~~v~~~~gg~ea~~~ai~~~~~~------~-~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~  175 (419)
T 2eo5_A          103 FQKKVFFSNSGTEAIEASIKVVKNT------G-RKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNP  175 (419)
T ss_dssp             SCEEEEEESSHHHHHHHHHHHHHTT------S-CCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCS
T ss_pred             cCCEEEEeCchHHHHHHHHHHHHHh------h-CCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCcc
Confidence            1579999999999999999988633      2 5789999999999998888777754 444444433334555566555


Q ss_pred             ccCCCCCC----ChhHHHHHHHHHHH-HHHHHhC-CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEech
Q 010250          240 WRYAHPGE----TEEEYSTRLANNLE-DLILKEG-PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV  313 (514)
Q Consensus       240 ~~~~~~~~----~~~~~~~~~~~~le-~li~~~~-~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv  313 (514)
                      |+.++...    +.+++. .++++|+ +++.+.. ++++++|++||+++++|.++++++++++|+++|++||++||+|||
T Consensus       176 ~~~~~g~~~~~~~~~~~~-~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~  254 (419)
T 2eo5_A          176 YRNPWHINGYENPSELVN-RVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEV  254 (419)
T ss_dssp             SSCTTCCCTTTCHHHHHH-HHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECT
T ss_pred             ccccccccccccchhhHH-HHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecc
Confidence            54322110    001222 4578888 8776421 146899999999999999999999999999999999999999999


Q ss_pred             hcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHH
Q 010250          314 ICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK  393 (514)
Q Consensus       314 ~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~  393 (514)
                      |+|||++|..++++++++.||+++|||++++|++|+|+++++++++ .+ .     +  .+++|+++|+++++++.++|+
T Consensus       255 ~~~~g~~g~~~~~~~~~~~~d~~t~sK~~~~G~~riG~~~~~~~~~-~~-~-----~--~~~~t~~~n~~~~~aa~aal~  325 (419)
T 2eo5_A          255 QMGLGRTGKLFAIENFNTVPDVITLAKALGGGIMPIGATIFRKDLD-FK-P-----G--MHSNTFGGNALACAIGSKVID  325 (419)
T ss_dssp             TTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTTSCCEEEEEEGGGC-CC--------------CCCCCHHHHHHHHHHHH
T ss_pred             ccCCccCcchhhHHhcCCCCCEEEecccccCCccceEEEEEchHhh-cC-C-----c--ccCCCCCCCHHHHHHHHHHHH
Confidence            9999999987778888999999999999998768999999999877 55 2     1  456799999999999999999


Q ss_pred             HHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC
Q 010250          394 IYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG  473 (514)
Q Consensus       394 ~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g  473 (514)
                      .+++  +.+++++++++|.+.|+++     +..+++.|+++++++....          .... +...|+++||++.+.+
T Consensus       326 ~~~~--~~~~~~~~~~~l~~~L~~~-----~~~~~~~g~~~~i~~~~~~----------~~~~-~~~~l~~~Gv~v~~~~  387 (419)
T 2eo5_A          326 IVKD--LLPHVNEIGKIFAEELQGL-----ADDVRGIGLAWGLEYNEKK----------VRDR-IIGESFKRGLLLLPAG  387 (419)
T ss_dssp             HHHH--HHHHHHHHHHHHHHHHTTS-----SSEEEEETTEEEEECSCHH----------HHHH-HHHHHHHTTEECEEET
T ss_pred             HHHH--HHHHHHHHHHHHHHHHHHh-----hhheEeeeEEEEEEEecCc----------cHHH-HHHHHHHCCCEEecCC
Confidence            8765  8899999999999999775     3467889999999874210          1245 7888999999999875


Q ss_pred             -CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          474 -DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       474 -~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                       +.+||+|++.+|++++++++++|+++++++
T Consensus       388 ~~~lRis~~~~~t~e~i~~~l~~l~~~l~~~  418 (419)
T 2eo5_A          388 RSAIRVIPPLVISEEEAKQGLDILKKVIKVV  418 (419)
T ss_dssp             TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence             689999999999999999999999988653

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=100.00  E-value=3.6e-50  Score=413.83  Aligned_cols=371  Identities=28%  Similarity=0.492  Sum_probs=313.9

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++.+++|+++||.||++||||.+++++.+|||+||+|.+|+.++++++.+++..  .+.+...+++++|+++++   
T Consensus        18 ~~~~~~~~~g~~~~d~~g~~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~la~~~g---   92 (392)
T 3ruy_A           18 LPIVISKAEGVWVEDPEGNRYMDLLSAYSAVNQGHRHPKIINALIDQANRVTLTSRA--FHSDQLGPWYEKVAKLTN---   92 (392)
T ss_dssp             CSCEECEEEBTEEECTTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCTT--SEETTHHHHHHHHHHHHT---
T ss_pred             CCceEEeeeeCEEEeCCCCEEEEcCCChhhhccCCCCHHHHHHHHHHHHhccccccc--cCCHHHHHHHHHHHHhcC---
Confidence            789999999999999999999999999999999999999999999999876554322  356778899999999973   


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHH--HhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYY--NNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY  239 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~--~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  239 (514)
                      .++++|++||++|++.|+++++.+  ......+++++||+.+++|||.+..+.++++.+.++..+.+..+.+..++..  
T Consensus        93 ~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  170 (392)
T 3ruy_A           93 KEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPYG--  170 (392)
T ss_dssp             CSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECTT--
T ss_pred             CCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCcc--
Confidence            679999999999999999988754  1122224567999999999999988888887766665555333332222211  


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                                      ++++|++++.    +++++|+++|+++++|.+.|+++|+++|+++|++||++||+||+|+|||+
T Consensus       171 ----------------d~~~l~~~l~----~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~  230 (392)
T 3ruy_A          171 ----------------DLEALKAAIT----PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGR  230 (392)
T ss_dssp             ----------------CHHHHHHHCC----TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTT
T ss_pred             ----------------cHHHHHHHhc----cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCc
Confidence                            2577777764    57999999999999999999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|..++.+.+++.||+++|||+|+||++|+|++++++++++.+..       ..++++++.++++++++.++|+.+++++
T Consensus       231 ~g~~~~~~~~~~~~d~~~~SK~l~gG~~~~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~  303 (392)
T 3ruy_A          231 TGKVFACDWDNVTPDMYILGKALGGGVFPISCAAANRDILGVFEP-------GSHGSTFGGNPLACAVSIAALEVLEEEK  303 (392)
T ss_dssp             TSSSSGGGGGTCCCSEEEECGGGGTTTSCCEEEEECHHHHTTCCT-------TSSCCSSTTCHHHHHHHHHHHHHHHHTT
T ss_pred             cccchhhhccCCCCCEEEEchhhhCChhhhEEEEECHHHHhhhcc-------CCcCCCCCCCHHHHHHHHHHHHHHHhhh
Confidence            999888888999999999999999987899999999999887752       3567789999999999999999887788


Q ss_pred             HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEE
Q 010250          400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMM  478 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi  478 (514)
                      +.++++++++++++.|+++ ..+.+..+++.|.++.+.+.. .            ...+.+.|.++||++.+++ +.+|+
T Consensus       304 ~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~g~~~~~~~~~-~------------~~~l~~~l~~~gi~v~~~~~~~iRi  369 (392)
T 3ruy_A          304 LTERSLQLGEKLVGQLKEI-DNPMITEVRGKGLFIGIELNE-P------------ARPYCEQLKAAGLLCKETHENVIRI  369 (392)
T ss_dssp             HHHHHHHHHHHHHHHHTTC-CCTTEEEEEEETTEEEEEESS-C------------SHHHHHHHHTTTEECCCBTTTEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHh-cCCCceEEEeeeeEEEEEEcc-h------------HHHHHHHHHHCCcEEecCCCCEEEE
Confidence            9999999999999999887 336677888899999998754 1            2457888999999999875 67999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      +|++.+|++|+++++++|++++
T Consensus       370 ~~~~~~~~~~i~~~~~~l~~~l  391 (392)
T 3ruy_A          370 APPLVISEEDLEWAFQKIKAVL  391 (392)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHHH
T ss_pred             ECCCCCCHHHHHHHHHHHHHHh
Confidence            9999999999999999999876

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=100.00  E-value=9.7e-50  Score=412.26  Aligned_cols=379  Identities=29%  Similarity=0.502  Sum_probs=318.9

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++.+++|+++||.||++||||.++++++++||+||+|.+|+.++++++.+...  ..+.+...+++++|++++   +
T Consensus        21 ~~~~~~~~~g~~~~~~~g~~~lD~~~~~~~~~lg~~~p~v~~a~~~~~~~~~~~~~--~~~~~~~~~l~~~la~~~---~   95 (406)
T 4adb_A           21 APFIPVRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPELREALNEQASKFWHTGN--GYTNEPVLRLAKKLIDAT---F   95 (406)
T ss_dssp             CSSCEEEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTTCSCCCT--TSCCHHHHHHHHHHHHHS---S
T ss_pred             CCceEEeeccCEEEeCCCCEEEECCCchhhcccCCCCHHHHHHHHHHHHhcccccC--CcCCHHHHHHHHHHHhhC---C
Confidence            78899999999999999999999999999999999999999999999987544322  235677889999999997   4


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      .++++|++||++|++.|+++++.++...+.+++++||+.+++||+....+...++.+.+...+.+....+..++.+    
T Consensus        96 ~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  171 (406)
T 4adb_A           96 ADRVFFCNSGAEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYN----  171 (406)
T ss_dssp             CSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTT----
T ss_pred             CCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCC----
Confidence            5699999999999999999987765555656778999999999999888888887766554444332333222221    


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                                    ++++|++++.    +++++|+++|++++||+++++.+++++|+++|++||++||+||+|+|||++|
T Consensus       172 --------------d~~~l~~~l~----~~~~~v~~~p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g  233 (406)
T 4adb_A          172 --------------DINSASALID----DSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTG  233 (406)
T ss_dssp             --------------CHHHHHTTCS----TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS
T ss_pred             --------------cHHHHHHHhc----CCeEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc
Confidence                          1466666653    5789999999999999998899999999999999999999999999999999


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~  401 (514)
                      ..++.+.+++.||+++|||++++| +|+|++++++++++.+..       ..++++++.++++++++.++|+.++++++.
T Consensus       234 ~~~~~~~~~~~~d~~t~sK~~~~G-~r~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~  305 (406)
T 4adb_A          234 ELYAYMHYGVTPDLLTTAKALGGG-FPVGALLATEECARVMTV-------GTHGTTYGGNPLASAVAGKVLELINTPEML  305 (406)
T ss_dssp             SSSHHHHHTCCCSEEEECGGGGTT-SCCEEEEECHHHHHTCCT-------TSSCCSSTTCHHHHHHHHHHHHHHSSHHHH
T ss_pred             hhHHHHhcCCCCCEEEechhhcCC-CCeEEEEEcHHHHhhhcc-------CCcCCCCCCCHHHHHHHHHHHHHHHhcCHH
Confidence            988888899999999999999977 899999999999888763       356789999999999999999988777889


Q ss_pred             HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEe
Q 010250          402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMS  479 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~  479 (514)
                      ++++++++++++.|+++ ..++....+++.|+++++.+.+....         ....+.+.|.++||++.+.+ +.+|++
T Consensus       306 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---------~~~~~~~~l~~~gi~v~~~~~~~iRi~  376 (406)
T 4adb_A          306 NGVKQRHDWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAG---------QAKQISQEAAKAGVMVLIAGGNVVRFA  376 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTTTT---------CHHHHHHHHHHTTEECEESSTTEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCcHH---------HHHHHHHHHHHCCcEEeecCCCeEEEE
Confidence            99999999999999887 33466778888999999998653210         14568899999999999875 679999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      |++.+|++++++++++|+++++++.
T Consensus       377 ~~~~~~~e~i~~~~~~l~~~l~~~~  401 (406)
T 4adb_A          377 PALNVSEEEVTTGLDRFAAACEHFV  401 (406)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999997764

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=100.00  E-value=1.9e-50  Score=424.29  Aligned_cols=384  Identities=23%  Similarity=0.316  Sum_probs=286.8

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      +|+++.+++|+++||.||++||||.+++|++++||+||+|++|+.+++++...+    +.+.+...++++++++.++  +
T Consensus        39 ~p~~~~~~~G~~~~d~~g~~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~----~~~~~~~~~la~~l~~~~~--~  112 (453)
T 2cy8_A           39 HGLFISDAQGVHKTDVDGNVYLDFFGGHGALVLGHGHPRVNAAIAEALSHGVQY----AASHPLEVRWAERIVAAFP--S  112 (453)
T ss_dssp             CCCCEEEEEBTEEEETTCCEEEESCTTTTSCTTCBTCHHHHHHHHHHHTTTCSS----CSSCHHHHHHHHHHHHHCT--T
T ss_pred             CCceEEEeecCEEEECCCCEEEECcccHhhcccCCCCHHHHHHHHHHHHhCCCC----CCCCHHHHHHHHHHHhhCC--C
Confidence            689999999999999999999999999999999999999999999999874321    3467788899999999874  5


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC--CCCCC---CcccccCC
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK--FDLPA---PFVLHTDC  236 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~--~~~~~---~~~~~~~~  236 (514)
                      .++|+|++||+||++.|+++|+.+      .++++||+++++|||.+...+..++.. +...  .+.+.   +.+..++.
T Consensus       113 ~~~v~~~~gg~eA~~~al~~ar~~------~~~~~vi~~~~~yhg~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~  185 (453)
T 2cy8_A          113 IRKLRFTGSGTETTLLALRVARAF------TGRRMILRFEGHYHGWHDFSASGYNSH-FDGQPAPGVLPETTANTLLIRP  185 (453)
T ss_dssp             CSEEEEESCHHHHHHHHHHHHHHH------HCCCEEEEECC-----------------------------CGGGEEEECT
T ss_pred             CCEEEEeCCHHHHHHHHHHHHHHh------hCCCEEEEEcCCcCCCchhhHhhcCCc-cCCCcCCCCCccccCceeecCC
Confidence            789999999999999999998765      245689999999999988776644320 0000  01110   01111110


Q ss_pred             CCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC
Q 010250          237 PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA  316 (514)
Q Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG  316 (514)
                                        +++++|++++.+.. +++++|++||+++++|.++|+++|+++|+++|++||++||+||+|+|
T Consensus       186 ------------------~d~~~le~~l~~~~-~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g  246 (453)
T 2cy8_A          186 ------------------DDIEGMREVFANHG-SDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISG  246 (453)
T ss_dssp             ------------------TCHHHHHHHHHHHG-GGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTT
T ss_pred             ------------------CCHHHHHHHHHhcC-CCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCccc
Confidence                              12578888886532 47899999999998999999999999999999999999999999999


Q ss_pred             cccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH-H
Q 010250          317 FGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI-Y  395 (514)
Q Consensus       317 ~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~-~  395 (514)
                      | |+|..++.+++++.||++++||++++| +|+|++++++++++.+....  .+...+++||++||++++++.++|+. +
T Consensus       247 ~-~~g~~~~~~~~~~~~di~s~sK~l~~G-~~~G~v~~~~~~~~~l~~~~--~~~~~~~~t~~~n~~~~aa~~aal~~~~  322 (453)
T 2cy8_A          247 F-RVGNHGMQALLDVQPDLTCLAKASAGG-LPGGILGGREDVMGVLSRGS--DRKVLHQGTFTGNPITAAAAIAAIDTIL  322 (453)
T ss_dssp             T-TTCTTHHHHHHTCCCSEEEEEGGGGTT-SSCEEEEECHHHHTTSSSCC-----------CCCCHHHHHHHHHHHHHHH
T ss_pred             c-ccCchhhhHHhCCCCcEEEEChhhhCC-cceEEEechHHHHHHhcccc--CCCceeCCCCCCCHHHHHHHHHHHHHHh
Confidence            9 888877888899999999999999987 89999999999988875310  01234678999999999999999998 8


Q ss_pred             hhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEcc-----CCC---CCCCCCCccchHHHHHHHHHHCC
Q 010250          396 KERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFAD-----NKS---PNEPFPPEWGIGAYFGAQCEKHG  466 (514)
Q Consensus       396 ~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~-----~~~---~~~~~~~~~~~~~~~~~~l~~~G  466 (514)
                       ++++.++++++++++++.|+++ .+++++..+++.|+++++++.+     ...   -.............+...|+++|
T Consensus       323 -~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~G  401 (453)
T 2cy8_A          323 -EDDVCAKINDLGQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEG  401 (453)
T ss_dssp             -HTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTT
T ss_pred             -hhhHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCC
Confidence             7789999999999999999887 3456666788999999999864     100   00000001112456888999999


Q ss_pred             cEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          467 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       467 v~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      |++.+.+ .+|  +++.+|+++|++++++|+++++++.+
T Consensus       402 v~v~~~~-~~~--l~~~~t~~~i~~~l~~l~~~l~~~~~  437 (453)
T 2cy8_A          402 VDIGGRG-SVF--LSAQHEREHVEHLVTTFDRVLDRLAD  437 (453)
T ss_dssp             EECBTTT-EEE--CCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEeCCC-CEE--eeccCCHHHHHHHHHHHHHHHHHHHh
Confidence            9996543 455  46999999999999999999987643

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=100.00  E-value=8.7e-48  Score=400.32  Aligned_cols=396  Identities=26%  Similarity=0.479  Sum_probs=312.4

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++.+++|+++||.||++||||.++.++.++||.+|+|++|+.+++++....+. ...+.+...++++.|++++++..
T Consensus        23 ~~~~~~~~~g~~~~d~~g~~~id~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~-~~~~~~~~~~l~~~la~~~~~~~  101 (426)
T 1sff_A           23 HPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCF-QVLAYEPYLELCEIMNQKVPGDF  101 (426)
T ss_dssp             EEEEEEEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCSCCCT-TTEECHHHHHHHHHHHHHSSCSS
T ss_pred             CCceEEecccCEEEeCCCCEEEEcccChhhcccCCCCHHHHHHHHHHHHhCCCccc-cccCCHHHHHHHHHHHHhCCccc
Confidence            57899999999999999999999999999899999999999999999976543211 12356677899999999984322


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCc-cccCCCCCCCCcccccCCCCcc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLP-ALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      .++|+|++||+||++.++++++.+.      ++.+||+++++|||....++.+++.+ .++..+++....+..++++..+
T Consensus       102 ~~~v~~~~g~~~a~~~~~~~a~~~~------~~~~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~  175 (426)
T 1sff_A          102 AKKTLLVTTGSEAVENAVKIARAAT------KRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPL  175 (426)
T ss_dssp             CEEEEEESSHHHHHHHHHHHHHHHH------TCCEEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGG
T ss_pred             ccEEEEeCchHHHHHHHHHHHHHhh------CCCeEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccc
Confidence            2799999999999999999776552      23489999999999987666665543 2333443322233344444322


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHh-CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~~-~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                      +.        .....++++|++.+.+. .++++++|+++|+++++|.+.++++++++|+++|++||++||+||+|+||++
T Consensus       176 ~~--------~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~  247 (426)
T 1sff_A          176 HG--------ISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGR  247 (426)
T ss_dssp             GT--------BCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTT
T ss_pred             cc--------cchHHHHHHHHHHHHhccCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCc
Confidence            10        01123467888887642 1247899999999888998999999999999999999999999999999999


Q ss_pred             ccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       320 ~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      +|..++++.+++.||+++|||++++| +|+|++++++++++.+..       ..+.+|++.|+++++++.++|+.+++++
T Consensus       248 ~g~~~~~~~~~~~~di~s~sK~~~~G-lriG~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~aal~~~~~~~  319 (426)
T 1sff_A          248 TGTLFAMEQMGVAPDLTTFAKSIAGG-FPLAGVTGRAEVMDAVAP-------GGLGGTYAGNPIACVAALEVLKVFEQEN  319 (426)
T ss_dssp             TSSSSGGGGTTSCCSEEEECGGGGTS-SCCEEEEEEHHHHTTSCT-------TSBCCSSSSCHHHHHHHHHHHHHHHHTT
T ss_pred             ccchhhhhhcCCCCCEEEEcccccCC-CceEEEEEcHHHHhhhcc-------CCcCcCCCCCHHHHHHHHHHHHHHHhcC
Confidence            99877778888899999999999987 899999999998877752       2356789999999999999999988778


Q ss_pred             HHHHHHHHHHHHHhhhhhcc-CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CE
Q 010250          400 IVEQVNKIAPKFQDGVKAFS-DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DN  475 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l~-~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~  475 (514)
                      +.++++++++++++.|+++. .++.+..+++.|.++++++........+   .......+.+.|+++||++.+++   +.
T Consensus       320 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~l~~~l~~~gi~v~~~~~~~~~  396 (426)
T 1sff_A          320 LLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKP---DAKLTAEIVARARDKGLILLSCGPYYNV  396 (426)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEETTEEEEEEBGGGCTTSB---CHHHHHHHHHHHHHTTEECEEESTTSCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCC---ChHHHHHHHHHHHHCCcEEecCCCCCCE
Confidence            99999999999999998873 4666667788899999998642111000   01124568888999999999875   67


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      +||++++.+|++++++++++|+++++++
T Consensus       397 iRi~~~~~~~~~~i~~~~~~l~~~l~~~  424 (426)
T 1sff_A          397 LRILVPLTIEDAQIRQGLEIISQCFDEA  424 (426)
T ss_dssp             EEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999998654

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=100.00  E-value=2.5e-46  Score=385.93  Aligned_cols=374  Identities=28%  Similarity=0.545  Sum_probs=300.8

Q ss_pred             CCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC
Q 010250           81 VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS  160 (514)
Q Consensus        81 ~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~  160 (514)
                      ..|+++.+++|+++||.||++||||.+++|++++||++|+|.+|+.+++++....+..  .+.+...+++++|++++   
T Consensus        21 ~~~~~~~~~~g~~~~d~~g~~~ld~~~~~~~~~lg~~~~~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~la~~~---   95 (397)
T 2ord_A           21 RFPATFVYGKGSWIYDEKGNAYLDFTSGIAVNVLGHSHPRLVEAIKDQAEKLIHCSNL--FWNRPQMELAELLSKNT---   95 (397)
T ss_dssp             CCSCEEEEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCSCCCTT--SEEHHHHHHHHHHHHTT---
T ss_pred             CCCceEEeeecCEEEECCCCEEEECCccccccccCCCCHHHHHHHHHHHHhcccCccc--cCCHHHHHHHHHHHHhc---
Confidence            4789999999999999999999999999999999999999999999999875443221  24567789999999987   


Q ss_pred             CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcc
Q 010250          161 KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW  240 (514)
Q Consensus       161 ~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~  240 (514)
                      +.++++|++||++|++.|+++++.+... +.+++++||+++++|||.+..++...+.+.++.++.+....+..++..   
T Consensus        96 g~~~v~~~~gg~~a~~~al~~~~~~~~~-~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~---  171 (397)
T 2ord_A           96 FGGKVFFANTGTEANEAAIKIARKYGKK-KSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEFN---  171 (397)
T ss_dssp             TSCEEEEESSHHHHHHHHHHHHHHHHHH-HCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECTT---
T ss_pred             CCCeEEEeCCHHHHHHHHHHHHHHHhhc-CCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecCC---
Confidence            3579999999999999999988654322 123456899999999998876655555443222332222222222211   


Q ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250          241 RYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL  320 (514)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~  320 (514)
                                     ++++|++.+.    +++++|+++|+++++|.+.++.+++++|+++|++||++||+||+|+||+++
T Consensus       172 ---------------d~~~l~~~l~----~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~  232 (397)
T 2ord_A          172 ---------------NVEDLRRKMS----EDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRT  232 (397)
T ss_dssp             ---------------CHHHHHHHCC----TTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTT
T ss_pred             ---------------CHHHHHHHhh----cCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccC
Confidence                           2467777664    478999999999999987888899999999999999999999999999999


Q ss_pred             cccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccH
Q 010250          321 GTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI  400 (514)
Q Consensus       321 G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~  400 (514)
                      |..+..+.+++.||+++|||++++| +|+|+++++++++ .+..       ..++.+++.++++++++.++|+.++++++
T Consensus       233 g~~~~~~~~~~~~d~~s~sK~~~~G-~r~G~~~~~~~~~-~l~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~  303 (397)
T 2ord_A          233 GKLFAYQKYGVVPDVLTTAKGLGGG-VPIGAVIVNERAN-VLEP-------GDHGTTFGGNPLACRAGVTVIKELTKEGF  303 (397)
T ss_dssp             SSSSHHHHHTCCCSEEEECGGGGTT-SCCEEEEECSTTC-CCCT-------TSSCCSSTTCHHHHHHHHHHHHHHTSTTH
T ss_pred             ccchhhhhhCCCCCeeeeccccCCC-cCeEEEEEchHhc-ccCC-------CCcCCCCCCCHHHHHHHHHHHHHHHhCCH
Confidence            8766667778889999999999977 7999999998876 5431       24567889999999999999998877788


Q ss_pred             HHHHHHHHHHHHhhhhhcc-CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEE
Q 010250          401 VEQVNKIAPKFQDGVKAFS-DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMM  478 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l~-~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi  478 (514)
                      .++++++++++++.|+++. +.+.+..+++.|.++.+++.+..           ....+.+.|+++||++.+.+ +.+||
T Consensus       304 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----------~~~~l~~~l~~~gi~v~~~~~~~iRi  372 (397)
T 2ord_A          304 LEEVEEKGNYLMKKLQEMKEEYDVVADVRGMGLMIGIQFREEV-----------SNREVATKCFENKLLVVPAGNNTIRF  372 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEECTTS-----------CHHHHHHHHHHTTEECEEETTTEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCceEEEEEEeEEEEEEECChH-----------HHHHHHHHHHHCCCEEccCCCCEEEE
Confidence            9999999999999998863 45666667888999999886421           14568889999999999874 67999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +|++.++++|+++++++|++++++
T Consensus       373 s~~~~~~~e~i~~~~~~l~~~l~~  396 (397)
T 2ord_A          373 LPPLTVEYGEIDLAVETLKKVLQG  396 (397)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             ECCcCCCHHHHHHHHHHHHHHHhh
Confidence            999999999999999999988753

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=100.00  E-value=6e-44  Score=367.77  Aligned_cols=366  Identities=28%  Similarity=0.502  Sum_probs=294.2

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      +|+++.+++|+++||.+|++||||.++.+++++||.+|+|.+|+.+++++...++..  .+.+...+++++++++++ .+
T Consensus        27 ~~~~~~~~~g~~~~d~~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~la~~~~-~~  103 (395)
T 1vef_A           27 HDLLIVRGQGARVWDAEGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQT--LPTPMRGEFYRTLTAILP-PE  103 (395)
T ss_dssp             CSSCEEEEEBTEEEETTSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTT--SCCHHHHHHHHHHHHTSC-TT
T ss_pred             CCccEEecccCEEEeCCCCEEEEccCccccccCCCCCHHHHHHHHHHHHhCCCCccc--cCCHHHHHHHHHHHHhcC-CC
Confidence            788899999999999999999999999999999999999999999999875433222  245678899999999874 35


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      .+++++++||++|++.+++.++.+.      ++++||+++++||+....+....+.......+.+....+..++.     
T Consensus       104 ~~~v~~~~gg~~a~~~al~~~~~~~------~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-----  172 (395)
T 1vef_A          104 LNRVFPVNSGTEANEAALKFARAHT------GRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPY-----  172 (395)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHHH------SCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECT-----
T ss_pred             cCEEEEcCcHHHHHHHHHHHHHHHh------CCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCC-----
Confidence            6799999999999999999875432      35689999999999876655555543222111111111111111     


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                                   .++++|++.+.    +++++|+++|+++++|.+.++++++++|.++|++||++||+||+|+||++.|
T Consensus       173 -------------~d~~~l~~~i~----~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g  235 (395)
T 1vef_A          173 -------------NDVEALKRAVD----EETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTG  235 (395)
T ss_dssp             -------------TCHHHHHHHCC----TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS
T ss_pred             -------------CcHHHHHHHhc----cCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCC
Confidence                         12567777664    4689999999999999999999999999999999999999999999999888


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~  401 (514)
                      ..+..+.+++.||+++|||++++| +|+|++++++++++.+..       ..++++++.++++++++.++|+.+.++++.
T Consensus       236 ~~~~~~~~~~~~d~~s~sK~~~~g-~~~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~~al~~~~~~~~~  307 (395)
T 1vef_A          236 KRFAFEHFGIVPDILTLAKALGGG-VPLGVAVMREEVARSMPK-------GGHGTTFGGNPLAMAAGVAAIRYLERTRLW  307 (395)
T ss_dssp             SSSTHHHHTCCCSEEEECGGGGTT-SSCEEEEEEHHHHHTSCT-------TSSCCSSTTCHHHHHHHHHHHHHHHHHTTH
T ss_pred             chhHhhhcCCCCCEEEEcccccCC-CceEEEEehHHHHhhhcc-------CCcCCCcCCCHHHHHHHHHHHHHHHhCCHH
Confidence            776677788889999999999987 899999999998877653       135578889999999999999988777789


Q ss_pred             HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeC-CEEEEe
Q 010250          402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSG-DNIMMS  479 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g-~~iRi~  479 (514)
                      ++++++++++++.|+++. .+.+..+++.|.++.+.+...             ...+.+.|. ++||++.+.+ +.+||+
T Consensus       308 ~~~~~~~~~l~~~l~~~~-~~~~~~~~~~g~~~~~~~~~~-------------~~~l~~~l~~~~gi~v~~~~~~~iRi~  373 (395)
T 1vef_A          308 ERAAELGPWFMEKLRAIP-SPKIREVRGMGLMVGLELKEK-------------AAPYIARLEKEHRVLALQAGPTVIRFL  373 (395)
T ss_dssp             HHHHHHHHHHHHHHHTSC-CTTEEEEEEETTEEEEEESSC-------------SHHHHHHHHHHHCEECEESSTTEEEEC
T ss_pred             HHHHHHHHHHHHHHHHhh-cCceEEEEEEEEEEEEEEcCh-------------HHHHHHHHHHHCCeEEecCCCCEEEEe
Confidence            999999999999998873 244555677888999988531             234778888 9999999864 679999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l  500 (514)
                      +++.+|++++++++++|++++
T Consensus       374 ~~~~~~~~~i~~~~~~l~~~l  394 (395)
T 1vef_A          374 PPLVIEKEDLERVVEAVRAVL  394 (395)
T ss_dssp             CCTTCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHHh
Confidence            999999999999999998875

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=100.00  E-value=3.3e-42  Score=352.02  Aligned_cols=364  Identities=30%  Similarity=0.533  Sum_probs=287.3

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|+++.+++|+++||.+|+.||||.++.+.+++||.+|++.+++.+++++.......  .+.....++++.|+++++. .
T Consensus        10 ~~~~~~~~~g~~~~~~~g~~~ld~~~~~~~~~~g~~~~~v~~a~~~~~~~~~~~~~~--y~~~~~~~l~~~la~~~g~-~   86 (375)
T 2eh6_A           10 LPVKFVRGKGVYLYDEEGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNL--YENPWQEELAHKLVKHFWT-E   86 (375)
T ss_dssp             EEEEEEEEEBTEEEETTCCEEEESSHHHHTCTTCBSCHHHHHHHHHHHHHCSCCCTT--BCCHHHHHHHHHHHHTSSS-C
T ss_pred             CCccEEeeecCEEEeCCCCEEEEcCCcccccccCCCCHHHHHHHHHHHHhccccCcc--cCCHHHHHHHHHHHhhcCC-C
Confidence            788999999999999999999999999887899999999999999998764322111  2345678899999998732 2


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                       +++++++||++|++.++++++.+.. .+.+++++|++.+++||+....+...++.+....++.+..+.+..++.+    
T Consensus        87 -~~v~~~~g~t~a~~~~~~~~~~~~~-~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  160 (375)
T 2eh6_A           87 -GKVFFANSGTESVEAAIKLARKYWR-DKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLN----  160 (375)
T ss_dssp             -EEEEEESSHHHHHHHHHHHHHHHHH-HTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECTT----
T ss_pred             -CeEEEeCchHHHHHHHHHHHHHHhc-cCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCCc----
Confidence             8999999999999999997654421 1235567999999999998776666555443222222111112111111    


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                                    ++++|++.+.    +++++|+++|+++++|.+.++++++++|.++|++||+++|+||+|+|||+.|
T Consensus       161 --------------d~~~l~~~l~----~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~  222 (375)
T 2eh6_A          161 --------------DIDSVYKLLD----EETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTG  222 (375)
T ss_dssp             --------------CHHHHHTTCC----TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS
T ss_pred             --------------hHHHHHHHhc----CCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCC
Confidence                          1466666553    4689999999999999998999999999999999999999999999999888


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~  401 (514)
                      ..+..+.++..+|+++|||.+++| +++|++++++++++.+..       ..++.+++.++++++++.++|+.++  ++.
T Consensus       223 ~~~~~~~~~~~~d~~s~SK~~~~g-~~~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~~--~~~  292 (375)
T 2eh6_A          223 EFYAYQHFNLKPDVIALAKGLGGG-VPIGAILAREEVAQSFTP-------GSHGSTFGGNPLACRAGTVVVDEVE--KLL  292 (375)
T ss_dssp             SSSGGGGGTCCCSEEEECGGGGTT-SCCEEEEEEHHHHTTCCT-------TSCCCSSTTCHHHHHHHHHHHHHHH--HHH
T ss_pred             cchhhhhcCCCCCEEEEcccccCC-CCeEEEEEcHHHHhhhcC-------CCCCCCCCCCHHHHHHHHHHHHHHH--HHH
Confidence            666667778889999999999987 899999999998877653       1356788889999999999998775  678


Q ss_pred             HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeC
Q 010250          402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSP  480 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p  480 (514)
                      ++++++++++++.|+++.   . ..+++.|.++++++..+             ...+.+.|.++||.+.+.+ +.+|+++
T Consensus       293 ~~~~~~~~~l~~~L~~~~---~-~~~~~~g~~~~~~~~~~-------------~~~~~~~l~~~gi~~~~~~~~~iRi~~  355 (375)
T 2eh6_A          293 PHVREVGNYFKEKLKELG---K-GKVKGRGLMLGLELERE-------------CKDYVLKALEKGLLINCTAGKVLRFLP  355 (375)
T ss_dssp             HHHHHHHHHHHHHHHHTT---S-SEEEEETTEEEEECSSC-------------CHHHHHHHHHTTEECEEETTTEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHh---c-CCceEEEEEEEEEEcCc-------------HHHHHHHHHHCCCEEecCCCCEEEEEC
Confidence            899999999999998762   1 34567788888887531             2347788889999999864 6799999


Q ss_pred             CCCCCHHHHHHHHHHHHHH
Q 010250          481 PFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       481 ~~~~t~e~id~~~~~l~~~  499 (514)
                      ++.++++++++++++|+++
T Consensus       356 ~~~~~~~~i~~~~~~l~~~  374 (375)
T 2eh6_A          356 PLIIQKEHIDRAISVLREI  374 (375)
T ss_dssp             CTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHh
Confidence            9999999999999999875

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=100.00  E-value=7.4e-36  Score=310.92  Aligned_cols=348  Identities=16%  Similarity=0.165  Sum_probs=261.9

Q ss_pred             eEEE-eeeCcEEEeCCCCEEEEccCCcccccCC-CCCHHHHHHHHHHHhcCCc-c--ccccccCCchHHHHHHHHHHhcC
Q 010250           84 LVIE-KSEGSYVYDVNGKKYLDSLAGLWCTALG-GSEPRLVAAATAQLNTLPF-Y--HSFWNRTTKPSLDLAKELLEMFT  158 (514)
Q Consensus        84 ~~~~-~~~G~~~~d~dG~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~l~~~~~-~--~~~~~~~~~~~~ela~~L~~~~~  158 (514)
                      .++. +++|+++|| ||++||||.+|   .++| |.+|+|++|+.+++++... +  +....+..+...+++++|++++ 
T Consensus        48 ~~~~~~~~g~~~~~-~g~~~id~~~~---~~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~-  122 (427)
T 2w8t_A           48 IVMEQVKSPTEAVI-RGKDTILLGTY---NYMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFY-  122 (427)
T ss_dssp             CCCSEEEETTEEEE-TTEEEEECSCC---CTTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHH-
T ss_pred             eeccccCCCceEee-CCceEEEEECc---ccccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHh-
Confidence            3567 999999999 99999999998   5799 6999999999999976321 1  2222345677889999999998 


Q ss_pred             cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC
Q 010250          159 ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH  238 (514)
Q Consensus       159 ~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  238 (514)
                        +.+++++++||++|+..+++.+.         ++.+.|+++..+|+....++...+....            .+  | 
T Consensus       123 --g~~~~i~~~sGs~a~~~al~~l~---------~~gd~vl~~~~~h~~~~~~~~~~g~~~~------------~~--~-  176 (427)
T 2w8t_A          123 --GTTGAIVFSTGYMANLGIISTLA---------GKGEYVILDADSHASIYDGCQQGNAEIV------------RF--R-  176 (427)
T ss_dssp             --TCSEEEEESCHHHHHHHHHHHHS---------CTTCEEEEETTCCHHHHHHHHHSCSEEE------------EE--C-
T ss_pred             --CCCceEEecCcHHHHHHHHHHhc---------CCCCEEEECCcccHHHHHHHHHcCCeeE------------Ee--C-
Confidence              34689999999999999988752         2334455566777776555554443211            01  1 


Q ss_pred             cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc-
Q 010250          239 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF-  317 (514)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~-  317 (514)
                                     ++++++|++++.+..+.++++|+++++++++|.+.+    +++|+++|++||++||+||+|+++ 
T Consensus       177 ---------------~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~----l~~l~~l~~~~g~~li~Dea~~~~~  237 (427)
T 2w8t_A          177 ---------------HNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAP----LKEMVAVAKKHGAMVLVDEAHSMGF  237 (427)
T ss_dssp             ---------------TTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTT
T ss_pred             ---------------CCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccc
Confidence                           012578888887532226899999999999999887    999999999999999999999964 


Q ss_pred             -ccccccceecccCCCCc----hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHH
Q 010250          318 -GRLGTMFGCDKYSIKPD----LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEAL  392 (514)
Q Consensus       318 -gr~G~~~~~~~~gv~pD----iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal  392 (514)
                       +++|.. ..+++++.||    +.++||+++   .+.|++++++++++.+....   .  ...++++.+|+.++++.++|
T Consensus       238 ~~~~g~~-~~~~~~~~~~~di~~~s~sK~~g---~~gG~v~~~~~l~~~l~~~~---~--~~~~~~~~~~~~~aa~~~al  308 (427)
T 2w8t_A          238 FGPNGRG-VYEAQGLEGQIDFVVGTFSKSVG---TVGGFVVSNHPKFEAVRLAC---R--PYIFTASLPPSVVATATTSI  308 (427)
T ss_dssp             SSTTSCC-HHHHTTCTTCCSEEEEESSSTTC---SCCEEEEECCTTGGGGGGTC---H--HHHSSCCCCHHHHHHHHHHH
T ss_pred             cCCCCCc-hHhhcCCCcCCcEEEecchhhhc---cCCCEEEeCHHHHHHHHHhc---c--cccccCCCCHHHHHHHHHHH
Confidence             333433 4566777766    558999996   45699999999988886421   1  12346678899999999999


Q ss_pred             HHHhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250          393 KIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR  470 (514)
Q Consensus       393 ~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~  470 (514)
                      +.+++ +++.++++++++++++.|+++ +.++..  .+ .|.++.+.+.+..           ....+.+.|+++||++.
T Consensus       309 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~~~~~-----------~~~~l~~~L~~~Gi~v~  374 (427)
T 2w8t_A          309 RKLMTAHEKRERLWSNARALHGGLKAM-GFRLGT--ETCDSAIVAVMLEDQE-----------QAAMMWQALLDGGLYVN  374 (427)
T ss_dssp             HHHTSCHHHHHHHHHHHHHHHHHHHHH-TCEESC--SSCCSSEEEEEESSHH-----------HHHHHHHHHHHTTEECE
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHc-CCcccC--CCCCCCEEEEEECCHH-----------HHHHHHHHHHHCCeEEe
Confidence            98865 578899999999999999886 332221  22 5778888875311           24568899999999998


Q ss_pred             eeC--------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          471 VSG--------DNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       471 ~~g--------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      +..        +.|||+++..+|++||++++++|+++++++.
T Consensus       375 ~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~  416 (427)
T 2w8t_A          375 MARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVG  416 (427)
T ss_dssp             EECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHT
T ss_pred             eeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence            752        3699999999999999999999999987643

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=100.00  E-value=5.9e-36  Score=310.97  Aligned_cols=359  Identities=10%  Similarity=0.030  Sum_probs=258.7

Q ss_pred             CCeEEEeeeCcEEEeCC--CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-
Q 010250           82 HPLVIEKSEGSYVYDVN--GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-  158 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~d--G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-  158 (514)
                      .+++..+++|+++||.+  |++||||..+   .+..+.+|+|++|+.++++...+.+..  ...+...++++++.+.++ 
T Consensus        41 ~~~~~~~g~g~~~~d~~~~g~~~i~~~~~---~~~~~~~~~v~~a~~~~~~~~~~~y~~--~~~~l~~~l~~~l~~~~g~  115 (421)
T 3l8a_A           41 TTRPDRLNQFTYKWKTSENNPELLQMWVA---DMDFLPVPEIKEAIINYGREHIFGYNY--FNDDLYQAVIDWERKEHDY  115 (421)
T ss_dssp             SCCCCCTTTTBTTTGGGTTCTTCEECCSS---CCCSCCCHHHHHHHHHHHHHCCSSCBC--CCHHHHHHHHHHHHHHHCC
T ss_pred             CcccccCCCCCccccccCCCCCeeecccC---CCCCCCCHHHHHHHHHHHhcCCcCCCC--CCHHHHHHHHHHHHHHhCC
Confidence            45677899999999999  8999999766   445558999999999999864332221  124555667777777653 


Q ss_pred             cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC
Q 010250          159 ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH  238 (514)
Q Consensus       159 ~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  238 (514)
                      ..+.++|+|++||+||++.|++.++        ..+++||+.+++||+........+.... ...+..         ...
T Consensus       116 ~~~~~~v~~~~g~~ea~~~a~~~~~--------~~gd~Vi~~~~~y~~~~~~~~~~g~~~~-~~~~~~---------~~~  177 (421)
T 3l8a_A          116 AVVKEDILFIDGVVPAISIALQAFS--------EKGDAVLINSPVYYPFARTIRLNDHRLV-ENSLQI---------ING  177 (421)
T ss_dssp             CCCGGGEEEESCHHHHHHHHHHHHS--------CTEEEEEEEESCCHHHHHHHHHTTEEEE-EEECEE---------ETT
T ss_pred             CCCHHHEEEcCCHHHHHHHHHHHhc--------CCCCEEEECCCCcHHHHHHHHHCCCEEE-eccccc---------cCC
Confidence            1356789999999999999999874        3457899999999997654433222111 000000         000


Q ss_pred             cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc
Q 010250          239 YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG  318 (514)
Q Consensus       239 ~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g  318 (514)
                      .|.             .++++|++.+.+   +++++|+++++++++| +.+++++|++|+++|++||++||+||+|++|+
T Consensus       178 ~~~-------------~d~~~le~~i~~---~~~~~vil~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~  240 (421)
T 3l8a_A          178 RFE-------------IDFEQLEKDIID---NNVKIYLLCSPHNPGG-RVWDNDDLIKIAELCKKHGVILVSDEIHQDLA  240 (421)
T ss_dssp             EEE-------------CCHHHHHHHHHH---TTEEEEEEESSBTTTT-BCCCHHHHHHHHHHHHHHTCEEEEECTTTTCB
T ss_pred             Cee-------------eCHHHHHHHhhc---cCCeEEEECCCCCCCC-CcCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence            011             015788888763   3688899999999999 55677889999999999999999999999999


Q ss_pred             cccccc-ee-----cccCCCCchhchhhhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHH
Q 010250          319 RLGTMF-GC-----DKYSIKPDLVSFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEA  391 (514)
Q Consensus       319 r~G~~~-~~-----~~~gv~pDiv~~sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aa  391 (514)
                      ++|..+ .+     +..+..+++.+++|+++.+++|+|+++++ +++++.+...      .....++++|+++++++.++
T Consensus       241 ~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~------~~~~~~~~~n~~~~~a~~aa  314 (421)
T 3l8a_A          241 LFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYR------QLANNQHEVPTVGMIATQAA  314 (421)
T ss_dssp             CTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHH------HHHTTCSCCCHHHHHHHHHH
T ss_pred             cCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHH------HHhcccCCCCHHHHHHHHHH
Confidence            988532 11     22344466778999998333899999998 8998888642      12334568899999999999


Q ss_pred             HHHHhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEE-EEEccCCCCCCCCCCccchHHHHHHHHHH-CCc
Q 010250          392 LKIYKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILG-TEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGM  467 (514)
Q Consensus       392 l~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv  467 (514)
                      ++..++  +++.++++++.+++++.|+++   +.+..+++.|.++. +++......          ...+.+.|++ +||
T Consensus       315 l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~i~~~~~~~~~~~~v~~~~~~~~----------~~~l~~~l~~~~gi  381 (421)
T 3l8a_A          315 FQYGKPWLEELKTVIEGNIKLVIKELEAK---TKIKVMEPEGTYLVWLDFSAYAIA----------QPQLSEKLQNEAKV  381 (421)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHHHHHHHH---CSCEEECCSBSSEEEEECGGGTCC----------TTHHHHHHHHTTCE
T ss_pred             HhccHHHHHHHHHHHHHHHHHHHHHHHhC---CCceEeCCCeeEEEEEeccccCCC----------HHHHHHHHHHhCCE
Confidence            985332  356677888888888888776   44556677777766 777642111          2246778875 599


Q ss_pred             EEEee-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          468 LVRVS-------GDNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       468 ~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      ++.++       .+.+||+++  +++++|++++++|+++++
T Consensus       382 ~v~~g~~f~~~~~~~iRi~~~--~~~~~i~~~l~~l~~~l~  420 (421)
T 3l8a_A          382 VLNDGAHFGKEGKYFARLNVA--TPKNTVQEALSRIISVFG  420 (421)
T ss_dssp             ECEEGGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHC-
T ss_pred             EEECchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHh
Confidence            99863       367999976  699999999999998874

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=100.00  E-value=3.9e-33  Score=286.79  Aligned_cols=349  Identities=17%  Similarity=0.262  Sum_probs=259.3

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCC-CCCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhc
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALG-GSEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMF  157 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~  157 (514)
                      .|..+.+++|.+++| ||++||||.++   +++| |++|++.+++.+++.+....   +.+..+..+...++++.+++++
T Consensus        26 ~~~~~~~~~g~~v~~-~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  101 (399)
T 3tqx_A           26 SERIITSPQNAEIKV-GEKEVLNFCAN---NYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFL  101 (399)
T ss_dssp             CCCCBCSCSSSEEEE-TTEEEEECSSC---CTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHH
T ss_pred             ccccccCCCCceEee-CCeeEEEeecc---CcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHH
Confidence            345678999999999 99999999998   7899 79999999999999764332   1222345667789999999998


Q ss_pred             CcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC
Q 010250          158 TASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP  237 (514)
Q Consensus       158 ~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  237 (514)
                      +   .++.+++++|++|+..+++.+.        .+++.|++ ...+|+.........+.....            ++..
T Consensus       102 ~---~~~~i~~~sGt~a~~~~l~~~~--------~~gd~v~~-~~~~~~~~~~~~~~~g~~~~~------------~~~~  157 (399)
T 3tqx_A          102 G---TDDTILYSSCFDANGGLFETLL--------GPEDAIIS-DELNHASIIDGIRLCKAQRYR------------YKNN  157 (399)
T ss_dssp             T---CSEEEEESCHHHHHHTTHHHHC--------CTTCEEEE-ETTCCHHHHHHHHSCCSEEEE------------ECTT
T ss_pred             C---CCcEEEECchHHHHHHHHHHhc--------CCCCEEEE-CCcccHHHHHHHHHcCCceeE------------eCCC
Confidence            3   3568888899999999998763        22345555 555556554444444432211            1110


Q ss_pred             CcccCCCCCCChhHHHHHHHHHHHHHHHHhCC--CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc
Q 010250          238 HYWRYAHPGETEEEYSTRLANNLEDLILKEGP--ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC  315 (514)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~--~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t  315 (514)
                                        +.++|++++.+...  .++++|+++++++++|.+.+    +++|.++|++||+++|+||+|.
T Consensus       158 ------------------d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~  215 (399)
T 3tqx_A          158 ------------------AMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIAD----LKSICDLADKYNALVMVDDSHA  215 (399)
T ss_dssp             ------------------CTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTT
T ss_pred             ------------------CHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCcc
Confidence                              13567777765322  26889999999999999887    9999999999999999999994


Q ss_pred             -Cc-ccccccceecccCC--CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHH
Q 010250          316 -AF-GRLGTMFGCDKYSI--KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAI  389 (514)
Q Consensus       316 -G~-gr~G~~~~~~~~gv--~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~  389 (514)
                       |+ ++.|.. ..+.+++  .+|++  +++|+++ | .+.|++++++++++.+....     .....+.+.++++++++.
T Consensus       216 ~~~~~~~~~~-~~~~~~~~~~~di~~~s~sK~~~-g-~~gG~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  287 (399)
T 3tqx_A          216 VGFIGENGRG-TPEYCGVADRVDILTGTLGKALG-G-ASGGYTSGHKEIIEWLRNRS-----RPYLFSNTVAPVIVATSL  287 (399)
T ss_dssp             TTTSSTTSCC-HHHHHTCTTCCSEEEEESSSSSC-S-SCCEEEEECHHHHHHHHHHC-----HHHHSSCCCCHHHHHHHH
T ss_pred             ccccCCCCCc-hHHhhCCCCCCcEEEecchHhcc-c-CceEEEEcCHHHHHHHHHhC-----cceeccCCCcHHHHHHHH
Confidence             54 444432 4566676  68988  7899998 4 57799999999998887421     112235567899999999


Q ss_pred             HHHHHH-h-hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250          390 EALKIY-K-ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM  467 (514)
Q Consensus       390 aal~~~-~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv  467 (514)
                      ++++.+ + .+++.++++++++++.+.|+++ ..+..   .+.|.++.+.+.+..           ....+.+.|.++||
T Consensus       288 ~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~---~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~gi  352 (399)
T 3tqx_A          288 KVLELLKTEGPQLRKQLQENSRYFRAGMEKL-GFQLV---PGNHPIIPVMLGDAQ-----------LATNMADHLLQEGI  352 (399)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-TCCBC---CCSSSEEEEEEECHH-----------HHHHHHHHHHHTTE
T ss_pred             HHHHHHhhccHHHHHHHHHHHHHHHHHHHHc-CCCcC---CCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCC
Confidence            999987 3 2567889999999999999887 33322   456778888775321           24568899999999


Q ss_pred             EEEee-------C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          468 LVRVS-------G-DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       468 ~~~~~-------g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ++.+.       + +.+||+++..+|++++++++++|+++++++
T Consensus       353 ~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  396 (399)
T 3tqx_A          353 YVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL  396 (399)
T ss_dssp             ECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             EEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence            99853       2 369999999999999999999999998754

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=100.00  E-value=1.5e-34  Score=299.22  Aligned_cols=339  Identities=17%  Similarity=0.179  Sum_probs=253.7

Q ss_pred             EeeeCcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCc---cccccccCCchHHHHHHHHHHhcCcCCC
Q 010250           87 EKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPF---YHSFWNRTTKPSLDLAKELLEMFTASKM  162 (514)
Q Consensus        87 ~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~---~~~~~~~~~~~~~ela~~L~~~~~~~~~  162 (514)
                      .++.+.+++|.+|++||||.++   +++|+ .||+|++|+.+++++...   .+....+..+...++++++++++   +.
T Consensus        46 ~~~~~~~~~~~~g~~~ld~~s~---~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~---g~  119 (409)
T 3kki_A           46 KNGKHLVLGKQASPDDIILQSN---DYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFT---GF  119 (409)
T ss_dssp             TTSSCTTCCCCCCTTSEECCCS---CTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHH---TC
T ss_pred             cCCCeeeeCCCCCCceEEeecc---CccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHh---CC
Confidence            3667788899999999999887   66777 689999999999987432   22233345566788999999997   34


Q ss_pred             CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccC
Q 010250          163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRY  242 (514)
Q Consensus       163 ~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (514)
                      +.++++++|++|++.+++...         ++.+.|+++..+|+....++...+.....            ++.      
T Consensus       120 ~~~i~~~sGt~a~~~~l~~~~---------~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~------------~~~------  172 (409)
T 3kki_A          120 DECLLSQSGWNANVGLLQTIC---------QPNTNVYIDFFAHMSLWEGARYANAQAHP------------FMH------  172 (409)
T ss_dssp             SEEEEESCHHHHHHHHHHHHC---------CTTCEEEEETTSCHHHHHHHHHTTCEEEE------------ECT------
T ss_pred             CeEEEecchHHHHHHHHHHhc---------CCCCEEEECCCcCHHHHHHHHHcCCeEEE------------ecC------
Confidence            578889999999999998763         23344455666676665555444432210            000      


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC--cccc
Q 010250          243 AHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA--FGRL  320 (514)
Q Consensus       243 ~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG--~gr~  320 (514)
                                  .++++|++++.+.   ++++|+++++++++|.+.+    +++|+++|++||++||+||+|++  +|++
T Consensus       173 ------------~d~~~le~~l~~~---~~~~vi~~~~~nptG~~~~----l~~l~~la~~~~~~li~De~~~~g~~g~~  233 (409)
T 3kki_A          173 ------------NNCDHLRMLIQRH---GPGIIVVDSIYSTLGTIAP----LAELVNISKEFGCALLVDESHSLGTHGPN  233 (409)
T ss_dssp             ------------TCHHHHHHHHHHH---CSCEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSGG
T ss_pred             ------------CCHHHHHHHHHhc---CCeEEEECCCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCccccccCCC
Confidence                        1257888888753   2479999999999998887    99999999999999999999997  7888


Q ss_pred             cccceecccCC--CCch--hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh
Q 010250          321 GTMFGCDKYSI--KPDL--VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK  396 (514)
Q Consensus       321 G~~~~~~~~gv--~pDi--v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~  396 (514)
                      |..+. ..+++  .+|+  .++||++++|   .|++++++++++.+....     ....++...++++++++.++++.++
T Consensus       234 g~~~~-~~~~~~~~~di~~~s~sK~~~~~---gg~v~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~aa~~aal~~~~  304 (409)
T 3kki_A          234 GAGLL-AELGLTREVHFMTASLAKTFAYR---AGAIWCNNEVNRCVPFIS-----YPAIFSSTLLPYEAAGLETTLEIIE  304 (409)
T ss_dssp             GCCHH-HHHTCGGGCSEEEEESSSTTCSS---CEEEEESSSGGGTHHHHC-----HHHHHSBCCCHHHHHHHHHHHHHHH
T ss_pred             CCcch-hhcCCCCCCCEEEeecchhhCCC---ceEEEECHHHHHHHHHhC-----cCccccCCCcHHHHHHHHHHHHHHh
Confidence            76544 55566  4677  5789999876   489999999888776421     1112234478899999999999886


Q ss_pred             h-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---
Q 010250          397 E-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---  472 (514)
Q Consensus       397 ~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---  472 (514)
                      + +++.++++++++++++.|+++ ...+    .+.|.++++.+.+..           ....+.+.|+++||++.+.   
T Consensus       305 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~----~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~Gv~v~~~~~~  368 (409)
T 3kki_A          305 SADNRRQHLDRMARKLRIGLSQL-GLTI----RSESQIIGLETGDER-----------NTEKVRDYLESNGVFGSVFCRP  368 (409)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHTT-TCCC----CCSSSEEEEEEESHH-----------HHHHHHHHHHHTTEECEEECTT
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHc-CCcc----CCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCceEeeeCCC
Confidence            5 467889999999999999876 3222    246788888875421           2456888999999998642   


Q ss_pred             ----C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          473 ----G-DNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       473 ----g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                          + +.|||+++..+|+++|++++++|+++++.
T Consensus       369 ~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~  403 (409)
T 3kki_A          369 ATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNY  403 (409)
T ss_dssp             SSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhc
Confidence                2 46999999999999999999999998864

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=100.00  E-value=1.3e-33  Score=291.07  Aligned_cols=350  Identities=19%  Similarity=0.241  Sum_probs=257.4

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCccc---cccccCCchHHHHHHHHHHhc
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYH---SFWNRTTKPSLDLAKELLEMF  157 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~~---~~~~~~~~~~~ela~~L~~~~  157 (514)
                      .|.++.+++|+++||.||++||||.++   +++|| .+|++.+++.+++++....+   .+..+..+...++++.|++++
T Consensus        27 ~~~~~~~~~g~~~~~~~g~~~id~~~~---~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  103 (401)
T 1fc4_A           27 EERIITSAQQADITVADGSHVINFCAN---NYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL  103 (401)
T ss_dssp             CCCCBCSCSSSEEEBTTSCEEEECCCS---CTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH
T ss_pred             eeeeeccCCCceEEeeCCccEEEeecc---CcccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh
Confidence            567789999999999999999999988   67997 89999999999987633221   111123566789999999998


Q ss_pred             CcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC
Q 010250          158 TASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP  237 (514)
Q Consensus       158 ~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  237 (514)
                      +   .++.+++++|++|++.+++.+.         ++.+.|.+...+|+....++...|....            .++. 
T Consensus       104 g---~~~~i~~~sGs~a~~~~~~~~~---------~~gd~v~~~~~~~~~~~~~~~~~g~~~~------------~~~~-  158 (401)
T 1fc4_A          104 G---MEDAILYSSCFDANGGLFETLL---------GAEDAIISDALNHASIIDGVRLCKAKRY------------RYAN-  158 (401)
T ss_dssp             T---CSEEEEESCHHHHHHTTHHHHC---------CTTCEEEEETTCCHHHHHHHHTSCSEEE------------EECT-
T ss_pred             C---CCcEEEeCChHHHHHHHHHHHc---------CCCCEEEEcchhHHHHHHHHHHcCCceE------------EECC-
Confidence            3   3367788999999999988763         2223444555566655444433332211            1110 


Q ss_pred             CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCC--cEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc
Q 010250          238 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPE--TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC  315 (514)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~--~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t  315 (514)
                                       .+.++|++++.+..++  ++++|+++++++++|.+.+    +++|.++|++||+++|+||+|.
T Consensus       159 -----------------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~De~~~  217 (401)
T 1fc4_A          159 -----------------NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIAN----LKGVCDLADKYDALVMVDDSHA  217 (401)
T ss_dssp             -----------------TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECC----HHHHHHHHHHTTEEEEEECTTT
T ss_pred             -----------------CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCC----HHHHHHHHHHcCCEEEEECccc
Confidence                             0146778777643211  5788999999999998887    9999999999999999999995


Q ss_pred             -Cc-ccccccceecccCCC--Cchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHH
Q 010250          316 -AF-GRLGTMFGCDKYSIK--PDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAI  389 (514)
Q Consensus       316 -G~-gr~G~~~~~~~~gv~--pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~  389 (514)
                       |+ +++|..+ .+.+++.  .|++  +++|.++|+.  .|++++++++++.+....     ..+..+++.++++++++.
T Consensus       218 ~g~~~~~g~~~-~~~~~~~~~~di~~~s~sK~~~~~~--gG~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~a~~  289 (401)
T 1fc4_A          218 VGFVGENGRGS-HEYCDVMGRVDIITGTLGKALGGAS--GGYTAARKEVVEWLRQRS-----RPYLFSNSLAPAIVAASI  289 (401)
T ss_dssp             TTTSSTTSCCH-HHHTTCTTCCSEEEEESSSTTCSSS--CEEEEECHHHHHHHHHHC-----HHHHHSCCCCHHHHHHHH
T ss_pred             ccccCCCCCcc-HHHcCCCcCCcEEEecchhhccCCC--CEEEEcCHHHHHHHHHhC-----cCceeCCCCCHHHHHHHH
Confidence             87 3566543 3345554  4777  7899997652  589999999998886421     112346678999999999


Q ss_pred             HHHHHHhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcE
Q 010250          390 EALKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGML  468 (514)
Q Consensus       390 aal~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~  468 (514)
                      ++|+.+++ +++.++++++++++.+.|+++ ...+.   .+.|.++.+.+.+..           ....+.+.|.++||+
T Consensus       290 ~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~---~~~~~~~~~~~~~~~-----------~~~~l~~~l~~~gi~  354 (401)
T 1fc4_A          290 KVLEMVEAGSELRDRLWANARQFREQMSAA-GFTLA---GADHAIIPVMLGDAV-----------VAQKFARELQKEGIY  354 (401)
T ss_dssp             HHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCCBC---CSSSSEEEEEEECHH-----------HHHHHHHHHHHTTEE
T ss_pred             HHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCccc---CCCCCEEEEEcCChH-----------HHHHHHHHHHHCCcE
Confidence            99998764 467889999999999999886 33332   357788888875311           245688899999999


Q ss_pred             EEeeC--------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          469 VRVSG--------DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       469 ~~~~g--------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      +.++.        +.+||+++..+|++++++++++|+++++++
T Consensus       355 v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~  397 (401)
T 1fc4_A          355 VTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL  397 (401)
T ss_dssp             CCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             EeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence            98652        359999998899999999999999988654

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=100.00  E-value=9.8e-32  Score=275.57  Aligned_cols=356  Identities=11%  Similarity=0.062  Sum_probs=249.9

Q ss_pred             eEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCC
Q 010250           84 LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKM  162 (514)
Q Consensus        84 ~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~  162 (514)
                      ++..+++|+++||.+|++||||..+   .+..+.+|+|.+|+.+++.+..+.+..  ...+...++++.+.+.++ +...
T Consensus        11 ~~~~~~~g~~~~d~~g~~~i~~~~~---~~~~~~~~~v~~a~~~~~~~~~~~y~~--~~~~l~~~la~~l~~~~g~~~~~   85 (391)
T 3dzz_A           11 HVPKRQGNSIKWGVLKEKELPMWIA---EMDFKIAPEIMASMEEKLKVAAFGYES--VPAEYYKAVADWEEIEHRARPKE   85 (391)
T ss_dssp             SCCCCCTTBTTTTTCCTTCEECCSS---CCSSCCCHHHHHHHHHHHTTCCCCCBC--CCHHHHHHHHHHHHHHHSCCCCG
T ss_pred             hhccCCCCccceeccCCCceecccc---CCCCCCCHHHHHHHHHHHhcCcCCCCC--CCHHHHHHHHHHHHHHhCCCCCH
Confidence            5677899999999999999999877   444458999999999999764322111  133455667777776653 1346


Q ss_pred             CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC---CCc
Q 010250          163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC---PHY  239 (514)
Q Consensus       163 ~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~---~~~  239 (514)
                      +++++++||++|++.+++.+.        .++++|++.+++||+........+....             .++.   ...
T Consensus        86 ~~i~~~~g~~~a~~~~~~~l~--------~~gd~vl~~~~~~~~~~~~~~~~g~~~~-------------~~~~~~~~~~  144 (391)
T 3dzz_A           86 DWCVFASGVVPAISAMVRQFT--------SPGDQILVQEPVYNMFYSVIEGNGRRVI-------------SSDLIYENSK  144 (391)
T ss_dssp             GGEEEESCHHHHHHHHHHHHS--------CTTCEEEECSSCCHHHHHHHHHTTCEEE-------------ECCCEEETTE
T ss_pred             HHEEECCCHHHHHHHHHHHhC--------CCCCeEEECCCCcHHHHHHHHHcCCEEE-------------EeeeeecCCc
Confidence            799999999999999999873        3457899999999987544333222111             0111   000


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                      |.             .++++|++.+.+   .++++|+++..++++|.+. +++.+++|.++|++||+++|+||+|+++++
T Consensus       145 ~~-------------~d~~~l~~~l~~---~~~~~v~i~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~  207 (391)
T 3dzz_A          145 YS-------------VNWADLEEKLAT---PSVRMMVFCNPHNPIGYAW-SEEEVKRIAELCAKHQVLLISDEIHGDLVL  207 (391)
T ss_dssp             EE-------------CCHHHHHHHHTS---TTEEEEEEESSBTTTTBCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBC
T ss_pred             ee-------------ecHHHHHHHHhc---cCceEEEEECCCCCCCccc-CHHHHHHHHHHHHHCCCEEEEecccccccC
Confidence            00             115778877752   3567777777788888765 557799999999999999999999999988


Q ss_pred             ccc-cceecccCC-CCc----hhchhhhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHH
Q 010250          320 LGT-MFGCDKYSI-KPD----LVSFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEAL  392 (514)
Q Consensus       320 ~G~-~~~~~~~gv-~pD----iv~~sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal  392 (514)
                      .|. ......++. .+|    +.+++|+++.+++++|+++++ +++++.+...      .....+++.++++++++.+++
T Consensus       208 ~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~~l  281 (391)
T 3dzz_A          208 TDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEES------FFLAGIGEPNLLAIPAAIAAY  281 (391)
T ss_dssp             SSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHH------HHHHTCSSCCTTHHHHHHHHH
T ss_pred             CCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHH------HHhhccCCCCHHHHHHHHHHH
Confidence            875 333333332 277    457899997333899999997 8998888642      122346678899999999888


Q ss_pred             HHHh--hccHHHHHHHHHHHHHhhhhh-ccCCCceeEEEeee-eeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCc
Q 010250          393 KIYK--ERNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGM  467 (514)
Q Consensus       393 ~~~~--~~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv  467 (514)
                      +...  .++..++++++.+++.+.|++ +..   +......+ .+..+.+.....          ....+.+.|+ ++||
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~gi  348 (391)
T 3dzz_A          282 EEGHDWLRELKQVLRDNFAYAREFLAKEVPE---VKVLDSNASYLAWVDISALGM----------NAEDFCKYLREKTGL  348 (391)
T ss_dssp             HHCHHHHHHHHHHHHHHHHHHHHHHHHHCTT---SEECCCCBSSEEEEECGGGCS----------CHHHHHHHHHHHHCE
T ss_pred             hccHHHHHHHHHHHHHHHHHHHHHHHhhCCC---cEEeccCceEEEEEehhhcCC----------CHHHHHHHHHHhCCE
Confidence            7632  235677788888888888887 432   22222333 344566654211          1456788885 8999


Q ss_pred             EEEeeC-------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          468 LVRVSG-------DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       468 ~~~~~g-------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ++.++.       +.+|++++  +++++|++++++|+++++++
T Consensus       349 ~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l~~~  389 (391)
T 3dzz_A          349 IISAGNGYRGNGHEFVRINLA--CPKELVIDGMQRLKQGVLNL  389 (391)
T ss_dssp             ECEESGGGCTTGGGEEEEECC--SCHHHHHHHHHHHHHHHHTC
T ss_pred             EEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHHHh
Confidence            998742       57999965  79999999999999988654

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=100.00  E-value=4.2e-31  Score=272.03  Aligned_cols=348  Identities=17%  Similarity=0.210  Sum_probs=254.3

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhc
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMF  157 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~  157 (514)
                      .|+++.+++|+++| .||+.||||.+|   .++|+ .+|++.+++.+++++....   +....+..+...++++++++++
T Consensus        26 ~~~~~~~~~g~~~~-~~g~~~idl~~~---~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~  101 (398)
T 3a2b_A           26 YFRPIQSKQDTEVK-IDGRRVLMFGSN---SYLGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYV  101 (398)
T ss_dssp             SSCCBCSCSSSEEE-ETTEEEEECSCS---CTTCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH
T ss_pred             ceeeecCCCCceEE-ECCceEEEeecc---cccCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHh
Confidence            66788999999999 999999999988   45888 8999999999998763321   1122335577788999999987


Q ss_pred             CcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC
Q 010250          158 TASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP  237 (514)
Q Consensus       158 ~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  237 (514)
                      +   .+++++++||++|++.+++.+.        .+++.|++.++. |+.....+...|....            .++..
T Consensus       102 g---~~~v~~~~ggt~a~~~~~~~~~--------~~gd~V~~~~p~-~~~~~~~~~~~g~~~~------------~v~~~  157 (398)
T 3a2b_A          102 G---KEAAILFSTGFQSNLGPLSCLM--------GRNDYILLDERD-HASIIDGSRLSFSKVI------------KYGHN  157 (398)
T ss_dssp             T---CSEEEEESSHHHHHHHHHHHSS--------CTTCEEEEETTC-CHHHHHHHHHSSSEEE------------EECTT
T ss_pred             C---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEECCcc-CHHHHHHHHHcCCceE------------EeCCC
Confidence            3   4699999999999999998763        233456665555 4544444433332211            11111


Q ss_pred             CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC-
Q 010250          238 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA-  316 (514)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG-  316 (514)
                                        +.++|++++.+..++++++|+++++++++|.+.+    +++|.++|++||+++|+||+|+. 
T Consensus       158 ------------------d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~----~~~l~~~~~~~~~~li~De~~~~~  215 (398)
T 3a2b_A          158 ------------------NMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVN----LPELTSIANEFDAAVMVDDAHSLG  215 (398)
T ss_dssp             ------------------CHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTT
T ss_pred             ------------------CHHHHHHHHHhhccCCceEEEEeCCCCCCCCccC----HHHHHHHHHHcCcEEEEECCCccc
Confidence                              1478888886432226789999999999998876    99999999999999999999973 


Q ss_pred             -cccccccceecccCCC--Cchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHH
Q 010250          317 -FGRLGTMFGCDKYSIK--PDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEA  391 (514)
Q Consensus       317 -~gr~G~~~~~~~~gv~--pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aa  391 (514)
                       +++.+... .+.+++.  +|++  +++|.++..+   |++++++++++.+...     ...+..+...+++.++++.++
T Consensus       216 ~~~~~~~~~-~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~a~~~~~  286 (398)
T 3a2b_A          216 VIGHKGAGT-ASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDADVIDFLKHN-----ARSVMFSASMTPASVASTLKA  286 (398)
T ss_dssp             TSSGGGCCH-HHHHTCGGGCSEEEEESSSTTCSSC---EEEEECHHHHHHHHHH-----CHHHHSSBCCCHHHHHHHHHH
T ss_pred             ccCCCCCch-HhhcCCCcCCeEEEecccccccCCC---cEEEeCHHHHHHHHHh-----cccceecCCCCHHHHHHHHHH
Confidence             34444332 3445554  6888  7899987422   8899999998888641     012345666778888788888


Q ss_pred             HHHHhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250          392 LKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR  470 (514)
Q Consensus       392 l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~  470 (514)
                      |+.++. ++..++++++++++.+.|+++ ...+.   .+.|.++++.+.+..           ....+.+.|.++||.+.
T Consensus       287 l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~---~~~g~~~~~~~~~~~-----------~~~~l~~~l~~~gi~v~  351 (398)
T 3a2b_A          287 LEIIQNEPEHIEKLWKNTDYAKAQLLDH-GFDLG---ATESPILPIFIRSNE-----------KTFWVTKMLQDDGVFVN  351 (398)
T ss_dssp             HHHHHHCTHHHHHHHHHHHHHHHHHHHT-TCCBC---SCCSSEEEEECCCHH-----------HHHHHHHHHHHTTEECE
T ss_pred             HHHHhhCHHHHHHHHHHHHHHHHHHHhc-CCCcC---CCCCCEEEEEcCCHH-----------HHHHHHHHHHHCCcEEE
Confidence            887654 367889999999999999886 33332   345778888774210           24568889999999998


Q ss_pred             eeC--------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          471 VSG--------DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       471 ~~g--------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ++.        +.+|++++..+|++++++++++|+++++++
T Consensus       352 ~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~  392 (398)
T 3a2b_A          352 PVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQA  392 (398)
T ss_dssp             EECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             eeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence            752        569999988889999999999999998754

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=100.00  E-value=4.1e-31  Score=270.66  Aligned_cols=343  Identities=17%  Similarity=0.225  Sum_probs=251.7

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCC-CCCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhc
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALG-GSEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMF  157 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~  157 (514)
                      .|.++.+++|+++| .+|++||||.++   .++| +.+|++.+++.+++++....   +.+..+..+...++++.|++++
T Consensus        22 ~~~~~~~~~g~~~~-~~g~~~id~~~~---~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~   97 (384)
T 1bs0_A           22 RRYPVAQGAGRWLV-ADDRQYLNFSSN---DYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL   97 (384)
T ss_dssp             CCCCCSBCSSSEEE-ETTEEEEECSCC---CTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH
T ss_pred             ccccccCCCCceEE-ECCceEEEeecc---CccCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh
Confidence            56778999999999 799999999988   4588 58999999999998763221   1121234577789999999998


Q ss_pred             CcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC
Q 010250          158 TASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP  237 (514)
Q Consensus       158 ~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  237 (514)
                      +   .++++++++|++|+..+++.+.         ++.+.|+++..+|+.+...+...|....            .++..
T Consensus        98 g---~~~~i~~~sGt~a~~~~~~~~~---------~~gd~v~~~~~~~~~~~~~~~~~g~~~~------------~~~~~  153 (384)
T 1bs0_A           98 G---YSRALLFISGFAANQAVIAAMM---------AKEDRIAADRLSHASLLEAASLSPSQLR------------RFAHN  153 (384)
T ss_dssp             T---CSEEEEESCHHHHHHHHHHHHC---------CTTCEEEEETTCCHHHHHHHHTSSSEEE------------EECTT
T ss_pred             C---CCcEEEeCCcHHHHHHHHHHhC---------CCCcEEEEcccccHHHHHHHHHcCCCEE------------EeCCC
Confidence            3   4578899999999999998752         2334556666777776555544443211            11110


Q ss_pred             CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-C
Q 010250          238 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-A  316 (514)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G  316 (514)
                                        +.++|++++.+.. +.+++|+++++++++|.+.+    +++|.++|++||+++|+||+|. |
T Consensus       154 ------------------d~~~l~~~l~~~~-~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~  210 (384)
T 1bs0_A          154 ------------------DVTHLARLLASPC-PGQQMVVTEGVFSMDGDSAP----LAEIQQVTQQHNGWLMVDDAHGTG  210 (384)
T ss_dssp             ------------------CHHHHHHHHHSCC-SSCEEEEEESBCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTTTT
T ss_pred             ------------------CHHHHHHHHHhcC-CCCeEEEEeCCCCCCCCccC----HHHHHHHHHHcCcEEEEECCcccc
Confidence                              1477888876432 23689999999999999887    9999999999999999999996 4


Q ss_pred             c-ccccccceecccCCCCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHH
Q 010250          317 F-GRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK  393 (514)
Q Consensus       317 ~-gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~  393 (514)
                      + +++|..+. +.++..+|++  +++|.++.   +.|++++++++++.+....     .....+++.++++++++.++|+
T Consensus       211 ~~~~~~~~~~-~~~~~~~di~~~s~sK~~~~---~GG~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~al~  281 (384)
T 1bs0_A          211 VIGEQGRGSC-WLQKVKPELLVVTFGKGFGV---SGAAVLCSSTVADYLLQFA-----RHLIYSTSMPPAQAQALRASLA  281 (384)
T ss_dssp             TSSGGGCCHH-HHTTCCCSEEEEESSSTTSS---CCEEEEECHHHHHHHHHHC-----HHHHSSBCCCHHHHHHHHHHHH
T ss_pred             eecCCCCchH-HhcCCCCcEEEeeccchhhc---cCcEEEeCHHHHHHHHHhc-----hhhhcCCCCCHHHHHHHHHHHH
Confidence            3 44554332 5566678988  78999873   4489999999988876421     1223455789999999999999


Q ss_pred             HHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250          394 IYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR  470 (514)
Q Consensus       394 ~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~  470 (514)
                      .+++   +++.++++++++++.+.|+++ ...+   ..+.|.++++.+.+..           ....+.+.|.++||.+.
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~---~~~~~~~~~~~~~~~~-----------~~~~l~~~l~~~gi~v~  346 (384)
T 1bs0_A          282 VIRSDEGDARREKLAALITRFRAGVQDL-PFTL---ADSCSAIQPLIVGDNS-----------RALQLAEKLRQQGCWVT  346 (384)
T ss_dssp             HHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEE---CSCCSSBCCEEEESHH-----------HHHHHHHHHHHTTEECC
T ss_pred             HHhccccHHHHHHHHHHHHHHHHHHHhc-CCcc---cCCCCCEEEEEeCCHH-----------HHHHHHHHHHHCCcEEE
Confidence            8763   467888999999999999875 2111   1245667777764210           24568889999999998


Q ss_pred             eeC--------CEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250          471 VSG--------DNIMMSPPFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       471 ~~g--------~~iRi~p~~~~t~e~id~~~~~l~~~  499 (514)
                      +..        +.+||+++..+|++++++++++|+++
T Consensus       347 ~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~  383 (384)
T 1bs0_A          347 AIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  383 (384)
T ss_dssp             EECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             eecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence            652        46999999889999999999999764

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=100.00  E-value=6e-32  Score=275.93  Aligned_cols=350  Identities=12%  Similarity=0.081  Sum_probs=241.0

Q ss_pred             eEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCC
Q 010250           84 LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKM  162 (514)
Q Consensus        84 ~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~  162 (514)
                      +-..+++|+++||.||++||||.+|.  +.++ .+|+|.+|+.+++.+..+.+.. .+ .+....+++.+.+.++. .+.
T Consensus         7 ~~~~~~~g~~~~d~~g~~~idl~~~~--~~~~-~~~~v~~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~   81 (377)
T 3fdb_A            7 IEDLRARNTMKWTRYGQGVLPLWVAE--SDFS-TCPAVLQAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQARP   81 (377)
T ss_dssp             HHHHHHTCCHHHHSSCTTSEECCSSC--CCSC-CCHHHHHHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCG
T ss_pred             HHHhcCCCCceeeccCCCeeeecccC--CCCC-CCHHHHHHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCH
Confidence            33458999999999999999998883  3444 8999999999999863222221 22 45555666666554321 346


Q ss_pred             CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccC
Q 010250          163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRY  242 (514)
Q Consensus       163 ~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (514)
                      +++++++||++|++.+++.+.        .++++|++.+++||+........+....             .++....   
T Consensus        82 ~~i~~t~g~~~a~~~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~g~~~~-------------~~~~~~~---  137 (377)
T 3fdb_A           82 EWIFPIPDVVRGLYIAIDHFT--------PAQSKVIVPTPAYPPFFHLLSATQREGI-------------FIDATGG---  137 (377)
T ss_dssp             GGEEEESCHHHHHHHHHHHHS--------CTTCCEEEEESCCTHHHHHHHHHTCCEE-------------EEECTTS---
T ss_pred             HHEEEeCChHHHHHHHHHHhc--------CCCCEEEEcCCCcHhHHHHHHHcCCEEE-------------EccCCCC---
Confidence            799999999999999998763        2346899999999997644333222111             1111100   


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc-
Q 010250          243 AHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG-  321 (514)
Q Consensus       243 ~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G-  321 (514)
                                  .++++|++.+.+   +..+.+++.| ++++|.+. +.+.+++|+++|++||+++|+||+|+++++.| 
T Consensus       138 ------------~d~~~l~~~l~~---~~~~v~i~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~  200 (377)
T 3fdb_A          138 ------------INLHDVEKGFQA---GARSILLCNP-YNPLGMVF-APEWLNELCDLAHRYDARVLVDEIHAPLVFDGQ  200 (377)
T ss_dssp             ------------CCHHHHHHHHHT---TCCEEEEESS-BTTTTBCC-CHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSC
T ss_pred             ------------CCHHHHHHHhcc---CCCEEEEeCC-CCCCCCCC-CHHHHHHHHHHHHHcCCEEEEEcccchhhcCCC
Confidence                        125788888763   2345555555 77778765 56779999999999999999999999988877 


Q ss_pred             cc----ceecccCCCCchhchhhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh
Q 010250          322 TM----FGCDKYSIKPDLVSFAKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK  396 (514)
Q Consensus       322 ~~----~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~  396 (514)
                      ..    ...+..+..+++.++||.++.+++++|++++ ++++++.+..       ..+..+++.++++++++.++|+..+
T Consensus       201 ~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~  273 (377)
T 3fdb_A          201 HTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQ-------LSPVIKDGASTLGLIAAEAAYRYGT  273 (377)
T ss_dssp             CCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHH-------SCHHHHCCCCHHHHHHHHHHHHHCH
T ss_pred             CCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHHHHHHH-------HHHhhcCCCCHHHHHHHHHHHhccH
Confidence            21    1222222334566899999644489998776 7888888864       2344567889999999999988532


Q ss_pred             h--ccHHHHHHHHHHHHHhhhhh-ccCCCceeEEEeeeee-EEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEe
Q 010250          397 E--RNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGLI-LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRV  471 (514)
Q Consensus       397 ~--~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~v~g~g~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~  471 (514)
                      +  ++..++++++.+++.+.|++ +..   +....+.+.+ .++.+.......           .+...|+++ ||++.+
T Consensus       274 ~~~~~~~~~~~~~~~~l~~~L~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~~gi~v~~  339 (377)
T 3fdb_A          274 DFLNQEVAYLKNNHDFLLHEIPKRIPG---AKITPMQATYLMWIDFRDTTIEG-----------SPSEFFIEKAKVAMND  339 (377)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHSTT---CEECCCSBCSEEEEECTTSCCCS-----------CHHHHHHHHHCEECEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhCCC---ceEecCCeeEEEEEECcccCCCH-----------HHHHHHHHhCCEEecC
Confidence            2  45677888888888888877 332   2223334444 457775432111           255666665 999986


Q ss_pred             e-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          472 S-------GDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       472 ~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +       .+.+|++++  .++++|++++++|++++++
T Consensus       340 g~~~~~~~~~~~Ris~~--~~~e~i~~~l~~l~~~l~~  375 (377)
T 3fdb_A          340 GAWFGEDGTGFCRLNFA--TSREVLEEAIDRMAKAVSH  375 (377)
T ss_dssp             GGGGCGGGTTEEEEECC--SCHHHHHHHHHHHHHHHTT
T ss_pred             ChhccCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHhh
Confidence            4       367999965  5999999999999998754

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.97  E-value=4.5e-29  Score=256.17  Aligned_cols=353  Identities=10%  Similarity=0.009  Sum_probs=223.6

Q ss_pred             eEEEeeeCcEEEeCCCC-----EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCc-hHHHHHHHHHHhc
Q 010250           84 LVIEKSEGSYVYDVNGK-----KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTK-PSLDLAKELLEMF  157 (514)
Q Consensus        84 ~~~~~~~G~~~~d~dG~-----~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~-~~~ela~~L~~~~  157 (514)
                      ++-.+++|+++||.+|+     +||||.++.  ..+| .+|+|.+|+.++++.....+..  ...+ ....+++.+.+.+
T Consensus         7 ~~~~~~~~~~~~d~~~~~~~~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~y~~--~~~~~lr~~la~~l~~~~   81 (390)
T 1d2f_A            7 VVDRHGTWCTQWDYVADRFGTADLLPFTISD--MDFA-TAPCIIEALNQRLMHGVFGYSR--WKNDEFLAAIAHWFSTQH   81 (390)
T ss_dssp             -----------------------CEECCSSS--CSSC-CCHHHHHHHHHHHTTCCCCCCC--SCCHHHHHHHHHHHHHHS
T ss_pred             cccccCCCccchhhhccccCCCCeeEeeecC--CCCC-CCHHHHHHHHHHHhCCCCCCCC--CChHHHHHHHHHHHHHhc
Confidence            34568999999999998     789997664  4577 7899999999998753221111  1223 4444555554443


Q ss_pred             C-cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC
Q 010250          158 T-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC  236 (514)
Q Consensus       158 ~-~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~  236 (514)
                      + ..+.+++++++||++|++.+++.+.        .++++|++.+++||+........ |....            .++.
T Consensus        82 g~~~~~~~v~~t~g~~~al~~~~~~l~--------~~gd~vl~~~p~y~~~~~~~~~~-g~~~~------------~v~~  140 (390)
T 1d2f_A           82 YTAIDSQTVVYGPSVIYMVSELIRQWS--------ETGEGVVIHTPAYDAFYKAIEGN-QRTVM------------PVAL  140 (390)
T ss_dssp             CCCCCGGGEEEESCHHHHHHHHHHHSS--------CTTCEEEEEESCCHHHHHHHHHT-TCEEE------------EEEC
T ss_pred             CCCCCHHHEEEcCCHHHHHHHHHHHhc--------CCCCEEEEcCCCcHHHHHHHHHC-CCEEE------------Eeec
Confidence            2 1345789999999999999998763        23478999999999976443322 21111            1111


Q ss_pred             C---CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEech
Q 010250          237 P---HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV  313 (514)
Q Consensus       237 ~---~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv  313 (514)
                      .   ..|.             .++++|++.+.+   .++++|++...++++|.+. +.+++++|.++|++||+++|+||+
T Consensus       141 ~~~~~~~~-------------~d~~~l~~~l~~---~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~  203 (390)
T 1d2f_A          141 EKQADGWF-------------CDMGKLEAVLAK---PECKIMLLCSPQNPTGKVW-TCDELEIMADLCERHGVRVISDEI  203 (390)
T ss_dssp             EECSSSEE-------------CCHHHHHHHHTS---TTEEEEEEESSCTTTCCCC-CTTHHHHHHHHHHHTTCEEEEECT
T ss_pred             ccCCCccc-------------cCHHHHHHHhcc---CCCeEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCCEEEEEcc
Confidence            0   0011             115777777752   2466666555577778765 568999999999999999999999


Q ss_pred             hcCcccccccceecccCCCC---c-hhchhhhhc-CCcccceeEEeC-HHHHHHhhhccCCCCcccc-cCCC-CCcHHHH
Q 010250          314 ICAFGRLGTMFGCDKYSIKP---D-LVSFAKALS-SAYMPIGAILVS-PEVSEVIHSQSNTLGSFSH-GFTY-SGHPVSC  385 (514)
Q Consensus       314 ~tG~gr~G~~~~~~~~gv~p---D-iv~~sK~l~-gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~-~~t~-~~~pl~~  385 (514)
                      |+++++.|..+. ....+.+   | +.++||.++ .| +++|+++++ +++++.+...       .. ..++ +.+++++
T Consensus       204 ~~~~~~~g~~~~-~~~~~~~~~~d~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~  274 (390)
T 1d2f_A          204 HMDMVWGEQPHI-PWSNVARGDWALLTSGSKSFNIPA-LTGAYGIIENSSSRDAYLSA-------LKGRDGLSSPSVLAL  274 (390)
T ss_dssp             TTTCBCSSSCCC-CGGGTCCSSEEEEECSHHHHTCGG-GCCEEEEECSHHHHHHHHHH-------HHTTSCCCSCCHHHH
T ss_pred             ccccccCCCCCc-CHHHcchhhHhhccCccHhhcccC-hhheEEEECCHHHHHHHHHH-------HhhhcccCCCCHHHH
Confidence            999877765321 1222322   3 778999997 55 899999985 7888877631       23 3455 6789999


Q ss_pred             HHHHHHHHHHhh--ccHHHHHHHHHHHHHhhhhh-ccCCCceeEEEeeee-eEEEEEccCCCCCCCCCCccchHHHHHHH
Q 010250          386 AVAIEALKIYKE--RNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQ  461 (514)
Q Consensus       386 aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~v~g~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  461 (514)
                      +++.++++..++  ++..++++++.+++.+.|++ +...   ..+++.|. +.++++.....          ....+.+.
T Consensus       275 ~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~---~~~~~~~~~~~~~~~~~~~~----------~~~~l~~~  341 (390)
T 1d2f_A          275 TAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPEL---NWQIPQSTYLAWLDLRPLNI----------DDNALQKA  341 (390)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSC---CCCCCSBCSEEEEECGGGCC----------CHHHHHHH
T ss_pred             HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCC---EEecCCccEEEEEEccccCC----------CHHHHHHH
Confidence            999888874221  34566777888888888876 4322   22334444 44677754210          13457788


Q ss_pred             HH-HCCcEEEee-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          462 CE-KHGMLVRVS-------GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       462 l~-~~Gv~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      |. ++||++.++       .+.+||+++.  ++++|++++++|+++++++
T Consensus       342 l~~~~gi~v~~g~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l~~~  389 (390)
T 1d2f_A          342 LIEQEKVAIMPGYTYGEEGRGFVRLNAGC--PRSKLEKGVAGLINAIRAV  389 (390)
T ss_dssp             HHHTTCEECEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHcCEEeeCccccCCCCCCeEEEEecC--CHHHHHHHHHHHHHHHHhh
Confidence            88 689999874       2579999764  6899999999999988653

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=99.97  E-value=3.1e-30  Score=264.35  Aligned_cols=352  Identities=10%  Similarity=0.034  Sum_probs=243.4

Q ss_pred             eEEEeeeCcEEEeCCCCEE-----EEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC
Q 010250           84 LVIEKSEGSYVYDVNGKKY-----LDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT  158 (514)
Q Consensus        84 ~~~~~~~G~~~~d~dG~~y-----lD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~  158 (514)
                      ++..+++|+++||.+|++|     |||.++   .+..+.+|+|.+|+.+++.+..+.+.  .+..+...++++++.+.++
T Consensus        11 ~~~~~~~g~~~~d~~~~~~~~~~~i~l~~~---~~~~~~~~~v~~a~~~~~~~~~~~y~--~~~~~~~~~l~~~l~~~~g   85 (391)
T 4dq6_A           11 IVDRSNNFSSKWSEMEKKYGTNDLLPMWVA---DMDFKAAPCIIDSLKNRLEQEIYGYT--TRPDSYNESIVNWLYRRHN   85 (391)
T ss_dssp             CCCCTTTTBHHHHCHHHHHSCSCSEECCSS---SCSSCCCHHHHHHHHHHHTTCCCCCB--CCCHHHHHHHHHHHHHHHC
T ss_pred             ccccccCCceeeeecccccCCCCceecccc---CCCCCCCHHHHHHHHHHHhCCCCCCC--CCCHHHHHHHHHHHHHHhC
Confidence            4456889999999987666     999877   44445799999999999976432221  1245666778888888764


Q ss_pred             c-CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC
Q 010250          159 A-SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP  237 (514)
Q Consensus       159 ~-~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  237 (514)
                      . .+.+++++++||++|++.+++.+.        .++++|++.+++||+........+....             .++..
T Consensus        86 ~~~~~~~v~~~~g~~~a~~~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~g~~~~-------------~~~~~  144 (391)
T 4dq6_A           86 WKIKSEWLIYSPGVIPAISLLINELT--------KANDKIMIQEPVYSPFNSVVKNNNRELI-------------ISPLQ  144 (391)
T ss_dssp             CCCCGGGEEEESCHHHHHHHHHHHHS--------CTTCEEEECSSCCTHHHHHHHHTTCEEE-------------ECCCE
T ss_pred             CCCcHHHeEEcCChHHHHHHHHHHhC--------CCCCEEEEcCCCCHHHHHHHHHcCCeEE-------------eeeee
Confidence            1 346789999999999999999873        3357899999999997644433222111             01110


Q ss_pred             ----CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEech
Q 010250          238 ----HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV  313 (514)
Q Consensus       238 ----~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv  313 (514)
                          ..|+             .++++|++.+.    + +++|+++..++++|.+. +++.+++|+++|++||+++|+||+
T Consensus       145 ~~~~~~~~-------------~d~~~l~~~l~----~-~~~v~i~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~  205 (391)
T 4dq6_A          145 KLENGNYI-------------MDYEDIENKIK----D-VKLFILCNPHNPVGRVW-TKDELKKLGDICLKHNVKIISDEI  205 (391)
T ss_dssp             ECTTSCEE-------------CCHHHHHHHCT----T-EEEEEEESSBTTTTBCC-CHHHHHHHHHHHHHTTCEEEEECT
T ss_pred             ecCCCceE-------------eeHHHHHHHhh----c-CCEEEEECCCCCCCcCc-CHHHHHHHHHHHHHcCCEEEeecc
Confidence                0011             01467777664    2 66676666688888765 567799999999999999999999


Q ss_pred             hcCcccccccc-eeccc-----CCCCchhchhhhhcCCcccceeEEeCH-HHHHHhhhccCCCCcccccCCCCCcHHHHH
Q 010250          314 ICAFGRLGTMF-GCDKY-----SIKPDLVSFAKALSSAYMPIGAILVSP-EVSEVIHSQSNTLGSFSHGFTYSGHPVSCA  386 (514)
Q Consensus       314 ~tG~gr~G~~~-~~~~~-----gv~pDiv~~sK~l~gG~~pig~v~~~~-~i~~~l~~~~~~~~~~~~~~t~~~~pl~~a  386 (514)
                      |++|++.|... ....+     +....+.+++|.++.+++++|++++++ ++++.+...      ..+..+++.++++++
T Consensus       206 ~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~  279 (391)
T 4dq6_A          206 HSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDDA------FTRIDIKRNNCFSLV  279 (391)
T ss_dssp             TTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHH------HHHTTCCCCCHHHHH
T ss_pred             ccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHHH------HHhhcCCCCCHHHHH
Confidence            99998777532 12111     111234478999973338999999875 888887642      123346678999999


Q ss_pred             HHHHHHHHHh--hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeE-EEEEccCCCCCCCCCCccchHHHHHHHHH
Q 010250          387 VAIEALKIYK--ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLIL-GTEFADNKSPNEPFPPEWGIGAYFGAQCE  463 (514)
Q Consensus       387 aa~aal~~~~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~  463 (514)
                      ++.++++..+  -++..++++++.+++.+.|++.  .+.+..+.+.+.++ ++++.....          ....+.+.|.
T Consensus       280 a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~  347 (391)
T 4dq6_A          280 ATEASYNNGESWLESFLEYLESNIDFAIKYINEN--MPKLKVRKPEGTYLLWVDFSALGL----------SDEELESILV  347 (391)
T ss_dssp             HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH--CTTSEECCCSBSSEEEEECGGGCC----------CHHHHHHHHH
T ss_pred             HHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhh--CCCCEecCCCccEEEEEEhhhcCC----------CHHHHHHHHH
Confidence            9999887532  1345677778888888888762  12233334445544 477754211          1456888999


Q ss_pred             HC-CcEEEee-------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          464 KH-GMLVRVS-------GDNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       464 ~~-Gv~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      ++ ||++.++       .+.+|++++  +++++|++++++|++++
T Consensus       348 ~~~gi~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l  390 (391)
T 4dq6_A          348 QKGKVALNQGNSFGIGGSGYQRINLA--CPRSMLEEALIRIKNAI  390 (391)
T ss_dssp             HTTCEECEEGGGGCTTCTTEEEEECC--SCHHHHHHHHHHHHHHH
T ss_pred             HhCCEEeeCchhhCCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence            98 9999874       267999965  79999999999999876

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=99.97  E-value=1.6e-29  Score=260.16  Aligned_cols=351  Identities=13%  Similarity=0.074  Sum_probs=236.3

Q ss_pred             EEEeeeCcEEEeCCCC-------EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHh-
Q 010250           85 VIEKSEGSYVYDVNGK-------KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEM-  156 (514)
Q Consensus        85 ~~~~~~G~~~~d~dG~-------~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~-  156 (514)
                      +..+++|+++||.+|+       .++||.++.  ..++ .+|.|.+++.++++.....+.     .. ..++.+.++++ 
T Consensus         9 ~~~~~~g~~~~d~~g~~~g~~~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~y~-----~~-~~~l~~~la~~l   79 (399)
T 1c7n_A            9 ISRKNLGSLKWDLMYSQNPEVGNEVVPLSVAD--MEFK-NPPELIEGLKKYLDETVLGYT-----GP-TEEYKKTVKKWM   79 (399)
T ss_dssp             CCCTTTTBHHHHHHHHHCTTCCTTCCCCCSSS--CSSC-CCHHHHHHHHHHHHHCCCSSB-----CC-CHHHHHHHHHHH
T ss_pred             ccccCCCccccccchhhccccCCCceeeeecC--CCCC-CCHHHHHHHHHHHhcCCCCCC-----CC-cHHHHHHHHHHH
Confidence            4458999999999884       789997764  3455 689999999999865322111     11 34555555554 


Q ss_pred             ---cC-cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCccc
Q 010250          157 ---FT-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVL  232 (514)
Q Consensus       157 ---~~-~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~  232 (514)
                         ++ +.+.+++++++||++|++.+++.+.        ..+++|++.+++||+........ |....            
T Consensus        80 ~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~-g~~~~------------  138 (399)
T 1c7n_A           80 KDRHQWDIQTDWIINTAGVVPAVFNAVREFT--------KPGDGVIIITPVYYPFFMAIKNQ-ERKII------------  138 (399)
T ss_dssp             HHHHCCCCCGGGEEEESSHHHHHHHHHHHHC--------CTTCEEEECSSCCTHHHHHHHTT-TCEEE------------
T ss_pred             HHHhCCCCChhhEEEcCCHHHHHHHHHHHhc--------CCCCEEEEcCCCcHhHHHHHHHc-CCEEE------------
Confidence               32 1346789999999999999998763        23468999999999976443322 21111            


Q ss_pred             ccCCC-C--cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEE
Q 010250          233 HTDCP-H--YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFI  309 (514)
Q Consensus       233 ~~~~~-~--~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI  309 (514)
                      .++.. .  .|.             .++++|++.+.+   .++++|++...++++|.+. +++++++|.++|++||+++|
T Consensus       139 ~~~~~~~~g~~~-------------~d~~~l~~~l~~---~~~~~v~~~~~~nptG~~~-~~~~l~~i~~~~~~~~~~li  201 (399)
T 1c7n_A          139 ECELLEKDGYYT-------------IDFQKLEKLSKD---KNNKALLFCSPHNPVGRVW-KKDELQKIKDIVLKSDLMLW  201 (399)
T ss_dssp             ECCCEEETTEEE-------------CCHHHHHHHHTC---TTEEEEEEESSBTTTTBCC-CHHHHHHHHHHHHHSSCEEE
T ss_pred             ecccccCCCCEE-------------EcHHHHHHHhcc---CCCcEEEEcCCCCCCCcCc-CHHHHHHHHHHHHHcCCEEE
Confidence            11110 0  011             115777777752   3466777666677788754 67899999999999999999


Q ss_pred             EechhcCccccccc-ceeccc-----CCCCchhchhhhhc-CCcccceeEEeC-HHHHHHhhhccCCCCcccccCCC-CC
Q 010250          310 ADEVICAFGRLGTM-FGCDKY-----SIKPDLVSFAKALS-SAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTY-SG  380 (514)
Q Consensus       310 ~DEv~tG~gr~G~~-~~~~~~-----gv~pDiv~~sK~l~-gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~-~~  380 (514)
                      +||+|++|++.|.. .....+     +....+.++||.++ .| +++|+++++ +++++.+...       ....++ +.
T Consensus       202 ~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~l~~~-------~~~~~~~~~  273 (399)
T 1c7n_A          202 SDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAG-MGMSNIIIKNPDIRERFTKS-------RDATSGMPF  273 (399)
T ss_dssp             EECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGG-GCCEEEECCCHHHHHHHHHH-------HHHTTCCCC
T ss_pred             EEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccc-hheEEEEECCHHHHHHHHHH-------HhhcccCCC
Confidence            99999998777642 222222     22223457899998 45 899999996 6788887642       222334 56


Q ss_pred             cHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhhhhh-ccCCCceeEEEeeeee-EEEEEccCCCCCCCCCCccchHH
Q 010250          381 HPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGLI-LGTEFADNKSPNEPFPPEWGIGA  456 (514)
Q Consensus       381 ~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~v~g~g~~-~~i~~~~~~~~~~~~~~~~~~~~  456 (514)
                      ++++++++.++|+...+  ++..++++++.+++.+.|++ +..   +..+++.|.+ .++++.....          ...
T Consensus       274 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~---~~~~~~~~~~~~~~~~~~~~~----------~~~  340 (399)
T 1c7n_A          274 TTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPE---IKAPLIEGTYLQWIDFRALKM----------DHK  340 (399)
T ss_dssp             CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTT---SBCCCCSBSSEEEEECGGGCC----------CHH
T ss_pred             CHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCC---CeEecCCceEEEEEEcccCCC----------CHH
Confidence            89999999888874211  24566677888888888876 422   2223344544 4577754210          144


Q ss_pred             HHHHHHH-HCCcEEEee-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          457 YFGAQCE-KHGMLVRVS-------GDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       457 ~~~~~l~-~~Gv~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      .+.+.|+ ++||++.++       .+.|||+++.  ++++|++++++|.++++++.+
T Consensus       341 ~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~--~~~~l~~~l~~l~~~l~~~~~  395 (399)
T 1c7n_A          341 AMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA--PSSVIQESLERLNKALKDLKN  395 (399)
T ss_dssp             HHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS--CHHHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc--CHHHHHHHHHHHHHHHHHHHh
Confidence            5778887 689999874       2579999764  589999999999999987654

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=99.96  E-value=4.7e-28  Score=251.84  Aligned_cols=358  Identities=12%  Similarity=0.024  Sum_probs=230.1

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccc---cCCchHHHHHHHHHHhcCc-CCCC-eEEEeCChhHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWN---RTTKPSLDLAKELLEMFTA-SKMA-KVFFTNSGSEA  174 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~---~~~~~~~ela~~L~~~~~~-~~~~-~v~~~~sGseA  174 (514)
                      ..+|||.+|..  .+| .+|+|.+|+.+++++.......+.   +..+....+++.+.+.++. .+.+ ++++++||++|
T Consensus        37 ~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a  113 (429)
T 1yiz_A           37 YKPLNLGQGFP--DYH-APKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEA  113 (429)
T ss_dssp             HCCEECCSSSC--SSC-CCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHH
T ss_pred             CCEEEecCCCC--CCC-CCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHH
Confidence            35899988753  567 689999999999976321111111   1223333444444443331 3457 89999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      ++.+++.+.        ..+++|++.+++||+....... .|..................  ...|.             
T Consensus       114 ~~~~~~~~~--------~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~--~~~~~-------------  169 (429)
T 1yiz_A          114 LYATIQGHV--------DEGDEVIIIEPFFDCYEPMVKA-AGGIPRFIPLKPNKTGGTIS--SADWV-------------  169 (429)
T ss_dssp             HHHHHHHHC--------CTTCEEEEEESCCTTHHHHHHH-TTCEEEEEECBCCCSSSSEE--GGGCB-------------
T ss_pred             HHHHHHHhc--------CCCCEEEEcCCCchhHHHHHHH-cCCEEEEEeCCccccccccc--ccCcc-------------
Confidence            999999873        2346899999999997543322 22111100000000000000  00000             


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eec----cc
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCD----KY  329 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~----~~  329 (514)
                      .++++|++.+.    +++++|+++++++++|.+. +++++++|+++|++||+++|+||+|++|++.|..+ .+.    .+
T Consensus       170 ~d~~~l~~~l~----~~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~  244 (429)
T 1yiz_A          170 LDNNELEALFN----EKTKMIIINTPHNPLGKVM-DRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMW  244 (429)
T ss_dssp             CCHHHHHHHCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTG
T ss_pred             cCHHHHHHHhc----cCceEEEECCCCCCCCccC-CHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCc
Confidence            11466776663    4678888888888889775 57899999999999999999999999987766421 221    23


Q ss_pred             CCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH-----Hhhc----cH
Q 010250          330 SIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI-----YKER----NI  400 (514)
Q Consensus       330 gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~-----~~~~----~~  400 (514)
                      +..+++.++||.++.+++|+|++++++++++.+..       ..+..+++.++++++++.++|+.     ...+    +.
T Consensus       245 ~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~  317 (429)
T 1yiz_A          245 ERTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQM-------VHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSI  317 (429)
T ss_dssp             GGEEEEEEHHHHHTCGGGCCEEEESCHHHHHHHHH-------HHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHH
T ss_pred             CceEEEecchhccCCCCcceEEEEeCHHHHHHHHH-------HHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHH
Confidence            34455668999998433899999999999988863       23446788899999999999987     3212    34


Q ss_pred             HHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCC-CCCCccchHHHHHHHHH-HCCcEEEee------
Q 010250          401 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNE-PFPPEWGIGAYFGAQCE-KHGMLVRVS------  472 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~l~-~~Gv~~~~~------  472 (514)
                      .++++++++++.+.|+++ .  +.......|.++++++.....+.. +..........+.+.|+ ++||++.++      
T Consensus       318 ~~~~~~~~~~l~~~L~~~-g--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~  394 (429)
T 1yiz_A          318 SGELMAKRDYMASFLAEV-G--MNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSE  394 (429)
T ss_dssp             HHHHHHHHHHHHHHHHHH-T--CEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCG
T ss_pred             HHHHHHHHHHHHHHHHhC-C--CcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCC
Confidence            556777777888888765 2  221122246788888764311000 00000012445777776 799999863      


Q ss_pred             ------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          473 ------GDNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       473 ------g~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                            .+.|||+++  .++++|++++++|+++++
T Consensus       395 ~~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l~  427 (429)
T 1yiz_A          395 PNKHLGEDFVRYCFF--KKDENLQKAAEILRKWKG  427 (429)
T ss_dssp             GGGGGTTTEEEEECC--SCHHHHHHHHHHHHHHSC
T ss_pred             cccCCCCCeEEEEec--CCHHHHHHHHHHHHHhcc
Confidence                  357999976  599999999999998764

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=99.96  E-value=9.8e-28  Score=247.48  Aligned_cols=345  Identities=17%  Similarity=0.134  Sum_probs=237.1

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----Cc-CCCCeEEEeCChh
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----TA-SKMAKVFFTNSGS  172 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~~-~~~~~v~~~~sGs  172 (514)
                      .|+.+|||.+|.. ...||.+|.|.+++.+++++..... .+. ......++.+.+++++    +. ...+++++++||+
T Consensus        32 ~g~~~idl~~g~~-~~~~~~~~~v~~a~~~~~~~~~~~~-~y~-~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t  108 (407)
T 2zc0_A           32 KGVKLISLAAGDP-DPELIPRAVLGEIAKEVLEKEPKSV-MYT-PANGIPELREELAAFLKKYDHLEVSPENIVITIGGT  108 (407)
T ss_dssp             SSCCCEECCSCCC-CTTTSCHHHHHHHHHHHHHHCGGGG-SCC-CTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHH
T ss_pred             CCCceEeCCCCCC-CchhCCHHHHHHHHHHHHhhccccc-cCC-CCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHH
Confidence            3788999988865 3568899999999999987642111 111 1222355666666655    31 3457899999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY  252 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (514)
                      +|++.+++.++        ..+++|++.+++||+...... ..|...            ..++....      +      
T Consensus       109 ~a~~~~~~~~~--------~~gd~vl~~~p~~~~~~~~~~-~~g~~~------------~~v~~~~~------~------  155 (407)
T 2zc0_A          109 GALDLLGRVLI--------DPGDVVITENPSYINTLLAFE-QLGAKI------------EGVPVDND------G------  155 (407)
T ss_dssp             HHHHHHHHHHC--------CTTCEEEEEESCCHHHHHHHH-TTTCEE------------EEEEEETT------E------
T ss_pred             HHHHHHHHHhc--------CCCCEEEEeCCChHHHHHHHH-HcCCEE------------EEcccCCC------C------
Confidence            99999999874        234789999999998753322 222111            11111000      0      


Q ss_pred             HHHHHHHHHHHHHHh--CCCcEEEE-EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceecc
Q 010250          253 STRLANNLEDLILKE--GPETIAAF-IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDK  328 (514)
Q Consensus       253 ~~~~~~~le~li~~~--~~~~~aav-ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~  328 (514)
                        .++++|++.+.+.  ...++++| +++..++++|.+. +.+++++|.++|++||+++|+||+|+++.+.|.. .....
T Consensus       156 --~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  232 (407)
T 2zc0_A          156 --MRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTM-SMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKA  232 (407)
T ss_dssp             --ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGG
T ss_pred             --CCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCC-CHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhh
Confidence              1257787777521  11256776 4566678888765 5789999999999999999999999988766653 22323


Q ss_pred             cCCC---CchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH--h---hccH
Q 010250          329 YSIK---PDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY--K---ERNI  400 (514)
Q Consensus       329 ~gv~---pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~--~---~~~~  400 (514)
                      ++..   .++.++||.++.| +++|++++++++++.+...       ....+++.++++++++.++|+..  +   -++.
T Consensus       233 ~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  304 (407)
T 2zc0_A          233 LDNEGRVIVAGTLSKVLGTG-FRIGWIIAEGEILKKVLMQ-------KQPIDFCAPAISQYIALEYLKRGYFEKYHLEGA  304 (407)
T ss_dssp             GCSSCCEEEEEESTTTTCTT-SCCEEEECCHHHHHHHHHH-------HTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTH
T ss_pred             cCCCCCEEEEcccccccCCC-cceEEEecCHHHHHHHHHH-------HHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHH
Confidence            3222   3455789999966 8999999999999888642       33456777899999988888753  2   1356


Q ss_pred             HHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee------
Q 010250          401 VEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS------  472 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~------  472 (514)
                      .++++++.+++.+.|++. .......  ...|.++++.+.+..           ....+.+.|.++ ||++.++      
T Consensus       305 ~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~~~~~~~~~~~~-----------~~~~l~~~l~~~~gi~v~~g~~~~~~  371 (407)
T 2zc0_A          305 LLGYKEKRDIMLKALENHLPNAEFTK--PIAGMFVMFFLPEGA-----------DGISFANELMEREGVVVVPGKPFYTD  371 (407)
T ss_dssp             HHHHHHHHHHHHHHHHHHCTTSCBCC--CSBSSEEEEECSTTC-----------CHHHHHHHHHHHTCEECBCSGGGCSS
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCEEec--CCCcEEEEEEcCCCC-----------CHHHHHHHHHHhCCeEEECchhccCC
Confidence            777888888999988763 2222221  234667778775311           145678888888 9999863      


Q ss_pred             ---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          473 ---GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       473 ---g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                         .+.+||+++.. |+++|++++++|+++++++
T Consensus       372 ~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~  404 (407)
T 2zc0_A          372 ESGKNAIRLNFSRP-SKEEIPIGIKKLAKLYKEK  404 (407)
T ss_dssp             SCCTTEEEEECSSS-CTTHHHHHHHHHHHHHHHH
T ss_pred             CCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHH
Confidence               25799998766 8999999999999998765

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=99.96  E-value=9.6e-28  Score=243.28  Aligned_cols=338  Identities=13%  Similarity=0.108  Sum_probs=222.9

Q ss_pred             CeEEEeeeCcEEEe-CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           83 PLVIEKSEGSYVYD-VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        83 p~~~~~~~G~~~~d-~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      ++++.+|.+.+.++ .+|+++|||.+|.  ++++ .+|+|.+|+.++++....+      +.....++++.++++++ .+
T Consensus         8 ~~~~~~g~~~~~~~~~~~~~~idl~~~~--~~~~-~~~~v~~a~~~~~~~~~~y------~~~~~~~l~~~la~~~~-~~   77 (361)
T 3ftb_A            8 GDLMIHGGDIYTEGVFKGRELLDYSSNI--NPLG-IPKSFLNNIDEGIKNLGVY------PDVNYRRLNKSIENYLK-LK   77 (361)
T ss_dssp             --------------------CEETTCCC--CTTC-SCHHHHTTHHHHHHGGGSC------CCTTCHHHHHHHHHHHT-CC
T ss_pred             CccccCCCCHHHHhhcCCCCEEEecCCC--CCCC-CCHHHHHHHHHHHHHhcCC------CCccHHHHHHHHHHHhC-CC
Confidence            35555665555544 4899999999885  4566 6899999999998764222      23445789999999884 35


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      .+++++++||++|++.+++.+            ++|++.+++||+........+....             .++....  
T Consensus        78 ~~~i~~~~g~t~al~~~~~~~------------d~vi~~~~~~~~~~~~~~~~g~~~~-------------~~~~~~~--  130 (361)
T 3ftb_A           78 DIGIVLGNGASEIIELSISLF------------EKILIIVPSYAEYEINAKKHGVSVV-------------FSYLDEN--  130 (361)
T ss_dssp             SCEEEEESSHHHHHHHHHTTC------------SEEEEEESCCTHHHHHHHHTTCEEE-------------EEECCTT--
T ss_pred             cceEEEcCCHHHHHHHHHHHc------------CcEEEecCChHHHHHHHHHcCCeEE-------------EeecCcc--
Confidence            679999999999999998753            6899999999987544333221111             1111100  


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                      .   +     +   +++++++.+.+    ..+.++..| ++++|.+. +.+.+++|.++|++||+++|+||+|+++++.+
T Consensus       131 ~---~-----~---~~~~l~~~l~~----~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~  193 (361)
T 3ftb_A          131 M---C-----I---DYEDIISKIDD----VDSVIIGNP-NNPNGGLI-NKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDP  193 (361)
T ss_dssp             S---C-----C---CHHHHHHHTTT----CSEEEEETT-BTTTTBCC-CHHHHHHHHHHHHHHTCEEEEECSSGGGTCCT
T ss_pred             c---C-----C---CHHHHHHhccC----CCEEEEeCC-CCCCCCCC-CHHHHHHHHHHhhhcCCEEEEECcchhhcCCc
Confidence            0   0     0   03667776642    334444555 66677655 56779999999999999999999999886642


Q ss_pred             ccceecccCCCCchh---chhhhhcCCcccceeEE-eCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh
Q 010250          322 TMFGCDKYSIKPDLV---SFAKALSSAYMPIGAIL-VSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE  397 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv---~~sK~l~gG~~pig~v~-~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~  397 (514)
                      ........+..++++   +++|.++.+++++|+++ +++++++.+..         ...+++.|+++++++.++|+..+.
T Consensus       194 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~l~~~~~  264 (361)
T 3ftb_A          194 SSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKA---------KQNPWNINCFAEMAAINCLKDTNY  264 (361)
T ss_dssp             TSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHHT---------TSCTTCSCHHHHHHHHHTSSCHHH
T ss_pred             ccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHHh---------hCCCCCCCHHHHHHHHHHhcCHHH
Confidence            222233333334433   68999873338999998 89999998873         223678899999999988873211


Q ss_pred             -ccHHHHHHHHHHHHHhhhhhccCCCcee-EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---
Q 010250          398 -RNIVEQVNKIAPKFQDGVKAFSDSPIIG-EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---  472 (514)
Q Consensus       398 -~~~~~~~~~~~~~l~~~L~~l~~~~~~~-~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---  472 (514)
                       ++..++++++.+++.+.|+++   +.+. ..++.|.++.+.+...            ....+.+.|.++||++.++   
T Consensus       265 ~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~l~~~gi~v~~g~~~  329 (361)
T 3ftb_A          265 IEESLLWIKKERKRFIEELNKI---GFIKRVFSPHANFVLCRLENI------------SGEKLYDSLLKEDIVIRRCCNF  329 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHS---SSEEEEECCSSSEEEEEESSS------------CHHHHHHHHHTTTEECEECTTS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhC---CCCceecCCCCeEEEEEcCCC------------CHHHHHHHHHHCCeEEeeCccC
Confidence             345666777777888877765   4454 5667788888887541            1456888999999999874   


Q ss_pred             ----CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          473 ----GDNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       473 ----g~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                          .+.+|++++   ++++++++++.|++..+
T Consensus       330 ~~~~~~~iRis~~---~~~~~~~l~~~l~~~~~  359 (361)
T 3ftb_A          330 IGLDDSFVRFAIK---DEKKNTKFLRALKGVEN  359 (361)
T ss_dssp             TTCCTTEEEEECC---CHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEEcC---CHHHHHHHHHHHHHHHh
Confidence                357999954   88899998888887654

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=99.96  E-value=3.6e-29  Score=257.97  Aligned_cols=363  Identities=13%  Similarity=0.040  Sum_probs=232.9

Q ss_pred             eEEEeeeCcEEEeCCCC---EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcCc
Q 010250           84 LVIEKSEGSYVYDVNGK---KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTA  159 (514)
Q Consensus        84 ~~~~~~~G~~~~d~dG~---~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~~  159 (514)
                      .++.+++|.++++.+++   ++|||.+|.. ++++ .+|+|++|+.+++++... .+....+..+...++++++.+.++.
T Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~id~~~g~~-~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~   97 (407)
T 3nra_A           20 EVRQSAAGLEALIRGAPIEGRPVDFSHGDV-DAHE-PTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGA   97 (407)
T ss_dssp             -------CCTTTCCSCCCCSCCEETTSCCT-TTSC-CCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHhhhhHHHhhcCCCCCceeeecCcCC-CCCC-CcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCC
Confidence            35678888887765555   5999998743 2334 689999999999875322 1111123456777888888887642


Q ss_pred             C-CC-CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC
Q 010250          160 S-KM-AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP  237 (514)
Q Consensus       160 ~-~~-~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  237 (514)
                      . .. +++++++||++|++.+++.+.        .++++|++.+++|++........ |........... +     ..+
T Consensus        98 ~~~~~~~i~~~~g~~~a~~~~~~~l~--------~~gd~vl~~~~~~~~~~~~~~~~-g~~~~~~~~~~~-~-----~~~  162 (407)
T 3nra_A           98 PVDARDGLIITPGTQGALFLAVAATV--------ARGDKVAIVQPDYFANRKLVEFF-EGEMVPVQLDYV-S-----ADE  162 (407)
T ss_dssp             CCCTTTSEEEESHHHHHHHHHHHTTC--------CTTCEEEEEESCCTHHHHHHHHT-TCEEEEEEBCCC-S-----SCC
T ss_pred             CCCCCCcEEEeCCcHHHHHHHHHHhC--------CCCCEEEEcCCcccchHHHHHHc-CCEEEEeecccc-c-----ccC
Confidence            1 12 689999999999999998653        34568999999999865333322 211110000000 0     000


Q ss_pred             CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc
Q 010250          238 HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF  317 (514)
Q Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~  317 (514)
                      +.+.             .++++|++.+.+   +..+.+++.| ++++|.+. +.+++++|.++|++||+++|+||+|+++
T Consensus       163 ~~~~-------------~d~~~l~~~l~~---~~~~v~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~Dea~~~~  224 (407)
T 3nra_A          163 TRAG-------------LDLTGLEEAFKA---GARVFLFSNP-NNPAGVVY-SAEEIGQIAALAARYGATVIADQLYSRL  224 (407)
T ss_dssp             SSCC-------------BCHHHHHHHHHT---TCCEEEEESS-CTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTS
T ss_pred             cCCC-------------cCHHHHHHHHhh---CCcEEEEcCC-CCCCCccc-CHHHHHHHHHHHHHcCCEEEEEcccccc
Confidence            1111             125778887763   2334445555 77778655 6788999999999999999999999988


Q ss_pred             ccccccc-eecccC-----CCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHH
Q 010250          318 GRLGTMF-GCDKYS-----IKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEA  391 (514)
Q Consensus       318 gr~G~~~-~~~~~g-----v~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aa  391 (514)
                      ++.|+.+ .....+     ...++.++||.++.+++++|++++++++++.+..       .....+++.++++++++.++
T Consensus       225 ~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~~~  297 (407)
T 3nra_A          225 RYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEK-------LQAIVSLRAAGYSQAVLRGW  297 (407)
T ss_dssp             BCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHH-------HHHHHTSSSCHHHHGGGGGT
T ss_pred             ccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHH-------HHhhhccCCChHHHHHHHHH
Confidence            7777543 233322     2233557899998333899999999999988864       23445777788888887777


Q ss_pred             HHHHh--hccHHHHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCc
Q 010250          392 LKIYK--ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGM  467 (514)
Q Consensus       392 l~~~~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv  467 (514)
                      |+...  -++..++++++.+++.+.|+++   +.+..+.+. |.++.+.+.....          ....+.+.|++ +||
T Consensus       298 l~~~~~~~~~~~~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~gi  364 (407)
T 3nra_A          298 FDEAPGWMEDRIARHQAIRDELLHVLRGC---EGVFARTPQAGSYLFPRLPKLAV----------APAEFVKILRLQAGV  364 (407)
T ss_dssp             TCCCTTHHHHHHHHHHHHHHHHHHHHHTS---TTCBCCCCSBSSEECCBCCCBSS----------CHHHHHHHHHHHHCE
T ss_pred             HhccchHHHHHHHHHHHHHHHHHHHHhcC---CCceeccCCeeEEEEEeCCCCCC----------CHHHHHHHHHHhCCE
Confidence            65211  1234566777777888877765   222222233 3555555543110          14567788865 599


Q ss_pred             EEEee-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          468 LVRVS-------GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       468 ~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ++.++       .+.||++++  .|+++|++++++|+++++++
T Consensus       365 ~v~~g~~~~~~~~~~iRis~~--~~~~~i~~~~~~l~~~~~~~  405 (407)
T 3nra_A          365 VVTPGTEFSPHTADSVRLNFS--QDHEAAVAAARRIVTLVERY  405 (407)
T ss_dssp             ECEEGGGTCTTCTTBEEEECC--SCHHHHHHHHHHHHHHHHHH
T ss_pred             EEeCchhhCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHh
Confidence            99864       257999976  49999999999999998754

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=99.96  E-value=8.5e-28  Score=245.38  Aligned_cols=334  Identities=14%  Similarity=0.079  Sum_probs=224.7

Q ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----CcC-CCC-eEEEeCC
Q 010250           97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----TAS-KMA-KVFFTNS  170 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~~~-~~~-~v~~~~s  170 (514)
                      .+|+++|||.+|..  .+| .+|.+.+|+.+++++... + .+. ......++.+.+++++    +.. ..+ ++++++|
T Consensus        22 ~~g~~~idl~~~~~--~~~-~~~~v~~a~~~~~~~~~~-~-~y~-~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g   95 (376)
T 2dou_A           22 ERGVGLIDLSIGST--DLP-PPEAPLKALAEALNDPTT-Y-GYC-LKSCTLPFLEEAARWYEGRYGVGLDPRREALALIG   95 (376)
T ss_dssp             HTTCCCEECSSCCC--CCC-CCHHHHHHHHHHTTCGGG-S-SCC-CHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESS
T ss_pred             ccCCCEEeccCCCC--CCC-CCHHHHHHHHHHHhCCCc-C-CCC-CCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCC
Confidence            46889999988863  577 589999999999865211 1 111 1123456777776665    321 234 8999999


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250          171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE  250 (514)
Q Consensus       171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (514)
                      |++|++.+++.+.        .++++|++.+++||+........ |....            .++.++.|..        
T Consensus        96 ~~~a~~~~~~~l~--------~~gd~vl~~~p~y~~~~~~~~~~-g~~~~------------~~~~~~~~~~--------  146 (376)
T 2dou_A           96 SQEGLAHLLLALT--------EPEDLLLLPEVAYPSYFGAARVA-SLRTF------------LIPLREDGLA--------  146 (376)
T ss_dssp             HHHHHHHHHHHHC--------CTTCEEEEESSCCHHHHHHHHHT-TCEEE------------EECBCTTSSB--------
T ss_pred             cHHHHHHHHHHhc--------CCCCEEEECCCCcHhHHHHHHHc-CCEEE------------EeeCCCCCCC--------
Confidence            9999999998763        23468999999999976543332 21111            1111111110        


Q ss_pred             HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eeccc
Q 010250          251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKY  329 (514)
Q Consensus       251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~  329 (514)
                           ++++|++.+.    +++++|+++..++++|.+. +.+++++|.++|++||+++|+||+|+++.+.|... .....
T Consensus       147 -----d~~~l~~~l~----~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  216 (376)
T 2dou_A          147 -----DLKAVPEGVW----REAKVLLLNYPNNPTGAVA-DWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALP  216 (376)
T ss_dssp             -----CGGGSCHHHH----HHEEEEEECSSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGST
T ss_pred             -----CHHHHHHhhc----cCceEEEECCCCCCcCccC-CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcC
Confidence                 1355666554    2466777765577778764 67899999999999999999999999887666321 12222


Q ss_pred             ---CCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHH
Q 010250          330 ---SIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQV  404 (514)
Q Consensus       330 ---gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~  404 (514)
                         +...++.++||.++.+++++|++++++++++.+...       ....+++.++++++++.++|+..++  ++..+++
T Consensus       217 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  289 (376)
T 2dou_A          217 GAKERVVELFSLSKSYNLAGFRLGFALGSEEALARLERV-------KGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVY  289 (376)
T ss_dssp             TGGGTEEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHHH-------HHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred             CCCCcEEEEecchhhcCChhheeEEEecCHHHHHHHHHH-------HHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence               222334579999973338999999999999888642       3345667789999998888864211  2345667


Q ss_pred             HHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------CCEE
Q 010250          405 NKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNI  476 (514)
Q Consensus       405 ~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g~~i  476 (514)
                      +++.+++.+.|+++     +..+.+ .|.++++++.+..           ....+.+.|.++||++.++       .+.+
T Consensus       290 ~~~~~~l~~~L~~~-----~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~  353 (376)
T 2dou_A          290 RERALGMAEALKGV-----LSLLPPRATMYLWGRLPEGV-----------DDLEFGLRLVERGVALAPGRGFGPGGKGFV  353 (376)
T ss_dssp             HHHHHHHHHHHTTT-----SEECCCCBSSEEEEECCTTC-----------CHHHHHHHHHHTTEECEEGGGGCGGGTTEE
T ss_pred             HHHHHHHHHHHHHh-----cCccCCCeeEEEEEECCCCC-----------CHHHHHHHHHHCCEEEcCchhhCCCCCCeE
Confidence            77777787777654     112223 3556777775321           1346888999999999874       3579


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          477 MMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       477 Ri~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      ||+++  .++++|++++++|++++
T Consensus       354 Ris~~--~~~~~i~~~l~~l~~~l  375 (376)
T 2dou_A          354 RIALV--RPLEELLEAAKRIREAL  375 (376)
T ss_dssp             EEECC--SCHHHHHHHHHHHHHTC
T ss_pred             EEEec--CCHHHHHHHHHHHHHHh
Confidence            99965  48999999999998764

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=99.96  E-value=6.7e-28  Score=245.59  Aligned_cols=323  Identities=15%  Similarity=0.154  Sum_probs=223.2

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-----cCCCCeEEEeCChh
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-----ASKMAKVFFTNSGS  172 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-----~~~~~~v~~~~sGs  172 (514)
                      +|+.++||.++..  .+|+ +|.+.+++.+++++....+.    ......++.+.+++++.     ..+.+++++++||+
T Consensus        27 ~g~~~i~l~~~~~--~~~~-~~~v~~a~~~~~~~~~~~y~----~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~   99 (370)
T 2z61_A           27 EGKKVIHLEIGEP--DFNT-PKPIVDEGIKSLKEGKTHYT----DSRGILELREKISELYKDKYKADIIPDNIIITGGSS   99 (370)
T ss_dssp             TTCCCEECCCCSC--SSCC-CHHHHHHHHHHHHTTCCSCC----CTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHH
T ss_pred             cCCCEEEccCCCC--CCCC-CHHHHHHHHHHHHcCccCCC----CCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChH
Confidence            4788999988753  5776 89999999999876322111    11123455555555542     13457899999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY  252 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (514)
                      +|++.+++.+.        .++++|++.+++||+........ |...            ..++                 
T Consensus       100 ~a~~~~~~~~~--------~~gd~vl~~~p~~~~~~~~~~~~-g~~~------------~~v~-----------------  141 (370)
T 2z61_A          100 LGLFFALSSII--------DDGDEVLIQNPCYPCYKNFIRFL-GAKP------------VFCD-----------------  141 (370)
T ss_dssp             HHHHHHHHHHC--------CTTCEEEEESSCCTHHHHHHHHT-TCEE------------EEEC-----------------
T ss_pred             HHHHHHHHHhc--------CCCCEEEEeCCCchhHHHHHHHc-CCEE------------EEeC-----------------
Confidence            99999999873        23478999999999976443322 2111            0011                 


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceeccc-CC
Q 010250          253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY-SI  331 (514)
Q Consensus       253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~-gv  331 (514)
                        .+.++|++.+.    +++++|+++.+++++|.+.+    ++ |.++|++||+++|+||+|+++.+.|.......+ +.
T Consensus       142 --~d~~~l~~~l~----~~~~~v~~~~p~nptG~~~~----~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~  210 (370)
T 2z61_A          142 --FTVESLEEALS----DKTKAIIINSPSNPLGEVID----RE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDEN  210 (370)
T ss_dssp             --SSHHHHHHHCC----SSEEEEEEESSCTTTCCCCC----HH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTT
T ss_pred             --CCHHHHHHhcc----cCceEEEEcCCCCCcCcccC----HH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCC
Confidence              01467777664    35677777777888898877    45 999999999999999999988666643333222 11


Q ss_pred             -CCch--hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH-Hhh--ccHHHHHH
Q 010250          332 -KPDL--VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI-YKE--RNIVEQVN  405 (514)
Q Consensus       332 -~pDi--v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~-~~~--~~~~~~~~  405 (514)
                       ..|+  .+++|.++.+++++|++++++++++.+..       ..+..+++.++++++++.++|+. .++  +++.++++
T Consensus       211 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  283 (370)
T 2z61_A          211 LEKTILINGFSKLYAMTGWRIGYVISNDEIIEAILK-------LQQNLFISAPTISQYAALKAFEKETEREINSMIKEFD  283 (370)
T ss_dssp             CSSEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHH-------HHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHH
T ss_pred             CCcEEEEecChhccCCccceEEEEEECHHHHHHHHH-------HHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence             2243  37899997333899999999999988863       23445778899999999888875 222  34677888


Q ss_pred             HHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEE
Q 010250          406 KIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIM  477 (514)
Q Consensus       406 ~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iR  477 (514)
                      ++.+++.+.|+++ ......  ...|.++++++.. .            ...+.+.|+ ++||.+.++       .+.+|
T Consensus       284 ~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~~-~------------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~R  347 (370)
T 2z61_A          284 RRRRLVLKYVKDF-GWEVNN--PIGAYYVFPNIGE-D------------GREFAYKLLKEKFVALTPGIGFGSKGKNYIR  347 (370)
T ss_dssp             HHHHHHHHHHHHT-TCBCCC--CCBTTEECCBCSS-C------------HHHHHHHHHHHHCEECEEGGGGCGGGSSBEE
T ss_pred             HHHHHHHHHHHHc-CCeecC--CCcceEEEEecCC-C------------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEE
Confidence            8899999999876 322221  1124445555532 1            345778887 789999874       35799


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      ++++  +++++|++++++|+++++
T Consensus       348 i~~~--~~~~~i~~~~~~l~~~l~  369 (370)
T 2z61_A          348 ISYA--NSYENIKEGLERIKEFLN  369 (370)
T ss_dssp             EECC--SCHHHHHHHHHHHHHHHC
T ss_pred             EEEe--CCHHHHHHHHHHHHHHHh
Confidence            9977  799999999999998764

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=99.96  E-value=1.3e-27  Score=244.87  Aligned_cols=342  Identities=11%  Similarity=0.060  Sum_probs=229.0

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCCeEEEeCChhHHHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEAND  176 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~~v~~~~sGseA~~  176 (514)
                      +|+.++||.+|..  .+| .+|.+.+++.+++++....+....+..+....+++.+.+.++. .+.+++++++||++|++
T Consensus        28 ~g~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~  104 (388)
T 1j32_A           28 EGIDVCSFSAGEP--DFN-TPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIF  104 (388)
T ss_dssp             TTCCCEECCCSSC--SSC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred             cCCCEEECCCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHH
Confidence            6889999988853  466 5899999999998653211111111233344444444443321 24578999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCCCCChhHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGETEEEYST  254 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  254 (514)
                      .+++.++        .++++|++.+++||+...... ..|...            ..++...  .|.             
T Consensus       105 ~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~-~~g~~~------------~~v~~~~~~~~~-------------  150 (388)
T 1j32_A          105 NLMLAMI--------EPGDEVIIPAPFWVSYPEMVK-LAEGTP------------VILPTTVETQFK-------------  150 (388)
T ss_dssp             HHHHHHC--------CTTCEEEEESSCCTHHHHHHH-HTTCEE------------EEECCCGGGTTC-------------
T ss_pred             HHHHHhc--------CCCCEEEEcCCCChhHHHHHH-HcCCEE------------EEecCCcccCCC-------------
Confidence            9999873        234689999999998754322 222111            1111110  010             


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc----eec--c
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF----GCD--K  328 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~----~~~--~  328 (514)
                      .+.++|++.+.    +++++|+++++++++|.+. +++.+++|.++|++||+++|+||+|+++.+.|..+    ...  .
T Consensus       151 ~d~~~l~~~l~----~~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  225 (388)
T 1j32_A          151 VSPEQIRQAIT----PKTKLLVFNTPSNPTGMVY-TPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEA  225 (388)
T ss_dssp             CCHHHHHHHCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHH
T ss_pred             CCHHHHHHhcC----cCceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccc
Confidence            11467776664    3577788777788888775 56899999999999999999999999887666421    111  1


Q ss_pred             cCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHH
Q 010250          329 YSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNK  406 (514)
Q Consensus       329 ~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~  406 (514)
                      ++..+++.+++|.++.+++++|++++++++++.+..       ....++++.+++++.++.++|+...+  +++.+++++
T Consensus       226 ~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~  298 (388)
T 1j32_A          226 YERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAATK-------IQGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAE  298 (388)
T ss_dssp             HHTEEEEEESTTTTTCTTTCCEEEECCHHHHHHHHH-------HHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHH
T ss_pred             cCCEEEEeechhccCCcccceEEEEeCHHHHHHHHH-------HHhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence            334455668999997333899999999999888863       23446788889999988888873221  345677888


Q ss_pred             HHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-----CCEEEEe
Q 010250          407 IAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-----GDNIMMS  479 (514)
Q Consensus       407 ~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-----g~~iRi~  479 (514)
                      +++++.+.|+++....+.   .+. |.+.++.+....  .        ....+.+.|.+ +||.+.++     .+.+|++
T Consensus       299 ~~~~l~~~L~~~~g~~~~---~~~~~~~~~~~~~~~~--~--------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis  365 (388)
T 1j32_A          299 RRRYMLDALNAMPGLECP---KPDGAFYMFPSIAKTG--R--------SSLDFCSELLDQHQVATVPGAAFGADDCIRLS  365 (388)
T ss_dssp             HHHHHHHHHHTCTTCBCC---CCCBTTEECCBCGGGT--C--------CHHHHHHHHHHHHCEECEEGGGGTCTTBEEEE
T ss_pred             HHHHHHHHHhhCCCCccc---CCCeeEEEEEecCCCC--C--------CHHHHHHHHHHhCCEEEeChhhhCCCCcEEEE
Confidence            888898888775322221   222 333444443210  0        14567788876 79999875     3679999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ++  +++++|++++++|+++++++
T Consensus       366 ~~--~~~~~i~~~~~~l~~~l~~~  387 (388)
T 1j32_A          366 YA--TDLDTIKRGMERLEKFLHGI  387 (388)
T ss_dssp             CC--SCHHHHHHHHHHHHHHHHHH
T ss_pred             ec--CCHHHHHHHHHHHHHHHHHh
Confidence            65  79999999999999988654

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=99.96  E-value=4.7e-27  Score=241.98  Aligned_cols=334  Identities=17%  Similarity=0.174  Sum_probs=229.7

Q ss_pred             CCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250           98 NGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE  173 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse  173 (514)
                      ||++|+||.++   .++|+ .+|+|.+|+.+++++....   +....+..+...+++++|+++++.   +..++.++|++
T Consensus        44 ~g~~~i~~~~~---~~~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~---~~~i~~~sG~~  117 (401)
T 2bwn_A           44 GKQDITVWCGN---DYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQK---EAALVFSSAYN  117 (401)
T ss_dssp             CEEEEEECSCS---CTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTC---SEEEEESCHHH
T ss_pred             CCCcEEEeeCC---CcccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCC---CcEEEECCcHH
Confidence            68999999886   45565 3789999999998763221   112223456778999999999842   34555588888


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS  253 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (514)
                      ++..+++++...      .+++.|++.++.|++.. ..+...|...            ..++..                
T Consensus       118 a~~~~~~~l~~~------~~gd~Vl~~~~~~~~~~-~~~~~~g~~~------------~~v~~~----------------  162 (401)
T 2bwn_A          118 ANDATLSTLRVL------FPGLIIYSDSLNHASMI-EGIKRNAGPK------------RIFRHN----------------  162 (401)
T ss_dssp             HHHHHHHHHHHH------STTCEEEEETTCCHHHH-HHHHHSCCCE------------EEECTT----------------
T ss_pred             HHHHHHHHHhcC------CCCCEEEECchhhHHHH-HHHHHcCCeE------------EEEcCC----------------
Confidence            999998864311      12356766665555433 2222222211            111110                


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-C-cccccccceecccCC
Q 010250          254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-A-FGRLGTMFGCDKYSI  331 (514)
Q Consensus       254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G-~gr~G~~~~~~~~gv  331 (514)
                        +.++|++++.+..++++++|+++++++++|.+.|    +++|.++|++||+++|+||+|+ | ||+.|..+. ..+++
T Consensus       163 --d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~-~~~~~  235 (401)
T 2bwn_A          163 --DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGP----IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVA-ERDGL  235 (401)
T ss_dssp             --CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHH-HHHTC
T ss_pred             --CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCC----HHHHHHHHHHcCCEEEEeccccccccCCCCceee-eccCc
Confidence              1578888887654346789999999999999887    9999999999999999999999 3 466665443 44554


Q ss_pred             --CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHH
Q 010250          332 --KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQV  404 (514)
Q Consensus       332 --~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~  404 (514)
                        .+|++  ++||+++..   -|++++++++++.+....   ..  ..++.+.++++++++.++++.+++   +++.+++
T Consensus       236 ~~~~~i~~~s~sK~~~~~---GG~~~~~~~~~~~l~~~~---~~--~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~  307 (401)
T 2bwn_A          236 MHRIDIFNGTLAKAYGVF---GGYIAASARMVDAVRSYA---PG--FIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQ  307 (401)
T ss_dssp             GGGCSEEEEESSSTTCSC---CEEEEECHHHHHHHHHHC---HH--HHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred             cccCcEEEeechhhccCC---CCEEecCHHHHHHHHHhC---cC--ceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHH
Confidence              24554  799999852   278888999888876311   01  112334467888889999998865   3678889


Q ss_pred             HHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------C-CE
Q 010250          405 NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------G-DN  475 (514)
Q Consensus       405 ~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g-~~  475 (514)
                      +++++++.+.|+++ ...+..   ..|.++.+.+.+..           ....+.+.|+ ++||.+.+.       + +.
T Consensus       308 ~~~~~~l~~~L~~~-g~~~~~---~~~~~~~~~~~~~~-----------~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~  372 (401)
T 2bwn_A          308 QMHAKVLKMRLKAL-GMPIID---HGSHIVPVVIGDPV-----------HTKAVSDMLLSDYGVYVQPINFPTVPRGTER  372 (401)
T ss_dssp             HHHHHHHHHHHHHH-TCCBCC---CSSSCEEEECCCHH-----------HHHHHHHHHHHHHCEECCEECTTTSCTTCCE
T ss_pred             HHHHHHHHHHHHHC-CCcccC---CCCCeEEEEeCChH-----------HHHHHHHHHHhcCCEEEeecCCCCCCCCCce
Confidence            99999999999886 433332   23457777764210           2456778886 789999764       2 47


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +|++++..+|++|+++++++|++++++
T Consensus       373 iRis~~~~~t~~~i~~~~~~l~~~~~~  399 (401)
T 2bwn_A          373 LRFTPSPVHDLKQIDGLVHAMDLLWAR  399 (401)
T ss_dssp             EEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred             EEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence            999999989999999999999988754

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=99.96  E-value=2e-28  Score=251.62  Aligned_cols=352  Identities=11%  Similarity=0.031  Sum_probs=236.4

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc--
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA--  159 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~--  159 (514)
                      .|+....+.+.+++|.+|+++|||.+|.  ..++ .+|.|.+|+.++++....|... .+..+....+++.+.+.++.  
T Consensus        12 ~~~~~~~~~~~~~~~~~g~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~y~~~-~g~~~lr~~la~~l~~~~g~~~   87 (396)
T 3jtx_A           12 YPFARLHEAMQGISAPEGMEAVPLHIGE--PKHP-TPKVITDALTASLHELEKYPLT-AGLPELRQACANWLKRRYDGLT   87 (396)
T ss_dssp             CHHHHHHHHTTTCCCCTTCCCEECSCCS--CCSC-CCHHHHHHHHHTGGGGGSCCCT-TCCHHHHHHHHHHHHHHTTTCC
T ss_pred             ChHHHHHHHHHhhhhccCCCeEEeCCcC--CCCC-CCHHHHHHHHHHhhhccCCCCC-CCcHHHHHHHHHHHHHhcCCCC
Confidence            3344446677778899999999999886  3455 6899999999988654333211 22345556667776665532  


Q ss_pred             CCCC-eEEEeCChhHHHHHHHHHHHHHHhhcCCCC----ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCccccc
Q 010250          160 SKMA-KVFFTNSGSEANDTQVKLVWYYNNALGRPN----KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHT  234 (514)
Q Consensus       160 ~~~~-~v~~~~sGseA~~~Alk~a~~~~~~~~~~~----~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~  234 (514)
                      .+.+ ++++++||++|++.+++.+.       .++    +++|++.+++||+........+....             .+
T Consensus        88 ~~~~~~i~~t~g~~~al~~~~~~~~-------~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~-------------~v  147 (396)
T 3jtx_A           88 VDADNEILPVLGSREALFSFVQTVL-------NPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIH-------------FA  147 (396)
T ss_dssp             CCTTTSEEEESSHHHHHHHHHHHHC-------CC---CCCCEEEEEESCCHHHHHHHHHTTCEEE-------------EE
T ss_pred             CCCCCeEEEcCCcHHHHHHHHHHHh-------CCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEE-------------Ee
Confidence            2356 89999999999999998873       132    26899999999987654333222111             01


Q ss_pred             CC-CCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEech
Q 010250          235 DC-PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV  313 (514)
Q Consensus       235 ~~-~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv  313 (514)
                      +. ++.|..             ++++|++.+..    ++++|+++..++++|.+. +.+.+++|.++|++||+++|+||+
T Consensus       148 ~~~~~g~~~-------------d~~~l~~~~~~----~~~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~  209 (396)
T 3jtx_A          148 NCPAPSFNP-------------DWRSISEEVWK----RTKLVFVCSPNNPSGSVL-DLDGWKEVFDLQDKYGFIIASDEC  209 (396)
T ss_dssp             ECCTTTCCC-------------CGGGSCHHHHH----TEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHCCEEEEECT
T ss_pred             ecCCCCCcc-------------CHHHHHHhhcc----CcEEEEEECCCCCCCCcC-CHHHHHHHHHHHHHcCCEEEEEcc
Confidence            11 000100             13556666653    455666655577778765 456799999999999999999999


Q ss_pred             hcCccccc-ccceec--------ccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHH
Q 010250          314 ICAFGRLG-TMFGCD--------KYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS  384 (514)
Q Consensus       314 ~tG~gr~G-~~~~~~--------~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~  384 (514)
                      |++|.+.| ......        .++...++.++||.++.+++++|++++++++++.+..       ..+..+++.++++
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~  282 (396)
T 3jtx_A          210 YSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFVAGDAELLKNFLL-------YRTYHGSAMSIPV  282 (396)
T ss_dssp             TTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEEEECHHHHHHHHH-------HHHHHTCCCCHHH
T ss_pred             ccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEEEeCHHHHHHHHH-------HHhhcccCCCHHH
Confidence            99988777 333221        1344455668999876544899999999999988864       2344577889999


Q ss_pred             HHHHHHHHHHHh-hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH
Q 010250          385 CAVAIEALKIYK-ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE  463 (514)
Q Consensus       385 ~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~  463 (514)
                      ++++.++|+..+ -++..++++++.+.+.+.|+++  .+..  ....|.++++.+....            ...+...|+
T Consensus       283 ~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~--~~~~~~~~~~~~~~~~------------~~~~~~~l~  346 (396)
T 3jtx_A          283 QRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQV--FDVK--LPDASFYIWLKVPDGD------------DLAFARNLW  346 (396)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTT--SCCC--CCSSSSEEEEECTTSC------------HHHHHHHHH
T ss_pred             HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc--CCcc--CCCeeEEEEEECCCCC------------HHHHHHHHH
Confidence            999988886311 1234566677777777777654  1111  1223667777775411            345777775


Q ss_pred             -HCCcEEEee-------------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          464 -KHGMLVRVS-------------GDNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       464 -~~Gv~~~~~-------------g~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                       ++||++.++             .+.|||++.  .++++|++++++|++++
T Consensus       347 ~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~--~~~~~i~~~l~~l~~~l  395 (396)
T 3jtx_A          347 QKAAIQVLPGRFLARDTEQGNPGEGYVRIALV--ADVATCVKAAEDIVSLY  395 (396)
T ss_dssp             HHHCEECEEGGGGCCCCTTCCTTTTEEEEECC--SCHHHHHHHHHHHHHHC
T ss_pred             HHCCEEEeCChHhCCcccccCCCCCeEEEEEc--CCHHHHHHHHHHHHHHh
Confidence             569999763             257999954  49999999999998764

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=99.92  E-value=8.7e-31  Score=269.31  Aligned_cols=357  Identities=10%  Similarity=0.055  Sum_probs=232.6

Q ss_pred             CeEEEeeeCcEEEeCCCC--EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-c
Q 010250           83 PLVIEKSEGSYVYDVNGK--KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-A  159 (514)
Q Consensus        83 p~~~~~~~G~~~~d~dG~--~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~  159 (514)
                      +++..+++|+++||.+|+  .+|||.++.  ..++ .+|++.+|+.+++++....+..  ...+....+++++.+.++ .
T Consensus        12 ~~~~~~~~g~~~~d~~g~~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~y~~--~~~~l~~~la~~l~~~~g~~   86 (392)
T 3b1d_A           12 TAPNRLSHHTYKWKETETDPQLLPAWIAD--MDFE-VMPEVKQAIHDYAEQLVYGYTY--ASDELLQAVLDWEKSEHQYS   86 (392)
Confidence            345677999999999999  999997774  2455 5899999999998653221111  122333344444443332 1


Q ss_pred             CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250          160 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY  239 (514)
Q Consensus       160 ~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  239 (514)
                      .+.++|++++||++|++.+++.+.        .++++|++.+++||+........+....             .++..+ 
T Consensus        87 ~~~~~v~~~~g~~~a~~~~~~~~~--------~~gd~vl~~~p~~~~~~~~~~~~g~~~~-------------~~~~~~-  144 (392)
T 3b1d_A           87 FDKEDIVFVEGVVPAISIAIQAFT--------KEGEAVLINSPVYPPFARSVRLNNRKLV-------------SNSLKE-  144 (392)
Confidence            345789999999999999999874        2346899999999998654433221110             011100 


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                             + ...| ..++++|++.+.+   .++++|+++..++++|.+ ++++++++|+++|++||+++|+||+|++|++
T Consensus       145 -------~-~g~~-~~d~~~l~~~l~~---~~~~~v~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~  211 (392)
T 3b1d_A          145 -------E-NGLF-QIDFEQLENDIVE---NDVKLYLLCNPHNPGGRV-WEREVLEQIGHLCQKHHVILVSDEIHQDLTL  211 (392)
Confidence                   0 0000 1234667666642   245667777777778876 4567899999999999999999999999977


Q ss_pred             cccc----ceecc--cCCCCchhchhhhhc-CCcccceeEEeCH-HHHHHhhhccCCCCcccccCCC-CCcHHHHHHHHH
Q 010250          320 LGTM----FGCDK--YSIKPDLVSFAKALS-SAYMPIGAILVSP-EVSEVIHSQSNTLGSFSHGFTY-SGHPVSCAVAIE  390 (514)
Q Consensus       320 ~G~~----~~~~~--~gv~pDiv~~sK~l~-gG~~pig~v~~~~-~i~~~l~~~~~~~~~~~~~~t~-~~~pl~~aaa~a  390 (514)
                      .|..    +....  .+..+++.++||+++ +| +|+|++++++ ++++.+...       ....++ +.++++++++.+
T Consensus       212 ~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~  283 (392)
T 3b1d_A          212 FGHEHVSFNTVSPDFKDFALVLSSATKTFNIAG-TKNSYAIIENPTLCAQFKHQ-------QLVNNHHEVSSLGYIATET  283 (392)
Confidence            7632    22222  344466778999998 45 8999999875 588877631       222333 468899999988


Q ss_pred             HHHHHhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeE-EEEEccCCCCCCCCCCccchHHHHHHHHH-HCC
Q 010250          391 ALKIYKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLIL-GTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHG  466 (514)
Q Consensus       391 al~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~G  466 (514)
                      +|+..++  ++..++++++.+++.+.|++.  .+.+..+++.|.++ ++++.....          ....+.+.|+ ++|
T Consensus       284 ~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~i~~~~~~~----------~~~~l~~~l~~~~g  351 (392)
T 3b1d_A          284 AYRYGKPWLVALKAVLEENIQFAVEYFAQE--APRLKVMKPQGTYLIWLDFSDYGL----------TDDALFTLLHDQAK  351 (392)
Confidence            8874221  234555666666666666541  23334445566655 466643110          0234667786 789


Q ss_pred             cEEEee-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          467 MLVRVS-------GDNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       467 v~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      |++.++       .+.+||+  +..++++|++++++|+++++
T Consensus       352 i~v~~g~~f~~~~~~~iRi~--~~~~~e~i~~~l~~l~~~l~  391 (392)
T 3b1d_A          352 VILNRGSDYGSEGELHARLN--IAAPKSLVEEICKRIVCCLP  391 (392)
Confidence            999864       2469999  55678999999999998874

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=99.96  E-value=2.1e-27  Score=243.85  Aligned_cols=340  Identities=13%  Similarity=0.136  Sum_probs=220.9

Q ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHH
Q 010250           97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEAN  175 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~  175 (514)
                      .+|++||||.+|.  ..++. +|+|++++.+++++....+....+..+....+++.+.+.++ +.+.++|++++||++|+
T Consensus        28 ~~g~~~i~l~~g~--~~~~~-~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al  104 (391)
T 3h14_A           28 EAGRRIIHMEVGQ--PGTGA-PRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGF  104 (391)
T ss_dssp             HTTCCCEECCCSS--CSSCS-CHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHH
T ss_pred             hcCCCeEEccCCC--CCCCC-CHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHH
Confidence            4789999999886  34553 88999999999875322111111122333444444443332 13567999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      +.+++.+.        ..+++|++.+++|++........ |...            ..++......+.           .
T Consensus       105 ~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~-g~~~------------~~v~~~~~~~~~-----------~  152 (391)
T 3h14_A          105 LLAFTALF--------DSGDRVGIGAPGYPSYRQILRAL-GLVP------------VDLPTAPENRLQ-----------P  152 (391)
T ss_dssp             HHHHHHHC--------CTTCEEEEEESCCHHHHHHHHHT-TCEE------------EEEECCGGGTTS-----------C
T ss_pred             HHHHHHhc--------CCCCEEEEcCCCCccHHHHHHHc-CCEE------------EEeecCcccCCC-----------C
Confidence            99998773        23478999999999875333222 2111            011111000000           0


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL  335 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi  335 (514)
                      ++++|++.       ++++|+++..++++|.+. +.+.+++|.++|++||+++|+||+|++|.+.|.......  ..+++
T Consensus       153 d~~~l~~~-------~~~~v~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~--~~~~~  222 (391)
T 3h14_A          153 VPADFAGL-------DLAGLMVASPANPTGTML-DHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALE--LTDEC  222 (391)
T ss_dssp             CHHHHTTS-------CCSEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGG--TCSSS
T ss_pred             CHHHHHhc-------CCeEEEECCCCCCCCccC-CHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhh--cCCCE
Confidence            13444432       345666666677888765 557799999999999999999999999877765322222  23343


Q ss_pred             h---chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHH
Q 010250          336 V---SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPK  410 (514)
Q Consensus       336 v---~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~  410 (514)
                      +   ++||.++ .| +++|++++++++++.+..       .....+++.++++++++.++++..+ -++..++++++.++
T Consensus       223 i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  294 (391)
T 3h14_A          223 YVINSFSKYFSMTG-WRVGWMVVPEDQVRVVER-------IAQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKL  294 (391)
T ss_dssp             EEEEESSSTTCCTT-SCCEEEECCGGGHHHHHH-------HHHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEechhccCCcc-ceeEEEEeCHHHHHHHHH-------HHhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHH
Confidence            3   7899997 55 899999999999888863       2345677889999999888887111 12456677778888


Q ss_pred             HHhhhhhccCCCceeEEEeee-eeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee--------CCEEEEeC
Q 010250          411 FQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS--------GDNIMMSP  480 (514)
Q Consensus       411 l~~~L~~l~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~--------g~~iRi~p  480 (514)
                      +.+.|+++   +....+++.| .++.+.+.....          ....+.+.|+++ ||++.++        .+.||+++
T Consensus       295 l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~  361 (391)
T 3h14_A          295 MLERLPKA---GFTRIAPPDGAFYVYADVSDLTD----------DSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSY  361 (391)
T ss_dssp             HHHHHHHH---TCCCBCCCCBTTEEEEECTTTCS----------CHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEEC
T ss_pred             HHHHHHHc---CCCcccCCCeeEEEEEecCccCC----------CHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEe
Confidence            88888776   2222223333 556666653111          145677887775 9999863        24799996


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          481 PFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       481 ~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      +.  ++++|++++++|++++++..
T Consensus       362 ~~--~~~~i~~~l~~l~~~~~~~~  383 (391)
T 3h14_A          362 AR--ATADIEEGLDRLEAFMQARG  383 (391)
T ss_dssp             CS--CHHHHHHHHHHHHHHHHHC-
T ss_pred             cC--CHHHHHHHHHHHHHHHHHhc
Confidence            54  89999999999999887544

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=99.96  E-value=4.8e-28  Score=249.17  Aligned_cols=343  Identities=15%  Similarity=0.101  Sum_probs=234.6

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ  178 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A  178 (514)
                      ++++|||.+|.. ...||.+|++.+++.+++++.......+. ......++.+.++++++ .+.++|++++||++|++.+
T Consensus        31 ~~~~i~l~~g~~-~~~~~~~~~v~~a~~~~~~~~~~~~~~y~-~~~~~~~l~~~la~~~g-~~~~~v~~~~g~~~al~~~  107 (397)
T 2zyj_A           31 RPGILSFAGGLP-APELFPKEEAAEAAARILREKGEVALQYS-PTEGYAPLRAFVAEWIG-VRPEEVLITTGSQQALDLV  107 (397)
T ss_dssp             STTCEEESSCCC-CGGGCCHHHHHHHHHHHHHHHHHHHTSCC-CTTCCHHHHHHHHHHHT-SCGGGEEEESHHHHHHHHH
T ss_pred             CCCceecCCCCC-CchhCCHHHHHHHHHHHHHhcchhhhCCC-CCCCCHHHHHHHHHHhC-CChhhEEEeccHHHHHHHH
Confidence            456899988865 44688999999999999875211000111 22345788888888874 4457899999999999999


Q ss_pred             HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250          179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN  258 (514)
Q Consensus       179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (514)
                      ++.+.        .++++|++.+++||+........ |....            .++...           +   ..+++
T Consensus       108 ~~~~~--------~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~------------~~~~~~-----------~---~~d~~  152 (397)
T 2zyj_A          108 GKVFL--------DEGSPVLLEAPSYMGAIQAFRLQ-GPRFL------------TVPAGE-----------E---GPDLD  152 (397)
T ss_dssp             HHHHC--------CTTCEEEEEESCCHHHHHHHHTT-CCEEE------------EEEEET-----------T---EECHH
T ss_pred             HHHhC--------CCCCEEEEeCCCcHHHHHHHHHc-CCEEE------------ecCcCC-----------C---CCCHH
Confidence            98763        23468999999999976443322 21110            111100           0   01257


Q ss_pred             HHHHHHHHhCCCcEEEE-EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceecccCCC---C
Q 010250          259 NLEDLILKEGPETIAAF-IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDKYSIK---P  333 (514)
Q Consensus       259 ~le~li~~~~~~~~aav-ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~~gv~---p  333 (514)
                      +|++.+.+.   ++++| ++...++.+|.+. +.+++++|.++|++||+++|+||+|+++++.|.. .....++..   +
T Consensus       153 ~l~~~l~~~---~~~~v~~~~~~~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~  228 (397)
T 2zyj_A          153 ALEEVLKRE---RPRFLYLIPSFQNPTGGLT-PLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYP  228 (397)
T ss_dssp             HHHHHHHHC---CCSCEEECCBSCTTTCCBC-CHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCC
T ss_pred             HHHHHHhhc---CCeEEEECCCCcCCCCCcC-CHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCC
Confidence            888887642   34555 4555677778764 6789999999999999999999999998776653 222223222   2


Q ss_pred             c---hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh---hccHHHHHHHH
Q 010250          334 D---LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK---ERNIVEQVNKI  407 (514)
Q Consensus       334 D---iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~---~~~~~~~~~~~  407 (514)
                      +   +.+++|.++.| +++|++++++++++.+...       .+..+++.++++++++.++|+...   -++..++++++
T Consensus       229 ~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  300 (397)
T 2zyj_A          229 GVIYLGSFSKVLSPG-LRVAFAVAHPEALQKLVQA-------KQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREK  300 (397)
T ss_dssp             CEEEEEESTTTTCGG-GCCEEEECCHHHHHHHHHH-------HHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHH
T ss_pred             eEEEEeccccccccc-ceeEEEecCHHHHHHHHHH-------HHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence            2   44789999955 8999999999998888631       233456678999998888886421   12345666777


Q ss_pred             HHHHHhhhhhc-cCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------CCEE
Q 010250          408 APKFQDGVKAF-SDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---------GDNI  476 (514)
Q Consensus       408 ~~~l~~~L~~l-~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------g~~i  476 (514)
                      .+++.+.|++. ..  .+..+ ...|.++++++....           ....+.+.|.++||++.++         .+.+
T Consensus       301 ~~~l~~~L~~~~~~--g~~~~~~~~g~~~~~~~~~~~-----------~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~i  367 (397)
T 2zyj_A          301 AQAMLHALDREVPK--EVRYTRPKGGMFVWMELPKGL-----------SAEGLFRRALEENVAFVPGGPFFANGGGENTL  367 (397)
T ss_dssp             HHHHHHHHHHHSCT--TSEECCCSBSSEEEEECSTTC-----------CHHHHHHHHHHTTEEEEESGGGCTTSCCTTEE
T ss_pred             HHHHHHHHHHHCCC--CeEEccCCccEEEEEEcCCCC-----------CHHHHHHHHHHCCCEEechHHhcCCCCCCCeE
Confidence            77788877753 21  12211 234677788875311           1456888999999999863         3579


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          477 MMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       477 Ri~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      ||+++.. |+++|++++++|+++++++.+
T Consensus       368 Ris~~~~-~~~~i~~~~~~l~~~l~~~~~  395 (397)
T 2zyj_A          368 RLSYATL-DREGIAEGVRRLGRALKGLLA  395 (397)
T ss_dssp             EEECSSS-CHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEcCCC-CHHHHHHHHHHHHHHHHHHHh
Confidence            9998764 899999999999999977653

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=99.95  E-value=4.7e-27  Score=238.96  Aligned_cols=327  Identities=13%  Similarity=0.079  Sum_probs=231.2

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ  178 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A  178 (514)
                      .+.+|||.++.  +.++ .+|+|++|+.+++.+....    ..+.....++++.++++++....++++|++||++|++.+
T Consensus        29 ~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~----~y~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~  101 (367)
T 3euc_A           29 SHGLVKLDAME--NPYR-LPPALRSELAARLGEVALN----RYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISML  101 (367)
T ss_dssp             CTTCEECCSSC--CCCC-CCHHHHHHHHHHHHHHHTT----CSCCCCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHH
T ss_pred             CCCeeEccCCC--CCCC-CCHHHHHHHHHHhhhhhhh----cCCCCcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHH
Confidence            36789998875  4455 7899999999998742110    112234678999999988432457999999999999999


Q ss_pred             HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250          179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN  258 (514)
Q Consensus       179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (514)
                      ++.+.        ..+++|++.+++|++........+.. .            ..++....|.             .+++
T Consensus       102 ~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~g~~-~------------~~v~~~~~~~-------------~d~~  147 (367)
T 3euc_A          102 ALAAA--------RPGAKVMAPVPGFVMYAMSAQFAGLE-F------------VGVPLRADFT-------------LDRG  147 (367)
T ss_dssp             HHHTC--------CTTCEEEEEESCSCCSCHHHHTTTCE-E------------EEEECCTTSC-------------CCHH
T ss_pred             HHHHc--------CCCCEEEEcCCCHHHHHHHHHHcCCe-E------------EEecCCCCCC-------------CCHH
Confidence            98763        23468999999999875443322211 1            1111111111             1157


Q ss_pred             HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc--CCEEEEechhcCcccccccceecccCCCCchh
Q 010250          259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY--DILFIADEVICAFGRLGTMFGCDKYSIKPDLV  336 (514)
Q Consensus       259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~--gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv  336 (514)
                      +|++.+...   ++++|+++..++++|.+. +.+.+++|.++|++|  |+++|+||+|++|+..+.....+.++...++.
T Consensus       148 ~l~~~l~~~---~~~~v~~~~~~nptG~~~-~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~  223 (367)
T 3euc_A          148 AMLAAMAEH---QPAIVYLAYPNNPTGNLF-DAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMR  223 (367)
T ss_dssp             HHHHHHHHH---CCSEEEEESSCTTTCCCC-CHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEE
T ss_pred             HHHHHhhcc---CCCEEEEcCCCCCCCCCC-CHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEe
Confidence            788887642   345677777788888765 567799999999999  99999999999886544333334444445566


Q ss_pred             chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHhhh
Q 010250          337 SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQDGV  415 (514)
Q Consensus       337 ~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L  415 (514)
                      ++||. +.+++++|++++++++++.+...         ..+++.++++++++.++|+..+. ++..++++++.+++.+.|
T Consensus       224 s~sK~-~~~G~r~G~~~~~~~~~~~~~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l  293 (367)
T 3euc_A          224 TVSKL-GLAGIRLGYVAGDPQWLEQLDKV---------RPPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGM  293 (367)
T ss_dssp             ECCCT-TSCSCCEEEEEECHHHHHHHGGG---------CCSSCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhh-cccccCceeeeeCHHHHHHHHHh---------CCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            89998 44348999999999999888642         23677899999999999876221 345677778888888888


Q ss_pred             hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-------CEEEEeCCCCCCHHH
Q 010250          416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------DNIMMSPPFIMSPEE  488 (514)
Q Consensus       416 ~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-------~~iRi~p~~~~t~e~  488 (514)
                      +++   +.+....+.|.++.+.+.  .            ...+.+.|.++||++.++.       +.||++..   |++|
T Consensus       294 ~~~---~g~~~~~~~~~~~~~~~~--~------------~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~~---~~~~  353 (367)
T 3euc_A          294 AAH---GGVTVFPSAANFLLARVP--D------------AAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVS---TPEE  353 (367)
T ss_dssp             HTS---TTCEECCCSSSEEEEECS--C------------HHHHHHHHHTTTEECEECGGGCGGGTTEEEEECC---CHHH
T ss_pred             HhC---CCcEECCCCCeEEEEECC--C------------HHHHHHHHHHCCeEEEECCccCCCCCCEEEEecC---CHHH
Confidence            765   333334556777777764  1            3457788999999998642       57999943   9999


Q ss_pred             HHHHHHHHHHHH
Q 010250          489 VDELISKYGKAL  500 (514)
Q Consensus       489 id~~~~~l~~~l  500 (514)
                      +++++++|++++
T Consensus       354 i~~~~~~l~~~l  365 (367)
T 3euc_A          354 NAQFLEAFAASL  365 (367)
T ss_dssp             HHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHh
Confidence            999999998876

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.95  E-value=2.3e-27  Score=246.50  Aligned_cols=350  Identities=15%  Similarity=0.134  Sum_probs=232.9

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----Cc--CCCCeEEEeCChh
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----TA--SKMAKVFFTNSGS  172 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~~--~~~~~v~~~~sGs  172 (514)
                      ++.+|||.+|.. ...||.+|+|.+++.++++........+. ......++.+.+++++    +.  .+.+++++++||+
T Consensus        42 ~~~~idl~~g~~-~~~~~~~~~v~~a~~~~~~~~~~~~~~y~-~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~  119 (425)
T 1vp4_A           42 DKDAISFGGGVP-DPETFPRKELAEIAKEIIEKEYHYTLQYS-TTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQ  119 (425)
T ss_dssp             STTCEECCCCSC-CGGGSCHHHHHHHHHHHHHHSHHHHTSCC-CTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHH
T ss_pred             CCCceeCCCCCC-CcccCCHHHHHHHHHHHHhhcchhhcCCC-CCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHH
Confidence            456899998875 34588999999999999875310000011 1112344445555444    31  3457899999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY  252 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (514)
                      +|++.+++.+.        .++++|++.+++||+........ |....            .++...           +  
T Consensus       120 ~al~~~~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~------------~v~~~~-----------~--  165 (425)
T 1vp4_A          120 QALDLIGKLFL--------DDESYCVLDDPAYLGAINAFRQY-LANFV------------VVPLED-----------D--  165 (425)
T ss_dssp             HHHHHHHHHHC--------CTTCEEEEEESCCHHHHHHHHTT-TCEEE------------EEEEET-----------T--
T ss_pred             HHHHHHHHHhC--------CCCCEEEEeCCCcHHHHHHHHHc-CCEEE------------EeccCC-----------C--
Confidence            99999998763        23478999999999976443322 21110            111100           0  


Q ss_pred             HHHHHHHHHHHHHHhC----CCcEEEEE-EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-cee
Q 010250          253 STRLANNLEDLILKEG----PETIAAFI-AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGC  326 (514)
Q Consensus       253 ~~~~~~~le~li~~~~----~~~~aavi-vEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~  326 (514)
                       ..++++|++.+.+..    ..++++|+ +...++.+|.+. +.+++++|.++|++||+++|+||+|++|.+.|.. ...
T Consensus       166 -~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~  243 (425)
T 1vp4_A          166 -GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTT-SLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPI  243 (425)
T ss_dssp             -EECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCH
T ss_pred             -CCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcC-CHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCH
Confidence             012577887776410    12577764 555567778664 6789999999999999999999999988776653 222


Q ss_pred             cccCCCCc---hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH--hh--cc
Q 010250          327 DKYSIKPD---LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY--KE--RN  399 (514)
Q Consensus       327 ~~~gv~pD---iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~--~~--~~  399 (514)
                      ..++..++   +.++||.++.| +|+|++++++++++.+...       ....+++.|+++++++.++|+..  ++  ++
T Consensus       244 ~~~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~  315 (425)
T 1vp4_A          244 FKIGGPERVVLLNTFSKVLAPG-LRIGMVAGSKEFIRKIVQA-------KQSADLCSPAITHRLAARYLERYDLLEQLKP  315 (425)
T ss_dssp             HHHHCTTTEEEEEESTTTTCGG-GCEEEEECCHHHHHHHHHH-------HHHHHSSCCHHHHHHHHHHHHHSCHHHHTHH
T ss_pred             HHhCCCCCEEEEeccccccccc-cceEEEeeCHHHHHHHHHH-------hhhhcCCCCHHHHHHHHHHHhcCCHHHHHHH
Confidence            22222222   34789999955 8999999999998888631       23345667899999999998763  11  34


Q ss_pred             HHHHHHHHHHHHHhhhhhc-cCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----
Q 010250          400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----  472 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----  472 (514)
                      ..++++++.+++.+.|++. ...+.+..+ ...|.++++.+.+...           ...+.+.|.++||++.++     
T Consensus       316 ~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~-----------~~~l~~~l~~~gi~v~~g~~f~~  384 (425)
T 1vp4_A          316 TIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGFD-----------TWEMFEYAKRKKVFYVPGRVFKV  384 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTCC-----------TTTTHHHHHHHTEECEEGGGGCT
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCCC-----------HHHHHHHHHHCCCEEECchhhcC
Confidence            5667778888888888764 221122222 3446788888753211           113667888889999863     


Q ss_pred             ----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250          473 ----GDNIMMSPPFIMSPEEVDELISKYGKALKATEER  506 (514)
Q Consensus       473 ----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~  506 (514)
                          .+.|||+++.. ++++|++++++|+++++++.++
T Consensus       385 ~~~~~~~iRis~~~~-~~e~i~~~l~~l~~~l~~~~~~  421 (425)
T 1vp4_A          385 YDEPSPSMRLSFCLP-PDEKIVEGIKRLREVVLEYGKE  421 (425)
T ss_dssp             TCCCCSEEEEECSSS-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCeEEEEeCCC-CHHHHHHHHHHHHHHHHHHHhh
Confidence                25799998764 8999999999999999876543

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=99.95  E-value=2.4e-27  Score=241.07  Aligned_cols=328  Identities=14%  Similarity=0.158  Sum_probs=221.5

Q ss_pred             EeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHH
Q 010250           95 YDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEA  174 (514)
Q Consensus        95 ~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA  174 (514)
                      ++.||+++|||.++.  +++| .+|++.+++.+++++...|      +.....++.+.|+++++ .+.+++++++||++|
T Consensus        19 ~~~~~~~~idl~~~~--~~~~-~~~~v~~a~~~~~~~~~~y------~~~~~~~l~~~la~~~~-~~~~~v~~~~g~~~a   88 (364)
T 1lc5_A           19 LGISPDQLLDFSANI--NPLG-MPVSVKRALIDNLDCIERY------PDADYFHLHQALARHHQ-VPASWILAGNGETES   88 (364)
T ss_dssp             HTSCGGGSEECSSCC--CTTC-CCHHHHHHHHHTGGGGGSC------CCTTCHHHHHHHHHHHT-SCGGGEEEESSHHHH
T ss_pred             cCCCccceEEecccc--CCCC-CCHHHHHHHHHHHHHhhcC------CCCCHHHHHHHHHHHHC-cCHHHEEECCCHHHH
Confidence            346889999998875  4577 7899999999988653222      12235788999999884 345789999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCCCCChhHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGETEEEY  252 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  252 (514)
                      ++.+++.+         ++ ++|++.+++||+........ |....            .++...  .|.           
T Consensus        89 l~~~~~~~---------~g-d~vl~~~p~y~~~~~~~~~~-g~~~~------------~v~~~~~~~~~-----------  134 (364)
T 1lc5_A           89 IFTVASGL---------KP-RRAMIVTPGFAEYGRALAQS-GCEIR------------RWSLREADGWQ-----------  134 (364)
T ss_dssp             HHHHHHHH---------CC-SEEEEEESCCTHHHHHHHHT-TCEEE------------EEECCGGGTTC-----------
T ss_pred             HHHHHHHc---------CC-CeEEEeCCCcHHHHHHHHHc-CCeEE------------EEeCCcccccc-----------
Confidence            99999876         23 68999999999976443332 21111            111110  000           


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecc---c
Q 010250          253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK---Y  329 (514)
Q Consensus       253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~---~  329 (514)
                          .  +++++.+..++..+.++++| ++++|.+ .+.+++++|.++|++||+++|+||+|++|++.|... .+.   +
T Consensus       135 ----~--l~~~~~~~~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~  205 (364)
T 1lc5_A          135 ----L--TDAILEALTPDLDCLFLCTP-NNPTGLL-PERPLLQAIADRCKSLNINLILDEAFIDFIPHETGF-IPALKDN  205 (364)
T ss_dssp             ----C--CTTHHHHCCTTCCEEEEESS-CTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCS-GGGCTTC
T ss_pred             ----h--hHHHHHhccCCCCEEEEeCC-CCCCCCC-CCHHHHHHHHHHhhhcCcEEEEECcChhhccCccch-hhHhccC
Confidence                0  12222222222334455667 6666765 467899999999999999999999999886544321 222   2


Q ss_pred             CCCCchhchhhhhcCCcccceeEE-eCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHH
Q 010250          330 SIKPDLVSFAKALSSAYMPIGAIL-VSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKI  407 (514)
Q Consensus       330 gv~pDiv~~sK~l~gG~~pig~v~-~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~  407 (514)
                      +....+.+++|.++.+++++|+++ +++++++.+...         ..+++.|+++++++.++|+..+ -++..++++++
T Consensus       206 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  276 (364)
T 1lc5_A          206 PHIWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRRQ---------QMPWSVNALAALAGEVALQDSAWQQATWHWLREE  276 (364)
T ss_dssp             TTEEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHHH---------SCTTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHH
T ss_pred             CCEEEEEECchhhcCCccceEEEEECCHHHHHHHHHh---------CCCCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence            222234478999983338999999 999999888742         1367789999999888886421 12345667777


Q ss_pred             HHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------CCEEEEeC
Q 010250          408 APKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMSP  480 (514)
Q Consensus       408 ~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g~~iRi~p  480 (514)
                      .+++.+.|+++   +.+...++.|.++.+.+.+.  .           ..+.+.|.++||.+.++       .+.+||+.
T Consensus       277 ~~~l~~~L~~~---~~~~~~~~~g~~~~~~~~~~--~-----------~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~  340 (364)
T 1lc5_A          277 GARFYQALCQL---PLLTVYPGRANYLLLRCERE--D-----------IDLQRRLLTQRILIRSCANYPGLDSRYYRVAI  340 (364)
T ss_dssp             HHHHHHHHHTS---TTEEECCCSSSEEEEEESCT--T-----------CCHHHHHHTTTEECEECTTSTTCCTTEEEEEC
T ss_pred             HHHHHHHHhcC---CCCEECCCCCeEEEEECCCc--H-----------HHHHHHHHHCCcEEeeCcccCCCCCCEEEEEe
Confidence            77787777654   33333455677888877531  1           12668888999999874       25799993


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHH
Q 010250          481 PFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       481 ~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                         .+++|++++++.|++.++++
T Consensus       341 ---~~~~~~~~l~~~l~~~~~~~  360 (364)
T 1lc5_A          341 ---RSAAQNERLLAALRNVLTGI  360 (364)
T ss_dssp             ---CCHHHHHHHHHHHHHHC---
T ss_pred             ---CCHHHHHHHHHHHHHHhhcc
Confidence               47899999999998887654

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=99.95  E-value=8e-27  Score=236.91  Aligned_cols=322  Identities=13%  Similarity=0.076  Sum_probs=222.5

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ  178 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A  178 (514)
                      ++++|||.+|.  ++++ .+|+|++|+.++++....+      +.....++.++++++++ .+.+++++++||++|++.+
T Consensus        31 ~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~y------~~~~~~~lr~~la~~~~-~~~~~v~~~~g~t~a~~~~  100 (363)
T 3ffh_A           31 LTKITKLSSNE--NPLG-TSKKVAAIQANSSVETEIY------PDGWASSLRKEVADFYQ-LEEEELIFTAGVDELIELL  100 (363)
T ss_dssp             CSCCEECSSCS--CTTC-CCHHHHHHHHTCBSCCCBC----------CHHHHHHHHHHHT-CCGGGEEEESSHHHHHHHH
T ss_pred             CCceEEccCCC--CCCC-CCHHHHHHHHHHHHHhhcC------CCcchHHHHHHHHHHhC-CChhhEEEeCCHHHHHHHH
Confidence            46899998874  4566 6899999999877653322      23345788999999884 3457999999999999999


Q ss_pred             HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250          179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN  258 (514)
Q Consensus       179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (514)
                      ++...        ..+++|++.+++|++........+...             ..++....+.             .+++
T Consensus       101 ~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~g~~~-------------~~v~~~~~~~-------------~d~~  146 (363)
T 3ffh_A          101 TRVLL--------DTTTNTVMATPTFVQYRQNALIEGAEV-------------REIPLLQDGE-------------HDLE  146 (363)
T ss_dssp             HHHHC--------STTCEEEEEESSCHHHHHHHHHHTCEE-------------EEEECCTTSC-------------CCHH
T ss_pred             HHHHc--------cCCCEEEEcCCChHHHHHHHHHcCCEE-------------EEecCCCCCC-------------cCHH
Confidence            98763        335689999999998654333222111             1111111111             0146


Q ss_pred             HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCc----
Q 010250          259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD----  334 (514)
Q Consensus       259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pD----  334 (514)
                      ++++.+.    +++++|+++.+++++|.+.+ .+.+.+|.+.|++ |+++|+||+|++|++ |+..........+|    
T Consensus       147 ~l~~~i~----~~~~~v~~~~p~nptG~~~~-~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~  219 (363)
T 3ffh_A          147 GMLNAID----EKTTIVWICNPNNPTGNYIE-LADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLII  219 (363)
T ss_dssp             HHHHHCC----TTEEEEEEESSCTTTCCCCC-HHHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEE
T ss_pred             HHHHhcc----cCCCEEEEeCCCCCcCCCcC-HHHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEE
Confidence            6766653    35778888777888898765 3444445444444 999999999998877 65433322222334    


Q ss_pred             hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHh
Q 010250          335 LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQD  413 (514)
Q Consensus       335 iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~  413 (514)
                      +.++||.++.+++++|++++++++++.+...         ..+++.++++++++.++|+..+. ++..++++++.+++.+
T Consensus       220 ~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~  290 (363)
T 3ffh_A          220 TRTFSKIYGLASARVGYGIADKEIIRQLNIV---------RPPFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEA  290 (363)
T ss_dssp             EEESSSTTCCSSCCCEEEEECHHHHHHHHHT---------CCSCCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EeechhhhcCchhceeeeecCHHHHHHHHHh---------CCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence            4478999973338999999999999988742         13678899999999999973321 3456777778888888


Q ss_pred             hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCHHH
Q 010250          414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSPEE  488 (514)
Q Consensus       414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~e~  488 (514)
                      .|+++.   .+...++.|.++.+.+.. .            ...+.+.|.++||++.++     ++.+|++++   |++|
T Consensus       291 ~l~~~~---g~~~~~~~~~~~~~~~~~-~------------~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~  351 (363)
T 3ffh_A          291 FAKRFE---KVKLYPANGNFVLIDLGI-E------------AGTIFSYLEKNGYITRSGAALGFPTAVRITIG---KEED  351 (363)
T ss_dssp             HHHHCT---TCEECCCCSSEEEEECSS-C------------HHHHHHHHHHTTEECEETTTTTCTTEEEEECC---CHHH
T ss_pred             HHhhCC---CceECCCCCeEEEEECCC-C------------HHHHHHHHHHCCeEEEeCccCCCCCeEEEECC---CHHH
Confidence            887631   222335567777777653 1            456888999999999874     367999954   9999


Q ss_pred             HHHHHHHHHHH
Q 010250          489 VDELISKYGKA  499 (514)
Q Consensus       489 id~~~~~l~~~  499 (514)
                      +++++++|+++
T Consensus       352 i~~~~~~l~~~  362 (363)
T 3ffh_A          352 NSAVIALLEKL  362 (363)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999999875

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=99.95  E-value=1.9e-27  Score=245.92  Aligned_cols=342  Identities=13%  Similarity=0.117  Sum_probs=224.1

Q ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----Cc-CCC-CeEEEeCC
Q 010250           97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----TA-SKM-AKVFFTNS  170 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~~-~~~-~~v~~~~s  170 (514)
                      .+|+++|||.+|.  ..+| .+|.|.+++.+++++.... . +. +.....++.+.+++++    +. .+. +++++++|
T Consensus        34 ~~g~~~idl~~g~--~~~~-~~~~v~~a~~~~~~~~~~~-~-y~-~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g  107 (412)
T 2x5d_A           34 RRGEDIIDLSMGN--PDGP-TPPHIVEKLCTVAQREDTH-G-YS-TSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIG  107 (412)
T ss_dssp             HTTCCCEECSSCC--CCSC-CCHHHHHHHHHTC------------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESC
T ss_pred             hcCCCEEecCCCC--CCCC-CCHHHHHHHHHHHhCCCCC-C-CC-CCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCC
Confidence            5789999998886  3567 7899999999988653110 0 11 1222345555665555    32 234 58999999


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250          171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE  250 (514)
Q Consensus       171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (514)
                      |++|++.+++.+.        .++++|++.+++||+........ |...            ..++...        +  .
T Consensus       108 ~~~a~~~~~~~~~--------~~gd~Vl~~~p~~~~~~~~~~~~-g~~~------------~~~~~~~--------~--~  156 (412)
T 2x5d_A          108 SKEGLAHLMLATL--------DHGDTILVPNPSYPIHIYGAVIA-GAQV------------RSVPLVP--------G--I  156 (412)
T ss_dssp             HHHHHHHHHHHHC--------CTTCEEEEEESCCHHHHHHHHHH-TCEE------------EEEECST--------T--S
T ss_pred             hHHHHHHHHHHhC--------CCCCEEEEcCCCchhHHHHHHHc-CCEE------------EEeecCC--------c--c
Confidence            9999999998763        23468999999999976443322 2111            0111100        0  0


Q ss_pred             HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceecc-
Q 010250          251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDK-  328 (514)
Q Consensus       251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~-  328 (514)
                      .+. .++++|++.+.   + ++++|++...++.+|.+ .+.+++++|.++|++||+++|+||+|+++.+.|.. ..... 
T Consensus       157 ~~~-~d~~~l~~~i~---~-~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~  230 (412)
T 2x5d_A          157 DFF-NELERAIRESI---P-KPRMMILGFPSNPTAQC-VELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQV  230 (412)
T ss_dssp             CHH-HHHHHHHHTEE---S-CCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGS
T ss_pred             CCC-CCHHHHHHhcc---c-CceEEEECCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhc
Confidence            111 23456655553   2 34445553335666765 46789999999999999999999999988766642 12221 


Q ss_pred             ---cCCCCchhchhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHH
Q 010250          329 ---YSIKPDLVSFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVE  402 (514)
Q Consensus       329 ---~gv~pDiv~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~  402 (514)
                         .+....+.++||.++ .| +++|++++++++++.+..       .....+++.++++++++.++|+..++  +++.+
T Consensus       231 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~  302 (412)
T 2x5d_A          231 PGAKDIAVEFFTLSKSYNMAG-WRIGFMVGNPELVSALAR-------IKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAR  302 (412)
T ss_dssp             TTGGGTEEEEEECC-CCSCTT-SCCEEEEECHHHHHHHHH-------HHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHH
T ss_pred             cCccCcEEEEecCccccCCcc-cceEEEEcCHHHHHHHHH-------HHhhhccCCCHHHHHHHHHHHhCCHHHHHHHHH
Confidence               222233457899997 45 899999999999988863       23345778899999999988874321  34677


Q ss_pred             HHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-------C
Q 010250          403 QVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------G  473 (514)
Q Consensus       403 ~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-------g  473 (514)
                      +++++.+++.+.|+++ ...+.   .+. |.++++.+......        .....+...|++ +||++.++       .
T Consensus       303 ~~~~~~~~l~~~L~~~-g~~~~---~~~~g~~~~~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~f~~~~~  370 (412)
T 2x5d_A          303 QYQQRRDVLVKGLREA-GWMVE---NPKASMYVWAKIPEPYAH--------LGSLEFAKKLLQDAKVSVSPGIGFGDYGD  370 (412)
T ss_dssp             HHHHHHHHHHHHHHHH-TCCCC---CCSBSSEEEEECCTTTGG--------GCHHHHHHHHHHHHCEECEEGGGGCGGGT
T ss_pred             HHHHHHHHHHHHHHHC-CCEec---CCCeeeEEEEEcCCccCC--------CCHHHHHHHHHHHCCEEEeCchhhCCCCC
Confidence            7888889999988876 33322   233 55677777421100        013457778765 69999864       3


Q ss_pred             CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          474 DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       474 ~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      +.|||+++.  ++++|++++++|.++++++
T Consensus       371 ~~iRis~~~--~~~~l~~~l~~l~~~l~~~  398 (412)
T 2x5d_A          371 DHVRFALIE--NRDRLRQAVRGIKAMFRAD  398 (412)
T ss_dssp             TEEEEECCS--CHHHHHHHHHHHHHHHHHT
T ss_pred             CeEEEEecC--CHHHHHHHHHHHHHHHHhc
Confidence            579999775  8999999999999998764

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=99.95  E-value=4.5e-27  Score=246.04  Aligned_cols=358  Identities=11%  Similarity=0.085  Sum_probs=229.2

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcC--CccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTL--PFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEA  174 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~--~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA  174 (514)
                      .|+.+|||.+|..  .++ .+|.|.+++.+++++.  ..|.. ..+..+....+++.+.+.++ ..+.++|++++||++|
T Consensus        55 ~~~~~i~l~~g~~--~~~-~~~~v~~a~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~a  130 (447)
T 3b46_A           55 QGRELINLGQGFF--SYS-PPQFAIKEAQKALDIPMVNQYSP-TRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEG  130 (447)
T ss_dssp             TTSCCEECCCCSC--SSC-CCHHHHHHHHHHTTSGGGGSCCC-TTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHH
T ss_pred             cCCCeEEccCCCC--CCC-CCHHHHHHHHHHHhCcCCCCCCC-CCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence            5678999988853  455 6899999999998752  11211 11122333344444433332 1234689999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      ++.+++.+.        ..+++|++.+++||+........+. ......................|.             
T Consensus       131 l~~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~~g~-~~~~v~~~~~~~~~~~~~~~~~~~-------------  188 (447)
T 3b46_A          131 ILSCLMGLL--------NAGDEVIVFEPFFDQYIPNIELCGG-KVVYVPINPPKELDQRNTRGEEWT-------------  188 (447)
T ss_dssp             HHHHHHHHC--------CTTCEEEEEESCCTTHHHHHHHTTC-EEEEEEEECCGGGGTSCBCSTTSE-------------
T ss_pred             HHHHHHHHc--------CCCCEEEEeCCCchhHHHHHHHcCC-EEEEEeCCCccccccccccccCcc-------------
Confidence            999999873        3357899999999987543322221 111000000000000000000011             


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce---e--ccc
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG---C--DKY  329 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~---~--~~~  329 (514)
                      .++++|++.+.    +++++|+++..++.+|.+. +++++++|.++|++||+++|+||+|+++.+.|....   .  +.+
T Consensus       189 ~d~~~l~~~l~----~~~~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~  263 (447)
T 3b46_A          189 IDFEQFEKAIT----SKTKAVIINTPHNPIGKVF-TREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIG  263 (447)
T ss_dssp             ECHHHHHTTCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHH
T ss_pred             cCHHHHHHhhc----cCCeEEEEeCCCCCCCccc-CHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCC
Confidence            11466666553    4577788887788888765 578999999999999999999999999877663211   1  123


Q ss_pred             CCCCchhchhhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc----cHHHHH
Q 010250          330 SIKPDLVSFAKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER----NIVEQV  404 (514)
Q Consensus       330 gv~pDiv~~sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~----~~~~~~  404 (514)
                      +..+++.++||.++.+++++|++++ ++++++.+..       ..+..+++.++++++++.++|+....+    ++.+++
T Consensus       264 ~~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~~l~~-------~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~  336 (447)
T 3b46_A          264 QLTLTVGSAGKSFAATGWRIGWVLSLNAELLSYAAK-------AHTRICFASPSPLQEACANSINDALKIGYFEKMRQEY  336 (447)
T ss_dssp             TTEEEEEEHHHHTTCTTSCCEEEECSCHHHHHHHHH-------HHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             CcEEEEecCchhcCCcchhhEEEEeCCHHHHHHHHH-------HHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHH
Confidence            5555566899999833389999999 9999988863       133457788899999999999876322    356778


Q ss_pred             HHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCC-CCC---ccchHHHHHHHHH-HCCcEEEee-------
Q 010250          405 NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEP-FPP---EWGIGAYFGAQCE-KHGMLVRVS-------  472 (514)
Q Consensus       405 ~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~-~~~---~~~~~~~~~~~l~-~~Gv~~~~~-------  472 (514)
                      +++++++.+.|+++ .....  ....|.++++++.....+... ++.   .......++..|. ++||++.++       
T Consensus       337 ~~~~~~l~~~L~~~-g~~~~--~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~  413 (447)
T 3b46_A          337 INKFKIFTSIFDEL-GLPYT--APEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKE  413 (447)
T ss_dssp             HHHHHHHHHHHHHH-TCCEE--CCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGG
T ss_pred             HHHHHHHHHHHHHC-CCeec--CCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCC
Confidence            88888888888876 33322  233467778887542111000 000   0012446777776 589999864       


Q ss_pred             -----CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250          473 -----GDNIMMSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       473 -----g~~iRi~p~~~~t~e~id~~~~~l~~  498 (514)
                           .+.|||+++  .++++|++++++|++
T Consensus       414 ~~~~~~~~iRls~~--~~~e~l~~~~~~l~~  442 (447)
T 3b46_A          414 HEKAAENLLRFAVC--KDDAYLENAVERLKL  442 (447)
T ss_dssp             GGGGGTTEEEEECC--SCHHHHHHHHHHGGG
T ss_pred             ccCCCCCEEEEEEe--CCHHHHHHHHHHHHH
Confidence                 357999965  589999999999876

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=99.95  E-value=7.6e-27  Score=239.32  Aligned_cols=339  Identities=12%  Similarity=0.095  Sum_probs=226.4

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCCe-EEEeCChhHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMAK-VFFTNSGSEANDT  177 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~~-v~~~~sGseA~~~  177 (514)
                      +.++||.++.  ..+| .+|++.+++.+++++....+....+..+....+++.+.+.++. .+.++ +++++||++|++.
T Consensus        26 ~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~  102 (389)
T 1gd9_A           26 KDVISLGIGE--PDFD-TPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLM  102 (389)
T ss_dssp             SSCEECCCCS--CSSC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHH
T ss_pred             cCeEecCCCC--CCCC-CCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHH
Confidence            3578998775  3466 6899999999998763221111111223334444444443331 24578 9999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCCCCChhHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGETEEEYSTR  255 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  255 (514)
                      +++.+.        .++++|++.+++||+....... .|...            ..++...  .|.             .
T Consensus       103 ~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~-~g~~~------------~~v~~~~~~~~~-------------~  148 (389)
T 1gd9_A          103 GLSAFL--------KDGEEVLIPTPAFVSYAPAVIL-AGGKP------------VEVPTYEEDEFR-------------L  148 (389)
T ss_dssp             HHTTTC--------CTTCEEEEEESCCTTHHHHHHH-HTCEE------------EEEECCGGGTTC-------------C
T ss_pred             HHHHhC--------CCCCEEEEcCCCchhHHHHHHH-CCCEE------------EEeccCCccCCC-------------C
Confidence            998763        2357899999999997543322 22111            1111110  010             0


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc-cceeccc-CC-C
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MFGCDKY-SI-K  332 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~-~~~~~~~-gv-~  332 (514)
                      ++++|++.+.    +++++|+++..++.+|.+. +++.+++|.++|++||+++|+||+|+++.+.|. ......+ +. .
T Consensus       149 d~~~l~~~l~----~~~~~v~~~~~~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  223 (389)
T 1gd9_A          149 NVDELKKYVT----DKTRALIINSPCNPTGAVL-TKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFE  223 (389)
T ss_dssp             CHHHHHHHCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGG
T ss_pred             CHHHHHHhcC----cCceEEEEECCCCCCCcCC-CHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCC
Confidence            1467777664    2567777777788788764 578999999999999999999999998877665 2222222 21 2


Q ss_pred             Cch--hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh----ccHHHHHHH
Q 010250          333 PDL--VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE----RNIVEQVNK  406 (514)
Q Consensus       333 pDi--v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~----~~~~~~~~~  406 (514)
                      .|+  .+++|.++.+++|+|++++++++++.+..       ..+..+++.++++++++.++|+...+    +++.+++++
T Consensus       224 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  296 (389)
T 1gd9_A          224 RTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVK-------FQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDR  296 (389)
T ss_dssp             GEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHH-------HHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred             CEEEEecChhhcCCcccceEEEEECHHHHHHHHH-------HHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHH
Confidence            354  36899997333899999999999988864       23445778889999999888875433    345677888


Q ss_pred             HHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEE
Q 010250          407 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMM  478 (514)
Q Consensus       407 ~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi  478 (514)
                      +.+++.+.|+++ ...+..  ...|.++++.+.....          ....+.+.|+ ++||++.++       .+.+||
T Consensus       297 ~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi  363 (389)
T 1gd9_A          297 RRKLVWKRLNEM-GLPTVK--PKGAFYIFPRIRDTGL----------TSKKFSELMLKEARVAVVPGSAFGKAGEGYVRI  363 (389)
T ss_dssp             HHHHHHHHHHHT-TCCCCC--CCBTTEECCBCGGGTC----------CHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEE
T ss_pred             HHHHHHHHHHHc-CCeecC--CCeeeEEEEeccCCCC----------CHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEE
Confidence            888888888876 333321  1224455556542110          1456778887 899999874       357999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +++  .++++|++++++|++++++
T Consensus       364 ~~~--~~~~~i~~~l~~l~~~~~~  385 (389)
T 1gd9_A          364 SYA--TAYEKLEEAMDRMERVLKE  385 (389)
T ss_dssp             ECC--SCHHHHHHHHHHHHHHHHH
T ss_pred             Eec--CCHHHHHHHHHHHHHHHHh
Confidence            965  4999999999999998864

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=99.95  E-value=1.3e-26  Score=241.15  Aligned_cols=349  Identities=14%  Similarity=0.087  Sum_probs=236.8

Q ss_pred             EEeCCCCEEEEccCCcccc-cCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc----CCCCeEEEe
Q 010250           94 VYDVNGKKYLDSLAGLWCT-ALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA----SKMAKVFFT  168 (514)
Q Consensus        94 ~~d~dG~~ylD~~s~~~~~-~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~----~~~~~v~~~  168 (514)
                      ..+.+|+.+|||..|.... +-.+.+|.|++|+.+++++.... .  ..+.....++.+.+++++..    ...++++++
T Consensus        48 ~~~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~-~--y~~~~g~~~lr~~la~~~~~~~~~~~~~~v~~t  124 (427)
T 3dyd_A           48 VKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYN-G--YAPSIGFLSSREEIASYYHCPEAPLEAKDVILT  124 (427)
T ss_dssp             CCCCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSS-S--CCCTTCCHHHHHHHHHHHCBTTBCCCGGGEEEE
T ss_pred             hcccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCC-C--CCCCCCcHHHHHHHHHHHhhcCCCCChHHEEEe
Confidence            3445689999999886321 12347899999999998763211 0  11233456788888888742    246799999


Q ss_pred             CChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCC
Q 010250          169 NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPG  246 (514)
Q Consensus       169 ~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  246 (514)
                      +||++|++.+++.+.        .++++|++.+++|++........+....             .++..  ..|.     
T Consensus       125 ~g~t~al~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~g~~~~-------------~~~~~~~~~~~-----  178 (427)
T 3dyd_A          125 SGCSQAIDLCLAVLA--------NPGQNILVPRPGFSLYKTLAESMGIEVK-------------LYNLLPEKSWE-----  178 (427)
T ss_dssp             SSHHHHHHHHHHHHC--------CTTCEEEEEESCCTHHHHHHHHTTCEEE-------------EEEEEGGGTTE-----
T ss_pred             cCcHHHHHHHHHHhc--------CCCCEEEEcCCCchhHHHHHHHcCCEEE-------------EEecccccCCC-----
Confidence            999999999999874        3457899999999987644333222111             00100  0000     


Q ss_pred             CChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-e
Q 010250          247 ETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-G  325 (514)
Q Consensus       247 ~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~  325 (514)
                              .+++++++.+.   + ++.+|++...++++|.+. +++.+++|.++|++||+++|+||+|++|++.|..+ .
T Consensus       179 --------~d~~~l~~~l~---~-~~~~v~i~~p~nptG~~~-~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~  245 (427)
T 3dyd_A          179 --------IDLKQLEYLID---E-KTACLIVNNPSNPCGSVF-SKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEP  245 (427)
T ss_dssp             --------ECHHHHHSSCC---T-TEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCC
T ss_pred             --------CCHHHHHHHhc---c-CCCEEEEECCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCcc
Confidence                    01456665553   2 345555555577888754 67889999999999999999999999998888643 4


Q ss_pred             ecccCCCCchh---chhhhhcCCcccceeEEeC-------HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250          326 CDKYSIKPDLV---SFAKALSSAYMPIGAILVS-------PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY  395 (514)
Q Consensus       326 ~~~~gv~pDiv---~~sK~l~gG~~pig~v~~~-------~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~  395 (514)
                      ...++..++++   ++||.++.+++|+|+++++       +++++.+..        ....+++.++++++++.++|+..
T Consensus       246 ~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~--------~~~~~~~~~~~~~~a~~~~L~~~  317 (427)
T 3dyd_A          246 LATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVK--------LSQRILGPCTIVQGALKSILCRT  317 (427)
T ss_dssp             GGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHH--------HHHHHCCSCHHHHHHHHHHHHHS
T ss_pred             HHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHH--------HHhccCCCCHHHHHHHHHHHHhc
Confidence            45555566666   7899876544899999987       467777653        12236788999999999998842


Q ss_pred             hh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEE
Q 010250          396 KE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVR  470 (514)
Q Consensus       396 ~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~  470 (514)
                      .+   ++..++++++.+++.+.|+++   +.+..+.+. |.++.+.+.....+.     .. ....+...|+ ++||++.
T Consensus       318 ~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~p~~g~~~~~~l~~~~~~~-----~~-~~~~~~~~l~~~~gV~v~  388 (427)
T 3dyd_A          318 PGEFYHNTLSFLKSNADLCYGALAAI---PGLRPVRPSGAMYLMVGIEMEHFPE-----FE-NDVEFTERLVAEQSVHCL  388 (427)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHS---TTEEEECCSBTTEEEEEECGGGCTT-----CS-SHHHHHHHHHHHHCEECE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHhcC---CCceecCCCeeEEEEEecCHhhcCC-----CC-CHHHHHHHHHHHCCEEEE
Confidence            22   345677788888888888765   434434333 556666765321110     00 1345667775 8999998


Q ss_pred             ee-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          471 VS-----GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       471 ~~-----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ++     .+.+|++  +.+++++|++++++|.++++++
T Consensus       389 ~g~~~~~~~~iRis--~~~~~e~i~~~l~~l~~~l~~~  424 (427)
T 3dyd_A          389 PATCFEYPNFIRVV--ITVPEVMMLEACSRIQEFCEQH  424 (427)
T ss_dssp             EGGGGTCTTEEEEE--SCSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccCCCCeEEEE--ECCCHHHHHHHHHHHHHHHHHh
Confidence            75     3679999  5689999999999999998764

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=99.95  E-value=7.3e-27  Score=236.24  Aligned_cols=337  Identities=14%  Similarity=0.098  Sum_probs=234.2

Q ss_pred             eeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEe
Q 010250           89 SEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFT  168 (514)
Q Consensus        89 ~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~  168 (514)
                      .+|.++++.+|+++|||.+|.  ++++ .+|+|++++.++++....+      +.....++.+.++++++ .+.++++++
T Consensus         5 ~~~~~~~~~~~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~y------~~~~~~~l~~~la~~~~-~~~~~i~~~   74 (354)
T 3ly1_A            5 PESAAFTAPSTDNPIRINFNE--NPLG-MSPKAQAAARDAVVKANRY------AKNEILMLGNKLAAHHQ-VEAPSILLT   74 (354)
T ss_dssp             ----CCCCCCSSSCEECSSCC--CSSC-CCHHHHHHHHHTGGGTTSC------CHHHHHHHHHHHHHHTT-SCGGGEEEE
T ss_pred             cccccccCCCCCceEEccCCC--CCCC-CCHHHHHHHHHHHhhCcCC------CCCchHHHHHHHHHHhC-CChHHEEEe
Confidence            456778889999999999875  5565 7899999999988763322      33456789999999984 346799999


Q ss_pred             CChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCC
Q 010250          169 NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET  248 (514)
Q Consensus       169 ~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (514)
                      +||++|++.+++.+.        ..+++|++.+++|++........+. ..            ..++....+.       
T Consensus        75 ~g~~~a~~~~~~~l~--------~~gd~vl~~~~~~~~~~~~~~~~g~-~~------------~~~~~~~~~~-------  126 (354)
T 3ly1_A           75 AGSSEGIRAAIEAYA--------SLEAQLVIPELTYGDGEHFAKIAGM-KV------------TKVKMLDNWA-------  126 (354)
T ss_dssp             SHHHHHHHHHHHHHC--------CTTCEEEEESSSCTHHHHHHHHTTC-EE------------EEECCCTTSC-------
T ss_pred             CChHHHHHHHHHHHh--------CCCCeEEECCCCchHHHHHHHHcCC-EE------------EEecCCCCCC-------
Confidence            999999999998763        2346899999999987543332221 11            1111111111       


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-e-
Q 010250          249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-C-  326 (514)
Q Consensus       249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~-  326 (514)
                            .++++|++.+.+.  +++++|+++..++++|.+.+ .+.+++|.++| +||+++|+||+|+++++.|.... . 
T Consensus       127 ------~d~~~l~~~l~~~--~~~~~v~l~~p~nptG~~~~-~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~  196 (354)
T 3ly1_A          127 ------FDIEGLKAAVAAY--SGPSIVYLVNPNNPTGTITP-ADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISP  196 (354)
T ss_dssp             ------CCHHHHHHHHHTC--SSCEEEEEESSCTTTCCCCC-HHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHH
T ss_pred             ------CCHHHHHHHhccC--CCCCEEEEeCCCCCcCCCcC-HHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHH
Confidence                  0157788877631  24566666666777887764 45566677777 69999999999998877664221 1 


Q ss_pred             --ccc-CCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHH
Q 010250          327 --DKY-SIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVE  402 (514)
Q Consensus       327 --~~~-gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~  402 (514)
                        ..+ +....+.+++|.++.+++++|++++++++++.+...         ...++.|+++++++.++|+..+ -++..+
T Consensus       197 ~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~  267 (354)
T 3ly1_A          197 MITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRY---------VAGEKINFSGVDAALASMNDSAFITYSKK  267 (354)
T ss_dssp             HHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGG---------TTCSCCCHHHHHHHHHHTTCHHHHHHHHH
T ss_pred             HhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHHHHHh---------cCCCCCCHHHHHHHHHHhcCHHHHHHHHH
Confidence              112 222334478999973338999999999999988742         1236788999999988887432 134567


Q ss_pred             HHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE----eeCCEEEE
Q 010250          403 QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VSGDNIMM  478 (514)
Q Consensus       403 ~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~g~~iRi  478 (514)
                      +++++.+++.+.|+++ ....   .++.|.++++.+.. .            ...+.+.|.++||++.    ...+.+|+
T Consensus       268 ~~~~~~~~l~~~l~~~-~~~~---~~~~~~~~~~~~~~-~------------~~~~~~~l~~~gi~v~g~~~~~~~~iRi  330 (354)
T 3ly1_A          268 SNDVSRQILLKALEDL-KLPY---LPSEGNFVFHQLVV-P------------LKDYQTHMADAGVLIGRAFPPADNWCRI  330 (354)
T ss_dssp             HHHHHHHHHHHHHHHH-TCCB---CCCCSSEEEEECSS-C------------HHHHHHHHHHTTEECCCCCTTCTTEEEE
T ss_pred             HHHHHHHHHHHHHHHC-CCeE---CCCCceEEEEECCC-C------------HHHHHHHHHHCCEEEeecCCCCCCEEEE
Confidence            7888888888888876 3222   24567777777753 1            4568888999999987    12357999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +.   .+++|+++++++|++++++
T Consensus       331 s~---~~~~~i~~~~~~l~~~l~~  351 (354)
T 3ly1_A          331 SL---GTPQEMQWVADTMREFRKK  351 (354)
T ss_dssp             EC---CCHHHHHHHHHHHHHHHHT
T ss_pred             Ec---CCHHHHHHHHHHHHHHHHh
Confidence            93   3899999999999988753

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.95  E-value=6.8e-27  Score=241.65  Aligned_cols=334  Identities=13%  Similarity=0.104  Sum_probs=225.9

Q ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-----cCCCCeEEEeCCh
Q 010250           97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-----ASKMAKVFFTNSG  171 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-----~~~~~~v~~~~sG  171 (514)
                      .+|++++||.++..  .++ .+|++.+++ +++++....+.    ......++.+.+++++.     +.+.+++++++||
T Consensus        40 ~~g~~~i~l~~~~~--~~~-~~~~v~~a~-~~l~~~~~~y~----~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~  111 (409)
T 2gb3_A           40 KRGVRIHHLNIGQP--DLK-TPEVFFERI-YENKPEVVYYS----HSAGIWELREAFASYYKRRQRVDVKPENVLVTNGG  111 (409)
T ss_dssp             HTTCEEEECSSCCC--CSC-CCTHHHHHH-HHTCCSSCCCC----CTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHH
T ss_pred             hcCCCEEeccCCCC--CCC-CCHHHHHHH-HHHhcCCCCCC----CCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCH
Confidence            36889999988754  456 578999999 88865321111    11123455555555542     1345789999999


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCCCCCh
Q 010250          172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGETE  249 (514)
Q Consensus       172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  249 (514)
                      ++|++.+++.+.        .++++|++.+++||+....... .|....            .++...  .|..       
T Consensus       112 t~a~~~~~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~-~g~~~~------------~v~~~~~~~~~~-------  163 (409)
T 2gb3_A          112 SEAILFSFAVIA--------NPGDEILVLEPFYANYNAFAKI-AGVKLI------------PVTRRMEEGFAI-------  163 (409)
T ss_dssp             HHHHHHHHHHHC--------CTTCEEEEEESCCTHHHHHHHH-HTCEEE------------EEECCGGGTSCC-------
T ss_pred             HHHHHHHHHHhC--------CCCCEEEEcCCCchhHHHHHHH-cCCEEE------------EeccCCCCCCcc-------
Confidence            999999998773        3357899999999987543222 221111            011100  0000       


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceeccc
Q 010250          250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY  329 (514)
Q Consensus       250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~  329 (514)
                             +++|++.+.    +++++|+++++++.+|.+. +++++++|.++|++||+++|+||+|+++++.|..... ..
T Consensus       164 -------~~~l~~~l~----~~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~-~~  230 (409)
T 2gb3_A          164 -------PQNLESFIN----ERTKGIVLSNPCNPTGVVY-GKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASA-LS  230 (409)
T ss_dssp             -------CTTGGGGCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCG-GG
T ss_pred             -------HHHHHHhhC----cCCeEEEECCCCCCCCCCc-CHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCc-cc
Confidence                   134544443    3577788887788888765 5689999999999999999999999988776643332 22


Q ss_pred             CC-CCchh--chhhhhcCCcccceeEEeCH-HHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccHHHH
Q 010250          330 SI-KPDLV--SFAKALSSAYMPIGAILVSP-EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNIVEQ  403 (514)
Q Consensus       330 gv-~pDiv--~~sK~l~gG~~pig~v~~~~-~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~~~~  403 (514)
                      ++ ..|++  +++|.++.+++++|++++++ ++++.+...       ...++ +.++++++++.++|+...  -+++.++
T Consensus       231 ~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~~~-------~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~  302 (409)
T 2gb3_A          231 IESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMKL-------AQGRL-APPLLEQIGSVGLLNLDDSFFDFVRET  302 (409)
T ss_dssp             SCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHHH-------HHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred             cCCCCEEEEecchhccCCccceEEEEEECcHHHHHHHHHH-------HhccC-CCCHHHHHHHHHHHhccHHHHHHHHHH
Confidence            33 34665  68999973338999999998 898887631       23344 778999998888885321  1345777


Q ss_pred             HHHHHHHHHhhhhhccCCCc-eeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC------CcEEEee----
Q 010250          404 VNKIAPKFQDGVKAFSDSPI-IGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH------GMLVRVS----  472 (514)
Q Consensus       404 ~~~~~~~l~~~L~~l~~~~~-~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------Gv~~~~~----  472 (514)
                      ++++.+++.+.|+++ ...+ ..  ...|.+..+.+.. .           ....+.+.|+++      ||++.++    
T Consensus       303 ~~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~~~~~~~-~-----------~~~~l~~~l~~~~~~~~~gi~v~~g~~f~  367 (409)
T 2gb3_A          303 YRERVETVLKKLEEH-GLKRFTK--PSGAFYITAELPV-E-----------DAEEFARWMLTDFNMDGETTMVAPLRGFY  367 (409)
T ss_dssp             HHHHHHHHHHHHHHT-TCCCBCC--CSBSSEEEEECSS-S-----------CHHHHHHHHHHSCCBTTEEEECEEGGGGC
T ss_pred             HHHHHHHHHHHHHHc-CceeeeC--CCeeEEEEEEeCC-C-----------CHHHHHHHHHhccccccCcEEEeCchHhC
Confidence            888888898888876 3333 21  2235566666641 1           145678888887      9999864    


Q ss_pred             ------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          473 ------GDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       473 ------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                            .+.+|++++  +++++|++++++|+++++++.
T Consensus       368 ~~~~~~~~~iRis~~--~~~e~i~~~~~~l~~~l~~~~  403 (409)
T 2gb3_A          368 LTPGLGKKEIRIACV--LEKDLLSRAIDVLMEGLKMFC  403 (409)
T ss_dssp             SSTTTTSSEEEEECC--SCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEEeC--CCHHHHHHHHHHHHHHHHHhh
Confidence                  357999976  899999999999999997764

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=99.95  E-value=7.8e-27  Score=238.66  Aligned_cols=328  Identities=16%  Similarity=0.114  Sum_probs=226.9

Q ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHH
Q 010250          102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKL  181 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~  181 (514)
                      +|||.+|..  .++ .+|.+.+++.+++++...|    . ......++.+.|+++++ .+.+++++++||++|++.+++.
T Consensus        27 ~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~y----~-~~~~~~~l~~~la~~~~-~~~~~v~~~~g~~~a~~~~~~~   97 (381)
T 1v2d_A           27 AVNLGQGFP--SNP-PPPFLLEAVRRALGRQDQY----A-PPAGLPALREALAEEFA-VEPESVVVTSGATEALYVLLQS   97 (381)
T ss_dssp             CEECCCCSC--SSC-CCHHHHHHHHHHTTTSCSC----C-CTTCCHHHHHHHHHHHT-SCGGGEEEESSHHHHHHHHHHH
T ss_pred             eEEecCCCC--CCC-CCHHHHHHHHHHHHHhcCC----C-CCCCCHHHHHHHHHhcC-CChhhEEEcCChHHHHHHHHHH
Confidence            789988753  466 6899999999998762211    1 12235788999999874 3456899999999999999988


Q ss_pred             HHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC---CcccCCCCCCChhHHHHHHHH
Q 010250          182 VWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP---HYWRYAHPGETEEEYSTRLAN  258 (514)
Q Consensus       182 a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~  258 (514)
                      +.        .++++|++.+++||+..... ...|...            ..++.+   ..|.             .+++
T Consensus        98 ~~--------~~gd~Vl~~~~~~~~~~~~~-~~~g~~~------------~~v~~~~~~~~~~-------------~d~~  143 (381)
T 1v2d_A           98 LV--------GPGDEVVVLEPFFDVYLPDA-FLAGAKA------------RLVRLDLTPEGFR-------------LDLS  143 (381)
T ss_dssp             HC--------CTTCEEEEEESCCTTHHHHH-HHTTCEE------------EEEECEEETTEEE-------------CCHH
T ss_pred             hC--------CCCCEEEEcCCCchhHHHHH-HHcCCEE------------EEEeCCCCCccCC-------------cCHH
Confidence            73        34578999999999975322 2222111            111111   1111             1145


Q ss_pred             HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceec--ccCCCCch
Q 010250          259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCD--KYSIKPDL  335 (514)
Q Consensus       259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~--~~gv~pDi  335 (514)
                      +|++.+.    +++++|+++.+++.+|.+. +.+++++|.++|++||+++|+||+|+++.. |.. ....  .++..+++
T Consensus       144 ~l~~~l~----~~~~~v~~~~~~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~~~~~~~~~  217 (381)
T 1v2d_A          144 ALEKALT----PRTRALLLNTPMNPTGLVF-GERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREFAPERTFTV  217 (381)
T ss_dssp             HHHTTCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHHCTTTEEEE
T ss_pred             HHHHhcC----cCCEEEEECCCCCCCCCcc-CHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHhcCCCEEEE
Confidence            6665553    3578888888888888765 568999999999999999999999998744 431 1111  34555666


Q ss_pred             hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--h--ccHHHHHHHHHHHH
Q 010250          336 VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--E--RNIVEQVNKIAPKF  411 (514)
Q Consensus       336 v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~--~~~~~~~~~~~~~l  411 (514)
                      .+++|.++.+++++|++++++++++.+...       .+..+++.++++++++.++|+...  +  +++.++++++++++
T Consensus       218 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l  290 (381)
T 1v2d_A          218 GSAGKRLEATGYRVGWIVGPKEFMPRLAGM-------RQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLL  290 (381)
T ss_dssp             EEHHHHTTCGGGCCEEEECCTTTHHHHHHH-------HHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred             eechhhcCCcccceEEEEeCHHHHHHHHHH-------HhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHH
Confidence            789999873338999999999998887631       233467788999999999998652  2  34677888888999


Q ss_pred             HhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------CCEEEEeCCC
Q 010250          412 QDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---------GDNIMMSPPF  482 (514)
Q Consensus       412 ~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------g~~iRi~p~~  482 (514)
                      .+.|+++ ...+..  ...|.++++.+.+.           .    +...+.++||++.++         .+.+||+++.
T Consensus       291 ~~~L~~~-g~~~~~--~~~~~~~~~~~~~~-----------~----~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~  352 (381)
T 1v2d_A          291 AGGLRAM-GLRVYV--PEGTYFLMAELPGW-----------D----AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK  352 (381)
T ss_dssp             HHHHHHT-TCCEEC--CSBSSEEEEECTTC-----------C----HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS
T ss_pred             HHHHHHC-CCEecC--CCcceEEEEecChH-----------h----HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC
Confidence            9988874 322221  11255666766421           0    446778999999864         3579999765


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHH
Q 010250          483 IMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       483 ~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                        ++++|++++++|++++++.++
T Consensus       353 --~~~~i~~~~~~l~~~l~~~r~  373 (381)
T 1v2d_A          353 --TEEELHLALERLGRVVNSPRE  373 (381)
T ss_dssp             --CHHHHHHHHHHHHHHC-----
T ss_pred             --CHHHHHHHHHHHHHHHhhccc
Confidence              999999999999999877654

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.95  E-value=1.1e-26  Score=238.63  Aligned_cols=332  Identities=14%  Similarity=0.109  Sum_probs=226.0

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----Cc-CCCCeEEEeCChh
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----TA-SKMAKVFFTNSGS  172 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~~-~~~~~v~~~~sGs  172 (514)
                      .|+.++||.++..  .+|+ +|.+.+++.+++++....+.    ......++.+.+++++    +. ...+++++++||+
T Consensus        39 ~g~~~i~l~~~~~--~~~~-~~~v~~a~~~~~~~~~~~y~----~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t  111 (389)
T 1o4s_A           39 KGEDVINLTAGEP--DFPT-PEPVVEEAVRFLQKGEVKYT----DPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAK  111 (389)
T ss_dssp             TTCCCEECCCSSC--SSCC-CHHHHHHHHHHHTTCCCCCC----CTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHH
T ss_pred             cCCCEEEccCCCC--CCCC-CHHHHHHHHHHHhcCCCCCC----CCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHH
Confidence            5788999988753  5675 89999999999876322111    1112345555555544    21 2457899999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCCCCChh
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGETEE  250 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  250 (514)
                      +|++.+++.+.        .++++|++.+++|++....... .|...            ..++...  .|.         
T Consensus       112 ~al~~~~~~l~--------~~gd~Vl~~~~~~~~~~~~~~~-~g~~~------------~~v~~~~~~~~~---------  161 (389)
T 1o4s_A          112 QALFNAFMALL--------DPGDEVIVFSPVWVSYIPQIIL-AGGTV------------NVVETFMSKNFQ---------  161 (389)
T ss_dssp             HHHHHHHHHHC--------CTTCEEEEEESCCTTHHHHHHH-TTCEE------------EEEECCGGGTTC---------
T ss_pred             HHHHHHHHHhC--------CCCCEEEEcCCCchhHHHHHHH-cCCEE------------EEEecCCccCCC---------
Confidence            99999998763        2346899999999987543322 22111            1111110  010         


Q ss_pred             HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250          251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS  330 (514)
Q Consensus       251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g  330 (514)
                          .++++|++.+.    +++++|+++..++.+|.+. +++++++|.++|++||+++|+||+|+++.+.|.......+.
T Consensus       162 ----~d~~~l~~~l~----~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~  232 (389)
T 1o4s_A          162 ----PSLEEVEGLLV----GKTKAVLINSPNNPTGVVY-RREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVS  232 (389)
T ss_dssp             ----CCHHHHHHTCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHC
T ss_pred             ----CCHHHHHHhcc----cCceEEEEcCCCCCCCCCC-CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcC
Confidence                01466766653    3567777777788888764 57899999999999999999999999886665322222221


Q ss_pred             --CCCch--hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHH
Q 010250          331 --IKPDL--VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNK  406 (514)
Q Consensus       331 --v~pDi--v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~  406 (514)
                        -..|+  .+++|.++.+++++|++++++++++.+..       ....++++.+++++.++.++|+.. .+++.+++++
T Consensus       233 ~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~  304 (389)
T 1o4s_A          233 EGFDRIVYINGFSKSHSMTGWRVGYLISSEKVATAVSK-------IQSHTTSCINTVAQYAALKALEVD-NSYMVQTFKE  304 (389)
T ss_dssp             SSSTTEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHH-------HHHHHTCSCCHHHHHHHHHHTTCC-CHHHHHHHHH
T ss_pred             CCCCcEEEEeechhhcCCcccceEEEEeCHHHHHHHHH-------HhhhcccCCCHHHHHHHHHHHhcc-HHHHHHHHHH
Confidence              12343  47899997333899999999999888863       234457778899888888877632 3456788889


Q ss_pred             HHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-----CCEEEEeC
Q 010250          407 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-----GDNIMMSP  480 (514)
Q Consensus       407 ~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-----g~~iRi~p  480 (514)
                      +++++.+.|+++ ......  ...|.++.+.+. .            ....+.+.|+ ++||.+.++     ++.+|+++
T Consensus       305 ~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~-~------------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~  368 (389)
T 1o4s_A          305 RKNFVVERLKKM-GVKFVE--PEGAFYLFFKVR-G------------DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSF  368 (389)
T ss_dssp             HHHHHHHHHHHT-TCCCCC--CSBSSEEEEECS-S------------CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEEC
T ss_pred             HHHHHHHHHHhc-CCeeec--CCcceEEEEeCC-C------------CHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEE
Confidence            999999999876 333321  112555666664 1            1345778887 889999875     25899997


Q ss_pred             CCCCCHHHHHHHHHHHHHHHH
Q 010250          481 PFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       481 ~~~~t~e~id~~~~~l~~~l~  501 (514)
                      +  .++++|++++++|.++++
T Consensus       369 ~--~~~~~l~~~l~~l~~~l~  387 (389)
T 1o4s_A          369 A--TSIERLTEALDRIEDFLN  387 (389)
T ss_dssp             C--SCHHHHHHHHHHHHHHHT
T ss_pred             e--CCHHHHHHHHHHHHHHHh
Confidence            6  499999999999998764

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=99.95  E-value=2.3e-27  Score=242.02  Aligned_cols=333  Identities=11%  Similarity=0.006  Sum_probs=222.1

Q ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCCeEEEeCChhHHH
Q 010250           97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEAN  175 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~~v~~~~sGseA~  175 (514)
                      .+| ++|||.+|.  ..++ .+|.|.+|+.+++.....|.. ..+..+...++++.+.+.++. .+.+++++++||++|+
T Consensus        21 ~~g-~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~y~~-~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al   95 (376)
T 3ezs_A           21 PKK-RGLDLGIGE--PQFE-TPKFIQDALKNHTHSLNIYPK-SAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVL   95 (376)
T ss_dssp             CSS-CCCBCSSCC--CCSC-CCHHHHHHHHTTGGGGGSCCC-TTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHH
T ss_pred             ccC-CEEEeCCCC--CCCC-CCHHHHHHHHHhhhhcCCCCC-CCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHH
Confidence            467 899998886  4566 689999999988744322211 112334555566666555442 2568999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      +.+++.+.      .+.++++|++.+++||+........+....             .++........            
T Consensus        96 ~~~~~~~~------~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~-------------~~~~~~~~~~~------------  144 (376)
T 3ezs_A           96 FNFPSFVL------FDYQNPTIAYPNPFYQIYEGAAKFIKAKSL-------------LMPLTKENDFT------------  144 (376)
T ss_dssp             HHHHHHHT------TTCSSCEEEEEESCCTHHHHHHHHTTCEEE-------------EEECCGGGTSC------------
T ss_pred             HHHHHHHc------CCCCCCEEEEecCCcHhHHHHHHHcCCEEE-------------EcccCCCCCcc------------
Confidence            99998874      111157899999999987544332221111             01111000000            


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceec--------
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCD--------  327 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~--------  327 (514)
                       . ++++.+..    ++.+|++...++++|.+. +.+.+++|.++|++||+++|+||+|++|.+.|......        
T Consensus       145 -~-~l~~~~~~----~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  217 (376)
T 3ezs_A          145 -P-SLNEKELQ----EVDLVILNSPNNPTGRTL-SLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGN  217 (376)
T ss_dssp             -C-CCCHHHHH----HCSEEEECSSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTC
T ss_pred             -h-hHHhhhcc----CCCEEEEcCCCCCcCCCC-CHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccc
Confidence             0 23333332    234555544477778665 56789999999999999999999999987777443321        


Q ss_pred             -ccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHH
Q 010250          328 -KYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVN  405 (514)
Q Consensus       328 -~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~  405 (514)
                       .++....+.++||.++.+++++|++++++++++.+..       ..+..+++.++++++++.++|+..+. ++..++++
T Consensus       218 ~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  290 (376)
T 3ezs_A          218 EAFKNVLVIHSLSKRSSAPGLRSGFIAGDSRLLEKYKA-------FRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYA  290 (376)
T ss_dssp             TTCTTEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHH-------HHTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHH
T ss_pred             cccCcEEEEecchhccCCccceeEEEeeCHHHHHHHHH-------HHhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHH
Confidence             2344345568999996333899999999999998874       23445778899999999988874211 23455666


Q ss_pred             HHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee---------CCE
Q 010250          406 KIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS---------GDN  475 (514)
Q Consensus       406 ~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~---------g~~  475 (514)
                      ++.+++.+.|+     .+.  .+..|.++++.+.+              ...+.+.|.+ +||++.++         .+.
T Consensus       291 ~~~~~l~~~l~-----~~~--~~~~~~~~~~~~~~--------------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~  349 (376)
T 3ezs_A          291 NNLKLARKIFK-----NTL--IYPYSFYVYLPVQN--------------GENFAKTLYQNEGIITLPALYLGRNRIGADY  349 (376)
T ss_dssp             HHHHHHHHHST-----TCC--CCSBSSEEEEECSC--------------HHHHHHHHHHHHCCBCEEGGGGCSTTTTTTE
T ss_pred             HHHHHHHHHhc-----CCC--CCCcceEEEEECCC--------------HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCe
Confidence            66666666665     111  33557777777751              3457788887 89999863         357


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +||+++  .|+++|++++++|++++++
T Consensus       350 iRis~~--~~~~~i~~~l~~l~~~l~~  374 (376)
T 3ezs_A          350 VRLALV--YDTPLLEKPLEIIETYREN  374 (376)
T ss_dssp             EEEECC--SCHHHHHHHHHHHHHHHCC
T ss_pred             EEEEEc--CCHHHHHHHHHHHHHHHHh
Confidence            999965  4999999999999998754

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=99.95  E-value=8.4e-27  Score=240.65  Aligned_cols=345  Identities=12%  Similarity=0.066  Sum_probs=227.5

Q ss_pred             CCCCEEEEccCCcccc-cCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHH
Q 010250           97 VNGKKYLDSLAGLWCT-ALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEA  174 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~-~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA  174 (514)
                      .+|+.++||.++..+. .++ .+|++.+++.+++++....+....+..+....+++.+.+.++ +.+.+++++++||++|
T Consensus        35 ~~g~~~i~l~~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a  113 (406)
T 1xi9_A           35 KKGIKVIRLNIGDPVKFDFQ-PPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEA  113 (406)
T ss_dssp             HTTCCCEECCCCCGGGTTCC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHH
T ss_pred             HcCCCEEEecCCCCCcCCCC-CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHH
Confidence            3688899998886532 566 579999999999876431111111122333444444443322 2345789999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEY  252 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  252 (514)
                      ++.+++.+.        .++++|++.+++||+....... .|...            ..++..  ..|.           
T Consensus       114 l~~~~~~l~--------~~gd~Vl~~~~~~~~~~~~~~~-~g~~~------------~~v~~~~~~~~~-----------  161 (406)
T 1xi9_A          114 LQLIFGALL--------DPGDEILVPGPSYPPYTGLVKF-YGGKP------------VEYRTIEEEDWQ-----------  161 (406)
T ss_dssp             HHHHHHHHC--------CTTCEEEEEESCCHHHHHHHHH-TTCEE------------EEEEEEGGGTSE-----------
T ss_pred             HHHHHHHhC--------CCCCEEEEcCCCCccHHHHHHH-cCCEE------------EEeecCCCcCCc-----------
Confidence            999998773        2357899999999987543322 22111            011110  0010           


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC
Q 010250          253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK  332 (514)
Q Consensus       253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~  332 (514)
                        .++++|++.+.    +++++|+++++++.+|.+. +++++++|.++|++||+++|+||+|+++.+.+.......++-.
T Consensus       162 --~d~~~l~~~l~----~~~~~v~i~~p~nptG~~~-~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~  234 (406)
T 1xi9_A          162 --PDIDDIRKKIT----DRTKAIAVINPNNPTGALY-DKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKD  234 (406)
T ss_dssp             --ECHHHHHHHCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSS
T ss_pred             --CCHHHHHHhhC----cCceEEEEECCCCCCCCCc-CHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCC
Confidence              11467777664    3577777877788888764 6689999999999999999999999988664333333333311


Q ss_pred             C-chh--chhhhhcCCcccceeEE--eCH----HHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHH
Q 010250          333 P-DLV--SFAKALSSAYMPIGAIL--VSP----EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIV  401 (514)
Q Consensus       333 p-Div--~~sK~l~gG~~pig~v~--~~~----~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~  401 (514)
                      . |++  +++|.++.+++++|+++  +++    ++++.+...       .... ++.++++++++.++|+...+  +++.
T Consensus       235 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~~-------~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~  306 (406)
T 1xi9_A          235 VPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRL-------ARIR-LCPNTPAQFAAIAGLTGPMDYLKEYM  306 (406)
T ss_dssp             SCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHHHH-------HHHT-CCSCSHHHHHHHHHHHSCCHHHHHHH
T ss_pred             ceEEEEeccccccCCCccEEEEEEEecCchhHHHHHHHHHHH-------HHhh-cCCCHHHHHHHHHHHhCCcHHHHHHH
Confidence            1 344  57899974338999999  888    898888641       1112 66788899988888863222  3456


Q ss_pred             HHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------
Q 010250          402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------  472 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------  472 (514)
                      ++++++++++.+.|+++   +.+..+.+. |.+..+.+..... .        ....+.+.|+ ++||++.++       
T Consensus       307 ~~~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~l~~~l~~~~gi~v~~g~~f~~~~  374 (406)
T 1xi9_A          307 KKLKERRDYIYKRLNEI---PGISTTKPQGAFYIFPKIEVGPW-K--------NDKEFVLDVLHNAHVLFVHGSGFGEYG  374 (406)
T ss_dssp             HHHHHHHHHHHHHHHTS---TTEECCCCCBSSEECCEECSCSC-S--------SHHHHHHHHHHHHCEECEEGGGGCGGG
T ss_pred             HHHHHHHHHHHHHHHhC---CCCeeecCCeeEEEEEecCccCC-C--------CHHHHHHHHHHhCCEEEeCchhcCCCC
Confidence            77888888888888765   222222233 4445556642100 0        1455777887 899999875       


Q ss_pred             CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          473 GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       473 g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      .+.+||+++  +++++|++++++|+++++++
T Consensus       375 ~~~lRis~~--~~~~~i~~~~~~l~~~l~~~  403 (406)
T 1xi9_A          375 AGHFRAVFL--PPIEILEEAMDRFEKFMKER  403 (406)
T ss_dssp             TTBEEEECC--SCHHHHHHHHHHHHHHHHHC
T ss_pred             CCEEEEEec--CCHHHHHHHHHHHHHHHHHH
Confidence            357999976  89999999999999998765

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=99.95  E-value=6.3e-27  Score=241.62  Aligned_cols=336  Identities=10%  Similarity=0.066  Sum_probs=224.4

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----Cc-CCC-CeEEEeCCh
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----TA-SKM-AKVFFTNSG  171 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~~-~~~-~~v~~~~sG  171 (514)
                      .|+++|||.+|..  .+| .+|.|.+++.+++++... . .+. ......++.+.+++++    +. .+. +++++++||
T Consensus        45 ~g~~~idl~~g~~--~~~-~~~~v~~a~~~~~~~~~~-~-~y~-~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~  118 (404)
T 2o1b_A           45 GPLPLINMAVGIP--DGP-TPQGIIDHFQKALTIPEN-Q-KYG-AFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGT  118 (404)
T ss_dssp             CSSCCEECCCCSC--SSC-CCHHHHHHHHHHTTCHHH-H-SCC-CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSH
T ss_pred             CCCCEEecCCcCC--CCC-CCHHHHHHHHHHHhCCCC-C-CCC-CCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCc
Confidence            5788999988864  577 689999999998864210 0 011 1122345555555554    42 122 689999999


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChh
Q 010250          172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEE  250 (514)
Q Consensus       172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  250 (514)
                      ++|++.+++.+.        .++++|++.+++||+........ |....            .++.. +.|..        
T Consensus       119 ~~al~~~~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~------------~v~~~~~~~~~--------  169 (404)
T 2o1b_A          119 KNGLVAVPTCVI--------NPGDYVLLPDPGYTDYLAGVLLA-DGKPV------------PLNLEPPHYLP--------  169 (404)
T ss_dssp             HHHHHHHHHHHC--------CTTCEEEEEESCCSSHHHHHHHT-TCEEE------------EEECCTTTCCC--------
T ss_pred             HHHHHHHHHHhc--------CCCCEEEEcCCCchhHHHHHHHC-CCEEE------------EeccCcccCcC--------
Confidence            999999998763        23478999999999976443322 21111            11110 01110        


Q ss_pred             HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee-cc-
Q 010250          251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DK-  328 (514)
Q Consensus       251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~-~~-  328 (514)
                           ++++|++.+.    +++++|+++..++++|.+. +.+++++|.++|++||+++|+||+|++|.+.|..... .. 
T Consensus       170 -----d~~~l~~~l~----~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~  239 (404)
T 2o1b_A          170 -----DWSKVDSQII----DKTKLIYLTYPNNPTGSTA-TKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASE  239 (404)
T ss_dssp             -----CGGGSCHHHH----HHEEEEEECSSCTTTCCCC-CHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGST
T ss_pred             -----CHHHHHHhhc----cCceEEEEcCCCCCCCccC-CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcC
Confidence                 1355666664    2467777776677778764 6789999999999999999999999988665532111 11 


Q ss_pred             --cCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHH
Q 010250          329 --YSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQV  404 (514)
Q Consensus       329 --~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~  404 (514)
                        ++....+.+++|.++.+++++|++++++++++.+..       .....+++.++++++++.++|+..++  ++..+++
T Consensus       240 ~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~  312 (404)
T 2o1b_A          240 NGKDVAIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKK-------YQTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVF  312 (404)
T ss_dssp             THHHHEEEEEESTTTTTCGGGCCEEEEECHHHHHHHHH-------HHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred             CCCCCEEEEEecchhccCchhheEeEecCHHHHHHHHH-------HHhhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence              122233457899997333899999999999988863       13345678899999999888876321  3456677


Q ss_pred             HHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCE
Q 010250          405 NKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDN  475 (514)
Q Consensus       405 ~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~  475 (514)
                      +++.+++.+.|+++ ...   .+.+. |.++++.+.+..           ....+.+.|+ ++||++.++       .+.
T Consensus       313 ~~~~~~l~~~L~~~-g~~---~~~~~~g~~~~~~~~~~~-----------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~  377 (404)
T 2o1b_A          313 KTRRDRFEAMLAKA-DLP---FVHAKGGIYVWLETPPGY-----------DSEQFEQFLVQEKSILVAPGKPFGENGNRY  377 (404)
T ss_dssp             HHHHHHHHHHHHHT-TCC---EECCCBSSEEEEECCTTC-----------CHHHHHHHHHHHHCEECEESGGGCGGGTTE
T ss_pred             HHHHHHHHHHHHhc-CCe---ecCCCcceEEEEeCCCCC-----------CHHHHHHHHHHHCCEEEeCchhhCcCCCCe
Confidence            78888888888775 222   22333 455777775311           1345777776 579999874       357


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +||+++.  ++++|++++++|++++++
T Consensus       378 iRis~~~--~~e~l~~~l~~l~~~l~~  402 (404)
T 2o1b_A          378 VRISLAL--DDQKLDEAAIRLTELAYL  402 (404)
T ss_dssp             EEEECCS--CTTHHHHHHHHHHGGGGG
T ss_pred             EEEEEcC--CHHHHHHHHHHHHHHHHh
Confidence            9999764  889999999999987754

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=99.95  E-value=2.5e-26  Score=240.47  Aligned_cols=345  Identities=12%  Similarity=0.108  Sum_probs=231.5

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc----CcCCCCeEEEeCChhHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF----TASKMAKVFFTNSGSEA  174 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~----~~~~~~~v~~~~sGseA  174 (514)
                      +..+|||.+|... ..++.++++.+++.+++++.......+. +.....+|.+.|++++    +..+.++|++++||++|
T Consensus        75 ~~~~i~l~~g~p~-~~~~p~~~v~~a~~~~l~~~~~~~~~Y~-~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~a  152 (448)
T 3aow_A           75 TSDIISLAGGLPN-PKTFPKEIIRDILVEIMEKYADKALQYG-TTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQA  152 (448)
T ss_dssp             TSSSEECCCCCCC-GGGSCHHHHHHHHHHHHHHSHHHHHSCC-CTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHH
T ss_pred             CCCcEeCCCCCCC-chhCCHHHHHHHHHHHHHhhhHHHhCCC-CCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHH
Confidence            4568999988764 3457889999999999876321000111 1222345555555554    32145799999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      ++.+++++.        ..++.|++.+++|++....... .|...            ..++....      +        
T Consensus       153 l~~~~~~l~--------~~Gd~Vlv~~p~y~~~~~~~~~-~g~~~------------~~v~~~~~------g--------  197 (448)
T 3aow_A          153 LDLIGRVFL--------NPGDIVVVEAPTYLAALQAFNF-YEPQY------------IQIPLDDE------G--------  197 (448)
T ss_dssp             HHHHHHHHC--------CTTCEEEEEESCCHHHHHHHHT-TCCEE------------EEEEEETT------E--------
T ss_pred             HHHHHHHHc--------CCCCEEEEeCCChHHHHHHHHH-cCCEE------------EEeccCCC------C--------
Confidence            999999873        2347899999999997543322 12111            11111000      0        


Q ss_pred             HHHHHHHHHHHHh--CCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc----eec
Q 010250          255 RLANNLEDLILKE--GPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF----GCD  327 (514)
Q Consensus       255 ~~~~~le~li~~~--~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~----~~~  327 (514)
                      .++++|++++...  ...++++|++.| .++.+|.+ .+.+++++|.++|++||+++|+||+|+++.+.|...    ..+
T Consensus       198 ~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~-~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~  276 (448)
T 3aow_A          198 MKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVT-MNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALD  276 (448)
T ss_dssp             ECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGC
T ss_pred             CCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCC-CCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcC
Confidence            1257788777521  113577775554 46667766 567899999999999999999999999886666421    222


Q ss_pred             ccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH--hh--ccHHHH
Q 010250          328 KYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY--KE--RNIVEQ  403 (514)
Q Consensus       328 ~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~--~~--~~~~~~  403 (514)
                      ..+...++.+|||.++.| +|+|++++++++++.+...       ....+++.++++++++.++|+..  .+  +++.+.
T Consensus       277 ~~~~vi~~~S~SK~~~~G-lriG~v~~~~~l~~~l~~~-------~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~  348 (448)
T 3aow_A          277 NEGRVIYLGTFSKILAPG-FRIGWMVGDPGIIRKMEIA-------KQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKF  348 (448)
T ss_dssp             TTSCEEEEEESTTTTCGG-GCCEEEEECHHHHHHHHHH-------HHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred             CCCCEEEEccchhhcccc-ccEEEEEeCHHHHHHHHHH-------HHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence            223334566899999855 8999999999999888642       23346677899999888888742  11  234566


Q ss_pred             HHHHHHHHHhhhhhc-cCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------
Q 010250          404 VNKIAPKFQDGVKAF-SDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---------  472 (514)
Q Consensus       404 ~~~~~~~l~~~L~~l-~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------  472 (514)
                      ++++.+++.+.|++. ..  .+..+. ..|+++++.+.+..           ....+.+.|.++||++.++         
T Consensus       349 ~~~~~~~l~~~L~~~~~~--g~~~~~p~~g~~~~v~~~~~~-----------~~~~l~~~l~~~gV~v~pg~~f~~~~~~  415 (448)
T 3aow_A          349 YKPRRDAMLEALEEFMPE--GVKWTKPEGGMFIWVTLPDGI-----------DSKKMLERAIKKGVAYVPGEAFYAHRDV  415 (448)
T ss_dssp             HHHHHHHHHHHHHHHCCT--TCEECCCSBSSEEEEECSTTC-----------CHHHHHHHHHHTTEECEEGGGGSTTCCC
T ss_pred             HHHHHHHHHHHHHHhCCC--CeEEeCCCccEEEEEEcCCCC-----------CHHHHHHHHHHCCcEEEcchhhcCCCCC
Confidence            667778888888763 21  122222 23677788875321           1456888999999999873         


Q ss_pred             CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          473 GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       473 g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      .+.+|++++. .++++|++++++|.+++++.
T Consensus       416 ~~~iRls~~~-~~~e~i~~~~~~L~~~l~~~  445 (448)
T 3aow_A          416 KNTMRLNFTY-VDEDKIMEGIKRLAETIKEE  445 (448)
T ss_dssp             CSEEEEECSS-SCTHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEeCC-CCHHHHHHHHHHHHHHHHHH
Confidence            2569999775 48999999999999998754

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=99.95  E-value=4.7e-27  Score=244.88  Aligned_cols=353  Identities=11%  Similarity=0.060  Sum_probs=230.3

Q ss_pred             EeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc------c---cccccCCchHHHHHHHHHHhcC-------
Q 010250           95 YDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY------H---SFWNRTTKPSLDLAKELLEMFT-------  158 (514)
Q Consensus        95 ~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~------~---~~~~~~~~~~~ela~~L~~~~~-------  158 (514)
                      ||.++|.+.++..|...+.++  +|.+.+++.++.....+.      .   ..+. ......+|++.|++++.       
T Consensus        31 y~~~~~p~~~i~lg~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~-~~~g~~~l~~~la~~~~~~~~~~~  107 (435)
T 3piu_A           31 YHEVHNTNGIIQMGLAENQLC--FDLLESWLAKNPEAAAFKKNGESIFAELALFQ-DYHGLPAFKKAMVDFMAEIRGNKV  107 (435)
T ss_dssp             CBTTTBTTSBEECSSCCCCSS--HHHHHHHHHHCTTGGGTEETTEECHHHHHHCC-CTTCCHHHHHHHHHHHHHHTTTSS
T ss_pred             CCcccCCCCeEEecccccccc--HHHHHHHHHhCccccccccccccccccccccC-CCCCcHHHHHHHHHHHHHhhCCCC
Confidence            778888777766676666666  688888887765532211      0   1111 12223577777777663       


Q ss_pred             cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC
Q 010250          159 ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH  238 (514)
Q Consensus       159 ~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~  238 (514)
                      ....+++++++||++|++.+++.++        ..++.|++.+++|++.........|.....            ++...
T Consensus       108 ~~~~~~v~~~~gg~~a~~~~~~~l~--------~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~------------~~~~~  167 (435)
T 3piu_A          108 TFDPNHLVLTAGATSANETFIFCLA--------DPGEAVLIPTPYYPGFDRDLKWRTGVEIVP------------IHCTS  167 (435)
T ss_dssp             CCCGGGEEEEEHHHHHHHHHHHHHC--------CTTCEEEEEESCCTTHHHHTTTTTCCEEEE------------EECCG
T ss_pred             CCCHHHEEEcCChHHHHHHHHHHhc--------CCCCeEEECCCccccHHHHHHHhcCCEEEE------------eeCCC
Confidence            0246799999999999999998874        334689999999987654332123322111            11110


Q ss_pred             --cccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechh
Q 010250          239 --YWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI  314 (514)
Q Consensus       239 --~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~  314 (514)
                        .|+             .++++|++++.+.  ...++++|++++.++++|.+. +.+.+++|+++|++||+++|+||+|
T Consensus       168 ~~~~~-------------~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~Dea~  233 (435)
T 3piu_A          168 SNGFQ-------------ITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTM-TRNELYLLLSFVEDKGIHLISDEIY  233 (435)
T ss_dssp             GGTSC-------------CCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred             ccCCc-------------CCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCC-CHHHHHHHHHHHHHcCCEEEEeccc
Confidence              011             0257777777642  223677888887788888755 5678999999999999999999999


Q ss_pred             cCccccccccee-ccc----CCC-----Cc----hhchhhhhc-CCcccceeEEe-CHHHHHHhhhccCCCCcccccCCC
Q 010250          315 CAFGRLGTMFGC-DKY----SIK-----PD----LVSFAKALS-SAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTY  378 (514)
Q Consensus       315 tG~gr~G~~~~~-~~~----gv~-----pD----iv~~sK~l~-gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~  378 (514)
                      +++++.|..+.. ...    ++.     +|    +.++||+++ +| +|+|++++ ++++.+.+..         +..++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~---------~~~~~  303 (435)
T 3piu_A          234 SGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPG-FRVGAIYSNDDMVVAAATK---------MSSFG  303 (435)
T ss_dssp             GGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGG-GCEEEEEESCHHHHHHHHH---------HGGGS
T ss_pred             cccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCc-eeEEEEEeCCHHHHHHHHH---------HhhcC
Confidence            988777754321 111    111     44    447899997 45 89999999 5677777753         22345


Q ss_pred             CCcHHHHHHHHHHHHHHh---h--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeee-eeEEEEEccCCCCCCCCCCcc
Q 010250          379 SGHPVSCAVAIEALKIYK---E--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEW  452 (514)
Q Consensus       379 ~~~pl~~aaa~aal~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~  452 (514)
                      ..++++++++.++++..+   +  ++..++++++.+++++.|+++   .+ ..+.+.+ +++++.+.......     ..
T Consensus       304 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g~-~~~~~~~g~~~~~~l~~~~~~~-----~~  374 (435)
T 3piu_A          304 LVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS---GI-SCLNGNAGLFCWVDMRHLLRSN-----TF  374 (435)
T ss_dssp             CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---TC-EECCCCSSSEEEEECGGGSSSS-----SH
T ss_pred             CCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CC-cccCCCeeEEEEEEcccccccC-----Cc
Confidence            567888888777776322   1  234667777778888888765   22 2223344 78888886532110     11


Q ss_pred             chHHHHHHHHHHC-CcEEEee-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          453 GIGAYFGAQCEKH-GMLVRVS-------GDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       453 ~~~~~~~~~l~~~-Gv~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      .....+...|+++ ||++.++       .+.+||+++.. |+++|++++++|+++++++.
T Consensus       375 ~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~-~~e~i~~~l~~l~~~l~~~~  433 (435)
T 3piu_A          375 EAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANL-PERTLDLAMQRLKAFVGEYY  433 (435)
T ss_dssp             HHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSS-CHHHHHHHHHHHHHHHHHHC
T ss_pred             hhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCC-CHHHHHHHHHHHHHHHHHHh
Confidence            1244577888777 9999863       25799998655 99999999999999987653

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=99.95  E-value=8.3e-26  Score=230.18  Aligned_cols=324  Identities=14%  Similarity=0.116  Sum_probs=223.2

Q ss_pred             EEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhc-----CcCCCCeEEEeCChhHHHHH
Q 010250          103 LDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMF-----TASKMAKVFFTNSGSEANDT  177 (514)
Q Consensus       103 lD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~-----~~~~~~~v~~~~sGseA~~~  177 (514)
                      |||.+|..  ++| .+|++.+++.+++++.......+  +.....++.+.+++++     .+.+.+++++++||++|++.
T Consensus        33 idl~~~~~--~~~-~~~~v~~a~~~~~~~~~~~~~~y--~~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~  107 (369)
T 3cq5_A           33 IRLNTNEN--PYP-PSEALVADLVATVDKIATELNRY--PERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQ  107 (369)
T ss_dssp             EECSSCCC--CSC-CCHHHHHHHHHHHHHHGGGTTSC--CCTTCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHH
T ss_pred             eeccCCCC--CCC-CCHHHHHHHHHHHHhcccccccC--CCccHHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHH
Confidence            89988853  567 78999999999987631111111  1112246667776662     12345789999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      +++.+.        .++++|++.+++||+........ |....            .++..+.|.             .++
T Consensus       108 ~~~~l~--------~~gd~Vl~~~~~y~~~~~~~~~~-g~~~~------------~v~~~~~~~-------------~d~  153 (369)
T 3cq5_A          108 LLQAFG--------GPGRTALGFQPSYSMHPILAKGT-HTEFI------------AVSRGADFR-------------IDM  153 (369)
T ss_dssp             HHHHHC--------STTCEEEEEESSCTHHHHHHHHT-TCEEE------------EEECCTTSS-------------CCH
T ss_pred             HHHHhc--------CCCCEEEEcCCChHHHHHHHHHc-CCEEE------------EecCCcCCC-------------CCH
Confidence            998763        23478999999999875433322 21111            111111111             014


Q ss_pred             HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee-cccC-CCCch
Q 010250          258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKYS-IKPDL  335 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~-~~~g-v~pDi  335 (514)
                      +++++.+.+.   ++++|+++++++++|.+.+    ++++.++|+.+++++|+||+|+++++....... +.++ ...++
T Consensus       154 ~~l~~~i~~~---~~~~v~~~~~~nptG~~~~----~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~  226 (369)
T 3cq5_A          154 DVALEEIRAK---QPDIVFVTTPNNPTGDVTS----LDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVS  226 (369)
T ss_dssp             HHHHHHHHHH---CCSEEEEESSCTTTCCCCC----HHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEE
T ss_pred             HHHHHHhhcc---CCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEE
Confidence            7777777642   3567788888888998876    788889999999999999999988643222221 2233 33445


Q ss_pred             hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhh
Q 010250          336 VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDG  414 (514)
Q Consensus       336 v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~  414 (514)
                      .+++|.++.+++|+|++++++++++.+...         ..+++.++++++++.++|+..+ -++..++++++.+++.+.
T Consensus       227 ~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~  297 (369)
T 3cq5_A          227 RTMSKAFDFAGGRLGYFVANPAFIDAVMLV---------RLPYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAAR  297 (369)
T ss_dssp             EESSSTTSCGGGCCEEEEECTHHHHHHHTT---------SCTTCSCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHH
T ss_pred             EechHhcCCcccceEEEEeCHHHHHHHHHc---------CCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence            678999973338999999999998888742         2356788999999999987532 145677888888899888


Q ss_pred             hhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--CCEEEEeCCCCCCHHHHHHH
Q 010250          415 VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--GDNIMMSPPFIMSPEEVDEL  492 (514)
Q Consensus       415 L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--g~~iRi~p~~~~t~e~id~~  492 (514)
                      |++. .   +...++.|.++.+.+..             ....+.+.|.++||++.++  .+.+|++++   +++|++++
T Consensus       298 L~~~-g---~~~~~~~~~~~~~~~~~-------------~~~~l~~~l~~~gi~v~~~~~~~~iRis~~---~~~~i~~~  357 (369)
T 3cq5_A          298 LEEL-G---YAVVPSESNFVFFGDFS-------------DQHAAWQAFLDRGVLIRDVGIAGHLRTTIG---VPEENDAF  357 (369)
T ss_dssp             HHHH-T---CEEECCSSSEEEEECCS-------------SHHHHHHHHHHTTEECBCCSCTTEEEEECC---CHHHHHHH
T ss_pred             HHhC-C---CEECCCCCeEEEEECCC-------------CHHHHHHHHHHCCEEEEECCCCCeEEEEeC---CHHHHHHH
Confidence            8774 2   22234567777776641             1345778899999999876  367999975   89999999


Q ss_pred             HHHHHHHHH
Q 010250          493 ISKYGKALK  501 (514)
Q Consensus       493 ~~~l~~~l~  501 (514)
                      +++|+++++
T Consensus       358 ~~~l~~~~~  366 (369)
T 3cq5_A          358 LDAAAEIIK  366 (369)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHh
Confidence            999988763

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=99.95  E-value=6.4e-26  Score=232.30  Aligned_cols=335  Identities=12%  Similarity=0.052  Sum_probs=222.1

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCC-eEEEeCChhHHHHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMA-KVFFTNSGSEANDTQ  178 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~-~v~~~~sGseA~~~A  178 (514)
                      .+|||.++..  .+| .+|.+.+++.++++.....+....+..+....+++.+.+.++ +.+.+ ++++++||++|++.+
T Consensus        31 ~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~  107 (386)
T 1u08_A           31 QAINLSQGFP--DFD-GPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAA  107 (386)
T ss_dssp             TCEECCCSSC--SSC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHH
T ss_pred             CeEEecCCCC--CCC-CCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHH
Confidence            4799988753  466 689999999999875211111111123333444444444343 23456 899999999999999


Q ss_pred             HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhHHHHHHH
Q 010250          179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  257 (514)
                      ++.+.        .++++|++.+++||+....... .|...            ..++... .|.             .++
T Consensus       108 ~~~~~--------~~gd~vl~~~p~~~~~~~~~~~-~g~~~------------~~v~~~~~~~~-------------~d~  153 (386)
T 1u08_A          108 ITALV--------RNGDEVICFDPSYDSYAPAIAL-SGGIV------------KRMALQPPHFR-------------VDW  153 (386)
T ss_dssp             HHHHC--------CTTCEEEEEESCCTTHHHHHHH-TTCEE------------EEEECCTTTCC-------------CCH
T ss_pred             HHHhC--------CCCCEEEEeCCCchhHHHHHHH-cCCEE------------EEeecCcccCc-------------CCH
Confidence            98763        2356899999999987543222 22111            1111110 011             114


Q ss_pred             HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc----eec-ccCCC
Q 010250          258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF----GCD-KYSIK  332 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~----~~~-~~gv~  332 (514)
                      ++|++.+.    +++++|+++..++.+|.+. +.+++++|.++|++||+++|+||+|++|.+.|...    ... .++..
T Consensus       154 ~~l~~~l~----~~~~~v~l~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~  228 (386)
T 1u08_A          154 QEFAALLS----ERTRLVILNTPHNPSATVW-QQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERA  228 (386)
T ss_dssp             HHHHHHCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTE
T ss_pred             HHHHHhhc----ccCEEEEEeCCCCCCCccC-CHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcE
Confidence            67776663    4577788877788888765 56899999999999999999999999887666421    111 23444


Q ss_pred             CchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHH
Q 010250          333 PDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPK  410 (514)
Q Consensus       333 pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~  410 (514)
                      ..+.+++|.++.+++++|++++++++++.+..       ..+..+++.++++++++.++|+..++  +++.++++++.++
T Consensus       229 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~  301 (386)
T 1u08_A          229 VAVSSFGKTYHMTGWKVGYCVAPAPISAEIRK-------VHQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDI  301 (386)
T ss_dssp             EEEEEHHHHTTCGGGCCEEEECCHHHHHHHHH-------HHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHH
T ss_pred             EEEecchhhcCCcccceEEEEcCHHHHHHHHH-------HHHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence            44568999998433899999999999888863       13335778888888888888875321  3567788888888


Q ss_pred             HHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee---------CCEEEEeC
Q 010250          411 FQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS---------GDNIMMSP  480 (514)
Q Consensus       411 l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~---------g~~iRi~p  480 (514)
                      +.+.|+++ ...+.  ....|.++++++..... .        ....+.+.|+ ++||++.++         .+.+||++
T Consensus       302 l~~~L~~~-g~~~~--~~~~g~~~~~~~~~~~~-~--------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~  369 (386)
T 1u08_A          302 LVNALNES-RLEIL--PCEGTYFLLVDYSAVST-L--------DDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCF  369 (386)
T ss_dssp             HHHHTTSS-SCEEC--CCCBSSEEEEECTTTCC-S--------CHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEEC
T ss_pred             HHHHHHHC-CCeec--CCCceEEEEEecCCCCC-C--------CHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEE
Confidence            88888765 22111  11235677787753210 0        1345777776 689999863         24699997


Q ss_pred             CCCCCHHHHHHHHHHHHH
Q 010250          481 PFIMSPEEVDELISKYGK  498 (514)
Q Consensus       481 ~~~~t~e~id~~~~~l~~  498 (514)
                      +  .++++|++++++|++
T Consensus       370 ~--~~~~~i~~~~~~l~~  385 (386)
T 1u08_A          370 A--KKESTLLAAAERLRQ  385 (386)
T ss_dssp             C--SCHHHHHHHHHHHTT
T ss_pred             c--CCHHHHHHHHHHHhh
Confidence            5  589999999998864

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=99.95  E-value=7e-26  Score=232.84  Aligned_cols=343  Identities=13%  Similarity=0.052  Sum_probs=226.6

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-cc---cc-ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChh
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HS---FW-NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGS  172 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~---~~-~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGs  172 (514)
                      +|+.+++|..+.    .|+.+|++++|+.+++++.... +.   .+ ..+.+...++++.|+++++..+.++++|++||+
T Consensus        20 ~g~~~i~l~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t   95 (406)
T 1kmj_A           20 NGLPLAYLDSAA----SAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTT   95 (406)
T ss_dssp             TTEECEECCTTT----CCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHH
T ss_pred             CCCceEEecCCc----cCCCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChh
Confidence            555444443331    2468999999999999764211 10   00 013455678999999998532357899999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCCh
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE  249 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (514)
                      +|++.+++.++.++   . .++++|++.+++||+.....   ....|...            ..++.+..+.        
T Consensus        96 ~a~~~~~~~~~~~~---~-~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~------------~~~~~~~~~~--------  151 (406)
T 1kmj_A           96 EGINLVANSWGNSN---V-RAGDNIIISQMEHHANIVPWQMLCARVGAEL------------RVIPLNPDGT--------  151 (406)
T ss_dssp             HHHHHHHHHTHHHH---C-CTTCEEEEETTCCGGGTHHHHHHHHHHTCEE------------EEECBCTTSC--------
T ss_pred             HHHHHHHHHhhhhc---C-CCCCEEEEecccchHHHHHHHHHHHhCCCEE------------EEEecCCCCC--------
Confidence            99999999874321   1 23578999999999864221   11112111            1111111110        


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceeccc
Q 010250          250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY  329 (514)
Q Consensus       250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~  329 (514)
                           .++++|++.+.    +++++|+++++++.+|.+.+    +++|.++|++||+++|+||+|+ +|..  .+...  
T Consensus       152 -----~d~~~l~~~l~----~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~~~~-~g~~--~~~~~--  213 (406)
T 1kmj_A          152 -----LQLETLPTLFD----EKTRLLAITHVSNVLGTENP----LAEMITLAHQHGAKVLVDGAQA-VMHH--PVDVQ--  213 (406)
T ss_dssp             -----BCGGGHHHHCC----TTEEEEEEESBCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTT-TTTS--CCCHH--
T ss_pred             -----cCHHHHHHHhc----cCCeEEEEeCCCccccCcCC----HHHHHHHHHHcCCEEEEEchhh-cCCC--CCccc--
Confidence                 01356666663    46889999999999998887    9999999999999999999997 4443  11222  


Q ss_pred             CCCCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCc--------------ccccCCCCCcHHHHHHHH-HHH
Q 010250          330 SIKPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS--------------FSHGFTYSGHPVSCAVAI-EAL  392 (514)
Q Consensus       330 gv~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~--------------~~~~~t~~~~pl~~aaa~-aal  392 (514)
                      ...+|++  +++|.++.  .++|++++++++++.+.........              .....+.+.+++.+++++ +++
T Consensus       214 ~~~~d~~~~s~~K~~g~--~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al  291 (406)
T 1kmj_A          214 ALDCDFYVFSGHKLYGP--TGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAAL  291 (406)
T ss_dssp             HHTCSEEEEEGGGTTSC--TTCEEEEECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHH
T ss_pred             ccCCCEEEEEchhccCC--CCcEEEEEeHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHH
Confidence            2347876  58898843  3389999999998887632100000              001122344556666555 788


Q ss_pred             HHHhhc---cHHHHHHHHHHHHHhhhhhccCCCceeEEEe--eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250          393 KIYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG--TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM  467 (514)
Q Consensus       393 ~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g--~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv  467 (514)
                      +.+.+.   ++.++++++.+++.+.|+++.   .+.....  .|.++.+.+...            ....+.+.|.++||
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~gi  356 (406)
T 1kmj_A          292 EYVSALGLNNIAEYEQNLMHYALSQLESVP---DLTLYGPQNRLGVIAFNLGKH------------HAYDVGSFLDNYGI  356 (406)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHTTST---TEEEESCTTCCSEEEEEETTC------------CHHHHHHHHHHTTE
T ss_pred             HHHHHcCHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCCcCCEEEEEECCC------------CHHHHHHHHhhCCc
Confidence            877643   567788888899998887752   2222223  577777776421            03457788999999


Q ss_pred             EEEeeC-------------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          468 LVRVSG-------------DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       468 ~~~~~g-------------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      .+.++.             +.+|++++..+|++|+++++++|+++++.+
T Consensus       357 ~v~~g~~~~~~~~~~~g~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~l  405 (406)
T 1kmj_A          357 AVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRLL  405 (406)
T ss_dssp             ECEEECTTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeccccchHHHHhcCCCCeEEEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence            998642             579999999899999999999999988653

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=99.95  E-value=3.2e-26  Score=235.40  Aligned_cols=337  Identities=11%  Similarity=0.090  Sum_probs=223.8

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc----cccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChh
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF----YHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGS  172 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~----~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGs  172 (514)
                      +|+.+|||.+|   .+....+|+|.+|+.+++++...    .+....+..+....+++.+.+.++ +.+.+++++++||+
T Consensus        33 ~~~~~i~l~~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~  109 (398)
T 3ele_A           33 GKENVYDFSIG---NPSIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAA  109 (398)
T ss_dssp             CGGGCEECCSC---CCCSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHH
T ss_pred             CCCCeEEeecC---CCCCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHH
Confidence            35789999887   33334789999999999876321    111111223444555555555443 23568999999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhH
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEE  251 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  251 (514)
                      +|++.+++.+.       .+++++|++.+++|++........+. ..            ..++.. +.|.          
T Consensus       110 ~al~~~~~~l~-------~~g~d~vl~~~p~~~~~~~~~~~~g~-~~------------~~v~~~~~~~~----------  159 (398)
T 3ele_A          110 ASLSICFRALT-------SDAYDEFITIAPYFPEYKVFVNAAGA-RL------------VEVPADTEHFQ----------  159 (398)
T ss_dssp             HHHHHHHHHHC-------CSTTCEEEEESSCCTHHHHHHHHTTC-EE------------EEECCCTTTSS----------
T ss_pred             HHHHHHHHHHc-------CCCCCEEEEeCCCchhhHHHHHHcCC-EE------------EEEecCCcCCc----------
Confidence            99999999873       13337899999999987543332221 11            111111 0011          


Q ss_pred             HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh------cCCEEEEechhcCcccccccce
Q 010250          252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK------YDILFIADEVICAFGRLGTMFG  325 (514)
Q Consensus       252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~------~gillI~DEv~tG~gr~G~~~~  325 (514)
                         .++++|++.+.    +++.+|++...++++|.+. +.+.+++|.++|++      ||+++|+||+|++|.+.|....
T Consensus       160 ---~d~~~l~~~l~----~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~  231 (398)
T 3ele_A          160 ---IDFDALEERIN----AHTRGVIINSPNNPSGTVY-SEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVP  231 (398)
T ss_dssp             ---CCHHHHHHTCC----TTEEEEEECSSCTTTCCCC-CHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCC
T ss_pred             ---CCHHHHHHHhC----cCCCEEEEcCCCCCCCCCC-CHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcC
Confidence               01466766653    3567777766678888765 55779999999999      9999999999999877774322


Q ss_pred             --ecccCCCCchhchhhhhc-CCcccceeEEeCHHHHH------HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh
Q 010250          326 --CDKYSIKPDLVSFAKALS-SAYMPIGAILVSPEVSE------VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK  396 (514)
Q Consensus       326 --~~~~gv~pDiv~~sK~l~-gG~~pig~v~~~~~i~~------~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~  396 (514)
                        .+.++....+.++||.++ .| +++|++++++++++      .+..      ......+++.+++++.++.+.++   
T Consensus       232 ~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~a~~~~l~---  301 (398)
T 3ele_A          232 FVTKYYDNTLVCYSYSKSLSLPG-ERIGYVLVPDEVYDKAELYAAVCG------AGRALGYVCAPSLFQKMIVKCQG---  301 (398)
T ss_dssp             CGGGTCSSEEEEEESTTTSSCTT-TCCEEEECCTTSTTHHHHHHHHHH------HHHHTTCCCSCHHHHHHHTTCTT---
T ss_pred             ChHhhcCCeEEEEehhhcCCCcc-ceeEEEEEcchhhhHHHHHHHHHH------HhhhccccCCCHHHHHHHHHHhc---
Confidence              233333333447899998 55 89999999987433      2221      01122356677777777665554   


Q ss_pred             hccHHHHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---
Q 010250          397 ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---  472 (514)
Q Consensus       397 ~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---  472 (514)
                      +....++++++++++.+.|+++ ....   +... |.++++.+....            ...+.+.|.++||++.++   
T Consensus       302 ~~~~~~~~~~~~~~l~~~L~~~-g~~~---~~~~~~~~~~~~~~~~~------------~~~~~~~l~~~gi~v~~g~~~  365 (398)
T 3ele_A          302 ATGDINAYKENRDLLYEGLTRI-GYHC---FKPDGAFYMFVKALEDD------------SNAFCEKAKEEDVLIVAADGF  365 (398)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHHH-TCCE---ECCSBSSEEEEECSSSC------------HHHHHHHHHTTTEECEESGGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHc-CCee---cCCCeeEEEEEEcCCCC------------HHHHHHHHHHCCEEEeCcccc
Confidence            3446788999999999999876 2222   2223 444677664221            456778899999999875   


Q ss_pred             --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          473 --GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       473 --g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                        .+.+||++  .+++++|++++++|+++++++
T Consensus       366 ~~~~~iRis~--~~~~e~i~~~l~~l~~~l~~~  396 (398)
T 3ele_A          366 GCPGWVRISY--CVDREMIKHSMPAFEKIYKKY  396 (398)
T ss_dssp             TCTTEEEEEC--CSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEe--cCCHHHHHHHHHHHHHHHHHh
Confidence              36799995  479999999999999998764

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=99.95  E-value=2.6e-26  Score=237.39  Aligned_cols=342  Identities=13%  Similarity=0.063  Sum_probs=223.5

Q ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCC-eEEEeCChhHHHHHHH
Q 010250          102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMA-KVFFTNSGSEANDTQV  179 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~-~v~~~~sGseA~~~Al  179 (514)
                      +|||.++.  ..+| .+|.+.+++.+++++....+....+..+....+++.+.+.++. ...+ ++++++||++|++.++
T Consensus        27 ~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~  103 (411)
T 2o0r_A           27 AVNLGQGF--PDED-GPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAV  103 (411)
T ss_dssp             CEESSCSS--CSSC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHH
T ss_pred             eeeccCcC--CCCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHH
Confidence            78998875  3466 6899999999999763111111111223334444444443331 2456 8999999999999999


Q ss_pred             HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC---cccCCCCCCChhHHHHHH
Q 010250          180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH---YWRYAHPGETEEEYSTRL  256 (514)
Q Consensus       180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~  256 (514)
                      +.+.        .++++|++.+++||+...... ..|...            ..++...   .|.             .+
T Consensus       104 ~~~~--------~~gd~Vl~~~~~y~~~~~~~~-~~g~~~------------~~v~~~~~~~~~~-------------~d  149 (411)
T 2o0r_A          104 LGLV--------EPGSEVLLIEPFYDSYSPVVA-MAGAHR------------VTVPLVPDGRGFA-------------LD  149 (411)
T ss_dssp             HHHC--------CTTCEEEEEESCCTTHHHHHH-HTTCEE------------EEEECEEETTEEE-------------CC
T ss_pred             HHhc--------CCCCEEEEeCCCcHhHHHHHH-HcCCEE------------EEeeccccccCCC-------------CC
Confidence            8773        234789999999999753322 222211            1111100   011             11


Q ss_pred             HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceecc----cCC
Q 010250          257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDK----YSI  331 (514)
Q Consensus       257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~----~gv  331 (514)
                      +++|++.+.    +++++|+++.+++++|.+. +.+++++|.++|++||+++|+||+|+++++.|.. .....    .+.
T Consensus       150 ~~~l~~~l~----~~~~~v~l~~~~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~  224 (411)
T 2o0r_A          150 ADALRRAVT----PRTRALIINSPHNPTGAVL-SATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAER  224 (411)
T ss_dssp             HHHHHHHCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGG
T ss_pred             HHHHHHhhc----cCceEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCC
Confidence            467777664    3577888888888888764 5789999999999999999999999988776642 22222    222


Q ss_pred             CCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHH
Q 010250          332 KPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAP  409 (514)
Q Consensus       332 ~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~  409 (514)
                      ...+.+++|.++.+++|+|++++++++++.+...       ....+++.++++++++.++|+..++  +++.++++++.+
T Consensus       225 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  297 (411)
T 2o0r_A          225 TITISSAAKMFNCTGWKIGWACGPAELIAGVRAA-------KQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRD  297 (411)
T ss_dssp             EEEEEEHHHHTTCTTTCEEEEECCHHHHHHHHHH-------HHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             EEEEeechhhcCCccceEEEEeeCHHHHHHHHHH-------HhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence            3334578999983338999999999998887631       2334667778888888888875322  346777888888


Q ss_pred             HHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee----------------
Q 010250          410 KFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS----------------  472 (514)
Q Consensus       410 ~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~----------------  472 (514)
                      ++.+.|+++ ...+.  ....|.++++.+..... .        ....+.+.|+ ++||++.++                
T Consensus       298 ~l~~~L~~~-g~~~~--~~~~g~~~~~~~~~~~~-~--------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~  365 (411)
T 2o0r_A          298 RLAAGLTEI-GFAVH--DSYGTYFLCADPRPLGY-D--------DSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQAD  365 (411)
T ss_dssp             HHHHHHHHH-TCEEC--CCCBSSEEEEECGGGTC-C--------CHHHHHHHHHHHHSEECEEGGGGSCCC--------C
T ss_pred             HHHHHHHHc-CCEec--CCCeeEEEEEecCCCCC-C--------CHHHHHHHHHHhCCEEEcChhhhCCCcccccccccc
Confidence            888888875 22221  12235677888754210 0        1345777776 679998753                


Q ss_pred             --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250          473 --GDNIMMSPPFIMSPEEVDELISKYGKALKATEER  506 (514)
Q Consensus       473 --g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~  506 (514)
                        .+.+||++.  .++++|++++++|++++++....
T Consensus       366 ~~~~~iRis~~--~~~e~i~~~~~~l~~~~~~~~~~  399 (411)
T 2o0r_A          366 VWNHLVRFTFC--KRDDTLDEAIRRLSVLAERPATG  399 (411)
T ss_dssp             CGGGCEEEECC--SCHHHHHHHHHHHGGGGC-----
T ss_pred             CCCCeEEEEec--CCHHHHHHHHHHHHHHHhccCcC
Confidence              235999964  58999999999999987765543

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=99.94  E-value=4e-26  Score=231.70  Aligned_cols=326  Identities=14%  Similarity=0.099  Sum_probs=222.9

Q ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250           97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND  176 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~  176 (514)
                      .+|+.+|||.++.  +.++ .+|+|++|+.++++......  ...+.....++.+.|+++++ .+.+++++++||++|++
T Consensus        23 ~~~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~--~~y~~~~~~~lr~~la~~~g-~~~~~i~~t~g~~~al~   96 (360)
T 3hdo_A           23 PDIASWIKLNTNE--NPYP-PSPEVVKAILEELGPDGAAL--RIYPSASSQKLREVAGELYG-FDPSWIIMANGSDEVLN   96 (360)
T ss_dssp             SCCTTSEECSSCC--CSSC-CCHHHHHHHHHHHTTTCGGG--GSCCCSSCHHHHHHHHHHHT-CCGGGEEEESSHHHHHH
T ss_pred             ccccceeeccCCC--CCCC-CCHHHHHHHHHHHhcccchh--hcCCCCchHHHHHHHHHHhC-cCcceEEEcCCHHHHHH
Confidence            4778999998875  3455 78999999999997642111  11122334788999999884 45679999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL  256 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (514)
                      .+++...        ..+++|++.+++|++........+....             .++..+.|.               
T Consensus        97 ~~~~~l~--------~~gd~Vl~~~p~~~~~~~~~~~~g~~~~-------------~v~~~~~~~---------------  140 (360)
T 3hdo_A           97 NLIRAFA--------AEGEEIGYVHPSYSYYGTLAEVQGARVR-------------TFGLTGDFR---------------  140 (360)
T ss_dssp             HHHHHHC--------CTTCEEEEESSSCTHHHHHHHHHTCEEE-------------EECBCTTSS---------------
T ss_pred             HHHHHHh--------CCCCEEEEcCCChHHHHHHHHHCCCEEE-------------EeeCCCCCC---------------
Confidence            9998763        2347899999999987543333222111             111111111               


Q ss_pred             HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh
Q 010250          257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV  336 (514)
Q Consensus       257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv  336 (514)
                      +   ++++....+   .+++++..++++|.+.+    +++|+++|+++|+++|+||+|++|+..+.....+.++....+.
T Consensus       141 ~---~~l~~~~~~---~~v~i~~p~nptG~~~~----~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~  210 (360)
T 3hdo_A          141 I---AGFPERYEG---KVFFLTTPNAPLGPSFP----LEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTR  210 (360)
T ss_dssp             B---TTCCSSBCS---SEEEEESSCTTTCCCCC----HHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEE
T ss_pred             H---HHHHhhcCC---CEEEEeCCCCCCCCCcC----HHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEe
Confidence            0   111111121   25555556788888887    7899999999999999999999874332221223333333445


Q ss_pred             chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHHHHHhhh
Q 010250          337 SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAPKFQDGV  415 (514)
Q Consensus       337 ~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~~l~~~L  415 (514)
                      +++|.++.+++++|++++++++++.+...         ..+++.++++++++.++|+..+. ++..++++++.+++.+.|
T Consensus       211 s~sK~~g~~G~r~G~~~~~~~~~~~~~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L  281 (360)
T 3hdo_A          211 TLSKSYSLAGMRIGLAIARPEVIAALDKI---------RDHYNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTEL  281 (360)
T ss_dssp             ESTTTTSCTTSCCEEEECCHHHHHHHHHH---------SCSCCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchHhhcCCccceeeEeeCHHHHHHHHHh---------CCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence            78999874338999999999999988742         13577899999999999885221 345677888888888888


Q ss_pred             hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-----CEEEEeCCCCCCHHHHH
Q 010250          416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMSPEEVD  490 (514)
Q Consensus       416 ~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-----~~iRi~p~~~~t~e~id  490 (514)
                      +++ .   +...++.|.++.+.+...            ....+.+.|.++||++++.+     +.+|++.   .+++|++
T Consensus       282 ~~~-~---~~~~~~~~~~~~~~~~~~------------~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~---~~~~e~~  342 (360)
T 3hdo_A          282 RSI-G---YDVIPSQGNYLFATPPDR------------DGKRVYDGLYARKVLVRHFSDPLLAHGMRISI---GTREEME  342 (360)
T ss_dssp             HHT-T---CEECCCSSSEEEEECTTC------------CHHHHHHHHHHTTEECBCCCSTTTTTSEEEEC---CCHHHHH
T ss_pred             HHC-C---CEEcCCCccEEEEECCCC------------CHHHHHHHHHHCCEEEEECCCCCCCCEEEEEc---CCHHHHH
Confidence            775 2   122345677777765421            14567889999999998754     5799994   3999999


Q ss_pred             HHHHHHHHHHHH
Q 010250          491 ELISKYGKALKA  502 (514)
Q Consensus       491 ~~~~~l~~~l~~  502 (514)
                      +++++|++..+.
T Consensus       343 ~l~~al~~~~~~  354 (360)
T 3hdo_A          343 QTLAALKEIGEG  354 (360)
T ss_dssp             HHHHHHHHHHC-
T ss_pred             HHHHHHHHHhcc
Confidence            999999887654

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=99.94  E-value=6.2e-26  Score=236.21  Aligned_cols=348  Identities=11%  Similarity=0.032  Sum_probs=233.0

Q ss_pred             eeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcCc-----CCC
Q 010250           89 SEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFTA-----SKM  162 (514)
Q Consensus        89 ~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~~-----~~~  162 (514)
                      +....+++.+|+.+|||.+|..  .++ .+|+|++|+.+++.... ..+.    ......++.+.+++++..     ...
T Consensus        33 ~~~~~~~~~~g~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~~~y~----~~~g~~~lr~~la~~~~~~~g~~~~~  105 (437)
T 3g0t_A           33 ALVTNLEKATGTKFCRMEMGVP--GLP-APQIGIETEIQKLREGVASIYP----NLDGLPELKQEASRFAKLFVNIDIPA  105 (437)
T ss_dssp             HHHHHHHHHHTCCCEECCCCSC--CSC-CCHHHHHHHHHHHHHTGGGSCC----CTTCCHHHHHHHHHHHHHHHCCCCCG
T ss_pred             HHHHHHHHhcCCCEEeccCcCC--CCC-CCHHHHHHHHHHHhCCcCcCCC----CCCChHHHHHHHHHHHHHhhCCCCCc
Confidence            3445566778999999998863  455 78999999999987522 1111    111124555555555421     245


Q ss_pred             CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCcc--EEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC-CCc
Q 010250          163 AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK--KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC-PHY  239 (514)
Q Consensus       163 ~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~--~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~~~  239 (514)
                      +++++++||++|++.+++.+...     .+ ++  +|++.+++|++........+....             .++. ++.
T Consensus       106 ~~i~~t~g~t~al~~~~~~l~~~-----~~-gd~~~Vl~~~p~~~~~~~~~~~~g~~~~-------------~v~~~~~~  166 (437)
T 3g0t_A          106 RACVPTVGSMQGCFVSFLVANRT-----HK-NREYGTLFIDPGFNLNKLQCRILGQKFE-------------SFDLFEYR  166 (437)
T ss_dssp             GGEEEESHHHHHHHHHHHHHTTS-----CT-TCSCCEEEEESCCHHHHHHHHHHTCCCE-------------EEEGGGGC
T ss_pred             ccEEEeCCHHHHHHHHHHHHhcC-----CC-CCccEEEEeCCCcHhHHHHHHHcCCEEE-------------EEeecCCC
Confidence            78999999999999999876200     13 34  799999999987544433222111             0111 000


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                                  + ..++++|++.+..  ++..+.+++.| ++++|.+. +.+.+++|.++|++||+++|+||+|+++..
T Consensus       167 ------------~-~~d~~~l~~~l~~--~~~~~v~l~~p-~nptG~~~-~~~~l~~i~~~a~~~~~~li~De~~~~~~~  229 (437)
T 3g0t_A          167 ------------G-EKLREKLESYLQT--GQFCSIIYSNP-NNPTWQCM-TDEELRIIGELATKHDVIVIEDLAYFGMDF  229 (437)
T ss_dssp             ------------T-THHHHHHHHHHTT--TCCCEEEEESS-CTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCCT
T ss_pred             ------------C-ccCHHHHHHHHhc--CCceEEEEeCC-CCCCCCcC-CHHHHHHHHHHHHHCCcEEEEEcchhhccc
Confidence                        0 1235778777732  22334445566 67777665 567799999999999999999999997754


Q ss_pred             cccc---------ceecc-cCCCCchhchhhhhc-CCcccceeEEeCHHHHH-H-----------------hhhccCCCC
Q 010250          320 LGTM---------FGCDK-YSIKPDLVSFAKALS-SAYMPIGAILVSPEVSE-V-----------------IHSQSNTLG  370 (514)
Q Consensus       320 ~G~~---------~~~~~-~gv~pDiv~~sK~l~-gG~~pig~v~~~~~i~~-~-----------------l~~~~~~~~  370 (514)
                      .+..         ..... .+....+.+++|.++ .| +++|++++++++++ .                 +.       
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  301 (437)
T 3g0t_A          230 RKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAG-QRIGVLMISGKLYEREYPDLEESFGRLRFGEALSS-------  301 (437)
T ss_dssp             TSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGG-GCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHT-------
T ss_pred             CCCcCcccccchhhccCCCCCcEEEEEcCccCCCCcc-ceeEEEEECHHHhhhhhhcccccccccchhHHHHH-------
Confidence            4321         11111 222122447899988 45 89999999999988 6                 53       


Q ss_pred             cccccCCCCCcHHHHHHHHHHHHHHh-----hccHHHHHHHHHHHHHhhhhhccCCCce----eEEE-eeeeeEEEEEcc
Q 010250          371 SFSHGFTYSGHPVSCAVAIEALKIYK-----ERNIVEQVNKIAPKFQDGVKAFSDSPII----GEIR-GTGLILGTEFAD  440 (514)
Q Consensus       371 ~~~~~~t~~~~pl~~aaa~aal~~~~-----~~~~~~~~~~~~~~l~~~L~~l~~~~~~----~~v~-g~g~~~~i~~~~  440 (514)
                      ......+++.++++++++.++|+...     -++..++++++.+++.+.|+++ .....    .... ..|.++++.+..
T Consensus       302 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~  380 (437)
T 3g0t_A          302 SALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN-GFNIVYDKDGNEPLADGFYFTVGYKG  380 (437)
T ss_dssp             THHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEEESSCEETTEECCSSSEEEEEETT
T ss_pred             HHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCEEeccccCCCCCceeEEEEEecCC
Confidence            22344577889999999999998765     2456788888889999988876 21111    0023 456777777751


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-------CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          441 NKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------DNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       441 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-------~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      .            ....+.+.|.++||.+.+..       +.+|++++. .|+++|++++++|+++++
T Consensus       381 ~------------~~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~~-~~~e~i~~~~~~l~~~~~  435 (437)
T 3g0t_A          381 M------------DSSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTSL-LPESQFPDLEKRLQMLNA  435 (437)
T ss_dssp             C------------CHHHHHHHHHHTTEECEESTTTTCCCTTCEEEECSS-SCGGGHHHHHHHHHHHHH
T ss_pred             C------------CHHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEec-CCHHHHHHHHHHHHHHHh
Confidence            1            14568899999999998764       679999874 499999999999998764

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=99.94  E-value=1.7e-25  Score=228.97  Aligned_cols=332  Identities=14%  Similarity=0.062  Sum_probs=218.1

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhh----c-CC
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA----L-GR  191 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~----~-~~  191 (514)
                      .+|++.+++.+++......+..+....+...+++++++++++ .+.+++++++||++|++.+++.++.....    . ..
T Consensus        42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~  120 (397)
T 3f9t_A           42 VLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLN-NKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSK  120 (397)
T ss_dssp             CCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHHTT-CTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             CcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhC-CCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccC
Confidence            579999999999876432222221234556678899999874 34678999999999999999988643110    0 11


Q ss_pred             CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCc
Q 010250          192 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPET  271 (514)
Q Consensus       192 ~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~  271 (514)
                      .++++|++.+++|++........ |...            ..++....++             .++++|++.+.+.   +
T Consensus       121 ~~gd~vl~~~~~~~~~~~~~~~~-g~~~------------~~v~~~~~~~-------------~d~~~l~~~i~~~---~  171 (397)
T 3f9t_A          121 NEHPKIIVPITAHFSFEKGREMM-DLEY------------IYAPIKEDYT-------------IDEKFVKDAVEDY---D  171 (397)
T ss_dssp             CSSCEEEEETTCCTHHHHHHHHH-TCEE------------EEECBCTTSS-------------BCHHHHHHHHHHS---C
T ss_pred             CCCeEEEECCcchhHHHHHHHHc-Ccee------------EEEeeCCCCc-------------CCHHHHHHHHhhc---C
Confidence            23578888888888754322222 2111            1111111111             1257888888642   4


Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc--ccccc---------cceecccCCCCchhchhh
Q 010250          272 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF--GRLGT---------MFGCDKYSIKPDLVSFAK  340 (514)
Q Consensus       272 ~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~--gr~G~---------~~~~~~~gv~pDiv~~sK  340 (514)
                      +++|+++++++.+|.+.+    +++|.++|++||+++|+||+|+++  +.+|.         .+.... ++...+.+++|
T Consensus       172 ~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~K  246 (397)
T 3f9t_A          172 VDGIIGIAGTTELGTIDN----IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSL-GVDSITIDPHK  246 (397)
T ss_dssp             CCEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGG-TCSEEECCTTT
T ss_pred             CeEEEEECCCCCCCCCCC----HHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccc-cCCeEEEcccc
Confidence            567777777888888876    999999999999999999999864  33332         222333 55445557789


Q ss_pred             hhcCCcccceeEEeCHH-HHHHhhhccCCCCc----ccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhh
Q 010250          341 ALSSAYMPIGAILVSPE-VSEVIHSQSNTLGS----FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV  415 (514)
Q Consensus       341 ~l~gG~~pig~v~~~~~-i~~~l~~~~~~~~~----~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L  415 (514)
                      .+++| .++|+++++++ +.+.+.........    ...+.+.+.+++++.++++.+....-++..++++++++++.+.|
T Consensus       247 ~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L  325 (397)
T 3f9t_A          247 MGHCP-IPSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKL  325 (397)
T ss_dssp             TTCCC-SSCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCC-CCceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            88776 69999988655 44444221110000    00123334466677777666654333567788889999999999


Q ss_pred             hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--CEEEEeCCCCCCHHHHHHHH
Q 010250          416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEEVDELI  493 (514)
Q Consensus       416 ~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--~~iRi~p~~~~t~e~id~~~  493 (514)
                      +++ ....+..  ..+.++.+.+.+              ...+.+.|.++||++.++.  +.+||+++..+|++++++++
T Consensus       326 ~~~-g~~~~~~--~~~~~~~~~~~~--------------~~~~~~~l~~~gi~v~~~~~~~~~Ri~~~~~~~~e~i~~~~  388 (397)
T 3f9t_A          326 KEN-NFKPVIE--PILNIVAIEDED--------------YKEVCKKLRDRGIYVSVCNCVKALRIVVMPHIKREHIDNFI  388 (397)
T ss_dssp             HHT-TCCBSSC--CSSSEEEEECTT--------------HHHHHHHHHHTTCBCEECSSSSEEEEECCTTCCHHHHHHHH
T ss_pred             HHC-CCEEEcC--CCccEEEEEeCC--------------HHHHHHHHHhCCeEEeccCCCCEEEEEEcCCCCHHHHHHHH
Confidence            887 4333322  334555555432              3458889999999998875  68999999889999999999


Q ss_pred             HHHHHHHH
Q 010250          494 SKYGKALK  501 (514)
Q Consensus       494 ~~l~~~l~  501 (514)
                      ++|+++++
T Consensus       389 ~~l~~~l~  396 (397)
T 3f9t_A          389 EILNSIKR  396 (397)
T ss_dssp             HHHHHHC-
T ss_pred             HHHHHhhC
Confidence            99998764

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=99.94  E-value=3.9e-26  Score=232.86  Aligned_cols=299  Identities=18%  Similarity=0.187  Sum_probs=210.8

Q ss_pred             chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250          144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK  223 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~  223 (514)
                      ....++.+.+++++...+.+++++++||++|++.+++.+.        .++++|++.+++|++........ |....   
T Consensus        63 ~g~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~--------~~gd~Vl~~~~~~~~~~~~~~~~-g~~~~---  130 (375)
T 3op7_A           63 EGSPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLI--------EPGDHVISLYPTYQQLYDIPKSL-GAEVD---  130 (375)
T ss_dssp             TCCHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHC--------CTTCEEEEEESSCTHHHHHHHHT-TCEEE---
T ss_pred             CChHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhc--------CCCCEEEEeCCCchhHHHHHHHc-CCEEE---
Confidence            3357899999998744466899999999999999998763        34578999999999865332222 21110   


Q ss_pred             CCCCCCcccccCCC--CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          224 FDLPAPFVLHTDCP--HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       224 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                               .++.+  ..|.             .++++|++.+.    +++++|+++++++++|.+. +++++++|.++|
T Consensus       131 ---------~v~~~~~~~~~-------------~d~~~l~~~l~----~~~~~v~~~~~~nptG~~~-~~~~l~~i~~la  183 (375)
T 3op7_A          131 ---------LWQIEEENGWL-------------PDLEKLRQLIR----PTTKMICINNANNPTGAVM-DRTYLEELVEIA  183 (375)
T ss_dssp             ---------EEEEEGGGTTE-------------ECHHHHHHHCC----TTCCEEEEESSCTTTCCCC-CHHHHHHHHHHH
T ss_pred             ---------EEeccccCCCC-------------CCHHHHHHhhc----cCCeEEEEcCCCCCCCCCC-CHHHHHHHHHHH
Confidence                     01100  0000             01467777664    3567888888888888765 678899999999


Q ss_pred             HhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCc
Q 010250          302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH  381 (514)
Q Consensus       302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~  381 (514)
                      ++||+++|+||+|+++++.+.....+.++..+++.++||.++.+++++|++++++++++.+..       ..+..+++.+
T Consensus       184 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~-------~~~~~~~~~~  256 (375)
T 3op7_A          184 SEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLSKTYSLPGIRIGWVAANHQVTDILRD-------YRDYTMICAG  256 (375)
T ss_dssp             HTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEEEESSSSSSCGGGCCEEEECCHHHHHHHTT-------TGGGTTSCCC
T ss_pred             HHcCCEEEEEcccccccccCCCchhhhcCCEEEEeEChhhcCCcccceEEEEeCHHHHHHHHH-------HHhhhccCCC
Confidence            999999999999998876643333455666677778999997333899999999999998863       2445678889


Q ss_pred             HHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHH
Q 010250          382 PVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYF  458 (514)
Q Consensus       382 pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~  458 (514)
                      +++++++.++++..++  ++..++++++.+.+.+.|++.   +.+..+... |.+..+.+....           ....+
T Consensus       257 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~  322 (375)
T 3op7_A          257 VFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEE---PLVSYIRPAVVSTSFVKIAVDM-----------PMEDF  322 (375)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHC---TTEEECCCSSSSCEEEEECCSS-----------CHHHH
T ss_pred             cHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhC---CCceEecCCCeEEEeEEcCCCC-----------CHHHH
Confidence            9999999888875432  234555677777777777664   333333333 334555554321           13456


Q ss_pred             HHHH-HHCCcEEEeeC-----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          459 GAQC-EKHGMLVRVSG-----DNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       459 ~~~l-~~~Gv~~~~~g-----~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      ...+ .++||.+.++.     +.+|++  +..++++|++++++|+++++++.
T Consensus       323 ~~~ll~~~gi~v~~g~~~~~~~~iRi~--~~~~~~~i~~~l~~l~~~l~~~~  372 (375)
T 3op7_A          323 CLQLLQEHGVLLVPGNRFERDGYVRLG--FACEQETLIKGLEKLSQFLRRFD  372 (375)
T ss_dssp             HHHHHHHHCEECEEGGGGTCTTEEEEC--CCSCHHHHHHHHHHHHHHHGGGC
T ss_pred             HHHHHHhCCEEEeChhhhCCCCeEEEE--ecCCHHHHHHHHHHHHHHHHHHh
Confidence            6666 58899998753     679999  56777999999999999987653

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=99.94  E-value=1.2e-25  Score=232.34  Aligned_cols=348  Identities=12%  Similarity=0.104  Sum_probs=230.1

Q ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-c-c--cccc-CCchHHHHHHHHHHhcCcCCCCeEEEeCCh
Q 010250           97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-H-S--FWNR-TTKPSLDLAKELLEMFTASKMAKVFFTNSG  171 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~-~--~~~~-~~~~~~ela~~L~~~~~~~~~~~v~~~~sG  171 (514)
                      .+|+.+++|.++..    ++.+|+|.+++.+++++.... + .  .++. ..+...++.+.|+++++..+.+++++++||
T Consensus        24 ~~g~~~i~l~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~   99 (420)
T 1t3i_A           24 INGHPLVYLDNAAT----SQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNA   99 (420)
T ss_dssp             ETTEECEECBTTTC----CCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSH
T ss_pred             cCCCceEEecCCcc----CCCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCCh
Confidence            36788888876632    478999999999998763211 1 0  0110 134567889999999853245789999999


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccce--e-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCC
Q 010250          172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL--I-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET  248 (514)
Q Consensus       172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~--~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (514)
                      ++|++.+++.++...   . .++++|++.+++||+...  . .....|...            ..++.+..+.       
T Consensus       100 t~a~~~~~~~~~~~~---~-~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~-------  156 (420)
T 1t3i_A          100 TEAINLVAYSWGMNN---L-KAGDEIITTVMEHHSNLVPWQMVAAKTGAVL------------KFVQLDEQES-------  156 (420)
T ss_dssp             HHHHHHHHHHTHHHH---C-CTTCEEEEETTCCGGGTHHHHHHHHHHCCEE------------EEECBCTTSS-------
T ss_pred             HHHHHHHHHHhhhcc---c-CCCCEEEECcchhHHHHHHHHHHHHhcCcEE------------EEeccCCCCC-------
Confidence            999999999873210   1 234789999999999531  1 111112111            1111111111       


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecc
Q 010250          249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK  328 (514)
Q Consensus       249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~  328 (514)
                            .++++|++.+.    +++++|+++++++.+|.+.+    +++|.++|++||+++|+||+|+ +|...  +....
T Consensus       157 ------~d~~~l~~~l~----~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~~~~~--~~~~~  219 (420)
T 1t3i_A          157 ------FDLEHFKTLLS----EKTKLVTVVHISNTLGCVNP----AEEIAQLAHQAGAKVLVDACQS-APHYP--LDVQL  219 (420)
T ss_dssp             ------BCHHHHHHHCC----TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHTTCEEEEECTTT-TTTSC--CCHHH
T ss_pred             ------cCHHHHHHhhC----CCceEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEEhhhc-cCCcc--Cchhh
Confidence                  11466776664    46889999999999998887    9999999999999999999997 44331  12222


Q ss_pred             cCCCCchhch--hhhhcCCcccceeEEeCHHHHHHhhhccCCCCc-------------ccccCCCCCcHHHHHHHHH-HH
Q 010250          329 YSIKPDLVSF--AKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS-------------FSHGFTYSGHPVSCAVAIE-AL  392 (514)
Q Consensus       329 ~gv~pDiv~~--sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~-------------~~~~~t~~~~pl~~aaa~a-al  392 (514)
                      +  .+|++++  +|.++.  .++|++++++++++.+.........             .....+.+.+++.++++++ ++
T Consensus       220 ~--~~di~~~s~sK~~~~--~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al  295 (420)
T 1t3i_A          220 I--DCDWLVASGHKMCAP--TGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAV  295 (420)
T ss_dssp             H--TCSEEEEEGGGTTSC--TTCEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHH
T ss_pred             c--CCCEEEEehhhhcCC--CceEEEEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHH
Confidence            3  3788765  495543  3489999999998887642110000             0011233456666666655 77


Q ss_pred             HHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEE---eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250          393 KIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR---GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG  466 (514)
Q Consensus       393 ~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~---g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G  466 (514)
                      +.+.+   +++.++.+++.+++.+.|+++....+.....   +.|.++.+.+...            ....+.+.|.++|
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~g  363 (420)
T 1t3i_A          296 DYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGL------------HASDVATMVDQDG  363 (420)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTB------------CHHHHHHHHHTTT
T ss_pred             HHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEECCC------------CHHHHHHHHHHCC
Confidence            87765   4567888888999999988752222211111   2477888876421            1345778899999


Q ss_pred             cEEEee-------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          467 MLVRVS-------------GDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       467 v~~~~~-------------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      |.+.++             .+.+|++++..+|++|+++++++|+++++.+.
T Consensus       364 i~v~~~~~~~~~~~~~~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~~  414 (420)
T 1t3i_A          364 IAIRSGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRFFS  414 (420)
T ss_dssp             EECBCSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHTC
T ss_pred             eEEeeccccchHHHHhcCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            999876             35799999988999999999999999987654

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=99.94  E-value=2.7e-26  Score=234.84  Aligned_cols=337  Identities=14%  Similarity=0.097  Sum_probs=228.0

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccc----ccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHS----FWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE  173 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~----~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse  173 (514)
                      ++..|+|..      ..|+.+|+|++|+.+++........    .+....+...++.+.|+++++ .+.+++++++||++
T Consensus        15 ~~~i~l~~~------~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g-~~~~~v~~~~g~t~   87 (390)
T 1elu_A           15 ANKTYFNFG------GQGILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFN-VDPNTITITDNVTT   87 (390)
T ss_dssp             TTSEECCTT------TCCCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTT-SCGGGEEEESSHHH
T ss_pred             CCeEEecCC------ccCCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcC-CCHHHEEEeCChHH
Confidence            456677742      3678899999999999875321110    111112556789999999984 34568999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCC
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGET  248 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  248 (514)
                      |++.+++.++      . .++++|++.+++||+.....   ....|...            ..++.+  ..+.       
T Consensus        88 a~~~~~~~~~------~-~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~~~-------  141 (390)
T 1elu_A           88 GCDIVLWGLD------W-HQGDEILLTDCEHPGIIAIVQAIAARFGITY------------RFFPVAATLNQG-------  141 (390)
T ss_dssp             HHHHHHHHSC------C-CTTCEEEEETTCCHHHHHHHHHHHHHHCCEE------------EEECCGGGSSSS-------
T ss_pred             HHHHHHhCCC------C-CCCCEEEEecCcccHHHHHHHHHHHHhCcEE------------EEEcCCCCCCcc-------
Confidence            9999998762      1 33578999999999865321   11112111            111111  0110       


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH----hcCCEEEEechhcCcccccccc
Q 010250          249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK----KYDILFIADEVICAFGRLGTMF  324 (514)
Q Consensus       249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~----~~gillI~DEv~tG~gr~G~~~  324 (514)
                            .++++|++.+.    +++++|+++++++++|.+.+    +++|.++|+    +||+++|+||+|+ +|..+   
T Consensus       142 ------~d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~~~li~Dea~~-~g~~~---  203 (390)
T 1elu_A          142 ------DAAAVLANHLG----PKTRLVILSHLLWNTGQVLP----LAEIMAVCRRHQGNYPVRVLVDGAQS-AGSLP---  203 (390)
T ss_dssp             ------CHHHHHHTTCC----TTEEEEEEESBCTTTCCBCC----HHHHHHHHHHCCSSSCCEEEEECTTT-BTTBC---
T ss_pred             ------chHHHHHHhcC----CCceEEEEeccccCCceecC----HHHHHHHHhhhhhhcCcEEEEEcccc-cCCcC---
Confidence                  12455655553    46889999999999998887    999999999    9999999999997 65442   


Q ss_pred             eecccCCCCchhc--hhhhhcCCcccceeEEeCHHHHHHhhhccCCCCc---------c------cccCCCCCcHHHHHH
Q 010250          325 GCDKYSIKPDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS---------F------SHGFTYSGHPVSCAV  387 (514)
Q Consensus       325 ~~~~~gv~pDiv~--~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~---------~------~~~~t~~~~pl~~aa  387 (514)
                       .+.....+|+++  ++|.+.|| .++|++++++++++.+.......+.         +      ....+.+.+++++++
T Consensus       204 -~~~~~~~~d~~~~s~~K~~~~~-~g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  281 (390)
T 1elu_A          204 -LDFSRLEVDYYAFTGHKWFAGP-AGVGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAG  281 (390)
T ss_dssp             -CCTTTSCCSEEEEESSSTTCCC-TTCEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHH
T ss_pred             -CChhhcCCCEEEccccccccCC-CceEEEEECHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHH
Confidence             122234578876  88977776 6899999999988776532100000         0      011123457788888


Q ss_pred             HHHHHHHHhhcc----HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH
Q 010250          388 AIEALKIYKERN----IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE  463 (514)
Q Consensus       388 a~aal~~~~~~~----~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~  463 (514)
                      +.++++.+.+.+    +.++++++++++.+.|+++.+..+....++.|.++.+.+....           ....+.+.|.
T Consensus       282 ~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~  350 (390)
T 1elu_A          282 LLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSPL-----------GHRAIVQKLE  350 (390)
T ss_dssp             HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECSSS-----------CHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEEEcCCCC-----------CHHHHHHHHH
Confidence            888888776533    5778888888998888875222111111356778888774211           1456788899


Q ss_pred             HCCcEEEeeC--CEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250          464 KHGMLVRVSG--DNIMMSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       464 ~~Gv~~~~~g--~~iRi~p~~~~t~e~id~~~~~l~~  498 (514)
                      ++||.+.++.  +.|||+++..+|++|+++++++|++
T Consensus       351 ~~gi~v~~~~~~~~iRis~~~~~~~~~i~~~~~~l~~  387 (390)
T 1elu_A          351 EQRIYLRTIADPDCIRACCHYITDEEEINHLLARLAD  387 (390)
T ss_dssp             HTTEECEEETTTTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred             HCCEEEEecCCCCeEEEecccCCCHHHHHHHHHHHHh
Confidence            9999999875  6899999999999999999999875

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=99.94  E-value=4e-26  Score=237.40  Aligned_cols=346  Identities=10%  Similarity=0.072  Sum_probs=226.9

Q ss_pred             CEEEEccCCcccccCCCCCHHH--HHHHHHHHhc-CCccccccccCCchHHHHHHHHHHhc----CcCCCCe---EEEeC
Q 010250          100 KKYLDSLAGLWCTALGGSEPRL--VAAATAQLNT-LPFYHSFWNRTTKPSLDLAKELLEMF----TASKMAK---VFFTN  169 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v--~~A~~~~l~~-~~~~~~~~~~~~~~~~ela~~L~~~~----~~~~~~~---v~~~~  169 (514)
                      +.++||.+|... .+|+ +|.+  ++++.+++.. ....+   . ......++.+.|++++    .+.+.++   +++++
T Consensus        47 ~~~i~l~~g~~~-~~~~-~~~~~~~~a~~~~~~~~~~~~y---~-~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~  120 (430)
T 2x5f_A           47 STTYNATIGMAT-NKDG-KMFASSLDAMFNDLTPDEIFPY---A-PPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTN  120 (430)
T ss_dssp             TCSEECCCSSCE-ETTE-ECCCHHHHTTBSSCCGGGTSSC---C-CTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEES
T ss_pred             CCcEEeeeeecc-CCCC-chhhHHHHHHHHhcCccccccc---C-CCCCCHHHHHHHHHHHhccCcccCCCccceEEEcC
Confidence            468999888643 5885 6766  7777766643 11111   1 1112456666666665    1234567   99999


Q ss_pred             ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCC
Q 010250          170 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGET  248 (514)
Q Consensus       170 sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  248 (514)
                      ||++|++.+++.+.        ..+++|++.+++||+.........|....            .++... .|.       
T Consensus       121 g~~~al~~~~~~l~--------~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~------------~~~~~~~~~~-------  173 (430)
T 2x5f_A          121 ALTHGLSLVGDLFV--------NQDDTILLPEHNWGNYKLVFNTRNGANLQ------------TYPIFDKDGH-------  173 (430)
T ss_dssp             HHHHHHHHHHHHHC--------CTTCEEEEESSCCTHHHHHHTTTTCCEEE------------EECCBCTTSC-------
T ss_pred             CchHHHHHHHHHHh--------CCCCEEEEcCCcCccHHHHHHHhcCCeEE------------EEeccCccCC-------
Confidence            99999999998763        23478999999999975433320121111            111110 011       


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh-----cCCEEEEechhcCccccccc
Q 010250          249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK-----YDILFIADEVICAFGRLGTM  323 (514)
Q Consensus       249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~-----~gillI~DEv~tG~gr~G~~  323 (514)
                            .++++|++.+.....+..++++++| ++++|.+ .+.+++++|.++|++     ||+++|+||+|++|.+.|..
T Consensus       174 ------~d~~~l~~~l~~~~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~  245 (430)
T 2x5f_A          174 ------YTTDSLVEALQSYNKDKVIMILNYP-NNPTGYT-PTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVY  245 (430)
T ss_dssp             ------BCSHHHHHHHHHCCSSEEEEEECSS-CTTTCCC-CCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSC
T ss_pred             ------cCHHHHHHHHHhcCCCCEEEEEcCC-CCCCCCc-CCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCccc
Confidence                  0147788887653323344455666 7777865 567899999999999     99999999999998776652


Q ss_pred             c-ee--cccCCCCc------hhchhhhhcCCcccceeEEe---CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHH
Q 010250          324 F-GC--DKYSIKPD------LVSFAKALSSAYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEA  391 (514)
Q Consensus       324 ~-~~--~~~gv~pD------iv~~sK~l~gG~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aa  391 (514)
                      + ..  ...+..++      +.++||.++.+++++|++++   ++++++.+....   ....++.+++.++++++++.++
T Consensus       246 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~a~~~~  322 (430)
T 2x5f_A          246 TQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKV---KGLIRSNISSGPLPTQSAVKHV  322 (430)
T ss_dssp             CSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHH---HHHHHTTTSSCCHHHHHHHHHH
T ss_pred             chHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHHHH---hhhhhcccCCCChHHHHHHHHH
Confidence            2 21  22233444      33789999743389999999   999988886421   0011225778899999999999


Q ss_pred             HH-H---Hhh-ccHHHHHHHHHHHHHhhhhhcc-CCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH
Q 010250          392 LK-I---YKE-RNIVEQVNKIAPKFQDGVKAFS-DSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK  464 (514)
Q Consensus       392 l~-~---~~~-~~~~~~~~~~~~~l~~~L~~l~-~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~  464 (514)
                      |+ .   .++ ++..++++++.+++.+.|++.. ..+ +....+. |.++++.+. ..           ....+.+.|.+
T Consensus       323 l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g-~~~~~~~~g~~~~~~~~-~~-----------~~~~~~~~l~~  389 (430)
T 2x5f_A          323 LKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHSH-WQAYDFNSGYFMAIKVH-DV-----------DPEALRKHLID  389 (430)
T ss_dssp             HHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTTT-EEECCCCBSSEEEEEES-SS-----------CHHHHHHHHHH
T ss_pred             HccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC-ceeeCCCceEEEEeCCC-CC-----------CHHHHHHHHHH
Confidence            98 3   222 2367777888888888887321 122 2222333 455778775 11           14457788887


Q ss_pred             -CCcEEEee-CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          465 -HGMLVRVS-GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       465 -~Gv~~~~~-g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                       +||++.++ .+.+||+++. .++++|++++++|+++++++
T Consensus       390 ~~gi~v~~g~~~~iRis~~~-~~~e~i~~~~~~l~~~l~~~  429 (430)
T 2x5f_A          390 KYSIGVIALNATDIRIAFSC-VEKDDIPHVFDSIAKAIDDL  429 (430)
T ss_dssp             HHCEECEECSSSEEEEEGGG-SCGGGHHHHHHHHHHHHHHH
T ss_pred             hCCEEEecCCCCeEEEEEec-CCHHHHHHHHHHHHHHHHhc
Confidence             99999986 4579999875 59999999999999998654

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.94  E-value=1e-25  Score=230.59  Aligned_cols=337  Identities=13%  Similarity=0.098  Sum_probs=222.9

Q ss_pred             EEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChh
Q 010250           93 YVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGS  172 (514)
Q Consensus        93 ~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGs  172 (514)
                      .++|++++.+.++...++..+++|..++..+.+                     .+++++++++++. . +.++|++||+
T Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~---------------------~~~~~~l~~~~~~-~-~~v~~~~sgt   61 (379)
T 3ke3_A            5 LRQDIDPNGLLEYSVVYTDRALNHMSKAFQEVM---------------------NDLLSNLKTVYNA-E-AAVIIPGSGT   61 (379)
T ss_dssp             ---CCSTTSCCCCCSSCCTTSCCTTSHHHHHHH---------------------HHHHHHHHHHHTC-S-EEEEEESCHH
T ss_pred             hhccCCHHHHHHHHHhccCCCCCCCCHHHHHHH---------------------HHHHHHHHHHhCC-C-CEEEEcCChh
Confidence            578899999999987776667888877655332                     3455667777643 2 6789999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec-CCCccccCCCCCCCCcccccCCCC----cccCCCCCC
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL-SGLPALHQKFDLPAPFVLHTDCPH----YWRYAHPGE  247 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  247 (514)
                      +|++++++.+         .++++||+++++|||.+...+.. .+.+.          .+..++.+.    .|+.+.   
T Consensus        62 ~a~~~~~~~~---------~~gd~vi~~~~~~~~~~~~~~~~~~g~~~----------~~~~~~~~~~g~~~~~~~~---  119 (379)
T 3ke3_A           62 YGMEAVARQL---------TIDEDCLIIRNGWFSYRWTQILEKGKFAK----------SSTVLTAERTEDTEAPKPF---  119 (379)
T ss_dssp             HHHHHHHHHH---------CTTCEEEEEECSHHHHHHHHHHHHHCCSS----------EEEEEECEESSCCSSCCCE---
T ss_pred             HHHHHHHHhC---------CCCCeEEEEeCCchhHHHHHHHHHhCCCC----------ceEEEeccccccccccCCC---
Confidence            9999988654         24578999999999975433221 11100          001111110    011000   


Q ss_pred             ChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceec
Q 010250          248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCD  327 (514)
Q Consensus       248 ~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~  327 (514)
                           ...+++++++++.+.   ++++|++..+++.+|.+. +.+++++|+++|++||+++|+||+|+  |  +..+..+
T Consensus       120 -----~~~d~~~l~~~i~~~---~~~~v~~~~~~~~~G~~~-~~~~l~~i~~~~~~~~~~li~D~~~~--g--~~~~~~~  186 (379)
T 3ke3_A          120 -----APVDIETAVAKIKED---KSAIVYAPHVETSSGIIL-SEEYIKALSEAVHSVGGLLVIDCIAS--G--CVWLDMK  186 (379)
T ss_dssp             -----ECCCHHHHHHHHHHH---TCSEEEEESEETTTTEEC-CHHHHHHHHHHHHHTTCEEEEECTTC--T--TCCCCHH
T ss_pred             -----CCCCHHHHHHHHhhc---CCcEEEEEeecCCCceeC-CHHHHHHHHHHHHHcCCEEEEEeccc--C--Ccccccc
Confidence                 001257788887542   345677777777778665 57899999999999999999999997  3  3355566


Q ss_pred             ccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCccc--------------cc---CCCCCcHHHHHHHHH
Q 010250          328 KYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS--------------HG---FTYSGHPVSCAVAIE  390 (514)
Q Consensus       328 ~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~--------------~~---~t~~~~pl~~aaa~a  390 (514)
                      .++++..+.+++|+|+|+ .++|++++++++++.+.....  ..+.              .+   ++++.++.++++..+
T Consensus       187 ~~~~d~~~~s~~K~l~~~-~g~g~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~a  263 (379)
T 3ke3_A          187 ELGIDVLISAPQKGWSST-PCAGLVMLSAAAIKKVESTES--NCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRD  263 (379)
T ss_dssp             HHTCSEEEECTTTTTCSC-CCEEEEEECHHHHHHHHTCCC--SCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHH
T ss_pred             ccCCCEEEecchhhcCCC-CceEEEEECHHHHHhhhcCCC--CceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHH
Confidence            667655555667999876 578999999999988864211  1111              11   234667888888889


Q ss_pred             HHHHHhhc---cHHHHHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250          391 ALKIYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG  466 (514)
Q Consensus       391 al~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G  466 (514)
                      +|+.+.++   ++.++.+++.+++++.|+++ ...+.... ...+.+..+.+.+.             ...+...|.++|
T Consensus       264 al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~~~~~~-------------~~~~~~~L~~~G  329 (379)
T 3ke3_A          264 AILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVSYTERD-------------DMHKGSAFAEAG  329 (379)
T ss_dssp             HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEEECSCH-------------HHHSSHHHHHTT
T ss_pred             HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEEEEccCCc-------------chHHHHHHHHCC
Confidence            99988764   56788888999999999876 22222110 01122233322110             111256788999


Q ss_pred             cEEEee----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          467 MLVRVS----------GDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       467 v~~~~~----------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      |++.++          ++.||++++..+|++||++++++|+++++++.
T Consensus       330 i~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~  377 (379)
T 3ke3_A          330 LQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL  377 (379)
T ss_dssp             CCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred             eEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence            998764          46799999999999999999999999987664

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=99.94  E-value=3.3e-25  Score=229.62  Aligned_cols=361  Identities=13%  Similarity=0.059  Sum_probs=226.4

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC--ccccccccCCchHHHHHHHHHHhcCc-CCC-CeEEEeCChhHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP--FYHSFWNRTTKPSLDLAKELLEMFTA-SKM-AKVFFTNSGSEAN  175 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~--~~~~~~~~~~~~~~ela~~L~~~~~~-~~~-~~v~~~~sGseA~  175 (514)
                      ..+|||..|.  ..++ .+|.|++++.+++....  ..+....+..+....+++.+.+.++. ... +++++++||++|+
T Consensus        28 ~~~i~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~  104 (422)
T 3fvs_A           28 HDVVNLGQGF--PDFP-PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGAL  104 (422)
T ss_dssp             SCCEECCCSS--CSSC-CCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHH
T ss_pred             CCceEeCCCC--CCCC-CCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHH
Confidence            4679998875  3343 68999999999987632  11111111233444555555544321 223 5899999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      +.+++.+.        .++++|++.+++||+........+. ..............-..+....|+             .
T Consensus       105 ~~~~~~~~--------~~gd~vl~~~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~~G~~~~~~~~~-------------~  162 (422)
T 3fvs_A          105 FTAFQALV--------DEGDEVIIIEPFFDCYEPMTMMAGG-RPVFVSLKPGPIQNGELGSSSNWQ-------------L  162 (422)
T ss_dssp             HHHHHHHC--------CTTCEEEEEESCCTTHHHHHHHTTC-EEEEEECBCCCCCSSSCCBGGGSB-------------C
T ss_pred             HHHHHHHc--------CCCCEEEEcCCCchhhHHHHHHcCC-EEEEEecccccccccccccccCCC-------------C
Confidence            99998773        3456899999999997543332221 111000000000000000000111             0


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccC----
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYS----  330 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~g----  330 (514)
                      ++++|++.+.    +++++|+++..++++|.+. +++.+++|.++|++||+++|+||+|++|.+.|... ....+.    
T Consensus       163 d~~~l~~~~~----~~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~  237 (422)
T 3fvs_A          163 DPMELAGKFT----SRTKALVLNTPNNPLGKVF-SREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWE  237 (422)
T ss_dssp             CHHHHHTTCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGG
T ss_pred             CHHHHHhhcC----CCceEEEECCCCCCCCcCC-CHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccC
Confidence            1456665553    3677888888888888776 67889999999999999999999999988777522 222222    


Q ss_pred             CCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH-------hh--ccHH
Q 010250          331 IKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY-------KE--RNIV  401 (514)
Q Consensus       331 v~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~-------~~--~~~~  401 (514)
                      ...++.++||.++.+++++|++++++++++.+..       ..+..+++.++++++++.++|+..       ++  +++.
T Consensus       238 ~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  310 (422)
T 3fvs_A          238 RTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRT-------VHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFP  310 (422)
T ss_dssp             GEEEEEEHHHHHTCGGGCCEEEECCHHHHHHHHH-------HHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHH
T ss_pred             cEEEEecchhccCCccceEEEEEeCHHHHHHHHH-------HHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHH
Confidence            1233447899997333899999999999988863       234567888999999999988751       11  2356


Q ss_pred             HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCC--CCCCCCCccchHHHHHHHHH-HCCcEEEee------
Q 010250          402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKS--PNEPFPPEWGIGAYFGAQCE-KHGMLVRVS------  472 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~------  472 (514)
                      ++++++.+++.+.|+++   ++.......|.++++++.....  ...+..........+...++ ++||++.++      
T Consensus       311 ~~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~  387 (422)
T 3fvs_A          311 QAMQRCRDHMIRSLQSV---GLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSV  387 (422)
T ss_dssp             HHHHHHHHHHHHHHHTT---TCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCH
T ss_pred             HHHHHHHHHHHHHHHHc---CCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCC
Confidence            67777888888888765   2222233456677777653110  00000000011334566554 579998863      


Q ss_pred             ------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          473 ------GDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       473 ------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                            .+.+||+  +..|+++|++++++|++++++
T Consensus       388 ~~~~~~~~~iRis--~~~~~e~i~~~l~~l~~~l~~  421 (422)
T 3fvs_A          388 PHQKHFDHYIRFC--FVKDEATLQAMDEKLRKWKVE  421 (422)
T ss_dssp             HHHTTSCSEEEEE--CCCCHHHHHHHHHHHHHHHHC
T ss_pred             cCCCCCCCeEEEE--ecCCHHHHHHHHHHHHHHHhh
Confidence                  2569999  566999999999999998754

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=99.94  E-value=4.2e-25  Score=223.16  Aligned_cols=326  Identities=10%  Similarity=0.036  Sum_probs=209.7

Q ss_pred             EeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEE
Q 010250           87 EKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVF  166 (514)
Q Consensus        87 ~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~  166 (514)
                      .+++|.+++|.+|+++|||.++.  ++++ .+|+|.+++.+++.....+      +.....++.+.|+++++ .+.++++
T Consensus         2 ~~~~g~~~~~~~g~~~id~~~~~--~~~~-~~~~v~~a~~~~~~~~~~y------~~~~~~~lr~~la~~~~-~~~~~i~   71 (350)
T 3fkd_A            2 IFGHGDEGITPLSSEIVNFSTTV--WTDG-DKDHLEKHLVENLNCIRHY------PEPDAGTLRQMLAKRNS-VDNNAIL   71 (350)
T ss_dssp             --------------CCEECSCCS--CCCS-CCHHHHHHHHHTGGGGGSC------CCTTCHHHHHHHHHHTT-CCGGGEE
T ss_pred             cccccchHhhhccccEEEccCCC--CCCC-CCHHHHHHHHHhHhHHhcC------CCCcHHHHHHHHHHHhC-cCHHHEE
Confidence            46889999999999999999885  4566 7899999999887443222      22223688999999874 4557999


Q ss_pred             EeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC-CCcccCCCC
Q 010250          167 FTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC-PHYWRYAHP  245 (514)
Q Consensus       167 ~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  245 (514)
                      +++||++|++.+++.+         . +++|++.+++|++........+. ..            ..++. +..      
T Consensus        72 ~t~g~~~al~~~~~~l---------~-gd~Vi~~~p~~~~~~~~~~~~g~-~~------------~~v~~~~~~------  122 (350)
T 3fkd_A           72 VTNGPTAAFYQIAQAF---------R-GSRSLIAIPSFAEYEDACRMYEH-EV------------CFYPSNEDI------  122 (350)
T ss_dssp             EESHHHHHHHHHHHHT---------T-TCEEEEEESCCHHHHHHHHHTTC-EE------------EEEETTSCG------
T ss_pred             EcCCHHHHHHHHHHHH---------C-CCEEEEeCCCcHHHHHHHHHcCC-eE------------EEEecCCcc------
Confidence            9999999999999876         2 56899999999987533332221 11            11111 000      


Q ss_pred             CCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC-CEEEEechhcCcccccccc
Q 010250          246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD-ILFIADEVICAFGRLGTMF  324 (514)
Q Consensus       246 ~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g-illI~DEv~tG~gr~G~~~  324 (514)
                          +        .+       ..+++.+|+++..++++|.+.+    ++++.++++.++ .++|+||+|++|+..+...
T Consensus       123 ----~--------~~-------~~~~~~~v~i~~p~nptG~~~~----~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~  179 (350)
T 3fkd_A          123 ----G--------EA-------DFSNMDFCWLCNPNNPDGRLLQ----RTEILRLLNDHPDTTFVLDQSYVSFTTEEVIR  179 (350)
T ss_dssp             ----G--------GS-------CCTTCSEEEEESSCTTTCCCCC----HHHHHHHHHHCTTSEEEEECTTTTSCSSCCCC
T ss_pred             ----c--------cC-------ccCCCCEEEEeCCCCCcCCCCC----HHHHHHHHHhCCCCEEEEECchhhhccCcchh
Confidence                0        00       0023445666666777887776    445555555544 5999999999887766432


Q ss_pred             e--ecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--hccH
Q 010250          325 G--CDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--ERNI  400 (514)
Q Consensus       325 ~--~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~~~~  400 (514)
                      .  .+.++....+.++||.++.+++++|++++++++++.+...         ..+++.++++++++.++|+...  .+.+
T Consensus       180 ~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~  250 (350)
T 3fkd_A          180 PADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAF---------STPWAVNALAIEAAKFILIHPAQFTLPI  250 (350)
T ss_dssp             GGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTT---------CCTTCSCHHHHHHHHHHHHCTTTTCCCH
T ss_pred             hHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHh---------CCCCCCCHHHHHHHHHHHhCHHHHHHHH
Confidence            2  1112211223378999983338999999999999988742         2356788999999998888543  1233


Q ss_pred             HHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-------
Q 010250          401 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------  472 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-------  472 (514)
                      .+ ..++.+++.+.|+++   +.+....+.|.++.+.+....            ...+.+.|.+ +||.+.++       
T Consensus       251 ~~-~~~~~~~l~~~L~~~---~~~~~~~~~~~~~~~~~~~~~------------~~~l~~~L~~~~gi~v~~g~~f~~~~  314 (350)
T 3fkd_A          251 RK-WQRNTVDFITALNRL---DGVEVHPSGTTFFLLRLKKGT------------AAELKKYMLEEYNMLIRDASNFRGLD  314 (350)
T ss_dssp             HH-HHHHHHHHHHHHHHS---TTEEECCCSSSEEEEEESSSC------------HHHHHHHHHHTTCEECEECTTSTTCC
T ss_pred             HH-HHHHHHHHHHHHhcC---CCcEECCCCCcEEEEECCCCC------------HHHHHHHHHHHCCEEEEeCccCCCCC
Confidence            33 347788888888765   333334556777777775421            4568888998 99999875       


Q ss_pred             CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          473 GDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       473 g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      .+.|||+.   .+++++++++++|++.+++
T Consensus       315 ~~~iRis~---~~~~~~~~l~~al~~~~~~  341 (350)
T 3fkd_A          315 ESYVRITT---QRPAQNQLFIKALETFLEK  341 (350)
T ss_dssp             TTEEEEEC---CCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEEc---CCHHHHHHHHHHHHHHHHH
Confidence            35799994   4889999999988877653

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=99.94  E-value=3.9e-26  Score=235.98  Aligned_cols=348  Identities=9%  Similarity=0.046  Sum_probs=221.8

Q ss_pred             CCCEEEEccCCcccccCCC--CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC-----CCCeEEE--e
Q 010250           98 NGKKYLDSLAGLWCTALGG--SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS-----KMAKVFF--T  168 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh--~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~-----~~~~v~~--~  168 (514)
                      +|+.++||.+|....+.|+  .+|.|.+|+.+++.+....+. + .+.....++.+.+++++...     ..++|++  +
T Consensus        28 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~-y-~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t  105 (412)
T 1ajs_A           28 PDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHE-Y-LPILGLAEFRTCASRLALGDDSPALQEKRVGGVQS  105 (412)
T ss_dssp             CCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCC-C-CCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEE
T ss_pred             CCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccC-C-CCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEEC
Confidence            4778999999865455555  358999999988733111111 1 12333467888888877321     3578999  9


Q ss_pred             CChhHHHHHHHHHHHHHHhhcCCCCc----cEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccC
Q 010250          169 NSGSEANDTQVKLVWYYNNALGRPNK----KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRY  242 (514)
Q Consensus       169 ~sGseA~~~Alk~a~~~~~~~~~~~~----~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~  242 (514)
                      +||++|++.+++++..+.     +++    ++|++.+++||+........+.....            .++.  ++.|. 
T Consensus       106 ~gg~~a~~~~~~~~~~~~-----~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~------------~~~~~~~~~~~-  167 (412)
T 1ajs_A          106 LGGTGALRIGAEFLARWY-----NGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIR------------SYRYWDTEKRG-  167 (412)
T ss_dssp             EHHHHHHHHHHHHHHHHS-----SSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEE------------EEECEETTTTE-
T ss_pred             CCcHHHHHHHHHHHHHhC-----cCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeE------------EEeeecCCCCc-
Confidence            999999999988664331     221    68999999999976444333221011            1111  01111 


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc-
Q 010250          243 AHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG-  321 (514)
Q Consensus       243 ~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G-  321 (514)
                                  .++++|++.+.+..+ ++.++++...++.+|. .++.+++++|.++|++||+++|+||+|++|++.| 
T Consensus       168 ------------~d~~~l~~~l~~~~~-~~~~v~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~  233 (412)
T 1ajs_A          168 ------------LDLQGFLSDLENAPE-FSIFVLHACAHNPTGT-DPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNL  233 (412)
T ss_dssp             ------------ECHHHHHHHHHHSCT-TCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCH
T ss_pred             ------------cCHHHHHHHHHhCCC-CcEEEEECCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcc
Confidence                        115778887765433 3445544444455565 4577999999999999999999999999998876 


Q ss_pred             --ccceecccCCCCc----hhchhhhhcCCcccceeEEe---CHHHHHHhhhccCCCCcccccCCCC-CcHHHHHHHHHH
Q 010250          322 --TMFGCDKYSIKPD----LVSFAKALSSAYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYS-GHPVSCAVAIEA  391 (514)
Q Consensus       322 --~~~~~~~~gv~pD----iv~~sK~l~gG~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~-~~pl~~aaa~aa  391 (514)
                        ..+.+..+...+|    +.++||.++..++|+|++++   ++++++.+...-   .. .+..++. .++++++++.++
T Consensus       234 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~a~~~~  309 (412)
T 1ajs_A          234 EKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQM---QK-IVRVTWSNPPAQGARIVART  309 (412)
T ss_dssp             HHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHH---HH-HHHTTTSSCCSHHHHHHHHH
T ss_pred             cccchHHHHHhccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHH---HH-HHhcccCCCChHHHHHHHHH
Confidence              3333332221234    34789999873389999999   887544432100   01 1334555 488999999998


Q ss_pred             HHHHh--------hccHHHHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHH
Q 010250          392 LKIYK--------ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQC  462 (514)
Q Consensus       392 l~~~~--------~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l  462 (514)
                      |+...        -+++.++++++++++.+.|+++.....+..+... |.+..+.+.               ...+...+
T Consensus       310 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~l  374 (412)
T 1ajs_A          310 LSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN---------------PKQVEYLI  374 (412)
T ss_dssp             HHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC---------------HHHHHHHH
T ss_pred             HcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeEEcCCCceEEEeCCC---------------HHHHHHHH
Confidence            87542        1456788888999999999876200011111222 333333221               23344566


Q ss_pred             HHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          463 EKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       463 ~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      .++||++.++   +|+++.. +|++++++++++|++++++
T Consensus       375 ~~~gv~v~~~---~Ris~~~-~~~~~i~~~~~~l~~~l~~  410 (412)
T 1ajs_A          375 NQKHIYLLPS---GRINMCG-LTTKNLDYVATSIHEAVTK  410 (412)
T ss_dssp             HTTCEECCTT---SEEEGGG-CCTTTHHHHHHHHHHHHHH
T ss_pred             HhCCEEecCC---cEEEeee-CCHHHHHHHHHHHHHHHHh
Confidence            7899999863   6999653 5999999999999998864

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=99.94  E-value=5e-26  Score=238.04  Aligned_cols=351  Identities=9%  Similarity=0.043  Sum_probs=227.3

Q ss_pred             CcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccccc-ccCCchHHHHHHHHHHhcC---cCCCCeEE
Q 010250           91 GSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFW-NRTTKPSLDLAKELLEMFT---ASKMAKVF  166 (514)
Q Consensus        91 G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~~~ela~~L~~~~~---~~~~~~v~  166 (514)
                      +.+..+.+|+++|||.+|.  ..++ .+|+|++|+.+++++....+... ..+.....+|.+.+++++.   +...++++
T Consensus        60 ~~~~~~~~~~~~i~l~~g~--~~~~-~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~  136 (449)
T 3qgu_A           60 KAHQEKNPDAKIISLGIGD--TTEP-LPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIF  136 (449)
T ss_dssp             HHHHHHCTTCCCEECSSCC--CCCC-CCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEE
T ss_pred             HHHHhhCCCCCEEEeeCCC--CCCC-CCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEE
Confidence            3333334789999999884  3344 68999999999998532111111 1122345788888888862   23457999


Q ss_pred             EeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCC
Q 010250          167 FTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPG  246 (514)
Q Consensus       167 ~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (514)
                      |++|+++++..+ ....        .++++|++.+++|++........+....... ..  ...+..++....       
T Consensus       137 ~t~G~~~al~~~-~~l~--------~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~-~~--~~~~~~~~~~~~-------  197 (449)
T 3qgu_A          137 ISDGSKCDIARI-QMMF--------GSKPTVAVQDPSYPVYVDTSVMMGMTGDHNG-TG--FDGIEYMVCNPD-------  197 (449)
T ss_dssp             EESCHHHHHHHH-HHHH--------CSSSCEEEEESCCTHHHHHHHHHTCSCCBCS-SS--BTTEEEEECCGG-------
T ss_pred             EccCHHHHHHHH-HHHh--------CCCCEEEEcCCCChhHHHHHHHcCCcccccc-cc--cceeEEEecccc-------
Confidence            999999999988 3332        3457899999999998654444332211100 00  000111111110       


Q ss_pred             CChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ce
Q 010250          247 ETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FG  325 (514)
Q Consensus       247 ~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~  325 (514)
                         +.+    ..++++    .  .++++|+++..++++|.+. +.+.+++|+++|++||+++|+||+|++|++.|.. ..
T Consensus       198 ---~~~----~~~~~~----~--~~~~~v~l~~p~NPtG~~~-~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~  263 (449)
T 3qgu_A          198 ---NHF----FPDLSK----A--KRTDIIFFCSPNNPTGAAA-TRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKT  263 (449)
T ss_dssp             ---GTT----CCCGGG----C--CCCSEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSS
T ss_pred             ---cCC----cCChhH----c--CCCCEEEEeCCCCCCCCcC-CHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCC
Confidence               000    011111    1  2445666666677777654 6788999999999999999999999998777642 22


Q ss_pred             eccc----CCCCchhchhhhhc-CCcccceeEEeCHHHHH--------HhhhccCCCCcccccCCCCCcHHHHHHHHHHH
Q 010250          326 CDKY----SIKPDLVSFAKALS-SAYMPIGAILVSPEVSE--------VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEAL  392 (514)
Q Consensus       326 ~~~~----gv~pDiv~~sK~l~-gG~~pig~v~~~~~i~~--------~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal  392 (514)
                      ...+    ++..++.++||+++ .| +|+|++++++++++        .+..       .....+++.++++++++.++|
T Consensus       264 ~~~~~~~~~~~i~~~s~sK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l  335 (449)
T 3qgu_A          264 IYEIPGADEVAIETCSFSKYAGFTG-VRLGWTVVPKALKYANGEPVHADWNR-------VMTTCFNGASNIVQAGGLACL  335 (449)
T ss_dssp             GGGSTTGGGTEEEEEECSGGGTCTT-CCCEEEECCTTCBCTTSCBHHHHHHH-------HHHHSCCCCCHHHHHHHHHHT
T ss_pred             HhhccCCCCcEEEEecchhhcCCcc-ceeEEEecCHHHHhhhhhhHHHHHHH-------HhhcccCCCCHHHHHHHHHHH
Confidence            2222    22233557999998 45 89999999988765        2221       123345578899999999888


Q ss_pred             HHHh---hccHHHHHHHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-Cc
Q 010250          393 KIYK---ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GM  467 (514)
Q Consensus       393 ~~~~---~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv  467 (514)
                      +...   .+++.++++++.+++++.|+++ ...+   ..+ .|.++++.+. ..           ....+.+.|+++ ||
T Consensus       336 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~---~~~~~~~~~~~~~~-~~-----------~~~~~~~~l~~~~gI  399 (449)
T 3qgu_A          336 QPEGLKEMNAMIKFYKENAQILKTTFTEM-GFSV---YGGDDAPYIWVGFP-GK-----------PSWDVFAEILERCNI  399 (449)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCE---EESSSSSEEEEECT-TS-----------CHHHHHHHHHHHHCE
T ss_pred             hhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCee---eCCCCeeEEEEECC-CC-----------CHHHHHHHHHHHCCE
Confidence            6521   2456788888999999999876 2222   223 3667777775 11           134577777775 99


Q ss_pred             EEEee-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          468 LVRVS-------GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       468 ~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ++.++       .+.|||+  +..++++|++++++|++++++-
T Consensus       400 ~v~pg~~f~~~~~~~iRis--~~~~~e~i~~~l~~l~~~~~~~  440 (449)
T 3qgu_A          400 VTTPGSGYGPAGEGFVRAS--AFGSRENILEAVRRFKEAYGKR  440 (449)
T ss_dssp             ECEEGGGGCGGGTTEEEEE--CCSCHHHHHHHHHHHHHHHC--
T ss_pred             EEecchHhCCCCCCeEEEE--ecCCHHHHHHHHHHHHHHHHhc
Confidence            99864       2679999  6779999999999999988643

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=99.94  E-value=1.5e-25  Score=232.84  Aligned_cols=343  Identities=10%  Similarity=0.077  Sum_probs=223.0

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhc---------CCccccccccCCchHHHHHHHHHHhcCc-------CCCCe
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNT---------LPFYHSFWNRTTKPSLDLAKELLEMFTA-------SKMAK  164 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~---------~~~~~~~~~~~~~~~~ela~~L~~~~~~-------~~~~~  164 (514)
                      .++||.++.  +++|  +|.+.+++.++...         .... ..+. ......++.+.+++++..       .+.++
T Consensus        37 ~~i~l~~~~--~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~-~~Y~-~~~g~~~lr~~la~~~~~~~g~~~~~~~~~  110 (428)
T 1iay_A           37 GVIQMGLAE--NQLC--LDLIEDWIKRNPKGSICSEGIKSFKAI-ANFQ-DYHGLPEFRKAIAKFMEKTRGGRVRFDPER  110 (428)
T ss_dssp             SBEECSSCC--CCSS--HHHHHHHHHHCTTSSTTC----CHHHH-HHCC-CTTCCHHHHHHHHHHHHHHTTTCSCCCTTS
T ss_pred             ceeeecccc--chhh--HHHHHHHHHhccccccccccccccHhh-cCCC-CCCCcHHHHHHHHHHHHHhcCCCCCCChhh
Confidence            478887664  5666  47888888754310         0000 0111 111135666666666531       34678


Q ss_pred             EEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccC
Q 010250          165 VFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRY  242 (514)
Q Consensus       165 v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~  242 (514)
                      +++++||++|++.+++.+.        ..+++|++.+++||+.........|...            ..++..  ..|. 
T Consensus       111 i~~~~G~~~ai~~~~~~~~--------~~gd~Vl~~~p~y~~~~~~~~~~~g~~~------------~~v~~~~~~~~~-  169 (428)
T 1iay_A          111 VVMAGGATGANETIIFCLA--------DPGDAFLVPSPYYPAFNRDLRWRTGVQL------------IPIHCESSNNFK-  169 (428)
T ss_dssp             CEEEEHHHHHHHHHHHHHC--------CTTCEEEEESSCCTTHHHHTTTTTCCEE------------EEECCCTTTTTC-
T ss_pred             EEEccChHHHHHHHHHHhC--------CCCCeEEEccCCCcchHHHHHHhcCCEE------------EEeecCCccCCc-
Confidence            9999999999999998773        2346899999999987543222223211            111111  0111 


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250          243 AHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL  320 (514)
Q Consensus       243 ~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~  320 (514)
                                  .+++++++.+.+.  ...++++|+++..++++|.+. +++++++|.++|++||+++|+||+|+++++.
T Consensus       170 ------------~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~  236 (428)
T 1iay_A          170 ------------ITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTL-DKDTLKSVLSFTNQHNIHLVCDEIYAATVFD  236 (428)
T ss_dssp             ------------CCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHTTTCEEEEECTTGGGCCS
T ss_pred             ------------CCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcC-CHHHHHHHHHHHHHCCeEEEEeccccccccC
Confidence                        0146777776542  223566666665567778764 7799999999999999999999999987666


Q ss_pred             cccc-eeccc-------CCCCc----hhchhhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHH
Q 010250          321 GTMF-GCDKY-------SIKPD----LVSFAKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAV  387 (514)
Q Consensus       321 G~~~-~~~~~-------gv~pD----iv~~sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aa  387 (514)
                      |..+ ....+       ++.+|    +.++||+++.+++|+|++++ ++++++.+...         ..+++.+++++++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~a  307 (428)
T 1iay_A          237 TPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARKM---------SSFGLVSTQTQYF  307 (428)
T ss_dssp             SSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHHH---------HTTSCCCHHHHHH
T ss_pred             CCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHHH---------HhcccCCHHHHHH
Confidence            5422 11111       23477    44789999733389999999 68888887631         2346678899988


Q ss_pred             HHHHHHHHh---h--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHH
Q 010250          388 AIEALKIYK---E--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQ  461 (514)
Q Consensus       388 a~aal~~~~---~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  461 (514)
                      +.++|+...   +  +++.++++++++++.+.|+++ ...+   +++ .|.++++++......     ........+.+.
T Consensus       308 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~---~~~~~g~~~~~~~~~~~~~-----~~~~~~~~l~~~  378 (428)
T 1iay_A          308 LAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKC---LKNNAGLFCWMDLRPLLRE-----STFDSEMSLWRV  378 (428)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCB---CCCSSSSEEEEECGGGCSS-----SSHHHHHHHHHH
T ss_pred             HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcc---cCCCeeEEEEEechhhcCC-----CchhHHHHHHHH
Confidence            888886432   1  356778888889999988876 3222   223 467788887642110     001124467888


Q ss_pred             HHHC-CcEEEeeC-------CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          462 CEKH-GMLVRVSG-------DNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       462 l~~~-Gv~~~~~g-------~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      |+++ ||++.+++       +.+||+++ .++++++++++++|++++++
T Consensus       379 l~~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~  426 (428)
T 1iay_A          379 IINDVKLNVSPGSSFECQEPGWFRVCFA-NMDDGTVDIALARIRRFVGV  426 (428)
T ss_dssp             HHHTSCEECEEGGGGTCSSSSEEEEECS-SSCHHHHHHHHHHHHHHHHT
T ss_pred             HHHhCCEEEeCchhhCCCCCCEEEEEEe-cCCHHHHHHHHHHHHHHHhc
Confidence            8876 99998752       47999987 58999999999999988753

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=99.94  E-value=4.4e-25  Score=224.21  Aligned_cols=324  Identities=12%  Similarity=0.150  Sum_probs=223.0

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ  178 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A  178 (514)
                      ++.+|||.++.  ++++ .+|+|++|+.++++....|      +.....++.+.|+++++ .+.+++++++||++|++.+
T Consensus        29 ~~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~y------~~~~~~~lr~~la~~~~-~~~~~v~~~~g~~~a~~~~   98 (365)
T 3get_A           29 VKEVIKLASNE--NPFG-TPPKAIECLRQNANKAHLY------PDDSMIELKSTLAQKYK-VQNENIIIGAGSDQVIEFA   98 (365)
T ss_dssp             CSCCEECSSCC--CTTC-SCHHHHHHHHHHGGGTTSC------CCTTCHHHHHHHHHHHT-CCGGGEEEESSHHHHHHHH
T ss_pred             CCceEEecCCC--CCCC-CCHHHHHHHHHHHHhhccC------CCCChHHHHHHHHHHhC-CCcceEEECCCHHHHHHHH
Confidence            37899998875  4566 7899999999998754322      12223688899999884 3467999999999999999


Q ss_pred             HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250          179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN  258 (514)
Q Consensus       179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (514)
                      ++...        ..+++|++.+++|++........+....             .++.+        .   +.+  .+++
T Consensus        99 ~~~l~--------~~gd~vl~~~~~~~~~~~~~~~~g~~~~-------------~v~~~--------~---~~~--~d~~  144 (365)
T 3get_A           99 IHSKL--------NSKNAFLQAGVTFAMYEIYAKQCGAKCY-------------KTQSI--------T---HNL--DEFK  144 (365)
T ss_dssp             HHHHC--------CTTCEEEECSSCCTHHHHHHHHHTCEEE-------------ECSSS--------S---CCH--HHHH
T ss_pred             HHHHh--------CCCCEEEEeCCChHHHHHHHHHcCCEEE-------------EEecC--------C---CCC--CCHH
Confidence            98763        3357899999999876543332221111             11110        0   112  4467


Q ss_pred             HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc--cc-ccc-eec---ccCC
Q 010250          259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR--LG-TMF-GCD---KYSI  331 (514)
Q Consensus       259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr--~G-~~~-~~~---~~gv  331 (514)
                      ++++.+.    +++++|+++..++++|.+.+ .+.+++|.++| ++|+++|+||+|+++..  .| ... ...   .++.
T Consensus       145 ~l~~~l~----~~~~~v~~~~p~nptG~~~~-~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (365)
T 3get_A          145 KLYETHK----DEIKLIFLCLPNNPLGECLD-ASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDN  218 (365)
T ss_dssp             HHHHHTT----TTEEEEEEESSCTTTCCCCC-HHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTT
T ss_pred             HHHHHhC----CCCCEEEEcCCCCCCCCCcC-HHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCC
Confidence            7777764    45777777666777787664 45566666666 67999999999997752  22 211 111   1222


Q ss_pred             CCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHH
Q 010250          332 KPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPK  410 (514)
Q Consensus       332 ~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~  410 (514)
                      ...+.+++|.++.+++++|++++++++++.+...         ..+++.++++++++.++|+..+ -++..++++++.++
T Consensus       219 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  289 (365)
T 3get_A          219 VLYLGTFSKLYGLGGLRIGYGIANANIISAFYKL---------RAPFNVSNLALKAAVAAMDDDEFTEKTLENNFSQMEL  289 (365)
T ss_dssp             EEEEEESSSTTSCTTTCCEEEEECHHHHHHHHHH---------SCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeecchHhcCcchheEEEEcCHHHHHHHHHh---------cCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence            2233478999873338999999999999988742         2346688999999988887432 13456777788888


Q ss_pred             HHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC----CEEEEeCCCCCCH
Q 010250          411 FQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG----DNIMMSPPFIMSP  486 (514)
Q Consensus       411 l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g----~~iRi~p~~~~t~  486 (514)
                      +.+.|+++ .   +....+.|.++++.+....            ...+.+.|.++||.+.++.    +.+|+++.   ++
T Consensus       290 l~~~l~~~-g---~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~~gi~v~~g~~~~~~~iRis~~---~~  350 (365)
T 3get_A          290 YKEFAKKH-N---IKIIDSYTNFITYFFDEKN------------STDLSEKLLKKGIIIRNLKSYGLNAIRITIG---TS  350 (365)
T ss_dssp             HHHHHHHT-T---CEECCCSSSEEEEECSSSC------------HHHHHHHHHTTTEECEECGGGTCSEEEEECC---CH
T ss_pred             HHHHHHhC-C---CEECCCCCeEEEEECCCCC------------HHHHHHHHHHCCEEEEECccCCCCEEEEEcC---CH
Confidence            88888775 2   2223456777777775421            4568889999999998864    67999953   89


Q ss_pred             HHHHHHHHHHHHHH
Q 010250          487 EEVDELISKYGKAL  500 (514)
Q Consensus       487 e~id~~~~~l~~~l  500 (514)
                      +|+++++++|++++
T Consensus       351 ~~i~~l~~~l~~~l  364 (365)
T 3get_A          351 YENEKFFTEFDKIL  364 (365)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999998875

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=99.94  E-value=3.9e-26  Score=234.46  Aligned_cols=340  Identities=11%  Similarity=0.066  Sum_probs=213.0

Q ss_pred             EEeCCCCEEEEccCCcccccCC--CCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC-----CCCeEE
Q 010250           94 VYDVNGKKYLDSLAGLWCTALG--GSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS-----KMAKVF  166 (514)
Q Consensus        94 ~~d~dG~~ylD~~s~~~~~~lG--h~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~-----~~~~v~  166 (514)
                      +.+..|+.+|||.+|.+.++.|  +.+|.|.+++.+++++... +.  ..+.....++.+.|++++...     ..++|+
T Consensus        20 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~--y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~   96 (396)
T 2q7w_A           20 FRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETT-KN--YLGIDGIPEFGRCTQELLFGKGSALINDKRAR   96 (396)
T ss_dssp             --------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCC-CC--CCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEE
T ss_pred             HhccCCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccc-cC--CCCCCCCHHHHHHHHHHHhcCCCCccccccEE
Confidence            3344577899999997666666  5679999999998765311 11  112333567777777776221     257899


Q ss_pred             E--eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccC
Q 010250          167 F--TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRY  242 (514)
Q Consensus       167 ~--~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~  242 (514)
                      +  ++||++|++.+++++..+      .++++|++.+++||+........+....             .++..  +.|. 
T Consensus        97 ~~~~~g~~~a~~~~~~~~~~~------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~-------------~~~~~~~~~~~-  156 (396)
T 2q7w_A           97 TAQTPGGTGALRVAADFLAKN------TSVKRVWVSNPSWPNHKSVFNSAGLEVR-------------EYAYYDAENHT-  156 (396)
T ss_dssp             EEEESHHHHHHHHHHHHHHHH------SCCCEEEEEESCCTHHHHHHHHTTCEEE-------------EEECEETTTTE-
T ss_pred             EEecccchhhHHHHHHHHHHh------CCCCEEEEcCCCchhHHHHHHHcCCceE-------------EEecccCCCCC-
Confidence            8  999999999999877533      2356899999999997644433222111             11110  0011 


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc-
Q 010250          243 AHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG-  321 (514)
Q Consensus       243 ~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G-  321 (514)
                                  .++++|++.+.+.. .+.+++++...++.+|.+ .+.+++++|.++|++||+++|+||+|++|++.| 
T Consensus       157 ------------~d~~~l~~~l~~~~-~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~  222 (396)
T 2q7w_A          157 ------------LDFDALINSLNEAQ-AGDVVLFHGCCHNPTGID-PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLE  222 (396)
T ss_dssp             ------------ECHHHHHHHHTTCC-TTCEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHH
T ss_pred             ------------cCHHHHHHHHHhCC-CCCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEecccccccCCcc
Confidence                        11577887775432 234556655556666754 567899999999999999999999999987654 


Q ss_pred             -ccceecccCCCCc----hhchhhhhc-CCcccceeEEe---CHH----HHHHhhhccCCCCcccccCCC-CCcHHHHHH
Q 010250          322 -TMFGCDKYSIKPD----LVSFAKALS-SAYMPIGAILV---SPE----VSEVIHSQSNTLGSFSHGFTY-SGHPVSCAV  387 (514)
Q Consensus       322 -~~~~~~~~gv~pD----iv~~sK~l~-gG~~pig~v~~---~~~----i~~~l~~~~~~~~~~~~~~t~-~~~pl~~aa  387 (514)
                       .......+...+|    +.++||.++ .| +|+|++++   +++    +++.+..        .+..++ ..+++++++
T Consensus       223 ~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~a  293 (396)
T 2q7w_A          223 EDAEGLRAFAAMHKELIVASSYSXNFGLYN-ERVGACTLVAADSETVDRAFSQMKA--------AIRANYSNPPAHGASV  293 (396)
T ss_dssp             HHTHHHHHHHHHCSCEEEEEECTTTTTCGG-GCCEEEEEECSSHHHHHHHHHHHHH--------HHHTTTSSCCHHHHHH
T ss_pred             chhHHHHHHHhcCCcEEEEEeccccccccc-cccceEEEEcCCHHHHHHHHHHHHH--------HHhhccCCCCcHHHHH
Confidence             2223332222223    336899998 45 89999997   564    4444431        112344 348889988


Q ss_pred             HHHHHHHH------h--hccHHHHHHHHHHHHHhhhhhcc---CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHH
Q 010250          388 AIEALKIY------K--ERNIVEQVNKIAPKFQDGVKAFS---DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGA  456 (514)
Q Consensus       388 a~aal~~~------~--~~~~~~~~~~~~~~l~~~L~~l~---~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~  456 (514)
                      +.++|+..      .  -+++.++++++.+++.+.|+++.   .....  ....|.+.++.+.               ..
T Consensus       294 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~~~~~~~~~~~~---------------~~  356 (396)
T 2q7w_A          294 VATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGANRDFSFI--IKQNGMFSFSGLT---------------KE  356 (396)
T ss_dssp             HHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHTTCCSCCTHH--HHCCSSEEECCCC---------------HH
T ss_pred             HHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccee--cCCCceEEEecCC---------------HH
Confidence            88888643      1  12356678888888888888762   12211  1122344333321               13


Q ss_pred             HHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          457 YFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       457 ~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      .+...+.++||++.++   +||+++. .|++++++++++|++++
T Consensus       357 ~~~~~l~~~gv~v~~~---~Ris~~~-~~~e~i~~~~~~l~~~l  396 (396)
T 2q7w_A          357 QVLRLREEFGVYAVAS---GRVNVAG-MTPDNMAPLCEAIVAVL  396 (396)
T ss_dssp             HHHHHHHHHCEECCTT---CEEEGGG-CCTTTHHHHHHHHHHHC
T ss_pred             HHHHHHHhcCeeecCC---ceEEEee-cCHHHHHHHHHHHHhcC
Confidence            4556677899998763   7999874 49999999999998753

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=99.93  E-value=1.8e-24  Score=220.93  Aligned_cols=338  Identities=16%  Similarity=0.134  Sum_probs=230.2

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV  179 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al  179 (514)
                      +.|+|..+      -++.+|++.+|+.+++..  ++..   ...+...+++++++++++....+.+++++||++|++.++
T Consensus        20 ~~~l~~~~------~~~~~~~v~~a~~~~~~~--~~~~---~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~   88 (386)
T 2dr1_A           20 KYKLFTAG------PVACFPEVLEIMKVQMFS--HRSK---EYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASI   88 (386)
T ss_dssp             CSEECCSS------SCCCCHHHHHHTTSCCCC--TTSH---HHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHH
T ss_pred             cceeecCC------CcCCcHHHHHHHhccccc--ccCH---HHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHH
Confidence            46888743      345789999988776643  1211   124566788999999875322467999999999999999


Q ss_pred             HHHHHHHhhcCCCCccEEEEEecCCcccce-eeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250          180 KLVWYYNNALGRPNKKKFIARQKSYHGSTL-IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN  258 (514)
Q Consensus       180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (514)
                      +.+.        .++++|++.+++||+... ......|...            ..++.+..+.             .+.+
T Consensus        89 ~~l~--------~~gd~vl~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~-------------~d~~  135 (386)
T 2dr1_A           89 RNGV--------SKGGKVLVTIIGAFGKRYKEVVESNGRKA------------VVLEYEPGKA-------------VKPE  135 (386)
T ss_dssp             HHHS--------CTTCEEEEEESSHHHHHHHHHHHHTTCEE------------EEEECCTTCC-------------CCHH
T ss_pred             HHhh--------cCCCeEEEEcCCchhHHHHHHHHHhCCce------------EEEecCCCCC-------------CCHH
Confidence            8763        345789999999998321 1111112111            1111111111             1157


Q ss_pred             HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhch
Q 010250          259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF  338 (514)
Q Consensus       259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~  338 (514)
                      +|++.+.+.  +++++|+++++++.+|.+.+    +++|.++|++||+++|+||+|+ +|...  +...  ...+|++++
T Consensus       136 ~l~~~l~~~--~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~~~~~--~~~~--~~~~di~~~  204 (386)
T 2dr1_A          136 DLDDALRKN--PDVEAVTITYNETSTGVLNP----LPELAKVAKEHDKLVFVDAVSA-MGGAD--IKFD--KWGLDVVFS  204 (386)
T ss_dssp             HHHHHHHHC--TTCCEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTT-BTTBC--CCTT--TTTCSEEEE
T ss_pred             HHHHHHhcC--CCCcEEEEEeecCCcchhCC----HHHHHHHHHHcCCeEEEEcccc-ccCcc--cccc--ccCCcEEEE
Confidence            788877541  35678888899999998876    9999999999999999999997 43321  1222  234688765


Q ss_pred             h--hhhcCCcccceeEEeCHHHHHHhhhcc---CCC------Ccc--cccCCCCCcHHHHHHHHHHHHHHhhc----cHH
Q 010250          339 A--KALSSAYMPIGAILVSPEVSEVIHSQS---NTL------GSF--SHGFTYSGHPVSCAVAIEALKIYKER----NIV  401 (514)
Q Consensus       339 s--K~l~gG~~pig~v~~~~~i~~~l~~~~---~~~------~~~--~~~~t~~~~pl~~aaa~aal~~~~~~----~~~  401 (514)
                      |  |+++++ .++|++++++++++.+....   ...      ...  ....+++.++++++++.++|+.+.+.    ++.
T Consensus       205 s~sK~~~~~-~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~  283 (386)
T 2dr1_A          205 SSQKAFGVP-PGLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWL  283 (386)
T ss_dssp             ETTSTTCCC-SSCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred             eccccccCC-CceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHH
Confidence            5  999986 36899999999888774210   000      000  11335567888999999999987654    567


Q ss_pred             HHHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCE
Q 010250          402 EQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDN  475 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~  475 (514)
                      ++++++++++.+.|+++ ........ ...+.++.+.+....           ....+.+.|.++||.+.++     .+.
T Consensus       284 ~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~gi~v~~~~~~~~~~~  351 (386)
T 2dr1_A          284 EMYEKRAKMVREGVREI-GLDILAEPGHESPTITAVLTPPGI-----------KGDEVYEAMRKRGFELAKGYGSVKEKT  351 (386)
T ss_dssp             HHHHHHHHHHHHHHHHT-TCCBSSCTTCBCSSEEEEECCTTC-----------CHHHHHHHHHHTTEECEECCGGGTTTE
T ss_pred             HHHHHHHHHHHHHHHHc-CCeeCcCccccCCceEEEEcCCCC-----------CHHHHHHHHHHCCeEEecCccccCCCE
Confidence            88899999999999876 33322210 114667777775211           1456888999999999874     367


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      +|++++..+|++|+++++++|+++++++..
T Consensus       352 iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~  381 (386)
T 2dr1_A          352 FRIGHMGYMKFEDIQEMLDNLREVINELKK  381 (386)
T ss_dssp             EEEECCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence            999998889999999999999999877643

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=99.93  E-value=8.8e-25  Score=225.47  Aligned_cols=356  Identities=9%  Similarity=0.012  Sum_probs=221.0

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcCc-CCC-CeEEEeCChhHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTA-SKM-AKVFFTNSGSEAND  176 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~~-~~~-~~v~~~~sGseA~~  176 (514)
                      ..+|||..|.  ..++ .+|+|.+|+.+++..... .+....+..+....+++.+.+.++. ... +++++++||++|++
T Consensus        23 ~~~i~l~~~~--~~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~   99 (410)
T 3e2y_A           23 PSVVNLGQGF--PDIS-PPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLF   99 (410)
T ss_dssp             TTSEECSSCC--CCSC-CCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred             CCeEEecCCC--CCCC-CCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHH
Confidence            4568887774  2343 689999999999875311 1111011223333444444433321 234 68999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL  256 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (514)
                      .+++.+.        .++++|++.+++|++........ |.................. ....|.             .+
T Consensus       100 ~~~~~~~--------~~gd~vl~~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~g~~~-~~~~~~-------------~d  156 (410)
T 3e2y_A          100 NSIQGLV--------DPGDEVIIMVPFYDCYEPMVRMA-GAVPVFIPLRSKPTDGMKW-TSSDWT-------------FD  156 (410)
T ss_dssp             HHHHHHC--------CTTCEEEEEESCCTTHHHHHHHT-TCEEEEEECEECCCCSSCC-BGGGEE-------------CC
T ss_pred             HHHHHhc--------CCCCEEEEeCCCchhhHHHHHHc-CCEEEEEeccccccccccc-cccCCc-------------CC
Confidence            9998773        34568999999999875433222 2111100000000000000 000000             11


Q ss_pred             HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccCCC---
Q 010250          257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYSIK---  332 (514)
Q Consensus       257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~gv~---  332 (514)
                      ++++++.+.    +++++|++++.++++|.+. +++.+++|.++|++||+++|+||+|++|++.|..+ ....+...   
T Consensus       157 ~~~l~~~~~----~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~  231 (410)
T 3e2y_A          157 PRELESKFS----SKTKAIILNTPHNPLGKVY-TRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWER  231 (410)
T ss_dssp             HHHHHTTCC----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGG
T ss_pred             HHHHHhhcC----CCceEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCe
Confidence            456665553    4678888888888888765 56789999999999999999999999998877532 22222211   


Q ss_pred             -CchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH-------h--hccHHH
Q 010250          333 -PDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY-------K--ERNIVE  402 (514)
Q Consensus       333 -pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~-------~--~~~~~~  402 (514)
                       .++.++||.++.+++++|++++++++++.+..       .....+++.++++++++.++|+..       .  -++..+
T Consensus       232 ~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  304 (410)
T 3e2y_A          232 TITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQT-------VQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPK  304 (410)
T ss_dssp             EEEEEEHHHHSSCGGGCCEEEECCHHHHHHHHH-------HHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHH
T ss_pred             EEEEecchhhcCCCCceEEEEEECHHHHHHHHH-------HHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHH
Confidence             33447899998333899999999999988863       244568888999999999988741       1  123456


Q ss_pred             HHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEeeC--------
Q 010250          403 QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVSG--------  473 (514)
Q Consensus       403 ~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g--------  473 (514)
                      +++++.+++.+.|+++   ++.......|.++++++...................+...+ .++||++.+++        
T Consensus       305 ~~~~~~~~l~~~L~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~  381 (410)
T 3e2y_A          305 ELEVKRDRMVRLLNSV---GLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSK  381 (410)
T ss_dssp             HHHHHHHHHHHHHHTT---TCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTH
T ss_pred             HHHHHHHHHHHHHHHC---CCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCC
Confidence            6777777888877765   33223334566777777643211100000001123455544 57799998632        


Q ss_pred             ----CEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250          474 ----DNIMMSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       474 ----~~iRi~p~~~~t~e~id~~~~~l~~  498 (514)
                          +.|||+  +..++++|++++++|++
T Consensus       382 ~~~~~~iRis--~~~~~e~l~~~l~~l~~  408 (410)
T 3e2y_A          382 PHFEKLVRFC--FIKKDSTLDAAEEIFRA  408 (410)
T ss_dssp             HHHTTEEEEE--CCCCHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEE--EcCCHHHHHHHHHHHHh
Confidence                569999  67799999999999875

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=99.93  E-value=5.1e-25  Score=228.20  Aligned_cols=344  Identities=17%  Similarity=0.169  Sum_probs=223.9

Q ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHh--cCCcc-----ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeC
Q 010250           97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN--TLPFY-----HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTN  169 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~--~~~~~-----~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~  169 (514)
                      .++..|||+.++      |+.+|+|++++.+++.  +....     +.+.....+...+++++|+++++ .+.++++|++
T Consensus        20 ~~~~iyld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~-~~~~~v~~~~   92 (423)
T 3lvm_A           20 MKLPIYLDYSAT------TPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVG-ADPREIVFTS   92 (423)
T ss_dssp             CCSSEECBTTTC------CCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHT-CCGGGEEEES
T ss_pred             cCCCEeecCCCc------CCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcC-CCCCeEEEeC
Confidence            456789997654      4679999999999887  32111     00101123455788899999884 3456899999


Q ss_pred             ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee--cCCCccccCCCCCCCCcccccCCCCcccCCCCCC
Q 010250          170 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS--LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGE  247 (514)
Q Consensus       170 sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~--~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (514)
                      ||++|++.+++.+..+..    ..+++|++.++.|++.......  ..|...            ..++....+.      
T Consensus        93 ggt~a~~~a~~~l~~~~~----~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~------  150 (423)
T 3lvm_A           93 GATESDNLAIKGAANFYQ----KKGKHIITSKTEHKAVLDTCRQLEREGFEV------------TYLAPQRNGI------  150 (423)
T ss_dssp             SHHHHHHHHHHHHHHHHT----TTCCEEEEETTSCHHHHHHHHHHHHTTCEE------------EEECCCTTSC------
T ss_pred             ChHHHHHHHHHHHHHhhc----cCCCEEEECCccchHHHHHHHHHHHcCCEE------------EEeccCCCCc------
Confidence            999999999997754321    2357899999999886433221  112111            1111111110      


Q ss_pred             ChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceec
Q 010250          248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCD  327 (514)
Q Consensus       248 ~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~  327 (514)
                             .++++|++.+.    +++++|+++++++++|.+.+    +++|+++|++||++||+||+++ +|..    ...
T Consensus       151 -------~d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~~~~----~~~  210 (423)
T 3lvm_A          151 -------IDLKELEAAMR----DDTILVSIMHVNNEIGVVQD----IAAIGEMCRARGIIYHVDATQS-VGKL----PID  210 (423)
T ss_dssp             -------CCHHHHHHHCC----TTEEEEECCSBCTTTCBBCC----HHHHHHHHHHHTCEEEEECTTT-TTTS----CCC
T ss_pred             -------cCHHHHHHhcC----CCcEEEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEEhhhh-cCCC----CcC
Confidence                   01467777664    46899999999999998887    9999999999999999999987 3322    223


Q ss_pred             ccCCCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHH
Q 010250          328 KYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQ  403 (514)
Q Consensus       328 ~~gv~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~  403 (514)
                      .....+|++++|  |.+++  .++|++++++++++.+.......+......+...++.+++++.++++.+.+  +++.++
T Consensus       211 ~~~~~~di~~~s~sK~~g~--~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~  288 (423)
T 3lvm_A          211 LSQLKVDLMSFSGHKIYGP--KGIGALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMER  288 (423)
T ss_dssp             TTTSCCSEEEEESTTTTSC--SSCEEEEECBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhcCCCEEEechHHhcCC--CCeEEEEEeccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            334457888755  95543  469999999887665542110000000112345567788888788887765  567788


Q ss_pred             HHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----------
Q 010250          404 VNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------  472 (514)
Q Consensus       404 ~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------  472 (514)
                      ++++++++++.|+++....+.... ...+.++.+.+....            ...+.+.|.+  +.+.++          
T Consensus       289 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~l~~~l~~--i~v~~g~~~~~~~~~~  354 (423)
T 3lvm_A          289 LRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVE------------GESLIMALKD--LAVSSGSACTSASLEP  354 (423)
T ss_dssp             HHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEETTSC------------HHHHHHHTTT--EECBCCCC-----CCC
T ss_pred             HHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeCCCC------------HHHHHHHHhh--heeccCccccCCCccc
Confidence            888899999988765221111110 011345566653211            3446666655  555542          


Q ss_pred             --------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          473 --------------GDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       473 --------------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                                    .+.|||+++..+|++||++++++|+++++++.+
T Consensus       355 ~~~~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~  401 (423)
T 3lvm_A          355 SYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRD  401 (423)
T ss_dssp             CHHHHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             cHHHHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence                          267999999999999999999999999987764

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=99.93  E-value=1e-24  Score=223.66  Aligned_cols=331  Identities=14%  Similarity=0.111  Sum_probs=225.8

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCC-eEEEeCChhHHHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMA-KVFFTNSGSEANDT  177 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~-~v~~~~sGseA~~~  177 (514)
                      ++.|+|..+      -++.+|+|.+|+.+++..  .+..   ...+...+++++++++++. +.+ ++++++||++|++.
T Consensus        33 ~~~~l~~~~------~~~~~~~v~~a~~~~~~~--~~~~---~~~~~~~~~~~~la~~~g~-~~~~~v~~t~g~t~al~~  100 (393)
T 1vjo_A           33 PSRLLLGPG------PSNAHPSVLQAMNVSPVG--HLDP---AFLALMDEIQSLLRYVWQT-ENPLTIAVSGTGTAAMEA  100 (393)
T ss_dssp             CCCEECSSS------CCCCCHHHHHHHSSCCCC--TTSH---HHHHHHHHHHHHHHHHHTC-CCSCEEEESSCHHHHHHH
T ss_pred             ccceeccCC------CCCCCHHHHHHHhccccc--ccCH---HHHHHHHHHHHHHHHHhCC-CCCcEEEEeCchHHHHHH
Confidence            456888543      246789999998877653  1211   1235567888999988743 446 89999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCccccee-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL  256 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (514)
                      +++.++        .++++|++.+++||+.+.. .....|...            ..++.+..+.             .+
T Consensus       101 ~~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~-------------~d  147 (393)
T 1vjo_A          101 TIANAV--------EPGDVVLIGVAGYFGNRLVDMAGRYGADV------------RTISKPWGEV-------------FS  147 (393)
T ss_dssp             HHHHHC--------CTTCEEEEEESSHHHHHHHHHHHHTTCEE------------EEEECCTTCC-------------CC
T ss_pred             HHHhcc--------CCCCEEEEEcCChhHHHHHHHHHHcCCce------------EEEecCCCCC-------------CC
Confidence            999874        3456899999999983211 111112111            1111111110             11


Q ss_pred             HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh
Q 010250          257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV  336 (514)
Q Consensus       257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv  336 (514)
                      +++|++.+.+.   ++++|+++++++.+|.+.+    +++|.++|++||+++|+||+|+ +|...    .......+|++
T Consensus       148 ~~~l~~~l~~~---~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~g~~~----~~~~~~~~di~  215 (393)
T 1vjo_A          148 LEELRTALETH---RPAILALVHAETSTGARQP----LEGVGELCREFGTLLLVDTVTS-LGGVP----IFLDAWGVDLA  215 (393)
T ss_dssp             HHHHHHHHHHH---CCSEEEEESEETTTTEECC----CTTHHHHHHHHTCEEEEECTTT-TTTSC----CCTTTTTCSEE
T ss_pred             HHHHHHHHhhC---CceEEEEeccCCCcceecc----HHHHHHHHHHcCCEEEEECCcc-ccCcC----CcccccCccEE
Confidence            57788877642   3567888899899998876    8999999999999999999998 76432    22234467888


Q ss_pred             chh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccc------------cCCC-CCcHHHHHHHHHHHHHHhh---c
Q 010250          337 SFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSH------------GFTY-SGHPVSCAVAIEALKIYKE---R  398 (514)
Q Consensus       337 ~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~------------~~t~-~~~pl~~aaa~aal~~~~~---~  398 (514)
                      +.|  |+++++. ++|++++++++++.+.........+.+            ..++ +.++++++++.++|+.+.+   +
T Consensus       216 ~~s~sK~l~~~~-~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~  294 (393)
T 1vjo_A          216 YSCSQKGLGCSP-GASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLA  294 (393)
T ss_dssp             ECCSSSTTCSCS-SCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHH
T ss_pred             EEcCcccccCCC-ceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHH
Confidence            655  9999885 999999999998887532101111111            1234 6688899999999988754   3


Q ss_pred             cHHHHHHHHHHHHHhhhhhccCCCceeEEEe--eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee---
Q 010250          399 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG--TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS---  472 (514)
Q Consensus       399 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g--~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~---  472 (514)
                      ++.++++++++++.+.|+++ ...+... .+  .+.+..+.++...           ....+.+.|.++ ||.+.++   
T Consensus       295 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~~gi~v~~g~~~  361 (393)
T 1vjo_A          295 NCWQRHQKNVEYLWERLEDI-GLSLHVE-KEYRLPTLTTVCIPDGV-----------DGKAVARRLLNEHNIEVGGGLGE  361 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT-TCCBSSC-GGGBCSSEEEEECCTTC-----------CHHHHHHHHHHHHCEECEECCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHc-CCcccCC-ccccCCcEEEEEcCCCC-----------CHHHHHHHHHhhCCEEEecCccc
Confidence            56788999999999999876 3333221 11  2345566653211           145688889888 9999874   


Q ss_pred             --CCEEEEeC-CCCCCHHHHHHHHHHHHHHH
Q 010250          473 --GDNIMMSP-PFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       473 --g~~iRi~p-~~~~t~e~id~~~~~l~~~l  500 (514)
                        .+.+||++ ++..+++++++++++|++++
T Consensus       362 ~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l  392 (393)
T 1vjo_A          362 LAGKVWRVGLMGFNSRKESVDQLIPALEQVL  392 (393)
T ss_dssp             GTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence              36799995 56678889999999998875

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=99.93  E-value=4.5e-25  Score=223.80  Aligned_cols=316  Identities=15%  Similarity=0.132  Sum_probs=212.8

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ  178 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A  178 (514)
                      .+++|||.+|.  +++|+ +|.+  +    +.....|      +.....++.+.|+++++ .+.+++++++||+||++.+
T Consensus        28 ~~~~i~l~~~~--~~~~~-~~~v--a----~~~~~~Y------~~~~~~~lr~~la~~~~-~~~~~v~~~~G~~~ai~~~   91 (356)
T 1fg7_A           28 GNGDVWLNANE--YPTAV-EFQL--T----QQTLNRY------PECQPKAVIENYAQYAG-VKPEQVLVSRGADEGIELL   91 (356)
T ss_dssp             TTCSEECSSCC--CSSCC-CCCC--C----CCCTTSC------CCSSCHHHHHHHHHHHT-SCGGGEEEESHHHHHHHHH
T ss_pred             CCceEEeeCCC--CCCCC-CHhH--h----hhhhccC------CCccHHHHHHHHHHHhC-CChHHEEEcCCHHHHHHHH
Confidence            35689998885  67897 4555  2    2222112      22225788999999884 3457899999999999999


Q ss_pred             HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250          179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN  258 (514)
Q Consensus       179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (514)
                      ++.+.       .+++++|++.+++||+........+. ...            .++..+.|.             .+++
T Consensus        92 ~~~~~-------~~g~d~Vl~~~p~~~~~~~~~~~~g~-~~~------------~v~~~~~~~-------------~d~~  138 (356)
T 1fg7_A           92 IRAFC-------EPGKDAILYCPPTYGMYSVSAETIGV-ECR------------TVPTLDNWQ-------------LDLQ  138 (356)
T ss_dssp             HHHHC-------CTTTCEEEECSSSCTHHHHHHHHHTC-EEE------------ECCCCTTSC-------------CCHH
T ss_pred             HHHHh-------CCCCCEEEEeCCChHHHHHHHHHcCC-EEE------------EeeCCCCCC-------------CCHH
Confidence            98763       13337899999999997644433221 111            111111111             0135


Q ss_pred             HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee-cccCCCCchhc
Q 010250          259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC-DKYSIKPDLVS  337 (514)
Q Consensus       259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~-~~~gv~pDiv~  337 (514)
                      ++++.+.     ++++|++...++++|.+. +.+++++|.++|+ ||+++|+||+|++|++....... +.++....+.+
T Consensus       139 ~l~~~i~-----~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s  211 (356)
T 1fg7_A          139 GISDKLD-----GVKVVYVCSPNNPTGQLI-NPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRT  211 (356)
T ss_dssp             HHHTSCT-----TEEEEEEESSCTTTCCCC-CHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEE
T ss_pred             HHHHHhc-----CCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEec
Confidence            5555442     456666666778888765 5789999999999 99999999999988632222221 22222223447


Q ss_pred             hhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHhh
Q 010250          338 FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK---ERNIVEQVNKIAPKFQDG  414 (514)
Q Consensus       338 ~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~---~~~~~~~~~~~~~~l~~~  414 (514)
                      +||.++.+++++|++++++++++.+...         ..+|+.|+++++++.++|+...   -++..++++++++++.+.
T Consensus       212 ~sK~~g~~G~r~G~~~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  282 (356)
T 1fg7_A          212 LSKAFALAGLRCGFTLANEEVINLLMKV---------IAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAA  282 (356)
T ss_dssp             SSSTTCCGGGCCEEEEECHHHHHHHHHH---------SCSSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHhhcCchhhhEEEEeCHHHHHHHHHh---------cCCCCCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHH
Confidence            8999873338999999999999888742         2356788999999998886533   234567778888888888


Q ss_pred             hhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC------CEEEEeCCCCCCHHH
Q 010250          415 VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG------DNIMMSPPFIMSPEE  488 (514)
Q Consensus       415 L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g------~~iRi~p~~~~t~e~  488 (514)
                      |+++..  +....++.|.++.+.+.  .            ...+.+.|.++||++++.|      +.+|++++   +++|
T Consensus       283 L~~~~~--~~~~~~~~~~~~~~~~~--~------------~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~~---~~~e  343 (356)
T 1fg7_A          283 LKEIPC--VEQVFDSETNYILARFK--A------------SSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG---TREE  343 (356)
T ss_dssp             HHHSTT--EEEECCCSSSEEEEEET--T------------HHHHHHHHHHTTEECEECTTSTTCTTEEEEECC---CHHH
T ss_pred             HHhCCC--ceEECCCCCeEEEEECC--C------------HHHHHHHHHHCCEEEEECCCCCCCCCeEEEEeC---CHHH
Confidence            877521  12223455777777774  1            3457888999999999832      47999964   7899


Q ss_pred             HHHHHHHHHH
Q 010250          489 VDELISKYGK  498 (514)
Q Consensus       489 id~~~~~l~~  498 (514)
                      +++++++|++
T Consensus       344 ~~~~~~~l~~  353 (356)
T 1fg7_A          344 SQRVIDALRA  353 (356)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHh
Confidence            9999998875

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=99.93  E-value=1.3e-25  Score=228.27  Aligned_cols=330  Identities=14%  Similarity=0.131  Sum_probs=224.5

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC---c--cccccccCCchHHHHHHH-HHHhcCcCCCCeEEEeCChhH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP---F--YHSFWNRTTKPSLDLAKE-LLEMFTASKMAKVFFTNSGSE  173 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~---~--~~~~~~~~~~~~~ela~~-L~~~~~~~~~~~v~~~~sGse  173 (514)
                      -.|||+.+     +.++.+|++.+|+.+++....   +  .+.....+.+...++++. ++++++.   +.++|++||++
T Consensus         9 ~i~ld~~~-----~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~---~~v~~~~g~t~   80 (371)
T 2e7j_A            9 FINIDPLQ-----TGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGC---DVARVTNGARE   80 (371)
T ss_dssp             CEECCHHH-----HTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTS---SEEEEESSHHH
T ss_pred             cEEecccc-----cCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCC---CEEEEeCChHH
Confidence            45677632     356689999999999886542   1  111112345677899999 9999843   28999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccC--CCCcccCCCCCCChhH
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTD--CPHYWRYAHPGETEEE  251 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  251 (514)
                      |++.+++.+.        .++++|++.+++||+..... ...|...            ..++  ....+.          
T Consensus        81 a~~~~~~~~~--------~~gd~vl~~~~~~~~~~~~~-~~~g~~~------------~~v~~~~~~~~~----------  129 (371)
T 2e7j_A           81 AKFAVMHSLA--------KKDAWVVMDENCHYSSYVAA-ERAGLNI------------ALVPKTDYPDYA----------  129 (371)
T ss_dssp             HHHHHHHHHC--------CTTCEEEEETTCCHHHHHHH-HHTTCEE------------EEECCCCTTTCC----------
T ss_pred             HHHHHHHHHh--------CCCCEEEEccCcchHHHHHH-HHcCCeE------------EEeecccCCCCC----------
Confidence            9999999873        34578999999999875442 2222211            1111  110010          


Q ss_pred             HHHHHHHHHHHHHHHhCC-CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccC
Q 010250          252 YSTRLANNLEDLILKEGP-ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYS  330 (514)
Q Consensus       252 ~~~~~~~~le~li~~~~~-~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~g  330 (514)
                         .++++|++.+.+... +++++|+++++++++|.+.+    +++|.++|++||+++|+||+|+. |..+  .....+ 
T Consensus       130 ---~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~----~~~i~~~~~~~~~~li~D~a~~~-~~~~--~~~~~~-  198 (371)
T 2e7j_A          130 ---ITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPD----VKKIAKVCSEYDVPLLVNGAYAI-GRMP--VSLKEI-  198 (371)
T ss_dssp             ---CCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCC----HHHHHHHHHTTTCCEEEECTTTB-TTBC--CCHHHH-
T ss_pred             ---cCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCC----HHHHHHHHHHcCCeEEEECcccc-CCCC--CChhhc-
Confidence               115778888764321 36788999999999998887    89999999999999999999984 3332  222233 


Q ss_pred             CCCchh--chhhhhcCCcccceeEEeCHHHHHH-hhhccCCCCcccccC-----CCCCcHHHHHHHHHHHHHHhhccHHH
Q 010250          331 IKPDLV--SFAKALSSAYMPIGAILVSPEVSEV-IHSQSNTLGSFSHGF-----TYSGHPVSCAVAIEALKIYKERNIVE  402 (514)
Q Consensus       331 v~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~-l~~~~~~~~~~~~~~-----t~~~~pl~~aaa~aal~~~~~~~~~~  402 (514)
                       .+|++  +++|+++++ .++|++++++++++. +.....     ....     ++..++..++++.++++.+.+ ++.+
T Consensus       199 -~~di~~~s~sK~~~~~-~~~G~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~  270 (371)
T 2e7j_A          199 -GADFIVGSGHKSMAAS-GPIGVMGMKEEWAEIVLRRSEK-----YKNKEVELLGCTARGATIITLMASFPHVRE-RIKR  270 (371)
T ss_dssp             -TCSEEEEEHHHHSSCC-SSCEEEEECTTTTTTTTCBCSS-----CTTSBGGGTTCCCCSHHHHHHHHHHHHHHH-HGGG
T ss_pred             -CCCEEEecCCcCCCCC-CCcEEEEEechhhhhhcccccc-----CcccccccccCCcCHHHHHHHHHHHHHHHH-HHHH
Confidence             36766  568999988 599999999988776 653110     0111     455678888888888988766 6778


Q ss_pred             HH--HHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe--------e
Q 010250          403 QV--NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV--------S  472 (514)
Q Consensus       403 ~~--~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~--------~  472 (514)
                      ++  +++++++.+.|+++ ...+.....+.+.++.+.+.  .            ...+.+.|.++||.+.+        +
T Consensus       271 ~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~--~------------~~~~~~~l~~~gi~~~~~~~~~~~~g  335 (371)
T 2e7j_A          271 WDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAE--V------------LYEISKKAKGGRFFLYRELKSRKIHG  335 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECH--H------------HHHHHHHSSSGGGHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEECC--C------------HHHHHHHHHHCCEEEEeccccccccC
Confidence            88  89999999999876 32222211113667777764  1            34577788888988765        1


Q ss_pred             --CCEEE-EeCCCC-CCHHHHHHHHHHHHHHHHH
Q 010250          473 --GDNIM-MSPPFI-MSPEEVDELISKYGKALKA  502 (514)
Q Consensus       473 --g~~iR-i~p~~~-~t~e~id~~~~~l~~~l~~  502 (514)
                        .+.+| ++++.. +|++++++++++|++++++
T Consensus       336 ~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~  369 (371)
T 2e7j_A          336 IKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEK  369 (371)
T ss_dssp             SCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHh
Confidence              35689 998877 8999999999999998864

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=99.93  E-value=1.3e-25  Score=230.44  Aligned_cols=339  Identities=12%  Similarity=0.070  Sum_probs=220.9

Q ss_pred             CCCEEEEccCCcccccCC--CCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC--CCCeEEE--eCCh
Q 010250           98 NGKKYLDSLAGLWCTALG--GSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS--KMAKVFF--TNSG  171 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lG--h~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~--~~~~v~~--~~sG  171 (514)
                      .|+.+|||.+|.+.++.|  +.+|.|.+|+.+++++... +. + .+.....++.+.+++++...  ..++|+|  ++||
T Consensus        24 ~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~-y-~~~~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~  100 (394)
T 2ay1_A           24 PRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETT-KT-Y-AGLSGEPEFQKAMGELILGDGLKSETTATLATVGG  100 (394)
T ss_dssp             CCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCC-CC-C-CCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHH
T ss_pred             CCccccccccceeeCCCCCccCcHHHHHHHHHhcCCccc-CC-C-CCCCCcHHHHHHHHHHHhCCCCCcccEEEEecCCc
Confidence            466789999997655556  5689999999998764211 11 1 12233467777777775222  4578999  9999


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCCh
Q 010250          172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETE  249 (514)
Q Consensus       172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  249 (514)
                      ++|++.++++++.+      .++++|++.+++||+........+....             .++..  +.|.        
T Consensus       101 ~~a~~~~~~~~~~~------~~gd~vl~~~p~~~~~~~~~~~~g~~~~-------------~~~~~~~~~~~--------  153 (394)
T 2ay1_A          101 TGALRQALELARMA------NPDLRVFVSDPTWPNHVSIMNFMGLPVQ-------------TYRYFDAETRG--------  153 (394)
T ss_dssp             HHHHHHHHHHHHHH------CTTCCEEEEESCCHHHHHHHHHHTCCEE-------------EEECEETTTTE--------
T ss_pred             hhHHHHHHHHHHhc------CCCCEEEEcCCCChhHHHHHHHcCCceE-------------EEecccccCCc--------
Confidence            99999999987643      2346799999999997654433322111             01110  0010        


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc--ccceec
Q 010250          250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG--TMFGCD  327 (514)
Q Consensus       250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G--~~~~~~  327 (514)
                           .+.+++++.+.+. +...+++++...++++|.+ .+.+++++|.++|++||+++|+||+|++|++.|  ......
T Consensus       154 -----~d~~~l~~~l~~~-~~~~~~~~~~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~  226 (394)
T 2ay1_A          154 -----VDFEGMKADLAAA-KKGDMVLLHGCCHNPTGAN-LTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTR  226 (394)
T ss_dssp             -----ECHHHHHHHHHTC-CTTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHH
T ss_pred             -----cCHHHHHHHHHhC-CCCCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHH
Confidence                 1157788877643 2245677777777888865 567899999999999999999999999987654  222222


Q ss_pred             cc-CCCCchh---chhhhhc-CCcccceeEEe---CHHHHHHhhhccCCCCcccccCCCC-CcHHHHHHHHHHHHHH---
Q 010250          328 KY-SIKPDLV---SFAKALS-SAYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYS-GHPVSCAVAIEALKIY---  395 (514)
Q Consensus       328 ~~-gv~pDiv---~~sK~l~-gG~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~-~~pl~~aaa~aal~~~---  395 (514)
                      .+ ...+|++   ++||.++ .| +|+|++++   ++++++.+....   .. .+..++. .++++++++.++|+..   
T Consensus       227 ~~~~~~~~~i~~~s~sK~~~~~G-~riG~~~~~~~~~~~~~~l~~~~---~~-~~~~~~~~~~~~~~~a~~~~l~~~~l~  301 (394)
T 2ay1_A          227 LIASRIPEVLIAASCSKNFGIYR-ERTGCLLALCADAATRELAQGAM---AF-LNRQTYSFPPFHGAKIVSTVLTTPELR  301 (394)
T ss_dssp             HHHHHCSSEEEEEECTTTTTCGG-GCEEEEEEECSSHHHHHHHHHHH---HH-HHHTTTSSCCCHHHHHHHHHHHSHHHH
T ss_pred             HHhhcCCCEEEEEeccCCCcCcC-CccceEEEEeCCHHHHHHHHHHH---HH-HHhhhcCCCChHHHHHHHHHhcChHHH
Confidence            12 1234433   6899998 45 89999998   676654443210   00 1123443 4888898888888743   


Q ss_pred             ---h--hccHHHHHHHHHHHHHhhhhhcc---CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250          396 ---K--ERNIVEQVNKIAPKFQDGVKAFS---DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM  467 (514)
Q Consensus       396 ---~--~~~~~~~~~~~~~~l~~~L~~l~---~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv  467 (514)
                         .  -+++.++++++++++.+.|+++.   ......  ...|.++++.+.               ...+...+.++||
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~~~g~~~~~~~~---------------~~~~~~~l~~~gi  364 (394)
T 2ay1_A          302 ADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFVA--EHRGMFSRLGAT---------------PEQVKRIKEEFGI  364 (394)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHHH--HCCSSEEECCCC---------------HHHHHHHHHHHCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCeeEEc--CCceEEEeeCCC---------------HHHHHHHHHhCCE
Confidence               1  23467788888888888888762   122211  122455444331               1246667778999


Q ss_pred             EEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250          468 LVRVSGDNIMMSPPFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       468 ~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~  499 (514)
                      ++.++   +||+++ .+|++++++++++|+++
T Consensus       365 ~v~~~---~Ris~~-~~~~~~i~~~~~~l~~~  392 (394)
T 2ay1_A          365 YMVGD---SRINIA-GLNDNTIPILARAIIEV  392 (394)
T ss_dssp             ECCTT---CEEEGG-GCCTTTHHHHHHHHHHH
T ss_pred             EecCC---CeEEee-cCCHhhHHHHHHHHHHc
Confidence            98763   699976 47999999999999875

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=99.93  E-value=1.4e-24  Score=223.56  Aligned_cols=342  Identities=15%  Similarity=0.099  Sum_probs=222.3

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhc-CCc-cc-cccccCCchHHHHH----HHHHHhcCcCCCCeEEEeCChh
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNT-LPF-YH-SFWNRTTKPSLDLA----KELLEMFTASKMAKVFFTNSGS  172 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~-~~~-~~-~~~~~~~~~~~ela----~~L~~~~~~~~~~~v~~~~sGs  172 (514)
                      ++|||+.++..  ++   +|+|.+|+.+++.+ ... +. ..+....+....++    ++++++++. + ...+++++|+
T Consensus        23 ~~~i~~~~~~~--~~---~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~-~-~~~i~~~sGt   95 (407)
T 2dkj_A           23 REGLELIASEN--FV---SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGA-A-WANVQPHSGS   95 (407)
T ss_dssp             HTSEECCTTCC--CC---CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC-S-EEECCCSSHH
T ss_pred             hcceeeccCCC--CC---CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCC-C-cceEEecchH
Confidence            46899988863  33   89999999999864 222 21 11110111111222    477777732 2 2336678899


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccc--eeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCCh
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGST--LIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETE  249 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t--~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  249 (514)
                      +|++.+++.++        .++++|++.+++|++..  ...+...|....          ....++. +.+.        
T Consensus        96 ~a~~~~~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~----------~~~~~~~~~~~~--------  149 (407)
T 2dkj_A           96 QANMAVYMALM--------EPGDTLMGMDLAAGGHLTHGSRVNFSGKLYK----------VVSYGVRPDTEL--------  149 (407)
T ss_dssp             HHHHHHHHHHC--------CTTCEEEEECGGGTCCGGGTCTTSHHHHHSE----------EEEECCCTTTSS--------
T ss_pred             HHHHHHHHHhc--------CCCCEEEEecccccCccchHHHHHhcCceEE----------EEecCCCcccCc--------
Confidence            99999999873        34568999999998763  222222221000          0001100 0111        


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCcEEEEEE-ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC-cccccccceec
Q 010250          250 EEYSTRLANNLEDLILKEGPETIAAFIA-EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA-FGRLGTMFGCD  327 (514)
Q Consensus       250 ~~~~~~~~~~le~li~~~~~~~~aaviv-Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG-~gr~G~~~~~~  327 (514)
                           .++++|++.+.+.   ++++|++ +|.++   .+.+    +++|.++|++||+++|+||+|++ +...|....  
T Consensus       150 -----~d~~~l~~~l~~~---~~~~v~~~~p~~~---~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~--  212 (407)
T 2dkj_A          150 -----IDLEEVRRLALEH---RPKVIVAGASAYP---RFWD----FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPN--  212 (407)
T ss_dssp             -----CCHHHHHHHHHHH---CCSEEEECCSSCC---SCCC----HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCC--
T ss_pred             -----cCHHHHHHHHhhc---CCeEEEEeccccC---CCCC----HHHHHHHHHHcCCEEEEEccccccccccCccCC--
Confidence                 1257788877632   3455665 77775   3333    99999999999999999999984 433443221  


Q ss_pred             ccCCCCchh--chhhhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHH
Q 010250          328 KYSIKPDLV--SFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIV  401 (514)
Q Consensus       328 ~~gv~pDiv--~~sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~  401 (514)
                      ... .+|++  +++|+|+|  .++|+++++ +++++.+....      .++.+.+.++..++++.++++.+.+   +++.
T Consensus       213 ~~~-~~di~~~s~sK~l~g--~~~G~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~  283 (407)
T 2dkj_A          213 PLP-YAHVVTSTTHKTLRG--PRGGLILSNDPELGKRIDKLI------FPGIQGGPLEHVIAGKAVAFFEALQPEFKEYS  283 (407)
T ss_dssp             CTT-TCSEEEEESSGGGCC--CSCEEEEESCHHHHHHHHHHH------TTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred             ccc-cccEEEEeccccCCC--CCceEEEECCHHHHHHHHhhh------cccccCCCcHHHHHHHHHHHHHHHHhhHHHHH
Confidence            112 26877  68999986  467999999 89988876421      2334455677777778888887643   4578


Q ss_pred             HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------
Q 010250          402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---------  472 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------  472 (514)
                      ++++++++++.+.|+++ ..++... ++.|.++.+.+.....          ....+.+.|.++||++.++         
T Consensus       284 ~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~gi~v~~~~~~~~~~~~  351 (407)
T 2dkj_A          284 RLVVENAKRLAEELARR-GYRIVTG-GTDNHLFLVDLRPKGL----------TGKEAEERLDAVGITVNKNAIPFDPKPP  351 (407)
T ss_dssp             HHHHHHHHHHHHHHHHT-TCEEGGG-SCSSSEEEEECGGGTC----------CHHHHHHHHHHTTEECEECCCTTCSSCT
T ss_pred             HHHHHHHHHHHHHHHhC-CceeecC-CCCceEEEEECcccCC----------CHHHHHHHHHHcCceecCCcCccccccc
Confidence            88899999999999876 3332211 3457788888764210          1445778899999999863         


Q ss_pred             --CCEEEEeCCC----CCCHHHHHHHHHHHHHHHHH-----HHHHHHHhhh
Q 010250          473 --GDNIMMSPPF----IMSPEEVDELISKYGKALKA-----TEERVKELKS  512 (514)
Q Consensus       473 --g~~iRi~p~~----~~t~e~id~~~~~l~~~l~~-----~~~~~~~~~~  512 (514)
                        .+.+|++++.    .+|++|+++++++|++++++     +++++.++.+
T Consensus       352 ~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~  402 (407)
T 2dkj_A          352 RVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLEGPSEALREEVRRLAL  402 (407)
T ss_dssp             TTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_pred             cCCCceeeecccccccCCCHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHH
Confidence              2469999765    38999999999999999988     7777766644

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.93  E-value=1.4e-24  Score=228.12  Aligned_cols=358  Identities=14%  Similarity=0.152  Sum_probs=214.3

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT  177 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~  177 (514)
                      .|+.||||.+++++       |.|.+++.+++......   ++ ..+...+++++|+++++   .++++|++||++|++.
T Consensus        41 ~g~~ylD~~~~~~~-------~~v~~a~~~~~~~~~~~---y~-~~~~~~~l~~~la~~~~---~~~v~~t~ggt~A~~~  106 (467)
T 1ax4_A           41 SSAVYIDLLTDSGT-------NAMSDHQWAAMITGDEA---YA-GSRNYYDLKDKAKELFN---YDYIIPAHQGRGAENI  106 (467)
T ss_dssp             GGGCSEECSCSSSC-------CCEEHHHHHHHHTCCCC---SS-SCHHHHHHHHHHHHHHC---CCEEEEESSHHHHHHH
T ss_pred             CCceeeecccCcCC-------HHHHHHHHHHHhhcccc---cc-cCccHHHHHHHHHHHcC---CCcEEEcCCcHHHHHH
Confidence            47889999888653       78888888887643211   11 34556789999999983   4799999999999999


Q ss_pred             HHHHHHHHHhhcCCCCcc--EEEEEecCCc-ccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          178 QVKLVWYYNNALGRPNKK--KFIARQKSYH-GSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~--~ii~~~~~yH-G~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      |+++++.++..   +++.  .||+.  .+| +.+...+...|........    +.......+..|.+           .
T Consensus       107 al~~~~~~~~~---~Gd~~~~viv~--~~~~~~~~~~~~~~g~~~~~~~~----~~~~~~~~~~~~~~-----------~  166 (467)
T 1ax4_A          107 LFPVLLKYKQK---EGKAKNPVFIS--NFHFDTTAAHVELNGCKAINIVT----EKAFDSETYDDWKG-----------D  166 (467)
T ss_dssp             HHHHHHHHHHH---TTCCSSCEEEE--SSCCHHHHHHHHHTTCEEEECBC----GGGGCTTSCCTTTT-----------C
T ss_pred             HHHHHHHhhcc---CCCccceEEEe--ccccchhhHHHhccCCceecccc----cccccccccCCccc-----------c
Confidence            99998754322   2222  15554  455 5544444443332111000    00000000000110           0


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC--c--------ccccccc
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA--F--------GRLGTMF  324 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG--~--------gr~G~~~  324 (514)
                      .++++|++++.+...+++++|++++++|++|..+++.++|++|+++|++||++||+||++..  .        +..|...
T Consensus       167 ~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~  246 (467)
T 1ax4_A          167 FDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATI  246 (467)
T ss_dssp             BCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCH
T ss_pred             cCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCch
Confidence            12578888887543246899999999998855677789999999999999999999998752  0        2222110


Q ss_pred             eecccC----CCCchh--chhhhhcCCcccceeEE-eC-H-HHHHHhhhccCCCCcccccCCCCCcHHHHHHHHH-HHHH
Q 010250          325 GCDKYS----IKPDLV--SFAKALSSAYMPIGAIL-VS-P-EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIE-ALKI  394 (514)
Q Consensus       325 ~~~~~g----v~pDiv--~~sK~l~gG~~pig~v~-~~-~-~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~a-al~~  394 (514)
                        ...+    ..+|++  +++|+++   +|+|+++ ++ + ++++.+.....   .+....++++++..+.++.+ +++.
T Consensus       247 --~~~~~~~~~~~d~~~~s~sK~~g---~~~Gg~~~~~d~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~~l~~  318 (467)
T 1ax4_A          247 --KEVIFDMYKYADALTMSAKKDPL---LNIGGLVAIRDNEEIFTLARQRCV---PMEGFVTYGGLAGRDMAAMVQGLEE  318 (467)
T ss_dssp             --HHHHHHHGGGCSEEEEETTSTTC---CSSCEEEEESSCHHHHHHHHHHHH---HHTCSTTTTTCCHHHHHHHHHHHHH
T ss_pred             --hhhhhhhccccceEEEeccccCC---CCcceEEEeCCHHHHHHHHHhhcc---ccccccccCCccchHHHHHHHHHHH
Confidence              0000    124665  4567664   4666544 56 5 78777643110   01112345555544443333 5665


Q ss_pred             HhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEee-
Q 010250          395 YKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVS-  472 (514)
Q Consensus       395 ~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~-  472 (514)
                      +.+++..++..++++++.+.|++. +.+++...  .|.++.+.+..-. +.  .+........+...| .++||.+.+. 
T Consensus       319 ~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~--~~~~~~~~~~~~~-~~--~~~~~~~~~~l~~~L~~~~gv~v~~~g  392 (467)
T 1ax4_A          319 GTEEEYLHYRIGQVKYLGDRLREA-GIPIQYPT--GGHAVFVDCKKLV-PQ--IPGDQFPAQAVINALYLESGVRAVEIG  392 (467)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHT-TCCBCSSC--CSSEEEEESTTTC-TT--SCGGGCHHHHHHHHHHHHHCEECEEES
T ss_pred             hhhhhHHHHHHHHHHHHHHHHHhC-CCCcccCC--CceEEEEehhhhc-cc--cccCCCCHHHHHHHHHHhcCceeeecC
Confidence            443345556667788888888763 33433222  2444455521100 00  000001245678888 8899998872 


Q ss_pred             ----------C-------CEEEEeCC-CCCCHHHHHHHHHHHHHHHHHH
Q 010250          473 ----------G-------DNIMMSPP-FIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       473 ----------g-------~~iRi~p~-~~~t~e~id~~~~~l~~~l~~~  503 (514)
                                |       +.|||++| ..+|++||++++++|+++++++
T Consensus       393 ~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~  441 (467)
T 1ax4_A          393 SFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKF  441 (467)
T ss_dssp             HHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred             ccccccccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhh
Confidence                      2       57999999 5599999999999999988764

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=99.93  E-value=3e-24  Score=218.93  Aligned_cols=322  Identities=15%  Similarity=0.115  Sum_probs=219.0

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCC--CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCc
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKM--AKVFFTNSGSEANDTQVKLVWYYNNALGRPNK  194 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~--~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~  194 (514)
                      -+|+|++|+.+++...  ..   ....+...+++++++++++. ..  +++++++||++|++ +++.+.        .++
T Consensus        13 ~~~~v~~a~~~~~~~~--~~---~~~~~~~~~~~~~la~~~~~-~~~~~~v~~~~g~t~al~-~~~~~~--------~~g   77 (384)
T 3zrp_A           13 IKEDVLVAGLENNVGF--TS---KEFVEALAYSLKGLRYVMGA-SKNYQPLIIPGGGTSAME-SVTSLL--------KPN   77 (384)
T ss_dssp             CCHHHHHHTTCCSCCT--TS---HHHHHHHHHHHHHHHHHHTC-CTTSEEEEEESCHHHHHH-HGGGGC--------CTT
T ss_pred             CCHHHHHHhhcccccc--cc---HHHHHHHHHHHHHHHHHhCC-CCCCcEEEEcCCcHHHHH-HHHhhc--------CCC
Confidence            4788888887765421  11   11235567888999998853 33  78999999999999 887553        345


Q ss_pred             cEEEEEecCCcccceeee-ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEE
Q 010250          195 KKFIARQKSYHGSTLIAA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIA  273 (514)
Q Consensus       195 ~~ii~~~~~yHG~t~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~a  273 (514)
                      ++||+.+++||+.....+ ...|..            +..++.+..+.             .++++|++.+.+   .+++
T Consensus        78 d~vi~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~-------------~d~~~l~~~i~~---~~~~  129 (384)
T 3zrp_A           78 DKILVVSNGVFGDRWEQIFKRYPVN------------VKVLRPSPGDY-------------VKPGEVEEEVRK---SEYK  129 (384)
T ss_dssp             CEEEEECSSHHHHHHHHHHTTSSCE------------EEEECCSTTCC-------------CCHHHHHHHHHH---SCEE
T ss_pred             CEEEEecCCcchHHHHHHHHHcCCc------------EEEecCCCCCC-------------CCHHHHHHHHHh---CCCc
Confidence            789999999998543222 111211            11122211110             125788888864   2588


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCccccee
Q 010250          274 AFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGA  351 (514)
Q Consensus       274 avivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~  351 (514)
                      +|+++++++++|.+.|    +++|.++|++||+++|+||+|+ +|..  ....  ....+|+++  ++|+++|+ .++|+
T Consensus       130 ~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~~~~--~~~~--~~~~~d~~~~s~~K~~~~~-~g~g~  199 (384)
T 3zrp_A          130 LVALTHVETSTGVREP----VKDVINKIRKYVELIVVDGVSS-VGAE--EVKA--EEWNVDVYLTASQKALGSA-AGLGL  199 (384)
T ss_dssp             EEEEESEETTTTEECC----HHHHHHHHGGGEEEEEEECTTT-TTTS--CCCT--TTTTCSEEEEETTSTTCCC-SSEEE
T ss_pred             EEEEeCCCCCCceECc----HHHHHHHHHhcCCEEEEECccc-ccCc--cccc--cccCCCEEEecCcccccCC-CceEE
Confidence            9999999999998887    9999999999999999999997 4322  1112  223467775  45999876 67999


Q ss_pred             EEeCHHHHHHh-hhccCC--------C----Cccc--ccCCC-CCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHH
Q 010250          352 ILVSPEVSEVI-HSQSNT--------L----GSFS--HGFTY-SGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQ  412 (514)
Q Consensus       352 v~~~~~i~~~l-~~~~~~--------~----~~~~--~~~t~-~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~  412 (514)
                      +++++++++.+ ......        .    ..+.  ....+ +.++.++++..++++.+.+.   ++.++++++++++.
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~  279 (384)
T 3zrp_A          200 LLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIR  279 (384)
T ss_dssp             EEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             EEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence            99999998877 211000        0    0000  22223 44666777777888876543   57788899999999


Q ss_pred             hhhhhccCCCceeEE--EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC----CEEEEeCCCCCCH
Q 010250          413 DGVKAFSDSPIIGEI--RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG----DNIMMSPPFIMSP  486 (514)
Q Consensus       413 ~~L~~l~~~~~~~~v--~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g----~~iRi~p~~~~t~  486 (514)
                      +.|+++ ...+....  ...+.++.+.+...            ....+.+.|.++||.+.++.    +.||++++..+|+
T Consensus       280 ~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~gi~v~~g~~~~~~~iRi~~~~~~~~  346 (384)
T 3zrp_A          280 AGLEAL-GLEIVARRPESYSNTVTGVILKVA------------DPQKVLAGTVNEGVEFAPGVHPAFKYFRIGHMGWVTP  346 (384)
T ss_dssp             HHHHHT-TCCBSCSSGGGBCSSEEEEECSSS------------CHHHHHHHHHTTTCCCEECCCTTCCEEEEECCSSCCH
T ss_pred             HHHHHC-CCeEccCcccccCccEEEEECCCC------------CHHHHHHHHHHCCEEEecCCCCCcCEEEEeccccCCH
Confidence            999876 33322211  12355666766531            14568899999999999876    7799999989999


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 010250          487 EEVDELISKYGKALKATE  504 (514)
Q Consensus       487 e~id~~~~~l~~~l~~~~  504 (514)
                      +|+++++++|+++++++.
T Consensus       347 e~i~~~~~~l~~~l~~~~  364 (384)
T 3zrp_A          347 NDAIIAISVIERTLRKLG  364 (384)
T ss_dssp             HHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHcC
Confidence            999999999999998754

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=99.93  E-value=2.8e-24  Score=223.61  Aligned_cols=347  Identities=8%  Similarity=0.041  Sum_probs=218.7

Q ss_pred             EEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccccc-ccCCchHHHHHHHHHHhcC---cCCCCeEEEeC
Q 010250           94 VYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFW-NRTTKPSLDLAKELLEMFT---ASKMAKVFFTN  169 (514)
Q Consensus        94 ~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~-~~~~~~~~ela~~L~~~~~---~~~~~~v~~~~  169 (514)
                      ..+.+|+.+|||.+|   .+.-..+|.|++|+.+++++....+... ..+.....+|.+.+++++.   ....++++|++
T Consensus        50 ~~~~~~~~~i~l~~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~  126 (432)
T 3ei9_A           50 LLKYPDAQVISLGIG---DTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSD  126 (432)
T ss_dssp             HHHCTTCCCEECSSC---CCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEES
T ss_pred             hhcCCCCCeEEccCC---CCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECC
Confidence            344568899999988   4444589999999999998643222111 1123345678888887751   23457899999


Q ss_pred             ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCCh
Q 010250          170 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE  249 (514)
Q Consensus       170 sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (514)
                      |+++++..+..++         .+++.|++.+++|++.............+. ........+..+++...          
T Consensus       127 G~~~al~~l~~l~---------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~----------  186 (432)
T 3ei9_A          127 GAKCDISRLQVMF---------GSNVTIAVQDPSYPAYVDSSVIMGQTGQFN-TDVQKYGNIEYMRCTPE----------  186 (432)
T ss_dssp             CHHHHHHHHHHHH---------CTTCCEEEEESCCTHHHHHHHHHTCSCCEE-TTTTEETTCEEEECCGG----------
T ss_pred             ChHHHHHHHHHHc---------CCCCEEEEeCCCCHHHHHHHHHcCCccccc-ccccccCceEEeccCcc----------
Confidence            9999998743332         245789999999999754443332211110 00000001111111100          


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceeccc
Q 010250          250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY  329 (514)
Q Consensus       250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~  329 (514)
                      ..+    ..++++     . .++.+|+++..++++|.+. +.+.|++|.++|++||+++|+||+|++|...+.......+
T Consensus       187 ~~~----~~~l~~-----~-~~~~~v~l~~p~NPtG~~~-~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~  255 (432)
T 3ei9_A          187 NGF----FPDLST-----V-GRTDIIFFCSPNNPTGAAA-TREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEI  255 (432)
T ss_dssp             GTT----SCCGGG-----C-CCCSEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGS
T ss_pred             cCC----cCChhh-----C-CCCCEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhc
Confidence            000    011221     1 2344455555567777654 5678999999999999999999999988555443222222


Q ss_pred             -C---CCCchhchhhhhc-CCcccceeEEeCHHH--------HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH-
Q 010250          330 -S---IKPDLVSFAKALS-SAYMPIGAILVSPEV--------SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY-  395 (514)
Q Consensus       330 -g---v~pDiv~~sK~l~-gG~~pig~v~~~~~i--------~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~-  395 (514)
                       +   ....+.++||.++ .| +++|++++++++        ++.+..       .....+++.++++++++.++++.. 
T Consensus       256 ~~~~~~~i~~~S~SK~~g~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~  327 (432)
T 3ei9_A          256 PGAEEVAMETASFSNYAGFTG-VRLGWTVIPKKLLYSDGFPVAKDFNR-------IICTCFNGASNISQAGALACLTPEG  327 (432)
T ss_dssp             TTGGGTEEEEEESHHHHCTTT-TCCEEEECCTTCBCTTSCBHHHHHHH-------HHHHSCCCSCHHHHHHHHHHSSHHH
T ss_pred             CCCCCeEEEEecchhccCCcc-cceEEEEEChHHhhcchHHHHHHHHH-------HhccccCCCCHHHHHHHHHHHhccc
Confidence             1   1122447999998 45 899999999887        566542       122345567889999888887521 


Q ss_pred             h--hccHHHHHHHHHHHHHhhhhhccCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEe
Q 010250          396 K--ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRV  471 (514)
Q Consensus       396 ~--~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~  471 (514)
                      .  -+++.++++++.+++++.|+++ ....   .. ..|.++++.+....            ...+...|++ .||++.+
T Consensus       328 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~---~~~~~~~~~~~~~~~~~------------~~~~~~~ll~~~gv~v~~  391 (432)
T 3ei9_A          328 LEAMHKVIGFYKENTNIIIDTFTSL-GYDV---YGGKNAPYVWVHFPNQS------------SWDVFAEILEKTHVVTTP  391 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHT-TCCE---EECSSSSEEEEECTTSC------------HHHHHHHHHHHHCEECEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHC-Ccee---cCCCcceEEEEECCCCC------------HHHHHHHHHHHCCEEEeC
Confidence            1  1456778888889999988876 2222   22 24667777775211            3346666665 5999986


Q ss_pred             e-------CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          472 S-------GDNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       472 ~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      +       .+.|||+  +..++++|++++++|++.-
T Consensus       392 g~~f~~~~~~~iRis--~~~~~e~l~~~l~rl~~~~  425 (432)
T 3ei9_A          392 GSGFGPGGEGFVRVS--AFGHRENILEACRRFKQLY  425 (432)
T ss_dssp             GGGGCGGGTTEEEEE--CCSCHHHHHHHHHHHHHHH
T ss_pred             chHhCCCCCCEEEEE--ecCCHHHHHHHHHHHHHHh
Confidence            4       3579999  6789999999999998653

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=99.92  E-value=8.5e-25  Score=223.76  Aligned_cols=324  Identities=14%  Similarity=0.126  Sum_probs=218.2

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccE
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK  196 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~  196 (514)
                      .+|+|++|+.+++..  +++.   ...+...+++++++++++....+++++++||++|++.+++.+.        .++++
T Consensus        34 ~~~~v~~a~~~~~~~--~~~~---~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~--------~~gd~  100 (393)
T 3kgw_A           34 LAPRVLAAGSLRMIG--HMQK---EMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLL--------EPGDS  100 (393)
T ss_dssp             CCHHHHHHTTCCCCC--TTSH---HHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHC--------CTTCE
T ss_pred             CCHHHHHHhcccccC--cccH---HHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcC--------CCCCE
Confidence            578888888765422  1111   1234567889999998854433469999999999999999773        34578


Q ss_pred             EEEEecCCcccce-eeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250          197 FIARQKSYHGSTL-IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF  275 (514)
Q Consensus       197 ii~~~~~yHG~t~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav  275 (514)
                      |++...+|||... ......|...            ..++.+..+             ..++++|++.+.+.   ++++|
T Consensus       101 vl~~~~~~~~~~~~~~~~~~g~~~------------~~~~~~~~~-------------~~d~~~l~~~i~~~---~~~~v  152 (393)
T 3kgw_A          101 FLTGTNGIWGMRAAEIADRIGARV------------HQMIKKPGE-------------HYTLQEVEEGLAQH---KPVLL  152 (393)
T ss_dssp             EEEEESSHHHHHHHHHHHHTTCEE------------EEEECCTTC-------------CCCHHHHHHHHHHH---CCSEE
T ss_pred             EEEEeCCchhHHHHHHHHHcCCce------------EEEeCCCCC-------------CCCHHHHHHHHhhC---CCcEE
Confidence            9998888876431 1111222111            111111110             01257888888642   46788


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEE
Q 010250          276 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAIL  353 (514)
Q Consensus       276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~  353 (514)
                      +++++++.+|.+.+    +++|+++|++||+++|+||+|+ +|  +..+..+.+  .+|+++++  |+++|+ .++|+++
T Consensus       153 ~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~-~g--~~~~~~~~~--~~d~~~~s~sK~~~~~-~g~g~~~  222 (393)
T 3kgw_A          153 FLVHGESSTGVVQP----LDGFGELCHRYQCLLLVDSVAS-LG--GVPIYMDQQ--GIDIMYSSSQKVLNAP-PGISLIS  222 (393)
T ss_dssp             EEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-TT--TSCCCTTTT--TCCEEEEESSSTTCCC-SSCEEEE
T ss_pred             EEeccCCcchhhcc----HHHHHHHHHHcCCEEEEECCcc-cc--Ccccchhhc--CCCEEEecCcccccCC-CceeEEE
Confidence            88888999998877    8999999999999999999997 43  112333333  35776655  999876 6799999


Q ss_pred             eCHHHHHHhhhccCCCCcc----------------cccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhh
Q 010250          354 VSPEVSEVIHSQSNTLGSF----------------SHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDG  414 (514)
Q Consensus       354 ~~~~i~~~l~~~~~~~~~~----------------~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~  414 (514)
                      +++++++.+.........+                ....+++.++.+++++.++++.+.+   +++.++++++++++.+.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~  302 (393)
T 3kgw_A          223 FNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKH  302 (393)
T ss_dssp             ECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred             ECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence            9999999886432111111                0112345578888888888887765   45688899999999999


Q ss_pred             hhhccCCCcee-E-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee-----CCEEEEeC-CCCCC
Q 010250          415 VKAFSDSPIIG-E-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS-----GDNIMMSP-PFIMS  485 (514)
Q Consensus       415 L~~l~~~~~~~-~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~-----g~~iRi~p-~~~~t  485 (514)
                      |+++ ...... . ....+.+..+.+.+..           ....+.+.|+++ ||++.++     ++.+|+++ ++.+|
T Consensus       303 L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~  370 (393)
T 3kgw_A          303 LQEM-GLKFFVKDPEIRLPTITTVTVPAGY-----------NWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNAT  370 (393)
T ss_dssp             HHHT-TCCBSSSSGGGBCSSEEEEECCTTB-----------CHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCC
T ss_pred             HHHc-CCeeccCChhhcCCeEEEEeCCCCC-----------CHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCC
Confidence            9886 322211 1 1122455566664321           145688888888 9999863     36799998 77789


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 010250          486 PEEVDELISKYGKALKAT  503 (514)
Q Consensus       486 ~e~id~~~~~l~~~l~~~  503 (514)
                      ++|+++++++|+++++++
T Consensus       371 ~~~i~~~~~~l~~~l~~~  388 (393)
T 3kgw_A          371 TENVDRVAEALREALQHC  388 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhh
Confidence            999999999999998764

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=99.92  E-value=7.9e-25  Score=226.67  Aligned_cols=345  Identities=9%  Similarity=0.040  Sum_probs=217.7

Q ss_pred             CCEEEEccCCcccccCCC--CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCC---eEEEeCChh
Q 010250           99 GKKYLDSLAGLWCTALGG--SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMA---KVFFTNSGS  172 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh--~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~---~v~~~~sGs  172 (514)
                      |+.+|||..|....+-++  .+|.|.+++.+........+.    +.....++.+.+++++.. .+.+   ++++++||+
T Consensus        37 ~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~  112 (418)
T 3rq1_A           37 RENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYA----PIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGT  112 (418)
T ss_dssp             GGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHHHSCC----CTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHH
T ss_pred             CCCeEECCCCcccCCCCCccccHHHHHHHHHhcccccCCCC----CCCChHHHHHHHHHHHhcccCccccccEEECCchH
Confidence            557788877743211222  467777776553321111111    111234455555554311 1245   899999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC-CCcccCCCCCCChhH
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC-PHYWRYAHPGETEEE  251 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  251 (514)
                      +|+..+++...        ..+++|++.+++|++........+....             .+++ +..|.          
T Consensus       113 ~al~~~~~~l~--------~~gd~Vl~~~p~~~~~~~~~~~~g~~~~-------------~v~~~~~~~~----------  161 (418)
T 3rq1_A          113 GGIHHLIHNYT--------EPGDEVLTADWYWGAYRVICSDTGRTLV-------------TYSLFDEHNN----------  161 (418)
T ss_dssp             HHHHHHHHHHS--------CTTCEEEEESSCCTHHHHHHHHTTCEEE-------------EECSBCTTSS----------
T ss_pred             HHHHHHHHHhc--------CCCCEEEECCCCchhHHHHHHHcCCEEE-------------EEeeeCCCCC----------
Confidence            99999998763        3357899999999987644333222111             1111 00011          


Q ss_pred             HHHHHHHHHHHHHHHh-CCCcEEEEEEc-cccCCCCcccCChhHHHHHHHHHH------hcCCEEEEechhcCcccccc-
Q 010250          252 YSTRLANNLEDLILKE-GPETIAAFIAE-PVIGAGGVIPPPATYFEKVQAVVK------KYDILFIADEVICAFGRLGT-  322 (514)
Q Consensus       252 ~~~~~~~~le~li~~~-~~~~~aavivE-pv~~~~G~~~p~~~~L~~l~~l~~------~~gillI~DEv~tG~gr~G~-  322 (514)
                         .++++|++.+.+. .++..++++++ |.++++|.+. +.+.+++|.++|+      +||+++|+||+|.+|++.|. 
T Consensus       162 ---~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~-~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~  237 (418)
T 3rq1_A          162 ---FNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSI-EDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDE  237 (418)
T ss_dssp             ---BCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCC-CHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHH
T ss_pred             ---cCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHH
Confidence               1157777777542 11234456665 5377888665 5567999999999      89999999999999987764 


Q ss_pred             --cceecccCCCCch---h--chhhhhcCCcccceeEEe---CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHH
Q 010250          323 --MFGCDKYSIKPDL---V--SFAKALSSAYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEAL  392 (514)
Q Consensus       323 --~~~~~~~gv~pDi---v--~~sK~l~gG~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal  392 (514)
                        .+.....++.+|+   +  +|||.++.+++++|++++   ++++++.+.....   ....+.....++++++++.++|
T Consensus       238 ~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~l  314 (418)
T 3rq1_A          238 VRAFFNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNK---STSRATWSNICRPAMRTMANIV  314 (418)
T ss_dssp             HHGGGGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHH---HHHHHHTSSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHH---HHHhhccCCCchHHHHHHHHHh
Confidence              2233444566663   2  689998754489999999   9999888864210   0011122356788888887777


Q ss_pred             HHH------hh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH
Q 010250          393 KIY------KE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK  464 (514)
Q Consensus       393 ~~~------~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~  464 (514)
                      +..      .+  +++.++++++.+++.+.|+++ ...+..  ...|.++++.+.+              ...+.+.|.+
T Consensus       315 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~~--------------~~~~~~~l~~  377 (418)
T 3rq1_A          315 ADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLPMLP--YRGGFFITIPTDS--------------ANAICEELKK  377 (418)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCCCC--CCSSSEEEEECTT--------------HHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCC--CCceEEEEcCCCC--------------HHHHHHHHHh
Confidence            432      11  245677888888888888876 333221  1123344444321              3457788999


Q ss_pred             CCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          465 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       465 ~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      +||++.++++.+||+.. .+++++|++++++|+++++++
T Consensus       378 ~gi~v~~g~~~iRis~~-~~~~~~i~~~~~~l~~~l~~~  415 (418)
T 3rq1_A          378 EHIYVIALANGIRIAAC-GIPKCQMTGLAEKIYNAMKSL  415 (418)
T ss_dssp             TTEECEECSSEEEEEGG-GSCHHHHTTHHHHHHHHHHHT
T ss_pred             CCEEEecCCCCeEEEEe-cCCHHHHHHHHHHHHHHHHHH
Confidence            99999998889999943 369999999999999998764

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=99.92  E-value=9.4e-24  Score=218.33  Aligned_cols=347  Identities=11%  Similarity=0.055  Sum_probs=219.9

Q ss_pred             CEEEEccCCcccc-cCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-----------cCCCCeEEE
Q 010250          100 KKYLDSLAGLWCT-ALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-----------ASKMAKVFF  167 (514)
Q Consensus       100 ~~ylD~~s~~~~~-~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-----------~~~~~~v~~  167 (514)
                      +.+|||.+|.... +-.+.+|++.+++.+++++.... . +. ......++.+.+++++.           ..+.++|++
T Consensus        33 ~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~-~-y~-~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~  109 (416)
T 1bw0_A           33 KPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECN-G-YF-PTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVL  109 (416)
T ss_dssp             SCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSS-S-CC-CTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEE
T ss_pred             CCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccC-C-cC-CCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEE
Confidence            5689998885432 12347899999999998753211 0 11 11223456666665553           024678999


Q ss_pred             eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCC
Q 010250          168 TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHP  245 (514)
Q Consensus       168 ~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  245 (514)
                      ++||++|++.+++.+.        .++++|++.+++||+....... .|....            .++...  .|.    
T Consensus       110 ~~g~~~al~~~~~~l~--------~~gd~vl~~~p~y~~~~~~~~~-~g~~~~------------~v~~~~~~~~~----  164 (416)
T 1bw0_A          110 CSGGSHGILMAITAIC--------DAGDYALVPQPGFPHYETVCKA-YGIGMH------------FYNCRPENDWE----  164 (416)
T ss_dssp             ESHHHHHHHHHHHHHC--------CTTCEEEEEESCCTHHHHHHHH-TTCEEE------------EEEEEGGGTTE----
T ss_pred             eCChHHHHHHHHHHhC--------CCCCEEEEcCCCcHhHHHHHHH-cCcEEE------------EeecCcccCCC----
Confidence            9999999999998873        2347899999999997543322 221110            011000  000    


Q ss_pred             CCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc---
Q 010250          246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT---  322 (514)
Q Consensus       246 ~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~---  322 (514)
                               .++++|++.+.   ++..++++++| ++++|.+ .+++++++|.++|++||+++|+||+|+++.+.|.   
T Consensus       165 ---------~d~~~l~~~l~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~  230 (416)
T 1bw0_A          165 ---------ADLDEIRRLKD---DKTKLLIVTNP-SNPCGSN-FSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPN  230 (416)
T ss_dssp             ---------ECHHHHHHHCC---TTEEEEEEESS-CTTTCCC-CCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTT
T ss_pred             ---------CCHHHHHHHhc---cCCeEEEEeCC-CCCCCcc-cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCC
Confidence                     11466776654   23345556666 6667765 4678999999999999999999999998876664   


Q ss_pred             -cc-eecccCCCCc-h--hchhhhhcCCcccceeEEeCHH--HHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250          323 -MF-GCDKYSIKPD-L--VSFAKALSSAYMPIGAILVSPE--VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY  395 (514)
Q Consensus       323 -~~-~~~~~gv~pD-i--v~~sK~l~gG~~pig~v~~~~~--i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~  395 (514)
                       .+ ....++..++ +  .++||.++.+++++|+++++++  +++.+....   .. .+..+++.|+++++++.++|+..
T Consensus       231 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~a~~~~l~~~  306 (416)
T 1bw0_A          231 ATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGL---KR-VGMLVCGPCTVVQAALGEALLNT  306 (416)
T ss_dssp             CCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHH---HH-HHHHHTCSCHHHHHHHHHHHHSS
T ss_pred             CCccCHHHccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHHHHHHHH---HH-HhccccCCCcHHHHHHHHHHhcc
Confidence             22 2222222222 2  3689997654489999998663  444333100   00 12246778899999999988742


Q ss_pred             hh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEE
Q 010250          396 KE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVR  470 (514)
Q Consensus       396 ~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~  470 (514)
                      .+   ++..++++++.+++.+.|+++   +.+..+.+ .|.++++.+.....+     ... ....+...|+ ++||++.
T Consensus       307 ~~~~~~~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~l~~~~gi~v~  377 (416)
T 1bw0_A          307 PQEHLDQIVAKIEESAMYLYNHIGEC---IGLAPTMPRGAMYLMSRIDLEKYR-----DIK-TDVEFFEKLLEEENVQVL  377 (416)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTS---TTEEECCCCBTTEEEEEECGGGBS-----SCC-SHHHHHHHHHHHHCEECE
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHHhC---CCCcccCCCeeEEEEEeCCHHHcC-----CCC-CHHHHHHHHHHHCCEEEe
Confidence            22   345677888888888888765   33332323 366677777532100     000 1345777774 8899998


Q ss_pred             ee-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          471 VS-----GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       471 ~~-----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ++     .+.+|+++  ..++++|++++++|.+++++.
T Consensus       378 ~g~~f~~~~~iRis~--~~~~e~l~~~l~~l~~~l~~~  413 (416)
T 1bw0_A          378 PGTIFHAPGFTRLTT--TRPVEVYREAVERIKAFCQRH  413 (416)
T ss_dssp             EGGGGTCTTEEEEEC--CSCHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCCCeEEEEe--cCCHHHHHHHHHHHHHHHHHh
Confidence            75     35799996  578999999999999988653

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=99.92  E-value=2.1e-24  Score=222.31  Aligned_cols=336  Identities=11%  Similarity=0.069  Sum_probs=215.8

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccc-cCCchHHHHHHHHHHhcC-c-CCCCeEEEeCChhHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWN-RTTKPSLDLAKELLEMFT-A-SKMAKVFFTNSGSEA  174 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~-~~~~~~~ela~~L~~~~~-~-~~~~~v~~~~sGseA  174 (514)
                      .|+.+|||.++..  .++ .+|.|.+++.++++.........+ .+.....++.+.|++++. + ...++|++++|+++|
T Consensus        31 ~~~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~a  107 (400)
T 3asa_A           31 PQHTVINLSIGDT--TQP-LNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVD  107 (400)
T ss_dssp             TTSCCEECSSCCC--CCC-CCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHH
T ss_pred             CCCceEeccCCCC--CCC-CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHH
Confidence            3678999987743  344 689999999998875321111111 123345788899998841 2 345789999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      ++.+++++         .++++|++.+++|++....... .|...           +..++....  ..+.         
T Consensus       108 l~~~~~~~---------~~gd~Vl~~~p~y~~~~~~~~~-~g~~~-----------~~~~~~~~~--~~~~---------  155 (400)
T 3asa_A          108 LFRLLSFF---------GPNQTVAIQDPSYPAYLDIARL-TGAKE-----------IIALPCLQE--NAFF---------  155 (400)
T ss_dssp             HHHHHHHH---------CSSCEEEEEESCCHHHHHHHHH-TTCSE-----------EEEEECCGG--GTTC---------
T ss_pred             HHHHHHHc---------CCCCEEEECCCCcHHHHHHHHH-cCCcc-----------eEecccchh--cCcc---------
Confidence            99876543         2347899999999987533222 22210           001111100  0000         


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-ceecccCCCC
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-FGCDKYSIKP  333 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~~~~~~gv~p  333 (514)
                         .++++    .  +++++|+++..++++|.+ .+.+.+++|.++|++||+++|+||+|++|++.|.. .....++..+
T Consensus       156 ---~~l~~----~--~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~  225 (400)
T 3asa_A          156 ---PEFPE----D--THIDILCLCSPNNPTGTV-LNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDAR  225 (400)
T ss_dssp             ---CCCCT----T--CCCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGG
T ss_pred             ---cChhh----c--cCccEEEEeCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCC
Confidence               01111    1  245566666667778876 46789999999999999999999999988766542 2222222123


Q ss_pred             c----hhchhhhhc-CCcccceeEEeCHHH-------HHHhhhccCCCCcccccCCC-CCcHHHHHHHHHHHHHHhhccH
Q 010250          334 D----LVSFAKALS-SAYMPIGAILVSPEV-------SEVIHSQSNTLGSFSHGFTY-SGHPVSCAVAIEALKIYKERNI  400 (514)
Q Consensus       334 D----iv~~sK~l~-gG~~pig~v~~~~~i-------~~~l~~~~~~~~~~~~~~t~-~~~pl~~aaa~aal~~~~~~~~  400 (514)
                      |    +.++||.++ .| +++|++++++++       ++.+...       .+..++ +.++++++++.++|+....+++
T Consensus       226 ~~~i~~~s~sK~~g~~G-lriG~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~  297 (400)
T 3asa_A          226 FCAIEINSFSKPLGFAG-IRLGWTVIPQELTYADGHFVIQDWER-------FLSTTFNGASIPAQEAGVAGLSILPQLEA  297 (400)
T ss_dssp             GTEEEEEECCGGGTTTT-CCCEEEECCTTCBCTTSCBHHHHHHH-------HHHHHCCCCCHHHHHHHHHHHHHTTTCHH
T ss_pred             CceEEEecchhhcCCcc-hheeEEeeChhhccchhhhHHHHHHH-------HhccCccCCChHHHHHHHHHhCcHHHHHH
Confidence            4    457899997 55 899999999887       5554321       122334 5788889888888875433567


Q ss_pred             HHHHHHHHHHHHhhhhhccCCCceeEEEe-eeeeEEEE-EccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-----
Q 010250          401 VEQVNKIAPKFQDGVKAFSDSPIIGEIRG-TGLILGTE-FADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-----  472 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l~~~~~~~~v~g-~g~~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-----  472 (514)
                      .++++++++++.+.|+++ .  + ....+ .|.++++. +.+...           ...+...|++ +||++.++     
T Consensus       298 ~~~~~~~~~~l~~~L~~~-g--~-~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~~gv~v~~g~~f~~  362 (400)
T 3asa_A          298 IHYYRENSDLLRKALLAT-G--F-EVFGGEHAPYLWVKPTQANIS-----------DRDLFDFFLREYHIAITPGIGFGR  362 (400)
T ss_dssp             HHHHHHHHHHHHHHHHHT-T--C-EEEECSSSSEEEEECCCTTCC-----------TTTHHHHHHHHHSEECEEGGGGCG
T ss_pred             HHHHHHHHHHHHHHHHHC-C--C-eeeCCCCceEEEEeccCCCCC-----------HHHHHHHHHHhCCEEEeChhHhCC
Confidence            888999999999999875 2  2 22233 36677777 542211           1125566664 59999864     


Q ss_pred             --CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          473 --GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       473 --g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                        .+.|||+  +..++++|++++++|++++++.
T Consensus       363 ~~~~~iRis--~~~~~e~i~~~l~~l~~~~~~~  393 (400)
T 3asa_A          363 SGSGFVRFS--SLGKREDILAACERLQMAPALQ  393 (400)
T ss_dssp             GGTTCEEEE--CCSCHHHHHHHHHHHHC-----
T ss_pred             CCCCEEEEE--eeCCHHHHHHHHHHHHHHHHhh
Confidence              2569999  6889999999999999888654

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.92  E-value=3.7e-24  Score=221.22  Aligned_cols=342  Identities=16%  Similarity=0.144  Sum_probs=226.6

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcC-Ccccc--cc-ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTL-PFYHS--FW-NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE  173 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~-~~~~~--~~-~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse  173 (514)
                      +|+.|||+.+      .|+.+|+|.+++.+++++. .....  .+ .+..+...+++++|+++++. +.++++|++||++
T Consensus        27 ~~~~yld~~~------~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~-~~~~v~~~~g~t~   99 (416)
T 1qz9_A           27 EGVIYLDGNS------LGARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGA-RDGEVVVTDTTSI   99 (416)
T ss_dssp             TTCEECCTTT------SCCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTC-CTTSEEECSCHHH
T ss_pred             CCeEeecCCC------cCCCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCC-CcccEEEeCChhH
Confidence            4788999854      3578999999999999753 11111  11 01235667899999998843 4578999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee-cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS-LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY  252 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (514)
                      +++.+++.++..... +.++ +++|+.++.+|+.+...+. +....  ..+.     .+..++.                
T Consensus       100 al~~al~~~~~~~~~-~~~g-d~vii~~~~~~~~~~~~~~~~~~~~--~~g~-----~~~~v~~----------------  154 (416)
T 1qz9_A          100 NLFKVLSAALRVQAT-RSPE-RRVIVTETSNFPTDLYIAEGLADML--QQGY-----TLRLVDS----------------  154 (416)
T ss_dssp             HHHHHHHHHHHHHHH-HSTT-CCEEEEETTSCHHHHHHHHHHHHHH--CSSC-----EEEEESS----------------
T ss_pred             HHHHHHHhhcccccc-cCCC-CcEEEEcCCCCCchHHHHHHHHHHh--cCCc-----eEEEeCc----------------
Confidence            999999877422100 0133 3577778888886433221 10000  0000     0111111                


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC
Q 010250          253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK  332 (514)
Q Consensus       253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~  332 (514)
                          +++|++.+.    +++++|+++++++++|.+.+    +++|.++|++||+++|+||+|+ +|...  .....+  .
T Consensus       155 ----~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~~--~~~~~~--~  217 (416)
T 1qz9_A          155 ----PEELPQAID----QDTAVVMLTHVNYKTGYMHD----MQALTALSHECGALAIWDLAHS-AGAVP--VDLHQA--G  217 (416)
T ss_dssp             ----GGGHHHHCS----TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHHTCEEEEECTTT-TTTSC--CCHHHH--T
T ss_pred             ----HHHHHHHhC----CCceEEEEeccccCcccccC----HHHHHHHHHHcCCEEEEEcccc-ccCcC--CChhhc--C
Confidence                256666653    36789999999999999887    9999999999999999999997 55442  122222  3


Q ss_pred             Cchhch--hhhhcCCcccc-eeEEeCHHHHHHhhhccCCC-Cc---------c-----cccC-CCCCcHHHHHHHHHHHH
Q 010250          333 PDLVSF--AKALSSAYMPI-GAILVSPEVSEVIHSQSNTL-GS---------F-----SHGF-TYSGHPVSCAVAIEALK  393 (514)
Q Consensus       333 pDiv~~--sK~l~gG~~pi-g~v~~~~~i~~~l~~~~~~~-~~---------~-----~~~~-t~~~~pl~~aaa~aal~  393 (514)
                      +|++++  +|.+++| .++ |++++++++++.+....... +.         +     .... ..+.++.+++++.++++
T Consensus       218 ~d~~~~s~~K~l~~g-~~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~  296 (416)
T 1qz9_A          218 ADYAIGCTYKYLNGG-PGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLD  296 (416)
T ss_dssp             CSEEEECSSSTTCCC-TTCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHH
T ss_pred             CCEEEecCcccCCCC-CCCeEEEEECHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHH
Confidence            788765  5998776 677 99999999877665310000 00         0     0112 23457788888888999


Q ss_pred             HHhhc---cHHHHHHHHHHHHHhhhhhc-c--CCCceeEEE--eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250          394 IYKER---NIVEQVNKIAPKFQDGVKAF-S--DSPIIGEIR--GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH  465 (514)
Q Consensus       394 ~~~~~---~~~~~~~~~~~~l~~~L~~l-~--~~~~~~~v~--g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  465 (514)
                      .+.++   ++.++++++++++.+.|+++ .  +..+.....  ..+.++.+.+.+              ...+.+.|.++
T Consensus       297 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--------------~~~l~~~l~~~  362 (416)
T 1qz9_A          297 VFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE--------------GYAVIQALIDR  362 (416)
T ss_dssp             HHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT--------------HHHHHHHHHTT
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC--------------HHHHHHHHHhC
Confidence            87643   46788899999999999875 3  222221110  135566666532              34578889999


Q ss_pred             CcEEEee-CCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHH
Q 010250          466 GMLVRVS-GDNIMMSPP-FIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       466 Gv~~~~~-g~~iRi~p~-~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ||.+... .+.+|++++ +.+|++|+++++++|++++++.
T Consensus       363 gi~~~~~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~  402 (416)
T 1qz9_A          363 GVIGDYREPRIMRFGFTPLYTTFTEVWDAVQILGEILDRK  402 (416)
T ss_dssp             TEECEEETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             CcEeccCCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhcc
Confidence            9998764 467999987 6899999999999999988653

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.92  E-value=5e-25  Score=231.52  Aligned_cols=360  Identities=14%  Similarity=0.121  Sum_probs=209.1

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ  178 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A  178 (514)
                      |+.||||.+++++       |+|++|+.+++.....   .+ ...+...++++++++++   +.++++|++||++|++.|
T Consensus        40 ~~~ylD~~~~~~~-------~~v~~a~~~~l~~~~~---~y-~~~~~~~~l~~~la~~~---~~~~v~~t~~gt~A~~~a  105 (467)
T 2oqx_A           40 EDVFIDLLTDSGT-------GAVTQSMQAAMMRGDE---AY-SGSRSYYALAESVKNIF---GYQYTIPTHQGRGAEQIY  105 (467)
T ss_dssp             GGCSEECSCCSSC-------SCCCHHHHHHTTSCCC---CS-SSCHHHHHHHHHHHHHH---CCSEEEEEC--CCSHHHH
T ss_pred             CCeeEecccCCCc-------HHHHHHHHHHhccCcc---ee-ccCchhHHHHHHHHHHh---CcCcEEEcCCcHHHHHHH
Confidence            6789999887653       8999999988864321   11 23455678999999998   347999999999999999


Q ss_pred             HHHHHHHH-hhcCCCCccEEEEEecCCcccceeeeec-CCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250          179 VKLVWYYN-NALGRPNKKKFIARQKSYHGSTLIAASL-SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL  256 (514)
Q Consensus       179 lk~a~~~~-~~~~~~~~~~ii~~~~~yHG~t~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (514)
                      +++++..+ ...|.+++++||..  .||+.+...... .+.... ....   +.......+..+.+           ..+
T Consensus       106 l~~~~~~~~~~~G~~~~d~Ii~~--~~h~~t~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~-----------~~d  168 (467)
T 2oqx_A          106 IPVLIKKREQEKGLDRSKMVAFS--NYFFDTTQGHSQINGCTVR-NVYI---KEAFDTGVRYDFKG-----------NFD  168 (467)
T ss_dssp             HHHHHHHHHHHHCCCTTTCEEEE--SSCCHHHHHHHHHTTCEEE-ECBC---TTTTCTTSCCTTTT-----------CBC
T ss_pred             HHHHhccccccCCCCccceEEec--ccccccchhhhhccCccee-eccc---cccccCCCCCCccC-----------CcC
Confidence            99987431 11121211456654  688654222111 111110 0000   00000000000000           012


Q ss_pred             HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC----------ccccccc---
Q 010250          257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA----------FGRLGTM---  323 (514)
Q Consensus       257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG----------~gr~G~~---  323 (514)
                      +++|++++.+...+++++|+++++++++|..+++.++|++|+++|++||++||+|++|..          .+..|..   
T Consensus       169 ~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~  248 (467)
T 2oqx_A          169 LEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQ  248 (467)
T ss_dssp             HHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHH
T ss_pred             HHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHH
Confidence            578888887533236889999999888644667789999999999999999999976642          1333321   


Q ss_pred             ceecccCCCCch--hchhhhhcCCcccce-eEEeCHH-HHHHhhhccCCCCcccccCCCCCcHHHHHHHHH-HHHHHhhc
Q 010250          324 FGCDKYSIKPDL--VSFAKALSSAYMPIG-AILVSPE-VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIE-ALKIYKER  398 (514)
Q Consensus       324 ~~~~~~gv~pDi--v~~sK~l~gG~~pig-~v~~~~~-i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~a-al~~~~~~  398 (514)
                      +..+.+ ..+|+  .+++|+++   .|+| +++++++ +++.+..............+++..+..+.++++ .++...++
T Consensus       249 ~~~~~~-~~~d~~~~s~sK~~g---~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~~  324 (467)
T 2oqx_A          249 ITRETY-KYADMLAMSAKKDAM---VPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNL  324 (467)
T ss_dssp             HHHHHG-GGCSEEEEESSSTTC---CSSCEEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTCH
T ss_pred             Hhhhhh-ccCCeEEEecccccC---CCCceEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhhH
Confidence            110000 11454  46779885   3555 4556666 444332110000000011223333332222332 22322222


Q ss_pred             cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEcc--CCCCCCCCCCccch-HHHHHHHH-HHCCcEEEeeC-
Q 010250          399 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFAD--NKSPNEPFPPEWGI-GAYFGAQC-EKHGMLVRVSG-  473 (514)
Q Consensus       399 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~--~~~~~~~~~~~~~~-~~~~~~~l-~~~Gv~~~~~g-  473 (514)
                      +..++..++++++.+.|+++ +.+++ .  ..|.++.+.+..  ....      .... ...+...| .++||.+.+.+ 
T Consensus       325 ~~~~~~~~~~~~l~~~L~~~-~~~~~-~--~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~L~~~~gv~~~~~~~  394 (467)
T 2oqx_A          325 DWLAYRIAQVQYLVDGLEEI-GVVCQ-Q--AGGHAAFVDAGKLLPHIP------ADQFPAQALACELYKVAGIRAVEIGS  394 (467)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT-TCCEE-E--ECSSCEEEEHHHHSTTSC------GGGCHHHHHHHHHHHHHCEECEEESH
T ss_pred             HHHHHHHHHHHHHHHHHHHC-CCeee-c--CCceEEEEechhhcccCC------cccccHHHHHHHHHHhcCceeccccc
Confidence            35566778889999999886 44544 3  345566676642  1110      0112 44567888 88999988733 


Q ss_pred             -----------------CEEEEeCCCC-CCHHHHHHHHHHHHHHHHHH
Q 010250          474 -----------------DNIMMSPPFI-MSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       474 -----------------~~iRi~p~~~-~t~e~id~~~~~l~~~l~~~  503 (514)
                                       +.|||+++.. +|+++|++++++|+++++++
T Consensus       395 ~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~  442 (467)
T 2oqx_A          395 FLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENA  442 (467)
T ss_dssp             HHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHSG
T ss_pred             ccccccccccccccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhhh
Confidence                             5799999998 99999999999999998754

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=99.92  E-value=2.4e-24  Score=217.57  Aligned_cols=329  Identities=13%  Similarity=0.055  Sum_probs=209.0

Q ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHH
Q 010250          102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKL  181 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~  181 (514)
                      ++||.++    ..|+.+|+|.+++.+++......    .+..+...+++++++++++ .+.++++|++||++|++.+++.
T Consensus        15 ~i~l~~~----~~~~~~~~v~~a~~~~~~~~~~~----~g~~~~~~~~~~~l~~~~g-~~~~~v~~~~g~t~a~~~~~~~   85 (359)
T 1svv_A           15 PYSFVND----YSVGMHPKILDLMARDNMTQHAG----YGQDSHCAKAARLIGELLE-RPDADVHFISGGTQTNLIACSL   85 (359)
T ss_dssp             CEECSCS----CSSCCCHHHHHHHHHHTTCCCCS----TTCSHHHHHHHHHHHHHHT-CTTSEEEEESCHHHHHHHHHHH
T ss_pred             eEEecCC----CcCCCCHHHHHHHHHHHhhcccc----ccccHHHHHHHHHHHHHhC-CCCccEEEeCCchHHHHHHHHH
Confidence            5666543    35689999999999998752211    2356778889999999875 4567899999999999999998


Q ss_pred             HHHHHhhcCCCCccEEEEEecCCccccee-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHH
Q 010250          182 VWYYNNALGRPNKKKFIARQKSYHGSTLI-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL  260 (514)
Q Consensus       182 a~~~~~~~~~~~~~~ii~~~~~yHG~t~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  260 (514)
                      ++        .++++|++.+++||+.... .+...|..            +..++.. .+.             .++++|
T Consensus        86 ~~--------~~gd~vl~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~-~~~-------------~d~~~l  131 (359)
T 1svv_A           86 AL--------RPWEAVIATQLGHISTHETGAIEATGHK------------VVTAPCP-DGK-------------LRVADI  131 (359)
T ss_dssp             HC--------CTTEEEEEETTSHHHHSSTTHHHHTTCC------------EEEECCT-TSC-------------CCHHHH
T ss_pred             Hh--------CCCCEEEEcccchHHHHHHHHHhcCCCe------------eEEEeCC-CCe-------------ecHHHH
Confidence            74        2356899999999987542 11111211            1111111 111             115778


Q ss_pred             HHHHHHh---CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc--ccccccceecccC--CCC
Q 010250          261 EDLILKE---GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF--GRLGTMFGCDKYS--IKP  333 (514)
Q Consensus       261 e~li~~~---~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~--gr~G~~~~~~~~g--v~p  333 (514)
                      ++.+.+.   ...++++|+++++ +++|.+.+ .+++++|+++|++||+++|+||+|.+|  |+++..  ....+  ..+
T Consensus       132 ~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~--~~~~~~~~~~  207 (359)
T 1svv_A          132 ESALHENRSEHMVIPKLVYISNT-TEVGTQYT-KQELEDISASCKEHGLYLFLDGARLASALSSPVND--LTLADIARLT  207 (359)
T ss_dssp             HHHHHHSCSTTSCEEEEEEEESS-CTTSCCCC-HHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCC--CCHHHHHHHC
T ss_pred             HHHHHHHHhccCCCceEEEEEcC-CCCceecC-HHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcc--hhhhhhhhcC
Confidence            8887642   1224788888887 56787665 699999999999999999999999655  554421  11111  246


Q ss_pred             chhch--hhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 010250          334 DLVSF--AKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKF  411 (514)
Q Consensus       334 Div~~--sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l  411 (514)
                      |++++  +|.  ||..++|++++++++++.+...     ...++.++..++...++..+.++...-+++.++++++++++
T Consensus       208 d~~~~s~~K~--g~~~~~g~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l  280 (359)
T 1svv_A          208 DMFYIGATKA--GGMFGEALIILNDALKPNARHL-----IKQRGALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAIL  280 (359)
T ss_dssp             SEEEEECTTT--TCSSCEEEEECSGGGCTTHHHH-----HHHTTCCCTTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHH
T ss_pred             CEEEEecccC--CCCCceEEEEEcccHHHHHHHH-----HhcCCcccccchhhHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence            77654  564  3335678888899887766531     00123334323222222222332111134677888899999


Q ss_pred             HhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee---C-CEEEEeCCCCCCH
Q 010250          412 QDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS---G-DNIMMSPPFIMSP  486 (514)
Q Consensus       412 ~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~---g-~~iRi~p~~~~t~  486 (514)
                      .+.| +..+..+...  ..+.++.+.+.                ..+.+.|+++ ||++...   + +.|||++++.+|+
T Consensus       281 ~~~L-~~~~~~~~~~--~~~~~~~~~~~----------------~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~  341 (359)
T 1svv_A          281 KAGL-EACGIRLAWP--SASNQLFPILE----------------NTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEE  341 (359)
T ss_dssp             HHHH-HHTTCCBSSC--CSSSEECBEEE----------------HHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCH
T ss_pred             HHHh-ccCCeEEccC--CccceEEEEcC----------------HHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCH
Confidence            9988 4433333211  12333333332                2477888888 9998542   2 4699999999999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 010250          487 EEVDELISKYGKALKAT  503 (514)
Q Consensus       487 e~id~~~~~l~~~l~~~  503 (514)
                      +++++++++|+++++++
T Consensus       342 ~~i~~~~~~l~~~~~~~  358 (359)
T 1svv_A          342 KECHRFVEVLKRLVAST  358 (359)
T ss_dssp             HHHHHHHHHHHHC----
T ss_pred             HHHHHHHHHHHHHHhcc
Confidence            99999999999887653

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=99.92  E-value=1.2e-23  Score=216.65  Aligned_cols=325  Identities=14%  Similarity=0.148  Sum_probs=216.9

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccE
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK  196 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~  196 (514)
                      -+|+|.+|+.+++.  .++..   ...+...+++++++++++....+.+++++||++|++.+++.+.        .++++
T Consensus        24 ~~~~v~~a~~~~~~--~~~~~---~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~--------~~gd~   90 (411)
T 3nnk_A           24 ADPRVLRAMSSQLI--GQYDP---AMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAI--------RPGDK   90 (411)
T ss_dssp             CCHHHHHHHTSCCC--CTTCH---HHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHC--------CTTCE
T ss_pred             CCHHHHHHhhcccc--ccccH---HHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhc--------CCCCE
Confidence            47888888776542  11111   1124567888999998854433348899999999999999874        34678


Q ss_pred             EEEEecCCcccce-eeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250          197 FIARQKSYHGSTL-IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF  275 (514)
Q Consensus       197 ii~~~~~yHG~t~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav  275 (514)
                      |++.+++||+... ......|...            ..++.+..+.             .++++|++.+.+.   ++++|
T Consensus        91 Vl~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~-------------~d~~~l~~~i~~~---~~~~v  142 (411)
T 3nnk_A           91 VLVPVFGRFGHLLCEIARRCRAEV------------HTIEVPWGEV-------------FTPDQVEDAVKRI---RPRLL  142 (411)
T ss_dssp             EEEEECSHHHHHHHHHHHHTTCEE------------EEEECCTTCC-------------CCHHHHHHHHHHH---CCSEE
T ss_pred             EEEecCCchHHHHHHHHHHcCCeE------------EEEecCCCCC-------------CCHHHHHHHHhhC---CCeEE
Confidence            9999999998421 1111122111            1111111111             0157888888642   46788


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccceeEE
Q 010250          276 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAIL  353 (514)
Q Consensus       276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v~  353 (514)
                      +++++++.+|.+.+    +++|.++|++||+++|+||+++ +|..  .+....++  +|+++  ++|+|.|+ .++|+++
T Consensus       143 ~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~~~~--~~~~~~~~--~d~~~~s~~K~l~~~-~g~g~~~  212 (411)
T 3nnk_A          143 LTVQGDTSTTMLQP----LAELGEICRRYDALFYTDATAS-LGGN--PLETDVWG--LDAVSAGMQKCLGGP-SGTSPIT  212 (411)
T ss_dssp             EEESEETTTTEECC----CTTHHHHHHHHTCEEEEECTTT-BTTB--CCCTTTTT--CSEEECCSTTTTCCC-SSEEEEE
T ss_pred             EEeCCCCCcceecc----HHHHHHHHHHcCCEEEEECCcc-cCCc--ccchhccC--CcEEEecCccccCCC-CceEEEE
Confidence            88999999999877    8999999999999999999987 4322  22233333  56654  56998876 5899999


Q ss_pred             eCHHHHHHhhhccC----------------CCCcc------------c-ccCCCCCcHHHHHHHHHHHHHHhhc---cHH
Q 010250          354 VSPEVSEVIHSQSN----------------TLGSF------------S-HGFTYSGHPVSCAVAIEALKIYKER---NIV  401 (514)
Q Consensus       354 ~~~~i~~~l~~~~~----------------~~~~~------------~-~~~t~~~~pl~~aaa~aal~~~~~~---~~~  401 (514)
                      +++++++.+.....                ....+            . ....++.+..+++++.++++.+.++   ++.
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~  292 (411)
T 3nnk_A          213 LSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGI  292 (411)
T ss_dssp             ECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred             ECHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHH
Confidence            99999988864310                00000            0 0112345677888888888877654   567


Q ss_pred             HHHHHHHHHHHhhhhhccCCCceeE-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee-----CC
Q 010250          402 EQVNKIAPKFQDGVKAFSDSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS-----GD  474 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~~~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~-----g~  474 (514)
                      ++++++++++.+.|+++ ....... ....+.++.+.+.+..           ....+.+.|+++ ||.++++     ++
T Consensus       293 ~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~l~~~~gi~v~~g~~~~~~~  360 (411)
T 3nnk_A          293 ARHKLHGDALVKGIQAM-GLETFGDLKHKMNNVLGVVIPQGI-----------NGDQARKLMLEDFGIEIGTSFGPLHGK  360 (411)
T ss_dssp             HHHHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEECCTTC-----------CHHHHHHHHHHHHSEEEEECCGGGTTT
T ss_pred             HHHHHHHHHHHHHHHHc-CCEeCCCcccccccEEEEECCCCC-----------CHHHHHHHHHHhcCeEEeCccCCCCCC
Confidence            88899999999999876 3222211 1123556677664321           145677888876 9999863     35


Q ss_pred             EEEEeC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          475 NIMMSP-PFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       475 ~iRi~p-~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      .|||++ +...|++||++++++|+++++++.
T Consensus       361 ~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~  391 (411)
T 3nnk_A          361 VWRIGTMGYNARKDCVMTTLSALEAVLNYLK  391 (411)
T ss_dssp             EEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEEeCccCcCCHHHHHHHHHHHHHHHHHcC
Confidence            799998 778899999999999999987653

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=99.92  E-value=1.7e-23  Score=213.31  Aligned_cols=337  Identities=19%  Similarity=0.177  Sum_probs=221.0

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCC-ccc---cccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP-FYH---SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND  176 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~-~~~---~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~  176 (514)
                      .|||+.++      |+.+|+|++|+.+++++.. ..+   ...........++.+.++++++ .+.+++++++||++|++
T Consensus         3 ~yld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g-~~~~~v~~~~g~t~a~~   75 (384)
T 1eg5_A            3 VYFDNNAT------TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLG-VSPSEIFFTSCATESIN   75 (384)
T ss_dssp             EECBTTTC------CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHT-SCGGGEEEESCHHHHHH
T ss_pred             EEEecCcc------CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcC-CCCCeEEEECCHHHHHH
Confidence            58887554      4789999999999987521 110   0001123455789999999884 34568999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee--ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA--SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      .+++.+..+.   . .++++|++.+++||+......  ...|....            .++....+.             
T Consensus        76 ~~~~~~~~~~---~-~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~------------~v~~~~~~~-------------  126 (384)
T 1eg5_A           76 WILKTVAETF---E-KRKRTIITTPIEHKAVLETMKYLSMKGFKVK------------YVPVDSRGV-------------  126 (384)
T ss_dssp             HHHHHHHHHT---T-TTCCEEEECTTSCHHHHHHHHHHHHTTCEEE------------ECCBCTTSC-------------
T ss_pred             HHHHhhhhhc---c-CCCCEEEECCCCchHHHHHHHHHHhcCCEEE------------EEccCCCCc-------------
Confidence            9999885321   0 234689999999988643221  12222111            111111110             


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC--CEEEEechhcCcccccccceecccCCC
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD--ILFIADEVICAFGRLGTMFGCDKYSIK  332 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g--illI~DEv~tG~gr~G~~~~~~~~gv~  332 (514)
                      .++++|++.+.    +++++|+++++++++|.+.+    +++|.++|++||  +++|+||+|+ ||...  ....  ...
T Consensus       127 ~d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~li~Dea~~-~~~~~--~~~~--~~~  193 (384)
T 1eg5_A          127 VKLEELEKLVD----EDTFLVSIMAANNEVGTIQP----VEDVTRIVKKKNKETLVHVDAVQT-IGKIP--FSLE--KLE  193 (384)
T ss_dssp             BCHHHHHHHCC----TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHHCTTCEEEEECTTT-TTTSC--CCCT--TTC
T ss_pred             cCHHHHHHHhC----CCCeEEEEECCCCCcccccC----HHHHHHHHHhcCCceEEEEEhhhh-cCCcc--cCch--hcC
Confidence            11466776664    36788888999999998887    899999999999  9999999997 65432  2222  234


Q ss_pred             Cchhchh--hhhcCCcccceeEEeCHHH--HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHH
Q 010250          333 PDLVSFA--KALSSAYMPIGAILVSPEV--SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNK  406 (514)
Q Consensus       333 pDiv~~s--K~l~gG~~pig~v~~~~~i--~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~  406 (514)
                      +|++++|  |.++.  ..+|++++++++  ...+..    .+......+++.++++++++.++|+.+.+  +++.+++++
T Consensus       194 ~di~~~s~sK~~g~--~G~G~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~  267 (384)
T 1eg5_A          194 VDYASFSAHKFHGP--KGVGITYIRKGVPIRPLIHG----GGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEK  267 (384)
T ss_dssp             CSEEEEEGGGGTSC--TTCEEEEECTTSCCCCSBCS----SCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             CCEEEecHHHhcCC--CceEEEEEcCCCcccccccc----CcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence            7888655  97543  227999999875  211110    00001123567788889888899987543  456788888


Q ss_pred             HHHHHHhhhhhccCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------------
Q 010250          407 IAPKFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------------  472 (514)
Q Consensus       407 ~~~~l~~~L~~l~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------------  472 (514)
                      +.+++.+.|++. ...+..... +.+.+..+.+.+.            ....+.+.|.++||.+.++             
T Consensus       268 ~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~  334 (384)
T 1eg5_A          268 LRSKLVSGLMNL-GAHIITPLEISLPNTLSVSFPNI------------RGSTLQNLLSGYGIYVSTSSACTSKDERLRHV  334 (384)
T ss_dssp             HHHHHHHHHHTT-TCEECSCTTSBCTTEEEEECTTC------------CHHHHHHHHHHTTEECBC------------CH
T ss_pred             HHHHHHHHhCCC-CeEEeCCcccCCCCEEEEEeCCC------------CHHHHHHHHhhCCeEEeccccccCCCCcchHH
Confidence            899999888763 221111101 1234556655421            1456778899999998863             


Q ss_pred             -----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          473 -----------GDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       473 -----------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                                 .+.|||++...+|++|+++++++|+++++++.+
T Consensus       335 ~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~  378 (384)
T 1eg5_A          335 LDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFLDL  378 (384)
T ss_dssp             HHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC--
T ss_pred             HHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence                       146999988889999999999999999887643

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=99.92  E-value=8.8e-24  Score=213.89  Aligned_cols=336  Identities=14%  Similarity=0.178  Sum_probs=221.4

Q ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC-CCCeEEEeCChhHHHHHHHH
Q 010250          102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS-KMAKVFFTNSGSEANDTQVK  180 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~-~~~~v~~~~sGseA~~~Alk  180 (514)
                      ++||..|    +++ .+|+|++|+.+++.   +...  ....+...++.++++++++.. ..+++++++||++|++.+++
T Consensus         5 ~~~~~~g----p~~-~~~~v~~a~~~~~~---~~~~--~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~   74 (366)
T 1m32_A            5 YLLLTPG----PLT-TSRTVKEAMLFDSC---TWDD--DYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLG   74 (366)
T ss_dssp             CEECSSS----SCC-CCHHHHHTTCCCCC---TTSH--HHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHH
T ss_pred             cccccCC----CcC-CCHHHHHHHhhhhc---CCCH--HHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHH
Confidence            5787766    333 78999999877532   1111  001256678999999998521 23579999999999999998


Q ss_pred             HHHHHHhhcCCCCccEEEEEecCCccccee-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250          181 LVWYYNNALGRPNKKKFIARQKSYHGSTLI-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN  259 (514)
Q Consensus       181 ~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (514)
                      .++        ..+++||++++.||+.... .....|...            ..++.+..+             ..++++
T Consensus        75 ~~~--------~~gd~vi~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~-------------~~d~~~  121 (366)
T 1m32_A           75 SAL--------GPQDKVLIVSNGAYGARMVEMAGLMGIAH------------HAYDCGEVA-------------RPDVQA  121 (366)
T ss_dssp             HSC--------CTTCCEEEEESSHHHHHHHHHHHHHTCCE------------EEEECCTTS-------------CCCHHH
T ss_pred             Hhc--------CCCCeEEEEeCCCccHHHHHHHHHhCCce------------EEEeCCCCC-------------CCCHHH
Confidence            773        2345788888888875321 111112111            111111110             012578


Q ss_pred             HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--
Q 010250          260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--  337 (514)
Q Consensus       260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--  337 (514)
                      |++.+.+.  .++.+|++...++.+|.+.+    +++|.++|++||+++|+||+|+ +|..+  +...  ...+|+++  
T Consensus       122 l~~~l~~~--~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~~~~~--~~~~--~~~~di~~~s  190 (366)
T 1m32_A          122 IDAILNAD--PTISHIAMVHSETTTGMLNP----IDEVGALAHRYGKTYIVDAMSS-FGGIP--MDIA--ALHIDYLISS  190 (366)
T ss_dssp             HHHHHHHC--TTCCEEEEESEETTTTEECC----HHHHHHHHHHHTCEEEEECTTT-TTTSC--CCTT--TTTCSEEEEE
T ss_pred             HHHHHhcC--CCeEEEEEecccCCcceecC----HHHHHHHHHHcCCEEEEECCcc-ccCcC--cccc--ccCccEEEec
Confidence            88888652  13455655566667788877    9999999999999999999997 54442  1122  23478774  


Q ss_pred             hhhhhcCCcccceeEEeCHHHHHHhhhccCCCCc----cc-------ccCCCCCcHHHHHHHHHHHHHHhhc----cHHH
Q 010250          338 FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS----FS-------HGFTYSGHPVSCAVAIEALKIYKER----NIVE  402 (514)
Q Consensus       338 ~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~----~~-------~~~t~~~~pl~~aaa~aal~~~~~~----~~~~  402 (514)
                      ++|+++|+ .++|++++++++++.+.........    ..       ....++.++.+++++.++++.+.+.    ++.+
T Consensus       191 ~~K~~~~~-~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~  269 (366)
T 1m32_A          191 ANKCIQGV-PGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQ  269 (366)
T ss_dssp             SSSTTCCC-SSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred             CcccccCC-CceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHH
Confidence            67999776 5789999999988777532100000    00       0113577888898899999877543    4678


Q ss_pred             HHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----CCEEE
Q 010250          403 QVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----GDNIM  477 (514)
Q Consensus       403 ~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----g~~iR  477 (514)
                      +++++++++.+.|+++ ...+.... ...|.++.+.+.+... .        ....+.+.|.++||.+.++    .+.+|
T Consensus       270 ~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~~~l~~~gi~v~~~~~~~~~~iR  339 (366)
T 1m32_A          270 RYQQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYSPEDPQ-Y--------RFSEFYRRLKEQGFVIYPGKVSQSDCFR  339 (366)
T ss_dssp             HHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCCCTT-C--------CHHHHHHHHHHTTEECEECCCSSSCEEE
T ss_pred             HHHHHHHHHHHHHHHC-CCeeccCchhcCceEEEEEcCccCC-C--------CHHHHHHHHHHCCEEEECCcCCCCCEEE
Confidence            8899999999999876 33322211 1235577887753100 0        1456888999999999874    35799


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      ++++..+|++++++++++|++++++
T Consensus       340 i~~~~~~~~~~i~~~~~~l~~~~~~  364 (366)
T 1m32_A          340 IGNIGEVYAADITALLTAIRTAMYW  364 (366)
T ss_dssp             EECCSSCCHHHHHHHHHHHHHHCTT
T ss_pred             EecCCCCCHHHHHHHHHHHHHHHHh
Confidence            9999889999999999999987653

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=99.91  E-value=2.2e-23  Score=212.35  Aligned_cols=319  Identities=14%  Similarity=0.158  Sum_probs=204.6

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC-CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCcc
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK-MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK  195 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~-~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~  195 (514)
                      -+|+|++|+.+++..  +.+.   ...+...+++++++++++... .+.+++++||++|++.+++.+.        .+++
T Consensus        30 ~~~~v~~a~~~~~~~--~~~~---~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~--------~~gd   96 (376)
T 3f0h_A           30 SSEEVRAIGAEQVPY--FRTT---EFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCF--------TKKD   96 (376)
T ss_dssp             CCHHHHHHHTSCCCC--CSSH---HHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHC--------CTTC
T ss_pred             CcHHHHHHhcCCCCC--CCCH---HHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhcc--------CCCC
Confidence            478888888766532  1111   122456778888888875322 2345558999999999998774        3456


Q ss_pred             EEEEEecCCcccceee-eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEE
Q 010250          196 KFIARQKSYHGSTLIA-ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAA  274 (514)
Q Consensus       196 ~ii~~~~~yHG~t~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aa  274 (514)
                      +||+.+++||+..... ....+...            ..++.+..+..             ++++|++.+.    +++++
T Consensus        97 ~vi~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~~-------------d~~~l~~~~~----~~~~~  147 (376)
T 3f0h_A           97 KVLVIDGGSFGHRFVQLCEIHEIPY------------VALKLEHGKKL-------------TKEKLYEYDN----QNFTG  147 (376)
T ss_dssp             CEEEEESSHHHHHHHHHHHHTTCCE------------EEEECCTTCCC-------------CHHHHHTTTT----SCCCE
T ss_pred             eEEEEeCChhhHHHHHHHHHcCCce------------EEEeCCCCCCC-------------CHHHHHHhhc----cCceE
Confidence            8999998888854221 11112111            11111111110             1456665432    46778


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEe
Q 010250          275 FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILV  354 (514)
Q Consensus       275 vivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~  354 (514)
                      |+++++++.+|.+.|    +++|+++|++||+++|+||+|+++++.   +..+.+++...+.+++|+++++ .++|++++
T Consensus       148 v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~~~~~~~~~---~~~~~~~~d~~~~s~~K~l~~~-~G~g~~~~  219 (376)
T 3f0h_A          148 LLVNVDETSTAVLYD----TMMIGEFCKKNNMFFVCDCVSAFLADP---FNMNECGADVMITGSQKVLACP-PGISVIVL  219 (376)
T ss_dssp             EEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTTSC---CCHHHHTCSEEEEETTTTTCCC-SSCEEEEE
T ss_pred             EEEecccCCcceecC----HHHHHHHHHHcCCEEEEEcCccccCcc---ccccccCccEEEecCcccccCC-CceEEEEE
Confidence            889988999999887    999999999999999999999855432   3344455533444677999865 67899999


Q ss_pred             CHHHHHHhhhccCCCCcc-----------c-ccCCCCCcHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHhhhhhc
Q 010250          355 SPEVSEVIHSQSNTLGSF-----------S-HGFTYSGHPVSCAVAIEALKIYKER----NIVEQVNKIAPKFQDGVKAF  418 (514)
Q Consensus       355 ~~~i~~~l~~~~~~~~~~-----------~-~~~t~~~~pl~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~l  418 (514)
                      ++++++.+.....  ..+           . .+..+..+..+++++.++++.+.++    ++.++.+++.+++.+.|+++
T Consensus       220 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  297 (376)
T 3f0h_A          220 APRGVERVEKSKV--RTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDL  297 (376)
T ss_dssp             CHHHHHHHHTCCC--CCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred             CHHHHHHhhcCCC--CceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence            9999988864211  000           0 1123444555567777888877654    35666777777777777764


Q ss_pred             cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee-----CCEEEEeCCCCCCHHHHHHH
Q 010250          419 SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS-----GDNIMMSPPFIMSPEEVDEL  492 (514)
Q Consensus       419 ~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~-----g~~iRi~p~~~~t~e~id~~  492 (514)
                       ....... ...+.++.+.... .           ....+.+.|.++ ||.++++     ++.||++++..+|++|++++
T Consensus       298 -~~~~~~~-~~~~~~~~~~~~~-~-----------~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~  363 (376)
T 3f0h_A          298 -PFELVSE-SPANGVTSVHPTT-A-----------NAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTL  363 (376)
T ss_dssp             -SEEECCS-SBBTTEEEEEESS-S-----------CHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHH
T ss_pred             -CCccCcc-ccCceEEEEeCCC-C-----------CHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHH
Confidence             1111111 1122233332211 1           145688889988 9999864     25799999999999999999


Q ss_pred             HHHHHHHHH
Q 010250          493 ISKYGKALK  501 (514)
Q Consensus       493 ~~~l~~~l~  501 (514)
                      +++|+++++
T Consensus       364 ~~~l~~~l~  372 (376)
T 3f0h_A          364 VNAFKDLQK  372 (376)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998875

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=99.91  E-value=3.9e-23  Score=212.83  Aligned_cols=336  Identities=11%  Similarity=0.043  Sum_probs=216.9

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-ccccc---cCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWN---RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE  173 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~~~~---~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse  173 (514)
                      ++..|||+.++.      +.+|+|++|+.++++..... +..+.   ...+...++.+.++++++. +.++++|++||++
T Consensus        25 ~~~~~ld~~~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~-~~~~v~~~~g~t~   97 (406)
T 3cai_A           25 DGWVHFDAPAGM------LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNA-DPGGVVLGADRAV   97 (406)
T ss_dssp             SSCEECBGGGCC------CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTC-CGGGEEEESCHHH
T ss_pred             CCeEEEeCCCcC------CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCC-CCCeEEEeCChHH
Confidence            357899986552      57999999999998763211 11110   1234567889999998843 4568999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec---CCCccccCCCCCCCCcccccCCC-CcccCCCCCCCh
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL---SGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETE  249 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  249 (514)
                      +++.+++.....    . .++++||+.+++|++.......+   .|...            ..++.. ..+.        
T Consensus        98 al~~~~~~l~~~----~-~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v------------~~v~~~~~~~~--------  152 (406)
T 3cai_A           98 LLSLLAEASSSR----A-GLGYEVIVSRLDDEANIAPWLRAAHRYGAKV------------KWAEVDIETGE--------  152 (406)
T ss_dssp             HHHHHHHHTGGG----G-BTTCEEEEETTSCGGGTHHHHHHHHHHBCEE------------EEECCCTTTCC--------
T ss_pred             HHHHHHHHHhhc----c-CCCCEEEEcCCccHHHHHHHHHHHHhcCCeE------------EEEecCcccCC--------
Confidence            999998754100    0 23468999998888753222111   11111            111111 0000        


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceeccc
Q 010250          250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY  329 (514)
Q Consensus       250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~  329 (514)
                           .++++|++.+.    +++++|+++++++++|.+.+    +++|.++|++||+++|+||+|+ +|...  +....+
T Consensus       153 -----~d~~~l~~~l~----~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~~--~~~~~~  216 (406)
T 3cai_A          153 -----LPTWQWESLIS----KSTRLVAVNSASGTLGGVTD----LRAMTKLVHDVGALVVVDHSAA-APYRL--LDIRET  216 (406)
T ss_dssp             -----CCGGGHHHHCC----TTEEEEEEESBCTTTCBBCC----CHHHHHHHHHTTCEEEEECTTT-TTTCC--CCHHHH
T ss_pred             -----cCHHHHHHHhC----CCceEEEEeCCcCCccccCC----HHHHHHHHHHcCCEEEEEcccc-cCCCC--CCchhc
Confidence                 01356666663    46889999999999998887    8999999999999999999997 43321  222333


Q ss_pred             CCCCchhc--hhhhhcCCcccce-eEEeCHHHHHHhhhccCCCCc-cccc-CCCCCcHHHHHHHHHHHHHHhh-------
Q 010250          330 SIKPDLVS--FAKALSSAYMPIG-AILVSPEVSEVIHSQSNTLGS-FSHG-FTYSGHPVSCAVAIEALKIYKE-------  397 (514)
Q Consensus       330 gv~pDiv~--~sK~l~gG~~pig-~v~~~~~i~~~l~~~~~~~~~-~~~~-~t~~~~pl~~aaa~aal~~~~~-------  397 (514)
                      +  +|+++  ++|.++ +  ++| ++++++++++.+.+.....+. .... .....++.+++++.++++.+.+       
T Consensus       217 ~--~d~~~~s~~K~~g-~--~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~  291 (406)
T 3cai_A          217 D--ADVVTVNAHAWGG-P--PIGAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARG  291 (406)
T ss_dssp             C--CSEEEEEGGGGTS-C--SCEEEEESCHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCS
T ss_pred             C--CCEEEeehhhhcC-C--CcCeEEEEehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhcccccc
Confidence            3  67764  679764 3  388 899999988777532100000 0000 1234577777777788887754       


Q ss_pred             ----------ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250          398 ----------RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM  467 (514)
Q Consensus       398 ----------~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv  467 (514)
                                +++.++++++++++.+.|+++....+.......+.++.+.+...            ....+.+.|.++||
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~L~~~gi  359 (406)
T 3cai_A          292 SRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVHKV------------PADRVVQRLADNGI  359 (406)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEETTB------------CHHHHHHHHHHTTE
T ss_pred             chhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEECCc------------CHHHHHHHHHHCCc
Confidence                      34567777888888888876522111111111344667766421            14567888899999


Q ss_pred             EEEeeC--------------CEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250          468 LVRVSG--------------DNIMMSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       468 ~~~~~g--------------~~iRi~p~~~~t~e~id~~~~~l~~  498 (514)
                      .+.++.              +.||++++..+|++|+++++++|++
T Consensus       360 ~v~~g~~~~~~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~  404 (406)
T 3cai_A          360 LAIANTGSRVLDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALAS  404 (406)
T ss_dssp             ECEECCSCHHHHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred             EEecCChHHHHHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence            998643              5699999988999999999999875

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=99.91  E-value=8.3e-23  Score=209.25  Aligned_cols=339  Identities=14%  Similarity=0.107  Sum_probs=212.5

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEAND  176 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~  176 (514)
                      +|+.++||.+|..  .++ .+|.+.+++.+.++.....+....+..+....+++.+...++ ....+++++++||++|++
T Consensus        29 ~~~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~  105 (385)
T 1b5p_A           29 QGVDLVALTAGEP--DFD-TPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALF  105 (385)
T ss_dssp             TTCCCEECCCSSC--SSC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHH
T ss_pred             cCCCEEEecCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHH
Confidence            3566789877742  344 478999999998865321111111223334444444444332 124578999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC--cccCCCCCCChhHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH--YWRYAHPGETEEEYST  254 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  254 (514)
                      .+++...        .++++|++.+++|++....... .|...            ..++...  .|.             
T Consensus       106 ~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~-~g~~~------------~~v~~~~~~~~~-------------  151 (385)
T 1b5p_A          106 NLFQAIL--------DPGDEVIVLSPYWVSYPEMVRF-AGGVV------------VEVETLPEEGFV-------------  151 (385)
T ss_dssp             HHHHHHC--------CTTCEEEEEESCCTHHHHHHHH-TTCEE------------EEEECCGGGTTC-------------
T ss_pred             HHHHHhc--------CCCCEEEEcCCCchhHHHHHHH-cCCEE------------EEeecCcccCCC-------------
Confidence            9998763        3356899999999876433222 12111            1111110  010             


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEE-EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCC
Q 010250          255 RLANNLEDLILKEGPETIAAFI-AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP  333 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavi-vEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~p  333 (514)
                      .+.++|++.+.    +++.+|+ +.| ++++|.+. +++.+++|.++|++||+++|+||+|+.+...|.......+.-..
T Consensus       152 ~d~~~l~~~l~----~~~~~v~~~~p-~NPtG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~  225 (385)
T 1b5p_A          152 PDPERVRRAIT----PRTKALVVNSP-NNPTGAVY-PKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEH  225 (385)
T ss_dssp             CCHHHHHTTCC----TTEEEEEEESS-CTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTT
T ss_pred             CCHHHHHHhcC----CCCEEEEEeCC-CCCCCCCc-CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCC
Confidence            01456666553    2344444 455 45556544 66889999999999999999999999775444221222221112


Q ss_pred             chh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH---Hhh--ccHHHHHHH
Q 010250          334 DLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI---YKE--RNIVEQVNK  406 (514)
Q Consensus       334 Div--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~---~~~--~~~~~~~~~  406 (514)
                      +++  +|||.++..++++|++++++++++.+...       ....+++.+++++.++.++|+.   ..+  ++..+++++
T Consensus       226 ~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~  298 (385)
T 1b5p_A          226 TLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASV-------SRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRR  298 (385)
T ss_dssp             EEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHH-------HHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEechhhcCCcccceEEEEeCHHHHHHHHHH-------HhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHH
Confidence            232  68998874338999999999998887641       2234667788888888888863   222  345677888


Q ss_pred             HHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCC
Q 010250          407 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPP  481 (514)
Q Consensus       407 ~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~  481 (514)
                      +.+++.+.|+++ ...+..  ...|.++.+.+....  .        ....+.+.|.++||.+.++     .+.+||+  
T Consensus       299 ~~~~l~~~L~~~-g~~~~~--~~~~~~~~~~~~~~~--~--------~~~~l~~~l~~~gv~v~~g~~f~~~~~iRis--  363 (385)
T 1b5p_A          299 RRDLLLEGLTAL-GLKAVR--PSGAFYVLMDTSPIA--P--------DEVRAAERLLEAGVAVVPGTDFAAFGHVRLS--  363 (385)
T ss_dssp             HHHHHHHHHHHH-TCCBCC--CSBTTEEEEECTTTC--S--------SHHHHHHHHHHTTEECEESGGGTCTTEEEEE--
T ss_pred             HHHHHHHHHHHC-CCeecC--CCeeEEEEEecCCCC--C--------CHHHHHHHHHHCCeEEecccccCCCCeEEEE--
Confidence            888888888876 322221  112334555553211  0        1456778888999999875     2579999  


Q ss_pred             CCCCHHHHHHHHHHHHHHHH
Q 010250          482 FIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       482 ~~~t~e~id~~~~~l~~~l~  501 (514)
                      +..++++|++++++|.++++
T Consensus       364 ~~~~~~~i~~~l~~l~~~l~  383 (385)
T 1b5p_A          364 YATSEENLRKALERFARVLG  383 (385)
T ss_dssp             CCSCHHHHHHHHHHGGGGC-
T ss_pred             ecCCHHHHHHHHHHHHHHHh
Confidence            45899999999999987764

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=99.91  E-value=3.2e-23  Score=212.43  Aligned_cols=339  Identities=14%  Similarity=0.107  Sum_probs=220.9

Q ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCC-eEEEeCChhHHH
Q 010250           97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMA-KVFFTNSGSEAN  175 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~-~v~~~~sGseA~  175 (514)
                      .+|+.|+|..+.     ++ .+|++++|+.+++...  +.   ....+...++.+.++++++. +.+ ++++++||++|+
T Consensus        16 ~~~~~~~~~~g~-----~~-~~~~v~~a~~~~~~~~--~~---~~~~~~~~~l~~~la~~~g~-~~~~~i~~~~g~t~a~   83 (393)
T 2huf_A           16 VTPNKLLMGPGP-----SN-APQRVLDAMSRPILGH--LH---PETLKIMDDIKEGVRYLFQT-NNIATFCLSASGHGGM   83 (393)
T ss_dssp             CCCCCEECSSSC-----CC-CCHHHHHHTTSCCCCT--TS---HHHHHHHHHHHHHHHHHHTC-CCSEEEEESSCHHHHH
T ss_pred             CCCCeEEecCCC-----CC-CCHHHHHHHHhhhccC--CC---HHHHHHHHHHHHHHHHHhCC-CCCcEEEEcCcHHHHH
Confidence            356777775443     22 6899999988766431  11   11234567889999998853 333 799999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee-ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      +.+++.++        .++++|++.+++||+...... ...|..            +..++.+..+             .
T Consensus        84 ~~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~-------------~  130 (393)
T 2huf_A           84 EATLCNLL--------EDGDVILIGHTGHWGDRSADMATRYGAD------------VRVVKSKVGQ-------------S  130 (393)
T ss_dssp             HHHHHHHC--------CTTCEEEEEESSHHHHHHHHHHHHTTCE------------EEEEECCTTC-------------C
T ss_pred             HHHHHHHh--------CCCCEEEEECCCcchHHHHHHHHHcCCe------------eEEEeCCCCC-------------C
Confidence            99998873        335689999999998421111 111211            1111111110             0


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCc
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD  334 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pD  334 (514)
                      .++++|++.+.+.   ++++|+++++++++|.+.+    +++|.++|++||+++|+||+|+ +|..  .....  ...+|
T Consensus       131 ~d~~~l~~~i~~~---~~~~v~~~~~~nptG~~~~----l~~i~~~~~~~~~~li~D~a~~-~~~~--~~~~~--~~~~d  198 (393)
T 2huf_A          131 LSLDEIRDALLIH---KPSVLFLTQGDSSTGVLQG----LEGVGALCHQHNCLLIVDTVAS-LGGA--PMFMD--RWEID  198 (393)
T ss_dssp             CCHHHHHHHHHHH---CCSEEEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-BTTB--CCCTT--TTTCS
T ss_pred             CCHHHHHHHHhcc---CCcEEEEEccCCCccccCC----HHHHHHHHHHcCCEEEEEcccc-cCCC--Ccchh--hcCcc
Confidence            1157788877632   3567788888888998877    8999999999999999999986 5543  12222  22468


Q ss_pred             hhch--hhhhcCCcccceeEEeCHHHHHHhhhccCCCCccc---------------ccCCC-CCcHHHHHHHHHHHHHHh
Q 010250          335 LVSF--AKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS---------------HGFTY-SGHPVSCAVAIEALKIYK  396 (514)
Q Consensus       335 iv~~--sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~---------------~~~t~-~~~pl~~aaa~aal~~~~  396 (514)
                      ++++  +|+++|+ .++|++++++++++.+........++.               ...++ ..+..+++++.++++.+.
T Consensus       199 ~~~~s~sK~l~g~-~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~  277 (393)
T 2huf_A          199 AMYTGSQKVLGAP-PGITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMAC  277 (393)
T ss_dssp             EEECCSSSTTCCC-SSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHH
T ss_pred             EEEECCCcccccC-CCeEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHH
Confidence            7754  5998864 466999999999988864310001111               12232 345566666677888765


Q ss_pred             h---ccHHHHHHHHHHHHHhhhhhccCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEe
Q 010250          397 E---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRV  471 (514)
Q Consensus       397 ~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~  471 (514)
                      +   +++.++++++++++.+.|+++ ...+..... ..+.++.+.+....           ....+.+.|.++ ||.+.+
T Consensus       278 ~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~~gi~v~~  345 (393)
T 2huf_A          278 EEGLPALIARHEDCAKRLYRGLQDA-GFELYADPKDRLSTVTTIKVPQGV-----------DWLKAAQYAMKTYLVEISG  345 (393)
T ss_dssp             HHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCTTEEEEECCTTC-----------CHHHHHHHHHHHHCEECBC
T ss_pred             HhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCccccCCcEEEEEcCCCC-----------CHHHHHHHHHHhCCEEEec
Confidence            4   346788889999999999876 333322110 12346666664211           145677888765 999986


Q ss_pred             e-----CCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          472 S-----GDNIMMSP-PFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       472 ~-----g~~iRi~p-~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      +     .+.+|+++ ++..+++++++++++|+++++++..
T Consensus       346 g~~~~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~~  385 (393)
T 2huf_A          346 GLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAVKP  385 (393)
T ss_dssp             CCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCC
T ss_pred             CcccccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence            4     35799998 5567899999999999999877654

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.91  E-value=1.4e-23  Score=220.66  Aligned_cols=351  Identities=13%  Similarity=0.112  Sum_probs=229.1

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc----cccc-cccCCchHHHHHHHHHHhcCcCCCCeEEEeCChh
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF----YHSF-WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGS  172 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~----~~~~-~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGs  172 (514)
                      ++..|||.      +++|+.++.+.+++.++++....    .+.. .....+...++.++++++++. +.++|+|++|++
T Consensus        66 ~~~iyld~------~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~-~~~~v~~t~g~t  138 (465)
T 3e9k_A           66 ENAIYFLG------NSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGA-NEKEIALMNALT  138 (465)
T ss_dssp             CBCEECBT------TTSCCEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTC-CGGGEEECSCHH
T ss_pred             CCeEEecC------CccCCChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCC-CcCCEEEECCHH
Confidence            45678874      45788888898888887754221    1110 011224456788888888753 457999999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee---ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCCh
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETE  249 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~---~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (514)
                      +++..+++.+..    .+ ..+++||+.+++||+......   ...|.....       ..+...+.+..+.        
T Consensus       139 ~al~~~~~~~~~----~~-~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~-------~~v~~~~~~~~~~--------  198 (465)
T 3e9k_A          139 VNLHLLMLSFFK----PT-PKRYKILLEAKAFPSDHYAIESQLQLHGLNIEE-------SMRMIKPREGEET--------  198 (465)
T ss_dssp             HHHHHHHHHHCC----CC-SSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHH-------HEEEECCCTTCSS--------
T ss_pred             HHHHHHHHHhcc----cc-CCCCEEEEcCCcCCchHHHHHHHHHHcCCccee-------eeEEEecCCCCCc--------
Confidence            999999987631    11 235679999999998543211   111211000       0000011111111        


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceeccc
Q 010250          250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY  329 (514)
Q Consensus       250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~  329 (514)
                           .+.+++++++.+.. +++++|+++.+++.+|.+.+    +++|.++|++||+++|+|++|+ +|..  ......+
T Consensus       199 -----~d~~~l~~~i~~~~-~~~~lv~~~~~~n~tG~~~~----l~~i~~la~~~g~~vi~D~a~~-~g~~--~~~~~~~  265 (465)
T 3e9k_A          199 -----LRIEDILEVIEKEG-DSIAVILFSGVHFYTGQHFN----IPAITKAGQAKGCYVGFDLAHA-VGNV--ELYLHDW  265 (465)
T ss_dssp             -----CCHHHHHHHHHHHG-GGEEEEEEESBCTTTCBBCC----HHHHHHHHHHTTCEEEEECTTT-TTTS--CCCHHHH
T ss_pred             -----cCHHHHHHHHHhcC-CCeEEEEEeCcccCcceeec----HHHHHHHHHHcCCEEEEEhhhh-cCCc--CCchhhc
Confidence                 11578888886542 37899999999999999987    8999999999999999999997 4332  1222223


Q ss_pred             CCCCchhc--hhhhhcCCcccceeEEeCHHHHHHhhhccCCC--C----ccc--ccCC----------CCCcHHHHHHHH
Q 010250          330 SIKPDLVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTL--G----SFS--HGFT----------YSGHPVSCAVAI  389 (514)
Q Consensus       330 gv~pDiv~--~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~--~----~~~--~~~t----------~~~~pl~~aaa~  389 (514)
                        ..|+++  ++|.+.+|..++|++++++++.+.+.+....+  +    .+.  ..++          .+.+++++++..
T Consensus       266 --~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~  343 (465)
T 3e9k_A          266 --GVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLH  343 (465)
T ss_dssp             --TCCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHH
T ss_pred             --CCCEEEECcccccccCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHH
Confidence              357664  56999654357899999998876654311000  0    000  0011          145678888888


Q ss_pred             HHHHHHhh---ccHHHHHHHHHHHHHhhhhhc----------cCCCcee--EEEeeeeeEEEEEccCCCCCCCCCCccch
Q 010250          390 EALKIYKE---RNIVEQVNKIAPKFQDGVKAF----------SDSPIIG--EIRGTGLILGTEFADNKSPNEPFPPEWGI  454 (514)
Q Consensus       390 aal~~~~~---~~~~~~~~~~~~~l~~~L~~l----------~~~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~  454 (514)
                      ++++.+.+   +++.++..++.+++.+.|+++          ....++.  +....|.++.+.+...  .          
T Consensus       344 aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~~--~----------  411 (465)
T 3e9k_A          344 ASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSVP--N----------  411 (465)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECCT--T----------
T ss_pred             HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecCC--H----------
Confidence            88988765   457888899999999999874          1111111  1123477888877521  1          


Q ss_pred             HHHHHHHHHHCCcEEEeeC-CEEEEeC-CCCCCHHHHHHHHHHHHHHHHHH
Q 010250          455 GAYFGAQCEKHGMLVRVSG-DNIMMSP-PFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       455 ~~~~~~~l~~~Gv~~~~~g-~~iRi~p-~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                       ..+.+.|.++||++...+ +.|||+| |+.+|++||++++++|++++++.
T Consensus       412 -~~l~~~L~~~Gi~v~~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~  461 (465)
T 3e9k_A          412 -KDVFQELEKRGVVCDKRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSA  461 (465)
T ss_dssp             -CCHHHHHHTTTEECEEETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred             -HHHHHHHHHCCEEEecCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence             126788999999988664 7899999 89999999999999999988653

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=99.91  E-value=6.1e-23  Score=212.13  Aligned_cols=308  Identities=13%  Similarity=0.056  Sum_probs=192.2

Q ss_pred             HHHHHHHHHHhc----C-cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCC-CCccEEEEE-ecCCcccceeeeecCCCc
Q 010250          146 SLDLAKELLEMF----T-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR-PNKKKFIAR-QKSYHGSTLIAASLSGLP  218 (514)
Q Consensus       146 ~~ela~~L~~~~----~-~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~-~~~~~ii~~-~~~yHG~t~~~~~~s~~~  218 (514)
                      ..++.+.+++++    + ..+.++|++++||++|++.+++.+..    .+. .++.+||+. +++||+............
T Consensus        77 ~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~----~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~  152 (417)
T 3g7q_A           77 KTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAG----RRADGSTKKVLFPLAPEYIGYADSGLEDDLFV  152 (417)
T ss_dssp             HHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSB----C----CCBEEEESSCCCHHHHHC-----CCEE
T ss_pred             cHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcC----CCccCCcceEEEeCCCccccchhhccchhhhc
Confidence            456666666664    1 23568999999999999999998731    111 112378886 999999865432211100


Q ss_pred             cccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKV  297 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l  297 (514)
                          ...   +.+..++.. ..|..             ++++|+  +   . +++++|+++..++++|.+. +.+.+++|
T Consensus       153 ----~~~---~~~~~~~~~~~~~~~-------------d~~~l~--~---~-~~~~~v~~~~p~NptG~~~-~~~~~~~l  205 (417)
T 3g7q_A          153 ----SAR---PNIELLPEGQFKYHV-------------DFEHLH--I---G-EETGMICVSRPTNPTGNVI-TDEELMKL  205 (417)
T ss_dssp             ----ECC---CEEEEEGGGEEEEEC-------------CGGGCC--C---C-TTEEEEEEESSCTTTCCCC-CHHHHHHH
T ss_pred             ----ccc---CcccccCCccccccc-------------CHHHhc--c---c-cCceEEEECCCCCCCCCcc-CHHHHHHH
Confidence                000   111111100 00000             023343  1   2 3566777766677788665 55779999


Q ss_pred             HHHHHhcCCEEEEechhcCcccccccc-ee--cccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccc
Q 010250          298 QAVVKKYDILFIADEVICAFGRLGTMF-GC--DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSH  374 (514)
Q Consensus       298 ~~l~~~~gillI~DEv~tG~gr~G~~~-~~--~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~  374 (514)
                      .++|++||+++|+||+|..+ ..+..+ ..  ...+....+.++||.+..| +++|++++++++++.+..       ..+
T Consensus       206 ~~~a~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~~~G-~r~G~~~~~~~~~~~~~~-------~~~  276 (417)
T 3g7q_A          206 DRLANQHNIPLVIDNAYGVP-FPGIIFSEARPLWNPNIILCMSLSKLGLPG-SRCGIIIANDKTITAIAN-------MNG  276 (417)
T ss_dssp             HHHHHHTTCCEEEECTTCTT-TTCCBCSCCCCCCCTTEEEEEESGGGTCTT-SCCEEEECCHHHHHHHHH-------HHH
T ss_pred             HHHHHHcCCEEEEeCCCccc-cccccccccccCCCCCEEEEEechhccCCC-cceEEEEeCHHHHHHHHH-------hhc
Confidence            99999999999999999743 211111 00  1111112245799954445 899999999999988863       244


Q ss_pred             cCCCCCcHHHHHHHHHHHHHHh-----hccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCC
Q 010250          375 GFTYSGHPVSCAVAIEALKIYK-----ERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPF  448 (514)
Q Consensus       375 ~~t~~~~pl~~aaa~aal~~~~-----~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~  448 (514)
                      ..+++.++++++++.+.++...     .+.+.++++++.+.+.+.|++. ...++.......|.++++.+.....     
T Consensus       277 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~~~~~~~~~~~~-----  351 (417)
T 3g7q_A          277 IISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRRYLSEERCLIHKPEGAIFLWLWFKDLPI-----  351 (417)
T ss_dssp             HHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHCCTTTCEEECCCBSSEEEEECTTCSS-----
T ss_pred             ceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceeeCCCcceEEEEEcCCCCC-----
Confidence            5677788898888888776321     1124566777777888888763 3333322223457777888754211     


Q ss_pred             CCccchHHHHHHHHHHCCcEEEee--------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          449 PPEWGIGAYFGAQCEKHGMLVRVS--------------GDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       449 ~~~~~~~~~~~~~l~~~Gv~~~~~--------------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                           ....+...|.++||.+.++              .+.|||+++.  ++++|++++++|.++++++.+
T Consensus       352 -----~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~~--~~~~i~~~~~~l~~~l~~~~~  415 (417)
T 3g7q_A          352 -----TTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYVP--EPDKIEAGVKILAEEIERAWR  415 (417)
T ss_dssp             -----CHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESCS--CHHHHHHHHHHHHHHHHHHHH
T ss_pred             -----CHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEecC--CHHHHHHHHHHHHHHHHHHHh
Confidence                 1456788899999999863              2369999764  999999999999999987653

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=99.91  E-value=1.3e-22  Score=207.67  Aligned_cols=337  Identities=12%  Similarity=0.078  Sum_probs=223.6

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ  178 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A  178 (514)
                      ...|||..+      .++.+|.|++|+.+++... .+    ....+...++.+.++++++. +.+++++++||++|++.+
T Consensus         8 ~~~yl~~~~------~~~~~~~v~~a~~~~~~~~-~~----~~~~~~~~~l~~~la~~~g~-~~~~v~~t~g~t~a~~~~   75 (392)
T 2z9v_A            8 DPVITLTAG------PVNAYPEVLRGLGRTVLYD-YD----PAFQLLYEKVVDKAQKAMRL-SNKPVILHGEPVLGLEAA   75 (392)
T ss_dssp             CCSEECSSS------CCCCCHHHHHHTTSCCCCT-TS----HHHHHHHHHHHHHHHHHTTC-SSCCEEESSCTHHHHHHH
T ss_pred             CcceeecCC------CcCCCHHHHHHHhcccccc-cc----HHHHHHHHHHHHHHHHHhCC-CCCEEEEeCCchHHHHHH
Confidence            346888643      3467899999988776541 11    11234567889999998853 357899999999999999


Q ss_pred             HHHHHHHHhhcCCCCccEEEEEecCCcccceeee-ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      ++.+.        .++++|++.+++||+.....+ ...|...            ..++.+..+             ..++
T Consensus        76 ~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~-------------~~d~  122 (392)
T 2z9v_A           76 AASLI--------SPDDVVLNLASGVYGKGFGYWAKRYSPHL------------LEIEVPYNE-------------AIDP  122 (392)
T ss_dssp             HHHHC--------CTTCCEEEEESSHHHHHHHHHHHHHCSCE------------EEEECCTTS-------------CCCH
T ss_pred             HHHhc--------CCCCEEEEecCCcccHHHHHHHHHcCCce------------EEeeCCCCC-------------CCCH
Confidence            98873        334689999999988631111 1112111            111111110             0125


Q ss_pred             HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc
Q 010250          258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS  337 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~  337 (514)
                      ++|++.+.+.  +++++|+++++++++|.+.+    +++|.++|++||+++|+||+|+ +|...  +....  ..+|+++
T Consensus       123 ~~l~~~l~~~--~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~~--~~~~~--~~~d~~~  191 (392)
T 2z9v_A          123 QAVADMLKAH--PEITVVSVCHHDTPSGTINP----IDAIGALVSAHGAYLIVDAVSS-FGGMK--THPED--CKADIYV  191 (392)
T ss_dssp             HHHHHHHHHC--TTCCEEEEESEEGGGTEECC----HHHHHHHHHHTTCEEEEECTTT-BTTBS--CCGGG--GTCSEEE
T ss_pred             HHHHHHHhcC--CCCcEEEEeccCCCCceecc----HHHHHHHHHHcCCeEEEEcccc-cCCcc--ccccc--ccceEEE
Confidence            7788877541  24678888999999998877    8999999999999999999997 54331  22222  2467775


Q ss_pred             --hhhhhcCCcccceeEEeCHHHHHHhhhcc-----CCCC------cc--cccCCCCCcHHHHHHHHHHHHHHhhc---c
Q 010250          338 --FAKALSSAYMPIGAILVSPEVSEVIHSQS-----NTLG------SF--SHGFTYSGHPVSCAVAIEALKIYKER---N  399 (514)
Q Consensus       338 --~sK~l~gG~~pig~v~~~~~i~~~l~~~~-----~~~~------~~--~~~~t~~~~pl~~aaa~aal~~~~~~---~  399 (514)
                        ++|+++|+ .++|++++++++++.+....     ...+      .+  ......+.++.+++++.++++.+.+.   +
T Consensus       192 ~s~sK~~~~~-~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~  270 (392)
T 2z9v_A          192 TGPNKCLGAP-PGLTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEA  270 (392)
T ss_dssp             ECSSSTTCCC-SCCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred             ecCcccccCC-CceeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence              56988875 56799999999988775311     0000      00  00112345677777777888876543   4


Q ss_pred             HHHHHHHHHHHHHhhhhhccCCCcee-E-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee----
Q 010250          400 IVEQVNKIAPKFQDGVKAFSDSPIIG-E-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS----  472 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l~~~~~~~-~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~----  472 (514)
                      +.++++++++++++.|+++ ...+.. . ....+.++.+.+.+..           ....+.+.|.++ ||.+.++    
T Consensus       271 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~L~~~~gi~v~~g~~~~  338 (392)
T 2z9v_A          271 VWARHALTAKAMRAGVTAM-GLSVWAASDSIASPTTTAVRTPDGV-----------DEKALRQAARARYGVVFSSGRGET  338 (392)
T ss_dssp             HHHHHHHHHHHHHHHHHHT-TCCBSSSSGGGBCTTEEEEECCTTC-----------CHHHHHHHHHHHHCEECEECCGGG
T ss_pred             HHHHHHHHHHHHHHHHHHc-CCeeccCCccccCCceEEEECCCCC-----------CHHHHHHHHHhcCCEEEecCCCCC
Confidence            6788888999999999876 333221 1 0113556677664211           145688889887 9999874    


Q ss_pred             -CCEEEEeCCC-CCCHHHHHHHHHHHHHHHHHHH
Q 010250          473 -GDNIMMSPPF-IMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       473 -g~~iRi~p~~-~~t~e~id~~~~~l~~~l~~~~  504 (514)
                       .+.+|+++.. .+|++|+++++++|+++++++.
T Consensus       339 ~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~  372 (392)
T 2z9v_A          339 LGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAG  372 (392)
T ss_dssp             TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcC
Confidence             3679999643 7899999999999999987654

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=99.90  E-value=2.1e-23  Score=216.27  Aligned_cols=345  Identities=12%  Similarity=0.066  Sum_probs=216.3

Q ss_pred             EEccCCcccccCCCCCHHHHHHHH--HHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH--HH
Q 010250          103 LDSLAGLWCTALGGSEPRLVAAAT--AQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND--TQ  178 (514)
Q Consensus       103 lD~~s~~~~~~lGh~~p~v~~A~~--~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~--~A  178 (514)
                      |||..|.....+...+|.|.+++.  +.++. ......|..+.....++.+.|++++. .+.+++++++|+++|+.  .+
T Consensus        28 i~l~~g~p~~~~~~~~~~v~~a~~~~~~~~~-~~~~~~Yp~~~~g~~~lr~~ia~~~~-~~~~~i~~t~G~~~al~~~~~  105 (423)
T 3ez1_A           28 LNMQRGQPADADFDLSNGLLTVLGAEDVRMD-GLDLRNYPGGVAGLPSARALFAGYLD-VKAENVLVWNNSSLELQGLVL  105 (423)
T ss_dssp             EESCCCCCCHHHHHTTGGGGGSCCGGGCEET-TEETTSSCSCTTCCHHHHHHHHHHTT-SCGGGEEECSSCHHHHHHHHH
T ss_pred             EecCCCCCChHhCCCcHHHHHHHhhhHHhhc-chhhhCCCCCCCChHHHHHHHHHHhC-CChhhEEEeCCcHHHHHHHHH
Confidence            565555332222333445666664  33321 11001110123345789999999874 45679999999999997  78


Q ss_pred             HHHHHHHHhhcCCCC--------ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250          179 VKLVWYYNNALGRPN--------KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE  250 (514)
Q Consensus       179 lk~a~~~~~~~~~~~--------~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (514)
                      ++....     +.++        +++|++.+++|++........+....             .++...      .+    
T Consensus       106 ~~~l~~-----~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~-------------~v~~~~------~g----  157 (423)
T 3ez1_A          106 TFALLH-----GVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELL-------------TVDMQS------DG----  157 (423)
T ss_dssp             HHHHHT-----CCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEE-------------EEEEET------TE----
T ss_pred             HHHHhc-----cCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEE-------------eccCCC------CC----
Confidence            776541     1122        47899999999987543332221111             000000      00    


Q ss_pred             HHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHH-HhcCCEEEEechhcCccccc-c-----
Q 010250          251 EYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVV-KKYDILFIADEVICAFGRLG-T-----  322 (514)
Q Consensus       251 ~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~-~~~gillI~DEv~tG~gr~G-~-----  322 (514)
                          .++++|++.+.+  ..++++|+++| .++++|.+. +.+.+++|.++| ++||+++|+||+|+.+...+ .     
T Consensus       158 ----~d~~~l~~~l~~--~~~~~~v~~~~~~~NPtG~~~-~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~  230 (423)
T 3ez1_A          158 ----PDVDAVERLAGT--DPSVKGILFVPTYSNPGGETI-SLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPV  230 (423)
T ss_dssp             ----ECHHHHHHHHHS--CTTEEEEEECSSSCTTTCCCC-CHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCC
T ss_pred             ----CCHHHHHHHHhh--CCCceEEEECCCCCCCCCcCC-CHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCc
Confidence                125778887752  24678888876 466677665 456799999999 99999999999998432222 1     


Q ss_pred             -ccee----cccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH-Hh
Q 010250          323 -MFGC----DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI-YK  396 (514)
Q Consensus       323 -~~~~----~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~-~~  396 (514)
                       .+..    +..+....+.+|||.+.+| +++|++++++++++.+..       .....+++.+++++.++.++++. ..
T Consensus       231 ~~~~~~~~~~~~~~~i~~~S~sK~~~~G-~r~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~  302 (423)
T 3ez1_A          231 NFVVLARDAGYPDRAFVFASTSKITFAG-AGLGFVASSEDNIRWLSK-------YLGAQSIGPNKVEQARHVKFLTEYPG  302 (423)
T ss_dssp             CHHHHHHHHTCTTSEEEEEESTTTSCSS-SSCEEEEECHHHHHHHHH-------HHHHSCSCCCHHHHHHHHHHHHHSTT
T ss_pred             chhhhhhccCCCCeEEEEeCchhhccCC-cceEEEEeCHHHHHHHHH-------HHhhhccCCCHHHHHHHHHHHHhccc
Confidence             1111    1112222355899985555 899999999999988864       23446778889998888888775 11


Q ss_pred             ---h--ccHHHHHHHHHHHHHhhhhh-ccCCC-cee-EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcE
Q 010250          397 ---E--RNIVEQVNKIAPKFQDGVKA-FSDSP-IIG-EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGML  468 (514)
Q Consensus       397 ---~--~~~~~~~~~~~~~l~~~L~~-l~~~~-~~~-~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~  468 (514)
                         +  ++..+.++++.+.+.+.|.+ +...+ .+. .....|.++++.+....            ...+.+.|.++||+
T Consensus       303 ~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~------------~~~~~~~l~~~gv~  370 (423)
T 3ez1_A          303 GLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYATWTLPKGGYFISLDTAEPV------------ADRVVKLAEAAGVS  370 (423)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEEECCCSBSSCEEEEESSSC------------HHHHHHHHHHTTEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceEEeCCCccEEEEEECCCCc------------HHHHHHHHHHCCcE
Confidence               1  12334444555555565644 23333 222 12345778888886421            45677889999999


Q ss_pred             EEee-----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          469 VRVS-----------GDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       469 ~~~~-----------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      +.++           .+.|||+++.. ++++|++++++|.++++++..
T Consensus       371 v~~~g~~~~~~~~~~~~~iRis~~~~-~~~~i~~~~~~l~~~l~~~~~  417 (423)
T 3ez1_A          371 LTPAGATYPAGQDPHNRNLRLAPTRP-PVEEVRTAMQVVAACIRLATE  417 (423)
T ss_dssp             CCCTTTTSSTTCCSSSCEEEECCSSS-CHHHHHHHHHHHHHHHHHHHH
T ss_pred             EecCcccccCCCCCCCCeEEEEcCCC-CHHHHHHHHHHHHHHHHHHHH
Confidence            9872           25799998655 999999999999999987654

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=99.90  E-value=1.7e-22  Score=211.51  Aligned_cols=351  Identities=16%  Similarity=0.120  Sum_probs=212.6

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT  177 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~  177 (514)
                      .|+.||||.++.++..+   .+++.+++.    ...   ..+. ..+...+|++.|++++   +.+++++++||++|++.
T Consensus        40 ~~~~ylD~~~~~~~~~~---~~~~~~a~~----~~~---~~y~-~~~~~~~l~~~la~~~---~~~~~~~~~~gt~a~~~  105 (456)
T 2ez2_A           40 SKDIYIDLLTDSGTNAM---SDKQWAGMM----MGD---EAYA-GSENFYHLERTVQELF---GFKHIVPTHQGRGAENL  105 (456)
T ss_dssp             GGGCSEECSCSSSCCCC---CHHHHHHHT----TCC---CCSS-SCHHHHHHHHHHHHHH---CCSEEEEESSHHHHHHH
T ss_pred             cccceeeeccccCCccC---CHHHHHHhh----cch---hhcc-cChhHHHHHHHHHHHh---CCCcEEEeCCcHHHHHH
Confidence            46789999887554322   466666654    211   1112 3456788999999998   34689999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      +++.+.       .++  + |+.+++||+.+...+...|.........   +... ......|.+           ..++
T Consensus       106 al~~l~-------~~g--d-i~~~~~~~~~~~~~~~~~G~~~~~v~~~---~~~~-~~~~~~~~~-----------~~d~  160 (456)
T 2ez2_A          106 LSQLAI-------KPG--Q-YVAGNMYFTTTRYHQEKNGAVFVDIVRD---EAHD-AGLNIAFKG-----------DIDL  160 (456)
T ss_dssp             HHHHHC-------CTT--C-EEEESSCCHHHHHHHHHTTCEEEECBCG---GGGC-TTCCCSCTT-----------CBCH
T ss_pred             HHHHhC-------CCC--C-EeccccccchhHHHHHHcCCEEEEeccc---cccc-ccccccccC-----------CCCH
Confidence            998773       133  2 7888999887655554444322111100   0000 000000000           0125


Q ss_pred             HHHHHHHHHhCCCcEEEEEEc-cccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC----------cccccccce-
Q 010250          258 NNLEDLILKEGPETIAAFIAE-PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA----------FGRLGTMFG-  325 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivE-pv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG----------~gr~G~~~~-  325 (514)
                      ++|++++.......+++|+++ |.|+.+|. +.+.+++++|+++|++||+++|+||+|+.          +++.|..+. 
T Consensus       161 ~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~-~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~  239 (456)
T 2ez2_A          161 KKLQKLIDEKGAENIAYICLAVTVNLAGGQ-PVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAE  239 (456)
T ss_dssp             HHHHHHHHHHCGGGEEEEEEESSBTTTTSB-CCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHH
T ss_pred             HHHHHHHHhccccceeEEEEeccCCCCCCc-cCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhh
Confidence            788888875432356888888 55557885 56789999999999999999999999983          335553221 


Q ss_pred             -ecccCCCCchhchh-hhhcCCcccceeEEe-CHHHHHHhhhccCCCCccccc-CCCC-CcHHHHHH-HHHHHHHHhhcc
Q 010250          326 -CDKYSIKPDLVSFA-KALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHG-FTYS-GHPVSCAV-AIEALKIYKERN  399 (514)
Q Consensus       326 -~~~~gv~pDiv~~s-K~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~-~t~~-~~pl~~aa-a~aal~~~~~~~  399 (514)
                       .+..+..+|++++| |.++++. ..|++++ ++++++.+....    ...++ .++. .++..+++ +.+.++.++ ++
T Consensus       240 ~~~~~~~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~a~a~~~~~~~~-~~  313 (456)
T 2ez2_A          240 IVHEMFSYADGCTMSGKKDCLVN-IGGFLCMNDDEMFSSAKELV----VVYEGMPSYGGLAGRDMEAMAIGLREAMQ-YE  313 (456)
T ss_dssp             HHHHHHTTCSEEEEETTTTTCCS-SCEEEEESCHHHHHHHHHHH----HHHTCCTTTTTCCHHHHHHHHHHHHHHTC-HH
T ss_pred             hhhhhcccCCEEEEeCcccCCCC-ceeEEEECCHHHHHHHHHHH----hhccCcccccCcchhHHHHHHHHHHHHhH-HH
Confidence             01223447888774 6565421 3677887 688887765311    00111 1222 23333333 555554432 35


Q ss_pred             HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEcc--CCCCCCCCCCccch-HHHHHHHH-HHCCcEEEee---
Q 010250          400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFAD--NKSPNEPFPPEWGI-GAYFGAQC-EKHGMLVRVS---  472 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~--~~~~~~~~~~~~~~-~~~~~~~l-~~~Gv~~~~~---  472 (514)
                      +.++.+++.+++++.|+++ +.+++..  ..|.++.+.+..  ....      ...+ ...+...| .++||.+.+.   
T Consensus       314 ~~~~~~~~~~~l~~~L~~~-g~~~~~p--~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~L~~~~gv~~~~~g~~  384 (456)
T 2ez2_A          314 YIEHRVKQVRYLGDKLKAA-GVPIVEP--VGGHAVFLDARRFCEHLT------QDEFPAQSLAASIYVETGVRSMERGII  384 (456)
T ss_dssp             HHHHHHHHHHHHHHHHHHT-TCCBCSS--CCSSEEEEEHHHHTTTSC------GGGCHHHHHHHHHHHHHSEECEEESHH
T ss_pred             HHHHHHHHHHHHHHHHhcC-CCccccC--CCceEEEEEhHHhcCCCC------hhhccHHHHHHHHHHhcCeeeeccccc
Confidence            6777788888888888874 3333222  235566666532  1100      1112 34456677 6889986431   


Q ss_pred             ---------------CCEEEEeCCCC-CCHHHHHHHHHHHHHHHHHH
Q 010250          473 ---------------GDNIMMSPPFI-MSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       473 ---------------g~~iRi~p~~~-~t~e~id~~~~~l~~~l~~~  503 (514)
                                     .+.|||++++. +|+++|++++++|++++++.
T Consensus       385 ~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~  431 (456)
T 2ez2_A          385 SAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQHK  431 (456)
T ss_dssp             HHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHHHHHHHHHHTG
T ss_pred             ccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhh
Confidence                           15799999987 89999999999999988653

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=99.90  E-value=2.1e-22  Score=214.40  Aligned_cols=340  Identities=14%  Similarity=0.078  Sum_probs=207.3

Q ss_pred             CCCHHHHHHHHHHHhcCCc----cccccccCCchHHHHHHHHHHhcCcC-CCCeE--EEeCChhHHHHHHHHHHHHHHhh
Q 010250          116 GSEPRLVAAATAQLNTLPF----YHSFWNRTTKPSLDLAKELLEMFTAS-KMAKV--FFTNSGSEANDTQVKLVWYYNNA  188 (514)
Q Consensus       116 h~~p~v~~A~~~~l~~~~~----~~~~~~~~~~~~~ela~~L~~~~~~~-~~~~v--~~~~sGseA~~~Alk~a~~~~~~  188 (514)
                      |+++.+.+++.+++.....    .+..+........+++++++++++.. ..+++  +|++||++|++.++++++.+..+
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~  186 (514)
T 3mad_A          107 HGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARA  186 (514)
T ss_dssp             CCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhh
Confidence            3567777777776653211    11111112233455667778877422 11466  99999999999999999755322


Q ss_pred             cCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC
Q 010250          189 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG  268 (514)
Q Consensus       189 ~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~  268 (514)
                      .....+++||+..++|++....... .|..            +..+++...++             .++++|++++.   
T Consensus       187 ~~g~~~d~Vi~~~~~~~~~~~~~~~-~G~~------------v~~v~~~~~~~-------------~d~~~Le~~i~---  237 (514)
T 3mad_A          187 TKGITAPEAVVPVSAHAAFDKAAQY-FGIK------------LVRTPLDADYR-------------ADVAAMREAIT---  237 (514)
T ss_dssp             HHCCSSCEEEEETTSCTHHHHHHHH-HTCE------------EEEECBCTTSC-------------BCHHHHHHHCC---
T ss_pred             hcCCCCCeEEEeCccchHHHHHHHH-cCCe------------eEEeeeCCCCC-------------CCHHHHHHHhc---
Confidence            1112346888888888875322221 1211            11122211111             11577777764   


Q ss_pred             CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc-----ccccc---cceecccCCCCchhchhh
Q 010250          269 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF-----GRLGT---MFGCDKYSIKPDLVSFAK  340 (514)
Q Consensus       269 ~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~-----gr~G~---~~~~~~~gv~pDiv~~sK  340 (514)
                       +++++|+++++++++|.+.+    +++|+++|++||++||+||+|+|+     +++|.   .+.....|++..+.+++|
T Consensus       238 -~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K  312 (514)
T 3mad_A          238 -PNTVVVAGSAPGYPHGVVDP----IPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHK  312 (514)
T ss_dssp             -TTEEEEEEETTCTTTCCCCC----HHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTT
T ss_pred             -cCCEEEEEeCCCCCCccccC----HHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccCCCCcEEEECchh
Confidence             46889999999999998876    999999999999999999999976     34444   233344455322335669


Q ss_pred             hhcCCcccceeEEeCHHHHHHhhhcc--CCCC-----cccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Q 010250          341 ALSSAYMPIGAILVSPEVSEVIHSQS--NTLG-----SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQD  413 (514)
Q Consensus       341 ~l~gG~~pig~v~~~~~i~~~l~~~~--~~~~-----~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~  413 (514)
                      .+.+| .++|+++++++.+.......  ...+     ....++++..+.+++.+++..+....-+++.+++.++++++.+
T Consensus       313 ~l~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~  391 (514)
T 3mad_A          313 YGYGA-KGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKA  391 (514)
T ss_dssp             TTCCC-SSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCC-CCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence            87776 68999999877654432100  0000     0012222222234444444444332224678888899999999


Q ss_pred             hhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--CCEEEEeCC-CCCCHHHHH
Q 010250          414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--GDNIMMSPP-FIMSPEEVD  490 (514)
Q Consensus       414 ~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--g~~iRi~p~-~~~t~e~id  490 (514)
                      .|+++....++...   ..++.+.....            ....+.+.|.++||++...  ++.+|++++ ...++++|+
T Consensus       392 ~L~~~~g~~~~~~~---~~~~~~~~~~~------------~~~~l~~~L~~~Gi~v~g~~~~~~~Ri~~~~~~~~~e~i~  456 (514)
T 3mad_A          392 GVRAIPSLKILGDP---LWVIAVASDEL------------NIYQVMEEMAGRGWRLNGLHRPPAFHVALTLRHTEPGVVD  456 (514)
T ss_dssp             HHHTSTTCEESSCC---SSEEEEECSSS------------CHHHHHHHHHTTTCBCEEETTTTEEEEECCGGGGSTTHHH
T ss_pred             HHhhCCCeEEeCCC---eEEEEEeCCCC------------CHHHHHHHHHhcCCEeccCCCCCeEEEEEecCCCCHHHHH
Confidence            99876332222211   23445543211            1456889999999988433  467999987 455679999


Q ss_pred             HHHHHHHHHHHHHHH
Q 010250          491 ELISKYGKALKATEE  505 (514)
Q Consensus       491 ~~~~~l~~~l~~~~~  505 (514)
                      +++++|+++++++.+
T Consensus       457 ~~l~~L~~~l~~~~~  471 (514)
T 3mad_A          457 RFLADLQDAVAQVRA  471 (514)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999987654

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=99.90  E-value=3.9e-23  Score=208.59  Aligned_cols=326  Identities=15%  Similarity=0.138  Sum_probs=200.9

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV  179 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al  179 (514)
                      ..+|||.++    +.++.+|+|++|+.+++..  +. .. .+..+...+++++++++++  ...+++|++||++|++.++
T Consensus         7 ~~~id~~~~----~~~~~~~~v~~a~~~~~~~--~~-~~-~~~~~~~~~l~~~la~~~g--~~~~v~~~~~gt~a~~~al   76 (356)
T 1v72_A            7 PPALGFSSD----NIAGASPEVAQALVKHSSG--QA-GP-YGTDELTAQVKRKFCEIFE--RDVEVFLVPTGTAANALCL   76 (356)
T ss_dssp             CCCCBCSCG----GGCCCCHHHHHHHHHTTSS--CC-CS-TTCSHHHHHHHHHHHHHHT--SCCEEEEESCHHHHHHHHH
T ss_pred             CceEeeccC----CccCCCHHHHHHHHhhccC--cc-cc-cccchHHHHHHHHHHHHhC--CCCcEEEeCCccHHHHHHH
Confidence            468999876    2367899999999988632  11 11 2245667889999999985  2345899999999999999


Q ss_pred             HHHHHHHhhcCCCCccEEEEEecCCcccceee--eecC--CCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIA--ASLS--GLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~--~~~s--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      +.++        ..++.|++.+ .+|+.+...  +...  |...            ..++.+ .+.             .
T Consensus        77 ~~~~--------~~gd~vi~~~-~~~~~~~~~~~~~~~~~g~~~------------~~v~~~-~~~-------------~  121 (356)
T 1v72_A           77 SAMT--------PPWGNIYCHP-ASHINNDECGAPEFFSNGAKL------------MTVDGP-AAK-------------L  121 (356)
T ss_dssp             HTSC--------CTTEEEEECT-TSHHHHSSTTHHHHHTTSCEE------------EECCCG-GGC-------------C
T ss_pred             HHhc--------CCCCEEEEcC-ccchhhhhchHHHHHhCCcEE------------EEecCC-CCe-------------E
Confidence            8763        2234566554 455544322  2222  2211            111111 010             1


Q ss_pred             HHHHHHH-HHHHh---CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc--cccccceeccc
Q 010250          256 LANNLED-LILKE---GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG--RLGTMFGCDKY  329 (514)
Q Consensus       256 ~~~~le~-li~~~---~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g--r~G~~~~~~~~  329 (514)
                      ++++|++ .+.+.   ...++++|++++.++ +|.+ ++.+++++|+++|++||+++|+||+|..+.  ..|..  ...+
T Consensus       122 d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~-~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~  197 (356)
T 1v72_A          122 DIVRLRERTREKVGDVHTTQPACVSITQATE-VGSI-YTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCS--PAEM  197 (356)
T ss_dssp             CHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCC-CCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCC--TTTT
T ss_pred             cHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCcc-CCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCC--HHHh
Confidence            2567777 66431   112688999998654 7754 577999999999999999999999997431  11211  1112


Q ss_pred             C--CCCchhc--hhhhhcCCcccce--eEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc---cH
Q 010250          330 S--IKPDLVS--FAKALSSAYMPIG--AILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER---NI  400 (514)
Q Consensus       330 g--v~pDiv~--~sK~l~gG~~pig--~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~---~~  400 (514)
                      +  ...|+++  ++|+  |  .|+|  ++++++++++.+....    . ..+........   ++.++++.++++   ++
T Consensus       198 ~~~~~~d~~~~s~sK~--g--~~~G~g~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~---~~~~~~~~l~~~~~~~~  265 (356)
T 1v72_A          198 TWKAGVDALSFGATKN--G--VLAAEAIVLFNTSLATEMSYRR----K-RAGHLSSKMRF---LSAQIDAYLTDDLWLRN  265 (356)
T ss_dssp             TGGGTCCEEEECCGGG--T--CSSCEEEEESSGGGHHHHHHHH----H-HTTCCCSSTHH---HHHHHHHHTSTTHHHHH
T ss_pred             hhhhcCCEEEEecccC--C--CcCccEEEEECHHHHhhHHHHh----h-ccCchhhhHHH---HHHHHHHHHHhhhHHHH
Confidence            1  1356554  6787  3  4777  6667899888765310    0 11111221222   233344544432   34


Q ss_pred             HHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CCEEE
Q 010250          401 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDNIM  477 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~iR  477 (514)
                      .++.+++++++++.|+++....+.  ....+.++.+.+.                ..+.+.|.++||.+.++   .+.+|
T Consensus       266 ~~~~~~~~~~l~~~L~~~~g~~~~--~~~~~~~~~~~~~----------------~~~~~~l~~~gi~v~~g~~~~~~iR  327 (356)
T 1v72_A          266 ARKANAAAQRLAQGLEGLGGVEVL--GGTEANILFCRLD----------------SAMIDALLKAGFGFYHDRWGPNVVR  327 (356)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTEEEE--SCCCSSEEEEEEC----------------HHHHHHHHHTTCBCBCSSSSTTEEE
T ss_pred             HHHHHHHHHHHHHHHhhCCCcEEc--cCCCccEEEEEcC----------------HHHHHHHHhcCeEEeccccCCCeEE
Confidence            667778888888888764221111  1123445555542                13778889999999854   36799


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      +++++.+|++++++++++|++++++..
T Consensus       328 i~~~~~~~~~~i~~~~~~l~~~l~~~~  354 (356)
T 1v72_A          328 FVTSFATTAEDVDHLLNQVRLAADRTQ  354 (356)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHTC----
T ss_pred             EEecCCCCHHHHHHHHHHHHHHHHhhc
Confidence            999999999999999999999876543

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=99.90  E-value=4.1e-22  Score=206.92  Aligned_cols=304  Identities=13%  Similarity=0.138  Sum_probs=202.0

Q ss_pred             CCchHHHHHHHHHHhcCcCC--------CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee
Q 010250          142 TTKPSLDLAKELLEMFTASK--------MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS  213 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~--------~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~  213 (514)
                      ..+....+++.+.+.++...        .++|++++|+++|++.+++...        ..+++|++.+++|++.......
T Consensus        80 ~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~--------~~gd~Vlv~~p~y~~~~~~~~~  151 (425)
T 2r2n_A           80 IPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMII--------NPGDNVLLDEPAYSGTLQSLHP  151 (425)
T ss_dssp             CHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHC--------CTTCEEEEESSCCHHHHHHHGG
T ss_pred             CHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhC--------CCCCEEEEeCCCcHHHHHHHHH
Confidence            33455566666655543211        2689999999999999998873        2347899999999987543322


Q ss_pred             cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC--------CCcEEEEEEcc-ccCCC
Q 010250          214 LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG--------PETIAAFIAEP-VIGAG  284 (514)
Q Consensus       214 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~--------~~~~aavivEp-v~~~~  284 (514)
                      . |....            .++...           +   ..+.++|++++.+..        ..++++|++.| .++.+
T Consensus       152 ~-g~~~~------------~v~~~~-----------~---~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPt  204 (425)
T 2r2n_A          152 L-GCNII------------NVASDE-----------S---GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPT  204 (425)
T ss_dssp             G-TCEEE------------EECEET-----------T---EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTT
T ss_pred             c-CCEEE------------EeCcCC-----------C---CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCC
Confidence            2 21110            011100           0   012577888875321        13466777755 56777


Q ss_pred             CcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eeccc---CCCCchhchhhhhcCCcccceeEEeCHHHHH
Q 010250          285 GVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKY---SIKPDLVSFAKALSSAYMPIGAILVSPEVSE  360 (514)
Q Consensus       285 G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~---gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~  360 (514)
                      |.+ .+.+.+++|.++|++||+++|+||+|+++.+.|... ....+   +....+.+|||.++.| +++|++++++++++
T Consensus       205 G~~-~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~G-lRiG~~~~~~~l~~  282 (425)
T 2r2n_A          205 GNS-LTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSG-LRIGFLTGPKPLIE  282 (425)
T ss_dssp             CCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCST-TCCEEEEEEHHHHH
T ss_pred             CCc-CCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCc-cceEEEecCHHHHH
Confidence            866 467889999999999999999999999886666421 11112   2223344799999855 89999999999988


Q ss_pred             HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-------ccHHHHHHHHHHHHHhhhhhc-cCCCcee-EEEeee
Q 010250          361 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-------RNIVEQVNKIAPKFQDGVKAF-SDSPIIG-EIRGTG  431 (514)
Q Consensus       361 ~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-------~~~~~~~~~~~~~l~~~L~~l-~~~~~~~-~v~g~g  431 (514)
                      .+..       .....+++.++++++++.++|+.+.+       +++.++++++.+++.+.|++. ..  +.. .....|
T Consensus       283 ~l~~-------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--~~~~~~p~~g  353 (425)
T 2r2n_A          283 RVIL-------HIQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTG--LAEWHVPAAG  353 (425)
T ss_dssp             HHHH-------HHHTTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS--SEEECCCSBS
T ss_pred             HHHH-------HHHHhcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CeEEeCCCce
Confidence            8863       23345678899999999998886432       234556666777777777653 21  111 123456


Q ss_pred             eeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          432 LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------GDNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       432 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------g~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      .++++++.....          ..+.+.+.|.++||.+.++          .+.+||++.. .++++|++++++|+++++
T Consensus       354 ~~~~~~~~~~~~----------~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~l~  422 (425)
T 2r2n_A          354 MFLWIKVKGIND----------VKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSS-ASPEQMDVAFQVLAQLIK  422 (425)
T ss_dssp             SEEEEEETTCSC----------CHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECSS-CCHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEeCCCCC----------HHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeCC-CCHHHHHHHHHHHHHHHH
Confidence            778888864211          1223567888999999863          2579999653 699999999999999886


Q ss_pred             H
Q 010250          502 A  502 (514)
Q Consensus       502 ~  502 (514)
                      +
T Consensus       423 ~  423 (425)
T 2r2n_A          423 E  423 (425)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=99.90  E-value=1.8e-22  Score=210.65  Aligned_cols=309  Identities=16%  Similarity=0.113  Sum_probs=194.1

Q ss_pred             HHHHHHHHHHhc----C-cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCc-------------cEEEEE-ecCCcc
Q 010250          146 SLDLAKELLEMF----T-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK-------------KKFIAR-QKSYHG  206 (514)
Q Consensus       146 ~~ela~~L~~~~----~-~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~-------------~~ii~~-~~~yHG  206 (514)
                      ..++.+.|++++    + ..+.++|+|++||++|++.+++.+..       ++.             .+||+. +++|++
T Consensus        85 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~-------~gd~~~~~~~~~~g~~~~vi~~~~p~~~~  157 (444)
T 3if2_A           85 DSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGG-------AFVNEHSQDKESKSVDKSILLPLTPEYIG  157 (444)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSE-------EEECC-------CEEEEEEEESSSSCCGG
T ss_pred             CHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhC-------CCccccccccccccccceEEEeCCCCccc
Confidence            355666666654    1 23568999999999999999987631       111             046654 888988


Q ss_pred             cceeeeecCCCccccCCCCCCCCcccccCCCC-----cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcccc
Q 010250          207 STLIAASLSGLPALHQKFDLPAPFVLHTDCPH-----YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI  281 (514)
Q Consensus       207 ~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~  281 (514)
                      ..........    ....+   +.+..++...     .|.             .++++|++.+.+.. +++++|+++..+
T Consensus       158 ~~~~~~~~~~----~~~~~---~~~~~~~~~~~~g~~~~~-------------~d~~~l~~~l~~~~-~~~~~v~i~~p~  216 (444)
T 3if2_A          158 YSDVHVEGQH----FAAVL---PHIDEVTHDGEEGFFKYR-------------VDFEALENLPALKE-GRIGAICCSRPT  216 (444)
T ss_dssp             GTTCCSSSCC----EEECC---CEEEEEEETTEEEEEEEE-------------CCHHHHHTCHHHHT-TCEEEEEEESSC
T ss_pred             hhhcccccch----hhccC---ceEEecccccccCccccC-------------CCHHHHHHHHHhcC-CCceEEEeCCCC
Confidence            7543211000    00000   1111111110     000             01467777654333 346666665556


Q ss_pred             CCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-e--cccCCCCchhchhhhhcCCcccceeEEeCHHH
Q 010250          282 GAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-C--DKYSIKPDLVSFAKALSSAYMPIGAILVSPEV  358 (514)
Q Consensus       282 ~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~--~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i  358 (514)
                      +++|.+. +.+.+++|.++|++||+++|+||+|..+ ..+..+. .  ...+...++.++||.+..| +++|++++++++
T Consensus       217 nptG~~~-~~~~l~~i~~~a~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G-~r~G~~~~~~~l  293 (444)
T 3if2_A          217 NPTGNVL-TDEEMAHLAEIAKRYDIPLIIDNAYGMP-FPNIIYSDAHLNWDNNTILCFSLSKIGLPG-MRTGIIVADAKV  293 (444)
T ss_dssp             TTTCCCC-CHHHHHHHHHHHHHTTCCEEEECTTCTT-TTCCBCSCCCCCCCTTEEEEEESTTTTCGG-GCCEEEECCHHH
T ss_pred             CCCCCcC-CHHHHHHHHHHHHHCCCEEEEECCCCCc-ccccccccccccCCCCEEEEechhhccCCC-CceEEEEECHHH
Confidence            7778755 5677999999999999999999999732 1111110 0  1122223355799974445 899999999999


Q ss_pred             HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-----hccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeee
Q 010250          359 SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-----ERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGL  432 (514)
Q Consensus       359 ~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-----~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~  432 (514)
                      ++.+..       ..+..+++.++++++++.+.++...     .+.+.++++++.+.+.+.|.+. ....+.......|.
T Consensus       294 ~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~g~  366 (444)
T 3if2_A          294 IEAVSA-------MNAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLMIHKPEGAI  366 (444)
T ss_dssp             HHHHHH-------HHHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEEEECCCBSS
T ss_pred             HHHHHH-------HHHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCceEecCCccE
Confidence            988864       2344567778888888887776322     1235566777777787777653 33332222234577


Q ss_pred             eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---------------CEEEEeCCCCCCHHHHHHHHHHHH
Q 010250          433 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---------------DNIMMSPPFIMSPEEVDELISKYG  497 (514)
Q Consensus       433 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---------------~~iRi~p~~~~t~e~id~~~~~l~  497 (514)
                      ++++.+.....          ....+...|.++||.+.++.               +.|||+++.  ++++|++++++|.
T Consensus       367 ~~~~~~~~~~~----------~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~--~~e~i~~~l~~l~  434 (444)
T 3if2_A          367 FLWLWFKDLPI----------STLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAA--DEQTLIDGIKVIG  434 (444)
T ss_dssp             EEEEEETTCSS----------CHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSS--CHHHHHHHHHHHH
T ss_pred             EEEEEcCCCCC----------CHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEeC--CHHHHHHHHHHHH
Confidence            88888864211          14567888999999998641               369999875  9999999999999


Q ss_pred             HHHHHHH
Q 010250          498 KALKATE  504 (514)
Q Consensus       498 ~~l~~~~  504 (514)
                      ++++++.
T Consensus       435 ~~~~~~~  441 (444)
T 3if2_A          435 EVVRELY  441 (444)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9987654

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.90  E-value=8.4e-23  Score=210.26  Aligned_cols=327  Identities=13%  Similarity=0.067  Sum_probs=213.4

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV  179 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al  179 (514)
                      +.||||.++...  ++   |++++++.++++...+.      +.+...++++.++++++   .+++++++||++|++.++
T Consensus        30 ~~~id~~~~~~~--~~---~~v~~a~~~~~~~~~y~------~~~~~~~l~~~la~~~~---~~~~v~~~~Gt~a~~~~l   95 (399)
T 2oga_A           30 VPFLDLKAAYEE--LR---AETDAAIARVLDSGRYL------LGPELEGFEAEFAAYCE---TDHAVGVNSGMDALQLAL   95 (399)
T ss_dssp             BCSCCHHHHHHH--TH---HHHHHHHHHHHHHTCCS------SSHHHHHHHHHHHHHTT---SSEEEEESCHHHHHHHHH
T ss_pred             CcccccCcCCCC--CC---HHHHHHHHHHHhcCCCC------CchhHHHHHHHHHHHHC---CCeEEEecCHHHHHHHHH
Confidence            568999877543  33   99999999998753211      23566889999999973   347899999999999999


Q ss_pred             HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhHHHHHHHH
Q 010250          180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLAN  258 (514)
Q Consensus       180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  258 (514)
                      +.+.      . .++++|++.+++|++.... +...|....            .++... .+.             .+++
T Consensus        96 ~~~~------~-~~gd~vl~~~~~~~~~~~~-~~~~g~~~~------------~~~~~~~~~~-------------~d~~  142 (399)
T 2oga_A           96 RGLG------I-GPGDEVIVPSHTYIASWLA-VSATGATPV------------PVEPHEDHPT-------------LDPL  142 (399)
T ss_dssp             HHTT------C-CTTCEEEEESSSCTHHHHH-HHHTTCEEE------------EECBCSSSSS-------------BCHH
T ss_pred             HHhC------C-CCcCEEEECCCccHHHHHH-HHHCCCEEE------------EEecCCCCCC-------------cCHH
Confidence            8762      1 3346899999999985432 222222111            111110 011             1146


Q ss_pred             HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhch
Q 010250          259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF  338 (514)
Q Consensus       259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~  338 (514)
                      +|++.+.    +++++|+++   +.+|.+.+    +++|.++|++||+++|+||+|+ +|.....   ..++..+|++++
T Consensus       143 ~l~~~i~----~~~~~v~~~---n~tG~~~~----l~~i~~l~~~~~~~li~Dea~~-~g~~~~~---~~~~~~~di~~~  207 (399)
T 2oga_A          143 LVEKAIT----PRTRALLPV---HLYGHPAD----MDALRELADRHGLHIVEDAAQA-HGARYRG---RRIGAGSSVAAF  207 (399)
T ss_dssp             HHHHHCC----TTEEEECCB---CGGGCCCC----HHHHHHHHHHHTCEECEECTTC-TTCEETT---EETTCTTCEEEE
T ss_pred             HHHHhcC----CCCeEEEEe---CCcCCccC----HHHHHHHHHHcCCEEEEECccc-ccCccCC---eecccccCEEEE
Confidence            7776664    356777743   34576665    9999999999999999999997 3322111   123333688877


Q ss_pred             ----hhhhcCCcccceeEEeC-HHHHHHhhhccCCC--Ccc---cccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHH
Q 010250          339 ----AKALSSAYMPIGAILVS-PEVSEVIHSQSNTL--GSF---SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIA  408 (514)
Q Consensus       339 ----sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~--~~~---~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~  408 (514)
                          +|.+++.+ ++|+++++ +++++.+......-  ..+   ..+.++..++++++++.++++.++  .+.++.+++.
T Consensus       208 S~~~sK~~~~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~--~~~~~~~~~~  284 (399)
T 2oga_A          208 SFYPGKNLGCFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLD--SWNGRRSALA  284 (399)
T ss_dssp             ECCTTSSSCCSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHH
T ss_pred             eCCCCccCCcCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence                49998733 78888886 88877765321000  001   113345668999999988888664  3567777888


Q ss_pred             HHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--------------
Q 010250          409 PKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--------------  473 (514)
Q Consensus       409 ~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--------------  473 (514)
                      +++++.|+++....+.... .+.+.++.+.+...            ....+.+.|.++||.+++..              
T Consensus       285 ~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~  352 (399)
T 2oga_A          285 AEYLSGLAGLPGIGLPVTAPDTDPVWHLFTVRTE------------RRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEA  352 (399)
T ss_dssp             HHHHHHTTTCTTCBCCCCCTTEECCCSSEEEECS------------SHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTS
T ss_pred             HHHHHHhccCCCccccCCCCCCcceeEEEEEECC------------CHHHHHHHHHHCCCceecCCCCccccchhhcccC
Confidence            8888888775322111100 12222222333211            14568889999999987532              


Q ss_pred             --------------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          474 --------------DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       474 --------------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                                    +.|||+++..+|++|+++++++|+++++++
T Consensus       353 ~~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l  396 (399)
T 2oga_A          353 PPEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAERV  396 (399)
T ss_dssp             CCTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHh
Confidence                          359999999999999999999999988654

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=99.90  E-value=9.1e-23  Score=205.38  Aligned_cols=320  Identities=15%  Similarity=0.103  Sum_probs=212.6

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC-CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCcc
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS-KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK  195 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~-~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~  195 (514)
                      .+|+|++|+.+++..  +.   +....+...++.+.++++++.. +.+++++++||++|++.+++.+.         + +
T Consensus        11 ~~~~v~~a~~~~~~~--~~---~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~---------~-d   75 (353)
T 2yrr_A           11 IPERVQKALLRPMRG--HL---DPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLD---------R-G   75 (353)
T ss_dssp             CCHHHHGGGGSCCCC--TT---CHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCS---------C-C
T ss_pred             CCHHHHHHHhccccc--cc---CHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhc---------C-C
Confidence            579999998877654  11   1112345678999999988532 35789999999999999998663         2 6


Q ss_pred             EEEEEecCCccccee-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEE
Q 010250          196 KFIARQKSYHGSTLI-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAA  274 (514)
Q Consensus       196 ~ii~~~~~yHG~t~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aa  274 (514)
                      +|++.+++||+.... .....|...            ..++.+..+.             .++++|++.+.+.   ++++
T Consensus        76 ~vl~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~-------------~d~~~l~~~l~~~---~~~~  127 (353)
T 2yrr_A           76 PVLVLVNGAFSQRVAEMAALHGLDP------------EVLDFPPGEP-------------VDPEAVARALKRR---RYRM  127 (353)
T ss_dssp             CEEEEECSHHHHHHHHHHHHTTCCE------------EEEECCTTSC-------------CCHHHHHHHHHHS---CCSE
T ss_pred             cEEEEcCCCchHHHHHHHHHcCCce------------EEEeCCCCCC-------------CCHHHHHHHHHhC---CCCE
Confidence            799999999985211 111112111            1111111110             1157788877642   4567


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccceeE
Q 010250          275 FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAI  352 (514)
Q Consensus       275 vivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v  352 (514)
                      |+++++++++|.+.+    +++|.++|++||+++|+||+|+ +|...  .....+  .+|+++  ++|+++|+ .++|++
T Consensus       128 v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~D~a~~-~~~~~--~~~~~~--~~d~~~~s~~K~~~~~-~g~G~~  197 (353)
T 2yrr_A          128 VALVHGETSTGVLNP----AEAIGALAKEAGALFFLDAVTT-LGMLP--FSMRAM--GVDYAFTGSQKCLSAP-PGLAPI  197 (353)
T ss_dssp             EEEESEETTTTEECC----HHHHHHHHHHHTCEEEEECTTT-TTTSC--CCHHHH--TCSEEECCTTSTTCCC-SSCEEE
T ss_pred             EEEEccCCCcceecC----HHHHHHHHHHcCCeEEEEcCcc-ccccc--cccccc--CceEEEecCcccccCC-CceEEE
Confidence            888889999998877    8999999999999999999994 76542  222223  357765  46988875 468999


Q ss_pred             EeCHHHHHHhhh-ccCCC------Ccc-cccCCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhccCC
Q 010250          353 LVSPEVSEVIHS-QSNTL------GSF-SHGFTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFSDS  421 (514)
Q Consensus       353 ~~~~~i~~~l~~-~~~~~------~~~-~~~~t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~  421 (514)
                      ++++++++.+.. .....      +.. .....++.++.+++++.++++.+.+.   ++.++++++++++.+.|+++ +.
T Consensus       198 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~  276 (353)
T 2yrr_A          198 AASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GF  276 (353)
T ss_dssp             EECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred             EECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence            999998877641 00000      000 01123345677777778888877543   46788888999999999875 32


Q ss_pred             CceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCHHHHH-HHHHH
Q 010250          422 PIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSPEEVD-ELISK  495 (514)
Q Consensus       422 ~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~e~id-~~~~~  495 (514)
                      .........+.++.+.+.+..           ....+.+.|.++||.+.++     .+.+|++++...+++|++ +++++
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~  345 (353)
T 2yrr_A          277 RPYPKASPLPTVLVVRPPEGV-----------DADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKA  345 (353)
T ss_dssp             EESCSSSBCTTEEEEECCTTC-----------CHHHHHHHHHHTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHH
T ss_pred             ccccCccCCCeEEEEECCCCC-----------CHHHHHHHHHHCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHH
Confidence            222111113445566663211           1456888999999999864     257999987788999999 99999


Q ss_pred             HHHHHH
Q 010250          496 YGKALK  501 (514)
Q Consensus       496 l~~~l~  501 (514)
                      |+++++
T Consensus       346 l~~~l~  351 (353)
T 2yrr_A          346 LDRALA  351 (353)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            998875

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=99.90  E-value=4.5e-22  Score=202.36  Aligned_cols=339  Identities=14%  Similarity=0.132  Sum_probs=215.1

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccc----cccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYH----SFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND  176 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~----~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~  176 (514)
                      .|||+.++      +..+|.+++++.+++.+.....    .......+...+++++++++++. +.+++++++||++|++
T Consensus         2 iyld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~i~~~~g~~~a~~   74 (382)
T 4hvk_A            2 AYFDYTSA------KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNG-GGGTVVFTSGATEANN   74 (382)
T ss_dssp             CBCBTTTC------CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTC-TTEEEEEESSHHHHHH
T ss_pred             EeecCCCc------CCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCC-CcCeEEEECCchHHHH
Confidence            37787554      3578999999999987632211    10011234556888999998743 4578999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec--CCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL--SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      .+++.+..+..    .+++.||+.++.|++.......+  .|...            ..++....+.             
T Consensus        75 ~~~~~~~~~~~----~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~-------------  125 (382)
T 4hvk_A           75 LAIIGYAMRNA----RKGKHILVSAVEHMSVINPAKFLQKQGFEV------------EYIPVGKYGE-------------  125 (382)
T ss_dssp             HHHHHHHHHHG----GGCCEEEEETTCCHHHHHHHHHHHHTTCEE------------EEECBCTTSC-------------
T ss_pred             HHHHHhhhhhc----CCCCEEEECCCCcHHHHHHHHHHHhcCCEE------------EEeccCCCCC-------------
Confidence            99997643211    12467888888887654322111  12111            1111111110             


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCc
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD  334 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pD  334 (514)
                      .++++|++.+.    +++++|+++++++++|.+.+    +++|.++|++||+ +|+||+|+ +|..  .+....++  +|
T Consensus       126 ~d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~-li~D~a~~-~~~~--~~~~~~~~--~d  191 (382)
T 4hvk_A          126 VDVSFIDQKLR----DDTILVSVQHANNEIGTIQP----VEEISEVLAGKAA-LHIDATAS-VGQI--EVDVEKIG--AD  191 (382)
T ss_dssp             BCHHHHHHHCC----TTEEEEECCSBCTTTCBBCC----HHHHHHHHSSSSE-EEEECTTT-BTTB--CCCHHHHT--CS
T ss_pred             cCHHHHHHHhc----cCceEEEEECCCCCceeeCC----HHHHHHHHHHcCE-EEEEhHHh-cCCC--CCCchhcC--CC
Confidence            11467777664    46789999999999998877    9999999999999 99999997 4322  12222223  57


Q ss_pred             hhc--hhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHH
Q 010250          335 LVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPK  410 (514)
Q Consensus       335 iv~--~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~  410 (514)
                      +++  ++|.++ + .++|+++++++.  .+.+................++.++++..++++.+.+  +++.++.+++.++
T Consensus       192 ~~~~s~~K~~g-~-~g~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~  267 (382)
T 4hvk_A          192 MLTISSNDIYG-P-KGVGALWIRKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDR  267 (382)
T ss_dssp             EEEEESGGGTS-C-TTCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeHHHhcC-C-CceEEEEEcCcc--CcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            664  569543 2 458888887764  2221000000000111334567778877788876554  4567888888999


Q ss_pred             HHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----------------
Q 010250          411 FQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----------------  472 (514)
Q Consensus       411 l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----------------  472 (514)
                      +.+.|+++....+.... ...+.++.+.+....            ...+.+.|.++||.+.++                 
T Consensus       268 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~  335 (382)
T 4hvk_A          268 IIDNVLKIEESYLNGHPEKRLPNNVNVRFSYIE------------GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMAC  335 (382)
T ss_dssp             HHHHHTTSTTEEECSCSSSBCTTEEEEEETTCC------------HHHHHHHHHHTTCBCBCC--------CCCHHHHHT
T ss_pred             HHHHHhcCCCeEEeCCccccCCCEEEEEECCCC------------HHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHc
Confidence            99988765221111100 111235555553211            456788999999998864                 


Q ss_pred             -------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          473 -------GDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       473 -------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                             .+.||+++...+|++|+++++++|+++++++.+
T Consensus       336 g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~  375 (382)
T 4hvk_A          336 GLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS  375 (382)
T ss_dssp             TCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence                   367999999889999999999999999877653

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=99.89  E-value=6.8e-23  Score=212.40  Aligned_cols=342  Identities=11%  Similarity=0.029  Sum_probs=214.0

Q ss_pred             CCEEEEccCCcccccCCCCC--HHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcCcC-----CCC--eEEEe
Q 010250           99 GKKYLDSLAGLWCTALGGSE--PRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFTAS-----KMA--KVFFT  168 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~--p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~~~-----~~~--~v~~~  168 (514)
                      +..+|||..|.+..+.|+.+  |.|.+|+.++++... +.+.    +.....++.+.+++++...     ..+  +++++
T Consensus        48 ~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~----~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t  123 (420)
T 4f4e_A           48 RPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYL----PIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQA  123 (420)
T ss_dssp             CSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCC----CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEE
T ss_pred             CCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCC----CCCCcHHHHHHHHHHhcCCCccccccCceEEEEC
Confidence            44689999997777788766  899999999987621 1111    1122345555555554211     245  89999


Q ss_pred             CChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCCC
Q 010250          169 NSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHPG  246 (514)
Q Consensus       169 ~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  246 (514)
                      +||++|++.++++....      .++++|++.+++|++........+....             .+++  +..+.     
T Consensus       124 ~G~t~al~~~~~~~~~~------~~gd~Vlv~~p~~~~~~~~~~~~g~~~~-------------~v~~~~~~~~~-----  179 (420)
T 4f4e_A          124 LGGTGALKIGADFLRTL------NPKAKVAISDPSWENHRALFDMAGFEVV-------------AYPYYDAKTNG-----  179 (420)
T ss_dssp             EHHHHHHHHHHHHHHHH------CTTCCEEEEESCCHHHHHHHHHTTCCEE-------------EEECEETTTTE-----
T ss_pred             CccHHHHHHHHHHHHHh------CCCCEEEEeCCCcHhHHHHHHHcCCeEE-------------EeeeeccccCc-----
Confidence            99999999998765322      3456899999999987544433322211             1111  00000     


Q ss_pred             CChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--cc
Q 010250          247 ETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MF  324 (514)
Q Consensus       247 ~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--~~  324 (514)
                              .++++|++.+.+. ++++.+++++..++++|.+. +.+.+++|.++|++||+++|+||+|.+|+..+.  ..
T Consensus       180 --------~d~~~l~~~l~~~-~~~~~~v~i~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~  249 (420)
T 4f4e_A          180 --------VNFDGMLAALNGY-EPGTIVVLHACCHNPTGVDL-NDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAA  249 (420)
T ss_dssp             --------ECHHHHHHHHTTC-CTTCEEEEECSSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGH
T ss_pred             --------cCHHHHHHHHHhC-CCCCEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhH
Confidence                    0157788877643 24567888888888888654 668899999999999999999999999876542  11


Q ss_pred             eec-ccCCCCchh---chhhhhcCCcccceeEEe---CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH--
Q 010250          325 GCD-KYSIKPDLV---SFAKALSSAYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY--  395 (514)
Q Consensus       325 ~~~-~~gv~pDiv---~~sK~l~gG~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~--  395 (514)
                      ... ..+..++++   +|||.++..++++|++++   ++++++.+....   .......+.+.+++++.++.++++..  
T Consensus       250 ~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~l  326 (420)
T 4f4e_A          250 AVRLFAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQL---KRVIRTNYSNPPTHGGAIVAAVLASPEL  326 (420)
T ss_dssp             HHHHHHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHH---HHHHHTTTSSCCSHHHHHHHHHHHCHHH
T ss_pred             HHHHHHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHH---HHHHhcccCCCCHHHHHHHHHHhcCHHH
Confidence            211 112223322   689998842389999864   566655432110   01111233445666766666656431  


Q ss_pred             ----h--hccHHHHHHHHHHHHHhhhhhccC-CCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcE
Q 010250          396 ----K--ERNIVEQVNKIAPKFQDGVKAFSD-SPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGML  468 (514)
Q Consensus       396 ----~--~~~~~~~~~~~~~~l~~~L~~l~~-~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~  468 (514)
                          +  -+++.++++++++++.+.|+++.. ..+.......|.+.++.+.               ...+...+.++||+
T Consensus       327 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~---------------~~~~~~~l~~~gI~  391 (420)
T 4f4e_A          327 RASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLT---------------SAQVDRLREEFGIY  391 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCC---------------HHHHHHHHHHHCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCC---------------HHHHHHHHHhCCEE
Confidence                1  135677888889999999987621 1111111223444433331               23466777889999


Q ss_pred             EEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          469 VRVSGDNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       469 ~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      +.+.+   |+++. .+++++|++++++|++++
T Consensus       392 v~~~~---Ris~~-~~~~~~i~~~~~~l~~~l  419 (420)
T 4f4e_A          392 AVSTG---RICVA-ALNTRNLDVVANAIAAVL  419 (420)
T ss_dssp             CCTTS---EEEGG-GCCTTTHHHHHHHHHHHH
T ss_pred             ecCCC---eEEEe-cCCHHHHHHHHHHHHHHh
Confidence            98764   88864 458888999999999876

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.89  E-value=1.9e-22  Score=203.25  Aligned_cols=318  Identities=13%  Similarity=0.042  Sum_probs=210.8

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccE
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK  196 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~  196 (514)
                      .+|+|++|+.+++... .+    ....+...++.++++++++. +.+.+++++||++|++.+++.++        .++++
T Consensus        12 ~~~~v~~a~~~~~~~~-~~----~~~~~~~~~l~~~la~~~g~-~~~~i~~~~g~t~a~~~~~~~~~--------~~gd~   77 (352)
T 1iug_A           12 LHPKALEALARPQLHH-RT----EAAREVFLKARGLLREAFRT-EGEVLILTGSGTLAMEALVKNLF--------APGER   77 (352)
T ss_dssp             CCHHHHHHHHSCCCCT-TS----HHHHHHHHHHHHHHHHHHTC-SSEEEEEESCHHHHHHHHHHHHC--------CTTCE
T ss_pred             CCHHHHHHhccCCCCc-cC----HHHHHHHHHHHHHHHHHhCC-CCceEEEcCchHHHHHHHHHhcc--------CCCCe
Confidence            5799999998876521 11    11234457899999998853 34689999999999999998873        23468


Q ss_pred             EEEEecCCcccceeee-ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250          197 FIARQKSYHGSTLIAA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF  275 (514)
Q Consensus       197 ii~~~~~yHG~t~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav  275 (514)
                      |++.+++|++...... ...|...            ..++.+..+..+             .+++++       +++++|
T Consensus        78 vl~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~~d-------------~~~l~~-------~~~~~v  125 (352)
T 1iug_A           78 VLVPVYGKFSERFYEIALEAGLVV------------ERLDYPYGDTPR-------------PEDVAK-------EGYAGL  125 (352)
T ss_dssp             EEEEECSHHHHHHHHHHHHTTCEE------------EEEECCTTCCCC-------------TTTSCC-------SSCSEE
T ss_pred             EEEEeCCchhHHHHHHHHHcCCce------------EEEeCCCCCCCC-------------HHHHhc-------cCCcEE
Confidence            9999999998641111 1112111            111111111000             123322       245678


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHhc--CCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCccccee
Q 010250          276 IAEPVIGAGGVIPPPATYFEKVQAVVKKY--DILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGA  351 (514)
Q Consensus       276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~--gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~  351 (514)
                      +++.+++.+|.+.+    +++|.++|++|  |+++|+||+|+ +|...  +....+  .+|+++  ++|++.|+ .++|+
T Consensus       126 ~~~~~~nptG~~~~----l~~i~~l~~~~~~~~~li~D~a~~-~~~~~--~~~~~~--~~d~~~~s~~K~~~~~-~g~G~  195 (352)
T 1iug_A          126 LLVHSETSTGALAD----LPALARAFKEKNPEGLVGADMVTS-LLVGE--VALEAM--GVDAAASGSQKGLMCP-PGLGF  195 (352)
T ss_dssp             EEESEETTTTEECC----HHHHHHHHHHHCTTCEEEEECTTT-BTTBC--CCSGGG--TCSEEEEESSSTTCCC-SCEEE
T ss_pred             EEEEecCCcceecC----HHHHHHHHHhhCCCCEEEEECCcc-ccCcc--eecccc--CeeEEEecCcccccCC-CceeE
Confidence            88888999998877    99999999999  99999999996 54431  222222  367775  56988875 46899


Q ss_pred             EEeCHHHHHHhhhccCCC------Ccc-cccCCCCCcHHHHHHHHHHHHHHhhc--cHHHHHHHHHHHHHhhhhhccCCC
Q 010250          352 ILVSPEVSEVIHSQSNTL------GSF-SHGFTYSGHPVSCAVAIEALKIYKER--NIVEQVNKIAPKFQDGVKAFSDSP  422 (514)
Q Consensus       352 v~~~~~i~~~l~~~~~~~------~~~-~~~~t~~~~pl~~aaa~aal~~~~~~--~~~~~~~~~~~~l~~~L~~l~~~~  422 (514)
                      +++++++++.+.......      ... ....+++.++.+++++.++++.+++.  ++.++++++++++.+.|+++ +..
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~  274 (352)
T 1iug_A          196 VALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEG-GLR  274 (352)
T ss_dssp             EEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred             EEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCc
Confidence            999998776521100000      000 01123456778888888888877653  56778888899999999875 322


Q ss_pred             ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCHHHHHHHHHHHH
Q 010250          423 IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSPEEVDELISKYG  497 (514)
Q Consensus       423 ~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~e~id~~~~~l~  497 (514)
                      +.... ..+.++.+.+.+..           ....+.+.|.++||.+.++     .+.+||+++...|++|+++++++|+
T Consensus       275 ~~~~~-~~~~~~~~~~~~~~-----------~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~  342 (352)
T 1iug_A          275 PVPKR-FSPAVAAFYLPEGV-----------PYARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFR  342 (352)
T ss_dssp             ESCSS-BCTTCEEEECCTTC-----------CHHHHHHHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHH
T ss_pred             ccccc-cCCeEEEEEcCCCC-----------CHHHHHHHHHHCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHH
Confidence            21111 24667777764211           1456888999999999875     3679999988889999999999999


Q ss_pred             HHHHHH
Q 010250          498 KALKAT  503 (514)
Q Consensus       498 ~~l~~~  503 (514)
                      ++++++
T Consensus       343 ~~~~~~  348 (352)
T 1iug_A          343 EVLEEI  348 (352)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            988654

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=99.89  E-value=2.9e-22  Score=206.77  Aligned_cols=331  Identities=15%  Similarity=0.098  Sum_probs=214.9

Q ss_pred             cCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEE-EeCChhHHHHHHHHHHHHHHhhcCC
Q 010250          113 ALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVF-FTNSGSEANDTQVKLVWYYNNALGR  191 (514)
Q Consensus       113 ~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~-~~~sGseA~~~Alk~a~~~~~~~~~  191 (514)
                      +|+++++.+.+++.+++.+....+.. ....+...+++++++++++. ..+.++ +++||++|++.+++.+.        
T Consensus        14 ~~~p~p~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~l~~~la~~~g~-~~~~~~~~~~s~t~al~~~~~~l~--------   83 (416)
T 3isl_A           14 IMTPGPVEVDPRVLRVMSTPVVGQFD-PAFTGIMNETMEMLRELFQT-KNRWAYPIDGTSRAGIEAVLASVI--------   83 (416)
T ss_dssp             ECSSSSCCCCHHHHHHTTSCCCCTTS-HHHHHHHHHHHHHHHHHTTC-CCSEEEEEESCHHHHHHHHHHHHC--------
T ss_pred             eecCCCcCcCHHHHHHhcccCCCCcc-HHHHHHHHHHHHHHHHHhCC-CCCcEEEecCcHHHHHHHHHHHhc--------
Confidence            46666666666666666543221110 11234567889999998853 345554 89999999999998763        


Q ss_pred             CCccEEEEEecCCccccee-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCC
Q 010250          192 PNKKKFIARQKSYHGSTLI-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPE  270 (514)
Q Consensus       192 ~~~~~ii~~~~~yHG~t~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~  270 (514)
                      .++++||+.+++||+.... .....|...            ..++.+..+.             .++++|++.+.+.   
T Consensus        84 ~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~-------------~d~~~l~~~i~~~---  135 (416)
T 3isl_A           84 EPEDDVLIPIYGRFGYLLTEIAERYGANV------------HMLECEWGTV-------------FDPEDIIREIKKV---  135 (416)
T ss_dssp             CTTCEEEEEESSHHHHHHHHHHHHTTCEE------------EEEECCTTCC-------------CCHHHHHHHHHHH---
T ss_pred             CCCCEEEEecCCcccHHHHHHHHhcCCee------------EEEecCCCCC-------------CCHHHHHHHHhhC---
Confidence            3467899999999983321 122222211            1111111100             1257888887642   


Q ss_pred             cEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCccc
Q 010250          271 TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMP  348 (514)
Q Consensus       271 ~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~p  348 (514)
                      ++++|+++.+++.+|.+.+    +++|.++|++||+++|+||+|+ +|..  ......  ..+|+++  ++|++.|+ .+
T Consensus       136 ~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~~~~--~~~~~~--~~~d~~~~s~~K~l~g~-~g  205 (416)
T 3isl_A          136 KPKIVAMVHGETSTGRIHP----LKAIGEACRTEDALFIVDAVAT-IGGC--EVKVDE--WKIDAAIGGTQKCLSVP-SG  205 (416)
T ss_dssp             CCSEEEEESEETTTTEECC----CHHHHHHHHHTTCEEEEECTTT-TTTS--CCCTTT--TTCSEEECCSSSTTCCC-SS
T ss_pred             CCcEEEEEccCCCCceecC----HHHHHHHHHHcCCEEEEECCcc-ccCC--Ccchhh--cCCCEEEecCccccCCC-CC
Confidence            3578888899999998887    8999999999999999999997 4322  112222  2367765  45988876 68


Q ss_pred             ceeEEeCHHHHHHhhhcc------------------CCCCc------------ccccC-CCCCcHHHHHHHHHHHHHHhh
Q 010250          349 IGAILVSPEVSEVIHSQS------------------NTLGS------------FSHGF-TYSGHPVSCAVAIEALKIYKE  397 (514)
Q Consensus       349 ig~v~~~~~i~~~l~~~~------------------~~~~~------------~~~~~-t~~~~pl~~aaa~aal~~~~~  397 (514)
                      +|++++++++++.+....                  .....            ..... ..+.+..+++++.++++.+.+
T Consensus       206 ~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~  285 (416)
T 3isl_A          206 MAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLE  285 (416)
T ss_dssp             EEEEEECHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred             eEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence            999999999988876321                  00000            01111 224467777777788887665


Q ss_pred             c---cHHHHHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee
Q 010250          398 R---NIVEQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS  472 (514)
Q Consensus       398 ~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~  472 (514)
                      .   ++.++++++++++.+.|+++ ...+.... ...+.++.+.+.+..           ....+.+.|.++ ||.+.++
T Consensus       286 ~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~L~~~~gi~v~~g  353 (416)
T 3isl_A          286 EGLETRFERHRHHEAALAAGIKAM-GLRLFGDDSCKMPVVTCVEIPGGI-----------DGESVRDMLLAQFGIEIASS  353 (416)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCTTEEEEECCTTC-----------CHHHHHHHHHHHHCEECBCC
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCccccCCcEEEEeCCCCC-----------CHHHHHHHHHHhCCEEEecC
Confidence            3   57888899999999999875 33222111 112456667664321           145688888887 9999853


Q ss_pred             -----CCEEEEeCCCCCCHHH-HHHHHHHHHHHHHHH
Q 010250          473 -----GDNIMMSPPFIMSPEE-VDELISKYGKALKAT  503 (514)
Q Consensus       473 -----g~~iRi~p~~~~t~e~-id~~~~~l~~~l~~~  503 (514)
                           ++.+|++++...+++| |++++++|+++++++
T Consensus       354 ~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~  390 (416)
T 3isl_A          354 FGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRH  390 (416)
T ss_dssp             CSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHc
Confidence                 3579999866666666 999999999998765

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=99.89  E-value=8.4e-22  Score=197.49  Aligned_cols=314  Identities=14%  Similarity=0.139  Sum_probs=211.6

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT  177 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~  177 (514)
                      +.+++|||.++.  +++| .+|.+.+++.++++....|      +.....++.+.++++++ ...+++++++|+++++..
T Consensus        14 ~~~~~i~l~~n~--~~~~-~~~~v~~a~~~~~~~~~~y------~~~~~~~lr~~la~~~~-~~~~~i~~t~G~~~~l~~   83 (337)
T 3p1t_A           14 AAAQAVCLAFNE--NPEA-VEPRVQAAIAAAAARINRY------PFDAEPRVMRKLAEHFS-CPEDNLMLVRGIDECFDR   83 (337)
T ss_dssp             CCCCCEECSSCC--CCSC-CCHHHHHHHHHHGGGTTSC------CTTHHHHHHHHHHHHHT-SCGGGEEEESHHHHHHHH
T ss_pred             CCCCceEeeCCC--CCCC-CCHHHHHHHHHhhhhhccC------CCCchHHHHHHHHHHhC-cCHHHEEEeCCHHHHHHH
Confidence            456799998875  5677 6899999999988764332      34566889999999984 345789999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      +++.+          ++++|++.+++|++....... .|...            ..++....|.             .+.
T Consensus        84 ~~~~~----------~gd~vl~~~p~~~~~~~~~~~-~g~~~------------~~v~~~~~~~-------------~d~  127 (337)
T 3p1t_A           84 ISAEF----------SSMRFVTAWPGFDGYRARIAV-SGLRH------------FEIGLTDDLL-------------LDP  127 (337)
T ss_dssp             HHHHS----------TTSEEEEESSSCSHHHHHHTT-SCCEE------------EEECBCTTSS-------------BCH
T ss_pred             HHHhc----------CCCeEEEeCCCcHHHHHHHHH-cCCEE------------EEecCCCCCC-------------CCH
Confidence            98764          246899999999886533222 12111            1111111111             013


Q ss_pred             HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc
Q 010250          258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS  337 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~  337 (514)
                      +++++.     . ++.++++...++++|.+.+    ++++.++|+++++ +|+||+|.+|+..+... ....+....+.+
T Consensus       128 ~~l~~~-----~-~~~~v~i~~p~nptG~~~~----~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~-~~~~~~~i~~~S  195 (337)
T 3p1t_A          128 NDLAQV-----S-RDDCVVLANPSNPTGQALS----AGELDQLRQRAGK-LLIDETYVDYSSFRARG-LAYGENELVFRS  195 (337)
T ss_dssp             HHHTTC-----C-TTEEEEEESSCTTTCCCCC----HHHHHHHHHHCSE-EEEECTTGGGSSCSSSC-CCCBTTEEEEEE
T ss_pred             HHHHhh-----c-CCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCc-EEEECCChhhccccccc-cccCCCEEEEee
Confidence            444432     2 3356666666778888887    7899999999997 56699999876544321 111111112336


Q ss_pred             hhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhhh
Q 010250          338 FAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDGV  415 (514)
Q Consensus       338 ~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~L  415 (514)
                      +||.++ .| +++|++++++++++.+...         ..+++.++++++++.++|+... -++..+++.++.+++.+.|
T Consensus       196 ~sK~~g~~G-~r~G~~~~~~~~~~~l~~~---------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L  265 (337)
T 3p1t_A          196 FSKSYGLAG-LRLGALFGPSELIAAMKRK---------QWFCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADAL  265 (337)
T ss_dssp             SSSTTCCTT-TCCEEEECCHHHHHHHHTT---------SCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CchhccCcc-hheEEEEeCHHHHHHHHhh---------cCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            889997 45 8999999999999988731         2356678888888888776432 1344566677778888888


Q ss_pred             hhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-----CEEEEeCCCCCCHHHHH
Q 010250          416 KAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-----DNIMMSPPFIMSPEEVD  490 (514)
Q Consensus       416 ~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-----~~iRi~p~~~~t~e~id  490 (514)
                      +++ ....   ....|.++.+.+.+              ...+.+.|.++||.+.++.     +.+|++.   .++++++
T Consensus       266 ~~~-g~~~---~~~~~~~~~~~~~~--------------~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~---~~~~~~~  324 (337)
T 3p1t_A          266 RGL-GYRV---ASSEANFVLVENAA--------------GERTLRFLRERGIQVKDAGQFGLHHHIRISI---GREEDND  324 (337)
T ss_dssp             HHT-TCCB---CCCSSSEEEEECTT--------------THHHHHHHHHTTEECEEGGGGTCCSEEEEEC---CCHHHHH
T ss_pred             HHC-cCEE---CCCCCeEEEEEcCC--------------HHHHHHHHHHCCeEEEECccCCCCCeEEEec---CCHHHHH
Confidence            775 2222   23456666665432              1246678889999998753     6799994   3899999


Q ss_pred             HHHHHHHHHH
Q 010250          491 ELISKYGKAL  500 (514)
Q Consensus       491 ~~~~~l~~~l  500 (514)
                      +++++|++.+
T Consensus       325 ~l~~al~~~~  334 (337)
T 3p1t_A          325 RLLAALAEYS  334 (337)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHh
Confidence            9999988765

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.89  E-value=2.9e-22  Score=206.06  Aligned_cols=331  Identities=14%  Similarity=0.104  Sum_probs=209.7

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHh-cCCccc---cccccCCchHHHHH----HHHHHhcCcCCCCeEEEeCCh
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLN-TLPFYH---SFWNRTTKPSLDLA----KELLEMFTASKMAKVFFTNSG  171 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~-~~~~~~---~~~~~~~~~~~ela----~~L~~~~~~~~~~~v~~~~sG  171 (514)
                      +.++|+.++   +++   +|+|++|+.+++. .....+   .++.+ .....+++    ++++++++. + ...++++||
T Consensus        24 ~~~~~~~~~---~~~---~~~v~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~r~~la~~~g~-~-~~~i~~~sG   94 (405)
T 2vi8_A           24 AKIELIASE---NFV---SRAVMEAQGSVLTNKYAEGYPGRRYYGG-CEYVDIVEELARERAKQLFGA-E-HANVQPHSG   94 (405)
T ss_dssp             HSEECCTTC---CCC---CHHHHHHHTSGGGGCCCCEETTEESSSC-CHHHHHHHHHHHHHHHHHHTC-S-EEECCCSSH
T ss_pred             cceeeccCc---ccC---CHHHHHHHHHHhhcccccCCCCcccccc-chHHHHHHHHHHHHHHHHhCC-C-ceEEEecCc
Confidence            457887655   444   8999999999985 432211   11111 12234444    588888742 2 234556888


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccce-ee-eecCCCccccCCCCCCCCcccccCC-CCcccCCCCCCC
Q 010250          172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL-IA-ASLSGLPALHQKFDLPAPFVLHTDC-PHYWRYAHPGET  248 (514)
Q Consensus       172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~-~~-~~~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  248 (514)
                      ++|++.+++.++        .++++|++.+++|++... .. ....|..     .     .+..++. +..+.       
T Consensus        95 t~a~~~a~~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~-----~-----~~~~~~~~~~~~~-------  149 (405)
T 2vi8_A           95 AQANMAVYFTVL--------EHGDTVLGMNLSHGGHLTHGSPVNFSGVQ-----Y-----NFVAYGVDPETHV-------  149 (405)
T ss_dssp             HHHHHHHHHHHC--------CTTCEEEEECGGGTCCTTTTCTTSHHHHH-----S-----EEEEECBCTTTCS-------
T ss_pred             HHHHHHHHHHhc--------CCCCEEEEecccccchhcccchhhhccce-----e-----EEEecccccccCC-------
Confidence            999999999873        335678888877654421 11 1111110     0     0000110 00111       


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecc
Q 010250          249 EEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK  328 (514)
Q Consensus       249 ~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~  328 (514)
                            .++++|++.+.+.   ++++|++.|.+  .|...    .+++|+++|++||+++|+||+|+ +|+.+...  ..
T Consensus       150 ------~d~~~l~~~i~~~---~~~~v~~~~~~--~~~~~----~l~~i~~l~~~~~~~li~Dea~~-~g~~~~~~--~~  211 (405)
T 2vi8_A          150 ------IDYDDVREKARLH---RPKLIVAAAAA--YPRII----DFAKFREIADEVGAYLMVDMAHI-AGLVAAGL--HP  211 (405)
T ss_dssp             ------BCHHHHHHHHHHH---CCSEEEECCSS--CCSCC----CHHHHHHHHHHHTCEEEEECTTT-HHHHHTTS--SC
T ss_pred             ------cCHHHHHHHHHhc---CCeEEEEeCCC--CCccC----CHHHHHHHHHHcCCEEEEEcccc-ccccccCc--CC
Confidence                  1257788877642   24566665432  23222    28999999999999999999998 66554321  11


Q ss_pred             cCC-CCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCC-cHHHHHHHHHHHHHHhh---ccHH
Q 010250          329 YSI-KPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG-HPVSCAVAIEALKIYKE---RNIV  401 (514)
Q Consensus       329 ~gv-~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~-~pl~~aaa~aal~~~~~---~~~~  401 (514)
                      ..+ .+|++  +++|+++|+ .. |++++++++++.+...       ...+++++ ++..++++.++++.+.+   +++.
T Consensus       212 ~~~~~~di~~~s~sK~~~g~-~g-G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~  282 (405)
T 2vi8_A          212 NPVPYAHFVTTTTHKTLRGP-RG-GMILCQEQFAKQIDKA-------IFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYA  282 (405)
T ss_dssp             CSTTTCSEEEEESSSTTCCC-SC-EEEEECHHHHHHHHHH-------HTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred             CccccCCEEEEeccccCCCC-CC-eEEEEcHHHHHHHHhh-------hcccccCCCCHHHHHHHHHHHHHHHhhhHHHHH
Confidence            222 47877  688999864 33 9999999998887642       11223333 67777777788887654   4678


Q ss_pred             HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------
Q 010250          402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---------  472 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------  472 (514)
                      ++++++++++.+.|+++ +..+... .+.+.++.+.+.....          ....+.+.|.++||.+.++         
T Consensus       283 ~~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~gi~v~~g~~~~~~~~~  350 (405)
T 2vi8_A          283 KRVVDNAKRLASALQNE-GFTLVSG-GTDNHLLLVDLRPQQL----------TGKTAEKVLDEVGITVNKNTIPYDPESP  350 (405)
T ss_dssp             HHHHHHHHHHHHHHHHT-TCEEGGG-SCSSSEEEEECGGGTC----------CHHHHHHHHHHHTEECEEECCTTCSSCT
T ss_pred             HHHHHHHHHHHHHHHhC-CCeEecC-CCCceEEEEEccCCCC----------CHHHHHHHHHHcCceeccCcCccccCCC
Confidence            88999999999999876 3322211 1346777888753210          1445778888999999874         


Q ss_pred             --CCEEEEeCCC----CCCHHHHHHHHHHHHHHHHHH
Q 010250          473 --GDNIMMSPPF----IMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       473 --g~~iRi~p~~----~~t~e~id~~~~~l~~~l~~~  503 (514)
                        .+.+|++++.    .++++|+++++++|+++++++
T Consensus       351 ~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~  387 (405)
T 2vi8_A          351 FVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNV  387 (405)
T ss_dssp             TTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCT
T ss_pred             CCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhcc
Confidence              2469999886    688999999999999998655

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=99.89  E-value=5.2e-22  Score=199.32  Aligned_cols=311  Identities=15%  Similarity=0.149  Sum_probs=203.0

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc--CCCCeEEEeCChhHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA--SKMAKVFFTNSGSEANDT  177 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~--~~~~~v~~~~sGseA~~~  177 (514)
                      .+++||.++..  .++ .+|++.+|+.+++.+... +   ..+.....++.+.|++++..  .+.+++++++||++|++.
T Consensus        19 ~~~i~l~~~~~--~~~-~~~~v~~a~~~~~~~~~~-~---~y~~~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~   91 (335)
T 1uu1_A           19 RDKTYLALNEN--PFP-FPEDLVDEVFRRLNSDAL-R---IYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYV   91 (335)
T ss_dssp             CCSEEESSCCC--SSC-CCHHHHHHHHHTCCGGGG-G---SCCCSSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHH
T ss_pred             CcceECCCCCC--CCC-CCHHHHHHHHHHhhhhhh-h---cCCCCchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHH
Confidence            45788887743  465 689999999998743111 1   11222357888999988741  245789999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      +++.+           +++|++. ++||+........ |....            .++....|..+             +
T Consensus        92 ~~~~~-----------gd~Vl~~-p~y~~~~~~~~~~-g~~~~------------~v~~~~~~~~d-------------~  133 (335)
T 1uu1_A           92 MMLMF-----------DRSVFFP-PTYSCYRIFAKAV-GAKFL------------EVPLTKDLRIP-------------E  133 (335)
T ss_dssp             HHHHS-----------SEEEECS-SSCHHHHHHHHHH-TCEEE------------ECCCCTTSCCC-------------C
T ss_pred             HHHHh-----------CCcEEEC-CCcHHHHHHHHHc-CCeEE------------EeccCCCCCCC-------------H
Confidence            99764           3578888 9999875433222 21111            11111111100             1


Q ss_pred             HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecccCCCCchh
Q 010250          258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPDLV  336 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~~gv~pDiv  336 (514)
                      ++|        ++..+.++++| ++.+|.+.+    .+++.++++.+| ++|+||+|++|+. +.... .+.++....+.
T Consensus       134 ~~l--------~~~~~v~l~~p-~nptG~~~~----~~~l~~l~~~~~-~li~De~~~~~~~-~~~~~~~~~~~~~i~~~  198 (335)
T 1uu1_A          134 VNV--------GEGDVVFIPNP-NNPTGHVFE----REEIERILKTGA-FVALDEAYYEFHG-ESYVDFLKKYENLAVIR  198 (335)
T ss_dssp             CCC--------CTTEEEEEESS-CTTTCCCCC----HHHHHHHHHTTC-EEEEECTTHHHHC-CCCGGGGGTCSSEEEEE
T ss_pred             HHc--------CCCCEEEEeCC-CCCCCCCCC----HHHHHHHHHhCC-EEEEECcchhhcc-hhHHHHhhhCCCEEEEe
Confidence            112        12334444677 667777665    445555555558 9999999997743 21111 12222223345


Q ss_pred             chhhhhc-CCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHhh
Q 010250          337 SFAKALS-SAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQDG  414 (514)
Q Consensus       337 ~~sK~l~-gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~~~  414 (514)
                      ++||.++ .| +++|++++++++++.+...         ..+++.|+++++++.++|+..+ -++..++++++++++.+.
T Consensus       199 s~sK~~g~~G-~r~G~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~  268 (335)
T 1uu1_A          199 TFSKAFSLAA-QRVGYVVASEKFIDAYNRV---------RLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSA  268 (335)
T ss_dssp             ESTTTTTCGG-GCCEEEEECHHHHHHHHHH---------SCTTCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhcCCcc-cCeEEEEeCHHHHHHHHHh---------cCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence            7899987 45 8999999999999888742         1346788999999999887532 235677888888999998


Q ss_pred             hhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHH
Q 010250          415 VKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELIS  494 (514)
Q Consensus       415 L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~  494 (514)
                      |+++ ....   ....|.++++.+.. .           ....+.+.|.++||++.+..+.+|+++   .+++|++++++
T Consensus       269 L~~~-g~~~---~~~~~~~~~~~~~~-~-----------~~~~~~~~l~~~gi~v~~~~~~iRis~---~~~~~i~~~~~  329 (335)
T 1uu1_A          269 LREM-GYRI---TDSRGNFVFVFMEK-E-----------EKERLLEHLRTKNVAVRSFREGVRITI---GKREENDMILR  329 (335)
T ss_dssp             HHHH-TCCB---CCCCSSEEEEECCT-H-----------HHHHHHHHHHHHTEEEEEETTEEEEEC---CCHHHHHHHHH
T ss_pred             HHHC-CcEE---cCCCCeEEEEECCC-C-----------CHHHHHHHHHHCCEEEEECCCeEEEEe---CCHHHHHHHHH
Confidence            8876 3222   23346677776642 0           144678889999999999778899995   35788999999


Q ss_pred             HHHHH
Q 010250          495 KYGKA  499 (514)
Q Consensus       495 ~l~~~  499 (514)
                      +|+++
T Consensus       330 ~l~~~  334 (335)
T 1uu1_A          330 ELEVF  334 (335)
T ss_dssp             HHHCC
T ss_pred             HHHhh
Confidence            88753

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=99.89  E-value=3.7e-22  Score=204.71  Aligned_cols=324  Identities=15%  Similarity=0.132  Sum_probs=213.0

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCC-eEEEeCChhHHHHHHHHHHHHHHhhcCCCCcc
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMA-KVFFTNSGSEANDTQVKLVWYYNNALGRPNKK  195 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~-~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~  195 (514)
                      -+|++++|+.+++..  .++.   .+.....++.+.++++++. +.+ ++++++||++|++.+++.+.        .+++
T Consensus        29 ~~~~v~~a~~~~~~~--~~~~---~~~~~~~~l~~~la~~~~~-~~~~~v~~~~g~t~al~~~~~~~~--------~~gd   94 (396)
T 2ch1_A           29 CSKRVLTAMTNTVLS--NFHA---ELFRTMDEVKDGLRYIFQT-ENRATMCVSGSAHAGMEAMLSNLL--------EEGD   94 (396)
T ss_dssp             CCHHHHHHTTSCCCC--TTCH---HHHHHHHHHHHHHHHHHTC-CCSCEEEESSCHHHHHHHHHHHHC--------CTTC
T ss_pred             CCHHHHHHhcccccc--CCCh---hHHHHHHHHHHHHHHHhCC-CCCcEEEECCcHHHHHHHHHHHhc--------CCCC
Confidence            468888887665432  1111   1123467899999999853 445 79999999999999998873        3356


Q ss_pred             EEEEEecCCcccce-eeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEE
Q 010250          196 KFIARQKSYHGSTL-IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAA  274 (514)
Q Consensus       196 ~ii~~~~~yHG~t~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aa  274 (514)
                      +|++.+++|++... ......|...            ..++.+..+.             .++++|++.+.+.   ++++
T Consensus        95 ~vl~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~-------------~d~~~l~~~l~~~---~~~~  146 (396)
T 2ch1_A           95 RVLIAVNGIWAERAVEMSERYGADV------------RTIEGPPDRP-------------FSLETLARAIELH---QPKC  146 (396)
T ss_dssp             EEEEEESSHHHHHHHHHHHHTTCEE------------EEEECCTTSC-------------CCHHHHHHHHHHH---CCSE
T ss_pred             eEEEEcCCcccHHHHHHHHHcCCce------------EEecCCCCCC-------------CCHHHHHHHHHhC---CCCE
Confidence            89999999998631 1112222211            1111111111             1157788877642   3567


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeE
Q 010250          275 FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAI  352 (514)
Q Consensus       275 vivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v  352 (514)
                      |+++++++.+|.+.+    +++|.++|++||+++|+||+|+ +|..  .....  ...+|++++|  |.++++ .++|++
T Consensus       147 v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~Dea~~-~g~~--~~~~~--~~~~d~~~~s~~K~~~~~-~g~g~~  216 (396)
T 2ch1_A          147 LFLTHGDSSSGLLQP----LEGVGQICHQHDCLLIVDAVAS-LCGV--PFYMD--KWEIDAVYTGAQKVLGAP-PGITPI  216 (396)
T ss_dssp             EEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-BTTB--CCCTT--TTTCCEEECCCC-CCCCC-SSCEEE
T ss_pred             EEEECCCCCCceecC----HHHHHHHHHHcCCEEEEEcccc-ccCC--ccchh--hcCcCEEEEcCCccccCC-CCeEEE
Confidence            788888888898877    8999999999999999999997 6543  22222  2346877655  998876 578999


Q ss_pred             EeCHHHHHHhhhccCCCCccc---------------cc-CCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHh
Q 010250          353 LVSPEVSEVIHSQSNTLGSFS---------------HG-FTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQD  413 (514)
Q Consensus       353 ~~~~~i~~~l~~~~~~~~~~~---------------~~-~t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~  413 (514)
                      ++++++++.+.....+.+.+.               .. ..++.+..+++++.++|+.+.++   ++.++++++++++.+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~  296 (396)
T 2ch1_A          217 SISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYE  296 (396)
T ss_dssp             EECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             EECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence            999998887753211111101               01 12345667788888888876433   467888889999999


Q ss_pred             hhhhccCCCceeEEE--eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee-----CCEEEEeC-CCCC
Q 010250          414 GVKAFSDSPIIGEIR--GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS-----GDNIMMSP-PFIM  484 (514)
Q Consensus       414 ~L~~l~~~~~~~~v~--g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~-----g~~iRi~p-~~~~  484 (514)
                      .|+++ +..+.....  ..+.++.+.+....           ....+.+.|.++ ||.+.++     .+.+|+++ ++.+
T Consensus       297 ~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~  364 (396)
T 2ch1_A          297 GLGKM-GLDIFVKDPRHRLPTVTGIMIPKGV-----------DWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECS  364 (396)
T ss_dssp             HHHHH-TCCBSSCSGGGBCTTEEEEECCTTC-----------CHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGC
T ss_pred             HHHHC-CCeeccCCccccCCceEEEEcCCCC-----------CHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcC
Confidence            99876 333322110  12345666663211           145677888875 9999863     36799998 5678


Q ss_pred             CHHHHHHHHHHHHHHHHHHH
Q 010250          485 SPEEVDELISKYGKALKATE  504 (514)
Q Consensus       485 t~e~id~~~~~l~~~l~~~~  504 (514)
                      +++|+++++++|+++++++.
T Consensus       365 ~~e~i~~~~~~l~~~l~~~~  384 (396)
T 2ch1_A          365 TVQKIQFYLYGFKESLKATH  384 (396)
T ss_dssp             SHHHHHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHHHHHhC
Confidence            99999999999999987654

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.89  E-value=1.1e-21  Score=201.12  Aligned_cols=281  Identities=14%  Similarity=0.143  Sum_probs=188.9

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP  218 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~  218 (514)
                      +.+...+++++|+++++.   ++.++++||++|++.+++.+.        .++++|++.++.||+.....   ....+..
T Consensus        50 ~~~~~~~l~~~la~~~~~---~~~i~~~sGt~a~~~~~~~~~--------~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~  118 (386)
T 1cs1_A           50 GNPTRDVVQRALAELEGG---AGAVLTNTGMSAIHLVTTVFL--------KPGDLLVAPHDCYGGSYRLFDSLAKRGCYR  118 (386)
T ss_dssp             CCHHHHHHHHHHHHHHTC---SEEEEESSHHHHHHHHHHHHC--------CTTCEEEEETTCCHHHHHHHHHHHTTTSCE
T ss_pred             CCccHHHHHHHHHHHhCC---CcEEEeCCHHHHHHHHHHHHh--------CCCCEEEEecCCcHhHHHHHHHHHHhcCCE
Confidence            445667889999998843   256666888999999998763        34578999999998743211   0111110


Q ss_pred             cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ  298 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~  298 (514)
                                  +..++..                  +.+++++.+.    +++++|+++++++++|.+.+    +++|+
T Consensus       119 ------------~~~~~~~------------------d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----l~~i~  160 (386)
T 1cs1_A          119 ------------VLFVDQG------------------DEQALRAALA----EKPKLVLVESPSNPLLRVVD----IAKIC  160 (386)
T ss_dssp             ------------EEEECTT------------------CHHHHHHHHH----TCCSEEEEECSCTTTCCCCC----HHHHH
T ss_pred             ------------EEEeCCC------------------CHHHHHHhhc----cCCcEEEEeCCCCCCCcccC----HHHHH
Confidence                        1111110                  2577888775    35678999999999999886    99999


Q ss_pred             HHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccc-eeEEeCH-HHHHHhhhccCCCCcccc
Q 010250          299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPI-GAILVSP-EVSEVIHSQSNTLGSFSH  374 (514)
Q Consensus       299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pi-g~v~~~~-~i~~~l~~~~~~~~~~~~  374 (514)
                      ++|++||+++|+||+|+++... ...   .+  .+|++  +++|++++++.++ |++++++ ++++.+..       ..+
T Consensus       161 ~l~~~~~~~li~De~~~~~~~~-~~~---~~--~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~-------~~~  227 (386)
T 1cs1_A          161 HLAREVGAVSVVDNTFLSPALQ-NPL---AL--GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAW-------WAN  227 (386)
T ss_dssp             HHHHHTTCEEEEECTTTCTTTC-CGG---GG--TCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHH-------HHH
T ss_pred             HHHHHcCCEEEEECCCcccccC-Ccc---cc--CceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHH-------HHH
Confidence            9999999999999999976432 111   22  35665  6899998875666 8888886 78888763       233


Q ss_pred             cCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCcee----------EEEeeeeeEEEEEc
Q 010250          375 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFA  439 (514)
Q Consensus       375 ~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~v~g~g~~~~i~~~  439 (514)
                      +.+...++++++++.++++.+.  ...++..++.+.+.+.|+++..     .+.+.          ..++.|.++.+.+.
T Consensus       228 ~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  305 (386)
T 1cs1_A          228 NIGVTGGAFDSYLLLRGLRTLV--PRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELD  305 (386)
T ss_dssp             HHTCBCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES
T ss_pred             hcCCCCCHHHHHHHHhcccHHH--HHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEEC
Confidence            4456678998888877776543  2344455555566555554311     11110          12456888888875


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHCCcEEEe---e----------------------------CCEEEEeCCCCCCHHH
Q 010250          440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV---S----------------------------GDNIMMSPPFIMSPEE  488 (514)
Q Consensus       440 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~---~----------------------------g~~iRi~p~~~~t~e~  488 (514)
                      +.             ...+...|.++||+++.   +                            .+.||+++++..++++
T Consensus       306 ~~-------------~~~~~~~l~~~gi~~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~  372 (386)
T 1cs1_A          306 GD-------------EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDL  372 (386)
T ss_dssp             SC-------------HHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHH
T ss_pred             CC-------------HHHHHHHHHhCCcceEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHH
Confidence            31             23466778889998873   1                            2579999999878888


Q ss_pred             HHHHHHHHHHH
Q 010250          489 VDELISKYGKA  499 (514)
Q Consensus       489 id~~~~~l~~~  499 (514)
                      |+.+.++|+++
T Consensus       373 i~~l~~al~~~  383 (386)
T 1cs1_A          373 IADLENGFRAA  383 (386)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            77777776654

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=99.89  E-value=3.9e-22  Score=207.23  Aligned_cols=361  Identities=15%  Similarity=0.111  Sum_probs=206.6

Q ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccc-cccc---cCCchHHHHHHHHHHhcCcCCCCeEEEeCChh
Q 010250           97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYH-SFWN---RTTKPSLDLAKELLEMFTASKMAKVFFTNSGS  172 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~-~~~~---~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGs  172 (514)
                      .+|..|||+.++.      +.+|+|++|+.+++.....+. ..+.   ...+...++.++|+++++. +.++++|++||+
T Consensus        16 ~~~~~~Ld~~~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~-~~~~v~~~~g~t   88 (432)
T 3a9z_A           16 PNRKVYMDYNATT------PLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGG-KPQDIIFTSGGT   88 (432)
T ss_dssp             --CCEECBTTTCC------CCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTC-CGGGEEEESCHH
T ss_pred             CCCcEEeeCCccC------CCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCC-CcCeEEEeCChH
Confidence            3678899986552      679999999999987632111 1110   1123446889999998853 456899999999


Q ss_pred             HHHHHHHHHHHH-HHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCC----CCCcccccCCCC-cccCCCCC
Q 010250          173 EANDTQVKLVWY-YNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDL----PAPFVLHTDCPH-YWRYAHPG  246 (514)
Q Consensus       173 eA~~~Alk~a~~-~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~~~  246 (514)
                      +|++.+++.+.. +......+ +++|++.+++||++.....+....+.....+..    ....+..++... .++     
T Consensus        89 ~a~~~~~~~~~~~~~~~~~~~-gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~~~~-----  162 (432)
T 3a9z_A           89 ESNNLVIHSTVRCFHEQQTLQ-GRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQ-----  162 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHC-------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTTTSS-----
T ss_pred             HHHHHHHHHHHhhhhhccccC-CccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcccCC-----
Confidence            999999998742 21100012 368999999999863222222211111000000    001111222211 100     


Q ss_pred             CChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC----------CEEEEechhcC
Q 010250          247 ETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD----------ILFIADEVICA  316 (514)
Q Consensus       247 ~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g----------illI~DEv~tG  316 (514)
                              .++++|++.+.    +++++|+++++++++|.+.+    +++|.++|++||          +++|+||+|. 
T Consensus       163 --------~d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~~~~~~~~~livDea~~-  225 (432)
T 3a9z_A          163 --------VEVEDILAAVR----PTTCLVTIMLANNETGVIMP----ISEISRRIKALNQIRAASGLPRVLVHTDAAQA-  225 (432)
T ss_dssp             --------CCHHHHHHTCC----TTEEEEECCSBCTTTCBBCC----HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTT-
T ss_pred             --------cCHHHHHHhcc----CCceEEEEECcccCcccccC----HHHHHHHHHhcCcccccccCCceEEEEEchhh-
Confidence                    11466666553    36889999999999999887    899999999999          9999999995 


Q ss_pred             cccccccceecccCCCCchhc--hhhhhcCCcccceeEEeCHHH-HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHH
Q 010250          317 FGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGAILVSPEV-SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK  393 (514)
Q Consensus       317 ~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~v~~~~~i-~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~  393 (514)
                      +|+..  .  +.....+|+++  ++|.+  | .++|++++++++ ...+.+.....+......+++.++.+++++.++++
T Consensus       226 ~~~~~--~--~~~~~~~d~~~~s~~K~~--g-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~  298 (432)
T 3a9z_A          226 LGKRR--V--DVEDLGVDFLTIVGHKFY--G-PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAAD  298 (432)
T ss_dssp             TTTSC--C--CHHHHCCSEEEEEGGGTT--C-CSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHH
T ss_pred             hCCcc--c--ChhhcCCCEEEEehhHhc--C-CcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHH
Confidence            55432  1  21123478765  58976  3 469999998875 22222100000000111234567888888888888


Q ss_pred             HHhh--ccHHHHHHHHHHHHHhhhhhccCCCce--eE---EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH----
Q 010250          394 IYKE--RNIVEQVNKIAPKFQDGVKAFSDSPII--GE---IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC----  462 (514)
Q Consensus       394 ~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~--~~---v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l----  462 (514)
                      .+++  +++.++++++++++.+.|+++....+.  ..   .+..+.+..+.+.+....          ...+...+    
T Consensus       299 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~i~  368 (432)
T 3a9z_A          299 LVSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLR----------GYMVLAQCQTLL  368 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCC----------HHHHHHHCSSEE
T ss_pred             HHHhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCc----------HHHHHHHhcCeE
Confidence            7655  457788889999999999875221111  10   123355667777542100          12222222    


Q ss_pred             -------------------HHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          463 -------------------EKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       463 -------------------~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                                         ...|+......+.|||+++..+|++|+++++++|+++++++.
T Consensus       369 ~~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~  429 (432)
T 3a9z_A          369 ASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLE  429 (432)
T ss_dssp             CBSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EeccccccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhc
Confidence                               122221111236799999988899999999999999987543

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=99.89  E-value=1.4e-22  Score=209.22  Aligned_cols=339  Identities=11%  Similarity=0.058  Sum_probs=214.2

Q ss_pred             CCCEEEEccCCcccccCCC--CCHHHHHHHHH-HHhcCCccccccccCCchHHHHHHHHHHhcCc-----CCCCeEEE--
Q 010250           98 NGKKYLDSLAGLWCTALGG--SEPRLVAAATA-QLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-----SKMAKVFF--  167 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh--~~p~v~~A~~~-~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-----~~~~~v~~--  167 (514)
                      +|+.++||.+|....+-|+  .+|.|.+|+.+ +++.... +. + .+.....++.+.+++++..     ...++|++  
T Consensus        27 ~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~-~~-y-~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~  103 (412)
T 1yaa_A           27 QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYN-HE-Y-LGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQ  103 (412)
T ss_dssp             CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCC-CC-C-CCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEE
T ss_pred             CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccc-cC-C-CCCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEe
Confidence            4677899998865444454  46899999998 8763211 00 1 1223346677777776621     13578999  


Q ss_pred             eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCC
Q 010250          168 TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHP  245 (514)
Q Consensus       168 ~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  245 (514)
                      ++||++|++.+++++...      .++++|++.+++|++........+.. .            ..++.  +..+.    
T Consensus       104 t~g~~~a~~~~~~~~~~~------~~gd~Vl~~~p~~~~~~~~~~~~g~~-~------------~~v~~~~~~~~~----  160 (412)
T 1yaa_A          104 SLSGTGALHISAKFFSKF------FPDKLVYLSKPTWANHMAIFENQGLK-T------------ATYPYWANETKS----  160 (412)
T ss_dssp             EEHHHHHHHHHHHHHHHH------CTTCCEEEEESCCTTHHHHHHTTTCC-E------------EEEECEETTTTE----
T ss_pred             ccchHhHHHHHHHHHHHh------CCCCEEEEeCCCCccHHHHHHHcCce-E------------EEEeeecCCCCc----
Confidence            999999999997766533      23468999999999975433322211 1            01111  00011    


Q ss_pred             CCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc---c
Q 010250          246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG---T  322 (514)
Q Consensus       246 ~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G---~  322 (514)
                               .++++|++.+.+.. ...+++++...++++|.+ .+.+.+++|.++|++||+++|+||+|.+|++.|   .
T Consensus       161 ---------~d~~~l~~~l~~~~-~~~~~~~~~~p~nPtG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~  229 (412)
T 1yaa_A          161 ---------LDLNGFLNAIQKAP-EGSIFVLHSCAHNPTGLD-PTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKD  229 (412)
T ss_dssp             ---------ECHHHHHHHHHHSC-TTCEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHH
T ss_pred             ---------cCHHHHHHHHHhCC-CCCEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHCCCEEEEecccccccCCcccch
Confidence                     12577888776432 234555545556666754 467889999999999999999999999886654   2


Q ss_pred             ccee-cccCCCC----ch--hchhhhhcCCcccceeEE--e-----CHH----HHHHhhhccCCCCcccccCCCCCcHHH
Q 010250          323 MFGC-DKYSIKP----DL--VSFAKALSSAYMPIGAIL--V-----SPE----VSEVIHSQSNTLGSFSHGFTYSGHPVS  384 (514)
Q Consensus       323 ~~~~-~~~gv~p----Di--v~~sK~l~gG~~pig~v~--~-----~~~----i~~~l~~~~~~~~~~~~~~t~~~~pl~  384 (514)
                      .... ......+    ++  .++||.++..++++|+++  +     +++    +++.+..       .....+.+.++++
T Consensus       230 ~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~-------~~~~~~~~~~~~~  302 (412)
T 1yaa_A          230 AYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAK-------IIRSEVSNPPAYG  302 (412)
T ss_dssp             THHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHH-------HHHTTTSSCCHHH
T ss_pred             hHHHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHH-------HHhhccCCCChHH
Confidence            2222 1111223    22  368999987238999998  7     566    6766653       1112233457888


Q ss_pred             HHHHHHHHHHHh--------hccHHHHHHHHHHHHHhhhhhcc---CCCceeEEEeee-eeEEEEEccCCCCCCCCCCcc
Q 010250          385 CAVAIEALKIYK--------ERNIVEQVNKIAPKFQDGVKAFS---DSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEW  452 (514)
Q Consensus       385 ~aaa~aal~~~~--------~~~~~~~~~~~~~~l~~~L~~l~---~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~  452 (514)
                      ++++.++|+...        -+++.++++++++++.+.|+++.   ...+.   ...+ .+..+.+.             
T Consensus       303 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~~~~~~~~~~~~-------------  366 (412)
T 1yaa_A          303 AKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHI---VNQCGMFSFTGLT-------------  366 (412)
T ss_dssp             HHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHH---HHCCSSEEECCCC-------------
T ss_pred             HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeee---ccCceEEEeeCCC-------------
Confidence            888888887542        23567788888899999998762   12222   1223 33222111             


Q ss_pred             chHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          453 GIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       453 ~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                        ...+...+.++||++.+   .+||+++. .|++++++++++|+++++.
T Consensus       367 --~~~~~~~l~~~gi~v~~---~~Ris~~~-~~~~~i~~~~~~l~~~~~~  410 (412)
T 1yaa_A          367 --PQMVKRLEETHAVYLVA---SGRASIAG-LNQGNVEYVAKAIDEVVRF  410 (412)
T ss_dssp             --HHHHHHHHHHHCEECCT---TSEEEGGG-CCTTTHHHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHhCCEEecc---CcEEEEcc-CCHhHHHHHHHHHHHHHHh
Confidence              23354555678999876   57999763 5999999999999988753

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=99.89  E-value=1.6e-22  Score=207.57  Aligned_cols=338  Identities=12%  Similarity=0.062  Sum_probs=210.3

Q ss_pred             CCEEEEccCCcccccCCCCC--HHHHHHHHH-HHhcCCc-cccccccCCchHHHHHHHHHHhcCcC-----CCC--eEEE
Q 010250           99 GKKYLDSLAGLWCTALGGSE--PRLVAAATA-QLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTAS-----KMA--KVFF  167 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~--p~v~~A~~~-~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~~~-----~~~--~v~~  167 (514)
                      ...++||..|.+..+.|+.+  |+|.+|+.+ +++.... .+.    ......++.+.+++++...     ..+  ++++
T Consensus        25 ~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~----~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~  100 (397)
T 3fsl_A           25 RSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYL----PMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQ  100 (397)
T ss_dssp             CSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCC----CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEE
T ss_pred             CCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCC----CCCchHHHHHHHHHHHhcCCcccccccceEEEE
Confidence            34689999997666777765  999999999 8875221 111    1122345556666655221     346  8999


Q ss_pred             eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCC
Q 010250          168 TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHP  245 (514)
Q Consensus       168 ~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  245 (514)
                      ++||++|++.++++....      .++++|++.+++|++........+....             .++.  ++.+.    
T Consensus       101 t~g~~~a~~~~~~~~~~~------~~gd~vl~~~p~~~~~~~~~~~~g~~~~-------------~~~~~~~~~~~----  157 (397)
T 3fsl_A          101 TLGGSGALKVGADFLKRY------FPESGVWVSDPTWENHVAIFAGAGFEVS-------------TYPWYDEATNG----  157 (397)
T ss_dssp             ESHHHHHHHHHHHHHHHH------CTTCCEEEESSCCHHHHHHHHHTTCCEE-------------EECCEETTTTE----
T ss_pred             cCCcHHHHHHHHHHHHhc------CCCCeEEEeCCCchhHHHHHHHcCCceE-------------EEeeeeccCCc----
Confidence            999999999998765322      3456899999999987544333222111             1111  00010    


Q ss_pred             CCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc--cc
Q 010250          246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG--TM  323 (514)
Q Consensus       246 ~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G--~~  323 (514)
                               .++++|++.+.+.. +++.++++...++++|.+. +.+.+++|.++|++||+++|+||+|++|...+  ..
T Consensus       158 ---------~d~~~l~~~l~~~~-~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~  226 (397)
T 3fsl_A          158 ---------VRFNDLLATLKTLQ-AGSIVLLHPCCHNPTGADL-TNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDA  226 (397)
T ss_dssp             ---------ECHHHHHHHHTTCC-TTCEEEECSSSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGG
T ss_pred             ---------CcHHHHHHHHHhCC-CCCEEEEeCCCCCCCCcCC-CHHHHHHHHHHHHhCCEEEEEecCchhhccCccccc
Confidence                     01577888776432 3567777777777788654 56779999999999999999999999886542  11


Q ss_pred             ceeccc-CCCCc---hhchhhhhc-CCcccceeEEe---CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250          324 FGCDKY-SIKPD---LVSFAKALS-SAYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY  395 (514)
Q Consensus       324 ~~~~~~-gv~pD---iv~~sK~l~-gG~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~  395 (514)
                      .....+ +..++   +.++||.++ .| +++|++++   ++++++.+....   .......+...++++++++.++++..
T Consensus       227 ~~~~~~~~~~~~~i~~~S~SK~~~~~G-~riG~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~  302 (397)
T 3fsl_A          227 YAIRAIASAGLPALVSNSFSKIFSLYG-ERVGGLSVMCEDAEAAGRVLGQL---KATVRRNYSSPPNFGAQVVAAVLNDE  302 (397)
T ss_dssp             HHHHHHHHTTCCEEEEEECTTTTTCGG-GCCEEEEEECSSHHHHHHHHHHH---HHHHHTTTSSCCSHHHHHHHHHHTSH
T ss_pred             HHHHHHHhcCCCEEEEecccccccCcC-CCeeEEEEecCCHHHHHHHHHHH---HHHHHhccCCCCHHHHHHHHHHhcCH
Confidence            111111 22222   336899988 45 89999974   556665443210   01111223344666666666555421


Q ss_pred             ------h--hccHHHHHHHHHHHHHhhhhhcc---CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH
Q 010250          396 ------K--ERNIVEQVNKIAPKFQDGVKAFS---DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK  464 (514)
Q Consensus       396 ------~--~~~~~~~~~~~~~~l~~~L~~l~---~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~  464 (514)
                            .  -+++.++++++.+++.+.|+++.   .....  ....|.+..+.+.               ...+...+.+
T Consensus       303 ~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~--~~~~~~~~~~~~~---------------~~~~~~~l~~  365 (397)
T 3fsl_A          303 ALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYL--LNQRGMFSYTGLS---------------AAQVDRLREE  365 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHH--HHCCSSEEECCCC---------------HHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceee--cCCceEEEecCCC---------------HHHHHHHHHh
Confidence                  1  13567888889999999998762   12211  1122334333321               2346667788


Q ss_pred             CCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250          465 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       465 ~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~  499 (514)
                      +||++.+++   ||++. .+++++|++++++|+++
T Consensus       366 ~gi~v~~g~---Ris~~-~~~~~~i~~~~~~l~~~  396 (397)
T 3fsl_A          366 FGVYLIASG---RMCVA-GLNTANVQRVAKAFAAV  396 (397)
T ss_dssp             TCEECCTTC---EEEGG-GCCTTTHHHHHHHHHHH
T ss_pred             CCEEECCCC---eEEEE-ecCHhhHHHHHHHHHhh
Confidence            999998765   88863 45778899999999875

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.89  E-value=1.9e-21  Score=201.16  Aligned_cols=305  Identities=13%  Similarity=0.104  Sum_probs=200.9

Q ss_pred             ccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCC
Q 010250          112 TALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR  191 (514)
Q Consensus       112 ~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~  191 (514)
                      ..++|.+|+.++++..  ....+.+.  ....+...+++++++++++   .+++++++||++|++.+++.+.        
T Consensus        28 ~~~~~~~~~~~~~~~~--~~~~~~y~--~~~~~~~~~l~~~la~~~g---~~~~~~~~~gt~a~~~al~~l~--------   92 (412)
T 2cb1_A           28 AAYGFKTLEEGQERFA--TGEGYVYA--RQKDPTAKALEERLKALEG---ALEAVVLASGQAATFAALLALL--------   92 (412)
T ss_dssp             SBCCCSSHHHHHHHHH--HCCSCSBT--TTCCHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHHTTC--------
T ss_pred             ceeecCChHHHHHHhc--cccCcCcC--CCCChHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------
Confidence            4577877776665544  22222111  1234667889999999983   4589999999999999998763        


Q ss_pred             CCccEEEEEecCCcccceee---eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC
Q 010250          192 PNKKKFIARQKSYHGSTLIA---ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG  268 (514)
Q Consensus       192 ~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~  268 (514)
                      .++++|++.++.|++.....   ....|..            +..++.             +      .++|++.+.   
T Consensus        93 ~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~------------~~~~~~-------------~------~~~l~~~i~---  138 (412)
T 2cb1_A           93 RPGDEVVAAKGLFGQTIGLFGQVLSLMGVT------------VRYVDP-------------E------PEAVREALS---  138 (412)
T ss_dssp             CTTCEEEEETTCCHHHHHHHHHTTTTTTCE------------EEEECS-------------S------HHHHHHHCC---
T ss_pred             CCCCEEEEeCCCchhHHHHHHHHHHHcCCE------------EEEECC-------------C------HHHHHHHhc---
Confidence            33568999999887643211   1111111            111111             0      367777664   


Q ss_pred             CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCc
Q 010250          269 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAY  346 (514)
Q Consensus       269 ~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~  346 (514)
                       +++++|++|++++++|.+.+    +++|.++|++||+++|+||+|++++...     ...+..+|+++  ++|.+++++
T Consensus       139 -~~~~~v~~~~~~n~~G~~~~----l~~i~~l~~~~~~~li~D~~~~~~~~~~-----~~~~~~~di~~~S~~K~~~~~~  208 (412)
T 2cb1_A          139 -AKTRAVFVETVANPALLVPD----LEALATLAEEAGVALVVDNTFGAAGALC-----RPLAWGAHVVVESLTKWASGHG  208 (412)
T ss_dssp             -TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHTCEEEEECGGGTTTTSC-----CGGGGTCSEEEEETTTTTTCSS
T ss_pred             -cCCeEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCCccccccC-----CccccCCeEEEECCcccccCCC
Confidence             46889999999999999886    9999999999999999999998653221     22234578876  789998765


Q ss_pred             ccceeEEeCH----------------------------HHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc
Q 010250          347 MPIGAILVSP----------------------------EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER  398 (514)
Q Consensus       347 ~pig~v~~~~----------------------------~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~  398 (514)
                      .++|++++.+                            ++.+.++...      .....+..+|.+++.+...++.+.  
T Consensus       209 ~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~------~~~~g~~~~~~~a~~~~~~l~~l~--  280 (412)
T 2cb1_A          209 SVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLG------LSLCGMALSPFNAYLLFQGLETVA--  280 (412)
T ss_dssp             CCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHH------TTTTCCCCCHHHHHHHHHHGGGHH--
T ss_pred             CcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHH------HHhcCCCCChHHhHHHHcCCchHH--
Confidence            7889887644                            3333333210      011223557888888777776553  


Q ss_pred             cHHHHHHHHHHHHHhhhhhccCCCcee-E--------------EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH
Q 010250          399 NIVEQVNKIAPKFQDGVKAFSDSPIIG-E--------------IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE  463 (514)
Q Consensus       399 ~~~~~~~~~~~~l~~~L~~l~~~~~~~-~--------------v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~  463 (514)
                      ...++..++.+++.+.|.+......+. .              .++.|.++.+.+ . .            .+.+...|.
T Consensus       281 ~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv~~~~-~-~------------~~~~~~~l~  346 (412)
T 2cb1_A          281 LRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPILTLDL-G-D------------LERASRFLG  346 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEEEEEC-S-S------------HHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEe-C-C------------HHHHHHHHH
Confidence            335566678888888887652222110 0              035677888888 3 2            234556677


Q ss_pred             HCCcEEEee-------------------------------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250          464 KHGMLVRVS-------------------------------GDNIMMSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       464 ~~Gv~~~~~-------------------------------g~~iRi~p~~~~t~e~id~~~~~l~~  498 (514)
                      +.|+.+ ..                               .+.||++.....++++|+.++++|++
T Consensus       347 ~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~~i~~l~~al~~  411 (412)
T 2cb1_A          347 AIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLDLLALFEEALEA  411 (412)
T ss_dssp             HCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred             hCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence            788886 32                               25699999999999999999988864

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=99.89  E-value=2.1e-21  Score=197.75  Aligned_cols=339  Identities=14%  Similarity=0.136  Sum_probs=214.9

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-ccccc---cCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWN---RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND  176 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~~~~---~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~  176 (514)
                      .|||+.++      |+.+|+|++|+.+++.+.... ++.+.   ...+...++.+.++++++. +.+++++++||++|++
T Consensus         2 ~yld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~-~~~~v~~~~g~t~a~~   74 (382)
T 4eb5_A            2 AYFDYTSA------KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNG-GGGTVVFTSGATEANN   74 (382)
T ss_dssp             CBCBTTTC------CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTC-TTEEEEEESSHHHHHH
T ss_pred             eeeccCCC------CCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCC-CCCeEEEcCchHHHHH
Confidence            37887655      468999999999998753111 11010   1234567889999998853 3468999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec--CCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL--SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      .+++.+..+..    .+++.|++.+++|++.......+  .|..            +..++....+.             
T Consensus        75 ~~~~~l~~~~~----~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~-------------  125 (382)
T 4eb5_A           75 LAIIGYAMRNA----RKGKHILVSAVEHMSVINPAKFLQKQGFE------------VEYIPVGKYGE-------------  125 (382)
T ss_dssp             HHHHHHHHHHG----GGCCEEEEETTCCHHHHHHHHHHTTTTCE------------EEEECBCTTSC-------------
T ss_pred             HHHHHHHhhcc----CCCCEEEECCCcchHHHHHHHHHHhCCcE------------EEEeccCCCCc-------------
Confidence            99998752211    12357999999988763322211  1211            11111111110             


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCc
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD  334 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pD  334 (514)
                      .++++|++.+.    +++++|+++.+++++|.+.+    +++|.++|++||++ |+||+|+ +|...  .....+  .+|
T Consensus       126 ~d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~-i~D~a~~-~g~~~--~~~~~~--~~d  191 (382)
T 4eb5_A          126 VDVSFIDQKLR----DDTILVSVQHANNEIGTIQP----VEEISEVLAGKAAL-HIDATAS-VGQIE--VDVEKI--GAD  191 (382)
T ss_dssp             BCHHHHHHHCC----TTEEEEECCSBCTTTCBBCC----HHHHHHHHTTSSEE-EEECTTT-BTTBC--CCHHHH--TCS
T ss_pred             cCHHHHHHHhc----CCCeEEEEeccCCCccccCC----HHHHHHHHHHCCCE-EEEcchh-cCCcc--cCcccc--CCC
Confidence            11467776664    35788999999999998887    89999999999999 9999997 65331  112222  467


Q ss_pred             hhc--hhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHH
Q 010250          335 LVS--FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPK  410 (514)
Q Consensus       335 iv~--~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~  410 (514)
                      +++  ++|.++.  .++|+++++++.  .+.+.....+........+.++..++++.++++.+.+  +++.++++++.++
T Consensus       192 i~~~s~sK~~g~--~g~G~~~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~  267 (382)
T 4eb5_A          192 MLTISSNDIYGP--KGVGALWIRKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDR  267 (382)
T ss_dssp             EEEEETGGGTCC--SSCEEEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEeehHHhcCC--CceEEEEEcccc--ccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            764  5696432  347888888763  1211000000000111234566677777778887654  3567778888888


Q ss_pred             HHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----------------
Q 010250          411 FQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----------------  472 (514)
Q Consensus       411 l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----------------  472 (514)
                      +.+.|+++....+.... ...+.++.+.+...            ....+.+.|.++||.+.++                 
T Consensus       268 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~  335 (382)
T 4eb5_A          268 IIDNVLKIEESYLNGHPEKRLPNNVNVRFSYI------------EGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMAC  335 (382)
T ss_dssp             HHHHHTTSTTEEECSCSSSBCTTEEEEEETTS------------CHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHT
T ss_pred             HHHHHhhCCCeEEeCCcccCCCCEEEEEeCCc------------CHHHHHHHHHHCCEEEeccccccCCCCcccHHHHHc
Confidence            88888765211111100 01244666666421            1456788888999998863                 


Q ss_pred             -------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          473 -------GDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       473 -------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                             .+.|||+++..+|++++++++++|+++++++.+
T Consensus       336 g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~  375 (382)
T 4eb5_A          336 GLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS  375 (382)
T ss_dssp             TCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence                   257999988889999999999999999877654

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.89  E-value=3.8e-22  Score=205.31  Aligned_cols=284  Identities=15%  Similarity=0.102  Sum_probs=186.6

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee---ecCCCc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLP  218 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~---~~s~~~  218 (514)
                      +.+...+++++++++++   .+++++++||++|++.+++.+.        .++++||+.++.||+......   ...|..
T Consensus        62 ~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~~l~~~~--------~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~  130 (398)
T 2rfv_A           62 GNPTTDALEKKLAVLER---GEAGLATASGISAITTTLLTLC--------QQGDHIVSASAIYGCTHAFLSHSMPKFGIN  130 (398)
T ss_dssp             CCHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHHHHC--------CTTCEEEEESSSCHHHHHHHHTHHHHTTCE
T ss_pred             CChHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEcCCCcccHHHHHHHHHHHcCCE
Confidence            56777899999999984   3478889999999999998773        335789999999988643221   111211


Q ss_pred             cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ  298 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~  298 (514)
                                  +..++..                  +++++++.+.    +++++|+++++++++|.+.+    +++|.
T Consensus       131 ------------~~~v~~~------------------d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----l~~i~  172 (398)
T 2rfv_A          131 ------------VRFVDAA------------------KPEEIRAAMR----PETKVVYIETPANPTLSLVD----IETVA  172 (398)
T ss_dssp             ------------EEEECTT------------------SHHHHHHHCC----TTEEEEEEESSBTTTTBCCC----HHHHH
T ss_pred             ------------EEEeCCC------------------CHHHHHHhcC----CCCeEEEEECCCCCCCcccC----HHHHH
Confidence                        1111111                  1466666653    36889999999999999886    99999


Q ss_pred             HHHHhcCCEEEEechhcCcccccccceecccCCCCch--hchhhhhcCCcccc-eeEEeCHHHHH-HhhhccCCCCcccc
Q 010250          299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL--VSFAKALSSAYMPI-GAILVSPEVSE-VIHSQSNTLGSFSH  374 (514)
Q Consensus       299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi--v~~sK~l~gG~~pi-g~v~~~~~i~~-~l~~~~~~~~~~~~  374 (514)
                      ++|++||+++|+||+|+.+ ..+...   .++  +|+  .+++|.+++++.|+ |++++++++++ .+..       +.+
T Consensus       173 ~l~~~~~~~li~De~~~~~-~~~~~~---~~~--~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~-------~~~  239 (398)
T 2rfv_A          173 GIAHQQGALLVVDNTFMSP-YCQQPL---QLG--ADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFV-------GLK  239 (398)
T ss_dssp             HHHHHTTCEEEEECTTTCT-TTCCGG---GGT--CSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHT-------HHH
T ss_pred             HHHHHcCCEEEEECCCccc-ccCCch---hhC--CcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHH-------HHH
Confidence            9999999999999999832 333221   223  565  47889998755788 99999998876 5542       233


Q ss_pred             cC-CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-----------cCCCceeE----EEeeeeeEEEEE
Q 010250          375 GF-TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-----------SDSPIIGE----IRGTGLILGTEF  438 (514)
Q Consensus       375 ~~-t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-----------~~~~~~~~----v~g~g~~~~i~~  438 (514)
                      .. +.+.++++++++.++|+.+.+  ..++..++.+.+.+.|++.           ...|.+..    .++.|.++.+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~  317 (398)
T 2rfv_A          240 DITGGCMSPFNAWLTLRGVKTLGI--RMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEI  317 (398)
T ss_dssp             HTTCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEE
T ss_pred             hCCCCCCCHHHHHHHHhhhhhHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEE
Confidence            33 456789999999988875432  2344444555555555432           11121111    124688888888


Q ss_pred             ccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----------------------------CCEEEEeCCCCCCHHHHH
Q 010250          439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------------------------GDNIMMSPPFIMSPEEVD  490 (514)
Q Consensus       439 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------------------g~~iRi~p~~~~t~e~id  490 (514)
                      .+..          .....+...+...|+.+.++                            .+.|||+++...++++|+
T Consensus       318 ~~~~----------~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~  387 (398)
T 2rfv_A          318 AGGL----------EAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIIN  387 (398)
T ss_dssp             TTHH----------HHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHH
T ss_pred             cCCH----------HHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHH
Confidence            6310          01222333333334443221                            357999999999999999


Q ss_pred             HHHHHHHHH
Q 010250          491 ELISKYGKA  499 (514)
Q Consensus       491 ~~~~~l~~~  499 (514)
                      .++++|+++
T Consensus       388 ~l~~al~~~  396 (398)
T 2rfv_A          388 DLEHAIRKA  396 (398)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhh
Confidence            988888653

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=99.89  E-value=1.6e-22  Score=209.74  Aligned_cols=343  Identities=10%  Similarity=0.032  Sum_probs=215.6

Q ss_pred             EEEccCCccccc-CCCCCHHHHHHHHHHHh--cCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHH--H
Q 010250          102 YLDSLAGLWCTA-LGGSEPRLVAAATAQLN--TLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAN--D  176 (514)
Q Consensus       102 ylD~~s~~~~~~-lGh~~p~v~~A~~~~l~--~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~--~  176 (514)
                      .|||..|..... ++ .+|.+++++.+++.  ...... .| .......++.+.|+++++ .+.++|++++++++++  .
T Consensus        34 ~i~l~~g~~~~~~~~-~~~~~~~a~~~~~~~~~~~~~~-~Y-~~~~G~~~lr~~ia~~~~-~~~~~i~~t~G~~~al~l~  109 (422)
T 3d6k_A           34 SLDLTRGKPSAEQLD-LSNDLLSLPGGDFRTKDGVDCR-NY-GGLLGIADIRELWAEALG-LPADLVVAQDGSSLNIMFD  109 (422)
T ss_dssp             CEECCCCSCCHHHHH-TTGGGGGCSTTCCBCTTCCBTT-SS-CCSSCCHHHHHHHHHHHT-CCGGGEEECSSCHHHHHHH
T ss_pred             eEeCCCCCCChhhCC-CcHHHHHHHHHHHhhccchhhh-CC-CCCCCCHHHHHHHHHHhC-CChhHEEEecchHHHHHHH
Confidence            688877743100 22 34567777665531  110010 11 122235788888888874 4567999999999997  5


Q ss_pred             HHHHHHHHHHhhcCCCC--------ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCC
Q 010250          177 TQVKLVWYYNNALGRPN--------KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGET  248 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~--------~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (514)
                      .+++....    ...++        +++|++.+++|++........+....             .++...          
T Consensus       110 ~~~~~l~~----~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~-------------~v~~~~----------  162 (422)
T 3d6k_A          110 LISWSYTW----GNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMI-------------NVPMTD----------  162 (422)
T ss_dssp             HHHHHHHH----CCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEE-------------EEEEET----------
T ss_pred             HHHHHhcC----cccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEE-------------ecCCCC----------
Confidence            55555431    10011        34799999999988644333222111             011000          


Q ss_pred             hhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHH-hcCCEEEEechhc--Ccccccccc
Q 010250          249 EEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVK-KYDILFIADEVIC--AFGRLGTMF  324 (514)
Q Consensus       249 ~~~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~-~~gillI~DEv~t--G~gr~G~~~  324 (514)
                       +.   .++++|++.+..   .++++|++.| .++++|.+ .+.+++++|.++|+ +||+++|+||+|.  +|+..|..+
T Consensus       163 -~g---~d~~~l~~~l~~---~~~~~v~~~~~~~NPtG~~-~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~  234 (422)
T 3d6k_A          163 -EG---PDMGVVRELVKD---PQVKGMWTVPVFGNPTGVT-FSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIV  234 (422)
T ss_dssp             -TE---ECHHHHHHHHTS---TTEEEEEECCSSCTTTCCC-CCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCC
T ss_pred             -CC---CCHHHHHHHHhc---CCCeEEEEcCCCCCCCCCC-CCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCC
Confidence             00   125777777742   3577777555 46667765 46789999999999 9999999999997  465544321


Q ss_pred             -ee-------cccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH-
Q 010250          325 -GC-------DKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY-  395 (514)
Q Consensus       325 -~~-------~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~-  395 (514)
                       ..       +..+...++.+|||.+..| +++|++++++++++.+..       .....+++.++++++++.++|+.. 
T Consensus       235 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~G-lriG~~~~~~~l~~~l~~-------~~~~~~~~~~~~~q~a~~~~l~~~~  306 (422)
T 3d6k_A          235 HNVIEFAQAAGNPNRFWFMSSTSKITHAG-SGVSFFASSKENIEWYAS-------HANVRGIGPNKLNQLAHAQFFGDVA  306 (422)
T ss_dssp             CCHHHHHHHTTCTTCEEEEEESTTTSCTT-SSCEEEECCHHHHHHHHH-------HHHHHCSCCCHHHHHHHHHHHCSHH
T ss_pred             cChhhHhhccCCCCcEEEEcChhhhcCcc-cceEEEEeCHHHHHHHHH-------HHHhhcCCCCHHHHHHHHHHHhCcc
Confidence             22       1223334455899984445 899999999999988863       233456778899999888887631 


Q ss_pred             --hh--ccHHHHHHHHHHHHHhhhhhc-cCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEE
Q 010250          396 --KE--RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV  469 (514)
Q Consensus       396 --~~--~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~  469 (514)
                        .+  ++..+.++++.+.+.+.|.+. ...+.+..+. ..|.++++.+....            ...+...|.++||++
T Consensus       307 ~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~~~~~~~~~~------------~~~~~~~l~~~gV~v  374 (422)
T 3d6k_A          307 GLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKWTSPTGGYFISVDVVPGT------------ASRVVELAKEAGIAL  374 (422)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEECCCSBSSCEEEEESTTC------------HHHHHHHHHHTTEEC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEEeCCCcceEEEEECCCCC------------HHHHHHHHHHCCeEE
Confidence              11  223455566667777777653 2223222222 24677888885320            345778889999999


Q ss_pred             Eee-----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          470 RVS-----------GDNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       470 ~~~-----------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      .++           .+.|||+++. ++++++++++++|+++++++.
T Consensus       375 ~~~g~~f~~~~~~~~~~iRis~~~-~~~e~i~~~~~~l~~~l~~~~  419 (422)
T 3d6k_A          375 TGAGSSFPLHNDPNNENIRLAPSL-PPVAELEVAMDGFATCVLMAA  419 (422)
T ss_dssp             CCTTTTSGGGCCTTSCEEEECCSS-SCHHHHHHHHHHHHHHHHHHH
T ss_pred             EcCccccCCCCCCCCCeEEEecCC-CCHHHHHHHHHHHHHHHHHHH
Confidence            872           2469999776 899999999999999987654

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=99.88  E-value=2.3e-21  Score=204.24  Aligned_cols=333  Identities=13%  Similarity=0.101  Sum_probs=210.5

Q ss_pred             CCCCCHHHHHHHHHHHhcCCcccc--ccccCCchHHHHHHHHHHhcCcCCCC-eEEEeCChhHHHHHHHHHHHHHHhhcC
Q 010250          114 LGGSEPRLVAAATAQLNTLPFYHS--FWNRTTKPSLDLAKELLEMFTASKMA-KVFFTNSGSEANDTQVKLVWYYNNALG  190 (514)
Q Consensus       114 lGh~~p~v~~A~~~~l~~~~~~~~--~~~~~~~~~~ela~~L~~~~~~~~~~-~v~~~~sGseA~~~Alk~a~~~~~~~~  190 (514)
                      .+|.+|++++++.++...+..+..  ...+..+...+++++++++++   .+ .++++++|++|+..|+++++.+...++
T Consensus        75 ~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g---~~~~~~~~~ggt~a~~~al~~~~~~~~~~G  151 (474)
T 1wyu_B           75 TMKYNPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTG---MDAITLEPAAGAHGELTGILIIRAYHEDRG  151 (474)
T ss_dssp             CCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHT---CSEEECCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccCCHHHHHHHHHHHHhcCCCCchhhChHHHHHHHHHHHHHHHHHC---CCceeecChHHHHHHHHHHHHHHHHHHhcC
Confidence            457789999988876322111110  011223456778888888873   33 355789999999999999887654445


Q ss_pred             C-CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250          191 R-PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP  269 (514)
Q Consensus       191 ~-~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~  269 (514)
                      . +++++||+.+ .+|+....++...|...            ..+++...++             .++++|++.+.    
T Consensus       152 d~~~r~~Vlv~~-~~h~~~~~~~~~~G~~v------------v~v~~~~~~~-------------~d~~~L~~~i~----  201 (474)
T 1wyu_B          152 EGRTRRVVLVPD-SAHGSNPATASMAGYQV------------REIPSGPEGE-------------VDLEALKRELG----  201 (474)
T ss_dssp             CTTTCCEEEEET-TSCTHHHHHHHHTTCEE------------EEECBCTTSS-------------BCHHHHHHHCS----
T ss_pred             CccCCCEEEEeC-CcChhhHHHHHHCCCEE------------EEecCCCCCC-------------cCHHHHHHhhC----
Confidence            3 4556777766 66676655544433221            1122211111             11577777664    


Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhch--hhhhcC---
Q 010250          270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSS---  344 (514)
Q Consensus       270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~g---  344 (514)
                      +++++|+++..+ ..|.+.   +.+++|.++|++||+++|+||+|.. +..|.. ....+  .+|++++  +|.+++   
T Consensus       202 ~~t~~v~~~~pn-~~G~~~---~~l~~i~~l~~~~g~~li~Dea~~~-~~~g~~-~~~~~--g~di~~~s~~K~~~~p~g  273 (474)
T 1wyu_B          202 PHVAALMLTNPN-TLGLFE---RRILEISRLCKEAGVQLYYDGANLN-AIMGWA-RPGDM--GFDVVHLNLHKTFTVPHG  273 (474)
T ss_dssp             TTEEEEEECSSC-TTSCCC---TTHHHHHHHHHHHTCEEEEEGGGGG-GTTTTC-CHHHH--TCSEEECCTTTTTCCCCT
T ss_pred             CCceEEEEECCC-CCcccC---CCHHHHHHHHHHcCCEEEEeCchhh-hhccCC-CcccC--CCcEEEEeCccccccCCC
Confidence            467888888754 578773   2299999999999999999999963 233321 11222  3788866  798763   


Q ss_pred             -CcccceeEEeCHHHHHHhhhc-----cC-------CCCcccccCCCCCcHHHHHHHHHHHHHHhhccH---HHHHHHHH
Q 010250          345 -AYMPIGAILVSPEVSEVIHSQ-----SN-------TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNI---VEQVNKIA  408 (514)
Q Consensus       345 -G~~pig~v~~~~~i~~~l~~~-----~~-------~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~---~~~~~~~~  408 (514)
                       |+.++|++++++++++.+...     +.       .........++++++++++++.+.++.+..+.+   .+++.+++
T Consensus       274 ~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~  353 (474)
T 1wyu_B          274 GGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNA  353 (474)
T ss_dssp             TSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             336899999999987766410     00       000000112345788888888888876544444   77788899


Q ss_pred             HHHHhhhhhccCCCceeEEEeeeee--EEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee------CCEEEEeC
Q 010250          409 PKFQDGVKAFSDSPIIGEIRGTGLI--LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------GDNIMMSP  480 (514)
Q Consensus       409 ~~l~~~L~~l~~~~~~~~v~g~g~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------g~~iRi~p  480 (514)
                      +++.+.|+++ ...+..   +.+.+  +.+.+.. .  .        ....+.+.|.++|+.+...      .+.+||++
T Consensus       354 ~~l~~~L~~~-g~~~~~---~~~~~~~~~~~~~~-~--~--------~~~~l~~~L~~~Gi~~~~~~~~~~~~~~lRis~  418 (474)
T 1wyu_B          354 RYLKELLKEK-GYRVPY---DGPSMHEFVAQPPE-G--F--------RALDLAKGLLELGFHPPTVYFPLIVKEALMVEP  418 (474)
T ss_dssp             HHHHHHHHHT-TCBCSS---CSSCCSCEEEBCST-T--C--------CHHHHHHHHHHTTCCCCEESCSTTSTTCEEECC
T ss_pred             HHHHHHHhhc-CcEecC---CCCcceEEEEEcCC-C--C--------CHHHHHHHHHHCCccccccccccccCCEEEEEe
Confidence            9999999875 332211   11111  2333311 0  0        1456888999999986321      35799999


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHH
Q 010250          481 PFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       481 ~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +..+|++++++++++|++++++
T Consensus       419 ~~~~t~e~id~~~~~L~~~~~~  440 (474)
T 1wyu_B          419 TETEAKETLEAFAEAMGALLKK  440 (474)
T ss_dssp             CTTSCHHHHHHHHHHHHHHHTS
T ss_pred             ecCCCHHHHHHHHHHHHHHHHh
Confidence            9888999999999999998865

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=99.88  E-value=1.8e-22  Score=209.65  Aligned_cols=303  Identities=10%  Similarity=0.089  Sum_probs=200.1

Q ss_pred             chHHHHHHHHHHhcCcCCCCeEEEeCChhHHH--HHHHHHHHHHHhhcCCC---------CccEEEEEecCCcccceeee
Q 010250          144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEAN--DTQVKLVWYYNNALGRP---------NKKKFIARQKSYHGSTLIAA  212 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~--~~Alk~a~~~~~~~~~~---------~~~~ii~~~~~yHG~t~~~~  212 (514)
                      ....+|.+.|++++. ...++|++++|+++|+  +.+++....     +.+         .+++|++.+++|++......
T Consensus        78 ~g~~~lr~~ia~~~~-~~~~~i~~t~G~~~al~~~~~~~~l~~-----~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~  151 (427)
T 3ppl_A           78 DGIVDIRQIWADLLG-VPVEQVLAGDASSLNIMFDVISWSYIF-----GNNDSVQPWSKEETVKWICPVPGYDRHFSITE  151 (427)
T ss_dssp             SCCHHHHHHHHHHHT-SCGGGEEECSSCHHHHHHHHHHHHHHH-----CCTTCSSCGGGSSCCEEEEEESCCHHHHHHHH
T ss_pred             CCcHHHHHHHHHHhC-CCcceEEEeCCcHHHHHHHHHHHHHhc-----cCCcccccccCCCCCEEEEcCCCcHHHHHHHH
Confidence            345788888888874 4567999999999999  577776542     102         15789999999998754333


Q ss_pred             ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCCh
Q 010250          213 SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPA  291 (514)
Q Consensus       213 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~  291 (514)
                      ..+....             .++...           +   ..++++|++.+.   ..++++|++.| .++++|.+.+ .
T Consensus       152 ~~g~~~~-------------~v~~~~-----------~---g~d~~~l~~~l~---~~~~~~v~~~p~~~NPtG~~~~-~  200 (427)
T 3ppl_A          152 RFGFEMI-------------SVPMNE-----------D---GPDMDAVEELVK---NPQVKGMWVVPVFSNPTGFTVT-E  200 (427)
T ss_dssp             HTTCEEE-------------EEEEET-----------T---EECHHHHHHHTT---STTEEEEEECCSSCTTTCCCCC-H
T ss_pred             HcCCEEE-------------EeCCCC-----------C---CCCHHHHHHHHh---cCCCeEEEECCCCCCCCCccCC-H
Confidence            2221110             011100           0   012567777663   24678888886 4667787664 5


Q ss_pred             hHHHHHHHHH-HhcCCEEEEechhcCcccccccc-eec---------ccCCCCchhchhhhhcCCcccceeEEeCHHHHH
Q 010250          292 TYFEKVQAVV-KKYDILFIADEVICAFGRLGTMF-GCD---------KYSIKPDLVSFAKALSSAYMPIGAILVSPEVSE  360 (514)
Q Consensus       292 ~~L~~l~~l~-~~~gillI~DEv~tG~gr~G~~~-~~~---------~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~  360 (514)
                      +.+++|.++| ++||+++|+||+|+++...+... ...         ..+....+.+|||.+..| +++|++++++++++
T Consensus       201 ~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G-~r~G~~~~~~~l~~  279 (427)
T 3ppl_A          201 DVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAG-AGVSFFLTSAENRK  279 (427)
T ss_dssp             HHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTT-SSCEEEECCHHHHH
T ss_pred             HHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcC-ccEEEEEcCHHHHH
Confidence            6699999999 99999999999999853333210 111         223334455899985555 89999999999998


Q ss_pred             HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH---hh--ccHHHHHHHHHHHHHhhhhh-ccCCCcee-EEEeeeee
Q 010250          361 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY---KE--RNIVEQVNKIAPKFQDGVKA-FSDSPIIG-EIRGTGLI  433 (514)
Q Consensus       361 ~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~---~~--~~~~~~~~~~~~~l~~~L~~-l~~~~~~~-~v~g~g~~  433 (514)
                      .+..       .....+++.+++++.++.++++..   .+  ++..+.++++.+.+.+.|.+ +...+.+. .....|.+
T Consensus       280 ~~~~-------~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p~~g~~  352 (427)
T 3ppl_A          280 WYTG-------HAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVPAGGYF  352 (427)
T ss_dssp             HHHH-------HHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCCSBSSC
T ss_pred             HHHH-------HhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCCCccEE
Confidence            8864       233456778888888887777531   11  23455566666666666654 22222121 11224677


Q ss_pred             EEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          434 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----------GDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       434 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +++.+.+..            ...+.+.|.++||.+.++           .+.+||+++.. ++++|++++++|.+++++
T Consensus       353 ~~~~~~~~~------------~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~-~~~~i~~~~~~l~~~l~~  419 (427)
T 3ppl_A          353 ISLDVVPGT------------ASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLP-PVEELEVAMDGVATCVLL  419 (427)
T ss_dssp             EEEECSTTC------------HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSS-CHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCcch------------HHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCC-CHHHHHHHHHHHHHHHHH
Confidence            888875421            445778899999999872           25699998544 999999999999999987


Q ss_pred             HH
Q 010250          503 TE  504 (514)
Q Consensus       503 ~~  504 (514)
                      +.
T Consensus       420 ~~  421 (427)
T 3ppl_A          420 AA  421 (427)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=99.88  E-value=1.5e-22  Score=207.83  Aligned_cols=343  Identities=15%  Similarity=0.116  Sum_probs=192.4

Q ss_pred             EEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc----cccccccCCchHHHHHHHHHHhcCcCCCCeEEEe
Q 010250           93 YVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF----YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFT  168 (514)
Q Consensus        93 ~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~----~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~  168 (514)
                      +.++.++..|||+.++      +..+|++++++.+++.+...    .+.......+...+++++++++++. +.++++++
T Consensus        14 ~~~~~~~~iyld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~~~~v~~~   86 (400)
T 3vax_A           14 LVPRGSHMTYLDAAAT------TRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSA-EPDELIFT   86 (400)
T ss_dssp             --------CCCCCCCC------SSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTC-CGGGEEEE
T ss_pred             CCcccCCcEEecCCCC------CCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCC-CCCcEEEe
Confidence            3455677889998665      24689999999999864210    0110011234567888999998743 45789999


Q ss_pred             CChhHHHHHHHHHHHHHHhhcCCCCcc-EEEEEecCCcccceeeeec--CCCccccCCCCCCCCcccccCCCCcccCCCC
Q 010250          169 NSGSEANDTQVKLVWYYNNALGRPNKK-KFIARQKSYHGSTLIAASL--SGLPALHQKFDLPAPFVLHTDCPHYWRYAHP  245 (514)
Q Consensus       169 ~sGseA~~~Alk~a~~~~~~~~~~~~~-~ii~~~~~yHG~t~~~~~~--s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (514)
                      +||++|++.+++.+..+...    +++ .||+.+..|++.......+  .|..            +..++....+.    
T Consensus        87 ~g~t~al~~~~~~l~~~~~~----~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~----  146 (400)
T 3vax_A           87 SGATESNNIALLGLAPYGER----TGRRHIITSAIEHKAVLEPLEHLAGRGFE------------VDFLTPGPSGR----  146 (400)
T ss_dssp             SCHHHHHHHHHHTTHHHHHH----HTCCEEEEETTSCHHHHHHHHHHHTTTCE------------EEEECCCTTCC----
T ss_pred             CCHHHHHHHHHHHHHHhhcc----CCCCEEEECccccHhHHHHHHHHHhcCCe------------EEEEccCCCCC----
Confidence            99999999999977432211    234 7888777776643222111  1211            11112111111    


Q ss_pred             CCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce
Q 010250          246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG  325 (514)
Q Consensus       246 ~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~  325 (514)
                               .++++|++.+.    +++++|+++++++++|.+.+    +++|.++|++||+++|+||+|+ +|...    
T Consensus       147 ---------~d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~-~~~~~----  204 (400)
T 3vax_A          147 ---------ISVEGVMERLR----PDTLLVSLMHVNNETGVIQP----VAELAQQLRATPTYLHVDAAQG-YGKVP----  204 (400)
T ss_dssp             ---------CCHHHHHTTCC----TTEEEEECCSBCTTTCBBCC----HHHHHHHHTTSSCEEEEECTTT-TTTSG----
T ss_pred             ---------cCHHHHHHhcC----CCceEEEEECCCCCceeeCc----HHHHHHHHHhcCCEEEEEhhhh-cCCCC----
Confidence                     01466666553    46889999999999998887    8999999999999999999997 43321    


Q ss_pred             ecccCCCCchhch--hhhhcCCcccceeEE-eCHH-HH---HHhhhccCCCCccc-ccCCCCCcHHHHHHHHHHHHHHhh
Q 010250          326 CDKYSIKPDLVSF--AKALSSAYMPIGAIL-VSPE-VS---EVIHSQSNTLGSFS-HGFTYSGHPVSCAVAIEALKIYKE  397 (514)
Q Consensus       326 ~~~~gv~pDiv~~--sK~l~gG~~pig~v~-~~~~-i~---~~l~~~~~~~~~~~-~~~t~~~~pl~~aaa~aal~~~~~  397 (514)
                      .+..+. +|++++  +| +.|+ .++|+++ ++++ +.   ..+.+.... +... .......++.++++..++++.+.+
T Consensus       205 ~~~~~~-~d~~~~s~~K-~~g~-~g~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~~~al~~~~~  280 (400)
T 3vax_A          205 GDLTTP-IDMISISGHK-IGAP-KGVGALVTRRREEMDDERVPLEPIMFG-GGQERKLRPGTLPVPLIMGLAEAAKIFEA  280 (400)
T ss_dssp             GGGGSC-CSEEEEETGG-GTSC-SSCEEEEECBCSSSTTCBCCCCCSSCS-SCTGGGTSCSCCCHHHHHHHHHHHHHHHH
T ss_pred             cChhhc-CcEEEEeHHH-hCCC-CceEEEEEecchhccccccccCceecC-CCceeeeecCCCCHHHHHHHHHHHHHHHh
Confidence            222233 788765  59 4443 4688888 7762 21   111110000 0000 112334567777777788887654


Q ss_pred             --ccHHHHHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--
Q 010250          398 --RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--  472 (514)
Q Consensus       398 --~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--  472 (514)
                        +++.++.+++++++.+.|+ +....+.... ...+.++.+.+...            ....+.+.|. +||.++++  
T Consensus       281 ~~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~l~~~L~-~gi~v~~g~~  346 (400)
T 3vax_A          281 EHAQWQVAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHILNLSFEDV------------DAEAFLVTLK-DLVAVATGSA  346 (400)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEEEEECTTC------------CHHHHHHHHH-HHHHHTTTTE
T ss_pred             hHHHHHHHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeCCC------------CHHHHHHHHh-cCcEEEeccc
Confidence              4677888888899988887 4222111110 11234555655421            1456778888 88877642  


Q ss_pred             ----------------------CCEEEEeC-CCCCCHHHHHHHHHHHHHHHHH
Q 010250          473 ----------------------GDNIMMSP-PFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       473 ----------------------g~~iRi~p-~~~~t~e~id~~~~~l~~~l~~  502 (514)
                                            .+.|||++ +...|++++++++++|++++++
T Consensus       347 ~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~  399 (400)
T 3vax_A          347 STSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS  399 (400)
T ss_dssp             EEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred             ccCCCCCccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence                                  26799999 8889999999999999988753

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.88  E-value=6.9e-21  Score=196.00  Aligned_cols=283  Identities=11%  Similarity=0.044  Sum_probs=187.8

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee---ecCCCc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLP  218 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~---~~s~~~  218 (514)
                      ..+...+++++++++++   .+++++++||++|+..+++.+.        .++++|++.++.||+......   ...+..
T Consensus        63 ~~~~~~~l~~~la~~~g---~~~~i~~~sG~~a~~~~l~~~~--------~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~  131 (398)
T 1gc0_A           63 SNPTLNLLEARMASLEG---GEAGLALASGMGAITSTLWTLL--------RPGDEVLLGNTLYGCTFAFLHHGIGEFGVK  131 (398)
T ss_dssp             CCHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHHHHC--------CTTCEEEEESSCCSHHHHHHHHTGGGGTCE
T ss_pred             CChHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------cCCCEEEEeCCCchhHHHHHHHHHHHcCCE
Confidence            45667889999999874   3478899999999999998773        335689999999988643221   111111


Q ss_pred             cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ  298 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~  298 (514)
                                  +..++..                  +.+++++.+.    +++++|++|++++++|.+.+    +++|+
T Consensus       132 ------------~~~~~~~------------------d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----l~~i~  173 (398)
T 1gc0_A          132 ------------LRHVDMA------------------DLQALEAAMT----PATRVIYFESPANPNMHMAD----IAGVA  173 (398)
T ss_dssp             ------------EEEECTT------------------CHHHHHHHCC----TTEEEEEEESSCTTTCCCCC----HHHHH
T ss_pred             ------------EEEECCC------------------CHHHHHHhcC----CCCeEEEEECCCCCCccccc----HHHHH
Confidence                        1111110                  1466766664    46899999999999998886    99999


Q ss_pred             HHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccc-eeEEeCHHHHH-HhhhccCCCCccccc-
Q 010250          299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPI-GAILVSPEVSE-VIHSQSNTLGSFSHG-  375 (514)
Q Consensus       299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pi-g~v~~~~~i~~-~l~~~~~~~~~~~~~-  375 (514)
                      ++|++||+++|+||+|+.+ ..+...   .++....+.+++|.+++++.|+ |++++++++++ .+..       ..++ 
T Consensus       174 ~l~~~~~~~li~D~~~~~~-~~~~~~---~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~-------~~~~~  242 (398)
T 1gc0_A          174 KIARKHGATVVVDNTYCTP-YLQRPL---ELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQ-------GLKDM  242 (398)
T ss_dssp             HHHGGGTCEEEEECTTTHH-HHCCGG---GGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHT-------HHHHH
T ss_pred             HHHHHcCCEEEEECCCccc-ccCCch---hhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHH-------Hhhcc
Confidence            9999999999999999833 333221   2343333447889999866787 88888988765 4442       2233 


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CC---------cee-EEEeeeeeEEEEEcc
Q 010250          376 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SP---------IIG-EIRGTGLILGTEFAD  440 (514)
Q Consensus       376 ~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~---------~~~-~v~g~g~~~~i~~~~  440 (514)
                      .+...+|++++++.++++.+.  ...++..++.+.+.+.|+++..     ++         +.. ..++.|.++.+.+..
T Consensus       243 ~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~  320 (398)
T 1gc0_A          243 TGAVLSPHDAALLMRGIKTLN--LRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG  320 (398)
T ss_dssp             TCCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT
T ss_pred             CCCCCCHHHHHHHHhccchHH--HHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC
Confidence            345678999888888887543  2344555556666666654310     01         000 013567788887752


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHCCcEEEe---e----------------------------CCEEEEeCCCCCCHHHH
Q 010250          441 NKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV---S----------------------------GDNIMMSPPFIMSPEEV  489 (514)
Q Consensus       441 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~---~----------------------------g~~iRi~p~~~~t~e~i  489 (514)
                      .             .......+.+.|+....   +                            .+.|||++++..++++|
T Consensus       321 ~-------------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i  387 (398)
T 1gc0_A          321 G-------------IGAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLL  387 (398)
T ss_dssp             H-------------HHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHH
T ss_pred             C-------------HHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHH
Confidence            1             12344566677776643   1                            25799999999999999


Q ss_pred             HHHHHHHHHH
Q 010250          490 DELISKYGKA  499 (514)
Q Consensus       490 d~~~~~l~~~  499 (514)
                      +.+.++|+++
T Consensus       388 ~~l~~al~~~  397 (398)
T 1gc0_A          388 ADVQQALKAS  397 (398)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhc
Confidence            9998888764

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=99.88  E-value=1.3e-21  Score=207.36  Aligned_cols=334  Identities=14%  Similarity=0.086  Sum_probs=206.3

Q ss_pred             CCCHHHHHHHHHHHhcCCccccc----cccCCchHHHHHHHHHHhcCcC-CCCeEEEeCChhHHHHHHHHHHHHHHhhcC
Q 010250          116 GSEPRLVAAATAQLNTLPFYHSF----WNRTTKPSLDLAKELLEMFTAS-KMAKVFFTNSGSEANDTQVKLVWYYNNALG  190 (514)
Q Consensus       116 h~~p~v~~A~~~~l~~~~~~~~~----~~~~~~~~~ela~~L~~~~~~~-~~~~v~~~~sGseA~~~Alk~a~~~~~~~~  190 (514)
                      ++++.+.+++.+++......+.+    +.+......+++++++++++.. +.+.+++++||++|+..+++.++.+.....
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~  154 (497)
T 3mc6_A           75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR  154 (497)
T ss_dssp             CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence            35689999999988764322111    1112344456777788887533 356899999999999999999876533211


Q ss_pred             CCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250          191 RPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLANNLEDLILKEGP  269 (514)
Q Consensus       191 ~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~li~~~~~  269 (514)
                      ...+++|++..++|.. ...+....|...            ..+++.. .++.             ++++|++++.    
T Consensus       155 g~~~~~Vi~~~~~h~~-~~~~~~~~G~~~------------~~v~~~~~~~~~-------------d~~~l~~~i~----  204 (497)
T 3mc6_A          155 GITEPEIIAPVTAHAG-FDKAAYYFGMKL------------RHVELDPTTYQV-------------DLGKVKKFIN----  204 (497)
T ss_dssp             CCSSCEEEEETTSCHH-HHHHHHHSCCEE------------EEECBCTTTCSB-------------CTTTTGGGCC----
T ss_pred             CCCCceEEEeCCccHH-HHHHHHHcCCeE------------EEEecCcccCcC-------------CHHHHHHHHh----
Confidence            1123567776665544 333333333211            1112111 1111             1245555553    


Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc-----c--c--cceecccCCCCchhc--h
Q 010250          270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL-----G--T--MFGCDKYSIKPDLVS--F  338 (514)
Q Consensus       270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~-----G--~--~~~~~~~gv~pDiv~--~  338 (514)
                      +++++|+++..++.+|.+.+    +++|+++|++||++||+||+|+|+.+.     |  .  .+.....|+  |+++  +
T Consensus       205 ~~~~~v~~~~p~nptG~~~~----l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~--d~~~~s~  278 (497)
T 3mc6_A          205 KNTVLLVGSAPNFPHGIADD----IEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGV--TSISCDT  278 (497)
T ss_dssp             SSEEEEEEETTCTTTCCCCS----CTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTC--CEEEEET
T ss_pred             hCCEEEEEECCCCCCCcCCC----HHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCC--cEEEECc
Confidence            46889999999988998876    899999999999999999999876442     1  1  122233343  6665  4


Q ss_pred             hhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccC-----CC--CCcHHHHHHHHHHHHHHhh---ccHHHHHHHHH
Q 010250          339 AKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGF-----TY--SGHPVSCAVAIEALKIYKE---RNIVEQVNKIA  408 (514)
Q Consensus       339 sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~-----t~--~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~  408 (514)
                      .|.+.+| .++|+++++++.+.......   .....++     ++  +.+....++..++++.+.+   +++.+++.++.
T Consensus       279 ~K~l~~~-~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~  354 (497)
T 3mc6_A          279 HKYGFAP-KGSSVIMYRNSDLRMHQYYV---NPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAA  354 (497)
T ss_dssp             TTTTCCC-SSCEEEECSSHHHHTTTSCC---BTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhcCCC-CCceeEEecCHHHHhhhhcc---cccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence            5887666 78999999877655432110   0001111     11  1122233444455555544   34567788888


Q ss_pred             HHHHhhhhh-ccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--CEEEEeCCCCCC
Q 010250          409 PKFQDGVKA-FSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMS  485 (514)
Q Consensus       409 ~~l~~~L~~-l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--~~iRi~p~~~~t  485 (514)
                      +++++.|++ +.+..++..  ..+.++.+.....            ....+.+.|.++||.+....  ..+|++++ .+|
T Consensus       355 ~~l~~~L~~~~~g~~~~~~--~~~~~v~~~~~~~------------~~~~l~~~L~~~Gi~v~~~~~~~~~ri~~~-~~t  419 (497)
T 3mc6_A          355 MKFKKYIQENIPDLDIMGN--PRYSVISFSSKTL------------NIHELSDRLSKKGWHFNALQKPVALHMAFT-RLS  419 (497)
T ss_dssp             HHHHHHHHHSCTTCEECSC--CCSSEEEEECTTT------------THHHHHHHHHTTTCBCEECCSSCCEEEECC-TTT
T ss_pred             HHHHHHHHhcCCCEEEecC--CCeeEEEEeCCCC------------CHHHHHHHHHhCCEEEecCCCCCeEEEEEe-CCC
Confidence            999999987 433322221  3344555543211            14568899999999887643  45899988 789


Q ss_pred             HHHHHHHHHHHHHHHHHHH
Q 010250          486 PEEVDELISKYGKALKATE  504 (514)
Q Consensus       486 ~e~id~~~~~l~~~l~~~~  504 (514)
                      ++++++++++|+++++++.
T Consensus       420 ~e~i~~~~~~L~~~l~~~~  438 (497)
T 3mc6_A          420 AHVVDEICDILRTTVQELK  438 (497)
T ss_dssp             TCTHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            9999999999999998764

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.87  E-value=4.8e-21  Score=196.76  Aligned_cols=281  Identities=13%  Similarity=0.106  Sum_probs=185.4

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH  221 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~  221 (514)
                      ..+...+++++|+++++   .+++++++||++|++.+++.+.        ..+++||+.++.||+.........      
T Consensus        64 ~~~~~~~l~~~la~~~g---~~~~~~~~sGt~A~~~al~~~~--------~~gd~Vi~~~~~y~~~~~~~~~~~------  126 (392)
T 3qhx_A           64 GNPTRTALEAALAAVED---AAFGRAFSSGMAAADCALRAML--------RPGDHVVIPDDAYGGTFRLIDKVF------  126 (392)
T ss_dssp             CCHHHHHHHHHHHHHTT---CSEEEEESSHHHHHHHHHHHHC--------CTTCEEEEETTCCHHHHHHHHHTG------
T ss_pred             CChHHHHHHHHHHHHhC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEeCCCcchHHHHHHHHH------
Confidence            45567789999999873   4589999999999999999763        345789999999987532211000      


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                      ..++   ..+..++..                  +++++++.+.    +++++|++|++++++|.+.+    +++|+++|
T Consensus       127 ~~~g---~~~~~v~~~------------------d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----l~~i~~la  177 (392)
T 3qhx_A          127 TGWN---VEYTPVALA------------------DLDAVRAAIR----PTTRLIWVETPTNPLLSIAD----IAGIAQLG  177 (392)
T ss_dssp             GGGT---CEEEEECTT------------------CHHHHHHHCC----TTEEEEEEESSCTTTCCCCC----HHHHHHHH
T ss_pred             HhcC---cEEEEeCCC------------------CHHHHHHhhC----CCCeEEEEECCCCCCcEEec----HHHHHHHH
Confidence            0001   001111111                  1466776664    47899999999999999877    99999999


Q ss_pred             HhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCc-ccceeEEeC-HHHHHHhhhccCCCCcccccCC
Q 010250          302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAY-MPIGAILVS-PEVSEVIHSQSNTLGSFSHGFT  377 (514)
Q Consensus       302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~-~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t  377 (514)
                      ++||+++|+||+|+.+ .     .....+..+|+++  ++|.+++++ .++|+++++ +++++.+..       ..+..+
T Consensus       178 ~~~g~~li~D~~~~~~-~-----~~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~-------~~~~~g  244 (392)
T 3qhx_A          178 ADSSAKVLVDNTFASP-A-----LQQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAF-------LQNGAG  244 (392)
T ss_dssp             HHHTCEEEEECTTTCT-T-----TCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHH-------HHHHHC
T ss_pred             HHcCCEEEEECCCccc-c-----cCChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHH-------HHHhcC
Confidence            9999999999999732 1     2233345678886  889999854 578888887 688877763       233456


Q ss_pred             CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEE------------------EeeeeeEEEEEc
Q 010250          378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI------------------RGTGLILGTEFA  439 (514)
Q Consensus       378 ~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v------------------~g~g~~~~i~~~  439 (514)
                      +..+|+.+++++..++.+..  ..++..++.+.+.+.|++.   +.+..+                  +|.|.++++++.
T Consensus       245 ~~~~~~~~~~~~~~l~~l~~--~~~~~~~~~~~l~~~L~~~---~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~  319 (392)
T 3qhx_A          245 AVPGPFDAYLTMRGLKTLVL--RMQRHSENAAAVAEFLAEH---PAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMR  319 (392)
T ss_dssp             CCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTC---TTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEET
T ss_pred             CCCCHHHHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHhcC---CCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeC
Confidence            77789998888887775532  2455666666676666653   222222                  567889999996


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------------------------CCEEEEeCCCCCCHHHHHHHHH
Q 010250          440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------------------------GDNIMMSPPFIMSPEEVDELIS  494 (514)
Q Consensus       440 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------------------------g~~iRi~p~~~~t~e~id~~~~  494 (514)
                      ...          ..+..+...|...|+.+..+                         .+.|||+.....++++|+.+.+
T Consensus       320 ~~~----------~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~~~i~~l~~  389 (392)
T 3qhx_A          320 AGR----------TAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIEDVADLLDDLKQ  389 (392)
T ss_dssp             TCH----------HHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCSSCHHHHHHHHHH
T ss_pred             CcH----------HHHHHHHHhCCCceECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEeccCCHHHHHHHHHH
Confidence            421          02444555555444433211                         2458998666555555555544


Q ss_pred             HH
Q 010250          495 KY  496 (514)
Q Consensus       495 ~l  496 (514)
                      +|
T Consensus       390 al  391 (392)
T 3qhx_A          390 AL  391 (392)
T ss_dssp             HH
T ss_pred             Hh
Confidence            43

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=99.87  E-value=2.2e-20  Score=188.09  Aligned_cols=331  Identities=14%  Similarity=0.080  Sum_probs=204.9

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV  179 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al  179 (514)
                      .++|||.++..   .. .+|++++++.+..... .   . .++.+...+++++|+++++   .+.+++++||++|+..++
T Consensus         3 ~~~i~~~~~~~---~~-p~~~~~~a~~~~~~~~-~---~-y~~~~~~~~l~~~la~~~g---~~~~~~~~~gt~a~~~~~   70 (347)
T 1jg8_A            3 HMMIDLRSDTV---TK-PTEEMRKAMAQAEVGD-D---V-YGEDPTINELERLAAETFG---KEAALFVPSGTMGNQVSI   70 (347)
T ss_dssp             --CEECSCGGG---CC-CCHHHHHHHHTCCCCC-G---G-GTCCHHHHHHHHHHHHHHT---CSEEEEESCHHHHHHHHH
T ss_pred             ceEEEeccccC---CC-CCHHHHHHHhcCCCCC-c---c-cCCChHHHHHHHHHHHHhC---CceEEEecCcHHHHHHHH
Confidence            45789888743   33 5688888886543211 1   1 1234556789999999873   468899999999999998


Q ss_pred             HHHHHHHhhcCCCCccEEEEEecCCcccce-e-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          180 KLVWYYNNALGRPNKKKFIARQKSYHGSTL-I-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~-~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      +...        ..+++|++.+++|..... . .....|....            .+ .+..+.             .++
T Consensus        71 ~~~~--------~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~------------~v-~~~~~~-------------~d~  116 (347)
T 1jg8_A           71 MAHT--------QRGDEVILEADSHIFWYEVGAMAVLSGVMPH------------PV-PGKNGA-------------MDP  116 (347)
T ss_dssp             HHHC--------CTTCEEEEETTCHHHHSSTTHHHHHTCCEEE------------EE-CEETTE-------------ECH
T ss_pred             HHhc--------CCCCEEEEcCcchhhhccccchhhccCeEEE------------Ee-cCCCCc-------------cCH
Confidence            7653        234678887777643211 0 1111121110            01 000000             014


Q ss_pred             HHHHHHHHHhC--CCcEEEEEEccccCCC-CcccCChhHHHHHHHHHHhcCCEEEEechhcCccc---ccccceecccCC
Q 010250          258 NNLEDLILKEG--PETIAAFIAEPVIGAG-GVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR---LGTMFGCDKYSI  331 (514)
Q Consensus       258 ~~le~li~~~~--~~~~aavivEpv~~~~-G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr---~G~~~~~~~~gv  331 (514)
                      ++|++.+....  .+++++|+++++++++ |.+. +.+.+++|.++|++||+++|+||+|. ++.   .|.  ....+..
T Consensus       117 ~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~-~~~~l~~i~~~a~~~~~~li~D~a~~-~~~~~~~~~--~~~~~~~  192 (347)
T 1jg8_A          117 DDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVV-PLENIKEICTIAKEHGINVHIDGARI-FNASIASGV--PVKEYAG  192 (347)
T ss_dssp             HHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCC-CHHHHHHHHHHHHHHTCEEEEEETTH-HHHHHHHCC--CHHHHHH
T ss_pred             HHHHHHhccccccccCceEEEEeccccccCCccC-cHHHHHHHHHHHHHCCCEEEeehhhh-hcchhhcCC--ChHHhcc
Confidence            67777664210  1257889999888877 7554 56789999999999999999999875 321   121  1111111


Q ss_pred             CCch--hchhhhhcCCccccee-EEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHH
Q 010250          332 KPDL--VSFAKALSSAYMPIGA-ILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIA  408 (514)
Q Consensus       332 ~pDi--v~~sK~l~gG~~pig~-v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~  408 (514)
                      ..|.  ++++|++++   |+|+ +++++++++.+....    . ..++++..+++.++++..+++... +. .++..++.
T Consensus       193 ~~d~~~~s~sK~l~~---~~G~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~l~~~~-~~-~~~~~~~~  262 (347)
T 1jg8_A          193 YADSVMFCLSKGLCA---PVGSVVVGDRDFIERARKAR----K-MLGGGMRQAGVLAAAGIIALTKMV-DR-LKEDHENA  262 (347)
T ss_dssp             TCSEEEEESSSTTCC---SSCEEEEECHHHHHHHHHHH----H-HHTCCCSSTHHHHHHHHHHHHHSS-TT-HHHHHHHH
T ss_pred             cccEEEEecccccCC---CceEEEEcCHHHHHHHHHHH----H-HcCCchhHHHHHHHHHHHHHHHHH-HH-HHHHHHHH
Confidence            2343  368999975   4674 567888877664310    1 223444556677777777776532 22 34445567


Q ss_pred             HHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHH
Q 010250          409 PKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPE  487 (514)
Q Consensus       409 ~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e  487 (514)
                      +++.+.|+++ ...+.. ....|.++.+.+.....          ....+.+.|.++||.+.+.+ +.+|++++..+|++
T Consensus       263 ~~l~~~L~~~-~~~~~~-~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~gi~v~~~~~~~iRl~~~~~~~~e  330 (347)
T 1jg8_A          263 RFLALKLKEI-GYSVNP-EDVKTNMVILRTDNLKV----------NAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRN  330 (347)
T ss_dssp             HHHHHHHHHH-TCBCCG-GGCCSSEEEEECTTSSS----------CHHHHHHHHHHHTEECEEEETTEEEEECCTTSCHH
T ss_pred             HHHHHHHHhc-Cceecc-CCCcceEEEEEcccccC----------CHHHHHHHHHHCCCEEecCCCCeEEEEeCCCCCHH
Confidence            8888888776 322111 12245566777642110          14568888999999998764 57999998889999


Q ss_pred             HHHHHHHHHHHHHHH
Q 010250          488 EVDELISKYGKALKA  502 (514)
Q Consensus       488 ~id~~~~~l~~~l~~  502 (514)
                      |+++++++|++++++
T Consensus       331 ~i~~~~~~l~~~l~~  345 (347)
T 1jg8_A          331 DIEEALNIFEKLFRK  345 (347)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999988764

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=99.87  E-value=4.4e-22  Score=212.50  Aligned_cols=370  Identities=14%  Similarity=0.046  Sum_probs=206.7

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC----cCCCCeEEEeCChhHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT----ASKMAKVFFTNSGSEA  174 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~----~~~~~~v~~~~sGseA  174 (514)
                      |.+|++...+++....++.+|++++++.+++....++.. ..+..+....+++.+.+.+.    ..+.+++++++||++|
T Consensus        98 g~~~~~~~i~l~~g~~~~~~~~~v~a~~~~~~~~~y~~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~a  176 (533)
T 3f6t_A           98 EDKFLIDAVNYCHTELGLNRDKVVAEWVNGAVANNYPVP-DRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAA  176 (533)
T ss_dssp             HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTCSCCSS-SSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHH
T ss_pred             cccccHhheeccCCCCCcCCcHHHHHHHHHHHhCCCCCC-cccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHH
Confidence            444444444444456667789999999888865322211 12234455556666644411    1123689999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC----CcccCCCCCCChh
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP----HYWRYAHPGETEE  250 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~  250 (514)
                      +..+++......  .. ..+++|++.+++|++........+....             .++++    +.|.         
T Consensus       177 l~~~~~~l~~~~--l~-~~gd~Viv~~p~~~~~~~~~~~~g~~~~-------------~v~~~~~~~~~~~---------  231 (533)
T 3f6t_A          177 IVYAFHSLAENH--LL-KKGDKIAINEPIFTPYLRIPELKDYELV-------------EVDLHSYEKNDWE---------  231 (533)
T ss_dssp             HHHHHHHHHHTT--SS-CTTCEEEEESSCCHHHHTSGGGGGSEEE-------------EECCCEETTTTSE---------
T ss_pred             HHHHHHHhhhhh--cc-CCcCEEEEcCCCcHHHHHHHHHcCCeEE-------------EEEecCCcccCCC---------
Confidence            999998632110  01 2346899999999886543322211110             11110    0011         


Q ss_pred             HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH-hcCCEEEEechhcCcccccccceeccc
Q 010250          251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK-KYDILFIADEVICAFGRLGTMFGCDKY  329 (514)
Q Consensus       251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~-~~gillI~DEv~tG~gr~G~~~~~~~~  329 (514)
                          .+.++|++++.    .++.+|+++..++++|.+. +.+.+++|.++|+ +||+++|+||+|.+|...+........
T Consensus       232 ----~d~~~l~~~l~----~~~k~v~l~~p~NPtG~~~-~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~  302 (533)
T 3f6t_A          232 ----IEPNEIEKLKD----PSIKALIVVNPTNPTSKEF-DTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVP  302 (533)
T ss_dssp             ----ECHHHHHHHSC----TTEEEEEEESSCTTTCBCC-CHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSG
T ss_pred             ----CCHHHHHHHhC----CCCeEEEEeCCCCCCcccc-CHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCC
Confidence                01466776653    3566666655566677655 5678999999999 699999999999988654322211112


Q ss_pred             CCCCchhchhhhhcCCcccceeEEeCHH-----HHHHhhh---------cc---C-------------CCCcccccCCCC
Q 010250          330 SIKPDLVSFAKALSSAYMPIGAILVSPE-----VSEVIHS---------QS---N-------------TLGSFSHGFTYS  379 (514)
Q Consensus       330 gv~pDiv~~sK~l~gG~~pig~v~~~~~-----i~~~l~~---------~~---~-------------~~~~~~~~~t~~  379 (514)
                      +....+.+|||.++..++++|+++++++     +++.+.+         .+   .             .........+.+
T Consensus       303 ~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~  382 (533)
T 3f6t_A          303 YNTMLVYSYSKLFGCTGWRLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAG  382 (533)
T ss_dssp             GGEEEEEESHHHHTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCS
T ss_pred             CCEEEEecCcccCCCcccceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccC
Confidence            2223455899998743389999999776     4332200         00   0             000112223445


Q ss_pred             CcHHHHHH-HHHHHHHHh-----------hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCC--C
Q 010250          380 GHPVSCAV-AIEALKIYK-----------ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSP--N  445 (514)
Q Consensus       380 ~~pl~~aa-a~aal~~~~-----------~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~--~  445 (514)
                      .++.++++ ++.++..+.           .+.+.+.++++.+.+.+.|. +   ++......-|.+..+.+......  .
T Consensus       383 ~~~~~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~---~~~~~~~~~g~~~~~~l~~~~~~~~g  458 (533)
T 3f6t_A          383 LSTPQQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-A---PKDETDTNTHYYSLIDIYRLAEKIYG  458 (533)
T ss_dssp             CCHHHHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-C---CCCCSTTBCCSEEEEEHHHHHHHHHC
T ss_pred             CChHHHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-C---CccccCCCceEEEEEehHhhhhhccc
Confidence            55555554 222333332           12346667777778888775 4   21111122345555655420000  0


Q ss_pred             CCCC----CccchHHHHHHHHHHCCcEEEee------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 010250          446 EPFP----PEWGIGAYFGAQCEKHGMLVRVS------GDNIMMSPPFIMSPEEVDELISKYGKALKATEERVK  508 (514)
Q Consensus       446 ~~~~----~~~~~~~~~~~~l~~~Gv~~~~~------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~~  508 (514)
                      ..+.    ......+.+...+.++||++.++      .+.|||+. ..+++++|++++++|.++++++.++.+
T Consensus       459 ~~~~~~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~-a~~~~e~i~~~i~~L~~~l~~~~~~~~  530 (533)
T 3f6t_A          459 KEFRDYLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQ-ANLPTEDYALIGKQVLELLKEYYEEFK  530 (533)
T ss_dssp             HHHHHHHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEES-SSSCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             hHHHHHhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEE-eeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            0000    00001222334445789998763      35799995 236999999999999999988766543

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.87  E-value=1.7e-20  Score=194.06  Aligned_cols=330  Identities=15%  Similarity=0.110  Sum_probs=190.6

Q ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHh-cCCccc---ccccc--CCchHHHHH-HHHHHhcCcCCCCeE-EEeCChhH
Q 010250          102 YLDSLAGLWCTALGGSEPRLVAAATAQLN-TLPFYH---SFWNR--TTKPSLDLA-KELLEMFTASKMAKV-FFTNSGSE  173 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~-~~~~~~---~~~~~--~~~~~~ela-~~L~~~~~~~~~~~v-~~~~sGse  173 (514)
                      .+++.++   .+.  .+|+|++|+.+++. .....+   .++.+  ..+...+++ +++++.+   +.+.+ ++++||++
T Consensus        34 ~i~l~~~---~~~--~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~---~~~~~~v~~~~Gs~  105 (425)
T 3ecd_A           34 QVELIAS---ENI--VSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLF---NAGHANVQPHSGAQ  105 (425)
T ss_dssp             SEECCTT---CCC--CCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHH---TCSEEECCCSSHHH
T ss_pred             ceeeecc---cCC--CCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHh---CCCCceeecCchHH
Confidence            4666555   222  39999999999884 322111   11111  123456666 6666766   34455 45999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCccc-ceeeee-cCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChh
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGS-TLIAAS-LSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEE  250 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~-t~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  250 (514)
                      |++.+++.+.        .++++|++.+++|++. ..+... ..+... .         ...++.. +.+.         
T Consensus       106 a~~~al~~~~--------~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~-~---------~~~~~~~~~~~~---------  158 (425)
T 3ecd_A          106 ANGAVMLALA--------KPGDTVLGMSLDAGGHLTHGAKPALSGKWF-N---------ALQYGVSRDTML---------  158 (425)
T ss_dssp             HHHHHHHHHC--------CTTCEEEEECC------------------C-E---------EEEECCCTTTSS---------
T ss_pred             HHHHHHHHcc--------CCCCEEEEcccccccceecchhhhhcccce-e---------eeecCCCcccCc---------
Confidence            9999998773        3457899999999883 222211 111100 0         0001110 0011         


Q ss_pred             HHHHHHHHHHHHHHHHhCCCcEEEEEEc-cccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-Ccccccccceecc
Q 010250          251 EYSTRLANNLEDLILKEGPETIAAFIAE-PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDK  328 (514)
Q Consensus       251 ~~~~~~~~~le~li~~~~~~~~aavivE-pv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~  328 (514)
                          .++++|++++.+.   ++++|+++ |.++   ..    ..+++|+++|++||+++|+||+|. |+.+.|...... 
T Consensus       159 ----~d~~~l~~~i~~~---~~~~v~~~~~~~~---~~----~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~-  223 (425)
T 3ecd_A          159 ----IDYDQVEALAQQH---KPSLIIAGFSAYP---RK----LDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPV-  223 (425)
T ss_dssp             ----CCHHHHHHHHHHH---CCSEEEEECSCCC---SC----CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGG-
T ss_pred             ----cCHHHHHHHHhhc---CCcEEEEccccCC---Cc----CCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCch-
Confidence                1257888887643   34566666 5543   23    338999999999999999999964 554444432211 


Q ss_pred             cCCCCchh--chhhhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH-Hhh--ccHHH
Q 010250          329 YSIKPDLV--SFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI-YKE--RNIVE  402 (514)
Q Consensus       329 ~gv~pDiv--~~sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~-~~~--~~~~~  402 (514)
                       . .+|++  +++|+++|  .++|+++++ +++.+.+...      ..++.+.+.++..++++.+++.. +++  +++.+
T Consensus       224 -~-~~di~~~s~sK~l~g--~~~g~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~  293 (425)
T 3ecd_A          224 -E-HAHVVTSTTHKTLRG--PRGGFVLTNDEEIAKKINSA------VFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYID  293 (425)
T ss_dssp             -G-TCSEEEEESSGGGCC--CSCEEEEESCHHHHHHHHHH------HC-----CCCHHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred             -h-cCcEEEecCCcccCC--CCcEEEEeCCHHHHHHHHhh------hCccccCCccHHHHHHHHHHHHHHHHHhHHHHHH
Confidence             1 15776  46699965  578999987 5677766531      12222223334333434444433 322  35778


Q ss_pred             HHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE----ee------
Q 010250          403 QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VS------  472 (514)
Q Consensus       403 ~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~------  472 (514)
                      +++++++++++.|++. ...+... .+.+.++.+.+.....          ....+.+.|.++||++.    +.      
T Consensus       294 ~~~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~gi~v~~~~~p~~~~~~~  361 (425)
T 3ecd_A          294 RVLANAQALGDVLKAG-GVDLVTG-GTDNHLLLVDLRPKGL----------KGAQVEQALERAGITCNKNGIPFDPEKPT  361 (425)
T ss_dssp             HHHHHHHHHHHHHHHT-TCEEGGG-SCSSSEEEEECGGGTC----------CHHHHHHHHHHTTEECEECCCTTCSSCTT
T ss_pred             HHHHHHHHHHHHHHhC-CCeeccC-CCCceEEEEEeCCCCC----------CHHHHHHHHHHcCCEecccccCCCCCCCC
Confidence            8899999999999874 2211110 1345667777653221          14557788889999998    32      


Q ss_pred             -CCEEEEeCCCCC----CHHHHHHHHHHHHHHHHHH
Q 010250          473 -GDNIMMSPPFIM----SPEEVDELISKYGKALKAT  503 (514)
Q Consensus       473 -g~~iRi~p~~~~----t~e~id~~~~~l~~~l~~~  503 (514)
                       .+.+|++++...    ++++|++++++|++++++.
T Consensus       362 ~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~  397 (425)
T 3ecd_A          362 ITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL  397 (425)
T ss_dssp             TCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             CccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence             136999976554    4999999999999998765

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=99.86  E-value=1.4e-20  Score=199.45  Aligned_cols=359  Identities=14%  Similarity=0.133  Sum_probs=208.9

Q ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccc---cCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250           97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWN---RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE  173 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~---~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse  173 (514)
                      ..+..|+|+..+      ++.+|.+++++...+-+.. .+. +.   .......++.++|+++++....+.++|++||++
T Consensus        98 ~~~~~yl~~~~~------~~~~~~v~~~~~~~~~n~~-~~~-~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~  169 (497)
T 2qma_A           98 TQHPDCIAHLHT------PPLMPAVAAEAMIAALNQS-MDS-WDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQ  169 (497)
T ss_dssp             TTSTTBCSSSCC------CCBHHHHHHHHHHHHHCCC-TTC-GGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHH
T ss_pred             CCCCCeeEeCCC------CCcHHHHHHHHHHHhhccc-ccc-hhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchH
Confidence            355678887655      4468888888866553321 111 11   012223344556888874332378999999999


Q ss_pred             HHHHHHHHHHHHHh---------hcCCCC--ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccC
Q 010250          174 ANDTQVKLVWYYNN---------ALGRPN--KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRY  242 (514)
Q Consensus       174 A~~~Alk~a~~~~~---------~~~~~~--~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (514)
                      |+..|++.+|.+..         ..|.+.  ++..|+.+...|.+...+....+...         ..+..++....++.
T Consensus       170 a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~---------~~v~~v~~~~~~~~  240 (497)
T 2qma_A          170 SNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGE---------KAVMTVDANADGTM  240 (497)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCG---------GGEEEECBCTTSSB
T ss_pred             HHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCc---------ccEEEEecCCCCcC
Confidence            99999999865422         112111  23244445555655433333322100         01122222211111


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc
Q 010250          243 AHPGETEEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL  320 (514)
Q Consensus       243 ~~~~~~~~~~~~~~~~~le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~  320 (514)
                                   ++++|++.+.+..  ...+.+|++...++.+|.+.|    +++|.++|++||+++|+|++|+|+...
T Consensus       241 -------------d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~----l~~I~~l~~~~~~~l~vD~a~~~~~~~  303 (497)
T 2qma_A          241 -------------DITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDD----LDFIADMAVKHDMWMHVDGAYGGALIL  303 (497)
T ss_dssp             -------------CGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGG
T ss_pred             -------------CHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCC----HHHHHHHHHHcCCEEEEehhhhHHHHh
Confidence                         1466777775431  112457777766777788766    999999999999999999999987655


Q ss_pred             cccceecccCC-CCchhch--hhhhcCCcccceeEEeCHH-HHHHhhhccCCCCccc-ccCCCCCcHHHH----------
Q 010250          321 GTMFGCDKYSI-KPDLVSF--AKALSSAYMPIGAILVSPE-VSEVIHSQSNTLGSFS-HGFTYSGHPVSC----------  385 (514)
Q Consensus       321 G~~~~~~~~gv-~pDiv~~--sK~l~gG~~pig~v~~~~~-i~~~l~~~~~~~~~~~-~~~t~~~~pl~~----------  385 (514)
                      .. +.....++ .+|++++  +|+++++ +++|+++++++ .++.+....    .+. .+.+...++..+          
T Consensus       304 ~~-~~~~~~gi~~~D~i~~s~hK~l~~p-~~~G~l~~~~~~~~~~~~~~~----~yl~~~~~~~~~~~~~~~~~~r~~~a  377 (497)
T 2qma_A          304 SS-HKSRLKGVERAHSISVDFHKLFYQT-ISCGALLVNDKSNFKFLLHHA----DYLNREHDELPNLVDKSIATTKRFDA  377 (497)
T ss_dssp             ST-TGGGGTTGGGCSEEEEETTTTTCCC-SSCEEEEESCGGGGGGGCC------------------------CCSCCCTH
T ss_pred             Cc-chHhhcCcccCCEEEEcchhccCCC-cceEEEEEeCHHHHHHhcCCc----hhcCCccccCCCccccCCCCCCchhH
Confidence            44 33334566 6898876  7999888 69999998754 344432110    111 111111222211          


Q ss_pred             HHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH
Q 010250          386 AVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC  462 (514)
Q Consensus       386 aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l  462 (514)
                      .+..++++.+..   +++.++..++++++.+.|+++....++.  ...+.++.+.+.+...      ........+...|
T Consensus       378 l~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~v~f~~~~~~~------~~~~l~~~l~~~l  449 (497)
T 2qma_A          378 LKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELLA--EPSLSTVLFRATHETA------DLDELNKALRLEA  449 (497)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTEEECS--CCSSSEEEEEECCSSS------CHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEc--CCCceEEEEEEcCCcc------CHHHHHHHHHHHH
Confidence            122334554433   2467788889999999998753222211  2234567777653211      0111244577888


Q ss_pred             HHCCcEEEee----C-CEEEEeC-CCCCCHHHHHHHHHHHHHHHHHH
Q 010250          463 EKHGMLVRVS----G-DNIMMSP-PFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       463 ~~~Gv~~~~~----g-~~iRi~p-~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      .++|+++.+.    + ..+|+++ +..+|++||++++++|+++++++
T Consensus       450 ~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~  496 (497)
T 2qma_A          450 LTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINMLAVEL  496 (497)
T ss_dssp             HHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             HhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHhh
Confidence            8999887642    2 3699997 78899999999999999887653

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.86  E-value=1.3e-21  Score=199.08  Aligned_cols=309  Identities=14%  Similarity=0.144  Sum_probs=194.5

Q ss_pred             HHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEE
Q 010250          121 LVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIAR  200 (514)
Q Consensus       121 v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~  200 (514)
                      +.+++.+.+....+      .+.+...++++.++++++   .+++++++||++|++.+++.+.      . ..+++|++.
T Consensus        21 ~~~~~~~~~~~~~~------~~~~~~~~l~~~la~~~~---~~~~~~~~~gt~a~~~~~~~~~------~-~~gd~v~~~   84 (374)
T 3uwc_A           21 YLNDLREFIKTADF------TLGAELEKFEKRFAALHN---APHAIGVGTGTDALAMSFKMLN------I-GAGDEVITC   84 (374)
T ss_dssp             HHHHHHHHHHHTCC------SSCHHHHHHHHHHHHHTT---CSEEEEESCHHHHHHHHHHHTT------C-CTTCEEEEE
T ss_pred             HHHHHHHHHHcCCc------ccChhHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHcC------C-CCCCEEEEC
Confidence            66666666654321      245667899999999983   4589999999999999998761      1 345789999


Q ss_pred             ecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccc
Q 010250          201 QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPV  280 (514)
Q Consensus       201 ~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv  280 (514)
                      +++||+....... .|...            ..++....+..             +++++++.+.    +++++|+  |.
T Consensus        85 ~~~~~~~~~~~~~-~g~~~------------~~~~~~~~~~~-------------d~~~l~~~~~----~~~~~v~--~~  132 (374)
T 3uwc_A           85 ANTFIASVGAIVQ-AGATP------------VLVDSENGYVI-------------DPEKIEAAIT----DKTKAIM--PV  132 (374)
T ss_dssp             SSSCHHHHHHHHH-TTCEE------------EEECBCTTSSB-------------CGGGTGGGCC----TTEEEEC--CB
T ss_pred             CCccHHHHHHHHH-cCCEE------------EEEecCCCCCc-------------CHHHHHHhCC----CCceEEE--Ee
Confidence            9999887533322 22111            01111111110             1244555443    3566666  44


Q ss_pred             cCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh----hhhcC-CcccceeEEeC
Q 010250          281 IGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSS-AYMPIGAILVS  355 (514)
Q Consensus       281 ~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s----K~l~g-G~~pig~v~~~  355 (514)
                       +.+|.+.+    +++|.++|++||+++|+||+|+.+..    +.....+..+|++++|    |++++ | . .|+++++
T Consensus       133 -n~~G~~~~----~~~i~~~~~~~~~~li~D~~~~~g~~----~~~~~~~~~~d~~~~s~~~~K~l~~~g-~-~g~~~~~  201 (374)
T 3uwc_A          133 -HYTGNIAD----MPALAKIAKKHNLHIVEDACQTILGR----INDKFVGSWGQFACFSLHPLKNLNVWS-D-AGVIITH  201 (374)
T ss_dssp             -CGGGCCCC----HHHHHHHHHHTTCEEEEECTTCTTCE----ETTEETTSSSSEEEEECSSSSSSCCSS-C-CEEEEES
T ss_pred             -CCcCCcCC----HHHHHHHHHHcCCEEEEeCCCccCce----eCCeeccccccEEEEeCCCCCcCCccc-e-eEEEEeC
Confidence             45677665    99999999999999999999983211    2234445557998877    99987 5 2 6777765


Q ss_pred             -HHHHHHhhhccCCCC--cc---cccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-CCceeEEE
Q 010250          356 -PEVSEVIHSQSNTLG--SF---SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-SPIIGEIR  428 (514)
Q Consensus       356 -~~i~~~l~~~~~~~~--~~---~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-~~~~~~v~  428 (514)
                       +++.+.+........  .+   ..+.++..+++.++++...++.+  +++.++.+++.+++++.|+++.. ..+.....
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~  279 (374)
T 3uwc_A          202 SDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMNQL--ETITEKRRGIAHLYDQSFVDLSEFIDVPVRRE  279 (374)
T ss_dssp             CHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGGGH--HHHHHHHHHHHHHHHHHTGGGTTTEECCCCCT
T ss_pred             CHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhccCCCeEEeccCCC
Confidence             466666553211000  01   12334455677777766655544  34678888888999998887632 11111100


Q ss_pred             -eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC----------------------------CEEEEe
Q 010250          429 -GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG----------------------------DNIMMS  479 (514)
Q Consensus       429 -g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g----------------------------~~iRi~  479 (514)
                       +...+..+.+...            ....+.+.|.++||.+++..                            +.||++
T Consensus       280 ~~~~~~~~~~~~~~------------~~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~  347 (374)
T 3uwc_A          280 GVYHVFHIYVLRVK------------YRDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLP  347 (374)
T ss_dssp             TEECCCSSEEEEET------------THHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEEC
T ss_pred             CCceeeEEEEEEcC------------CHHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEcc
Confidence             1111111211111            14568889999999987653                            569999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      ++..+|++||++++++|++++++
T Consensus       348 ~~~~~t~edi~~~~~~l~~~l~~  370 (374)
T 3uwc_A          348 AHPYLTEEEINYIIKKVREFYLE  370 (374)
T ss_dssp             CCTTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHh
Confidence            99999999999999999998864

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.86  E-value=3.3e-21  Score=194.94  Aligned_cols=328  Identities=13%  Similarity=0.089  Sum_probs=199.4

Q ss_pred             CEEEE-ccCCcccccCCC-CCHHHHHHHHHHHhcCC--ccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHH
Q 010250          100 KKYLD-SLAGLWCTALGG-SEPRLVAAATAQLNTLP--FYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAN  175 (514)
Q Consensus       100 ~~ylD-~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~--~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~  175 (514)
                      |+|+| |.++   .+||+ .||.+.+++.++++...  .....+ ++.+...+|+++|+++++   .+..++++||++|+
T Consensus         3 ~~~~~~~~~~---~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~y-~~~~~~~~l~~~la~~~~---~~~~i~~~~G~~a~   75 (357)
T 3lws_A            3 NRLRTSFQQT---TGQISGHGKRNVGVLKTAFAAVADEMASDQY-GTGAIIEPFEQKFADVLG---MDDAVFFPSGTMAQ   75 (357)
T ss_dssp             CHHHHHHHTC---SEESSBSSCCBHHHHHHHHTTSCTTCBCEET-TEETTHHHHHHHHHHHHT---CSEEEEESCHHHHH
T ss_pred             chhhhHHHhh---cccccCCCCCCHHHHHHHHHHhhcccCcccc-cCChHHHHHHHHHHHHhC---CCcEEEecCcHHHH
Confidence            45666 3333   66776 58888888888877632  111222 234567899999999983   35677889999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY  252 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (514)
                      +.+++.+...       +++++|+.++.+|......   ....+...            ..++.+ .+.           
T Consensus        76 ~~al~~~~~~-------gd~~~vi~~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~-~~~-----------  124 (357)
T 3lws_A           76 QVALRIWSDE-------TDNRTVAYHPLCHLEIHEQDGLKELHPIET------------ILVGAA-DRL-----------  124 (357)
T ss_dssp             HHHHHHHHHH-------HTCCEEEECTTCHHHHSSTTHHHHHSSCEE------------EECSCT-TSC-----------
T ss_pred             HHHHHHHhhc-------CCCcEEEecccceeeeeccchhhhccCcEE------------EEecCC-CCC-----------
Confidence            9999887532       2222666677776643221   11111111            001100 000           


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEccccCCC-CcccCChhHHHHHHHHHHhcCCEEEEechhc-----Cccccccccee
Q 010250          253 STRLANNLEDLILKEGPETIAAFIAEPVIGAG-GVIPPPATYFEKVQAVVKKYDILFIADEVIC-----AFGRLGTMFGC  326 (514)
Q Consensus       253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~-G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-----G~gr~G~~~~~  326 (514)
                        .++++|+++     ++ +++|++++.++++ |. .++.+++++|.++|++||++||+||+|.     ++|+....+. 
T Consensus       125 --~d~~~l~~~-----~~-~~~v~~~~p~np~~G~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~-  194 (357)
T 3lws_A          125 --MTLDEIKAL-----PD-IACLLLELPQREIGGV-APAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA-  194 (357)
T ss_dssp             --CCHHHHHTC-----CS-CSEEEEESSBGGGTSB-CCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH-
T ss_pred             --cCHHHHhcC-----cC-cceEEEEcccccCCce-eCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH-
Confidence              114555544     22 6677888777665 64 5678899999999999999999999875     1222211111 


Q ss_pred             cccCCCCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHH
Q 010250          327 DKYSIKPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQV  404 (514)
Q Consensus       327 ~~~gv~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~  404 (514)
                          ...|++  +++|+++|.  ..|++++++++++.+....    ....+..+..++. ++++.++|+...  +..++.
T Consensus       195 ----~~~d~~~~s~sK~~~~~--~gg~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~l~~~~--~~~~~~  261 (357)
T 3lws_A          195 ----GLFDSIYISFYKGLGGI--AGAILAGPAAFCQTARIWK----RRYGGDLISLYPY-IVSADYYYELRK--DRMGQY  261 (357)
T ss_dssp             ----TTSSEEEEESSSTTCCS--SCEEEEECHHHHHHHHHHH----HHTTCCCSCCHHH-HHHHHHHHHHHT--TCHHHH
T ss_pred             ----hcCCEEEEeccccCCCC--ceEEEEcCHHHHHHHHHHH----HHhcCCcccchHH-HHHHHHHHHHHH--HHHHHH
Confidence                123544  789999663  2288889999988875311    1111223333444 344556676532  224456


Q ss_pred             HHHHHHHHhhhhhccCCCceeE--EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC----C--EE
Q 010250          405 NKIAPKFQDGVKAFSDSPIIGE--IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG----D--NI  476 (514)
Q Consensus       405 ~~~~~~l~~~L~~l~~~~~~~~--v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g----~--~i  476 (514)
                      .++++++.+.|+++   +.+..  ....+.++.+++.....         .....+.+.|.++||++.++.    +  .+
T Consensus       262 ~~~~~~l~~~L~~~---~g~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~  329 (357)
T 3lws_A          262 YEQAKQLAEQFNAL---PGVHTTPEVPVSNMFHLHFDGQAA---------DISPKLEQVQEETGLGFVGYLVDKDGYCST  329 (357)
T ss_dssp             HHHHHHHHHHHHTS---TTEEEESSSCSSSEEEEEEESCHH---------HHHHHHHHHHHHHCEESCSCCEECSSEEEE
T ss_pred             HHHHHHHHHHHHhC---CCCeeccCCCcceEEEEEecCChH---------HHHHHHHHHHHhcCeEEecccccCCCceEE
Confidence            77788888888765   22221  12346677777754210         013467788999999988641    2  58


Q ss_pred             EEeCC---CCCCHHHHHHHHHHHHHHH
Q 010250          477 MMSPP---FIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       477 Ri~p~---~~~t~e~id~~~~~l~~~l  500 (514)
                      |++..   +..++++|++++++|.+++
T Consensus       330 r~~i~~~~~~~~~~~l~~al~~l~~al  356 (357)
T 3lws_A          330 EISVGDAYGELDQQTRDAGFARLRQAF  356 (357)
T ss_dssp             EEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred             EEEecchhhhcCHHHHHHHHHHHHHhc
Confidence            88754   3468999999999998765

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.86  E-value=1.3e-20  Score=191.66  Aligned_cols=318  Identities=17%  Similarity=0.146  Sum_probs=199.1

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccE
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK  196 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~  196 (514)
                      -+|++++|+.++++....+      +.+...++++.|+++++   .+++++++||++|++.+++.++.+    . .++++
T Consensus        11 ~~~~v~~a~~~~~~~~~~~------~~~~~~~l~~~la~~~~---~~~v~~~~ggt~al~~~~~~~~~~----~-~~gd~   76 (375)
T 2fnu_A           11 LDKEDKKAVLEVLNSKQLT------QGKRSLLFEEALCEFLG---VKHALVFNSATSALLTLYRNFSEF----S-ADRNE   76 (375)
T ss_dssp             CCHHHHHHHHHHHTSSCCS------SSHHHHHHHHHHHHHHT---CSEEEEESCHHHHHHHHHHHSSCC----C-TTSCE
T ss_pred             CCHHHHHHHHHHHHcCccc------CChHHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHHhccc----C-CCCCE
Confidence            5899999999999763211      34567889999999983   348999999999999999876210    1 23468


Q ss_pred             EEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 010250          197 FIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFI  276 (514)
Q Consensus       197 ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavi  276 (514)
                      |++.+++||+....... .|....            .++.....             ..++++|++.+.    +++++|+
T Consensus        77 Vl~~~~~~~~~~~~~~~-~g~~~~------------~~~~~~~~-------------~~d~~~l~~~i~----~~~~~v~  126 (375)
T 2fnu_A           77 IITTPISFVATANMLLE-SGYTPV------------FAGIKNDG-------------NIDELALEKLIN----ERTKAIV  126 (375)
T ss_dssp             EEECSSSCTHHHHHHHH-TTCEEE------------ECCBCTTS-------------SBCGGGSGGGCC----TTEEEEE
T ss_pred             EEECCCccHhHHHHHHH-CCCEEE------------EeccCCCC-------------CCCHHHHHhhcC----cCceEEE
Confidence            99999999987543322 221111            01110000             001345555443    3455544


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chh--hhhcCCcccceeE
Q 010250          277 AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFA--KALSSAYMPIGAI  352 (514)
Q Consensus       277 vEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~s--K~l~gG~~pig~v  352 (514)
                      +...   +|.+.+    +++|.++|++||+++|+||+|+ +|.....   ...+..+|++  +++  |.++.|   +|++
T Consensus       127 ~~~~---tG~~~~----l~~i~~l~~~~~~~li~D~a~~-~~~~~~~---~~~~~~~~i~~~s~s~~K~~~~g---~g~~  192 (375)
T 2fnu_A          127 SVDY---AGKSVE----VESVQKLCKKHSLSFLSDSSHA-LGSEYQN---KKVGGFALASVFSFHAIKPITTA---EGGA  192 (375)
T ss_dssp             EECG---GGCCCC----HHHHHHHHHHHTCEEEEECTTC-TTCEETT---EETTSSSSEEEEECCTTSSSCCS---SCEE
T ss_pred             EeCC---cCCccC----HHHHHHHHHHcCCEEEEECccc-cCCeECC---eeccccCCeEEEeCCCCCCcccc---CceE
Confidence            4333   577766    8999999999999999999997 4332211   1223223554  677  988543   6777


Q ss_pred             Ee-C-HHHHHHhhhccCCCC------c---ccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCC
Q 010250          353 LV-S-PEVSEVIHSQSNTLG------S---FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS  421 (514)
Q Consensus       353 ~~-~-~~i~~~l~~~~~~~~------~---~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~  421 (514)
                      ++ + +++++.+........      .   ...+.++..+++.++++...++.+  ++..++.+++.+++.+.|+++...
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~~~~~~~~~l~~~L~~~~~~  270 (375)
T 2fnu_A          193 VVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKA--PFLMQKREEAALTYDRIFKDNPYF  270 (375)
T ss_dssp             EEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTH--HHHHHHHHHHHHHHHHHHTTCSSE
T ss_pred             EEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCCCc
Confidence            77 3 778777654210000      0   012233456788777776655443  246788888899999988875221


Q ss_pred             CceeE---EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--------------------------
Q 010250          422 PIIGE---IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------------------------  472 (514)
Q Consensus       422 ~~~~~---v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------------------------  472 (514)
                      .+...   ..+.+.++.+.+....         ......+.+.|.++||.++..                          
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  341 (375)
T 2fnu_A          271 TPLHPLLKDKSSNHLYPILMHQKF---------FTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFY  341 (375)
T ss_dssp             EESGGGCSSCCCCSCEEEEECGGG---------GGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHH
T ss_pred             cccCCCCCCCcceEEEEEEeCccc---------cchHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHH
Confidence            11110   0122334456654310         001456888899999998721                          


Q ss_pred             CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          473 GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       473 g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      .+.||++++..+|++|+++++++|+++++++
T Consensus       342 ~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~  372 (375)
T 2fnu_A          342 HAEISLPCHANLNLESVQNIAHSVLKTFESF  372 (375)
T ss_dssp             HHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             hCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence            1469999998899999999999999988654

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.86  E-value=4.7e-20  Score=192.69  Aligned_cols=319  Identities=14%  Similarity=0.096  Sum_probs=191.8

Q ss_pred             CCHHHHHHHHHHHh-cCCccc---cccccCCc--hHHHHH-HHHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhh
Q 010250          117 SEPRLVAAATAQLN-TLPFYH---SFWNRTTK--PSLDLA-KELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNA  188 (514)
Q Consensus       117 ~~p~v~~A~~~~l~-~~~~~~---~~~~~~~~--~~~ela-~~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~  188 (514)
                      .+|+|++|+.+++. .....+   .++.+...  ...+++ +++++++   +.+.+.+ ++||++|++.+++.++     
T Consensus        57 ~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~---g~~~~~v~~~sGs~a~~~a~~~~~-----  128 (447)
T 3h7f_A           57 VPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALF---GAEFANVQPHSGAQANAAVLHALM-----  128 (447)
T ss_dssp             CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH---TCSEEECCCSSHHHHHHHHHHHHC-----
T ss_pred             CCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHc---CCCceEEEeCCHHHHHHHHHHHhc-----
Confidence            49999999999885 332221   12222211  225566 8888887   3445666 9999999999998774     


Q ss_pred             cCCCCccEEEEEecCCcccc-eee-eecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHH
Q 010250          189 LGRPNKKKFIARQKSYHGST-LIA-ASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLIL  265 (514)
Q Consensus       189 ~~~~~~~~ii~~~~~yHG~t-~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~  265 (514)
                         ..+++|++.+++|++.. .+. ....+..     +.     ....+.. ..+             ..++++|++++.
T Consensus       129 ---~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~-----~~-----~~~~~~~~~~~-------------~~d~~~l~~~i~  182 (447)
T 3h7f_A          129 ---SPGERLLGLDLANGGHLTHGMRLNFSGKL-----YE-----NGFYGVDPATH-------------LIDMDAVRATAL  182 (447)
T ss_dssp             ---CTTCEEEEECGGGTCCGGGTCTTSHHHHS-----SE-----EEEECCCTTTC-------------SCCHHHHHHHHH
T ss_pred             ---CCCCEEEecCcccccccchhhhhhhcCCe-----eE-----EEEcCcCcccC-------------CcCHHHHHHHHH
Confidence               33568999999987732 111 1111100     00     0001110 000             112578888876


Q ss_pred             HhCCCcEEEEEE-ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchh--chhhh
Q 010250          266 KEGPETIAAFIA-EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLV--SFAKA  341 (514)
Q Consensus       266 ~~~~~~~aaviv-Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv--~~sK~  341 (514)
                      +..+   .+|++ .|.+++++       ++++|+++|++||++||+||+|. |+.+.|.....  .. ..|++  +++|+
T Consensus       183 ~~~~---~~i~~~~~~~~~~~-------~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~--~~-~~di~~~s~sK~  249 (447)
T 3h7f_A          183 EFRP---KVIIAGWSAYPRVL-------DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSP--VP-HADVVSTTVHKT  249 (447)
T ss_dssp             HHCC---SEEEEECSSCCSCC-------CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCS--TT-TCSEEEEESSGG
T ss_pred             hcCC---eEEEEcCCCCCCcc-------CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCC--CC-CCcEEEecCCcC
Confidence            5332   34555 67665543       49999999999999999999974 55444432211  11 24666  56899


Q ss_pred             hcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCc-HHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhh
Q 010250          342 LSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH-PVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKA  417 (514)
Q Consensus       342 l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~-pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~  417 (514)
                      ++|  ++.|++++++++++.+...       ...+++++. ...++++.+++..+.+   +++.+++.++++++.+.|++
T Consensus       250 l~G--~~gG~i~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~  320 (447)
T 3h7f_A          250 LGG--GRSGLIVGKQQYAKAINSA-------VFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMA  320 (447)
T ss_dssp             GCC--CSCEEEEECGGGHHHHHHH-------HTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             CCC--CCeEEEEECHHHHHHHhhh-------cCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHh
Confidence            975  6889999999988887642       122233332 3334444455554432   34677888888888888876


Q ss_pred             c----cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE----ee-------CCEEEEeCCC
Q 010250          418 F----SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VS-------GDNIMMSPPF  482 (514)
Q Consensus       418 l----~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~-------g~~iRi~p~~  482 (514)
                      .    ...+.+.. ...+.++.+++.....          ....+...|.++||++.    +.       ++.+|+.+|.
T Consensus       321 ~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~  389 (447)
T 3h7f_A          321 PDVAKAGVSVVSG-GTDVHLVLVDLRDSPL----------DGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPA  389 (447)
T ss_dssp             HHHHHTTCEEGGG-SCSSSEEEEECTTSSC----------CHHHHHHHHHHTTEECBC-------------CEEEEECHH
T ss_pred             ccccCCCeEEecC-CCCCCEEEEEcCCCCC----------CHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHH
Confidence            4    12222110 0123455566543211          13445566777799987    32       2569998876


Q ss_pred             C----CCHHHHHHHHHHHHHHHHH
Q 010250          483 I----MSPEEVDELISKYGKALKA  502 (514)
Q Consensus       483 ~----~t~e~id~~~~~l~~~l~~  502 (514)
                      .    ++++|+++++++|++++++
T Consensus       390 ~~~~~~~~eei~~~~~~l~~~l~~  413 (447)
T 3h7f_A          390 LATRGFGDTEFTEVADIIATALAT  413 (447)
T ss_dssp             HHHHTCCHHHHHHHHHHHHHHHHS
T ss_pred             HhhCCCCHHHHHHHHHHHHHHHhc
Confidence            5    7899999999999999853

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.85  E-value=3.9e-20  Score=189.43  Aligned_cols=314  Identities=13%  Similarity=0.114  Sum_probs=205.7

Q ss_pred             CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEE
Q 010250          118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF  197 (514)
Q Consensus       118 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~i  197 (514)
                      +|++++++.+++++..+      .+.+...++++.++++++   .+++++++||++|++.+++.+.      . .++++|
T Consensus        19 ~~~~~~a~~~~~~~~~~------~~~~~~~~l~~~la~~~~---~~~~~~~~~gt~al~~~~~~~~------~-~~gd~V   82 (393)
T 1mdo_A           19 GAEELAAVKTVLDSGWI------TTGPKNQELEAAFCRLTG---NQYAVAVSSATAGMHIALMALG------I-GEGDEV   82 (393)
T ss_dssp             CHHHHHHHHHHHHHTCC------SSSHHHHHHHHHHHHHHC---CSEEEEESCHHHHHHHHHHHTT------C-CTTCEE
T ss_pred             CHHHHHHHHHHHhcCCc------CCChHHHHHHHHHHHHhC---CCcEEEecChHHHHHHHHHHcC------C-CCCCEE
Confidence            58899999999876422      134567889999999983   4589999999999999998761      1 335689


Q ss_pred             EEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 010250          198 IARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFI  276 (514)
Q Consensus       198 i~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavi  276 (514)
                      ++.+++|++.... +...|....            .++.. +.+.             .++++|++.+.    +++++|+
T Consensus        83 l~~~~~~~~~~~~-~~~~g~~~~------------~v~~~~~~~~-------------~d~~~l~~~l~----~~~~~v~  132 (393)
T 1mdo_A           83 ITPSMTWVSTLNM-IVLLGANPV------------MVDVDRDTLM-------------VTPEHIEAAIT----PQTKAII  132 (393)
T ss_dssp             EEESSSCHHHHHH-HHHTTCEEE------------EECBCTTTCC-------------BCHHHHHHHCC----TTEEEEC
T ss_pred             EeCCCccHhHHHH-HHHCCCEEE------------EEeccCCcCC-------------CCHHHHHHhcC----CCceEEE
Confidence            9999999886432 222222111            11111 0000             11467776664    3577888


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhchh----hhhcCCccccee
Q 010250          277 AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGA  351 (514)
Q Consensus       277 vEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~s----K~l~gG~~pig~  351 (514)
                      +.+.   .|.+.+    +++|.++|++||+++|+||+|+ |+...|..     ++. +|++++|    |++++|  ++|+
T Consensus       133 ~~~~---~G~~~~----~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~-----~~~-~d~~~~S~~k~K~l~~~--~~g~  197 (393)
T 1mdo_A          133 PVHY---AGAPAD----LDAIYALGERYGIPVIEDAAHATGTSYKGRH-----IGA-RGTAIFSFHAIKNITCA--EGGI  197 (393)
T ss_dssp             CBCG---GGCCCC----HHHHHHHHHHHTCCBCEECTTCTTCEETTEE-----TTS-SSEEEEECCTTSSSCSS--SCEE
T ss_pred             EeCC---CCCcCC----HHHHHHHHHHcCCeEEEECccccCCeECCee-----cCC-CCeEEEeCCCCCccccc--cceE
Confidence            7763   455554    9999999999999999999998 44333321     232 7888766    899874  6888


Q ss_pred             EEeC-HHHHHHhhhccCCCC--------------cc---cccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Q 010250          352 ILVS-PEVSEVIHSQSNTLG--------------SF---SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQD  413 (514)
Q Consensus       352 v~~~-~~i~~~l~~~~~~~~--------------~~---~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~  413 (514)
                      ++++ +++++.+........              .+   ..|..+..+++.++++.+.++.++  +..++.+++.+++++
T Consensus       198 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~--~~~~~~~~~~~~l~~  275 (393)
T 1mdo_A          198 VVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLD--ALNARRAAIAAQYHQ  275 (393)
T ss_dssp             EEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHH
T ss_pred             EEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence            8886 788877754211000              00   011113457888888777776543  456777788888888


Q ss_pred             hhhhccCCCce--e--EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC----------------
Q 010250          414 GVKAFSDSPII--G--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG----------------  473 (514)
Q Consensus       414 ~L~~l~~~~~~--~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g----------------  473 (514)
                      .|+++. ..+.  .  ..++.+.++.+.+.+.....        ....+.+.|.++||.+++..                
T Consensus       276 ~L~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~  346 (393)
T 1mdo_A          276 AMADLP-FQPLSLPSWEHIHAWHLFIIRVDEARCGI--------TRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTL  346 (393)
T ss_dssp             HHHTSS-CEECCCCSSCEECCCSCEEEECCHHHHSS--------CHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTC
T ss_pred             HHhcCC-cccccCCCCCCCceeEEEEEEeccccccc--------CHHHHHHHHHhCCCCcccccCccccChhhhccCCcc
Confidence            887752 1111  0  12334456777775310000        14568889999999887521                


Q ss_pred             ----------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          474 ----------DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       474 ----------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                                ..||+++...+|++|+++++++|+++++..
T Consensus       347 ~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~  386 (393)
T 1mdo_A          347 TLPDTEWNSERICSLPLFPDMTESDFDRVITALHQIAGQG  386 (393)
T ss_dssp             CCHHHHHHHTTEEEECCCTTCCHHHHHHHHHHHHHHHC--
T ss_pred             CChhHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHhcC
Confidence                      269999888899999999999999887543

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.85  E-value=1.2e-19  Score=188.27  Aligned_cols=323  Identities=9%  Similarity=0.066  Sum_probs=203.9

Q ss_pred             ccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCC
Q 010250          112 TALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR  191 (514)
Q Consensus       112 ~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~  191 (514)
                      ..++ .+|++.+++.+.++... |    ........++.+.|+++++   .+++++++||++|++.+++.+.        
T Consensus        26 p~~~-~p~~~~~a~~~~~~~~~-y----~~~~~~~~~l~~~la~~~~---~~~v~~~~ggt~al~~~l~~l~--------   88 (424)
T 2po3_A           26 PNRI-DRARLYERLDRALDSQW-L----SNGGPLVREFEERVAGLAG---VRHAVATCNATAGLQLLAHAAG--------   88 (424)
T ss_dssp             CCCC-CHHHHHHHHHHHHHHTC-C----SSSCHHHHHHHHHHHHHHT---SSEEEEESCHHHHHHHHHHHHT--------
T ss_pred             CCCC-ChHHHHHHHHHHHhcCC-c----ccCCHHHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHHcC--------
Confidence            3455 36789999999887532 1    1113567889999999983   4689999999999999998762        


Q ss_pred             CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhHHHHHHHHHHHHHHHHhCCC
Q 010250          192 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLANNLEDLILKEGPE  270 (514)
Q Consensus       192 ~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~  270 (514)
                      + +++|++.+++|++...... ..|....            .++... .|.             .++++|++.+.    +
T Consensus        89 ~-gd~Vlv~~~~~~~~~~~~~-~~G~~~~------------~v~~~~~~~~-------------~d~~~l~~~i~----~  137 (424)
T 2po3_A           89 L-TGEVIMPSMTFAATPHALR-WIGLTPV------------FADIDPDTGN-------------LDPDQVAAAVT----P  137 (424)
T ss_dssp             C-CSEEEEESSSCTHHHHHHH-HTTCEEE------------EECBCTTTSS-------------BCHHHHGGGCC----T
T ss_pred             C-CCEEEECCCccHHHHHHHH-HcCCEEE------------EEecCCCcCC-------------cCHHHHHHhhC----c
Confidence            3 3789999999998754322 2222111            111100 010             01456665553    3


Q ss_pred             cEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhchh----hhhcCC
Q 010250          271 TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSFA----KALSSA  345 (514)
Q Consensus       271 ~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~s----K~l~gG  345 (514)
                      ++++|++.+   .+|...+    +++|.++|++||+++|+||+|+ |+...|..     .+..+|++++|    |+|++ 
T Consensus       138 ~~~~v~~~~---~tG~~~~----l~~i~~la~~~~~~li~Dea~~~g~~~~~~~-----~~~~~di~~~S~sk~K~l~~-  204 (424)
T 2po3_A          138 RTSAVVGVH---LWGRPCA----ADQLRKVADEHGLRLYFDAAHALGCAVDGRP-----AGSLGDAEVFSFHATKAVNA-  204 (424)
T ss_dssp             TEEEEEEEC---GGGCCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETTEE-----TTSSSSEEEEECCTTSSSCC-
T ss_pred             CCcEEEEEC---CCCCcCC----HHHHHHHHHHcCCEEEEECccccCCeECCee-----cccccCEEEEeCCCCCCccC-
Confidence            566776643   3565544    9999999999999999999999 77654432     22225776554    88877 


Q ss_pred             cccceeEEeC-HHHHHHhhhccCCC--Ccc---cccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc
Q 010250          346 YMPIGAILVS-PEVSEVIHSQSNTL--GSF---SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS  419 (514)
Q Consensus       346 ~~pig~v~~~-~~i~~~l~~~~~~~--~~~---~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~  419 (514)
                       .++|+++++ +++++.+.......  ..+   ..+.++..+++.+++++..++.++  ++.++.+++.+++++.|+++.
T Consensus       205 -~~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~~~~~~--~~~~~~~~~~~~l~~~L~~~~  281 (424)
T 2po3_A          205 -FEGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTSLDAFP--EVIDRNRRNHAAYREHLADLP  281 (424)
T ss_dssp             -SSCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHTCSCT
T ss_pred             -CCCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccCC
Confidence             588999998 88887765321100  000   112233446777777776665543  367777788888888887642


Q ss_pred             CCCceeEEEe-e--eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-C-C--------------------
Q 010250          420 DSPIIGEIRG-T--GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-G-D--------------------  474 (514)
Q Consensus       420 ~~~~~~~v~g-~--g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g-~--------------------  474 (514)
                      ...+.....+ .  ..++.+.+.+.....        ....+.+.|.++||.+.+. + .                    
T Consensus       282 g~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r  353 (424)
T 2po3_A          282 GVLVADHDRHGLNNHQYVIVEIDEATTGI--------HRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTER  353 (424)
T ss_dssp             TEEECCGGGGSCCCCCCEEEEECHHHHSS--------CHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHH
T ss_pred             CccccCCCCCCccccEEEEEEECCccchh--------hHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHH
Confidence            1111110111 1  134556654210000        1456778899999998752 1 0                    


Q ss_pred             ----EEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250          475 ----NIMMSPPFIMSPEEVDELISKYGKALKATEER  506 (514)
Q Consensus       475 ----~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~  506 (514)
                          .||+.....+|++|+++++++|++++++..+.
T Consensus       354 ~~~~~l~l~~~~~~t~e~i~~~~~~L~~~~~~~~~~  389 (424)
T 2po3_A          354 LAARVLSLPTGTAIGDDDIRRVADLLRLCATRGREL  389 (424)
T ss_dssp             HHTTEEEECCSTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhcCEEEeeCCCCCCHHHHHHHHHHHHHHHhhhHHH
Confidence                17777668999999999999999998766543

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.85  E-value=1.2e-20  Score=188.74  Aligned_cols=276  Identities=14%  Similarity=0.090  Sum_probs=182.4

Q ss_pred             HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee---cCCCccccCCC
Q 010250          148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS---LSGLPALHQKF  224 (514)
Q Consensus       148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~---~s~~~~~~~~~  224 (514)
                      +++++|+++++   .+++++++||++|++.+++.+.        .++++|++.++.||+.......   ..|...     
T Consensus         2 ~l~~~la~~~g---~~~~i~~~sG~~a~~~~~~~~~--------~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~-----   65 (331)
T 1pff_A            2 ALEGKIAKLEH---AEACAATASGMGAIAASVWTFL--------KAGDHLISDDCLYGCTHALFEHQLRKFGVEV-----   65 (331)
T ss_dssp             HHHHHHHHHHT---CSEEEEESSHHHHHHHHHHHHC--------CTTCEEEEESCCCHHHHHHHHTHHHHTTCEE-----
T ss_pred             hHHHHHHHHhC---CCeEEEeCChHHHHHHHHHHhc--------CCCCEEEEcCCCcchHHHHHHHHHHhcCCEE-----
Confidence            57788888874   2477888889999999998663        2346899999999886432211   112111     


Q ss_pred             CCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHh-
Q 010250          225 DLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKK-  303 (514)
Q Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~-  303 (514)
                             ..++..                  +.+++++.+.    +++++|+++++++++|.+.+    +++|.++|++ 
T Consensus        66 -------~~~~~~------------------d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----~~~i~~~~~~~  112 (331)
T 1pff_A           66 -------DFIDMA------------------VPGNIEKHLK----PNTRIVYFETPANPTLKVID----IEDAVKQARKQ  112 (331)
T ss_dssp             -------EEECTT------------------STTHHHHTCC----TTEEEEEEESSCTTTCCCCC----HHHHHHHHTTS
T ss_pred             -------EEeCCC------------------CHHHHHHhhc----CCCeEEEEECCCCCcCcccC----HHHHHHHHhhh
Confidence                   111110                  1355666553    46889999999999999886    9999999999 


Q ss_pred             cCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCccc-ceeEEeCH-HHHHHhhhccCCCCccccc-CCC
Q 010250          304 YDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMP-IGAILVSP-EVSEVIHSQSNTLGSFSHG-FTY  378 (514)
Q Consensus       304 ~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~p-ig~v~~~~-~i~~~l~~~~~~~~~~~~~-~t~  378 (514)
                      ||+++|+||+|+ .|.....  . .++  +|++  +++|.+++++.+ +|++++++ ++++.+..       ...+ .+.
T Consensus       113 ~~~~li~D~a~~-~~~~~~~--~-~~~--~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~-------~~~~~~~~  179 (331)
T 1pff_A          113 KDILVIVDNTFA-SPILTNP--L-DLG--VDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQ-------GIKDITGA  179 (331)
T ss_dssp             SSCEEEEECTTT-HHHHCCG--G-GGT--CSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHT-------CCCCCCCC
T ss_pred             cCCEEEEECCCc-ccccCCh--h-hcC--CcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHH-------HHHhhcCC
Confidence            999999999997 3232211  1 233  5655  688999986567 78999998 89888874       2333 456


Q ss_pred             CCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhh--hhh-----ccCCCcee----EEEeeeeeEEEEEccCCCCC
Q 010250          379 SGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDG--VKA-----FSDSPIIG----EIRGTGLILGTEFADNKSPN  445 (514)
Q Consensus       379 ~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~--L~~-----l~~~~~~~----~v~g~g~~~~i~~~~~~~~~  445 (514)
                      ..+++++.++.++++.+..  +...++.....+++++.  +.+     +...+.+.    ..++.|.++.+.+.+     
T Consensus       180 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-----  254 (331)
T 1pff_A          180 IISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDG-----  254 (331)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS-----
T ss_pred             CCCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC-----
Confidence            6788888887777775532  22344444444444432  111     11111110    123467788887741     


Q ss_pred             CCCCCccchHHHHHHHHHHCCcEEEee-------------------------------CCEEEEeCCCCCCHHHHHHHHH
Q 010250          446 EPFPPEWGIGAYFGAQCEKHGMLVRVS-------------------------------GDNIMMSPPFIMSPEEVDELIS  494 (514)
Q Consensus       446 ~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------------------------------g~~iRi~p~~~~t~e~id~~~~  494 (514)
                               ...+...|.++||+++..                               .+.||++++...|+++|+.+++
T Consensus       255 ---------~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~  325 (331)
T 1pff_A          255 ---------LEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQ  325 (331)
T ss_dssp             ---------HHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHH
T ss_pred             ---------HHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHH
Confidence                     234667888899976432                               2579999999999999999999


Q ss_pred             HHHHH
Q 010250          495 KYGKA  499 (514)
Q Consensus       495 ~l~~~  499 (514)
                      +|+++
T Consensus       326 ~l~~~  330 (331)
T 1pff_A          326 ALDLV  330 (331)
T ss_dssp             HHHTC
T ss_pred             HHHHh
Confidence            88754

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.85  E-value=6e-21  Score=197.12  Aligned_cols=319  Identities=16%  Similarity=0.128  Sum_probs=182.7

Q ss_pred             CCHHHHHHHHHHHhc-CCccc---cccc--cCCchHHHHH-HHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhc
Q 010250          117 SEPRLVAAATAQLNT-LPFYH---SFWN--RTTKPSLDLA-KELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL  189 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~-~~~~~---~~~~--~~~~~~~ela-~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~  189 (514)
                      .||+|++|+.+++.+ ....+   ..+.  ...+...+++ +++++.++. +.+. ++++||++|++.+++.+.      
T Consensus        42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~~~~-v~~~sGs~a~~~a~~~~~------  113 (420)
T 3gbx_A           42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGA-DYAN-VQPHSGSQANFAVYTALL------  113 (420)
T ss_dssp             CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTC-SEEE-CCCSSHHHHHHHHHHHHC------
T ss_pred             CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCC-CCce-eEecCcHHHHHHHHHHhc------
Confidence            699999999999843 21111   1111  1123334444 667777632 2223 346889999999998763      


Q ss_pred             CCCCccEEEEEecCCcccceeee--ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh
Q 010250          190 GRPNKKKFIARQKSYHGSTLIAA--SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE  267 (514)
Q Consensus       190 ~~~~~~~ii~~~~~yHG~t~~~~--~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~  267 (514)
                        ..++.|++.++.|++......  ...+...          .....+....+             ..++++|++++.+.
T Consensus       114 --~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~----------~~~~~~~~~~~-------------~~d~~~l~~~i~~~  168 (420)
T 3gbx_A          114 --QPGDTVLGMNLAQGGHLTHGSPVNFSGKLY----------NIVPYGIDESG-------------KIDYDEMAKLAKEH  168 (420)
T ss_dssp             --CTTCEEEEEEEC------------CHHHHS----------EEEEEEECTTC-------------SCCHHHHHHHHHHH
T ss_pred             --CCCCEEEecchhhcceeccchhhhhcccce----------eEEeccCCccC-------------CcCHHHHHHHHHhc
Confidence              335678887777655321111  1111000          00000000000             01257888888653


Q ss_pred             CCCcEEEEEE-ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhc--hhhhhc
Q 010250          268 GPETIAAFIA-EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVS--FAKALS  343 (514)
Q Consensus       268 ~~~~~aaviv-Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~--~sK~l~  343 (514)
                         ++++|++ +|.++   ...+    +++|+++|++||+++|+||+|+ |+.+.|.....  .. .+|+++  ++|+++
T Consensus       169 ---~~~~v~~~~~~~~---~~~~----l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~--~~-~~di~~~s~sK~~~  235 (420)
T 3gbx_A          169 ---KPKMIIGGFSAYS---GVVD----WAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNP--VP-HAHVVTTTTHKTLA  235 (420)
T ss_dssp             ---CCSEEEECCTTCC---SCCC----HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCS--TT-TSSEEEEESSGGGC
T ss_pred             ---CCeEEEEecCccC---CccC----HHHHHHHHHHcCCEEEEECCcchhceecccCCcc--cc-cCCEEEeecccCCC
Confidence               3456666 45543   3443    9999999999999999999975 55444432211  11 278887  679998


Q ss_pred             CCcccceeEEeCH---HHHHHhhhccCCCCcccccCCCCCc-HHHHHHHHHHHHHH-hh--ccHHHHHHHHHHHHHhhhh
Q 010250          344 SAYMPIGAILVSP---EVSEVIHSQSNTLGSFSHGFTYSGH-PVSCAVAIEALKIY-KE--RNIVEQVNKIAPKFQDGVK  416 (514)
Q Consensus       344 gG~~pig~v~~~~---~i~~~l~~~~~~~~~~~~~~t~~~~-pl~~aaa~aal~~~-~~--~~~~~~~~~~~~~l~~~L~  416 (514)
                      |  .+.|++++++   ++++.+...       .+.++++.+ ...++++.+++... ++  +++.+++.++.+++++.|+
T Consensus       236 g--~~gg~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~  306 (420)
T 3gbx_A          236 G--PRGGLILAKGGDEELYKKLNSA-------VFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFL  306 (420)
T ss_dssp             S--CSCEEEEESSCCHHHHHHHHHH-------HC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C--CCceEEEEcCCcHHHHHHhhhh-------cCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHH
Confidence            5  3458888887   777777631       222223332 33333333344333 22  3567888889999999998


Q ss_pred             hccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe-------e----CCEEEEeCCCC--
Q 010250          417 AFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV-------S----GDNIMMSPPFI--  483 (514)
Q Consensus       417 ~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~-------~----g~~iRi~p~~~--  483 (514)
                      +. ...++. ....+.++.+.+.....          ....+.+.|.++||++.+       .    .+.+||+++..  
T Consensus       307 ~~-g~~~~~-~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~  374 (420)
T 3gbx_A          307 NR-GYKVVS-GGTENHLFLLDLVDKNL----------TGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTR  374 (420)
T ss_dssp             HT-TCEEGG-GSCSSSEEEEECGGGTC----------CHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHH
T ss_pred             hc-CCeecc-CCCCCeEEEEEcCCCCC----------CHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcc
Confidence            74 221111 01245566777654221          144577788889999987       1    13599998765  


Q ss_pred             --CCHHHHHHHHHHHHHHHHH
Q 010250          484 --MSPEEVDELISKYGKALKA  502 (514)
Q Consensus       484 --~t~e~id~~~~~l~~~l~~  502 (514)
                        +++++|++++++|++++++
T Consensus       375 ~~~~~~~i~~~~~~l~~~l~~  395 (420)
T 3gbx_A          375 RGFKEAEVKELAGWMCDVLDN  395 (420)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHT
T ss_pred             cCCCHHHHHHHHHHHHHHHhC
Confidence              5689999999999998864

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.85  E-value=6.9e-21  Score=195.21  Aligned_cols=313  Identities=13%  Similarity=0.147  Sum_probs=199.9

Q ss_pred             CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEE
Q 010250          118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF  197 (514)
Q Consensus       118 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~i  197 (514)
                      +|++.+++.+.+....+     ..+.+...++++.++++++   .+++++++||++|++.+++.+.      . ..+++|
T Consensus        35 ~~~~~~a~~~~~~~~~~-----~~~~~~~~~l~~~la~~~~---~~~~i~~~~gt~al~~~l~~~~------~-~~gd~v   99 (391)
T 3dr4_A           35 DGNERDYVLECMDTTWI-----SSVGRFIVEFEKAFADYCG---VKHAIACNNGTTALHLALVAMG------I-GPGDEV   99 (391)
T ss_dssp             CSSHHHHHHHHHHHTCC-----SSCSHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHHHHT------C-CTTCEE
T ss_pred             CHHHHHHHHHHHHcCCc-----cCCChHHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHcC------C-CCcCEE
Confidence            36788888887765321     1245677899999999983   4589999999999999999872      1 345789


Q ss_pred             EEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 010250          198 IARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFI  276 (514)
Q Consensus       198 i~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavi  276 (514)
                      ++.+++|++........+....             .++.. ..|..             ++++|++.+.    +++++|+
T Consensus       100 l~~~~~~~~~~~~~~~~g~~~~-------------~~~~~~~~~~~-------------d~~~l~~~~~----~~~~~v~  149 (391)
T 3dr4_A          100 IVPSLTYIASANSVTYCGATPV-------------LVDNDPRTFNL-------------DAAKLEALIT----PRTKAIM  149 (391)
T ss_dssp             EEESSSCTHHHHHHHHTTCEEE-------------EECBCTTTCSB-------------CGGGSGGGCC----TTEEEEC
T ss_pred             EECCCchHHHHHHHHHCCCEEE-------------EEecCccccCc-------------CHHHHHHhcC----CCceEEE
Confidence            9999999987544332221111             11111 00110             1244555443    3577777


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh----hhhcCCcccceeE
Q 010250          277 AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAI  352 (514)
Q Consensus       277 vEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s----K~l~gG~~pig~v  352 (514)
                      +.   +..|.+.+    +++|.++|++||+++|+||+|+ +|..   +.-...+..+|++++|    |+|++|  +.|++
T Consensus       150 ~~---n~tG~~~~----~~~i~~l~~~~~~~li~D~a~~-~g~~---~~~~~~~~~~di~~~S~s~~K~l~~g--~gg~~  216 (391)
T 3dr4_A          150 PV---HLYGQICD----MDPILEVARRHNLLVIEDAAEA-VGAT---YRGKKSGSLGDCATFSFFGNAIITTG--EGGMI  216 (391)
T ss_dssp             CB---CGGGCCCC----HHHHHHHHHHTTCEEEEECTTC-TTCE---ETTEETTSSSSEEEEECBTTSSSCCB--SCEEE
T ss_pred             EE---CCCCChhh----HHHHHHHHHHcCCEEEEECccc-ccce---ECCeeecccCCEEEEECCCCCcCCcC--CeEEE
Confidence            43   35566655    9999999999999999999997 3221   1111233346787776    999874  47777


Q ss_pred             EeC-HHHHHHhhhccCC-------CCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCce
Q 010250          353 LVS-PEVSEVIHSQSNT-------LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPII  424 (514)
Q Consensus       353 ~~~-~~i~~~l~~~~~~-------~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~  424 (514)
                      +++ +++.+.+......       ......+..+..+++.+++++..++.++  ++.++.+++.+++++.|+++ ...+.
T Consensus       217 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~~--~~~~~~~~~~~~l~~~L~~~-g~~~~  293 (391)
T 3dr4_A          217 TTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERVD--EHLAARERVVGWYEQKLARL-GNRVT  293 (391)
T ss_dssp             EESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHHGGG-TTSEE
T ss_pred             EECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhhcC-Ccccc
Confidence            775 5566665431100       0001122335667777777776665443  46788888889999999876 33222


Q ss_pred             eE-----EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-------------------------C
Q 010250          425 GE-----IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------------------------D  474 (514)
Q Consensus       425 ~~-----v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-------------------------~  474 (514)
                      ..     ....+.++.+.+.+....         ....+.+.|.++||.+++..                         .
T Consensus       294 ~~~~~~~~~~~~~~~~i~~~~~~~~---------~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  364 (391)
T 3dr4_A          294 KPHVALTGRHVFWMYTVRLGEGLST---------TRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVD  364 (391)
T ss_dssp             CCCCCTTSCCCCSSEEEEECSSCSS---------CHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHH
T ss_pred             CcCCCCCCcceeEEEEEEECCccch---------hHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhC
Confidence            11     122233456666532110         14568899999999988542                         3


Q ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          475 NIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       475 ~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      .||+.+...+|+|||++++++|++++
T Consensus       365 ~lrl~~~~~~t~edi~~~~~~l~~~l  390 (391)
T 3dr4_A          365 GLNLPTHAGLTEADIDRVIAALDQVL  390 (391)
T ss_dssp             EEEECCCTTCCHHHHHHHHHHHHTTC
T ss_pred             eEEccCCCCCCHHHHHHHHHHHHHHh
Confidence            58999999999999999999998754

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.85  E-value=3e-19  Score=184.26  Aligned_cols=330  Identities=15%  Similarity=0.114  Sum_probs=190.9

Q ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHhc-CCccc---cccccCCchHHH----HHHHHHHhcCcCCCCeEEEeCChhH
Q 010250          102 YLDSLAGLWCTALGGSEPRLVAAATAQLNT-LPFYH---SFWNRTTKPSLD----LAKELLEMFTASKMAKVFFTNSGSE  173 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~-~~~~~---~~~~~~~~~~~e----la~~L~~~~~~~~~~~v~~~~sGse  173 (514)
                      .+++.++.   +  +.+|+|++|+.+++.+ ....+   .++. ......+    +.+++++.++. +.++ +++++|++
T Consensus        27 ~i~l~~~~---~--~~~~~v~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~~~g~-~~~~-i~~~sGt~   98 (417)
T 3n0l_A           27 GLEMIASE---N--FTLPEVMEVMGSILTNKYAEGYPGKRYYG-GCEFVDEIETLAIERCKKLFNC-KFAN-VQPNSGSQ   98 (417)
T ss_dssp             SEECCTTC---C--CCCHHHHHHHTBGGGGCCCCEETTEESSS-CCHHHHHHHHHHHHHHHHHHTC-SEEE-CCCSSHHH
T ss_pred             Ceeeeccc---C--CCCHHHHHHHhhhhhccccccCCCccccc-cchHHHHHHHHHHHHHHHHhCC-CCcc-eEeccHHH
Confidence            46665442   2  2489999999998843 32111   1111 2222233    34467777632 3233 45677899


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCccccee--eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhH
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI--AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE  251 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~--~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (514)
                      |++.+++.+.        ..+++|++.+++|++....  .....+..     +     ....++....+.          
T Consensus        99 a~~~~~~~~~--------~~gd~vl~~~~~~~~~~~~~~~~~~~g~~-----~-----~~~~~~~~~~~~----------  150 (417)
T 3n0l_A           99 ANQGVYAALI--------NPGDKILGMDLSHGGHLTHGAKVSSSGKM-----Y-----ESCFYGVELDGR----------  150 (417)
T ss_dssp             HHHHHHHHHS--------CTTCEEEEECC----------------CC-----S-----EEEEECCCTTSS----------
T ss_pred             HHHHHHHHhc--------CCCCEEEecccccccccchhhhhhhhcce-----e-----eeEeccCCCCCC----------
Confidence            9999998874        3457899999999875321  11111110     0     001111111111          


Q ss_pred             HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccC
Q 010250          252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYS  330 (514)
Q Consensus       252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~g  330 (514)
                         .++++|++.+.+.   ++++|++.+.+  .|.+.+    +++|+++|++||+++|+||+|+ |+...|....  ...
T Consensus       151 ---~d~~~l~~~i~~~---~~~~v~~~~~~--~G~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~--~~~  216 (417)
T 3n0l_A          151 ---IDYEKVREIAKKE---KPKLIVCGASA--YARVID----FAKFREIADEIGAYLFADIAHIAGLVVAGEHPS--PFP  216 (417)
T ss_dssp             ---CCHHHHHHHHHHH---CCSEEEECCSS--CCSCCC----HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCC--CTT
T ss_pred             ---cCHHHHHHHHHhc---CCeEEEECCcc--cCccCC----HHHHHHHHHHcCCEEEEECccchhhhhcccCCC--ccc
Confidence               1257888888643   23455554433  376665    9999999999999999999975 3322222110  001


Q ss_pred             CCCchhchh--hhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHH
Q 010250          331 IKPDLVSFA--KALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQV  404 (514)
Q Consensus       331 v~pDiv~~s--K~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~  404 (514)
                       ..|++++|  |+|+|  .++|+++++ +++++.+...      ..++.+.+.++..+++..++++...+   +++.+++
T Consensus       217 -~~di~~~s~sK~l~g--~~~G~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~  287 (417)
T 3n0l_A          217 -YAHVVSSTTHKTLRG--PRGGIIMTNDEELAKKINSA------IFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQV  287 (417)
T ss_dssp             -TCSEEEEESSTTTCS--CSCEEEEESCHHHHHHHHHH------HTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHH
T ss_pred             -cceEEEeeCccccCC--CCeeEEEECCHHHHHHHhhh------hCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence             25787655  99965  567999998 7888887642      12333444566666666666765332   3567778


Q ss_pred             HHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----------C
Q 010250          405 NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----------G  473 (514)
Q Consensus       405 ~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----------g  473 (514)
                      .++.+++.+.|++. ....... ...+.++.+.+.....          ....+.+.|.++||.+.+.           .
T Consensus       288 ~~~~~~l~~~L~~~-g~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~  355 (417)
T 3n0l_A          288 RTNAQVLANVLMDR-KFKLVSD-GTDNHLVLMSFLDREF----------SGKDADLALGNAGITANKNTVPGEIRSPFIT  355 (417)
T ss_dssp             HHHHHHHHHHHHHT-TCEEGGG-SCSSSEEEEECTTSSS----------CHHHHHHHHHHTTEECEECCCTTCCSCTTTC
T ss_pred             HHHHHHHHHHHHhC-CceeccC-CCCceEEEEEcccCCC----------CHHHHHHHHHHcCeEEeccccCCCCcccCCC
Confidence            88888888888763 2221110 0123355566543211          1445778888999998743           1


Q ss_pred             CEEEEeCCC----CCCHHHHHHHHHHHHHHHHH
Q 010250          474 DNIMMSPPF----IMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       474 ~~iRi~p~~----~~t~e~id~~~~~l~~~l~~  502 (514)
                      +.+|++++.    .+++++|++++++|++++++
T Consensus       356 ~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~  388 (417)
T 3n0l_A          356 SGLRLGTPALTARGFKEKEMEIVSNYIADILDD  388 (417)
T ss_dssp             SEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred             CeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence            459998763    36799999999999999864

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.85  E-value=5.9e-20  Score=188.46  Aligned_cols=252  Identities=11%  Similarity=0.014  Sum_probs=164.4

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP  218 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~  218 (514)
                      +.+...+++++|+++++   .+++++++||++|++.+++.+.        ..+++||+.++.||+.....   ....|..
T Consensus        57 ~~~~~~~l~~~la~~~g---~~~~i~~~sG~~ai~~~~~~~~--------~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~  125 (389)
T 3acz_A           57 GNPTVEQFEEMVCSIEG---AAGSAAFGSGMGAISSSTLAFL--------QKGDHLIAGDTLYGCTVSLFTHWLPRFGIE  125 (389)
T ss_dssp             CCHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHTTTC--------CTTCEEEEESSCCHHHHHHHHHHHHHTTCE
T ss_pred             CChHHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHHHh--------CCCCEEEEeCCCchHHHHHHHHHHHHcCCE
Confidence            45667899999999973   3478899999999999998653        33568999999998853221   1111211


Q ss_pred             cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ  298 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~  298 (514)
                      .            ..++..                  +.+++++.+.    +++++|++|++++++|.+.+    +++|.
T Consensus       126 ~------------~~v~~~------------------d~~~l~~~i~----~~~~~v~~~~~~nptG~~~~----l~~i~  167 (389)
T 3acz_A          126 V------------DLIDTS------------------DVEKVKAAWK----PNTKMVYLESPANPTCKVSD----IKGIA  167 (389)
T ss_dssp             E------------EEECTT------------------CHHHHHHTCC----TTEEEEEEESSCTTTCCCCC----HHHHH
T ss_pred             E------------EEECCC------------------CHHHHHHhcC----CCCeEEEEECCCCCCCeecC----HHHHH
Confidence            1            111110                  1466666553    46889999999999999887    99999


Q ss_pred             HHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccc-eeEEeCH-HHHHHhhhccCCCCcccc
Q 010250          299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPI-GAILVSP-EVSEVIHSQSNTLGSFSH  374 (514)
Q Consensus       299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pi-g~v~~~~-~i~~~l~~~~~~~~~~~~  374 (514)
                      ++|++||+++|+||+|+++ ..+..     .+..+|++  +++|.++|++.++ |++++++ ++++.+...       ..
T Consensus       168 ~~~~~~~~~livD~~~~~~-~~~~~-----~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~-------~~  234 (389)
T 3acz_A          168 VVCHERGARLVVDATFTSP-CFLKP-----LELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFY-------RK  234 (389)
T ss_dssp             HHHHHHTCEEEEECTTTCT-TTCCG-----GGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHH-------HH
T ss_pred             HHHHHcCCEEEEECCCccc-cccCc-----cccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHH-------HH
Confidence            9999999999999999854 22222     23457887  6889999876787 9999998 888877641       11


Q ss_pred             cCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-----------cCCCcee----EEEeeeeeEEEEEc
Q 010250          375 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-----------SDSPIIG----EIRGTGLILGTEFA  439 (514)
Q Consensus       375 ~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-----------~~~~~~~----~v~g~g~~~~i~~~  439 (514)
                      ......+|..+.++++.++.+..  ..++..++.+.+.+.|++.           ..+|...    ..++.|.++.+.+.
T Consensus       235 ~~g~~~~~~~~~~~~~~l~~l~~--r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~  312 (389)
T 3acz_A          235 DAGSLMAPMDAFLCARGMKTLPI--RMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK  312 (389)
T ss_dssp             HHCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES
T ss_pred             hcCCCCCHHHHHHHHcCccHHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC
Confidence            12334578888888887765432  2333444444555544432           1111110    11456788888875


Q ss_pred             cCCCCCCCCCCccchHHHHHHHHHHCCcEEEe
Q 010250          440 DNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV  471 (514)
Q Consensus       440 ~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~  471 (514)
                      .              .......+.+.|+++..
T Consensus       313 ~--------------~~~~~~~l~~~~i~~~~  330 (389)
T 3acz_A          313 S--------------FEAAKKLMEHLKVCTLA  330 (389)
T ss_dssp             S--------------HHHHHHHHTTCSSSEEB
T ss_pred             C--------------HHHHHHHHHhCCCcEEC
Confidence            3              12244556667777654

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.85  E-value=1.5e-20  Score=191.48  Aligned_cols=314  Identities=16%  Similarity=0.154  Sum_probs=196.1

Q ss_pred             ccCCCCCHHH----HHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHh
Q 010250          112 TALGGSEPRL----VAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN  187 (514)
Q Consensus       112 ~~lGh~~p~v----~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~  187 (514)
                      .++|+++|.+    .+++.+.+....      ..+.+...++++.++++++   .++++|++||++|++.+++.+.    
T Consensus         6 ~~l~~~~~~~~~~~~~a~~~~~~~~~------~~~~~~~~~l~~~la~~~~---~~~~i~~~sgt~al~~~l~~l~----   72 (373)
T 3frk_A            6 ASFKPMHDEIEYEIKFKFEEIYKRNW------FILGDEDKKFEQEFADYCN---VNYCIGCGNGLDALHLILKGYD----   72 (373)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHHHHHTC------CSSSHHHHHHHHHHHHHHT---SSEEEEESCHHHHHHHHHHHTT----
T ss_pred             cCCCcccCCCCHHHHHHHHHHHHCCC------ccCCchHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHHcC----
Confidence            4566665554    455555544332      1245667899999999983   4589999999999999998761    


Q ss_pred             hcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHH
Q 010250          188 ALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILK  266 (514)
Q Consensus       188 ~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~  266 (514)
                        . ..+++|++.+++|++...... ..|....            .++.. +.+..             ++++|++.+. 
T Consensus        73 --~-~~gd~Vi~~~~~~~~~~~~~~-~~g~~~~------------~~~~~~~~~~~-------------d~~~l~~~l~-  122 (373)
T 3frk_A           73 --I-GFGDEVIVPSNTFIATALAVS-YTGAKPI------------FVEPDIRTYNI-------------DPSLIESAIT-  122 (373)
T ss_dssp             --C-CTTCEEEEETTSCTHHHHHHH-HHSCEEE------------EECEETTTTEE-------------CGGGTGGGCC-
T ss_pred             --C-CCcCEEEECCCCcHHHHHHHH-HcCCEEE------------EEeccccccCc-------------CHHHHHHhcC-
Confidence              1 335689999999988643322 2221111            01110 00110             1345555443 


Q ss_pred             hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh----hhh
Q 010250          267 EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KAL  342 (514)
Q Consensus       267 ~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s----K~l  342 (514)
                         +++++|+  | ++..|...+    +++|.++|++||+++|+||+|+ +|..   +.....+..+|++++|    |++
T Consensus       123 ---~~~~~v~--~-~n~~G~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~---~~~~~~~~~~d~~~~S~~~~K~l  188 (373)
T 3frk_A          123 ---EKTKAII--A-VHLYGQPAD----MDEIKRIAKKYNLKLIEDAAQA-HGSL---YKGMKVGSLGDAAGFSFYPAKNL  188 (373)
T ss_dssp             ---TTEEEEE--E-ECCTTCCCC----HHHHHHHHHHHTCEEEEECTTC-TTCE---ETTEETTSSSSEEEEECCTTSSS
T ss_pred             ---CCCeEEE--E-ECCCcCccc----HHHHHHHHHHcCCEEEEECCcc-cCCE---ECCEeccccccEEEEeCcCCCcc
Confidence               3567777  3 345677665    9999999999999999999997 3221   2223445557888877    999


Q ss_pred             cC-CcccceeEEeC-HHHHHHhhhccCC-----CCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhh
Q 010250          343 SS-AYMPIGAILVS-PEVSEVIHSQSNT-----LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV  415 (514)
Q Consensus       343 ~g-G~~pig~v~~~-~~i~~~l~~~~~~-----~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L  415 (514)
                      ++ |  ..|+++++ +++.+.+......     ......++++..+++.++.+...++.++  ++.++.+++.+++++.|
T Consensus       189 ~~~g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~~--~~~~~~~~~~~~~~~~l  264 (373)
T 3frk_A          189 GSLG--DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLKYLD--KWNEERRKIAQKYIAGI  264 (373)
T ss_dssp             CCSS--SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHC
T ss_pred             Cccc--eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHh
Confidence            87 5  26777775 5566655431110     0111234556678888887777666543  46778888888888888


Q ss_pred             hhcc-CCCceeEEEeeee--eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-------------------
Q 010250          416 KAFS-DSPIIGEIRGTGL--ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------------------  473 (514)
Q Consensus       416 ~~l~-~~~~~~~v~g~g~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-------------------  473 (514)
                      +++. ..+.... .....  .+.+...              ....+.+.|.++||.+++..                   
T Consensus       265 ~~~~~~~~~~~~-~~~~~~~~~~~~~~--------------~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~  329 (373)
T 3frk_A          265 NNPNVIIPVEAD-YAKHVWYTFVIRSE--------------KRDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGN  329 (373)
T ss_dssp             CCTTEECCCCCT-TEECCCSSEEEEES--------------SHHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTS
T ss_pred             ccCceEeccCCC-CCceeeEEEEEEeC--------------CHHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCC
Confidence            7652 1110000 01111  1222221              14568899999999987422                   


Q ss_pred             ---------CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          474 ---------DNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       474 ---------~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                               ..||++....+|++||+++++.|+++..
T Consensus       330 ~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~  366 (373)
T 3frk_A          330 FPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKL  366 (373)
T ss_dssp             SHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC-
T ss_pred             CHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhh
Confidence                     4699999999999999999999987654

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=99.84  E-value=1.8e-20  Score=195.87  Aligned_cols=340  Identities=10%  Similarity=0.046  Sum_probs=198.7

Q ss_pred             CCCE-EEEccCCcccccCC-CCCHHHHHHHHHHHhcC----CccccccccCCchHHHHHHHHHHhcCcCC-----CCeEE
Q 010250           98 NGKK-YLDSLAGLWCTALG-GSEPRLVAAATAQLNTL----PFYHSFWNRTTKPSLDLAKELLEMFTASK-----MAKVF  166 (514)
Q Consensus        98 dG~~-ylD~~s~~~~~~lG-h~~p~v~~A~~~~l~~~----~~~~~~~~~~~~~~~ela~~L~~~~~~~~-----~~~v~  166 (514)
                      |++. .+||..|   .++. +++|.+.+++.+++..+    ......+. +.....++.+.+++++.+..     .++++
T Consensus        46 ~~~~~~i~l~~g---~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~-~~~G~~~lr~~ia~~l~g~~~~~~~~~~i~  121 (448)
T 3meb_A           46 DTNPKKVNLGVG---AYRDESGKPWILPAVKEAEAIISSDLSKYNKEYP-PVAGFPLFLEAAQFLMFGKDSKAAQEGRIA  121 (448)
T ss_dssp             CCCTTCEEESSC---CCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCC-CTTCCHHHHHHHHHHHHCTTCHHHHTTCEE
T ss_pred             CCCCCeEEeecc---cccCCCCCEechHHHHHHHHHHhhcccCCCCCCC-CCcchHHHHHHHHHHhcCCCccccCcCcEE
Confidence            4443 6888777   4433 34555555555552211    11111111 22234567777777652222     47899


Q ss_pred             E--eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee----ecCCCccccCCCCCCCCcccccCCCC--
Q 010250          167 F--TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA----SLSGLPALHQKFDLPAPFVLHTDCPH--  238 (514)
Q Consensus       167 ~--~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~----~~s~~~~~~~~~~~~~~~~~~~~~~~--  238 (514)
                      +  ++||++|++.++.+....      .++++|++.+++|++......    .. |...            ..+++.+  
T Consensus       122 ~~~t~ggt~al~l~~~~~~~~------~~gd~Vlv~~p~~~~~~~~~~~~~~~~-G~~v------------~~~~~~~~~  182 (448)
T 3meb_A          122 SCQSLSGTGSLHIGFEFLHLW------MPKAEFYMPSTTWPNHYGIYDKVFNKL-KVPY------------KEYTYLRKD  182 (448)
T ss_dssp             EEEESHHHHHHHHHHHHHHHH------CTTCCEEEESSCCTHHHHHHHHHHCTT-TSCC------------EEECCBCTT
T ss_pred             EEECCcHHHHHHHHHHHHHHh------CCCCEEEECCCCCHhHHHHHHhhHHhC-CCeE------------EEEeccccc
Confidence            9  999999999876654322      234689999999987643332    22 2111            1111100  


Q ss_pred             -cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc
Q 010250          239 -YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF  317 (514)
Q Consensus       239 -~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~  317 (514)
                       .|.             .+++++++.+.+.. ++..++++...++++|.+ ++.+.+++|.++|++||+++|+||+|.+|
T Consensus       183 ~~~~-------------~d~e~l~~~l~~~~-~~~~~v~~~~p~NPtG~~-~~~~~l~~i~~l~~~~~~~li~Deay~~~  247 (448)
T 3meb_A          183 GELE-------------IDFSNTKKDIQSAP-EKSIFLFHACAHNPSGID-FTEAQWKELLPIMKEKKHIAFFDSAYQGF  247 (448)
T ss_dssp             SCSS-------------BCHHHHHHHHHHSC-TTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEEESCTTT
T ss_pred             cCCC-------------cCHHHHHHHHHhCC-CCcEEEEeCCCCCCCCcC-CCHHHHHHHHHHHHHCCCEEEEecccccc
Confidence             011             01577888776532 334555555556677765 46688999999999999999999999998


Q ss_pred             ccccc---cceeccc-CCCCc---hhchhhhhcCCcccceeE--Ee--------C-H----HHHHHhhhccCCCCccccc
Q 010250          318 GRLGT---MFGCDKY-SIKPD---LVSFAKALSSAYMPIGAI--LV--------S-P----EVSEVIHSQSNTLGSFSHG  375 (514)
Q Consensus       318 gr~G~---~~~~~~~-gv~pD---iv~~sK~l~gG~~pig~v--~~--------~-~----~i~~~l~~~~~~~~~~~~~  375 (514)
                      +..+.   .+....+ +..++   +.+|||.++..++++|++  ++        + +    ++++.+..       ....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~-------~~~~  320 (448)
T 3meb_A          248 ATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTL-------QIRK  320 (448)
T ss_dssp             SSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHH-------HHHT
T ss_pred             cCCCcccCchhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHH-------HHhc
Confidence            76541   1222221 23345   336899887433899997  65        3 4    55555542       1122


Q ss_pred             CCCCCcHHHHHHHHHHHHHHh--------hccHHHHHHHHHHHHHhhhhhccCCCc------eeEEEeeee-eEEEEEcc
Q 010250          376 FTYSGHPVSCAVAIEALKIYK--------ERNIVEQVNKIAPKFQDGVKAFSDSPI------IGEIRGTGL-ILGTEFAD  440 (514)
Q Consensus       376 ~t~~~~pl~~aaa~aal~~~~--------~~~~~~~~~~~~~~l~~~L~~l~~~~~------~~~v~g~g~-~~~i~~~~  440 (514)
                      .+.+.+.+++.++.++|+...        -+++.++++++++++.+.|+++ ..+.      .......+. +..+.+. 
T Consensus       321 ~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~-  398 (448)
T 3meb_A          321 TWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKR-KTPGPGSKGTWDHILTAIGMFTFTGLT-  398 (448)
T ss_dssp             TTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCSTTTCCCTHHHHCCSSEEECCCC-
T ss_pred             ccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCcCcccccceeCCCceEEEecCCC-
Confidence            344556677777777664311        1345678888888898888875 1111      111112222 2222221 


Q ss_pred             CCCCCCCCCCccchHHHHHHHH-HHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          441 NKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       441 ~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                                    . .+...+ .++||++.++.  .||+.. .+++++|++++++|.+++++
T Consensus       399 --------------~-~~~~~ll~~~gV~v~~G~--gRis~a-~~~~~~i~~~~~~l~~~l~~  443 (448)
T 3meb_A          399 --------------P-EHVDYLKEKWSIYLVKAG--GRMSMC-GLTESNCDYVAEAIHDAVTK  443 (448)
T ss_dssp             --------------H-HHHHHHHHHHCEEECSGG--GEEEGG-GCCTTTHHHHHHHHHHHHHH
T ss_pred             --------------H-HHHHHHHHhCCEEEeCCC--cEEEEe-cCCHHHHHHHHHHHHHHHHh
Confidence                          1 233444 67799998743  288852 34788899999999998863

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=99.84  E-value=1.9e-19  Score=184.17  Aligned_cols=318  Identities=10%  Similarity=0.080  Sum_probs=199.2

Q ss_pred             CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEE
Q 010250          118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF  197 (514)
Q Consensus       118 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~i  197 (514)
                      .|++++++.++++...+.    ..+.+...++++.++++++   .++.++++||++|++.+++.+.      . ..+++|
T Consensus        16 ~~~~~~a~~~~l~~~~~~----~~~~~~~~~l~~~la~~~~---~~~~i~~~sGt~al~~~l~~l~------~-~~gd~V   81 (388)
T 1b9h_A           16 DDAERNGLVRALEQGQWW----RMGGDEVNSFEREFAAHHG---AAHALAVTNGTHALELALQVMG------V-GPGTEV   81 (388)
T ss_dssp             CHHHHHHHHHHHHTSCCB----TTTCSHHHHHHHHHHHHTT---CSEEEEESCHHHHHHHHHHHTT------C-CTTCEE
T ss_pred             CHHHHHHHHHHHHcCCee----ecCCHHHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHHcC------C-CCcCEE
Confidence            389999999999764221    1234567889999999984   3466777789999999998762      1 234689


Q ss_pred             EEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 010250          198 IARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFI  276 (514)
Q Consensus       198 i~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavi  276 (514)
                      |+.+++||+....... .|...            ..++... .|.             .++++|++.+.    +++++|+
T Consensus        82 i~~~~~~~~~~~~~~~-~g~~~------------~~v~~~~~~~~-------------~d~~~l~~~i~----~~~~~v~  131 (388)
T 1b9h_A           82 IVPAFTFISSSQAAQR-LGAVT------------VPVDVDAATYN-------------LDPEAVAAAVT----PRTKVIM  131 (388)
T ss_dssp             EEESSSCTHHHHHHHH-TTCEE------------EEECBCTTTCC-------------BCHHHHHHHCC----TTEEEEC
T ss_pred             EECCCccHHHHHHHHH-cCCEE------------EEEecCCCcCC-------------CCHHHHHHhcC----cCceEEE
Confidence            9999999987543222 22111            1111110 011             11467777663    3566666


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhchh--hhhcCCcccceeEE
Q 010250          277 AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAIL  353 (514)
Q Consensus       277 vEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~  353 (514)
                        |++. .|.+.+    +++|.++|++||+++|+||+|+ |+...|..  ...++ ..++.+||  |+++||  ++|+++
T Consensus       132 --~~n~-tG~~~~----l~~i~~la~~~~~~li~D~a~~~g~~~~~~~--~~~~~-~i~~~S~s~~K~l~g~--~~G~~~  199 (388)
T 1b9h_A          132 --PVHM-AGLMAD----MDALAKISADTGVPLLQDAAHAHGARWQGKR--VGELD-SIATFSFQNGKLMTAG--EGGAVV  199 (388)
T ss_dssp             --CBCG-GGCCCC----HHHHHHHHHHHTCCBCEECTTCTTCEETTEE--GGGSS-SCEEEECCTTSSSCSS--SCEEEE
T ss_pred             --EeCC-ccCcCC----HHHHHHHHHHcCCEEEEecchhcCCccCCee--ccccc-ceEEEEccCCCcccCC--CeEEEE
Confidence              5554 576765    9999999999999999999998 33333321  22222 12334555  788774  688899


Q ss_pred             eCHH-H--HHHhhhccCC-----CCcc---cccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCC
Q 010250          354 VSPE-V--SEVIHSQSNT-----LGSF---SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSP  422 (514)
Q Consensus       354 ~~~~-i--~~~l~~~~~~-----~~~~---~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~  422 (514)
                      ++++ +  ++.+......     ...+   ..++++..+++.++++.+.++.++  +..++.+++.+++.+.|+++....
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~--~~~~~~~~~~~~l~~~L~~~~~~~  277 (388)
T 1b9h_A          200 FPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLD--EQIAVRDERWTLLSRLLGAIDGVV  277 (388)
T ss_dssp             ECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHTSTTCE
T ss_pred             ECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccCCCcc
Confidence            8875 6  5655321100     0001   112334467777777666666554  356777888889988888752221


Q ss_pred             ceeE----EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-------------------------
Q 010250          423 IIGE----IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------------------------  473 (514)
Q Consensus       423 ~~~~----v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-------------------------  473 (514)
                      ....    .+..+.++.+.+....         ......+.+.|.++||.++++.                         
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (388)
T 1b9h_A          278 PQGGDVRADRNSHYMAMFRIPGLT---------EERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARR  348 (388)
T ss_dssp             ECCCCTTCCBCCCSEEEEECTTCC---------HHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHT
T ss_pred             ccCCCcCCCccceEEEEEEeCCcC---------cccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccC
Confidence            1110    0123567777765310         0014568889999999997431                         


Q ss_pred             ---------CEEEEeCCCCC-CHHHHHHHHHHHHHHHHH
Q 010250          474 ---------DNIMMSPPFIM-SPEEVDELISKYGKALKA  502 (514)
Q Consensus       474 ---------~~iRi~p~~~~-t~e~id~~~~~l~~~l~~  502 (514)
                               ..|||+....+ |++||+++++.|++++++
T Consensus       349 ~~~~~~~~~~~l~l~~~~~~~t~edi~~~~~~l~~~~~~  387 (388)
T 1b9h_A          349 CPNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR  387 (388)
T ss_dssp             CHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhCeEEecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence                     14888877778 999999999999988754

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.84  E-value=4.3e-20  Score=188.30  Aligned_cols=323  Identities=13%  Similarity=0.069  Sum_probs=201.8

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc---CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCC
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA---SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPN  193 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~---~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~  193 (514)
                      -+|+|++|+.+.+...  ++..   ......++.+++++.+..   .+.++++|++||++|++.+++.+...    ..+ 
T Consensus        16 ~~~~v~~a~~~~~~~~--~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~----~~~-   85 (385)
T 2bkw_A           16 LSGAVQKALDVPSLGH--TSPE---FVSIFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILS----KAP-   85 (385)
T ss_dssp             CCHHHHHTTSCCCCCT--TSHH---HHHHHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCT----TCS-
T ss_pred             chHHHHHHHhcccccc--CCHH---HHHHHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhcc----CCC-
Confidence            3577777765544321  1100   112345677778877742   12478999999999999999876200    013 


Q ss_pred             ccEEEEE-ecCCcccceeeeecCCCccccCCCCCCCCcccccCC-CCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCc
Q 010250          194 KKKFIAR-QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC-PHYWRYAHPGETEEEYSTRLANNLEDLILKEGPET  271 (514)
Q Consensus       194 ~~~ii~~-~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~  271 (514)
                      +++||++ .+.||......+...|..            +..++. +..++             .++++|++++.+   ++
T Consensus        86 gd~vlv~~~~~~~~~~~~~~~~~g~~------------~~~v~~~~~~~~-------------~d~~~l~~~l~~---~~  137 (385)
T 2bkw_A           86 NKNVLVVSTGTFSDRFADCLRSYGAQ------------VDVVRPLKIGES-------------VPLELITEKLSQ---NS  137 (385)
T ss_dssp             CCEEEEECSSHHHHHHHHHHHHTTCE------------EEEECCSSTTSC-------------CCHHHHHHHHHH---SC
T ss_pred             CCeEEEEcCCcchHHHHHHHHHcCCc------------eEEEecCCCCCC-------------CCHHHHHHHHhc---CC
Confidence            3577777 445666432222222211            111222 11111             115778888764   24


Q ss_pred             EEEEEEccccCCCCcccCChhHHHHHHHHHHhc--CCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcc
Q 010250          272 IAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY--DILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYM  347 (514)
Q Consensus       272 ~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~--gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~  347 (514)
                      +++|+++++++++|.+.+    +++|.++|++|  |+++|+||+|+ +|..  .+...  ...+|+++  ++|+++|+ .
T Consensus       138 ~~~v~~~~~~nptG~~~~----l~~i~~~~~~~~~~~~li~D~a~~-~~~~--~~~~~--~~~~d~~~~s~~K~~~~~-~  207 (385)
T 2bkw_A          138 YGAVTVTHVDTSTAVLSD----LKAISQAIKQTSPETFFVVDAVCS-IGCE--EFEFD--EWGVDFALTASQKAIGAP-A  207 (385)
T ss_dssp             CSEEEEESEETTTTEECC----HHHHHHHHHHHCTTSEEEEECTTT-TTTS--CCCTT--TTTCSEEEEESSSTTCCC-S
T ss_pred             CCEEEEEccCCCcCeEcC----HHHHHHHHHhhCCCCEEEEECccc-cCCc--ccccc--ccCceEEEecCccccccC-C
Confidence            668888999999999887    99999999999  99999999997 4432  12222  23467775  46998875 4


Q ss_pred             cceeEEeCHHHHH-Hhhhc----cCCC-----------Ccccc--cC-CCCCcHHHHHHHHHHHHHHhhc---cHHHHHH
Q 010250          348 PIGAILVSPEVSE-VIHSQ----SNTL-----------GSFSH--GF-TYSGHPVSCAVAIEALKIYKER---NIVEQVN  405 (514)
Q Consensus       348 pig~v~~~~~i~~-~l~~~----~~~~-----------~~~~~--~~-t~~~~pl~~aaa~aal~~~~~~---~~~~~~~  405 (514)
                      ++|++++++++++ .+...    ....           ..+..  +. .+..++.+++++.++++.+.+.   ++.++++
T Consensus       208 G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~  287 (385)
T 2bkw_A          208 GLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHR  287 (385)
T ss_dssp             CEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             cceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence            6799999998877 54210    0000           00111  11 1356778888888888877543   4578888


Q ss_pred             HHHHHHHhhh-hhccCCCceeEE--E-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee------CCE
Q 010250          406 KIAPKFQDGV-KAFSDSPIIGEI--R-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------GDN  475 (514)
Q Consensus       406 ~~~~~l~~~L-~~l~~~~~~~~v--~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------g~~  475 (514)
                      ++++++.+.| +++ ...+....  . ..+.++.+.+.+              ...+.+.|.++||.+.++      .+.
T Consensus       288 ~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~l~~~gi~v~~g~~~~~~~~~  352 (385)
T 2bkw_A          288 EMSDWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYVAD--------------PPDVIAFLKSHGVVIAGGIHKDIGPKY  352 (385)
T ss_dssp             HHHHHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEECSC--------------HHHHHHHHHHTTEECBCCCCTTTGGGE
T ss_pred             HHHHHHHHHHHHhc-CceecccCcccccCCceEEEecCC--------------HHHHHHHHHHCCeEEeCCCCcccCCCE
Confidence            8999999999 765 22211100  0 235666776532              345778888999999864      246


Q ss_pred             EEEe-CC---CCCCHHHHHHHHHHHHHHHHH
Q 010250          476 IMMS-PP---FIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       476 iRi~-p~---~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +|++ .+   +.+|++|+++++++|++++++
T Consensus       353 iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~  383 (385)
T 2bkw_A          353 IRIGHMGVTACNKNLPYMKNCFDLIKLALQR  383 (385)
T ss_dssp             EEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred             EEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence            9999 43   357999999999999988753

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=99.84  E-value=7.1e-21  Score=196.38  Aligned_cols=333  Identities=13%  Similarity=0.097  Sum_probs=203.0

Q ss_pred             CEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC-----CCeEEE--eCCh
Q 010250          100 KKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK-----MAKVFF--TNSG  171 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~-----~~~v~~--~~sG  171 (514)
                      ..+|||.+|   .+++. ++|.+.+++.++.....+.+    .+.....++.+.+++++.+..     .+++.+  +++|
T Consensus        41 ~~~i~l~~g---~~~d~~~~~~v~~a~~~a~~~~~~~y----~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g  113 (409)
T 4eu1_A           41 KRKVNLSIG---VYRDDADQPFVLECVKQATLGTNMDY----APVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGG  113 (409)
T ss_dssp             SSCEECCCS---SCCCTTSCCCCCHHHHTCCCCSCCCC----CCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHH
T ss_pred             cCceeeeee---EEECCCCCEeecHHHHhcCccccccC----CCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccc
Confidence            457899887   55443 67888888887733222111    122333577777777652222     456754  9999


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCCCCCh
Q 010250          172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHPGETE  249 (514)
Q Consensus       172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  249 (514)
                      ++|++.+..+++.+.     .++++|++.+++|++........ |....            .++.  ++.|.        
T Consensus       114 ~ga~~~~~~~~~~~~-----~~gd~Vlv~~p~y~~~~~~~~~~-g~~~~------------~~~~~~~~~~~--------  167 (409)
T 4eu1_A          114 TGALRIGGDLLNRFV-----ANCNRIYGPDVGYPNHESIFAKA-GMELT------------PYSYYDPATKG--------  167 (409)
T ss_dssp             HHHHHHHHHHGGGTS-----SSCCEEEEESSCCTHHHHHHHHT-TCEEE------------EECCEETTTTE--------
T ss_pred             hHHHHHHHHHHHHhc-----CCCCEEEEeCCCcHhHHHHHHHc-CCeEE------------EEEeecCcCCc--------
Confidence            999999877654321     23478999999998764333222 21111            1111  00011        


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc---ccee
Q 010250          250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT---MFGC  326 (514)
Q Consensus       250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~---~~~~  326 (514)
                           .++++|++.+.+.. ++.+++++...++++|.+. +.+.+++|.++|++||+++|+||+|.+|+..+.   ....
T Consensus       168 -----~d~~~l~~~l~~~~-~~~~~i~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~  240 (409)
T 4eu1_A          168 -----LNLAGMLECLDKAP-EGSVILVHACAHNPTGVDP-THDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVP  240 (409)
T ss_dssp             -----ECHHHHHHHHHHSC-TTCEEEEESSSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHH
T ss_pred             -----CcHHHHHHHHHhCC-CCcEEEEECCCCCCCCCCC-CHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHH
Confidence                 12578888876532 3445555444466666544 567899999999999999999999998876552   1222


Q ss_pred             -cccCCCCchh---chhhhhcCCcccceeE---EeCHH----HHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250          327 -DKYSIKPDLV---SFAKALSSAYMPIGAI---LVSPE----VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY  395 (514)
Q Consensus       327 -~~~gv~pDiv---~~sK~l~gG~~pig~v---~~~~~----i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~  395 (514)
                       ...+..++++   +|||.++..++++|++   +++++    +++.+..       .....+++.+++++.++.++|+..
T Consensus       241 ~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~  313 (409)
T 4eu1_A          241 RHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLAL-------LIRPMYNNPPLYGAWVVSSILKDP  313 (409)
T ss_dssp             HHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHH-------HHHHHHSSCCHHHHHHHHHHHHCH
T ss_pred             HHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHH-------HHhhhcCCCChHHHHHHHHHhCCH
Confidence             2224456654   6899987433899995   56777    5555442       122345566788888888877632


Q ss_pred             -------h-hccHHHHHHHHHHHHHhhhhhccCCCc-eeEEEeeeeeEEE-EEccCCCCCCCCCCccchHHHHHHHHH-H
Q 010250          396 -------K-ERNIVEQVNKIAPKFQDGVKAFSDSPI-IGEIRGTGLILGT-EFADNKSPNEPFPPEWGIGAYFGAQCE-K  464 (514)
Q Consensus       396 -------~-~~~~~~~~~~~~~~l~~~L~~l~~~~~-~~~v~g~g~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~l~-~  464 (514)
                             + .++..++++++.+++.+.|+++ ..+. +......|.++.+ .+.               .+ +...++ +
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~---------------~~-~~~~ll~~  376 (409)
T 4eu1_A          314 QLTALWKKELKQMSSRIAEVRKRLVSELKAC-GSVHDWSHIERQVGMMAYTGLT---------------RE-QVELLRSE  376 (409)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCSCCHHHHHSCSSEEECCCC---------------HH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCCCcceecCCceEEEEeCCC---------------HH-HHHHHHHc
Confidence                   1 2356778888889999988875 1111 1111223333322 111               12 344554 6


Q ss_pred             CCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          465 HGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       465 ~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      +||++.+++   ||+.. ..++++|++++++|++++
T Consensus       377 ~gv~v~p~~---Ri~~~-~~~~~~i~~~~~~l~~~l  408 (409)
T 4eu1_A          377 YHIYMTLNG---RAAVS-GLNSTNVEYVSQAIHNVT  408 (409)
T ss_dssp             HCEECCTTC---EEEGG-GCCTTTHHHHHHHHHHHH
T ss_pred             CCEEEcCCC---EEEEE-ecCHhhHHHHHHHHHHHh
Confidence            799998753   66653 467788999999998775

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=99.84  E-value=3.9e-19  Score=188.33  Aligned_cols=344  Identities=13%  Similarity=0.093  Sum_probs=205.9

Q ss_pred             CCHHHHHHHHHHHhcCCc----cccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCC
Q 010250          117 SEPRLVAAATAQLNTLPF----YHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGR  191 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~----~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~  191 (514)
                      -++++++++.+++.....    .+....+..+....+++.+.+..+ +.+.+++++++||++|+..+++...       .
T Consensus       107 ~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~-------~  179 (500)
T 3tcm_A          107 FSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLI-------R  179 (500)
T ss_dssp             SCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHC-------C
T ss_pred             CCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHc-------C
Confidence            577788888888876421    111112233444445555544432 2356799999999999999998762       0


Q ss_pred             CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHHHHHHHHHHHHHHHh--
Q 010250          192 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYSTRLANNLEDLILKE--  267 (514)
Q Consensus       192 ~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~le~li~~~--  267 (514)
                      ..++.|++.+++|++........+....             .+++.  ..|.             .++++|++.+.+.  
T Consensus       180 ~~gd~Vlv~~p~y~~~~~~~~~~g~~~~-------------~~~~~~~~~~~-------------~d~~~l~~~l~~~~~  233 (500)
T 3tcm_A          180 NEKDGILVPIPQYPLYSASIALHGGALV-------------PYYLNESTGWG-------------LETSDVKKQLEDARS  233 (500)
T ss_dssp             STTEEEEEEESCCTHHHHHHHHTTCEEE-------------EEECBTTTTSB-------------CCHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHhHHHHHHHcCCEEE-------------EEecccccCCC-------------CCHHHHHHHHHHHHh
Confidence            1346899999999887544333222111             11110  0011             1257788877642  


Q ss_pred             CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc-cc-ee----cccCC-CC--c-hh-
Q 010250          268 GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT-MF-GC----DKYSI-KP--D-LV-  336 (514)
Q Consensus       268 ~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~-~~-~~----~~~gv-~p--D-iv-  336 (514)
                      ...++.+|++...++++|.+. +.+.+++|.++|++||+++|+||+|.++...+. .+ .+    ..++. ..  + ++ 
T Consensus       234 ~~~~~k~ivl~~p~NPtG~~~-s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~  312 (500)
T 3tcm_A          234 RGINVRALVVINPGNPTGQVL-AEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSY  312 (500)
T ss_dssp             TTCEEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEE
T ss_pred             cCCCceEEEEECCCCCCcccC-CHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEE
Confidence            112454544444466667554 567899999999999999999999997644321 11 11    12222 12  2 33 


Q ss_pred             -chhhhh-cCCcccceeEEe---CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHH-----------HHhh-cc
Q 010250          337 -SFAKAL-SSAYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK-----------IYKE-RN  399 (514)
Q Consensus       337 -~~sK~l-~gG~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~-----------~~~~-~~  399 (514)
                       +|||++ +-.++++|++++   ++++++.+...        ...+++.++++++++..+++           ..++ +.
T Consensus       313 ~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~  384 (500)
T 3tcm_A          313 QSVSKGYYGECGKRGGYFEITGFSAPVREQIYKI--------ASVNLCSNITGQILASLVMNPPKASDESYASYKAEKDG  384 (500)
T ss_dssp             EESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHH--------HHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHHHHH
T ss_pred             ecCCccCCCCCccceEEEEEeCCCHHHHHHHHHH--------HhcccCCCHHHHHHHHHHhcCccccchhHHHHHHHHHH
Confidence             789998 322289999998   88998888641        12345667777777777664           2222 35


Q ss_pred             HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeE-EEEEccCCCCCCCC-CCccchHHHH-HHHHHHCCcEEEee----
Q 010250          400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLIL-GTEFADNKSPNEPF-PPEWGIGAYF-GAQCEKHGMLVRVS----  472 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~-~i~~~~~~~~~~~~-~~~~~~~~~~-~~~l~~~Gv~~~~~----  472 (514)
                      +.++++++++++.+.|+++   +.+......|.++ .+.+..+....... .........+ ...|.++||++.++    
T Consensus       385 ~~~~l~~~~~~l~~~L~~~---~g~~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~  461 (500)
T 3tcm_A          385 ILASLARRAKALEHAFNKL---EGITCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFG  461 (500)
T ss_dssp             HHHHHHHHHHHHHHHHHTS---TTEECCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTC
T ss_pred             HHHHHHHHHHHHHHHHhcC---CCcEEecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccC
Confidence            6778888889999988876   3333333344433 32332110000000 0000001223 35566789999864    


Q ss_pred             ---C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250          473 ---G-DNIMMSPPFIMSPEEVDELISKYGKALKATEERV  507 (514)
Q Consensus       473 ---g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~  507 (514)
                         + ..||++.  ..++++|++++++|.++++++.++.
T Consensus       462 ~~~g~~~iRis~--~~~~e~i~~~i~~l~~~~~~~~~~~  498 (500)
T 3tcm_A          462 QVPGTWHFRCTI--LPQEDKIPAVISRFTVFHEAFMSEY  498 (500)
T ss_dssp             CCTTCCBEEEES--CSCTTTHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEEE--CCCHHHHHHHHHHHHHHHHHHHHHh
Confidence               1 3599995  4899999999999999998877654

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=99.83  E-value=2.5e-19  Score=180.90  Aligned_cols=317  Identities=13%  Similarity=0.050  Sum_probs=200.2

Q ss_pred             CCHHHHHHHHHHHhcCC--ccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCc
Q 010250          117 SEPRLVAAATAQLNTLP--FYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK  194 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~--~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~  194 (514)
                      -+|++++++.+.+....  .++. .....+...++.++++++++..+.+++++++||++|+..+++...         +.
T Consensus        15 ~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~---------~~   84 (362)
T 3ffr_A           15 LYPTVRQHMITALDEKIGVISHR-SKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCV---------EK   84 (362)
T ss_dssp             CCTTHHHHHHHHHHTTTTTSCTT-SHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHC---------SS
T ss_pred             CCHHHHHHHHHHhcCCccCcCCC-CHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhcc---------CC
Confidence            47899999988876533  1111 111224556788888888754345789999999999999998762         23


Q ss_pred             cEEEEEecCCccccee-eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEE
Q 010250          195 KKFIARQKSYHGSTLI-AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIA  273 (514)
Q Consensus       195 ~~ii~~~~~yHG~t~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~a  273 (514)
                       ++++....+++.... .....|...            ..++.+..+..             ++++|+     . .+++.
T Consensus        85 -~~i~~~~~~~~~~~~~~~~~~g~~~------------~~v~~~~~~~~-------------d~~~l~-----~-~~~~~  132 (362)
T 3ffr_A           85 -KSFHCVNGSFSKRFYEFAGELGREA------------YKEEAAFGKGF-------------YPADIT-----V-PADAE  132 (362)
T ss_dssp             -EEEEEECSHHHHHHHHHHHHTTCEE------------EEEECCTTCCC-------------CGGGCC-----C-CTTCC
T ss_pred             -cEEEEcCcHHHHHHHHHHHHhCCCe------------EEEecCCCCCC-------------CHHHHh-----c-cCCcc
Confidence             666666666663211 111112111            11111111110             023444     1 24567


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHhc-CCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCcccce
Q 010250          274 AFIAEPVIGAGGVIPPPATYFEKVQAVVKKY-DILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIG  350 (514)
Q Consensus       274 avivEpv~~~~G~~~p~~~~L~~l~~l~~~~-gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig  350 (514)
                      +|+++++++.+|.+.+    +++|.++|++| |+++|+||+|+ +|...    .+...  .|+++  ++|.++++ ..+|
T Consensus       133 ~v~~~~~~nptG~~~~----l~~i~~la~~~p~~~li~D~a~~-~~~~~----~~~~~--~d~~~~s~~K~~~~~-~G~g  200 (362)
T 3ffr_A          133 IICLTHNETSSGVSMP----VEDINTFRDKNKDALIFVDAVSS-LPYPK----FDWTK--IDSVFFSVQKCFGLP-AGLG  200 (362)
T ss_dssp             EEEEESEETTTTEECC----HHHHTTSGGGSTTSEEEEECTTT-TTSSC----CCTTS--CSEEEEETTSTTCCC-SCCE
T ss_pred             EEEEEcCCCCcceeCC----HHHHHHHHHhCCCCEEEEecccc-cCCcc----cChhH--CcEEEEecccccCCC-CceE
Confidence            7778888888998887    99999999999 99999999987 32211    11111  67765  56999854 4568


Q ss_pred             eEEeCHHHHHHhhhccC--CCCcc-----------cccC-CCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHh
Q 010250          351 AILVSPEVSEVIHSQSN--TLGSF-----------SHGF-TYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQD  413 (514)
Q Consensus       351 ~v~~~~~i~~~l~~~~~--~~~~~-----------~~~~-t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~  413 (514)
                      ++++++++++.+.....  ....+           ..+. .++.+..++.++.++++.+.+   +++.++.+++.+++.+
T Consensus       201 ~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~  280 (362)
T 3ffr_A          201 VWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINT  280 (362)
T ss_dssp             EEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             EEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence            88999998877754210  00000           0011 344566677777788886654   3467778888888888


Q ss_pred             hhhhccCCCcee--EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCH
Q 010250          414 GVKAFSDSPIIG--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSP  486 (514)
Q Consensus       414 ~L~~l~~~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~  486 (514)
                      .|+++.......  .....+.++.+.+.+ .            ...+.+.|.++||.+.++     ++.||+++....++
T Consensus       281 ~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~------------~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~~~~~~  347 (362)
T 3ffr_A          281 YIESSKVFSFGVEDAKLRSMTTIVANTTM-L------------PGEINKILEPFDMAVGAGYGSKKETQIRIANFPAHSL  347 (362)
T ss_dssp             HHHHCSSEEESSSCGGGBCSSEEEEEESS-C------------HHHHHHHHGGGTEEEEECSGGGTTTEEEEECCTTSCH
T ss_pred             HHHHccCceeccCChhhcCCceEEEecCC-C------------HHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCH
Confidence            888762211111  001124456666653 1            456888999999999863     35799999888999


Q ss_pred             HHHHHHHHHHHHHH
Q 010250          487 EEVDELISKYGKAL  500 (514)
Q Consensus       487 e~id~~~~~l~~~l  500 (514)
                      +++++++++|++.+
T Consensus       348 e~i~~l~~~l~~~~  361 (362)
T 3ffr_A          348 EQVHKLVQTLKEKI  361 (362)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999998754

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.83  E-value=2.7e-20  Score=188.27  Aligned_cols=312  Identities=12%  Similarity=0.030  Sum_probs=187.5

Q ss_pred             CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEE
Q 010250          118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF  197 (514)
Q Consensus       118 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~i  197 (514)
                      +|+|++|+.+.+...     . .++.+...+++++++++++   .+..++++||++|++.+++.+...       ++..+
T Consensus        28 ~p~v~~ai~~~~~~~-----~-~~~~~~~~~l~~~la~~~~---~~~~i~~~~g~~a~~~a~~~~~~~-------g~~~v   91 (359)
T 3pj0_A           28 LTEALQNIDDNLESD-----I-YGNGAVIEDFETKIAKILG---KQSAVFFPSGTMAQQIALRIWADR-------KENRR   91 (359)
T ss_dssp             HHHHTTTSCTTCBCC-----B-TTBSHHHHHHHHHHHHHHT---CSEEEEESCHHHHHHHHHHHHHHH-------HTCCE
T ss_pred             CHHHHHHHHhhcccC-----c-ccCCHHHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHHHhc-------CCCcE
Confidence            577777776643321     1 1244567899999999873   355677899999999999987532       23346


Q ss_pred             EEEecCCccccee--ee-ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEE
Q 010250          198 IARQKSYHGSTLI--AA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAA  274 (514)
Q Consensus       198 i~~~~~yHG~t~~--~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aa  274 (514)
                      |+.++.+|.....  .. ...|....            .++.+ .+.             .++++|+++     .+++++
T Consensus        92 vi~~~~~~~~~~~~~~~~~~~g~~~~------------~v~~~-~~~-------------~d~~~l~~~-----~~~~~~  140 (359)
T 3pj0_A           92 VAYHPLSHLEIHEQDGLKELQQITPL------------LLGTA-NQL-------------LTIDDIKSL-----REPVSS  140 (359)
T ss_dssp             EEECTTCHHHHSSTTHHHHHHCCEEE------------ECSCT-TSC-------------CCHHHHHTC-----SSCCSE
T ss_pred             EEEeccceeeehhcchHHHhcCceEE------------ecCCc-CCC-------------cCHHHHHhc-----cCCceE
Confidence            6666666654321  11 11121110            11111 000             014556554     246778


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcc--cccccceecccCCCCchh--chhhhhcCCcccce
Q 010250          275 FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFG--RLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIG  350 (514)
Q Consensus       275 vivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~g--r~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig  350 (514)
                      |++++.+++.|...++.+++++|.++|++||++||+||++..+.  ..|..  ...+....|++  +++|+++++ .. |
T Consensus       141 v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~--~~~~~~~~d~~~~s~sK~~~~~-~g-g  216 (359)
T 3pj0_A          141 VLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKS--AEEICALFDSVYVSFYKGIGGI-AG-A  216 (359)
T ss_dssp             EEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCC--HHHHHTTCSEEEEESSSTTCCS-SC-E
T ss_pred             EEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCC--HHHhhccCCEEEEeccccCCCc-ce-E
Confidence            88887766553345677899999999999999999999986221  11111  11111234665  788998875 23 6


Q ss_pred             eEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEE--E
Q 010250          351 AILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI--R  428 (514)
Q Consensus       351 ~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v--~  428 (514)
                      ++++++++++.+....    ....+.++..++.+ +++.++++...  +..++..++++++.+.|+++   +.+...  .
T Consensus       217 ~~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~-~a~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~---~g~~~~~~~  286 (359)
T 3pj0_A          217 ILAGNDDFVQEAKIWK----RRYGGDLISLYPYI-LSADYYFEKRI--GKMAEYFEAAKGLAERFNSC---SGVKTVPEV  286 (359)
T ss_dssp             EEEECHHHHHHHHHHH----HHTTCCCSCCHHHH-HHHHHHHHHHG--GGHHHHHHHHHHHHHHHHTS---TTEEEESSS
T ss_pred             EEECCHHHHHHHHHHH----HHhCCCcchhHHHH-HHHHHHHHHHH--HHhHHHHHHHHHHHHHHhhC---CCceeeccC
Confidence            7788999998876310    11122334444444 44446666442  34556778888888888875   222211  2


Q ss_pred             eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-------CEEEEeCC---CCCCHHHHHHHHHHHHH
Q 010250          429 GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------DNIMMSPP---FIMSPEEVDELISKYGK  498 (514)
Q Consensus       429 g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-------~~iRi~p~---~~~t~e~id~~~~~l~~  498 (514)
                      ..+.++.+.+....         ......+.+.|.++||++.++.       ..+|++..   ...+.+++++++++|.+
T Consensus       287 ~~~~~~~~~~~~~~---------~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~  357 (359)
T 3pj0_A          287 PVSNMFHVYFENSA---------DEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEK  357 (359)
T ss_dssp             CSSSEEEEEESSCH---------HHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHH
T ss_pred             CcceEEEEEecCcc---------chhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHh
Confidence            34455666664321         0114567888999999988642       34888643   34689999999999876


Q ss_pred             H
Q 010250          499 A  499 (514)
Q Consensus       499 ~  499 (514)
                      +
T Consensus       358 ~  358 (359)
T 3pj0_A          358 E  358 (359)
T ss_dssp             H
T ss_pred             c
Confidence            5

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.83  E-value=1.7e-19  Score=183.31  Aligned_cols=312  Identities=15%  Similarity=0.150  Sum_probs=196.7

Q ss_pred             ccCCCCCHHH----HHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHh
Q 010250          112 TALGGSEPRL----VAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN  187 (514)
Q Consensus       112 ~~lGh~~p~v----~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~  187 (514)
                      ..+|+++|.+    .+++.+++....      ..+.+...++++.++++++   .+++++++||++|++.|++.+.    
T Consensus         5 ~~~~~~~~~~~~~v~~a~~~~~~~~~------~~~~~~~~~l~~~la~~~~---~~~~~~~~sGt~al~~al~~~~----   71 (367)
T 3nyt_A            5 IDLKNQQARIKDKIDAGIQRVLRHGQ------YILGPEVTELEDRLADFVG---AKYCISCANGTDALQIVQMALG----   71 (367)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHCC------CSSCHHHHHHHHHHHHHHT---CSEEEEESCHHHHHHHHHHHTT----
T ss_pred             ccccccccccCHHHHHHHHHHHhcCC------ccCChHHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHhC----
Confidence            3456666554    455555544331      1244667899999999983   4589999999999999998772    


Q ss_pred             hcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHH
Q 010250          188 ALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILK  266 (514)
Q Consensus       188 ~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~  266 (514)
                        . .++++|++..++|++........+..+.             .++.. +.|..             +++++++.+. 
T Consensus        72 --~-~~gd~Vi~~~~~~~~~~~~~~~~G~~~~-------------~~~~~~~~~~~-------------d~~~l~~~i~-  121 (367)
T 3nyt_A           72 --V-GPGDEVITPGFTYVATAETVALLGAKPV-------------YVDIDPRTYNL-------------DPQLLEAAIT-  121 (367)
T ss_dssp             --C-CTTCEEEEESSSCTHHHHHHHHTTCEEE-------------EECBCTTTCSB-------------CGGGTGGGCC-
T ss_pred             --C-CCcCEEEECCCccHHHHHHHHHcCCEEE-------------EEecCCccCCc-------------CHHHHHHhcC-
Confidence              1 3356899999998886544332222111             11111 00110             1345555552 


Q ss_pred             hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhchh----hh
Q 010250          267 EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSFA----KA  341 (514)
Q Consensus       267 ~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~s----K~  341 (514)
                         +++++|++++   ..|...+    +++|.++|++||+++|+||+|+ |....|+     ..+...|++++|    |.
T Consensus       122 ---~~~~~v~~~~---~~G~~~~----~~~i~~la~~~~~~li~D~a~~~g~~~~~~-----~~~~~~di~~~Sf~~~K~  186 (367)
T 3nyt_A          122 ---PRTKAIIPVS---LYGQCAD----FDAINAIASKYGIPVIEDAAQSFGASYKGK-----RSCNLSTVACTSFFPSAP  186 (367)
T ss_dssp             ---TTEEEECCBC---GGGCCCC----HHHHHHHHHHTTCCBEEECTTTTTCEETTE-----ETTSSSSEEEEECCTTSS
T ss_pred             ---cCCcEEEeeC---CccChhh----HHHHHHHHHHcCCEEEEECccccCCeECCe-----eccCCCCEEEEECCCCCc
Confidence               4677877443   3455554    9999999999999999999997 3322232     222223888776    99


Q ss_pred             hcC-CcccceeEEe-CHHHHHHhhhccCC-----CCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhh
Q 010250          342 LSS-AYMPIGAILV-SPEVSEVIHSQSNT-----LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDG  414 (514)
Q Consensus       342 l~g-G~~pig~v~~-~~~i~~~l~~~~~~-----~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~  414 (514)
                      +++ | . .|++++ ++++++.+......     ......++++..+++.++++++.++.++  ++.++.+++.+++++.
T Consensus       187 l~~~g-~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~--~~~~~~~~~~~~~~~~  262 (367)
T 3nyt_A          187 LGCYG-D-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIFE--EEIALRQKVAAEYDLS  262 (367)
T ss_dssp             SCCSS-C-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHH
T ss_pred             CCCcC-c-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence            988 6 3 677777 57787776542110     0001224677889999999998888663  4677888888999999


Q ss_pred             hhhcc-CCCcee-EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC-------------------
Q 010250          415 VKAFS-DSPIIG-EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG-------------------  473 (514)
Q Consensus       415 L~~l~-~~~~~~-~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-------------------  473 (514)
                      |+++. ..+... .......++.+.+.+              .+.+.+.|.++||.+++..                   
T Consensus       263 L~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~  328 (367)
T 3nyt_A          263 LKQVGIGTPFIEVNNISVYAQYTVRMDN--------------RESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPV  328 (367)
T ss_dssp             HHHTTCCCCCCCTTEECCCSSEEEECSS--------------HHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHH
T ss_pred             hccCCeeccCCCCCCceeeEEEEEEeCC--------------HHHHHHHHHHCCCceeccCCCccccChhhhccCCCChH
Confidence            98761 112111 111111223333221              4567889999999876321                   


Q ss_pred             ------CEEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250          474 ------DNIMMSPPFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       474 ------~~iRi~p~~~~t~e~id~~~~~l~~~  499 (514)
                            ..||+......|++||+++++.|++.
T Consensus       329 ~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~  360 (367)
T 3nyt_A          329 GDKAATQVMSLPMHPYLDTASIKIICAALTNL  360 (367)
T ss_dssp             HHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred             HHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence                  25888888889999999999988754

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.83  E-value=6e-20  Score=189.76  Aligned_cols=287  Identities=14%  Similarity=0.093  Sum_probs=180.4

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee---cCCCc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS---LSGLP  218 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~---~s~~~  218 (514)
                      ..+...+++++|+++++   .+.+++++||++|++.+++.+.        ..+++||+.++.||+.......   ..|..
T Consensus        79 ~~p~~~~l~~~la~~~g---~~~~~~~~sG~~Ai~~al~~l~--------~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~  147 (414)
T 3ndn_A           79 GNPTVSVFEERLRLIEG---APAAFATASGMAAVFTSLGALL--------GAGDRLVAARSLFGSCFVVCSEILPRWGVQ  147 (414)
T ss_dssp             CCHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHHTTC--------CTTCEEEEESCCCHHHHHHHHTHHHHTTCE
T ss_pred             CChHHHHHHHHHHHHHC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEcCCccchHHHHHHHHHHHcCcE
Confidence            45677899999999873   4689999999999999998653        3457899999999985322111   01111


Q ss_pred             cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ  298 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~  298 (514)
                                  +..++..                  ++++|++.+.    +++++|++|++++++|.+.+    +++|+
T Consensus       148 ------------~~~v~~~------------------d~~~l~~ai~----~~t~~v~le~p~NptG~~~~----l~~i~  189 (414)
T 3ndn_A          148 ------------TVFVDGD------------------DLSQWERALS----VPTQAVFFETPSNPMQSLVD----IAAVT  189 (414)
T ss_dssp             ------------EEEECTT------------------CHHHHHHHTS----SCCSEEEEESSCTTTCCCCC----HHHHH
T ss_pred             ------------EEEeCCC------------------CHHHHHHhcC----CCCeEEEEECCCCCCCcccc----HHHHH
Confidence                        1111111                  1467777664    35778999999999998876    99999


Q ss_pred             HHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCc-ccceeEEeCHHHHH-HhhhccCCCCcccccC
Q 010250          299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAY-MPIGAILVSPEVSE-VIHSQSNTLGSFSHGF  376 (514)
Q Consensus       299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~-~pig~v~~~~~i~~-~l~~~~~~~~~~~~~~  376 (514)
                      ++|++||+++|+||+|+ .|.   .+....+|....+.+++|.+++++ .++|+++++++.+. .+...     ...++.
T Consensus       190 ~la~~~g~~livDe~~~-~~~---~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~-----~~~~g~  260 (414)
T 3ndn_A          190 ELAHAAGAKVVLDNVFA-TPL---LQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKL-----MRHTGP  260 (414)
T ss_dssp             HHHHHTTCEEEEECTTT-HHH---HCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHH-----HHHHCC
T ss_pred             HHHHHcCCEEEEECCCc-ccc---cCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHH-----HHHcCC
Confidence            99999999999999997 222   222224455334446889998843 78899999988765 44421     012222


Q ss_pred             CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCce----------eEEEeeeeeEEEEEccC
Q 010250          377 TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPII----------GEIRGTGLILGTEFADN  441 (514)
Q Consensus       377 t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~----------~~v~g~g~~~~i~~~~~  441 (514)
                      +  .+|..++.++..++.+..  ..++..++.+.+.+.|++..     .+|..          ...+|.|.++++++...
T Consensus       261 ~--~~~~~a~~~~~~l~~l~~--r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~  336 (414)
T 3ndn_A          261 A--MSAFNAWVLLKGLETLAI--RVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCP  336 (414)
T ss_dssp             C--CCHHHHHHHHHHGGGHHH--HHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSC
T ss_pred             C--CCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCC
Confidence            2  367777777766665432  34555666666666665431     11111          11356789999999642


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHCCcEEEee----------------------------CCEEEEeCCCCCCHHHHHHHH
Q 010250          442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------------------------GDNIMMSPPFIMSPEEVDELI  493 (514)
Q Consensus       442 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------------------g~~iRi~p~~~~t~e~id~~~  493 (514)
                      ..      .....+..|...|...++.+..+                            .+.||++.    ..|+++.++
T Consensus       337 ~~------~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsv----G~e~~~dli  406 (414)
T 3ndn_A          337 ED------VAKQRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISV----GLEDTDDLI  406 (414)
T ss_dssp             GG------GHHHHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEEC----CSSCHHHHH
T ss_pred             cc------ccHHHHHHHHHhCccceEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEe----CcCCHHHHH
Confidence            00      00012344555555444333211                            24688884    346677777


Q ss_pred             HHHHHHH
Q 010250          494 SKYGKAL  500 (514)
Q Consensus       494 ~~l~~~l  500 (514)
                      +.|+++|
T Consensus       407 ~dl~~al  413 (414)
T 3ndn_A          407 ADIDRAL  413 (414)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhh
Confidence            7777765

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=99.83  E-value=1.4e-19  Score=186.58  Aligned_cols=281  Identities=15%  Similarity=0.124  Sum_probs=184.1

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccccee---eeecCCCcc
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI---AASLSGLPA  219 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~---~~~~s~~~~  219 (514)
                      .+...++++.++++++   .+++++++||++|+..+++...        ..+++|++.++.|++....   .....|...
T Consensus        61 ~~~~~~l~~~ia~~~g---~~~~i~~~~g~~ai~~~~~~l~--------~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~  129 (404)
T 1e5e_A           61 NPTVSNLEGKIAFLEK---TEACVATSSGMGAIAATVLTIL--------KAGDHLISDECLYGCTHALFEHALTKFGIQV  129 (404)
T ss_dssp             CHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHHHHC--------CTTCEEEEESCCCHHHHHHHHTHHHHTTCEE
T ss_pred             ChHHHHHHHHHHHHhC---CCcEEEeCChHHHHHHHHHHHh--------CCCCEEEEeCCCchhHHHHHHHHHHHcCCEE
Confidence            4556689999999873   3589999999999999998653        2346899999999875321   111122111


Q ss_pred             ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 010250          220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA  299 (514)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~  299 (514)
                                  ..++..                  +.++|++.+.    +++++|+++.+++++|.+.+    +++|.+
T Consensus       130 ------------~~v~~~------------------d~~~l~~~i~----~~t~~v~l~~p~NptG~v~~----l~~i~~  171 (404)
T 1e5e_A          130 ------------DFINTA------------------IPGEVKKHMK----PNTKIVYFETPANPTLKIID----MERVCK  171 (404)
T ss_dssp             ------------EEECTT------------------STTHHHHHCC----TTEEEEEEESSCTTTCCCCC----HHHHHH
T ss_pred             ------------EEECCC------------------CHHHHHHhcC----CCCcEEEEECCCCCCCcccC----HHHHHH
Confidence                        111110                  1356666653    46889999999999998886    999999


Q ss_pred             HHHh-cCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccc-eeEEeCHHHHH-HhhhccCCCCcccc
Q 010250          300 VVKK-YDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPI-GAILVSPEVSE-VIHSQSNTLGSFSH  374 (514)
Q Consensus       300 l~~~-~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pi-g~v~~~~~i~~-~l~~~~~~~~~~~~  374 (514)
                      +|++ ||+++|+||+|+++... ...  + +  ..|++  +++|.++++++++ |++++++++++ .+...       ..
T Consensus       172 la~~~~~~~li~De~~~~~~~~-~~~--~-~--~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~~-------~~  238 (404)
T 1e5e_A          172 DAHSQEGVLVIADNTFCSPMIT-NPV--D-F--GVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVG-------IK  238 (404)
T ss_dssp             HHHTSTTCEEEEECTTTCTTTC-CGG--G-G--TCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTC-------CC
T ss_pred             HHHhhcCCEEEEECCCchhhhC-Ccc--c-c--CCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHHH-------HH
Confidence            9999 99999999999965321 221  2 2  35665  6889999866887 99999999887 77631       22


Q ss_pred             cC-CCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-----------cCCCcee----EEEeeeeeEEEEE
Q 010250          375 GF-TYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-----------SDSPIIG----EIRGTGLILGTEF  438 (514)
Q Consensus       375 ~~-t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-----------~~~~~~~----~v~g~g~~~~i~~  438 (514)
                      .. +...+++++.++.++++.+.  ...++..++.+.+.+.|++.           ..+|.+.    ..++.|.++.+++
T Consensus       239 ~~~g~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~  316 (404)
T 1e5e_A          239 DITGSVISPHDAWLITRGLSTLN--IRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFIL  316 (404)
T ss_dssp             CCCCCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEE
T ss_pred             hCCCCCCCHHHHHHHHHhHhHHH--HHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEe
Confidence            22 34578888888888887542  12333334444444444322           1111111    1235588888877


Q ss_pred             ccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe---e----------------------------CCEEEEeCCCCCCHH
Q 010250          439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV---S----------------------------GDNIMMSPPFIMSPE  487 (514)
Q Consensus       439 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~---~----------------------------g~~iRi~p~~~~t~e  487 (514)
                      .+.             .....+.+.+.|+++..   +                            .+.|||++..    |
T Consensus       317 ~~~-------------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~----e  379 (404)
T 1e5e_A          317 KSG-------------FEGAKKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI----E  379 (404)
T ss_dssp             TTH-------------HHHHHHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS----S
T ss_pred             CCC-------------HHHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC----C
Confidence            531             12344566677875442   1                            2569999765    8


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 010250          488 EVDELISKYGKALKATE  504 (514)
Q Consensus       488 ~id~~~~~l~~~l~~~~  504 (514)
                      +++++++.|+++++.+.
T Consensus       380 ~~~~li~~l~~al~~~~  396 (404)
T 1e5e_A          380 DADELIADFKQGLDALL  396 (404)
T ss_dssp             CHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHH
Confidence            99999999999887543

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.83  E-value=4.6e-19  Score=182.01  Aligned_cols=326  Identities=12%  Similarity=0.103  Sum_probs=201.3

Q ss_pred             CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEE
Q 010250          118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF  197 (514)
Q Consensus       118 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~i  197 (514)
                      +|++.+++.+.++.. ++    ....+...++++.|+++++   .+++++++||++|++.+++.+.      . .++++|
T Consensus        11 ~~~v~~a~~~~~~~~-~~----~~~g~~~~~l~~~la~~~~---~~~v~~~~ggt~al~~~~~~l~------~-~~gd~V   75 (394)
T 1o69_A           11 GGNELKYIEEVFKSN-YI----APLGEFVNRFEQSVKDYSK---SENALALNSATAALHLALRVAG------V-KQDDIV   75 (394)
T ss_dssp             -CCHHHHHHHHHHHT-TT----SCTTHHHHHHHHHHHHHHC---CSEEEEESCHHHHHHHHHHHTT------C-CTTCEE
T ss_pred             CHHHHHHHHHHHHcC-Cc----cCCChHHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHcC------C-CCCCEE
Confidence            467888988888652 11    1012446789999999983   4789999999999999998761      1 335689


Q ss_pred             EEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEE
Q 010250          198 IARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIA  277 (514)
Q Consensus       198 i~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aaviv  277 (514)
                      ++.+++|++....... .|...            ..++....|.             .++++|++.+.+.. +++++|++
T Consensus        76 l~~~~~~~~~~~~~~~-~g~~~------------~~v~~~~~~~-------------~d~~~l~~~i~~~~-~~~~~v~~  128 (394)
T 1o69_A           76 LASSFTFIASVAPICY-LKAKP------------VFIDCDETYN-------------IDVDLLKLAIKECE-KKPKALIL  128 (394)
T ss_dssp             EEESSSCGGGTHHHHH-TTCEE------------EEECBCTTSS-------------BCHHHHHHHHHHCS-SCCCEEEE
T ss_pred             EECCCccHHHHHHHHH-cCCEE------------EEEEeCCCCC-------------cCHHHHHHHHhccc-CCceEEEE
Confidence            9999999987543332 22111            1111111111             11577888776421 24677777


Q ss_pred             ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhch--hhhhcCCcccceeEEe
Q 010250          278 EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSF--AKALSSAYMPIGAILV  354 (514)
Q Consensus       278 Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG~~pig~v~~  354 (514)
                      ++.   .|...+    +++|.++|++||+++|+||+|+ |+...|.... . ++ ..|+.++  +|.+++  ..+|++++
T Consensus       129 ~~~---~G~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~-~-~~-~~~~~s~s~~K~l~~--~~~G~~~~  196 (394)
T 1o69_A          129 THL---YGNAAK----MDEIVEICKENDIVLIEDAAEALGSFYKNKALG-T-FG-EFGVYSYNGNKIITT--SGGGMLIG  196 (394)
T ss_dssp             ECG---GGCCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETTEETT-S-SS-SEEEEECCTTSSSCC--SSCEEEEE
T ss_pred             ECC---CCChhh----HHHHHHHHHHcCCEEEEECcCcccceeCCcccc-c-cc-CcEEEEEeCCccCCC--CCceEEEE
Confidence            763   454444    9999999999999999999998 6654443211 1 11 3577788  577875  46999999


Q ss_pred             C-HHHHHHhhhccCCC-------CcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeE
Q 010250          355 S-PEVSEVIHSQSNTL-------GSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGE  426 (514)
Q Consensus       355 ~-~~i~~~l~~~~~~~-------~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~  426 (514)
                      + +++++.+.......       .....+..+..+++.++.+++.++.+++  ..++.+++.+++.+.|+++  ..+...
T Consensus       197 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~~--~~~~~~~~~~~l~~~L~~~--~~~~~~  272 (394)
T 1o69_A          197 KNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQ--RVLKKREIYEWYKEFLGEY--FSFLDE  272 (394)
T ss_dssp             SCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHTTT--EECCCC
T ss_pred             CCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhccc--ccccCC
Confidence            5 78888775421110       0011223334577888877776665543  6788888899999988764  111111


Q ss_pred             EE--eeee-eEEEEEccCC---CCC-----CCCCC--ccchHHHHHHHHHHCCcEEEeeC--------------------
Q 010250          427 IR--GTGL-ILGTEFADNK---SPN-----EPFPP--EWGIGAYFGAQCEKHGMLVRVSG--------------------  473 (514)
Q Consensus       427 v~--g~g~-~~~i~~~~~~---~~~-----~~~~~--~~~~~~~~~~~l~~~Gv~~~~~g--------------------  473 (514)
                      ..  ..+. ++.+.+....   ...     ..+..  .......+.+.|.++||.+++..                    
T Consensus       273 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~  352 (394)
T 1o69_A          273 LENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNS  352 (394)
T ss_dssp             CTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHH
T ss_pred             CCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHH
Confidence            00  0121 3556654210   000     00000  00124568889999999987541                    


Q ss_pred             -----CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          474 -----DNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       474 -----~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                           ..+++.....+|++|+++++++|+++++
T Consensus       353 ~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~  385 (394)
T 1o69_A          353 ELFFQKGICLPSGTAMSKDDVYEISKLILKSIK  385 (394)
T ss_dssp             HHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred             HHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHh
Confidence                 2345555667999999999999988764

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.83  E-value=1.3e-19  Score=187.82  Aligned_cols=240  Identities=15%  Similarity=0.086  Sum_probs=159.8

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee---ecCCCc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLP  218 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~---~~s~~~  218 (514)
                      ..+...+++++|+++++   .+..++++||++|++.+++.++        ..+++||+..+.||+......   ...|..
T Consensus        56 ~~~~~~~l~~~la~~~g---~~~~v~~~sGt~A~~~~l~~~~--------~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~  124 (421)
T 2ctz_A           56 MNPTVDVLEKRLAALEG---GKAALATASGHAAQFLALTTLA--------QAGDNIVSTPNLYGGTFNQFKVTLKRLGIE  124 (421)
T ss_dssp             BCHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHHHHC--------CTTCEEEECSCCCHHHHHHHHTHHHHTTCE
T ss_pred             CChHHHHHHHHHHHHhC---CCceEEecCHHHHHHHHHHHHh--------CCCCEEEEeCCCchHHHHHHHHHHHHcCCE
Confidence            34567889999999984   3467888999999999998763        345789999999998654321   111211


Q ss_pred             cccCCCCCCCCccccc-CCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHH
Q 010250          219 ALHQKFDLPAPFVLHT-DCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKV  297 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l  297 (514)
                      .            ..+ +..                  +.+++++.+.    +++++|++|++++++|.+.+    +++|
T Consensus       125 ~------------~~~~~~~------------------d~~~l~~~i~----~~~~~v~~~~~~n~~G~~~~----l~~i  166 (421)
T 2ctz_A          125 V------------RFTSREE------------------RPEEFLALTD----EKTRAWWVESIGNPALNIPD----LEAL  166 (421)
T ss_dssp             E------------EECCTTC------------------CHHHHHHHCC----TTEEEEEEESSCTTTCCCCC----HHHH
T ss_pred             E------------EEECCCC------------------CHHHHHHhhc----cCCeEEEEECCCCCCCcccC----HHHH
Confidence            1            111 110                  1467777664    46899999999999998887    9999


Q ss_pred             HHHHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccceeEEeC---HHH----HHHhhhccC-
Q 010250          298 QAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILVS---PEV----SEVIHSQSN-  367 (514)
Q Consensus       298 ~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~~---~~i----~~~l~~~~~-  367 (514)
                      .++|++||+++|+||+|+++|..+..+     +..+|++  +++|.+++++.++|++++.   +++    .+.+.+... 
T Consensus       167 ~~~a~~~g~~livD~~~~~~g~~~~~~-----~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g  241 (421)
T 2ctz_A          167 AQAAREKGVALIVDNTFGMGGYLLRPL-----AWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPG  241 (421)
T ss_dssp             HHHHHHHTCEEEEECGGGGGGTSCCGG-----GGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGG
T ss_pred             HHHHHHcCCEEEEECCcccccccCCcc-----ccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccch
Confidence            999999999999999996677655433     3457988  6889999855788887774   222    222321000 


Q ss_pred             CCCc----------------c--cccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEE--
Q 010250          368 TLGS----------------F--SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI--  427 (514)
Q Consensus       368 ~~~~----------------~--~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v--  427 (514)
                      ..+.                +  ..+.....+|+.++++...++.+.+  ..++..++.+++.+.|++.   |.+..+  
T Consensus       242 ~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~--r~~~~~~~a~~l~~~L~~~---p~v~~v~~  316 (421)
T 2ctz_A          242 YHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSL--RAERHVENTLHLAHWLLEQ---PQVAWVNY  316 (421)
T ss_dssp             GTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTC---TTEEEEEC
T ss_pred             hhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcchHHH--HHHHHHHhHHHHHHHHHhC---CCeeEEEC
Confidence            0000                0  0112235678888888887776532  2445556777777777664   333322  


Q ss_pred             -----------------EeeeeeEEEEEcc
Q 010250          428 -----------------RGTGLILGTEFAD  440 (514)
Q Consensus       428 -----------------~g~g~~~~i~~~~  440 (514)
                                       ++.|.++.|++..
T Consensus       317 p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~  346 (421)
T 2ctz_A          317 PGLPHHPHHDRAQKYFKGKPGAVLTFGLKG  346 (421)
T ss_dssp             TTSTTCTTHHHHHHHHTTCCCSEEEEEETT
T ss_pred             CCCCCCCCHHHHHHhccCCCceEEEEEeCC
Confidence                             4778899999864

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.82  E-value=1.3e-19  Score=186.31  Aligned_cols=233  Identities=15%  Similarity=0.147  Sum_probs=157.6

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec----CCC
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL----SGL  217 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~----s~~  217 (514)
                      .++...+|+++|+++.+   .+.+++++||++|++++++++         ..+++||+.++.|||........    .+.
T Consensus        65 ~~p~~~~l~~~la~l~g---~~~~~~~~sG~~Ai~~~~~l~---------~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~  132 (400)
T 3nmy_A           65 HNPTRFAYERCVAALEG---GTRAFAFASGMAATSTVMELL---------DAGSHVVAMDDLYGGTFRLFERVRRRTAGL  132 (400)
T ss_dssp             CCHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHTTS---------CTTCEEEEESSCCHHHHHHHHHTHHHHHCC
T ss_pred             CCHHHHHHHHHHHHHhC---CCCEEEecCHHHHHHHHHHHc---------CCCCEEEEeCCCchHHHHHHHHhhHhhcCe
Confidence            45667889999999873   358999999999999854433         23468999999998754222111    111


Q ss_pred             ccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHH
Q 010250          218 PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKV  297 (514)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l  297 (514)
                      .            +..++..                  +.+++++.+.    +++++|++|++++++|.+.+    +++|
T Consensus       133 ~------------~~~v~~~------------------d~~~l~~~i~----~~~~~v~~e~~~np~G~~~~----l~~i  174 (400)
T 3nmy_A          133 D------------FSFVDLT------------------DPAAFKAAIR----ADTKMVWIETPTNPMLKLVD----IAAI  174 (400)
T ss_dssp             E------------EEEECTT------------------SHHHHHHHCC----TTEEEEEEESSCTTTCCCCC----HHHH
T ss_pred             E------------EEEECCC------------------CHHHHHHHhc----cCCCEEEEECCCCCCCeeec----HHHH
Confidence            1            1111111                  1466776664    47899999999999999886    9999


Q ss_pred             HHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCccccee--EEe-CHHHHHHhhhccCCCCcccc
Q 010250          298 QAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGA--ILV-SPEVSEVIHSQSNTLGSFSH  374 (514)
Q Consensus       298 ~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~--v~~-~~~i~~~l~~~~~~~~~~~~  374 (514)
                      +++|++||+++|+||+|+.. ...   ....+|.++.+.+++|.++|++.++|+  ++. ++++.+.+..       ..+
T Consensus       175 ~~la~~~g~~livDe~~~~~-~~~---~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~-------~~~  243 (400)
T 3nmy_A          175 AVIARKHGLLTVVDNTFASP-MLQ---RPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAF-------LQN  243 (400)
T ss_dssp             HHHHHHTTCEEEEECTTTHH-HHC---CGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHH-------HHH
T ss_pred             HHHHHHcCCEEEEECCCccc-ccC---ChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHH-------HHH
Confidence            99999999999999999621 111   112234433344589999986567766  443 6778777753       233


Q ss_pred             cCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEE------------------EeeeeeEEE
Q 010250          375 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEI------------------RGTGLILGT  436 (514)
Q Consensus       375 ~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v------------------~g~g~~~~i  436 (514)
                      ..+...+|+.++.++..++.+..  ..++..++.+.+.+.|++.   |.+..+                  +|.|.+++|
T Consensus       244 ~~g~~~~~~~a~~~l~~l~~l~~--r~~~~~~~a~~l~~~L~~~---p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~  318 (400)
T 3nmy_A          244 SIGGVQGPFDSFLALRGLKTLPL--RMRAHCENALALAQWLETH---PAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSI  318 (400)
T ss_dssp             HHCCBCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHTTC---TTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEE
T ss_pred             hcCCCCCHHHHHHHHHhHhHHHH--HHHHHHHHHHHHHHHHHcC---CCEeEEECCCCCCCcCHHHHHHhCCCCCceEEE
Confidence            34566789888888887776532  3455666667777666543   445544                  778999999


Q ss_pred             EEcc
Q 010250          437 EFAD  440 (514)
Q Consensus       437 ~~~~  440 (514)
                      ++..
T Consensus       319 ~l~~  322 (400)
T 3nmy_A          319 VLKG  322 (400)
T ss_dssp             EETT
T ss_pred             EeCC
Confidence            9964

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=99.82  E-value=1.4e-19  Score=184.60  Aligned_cols=323  Identities=14%  Similarity=0.060  Sum_probs=187.8

Q ss_pred             CCC-EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHH
Q 010250           98 NGK-KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAND  176 (514)
Q Consensus        98 dG~-~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~  176 (514)
                      .|+ .++|+..+-+   --.-+|++++++.    ..       ..+.....++++.++++++....+++++++||++|++
T Consensus        25 ~g~~~v~~~~~~~~---~~~~~~~v~~a~~----~~-------~~~~~~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~   90 (374)
T 2aeu_A           25 KGRDALYDLSGLSG---GFLIDEKDKALLN----TY-------IGSSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAIL   90 (374)
T ss_dssp             TCGGGCEECSSCCC---CCCCCHHHHHHHT----ST-------THHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHH
T ss_pred             cCccceeeecccCC---CCCCCHHHHHHHH----Hh-------cCchHHHHHHHHHHHHHhCCCCcceEEEEcChHHHHH
Confidence            354 4667654421   1124677887775    11       1122334567777777764212378999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccce--eeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL--IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~--~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      .+++.+         + +++||+.+++||+...  ......|...            ..+                    
T Consensus        91 ~~~~~~---------~-gd~Vl~~~~~y~~~~~~~~~~~~~g~~~------------~~v--------------------  128 (374)
T 2aeu_A           91 ATILAL---------K-PKKVIHYLPELPGHPSIERSCKIVNAKY------------FES--------------------  128 (374)
T ss_dssp             HHHHHH---------C-CSEEEEECSSSSCCTHHHHHHHHTTCEE------------EEE--------------------
T ss_pred             HHHHhC---------C-CCEEEEecCCCCccHHHHHHHHHcCcEE------------EEe--------------------
Confidence            999854         2 4689999999998532  1111112111            000                    


Q ss_pred             HHHHHHHHHHHHhCCCcEEE-EEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCC
Q 010250          255 RLANNLEDLILKEGPETIAA-FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP  333 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aa-vivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~p  333 (514)
                      .+.+++++.    . +++++ |+++++++++|.   +...+++|.++|++||+++|+||++..+ ..|...........+
T Consensus       129 ~d~~~l~~~----~-~~~~~~v~~~~p~nptG~---~~~~l~~i~~l~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~  199 (374)
T 2aeu_A          129 DKVGEILNK----I-DKDTLVIITGSTMDLKVI---ELENFKKVINTAKNKEAIVFVDDASGAR-VRLLFNQPPALKLGA  199 (374)
T ss_dssp             SCHHHHHTT----C-CTTEEEEEECBCTTSCBC---CHHHHHHHHHHHHHHTCCEEEECTTHHH-HHHHTTCCCHHHHTC
T ss_pred             CCHHHHHhc----C-CCccEEEEEccCCCCCCC---CcccHHHHHHHHHHcCCEEEEECCcccc-cccccccCCccccCC
Confidence            013566554    2 35677 888988888884   3355999999999999999999988633 211111000112246


Q ss_pred             chh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHH
Q 010250          334 DLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKF  411 (514)
Q Consensus       334 Div--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l  411 (514)
                      |++  +++|.|+|  +++|++++++++++.+...       ......+.+++.++++.++|+.+..+ ..++..++.+.+
T Consensus       200 di~~~S~sK~l~g--~~~G~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~  269 (374)
T 2aeu_A          200 DLVVTSTDKLMEG--PRGGLLAGKKELVDKIYIE-------GTKFGLEAQPPLLAGIYRALKNFNLE-RIRKAFERAKNF  269 (374)
T ss_dssp             SEEEEETTSSSSS--CSCEEEEEEHHHHHHHHHH-------HHTTTCBCCHHHHHHHHHHHHHCCHH-HHHHHHHHHHHC
T ss_pred             cEEEecCcccccC--cceEEEEECHHHHHHHHHh-------hccccCCCCHHHHHHHHHHHHHHhHH-HHHHHHHHHHHH
Confidence            877  48899875  6899999999999888642       11122356788999999998865321 233333333333


Q ss_pred             ----Hhhhhh-ccCC----CceeEEEeeeeeEEEE-EccCCCCCCCCCCccchHHHHH-HHHHHCCcEEEee------CC
Q 010250          412 ----QDGVKA-FSDS----PIIGEIRGTGLILGTE-FADNKSPNEPFPPEWGIGAYFG-AQCEKHGMLVRVS------GD  474 (514)
Q Consensus       412 ----~~~L~~-l~~~----~~~~~v~g~g~~~~i~-~~~~~~~~~~~~~~~~~~~~~~-~~l~~~Gv~~~~~------g~  474 (514)
                          ++.|.+ +...    ++.....+.|.++... +....        .......++ ..+.++||++.++      .+
T Consensus       270 ~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~  341 (374)
T 2aeu_A          270 DLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVYKDDTI--------NIKKLIEIGFNLLKNYGIITITVAGMPGASK  341 (374)
T ss_dssp             CCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEESSHHH--------HHHHHHHHHHHHHHHHCEECSTTSSSCSSCC
T ss_pred             HHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeecccccc--------cccchHHHHHHHHHhCCEEEecCCCCCCCCC
Confidence                344432 1111    1221234556554432 11000        000011244 4455789998764      23


Q ss_pred             EEEEeCCC-CCCHHHHHHHHHHHHHHHHHH
Q 010250          475 NIMMSPPF-IMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       475 ~iRi~p~~-~~t~e~id~~~~~l~~~l~~~  503 (514)
                      .+||+++. ..++++++++++.|+++++++
T Consensus       342 ~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~  371 (374)
T 2aeu_A          342 SLRIDLTSRDAERIDDNYIIKAIVESIKMA  371 (374)
T ss_dssp             SEEEETTSGGGGGSCHHHHHHHHHHHHHHH
T ss_pred             eEEEEcCCchHHHHHHHHHHHHHHHHHHHH
Confidence            69999753 233344788888887777654

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.81  E-value=1.9e-18  Score=178.77  Aligned_cols=322  Identities=12%  Similarity=0.112  Sum_probs=196.3

Q ss_pred             CHHHHHHHHHHHhcCCcc-ccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccE
Q 010250          118 EPRLVAAATAQLNTLPFY-HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK  196 (514)
Q Consensus       118 ~p~v~~A~~~~l~~~~~~-~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~  196 (514)
                      +|++++++.+++++.... +....+..+...+++++++++++   .+++++++||++|++.+++.+.      . ..+++
T Consensus        15 ~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g---~~~~i~~~~gt~al~~~~~~~~------~-~~gd~   84 (418)
T 2c81_A           15 SDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNG---VPYCVPTTSGSTALMLALEALG------I-GEGDE   84 (418)
T ss_dssp             CHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHT---CSEEEEESCHHHHHHHHHHHTT------C-CTTCE
T ss_pred             CHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHcC------C-CCcCE
Confidence            689999999999764322 11112344557899999999873   3478899999999999998762      1 23468


Q ss_pred             EEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250          197 FIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF  275 (514)
Q Consensus       197 ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav  275 (514)
                      |++.+++|++....... .|....            .++... .|.             .++++|++.+.    +++++|
T Consensus        85 Vl~~~~~~~~~~~~~~~-~g~~~~------------~~~~~~~~~~-------------~d~~~l~~~i~----~~~~~v  134 (418)
T 2c81_A           85 VIVPSLTWIATATAVLN-VNALPV------------FVDVEADTYC-------------IDPQLIKSAIT----DKTKAI  134 (418)
T ss_dssp             EEEESSSCTHHHHHHHH-TTCEEE------------EECBCTTTCS-------------BCHHHHGGGCC----TTEEEE
T ss_pred             EEECCCccHhHHHHHHH-cCCEEE------------EEecCCCCCC-------------cCHHHHHHhhC----CCCeEE
Confidence            99999999987543322 221110            111110 011             01456665553    357777


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc-ccccceecccCCCCchh--ch--hhhhcCCcccce
Q 010250          276 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR-LGTMFGCDKYSIKPDLV--SF--AKALSSAYMPIG  350 (514)
Q Consensus       276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr-~G~~~~~~~~gv~pDiv--~~--sK~l~gG~~pig  350 (514)
                      +++.   ..|...+    +++|.++|++||+++|+||+|+.+.. .|..     .+..+|++  +|  +|.+++|  ++|
T Consensus       135 ~~~~---~~G~~~~----~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~-----~~~~~~~~~~s~s~~K~~~~g--~~g  200 (418)
T 2c81_A          135 IPVH---LFGSMAN----MDEINEIAQEHNLFVIEDCAQSHGSVWNNQR-----AGTIGDIGAFSCQQGKVLTAG--EGG  200 (418)
T ss_dssp             CCBC---CTTCCCC----HHHHHHHHHHTTCEEEEECTTCTTCEETTEE-----TTSSSSEEEEECCTTSSSCSS--SCE
T ss_pred             EEeC---CcCCccc----HHHHHHHHHHCCCEEEEECcccccCccCCEe-----cccccceEEEeccCCcccCCC--CeE
Confidence            7654   3566554    99999999999999999999986532 2221     22223544  55  8999874  789


Q ss_pred             eEEeC-HHHHHHhhhccCCCC-----------ccc--------ccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Q 010250          351 AILVS-PEVSEVIHSQSNTLG-----------SFS--------HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPK  410 (514)
Q Consensus       351 ~v~~~-~~i~~~l~~~~~~~~-----------~~~--------~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~  410 (514)
                      +++++ +++++.+........           .+.        .+..+..+++.++.+...++.+  ++..++.+++.++
T Consensus       201 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~  278 (418)
T 2c81_A          201 IIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQEL--DDKNAIREKNAMF  278 (418)
T ss_dssp             EEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTTH--HHHHHHHHHHHHH
T ss_pred             EEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHHHH--HHHHHHHHHHHHH
Confidence            99984 787776653111000           011        1111223455554444444433  2456777777888


Q ss_pred             HHhhhhhccCCCceeEEEe--eee--eEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcE---EEee----------
Q 010250          411 FQDGVKAFSDSPIIGEIRG--TGL--ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GML---VRVS----------  472 (514)
Q Consensus       411 l~~~L~~l~~~~~~~~v~g--~g~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~---~~~~----------  472 (514)
                      +.+.|+++....+.....+  ...  ++.+.+.+.....       .....+.+.|.++ ||.   +++.          
T Consensus       279 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~  351 (418)
T 2c81_A          279 LNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVKFGG-------LNADQFCEILREKLNMGTFYLHPPYLPVHKNPLF  351 (418)
T ss_dssp             HHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGGTTT-------CCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTC
T ss_pred             HHHHhccCCCcccCCCCCCCcccccEEEEEEEccccccc-------cCHHHHHHHHHHcCCCCcccccccccccccCchh
Confidence            8888876522111111111  112  3445664310000       0145688899998 999   7642          


Q ss_pred             ---------------------C----------CEEEEeCCCCC-CHHHHHHHHHHHHHHHHH
Q 010250          473 ---------------------G----------DNIMMSPPFIM-SPEEVDELISKYGKALKA  502 (514)
Q Consensus       473 ---------------------g----------~~iRi~p~~~~-t~e~id~~~~~l~~~l~~  502 (514)
                                           +          +.||++++..+ |+|||++++++|++++++
T Consensus       352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~  413 (418)
T 2c81_A          352 CPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARK  413 (418)
T ss_dssp             CGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHT
T ss_pred             cccccccccccccccccccccCCChHHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHh
Confidence                                 1          36999999899 999999999999988764

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.81  E-value=3.9e-18  Score=174.68  Aligned_cols=323  Identities=15%  Similarity=0.153  Sum_probs=200.0

Q ss_pred             cccccCCC--CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHH
Q 010250          109 LWCTALGG--SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYN  186 (514)
Q Consensus       109 ~~~~~lGh--~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~  186 (514)
                      ++..+++.  -+|++++++.++++...++      +.+...++++.++++++   .+++++++||++|++.+++.++. .
T Consensus         3 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~------~~~~~~~l~~~la~~~~---~~~~i~~~sGt~a~~~al~~~~~-~   72 (390)
T 3b8x_A            3 MINYPLASSTWDDLEYKAIQSVLDSKMFT------MGEYVKQYETQFAKTFG---SKYAVMVSSGSTANLLMIAALFF-T   72 (390)
T ss_dssp             --CBCSCCCCCCHHHHHHHHHHHHHTCCS------SCHHHHHHHHHHHHHHT---CSEEEEESCHHHHHHHHHHHTTS-S
T ss_pred             ceeccCCCCCCCHHHHHHHHHHHHcCCCC------CChHHHHHHHHHHHHHC---CCcEEEECCHHHHHHHHHHHHHh-h
Confidence            34445664  3789999999998764221      34667889999999984   34799999999999999987631 0


Q ss_pred             hhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhHHHHHHHHHHHHHHH
Q 010250          187 NALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLANNLEDLIL  265 (514)
Q Consensus       187 ~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~li~  265 (514)
                      ...+..++++||+...+||+....... .|...            ..++... .|.             .++++|++.+.
T Consensus        73 ~~~~~~~g~~Vi~~~~~~~~~~~~~~~-~g~~~------------~~~~~~~~~~~-------------~d~~~l~~~i~  126 (390)
T 3b8x_A           73 KKPRLKKGDEIIVPAVSWSTTYYPLQQ-YGLRV------------KFVDIDINTLN-------------IDIESLKEAVT  126 (390)
T ss_dssp             SSCSCCTTCEEEEESSSCHHHHHHHHH-TTCEE------------EEECBCTTTCS-------------BCHHHHHHHCC
T ss_pred             hhcCCCCcCEEEECCCCcHHHHHHHHH-cCCEE------------EEEecCccccC-------------cCHHHHHHHhC
Confidence            000113356899999999987543332 22111            0111110 011             11467777664


Q ss_pred             HhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhh----h
Q 010250          266 KEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAK----A  341 (514)
Q Consensus       266 ~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK----~  341 (514)
                          +++++|++.+.   .|...+    +++|.++|++||+++|+||+|+ +|...   ....+|..+|+.+++|    .
T Consensus       127 ----~~~~~v~~~~~---~g~~~~----~~~i~~l~~~~~~~li~D~a~~-~g~~~---~~~~~g~~~~~~~~s~~~~k~  191 (390)
T 3b8x_A          127 ----DSTKAILTVNL---LGNPNN----FDEINKIIGGRDIILLEDNCES-MGATF---NNKCAGTFGLMGTFSSFYSNH  191 (390)
T ss_dssp             ----TTEEEEEEECG---GGCCCC----HHHHHHHHTTSCCEEEEECTTC-TTCEE---TTEETTSSSSEEEEECCTTSS
T ss_pred             ----cCCeEEEEECC---ccChhh----HHHHHHHHHHcCCEEEEECcCc-ccCEE---CCcccccccceEEEEccCCCC
Confidence                35666666432   244433    9999999999999999999998 32221   2245677788888775    4


Q ss_pred             hcCCcccceeEEeCH-HHHHHhhhccCCC--C-------------------cc---cccCCCCCcHHHHHHHHHHHHHHh
Q 010250          342 LSSAYMPIGAILVSP-EVSEVIHSQSNTL--G-------------------SF---SHGFTYSGHPVSCAVAIEALKIYK  396 (514)
Q Consensus       342 l~gG~~pig~v~~~~-~i~~~l~~~~~~~--~-------------------~~---~~~~t~~~~pl~~aaa~aal~~~~  396 (514)
                      +++|  ..|++++++ ++.+.+......-  +                   .+   ..|+++..+++.++++++.++.++
T Consensus       192 ~~~g--~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~  269 (390)
T 3b8x_A          192 IATM--EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQLKKLP  269 (390)
T ss_dssp             SCSS--SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHHHHHH
T ss_pred             CccC--CceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHHHHHH
Confidence            4332  247777775 6665543211000  0                   00   123445578899999988887664


Q ss_pred             hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeee--eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--
Q 010250          397 ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGL--ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--  472 (514)
Q Consensus       397 ~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--  472 (514)
                        +..++.+++.+++.+.|+++....+.... ..+.  .+.+.+..... .        ....+.+.|.++||.+++.  
T Consensus       270 --~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~-~--------~~~~l~~~L~~~gI~v~~~~~  337 (390)
T 3b8x_A          270 --RFISVRRKNAEYFLDKFKDHPYLDVQQET-GESSWFGFSFIIKKDSG-V--------IRKQLVENLNSAGIECRPIVT  337 (390)
T ss_dssp             --HHHHHHHHHHHHHHHHHTTCSSEEECCCC-SBCCCCEEEEEECTTSC-C--------CHHHHHHHHHHTTBCCBCSTT
T ss_pred             --HHHHHHHHHHHHHHHHhcCCCCcccCCCC-CCcccEEEEEEecCcCc-c--------cHHHHHHHHHHCCCCeeeecC
Confidence              56788888899999988765221111100 1222  24445542100 0        1456788899999987741  


Q ss_pred             -----C-----------------------CEEEEeCCCCCCHHHHHHHHHHH
Q 010250          473 -----G-----------------------DNIMMSPPFIMSPEEVDELISKY  496 (514)
Q Consensus       473 -----g-----------------------~~iRi~p~~~~t~e~id~~~~~l  496 (514)
                           .                       ..|||+....+|++||+++++.|
T Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~t~~di~~i~~~l  389 (390)
T 3b8x_A          338 GNFLKNTDVLKYFDYTVHNNVDNAEYLDKNGLFVGNHQIELFDEIDYLREVL  389 (390)
T ss_dssp             SSGGGCHHHHTTCEEEESSCCHHHHHHHHHEEEEECCSSCCHHHHHHHHHHT
T ss_pred             CchhhcchhhhcCCCCCcCCChHHHHHhcCEEEeeCCCCCCHHHHHHHHHhh
Confidence                 1                       14899999999999999999876

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=99.80  E-value=4.6e-18  Score=179.92  Aligned_cols=342  Identities=13%  Similarity=0.062  Sum_probs=203.0

Q ss_pred             CCHHHHHHHHHHHhcCC----ccccccccCCchHHHHHHHHHHhcC--cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcC
Q 010250          117 SEPRLVAAATAQLNTLP----FYHSFWNRTTKPSLDLAKELLEMFT--ASKMAKVFFTNSGSEANDTQVKLVWYYNNALG  190 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~----~~~~~~~~~~~~~~ela~~L~~~~~--~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~  190 (514)
                      .+.++.+++.+.+....    ..++...+..+....+++.+.+..+  +...+++++++|+++|+..++++..       
T Consensus       102 ~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~-------  174 (498)
T 3ihj_A          102 FPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILV-------  174 (498)
T ss_dssp             SCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHC-------
T ss_pred             CCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHc-------
Confidence            36677788877776532    1112122334455666666665532  1246899999999999999998763       


Q ss_pred             CCC---ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHHHHHHHHHHHHHH
Q 010250          191 RPN---KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYSTRLANNLEDLIL  265 (514)
Q Consensus       191 ~~~---~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~le~li~  265 (514)
                      .++   ++.|++..+.|.......... |....            .+++.  ..|.             .++++|++.+.
T Consensus       175 ~~gd~~~d~Vlv~~p~y~~~~~~~~~~-g~~~v------------~~~~~~~~~~~-------------~d~~~le~~l~  228 (498)
T 3ihj_A          175 SGGGKSRTGVMIPIPQYPLYSAVISEL-DAIQV------------NYYLDEENCWA-------------LNVNELRRAVQ  228 (498)
T ss_dssp             CCCGGGSEEEEEEESCCTHHHHHHHHT-TCEEE------------EEECBGGGTTB-------------CCHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCchhHHHHHHHc-CCEEE------------EeeccccccCC-------------CCHHHHHHHHH
Confidence            122   358999999998765333222 21111            01110  0111             11578888887


Q ss_pred             HhCCC-cEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--cceeccc--CCC------Cc
Q 010250          266 KEGPE-TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MFGCDKY--SIK------PD  334 (514)
Q Consensus       266 ~~~~~-~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--~~~~~~~--gv~------pD  334 (514)
                      ..... ++.+|++...++++|.+. +.+.+++|.++|++||+++|+||+|..+...+.  ...+...  +..      ..
T Consensus       229 ~~~~~~~~k~i~l~np~NPTG~v~-s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~  307 (498)
T 3ihj_A          229 EAKDHCDPKVLCIINPGNPTGQVQ-SRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVE  307 (498)
T ss_dssp             HHTTTSEEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCC
T ss_pred             hhhccCCCeEEEEECCCCCCCCcC-CHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCcee
Confidence            54222 355555555566677554 567899999999999999999999987644332  1111110  011      11


Q ss_pred             h---hchhhhhc--CCcccceeEE---eCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHH-----------HH
Q 010250          335 L---VSFAKALS--SAYMPIGAIL---VSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK-----------IY  395 (514)
Q Consensus       335 i---v~~sK~l~--gG~~pig~v~---~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~-----------~~  395 (514)
                      +   -+|||.+.  .| +++|+++   .++++++.+...        .....+.+.++++++.++++           .+
T Consensus       308 ~i~~~S~SK~~~G~~G-~R~G~~~~~~~~~~l~~~l~~~--------~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~  378 (498)
T 3ihj_A          308 LASFHSTSKGYMGECG-YRGGYMEVINLHPEIKGQLVKL--------LSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFS  378 (498)
T ss_dssp             EEEEEESSSSTTCCSS-SCCEEEEEESCCHHHHHHHHHH--------HHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHH
T ss_pred             EEEEeccccccccCcc-cceEEEEEecCCHHHHHHHHHH--------HhccCCCCHHHHHHHHHHhcCCccCcccHHHHH
Confidence            2   26899995  35 8999998   588998888641        12334556677666655552           22


Q ss_pred             hh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeee-EEEEEccCCCCCCCC-CCccchHHH-HHHHHHHCCcEEEe
Q 010250          396 KE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI-LGTEFADNKSPNEPF-PPEWGIGAY-FGAQCEKHGMLVRV  471 (514)
Q Consensus       396 ~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~-~~i~~~~~~~~~~~~-~~~~~~~~~-~~~~l~~~Gv~~~~  471 (514)
                      ++ +.+.++++++.+++.+.|+++   +.+......|.+ .++.+.......... ......... +...|.++||++.+
T Consensus       379 ~~~~~~~~~l~~~~~~l~~~L~~~---~g~~~~~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~p  455 (498)
T 3ihj_A          379 REKESVLGNLAKKAKLTEDLFNQV---PGIHCNPLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVP  455 (498)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTS---TTEECCCCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcC---CCcEecCCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEe
Confidence            22 345678888888898888875   333333334443 333443110000000 000001222 34556678999987


Q ss_pred             e-------C-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250          472 S-------G-DNIMMSPPFIMSPEEVDELISKYGKALKATEER  506 (514)
Q Consensus       472 ~-------g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~  506 (514)
                      +       + ..+|++  +..+++++++++++|.+++++..++
T Consensus       456 G~~f~~~~~~~~~Ris--~~~~~e~l~~~i~~L~~~~~~~~~~  496 (498)
T 3ihj_A          456 GSGFGQREGTYHFRMT--ILPPVEKLKTVLQKVKDFHINFLEK  496 (498)
T ss_dssp             GGGTCCCTTCCBEEEE--CCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcccCCCCCCCEEEEE--eCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            3       1 369999  4689999999999999999887654

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=99.80  E-value=7.8e-18  Score=179.02  Aligned_cols=328  Identities=14%  Similarity=0.079  Sum_probs=190.4

Q ss_pred             chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHh----hcCCCC-ccEEEEEecCCcccceeeeecCCCc
Q 010250          144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN----ALGRPN-KKKFIARQKSYHGSTLIAASLSGLP  218 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~----~~~~~~-~~~ii~~~~~yHG~t~~~~~~s~~~  218 (514)
                      ....++.++++++++. +.+.++|++|||||+..|++.++.+..    ..+..+ .+..|+.....|.+...+....|..
T Consensus       148 ~le~~~~~~la~l~g~-~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g  226 (515)
T 2jis_A          148 LMEEEVLRKLRALVGW-SSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLG  226 (515)
T ss_dssp             HHHHHHHHHHHHHHTC-SSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSC
T ss_pred             HHHHHHHHHHHHHhCC-CCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCCC
Confidence            3345667778888753 246899999999999999999875421    112100 1214444444566544433332221


Q ss_pred             cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEK  296 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~  296 (514)
                      .         ..+..++....++             .+.++|++.+.+.  ...++++|++...++..|.+.|    +++
T Consensus       227 ~---------~~v~~v~~~~~~~-------------~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~----l~~  280 (515)
T 2jis_A          227 T---------DSVRVVKADERGK-------------MVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP----LEA  280 (515)
T ss_dssp             G---------GGEEEECBCTTSC-------------BCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHH
T ss_pred             C---------CcEEEEecCCCCc-------------CCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC----HHH
Confidence            0         0122222221111             1157788877642  1235788888888888898877    999


Q ss_pred             HHHHHHhcCCEEEEechhcCcccccccceecccCC-CCchhch--hhhhcCCcccceeEEeCHH--HHHHhhh-ccCCC-
Q 010250          297 VQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSF--AKALSSAYMPIGAILVSPE--VSEVIHS-QSNTL-  369 (514)
Q Consensus       297 l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv-~pDiv~~--sK~l~gG~~pig~v~~~~~--i~~~l~~-~~~~~-  369 (514)
                      |.++|++||+++|+|++|+++......+.....++ .+|++++  .|.++++ +++|+++++++  +++.... ..... 
T Consensus       281 I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p-~g~G~l~~~~~~~~~~~~~~~~~~yl~  359 (515)
T 2jis_A          281 IADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAG-LQCSALLLQDTSNLLKRCHGSQASYLF  359 (515)
T ss_dssp             HHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESCCSCHHHHHHCC------
T ss_pred             HHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCC-CCeeEEEEeChHHHHHHHhcCCchhcc
Confidence            99999999999999999997755443333334455 6898876  7998876 58999999876  6554211 00000 


Q ss_pred             C--c----ccccCCC------CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEE
Q 010250          370 G--S----FSHGFTY------SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTE  437 (514)
Q Consensus       370 ~--~----~~~~~t~------~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~  437 (514)
                      +  .    ....+++      ....+.+.++++++....-+++.++..++++++.+.|+++.+..++..  .....+.+.
T Consensus       360 ~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~--~~~~~v~f~  437 (515)
T 2jis_A          360 QQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVME--PEFVNVCFW  437 (515)
T ss_dssp             ---CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSC--CSSSEEEEE
T ss_pred             CCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC--CCeeEEEEE
Confidence            0  0    0000111      112344444555543222235677888889999999987632222221  112334443


Q ss_pred             EccCCCCCCCCCCcc-----chHHHHHHHHHHCCcEEEe----eC--CEEEEeC-CCCCCHHHHHHHHHHHHHHHH
Q 010250          438 FADNKSPNEPFPPEW-----GIGAYFGAQCEKHGMLVRV----SG--DNIMMSP-PFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       438 ~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~Gv~~~~----~g--~~iRi~p-~~~~t~e~id~~~~~l~~~l~  501 (514)
                      +.+.......-..+.     .....+.+.+.+.|++...    .+  +.||+++ +..+|++||++++++|+++++
T Consensus       438 ~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~  513 (515)
T 2jis_A          438 FVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQ  513 (515)
T ss_dssp             ECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred             EeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence            322100000000010     0122366788889976532    12  4699999 788999999999999988764

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.80  E-value=1.2e-18  Score=178.81  Aligned_cols=281  Identities=16%  Similarity=0.163  Sum_probs=175.3

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccccee---eeecCCCcc
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI---AASLSGLPA  219 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~---~~~~s~~~~  219 (514)
                      .+...+++++|+++++   .+++++++||+||++.+++ ..        ..+++||+.++.||+....   .+...|.  
T Consensus        54 ~~~~~~lr~~la~~~g---~~~~i~~~sGt~a~~~al~-~~--------~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~--  119 (393)
T 1n8p_A           54 NPNRENLERAVAALEN---AQYGLAFSSGSATTATILQ-SL--------PQGSHAVSIGDVYGGTHRYFTKVANAHGV--  119 (393)
T ss_dssp             CHHHHHHHHHHHHHTT---CSEEEEESCHHHHHHHHHH-TS--------CSSCEEEEESSCCHHHHHHHHHTSTTTCS--
T ss_pred             ChhHHHHHHHHHHHhC---CCcEEEECChHHHHHHHHH-Hc--------CCCCEEEEeCCCchHHHHHHHHHHHHcCc--
Confidence            4556788999999873   3478888999999999998 42        2346899999999874321   1111111  


Q ss_pred             ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 010250          220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA  299 (514)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~  299 (514)
                                .+..++.                  .+ +++++++.    +++++|+++++++++|.+.+    +++|.+
T Consensus       120 ----------~v~~v~~------------------~d-~~l~~~i~----~~t~lv~~~~~~nptG~~~~----l~~i~~  162 (393)
T 1n8p_A          120 ----------ETSFTND------------------LL-NDLPQLIK----ENTKLVWIETPTNPTLKVTD----IQKVAD  162 (393)
T ss_dssp             ----------CCEEESS------------------HH-HHHHHHSC----SSEEEEEECSSCTTTCCCCC----HHHHHH
T ss_pred             ----------EEEEeCC------------------Ch-HHHHHhcc----cCceEEEEECCCCCcceecC----HHHHHH
Confidence                      0111110                  03 55666553    46889999999999999887    999999


Q ss_pred             HHHhc----CCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccc-eeEEeC-HHHHHHhhhccCCCCc
Q 010250          300 VVKKY----DILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPI-GAILVS-PEVSEVIHSQSNTLGS  371 (514)
Q Consensus       300 l~~~~----gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pi-g~v~~~-~~i~~~l~~~~~~~~~  371 (514)
                      +|++|    |+++|+||+|+++.+ ....     ...+|++  +++|.++++++++ |+++++ +++++.+....     
T Consensus       163 la~~~~~~~~~~livD~a~~~~~~-~~~~-----~~~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~-----  231 (393)
T 1n8p_A          163 LIKKHAAGQDVILVVDNTFLSPYI-SNPL-----NFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQ-----  231 (393)
T ss_dssp             HHHHHTTTTTCEEEEECTTTHHHH-CCGG-----GGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHH-----
T ss_pred             HHHHhCCCCCCEEEEeCCcccccc-CCHH-----HcCCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHH-----
Confidence            99999    999999999986543 2221     1236777  6889999755788 888885 78888776421     


Q ss_pred             ccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC------CCcee----------EEEe-e-eee
Q 010250          372 FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD------SPIIG----------EIRG-T-GLI  433 (514)
Q Consensus       372 ~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~------~~~~~----------~v~g-~-g~~  433 (514)
                      ..++.  ..++..++++..+++.+..  ..++..++.+.+.+.|++...      +|.+.          ..++ . |.+
T Consensus       232 ~~~g~--~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i  307 (393)
T 1n8p_A          232 NAIGA--IPSPFDAWLTHRGLKTLHL--RVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGM  307 (393)
T ss_dssp             HHHCC--CCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSE
T ss_pred             HhcCC--CCCHHHHHHHHhccchHHH--HHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccE
Confidence            11222  3357777777777765432  233344444555555543210      11110          0123 5 778


Q ss_pred             EEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE----------e------------------eCCEEEEeCCCCCC
Q 010250          434 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----------V------------------SGDNIMMSPPFIMS  485 (514)
Q Consensus       434 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----------~------------------~g~~iRi~p~~~~t  485 (514)
                      ++|.+....          .....+...+...++.+.          |                  ..+.||++.....+
T Consensus       308 ~~~~l~~~~----------~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~  377 (393)
T 1n8p_A          308 ISFRIKGGA----------EAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDT  377 (393)
T ss_dssp             EEEEESSCH----------HHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCH
T ss_pred             EEEEeCCcH----------HHHHHHHhhCCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCH
Confidence            899886320          013334444332222111          0                  02469999999999


Q ss_pred             HHHHHHHHHHHHHH
Q 010250          486 PEEVDELISKYGKA  499 (514)
Q Consensus       486 ~e~id~~~~~l~~~  499 (514)
                      +++|+.+.++|+++
T Consensus       378 ~~~i~~l~~al~~~  391 (393)
T 1n8p_A          378 DDLLEDIKQALKQA  391 (393)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999888888754

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=99.79  E-value=2.7e-18  Score=176.38  Aligned_cols=336  Identities=13%  Similarity=0.058  Sum_probs=193.8

Q ss_pred             EEEccCCcccccCCCC--CHHHHHHHHHHHhc-CCccccccccCCchHHHHHHHHHHhcCc-----CCCCeEEE--eCCh
Q 010250          102 YLDSLAGLWCTALGGS--EPRLVAAATAQLNT-LPFYHSFWNRTTKPSLDLAKELLEMFTA-----SKMAKVFF--TNSG  171 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~--~p~v~~A~~~~l~~-~~~~~~~~~~~~~~~~ela~~L~~~~~~-----~~~~~v~~--~~sG  171 (514)
                      .|||..|......++.  .|.+.+++.+.+.. ....+.    ......++.+.+++++..     ...+++++  ++||
T Consensus        30 ~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~----~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~  105 (401)
T 7aat_A           30 KMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYL----PIAGLADFTRASAELALGENSEAFKSGRYVTVQGISG  105 (401)
T ss_dssp             CEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCC----CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHH
T ss_pred             ceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCC----CCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcc
Confidence            6888877432333432  34678877776653 111111    111234555666655521     12578877  9999


Q ss_pred             hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCCCCh
Q 010250          172 SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETE  249 (514)
Q Consensus       172 seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  249 (514)
                      ++|+..+++.+..+.     ..+++|++.+++|++........ |....            .++..  ..+.        
T Consensus       106 ~~al~~~~~~l~~~~-----~~gd~Vlv~~p~~~~~~~~~~~~-g~~~~------------~~~~~~~~~~~--------  159 (401)
T 7aat_A          106 TGSLRVGANFLQRFF-----KFSRDVYLPKPSWGNHTPIFRDA-GLQLQ------------AYRYYDPKTCS--------  159 (401)
T ss_dssp             HHHHHHHHHHHHHHC-----TTCCEEEEEESCCTTHHHHHHHT-TCEEE------------EEECEETTTTE--------
T ss_pred             hHHHHHHHHHHHHhc-----cCCCEEEEcCCCchhHHHHHHHc-CCeeE------------eeeeeccccCc--------
Confidence            999999998765331     22468999999998864332222 21110            11110  0011        


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc---ccee
Q 010250          250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT---MFGC  326 (514)
Q Consensus       250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~---~~~~  326 (514)
                           .+++++++.+.+. .+++.++++...++++|.+ .+.+.+++|.++|++||+++|+||+|.+|+..+.   .+..
T Consensus       160 -----~d~~~l~~~l~~~-~~~~~~v~i~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~  232 (401)
T 7aat_A          160 -----LDFTGAMEDISKI-PEKSIILLHACAHNPTGVD-PRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWAL  232 (401)
T ss_dssp             -----ECHHHHHHHHTTS-CTTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHH
T ss_pred             -----cCHHHHHHHHHhC-CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHH
Confidence                 0145566666543 3456777777778888865 4678899999999999999999999998866542   1222


Q ss_pred             ccc-CCCCch---hchhhhhcCCcccceeEEe---CHHHH----HHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH-
Q 010250          327 DKY-SIKPDL---VSFAKALSSAYMPIGAILV---SPEVS----EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI-  394 (514)
Q Consensus       327 ~~~-gv~pDi---v~~sK~l~gG~~pig~v~~---~~~i~----~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~-  394 (514)
                      ..+ +..+++   .++||.++..++++|++++   +++..    ..+..       .....+.+.+..++.++..+++. 
T Consensus       233 ~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~  305 (401)
T 7aat_A          233 RHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKI-------LIRPMYSNPPMNGARIASLILNTP  305 (401)
T ss_dssp             HHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHH-------HHHHHHSSCCHHHHHHHHHHHHCH
T ss_pred             HHHHhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHH-------HHHhccCCCChHHHHHHHHHhCCH
Confidence            211 233444   3789998743389999876   66633    33331       11112333344555555444421 


Q ss_pred             ------Hh-hccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeee-EEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250          395 ------YK-ERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLI-LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG  466 (514)
Q Consensus       395 ------~~-~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G  466 (514)
                            .+ -++..++++++++++.+.|+++...+.+......+.+ ..+.+.               .+.+...+.++|
T Consensus       306 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ll~~~g  370 (401)
T 7aat_A          306 ELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLK---------------PEQVERLTKEFS  370 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCC---------------HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCCC---------------HHHHHHHHHhCC
Confidence                  11 1345678888888898888876211111111222333 232221               233434456789


Q ss_pred             cEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          467 MLVRVSGDNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       467 v~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      |.+.+.   +|++... .|+++|++++++|++++
T Consensus       371 i~v~~~---~Ris~~~-~~~~~i~~~~~~l~~~~  400 (401)
T 7aat_A          371 IYMTKD---GRISVAG-VASSNVGYLAHAIHQVT  400 (401)
T ss_dssp             EECCTT---CEEEGGG-CCTTTHHHHHHHHHHHH
T ss_pred             EeccCC---CeEEecc-CChhhHHHHHHHHHHHh
Confidence            998743   6888643 56667999999998875

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.79  E-value=6.5e-18  Score=175.67  Aligned_cols=284  Identities=16%  Similarity=0.130  Sum_probs=180.4

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccccee---eeecCCCc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI---AASLSGLP  218 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~---~~~~s~~~  218 (514)
                      ..+...+++++|+++++   .++.++++||++|+..+++...        ..+++||+.++.|++....   .+...|..
T Consensus       112 ~~~~~~~l~~~lA~l~g---~~~~v~~~sG~~Ai~~al~~l~--------~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~  180 (445)
T 1qgn_A          112 GNPTTVVLEEKISALEG---AESTLLMASGMCASTVMLLALV--------PAGGHIVTTTDCYRKTRIFIETILPKMGIT  180 (445)
T ss_dssp             CCHHHHHHHHHHHHHHT---CSEEEEESCHHHHHHHHHHHHS--------CSSCEEEEETTSCHHHHHHHHHTGGGGTCE
T ss_pred             CChHHHHHHHHHHHHhC---CCcEEEeCCHHHHHHHHHHHHh--------CCCCEEEEcCCCchhHHHHHHHHHHHcCCE
Confidence            45667889999999874   3477888999999999998653        2346899999888774321   11111111


Q ss_pred             cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ  298 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~  298 (514)
                                  +..++..                  +++++++.+..   +++++|++|++++++|.+.+    +++|.
T Consensus       181 ------------v~~v~~~------------------d~~~l~~ai~~---~tv~lV~le~p~NptG~v~d----l~~I~  223 (445)
T 1qgn_A          181 ------------ATVIDPA------------------DVGALELALNQ---KKVNLFFTESPTNPFLRCVD----IELVS  223 (445)
T ss_dssp             ------------EEEECSS------------------CHHHHHHHHHH---SCEEEEEEESSCTTTCCCCC----HHHHH
T ss_pred             ------------EEEeCCC------------------CHHHHHHHhcc---CCCCEEEEeCCCCCCCcccC----HHHHH
Confidence                        1111110                  15778888763   34489999999999999887    99999


Q ss_pred             HHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCc-ccceeEEeCHHHHHHhhhccCCCCccccc
Q 010250          299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAY-MPIGAILVSPEVSEVIHSQSNTLGSFSHG  375 (514)
Q Consensus       299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~-~pig~v~~~~~i~~~l~~~~~~~~~~~~~  375 (514)
                      ++|++||+++|+||+|+.. ..     .......+|+++  ++|.++|++ .++|++++++++++.+...       ...
T Consensus       224 ~la~~~g~~livD~a~~~~-~~-----~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~-------~~~  290 (445)
T 1qgn_A          224 KLCHEKGALVCIDGTFATP-LN-----QKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNL-------HHI  290 (445)
T ss_dssp             HHHHHTTCEEEEECTTTCT-TT-----CCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHH-------HHH
T ss_pred             HHHHHcCCEEEEECCCccc-cc-----CCccccCCEEEEECCcccccccccceEEEEEECHHHHHHHHHH-------HHH
Confidence            9999999999999999732 11     122345678885  789998742 3689999999998887632       111


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCce----------eEEEeeeeeEEEEEcc
Q 010250          376 FTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPII----------GEIRGTGLILGTEFAD  440 (514)
Q Consensus       376 ~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~----------~~v~g~g~~~~i~~~~  440 (514)
                      .....+|+.+..++..++.+..  ..++..++.+++.+.|++...     +|..          ...++.|.++.|.+..
T Consensus       291 ~g~~~~~~~a~~~~~~l~~l~~--r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~  368 (445)
T 1qgn_A          291 LGGALNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDG  368 (445)
T ss_dssp             HCCCCCHHHHHHHHHHGGGHHH--HHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESS
T ss_pred             hCCCCCHHHHHHHHHhHHHHHH--HHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECC
Confidence            1223467777766666665432  234445556666666665411     1110          1123578899999864


Q ss_pred             CCCCCCCCCCccchHHHHHHHHHHCCcEEEe----------------------------eCCEEEEeCCCCCCHHHHHHH
Q 010250          441 NKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV----------------------------SGDNIMMSPPFIMSPEEVDEL  492 (514)
Q Consensus       441 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~----------------------------~g~~iRi~p~~~~t~e~id~~  492 (514)
                      ..          .....+...|...++.++.                            ..+.|||+..    .||++.+
T Consensus       369 ~~----------~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG----~Edid~l  434 (445)
T 1qgn_A          369 DL----------LTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG----VEDFDDL  434 (445)
T ss_dssp             CH----------HHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC----SSCHHHH
T ss_pred             CH----------HHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEec----cCCHHHH
Confidence            21          0123343433312221110                            1257999943    5789999


Q ss_pred             HHHHHHHHHH
Q 010250          493 ISKYGKALKA  502 (514)
Q Consensus       493 ~~~l~~~l~~  502 (514)
                      ++.|++++++
T Consensus       435 i~~L~~al~~  444 (445)
T 1qgn_A          435 KADILQALDS  444 (445)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHhh
Confidence            9999998864

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.79  E-value=7.8e-19  Score=183.89  Aligned_cols=282  Identities=18%  Similarity=0.222  Sum_probs=179.3

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccccee---eeecCCCcc
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI---AASLSGLPA  219 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~---~~~~s~~~~  219 (514)
                      .+...+++++++++++   .++++++++|++|+..+++++         ..+++||+.++.||+....   .....|.. 
T Consensus       132 ~~~~~~l~~~la~~~g---~~~~i~~~sGt~al~~~l~~~---------~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~-  198 (464)
T 1ibj_A          132 NPTRDALESLLAKLDK---ADRAFCFTSGMAALSAVTHLI---------KNGEEIVAGDDVYGGSDRLLSQVVPRSGVV-  198 (464)
T ss_dssp             CHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHTTS---------CTTCEEEEESSCCHHHHHHHHHTSGGGTCE-
T ss_pred             CHHHHHHHHHHHHHhC---CCeEEEECCHHHHHHHHHHHh---------CCCCEEEEECCCchhHHHHHHHHHHHcCCE-
Confidence            4467889999999873   458899999999998887532         3356899999999886321   01111111 


Q ss_pred             ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 010250          220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA  299 (514)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~  299 (514)
                                 +..++..                  +.++|++.+.    +++++|+++++++.+|.+.+    +++|.+
T Consensus       199 -----------v~~v~~~------------------d~~~l~~~i~----~~tk~v~l~~p~NptG~v~~----l~~i~~  241 (464)
T 1ibj_A          199 -----------VKRVNTT------------------KLDEVAAAIG----PQTKLVWLESPTNPRQQISD----IRKISE  241 (464)
T ss_dssp             -----------EEEECTT------------------SHHHHHHHCC----SSEEEEEECSSCTTTCCCCC----HHHHHH
T ss_pred             -----------EEEeCCC------------------CHHHHHHHhc----cCceEEEEeCCCCCCCEeec----HHHHHH
Confidence                       1111110                  1467776664    46899999999999998886    999999


Q ss_pred             HHHhcCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCC-cccceeEEeC-HHHHHHhhhccCCCCccccc
Q 010250          300 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSA-YMPIGAILVS-PEVSEVIHSQSNTLGSFSHG  375 (514)
Q Consensus       300 l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG-~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~  375 (514)
                      +|++||+++|+||+|+. |....  ..+   ..+|++  +++|.++|+ ++++|+++++ +++++.+...       ...
T Consensus       242 la~~~gi~livDea~~~-g~~~~--~~~---~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~-------~~~  308 (464)
T 1ibj_A          242 MAHAQGALVLVDNSIMS-PVLSR--PLE---LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFL-------QNS  308 (464)
T ss_dssp             HHHTTTCEEEEECTTTC-TTTCC--GGG---TTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHH-------HHH
T ss_pred             HHHHcCCEEEEECCCcc-cccCC--hhh---cCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHH-------HHh
Confidence            99999999999999973 22111  112   346777  588999872 2688999998 4787777531       111


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhhh-------hhccCCCcee----EEEeeeeeEEEEEccCC
Q 010250          376 FTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGV-------KAFSDSPIIG----EIRGTGLILGTEFADNK  442 (514)
Q Consensus       376 ~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L-------~~l~~~~~~~----~v~g~g~~~~i~~~~~~  442 (514)
                      ..++.+++++.++.++++.+..  +...+++....+++++.-       ..+..+|.+.    ..++.|.++.+++.+. 
T Consensus       309 ~g~~~~~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~~-  387 (464)
T 1ibj_A          309 EGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSV-  387 (464)
T ss_dssp             TTCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCH-
T ss_pred             cCCCCCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECCH-
Confidence            2334578888888887764321  222344444455554321       1122222111    1234677888887310 


Q ss_pred             CCCCCCCCccchHHHHHHHHHHCCcEEEee----------------------------CCEEEEeCCCCCCHHHHHHHHH
Q 010250          443 SPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------------------------GDNIMMSPPFIMSPEEVDELIS  494 (514)
Q Consensus       443 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------------------g~~iRi~p~~~~t~e~id~~~~  494 (514)
                                .....+.+.|...|+.++.+                            .+.|||++++    ||++++++
T Consensus       388 ----------~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~----edi~~li~  453 (464)
T 1ibj_A          388 ----------ALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI----EDVDDLIS  453 (464)
T ss_dssp             ----------HHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCS----SCHHHHHH
T ss_pred             ----------HHHHHHHHhcCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC----CCHHHHHH
Confidence                      01334666665566655432                            2469999775    89999999


Q ss_pred             HHHHHHHH
Q 010250          495 KYGKALKA  502 (514)
Q Consensus       495 ~l~~~l~~  502 (514)
                      .|++++++
T Consensus       454 ~L~~al~~  461 (464)
T 1ibj_A          454 DLDIAFKT  461 (464)
T ss_dssp             HHHHHHHS
T ss_pred             HHHHHHhh
Confidence            99998864

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=99.79  E-value=1.6e-17  Score=176.22  Aligned_cols=328  Identities=13%  Similarity=0.082  Sum_probs=188.2

Q ss_pred             HHHHHHHHHHhcCcCC-CCeEEEeCChhHHHHHHHHHHHHHHh----hcCCC-CccEEEEEecCCcccceeeeecCCCcc
Q 010250          146 SLDLAKELLEMFTASK-MAKVFFTNSGSEANDTQVKLVWYYNN----ALGRP-NKKKFIARQKSYHGSTLIAASLSGLPA  219 (514)
Q Consensus       146 ~~ela~~L~~~~~~~~-~~~v~~~~sGseA~~~Alk~a~~~~~----~~~~~-~~~~ii~~~~~yHG~t~~~~~~s~~~~  219 (514)
                      ..++.++++++++... .+.++|++|||||+..|++.++.+..    ..|.. .++.+|+.....|.+...+....+...
T Consensus       134 e~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g~  213 (504)
T 2okj_A          134 EQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGT  213 (504)
T ss_dssp             HHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCG
T ss_pred             HHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcCCCc
Confidence            3445577788774321 46899999999999999999875321    11100 012234444445554433332222100


Q ss_pred             ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHH
Q 010250          220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKV  297 (514)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l  297 (514)
                               ..+..++....++.             ++++|++.+.+.  ...++++|++...++..|.+.|    +++|
T Consensus       214 ---------~~v~~v~~~~~~~~-------------d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~----l~~I  267 (504)
T 2okj_A          214 ---------DNVILIKCNERGKI-------------IPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP----IQEI  267 (504)
T ss_dssp             ---------GGEEEECBCTTSCB-------------CHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC----HHHH
T ss_pred             ---------ccEEEEecCCCCCC-------------CHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC----HHHH
Confidence                     01122222211111             157788877642  1225788888888788888876    9999


Q ss_pred             HHHHHhcCCEEEEechhcCcccccccceecccCC-CCchhchh--hhhcCCcccceeEEeCH-HHHHHhhhccCCCCccc
Q 010250          298 QAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSFA--KALSSAYMPIGAILVSP-EVSEVIHSQSNTLGSFS  373 (514)
Q Consensus       298 ~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv-~pDiv~~s--K~l~gG~~pig~v~~~~-~i~~~l~~~~~~~~~~~  373 (514)
                      .++|++||+++++|++|.|+......+.....++ .+|+++++  |.++++ +++|++++++ +++........   .+.
T Consensus       268 ~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p-~~~g~l~~~~~~~~~~~~~~~~---~~l  343 (504)
T 2okj_A          268 ADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVL-LQCSAILVKEKGILQGCNQMCA---GYL  343 (504)
T ss_dssp             HHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCC-SCCEEEEESSTTHHHHHHCCCC---SSS
T ss_pred             HHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCC-cceEEEEEECHHHHHHHhcCCC---ccc
Confidence            9999999999999999997644322222233344 57888765  988877 6899999976 46554221100   111


Q ss_pred             c-cCC----------------CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEE
Q 010250          374 H-GFT----------------YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGT  436 (514)
Q Consensus       374 ~-~~t----------------~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i  436 (514)
                      . +.+                ...+.+.+.++++++..-.-+++.++..++++++.+.|+++.+..++........++.+
T Consensus       344 ~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f  423 (504)
T 2okj_A          344 FQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCF  423 (504)
T ss_dssp             CCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEE
T ss_pred             cCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEE
Confidence            0 000                11235666666555542222346777888889999988775222222110123344455


Q ss_pred             EEccCCCCCCCCCCc-----cchHHHHHHHHHHCCcE-EE--ee-C--CEEEEeCC-CCCCHHHHHHHHHHHHHHHHHH
Q 010250          437 EFADNKSPNEPFPPE-----WGIGAYFGAQCEKHGML-VR--VS-G--DNIMMSPP-FIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       437 ~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~Gv~-~~--~~-g--~~iRi~p~-~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      .+.+..........+     ......+.+.|.++|++ +.  +. +  +.+|+++. ..+|++||++++++|+++++++
T Consensus       424 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~~  502 (504)
T 2okj_A          424 WYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQDL  502 (504)
T ss_dssp             EECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC-
T ss_pred             EEeCccccccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            443211000000000     01245677889999964 33  22 3  36999985 7789999999999999887543

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.78  E-value=7.2e-18  Score=173.66  Aligned_cols=282  Identities=15%  Similarity=0.135  Sum_probs=178.4

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCcc
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLPA  219 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~~  219 (514)
                      ++...++++.|+++++.   +..++++||++|+..+++ ..        ..+++||+.++.|++.....   ....|.. 
T Consensus        66 ~p~~~~l~~~la~~~g~---~~~i~~~sG~~ai~~~~~-l~--------~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~-  132 (403)
T 3cog_A           66 NPTRNCLEKAVAALDGA---KYCLAFASGLAATVTITH-LL--------KAGDQIICMDDVYGGTNRYFRQVASEFGLK-  132 (403)
T ss_dssp             CHHHHHHHHHHHHHHTC---SEEEEESCHHHHHHHHHT-TS--------CTTCEEEEESSCCHHHHHHHHHTGGGGTCE-
T ss_pred             CchHHHHHHHHHHHhCC---CcEEEECCHHHHHHHHHH-Hh--------CCCCEEEEeCCCcchHHHHHHHHHHHcCCE-
Confidence            45567899999998742   367778889999999987 42        33568999999998843211   1111111 


Q ss_pred             ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 010250          220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA  299 (514)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~  299 (514)
                                 +..++..                  +.+++++.+.    +++++|++|++++++|.+.+    +++|.+
T Consensus       133 -----------v~~v~~~------------------d~~~l~~~i~----~~t~~v~~~~p~nptG~~~~----l~~i~~  175 (403)
T 3cog_A          133 -----------ISFVDCS------------------KIKLLEAAIT----PETKLVWIETPTNPTQKVID----IEGCAH  175 (403)
T ss_dssp             -----------EEEECTT------------------SHHHHHHHCC----TTEEEEEEESSCTTTCCCCC----HHHHHH
T ss_pred             -----------EEEECCC------------------CHHHHHHhcC----cCCeEEEEECCCCCCCeeeC----HHHHHH
Confidence                       1111110                  1466666654    46889999999999999887    999999


Q ss_pred             HHHhcC-CEEEEechhcCcccccccceecccCCCCchh--chhhhhcC-CcccceeEEeC-HHHHHHhhhccCCCCcccc
Q 010250          300 VVKKYD-ILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSS-AYMPIGAILVS-PEVSEVIHSQSNTLGSFSH  374 (514)
Q Consensus       300 l~~~~g-illI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~g-G~~pig~v~~~-~~i~~~l~~~~~~~~~~~~  374 (514)
                      +|++|| +++|+||+|+++. .+..     .+..+|++  +++|.++| |..++|+++++ +++++.+...       ..
T Consensus       176 la~~~g~~~livD~~~~~~~-~~~~-----~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~-------~~  242 (403)
T 3cog_A          176 IVHKHGDIILVVDNTFMSPY-FQRP-----LALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFL-------QN  242 (403)
T ss_dssp             HHTSSSCCEEEEECTTTCTT-TCCT-----TTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHH-------HH
T ss_pred             HHHHcCCCEEEEECCCcccc-cCCc-----cccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHH-------HH
Confidence            999999 9999999998542 2221     22457877  68899987 32468999984 7888877631       23


Q ss_pred             cCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhh--h-----hhccCCCcee----EEEeeeeeEEEEEccC
Q 010250          375 GFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDG--V-----KAFSDSPIIG----EIRGTGLILGTEFADN  441 (514)
Q Consensus       375 ~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~--L-----~~l~~~~~~~----~v~g~g~~~~i~~~~~  441 (514)
                      ..+...+|+.+.++..+++.+..  +...++.....+++.+.  +     ..+..+|...    ..++.|.++.+.+...
T Consensus       243 ~~g~~~~~~~~~~~~~~l~~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~  322 (403)
T 3cog_A          243 SLGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGT  322 (403)
T ss_dssp             HHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSC
T ss_pred             hcCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCC
Confidence            33455688888888877765432  22233344444444332  0     0111222111    1235688888887531


Q ss_pred             CCCCCCCCCccchHHHHHHHHHHCCcEEEe---e----------------------------CCEEEEeCCCCCCHHHHH
Q 010250          442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRV---S----------------------------GDNIMMSPPFIMSPEEVD  490 (514)
Q Consensus       442 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~---~----------------------------g~~iRi~p~~~~t~e~id  490 (514)
                                   .......+.+.|+++..   +                            .+.||+++.+..++++|+
T Consensus       323 -------------~~~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~  389 (403)
T 3cog_A          323 -------------LQHAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLE  389 (403)
T ss_dssp             -------------HHHHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHH
T ss_pred             -------------HHHHHHHHHhCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHH
Confidence                         12244556677775431   0                            256999988877777777


Q ss_pred             HHHHHHHHHH
Q 010250          491 ELISKYGKAL  500 (514)
Q Consensus       491 ~~~~~l~~~l  500 (514)
                      .+.++|++++
T Consensus       390 ~l~~al~~~~  399 (403)
T 3cog_A          390 DLDQALKAAH  399 (403)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHhh
Confidence            7776666543

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=99.77  E-value=1.8e-16  Score=165.73  Aligned_cols=344  Identities=11%  Similarity=0.037  Sum_probs=194.3

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCC-----eEEEeCChhHHHHHHHHHHHHHHhh---
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMA-----KVFFTNSGSEANDTQVKLVWYYNNA---  188 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~-----~v~~~~sGseA~~~Alk~a~~~~~~---  188 (514)
                      .+|.+.+++.+.++........+........++.++++++++. +.+     .+++++||+||+..++..++.....   
T Consensus        54 ~~~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~-~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~  132 (452)
T 2dgk_A           54 DDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHA-PAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRME  132 (452)
T ss_dssp             CCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTC-CCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCC-CcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHH
Confidence            4689999998888653222111112234455677777888743 222     4899999999999999887642211   


Q ss_pred             -cCCC-CccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCC-cccCCCCCCChhHHHHHHHHHHHHHHH
Q 010250          189 -LGRP-NKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLANNLEDLIL  265 (514)
Q Consensus       189 -~~~~-~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~li~  265 (514)
                       .|.+ .+.+||+.+  .|.....+....|...            ..++... .|+.             ++++|++.+.
T Consensus       133 ~~G~~~~~~~vi~~~--~h~~~~~~~~~~G~~v------------~~v~~~~~~~~~-------------d~~~l~~~i~  185 (452)
T 2dgk_A          133 AAGKPTDKPNLVCGP--VQICWHKFARYWDVEL------------REIPMRPGQLFM-------------DPKRMIEACD  185 (452)
T ss_dssp             HTTCCCSCCEEEESS--CCHHHHHHHHHTTCEE------------EECCCBTTBCSC-------------CHHHHHHHCC
T ss_pred             hcCCCCCCcEEEECC--CcHHHHHHHHHcCceE------------EEEecCCCCCeE-------------CHHHHHHHHh
Confidence             1211 134666655  6665433333333211            1111111 1111             1467777664


Q ss_pred             HhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc------CCEEEEechhcCccc--ccccceecccCC-CCchh
Q 010250          266 KEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY------DILFIADEVICAFGR--LGTMFGCDKYSI-KPDLV  336 (514)
Q Consensus       266 ~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~------gillI~DEv~tG~gr--~G~~~~~~~~gv-~pDiv  336 (514)
                          +++.+|++...++..|.+.|    +++|.++|++|      |+++++|++|.++..  ........ +.+ ..|.+
T Consensus       186 ----~~t~~v~~~~~~n~tG~~~~----l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~d~~  256 (452)
T 2dgk_A          186 ----ENTIGVVPTFGVTYTGNYEF----PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWD-FRLPRVKSI  256 (452)
T ss_dssp             ----TTEEEEECBBSCTTTCBBCC----HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCS-TTSTTEEEE
T ss_pred             ----hCCEEEEEEcCCcCCcccCC----HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhh-cCCCCCcEE
Confidence                34666776666667888876    99999999996      999999999987532  11111111 111 24666


Q ss_pred             ch--hhhhcCCcccceeEEeCHH-HH-HHhhhccCCCCccc----ccCCCCC-cHHHHHHHHHHHHHHhhccHHHHHHHH
Q 010250          337 SF--AKALSSAYMPIGAILVSPE-VS-EVIHSQSNTLGSFS----HGFTYSG-HPVSCAVAIEALKIYKERNIVEQVNKI  407 (514)
Q Consensus       337 ~~--sK~l~gG~~pig~v~~~~~-i~-~~l~~~~~~~~~~~----~~~t~~~-~pl~~aaa~aal~~~~~~~~~~~~~~~  407 (514)
                      ++  .|.+.+| +++|+++++++ ++ +.+.......+...    ..++..+ ..+++.+++..+..-.-++..++..++
T Consensus       257 ~~~~hK~~~~~-~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~  335 (452)
T 2dgk_A          257 SASGHKFGLAP-LGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQV  335 (452)
T ss_dssp             EEETTTTTCCC-SSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EECcccccCCC-CCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            55  4855555 78999999653 33 44321111111000    0011111 233333343333211113456777888


Q ss_pred             HHHHHhhhhhccCCCceeEEE--eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe----e----CCEEE
Q 010250          408 APKFQDGVKAFSDSPIIGEIR--GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV----S----GDNIM  477 (514)
Q Consensus       408 ~~~l~~~L~~l~~~~~~~~v~--g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~----~----g~~iR  477 (514)
                      ++++.+.|+++....++....  ....++.+.+.+....      .. ....+.+.|.++|+.+..    .    ...+|
T Consensus       336 a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~~------~~-~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lR  408 (452)
T 2dgk_A          336 AAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDP------GY-TLYDLSERLRLRGWQVPAFTLGGEATDIVVMR  408 (452)
T ss_dssp             HHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCCC------SC-CHHHHHHHHHHTTCBCCEEECSTTCTTCEEEE
T ss_pred             HHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcccc------cC-CHHHHHHHHHhcCCeeeeeeCCcccCCeEEEE
Confidence            888888888762221111100  2345666666532100      00 135688899999996542    1    13699


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      ++.....|++|++++++.|+++++.+.+
T Consensus       409 is~~~~~t~e~id~li~~l~~~~~~~~~  436 (452)
T 2dgk_A          409 IMCRRGFEMDFAELLLEDYKASLKYLSD  436 (452)
T ss_dssp             EECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            9988888999999999999999876654

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.76  E-value=1.3e-18  Score=181.56  Aligned_cols=290  Identities=13%  Similarity=0.049  Sum_probs=175.9

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH  221 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~  221 (514)
                      +.....++.+.+++ ++. + +.+++++||++|+..+++.+.        .++++|++.+++|++........+..+.+.
T Consensus        55 ~~~~~~~~~~~la~-~g~-~-~~v~~~~G~t~a~~~~~~a~~--------~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v  123 (446)
T 2x3l_A           55 PEEVILKSMKQVEK-HSD-Y-DGYFLVNGTTSGILSVIQSFS--------QKKGDILMARNVHKSVLHALDISQQEGHFI  123 (446)
T ss_dssp             CSSHHHHHHHHHCS-CTT-E-EEEEESSHHHHHHHHHHHTTT--------TSSSCEEECTTCCHHHHHHHHHHTCCEEEC
T ss_pred             cchHHHHHHHHHHh-cCC-C-ceEEEeCCHHHHHHHHHHHhc--------CCCCEEEEecCccHHHHHHHHHcCCeEEEE
Confidence            34455677888888 742 2 578899999999999998763        345678888888776543332222221110


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                      .           ......|.  ...       ..+.++|   +   . .++++|++.+ ++..|.+.+    +++|.++|
T Consensus       124 ~-----------~~~~~~~~--~~~-------~~d~~~l---~---~-~~~~~v~~~~-~n~~G~~~~----l~~I~~l~  171 (446)
T 2x3l_A          124 E-----------THQSPLTN--HYN-------KVNLSRL---N---N-DGHKLVVLTY-PNYYGETFN----VEEVIKSL  171 (446)
T ss_dssp             E-----------EEECTTTS--SEE-------EEEC--------------CCEEEEES-SCTTSCCCC----HHHHHHHH
T ss_pred             e-----------CeeccccC--cCC-------CCCHHHH---c---C-CCceEEEEEC-CCCCeEecC----HHHHHHHH
Confidence            0           00000000  000       0001222   1   1 2455666666 455788876    99999999


Q ss_pred             HhcCCEEEEechhcC-cccccccceecccCCCCchhch--hhhhcCCcccceeEEeCHHHHH--HhhhccCCCCcccccC
Q 010250          302 KKYDILFIADEVICA-FGRLGTMFGCDKYSIKPDLVSF--AKALSSAYMPIGAILVSPEVSE--VIHSQSNTLGSFSHGF  376 (514)
Q Consensus       302 ~~~gillI~DEv~tG-~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG~~pig~v~~~~~i~~--~l~~~~~~~~~~~~~~  376 (514)
                      ++||+++|+||+|++ +...+.  ........+|+++.  +|.++++ .++|++++++++++  .+...      .....
T Consensus       172 ~~~~~~livDea~~~~~~f~~~--~~~~~~~g~Di~~~S~~K~l~~~-~g~g~l~~~~~~i~~~~~~~~------~~~~~  242 (446)
T 2x3l_A          172 HQLNIPVLIDEAHGAHFGLQGF--PDSTLNYQADYVVQSFHKTLPAL-TMGSVLYIHKNAPYRENIIEY------LSYFQ  242 (446)
T ss_dssp             HHTTCCEEEECTTCTTTTSTTS--CCCGGGGTCSEEEECHHHHSSSC-TTCEEEEEETTCTTHHHHHHH------HHHHS
T ss_pred             HhcCCeEEEcchhhhhhccCCC--CCChHHcCCCEEEECCccccccc-cccEEEEEcCCcCCHHHHHHH------HHHHc
Confidence            999999999999986 222222  12222233688764  5988876 57899999887654  33210      01112


Q ss_pred             CCCCcHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccc
Q 010250          377 TYSGHPVSCAVAIEALKIYKERN---IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWG  453 (514)
Q Consensus       377 t~~~~pl~~aaa~aal~~~~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~  453 (514)
                      +.+.+...+++..++++.+++.+   +.++..++.+++++.  .+   .+..  ...+..+.+.+...            
T Consensus       243 ~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~--g~---~~~~--~~~~~~l~i~~~~~------------  303 (446)
T 2x3l_A          243 TSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK--GF---EMLQ--VDDPLKLLIKYEGF------------  303 (446)
T ss_dssp             CSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH--TC---EEEE--CSSTTEEEEECTTS------------
T ss_pred             CCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc--CC---EECc--CCCCeEEEEEeCCc------------
Confidence            44456666666667777776532   677777777777765  22   1111  00122344544310            


Q ss_pred             hHHHHHHHHHHCCcEEE-eeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          454 IGAYFGAQCEKHGMLVR-VSGDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       454 ~~~~~~~~l~~~Gv~~~-~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ....+.+.|.++||.+. ++.+.+|++++..+|++++ +++++|+++++.+
T Consensus       304 ~~~~l~~~L~~~GI~v~~~g~~~iRi~~~~~~t~e~i-~l~~aL~~~~~~~  353 (446)
T 2x3l_A          304 TGHDIQNWFMNAHIYLELADDYQALAILPLWHHDDTY-LFDSLLRKIEDMI  353 (446)
T ss_dssp             CHHHHHHHHHHTTEEESEECSSCEEEECCCCCTTCCC-CHHHHHHHHHTCC
T ss_pred             CHHHHHHHHHHCCCEEEecCCCEEEEEeecCCCHHHH-HHHHHHHHHHHhh
Confidence            14567888999999998 4446799999988999999 9999999887543

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=99.74  E-value=5.1e-17  Score=173.53  Aligned_cols=363  Identities=13%  Similarity=0.105  Sum_probs=198.5

Q ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHh-cCc----CCCCeEEEeCChhHHHH
Q 010250          102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEM-FTA----SKMAKVFFTNSGSEAND  176 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~-~~~----~~~~~v~~~~sGseA~~  176 (514)
                      ++||..|    ..++.+|.+++++.+++.. ..|... .+..+...++++...+. +..    .+.++|++++|+++|+.
T Consensus       106 ~i~l~~g----~~~~~~~~~~~al~~~~~~-~~Y~~~-~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~  179 (546)
T 2zy4_A          106 SLSYVRD----QLGLDPAAFLHEMVDGILG-CNYPVP-PRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMA  179 (546)
T ss_dssp             HHHHHHH----TSCCCHHHHHHHHHHHHHT-CSCCSS-SSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHH
T ss_pred             hhecccC----CCCCCChHHHHHHHHhhhc-CCCCCC-cCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHH
Confidence            4555444    4567888899998888753 222211 12334444555544322 211    13479999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecC-CCccccCCCCCCCCcccccCCC--CcccCCCCCCChhHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLS-GLPALHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYS  253 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  253 (514)
                      .++++....  ... ..++.|++.+++|++....+.... +...            ..+++.  ..|.            
T Consensus       180 ~~~~~l~~~--~l~-~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~------------~~v~~~~~~~~~------------  232 (546)
T 2zy4_A          180 YIFESLKLN--GLL-KAGDKVAIGMPVFTPYIEIPELAQYALEE------------VAINADPSLNWQ------------  232 (546)
T ss_dssp             HHHHHHHHT--TSS-CTTCEEEEEESCCHHHHHHHHSTTSCCEE------------EEEECBGGGTTB------------
T ss_pred             HHHHHhhhh--hcC-CCCCEEEEeCCCCccHHHHHHHcCCCcEE------------EEEecCcccCCC------------
Confidence            999864210  001 234689999999999864432211 1110            111110  0011            


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH--HhcCCEEEEechhcCcccccccceecccCC
Q 010250          254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV--KKYDILFIADEVICAFGRLGTMFGCDKYSI  331 (514)
Q Consensus       254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~--~~~gillI~DEv~tG~gr~G~~~~~~~~gv  331 (514)
                       .++++|++++   . .++.+|++...++++|.+. +.+.+++|.++|  ++||+++|+||+|.+|...+........+.
T Consensus       233 -~d~~~l~~~~---~-~~~k~v~l~~p~NPtG~~~-~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~  306 (546)
T 2zy4_A          233 -YPDSELDKLK---D-PAIKIFFCVNPSNPPSVKM-DQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPEN  306 (546)
T ss_dssp             -CCHHHHGGGG---S-TTEEEEEEESSCSSSCBCC-CHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGG
T ss_pred             -CCHHHHHHhh---C-CCCeEEEEECCCCCCCccC-CHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCC
Confidence             0135565543   2 3456666555677777655 567899999999  889999999999998854221111111111


Q ss_pred             CCchhchhhhhcCCcccceeEEeCHH-HHHHhhhcc------------CC----C-------------CcccccCCCCCc
Q 010250          332 KPDLVSFAKALSSAYMPIGAILVSPE-VSEVIHSQS------------NT----L-------------GSFSHGFTYSGH  381 (514)
Q Consensus       332 ~pDiv~~sK~l~gG~~pig~v~~~~~-i~~~l~~~~------------~~----~-------------~~~~~~~t~~~~  381 (514)
                      ...+.+|||.++..++++|+++++++ +++.+....            ..    +             +......+.+.+
T Consensus       307 ~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s  386 (546)
T 2zy4_A          307 TLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLS  386 (546)
T ss_dssp             EEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSC
T ss_pred             EEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCC
Confidence            11234789988643389999999875 777663110            00    0             000001123344


Q ss_pred             HHHHHH-HHHHH-HHHhh-----ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCC--CCCCCC----
Q 010250          382 PVSCAV-AIEAL-KIYKE-----RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNK--SPNEPF----  448 (514)
Q Consensus       382 pl~~aa-a~aal-~~~~~-----~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~--~~~~~~----  448 (514)
                      .+.+.+ ++.++ ..+++     +.+.+.++++.+.+.+.|. +   ++......-|.++++++....  .....+    
T Consensus       387 ~~~Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~l~~~L~-~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl  462 (546)
T 2zy4_A          387 TPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELG-M---PPLRDENAVDYYTLIDLQDVTAKLYGEAFSEWA  462 (546)
T ss_dssp             HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHGGGT-S---SCCCCTTBCCSEEEEEHHHHHHHHHCHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC-C---CcccCCCCeeEEEEEEHHHhhcccccHHHHHHh
Confidence            444443 22111 22221     2345556666666666664 2   111111233556677764200  000000    


Q ss_pred             CCccchHHHHHHHHHHCCcEEEeeC------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 010250          449 PPEWGIGAYFGAQCEKHGMLVRVSG------DNIMMSPPFIMSPEEVDELISKYGKALKATEERVK  508 (514)
Q Consensus       449 ~~~~~~~~~~~~~l~~~Gv~~~~~g------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~~  508 (514)
                      .........+.+.+.++||.+.|+.      +.+||+.. ..+++++++++++|++++++..++.+
T Consensus       463 ~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~-~~~~e~i~~~~~~l~~~l~~~~~~~~  527 (546)
T 2zy4_A          463 VKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLA-NLNEYEYAAIGRALRKMADELYAEYS  527 (546)
T ss_dssp             HHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESS-SSCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             hccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEec-cCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            0000012346677889999999852      46999964 45899999999999999887765443

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=99.73  E-value=1.3e-15  Score=161.69  Aligned_cols=359  Identities=14%  Similarity=0.059  Sum_probs=194.1

Q ss_pred             CCHHHH-HHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC-CCCeEEEeCChhHHHHHHHHHHHHHH----hhcC
Q 010250          117 SEPRLV-AAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS-KMAKVFFTNSGSEANDTQVKLVWYYN----NALG  190 (514)
Q Consensus       117 ~~p~v~-~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~-~~~~v~~~~sGseA~~~Alk~a~~~~----~~~~  190 (514)
                      .+|.++ +++...++...+.+...........+++++++++++.. +.+.++|++||++|+..|+..++...    +..|
T Consensus       107 ~~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G  186 (511)
T 3vp6_A          107 DIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKG  186 (511)
T ss_dssp             CHHHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHC
T ss_pred             cHHHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcC
Confidence            345444 55666665433221111111233344556667766432 23589999999999999999887531    1112


Q ss_pred             CC-CccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh--
Q 010250          191 RP-NKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE--  267 (514)
Q Consensus       191 ~~-~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~--  267 (514)
                      -+ ..+.+|+.+...|.+...+....|...         ..+..++....++             .++++|++.+.+.  
T Consensus       187 ~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~---------~~~~~v~~d~~~~-------------~d~~~Le~~i~~~~~  244 (511)
T 3vp6_A          187 MAAVPKLVLFTSEQSHYSIKKAGAALGFGT---------DNVILIKCNERGK-------------IIPADFEAKILEAKQ  244 (511)
T ss_dssp             GGGSCCEEEEEETTSCTHHHHHHHHTTSCG---------GGEEEECBCTTSC-------------BCHHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECCCchHHHHHHHHHcCCCC---------CcEEEeecCCCCc-------------cCHHHHHHHHHHHHh
Confidence            11 123455555556665444443333210         0111122211111             1258888888643  


Q ss_pred             CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC-CCchhch--hhhhcC
Q 010250          268 GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSF--AKALSS  344 (514)
Q Consensus       268 ~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv-~pDiv~~--sK~l~g  344 (514)
                      ....+.+|++...++..|.+.|    |++|.++|++||+++++|++|.|.......+.....|+ ..|.+++  .|.+++
T Consensus       245 ~g~~~~~vv~~~~~~~~G~vd~----l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~  320 (511)
T 3vp6_A          245 KGYVPFYVNATAGTTVYGAFDP----IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGV  320 (511)
T ss_dssp             TTCEEEEEEEEBSCSSSCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCC
T ss_pred             cCCCcEEEEEecCCCCCccccc----HHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCC
Confidence            2233778888888888898876    99999999999999999999985422222121222233 3577754  598887


Q ss_pred             CcccceeEEeCH-HHHHHhhhc-cCCCCc-------------ccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q 010250          345 AYMPIGAILVSP-EVSEVIHSQ-SNTLGS-------------FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAP  409 (514)
Q Consensus       345 G~~pig~v~~~~-~i~~~l~~~-~~~~~~-------------~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~  409 (514)
                      + ...|++++++ +++...... ......             +....+.....+++.+++.++..-.-+++.++..++.+
T Consensus       321 p-~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~  399 (511)
T 3vp6_A          321 L-LQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAE  399 (511)
T ss_dssp             C-SCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C-cCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence            6 5678888765 444443211 111000             00000001223444444433321112456788888899


Q ss_pred             HHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCc-----cchHHHHHHHHHHCCcEEEe---e-C--CEEEE
Q 010250          410 KFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPE-----WGIGAYFGAQCEKHGMLVRV---S-G--DNIMM  478 (514)
Q Consensus       410 ~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~Gv~~~~---~-g--~~iRi  478 (514)
                      ++++.|+++.+..++........++.+.+.+...........     ......+.+.|.++|+++..   . +  +.+|+
T Consensus       400 ~l~~~L~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi  479 (511)
T 3vp6_A          400 YLYAKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRM  479 (511)
T ss_dssp             HHHHHHHSCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEE
Confidence            999999865222221100123444555543321110000000     01134578889999965442   1 2  25999


Q ss_pred             eC-CCCCCHHHHHHHHHHHHHHHHH
Q 010250          479 SP-PFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       479 ~p-~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +. ....|++||+.+++.|++.-+.
T Consensus       480 ~~~~~~~t~~di~~ll~~i~~~~~~  504 (511)
T 3vp6_A          480 VISNPAATQSDIDFLIEEIERLGQD  504 (511)
T ss_dssp             CCCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred             EecCCCCCHHHHHHHHHHHHHHHHh
Confidence            98 5778999999999999877654

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=99.72  E-value=4e-16  Score=163.30  Aligned_cols=293  Identities=13%  Similarity=0.042  Sum_probs=173.9

Q ss_pred             hHHHHHHHHHHhcCcCCCCeEEEeCChh-HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250          145 PSLDLAKELLEMFTASKMAKVFFTNSGS-EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK  223 (514)
Q Consensus       145 ~~~ela~~L~~~~~~~~~~~v~~~~sGs-eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~  223 (514)
                      ...++.++++++++. +.+ ++|+++|+ .++..++..++.+.      +++.||+.+. .|.+...++...|.....  
T Consensus       134 ~~~~~~~~la~~~g~-~~~-~~~t~g~te~a~~~al~~~~~~~------~~~~vi~~~~-~h~s~~~~~~~~G~~~~~--  202 (456)
T 2z67_A          134 LTNKILESFFKQLGL-NVH-AIATPISTGMSISLCLSAARKKY------GSNVVIYPYA-SHKSPIKAVSFVGMNMRL--  202 (456)
T ss_dssp             HHHHHHHHHHHHTTC-CCE-EEEESSCHHHHHHHHHHHHHHHH------CCCEEEEECC-CCHHHHHHHHHTTCEEEE--
T ss_pred             HHHHHHHHHHHHcCC-CCC-EEEeCcHHHHHHHHHHHHHHHhc------CCCEEEEECC-CcHHHHHHHHHcCCCceE--
Confidence            345677888888743 223 99999999 46666777654321      2345666666 555433333322321110  


Q ss_pred             CCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHH-HHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          224 FDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLI-LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li-~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                             +...+....++             .++++|++++ ......++.+|++...++..|.+.|    +++|.++|+
T Consensus       203 -------v~~~~~~~~~~-------------~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~----l~~I~~la~  258 (456)
T 2z67_A          203 -------VETVLDGDRVY-------------VPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD----IVEIAKICE  258 (456)
T ss_dssp             -------ECCEEETTEEE-------------CCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC----HHHHHHHHH
T ss_pred             -------EEEeccCCCCC-------------cCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC----HHHHHHHHH
Confidence                   00000011111             1257888888 3211124556655555567788877    999999999


Q ss_pred             hcCCEEEEechhcCcccccc-cceecc-cCCCCchhch--hhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccCC
Q 010250          303 KYDILFIADEVICAFGRLGT-MFGCDK-YSIKPDLVSF--AKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFT  377 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~-~~~~~~-~gv~pDiv~~--sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t  377 (514)
                      +||+++|+||++.++. .|. ...... .+ .+|++++  .|.+.++ +++|++++ ++++++.+.+.       ..+. 
T Consensus       259 ~~g~~v~vD~A~~~~~-~g~~~~~~~~~~~-~~D~~~~s~hK~~~~p-~g~G~l~~~~~~~~~~l~~~-------~~g~-  327 (456)
T 2z67_A          259 NYDIPHIINGAYAIQN-NYYLEKLKKAFKY-RVDAVVSSSDKNLLTP-IGGGLVYSTDAEFIKEISLS-------YPGR-  327 (456)
T ss_dssp             HHTCCEEEECTTTTTC-HHHHHHHHHHHTS-CCSEEEEEHHHHHCCC-SSCEEEEESCHHHHHHHHTT-------SCSC-
T ss_pred             HcCCcEEEECcchHHH-HHhhHHHHHhhCC-CCCEEEEcCCCCcCCC-CCeEEEEEcCHHHHhhcCcC-------CCCC-
Confidence            9999999999987552 221 111111 12 5787765  6987766 78999999 57888777531       1222 


Q ss_pred             CCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhcc---CCCceeEEEeeeeeEEEEEccCCCCCCCCCCc
Q 010250          378 YSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFS---DSPIIGEIRGTGLILGTEFADNKSPNEPFPPE  451 (514)
Q Consensus       378 ~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~---~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~  451 (514)
                      .++++  ..++.+++..+..   +++.++..++.+++.+.|+++.   ...+..   .. .++.+.+....         
T Consensus       328 ~~~~~--~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~v~~---~~-~~v~~~~~~~~---------  392 (456)
T 2z67_A          328 ASATP--VVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLD---VE-SPIASCISVNS---------  392 (456)
T ss_dssp             BCSHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCBCC---CC-CSSEEEEECSS---------
T ss_pred             CCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCEecC---CC-CeEEEEEeccc---------
Confidence            22233  2233344444332   3467888889999999998773   322221   11 34455552111         


Q ss_pred             cchHHHHHHHHHHCCc---EEE------------e-eCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          452 WGIGAYFGAQCEKHGM---LVR------------V-SGDNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       452 ~~~~~~~~~~l~~~Gv---~~~------------~-~g~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                        ....+.+.|.++|+   -+.            . ....+|++..+.+|++|||+++++|++++
T Consensus       393 --~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~  455 (456)
T 2z67_A          393 --DPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL  455 (456)
T ss_dssp             --CHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred             --HHHHHHHHHHHcCCCcceEEeecCccccccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence              02357788889885   232            1 13579999888899999999999998754

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=99.71  E-value=1.7e-15  Score=160.45  Aligned_cols=344  Identities=14%  Similarity=0.032  Sum_probs=192.4

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC-CCC---eEEEeCChhHHHHHHHHHHHHHHhh----
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS-KMA---KVFFTNSGSEANDTQVKLVWYYNNA----  188 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~-~~~---~v~~~~sGseA~~~Alk~a~~~~~~----  188 (514)
                      .+|.+.+++.+.+.........+....+...++.++++++++.. ..+   ...+++||+||+..++..++..+..    
T Consensus        68 ~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~  147 (502)
T 3hbx_A           68 MEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKA  147 (502)
T ss_dssp             CCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHh
Confidence            58899999998876532221111112333445667788877432 012   3457999999999999877533211    


Q ss_pred             cCC-CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc-ccCCCCCCChhHHHHHHHHHHHHHHHH
Q 010250          189 LGR-PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY-WRYAHPGETEEEYSTRLANNLEDLILK  266 (514)
Q Consensus       189 ~~~-~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~le~li~~  266 (514)
                      .|. ..+..||+.+.+ |.+...+....|...            ..+++... ++             .++++|++.+. 
T Consensus       148 ~G~~~~~~~vi~~~~~-h~s~~~~~~~~G~~~------------~~v~~~~~~~~-------------~d~~~l~~~i~-  200 (502)
T 3hbx_A          148 EGKPVDKPNIVTGANV-QVCWEKFARYFEVEL------------KEVKLSEGYYV-------------MDPQQAVDMVD-  200 (502)
T ss_dssp             TTCCCSCCEEEEETTC-CHHHHHHHHHTTCEE------------EEECCBTTBCS-------------CCHHHHHHHCC-
T ss_pred             cCCCCCCcEEEEcCCc-hHHHHHHHHHcCcee------------EEEecCCCcCc-------------CCHHHHHHHHh-
Confidence            121 123356665555 443332332233211            11111110 11             01466776664 


Q ss_pred             hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc------CCEEEEechhcCccc--ccccceecccCCCCchhch
Q 010250          267 EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY------DILFIADEVICAFGR--LGTMFGCDKYSIKPDLVSF  338 (514)
Q Consensus       267 ~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~------gillI~DEv~tG~gr--~G~~~~~~~~gv~pDiv~~  338 (514)
                         +++.+|++...++..|.+.|    +++|.++|++|      |+++++|++|.|+..  ..........-...|.+++
T Consensus       201 ---~~t~~v~~~~~~n~tG~~~~----l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~  273 (502)
T 3hbx_A          201 ---ENTICVAAILGSTLNGEFED----VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINV  273 (502)
T ss_dssp             ---TTEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEE
T ss_pred             ---hCCEEEEEecCCCCCCcccC----HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEE
Confidence               34566666666666788877    99999999999      999999999986531  1111111111112465543


Q ss_pred             --hhhhcCCcccceeEEeC-HHHH-HHhhhccCCCCcccccCC--CCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHH
Q 010250          339 --AKALSSAYMPIGAILVS-PEVS-EVIHSQSNTLGSFSHGFT--YSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAP  409 (514)
Q Consensus       339 --sK~l~gG~~pig~v~~~-~~i~-~~l~~~~~~~~~~~~~~t--~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~  409 (514)
                        .|.+.++ ..+|+++.+ ++.+ +.+.......+......+  ++.+....++..++++.+..   .+..++..++.+
T Consensus       274 s~hK~l~~p-~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~  352 (502)
T 3hbx_A          274 SGHKYGLVY-AGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMI  352 (502)
T ss_dssp             ETTTTTCCC-SSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcccccCCC-CCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence              4766555 678887775 4433 222111111111110111  22222233444455554433   345677788888


Q ss_pred             HHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------C-CEEEEeCC
Q 010250          410 KFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------G-DNIMMSPP  481 (514)
Q Consensus       410 ~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g-~~iRi~p~  481 (514)
                      +|.+.|+++....++.. .....++.+.+.+....         ....+.+.|.++|+++...       + ..+|++..
T Consensus       353 ~l~~~L~~~~~~~~~~~-~~~~~~v~f~~~~~~~~---------~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~  422 (502)
T 3hbx_A          353 VLREGLEKTERFNIVSK-DEGVPLVAFSLKDSSCH---------TEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIR  422 (502)
T ss_dssp             HHHHHHHTTTCEEECSC-SSSSSEEEEEESSCSSC---------CHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECC
T ss_pred             HHHHHHHhCCCEEEEeC-CCCceEEEEEecCCCcC---------CHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeC
Confidence            99998887622111111 01344666766542110         1346888999999986421       1 35999998


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          482 FIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       482 ~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      ..+|++|++.+++.|+++++++.+
T Consensus       423 ~~~t~edid~li~~L~~~l~~l~~  446 (502)
T 3hbx_A          423 EDFSRTLAERLVIDIEKVMRELDE  446 (502)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHh
Confidence            899999999999999999987653

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.71  E-value=2.4e-17  Score=166.56  Aligned_cols=317  Identities=11%  Similarity=0.029  Sum_probs=187.2

Q ss_pred             CCCHHHHHHHHHHHhcCC----ccccc---cccCCchHHHHHHHHHHhcCcCCCCeEEEeCCh-hHHHHHHHHHHHHHHh
Q 010250          116 GSEPRLVAAATAQLNTLP----FYHSF---WNRTTKPSLDLAKELLEMFTASKMAKVFFTNSG-SEANDTQVKLVWYYNN  187 (514)
Q Consensus       116 h~~p~v~~A~~~~l~~~~----~~~~~---~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sG-seA~~~Alk~a~~~~~  187 (514)
                      ..+|.|++|+.+.+++..    ..+..   .....+...+++++++++++....+++++++++ ++|++.++....    
T Consensus        13 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~~l~----   88 (360)
T 1w23_A           13 ALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLL----   88 (360)
T ss_dssp             CCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC----
T ss_pred             CCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHHHhc----
Confidence            368999999999886420    00000   111223466888999998854334589999887 999999887652    


Q ss_pred             hcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHH-HHHH
Q 010250          188 ALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED-LILK  266 (514)
Q Consensus       188 ~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~-li~~  266 (514)
                        .+.++...|......|.....+ ...| ...            .++......            ..+.+++++ .+  
T Consensus        89 --~~~~~g~~vi~~~~~~~~~~~~-~~~g-~~~------------~v~~~~~~~------------~~d~~~l~~~~i--  138 (360)
T 1w23_A           89 --TKGTIGNYVLTGSWSEKALKEA-KLLG-ETH------------IAASTKANS------------YQSIPDFSEFQL--  138 (360)
T ss_dssp             --CTTCEEEEEECSHHHHHHHHHH-HTTS-EEE------------EEEECGGGT------------SCSCCCGGGCCC--
T ss_pred             --CCCCcccEEEecchhHHHHHHH-HHhC-CeE------------EeecccccC------------cCCccchHhhcc--
Confidence              1112223333322222221111 1111 110            111100000            001234444 33  


Q ss_pred             hCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcC
Q 010250          267 EGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSS  344 (514)
Q Consensus       267 ~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~g  344 (514)
                        .+++++|++..+++.+|.+.+         +|+++||+++|+||+|+.+...   .....  .  |+++  ++|.++.
T Consensus       139 --~~~~k~v~~~~~~nptG~~~~---------~i~~~~~~~li~D~a~~~~~~~---~~~~~--~--di~~~s~sK~~~~  200 (360)
T 1w23_A          139 --NENDAYLHITSNNTIYGTQYQ---------NFPEINHAPLIADMSSDILSRP---LKVNQ--F--GMIYAGAQKNLGP  200 (360)
T ss_dssp             --CTTEEEEEEESEETTTTEECS---------SCCCCCSSCEEEECTTTTTSSC---CCGGG--C--SEEEEETTTTTSC
T ss_pred             --CCCCCEEEEeCCCCCcceecc---------cccccCCceEEEechhhcCCCC---cCccc--C--CEEEEEcccccCC
Confidence              245778888888888898765         2233899999999999843221   11111  1  6664  5698864


Q ss_pred             CcccceeEEeCHHHHHHhhhccCCCCccc-------ccCCC-CCcHHHHHHHHHHHHHHhh----ccHHHHHHHHHHHHH
Q 010250          345 AYMPIGAILVSPEVSEVIHSQSNTLGSFS-------HGFTY-SGHPVSCAVAIEALKIYKE----RNIVEQVNKIAPKFQ  412 (514)
Q Consensus       345 G~~pig~v~~~~~i~~~l~~~~~~~~~~~-------~~~t~-~~~pl~~aaa~aal~~~~~----~~~~~~~~~~~~~l~  412 (514)
                        .++|++++++++++.+....   +...       .+.++ +.+..+++++.++++.+.+    +++.++++++.+++.
T Consensus       201 --~G~G~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~  275 (360)
T 1w23_A          201 --SGVTVVIVKKDLLNTKVEQV---PTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIY  275 (360)
T ss_dssp             --TTCEEEEEEHHHHCSCCTTC---CGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred             --CCcEEEEEcHHHHhhcccCC---cchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence              34899999999877664311   0000       12333 3356666777788887654    246778888888888


Q ss_pred             hhhhhccCCCceeEE--E-ee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CEEEEeCCCCCC
Q 010250          413 DGVKAFSDSPIIGEI--R-GT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMS  485 (514)
Q Consensus       413 ~~L~~l~~~~~~~~v--~-g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~iRi~p~~~~t  485 (514)
                      +.|+++..  +....  . .. +.++.+.+.+.           .....+.+.|.++||.+.++.   +.||+++....|
T Consensus       276 ~~L~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~~~gi~~~~~~~~~~~iRis~~~~~~  342 (360)
T 1w23_A          276 DTIDESNG--FYVGHAEKGSRSLMNVTFNLRNE-----------ELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVP  342 (360)
T ss_dssp             HHHHTTTT--SSEESSCGGGBCSSEEEEECSSH-----------HHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSC
T ss_pred             HHHHHccC--cccccCCchhccCcEEEEEcCCC-----------ccHHHHHHHHHHCCeeeecCCCCCCeEEEEecCCCC
Confidence            88887621  21110  1 12 34677766421           014457788899999987653   569999988889


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 010250          486 PEEVDELISKYGKALKA  502 (514)
Q Consensus       486 ~e~id~~~~~l~~~l~~  502 (514)
                      ++++++++++|++++++
T Consensus       343 ~~~i~~~~~~l~~~~~~  359 (360)
T 1w23_A          343 IDACIALRELMIQFKEN  359 (360)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            99999999999987753

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=99.71  E-value=2e-16  Score=162.70  Aligned_cols=334  Identities=11%  Similarity=0.073  Sum_probs=193.1

Q ss_pred             EEEEccCCcccccCCC--CCHHHHHHHHHHH-hc-CCccccccccCCchHHHHHHHHHHhcCcC-----CCC--eEEEeC
Q 010250          101 KYLDSLAGLWCTALGG--SEPRLVAAATAQL-NT-LPFYHSFWNRTTKPSLDLAKELLEMFTAS-----KMA--KVFFTN  169 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh--~~p~v~~A~~~~l-~~-~~~~~~~~~~~~~~~~ela~~L~~~~~~~-----~~~--~v~~~~  169 (514)
                      ..|||..|.....-|.  ..+.|.+|.. .+ +. ..+.+.    +.....+|.+.+++++...     ..+  .++.++
T Consensus        30 ~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~----~~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~  104 (405)
T 3k7y_A           30 EKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYL----LGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCI  104 (405)
T ss_dssp             SCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCC----TTSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEE
T ss_pred             CcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCC----CCCCcHHHHHHHHHHHcCCCCccccccceEEEEcC
Confidence            4688876643233342  4677888766 43 22 222111    1222345555555544111     223  368999


Q ss_pred             ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCCCC
Q 010250          170 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHPGE  247 (514)
Q Consensus       170 sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  247 (514)
                      +|++|+..++++....      .+ +.|++.+++|.+........+....             .+++  +..|.      
T Consensus       105 G~~~al~~~~~~l~~~------~~-d~Vlv~~P~y~~~~~~~~~~g~~~~-------------~v~~~~~~~~~------  158 (405)
T 3k7y_A          105 GGTGAIFVLLEFLKML------NV-ETLYVTNPPYINHVNMIESRGFNLK-------------YINFFDYNLID------  158 (405)
T ss_dssp             HHHHHHHHHHHHHHTT------TC-CEEEEESSCCHHHHHHHHTTTCEEE-------------EECCEETTTTE------
T ss_pred             chHHHHHHHHHHHHhc------CC-CEEEEeCCCCHhHHHHHHHcCCeEE-------------EEeccccccCC------
Confidence            9999999999876511      14 8999999999887544333222111             1111  00011      


Q ss_pred             ChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcc-ccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc---c
Q 010250          248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT---M  323 (514)
Q Consensus       248 ~~~~~~~~~~~~le~li~~~~~~~~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~---~  323 (514)
                             .++++|++.+.+.  .+..++++.| .+|.+|.+ .+++.+++|.++|++||+++|+||+|.+|...+.   .
T Consensus       159 -------~d~~~l~~~l~~~--~~~~~i~l~~~~~NPTG~~-~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~  228 (405)
T 3k7y_A          159 -------INYDLFLNDLRNI--PNGSSVILQISCYNPCSVN-IEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDV  228 (405)
T ss_dssp             -------ECHHHHHHHHHHS--CSSCEEEECCSSCTTTCCC-CCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGG
T ss_pred             -------cCHHHHHHHHHhC--CCCeEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccch
Confidence                   1147777777642  1234566655 46878865 5678999999999999999999999998854321   1


Q ss_pred             ceecc-cCCCCchh---chhhhhc-CCcccceeEEe---CHHHHHHhhhccCCCCcccccCCCC-CcHHHHHHHHHHHHH
Q 010250          324 FGCDK-YSIKPDLV---SFAKALS-SAYMPIGAILV---SPEVSEVIHSQSNTLGSFSHGFTYS-GHPVSCAVAIEALKI  394 (514)
Q Consensus       324 ~~~~~-~gv~pDiv---~~sK~l~-gG~~pig~v~~---~~~i~~~l~~~~~~~~~~~~~~t~~-~~pl~~aaa~aal~~  394 (514)
                      ..... ....+.++   +|||.++ .| +++|++++   ++++++.+...-   .. ....+++ .+.+++.++.++|+.
T Consensus       229 ~~~~~~~~~~~~~i~~~S~SK~~~l~G-lRiG~~~~~~~~~~~~~~~~~~l---~~-~~~~~~~~~~~~~q~~~~~~l~~  303 (405)
T 3k7y_A          229 LLIRKFEEKNIAFSVCQSFSKNMSLYG-ERAGALHIVCKNQEEKKIVFNNL---CF-IVRKFYSSPVIHTNRILCQLLNN  303 (405)
T ss_dssp             HHHHHHHTTTCCEEEEEECTTTSCCTT-TTEEEEEEECSSHHHHHHHHHHH---HH-HHHTTTSSCCHHHHHHHHHHHHC
T ss_pred             HHHHHHHhcCCcEEEEeeCCccCCCcc-ccceEEEEEeCCHHHHHHHHHHH---HH-HHhcccCCCcHHHHHHHHHHhCC
Confidence            11111 12223333   6899887 34 99999754   677665543210   00 1112333 345666666666642


Q ss_pred             H------hh--ccHHHHHHHHHHHHHhhhh----hccCCCc-eeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHH
Q 010250          395 Y------KE--RNIVEQVNKIAPKFQDGVK----AFSDSPI-IGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGA  460 (514)
Q Consensus       395 ~------~~--~~~~~~~~~~~~~l~~~L~----~l~~~~~-~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~  460 (514)
                      -      .+  ..+.++++++++.+.+.|+    ++. .+. ....... |+++++.+..                .++.
T Consensus       304 ~~l~~~~~~~l~~~~~~~~~~R~~l~~~L~~~~~~~g-~~~~~~~~~p~gg~f~~~~l~~----------------~~~~  366 (405)
T 3k7y_A          304 QNLKLNWIKELSQLSQRITNNRILFFNKLETYQKKYN-LNYDWNVYKKQRGLFSFVPLLA----------------KIAE  366 (405)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGT-CCCCGGGGSSCCSSEEECGGGG----------------GGTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC-CCCCCccccCCceEEEecCCCH----------------HHHH
Confidence            1      11  2345667888888888888    651 110 1112233 4444443321                1224


Q ss_pred             HHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          461 QCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       461 ~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      .|.++||++.|++   ||+.. ..++++|++++++|.++++
T Consensus       367 ~L~~~gV~v~p~~---Ris~a-~~~~~~i~~~~~~i~~~~~  403 (405)
T 3k7y_A          367 HLKTHHIYIINNG---RINVS-GITKNNVDYIADKICLSLS  403 (405)
T ss_dssp             TTTTTTEECCTTS---EEEGG-GCCTTHHHHHHHHHHHHHH
T ss_pred             HHHHCCEeecCCC---eEEEe-ccCHHHHHHHHHHHHHHHh
Confidence            4578899999865   88831 3688999999999999875

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=99.71  E-value=9.7e-17  Score=165.41  Aligned_cols=350  Identities=11%  Similarity=0.063  Sum_probs=189.4

Q ss_pred             EEEccCCcccccCCCC--CHHHHHHHHHHHhcC-CccccccccCCchHHHHHHHHHHhcCc----CCCCeEEEeCChhHH
Q 010250          102 YLDSLAGLWCTALGGS--EPRLVAAATAQLNTL-PFYHSFWNRTTKPSLDLAKELLEMFTA----SKMAKVFFTNSGSEA  174 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~--~p~v~~A~~~~l~~~-~~~~~~~~~~~~~~~ela~~L~~~~~~----~~~~~v~~~~sGseA  174 (514)
                      -+|+.-|.+-..-|..  .|.|.+|....++.. .+.+.    +.....+|.+.+++++.+    .+.....-+.+|+.|
T Consensus        46 kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~----p~~G~p~lr~aia~~~~g~~~~~~~~~~~qt~ggtga  121 (420)
T 4h51_A           46 KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYL----PISGYQPFIDEAVKIIYGNTVELENLVAVQTLSGTGA  121 (420)
T ss_dssp             CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCC----CTTCCHHHHHHHHHHHHC---CGGGEEEEEEEHHHHH
T ss_pred             CEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCC----CcCChHHHHHHHHHHhcCCCccccccceeeecCchHH
Confidence            3555544433444532  367888876666542 22111    223335565666554311    122234457899999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      ...++.++...    ...+.+.|++.+++|..+.......++.+.....+.      .    +..+             .
T Consensus       122 ~~~a~~~l~~~----~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~------~----~~~~-------------~  174 (420)
T 4h51_A          122 VSLGAKLLTRV----FDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYY------D----PKTV-------------S  174 (420)
T ss_dssp             HHHHHHHHTTT----SCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECE------E----GGGT-------------E
T ss_pred             HHHHHHHHHHh----cCCCCCEEEEecCCchhHHHHHHHcCCeEEEeeccc------c----cccc-------------C
Confidence            98888766321    112356799999999776543333333221100000      0    0000             0


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc---cceecc-cC
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT---MFGCDK-YS  330 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~---~~~~~~-~g  330 (514)
                      .+.+.+.+.+....+ ...+++..+.+|.+|. .++++.+++|.++|+++++++|+||+|.||...+.   .+.... .+
T Consensus       175 ~d~~~~~~~l~~~~~-~~~vll~~~p~NPtG~-~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~  252 (420)
T 4h51_A          175 LNFEGMKKDILAAPD-GSVFILHQCAHNPTGV-DPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFAR  252 (420)
T ss_dssp             ECHHHHHHHHHHSCS-SCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHH
T ss_pred             CCHHHHHHHHhccCC-CcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHh
Confidence            013445555554443 4455666666666674 45789999999999999999999999999954332   111111 11


Q ss_pred             CCCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCC-cHHHHHHHHHHHHH--H----hh--c
Q 010250          331 IKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG-HPVSCAVAIEALKI--Y----KE--R  398 (514)
Q Consensus       331 v~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~-~pl~~aaa~aal~~--~----~~--~  398 (514)
                      ..+.++   +|||.++-.++++|++++..+..+.......+. ......+++. +..++.++...+..  +    ++  +
T Consensus       253 ~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l-~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~  331 (420)
T 4h51_A          253 RGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVM-DSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELS  331 (420)
T ss_dssp             TTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHH-HHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred             hCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHH-HHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence            222333   689976653399999887543322221100000 0011233433 33444444444421  1    11  2


Q ss_pred             cHHHHHHHHHHHHHhhhhhcc-CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEE
Q 010250          399 NIVEQVNKIAPKFQDGVKAFS-DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIM  477 (514)
Q Consensus       399 ~~~~~~~~~~~~l~~~L~~l~-~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iR  477 (514)
                      .+.++++++++.|.+.|+++. ......-....|+|..+-+.                ...++.|.++||++.+.|   |
T Consensus       332 ~m~~r~~~~R~~l~~~L~~~g~~~~~~~i~~q~GmF~~~gls----------------~e~v~~L~e~~Vy~~~~g---R  392 (420)
T 4h51_A          332 AMAERIRTMRRTVYDELLRLQTPGSWEHVINQIGMFSFLGLS----------------KAQCEYCQNHNIFITVSG---R  392 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHCCSSEEECCCC----------------HHHHHHHHHTTEECCTTC---E
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCCCCeecCCCceEEecCcC----------------HHHHHHHHhCCEEEcCCC---E
Confidence            456778888888888888761 11110011234554432221                123467889999887765   8


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      |+.. ..+++.|+.++++|.++++++.+
T Consensus       393 is~A-gl~~~ni~~~a~aI~~vvr~i~r  419 (420)
T 4h51_A          393 ANMA-GLTHETALMLAQTINDAVRNVNR  419 (420)
T ss_dssp             EEGG-GCCHHHHHHHHHHHHHHHC----
T ss_pred             EEec-cCCHHHHHHHHHHHHHHHHHhhc
Confidence            8842 47999999999999999987754

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.70  E-value=2.9e-16  Score=161.16  Aligned_cols=317  Identities=12%  Similarity=0.052  Sum_probs=186.7

Q ss_pred             CCHHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhhcCCCCc
Q 010250          117 SEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNALGRPNK  194 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~~~~~~~  194 (514)
                      .+|+|++|+.+....... .+. +....+...++.++++++++....++++| ++||++|++.+++.+.        .+ 
T Consensus        51 ~~~~v~~a~~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~--------~~-  120 (398)
T 2fyf_A           51 VRLEQLQTLTTTAAALFGTSHR-QAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLI--------DK-  120 (398)
T ss_dssp             CCHHHHHGGGTTTTTTTTSCTT-SHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTC--------SS-
T ss_pred             CCHHHHHHHhhcCCCccCcCcC-CHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhc--------CC-
Confidence            578899988763211110 111 11112345788899999885432358998 9999999999998763        11 


Q ss_pred             cEEEEEecCCcccceeee-ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEE
Q 010250          195 KKFIARQKSYHGSTLIAA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIA  273 (514)
Q Consensus       195 ~~ii~~~~~yHG~t~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~a  273 (514)
                      . ++.....+|+...... ...+       ++   ..+..++.++.+.   .    +       .+    +   . ++++
T Consensus       121 g-v~~v~~~~~~~~~~~~~~~~~-------~g---~~~~~v~~~~g~~---~----~-------~~----i---~-~~~~  167 (398)
T 2fyf_A          121 R-SLHLTYGEFSAKFASAVSKNP-------FV---GEPIIITSDPGSA---P----E-------PQ----T---D-PSVD  167 (398)
T ss_dssp             C-EEEEECSHHHHHHHHHHHHCT-------TS---CCCEEEECCTTCC---C----C-------CC----C---C-TTCS
T ss_pred             C-eEEEeCCHHHHHHHHHHHHhC-------CC---CceEEEecCCCCC---C----C-------cc----c---c-CCCC
Confidence            2 3333666775421111 1000       00   0011111111000   0    0       00    1   1 3456


Q ss_pred             EEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCccccee
Q 010250          274 AFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAYMPIGA  351 (514)
Q Consensus       274 avivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~~pig~  351 (514)
                      +|++...++.+|.+.+    +++|.++   ||+++|+||+|+.+...   .  +..  .+|+++  ++|.++.++ .+|+
T Consensus       168 ~v~~~~~~nptG~~~~----~~~i~~~---~~~~vivD~a~~~~~~~---~--~~~--~~di~~~s~sK~~~~~g-g~g~  232 (398)
T 2fyf_A          168 VIAWAHNETSTGVAVA----VRRPEGS---DDALVVIDATSGAGGLP---V--DIA--ETDAYYFAPQKNFASDG-GLWL  232 (398)
T ss_dssp             EEEEESEETTTTEECC----CCCCTTC---C-CEEEEECTTTTTTSC---C--CGG--GCSEEEECTTSTTCSCS-SEEE
T ss_pred             EEEEeCcCCCcceecc----hHHhhhh---cCCeEEEEeccccCCcc---c--Ccc--cCcEEEEecCcccCCCC-ceEE
Confidence            6777777888898887    4455554   89999999999843221   1  111  267775  559988762 5899


Q ss_pred             EEeCHHHHHHhhhcc---CCCCccc----------ccCCC-CCcHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Q 010250          352 ILVSPEVSEVIHSQS---NTLGSFS----------HGFTY-SGHPVSCAVAIEALKIYKER----NIVEQVNKIAPKFQD  413 (514)
Q Consensus       352 v~~~~~i~~~l~~~~---~~~~~~~----------~~~t~-~~~pl~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~  413 (514)
                      +++++++++.+....   .....+.          .+.++ +.+..+++++.++|+.+.+.    ++.++.+++++++.+
T Consensus       233 l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~  312 (398)
T 2fyf_A          233 AIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYS  312 (398)
T ss_dssp             EEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred             EEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence            999999888764210   0000000          12333 34566677777888876543    357788888889999


Q ss_pred             hhhhccCCCcee-EEEeeee-eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCH
Q 010250          414 GVKAFSDSPIIG-EIRGTGL-ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSP  486 (514)
Q Consensus       414 ~L~~l~~~~~~~-~v~g~g~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~  486 (514)
                      .|+++....+.. ...+.+. ++.+.+.+..           ....+.+.|.++||.++++     ++.||+++...+|+
T Consensus       313 ~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~~~~t~  381 (398)
T 2fyf_A          313 WAQERPYTTPFVTDPGLRSQVVGTIDFVDDV-----------DAGTVAKILRANGIVDTEPYRKLGRNQLRVAMFPAVEP  381 (398)
T ss_dssp             HHHHSTTEEESCCSGGGBCSSEEEEEECTTS-----------CHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECCTTSCH
T ss_pred             HHHHcCCceeccCChhhcCCcEEEEECCCCC-----------CHHHHHHHHHHCCcEEecCcccCCCCEEEEEecCCCCH
Confidence            888762211110 0001233 7777774311           1456888999999999753     35799998888899


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010250          487 EEVDELISKYGKALKA  502 (514)
Q Consensus       487 e~id~~~~~l~~~l~~  502 (514)
                      +|+++++++|++++++
T Consensus       382 e~i~~~~~~l~~~l~~  397 (398)
T 2fyf_A          382 DDVSALTECVDWVVER  397 (398)
T ss_dssp             HHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999988754

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.70  E-value=6e-16  Score=163.06  Aligned_cols=327  Identities=13%  Similarity=0.069  Sum_probs=186.0

Q ss_pred             CCCHHHHHHHHHHHhcCC-ccc---cccccC---CchHHHHHHHHHHhcCcCCCC---eEEEeCChhHHHHHHHHHHHHH
Q 010250          116 GSEPRLVAAATAQLNTLP-FYH---SFWNRT---TKPSLDLAKELLEMFTASKMA---KVFFTNSGSEANDTQVKLVWYY  185 (514)
Q Consensus       116 h~~p~v~~A~~~~l~~~~-~~~---~~~~~~---~~~~~ela~~L~~~~~~~~~~---~v~~~~sGseA~~~Alk~a~~~  185 (514)
                      ..+|.|++|+.+.+.+.. ..+   ..+++.   ........++++++++. +.+   ..+..+||++|+..++....  
T Consensus        55 ~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~-~~~~~~~~V~~~sGs~an~~~~~all--  131 (483)
T 1rv3_A           55 FASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGL-DPQCWGVNVQPYSGSPANFAVYTALV--  131 (483)
T ss_dssp             CCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTC-CTTTEEEECCCSSHHHHHHHHHHHHT--
T ss_pred             CCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCC-CcccCceEEEECCcHHHHHHHHHHhc--
Confidence            358999999998886521 111   122211   11223344788888743 232   22556677789888887653  


Q ss_pred             HhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC---CcccCCCCCCChhHHHHHHHHHHHH
Q 010250          186 NNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP---HYWRYAHPGETEEEYSTRLANNLED  262 (514)
Q Consensus       186 ~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~le~  262 (514)
                            ..+++||+.+..|.|................+     ..+..++++   ..+.             .++++|++
T Consensus       132 ------~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G-----~~~~~v~~~~~~~~~~-------------iD~d~le~  187 (483)
T 1rv3_A          132 ------EPHGRIMGLDLPDGGHLTHGFMTDKKKISATS-----IFFESMAYKVNPDTGY-------------IDYDRLEE  187 (483)
T ss_dssp             ------CTTCEEEEECGGGTCCGGGCCBCSSCBCSHHH-----HHSEEEEECBCTTTCS-------------BCHHHHHH
T ss_pred             ------CCCCEEEEecCccCcCcchhhhhcccCccccc-----ceEEEEECccccCCCc-------------CCHHHHHH
Confidence                  34578999988876653111100000000000     000111110   1111             12578888


Q ss_pred             HHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhc--hh
Q 010250          263 LILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVS--FA  339 (514)
Q Consensus       263 li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~--~s  339 (514)
                      ++.+.   ++.+|++ ...+.+ .+.+    +++|+++|++||++||+||+|. |+-..|.. . ...+ ..|+++  ++
T Consensus       188 ~i~~~---~tklIi~-~~sn~~-~~~d----l~~i~~ia~~~g~~livD~ah~~g~~~~~~~-~-~p~~-~~div~~s~~  255 (483)
T 1rv3_A          188 NARLF---HPKLIIA-GTSCYS-RNLD----YGRLRKIADENGAYLMADMAHISGLVVAGVV-P-SPFE-HCHVVTTTTH  255 (483)
T ss_dssp             HHHHH---CCSEEEE-CCSSCC-SCCC----HHHHHHHHHHTTCEEEEECTTTHHHHHHTSS-C-CGGG-TCSEEEEESS
T ss_pred             HHhhc---CCcEEEE-eCCcCC-CcCC----HHHHHHHHHHcCCEEEEEccchhcccccCCC-C-CCCC-CCcEEEecCc
Confidence            88643   3456667 444444 4444    9999999999999999999986 33222211 0 0011 357775  45


Q ss_pred             hhhcCCcccceeEEeCHH---------------HHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHH
Q 010250          340 KALSSAYMPIGAILVSPE---------------VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIV  401 (514)
Q Consensus       340 K~l~gG~~pig~v~~~~~---------------i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~  401 (514)
                      |+|+|  ++.|+++++++               +.+.+...      ...+...+.+....++..++++.+.+   +++.
T Consensus       256 K~l~G--prgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~------~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~  327 (483)
T 1rv3_A          256 KTLRG--CRAGMIFYRRGVRSVDPKTGKEILYNLESLINSA------VFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQ  327 (483)
T ss_dssp             GGGCC--CSCEEEEEECSBCC-------CCBCCHHHHHHHH------HTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHH
T ss_pred             ccCCC--CCceEEEEcchhhhhccccCcchhhHHHHHhhhh------cCCcccCCccHHHHHHHHHHHHHHhChhHHHHH
Confidence            99976  57799998874               33333321      01111112233444444566766543   3567


Q ss_pred             HHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE----ee----
Q 010250          402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR----VS----  472 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~----~~----  472 (514)
                      +++.++.+++.+.|+++ +..++..  +. ..+..+++.....          ....+.+.|.+.||.+.    |+    
T Consensus       328 ~~~~~~~~~l~~~L~~~-g~~~~~~--~~~~~~~~v~~~~~g~----------~~~~~~~~L~~~gI~v~~~~~pg~~~~  394 (483)
T 1rv3_A          328 RQVVANCRALSAALVEL-GYKIVTG--GSDNHLILVDLRSKGT----------DGGRAEKVLEACSIACNKNTCPGDKSA  394 (483)
T ss_dssp             HHHHHHHHHHHHHHHHT-TCEEGGG--SCSSSEEEEEGGGGTC----------CHHHHHHHHHHTTEECEEECCSSCSCT
T ss_pred             HHHHHHHHHHHHHHHhc-CCEeccC--CCCCceEEEeccCCCC----------CHHHHHHHHHhCCcEEecCCCCCCCcC
Confidence            78888999999999875 3322221  11 1344555543210          14457778889999988    53    


Q ss_pred             --CCEEEEeCCCCCC----HHHHHHHHHHHHHHHHH
Q 010250          473 --GDNIMMSPPFIMS----PEEVDELISKYGKALKA  502 (514)
Q Consensus       473 --g~~iRi~p~~~~t----~e~id~~~~~l~~~l~~  502 (514)
                        .+.|||+.+...|    ++|+++++++|.++++.
T Consensus       395 ~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~  430 (483)
T 1rv3_A          395 LRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL  430 (483)
T ss_dssp             TSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence              2479999886556    99999999999988865

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.70  E-value=2.2e-16  Score=163.57  Aligned_cols=234  Identities=15%  Similarity=0.134  Sum_probs=147.4

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP  218 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~  218 (514)
                      ..+...+|+++|+++++   .+.+++++||++|+..+++.+.        ..++.||+.++.|++.....   +...|..
T Consensus        80 ~~p~~~~le~~lA~l~g---~~~~v~~~sG~~Ai~~al~al~--------~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~  148 (430)
T 3ri6_A           80 SNPTVEDLEQRLKNLTG---ALGVLALGSGMAAISTAILTLA--------RAGDSVVTTDRLFGHTLSLFQKTLPSFGIE  148 (430)
T ss_dssp             CCHHHHHHHHHHHHHHT---CSEEEEESCHHHHHHHHHHHHC--------CTTCEEEEETTCCHHHHHHHHTHHHHTTCE
T ss_pred             CCHHHHHHHHHHHHHHC---CCcEEEECCHHHHHHHHHHHHh--------CCCCEEEEcCCCchhHHHHHHHHHHHcCCE
Confidence            45667889999999873   4568899999999999998763        34578999999998754211   1111211


Q ss_pred             cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ  298 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~  298 (514)
                                  +..++..                  +++++++.+.    +++++|++|.+++++|.+.+    +++|.
T Consensus       149 ------------~~~v~~~------------------d~~~l~~ai~----~~t~~v~~e~p~NptG~~~d----l~~i~  190 (430)
T 3ri6_A          149 ------------VRFVDVM------------------DSLAVEHACD----ETTKLLFLETISNPQLQVAD----LEALS  190 (430)
T ss_dssp             ------------EEEECTT------------------CHHHHHHHCC----TTEEEEEEESSCTTTCCCCC----HHHHH
T ss_pred             ------------EEEeCCC------------------CHHHHHHhhC----CCCeEEEEECCCCCCCeecC----HHHHH
Confidence                        1111110                  1466766664    46889999999999998887    99999


Q ss_pred             HHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEe--CH-HH-----------------
Q 010250          299 AVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILV--SP-EV-----------------  358 (514)
Q Consensus       299 ~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~--~~-~i-----------------  358 (514)
                      ++|++||+++|+||+++ .+.   ......+|.+..+.+++|.++|+...+|++++  .+ .+                 
T Consensus       191 ~la~~~g~~livD~a~~-~~~---~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~  266 (430)
T 3ri6_A          191 KVVHAKGIPLVVDTTMT-PPY---LLEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMA  266 (430)
T ss_dssp             HHHHTTTCCEEEECTTS-CTT---TCCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGH
T ss_pred             HHHHHcCCEEEEECCCc-ccc---cCChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhh
Confidence            99999999999999997 222   22222344432333577999985345565554  22 11                 


Q ss_pred             -HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEE---------
Q 010250          359 -SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR---------  428 (514)
Q Consensus       359 -~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~---------  428 (514)
                       ++.+..      ..........+|+.+..++..++.+..  ..++..++...+.+.|++.   |.+..|.         
T Consensus       267 ~i~~~~~------~~~~~~g~~~~~~~a~l~l~~l~~l~~--r~~~~~~na~~la~~L~~~---p~v~~V~~P~l~~~p~  335 (430)
T 3ri6_A          267 FLYKARK------EVFQNLGPSLSPHNAYLQSLGLETMAL--RIERSCQNAQELAHWLLSI---PQVKCVNHPSLPDSPF  335 (430)
T ss_dssp             HHHHHHH------THHHHHCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHTTC---TTCEEEECTTSTTSTT
T ss_pred             HHHHHHH------HHHHhcCCCCCHHHHHHHHhhhhhHHH--HHHHHHHHHHHHHHHHhCC---CCccEEECCCCCCCcc
Confidence             122111      001111223467777777777766542  3455666777777777654   4444443         


Q ss_pred             --------eeee-eEEEEEc
Q 010250          429 --------GTGL-ILGTEFA  439 (514)
Q Consensus       429 --------g~g~-~~~i~~~  439 (514)
                              |.|. +++|++.
T Consensus       336 ~~~~~~~~g~Gg~~lsf~l~  355 (430)
T 3ri6_A          336 YAIAKRQFRYAGSILTFELE  355 (430)
T ss_dssp             HHHHHHHCSSCCSEEEEECS
T ss_pred             HHHHHHhCCCCceEEEEEEC
Confidence                    4466 9999986

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=99.69  E-value=1.9e-15  Score=159.22  Aligned_cols=345  Identities=11%  Similarity=0.009  Sum_probs=190.7

Q ss_pred             CHH-HHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCC---------CeEEEeCChhHHHHHHHHHHHHHHh
Q 010250          118 EPR-LVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKM---------AKVFFTNSGSEANDTQVKLVWYYNN  187 (514)
Q Consensus       118 ~p~-v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~---------~~v~~~~sGseA~~~Alk~a~~~~~  187 (514)
                      .|. +.+.+...++.............+...++.++++++++....         ...+|++|||+||..|+.+++....
T Consensus        91 ~~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~  170 (481)
T 4e1o_A           91 WPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKI  170 (481)
T ss_dssp             HHHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHH
Confidence            344 445555566543322111111223344455566666632211         2679999999999999999875422


Q ss_pred             hc----CCC------CccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          188 AL----GRP------NKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       188 ~~----~~~------~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      ..    +..      ..+.+|+.+...|.+...+....+...            ..+++...++             .++
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~------------~~v~~~~~~~-------------~d~  225 (481)
T 4e1o_A          171 LEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKM------------KFLPVDDNFS-------------LRG  225 (481)
T ss_dssp             HHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEE------------EEECCCTTSC-------------CCH
T ss_pred             HHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCce------------EEEEcCCCCc-------------CCH
Confidence            10    100      023456666667766544443333221            1122211111             125


Q ss_pred             HHHHHHHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC-CCc
Q 010250          258 NNLEDLILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPD  334 (514)
Q Consensus       258 ~~le~li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv-~pD  334 (514)
                      ++|++.+.+..  ...+.+|++....+..|.+.|    |++|.++|++||+++++|++|.|....+..+.....|+ ..|
T Consensus       226 ~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~----l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aD  301 (481)
T 4e1o_A          226 EALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDC----LSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYAD  301 (481)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCS
T ss_pred             HHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCC----HHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCC
Confidence            88888886431  122455666666667788876    99999999999999999999986433322222222344 357


Q ss_pred             hhch--hhhhcCCcccceeEEeCHH-HHH-HhhhccCCCCc-----------ccccCCCCCcHHHHHHHHHHHHHHhhcc
Q 010250          335 LVSF--AKALSSAYMPIGAILVSPE-VSE-VIHSQSNTLGS-----------FSHGFTYSGHPVSCAVAIEALKIYKERN  399 (514)
Q Consensus       335 iv~~--sK~l~gG~~pig~v~~~~~-i~~-~l~~~~~~~~~-----------~~~~~t~~~~pl~~aaa~aal~~~~~~~  399 (514)
                      .+++  .|.+++. ...|++++++. ... .+.........           +....+.....+.+.+++.++..-.-++
T Consensus       302 si~~~~hK~l~~p-~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~  380 (481)
T 4e1o_A          302 SFTFNPSKWMMVH-FDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQA  380 (481)
T ss_dssp             EEEECHHHHSSCC-SSCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEChHHhcCCC-CceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHH
Confidence            7765  5998876 56788877654 322 22110000000           0000111122444444444432211245


Q ss_pred             HHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcE-EEe---eC-C
Q 010250          400 IVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGML-VRV---SG-D  474 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~-~~~---~g-~  474 (514)
                      +.++..++.+++++.|+++....+...  ....++.+.+....          .....+.+.|.++|.+ +.+   .| .
T Consensus       381 ~~~~~~~~a~~l~~~L~~~~g~~~~~~--~~~~~v~f~~~~~~----------~~~~~l~~~L~~~g~~~~~~~~~~g~~  448 (481)
T 4e1o_A          381 HVRHGTEMAKYFESLVRNDPSFEIPAK--RHLGLVVFRLKGPN----------SLTENVLKEIAKAGRLFLIPATIQDKL  448 (481)
T ss_dssp             HHHHHHHHHHHHHHHHHTCTTEECCSC--CCSSEEEEEESSCH----------HHHHHHHHHHHHHCSSBCEEEEETTEE
T ss_pred             HHHHHHHHHHHHHHHHhcCCCeEEecC--CceeEEEEEeCCch----------HHHHHHHHHHHhCCeEEEEeeEECCEE
Confidence            677888899999999987633222211  12345556553211          1345688888888844 333   23 3


Q ss_pred             EEEEeCCC-CCCHHHHHHHHHHHHHHHHHHH
Q 010250          475 NIMMSPPF-IMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       475 ~iRi~p~~-~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      .+|++... ..|++||++++++|+++++++.
T Consensus       449 ~lR~~~~~~~tt~~di~~~~~~i~~~~~~l~  479 (481)
T 4e1o_A          449 IIRFTVTSQFTTRDDILRDWNLIRDAATLIL  479 (481)
T ss_dssp             EEEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            59999653 4589999999999999887653

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.69  E-value=1.9e-16  Score=164.05  Aligned_cols=297  Identities=13%  Similarity=-0.011  Sum_probs=172.1

Q ss_pred             CCHHHHHHHHHHHhcCCc--cccccccCCchHHHHHHHHHHhcCcCCCCeEEE---eCChhHHHHHHHHHHHHHHhhcCC
Q 010250          117 SEPRLVAAATAQLNTLPF--YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFF---TNSGSEANDTQVKLVWYYNNALGR  191 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~--~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~---~~sGseA~~~Alk~a~~~~~~~~~  191 (514)
                      ++++|++|+.++......  ....+..+.....+++++++++++   .+...+   ++||++|++.+++...        
T Consensus        36 n~~~vl~A~~~~~~~~~~~~~~~g~~y~~~~~~~l~~~la~~~g---~~~~~~~i~~~sGt~Ai~~al~al~--------  104 (431)
T 3ht4_A           36 NQFRVLESFGKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFG---AEAGLVRPQIISGTHAISTALFGIL--------  104 (431)
T ss_dssp             HHHHHHHHHHHTTCCGGGSCCCCTTCCSCHHHHHHHHHHHHHTT---CSEECCBTTSCSHHHHHHHHHHTTC--------
T ss_pred             HHHHHHHHHHHhchhhhhcCCCCCCCCChhhHHHHHHHHHHHhC---CCcccccceeeCHHHHHHHHHHHhC--------
Confidence            567888888775321111  111222334556789999999874   334443   5699999999997542        


Q ss_pred             CCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCc
Q 010250          192 PNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPET  271 (514)
Q Consensus       192 ~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~  271 (514)
                      ..+++||+.++..|+.+...+.+++.  ++..+......+..++....+.             .++++|++.+.    ++
T Consensus       105 ~~Gd~Vl~~~~~~y~~~~~~~~l~g~--~~~~~~~~G~~~~~v~~~~~~~-------------~d~e~l~~~l~----~~  165 (431)
T 3ht4_A          105 RPGDELLYITGKPYDTLEEIVGVRGK--GVGSFKEYNIGYNAVPLTEGGL-------------VDFEAVAAAIH----SN  165 (431)
T ss_dssp             CTTCEEEECSSSCCTTHHHHTTSSSC--SSSCSGGGTCEEEECCBCTTSS-------------BCHHHHHHHCC----TT
T ss_pred             CCCCEEEEeCCCCchhHHHHHhhccc--ccchHHHcCCEEEEeCCCCCCC-------------cCHHHHHhhcC----CC
Confidence            33467888874555555444443332  1111110001111222211111             12567777664    46


Q ss_pred             EEEEEEcc-ccCCCCcccCChhHHHHHHHHHHh--cCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCc
Q 010250          272 IAAFIAEP-VIGAGGVIPPPATYFEKVQAVVKK--YDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAY  346 (514)
Q Consensus       272 ~aavivEp-v~~~~G~~~p~~~~L~~l~~l~~~--~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~  346 (514)
                      +++|++++ .++.+|. ..+...+++|.++|++  ||+++|+||+|+++...+...   .++  .|++  +++|.++||+
T Consensus       166 tk~V~i~~sp~np~~~-~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~---~~g--~Di~~~S~sK~lgg~~  239 (431)
T 3ht4_A          166 TKMIGIQRSKGYATRP-SFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC---HVG--ADLMAGSLIKNPGGGI  239 (431)
T ss_dssp             EEEEEEECSCTTSSSC-CCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG---GTT--CSEEEEETTSGGGTTT
T ss_pred             CeEEEEECCCCCCCCC-cCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc---ccC--CeEEEcCccccCCCCC
Confidence            88999996 3334333 3355669999999999  999999999998764433322   123  4655  6889999853


Q ss_pred             -ccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-C-CCc
Q 010250          347 -MPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-D-SPI  423 (514)
Q Consensus       347 -~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-~-~~~  423 (514)
                       .+.|++++++++++.+......   ...+.+.+.++..+.+++..++.+  +...++..+++.++.+.|+++. . .|.
T Consensus       240 ~~~GG~v~~~~~li~~l~~~~~~---~~~g~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~a~~l~~~L~~~g~~v~p~  314 (431)
T 3ht4_A          240 VKTGGYIVGKEQYVEACAYRLTS---PGIGAEAGASLYSLQEMYQGFFLA--PHVAGQALKGAIFTAAFLEKLGMNTSPA  314 (431)
T ss_dssp             CSSCEEEEECHHHHHHHHHHHSC---TTTTTSCSCCCSCSHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCCEESC
T ss_pred             CCceEEEEecHHHHHHHHHHhcc---CCcccccCccHHHHHHHHhHhhhH--HHHHHHHHHHHHHHHHHHHhCcCEecCC
Confidence             4567888999998888642111   112223333222233344555544  3456778888888988888762 1 111


Q ss_pred             eeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250          424 IGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG  466 (514)
Q Consensus       424 ~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G  466 (514)
                       ...++.++++.+.+.+..           ....+++.|++..
T Consensus       315 -~~~~~~~li~~i~l~~~~-----------~~~~~~~~l~~~~  345 (431)
T 3ht4_A          315 -WNAPRTDLIQSVQFDDKD-----------RMIAFCQAIQYAS  345 (431)
T ss_dssp             -TTSCCSSSCCEEECCCHH-----------HHHHHHHHHHHTS
T ss_pred             -CCCCCccEEEEEEeCCHH-----------HHHHHHHHHHhcC
Confidence             123445667888875321           3556788888764

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.68  E-value=1.1e-15  Score=160.30  Aligned_cols=321  Identities=14%  Similarity=0.098  Sum_probs=175.4

Q ss_pred             CCHHHHHHHHHHHhc-CCcc---ccccccC--CchHH-HHHHHHHHhcCcCCCC---eEEEeCChhHHHHHHHHHHHHHH
Q 010250          117 SEPRLVAAATAQLNT-LPFY---HSFWNRT--TKPSL-DLAKELLEMFTASKMA---KVFFTNSGSEANDTQVKLVWYYN  186 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~-~~~~---~~~~~~~--~~~~~-ela~~L~~~~~~~~~~---~v~~~~sGseA~~~Alk~a~~~~  186 (514)
                      .+|+|++|+...+.+ ...+   ..++++.  .+..+ ...++++++++. ..+   ..++++||++||..++....   
T Consensus        66 ~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~-~~~~~~~~v~~~sGt~An~~al~al~---  141 (490)
T 2a7v_A           66 CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDL-DPAQWGVNVQPYSGSPANLAVYTALL---  141 (490)
T ss_dssp             CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTC-CTTTEEEECCCSSHHHHHHHHHHHHC---
T ss_pred             CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCC-CcccCceEEeCCchHHHHHHHHHHHc---
Confidence            489999999988743 3222   1222322  11222 223788888843 222   24567799999999998663   


Q ss_pred             hhcCCCCccEEEEEecCCcccce-e------eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250          187 NALGRPNKKKFIARQKSYHGSTL-I------AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN  259 (514)
Q Consensus       187 ~~~~~~~~~~ii~~~~~yHG~t~-~------~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (514)
                           ..+++||+.+..|.|... +      .+..++..     +.       .++++.    +  .    +....++++
T Consensus       142 -----~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~-----~~-------~~~~~v----d--~----~~~~iD~d~  194 (490)
T 2a7v_A          142 -----QPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIF-----FE-------SMPYKL----N--P----KTGLIDYNQ  194 (490)
T ss_dssp             -----CSCEECCC-------------------------------------------CCB----C--T----TTCSBCHHH
T ss_pred             -----CCCCEecccCccccccccchhhhcchhHHHcCCe-----EE-------EEeccc----c--c----ccCCcCHHH
Confidence                 335678887776644311 1      11222210     00       000000    0  0    001123688


Q ss_pred             HHHHHHHhCCCcEEEEEE-ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhc
Q 010250          260 LEDLILKEGPETIAAFIA-EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVS  337 (514)
Q Consensus       260 le~li~~~~~~~~aaviv-Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~  337 (514)
                      |++++....+   .+|++ .|.++   ...+    +++|+++|++||++|++|++|. |+...|.. . ..+. ..|+++
T Consensus       195 le~~l~~~~~---klIi~~~s~~~---~~~d----l~~i~~ia~~~g~~livD~Ah~~glv~~g~~-~-~~~~-~aDiv~  261 (490)
T 2a7v_A          195 LALTARLFRP---RLIIAGTSAYA---RLID----YARMREVCDEVKAHLLADMAHISGLVAAKVI-P-SPFK-HADIVT  261 (490)
T ss_dssp             HHHHHHHHCC---SEEEECCSSCC---SCCC----HHHHHHHHHHTTCEEEEECGGGHHHHHTTSS-C-CGGG-TCSEEE
T ss_pred             HHHHHhhcCC---cEEEEcCCCCC---Cccc----HHHHHHHHHHcCCEEEEccccccccccCCcC-C-CCCC-CCCEEE
Confidence            8888865432   34555 34443   2333    9999999999999999999986 33222211 1 1111 247764


Q ss_pred             --hhhhhcCCcccceeEEeCHH---------------HHHHhhhccCCCCcccccCCCCC-cHHHHHHHHHHHHHHhh--
Q 010250          338 --FAKALSSAYMPIGAILVSPE---------------VSEVIHSQSNTLGSFSHGFTYSG-HPVSCAVAIEALKIYKE--  397 (514)
Q Consensus       338 --~sK~l~gG~~pig~v~~~~~---------------i~~~l~~~~~~~~~~~~~~t~~~-~pl~~aaa~aal~~~~~--  397 (514)
                        ++|+|+|  .+.|+++++++               +.+.+...       ...++.++ ++...++..++++.+.+  
T Consensus       262 ~S~hK~l~G--p~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~-------~~~g~qggp~~~~iaAla~Al~~~~~~~  332 (490)
T 2a7v_A          262 TTTHKTLRG--ARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFA-------VFPSLQGGPHNHAIAAVAVALKQACTPM  332 (490)
T ss_dssp             EESSGGGCS--CSCEEEEEECSEEEEETTTEEEEECCCHHHHHHH-------HTTTTCCSCCHHHHHHHHHHHHHHHSHH
T ss_pred             ECCcccCcc--ccchheeeccchhcccccccchhhHHHHHHHHHH-------hcccCCCCchHHHHHHHHHHHHHHhhhh
Confidence              6799976  46688888764               34444421       11122222 34444444456665532  


Q ss_pred             -ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----
Q 010250          398 -RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----  472 (514)
Q Consensus       398 -~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----  472 (514)
                       ++..+++.++.++|++.|++. ...++.. .....++.+++.+...          .+..+.+.|.+.||.+...    
T Consensus       333 ~~~~~~~~~~na~~L~~~L~~~-G~~v~~~-~t~t~lv~vdl~~~g~----------~~~~~~~~L~~~GI~v~~~~~p~  400 (490)
T 2a7v_A          333 FREYSLQVLKNARAMADALLER-GYSLVSG-GTDNHLVLVDLRPKGL----------DGARAERVLELVSITANKNTCPG  400 (490)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHT-TCEEGGG-SCSSSEEEEECTTTTC----------CHHHHHHHHHHTTEECEEECCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHc-CcEEecC-CCCCeEEEEEeCCCCC----------CHHHHHHHHHhCCeEEecCccCC
Confidence             356788889999999999875 3222210 0112455666643211          1455778888999998732    


Q ss_pred             ------CCEEEEeCCC----CCCHHHHHHHHHHHHHHHHH
Q 010250          473 ------GDNIMMSPPF----IMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       473 ------g~~iRi~p~~----~~t~e~id~~~~~l~~~l~~  502 (514)
                            ...||+..|.    .++++|++++++.|.+++..
T Consensus       401 d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~  440 (490)
T 2a7v_A          401 DRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNI  440 (490)
T ss_dssp             CCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHHh
Confidence                  2569996543    57899999999999988863

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.67  E-value=1e-15  Score=157.96  Aligned_cols=285  Identities=13%  Similarity=0.127  Sum_probs=171.7

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceee---eecCCCc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIA---ASLSGLP  218 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~---~~~s~~~  218 (514)
                      ..+...+++++|+++++   .+.+++++||++|+..+++...        ..+++||+.++.|++.....   +...|..
T Consensus        80 ~~p~~~~le~~lA~l~g---~~~~i~~ssGt~Ai~~al~~l~--------~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~  148 (415)
T 2fq6_A           80 GTLTHFSLQQAMCELEG---GAGCVLFPCGAAAVANSILAFI--------EQGDHVLMTNTAYEPSQDFCSKILSKLGVT  148 (415)
T ss_dssp             CCHHHHHHHHHHHHHHT---CSEEEEESSHHHHHHHHHHTTC--------CTTCEEEEETTSCHHHHHHHHHTGGGGTCE
T ss_pred             CCchHHHHHHHHHHHhC---CCeEEEeCCHHHHHHHHHHHHh--------CCCCEEEEeCCCchHHHHHHHHHHHHcCcE
Confidence            44667889999999874   3567888999999999987542        23468999998888753111   1111111


Q ss_pred             cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ  298 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~  298 (514)
                                  +..++..                  +++++++++.    +++++|++|.++++.|.+.+    +++|.
T Consensus       149 ------------v~~v~~~------------------d~~~le~ai~----~~tklV~~e~~~NptG~v~d----l~~I~  190 (415)
T 2fq6_A          149 ------------TSWFDPL------------------IGADIVKHLQ----PNTKIVFLESPGSITMEVHD----VPAIV  190 (415)
T ss_dssp             ------------EEEECTT------------------CGGGGGGGCC----TTEEEEEEESSCTTTCCCCC----HHHHH
T ss_pred             ------------EEEECCC------------------CHHHHHHhhc----cCCcEEEEECCCCCCCEeec----HHHHH
Confidence                        0111110                  1355665553    35789999999999999987    99999


Q ss_pred             HHHHh--cCCEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcc-cceeEEeCHHHHHHhhhccCCCCccc
Q 010250          299 AVVKK--YDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYM-PIGAILVSPEVSEVIHSQSNTLGSFS  373 (514)
Q Consensus       299 ~l~~~--~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~-pig~v~~~~~i~~~l~~~~~~~~~~~  373 (514)
                      ++|++  ||+++|+|++|+. +..+...     ....|++  +++|.+++++. .+|++++++++++.+....     ..
T Consensus       191 ~la~~~~~g~~livD~a~a~-~~~~~p~-----~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~~~-----~~  259 (415)
T 2fq6_A          191 AAVRSVVPDAIIMIDNTWAA-GVLFKAL-----DFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRENA-----YL  259 (415)
T ss_dssp             HHHHHHCTTCEEEEECTTTT-TTSSCGG-----GGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHHH-----HH
T ss_pred             HHHHhhcCCCEEEEECCCcc-cccCCcc-----ccCCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHHHH-----Hh
Confidence            99999  9999999999972 2222111     2346877  56799988533 3688888888877776321     11


Q ss_pred             ccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEE
Q 010250          374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEF  438 (514)
Q Consensus       374 ~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~  438 (514)
                      .|  ...+|..+..++.+++.+..  ..++..++...+.+.|++..     .+|...          ..++.|.++.|.+
T Consensus       260 ~G--~~~~~~~a~~~~~~l~~l~~--r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l  335 (415)
T 2fq6_A          260 MG--QMVDADTAYITSRGLRTLGV--RLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVL  335 (415)
T ss_dssp             TT--CCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEE
T ss_pred             cC--CCCCHHHHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEE
Confidence            12  23457766666666665532  23444455555555554431     012110          0124678889988


Q ss_pred             ccCCCCCCCCCCccchHHHHHHHHHHCCc----------EEE----------------eeCCEEEEeCCCCCCHHHHHHH
Q 010250          439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGM----------LVR----------------VSGDNIMMSPPFIMSPEEVDEL  492 (514)
Q Consensus       439 ~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv----------~~~----------------~~g~~iRi~p~~~~t~e~id~~  492 (514)
                      ......        .....+...+.-.++          ...                ..++.|||+..+..++++|+.+
T Consensus       336 ~g~~~~--------~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l  407 (415)
T 2fq6_A          336 KKKLNN--------EELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADL  407 (415)
T ss_dssp             SSCCCH--------HHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHH
T ss_pred             CCCCCH--------HHHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHH
Confidence            642000        001112222111110          000                0135799999998898888888


Q ss_pred             HHHHHH
Q 010250          493 ISKYGK  498 (514)
Q Consensus       493 ~~~l~~  498 (514)
                      .++|++
T Consensus       408 ~~al~~  413 (415)
T 2fq6_A          408 DAGFAR  413 (415)
T ss_dssp             HHHHHT
T ss_pred             HHHHHh
Confidence            887764

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.67  E-value=2.4e-16  Score=159.52  Aligned_cols=328  Identities=12%  Similarity=0.065  Sum_probs=192.1

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc-------cccccccCCchHHHHHHHHHHhcCcCCCC-eE-EEeC
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-------YHSFWNRTTKPSLDLAKELLEMFTASKMA-KV-FFTN  169 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~-------~~~~~~~~~~~~~ela~~L~~~~~~~~~~-~v-~~~~  169 (514)
                      ++.|+|..+.      ...+|+|++|+.+.+.+...       ....+....+...+++++++++++. ..+ ++ ++++
T Consensus         3 ~~~~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~-~~~~~~i~~t~   75 (362)
T 2c0r_A            3 ERAYNFNAGP------AALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGN-PTGYKVLFIQG   75 (362)
T ss_dssp             CCCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTC-CSSEEEEEESS
T ss_pred             cceeeccCCC------CCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCC-CCCcEEEEECC
Confidence            4567765432      23689999999998754210       0000111223456788888888743 232 54 6779


Q ss_pred             ChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccce-eeeecCCCccccCCCCCCCCcccccCCC--CcccCCCCC
Q 010250          170 SGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTL-IAASLSGLPALHQKFDLPAPFVLHTDCP--HYWRYAHPG  246 (514)
Q Consensus       170 sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  246 (514)
                      ||++|+..+++...        ..+++||+.+..+++... ......|....             ++.+  ..+... + 
T Consensus        76 g~t~a~~~~~~~l~--------~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~-------------v~~~~~~~~~~~-~-  132 (362)
T 2c0r_A           76 GASTQFAMIPMNFL--------KEGQTANYVMTGSWASKALKEAKLIGDTHV-------------AASSEASNYMTL-P-  132 (362)
T ss_dssp             HHHHHHHHHHHHHC--------CTTCEEEEEECSHHHHHHHHHHHHHSCEEE-------------EEECGGGTTCSC-C-
T ss_pred             CchHHHHHHHHhcC--------CCCCeEEEEecCcHhHHHHHHHHHhCCeEE-------------EecccccccccC-C-
Confidence            99999999998663        234678877766555321 11111121110             0100  000000 0 


Q ss_pred             CChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccccee
Q 010250          247 ETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGC  326 (514)
Q Consensus       247 ~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~  326 (514)
                       +        .++++  +   . +++.+|++.+.++.+|.+.++   +++|      ||+++|+||+|. +|..  ..  
T Consensus       133 -~--------~~~~~--i---~-~~t~~v~~~~~~n~tG~~~~~---l~~i------~~~~vivD~a~~-~~~~--~~--  183 (362)
T 2c0r_A          133 -K--------LQEIQ--L---Q-DNAAYLHLTSNETIEGAQFKA---FPDT------GSVPLIGDMSSD-ILSR--PF--  183 (362)
T ss_dssp             -C--------GGGCC--C---C-TTEEEEEEESEETTTTEECSS---CCCC------TTSCEEEECTTT-TTSS--CC--
T ss_pred             -C--------HHHcc--c---C-CCcCEEEEeCCcCccceeccc---cccc------CCCEEEEEChhh-ccCC--cc--
Confidence             0        11111  1   2 356777777667888885332   5555      899999999997 4322  11  


Q ss_pred             cccCCCCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcc------cc-cCCCCCcHHHHHHHHHHHHHHhh
Q 010250          327 DKYSIKPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF------SH-GFTYSGHPVSCAVAIEALKIYKE  397 (514)
Q Consensus       327 ~~~gv~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~------~~-~~t~~~~pl~~aaa~aal~~~~~  397 (514)
                      +....  |++  +++|.++.  ..+|++++++++++.+.....  ..+      .. ...++.++.+++++.++|+.+.+
T Consensus       184 ~~~~~--d~~~~s~~K~~g~--~G~G~l~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~  257 (362)
T 2c0r_A          184 DLNQF--GLVYAGAQKNLGP--SGVTVVIVREDLVAESPKHLP--TMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEE  257 (362)
T ss_dssp             CGGGC--SEEEEETTTTTCC--SSCEEEEEEGGGSSSCCTTSC--GGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHH
T ss_pred             chhHC--cEEEEeccccccC--cCcEEEEEcHHHHhhccccCc--hHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHH
Confidence            11112  665  56799863  338999999988766642100  000      01 12345667788888889987654


Q ss_pred             ----ccHHHHHHHHHHHHHhhhhhccCC-CceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe
Q 010250          398 ----RNIVEQVNKIAPKFQDGVKAFSDS-PIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV  471 (514)
Q Consensus       398 ----~~~~~~~~~~~~~l~~~L~~l~~~-~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~  471 (514)
                          +...++.+++++++.+.|+++... ...... ...+.++.+.+.+.           .....+.+.|.++||.+.+
T Consensus       258 ~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~L~~~gi~~~~  326 (362)
T 2c0r_A          258 RGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLASE-----------ELEKEFVKASEQEGFVGLK  326 (362)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSCH-----------HHHHHHHHHHHHTTEESCB
T ss_pred             hCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCCc-----------chHHHHHHHHHHCCCeecc
Confidence                346778888888999988876211 111100 11233445554321           0245688889999998765


Q ss_pred             e---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          472 S---GDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       472 ~---g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +   .+.||++....+|+||++++++.|++.+++
T Consensus       327 g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~~~  360 (362)
T 2c0r_A          327 GHRSVGGLRASIYNAVPYESCEALVQFMEHFKRS  360 (362)
T ss_dssp             CCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence            3   246999987778999999999999988754

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=99.66  E-value=1.3e-14  Score=152.95  Aligned_cols=344  Identities=10%  Similarity=-0.002  Sum_probs=182.3

Q ss_pred             HHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC--------CCeEEEeCChhHHHHHHHHHHHHHHhhc-CC
Q 010250          121 LVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK--------MAKVFFTNSGSEANDTQVKLVWYYNNAL-GR  191 (514)
Q Consensus       121 v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~--------~~~v~~~~sGseA~~~Alk~a~~~~~~~-~~  191 (514)
                      +.+++...++.....+...........+++++++++++...        ...++|++|||||+..|+..++...... +.
T Consensus        90 ~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~  169 (486)
T 1js3_A           90 LADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQA  169 (486)
T ss_dssp             HHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhc
Confidence            55666666654322211111122333345566677764321        2468999999999999998886431110 00


Q ss_pred             C-C--------ccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHH
Q 010250          192 P-N--------KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLED  262 (514)
Q Consensus       192 ~-~--------~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~  262 (514)
                      . +        .+.+|+.....|.+...+....|...            ..+++...++             .++++|++
T Consensus       170 ~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v------------~~v~~d~~~~-------------~d~~~L~~  224 (486)
T 1js3_A          170 ASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKL------------KAIPSDGKFA-------------MRASALQE  224 (486)
T ss_dssp             HSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEE------------EEECCCTTSC-------------CCHHHHHH
T ss_pred             cCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCce------------EEeecCCCCC-------------CCHHHHHH
Confidence            0 1        12234444444444333322222211            1122211111             11578888


Q ss_pred             HHHHhC--CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC-CCchhc--
Q 010250          263 LILKEG--PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLVS--  337 (514)
Q Consensus       263 li~~~~--~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv-~pDiv~--  337 (514)
                      .+.+..  ...+.+|++....+..|.+.|    +++|.++|++||+++++|++|.++-.....+.....++ ..|.++  
T Consensus       225 ~i~~~~~~g~~p~~vv~~~~~n~tG~~~~----l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~  300 (486)
T 1js3_A          225 ALERDKAAGLIPFFVVATLGTTSCCSFDN----LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFN  300 (486)
T ss_dssp             HHHHHHHTTCEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEEC
T ss_pred             HHHHHHhCCCCceEEEEeCCCCCCCCCCC----HHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEc
Confidence            886432  112335555545566787766    99999999999999999999986432221111111232 357665  


Q ss_pred             hhhhhcCCcccceeEEeCHH-H-HHHhhhccCCCCc----------ccc---cCCCCCcHHHHHHHHHHHHHHhhccHHH
Q 010250          338 FAKALSSAYMPIGAILVSPE-V-SEVIHSQSNTLGS----------FSH---GFTYSGHPVSCAVAIEALKIYKERNIVE  402 (514)
Q Consensus       338 ~sK~l~gG~~pig~v~~~~~-i-~~~l~~~~~~~~~----------~~~---~~t~~~~pl~~aaa~aal~~~~~~~~~~  402 (514)
                      .+|.++.+ +.+|+++++++ . .+.+.........          +..   ..+.....+++.+++..+..-.-+++.+
T Consensus       301 ~hK~~~~p-~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~  379 (486)
T 1js3_A          301 PHKWLLVN-FDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIR  379 (486)
T ss_dssp             HHHHSSCC-SSCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhhcCCC-cceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHH
Confidence            46988776 68899998654 2 4444211000000          000   0011122344444444332111134567


Q ss_pred             HHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----C-CEEE
Q 010250          403 QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----G-DNIM  477 (514)
Q Consensus       403 ~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----g-~~iR  477 (514)
                      +..++.+++.+.|+++....++.  ...+.++.+.+....          .....+.+.|.++|+++...    + ..+|
T Consensus       380 ~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~v~f~~~~~~----------~~~~~l~~~L~~~g~~~~~~~~~~~~~~lR  447 (486)
T 1js3_A          380 KHVQLSHEFEAFVLQDPRFEVCA--EVTLGLVCFRLKGSD----------GLNEALLERINSARKIHLVPCRLRGQFVLR  447 (486)
T ss_dssp             HHHHHHHHHHHHHHHCTTEEECS--CCCSSEEEEEESSCH----------HHHHHHHHHHHHHTSCBCEEEEETTEEEEE
T ss_pred             HHHHHHHHHHHHHhcCCCeEEeC--CCceeEEEEEecChH----------HHHHHHHHHHHhcCCEEEEEEEECCEEEEE
Confidence            77888888998888752221111  123445555553210          12456788888888654321    2 3699


Q ss_pred             EeC-CCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250          478 MSP-PFIMSPEEVDELISKYGKALKATEER  506 (514)
Q Consensus       478 i~p-~~~~t~e~id~~~~~l~~~l~~~~~~  506 (514)
                      ++. ....|++||++++++|+++++++.++
T Consensus       448 i~~~~~~~t~~di~~~~~~l~~~~~~~~~~  477 (486)
T 1js3_A          448 FAICSRKVESGHVRLAWEHIRGLAAELLAA  477 (486)
T ss_dssp             EECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence            995 34478999999999999998776543

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=99.66  E-value=4.5e-15  Score=155.99  Aligned_cols=317  Identities=12%  Similarity=0.012  Sum_probs=177.0

Q ss_pred             hHHHHHHHHHHhcCcCC--------CCeEEEeCChhHHHHHHHHHHHHHHhhc---CCCC-------ccEEEEEecCCcc
Q 010250          145 PSLDLAKELLEMFTASK--------MAKVFFTNSGSEANDTQVKLVWYYNNAL---GRPN-------KKKFIARQKSYHG  206 (514)
Q Consensus       145 ~~~ela~~L~~~~~~~~--------~~~v~~~~sGseA~~~Alk~a~~~~~~~---~~~~-------~~~ii~~~~~yHG  206 (514)
                      ...++.++++++++...        ....+|++|||+||..|+..++......   ..++       .+.+|+.+...|-
T Consensus       114 lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~  193 (475)
T 3k40_A          114 LEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHS  193 (475)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCH
T ss_pred             HHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchH
Confidence            33445556667663221        1268999999999999999997543211   0011       1345666666776


Q ss_pred             cceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC--CCcEEEEEEccccCCC
Q 010250          207 STLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG--PETIAAFIAEPVIGAG  284 (514)
Q Consensus       207 ~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~--~~~~aavivEpv~~~~  284 (514)
                      +...+....|...            ..+++...             . .++++|++.|.+..  ...+.+|++.-..+..
T Consensus       194 s~~~~~~~~g~~~------------~~v~~d~~-------------~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~  247 (475)
T 3k40_A          194 SVERAGLLGGVKL------------RSVQSENH-------------R-MRGAALEKAIEQDVAEGLIPFYAVVTLGTTNS  247 (475)
T ss_dssp             HHHHHHHHHTCEE------------EEECCBTT-------------B-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTT
T ss_pred             HHHHHHHHcCCce------------EEEECCCC-------------C-cCHHHHHHHHHHHHHCCCccEEEEEEecCCCC
Confidence            6544444333221            11221110             1 22688888886531  1224555555556667


Q ss_pred             CcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC-CCchhch--hhhhcCCcccceeEEeCHH-H-H
Q 010250          285 GVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSF--AKALSSAYMPIGAILVSPE-V-S  359 (514)
Q Consensus       285 G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv-~pDiv~~--sK~l~gG~~pig~v~~~~~-i-~  359 (514)
                      |.+.|    +++|.++|++||+++++|++|.+....+..+.....++ ..|.+++  .|.+++. ..+|++++++. . .
T Consensus       248 G~~~~----l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p-~g~g~l~~~~~~~l~  322 (475)
T 3k40_A          248 CAFDY----LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVN-FDCSAMWLKDPSWVV  322 (475)
T ss_dssp             CCBCC----HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESSGGGC-
T ss_pred             cCcCC----HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCC-CceEEEEEeCHHHHH
Confidence            88876    99999999999999999999975322222111112243 3577765  5988876 57788887653 3 2


Q ss_pred             HHhhhccCCCCccccc-------CCC-CCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEEE
Q 010250          360 EVIHSQSNTLGSFSHG-------FTY-SGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR  428 (514)
Q Consensus       360 ~~l~~~~~~~~~~~~~-------~t~-~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~  428 (514)
                      +.+.....+......+       .+. .+-+.......++|+.+..   +++.++..++.+++++.|+++....++..  
T Consensus       323 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~l~~~--  400 (475)
T 3k40_A          323 NAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAE--  400 (475)
T ss_dssp             --------------------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEESSC--
T ss_pred             HHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecC--
Confidence            2222111000000000       011 1112222333344444433   45677888899999999987633222211  


Q ss_pred             eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE-e---eC-CEEEEeCC-CCCCHHHHHHHHHHHHHHHHH
Q 010250          429 GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-V---SG-DNIMMSPP-FIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       429 g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~-~---~g-~~iRi~p~-~~~t~e~id~~~~~l~~~l~~  502 (514)
                      ....++.+.+....          .....+.+.|.++|.+.. +   .| ..+|++.. ...|++||++++++|++++++
T Consensus       401 ~~~~iv~f~~~~~~----------~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~  470 (475)
T 3k40_A          401 INMGLVCFRLKGSN----------ERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEVSAAADE  470 (475)
T ss_dssp             CBTTEEEEEESSCH----------HHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEEEeCCch----------HHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence            23345556554211          134568888888886543 2   23 35999964 345899999999999998876


Q ss_pred             HH
Q 010250          503 TE  504 (514)
Q Consensus       503 ~~  504 (514)
                      +.
T Consensus       471 ~~  472 (475)
T 3k40_A          471 ME  472 (475)
T ss_dssp             HH
T ss_pred             Hh
Confidence            53

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.65  E-value=8.6e-15  Score=149.26  Aligned_cols=318  Identities=13%  Similarity=0.089  Sum_probs=192.4

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHH-HHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCcc
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKEL-LEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK  195 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L-~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~  195 (514)
                      ..|++++++.+.++...++     ...+...++++.+ +++++  ..+++++++||++|+..+++.+.      . ..++
T Consensus        14 ~~~~i~~a~~~~~~~~~~~-----~~~~~~~~l~~~~~a~~~g--~~~~~v~~~sgt~al~~al~~l~------~-~~Gd   79 (377)
T 3ju7_A           14 PVIEYLDELKEIDASHIYT-----NYGPINQRFEQTIMSGFFQ--NRGAVTTVANATLGLMAAIQLKK------R-KKGK   79 (377)
T ss_dssp             CGGGGHHHHHHHHHHTCCS-----SSCHHHHHHHHHHHHHTST--TCSEEEEESCHHHHHHHHHHHHS------C-TTCC
T ss_pred             CcHHHHHHHHHHHHcCCcc-----cCCHHHHHHHHHHHHHHhC--CCCeEEEeCCHHHHHHHHHHHcC------C-CCcC
Confidence            4678899999988764322     1134567899999 99874  14689999999999999998751      1 3357


Q ss_pred             EEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEE
Q 010250          196 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAA  274 (514)
Q Consensus       196 ~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aa  274 (514)
                      +||+.+..|.+........+..+.             .++.. +.|.             .+++++++.+.... .++.+
T Consensus        80 ~Vi~~~~~~~~~~~~~~~~G~~~~-------------~v~~~~~~~~-------------~d~~~l~~~i~~~~-~~tk~  132 (377)
T 3ju7_A           80 YALMPSFTFPATPLAAIWCGLEPY-------------FIDISIDDWY-------------MDKTVLWDKIEELK-EEVAI  132 (377)
T ss_dssp             EEEEESSSCTHHHHHHHHTTCEEE-------------EECBCTTTCS-------------BCHHHHHHHHHHHG-GGEEE
T ss_pred             EEEECCCCcHHHHHHHHHcCCEEE-------------EEecCCccCC-------------cCHHHHHHHHhcCC-CCceE
Confidence            899999998775432222211111             11110 1111             11577888773211 12666


Q ss_pred             EEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceeccc-CCCCchhchh----hhhcCCcccc
Q 010250          275 FIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY-SIKPDLVSFA----KALSSAYMPI  349 (514)
Q Consensus       275 vivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~-gv~pDiv~~s----K~l~gG~~pi  349 (514)
                      |+  |++ ..|...+    +++|.++|+ ||+++|+|++|+ +|..   +..... +...|+.++|    |.+++|  ..
T Consensus       133 v~--~~~-~~G~~~~----~~~i~~la~-~~~~vi~D~a~a-~g~~---~~~~~~g~~~~d~~~~S~~~~K~l~~g--~g  198 (377)
T 3ju7_A          133 VV--PYA-TFGSWMN----LEEYEELEK-KGVPVVVDAAPG-FGLM---NGGMHYGQDFSGMIIYSFHATKPFGIG--EG  198 (377)
T ss_dssp             EC--CBC-GGGBCCC----CHHHHHHHH-TTCCBEEECTTC-TTCE---ETTEETTTTCSSEEEEECBTTSSSCCB--SC
T ss_pred             EE--EEC-CCCCccC----HHHHHHHHh-cCCEEEEECCCc-cCCe---ECCEeccCCCCcEEEEECCCCCcCCCC--Cc
Confidence            66  333 3466665    899999999 999999999997 5422   111122 1224666554    998874  45


Q ss_pred             eeEEe-CHHHHHHhhhccCC-----CCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCC--
Q 010250          350 GAILV-SPEVSEVIHSQSNT-----LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS--  421 (514)
Q Consensus       350 g~v~~-~~~i~~~l~~~~~~-----~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~--  421 (514)
                      |+++. ++++.+.+......     ......+..+..+++.++.+++.++.++  ...++.+++.+++.+.|+++...  
T Consensus       199 G~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l~--~~~~~~~~~~~~~~~~L~~~~~~~~  276 (377)
T 3ju7_A          199 GLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKWD--DKLKERTRISEWYKQLLQSNGLMKK  276 (377)
T ss_dssp             EEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHHHHTTTTTT
T ss_pred             EEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcCCCCccc
Confidence            66666 56776666532110     0011224456677888888888776553  45677778888888888776321  


Q ss_pred             CceeEE--EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--------------------------C
Q 010250          422 PIIGEI--RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------------------------G  473 (514)
Q Consensus       422 ~~~~~v--~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------------------------g  473 (514)
                      +.....  .....++.+.+.+..           ..+.+.+.|.++||.++..                          .
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  345 (377)
T 3ju7_A          277 GWQLQKTEAVIQQFMPILCPEEV-----------RNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAK  345 (377)
T ss_dssp             TCBCCCCSCBCCSSEEEECCTTS-----------CHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHH
T ss_pred             cccCCCCCcceEEEEEEEeCChh-----------hHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHh
Confidence            111100  001112233332210           1456889999999987631                          0


Q ss_pred             CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          474 DNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       474 ~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      ..||+......|++|++++++.|++++..
T Consensus       346 ~~l~lp~~~~~t~~di~~v~~~l~~~~~~  374 (377)
T 3ju7_A          346 RIVSLPLWEGMTKEIVEQIVICLGQKVVS  374 (377)
T ss_dssp             HEEEECCCTTCCHHHHHHHHHHHTC----
T ss_pred             CEEECCCCCCCCHHHHHHHHHHHHHHHhc
Confidence            35888877789999999999999888764

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=99.64  E-value=6.2e-16  Score=158.55  Aligned_cols=273  Identities=12%  Similarity=0.085  Sum_probs=162.4

Q ss_pred             HHHHHHHHHhcCc----CCC-CeEEEeCChhHHHHHHHHHHHHHHhhcCCCCcc----EEEEEecCCcccceeeeecCCC
Q 010250          147 LDLAKELLEMFTA----SKM-AKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK----KFIARQKSYHGSTLIAASLSGL  217 (514)
Q Consensus       147 ~ela~~L~~~~~~----~~~-~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~----~ii~~~~~yHG~t~~~~~~s~~  217 (514)
                      .+|.+.+++++..    ... ++|++++++++|+..+++....       + ++    .|++.+++|.+........ |.
T Consensus        71 ~~lr~aia~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~-------~-Gd~~~~~Vlv~~P~y~~~~~~~~~~-g~  141 (391)
T 3bwn_A           71 PELEDAIKDLHGVVGNAATEDRYIVVGTGSTQLCQAAVHALSS-------L-ARSQPVSVVAAAPFYSTYVEETTYV-RS  141 (391)
T ss_dssp             HHHHHHHHHHHHHHCSBCCSSSEEEEEEHHHHHHHHHHHHHHH-------T-SSSSSEEEEECSSCCTHHHHHHHTT-CB
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCeEEEeCChHHHHHHHHHHhcC-------C-CCCCcceEEEcCCCchhHHHHHHHc-CC
Confidence            5677777766531    123 5899999999999999987641       2 34    7999999998764332221 11


Q ss_pred             ccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHH
Q 010250          218 PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKV  297 (514)
Q Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l  297 (514)
                      ...            .++..                   .+.++      . .++.+|++...++.+|.+.+      +|
T Consensus       142 ~~~------------~~~~d-------------------~~~l~------~-~~~k~v~l~~p~NPtG~~~~------~l  177 (391)
T 3bwn_A          142 GMY------------KWEGD-------------------AWGFD------K-KGPYIELVTSPNNPDGTIRE------TV  177 (391)
T ss_dssp             TTE------------EEEEE-------------------STTCC------C-CSCEEEEEESSCTTTCCCCC------CC
T ss_pred             eEE------------EecCC-------------------HHHcC------C-CCCEEEEECCCCCCCchhHH------HH
Confidence            110            00000                   01111      1 23445544444556676653      23


Q ss_pred             HHHHHhcC--CEEEEechhcCcccccccceecccCCCCchh--chhhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcc
Q 010250          298 QAVVKKYD--ILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSF  372 (514)
Q Consensus       298 ~~l~~~~g--illI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~  372 (514)
                      .+  ++|+  +++|+||+|. ++.. ..... ..+  .+++  +|||.++..++++|++++ ++++++.+...       
T Consensus       178 ~~--~~~~~~~~ii~De~y~-~~~~-~~l~~-~~~--~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~-------  243 (391)
T 3bwn_A          178 VN--RPDDDEAKVIHDFAYY-WPHY-TPITR-RQD--HDIMLFTFSKITGHAGSRIGWALVKDKEVAKKMVEY-------  243 (391)
T ss_dssp             C-------CCCEEEEECTTC-STTT-SCCCC-CBC--CSEEEEEHHHHHSCGGGCEEEEEECCHHHHHHHHHH-------
T ss_pred             HH--HhhcCCCEEEEeCCCC-CCCC-Ccccc-CCC--CeEEEEechhhcCCCccceEEEEecCHHHHHHHHHH-------
Confidence            33  2266  9999999996 2211 11111 111  2333  789988743389999997 88998887641       


Q ss_pred             cccCCCCCcHHHHHHHHHHHHHHh---------h---ccHHHHHHHHHHHHHhhhhhccCCCcee---E--------EEe
Q 010250          373 SHGFTYSGHPVSCAVAIEALKIYK---------E---RNIVEQVNKIAPKFQDGVKAFSDSPIIG---E--------IRG  429 (514)
Q Consensus       373 ~~~~t~~~~pl~~aaa~aal~~~~---------~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~---~--------v~g  429 (514)
                      ....+++.+++++.++.++|+...         +   +++.+.++++.+++.+.|+++....+..   .        ...
T Consensus       244 ~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~~~~~f~~~~~~~  323 (391)
T 3bwn_A          244 IIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPEAFCNYFGKSLES  323 (391)
T ss_dssp             HHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCCEEETTTTEEECC
T ss_pred             hcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccCCC
Confidence            122245678888888888887532         1   2356677778888888887652111100   0        122


Q ss_pred             eeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          430 TGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------GDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       430 ~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      .|+++++.+.+..              .+...+.++||.+.++      .+.+||+  +..+++++++++++|.+++++
T Consensus       324 ~g~~~~~~~~~~~--------------~~~~~l~~~gV~v~pg~~fg~~~~~iRis--~~~~~e~i~~~~~~L~~~~~~  386 (391)
T 3bwn_A          324 YPAFAWLGTKEET--------------DLVSELRRHKVMSRAGERCGSDKKHVRVS--MLSREDVFNVFLERLANMKLI  386 (391)
T ss_dssp             CCSEEEEEESSSC--------------CHHHHHHHTTEECEEGGGGTCCTTEEEEE--SCSCHHHHHHHHHHHHSCC--
T ss_pred             cceEEEecCCcHH--------------HHHHHHHHCCEEEccCCCCCCCCCEEEEE--ecCCHHHHHHHHHHHHHHHHh
Confidence            3456777775311              1456778899999874      3579999  456899999999999988754

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.62  E-value=1.7e-14  Score=148.29  Aligned_cols=293  Identities=11%  Similarity=0.042  Sum_probs=167.8

Q ss_pred             CCHHHHHHHHHHHhc-CCcc-ccccccCCchHHHHHHHHHHhcCcCCCCeEEE---eCChhHHHHHHHHHHHHHHhhcCC
Q 010250          117 SEPRLVAAATAQLNT-LPFY-HSFWNRTTKPSLDLAKELLEMFTASKMAKVFF---TNSGSEANDTQVKLVWYYNNALGR  191 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~-~~~~-~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~---~~sGseA~~~Alk~a~~~~~~~~~  191 (514)
                      |+++|++|+.+.... ..+. ++.+........+|++.++++++   .+.+++   ++||++|+..+++...        
T Consensus        30 n~~~vl~a~~~~~~~~~~~~~~~~~~y~~~~~~~Le~~lA~l~g---~e~alv~p~~~sGt~Ai~~al~all--------   98 (409)
T 3jzl_A           30 NQAKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLERVYATVFK---TEAALVRPQIISGTHAISTVLFGIL--------   98 (409)
T ss_dssp             HHHHHHHHHHHTTCCGGGGCCCCTTCTTCHHHHHHHHHHHHHHT---CSEEEEETTSCSHHHHHHHHHHHHC--------
T ss_pred             hHHHHHHHHHHhhhhhhccCCCcCCCCChhHHHHHHHHHHHHhC---CCcEEEECCCccHHHHHHHHHHHhc--------
Confidence            467788888775421 1111 11222233446789999999984   355666   8999999999988653        


Q ss_pred             CCccEEEEEe-cCCcccceeeeecCCC-ccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250          192 PNKKKFIARQ-KSYHGSTLIAASLSGL-PALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP  269 (514)
Q Consensus       192 ~~~~~ii~~~-~~yHG~t~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~  269 (514)
                      ..++.||+.+ +.|.+.... +...+. ......++   ..+..++....++             .+++++++.+.    
T Consensus        99 ~~GD~Vl~~~~~~y~~~~~~-~~~~g~~~~~l~~~G---~~~~~v~~~~~g~-------------~d~e~l~~ai~----  157 (409)
T 3jzl_A           99 RPDDELLYITGQPYDTLEEI-VGIRKQGQGSLKDFH---IGYSSVPLLENGD-------------VDFPRIAKKMT----  157 (409)
T ss_dssp             CTTCEEEECSSSCCTTHHHH-HTSSSSSSSCTGGGT---CEEEECCCCTTSC-------------CCHHHHHHHCC----
T ss_pred             CCCCEEEEeCCCCcHhHHHH-HhcccchhhHHHHcC---CEEEEeCCCCCCC-------------cCHHHHHHhcc----
Confidence            3346788887 666654311 000000 00000011   1111222211111             11466766653    


Q ss_pred             CcEEEEEEcc----ccCCCCcccCChhHHHHHHHHHHh--cCCEEEEechhcCcccccccceecccCCCCchh--chhhh
Q 010250          270 ETIAAFIAEP----VIGAGGVIPPPATYFEKVQAVVKK--YDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKA  341 (514)
Q Consensus       270 ~~~aavivEp----v~~~~G~~~p~~~~L~~l~~l~~~--~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~  341 (514)
                      +++++|++++    ++++.|.+.+    +++|.++|++  ||+++|+||+|..+ ..+    .+......|++  +++|.
T Consensus       158 ~~tklV~i~~s~g~p~nptg~v~~----l~~I~~la~~~~~~~~livD~a~~~~-~~~----~~p~~~g~Div~~S~sK~  228 (409)
T 3jzl_A          158 PKTKMIGIQRSRGYADRPSFTIEK----IKEMIVFVKNINPEVIVFVDNCYGEF-VEY----QEPPEVGADIIAGSLIKN  228 (409)
T ss_dssp             TTEEEEEEECSCTTSSSCCCCHHH----HHHHHHHHHHHCTTCEEEEECTTCTT-TSS----CCSGGGTCSEEEEETTSG
T ss_pred             CCCeEEEEECCCCCCCCCcCcccc----HHHHHHHHHhhCCCCEEEEeCCcccc-ccc----CCccccCCeEEEECcccc
Confidence            4688999998    8888888876    9999999999  99999999998733 211    11112235776  57899


Q ss_pred             hcCCccc-ceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC
Q 010250          342 LSSAYMP-IGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD  420 (514)
Q Consensus       342 l~gG~~p-ig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~  420 (514)
                      ++|++.+ .|++++++++++.+.......   ..+.+.+..+..+.+++..++.+  +...++..+++.++.+.|+++. 
T Consensus       229 lgg~~~~~GG~v~~~~~li~~l~~~~~~~---~~g~~~g~~~~~~~~~l~gl~~~--~~r~~~~~~~a~~la~~L~~~g-  302 (409)
T 3jzl_A          229 PGGGLAKTGGYIAGKEALVDLCGYRLTTP---GIGREAGASLYSLLEMYQGFFLA--PHVTAQAIKGARFTAAMLAEFG-  302 (409)
T ss_dssp             GGTTTCSSCEEEEECHHHHHHHHHHHSCT---TTGGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTT-
T ss_pred             CCccCCceEEEEEeCHHHHHHHHHHhccc---cccccccccHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHHHHHhCC-
Confidence            9986444 477889999999886521111   11122222221123344444433  2456778888889999998761 


Q ss_pred             CCce--eEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250          421 SPII--GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM  467 (514)
Q Consensus       421 ~~~~--~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv  467 (514)
                      ..+.  ....+..+++.+.+.+.           .....+++.|+....
T Consensus       303 ~~v~p~~~~~~~~~i~~i~l~~~-----------~~~~~~~~~L~~~~~  340 (409)
T 3jzl_A          303 VEADPVWDAPRTDLIQSVSFHNK-----------EKMVAFAQAIQAASP  340 (409)
T ss_dssp             CEEESCTTSCCSSSCCEEECSCH-----------HHHHHHHHHHHHTSS
T ss_pred             CcccCCCCCCCccEEEEEEeCCH-----------HHHHHHHHHHHhcCc
Confidence            1110  00111223666766432           135668888887753

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.57  E-value=1.5e-13  Score=150.50  Aligned_cols=322  Identities=13%  Similarity=0.084  Sum_probs=173.2

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH  221 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~  221 (514)
                      .....++.+.++++++   .+..+| ++++++|+.+++....        ..+++||+..++|+....+.+.++|.....
T Consensus       172 ~~~i~e~e~~lA~~~g---ae~~i~v~nGtt~an~~ai~al~--------~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~  240 (730)
T 1c4k_A          172 EGPAVAAEKHAARVYN---ADKTYFVLGGSSNANNTVTSALV--------SNGDLVLFDRNNHKSVYNSALAMAGGRPVY  240 (730)
T ss_dssp             BTHHHHHHHHHHHHTT---CSEEEEESSHHHHHHHHHHHHHC--------CTTCEEEEETTCCHHHHHHHTTTTCCEEEE
T ss_pred             hHHHHHHHHHHHHHHC---CCcEEEECCHHHHHHHHHHHHhc--------CCCCEEEEcCCchHHHHHHHHHHCCCEEEE
Confidence            3456789999999984   344454 5555699999988763        234577777766544332213333322110


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh------CCCc-EEEEEEccccCCCCcccCChhHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE------GPET-IAAFIAEPVIGAGGVIPPPATYF  294 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~------~~~~-~aavivEpv~~~~G~~~p~~~~L  294 (514)
                      ...        .   .+.|... ...+.+.+   +.+.|++++.+.      .+.. .++++.+|.  ..|.+.+    +
T Consensus       241 v~~--------~---~~~~~i~-g~id~e~L---~~~~le~~i~~~~~~~~~t~~~vklviv~~pn--~~G~v~d----l  299 (730)
T 1c4k_A          241 LQT--------N---RNPYGFI-GGIYDSDF---DEKKIRELAAKVDPERAKWKRPFRLAVIQLGT--YDGTIYN----A  299 (730)
T ss_dssp             ECE--------E---ECTTCCE-EEECGGGS---CHHHHHHHTTTSSHHHHTCSCCBSEEEEESBC--TTSEEEC----H
T ss_pred             EeC--------C---ccccCcc-CCCCHHHH---hhhHHHHHhhcCCcccccccCCCeEEEEECCC--CCCeecC----H
Confidence            000        0   0000000 00000100   012336666432      1011 345666663  4688876    9


Q ss_pred             HHHHHHHHhcCCEEEEechhcC-ccccc--c---cceecccCCC-Cc-hh--chhhhhcCCcccce-eEEeCHHHH----
Q 010250          295 EKVQAVVKKYDILFIADEVICA-FGRLG--T---MFGCDKYSIK-PD-LV--SFAKALSSAYMPIG-AILVSPEVS----  359 (514)
Q Consensus       295 ~~l~~l~~~~gillI~DEv~tG-~gr~G--~---~~~~~~~gv~-pD-iv--~~sK~l~gG~~pig-~v~~~~~i~----  359 (514)
                      ++|.++|++||++||+||+|.+ ++..+  .   ....+.++.+ |+ ++  +++|+|+|  .+.| +++.+++.+    
T Consensus       300 ~~I~~la~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g--~~~gg~I~v~~~~l~g~~  377 (730)
T 1c4k_A          300 HEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAG--FSQTSQIHKKDSHIKGQL  377 (730)
T ss_dssp             HHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSC--CTTCEEEEEECGGGTTST
T ss_pred             HHHHHHHHHcCCeEEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCC--CCCEEEEEecchhhcCcc
Confidence            9999999999999999999973 22111  1   1112223432 22 44  57899876  4444 453443321    


Q ss_pred             -----HHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhh-ccCCCceeE-E-E
Q 010250          360 -----EVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKA-FSDSPIIGE-I-R  428 (514)
Q Consensus       360 -----~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~-l~~~~~~~~-v-~  428 (514)
                           ..+..      .+....+.+.++..+++..++++.+..   +++.+++.++.+++++.|++ +....+... . .
T Consensus       378 ~~i~~~~~~~------~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~  451 (730)
T 1c4k_A          378 RYCDHKHFNN------SFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVN  451 (730)
T ss_dssp             TCCCHHHHHH------HHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEET
T ss_pred             cccCHHHHHH------HHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEccccccc
Confidence                 11111      011122445566666666677776654   35678888889999999987 422211110 0 0


Q ss_pred             -------------------------------e--eee--e----EEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEE
Q 010250          429 -------------------------------G--TGL--I----LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV  469 (514)
Q Consensus       429 -------------------------------g--~g~--~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~  469 (514)
                                                     +  .+.  +    +.+..+........+......+..+.+.|.++||.+
T Consensus       452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v  531 (730)
T 1c4k_A          452 GKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIP  531 (730)
T ss_dssp             TEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCC
T ss_pred             cccccccccccccccchhhccCccchhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEE
Confidence                                           0  010  0    222221100000000000012566888999999998


Q ss_pred             EeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          470 RVSG-DNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       470 ~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      ...+ ..+|++++..+|+++++.++++|.+..+...
T Consensus       532 ~~~~~~~ir~~~s~g~t~e~i~~Ll~aL~~i~~~~~  567 (730)
T 1c4k_A          532 EKSDLNSILFLMTPAETPAKMNNLITQLLQLQRLIE  567 (730)
T ss_dssp             SEECSSEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EECCCCeEEEEeCCCCCHHHHHHHHHHHHHHHHhcc
Confidence            7655 5699999999999999999999998876553

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.55  E-value=3.9e-13  Score=138.63  Aligned_cols=294  Identities=12%  Similarity=0.049  Sum_probs=166.4

Q ss_pred             CCHHHHHHHHHHHhcCC-cc-ccccccCCchHHHHHHHHHHhcCcCCCCeEEE---eCChhHHHHHHHHHHHHHHhhcCC
Q 010250          117 SEPRLVAAATAQLNTLP-FY-HSFWNRTTKPSLDLAKELLEMFTASKMAKVFF---TNSGSEANDTQVKLVWYYNNALGR  191 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~-~~-~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~---~~sGseA~~~Alk~a~~~~~~~~~  191 (514)
                      |+++|++|+.+...... +. ...+........+++++++++++   .+.+++   ++||++|+..++....        
T Consensus        45 n~~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~g~~~Le~~lA~l~g---~e~alv~p~~~sGt~A~~~al~all--------  113 (427)
T 3hvy_A           45 NQLKVLKAFQEERISESHFTNSSGYGYNDIGRDSLDRVYANIFN---TESAFVRPHFVNGTHAIGAALFGNL--------  113 (427)
T ss_dssp             HHHHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHT---CSEEEEETTCCSHHHHHHHHHHHTC--------
T ss_pred             hHHHHHHHHHHHHHHHHhcccCcCCCCCchhHHHHHHHHHHHhC---CCceEEeCCCCcHHHHHHHHHHHhc--------
Confidence            45778888777532110 00 11122233346788999999984   455666   8999999999887653        


Q ss_pred             CCccEEEEEe-cCCcccc-eeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250          192 PNKKKFIARQ-KSYHGST-LIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP  269 (514)
Q Consensus       192 ~~~~~ii~~~-~~yHG~t-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~  269 (514)
                      ..++.||+.+ +.|++.. ....+..........++   ..+..++. +.+.             .+.+++++++.+.  
T Consensus       114 ~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G---~~~~~v~~-~~~~-------------~d~e~l~~~i~~~--  174 (427)
T 3hvy_A          114 RPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYG---VKYKMVDL-KDGK-------------VDINTVKEELKKD--  174 (427)
T ss_dssp             CTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGT---CEEEECCC-BTTB-------------CCHHHHHHHHHHC--
T ss_pred             CCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcC---CEEEEecC-CCCC-------------cCHHHHHHHhhCC--
Confidence            3457888888 7787653 11000000000000011   01111121 1110             1257788877631  


Q ss_pred             CcEEEEEEcc----ccCCCCcccCChhHHHHHHHHHHh--cCCEEEEechhcCcccccccceecccCCCCchh--chhhh
Q 010250          270 ETIAAFIAEP----VIGAGGVIPPPATYFEKVQAVVKK--YDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKA  341 (514)
Q Consensus       270 ~~~aavivEp----v~~~~G~~~p~~~~L~~l~~l~~~--~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~  341 (514)
                      +++++|++++    +.++.|.+.+    +++|+++|++  ||+++|+||+|..+......     .....|++  +++|.
T Consensus       175 ~~tklV~i~~s~gyp~nptg~v~d----l~~i~~ia~~~~~g~~livD~a~~~~~~~~~p-----~~~gaDiv~~S~sK~  245 (427)
T 3hvy_A          175 DSIKLIHIQRSTGYGWRKSLRIAE----IAEIIKSIREVNENVIVFVDNCYGEFVEEKEP-----TDVGADIIAGSLIKN  245 (427)
T ss_dssp             TTEEEEEEESSCCSSSSCCCCHHH----HHHHHHHHHHHCSSSEEEEECTTCTTTSSSCG-----GGGTCSEEEEETTSG
T ss_pred             CCCEEEEEECCCCCCCCccccHHH----HHHHHHHHHHhCCCCEEEEECCccccccCCCC-----cccCCeEEEECCccc
Confidence            3578999999    7788887765    9999999999  89999999998743111111     11234766  57899


Q ss_pred             hcCCccc-ceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC
Q 010250          342 LSSAYMP-IGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD  420 (514)
Q Consensus       342 l~gG~~p-ig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~  420 (514)
                      ++|++.+ .|++++++++++.+.......   ..+.+.+.++..+..++..++.+  +...++..++..++.+.|+++..
T Consensus       246 lgg~g~~~GG~i~~~~~li~~l~~~~~~~---~~g~~~~~~~~~a~~~~~gl~~~--~~r~~~~~~~a~~la~~L~~~g~  320 (427)
T 3hvy_A          246 IGGGIATTGGYIAGKEEYVTQATFRVTVP---GIGGECGSTFGVMRSLYEGLFMA--PHVTIEAVKGAVFCARIMELAGF  320 (427)
T ss_dssp             GGTTTCCSCEEEEECHHHHHHHHHHHSCT---TTGGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ccccccceEEEEEECHHHHHHHHHHhhcC---CcccccCCCHHHHHHHHHhHhHH--HHHHHHHHHHHHHHHHHHHhCCC
Confidence            9986444 477888999999887521111   11112222122233344444433  24567788888889888887611


Q ss_pred             --CCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250          421 --SPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG  466 (514)
Q Consensus       421 --~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G  466 (514)
                        +|. ..-.+..+++.+.+.+..           ....|++.++...
T Consensus       321 ~V~p~-~~~~~~~li~~~~l~~~~-----------~~~~f~~~l~~~~  356 (427)
T 3hvy_A          321 DVLPK-YNDKRTDIIQAIKFNDEK-----------KLIDFIKGIQTAS  356 (427)
T ss_dssp             EEESC-TTSCCSSSEEEEECSSHH-----------HHHHHHHHHHHTC
T ss_pred             eecCC-CCCCCceEEEEEeCCCHH-----------HHHHHHHHhcccc
Confidence              010 000112226777764321           3556777777653

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.54  E-value=4.5e-13  Score=138.17  Aligned_cols=289  Identities=12%  Similarity=0.051  Sum_probs=164.9

Q ss_pred             CHHHHHHHHHHHh--c-CCccccccccCCchHHHHHHHHHHhcCcCCCCeEEE---eCChhHHHHHHHHHHHHHHhhcCC
Q 010250          118 EPRLVAAATAQLN--T-LPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFF---TNSGSEANDTQVKLVWYYNNALGR  191 (514)
Q Consensus       118 ~p~v~~A~~~~l~--~-~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~---~~sGseA~~~Alk~a~~~~~~~~~  191 (514)
                      .++|++|+.+...  . ... ...+........+|+++++++++   .+..++   ++||++|+..++....        
T Consensus        45 ~~~Vl~A~~~~~~~~~~~~~-~~gy~y~~~~~~~Le~~lA~l~g---~e~alv~p~~~sGt~Ai~~al~all--------  112 (427)
T 3i16_A           45 QLKVLNAFQEERISEAHFTN-SSGYGYGDIGRDSLDAVYARVFN---TESALVRPHFVNGTHALGAALFGNL--------  112 (427)
T ss_dssp             HHHHHHHHHHTTCCGGGSCC-CCTTCTTCHHHHHHHHHHHHHHT---CSEEEEETTCCSHHHHHHHHHHHHC--------
T ss_pred             HHHHHHHHHHhchhHHhcCC-CCCCCCCHHHHHHHHHHHHHHhC---CcceEEeCCCccHHHHHHHHHHHHh--------
Confidence            4677777766421  1 111 11222233346788999999984   345566   8999999999987653        


Q ss_pred             CCccEEEEEe-cCCcccc-eeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250          192 PNKKKFIARQ-KSYHGST-LIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP  269 (514)
Q Consensus       192 ~~~~~ii~~~-~~yHG~t-~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~  269 (514)
                      ..+++||+.+ +.|++.. ..+...++.......++   ..+..++....+             ..+++++++++.+  .
T Consensus       113 ~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G---~~~~~v~~~~~g-------------~~D~e~l~~~l~~--~  174 (427)
T 3i16_A          113 RPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFG---INYKQVDLKEDG-------------KPNLEEIEKVLKE--D  174 (427)
T ss_dssp             CTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGT---CEEEECCCCTTS-------------SCCHHHHHHHHHT--C
T ss_pred             CCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcC---CEEEEecCccCC-------------CcCHHHHHHHhhC--C
Confidence            2346788887 6776653 11111000000000011   011111211000             1125778887753  1


Q ss_pred             CcEEEEEEcc----ccCCCCcccCChhHHHHHHHHHHh--cCCEEEEechhcCcccccccceecccCCCCchh--chhhh
Q 010250          270 ETIAAFIAEP----VIGAGGVIPPPATYFEKVQAVVKK--YDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKA  341 (514)
Q Consensus       270 ~~~aavivEp----v~~~~G~~~p~~~~L~~l~~l~~~--~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv--~~sK~  341 (514)
                      +++++|++++    ++++.|.+.+    +++|.++|++  ||+++|+||+|..+......     .....|++  +++|.
T Consensus       175 ~~tklV~i~~s~~~p~nptg~i~d----l~~i~~la~~~~~g~~livD~a~~~~~~~~~p-----~~~gaDiv~~S~sK~  245 (427)
T 3i16_A          175 ESITLVHIQRSTGYGWRRALLIED----IKSIVDCVKNIRKDIICFVDNCYGEFMDTKEP-----TDVGADLIAGSLIKN  245 (427)
T ss_dssp             TTEEEEEEECSCCSSSSCCCCHHH----HHHHHHHHHHHCTTSEEEEECTTTTTSSSSCG-----GGGTCSEEEEETTSG
T ss_pred             CCCEEEEEEcCCCCCCCCcccHHH----HHHHHHHHHHhCCCCEEEEECCCccccccCCc-----cccCCeEEEecCccc
Confidence            3688999999    7888888866    9999999999  99999999999743211111     11234766  57899


Q ss_pred             hcCCc-ccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHH-HHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc
Q 010250          342 LSSAY-MPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVS-CAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS  419 (514)
Q Consensus       342 l~gG~-~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~-~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~  419 (514)
                      ++|++ ...|++++++++++.+.......   ..+.+.+. .+. +..++..++.+  +...++..+++.++.+.|+++ 
T Consensus       246 lgg~g~~~gG~i~~~~~li~~l~~~~~~~---~~g~~~~~-~~~~a~~~l~gl~~~--~~r~~~~~~~a~~la~~L~~~-  318 (427)
T 3i16_A          246 IGGGIAPTGGYLAGTKDCIEKTSYRLTVP---GIGGECGS-TFGVVRSMYQGLFLA--PHISMEALKGAILCSRIMELA-  318 (427)
T ss_dssp             GGTTTCCSCEEEEECHHHHHHHHHHHSCT---TTGGGCCC-CTTCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHT-
T ss_pred             CCCCCCceEEEEEECHHHHHHHHHhcccC---ccCccCCc-cHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhC-
Confidence            99865 34578889999999887521110   11111111 022 33333344433  345677888888888888876 


Q ss_pred             CCCceeEEEee-----eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC
Q 010250          420 DSPIIGEIRGT-----GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG  466 (514)
Q Consensus       420 ~~~~~~~v~g~-----g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G  466 (514)
                        +... ..+.     .+++.+.+.+..           .+..|++.|+...
T Consensus       319 --g~~V-~p~~~~~~~~~i~~i~l~~~~-----------~~~~f~~~l~~~~  356 (427)
T 3i16_A          319 --GFEV-MPKYDEKRSDIIQSIKFNDKD-----------KLIEFCKGIQTGS  356 (427)
T ss_dssp             --TCEE-ESCTTSCCSSSCEEEECSSHH-----------HHHHHHHHHHHTC
T ss_pred             --CCee-cCCCCCCCccEEEEEEECCHH-----------HHHHHHHHHhhcC
Confidence              2110 1112     226777775321           3567888888764

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.52  E-value=7.6e-14  Score=145.12  Aligned_cols=290  Identities=11%  Similarity=0.092  Sum_probs=160.9

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeee----ecCCCc
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA----SLSGLP  218 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~----~~s~~~  218 (514)
                      .+...++.++++++++. +.++++++++|+.++++++..++ .      .++++||+.+..|+... ..+    ...|..
T Consensus       107 ~~~~~~~~~~la~~~g~-~~~~i~~~~g~taa~ea~~~a~~-~------~~gd~Viv~~~~h~s~~-~~~~~~a~~~G~~  177 (438)
T 1wyu_A          107 LQATFEYQTMIAELAGL-EIANASMYDGATALAEGVLLALR-E------TGRMGVLVSQGVHPEYR-AVLRAYLEAVGAK  177 (438)
T ss_dssp             HHHHHHHHHHHHHHHTS-SEECSCBSSHHHHHHHHHHHHHH-H------HTCCEEEEETTSCHHHH-HHHHHHHHHTTCE
T ss_pred             HHHHHHHHHHHHHHhCC-CccceEEeCcHHHHHHHHHHHHh-c------CCCCEEEEcCccCHhHH-HHHHHHHHHCCCE
Confidence            35567888999998843 33456789988855555543332 1      13467888776664432 111    111211


Q ss_pred             cccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ  298 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~  298 (514)
                      .            ..++. +.++.+                +++ +   . +++++|++... +..|.+.+    +++|.
T Consensus       178 v------------~~v~~-~~~~~d----------------~~~-i---~-~~t~~v~i~~p-n~tG~~~~----l~~i~  218 (438)
T 1wyu_A          178 L------------LTLPL-EGGRTP----------------LPE-V---G-EEVGAVVVQNP-NFLGALED----LGPFA  218 (438)
T ss_dssp             E------------EEECC-BTTBCC----------------CCC-C---C-TTEEEEEEESS-CTTSBCCC----HHHHH
T ss_pred             E------------EEEcC-cCCccC----------------HHH-h---C-CCeEEEEEECC-CCCeEEec----HHHHH
Confidence            1            11111 111110                111 2   1 34666666665 77888876    99999


Q ss_pred             HHHHhcCCEEEEech-hcCcccccccceecccCCCCchhchh-hhhc----CCcccceeEEeCHHHHHHhhhcc-----C
Q 010250          299 AVVKKYDILFIADEV-ICAFGRLGTMFGCDKYSIKPDLVSFA-KALS----SAYMPIGAILVSPEVSEVIHSQS-----N  367 (514)
Q Consensus       299 ~l~~~~gillI~DEv-~tG~gr~G~~~~~~~~gv~pDiv~~s-K~l~----gG~~pig~v~~~~~i~~~l~~~~-----~  367 (514)
                      ++|++||+++|+|-- ++ +|.....   ..+  .+|+++++ |.++    .|+..+|++++++++++.+....     .
T Consensus       219 ~la~~~g~~vivd~d~~a-~g~~~~~---~~~--g~D~~~~s~kk~~~~~~~~Gp~~G~l~~~~~~~~~l~~~~~g~~~~  292 (438)
T 1wyu_A          219 EAAHGAGALFVAVADPLS-LGVLKPP---GAY--GADIAVGDGQSLGLPMGFGGPHFGFLATKKAFVRQLPGRLVSETVD  292 (438)
T ss_dssp             HHHHHTTCEEEEECCTTG-GGTBCCH---HHH--TCSEEEEECTTTTCCCGGGCSCCEEEEECGGGGGGCCSCCEEEEEB
T ss_pred             HHHHHcCCEEEEEechhh-ccCcCCC---ccC--CCCEEEECCcccCCCccCCCCCeeEEEEcHHHHHhCCCceeccccc
Confidence            999999999996622 32 3322111   122  36888764 6432    12147899999998877653110     0


Q ss_pred             CCC--cc------------cccCCCCC---cHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEE
Q 010250          368 TLG--SF------------SHGFTYSG---HPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI  427 (514)
Q Consensus       368 ~~~--~~------------~~~~t~~~---~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v  427 (514)
                      ..+  .+            ....|++.   +.++..++...++.+.+   +++.++..++.+++.+.|+++....+... 
T Consensus       293 ~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~-  371 (438)
T 1wyu_A          293 VEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTP-  371 (438)
T ss_dssp             TTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSC-
T ss_pred             cCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCC-
Confidence            000  00            00123322   23332222223444433   34567788888899998887632221111 


Q ss_pred             EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEE--Eee----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          428 RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV--RVS----GDNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       428 ~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~--~~~----g~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                        ...+..+.+....           ....+.+.|.++|+.+  .+.    .+.||+++...+|++|+++++++|++++
T Consensus       372 --~~~~~~~~~~~~~-----------~~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~l  437 (438)
T 1wyu_A          372 --KPFFNEFALALPK-----------DPEAVRRALAERGFHGATPVPREYGENLALFAATELHEEEDLLALREALKEVL  437 (438)
T ss_dssp             --SSBCSEEEEECSS-----------CHHHHHHHHHHTTCCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred             --CCeEEEEEEeCCC-----------CHHHHHHHHHHCCceeccccccccCCCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence              1222222232110           1456888999999998  433    4679999988899999999999998764

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.51  E-value=2.4e-14  Score=145.12  Aligned_cols=330  Identities=11%  Similarity=-0.002  Sum_probs=189.0

Q ss_pred             CCCCCHHHHHHHHHHHhcCCcc-cccc------ccCCchHHHHHHHHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHH
Q 010250          114 LGGSEPRLVAAATAQLNTLPFY-HSFW------NRTTKPSLDLAKELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYY  185 (514)
Q Consensus       114 lGh~~p~v~~A~~~~l~~~~~~-~~~~------~~~~~~~~ela~~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~  185 (514)
                      .+.-+|+|++|+.+.+.+.... .+..      ....+...+..+.|+++++..+..+|+| +.|||+|++.+++.....
T Consensus        21 ~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~~  100 (377)
T 3e77_A           21 QSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGL  100 (377)
T ss_dssp             SCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGGG
T ss_pred             cCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccCC
Confidence            4456899999999987542110 0100      0012345566778888885433357888 589999999999865310


Q ss_pred             HhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHH
Q 010250          186 NNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLIL  265 (514)
Q Consensus       186 ~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~  265 (514)
                            ..+++++....+.++...... +       +.++.   .+..++++..+.. .            +++++..+ 
T Consensus       101 ------~~Gd~v~~~~~g~~~~~~~~~-a-------~~~G~---~~~~~~~~~~~~~-~------------~~~~~~~i-  149 (377)
T 3e77_A          101 ------KAGRCADYVVTGAWSAKAAEE-A-------KKFGT---INIVHPKLGSYTK-I------------PDPSTWNL-  149 (377)
T ss_dssp             ------STTCEEEECCCSHHHHHHHHH-H-------TTTSE---EEECSCCCSSSCS-C------------CCGGGCCC-
T ss_pred             ------CCCCeEEEEECCHHHHHHHHH-H-------HHhCC---ceEEeccCCCcCC-C------------CChHHhcc-
Confidence                  113567766666665421100 0       00110   0011111111000 0            01122112 


Q ss_pred             HhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhc
Q 010250          266 KEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALS  343 (514)
Q Consensus       266 ~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~  343 (514)
                        . +++.+|.+-.+.+..|++.|    +     +|+++|+++++|-+|+ +|..  ..-++.++    ++++|  |.+ 
T Consensus       150 --~-~~t~lV~~~h~et~tG~~~p----i-----i~~~~~~~~~vD~~q~-~g~~--~id~~~~~----~~~~s~~K~~-  209 (377)
T 3e77_A          150 --N-PDASYVYYCANETVHGVEFD----F-----IPDVKGAVLVCDMSSN-FLSK--PVDVSKFG----VIFAGAQKNV-  209 (377)
T ss_dssp             --C-TTCSCEEEESEETTTTEECS----S-----CCCCTTCCEEEECTTT-TTSS--CCCGGGCS----EEEEEGGGTT-
T ss_pred             --C-CCccEEEEeCccCchheEch----h-----hhccCCCEEEEEcccc-cCCC--CCchhhcC----EEEEeccccc-
Confidence              2 34555555555556688887    3     4789999999999998 5433  33334444    34444  999 


Q ss_pred             CCcccceeEEeCHHHHHHhhhccCCC---C-cccccCCCCC-cHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHhh
Q 010250          344 SAYMPIGAILVSPEVSEVIHSQSNTL---G-SFSHGFTYSG-HPVSCAVAIEALKIYKER----NIVEQVNKIAPKFQDG  414 (514)
Q Consensus       344 gG~~pig~v~~~~~i~~~l~~~~~~~---~-~~~~~~t~~~-~pl~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~  414 (514)
                      |+ ..+|++++++++.+.+.+.....   . ....+.+++. +..+..+..++|+.+.+.    ++.++.+++.++++++
T Consensus       210 gp-~G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~  288 (377)
T 3e77_A          210 GS-AGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEI  288 (377)
T ss_dssp             SC-TTCEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred             CC-CccEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHH
Confidence            44 56899999988765443211000   0 0011233333 444555666788887654    3567888888999999


Q ss_pred             hhhccCCCc-eeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CEEEEeCCCCCCHHHH
Q 010250          415 VKAFSDSPI-IGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEV  489 (514)
Q Consensus       415 L~~l~~~~~-~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~iRi~p~~~~t~e~i  489 (514)
                      |+++....+ ..+. ...+.++.|.+++....       .++...+...+.++||.+.++.   ..+|++....+|+|||
T Consensus       289 L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~~-------~~~~~~~l~~l~~~Gi~~~~g~~~~g~iRiS~~~~~t~edI  361 (377)
T 3e77_A          289 IDNSQGFYVCPVEPQNRSKMNIPFRIGNAKGD-------DALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDV  361 (377)
T ss_dssp             HHTSTTSEECCSCGGGBCSSEEEEEESSTTCC-------HHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHH
T ss_pred             HHhcCCceecCCCHHHcCCcEEEEEcCCCCCc-------hhHHHHHHHHHHHCCcEEeCCCCcCCEEEEECCCCCCHHHH
Confidence            887632110 0011 11233567777542210       1122346677788999986541   4599999999999999


Q ss_pred             HHHHHHHHHHHHH
Q 010250          490 DELISKYGKALKA  502 (514)
Q Consensus       490 d~~~~~l~~~l~~  502 (514)
                      |.+++.|++++++
T Consensus       362 d~l~~al~~~~~~  374 (377)
T 3e77_A          362 QKLAAFMKKFLEM  374 (377)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999988764

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=99.51  E-value=5.7e-14  Score=145.58  Aligned_cols=325  Identities=12%  Similarity=-0.004  Sum_probs=183.0

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhc-CCcc--ccccc-cCCchHHHHHHHHHHhcCc-----CCCCeEEEe
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNT-LPFY--HSFWN-RTTKPSLDLAKELLEMFTA-----SKMAKVFFT  168 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~-~~~~--~~~~~-~~~~~~~ela~~L~~~~~~-----~~~~~v~~~  168 (514)
                      +.+..+||..|..  .++ .++.+.+++.+.+.. ....  +.... + .....+|.+.|++++..     ...++++++
T Consensus        54 ~~~~~i~l~~g~~--~~~-~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G-~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t  129 (427)
T 2hox_A           54 IQGCSADVASGDG--LFL-EEYWKQHKEASAVLVSPWHRMSYFFNPVS-NFISFELEKTIKELHEVVGNAAAKDRYIVFG  129 (427)
T ss_dssp             CTTCCEECCSCCC--GGG-HHHHTTSHHHHCEEECTTTTCSSSCSSCC-TTCCHHHHHHHHHHHHHHTCBCCTTCEEEEE
T ss_pred             CCCceEEecCcCC--CCC-CCHHHHHhHHhhhhcCCcccccCCCCCCC-ccchHHHHHHHHHHHHHhCCcCCCCCEEEEe
Confidence            3455678766632  232 345677777776632 1111  11111 1 11145666666666531     245799999


Q ss_pred             CChhHHHHHHHHHHHHHHh-hcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCC
Q 010250          169 NSGSEANDTQVKLVWYYNN-ALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGE  247 (514)
Q Consensus       169 ~sGseA~~~Alk~a~~~~~-~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (514)
                      +|+++|+..+++....... .+. ..++.|++.+++|.+........+....         .          |..     
T Consensus       130 ~G~~~al~~~~~~l~~~~~~~~~-~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~---------~----------~~~-----  184 (427)
T 2hox_A          130 VGVTQLIHGLVISLSPNMTATPD-APESKVVAHAPFYPVFREQTKYFDKKGY---------V----------WAG-----  184 (427)
T ss_dssp             SHHHHHHHHHHHHHSCCTTTCTT-SCCEEEEECSSCCHHHHHHHHHSCBTTE---------E----------EEE-----
T ss_pred             CCHHHHHHHHHHHHhhccccccC-CCCCEEEEeCCCcccHHHHHHHcCCeee---------e----------ecC-----
Confidence            9999999999987610000 000 3346899999999776433322221110         0          000     


Q ss_pred             ChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceec
Q 010250          248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCD  327 (514)
Q Consensus       248 ~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~  327 (514)
                              +.++|++.+.    +++.+|++...++.+|.+.+  +.+       +  ++..|.||.+-+    . .....
T Consensus       185 --------d~~~l~~~~~----~~~k~v~l~~p~NPtG~~~~--~~l-------~--~~~~i~d~~~~~----~-~~s~~  236 (427)
T 2hox_A          185 --------NAANYVNVSN----PEQYIEMVTSPNNPEGLLRH--AVI-------K--GCKSIYDMVYYW----P-HYTPI  236 (427)
T ss_dssp             --------EGGGGTTCSC----GGGEEEEEESSCTTTCCCCC--CSS-------T--TCEEEEECTTCS----T-TTSCC
T ss_pred             --------CHHHHHHhhc----CCceEEEEcCCCCCcccccH--HHH-------c--CCCEEEeecccC----C-CCCcc
Confidence                    0234444332    13344444444556666655  322       2  566788887632    1 11111


Q ss_pred             ccCCCCchh--chhhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-------
Q 010250          328 KYSIKPDLV--SFAKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-------  397 (514)
Q Consensus       328 ~~gv~pDiv--~~sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-------  397 (514)
                      ......+++  +|||.++..++++|++++ ++++++.+...       ....+++.+++++.++.++|+...+       
T Consensus       237 ~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~-------~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~  309 (427)
T 2hox_A          237 KYKADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNY-------MTKNTEGTPRETQLRSLKVLKEVVAMVKTQKG  309 (427)
T ss_dssp             CSCBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHH-------HHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ccCCCceEEEEeChhcCCCCCceEEEEEECCHHHHHHHHHH-------HHhcCCCCCHHHHHHHHHHhhcchhhhccccc
Confidence            111123444  689988743389999999 58998888641       2223456778888877777764321       


Q ss_pred             --c----cHHHHHHHHHHHHHhhhhhccCCCc-----------eeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHH
Q 010250          398 --R----NIVEQVNKIAPKFQDGVKAFSDSPI-----------IGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFG  459 (514)
Q Consensus       398 --~----~~~~~~~~~~~~l~~~L~~l~~~~~-----------~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~  459 (514)
                        +    ...++++++.+++.+.|+++....+           +.... .-|+++++.+..+.             ..++
T Consensus       310 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~~-------------~~~~  376 (427)
T 2hox_A          310 TMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEE-------------DKDC  376 (427)
T ss_dssp             STTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSGG-------------GCSH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCCcH-------------HHHH
Confidence              1    2356677778888888876522111           00111 22566777875311             1144


Q ss_pred             HHH-HHCCcEEEee------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          460 AQC-EKHGMLVRVS------GDNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       460 ~~l-~~~Gv~~~~~------g~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      ..+ .++||.++++      .+.+|++.  ..++++|++++++|.++++
T Consensus       377 ~~ll~~~gI~v~pg~~f~~~~~~~Ris~--~~~~e~l~~~l~~l~~~~~  423 (427)
T 2hox_A          377 YQTFQNGRINTQNGVGFEASSRYVRLSL--IKTQDDFDQLMYYLKDMVK  423 (427)
T ss_dssp             HHHHHHTTEECEEGGGGTSCTTEEEEEC--SSCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHCCEEEcCCCccCCCCCEEEEEe--cCCHHHHHHHHHHHHHHHh
Confidence            555 4789999874      35799994  5699999999999998874

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.49  E-value=7.3e-13  Score=133.69  Aligned_cols=329  Identities=11%  Similarity=-0.002  Sum_probs=185.8

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-cccc-----c-cCCchHHHHHHHHHHhcCcCCCCeEEE-eCChh
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFW-----N-RTTKPSLDLAKELLEMFTASKMAKVFF-TNSGS  172 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~~~-----~-~~~~~~~ela~~L~~~~~~~~~~~v~~-~~sGs  172 (514)
                      +.+.|..|..     --+|+|++|+.+.+.+.... .+.+     + ...+...+..+.+++++...+..+|+| ++|||
T Consensus         5 ~~~~f~pgpt-----~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T   79 (361)
T 3m5u_A            5 RKINFSAGPS-----TLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGAS   79 (361)
T ss_dssp             CCEECCSSSC-----CCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHH
T ss_pred             ceEeecCCCC-----CCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHH
Confidence            4445555532     14899999999887532110 0100     0 012445566778888885433457888 99999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY  252 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (514)
                      ||++.+++...        ++ +++.....+.++.......        +.++   ..+..++++..  .... ..    
T Consensus        80 ~a~n~~~~~~~--------~~-~~~~~i~~~~~~~~~~~~a--------~~~G---~~v~~~~~~~~--g~~~-~~----  132 (361)
T 3m5u_A           80 LQFAMIPMNLA--------LN-GVCEYANTGVWTKKAIKEA--------QILG---VNVKTVASSEE--SNFD-HI----  132 (361)
T ss_dssp             HHHHHHHHHHC--------CS-SCEEEEECSHHHHHHHHHH--------HHTT---CCEEEEEECTT--TTSC-SC----
T ss_pred             HHHHHHHHhcC--------CC-CeEEEEeCCHHHHHHHHHH--------HHcC---CceEEEecccC--cCCC-cC----
Confidence            99999998652        22 3343333334443211000        0001   00111111110  0000 00    


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC
Q 010250          253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK  332 (514)
Q Consensus       253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~  332 (514)
                          .++ +  +.    +++.+|.+-.+.+..|++.|.         +++ +|+++++|-+|+ +|..  .  ++..+  
T Consensus       133 ----~~~-~--l~----~~t~lv~~~~~e~~tG~~~~~---------i~~-~~~~~~vD~~q~-~g~~--~--id~~~--  184 (361)
T 3m5u_A          133 ----PRV-E--FS----DNADYAYICSNNTIYGTQYQN---------YPK-TKTPLIVDASSD-FFSR--K--VDFSN--  184 (361)
T ss_dssp             ----CCC-C--CC----TTSSEEEEESEETTTTEECSS---------CCC-CSSCEEEECGGG-TTSS--C--CCCTT--
T ss_pred             ----Chh-h--cC----CCCCEEEEeCCCCCcceeCCc---------ccc-cCCEEEEEcccc-cCCC--C--CCccc--
Confidence                011 2  21    234455554444555887652         333 499999999998 5433  2  22222  


Q ss_pred             Cchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcc------cccCCCC-CcHHHHHHHHHHHHHHhhc-c---
Q 010250          333 PDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF------SHGFTYS-GHPVSCAVAIEALKIYKER-N---  399 (514)
Q Consensus       333 pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~------~~~~t~~-~~pl~~aaa~aal~~~~~~-~---  399 (514)
                      .|++++|  |.+ |. ..+|++++++++.+.+.+...+ ..+      ..+.+++ .|..+..+..++++.+.+. +   
T Consensus       185 ~d~~~~s~~K~~-gp-~G~g~l~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~  261 (361)
T 3m5u_A          185 IALFYGGVQKNA-GI-SGLSCIFIRKDMLERSKNKQIP-SMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDK  261 (361)
T ss_dssp             EEEEEEETTTTS-SC-TTCEEEEEEHHHHHHHHTCCCC-GGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHH
T ss_pred             CCEEEEechhcc-CC-CccEEEEEcHHHHhhhcCCCCC-ceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHH
Confidence            4777776  888 44 5689999999998877641000 000      1223333 3445566666889988765 3   


Q ss_pred             HHHHHHHHHHHHHhhhhhccCC-CceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---C
Q 010250          400 IVEQVNKIAPKFQDGVKAFSDS-PIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---D  474 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l~~~-~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~  474 (514)
                      +.++.+++.++++++|+++... ...... .....++.+.+++..          .....+...|.++||.+..+.   .
T Consensus       262 i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~----------~~~~~~~~~L~~~gI~~~~g~~~~g  331 (361)
T 3m5u_A          262 VHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNK----------DLEPLFVKEAEEAGMIGLKGHRILG  331 (361)
T ss_dssp             HHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSCT----------THHHHHHHHHHHTTEECCBCCTTTC
T ss_pred             HHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCch----------hhhHHHHHHHHHCCCEEecCCCccC
Confidence            5677888889999998876311 110110 112235666665311          012346688889999986542   4


Q ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          475 NIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       475 ~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      .+|+++...+|++|||.+++.|++..++
T Consensus       332 ~iRiS~~~~~t~edId~l~~al~~~~~~  359 (361)
T 3m5u_A          332 GIRASIYNALNLDQVKTLCEFMKEFQGK  359 (361)
T ss_dssp             SEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence            5999999999999999999999988754

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.48  E-value=6.6e-14  Score=142.63  Aligned_cols=331  Identities=11%  Similarity=0.038  Sum_probs=183.6

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc--------cccccccCCchHHHHHHHHHHhcCcCCCCeEEE-eCC
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF--------YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFF-TNS  170 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~--------~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~-~~s  170 (514)
                      +.|||..+...      -+|+|++|+.+.+.+...        .+. .....+...+..+.|+++++..+.++|+| ++|
T Consensus        27 ~~yl~~agpt~------~p~~V~~a~~~~~~~~~~n~~s~~~~~h~-~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~   99 (386)
T 3qm2_A           27 QVFNFSSGPAM------LPAEVLKLAQQELCDWHGLGTSVMEISHR-GKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGG   99 (386)
T ss_dssp             CCEECCSSSCC------CCHHHHHHHTCC------------------------CCHHHHHHHHHHHTCCTTEEEEEEESC
T ss_pred             cCccccCCCCC------CCHHHHHHHHHHHHhccccCccccccCCC-CHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCC
Confidence            46788654422      589999999877643211        111 01123455677888888885433357888 689


Q ss_pred             hhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCCh
Q 010250          171 GSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETE  249 (514)
Q Consensus       171 GseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  249 (514)
                      ||||++.+++...        ..+++++....+.++.......        +.++    .+..++++ ..+...      
T Consensus       100 ~T~a~n~ai~~l~--------~~gd~v~~~~~~~~~~~~~~~a--------~~~G----~v~~v~~~~~~~G~~------  153 (386)
T 3qm2_A          100 GRGQFAGVPLNLL--------GDKTTADYVDAGYWAASAIKEA--------KKYC----APQIIDAKITVDGKR------  153 (386)
T ss_dssp             TTHHHHHHHHHHC--------TTCCEEEEEESSHHHHHHHHHH--------TTTS----EEEEEECEEEETTEE------
T ss_pred             chHHHHHHHHhcc--------CCCCeEEEEeCCHHHHHHHHHH--------HHhC----CeEEEecCcccCCCC------
Confidence            9999999998653        2235666666556554211000        0011    01111111 000000      


Q ss_pred             hHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcc-cCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecc
Q 010250          250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVI-PPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK  328 (514)
Q Consensus       250 ~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~-~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~  328 (514)
                           .++++++..+.    +++++|.+-.+.+..|++ .|    +++|.     +|+++++|-+|+ +|..  ..-++.
T Consensus       154 -----~~~~~~~~~l~----~~t~lV~~~h~et~tG~~i~p----i~~i~-----~g~~~~vDa~qs-~g~~--pidv~~  212 (386)
T 3qm2_A          154 -----AVKPMREWQLS----DNAAYLHYCPNETIDGIAIDE----TPDFG-----PEVVVTADFSST-ILSA--PLDVSR  212 (386)
T ss_dssp             -----EECCGGGCCCC----TTCSCEEECSEETTTTEECCC----CCCCC-----TTCCEEEECTTT-TTSS--CCCGGG
T ss_pred             -----CCchHHHhhcC----CCCcEEEEECCcCCcCEecCc----hhhhc-----CCCEEEEEcccc-cCCC--CCCccc
Confidence                 00122332222    345567766666677886 65    55553     899999999998 6433  233344


Q ss_pred             cCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCC---C-cccccCCC-CCcHHHHHHHHHHHHHHhhc----c
Q 010250          329 YSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTL---G-SFSHGFTY-SGHPVSCAVAIEALKIYKER----N  399 (514)
Q Consensus       329 ~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~---~-~~~~~~t~-~~~pl~~aaa~aal~~~~~~----~  399 (514)
                      +++  +..+--|.+ |. ..+|++++++++.+.+.+.....   + ....+..+ ..|..+..+..++++.+.+.    +
T Consensus       213 ~~~--~~~s~hK~l-GP-~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~  288 (386)
T 3qm2_A          213 YGV--IYAGAQKNI-GP-AGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAA  288 (386)
T ss_dssp             CSE--EEEETTTTT-CC-TTEEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHH
T ss_pred             cCE--EEEeccccc-CC-CccEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHH
Confidence            432  222333988 44 56899999998765443210000   0 00011222 22334555556777776553    3


Q ss_pred             HHHHHHHHHHHHHhhhhhccCCCcee---EE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--
Q 010250          400 IVEQVNKIAPKFQDGVKAFSDSPIIG---EI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--  473 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l~~~~~~~---~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--  473 (514)
                      +.++.+++.++++++|+++   ++..   +. .....++.|.+++..           ....+...|.++||.+..+.  
T Consensus       289 i~~~~~~l~~~l~~~l~~~---~~~~~~~~~~~rs~~iv~f~~~~~~-----------~~~~~~~~L~~~gI~~~~g~~~  354 (386)
T 3qm2_A          289 MHKINQQKAELLYGVIDNS---DFYRNDVAQANRSRMNVPFQLADNT-----------LDKVFLEESFAAGLHALKGHRV  354 (386)
T ss_dssp             HHHHHHHHHHHHHHHHHTC---SSEECCBCGGGBCSSEEEEEESSGG-----------GHHHHHHHHHHTTEECCBCCTT
T ss_pred             HHHHHHHHHHHHHHHHHHC---CCcccCCCHHHcCceEEEEECCCcc-----------ccHHHHHHHHHCCCEEeCCCCC
Confidence            5678888889999998876   2211   11 112235666665311           12346677889999886541  


Q ss_pred             -CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          474 -DNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       474 -~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                       ..+|+++...+|++|||.+++.|++..++
T Consensus       355 ~~~iRiS~~~~~t~edId~l~~~l~~~~~~  384 (386)
T 3qm2_A          355 VGGMRASIYNAMPIEGVKALTDFMIDFERR  384 (386)
T ss_dssp             TCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred             cCeEEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence             35999998889999999999999987754

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.47  E-value=2.2e-12  Score=142.37  Aligned_cols=318  Identities=12%  Similarity=0.055  Sum_probs=175.1

Q ss_pred             chHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCC
Q 010250          144 KPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQK  223 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~  223 (514)
                      ....++.+.+++.++..  +.++++|++++|+..++....        ..+++||+..++|+..... +..+|.....  
T Consensus       205 g~v~~~ee~la~l~G~d--~~i~~~~Gtt~a~~~~i~al~--------~~GD~Vlv~~~~h~s~~~~-~~~~G~~~v~--  271 (755)
T 2vyc_A          205 GAFGESEKYAARVFGAD--RSWSVVVGTSGSNRTIMQACM--------TDNDVVVVDRNCHKSIEQG-LMLTGAKPVY--  271 (755)
T ss_dssp             HHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHHHC--------CTTCEEEEESSCCHHHHHH-HHHHCCEEEE--
T ss_pred             cHHHHHHHHHHHHhCCC--ceEEECCcHHHHHHHHHHHhc--------CCCCEEEECCCchHHHHHH-HHHcCCEEEE--
Confidence            34567777888887421  234556656788999988763        3346788877776543222 2223321110  


Q ss_pred             CCCCCCcccccCCC-CcccCCCCCCChhHHHHHHHHHHHHHHHHhCCC------c-EEEEEEccccCCCCcccCChhHHH
Q 010250          224 FDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTRLANNLEDLILKEGPE------T-IAAFIAEPVIGAGGVIPPPATYFE  295 (514)
Q Consensus       224 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~------~-~aavivEpv~~~~G~~~p~~~~L~  295 (514)
                                ++.. +.|.. ....+.+.   .+.++|++.+.+....      + .+++++.|  +..|.+.+    ++
T Consensus       272 ----------v~~~~~~~g~-~g~i~~~~---~d~e~le~~i~~~~~~k~~~~~~~klvil~~p--n~~G~v~d----l~  331 (755)
T 2vyc_A          272 ----------MVPSRNRYGI-IGPIYPQE---MQPETLQKKISESPLTKDKAGQKPSYCVVTNC--TYDGVCYN----AK  331 (755)
T ss_dssp             ----------ECCCBCTTSC-BCCCCGGG---GSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS--CTTSEEEC----HH
T ss_pred             ----------EeCCCCcccc-ccccCcCC---CCHHHHHHHHHhCccccccccCCCeEEEEECC--CCCceecC----HH
Confidence                      0000 00000 00000000   0257888888642110      1 25666666  34688876    99


Q ss_pred             HHHHHHHhcCCEEEEechhcCcccccccc--eecccCCCCch------h--chhhhhcCCccc-ceeEEeCHH---H-HH
Q 010250          296 KVQAVVKKYDILFIADEVICAFGRLGTMF--GCDKYSIKPDL------V--SFAKALSSAYMP-IGAILVSPE---V-SE  360 (514)
Q Consensus       296 ~l~~l~~~~gillI~DEv~tG~gr~G~~~--~~~~~gv~pDi------v--~~sK~l~gG~~p-ig~v~~~~~---i-~~  360 (514)
                      +|.++|++||++||+||+|.+.-..+..+  .....+...|+      +  +++|+|+|  .+ .|+++++++   + ..
T Consensus       332 ~I~~ia~~~~~~livDeA~~~~~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g--~~~g~~i~~~~~~~~i~~~  409 (755)
T 2vyc_A          332 EAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA--LSQASYIHVREGRGAINFS  409 (755)
T ss_dssp             HHHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSC--CTTCEEEEEECCBTCCCHH
T ss_pred             HHHHHHHHcCCEEEEECcCchhcccCcccCCcchhcCCcCCccCCCeEEEECccccccC--cCCeeeeeecCcccccCHH
Confidence            99999999999999999997431222111  01112300232      3  56799876  34 456666543   1 12


Q ss_pred             HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhccC---------CCcee--E
Q 010250          361 VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFSD---------SPIIG--E  426 (514)
Q Consensus       361 ~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~---------~~~~~--~  426 (514)
                      .+..      .+....+.+.+...+++..++++.+..+   ++.+++.++.++++++|+++..         .....  .
T Consensus       410 ~~~~------~~~~~~s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~  483 (755)
T 2vyc_A          410 RFNQ------AYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEV  483 (755)
T ss_dssp             HHHH------HHHHTSCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSE
T ss_pred             HHHH------HHHHhCCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchh
Confidence            2221      1111124455677777777788877543   5788889999999999987622         11110  1


Q ss_pred             EEe---------------------------------------ee------eeEEEEEccCCCCCCCCCCccchHHHHHHH
Q 010250          427 IRG---------------------------------------TG------LILGTEFADNKSPNEPFPPEWGIGAYFGAQ  461 (514)
Q Consensus       427 v~g---------------------------------------~g------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  461 (514)
                      +.+                                       .|      ..+.+.......+. .+....-.+..+.+.
T Consensus       484 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G-~~~~~g~~~~~l~~~  562 (755)
T 2vyc_A          484 VTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDG-ELEETGVPAALVTAW  562 (755)
T ss_dssp             EECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTS-SBCSSCCCHHHHHHH
T ss_pred             ccccccccccccccccchhccchhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCC-CccccCCcHHHHHHH
Confidence            100                                       01      12223222110000 000000113567788


Q ss_pred             HHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          462 CEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       462 l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      |.++||.+...+ +.+|+..+...|+++++.++++|.+..+..
T Consensus       563 L~~~gI~~e~~~~~~v~~~~~~g~t~~~~~~l~~al~~~~~~~  605 (755)
T 2vyc_A          563 LGRHGIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHY  605 (755)
T ss_dssp             HHTTTCCCSEECSSEEEEECCTTCCTTTTHHHHHHHHHHHHHH
T ss_pred             HHHCCCEEeecCCCeEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence            888999887544 569999999999999999999998887654

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.40  E-value=4.1e-11  Score=121.69  Aligned_cols=296  Identities=14%  Similarity=0.105  Sum_probs=175.0

Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      ....++.|++|-++.+++..+...    ++++.++||+ ...-|-+.+.++.++|.....-.     |.+.    ++.+ 
T Consensus       134 ~~~~flVnGsTgg~lamilaa~r~----~rpg~d~VIv-pRn~HKSv~kAliL~Gl~Pv~V~-----p~~d----~~~~-  198 (501)
T 3hl2_A          134 VANCFVVPMATGMSLTLCFLTLRH----KRPKAKYIIW-PRIDQKSCFKSMITAGFEPVVIE-----NVLE----GDEL-  198 (501)
T ss_dssp             CCEEEEESSCHHHHHHHHHHHHHH----HCTTCCEEEE-ECCCCHHHHHHHHHTTCEEEEEC-----EEEE----TTEE-
T ss_pred             CCcEEEECcHHHHHHHHHHHHcCc----ccCCCCEEEE-ecchHHHHHHHHHHcCCeEEEEe-----eeec----cccc-
Confidence            345666777776777776665422    1233356666 67788888888777775322110     0000    0000 


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                                  ..+++++|++|++.+++.+++|+..|.+..++...+    +++|.++|++||+++++||+|.+.-...
T Consensus       199 ------------~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~dd----I~eIaeIch~~gIpllVDeAhGah~~~~  262 (501)
T 3hl2_A          199 ------------RTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDR----LEELAVICANYDIPHIVNNAYGVQSSKC  262 (501)
T ss_dssp             ------------EECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCC----HHHHHHHHHHHTCCEEEECTTCTTCHHH
T ss_pred             ------------CCCHHHHHHHHHhcCCCcEEEEEecCCCCCCccccc----HHHHHHHHHHcCCeEEEeCcchhhhhhh
Confidence                        112688999998876678888888776554444444    9999999999999999999986442222


Q ss_pred             ccceecccCC-CCchhchh--hhhcCCcccceeEE--e-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250          322 TMFGCDKYSI-KPDLVSFA--KALSSAYMPIGAIL--V-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY  395 (514)
Q Consensus       322 ~~~~~~~~gv-~pDiv~~s--K~l~gG~~pig~v~--~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~  395 (514)
                      ..+..+.+.. ..|+++.|  |.+-   .|+|+.+  . ++++++.+..        ..-++.+++|..  ..+.++..+
T Consensus       263 ~~lp~sA~~~GrAD~vVqS~HK~ll---vpIGG~ii~~~d~e~l~~~~~--------~yPGr~S~Spsl--dl~~tLL~l  329 (501)
T 3hl2_A          263 MHLIQQGARVGRIDAFVQSLDKNFM---VPVGGAIIAGFNDSFIQEISK--------MYPGRASASPSL--DVLITLLSL  329 (501)
T ss_dssp             HHHHHHHHHHSCCCEEEEEHHHHHC---CCSSCEEEEESCHHHHHHHHH--------TSCSCBCSHHHH--HHHHHHHHH
T ss_pred             hhhHHHHHhcCCCcEEEecccccce---eecCceEEEeCCHHHHHHHHH--------hCCCCCCCcHHH--HHHHHHHHH
Confidence            1111122222 47888877  6442   5555433  3 5677777653        111344555543  233333333


Q ss_pred             hh---ccHHHHHHHHHHHHHhhhhhcc-CCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcE--
Q 010250          396 KE---RNIVEQVNKIAPKFQDGVKAFS-DSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGML--  468 (514)
Q Consensus       396 ~~---~~~~~~~~~~~~~l~~~L~~l~-~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~--  468 (514)
                      -.   .++.++..++.++|+++|+++. .++ .+.+......-+++.+......      .......+...|..++|-  
T Consensus       330 Gr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~------~~~~~t~~gs~Lf~r~vsG~  403 (501)
T 3hl2_A          330 GSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEH------RDKAVTQLGSMLFTRQVSGA  403 (501)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTT------TSCHHHHHHHHHHHTTCCSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEeccccccc------ccccHHHHHHHHHhcCCCcc
Confidence            32   4567888888999999999873 222 1212222223345555432111      111245677888887643  


Q ss_pred             -EEee--------------C--------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250          469 -VRVS--------------G--------DNIMMSPPFIMSPEEVDELISKYGKALKATEERV  507 (514)
Q Consensus       469 -~~~~--------------g--------~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~  507 (514)
                       +.+.              |        ..+-++...-++++|||.++++|++++.++.++.
T Consensus       404 Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~~  465 (501)
T 3hl2_A          404 RVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKER  465 (501)
T ss_dssp             EEECTTCCEEETTEEESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred             eeecCCCceEECCeeecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence             2211              1        3577888888999999999999999998877544

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.40  E-value=2.8e-11  Score=131.60  Aligned_cols=316  Identities=13%  Similarity=0.121  Sum_probs=179.1

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCCh-hHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSG-SEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL  220 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sG-seA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~  220 (514)
                      +.....++++++++++   +.++++|.++| +.||.+++....        ..+++||+.. ..|.+...++.++|....
T Consensus       193 ~~g~i~eaE~~lA~~f---Ga~~a~~v~nGts~An~~ai~al~--------~pGD~VLv~r-~~H~S~~~~l~lsGa~pv  260 (715)
T 3n75_A          193 HSGPHKEAEQYIARVF---NADRSYMVTNGTSTANKIVGMYSA--------PAGSTILIDR-NCHKSLTHLMMMSDVTPI  260 (715)
T ss_dssp             TBTHHHHHHHHHHHHH---TCSEEEEESSHHHHHHHHHHHHHC--------CTTCEEEEES-SCCHHHHHHHHHSCCEEE
T ss_pred             CcHHHHHHHHHHHHHh---CCCCceEECcHHHHHHHHHHHHhC--------CCCCEEEECC-CccHHHHHHHHHcCCEEE
Confidence            4455778899999998   44677777777 589888887663        2345666555 445554444555553221


Q ss_pred             cCCCCCCCCcccccCCCCcccCCCCCC-ChhHHHHHHHHHHHHHHHHhCCCc--EEEEEEccccCCCCcccCChhHHHHH
Q 010250          221 HQKFDLPAPFVLHTDCPHYWRYAHPGE-TEEEYSTRLANNLEDLILKEGPET--IAAFIAEPVIGAGGVIPPPATYFEKV  297 (514)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~li~~~~~~~--~aavivEpv~~~~G~~~p~~~~L~~l  297 (514)
                      .-....           +.|  ..++. +...   .+.++|++++.+....+  .++|+++|  +..|.+.+    +++|
T Consensus       261 ~v~~~~-----------~~~--gi~~~i~~~~---~d~e~Le~~l~~~~~~k~p~~vivt~p--n~~G~v~d----l~~I  318 (715)
T 3n75_A          261 YFRPTR-----------NAY--GILGGIPQSE---FQHATIAKRVKETPNATWPVHAVITNS--TYDGLLYN----TDFI  318 (715)
T ss_dssp             EECCCB-----------CTT--CCBCCCCGGG---GSHHHHHHHHHHSTTCCSCSEEEEESS--CTTSEEEC----HHHH
T ss_pred             EEeccc-----------ccc--ccccCccccc---CCHHHHHHHHhhCcCccCceEEEEECC--CCCCccCC----HHHH
Confidence            100000           000  00000 0000   01578888887532111  25777788  66788887    9999


Q ss_pred             HHHHHhcCCEEEEechhcCcccccccce-ecc--cCCCCchh-----chhhhhcCCcccceeEEeCHHH-HHHhhhccCC
Q 010250          298 QAVVKKYDILFIADEVICAFGRLGTMFG-CDK--YSIKPDLV-----SFAKALSSAYMPIGAILVSPEV-SEVIHSQSNT  368 (514)
Q Consensus       298 ~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~--~gv~pDiv-----~~sK~l~gG~~pig~v~~~~~i-~~~l~~~~~~  368 (514)
                      .++|++++  +|+||+|.+.-..+..+. ...  .+..+|++     +++|+|+|- -..|++.++.++ .+.+..    
T Consensus       319 ~ela~~~~--livDEAH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gl-tqgs~i~v~~~i~~~~~~~----  391 (715)
T 3n75_A          319 KKTLDVKS--IHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAF-SQASMIHVKGDVNEETFNE----  391 (715)
T ss_dssp             HHHCCCSE--EEEECTTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCC-TTCEEEEEESCCCHHHHHH----
T ss_pred             HHHhCcCc--EEEccccccccccCCccccccccccCcCCCEEEEEEecccccccCC-CCeeEEEeCchhhHHHHHH----
Confidence            99998774  799999973212232211 111  12236754     578998861 134666665543 222321    


Q ss_pred             CCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccC------CCcee--EEEe--------
Q 010250          369 LGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSD------SPIIG--EIRG--------  429 (514)
Q Consensus       369 ~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~------~~~~~--~v~g--------  429 (514)
                        .+....|.+.+++.+++..++++.+++   +++.+++.++.++++++|+++..      .....  .+.+        
T Consensus       392 --~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  469 (715)
T 3n75_A          392 --AYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRS  469 (715)
T ss_dssp             --HHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCT
T ss_pred             --HHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCc
Confidence              112335667888888888889988763   45789999999999999987731      00000  0000        


Q ss_pred             -----------ee------eeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEEEeCCCCCCHHHHHH
Q 010250          430 -----------TG------LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMMSPPFIMSPEEVDE  491 (514)
Q Consensus       430 -----------~g------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iRi~p~~~~t~e~id~  491 (514)
                                 .+      +=+.+....-... ..+....-.+..+.+.|.++||.+-.. .+.|-+-.+...|++++++
T Consensus       470 ~~~w~gf~~~~~~~~~~Dp~Kl~i~~~~~~~~-G~~~~~Gi~g~~~~~~L~~~~I~~E~~d~~~vl~l~s~g~~~~~~~~  548 (715)
T 3n75_A          470 DSTWHGFKNIDNEHMYLDPIKVTLLTPGMEKD-GTMSDFGIPASIVAKYLDEHGIVVEKTGPYNLLFLFSIGIDKTKALS  548 (715)
T ss_dssp             TCCTTCCTTCCSSSEEECTTEEEEECSCBCTT-SCBCSSCCCHHHHHHHHHHTTCCCSEEETTEEEEECCTTCCHHHHHH
T ss_pred             ccccccccccccCcccCCCeEEEEEcCCCCCC-CccccCCCcHHHHHHHHHHCCCEEEecCCCcEEEEeCCCCCHHHHHH
Confidence                       00      0011111110000 000000112456778888899988654 4566666667889999999


Q ss_pred             HHHHHHHHHH
Q 010250          492 LISKYGKALK  501 (514)
Q Consensus       492 ~~~~l~~~l~  501 (514)
                      ++++|.+.-+
T Consensus       549 L~~aL~~~~~  558 (715)
T 3n75_A          549 LLRALTDFKR  558 (715)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9988876654

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=99.30  E-value=1.1e-10  Score=119.94  Aligned_cols=308  Identities=12%  Similarity=0.082  Sum_probs=168.0

Q ss_pred             HHHHHHHHHhcCcCCCCeEEEeCChh-HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCC
Q 010250          147 LDLAKELLEMFTASKMAKVFFTNSGS-EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD  225 (514)
Q Consensus       147 ~ela~~L~~~~~~~~~~~v~~~~sGs-eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~  225 (514)
                      ..+.+.+.++++-......++.|++| .++..++..++..    . ++.++||+. ..-|-+...++.+.|.....-.  
T Consensus       101 ~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~----~-~~~~~viv~-r~aHkSv~kAl~l~Gl~p~~v~--  172 (450)
T 3bc8_A          101 NSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHK----R-PKAKYIIWP-RIDQKSCFKSMVTAGFEPVVIE--  172 (450)
T ss_dssp             HHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHH----C-TTCCEEEEE-CCCCHHHHHHHHHTTCEEEEEC--
T ss_pred             HHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchh----h-cCCCEEEEE-CCcHHHHHHHHHHcCCeeEEEE--
Confidence            34555566655433344568888887 5555555555532    1 123456655 4589888888877775322110  


Q ss_pred             CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC
Q 010250          226 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD  305 (514)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g  305 (514)
                         +    .+.++.+             ..+.+.|+++|.+..++.+++|++.|.+...|.+.+    +++|.++|++||
T Consensus       173 ---~----~~~~~~~-------------~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd----l~~Ia~ia~~~g  228 (450)
T 3bc8_A          173 ---N----VLEGDEL-------------RTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR----LEELAVICANYD  228 (450)
T ss_dssp             ---C----EEETTEE-------------ECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC----HHHHHHHHHHHT
T ss_pred             ---e----eecCccC-------------CcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecC----HHHHHHHHHHCC
Confidence               0    0000000             112688999998765457888999887665555655    999999999999


Q ss_pred             CEEEEechhcCcccccccceecccCC-CCchhchh--hhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCc
Q 010250          306 ILFIADEVICAFGRLGTMFGCDKYSI-KPDLVSFA--KALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGH  381 (514)
Q Consensus       306 illI~DEv~tG~gr~G~~~~~~~~gv-~pDiv~~s--K~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~  381 (514)
                      ++|++||+|.+.-+....+..+.+.. ..|.+++|  |.+... ...+++.. +++..+.+..      .+.  .+.+.+
T Consensus       229 i~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~~v~S~HK~l~a~-~~~~~l~~rd~~~~~~~~~------~~~--g~~s~S  299 (450)
T 3bc8_A          229 IPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVP-VGGAIIAGFNEPFIQDISK------MYP--GRASAS  299 (450)
T ss_dssp             CCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHSCC-SSCEEEEESCHHHHHHHHH------HSC--SCBCSH
T ss_pred             CeEEEECCCchhhhhhHhHHHHHhcccCCCEEEECCccCCCch-hccEEEEecCHHHHHHHHH------Hhh--cCCccc
Confidence            99999999975422211111111111 46888776  766543 44566665 5566665542      111  122234


Q ss_pred             HH-HHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhcc---CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccch
Q 010250          382 PV-SCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFS---DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGI  454 (514)
Q Consensus       382 pl-~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~---~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~  454 (514)
                      |. .+.+.   +..+-.+   ++.++..++.+++++.|+++.   ...+.. ....+.-..+.+..-...     .+.+ 
T Consensus       300 psL~l~~~---l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~-~~~~~~~~~~~l~~~~~~-----~~~D-  369 (450)
T 3bc8_A          300 PSLDVLIT---LLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQ-TPHNPISLAMTLKTIDGH-----HDKA-  369 (450)
T ss_dssp             HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCC-CTTCSSEEEEECTTTSSS-----SSCH-
T ss_pred             HHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecC-CccCCCcceeeccccccc-----ccCC-
Confidence            42 22222   2222222   234445677788888888774   322221 100010012222211100     0111 


Q ss_pred             HHHHHHHHHHCCc---EEE-------------e---------eCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          455 GAYFGAQCEKHGM---LVR-------------V---------SGDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       455 ~~~~~~~l~~~Gv---~~~-------------~---------~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      ...+.-.+...|+   -+.             .         ....|-+..+...+++|+++++++|++.+++.++
T Consensus       370 ~tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~  445 (450)
T 3bc8_A          370 VTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRK  445 (450)
T ss_dssp             HHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceeEEEecCCCCccceeeecccccchhHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            2234445555552   221             0         1245777777889999999999999998766544

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=98.72  E-value=6.3e-07  Score=90.80  Aligned_cols=322  Identities=15%  Similarity=0.098  Sum_probs=165.3

Q ss_pred             CCHHHHHHHHHHHh-cCCcc---ccccccC--CchHHHHHH-HHHHhcCcCCCCe-E-EEeCChhHHHHHHHHHHHHHHh
Q 010250          117 SEPRLVAAATAQLN-TLPFY---HSFWNRT--TKPSLDLAK-ELLEMFTASKMAK-V-FFTNSGSEANDTQVKLVWYYNN  187 (514)
Q Consensus       117 ~~p~v~~A~~~~l~-~~~~~---~~~~~~~--~~~~~ela~-~L~~~~~~~~~~~-v-~~~~sGseA~~~Alk~a~~~~~  187 (514)
                      ..|.|++|+-..+. ++.-+   .++|++.  .+..+.|+. +..++|.....+. | +=.-||+.||.++.....    
T Consensus        66 ~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All----  141 (490)
T 3ou5_A           66 CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALL----  141 (490)
T ss_dssp             CCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHC----
T ss_pred             CCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHc----
Confidence            35666666655543 22221   1334333  233444543 4556664221111 1 224589999998887664    


Q ss_pred             hcCCCCccEEEEEecCCccc-cee------eeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHH
Q 010250          188 ALGRPNKKKFIARQKSYHGS-TLI------AASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL  260 (514)
Q Consensus       188 ~~~~~~~~~ii~~~~~yHG~-t~~------~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  260 (514)
                          .+.++|+.++-..-|+ |.+      ..+.++.  +   |..       ++++      ...+    -...|.+.+
T Consensus       142 ----~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~--~---~~~-------~~Y~------vd~~----t~~IDyd~~  195 (490)
T 3ou5_A          142 ----QPHDRIMGLDLPDGGHLTHGYMSDVKRISATSI--F---FES-------MPYK------LNPK----TGLIDYNQL  195 (490)
T ss_dssp             ----C-CCCEECBC----------------------------------------CBC------EETT----TTEECHHHH
T ss_pred             ----CCCCEEEecccCCCCcccccccCCCcccccccc--c---ccc-------cccc------cCCC----CCcccHHHH
Confidence                3356788776544333 111      1112221  0   110       0000      0000    011235888


Q ss_pred             HHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhchh
Q 010250          261 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSFA  339 (514)
Q Consensus       261 e~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~s  339 (514)
                      +++..+..|   ..||+-...-.   ...+   +++++++|++.|++|++|-+|. |+--.| .+. ..+.. .|+||.+
T Consensus       196 ~~~A~~~kP---klIi~G~SaY~---r~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g-~~p-sP~~~-ADvVTtT  263 (490)
T 3ou5_A          196 ALTARLFRP---RLIIAGTSAYA---RLID---YARMREVCDEVKAHLLADMAHISGLVAAK-VIP-SPFKH-ADIVTTT  263 (490)
T ss_dssp             HHHHHHHCC---SEEEECCSSCC---SCCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTT-SSC-CGGGT-CSEEEEE
T ss_pred             HHHHhhcCC---CeEEECCccCc---cccC---HHHHHHHHhhcccEEEechhhhhhhhccc-ccC-Ccccc-ceEEecc
Confidence            888877665   35555433211   2222   8999999999999999999976 542222 111 11222 6888765


Q ss_pred             --hhhcCCcccceeEEeCH---------------HHHHHhhhccCCCCcccccCCCCCcHHHHHHHHH-HHHH-Hhh--c
Q 010250          340 --KALSSAYMPIGAILVSP---------------EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIE-ALKI-YKE--R  398 (514)
Q Consensus       340 --K~l~gG~~pig~v~~~~---------------~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~a-al~~-~~~--~  398 (514)
                        |.|.|  -+-|.+++++               ++.+.+...      ..- +..+++-+-..||.+ ++.. +..  .
T Consensus       264 THKTLrG--PrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~a------VFP-g~qggp~~h~IAAkAVaf~Ea~~p~fk  334 (490)
T 3ou5_A          264 THKTLRG--ARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFA------VFP-SLQGGPHNHAIAAVAVALKQACTPMFR  334 (490)
T ss_dssp             SSSTTCS--CSCEEEEEECSEEEECC--CCEEECCCHHHHHHH------HTT-TTCSSCCHHHHHHHHHHHHHHHSHHHH
T ss_pred             ccccccC--CCceEEEeccccccccccccchhHHHHHHHHHhh------cCc-cccccchHHHHHHHHHHHHHHHhHhHH
Confidence              99998  4667777765               344555431      111 233333222333332 3433 222  3


Q ss_pred             cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee------
Q 010250          399 NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------  472 (514)
Q Consensus       399 ~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------  472 (514)
                      +..+++.++.+.|.+.|.+. .+.++..- -...++.+++.+...          .+......|.+.||.+-..      
T Consensus       335 ~Ya~qVv~NAkaLA~~L~~~-G~~vvsGg-TdnHlvLvDl~~~g~----------tG~~ae~~Le~agItvNkN~iP~D~  402 (490)
T 3ou5_A          335 EYSLQVLKNARAMADALLER-GYSLVSGG-TDNHLVLVDLRPKGL----------DGARAERVLELVSITANKNTCPGDR  402 (490)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT-TCEEGGGS-CSSSEEEEECGGGTC----------CHHHHHHHHHHTTEECEEECCTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHhC-CCeeecCC-CCceEEEEeccccCC----------CHHHHHHHHHHcCcEECCCCCCCCC
Confidence            45777888888888888765 33333211 012244555543221          1455667788889887521      


Q ss_pred             ----CCEEEEeCCC----CCCHHHHHHHHHHHHHHHH
Q 010250          473 ----GDNIMMSPPF----IMSPEEVDELISKYGKALK  501 (514)
Q Consensus       473 ----g~~iRi~p~~----~~t~e~id~~~~~l~~~l~  501 (514)
                          .+.|||.-|.    ...++|++++.+.|.+++.
T Consensus       403 sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~  439 (490)
T 3ou5_A          403 SAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN  439 (490)
T ss_dssp             CSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence                2469998773    4678999999998888764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	514
d2byla1	404	c.67.1.4 (A:36-439) Ornithine aminotransferase {Hu	1e-92
d1z7da1	404	c.67.1.4 (A:7-410) Ornithine aminotransferase {Pla	2e-88
d1sffa_	425	c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GA	9e-88
d1vefa1	387	c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine a	2e-84
d1s0aa_	429	c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxonona	1e-73
d2gsaa_	427	c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase	2e-73
d1zoda1	431	c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {P	3e-67
d1ohwa_	461	c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GA	4e-57
d2v1pa1	467	c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptop	2e-29
d1ax4a_	465	c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanas	2e-26
d1v72a1	345	c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Ps	2e-07
d1m6sa_	343	c.67.1.1 (A:) Low-specificity threonine aldolase {	2e-07
d1fc4a_	401	c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {E	4e-06
d3bc8a1	445	c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase	6e-05
d1svva_	340	c.67.1.1 (A:) Low-specificity threonine aldolase {	5e-04
d1b5pa_	382	c.67.1.1 (A:) Aspartate aminotransferase, AAT {The	0.002

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]} Length = 404

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  286 bits (732), Expect = 1e-92
 Identities = 102/431 (23%), Positives = 177/431 (41%), Gaps = 46/431 (10%)

Query: 75  GWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF 134
           G  +    P+ +E+ +G Y++DV G+KY D L+ +     G   P++V A  +Q++ L  
Sbjct: 16  GAHNAHPLPVALERGKGIYLWDVEGRKYFDFLSSISAVNQGHCHPKIVNALKSQVDKLTL 75

Query: 135 YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPN- 193
               +         L +    +       KV   N+G EA +T  KL   +   +     
Sbjct: 76  TSRAFYNN-----VLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQK 130

Query: 194 -KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY 252
            K K +    ++ G TL A S S  P  +  F    P                       
Sbjct: 131 YKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY---------------- 174

Query: 253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADE 312
                N+L  L        +AAF+ EP+ G  GV+ P   Y   V+ +  ++ +LFIADE
Sbjct: 175 -----NDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADE 229

Query: 313 VICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSF 372
           +     R G     D  +++PD+V   KALS    P+ A+L   ++   I          
Sbjct: 230 IQTGLARTGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIK-------PG 282

Query: 373 SHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGL 432
            H  TY G+P+ C VAI AL++ +E N+ E  +K+    ++ +       ++  +RG GL
Sbjct: 283 EHFSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKLPS-DVVTAVRGKGL 341

Query: 433 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDE 491
           +      + K  +               +   +G+L + +  + I  +PP ++  +E+ E
Sbjct: 342 LNAIVIKETKDWD---------AWKVCLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRE 392

Query: 492 LISKYGKALKA 502
            I    K + +
Sbjct: 393 SIEIINKTILS 403

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]} Length = 404

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

 Score =  275 bits (704), Expect = 2e-88
 Identities = 105/432 (24%), Positives = 178/432 (41%), Gaps = 43/432 (9%)

Query: 75  GWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF 134
           G  + D  P+V+++++G +VYDVN K+Y D L+       G   P ++ A   Q   L  
Sbjct: 14  GAHNYDPIPVVLKRAKGVFVYDVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKNLTI 73

Query: 135 YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNK 194
               +       L + +  L          +  T + +     ++   W Y       N 
Sbjct: 74  CSRAF---FSVPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENM 130

Query: 195 KKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST 254
            K +  + ++ G TL   S S        F   AP                         
Sbjct: 131 AKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPYDDLEA------------- 177

Query: 255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVI 314
                   L  +     + AFI EP+ G  GVI P   Y + V  + KKY++LF+ADEV 
Sbjct: 178 --------LEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQ 229

Query: 315 CAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSH 374
              GR G +     Y++KPD++   KALS  + PI A+L + ++  VI           H
Sbjct: 230 TGLGRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIK-------PGEH 282

Query: 375 GFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGV-KAFSDSPIIGEIRGTGLI 433
           G TY G+P++ ++ +EAL +     + E   K+   F + + +   DS I+ ++RG GL+
Sbjct: 283 GSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLL 342

Query: 434 LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDEL 492
              EF +                    + +++G++ R   D  I ++PP  ++ E++DE 
Sbjct: 343 CAIEFKNELVNV----------LDICLKLKENGLITRDVHDKTIRLTPPLCITKEQLDEC 392

Query: 493 ISKYGKALKATE 504
                K +K  +
Sbjct: 393 TEIIVKTVKFFD 404

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]} Length = 425

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

 Score =  274 bits (701), Expect = 9e-88
 Identities = 103/430 (23%), Positives = 197/430 (45%), Gaps = 30/430 (6%)

Query: 81  VHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWN 140
           +HP+  +++E   V+DV G++YLD   G+     G   P++VAA  AQL  L  +  F  
Sbjct: 21  IHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLS-HTCFQV 79

Query: 141 RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIAR 200
              +P L+L + + +        K     +GSEA +  VK+            +   IA 
Sbjct: 80  LAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATK------RSGTIAF 133

Query: 201 QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNL 260
             +YHG T    +L+G    +          +     H +R  +P             ++
Sbjct: 134 SGAYHGRTHYTLALTGKVNPYSAG-------MGLMPGHVYRALYPCPLHGISEDDAIASI 186

Query: 261 EDLILKEG-PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR 319
             +   +  PE IAA + EPV G GG       + ++++A+  ++ I+ IADEV    GR
Sbjct: 187 HRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGR 246

Query: 320 LGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS 379
            GT+F  ++  + PDL +FAK+++  + P+  +    EV + +            G TY+
Sbjct: 247 TGTLFAMEQMGVAPDLTTFAKSIAGGF-PLAGVTGRAEVMDAVA-------PGGLGGTYA 298

Query: 380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDG-VKAFSDSPIIGEIRGTGLILGTEF 438
           G+P++C  A+E LK++++ N++++ N +  K +DG +      P IG++RG G ++  E 
Sbjct: 299 GNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIEL 358

Query: 439 ADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN---IMMSPPFIMSPEEVDELISK 495
            ++   N+   P+  + A   A+    G+++   G     + +  P  +   ++ + +  
Sbjct: 359 FEDGDHNK---PDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEI 415

Query: 496 YGKALKATEE 505
             +     ++
Sbjct: 416 ISQCFDEAKQ 425

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]} Length = 387

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

 Score =  264 bits (675), Expect = 2e-84
 Identities = 103/420 (24%), Positives = 177/420 (42%), Gaps = 53/420 (12%)

Query: 82  HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNR 141
           H L+I + +G+ V+D  G +Y+D + G     LG   P +V A   Q  TL         
Sbjct: 19  HDLLIVRGQGARVWDAEGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQTL-- 76

Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
              P        L      ++ +VF  NSG+EAN+  +K    +        +KKF+A  
Sbjct: 77  -PTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTG------RKKFVAAM 129

Query: 202 KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE 261
           + + G T+ + S++  P   + F    P V   +   Y                  N++E
Sbjct: 130 RGFSGRTMGSLSVTWEPKYREPF---LPLVEPVEFIPY------------------NDVE 168

Query: 262 DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321
            L  +   E  AA I EPV G GGV P    +    + + ++   L I DE+    GR G
Sbjct: 169 ALK-RAVDEETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTG 227

Query: 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 381
             F  + + I PD+++ AKAL        A++       +            HG T+ G+
Sbjct: 228 KRFAFEHFGIVPDILTLAKALGGGVPLGVAVMREEVARSMPK--------GGHGTTFGGN 279

Query: 382 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADN 441
           P++ A  + A++  +   + E+  ++ P F + ++A   SP I E+RG GL++G E  + 
Sbjct: 280 PLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAI-PSPKIREVRGMGLMVGLELKEK 338

Query: 442 KSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELISKYGKAL 500
            +P            Y     ++H +L   +G   I   PP ++  E+++ ++      L
Sbjct: 339 AAP------------YIARLEKEHRVLALQAGPTVIRFLPPLVIEKEDLERVVEAVRAVL 386

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]} Length = 429

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

 Score =  237 bits (606), Expect = 1e-73
 Identities = 109/433 (25%), Positives = 199/433 (45%), Gaps = 28/433 (6%)

Query: 71  PFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLN 130
           PFT+      V+P  +  +EG  +   +G++ +D ++  W    G + P+L AA  +Q++
Sbjct: 16  PFTSMTSPLPVYP--VVSAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQID 73

Query: 131 TLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALG 190
            +  +  F   T  P+++L ++L+   T   +  VF  +SGS A +  +K+   Y  A  
Sbjct: 74  AMS-HVMFGGITHAPAIELCRKLV-AMTPQPLECVFLADSGSVAVEVAMKMALQYWQAK- 130

Query: 191 RPNKKKFIARQKSYHGSTLIAASLSGLPALHQK-FDLPAPFVLHTDCPHYWRYAHPGETE 249
              +++F+  +  YHG T  A S+          +    P  L    P         E +
Sbjct: 131 GEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERD 190

Query: 250 EEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQAVVKKYDILF 308
                R        ++      IAA I EP++ GAGG+      + ++++ +  +  IL 
Sbjct: 191 MVGFAR--------LMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILL 242

Query: 309 IADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNT 368
           IADE+   FGR G +F C+   I PD++   KAL+   M + A L + EV+E I +    
Sbjct: 243 IADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNGE-- 300

Query: 369 LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR 428
            G F HG T+ G+P++CA A  +L I +  +  +QV  I  + ++ +    D+ ++ ++R
Sbjct: 301 AGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDAEMVADVR 360

Query: 429 GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEE 488
             G I   E     +            A       + G+ +R  G  I + PP+I+ P++
Sbjct: 361 VLGAIGVVETTHPVN-----------MAALQKFFVEQGVWIRPFGKLIYLMPPYIILPQQ 409

Query: 489 VDELISKYGKALK 501
           +  L +   +A++
Sbjct: 410 LQRLTAAVNRAVQ 422

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]} Length = 427

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

 Score =  236 bits (603), Expect = 2e-73
 Identities = 81/432 (18%), Positives = 165/432 (38%), Gaps = 38/432 (8%)

Query: 76  WQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY 135
           ++S    P+V ++ + +Y +DV+G +Y+D +        G + P ++ A    +     +
Sbjct: 28  FKSVGGQPIVFDRVKDAYAWDVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGTSF 87

Query: 136 HSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK 195
            +           LA+ + +      +  V F NSG+EA    ++L+  Y        + 
Sbjct: 88  GAPCA----LENVLAEMVNDAV--PSIEMVRFVNSGTEACMAVLRLMRAYT------GRD 135

Query: 196 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR 255
           K I  +  YHG   +    +G           +P V      +     +           
Sbjct: 136 KIIKFEGCYHGHADMFLVKAGSGVATLGLP-SSPGVPKKTTANTLTTPY----------- 183

Query: 256 LANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEV 313
             N+LE +  +  E P  IA  I EP++G  G I P A + E ++ +  ++D L + DEV
Sbjct: 184 --NDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEV 241

Query: 314 ICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS 373
           +  F         +K+ + PDL +  K +        A     E+ +++       G   
Sbjct: 242 MTGFRI-AYGGVQEKFGVTPDLTTLGKIIGGGLPVG-AYGGKREIMQLVAPA----GPMY 295

Query: 374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA-FSDSPIIGEIRGTGL 432
              T SG+P++    I+ L++ ++    E +++I  +  DG+ A   ++           
Sbjct: 296 QAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSG 355

Query: 433 ILGTEFADNKSPN--EPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVD 490
           + G  F +    N  +    +    + F     + G+ +  S            + E++D
Sbjct: 356 MFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYLAPSQFEAGF-TSLAHTEEDID 414

Query: 491 ELISKYGKALKA 502
             ++     + A
Sbjct: 415 ATLAAARTVMSA 426

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]} Length = 431

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

 Score =  221 bits (562), Expect = 3e-67
 Identities = 102/428 (23%), Positives = 186/428 (43%), Gaps = 26/428 (6%)

Query: 82  HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNR 141
            P++IE+++GS+VYD +G+  LD  +G     LG   P +V+        L   H F   
Sbjct: 23  EPMIIERAKGSFVYDADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLD--HLFSEM 80

Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
            ++P +DLA  L  + T   + +    ++G+E+N+  +++            K + +   
Sbjct: 81  LSRPVVDLATRLANI-TPPGLDRALLLSTGAESNEAAIRMAKLV------TGKYEIVGFA 133

Query: 202 KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE 261
           +S+HG T  AAS +      +K   PA          +                  +   
Sbjct: 134 QSWHGMTGAAASATYSA--GRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAF 191

Query: 262 DLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG 321
           DLI ++    +AAFIAEP++ +GG+I  P  Y   ++   +   +L I DE     GR G
Sbjct: 192 DLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTG 251

Query: 322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH 381
           TMF C +  + PD+++ +K L +       +  +                +    T+   
Sbjct: 252 TMFACQRDGVTPDILTLSKTLGAGLPLAAIVTSAAIEERAHE------LGYLFYTTHVSD 305

Query: 382 PVSCAVAIEALKIYKERNIVEQVNKIAPKFQDG-VKAFSDSPIIGEIRGTGLILGTEFAD 440
           P+  AV +  L + +   +V + N +  + + G +        IG++RG GL+LG E   
Sbjct: 306 PLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVK 365

Query: 441 NKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV-----SGDNIMMSPPFIMSPEEVDELISK 495
           ++   EP     G+GA    +C   G+ + +      G    ++PP  +S +E+D  +S 
Sbjct: 366 DRRTKEPA---DGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAPPLTVSEDEIDLGLSL 422

Query: 496 YGKALKAT 503
            G+A++  
Sbjct: 423 LGQAIERA 430

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]} Length = 461

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  194 bits (494), Expect = 4e-57
 Identities = 73/448 (16%), Positives = 145/448 (32%), Gaps = 53/448 (11%)

Query: 83  PLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT 142
               E+S G+Y+ DV+G + LD  + +    +G S P LV       N   F +      
Sbjct: 36  FCNYEESRGNYLVDVDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGI 95

Query: 143 TKPSLDLAK--ELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPN------- 193
             P   + K  E L       M+++     GS +N+   K ++ +  +  R         
Sbjct: 96  LPPENFVEKLRESLLSVAPKGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEE 155

Query: 194 -------------KKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYW 240
                            ++   ++HG T+   + +   A+H+       + +       +
Sbjct: 156 LETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKY 215

Query: 241 RYAHPGETEEEYSTRLANNLEDL--ILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQ 298
                 +  ++   R    +EDL    ++  +T+A  I EP+   GG       +F K++
Sbjct: 216 PLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLR 275

Query: 299 AVVKKYDILFIADEVICAFGRLG--TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSP 356
            + +K+   F+ DEV    G  G              D+++F+K + +            
Sbjct: 276 DISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTGGFF-------- 327

Query: 357 EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVK 416
                   +      +    T+ G P    +  E + I K  +++            G+ 
Sbjct: 328 -----HKEEFRPNAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLL 382

Query: 417 AFSD--SPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGD 474
                    I  +RG G     +  D             I     +     G+++   GD
Sbjct: 383 DLQARYPQFISRVRGRGTFCSFDTPDES-----------IRNKLISIARNKGVMLGGCGD 431

Query: 475 N-IMMSPPFIMSPEEVDELISKYGKALK 501
             I   P  +         ++ +   L 
Sbjct: 432 KSIRFRPTLVFRDHHAHLFLNIFSDILA 459

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]} Length = 467

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

 Score =  118 bits (297), Expect = 2e-29
 Identities = 55/393 (13%), Positives = 116/393 (29%), Gaps = 53/393 (13%)

Query: 149 LAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGST 208
           LA+ +  +F          T+ G  A    + ++          ++ K +A    +  +T
Sbjct: 79  LAESVKNIF---GYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTT 135

Query: 209 LIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG 268
              + ++G        ++       T   + ++                  LE  I + G
Sbjct: 136 QGHSQINGCTVR----NVYIKEAFDTGVRYDFKGNFD-----------LEGLERGIEEVG 180

Query: 269 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA------FGRLGT 322
           P  +   +A     + G  P      + + ++ KKYDI  + D    A        R   
Sbjct: 181 PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAE 240

Query: 323 MFGCDKYSIKPDLVSFAKALSSA-----YMPIGAILV--SPEVSEVIHSQSNTLGSFSHG 375
                   I  +   +A  L+ +      +P+G +L        +V              
Sbjct: 241 YKDWTIEQITRETYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVVQEGF 300

Query: 376 FTYSGHPVSCAVAIEA-LKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLIL 434
            TY G        +   L      + +           DG++      +  +  G    +
Sbjct: 301 PTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI--GVVCQQAGGHAAFV 358

Query: 435 GTEFADNKSPNEPFPPEWG--------------IGAYFGAQCEKHGMLVRVSGDNIMMSP 480
                    P + FP +                IG++   +  K G  +    + + ++ 
Sbjct: 359 DAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTI 418

Query: 481 P-FIMSPEEVDELISKYGKALKATEERVKELKS 512
           P    +   +D +I    +A K  +E    +K 
Sbjct: 419 PRATYTQTHMDFII----EAFKHVKENAANIKG 447

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]} Length = 465

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

 Score =  109 bits (273), Expect = 2e-26
 Identities = 53/394 (13%), Positives = 119/394 (30%), Gaps = 57/394 (14%)

Query: 149 LAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGST 208
           L  +  E+F       +   + G  A +    ++  Y    G+     FI+    +H  T
Sbjct: 80  LKDKAKELF---NYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISN---FHFDT 133

Query: 209 LIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG 268
             A             ++       ++    W+                  L++ I + G
Sbjct: 134 TAAHVELNGCKAI---NIVTEKAFDSETYDDWKGDFD-----------IKKLKENIAQHG 179

Query: 269 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA------FGRLGT 322
            + I A ++     + G  P   +  ++V  + K++ I  + D             R   
Sbjct: 180 ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPK 239

Query: 323 MFGCDKYSIKPDLVSFAKALSSA-----YMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT 377
                   +  D+  +A AL+ +      + IG ++   +  E+               T
Sbjct: 240 YKNATIKEVIFDMYKYADALTMSAKKDPLLNIGGLVAIRDNEEIFTLARQRCVPMEGFVT 299

Query: 378 YSGHPVSCAVAI-----EALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGL 432
           Y G       A+     E  +       + QV  +  + ++        PI     G  +
Sbjct: 300 YGGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLREAGI-----PIQYPTGGHAV 354

Query: 433 ILGTEFADNKSPNEPFPPEWG--------------IGAYFGAQCEKHGMLVRVSGDNIMM 478
            +  +    + P + FP +                IG++   +    G       + + +
Sbjct: 355 FVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRL 414

Query: 479 S-PPFIMSPEEVDELISKYGKALKATEERVKELK 511
           +    + + + +D +       LK     +K L+
Sbjct: 415 TIARRVYTNDHMDYIADAL-IGLKEKFATLKGLE 447

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]} Length = 345

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

 Score = 50.6 bits (119), Expect = 2e-07
 Identities = 40/389 (10%), Positives = 85/389 (21%), Gaps = 61/389 (15%)

Query: 115 GGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEA 174
            G+ P +  A     +      +    T + +  + ++  E+F   +  +VF   +G+ A
Sbjct: 13  AGASPEVAQALVKHSSG----QAGPYGTDELTAQVKRKFCEIF--ERDVEVFLVPTGTAA 66

Query: 175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHT 234
           N          +                  +         S    L       A   +  
Sbjct: 67  N------ALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPAAKLDIVR 120

Query: 235 DCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYF 294
                                               T                       
Sbjct: 121 LRERTREKVGD-----------------------VHTTQPACVSITQATEVGSIYTLDEI 157

Query: 295 EKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILV 354
           E +  V K   +    D    A   +       + + K  + + +   +   +       
Sbjct: 158 EAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLA----- 212

Query: 355 SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDG 414
             E   + ++   T  S+              ++ +      +   +    K     Q  
Sbjct: 213 -AEAIVLFNTSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRL 271

Query: 415 VKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS- 472
            +       +  + GT   IL                             K G       
Sbjct: 272 AQGLEGLGGVEVLGGTEANILFCRLDSAMI----------------DALLKAGFGFYHDR 315

Query: 473 -GDN-IMMSPPFIMSPEEVDELISKYGKA 499
            G N +     F  + E+VD L+++   A
Sbjct: 316 WGPNVVRFVTSFATTAEDVDHLLNQVRLA 344

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]} Length = 343

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

 Score = 50.5 bits (119), Expect = 2e-07
 Identities = 40/354 (11%), Positives = 89/354 (25%), Gaps = 53/354 (14%)

Query: 149 LAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGST 208
           L +   E F         F  SG+  N   +                       +  G  
Sbjct: 39  LERLAAETF---GKEAALFVPSGTMGNQVSIMAH--------------------TQRGDE 75

Query: 209 LIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG 268
           +I  + S +             V+    P       P +  +    R  +          
Sbjct: 76  VILEADSHIFWYEVGAMAVLSGVMPHPVPGKNGAMDPDDVRKAIRPRNIHFPR------- 128

Query: 269 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK 328
               +    E      G    P    +++  + K++ I    D        + +     +
Sbjct: 129 ---TSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKE 185

Query: 329 YSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVA 388
           Y+   D V F  +          ++   +  E                           A
Sbjct: 186 YAGYADSVMFCLSKGLCAPVGSVVVGDRDFIERAR-------KARKMLGGGMRQAGVLAA 238

Query: 389 IEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPF 448
              + + K  + +++ ++ A      +K    S    +++   +IL              
Sbjct: 239 AGIIALTKMVDRLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILR------------T 286

Query: 449 PPEWGIGAYFGAQCEKHGMLVRVSGDN-IMMSPPFIMSPEEVDELISKYGKALK 501
                    F       G+L     D  I +     +S  +++E ++ + K  +
Sbjct: 287 DNLKVNAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEKLFR 340

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]} Length = 401

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

 Score = 46.7 bits (110), Expect = 4e-06
 Identities = 64/441 (14%), Positives = 130/441 (29%), Gaps = 99/441 (22%)

Query: 85  VIEKSEGSYVYDVNGKKYLDSLAGLWCTA--LG-GSEPRLVAAATAQLNTLPFYHSFWNR 141
           +I  ++ + +   +G   ++     +C    LG  + P L+AAA A +++  F  +    
Sbjct: 30  IITSAQQADITVADGSHVIN-----FCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRF 84

Query: 142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ 201
                                             D+  +L               F+  +
Sbjct: 85  I-----------------------------CGTQDSHKELEQKLA---------AFLGME 106

Query: 202 KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE 261
            +   S+   A+      L    D      L+             +     +  +     
Sbjct: 107 DAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQELEA 166

Query: 262 DLI-LKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADE-----VIC 315
            L   +E          + V    GVI       + V  +  KYD L + D+      + 
Sbjct: 167 RLKEAREAGARHVLIATDGVFSMDGVIA----NLKGVCDLADKYDALVMVDDSHAVGFVG 222

Query: 316 AFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHG 375
             GR G+   CD    + D+++     +      G      EV E +  +S       + 
Sbjct: 223 ENGR-GSHEYCDVMG-RVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSR-----PYL 275

Query: 376 FTYSGHP-VSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF------SDSPIIGEIR 428
           F+ S  P +  A       +     + +++   A +F++ + A       +D  II    
Sbjct: 276 FSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAGFTLAGADHAII---- 331

Query: 429 GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--------DNIMMSP 480
              ++LG    D     +           F  + +K G+ V              I    
Sbjct: 332 --PVMLG----DAVVAQK-----------FARELQKEGIYVTGFFYPVVPKGQARIRTQM 374

Query: 481 PFIMSPEEVDELISKYGKALK 501
               +PE++   +  + +  K
Sbjct: 375 SAAHTPEQITRAVEAFTRIGK 395

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]} Length = 445

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.0 bits (100), Expect = 6e-05
 Identities = 49/379 (12%), Positives = 86/379 (22%), Gaps = 54/379 (14%)

Query: 148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGS 207
            L   ++++     +A  F     +  + T   L   +     RP  K  I   +    S
Sbjct: 98  SLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHK----RPKAKYIIW-PRIDQKS 152

Query: 208 TLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE 267
              +   +G   +  +        L TD                        +E  I + 
Sbjct: 153 CFKSMVTAGFEPVVIENV-LEGDELRTDLKA---------------------VEAKIQEL 190

Query: 268 GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT---MF 324
           GPE I    +     A  V        E++  +   YDI  + +                
Sbjct: 191 GPEHILCLHSTTACFAPRVPDR----LEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQ 246

Query: 325 GCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY------ 378
           G     I   + S  K              +    + I        S S           
Sbjct: 247 GARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLS 306

Query: 379 ---SGHPVSCAVAIEALKIYKER------NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG 429
              SG+        E       +         E++ +                   +   
Sbjct: 307 LGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAV 366

Query: 430 TGLI--LGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPE 487
           T L   L T              +   G  F                 +  +    M  +
Sbjct: 367 TQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADN---YPCAYLNAAAAIGMKMQ 423

Query: 488 EVDELISKYGKALKATEER 506
           +VD  I +  K L    + 
Sbjct: 424 DVDLFIKRLDKCLNIVRKE 442

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]} Length = 340

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

 Score = 39.9 bits (91), Expect = 5e-04
 Identities = 41/384 (10%), Positives = 83/384 (21%), Gaps = 60/384 (15%)

Query: 114 LGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE 173
             G  P+++                           A  L+        A V F + G++
Sbjct: 9   SVGMHPKILDLMARDNM-----TQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQ 63

Query: 174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLH 233
            N     L      A                                     L       
Sbjct: 64  TNLIACSLALRPWEA--------------------------------VIATQLGHISTHE 91

Query: 234 TDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATY 293
           T       +        +   R+A+    L        +   +                 
Sbjct: 92  TGAIEATGHKVVTAPCPDGKLRVADIESALHENRSEHMVIPKLVYISNTTEVGTQYTKQE 151

Query: 294 FEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAIL 353
            E + A  K++ +    D    A      +       I      F    + A    G  L
Sbjct: 152 LEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFGEAL 211

Query: 354 VSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQD 413
           +    +   +++         G   +   +        +K      +    NK+A   + 
Sbjct: 212 IILNDALKPNARHLI---KQRGALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKA 268

Query: 414 GVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFP--PEWGIGAYFGAQCEKHGMLVRV 471
           G++                  G   A   + N+ FP      I A      + + +    
Sbjct: 269 GLE----------------ACGIRLAWPSASNQLFPILENTMI-AELNNDFDMYTVEPLK 311

Query: 472 SGDN-IMMSPPFIMSPEEVDELIS 494
            G   + +   +    +E    + 
Sbjct: 312 DGTCIMRLCTSWATEEKECHRFVE 335

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]} Length = 382

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

 Score = 37.8 bits (87), Expect = 0.002
 Identities = 28/162 (17%), Positives = 46/162 (28%), Gaps = 6/162 (3%)

Query: 227 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGV 286
           P                   ET  E       + E +     P T A  +  P    G V
Sbjct: 123 PYWVSYPEMVRFAGGVVVEVETLPEEGFVP--DPERVRRAITPRTKALVVNSPNNPTGAV 180

Query: 287 IPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV--SFAKALSS 344
            P      E +  +  ++D   ++DE+       G  F   + + +  L     AKA + 
Sbjct: 181 YPKE--VLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAM 238

Query: 345 AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCA 386
               IG      EV + + S S    +            +  
Sbjct: 239 TGWRIGYACGPKEVIKAMASVSRQSTTSPDTIAQWATLEALT 280

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	514
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	100.0
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	100.0
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	100.0
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	100.0
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	100.0
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	100.0
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	100.0
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	100.0
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	100.0
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	100.0
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	100.0
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.93
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.91
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	99.9
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.9
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	99.89
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.89
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	99.87
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	99.86
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	99.86
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.86
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	99.86
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	99.86
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	99.85
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	99.85
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	99.84
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	99.84
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	99.83
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	99.82
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	99.82
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	99.81
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.81
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.79
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.79
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	99.78
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.78
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	99.78
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.76
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.76
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.75
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.75
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	99.72
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.71
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.71
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.7
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	99.68
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.68
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.68
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	99.67
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.67
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	99.64
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	99.63
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.62
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	99.6
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.59
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	99.59
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	99.58
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	99.58
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.58
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.54
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	99.49
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	99.47
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.44
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	99.44
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.31
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.26
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.25
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.25
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.22
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.19
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.18
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.18
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	99.14
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.12
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.11
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	99.09
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.04
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.02
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	99.02
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.01
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	99.01
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	98.95
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	98.93
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	98.86
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	98.7
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	98.64

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.3e-75  Score=601.59  Aligned_cols=415  Identities=25%  Similarity=0.422  Sum_probs=344.1

Q ss_pred             cccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC
Q 010250           54 QKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP  133 (514)
Q Consensus        54 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~  133 (514)
                      ++..++.++..+..+..|          +|+++++|+|+|+||+|||+||||.+++|+++|||+||+|++|+.+|++++.
T Consensus         4 ~~l~~r~~~~~~~g~~~~----------~P~~~~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~   73 (425)
T d1sffa_           4 KELMQRRSQAIPRGVGQI----------HPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLS   73 (425)
T ss_dssp             HHHHHHHHHHSCTTBCCS----------EEEEEEEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHTTTCS
T ss_pred             HHHHHHHHHhcCCCCCCC----------CCceEEEEecCEEEeCCCCEEEEcCcCHHhhcccCCcHHHHHHHHHHHhhcC
Confidence            344444555555554333          7899999999999999999999999999999999999999999999999876


Q ss_pred             ccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee
Q 010250          134 FYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS  213 (514)
Q Consensus       134 ~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~  213 (514)
                      +.+. ...+++...+++++|.+.++....++++|++||+||++.|+|+|+.|      ++|.+||.++++|||++.++++
T Consensus        74 ~~~~-~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~Alk~ar~~------t~r~~ii~~~~~yHG~t~~~~~  146 (425)
T d1sffa_          74 HTCF-QVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAA------TKRSGTIAFSGAYHGRTHYTLA  146 (425)
T ss_dssp             CCCT-TTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHH------HTCCEEEEETTCCCCSSHHHHH
T ss_pred             Cccc-ccccCcHHHHHHHHHHhhhhhcccceeeeeccccchhhhHHHHhhhh------hcccceEeecCCCcCccccchh
Confidence            5432 23457888999999999986555789999999999999999999988      4688999999999999999999


Q ss_pred             cCCCccccCCCCCCCCcccc-cCCCCcccCCCCCCChhHHHHHHHHHHHHH-HHHhCCCcEEEEEEccccCCCCcccCCh
Q 010250          214 LSGLPALHQKFDLPAPFVLH-TDCPHYWRYAHPGETEEEYSTRLANNLEDL-ILKEGPETIAAFIAEPVIGAGGVIPPPA  291 (514)
Q Consensus       214 ~s~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~le~l-i~~~~~~~~aavivEpv~~~~G~~~p~~  291 (514)
                      +++.+.....+....+.... .+.|....        +..........+++ ......+++++||+||+++++|+++|++
T Consensus       147 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~vaavi~EPi~g~~G~~~~~~  218 (425)
T d1sffa_         147 LTGKVNPYSAGMGLMPGHVYRALYPCPLH--------GISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSP  218 (425)
T ss_dssp             HSSCCTTTTTTSCCCCSSEEEECCCBGGG--------TBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTTTTSCBCCH
T ss_pred             hcCCCCcccCCcccccCCccccCCccccc--------cccchhhHHHHHHHHHhcccccceEEEEecCccCCCCcccCCH
Confidence            99876655544433332221 11221111        11111112223332 3334457899999999999999999999


Q ss_pred             hHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCc
Q 010250          292 TYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGS  371 (514)
Q Consensus       292 ~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~  371 (514)
                      +||++|+++|++||++||+|||+|||||+|.+|+++++|+.|||+|+||+|+|| +|+|++++++++++.+.+       
T Consensus       219 ~~l~~l~~lc~~~gillI~DEV~tG~gR~g~~~a~~~~gv~PDi~~~gK~l~gG-~P~~av~~~~~i~~~~~~-------  290 (425)
T d1sffa_         219 AFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGG-FPLAGVTGRAEVMDAVAP-------  290 (425)
T ss_dssp             HHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEEEECGGGGTS-SCCEEEEEEHHHHTTSCT-------
T ss_pred             HHHHHHHHHHHHcCceEEeccccccCCCcchhhHHHhcCCCccceecccccCCC-cceEEEEEcHHHHHhhCC-------
Confidence            999999999999999999999999999999999999999999999999999999 699999999999998863       


Q ss_pred             ccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCC
Q 010250          372 FSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPP  450 (514)
Q Consensus       372 ~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~  450 (514)
                      ..+++||++||++|++|+++|++++++++.+++++++++++++|+++ .+++.+..++|.|++++++|.++.....   .
T Consensus       291 ~~~~~T~~gnpl~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~v~~vrg~Gl~~~i~f~~~~~~~~---~  367 (425)
T d1sffa_         291 GGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNK---P  367 (425)
T ss_dssp             TSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEETTEEEEEEBGGGCTTS---B
T ss_pred             CCCCCCCCcCHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhhhhhhhHhhCCceEEEEccccEEEEEEeccCccCC---c
Confidence            36889999999999999999999999999999999999999999987 6789999999999999999976543221   2


Q ss_pred             ccchHHHHHHHHHHCCcEEEeeC---CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          451 EWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       451 ~~~~~~~~~~~l~~~Gv~~~~~g---~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      +......+.+.|+++|+++.+.+   +.|||+||+++|++|||+++++|++++++++
T Consensus       368 ~~~~~~~~~~~l~~~Gvl~~~~g~~~n~i~~~PpL~it~~eid~~l~~l~~al~eik  424 (425)
T d1sffa_         368 DAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCFDEAK  424 (425)
T ss_dssp             CHHHHHHHHHHHHHTTEECEEESTTSCEEEECCCTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred             cHHHHHHHHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence            23456778899999999988764   6799999999999999999999999998764

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-74  Score=588.19  Aligned_cols=397  Identities=27%  Similarity=0.439  Sum_probs=344.9

Q ss_pred             cccccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhc
Q 010250           52 SSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNT  131 (514)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~  131 (514)
                      .+++..+...+|.+|++ +|          +|++|++|+|+|+||+|||+||||.+++|+++|||+||+|++|+.+|+++
T Consensus         4 ~~~~~~~~~~~~~~~~~-~p----------~P~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Av~~q~~~   72 (404)
T d2byla1           4 TSDDIFEREYKYGAHNA-HP----------LPVALERGKGIYLWDVEGRKYFDFLSSISAVNQGHCHPKIVNALKSQVDK   72 (404)
T ss_dssp             CHHHHHHHHHHHBCSCC-CC----------EEEEEEEEEBTEEEETTCCEEEESSHHHHTCTTCBTCHHHHHHHHHHHTT
T ss_pred             cHHHHHHHHHHhccCCC-CC----------CCceEEEeecCEEEECCCCEEEEecCCHHHHhhcCCCHHHHHHHHHHHhh
Confidence            34566777888888875 56          78999999999999999999999999999999999999999999999998


Q ss_pred             CCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhc--CCCCccEEEEEecCCcccce
Q 010250          132 LPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL--GRPNKKKFIARQKSYHGSTL  209 (514)
Q Consensus       132 ~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~--~~~~~~~ii~~~~~yHG~t~  209 (514)
                      +.+.+..  ..+....++++++.++.   +.++++|++||+||++.|+|+||.++...  ...++.+++.++++|||.+.
T Consensus        73 ~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~v~~~~sGseA~e~Aik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~  147 (404)
T d2byla1          73 LTLTSRA--FYNNVLGEYEEYITKLF---NYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTL  147 (404)
T ss_dssp             CCCCCTT--EEESSHHHHHHHHHHHH---TCSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSH
T ss_pred             CCCcccc--cccchHHHHHHhhhhcc---cccccccccCccccchhHHHHHHHHhhhccccccccccccccCCCcccccc
Confidence            7654322  23455667888888775   56899999999999999999999876443  34567899999999999999


Q ss_pred             eeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccC
Q 010250          210 IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPP  289 (514)
Q Consensus       210 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p  289 (514)
                      ++++.++.+..+..+.+..+.+..+++.+                  ++.+++.+.   .+++|+||+||+++++|+++|
T Consensus       148 ~~~~~~~~~~~~~~~~p~~~~~~~~p~~d------------------~~~l~~~l~---~~~iAaviiEPi~g~~G~~~~  206 (404)
T d2byla1         148 SAISSSTDPTSYDGFGPFMPGFDIIPYND------------------LPALERALQ---DPNVAAFMVEPIQGEAGVVVP  206 (404)
T ss_dssp             HHHTTCCCHHHHTTSCSCCTTEEEECTTC------------------HHHHHHHHT---STTEEEEEECSSBTTTTSBCC
T ss_pred             ceeccCCCcccccCCCCCCCCeeEecccC------------------HHHHHHhcC---CCCeEEEEECCccCCCCCccC
Confidence            99999998888777765555544444321                  466777664   468999999999999999999


Q ss_pred             ChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCC
Q 010250          290 PATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTL  369 (514)
Q Consensus       290 ~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~  369 (514)
                      +++||++|+++|++||++||+|||+|||||+|++|+++++|++|||+|+||+|+||++|+|++++++++++.+.      
T Consensus       207 ~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G~~~a~~~~gv~PDi~~~gK~l~gG~~p~~av~~~~~i~~~~~------  280 (404)
T d2byla1         207 DPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIVLLGKALSGGLYPVSAVLCDDDIMLTIK------  280 (404)
T ss_dssp             CTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTSC------
T ss_pred             CHHHHHHHHHHHHhcCeEEEeeccccccccccccchhhhcCCCCCEEEECchhhCCCccceeeeechhhhhccC------
Confidence            99999999999999999999999999999999999999999999999999999999899999999999998875      


Q ss_pred             CcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCC
Q 010250          370 GSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFP  449 (514)
Q Consensus       370 ~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~  449 (514)
                       +..|++||++||++|++|+++|++++++++.++++++++++++.|+++ ..+.+.++||.|+|.++++.+....     
T Consensus       281 -~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l-~~~~i~~vRg~Gl~~~i~~~~~~~~-----  353 (404)
T d2byla1         281 -PGEHFSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKL-PSDVVTAVRGKGLLNAIVIKETKDW-----  353 (404)
T ss_dssp             -TTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTS-CTTTEEEEEEETTEEEEEECCCSSC-----
T ss_pred             -CCCCCcCCCcCHHHHHHHHHHHHHHHhcCchhhhhHhhHHHHHHHHhh-ccccceeeeecccEEEEEEecCCch-----
Confidence             347889999999999999999999999999999999999999999998 4468899999999999999764422     


Q ss_pred             CccchHHHHHHHHHHCCcEEEe-eCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          450 PEWGIGAYFGAQCEKHGMLVRV-SGDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       450 ~~~~~~~~~~~~l~~~Gv~~~~-~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                          ....+..+|+++|+++.+ .++.|||+||+++|++|||+++++|+++|.+
T Consensus       354 ----~~~~~~~~l~~~Gvl~~~~~~~~i~l~PpL~it~~~id~~~~~l~~al~~  403 (404)
T d2byla1         354 ----DAWKVCLRLRDNGLLAKPTHGDIIRFAPPLVIKEDELRESIEIINKTILS  403 (404)
T ss_dssp             ----CHHHHHHHHHHTTEECEEEETTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             ----hHHHHHHHHHhCCeEEecCCCCEEEEECCcCCCHHHHHHHHHHHHHHHHc
Confidence                145678899999999987 4678999999999999999999999999864

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.5e-73  Score=585.93  Aligned_cols=414  Identities=27%  Similarity=0.466  Sum_probs=346.2

Q ss_pred             ccCccccCCccccccCCCCCCe-EEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcccccccc
Q 010250           63 FKGHDMLAPFTAGWQSTDVHPL-VIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNR  141 (514)
Q Consensus        63 ~~~~~~~~p~~~~~~~~~~~p~-~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~  141 (514)
                      |..+.+|+||++...   ++|+ .+++|+|+|+||.|||+||||.+|+|+++|||+||+|++|+.+|++++.+.. +...
T Consensus         8 ~d~~h~~~p~~~~~~---~~p~~~i~~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~-~~~~   83 (429)
T d1s0aa_           8 FDQRHILHPFTSMTS---PLPVYPVVSAEGCELILSDGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVM-FGGI   83 (429)
T ss_dssp             HHHHHBCCTTCCSSS---CCCCEEEEEEEBTEEEETTSCEEEESSTTTTTCTTCBSCHHHHHHHHHHHHHCSCCC-CSSE
T ss_pred             HHHHhcCCCcccCCC---CCCCcceEEeECCEEEECCCCEEEECcccHHHHhhcCCcHHHHHHHHHHHHhcCCcc-cCCc
Confidence            344457899876533   3555 4899999999999999999999999999999999999999999999876532 2234


Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcccc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH  221 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~  221 (514)
                      +++...++++++.+..+ .++++|+|++||+||++.|+|++|+|+.+++. ++.+||.++++|||+|.+++++++.....
T Consensus        84 ~~~~~~~l~~~l~~~~~-~~~~~v~f~~sGseA~e~A~k~ar~~~~~~g~-~~~~ii~~~~~yHG~t~~a~~~t~~~~~~  161 (429)
T d1s0aa_          84 THAPAIELCRKLVAMTP-QPLECVFLADSGSVAVEVAMKMALQYWQAKGE-ARQRFLTFRNGYHGDTFGAMSVCDPDNSM  161 (429)
T ss_dssp             ECHHHHHHHHHHHHHSC-TTCCEEEEESSHHHHHHHHHHHHHHHHHHHTC-CCCEEEEETTCCCCSSHHHHTTSCTTTTT
T ss_pred             cchHHHHHHHHHHhhhc-cCcceeeeccccccchhhhhhhhhheeecccc-cccEEEEecCCccccchhhhhhcCCcccc
Confidence            66778899999999874 46899999999999999999999999887774 45699999999999999999998865544


Q ss_pred             CCCC-CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcccc-CCCCcccCChhHHHHHHH
Q 010250          222 QKFD-LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI-GAGGVIPPPATYFEKVQA  299 (514)
Q Consensus       222 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~-~~~G~~~p~~~~L~~l~~  299 (514)
                      ..+. .+.+.....+.+.....  ...+.     .+.+++++.+.+. ++++++||+||++ ++||+++||++||++|++
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~~~-~~~iaavivEPi~~~~gg~~~~~~~fl~~lr~  233 (429)
T d1s0aa_         162 HSLWKGYLPENLFAPAPQSRMD--GEWDE-----RDMVGFARLMAAH-RHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRK  233 (429)
T ss_dssp             GGGGTTTSCCCEEECCCCSBC---CCCCG-----GGGHHHHHHHHHH-TTTEEEEEECSSEECTTTCEEBCTHHHHHHHH
T ss_pred             ccccCccccccccccccccccc--cccch-----hhhhhhhhhhhhc-CCccceeeecceeccCCCccCCCHHHHHHHHH
Confidence            4332 22222222222221111  11111     1135555555544 4789999999997 778888999999999999


Q ss_pred             HHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCC
Q 010250          300 VVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS  379 (514)
Q Consensus       300 l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~  379 (514)
                      +|++||++||+|||||||||+|++|+++++|+.|||+|+||+|+||++|+|++++++++++.+...  ..+.+.|++||+
T Consensus       234 lc~~~gillI~DEV~tGfGRtG~~~~~~~~~v~PDi~~~gK~l~gG~~p~~av~~~~~i~~~~~~~--~~~~~~~~~T~~  311 (429)
T d1s0aa_         234 ICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLGKALTGGTMTLSATLTTREVAETISNG--EAGCFMHGPTFM  311 (429)
T ss_dssp             HHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTSSSCCEEEEECHHHHHHHHTS--TTSSCSCCCTTT
T ss_pred             HHHHcCcceehhhccccccccccccccccceecccccccccccccccccccchhhHHHHHhccCCC--CCcceeecCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999988753  234678999999


Q ss_pred             CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHH
Q 010250          380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFG  459 (514)
Q Consensus       380 ~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~  459 (514)
                      +||++|++++++|++++++++.+++++++++|+++|+++.+.+.+.++||.|+|.++++..+..           ...+.
T Consensus       312 gnp~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~~e~~~~~~-----------~~~~~  380 (429)
T d1s0aa_         312 GNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDAEMVADVRVLGAIGVVETTHPVN-----------MAALQ  380 (429)
T ss_dssp             TCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGGCTTEEEEEEETTEEEEEESSCBC-----------HHHHH
T ss_pred             CCcccchhhhccccccccccccchhhHHHHHHHHHHHHhccCCceEEEeecccEEEEEecCccc-----------HHHHH
Confidence            9999999999999999999999999999999999999997788999999999999999975431           45688


Q ss_pred             HHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          460 AQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       460 ~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ..|+++|+++.+.++.|||+||+++|++|||+++++|+++++++
T Consensus       381 ~~~~~~Gl~~~~~g~~i~~~Ppl~it~~eid~~~~~l~~al~e~  424 (429)
T d1s0aa_         381 KFFVEQGVWIRPFGKLIYLMPPYIILPQQLQRLTAAVNRAVQDE  424 (429)
T ss_dssp             HHHHHTTEECCCBTTEEEECCCTTCCHHHHHHHHHHHHHHTSSG
T ss_pred             HHHHHCCcEEEecCCEEEEeCCcCCCHHHHHHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999999999998653

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=100.00  E-value=6.9e-73  Score=587.57  Aligned_cols=402  Identities=26%  Similarity=0.480  Sum_probs=340.5

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|++|++|+|+||||.|||+||||.+|+|+++|||+||+|.+|+.+|++++.+.+.  ..++++..+++++|++..+ .+
T Consensus        23 ~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~la~~L~~~~~-~~   99 (431)
T d1zoda1          23 EPMIIERAKGSFVYDADGRAILDFTSGQMSAVLGHCHPEIVSVIGEYAGKLDHLFS--EMLSRPVVDLATRLANITP-PG   99 (431)
T ss_dssp             CSSCCCEEEBTEEECTTCCEEEETTHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCT--TCCCHHHHHHHHHHHHHSC-TT
T ss_pred             CCCeEEEeecCEEEECCCCEEEEcccCHHhhhhcCCCHHHHHHHHHHHhhcccccc--ccccHHHHHHHHHHHHhCC-cc
Confidence            48899999999999999999999999999999999999999999999999765432  3467888999999999874 47


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      +++|+|++||+||||.|+|+||+|      ++|++|+.++++|||++.+++++++.+. +..+.+..+....++.|..++
T Consensus       100 ~~~v~f~~sGseA~e~Alk~Ar~~------t~r~~i~~~~~~yHG~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~  172 (431)
T d1zoda1         100 LDRALLLSTGAESNEAAIRMAKLV------TGKYEIVGFAQSWHGMTGAAASATYSAG-RKGVGPAAVGSFAIPAPFTYR  172 (431)
T ss_dssp             CCEEEEESCHHHHHHHHHHHHHHH------HTCCEEEEETTCCCCSSHHHHHTCCSSC-CSSSCCCCTTEEEECCCCTTS
T ss_pred             cceeeecccccchHHHHHHHHHHh------cCCcceeecccccccccchhhccccccc-ccccCCcccCceeeeeecccc
Confidence            899999999999999999999988      4688999999999999999998887654 334444444455555554433


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                      ....... ......+++.++.++....++++|+||+||+++++|+++||++||++|+++|++||++||+|||+|||||+|
T Consensus       173 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~tG~gRtG  251 (431)
T d1zoda1         173 PRFERNG-AYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTG  251 (431)
T ss_dssp             CCCEETT-EECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS
T ss_pred             ccccccc-chhhhhhHHHHHHHHHHhccccccceeeccccccCCccCCCHHHHHHHHHHHHhcCceEEeccccccccccc
Confidence            3222111 112223455666666666778999999999999999999999999999999999999999999999999999


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~  401 (514)
                      ++|+++++|++||++|+||+|+|| +|++++++++++++.+..     +.+.|++||++||++|+++.++|++++++++.
T Consensus       252 ~~~~~~~~gv~PDi~~~gK~l~gG-~p~~av~~~~~~~~~~~~-----~~~~~~~T~~g~pl~~aaa~a~l~~i~~~~~~  325 (431)
T d1zoda1         252 TMFACQRDGVTPDILTLSKTLGAG-LPLAAIVTSAAIEERAHE-----LGYLFYTTHVSDPLPAAVGLRVLDVVQRDGLV  325 (431)
T ss_dssp             SSSTHHHHTCCCSEEEECHHHHTT-SSCEEEEECHHHHHHHHH-----TTCCCCCTTTTCHHHHHHHHHHHHHHHHTTHH
T ss_pred             cccccccCCCCcchhccccccccc-cccceeeeeecchhhhhc-----ccccccCCCCCCcchHHHHHHHHHHhhhhhhh
Confidence            999999999999999999999999 699999999999888764     24568899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE-----eeCCE
Q 010250          402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR-----VSGDN  475 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~-----~~g~~  475 (514)
                      ++++++++++.+.++++ .+++.+.++||.|+|++++|..+.....+.   ......+.+.|+++|++..     +.++.
T Consensus       326 ~~~~~~g~~l~~~l~~~~~~~~~i~~vrG~Glm~~ie~~~~~~~~~~~---~~~~~~i~~~~~~~Gl~~~~~~~~~~~~~  402 (431)
T d1zoda1         326 ARANVMGDRLRRGLLDLMERFDCIGDVRGRGLLLGVEIVKDRRTKEPA---DGLGAKITRECMNLGLSMNIVQLPGMGGV  402 (431)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEEC---TTHHHHHHHHHHHTTEECCEECCTTSCCE
T ss_pred             HHHHHHHHHHhhhhhhhhhcCCCeEEEeecceEEEEEEecCCcccCcc---HHHHHHHHHHHHHhCcccCeeeecCCCCE
Confidence            99999999999999887 678999999999999999997654332221   1246678899999998643     24578


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      |||+||+++|++|||+++++|+++++++
T Consensus       403 i~l~Ppl~it~~eid~~~~~l~~al~~v  430 (431)
T d1zoda1         403 FRIAPPLTVSEDEIDLGLSLLGQAIERA  430 (431)
T ss_dssp             EEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence            9999999999999999999999999875

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=9.2e-72  Score=569.60  Aligned_cols=367  Identities=27%  Similarity=0.493  Sum_probs=323.1

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK  161 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~  161 (514)
                      .|++|+|++|+|+||.|||+||||.+++|+++|||+||+|.+|+.+|++++.+.+..  .+++...++++++.+..+ .+
T Consensus        19 ~p~~i~ra~G~~l~d~dG~~ylD~~~g~~~~~lGh~hp~v~~a~~~~~~~~~~~~~~--~~~~~~~~la~~l~~~~~-~~   95 (387)
T d1vefa1          19 HDLLIVRGQGARVWDAEGNEYIDCVGGYGVANLGHGNPEVVEAVKRQAETLMAMPQT--LPTPMRGEFYRTLTAILP-PE   95 (387)
T ss_dssp             CSSCEEEEEBTEEEETTSCEEEESSHHHHTCTTCBTCHHHHHHHHHHHHHCCCCCTT--SCCHHHHHHHHHHHHTSC-TT
T ss_pred             CCceEEEeEcCEEEECCCCEEEEcchhHHhhhhcCCcHHHHHHHHHHHHhhcccccc--cCCchHHHHHHHhhhhcc-cc
Confidence            789999999999999999999999999999999999999999999999987554332  256778899999998864 46


Q ss_pred             CCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCccc
Q 010250          162 MAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWR  241 (514)
Q Consensus       162 ~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (514)
                      .++|+|++||+||||.|+|+|+.|      ++|.+||.++++|||++.++.++++.+.++..+.+..+.+.+++++    
T Consensus        96 ~~~v~f~~sGseA~e~Aik~Ar~~------t~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~p~~~~~~~~p~~----  165 (387)
T d1vefa1          96 LNRVFPVNSGTEANEAALKFARAH------TGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYN----  165 (387)
T ss_dssp             EEEEEEESSHHHHHHHHHHHHHHH------HSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTT----
T ss_pred             ceeeccccCchHHHHHHHHHHHhh------cccceecccccCCCCCccceEeccCCccccCCCCCCCCCceEeCCC----
Confidence            789999999999999999999988      4678999999999999999999999887776665433333333322    


Q ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccc
Q 010250          242 YAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G  321 (514)
                                    +.+.|++.+    .+++|+||+||+|+++|+++|+++||++|+++|++||++||+|||+|||||+|
T Consensus       166 --------------d~~~l~~~~----~~~iAavi~EPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tGfgR~G  227 (387)
T d1vefa1         166 --------------DVEALKRAV----DEETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTG  227 (387)
T ss_dssp             --------------CHHHHHHHC----CTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS
T ss_pred             --------------CHHHHHHhc----CCCeEEEEEECCCCCCCCccCCHHHHHHHHHHHHHcCceEEecccccccCccC
Confidence                          135566555    36899999999999999999999999999999999999999999999999999


Q ss_pred             ccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHH
Q 010250          322 TMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       322 ~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~  401 (514)
                      ++|+++++|++||++|+||+|+|| +|++++++.+++++.+.       ...|++||++||++|++++++|++++++++.
T Consensus       228 ~~~~~~~~~v~PDi~~~gK~l~gG-~~~~~~~~~~~~~~~~~-------~~~~g~T~~gnPla~aaa~a~L~~l~~~~~~  299 (387)
T d1vefa1         228 KRFAFEHFGIVPDILTLAKALGGG-VPLGVAVMREEVARSMP-------KGGHGTTFGGNPLAMAAGVAAIRYLERTRLW  299 (387)
T ss_dssp             SSSTHHHHTCCCSEEEECGGGGTT-SSCEEEEEEHHHHHTSC-------TTSSCCSSTTCHHHHHHHHHHHHHHHHHTTH
T ss_pred             CCcccccCCcCCceeeecccCCCC-ccccccccceeeeeccc-------cCCccccCCCCcchhhhcccchhhccccccc
Confidence            999999999999999999999999 79999999999988875       3478999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEEEeC
Q 010250          402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMMSP  480 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iRi~p  480 (514)
                      +++++++++++++|+++ ..+.+.++||.|+++++++.+..            ...+...++++|+++.+. ++.|||+|
T Consensus       300 ~~v~~~g~~l~~~L~~l-~~~~v~~vrg~Gl~~~ie~~~~~------------~~~~~~~~~~~g~l~~~~g~~~ir~~P  366 (387)
T d1vefa1         300 ERAAELGPWFMEKLRAI-PSPKIREVRGMGLMVGLELKEKA------------APYIARLEKEHRVLALQAGPTVIRFLP  366 (387)
T ss_dssp             HHHHHHHHHHHHHHHTS-CCTTEEEEEEETTEEEEEESSCS------------HHHHHHHHHHHCEECEESSTTEEEECC
T ss_pred             chHhhhhHHHHHHHHhc-CCCceEEEeecceEEEEEEeCCc------------hHHHHHHHHHCCCeEEecCCCEEEEEC
Confidence            99999999999999988 45778899999999999997542            445777888999887765 46799999


Q ss_pred             CCCCCHHHHHHHHHHHHHHH
Q 010250          481 PFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       481 ~~~~t~e~id~~~~~l~~~l  500 (514)
                      |+++|++|||+++++|+++|
T Consensus       367 pl~it~~~ld~~~~~i~~aL  386 (387)
T d1vefa1         367 PLVIEKEDLERVVEAVRAVL  386 (387)
T ss_dssp             CTTCCHHHHHHHHHHHHHHH
T ss_pred             CccCCHHHHHHHHHHHHHHh
Confidence            99999999999999999987

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=100.00  E-value=7.5e-71  Score=566.99  Aligned_cols=398  Identities=28%  Similarity=0.480  Sum_probs=317.5

Q ss_pred             cccccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhc
Q 010250           52 SSQKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNT  131 (514)
Q Consensus        52 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~  131 (514)
                      +.|+.++...+|..|+| .|          +|++|++++|.|+||.|||+||||.+++|+++|||+||+|++|+.+|+++
T Consensus         2 ~~~~~~~~~~~~~~~~y-~p----------~P~~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~   70 (404)
T d1z7da1           2 TPEDYINNELKYGAHNY-DP----------IPVVLKRAKGVFVYDVNDKRYYDFLSAYSSVNQGHCHPNILNAMINQAKN   70 (404)
T ss_dssp             CHHHHHHHHHHHBCCCC-CC----------EEEEEEEEEBTEEEETTCCEEEESSHHHHTTTTCBTCHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHhcCCCCC-CC----------CCceEEEeecCEEEECCCCEEEEccccHHHHhhhcCcHHHHHHHHHHHHh
Confidence            34555666778888875 44          78999999999999999999999999999999999999999999999998


Q ss_pred             CCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhc--CCCCccEEEEEecCCcccce
Q 010250          132 LPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNAL--GRPNKKKFIARQKSYHGSTL  209 (514)
Q Consensus       132 ~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~--~~~~~~~ii~~~~~yHG~t~  209 (514)
                      +.+.+..+  ...+...+++.+.+..   +.+++.|++||++|++.|+|++++++...  +...+.+++.+.++|||.+.
T Consensus        71 ~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~v~~~~sgs~a~~~a~k~ar~~~~~~~~~~~~~~~~~~~~~~~hg~~~  145 (404)
T d1z7da1          71 LTICSRAF--FSVPLGICERYLTNLL---GYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTL  145 (404)
T ss_dssp             CSCCCTTS--EEHHHHHHHHHHHHHH---TCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC------
T ss_pred             CCCccccc--chHHHHHHHHhhhhcc---ccceeeeeccccchHHHHHHHHHHHHhhcccccccccccccccccCCCCcc
Confidence            76554322  2344444555555553   46799999999999999999999876543  34556789999999999999


Q ss_pred             eeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccC
Q 010250          210 IAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPP  289 (514)
Q Consensus       210 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p  289 (514)
                      .+.+.++.+.++..+.+..+.+.+.+.+.                  .+.++.   ...++++|+||+||+++++|+++|
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~l~~---~~~~~~iAavi~EPi~g~~G~~~~  204 (404)
T d1z7da1         146 GCISASTTKKCTSNFGPFAPQFSKVPYDD------------------LEALEE---ELKDPNVCAFIVEPIQGEAGVIVP  204 (404)
T ss_dssp             --------------------CEEEECTTC------------------HHHHHH---HHTSTTEEEEEECSSBSTTTSBCC
T ss_pred             cccccccccccccCCCCCCccccccccch------------------HHHHHH---HhcCCCEEEEEEEEEcCCCCCccC
Confidence            99998887776665554444444333321                  233333   334678999999999999999999


Q ss_pred             ChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCC
Q 010250          290 PATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTL  369 (514)
Q Consensus       290 ~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~  369 (514)
                      +++||++|+++|++||++||+|||||||||+|.+|+++++|+.|||+|+||+|+||++|+|++++++++++.+.      
T Consensus       205 ~~~fl~~l~~lc~~~g~llI~DEV~tGfgRtG~~~~~e~~gv~PDivt~gK~l~gG~~p~~~v~~~~~i~~~~~------  278 (404)
T d1z7da1         205 SDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVILLGKALSGGHYPISAVLANDDIMLVIK------  278 (404)
T ss_dssp             CTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEECGGGGTTSSCCEEEEECHHHHTTCC------
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEcCccCCCcccccccccccCCCCCEEEEcccccCCCCCcccccchHHHHccCC------
Confidence            99999999999999999999999999999999999999999999999999999999899999999999998876      


Q ss_pred             CcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCC
Q 010250          370 GSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPF  448 (514)
Q Consensus       370 ~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~  448 (514)
                       +..+++||++||++|++++++|++++++++.+++.++++++.+.|.++ .+++.+.+++|.|+|++++|.++...    
T Consensus       279 -~~~~~~T~~gnpl~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~----  353 (404)
T d1z7da1         279 -PGEHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNELVN----  353 (404)
T ss_dssp             -TTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTTCC----
T ss_pred             -CCCcCcCCCCCcchhhhhhhhhhhhhcchhhhhhccchhHHHHHHHHHHhcCCCeEEEEeeCcEEEEEEcCCccc----
Confidence             347889999999999999999999999999999999999999999876 67899999999999999999864321    


Q ss_pred             CCccchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          449 PPEWGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       449 ~~~~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                            ...+...|+++|+++.+.+ +.|||+||+++|+++||+++++|+++++++
T Consensus       354 ------~~~~~~~l~~~Gl~~~~~~~~~ir~~Ppl~it~~~id~~~~~l~~alk~~  403 (404)
T d1z7da1         354 ------VLDICLKLKENGLITRDVHDKTIRLTPPLCITKEQLDECTEIIVKTVKFF  403 (404)
T ss_dssp             ------HHHHHHHHHHTTEECCEETTTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHHhCCeEEecCCCCEEEEECCcCCCHHHHHHHHHHHHHHHHhh
Confidence                  3457789999999998765 679999999999999999999999999765

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=100.00  E-value=2.1e-69  Score=559.84  Aligned_cols=417  Identities=20%  Similarity=0.321  Sum_probs=336.7

Q ss_pred             cccccccccccCccccCCccccccCCCCCCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCC
Q 010250           54 QKEDSTTNGFKGHDMLAPFTAGWQSTDVHPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLP  133 (514)
Q Consensus        54 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~  133 (514)
                      ++..+..+++.+....+|++. +...+..|+++++++|+|+||+|||+||||.+++|+++|||+||+|++|+++|++++.
T Consensus         7 ~~~~~~~~~~~~~g~~~~~~~-~~~~~~~P~~i~~a~G~~l~D~~G~~ylD~~~~~~~~~lGh~hp~i~~ai~~~~~~~~   85 (427)
T d2gsaa_           7 DEIFAAAQKLMPGGVSSPVRA-FKSVGGQPIVFDRVKDAYAWDVDGNRYIDYVGTWGPAICGHAHPEVIEALKVAMEKGT   85 (427)
T ss_dssp             HHHHHHHHHHSGGGSSSGGGC-CTTTSSCCCCEEEEEBTEEEETTSCEEEESSGGGTTTTTCBTCHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHhhcCCCCCCCccc-cccCCCCCcEEEEeecCEEEECCCCEEEEechhHHHHhccCCcHHHHHHHHHHHHhcC
Confidence            344445666766665566544 2233457999999999999999999999999999999999999999999999999865


Q ss_pred             ccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee
Q 010250          134 FYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS  213 (514)
Q Consensus       134 ~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~  213 (514)
                      +.    ..+.....++++++.+..+  ..++|+|++||+||||.|+|+|+.|      ++|++||.++++|||++.++++
T Consensus        86 ~~----~~~~~~~~~la~~~~~~~~--~~~~v~f~~sGseA~e~Alk~ar~~------t~r~~ii~~~~~yHG~t~~~~~  153 (427)
T d2gsaa_          86 SF----GAPCALENVLAEMVNDAVP--SIEMVRFVNSGTEACMAVLRLMRAY------TGRDKIIKFEGCYHGHADMFLV  153 (427)
T ss_dssp             CC----SSCCHHHHHHHHHHHHHST--TCSEEEEESSHHHHHHHHHHHHHHH------HCCCEEEEETTCCCCSCGGGCS
T ss_pred             cc----ccchhHHHHHHHHHHhhCC--ccccccccCCcHHHHHHHHHHHHHh------cCCCeEEEEecccccCcceeee
Confidence            43    2245667788999988864  5689999999999999999999988      4688999999999999999999


Q ss_pred             cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhH
Q 010250          214 LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATY  293 (514)
Q Consensus       214 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~  293 (514)
                      +++.+.....+. ..+.+.....++...          +.+++++++|+++.+ .++++++||+||+++++|+++||++|
T Consensus       154 ~~~~~~~~~~~p-~~~~~~~~~~~~~~~----------~~~~~~~~le~~~~~-~~~~iaavi~Epi~g~~G~~~~~~~~  221 (427)
T d2gsaa_         154 KAGSGVATLGLP-SSPGVPKKTTANTLT----------TPYNDLEAVKALFAE-NPGEIAGVILEPIVGNSGFIVPDAGF  221 (427)
T ss_dssp             SCCHHHHHTTCC-SCSSSCHHHHTTEEE----------ECTTCHHHHHHHHTT-STTTEEEEEECSSBCSSSCBCCCTTH
T ss_pred             ecCCcccccCCC-CCCCCcccCccceec----------cCcchHHHHHHHHHh-CCCCeEEEEEcCCcCCCCCccCCHHH
Confidence            888654433221 111111111111111          112346788888865 45789999999999999999999999


Q ss_pred             HHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCccc
Q 010250          294 FEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS  373 (514)
Q Consensus       294 L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~  373 (514)
                      |++|+++|++||++||+||||||| |+|++|+++++|+.|||+++||+++|| +|+|++++++++++.+.+.    +.+.
T Consensus       222 l~~l~~lc~~~~~llI~DEv~tG~-r~g~~~~~~~~gi~PDi~~~gK~lggG-~p~~a~~~~~~i~~~~~~~----~~~~  295 (427)
T d2gsaa_         222 LEGLREITLEHDALLVFDEVMTGF-RIAYGGVQEKFGVTPDLTTLGKIIGGG-LPVGAYGGKREIMQLVAPA----GPMY  295 (427)
T ss_dssp             HHHHHHHHHHTTCEEEEECTTTBT-TTBTTCHHHHTTCCCSEEEECGGGGTT-SCCEEEEECHHHHTTBTTT----SSBC
T ss_pred             HHHHHHHHHHhceeeeeccccccc-eecccchHHhcCCCHHHHhhhhccCCC-cceeeeeehHHHHHHhccc----CCCc
Confidence            999999999999999999999999 889999999999999999999999999 7999999999999988642    3567


Q ss_pred             ccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCC--CCCC
Q 010250          374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNE--PFPP  450 (514)
Q Consensus       374 ~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~--~~~~  450 (514)
                      |++||++||++|++|+++|++++++++.+++++++++|++.|+++ .+++....+.+.|.++++.+.+......  ....
T Consensus       296 ~~~T~~gnpla~AAala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~~~ggm~~i~~~~~~v~~~~~~~~~  375 (427)
T d2gsaa_         296 QAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACGGQVSGMFGFFFTEGPVHNYEDAKKS  375 (427)
T ss_dssp             CCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSCCCCSHHHHTTS
T ss_pred             CCCCCCCCchhhHHHHHhhHHhhhhhHHhhhhHHHHHHHHHHHHHHhhcCCCcEEcccCCeEEEEEeccCCCCHHHhhcc
Confidence            899999999999999999999999999999999999999999998 5677777788888899998865432210  0111


Q ss_pred             ccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          451 EWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       451 ~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +......+...|+++||++.+.+.. ++.||+++|++|||+++++|++++++
T Consensus       376 d~~~~~~~~~~ll~~Gv~l~p~~~~-~~~~~l~~Te~dId~~l~al~~al~~  426 (427)
T d2gsaa_         376 DLQKFSRFHRGMLEQGIYLAPSQFE-AGFTSLAHTEEDIDATLAAARTVMSA  426 (427)
T ss_dssp             CHHHHHHHHHHHHHTTEECCSSTTS-CEECCTTCCHHHHHHHHHHHHHHHTC
T ss_pred             cHHHHHHHHHHHHHCCEEECCCCCc-ceeCCCCCCHHHHHHHHHHHHHHHHh
Confidence            2234466888999999998875543 34478999999999999999999865

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=7.4e-70  Score=567.86  Aligned_cols=395  Identities=19%  Similarity=0.308  Sum_probs=316.2

Q ss_pred             CCeEEEeeeCcEEEeCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccc--cc-cCCchHHHHHHHHHHhcC
Q 010250           82 HPLVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSF--WN-RTTKPSLDLAKELLEMFT  158 (514)
Q Consensus        82 ~p~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~--~~-~~~~~~~ela~~L~~~~~  158 (514)
                      +|+++++|+|+|+||+|||+||||.+|+|+++|||+||+|++|+.+|+++..+.+..  .. .+.....+|+++|.+.. 
T Consensus        35 ~p~~~~~g~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~~a~~lae~l~~~~-  113 (461)
T d1ohwa_          35 FFCNYEESRGNYLVDVDGNRMLDLYSQISSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVA-  113 (461)
T ss_dssp             CCBCTTTCBBTEEEBTTSCEEEESSHHHHTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGC-
T ss_pred             CCeEEEEeecCEEEECCCCEEEEcccCHHHHhhcCCcHHHHHHHHHHHhhhhhcccccccccchHHHHHHHHHHHHhhh-
Confidence            688999999999999999999999999999999999999999999998865433211  11 12233456666666654 


Q ss_pred             cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcC--------------------CCCccEEEEEecCCcccceeeeecCCCc
Q 010250          159 ASKMAKVFFTNSGSEANDTQVKLVWYYNNALG--------------------RPNKKKFIARQKSYHGSTLIAASLSGLP  218 (514)
Q Consensus       159 ~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~--------------------~~~~~~ii~~~~~yHG~t~~~~~~s~~~  218 (514)
                      +.++++|+|++||+||||.|||+|+.|+..++                    -+++.+||.+.++|||+|.+++++++.+
T Consensus       114 ~~~~~~v~f~~sGseAve~Aik~Ar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~~~~syHG~t~~a~s~tg~~  193 (461)
T d1ohwa_         114 PKGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSK  193 (461)
T ss_dssp             CTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHTCCSC
T ss_pred             ccCcceeeeecchhhhhHHHHHHHHHHhhhcccCcccccchhhhhhhhccccCCCCceEEEecCCcCCCCcccccccCCc
Confidence            44789999999999999999999998865432                    1346689999999999999999999987


Q ss_pred             cccCCCCCCCCcccccCCCC-cccCCCCCCChhHHHHHHHHHHHHHHHH--hCCCcEEEEEEccccCCCCcccCChhHHH
Q 010250          219 ALHQKFDLPAPFVLHTDCPH-YWRYAHPGETEEEYSTRLANNLEDLILK--EGPETIAAFIAEPVIGAGGVIPPPATYFE  295 (514)
Q Consensus       219 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~le~li~~--~~~~~~aavivEpv~~~~G~~~p~~~~L~  295 (514)
                      .+++.+.+...... .+.+. .+.........+.....+.+++++++..  .+++++++||+||+||++|+++||++||+
T Consensus       194 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPi~g~~G~~~~~~~fl~  272 (461)
T d1ohwa_         194 AIHKIDIPSFDWPI-APFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFR  272 (461)
T ss_dssp             HHHHTTCCCCCCCE-ECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHH
T ss_pred             ccccccccccCCcc-cccccccccccccccccchhhhhhHHHHHHHHHHHHhCCCccceeeeccccccccccCchhhHHH
Confidence            76654432222111 11110 0000001111122334556777777653  35678999999999999999999999999


Q ss_pred             HHHHHHHhcCCEEEEechhcCcccccccceecccCCC--CchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCccc
Q 010250          296 KVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK--PDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFS  373 (514)
Q Consensus       296 ~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~--pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~  373 (514)
                      +|+++|++||++||+|||||||||+|++|+++++|+.  ||++|+||+|+||+.+.+.+     +    ..    ...+.
T Consensus       273 ~lr~lc~~~gillI~DEV~tG~gRtG~~~~~e~~gi~~~PDiv~~gK~l~~g~~~~~~~-----~----~~----~~~~~  339 (461)
T d1ohwa_         273 KLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFSKKMMTGGFFHKEE-----F----RP----NAPYR  339 (461)
T ss_dssp             HHHHHHHHTTCEEEEECTTTCSSTTSSSSGGGGGCCSSCCSEEEECGGGSSEEEEECGG-----G----SC----SSTTS
T ss_pred             HHHHHHHhhCcceeccccccccccccccccccccccccCchhhhhhhcccccccccccc-----c----cc----ccccc
Confidence            9999999999999999999999999999999999985  99999999999985443322     1    11    12457


Q ss_pred             ccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc-cCCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCc
Q 010250          374 HGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF-SDSP-IIGEIRGTGLILGTEFADNKSPNEPFPPE  451 (514)
Q Consensus       374 ~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l-~~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~  451 (514)
                      |++||++||++|++|+++|++++++++.+++++++++|+++|+++ .++| ++.+|||.|+|+++++.+..         
T Consensus       340 ~~~T~~g~p~~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~l~~l~~~~~~~i~~vrG~Gl~~~ie~~~~~---------  410 (461)
T d1ohwa_         340 IFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTPDES---------  410 (461)
T ss_dssp             SCCSCSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTEEEEECSSHH---------
T ss_pred             cccccccccccchhhcccchhhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCceEEeeeeeEEEEEEcCCHH---------
Confidence            889999999999999999999999999999999999999999998 5564 78899999999999986532         


Q ss_pred             cchHHHHHHHHHHCCcEEEeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          452 WGIGAYFGAQCEKHGMLVRVSG-DNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       452 ~~~~~~~~~~l~~~Gv~~~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                        ....+...|+++|+++.+.+ +.|||.||+++|++|||+++++|+++|++
T Consensus       411 --~~~~i~~~~~~~Gll~~~~~~~~ir~~PpL~it~~eid~~~~~l~~~l~e  460 (461)
T d1ohwa_         411 --IRNKLISIARNKGVMLGGCGDKSIRFRPTLVFRDHHAHLFLNIFSDILAD  460 (461)
T ss_dssp             --HHHHHHHHHHHTTEECEEETTTEEECCCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred             --HHHHHHHHHHHCCeEEeeCCCCEEEEeCCcCCCHHHHHHHHHHHHHHHhc
Confidence              46678899999999998865 67999999999999999999999999875

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.3e-39  Score=332.98  Aligned_cols=348  Identities=20%  Similarity=0.260  Sum_probs=267.5

Q ss_pred             eEEEeeeCcEEEeCCCCEEEEccCCcccccCCCC-CHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCc
Q 010250           84 LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGGS-EPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTA  159 (514)
Q Consensus        84 ~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh~-~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~  159 (514)
                      .++++++|.++||.||++||||+|+   ++||+. ||+|++|+.+++++.+..   ++...+..+.+.+++++|++++  
T Consensus        29 ~~i~~~~g~~v~~~dG~~~l~f~s~---dYLGl~~hp~v~~a~~~a~~~~g~~~~~sr~~~g~~~~~~~lE~~lA~~~--  103 (401)
T d1fc4a_          29 RIITSAQQADITVADGSHVINFCAN---NYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL--  103 (401)
T ss_dssp             CCBCSCSSSEEEBTTSCEEEECCCS---CTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH--
T ss_pred             eeccCCCCCeEEecCCCEEEEEEcc---ccccccCCHHHHHHHHHHHHHhCCCcccceeeccCcHHHHHHHHHHHHhh--
Confidence            4688999999999999999999988   789985 999999999999875433   2344556788999999999998  


Q ss_pred             CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250          160 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY  239 (514)
Q Consensus       160 ~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  239 (514)
                       +.+.+++++||++|+..+++..         .++.++|+.+...|.+...++..++....+                  
T Consensus       104 -g~e~al~~~SG~~An~~~i~~l---------~~~~d~i~~d~~~h~s~~~G~~~~~a~~~~------------------  155 (401)
T d1fc4a_         104 -GMEDAILYSSCFDANGGLFETL---------LGAEDAIISDALNHASIIDGVRLCKAKRYR------------------  155 (401)
T ss_dssp             -TCSEEEEESCHHHHHHTTHHHH---------CCTTCEEEEETTCCHHHHHHHHTSCSEEEE------------------
T ss_pred             -cCCceEEecchhhhhHHHHHHh---------cCCCcEEEeCCcchHHHHccccccCceEEE------------------
Confidence             5689999999999999999866         345667778888888876665555433211                  


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCc
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAF  317 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~  317 (514)
                                  +.+++.+++++++.+.  ......+|++|+++++.|++.|    |++|++||++||++||+||+|+ +
T Consensus       156 ------------~~~~d~~~le~~~~~~~~~~~~~~liv~egv~s~~G~~~~----L~~l~~L~~~~~a~LivDeah~-~  218 (401)
T d1fc4a_         156 ------------YANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIAN----LKGVCDLADKYDALVMVDDSHA-V  218 (401)
T ss_dssp             ------------ECTTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECC----HHHHHHHHHHTTEEEEEECTTT-T
T ss_pred             ------------EcCCChHHHHHHHHHhhhcccCceEEEEcCCCCCCCchhh----hhHHHHHHhhcCcEEEehhhhc-c
Confidence                        1122246666665442  3356689999999999999987    9999999999999999999998 5


Q ss_pred             ccccc--cceecccCCC--Cchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHH
Q 010250          318 GRLGT--MFGCDKYSIK--PDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEA  391 (514)
Q Consensus       318 gr~G~--~~~~~~~gv~--pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aa  391 (514)
                      |+.|.  .+..+++++.  +|++  +++|+++|  .+.|++++++++++.+....     ..+.++.+.+|..++++.++
T Consensus       219 g~~g~~G~G~~~~~~~~~~~dii~~tl~Ka~gg--~~Gg~v~g~~~~~~~l~~~~-----~~~~~s~~l~p~~~~aa~~~  291 (401)
T d1fc4a_         219 GFVGENGRGSHEYCDVMGRVDIITGTLGKALGG--ASGGYTAARKEVVEWLRQRS-----RPYLFSNSLAPAIVAASIKV  291 (401)
T ss_dssp             TTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCS--SSCEEEEECHHHHHHHHHHC-----HHHHHSCCCCHHHHHHHHHH
T ss_pred             ccccCCCCccchhccCCCCCeEEEeeccccccc--CCcccccCCHHHHHHHHcCC-----hhhhhcCCCCHHHHHHHHhh
Confidence            56665  3456777774  5655  79999975  56788999999999887421     12335666778888889999


Q ss_pred             HHHHhh-ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250          392 LKIYKE-RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR  470 (514)
Q Consensus       392 l~~~~~-~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~  470 (514)
                      ++.+.+ +++.++++++.++|++.+... ..+..   ...+.++.+.+.+..           .+..+.+.|+++||++.
T Consensus       292 l~~~~~~~~~~~~l~~~~~~~~~~l~~~-g~~~~---~~~~pIv~v~~~~~~-----------~a~~~~~~L~~~Gi~v~  356 (401)
T d1fc4a_         292 LEMVEAGSELRDRLWANARQFREQMSAA-GFTLA---GADHAIIPVMLGDAV-----------VAQKFARELQKEGIYVT  356 (401)
T ss_dssp             HHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCCBC---CSSSSEEEEEEECHH-----------HHHHHHHHHHHTTEECC
T ss_pred             hcccccCHHHHHHHHHHHHHHHhhhccc-CCccC---CCCCCEEEEEECCHH-----------HHHHHHHHHHHCCceEE
Confidence            987765 467899999999999999876 21211   113445566665432           35578899999999987


Q ss_pred             ee-------CC-EEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          471 VS-------GD-NIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       471 ~~-------g~-~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      +.       +. .||++++..+|+||||+++++|+++.+++
T Consensus       357 ~i~~PtVp~g~~~lRi~~~a~hT~edId~~v~al~ev~~~l  397 (401)
T d1fc4a_         357 GFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL  397 (401)
T ss_dssp             EECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             eECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence            42       33 49999999999999999999999998764

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=3.6e-36  Score=305.49  Aligned_cols=341  Identities=18%  Similarity=0.260  Sum_probs=265.7

Q ss_pred             eEEEeeeCcEEEeCCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCc---cccccccCCchHHHHHHHHHHhcCc
Q 010250           84 LVIEKSEGSYVYDVNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPF---YHSFWNRTTKPSLDLAKELLEMFTA  159 (514)
Q Consensus        84 ~~~~~~~G~~~~d~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~---~~~~~~~~~~~~~ela~~L~~~~~~  159 (514)
                      .++.+++|.++. +||++||||+|+   ++||. .||+|++++.+++++++.   .++.+.+..+.+.+|+++|++++  
T Consensus        23 ~~~~~~~g~~i~-~~g~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~G~~~~~sr~~~g~~~~~~~lE~~LA~~~--   96 (383)
T d1bs0a_          23 YPVAQGAGRWLV-ADDRQYLNFSSN---DYLGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL--   96 (383)
T ss_dssp             CCCSBCSSSEEE-ETTEEEEECSCC---CTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH--
T ss_pred             cccCCCCCCeEE-ECCeEEEEEEcc---cccccCCCHHHHHHHHHHHHHhCCCCCccccccCcchHHHHHHHHHHHhc--
Confidence            456899999997 899999999998   88998 599999999999988543   34455678899999999999998  


Q ss_pred             CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCc
Q 010250          160 SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHY  239 (514)
Q Consensus       160 ~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~  239 (514)
                       +.+.+++++||+.|+..++...         .++.++++.+...|.+...+...++.....                  
T Consensus        97 -g~e~al~~~SG~~an~~~i~al---------~~~~d~v~~d~~~h~si~~g~~~~~~~~~~------------------  148 (383)
T d1bs0a_          97 -GYSRALLFISGFAANQAVIAAM---------MAKEDRIAADRLSHASLLEAASLSPSQLRR------------------  148 (383)
T ss_dssp             -TCSEEEEESCHHHHHHHHHHHH---------CCTTCEEEEETTCCHHHHHHHHTSSSEEEE------------------
T ss_pred             -CCCceEEecccchhhHHHHHhh---------cCCCceEEeeccccHHHhhccccCCCcceE------------------
Confidence             5689999999999999999876         456788899999999877766555433211                  


Q ss_pred             ccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccc
Q 010250          240 WRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGR  319 (514)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr  319 (514)
                                  |.|++.++|++.+.+.. ++..+|++|+++++.|.+.|    +++|.++|++||++||+||+|+ +|-
T Consensus       149 ------------~~hnd~~~le~~l~~~~-~~~~~vv~e~v~s~~G~i~p----l~~l~~l~~~~~~~livDeah~-~gv  210 (383)
T d1bs0a_         149 ------------FAHNDVTHLARLLASPC-PGQQMVVTEGVFSMDGDSAP----LAEIQQVTQQHNGWLMVDDAHG-TGV  210 (383)
T ss_dssp             ------------ECTTCHHHHHHHHHSCC-SSCEEEEEESBCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTT-TTT
T ss_pred             ------------ecchHHHHHHHHhcccC-CCceEEEecCCCCCCCcccc----hhHHHHHHHhcCcEEEeeccee-eee
Confidence                        23445788999887654 45678999999999999998    9999999999999999999997 655


Q ss_pred             ccc--cceecccCCCCchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250          320 LGT--MFGCDKYSIKPDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY  395 (514)
Q Consensus       320 ~G~--~~~~~~~gv~pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~  395 (514)
                      .|+  .+..+++++.+|++  ++||++++   +.|+++++.++++.+....     ....++...+|..++++.++++++
T Consensus       211 ~G~~g~G~~~~~~~~~~~~~~t~~ka~g~---~Gg~v~~~~~~~~~l~~~~-----~~~~~s~~~~p~~~aa~~~a~~~~  282 (383)
T d1bs0a_         211 IGEQGRGSCWLQKVKPELLVVTFGKGFGV---SGAAVLCSSTVADYLLQFA-----RHLIYSTSMPPAQAQALRASLAVI  282 (383)
T ss_dssp             SSGGGCCHHHHTTCCCSEEEEESSSTTSS---CCEEEEECHHHHHHHHHHC-----HHHHSSBCCCHHHHHHHHHHHHHH
T ss_pred             cCCcccchHHHcCCccccccccccccccc---cccccccchhHHHHHHhhc-----hhhhhcccccchHHHHHHHHHHHH
Confidence            555  23468899988876  47888875   4588999999999887531     234466777888889999999887


Q ss_pred             hhc---cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe-
Q 010250          396 KER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV-  471 (514)
Q Consensus       396 ~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~-  471 (514)
                      ++.   ...+++.++..++++.|+++   ++. ...+.+.++.+.+.+..           .+..+.+.|+++||++.+ 
T Consensus       283 ~~~~~~~~~~~l~~~~~~~~~~l~~~---g~~-~~~~~s~Ii~v~~g~~~-----------~a~~~~~~L~~~Gi~v~~~  347 (383)
T d1bs0a_         283 RSDEGDARREKLAALITRFRAGVQDL---PFT-LADSCSAIQPLIVGDNS-----------RALQLAEKLRQQGCWVTAI  347 (383)
T ss_dssp             HSHHHHHHHHHHHHHHHHHHHHHTTS---SCE-ECSCCSSBCCEEEESHH-----------HHHHHHHHHHHTTEECCEE
T ss_pred             HhhhhHHHHHHHHHHHHHHHHHHHhc---CCc-cCCCCCCEEEEEECCHH-----------HHHHHHHHHHHCCceEEEE
Confidence            753   45677888888999988876   211 11223444445444321           356788999999999874 


Q ss_pred             ------eCC-EEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250          472 ------SGD-NIMMSPPFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       472 ------~g~-~iRi~p~~~~t~e~id~~~~~l~~~  499 (514)
                            .|. .||++++..+|+||||+++++|+.+
T Consensus       348 ~~PtVp~g~~~lRi~~~a~ht~edid~l~~~L~~~  382 (383)
T d1bs0a_         348 RPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN  382 (383)
T ss_dssp             CTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHhc
Confidence                  233 4999999999999999999998764

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=100.00  E-value=6.7e-32  Score=272.89  Aligned_cols=332  Identities=18%  Similarity=0.182  Sum_probs=255.2

Q ss_pred             CCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCc---cccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChh
Q 010250           97 VNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPF---YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGS  172 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~---~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGs  172 (514)
                      .++++++||+|+   ++||. +||+|++++.+++++.+.   .++.+.+..+.+.+|+++|++++   +.+.+++++||+
T Consensus        42 ~~~~~~~~FsSn---dYLGL~~~p~v~~a~~~al~~yG~gs~~Sr~~~G~~~~h~~LE~~lA~~~---g~e~all~~sG~  115 (396)
T d2bwna1          42 GGKQDITVWCGN---DYLGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLH---QKEAALVFSSAY  115 (396)
T ss_dssp             SCEEEEEECSCS---CTTSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHT---TCSEEEEESCHH
T ss_pred             CCCeEEEEEEcc---cccCcCCCHHHHHHHHHHHHHhCCCccccccccCCchHHHHHHHHHHHHh---CCCceeeeecch
Confidence            356899999999   89998 699999999999987543   34566778899999999999998   567899999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY  252 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (514)
                      .||..++.....       .++..+|+.+...|.+...++.+++.+...                              |
T Consensus       116 ~An~~~i~~l~~-------~~~~d~i~~D~~~Hasi~~g~~ls~a~~~~------------------------------f  158 (396)
T d2bwna1         116 NANDATLSTLRV-------LFPGLIIYSDSLNHASMIEGIKRNAGPKRI------------------------------F  158 (396)
T ss_dssp             HHHHHHHHHHHH-------HSTTCEEEEETTCCHHHHHHHHHSCCCEEE------------------------------E
T ss_pred             HHHHHHHHHHhc-------ccCCCceeehhhhhhccchhhhccccCceE------------------------------e
Confidence            999999986521       235678999999999887777777644321                              2


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--cceecccC
Q 010250          253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MFGCDKYS  330 (514)
Q Consensus       253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--~~~~~~~g  330 (514)
                      .|++.+++++++....+.....|++|.++++.|++.|    |++|.+||++||+.|++||+|+ ||-.|+  .+..++++
T Consensus       159 ~Hnd~~~l~~l~~~~~~~~~~~iv~egvySmdGd~ap----l~~l~~L~~~y~~~L~vDeAHs-~Gv~G~~G~G~~~~~~  233 (396)
T d2bwna1         159 RHNDVAHLRELIAADDPAAPKLIAFESVYSMDGDFGP----IKEICDIAEEFGALTYIDEVHA-VGMYGPRGAGVAERDG  233 (396)
T ss_dssp             CTTCHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTT-TTTSSTTSCCHHHHHT
T ss_pred             ecchHHHhhhHHhhhcccCceeEEEEeeccCcccccc----cHhHHHHhhhhcceeeecccee-eeeeccccccchhhcC
Confidence            3445688888887766677789999999999999999    9999999999999999999996 766665  33456777


Q ss_pred             CC--Cchh--chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhc---cHHHH
Q 010250          331 IK--PDLV--SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKER---NIVEQ  403 (514)
Q Consensus       331 v~--pDiv--~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~---~~~~~  403 (514)
                      +.  .|++  ||||++|+.+   |++++++++++.+....     ....++.+.+|..++++.++++++..+   ....+
T Consensus       234 ~~~~~di~~gTlsKa~g~~G---g~v~~~~~~i~~l~~~~-----~~~ifStalpp~~~aa~~~al~i~~~~~~~~~r~~  305 (396)
T d2bwna1         234 LMHRIDIFNGTLAKAYGVFG---GYIAASARMVDAVRSYA-----PGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDA  305 (396)
T ss_dssp             CGGGCSEEEEESSSTTCSCC---EEEEECHHHHHHHHHHC-----HHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHH
T ss_pred             Cceeeeeeeecccccccccc---cccchhHHHHHHHHhhc-----chhhhcccCcHHHHHHHHHHHHHhhcchHHHHHHH
Confidence            64  4555  7999998743   78899999999997532     123455666788888899999988643   34667


Q ss_pred             HHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------C-C
Q 010250          404 VNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------G-D  474 (514)
Q Consensus       404 ~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g-~  474 (514)
                      ++.+.+++++.|..+ ..++..   ..+.++.+.+.++.           .+..+++.|+ ++|+++.+.       + .
T Consensus       306 l~~~~~~~~~~l~~~-g~~~~~---~~spIvpv~ig~~~-----------~~~~~a~~lL~e~Gi~v~~i~~PtVp~g~~  370 (396)
T d2bwna1         306 QQMHAKVLKMRLKAL-GMPIID---HGSHIVPVVIGDPV-----------HTKAVSDMLLSDYGVYVQPINFPTVPRGTE  370 (396)
T ss_dssp             HHHHHHHHHHHHHHH-TCCBCC---CSSSCEEEECCCHH-----------HHHHHHHHHHHHHCEECCEECTTTSCTTCC
T ss_pred             HHHHHHHHHHHHHhc-CCCcCC---CCCCEEEEEeCCHH-----------HHHHHHHHHHHhCCEEEEEECCCcCCCCCe
Confidence            778889999999876 222221   13455666654322           3456777755 689998742       2 4


Q ss_pred             EEEEeCCCCCCHHHHHHHHHHHHHH
Q 010250          475 NIMMSPPFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       475 ~iRi~p~~~~t~e~id~~~~~l~~~  499 (514)
                      .|||++...+|++|||+++++|++.
T Consensus       371 rlRi~lsa~ht~edId~l~~~L~~i  395 (396)
T d2bwna1         371 RLRFTPSPVHDLKQIDGLVHAMDLL  395 (396)
T ss_dssp             EEEECCCTTSCHHHHHHHHHHHHHH
T ss_pred             eEEEEeCccCCHHHHHHHHHHHHHh
Confidence            5999999999999999999999874

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.93  E-value=1.4e-26  Score=240.97  Aligned_cols=366  Identities=14%  Similarity=0.163  Sum_probs=218.1

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT  177 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~  177 (514)
                      .|+.+|||.|..++...++..   .++    +..+..   .|+ ..+...+|++++++++   +.++++|++||++||+.
T Consensus        40 ~~~~~id~~sd~~t~~~~~~~---~a~----~~~gd~---~y~-~~~~~~~le~~~a~l~---g~~~~~~~~sGt~A~~~  105 (465)
T d1ax4a_          40 SSAVYIDLLTDSGTNAMSDHQ---WAA----MITGDE---AYA-GSRNYYDLKDKAKELF---NYDYIIPAHQGRGAENI  105 (465)
T ss_dssp             GGGCSEECSCSSSCCCEEHHH---HHH----HHTCCC---CSS-SCHHHHHHHHHHHHHH---CCCEEEEESSHHHHHHH
T ss_pred             ccCeeeecccccchhhhhHHH---HHH----Hhhhhh---hhc-cChHHHHHHHHHHHHH---CCCEEEECCCcHHHHHH
Confidence            466799999987765544322   222    222211   112 3455678999999998   57899999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeee-ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL  256 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (514)
                      |+++++.+....+..+...|   .+.+|+.+..+. ...|.....    ...+.......++.++           ...+
T Consensus       106 a~~~~~~~g~~~~~~~~~~i---~~~~h~~t~~~~~~~~g~~~~~----~~~~~~~~~~~~~~~~-----------~~~d  167 (465)
T d1ax4a_         106 LFPVLLKYKQKEGKAKNPVF---ISNFHFDTTAAHVELNGCKAIN----IVTEKAFDSETYDDWK-----------GDFD  167 (465)
T ss_dssp             HHHHHHHHHHHTTCCSSCEE---EESSCCHHHHHHHHHTTCEEEE----CBCGGGGCTTSCCTTT-----------TCBC
T ss_pred             HHHHHHHHHHhcCCCCCeEE---eccchhhhhHHHHHHcCCeeec----ccccccCCCCCCCCcc-----------CccC
Confidence            99999988766665544433   246676554332 222211100    0000000000111111           1123


Q ss_pred             HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc------CcccccccceecccC
Q 010250          257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC------AFGRLGTMFGCDKYS  330 (514)
Q Consensus       257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t------G~gr~G~~~~~~~~g  330 (514)
                      .++|++++.+..++.++++++|++++++|..+++.++|++|+++|++||++||+||+++      +.++++..+..+..+
T Consensus       168 ~~~l~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~i~~~~~~~g~~l~~D~~~~~~~~~~~~~~~~~~~~~~~~~  247 (465)
T d1ax4a_         168 IKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKE  247 (465)
T ss_dssp             HHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHH
T ss_pred             HHHHHHHHHhhccccccceeeccccccCceecCCHHHHHHHHHHHHHcCCEEEEECcchhhhhcccccccccccccchhh
Confidence            68899999887778899999999999999999999999999999999999999999987      334554444444444


Q ss_pred             CCC------chhchhhhhcCCcccceeEEeCHH--HHHHhhhccCCCCcccccCCCCCcHHHHHHHHH-HHHHHhhccHH
Q 010250          331 IKP------DLVSFAKALSSAYMPIGAILVSPE--VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIE-ALKIYKERNIV  401 (514)
Q Consensus       331 v~p------Div~~sK~l~gG~~pig~v~~~~~--i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~a-al~~~~~~~~~  401 (514)
                      +.|      |++++||..+++.+..|+++.++.  +.+......   ....+..++++....+.++.+ .+.....++..
T Consensus       248 i~~~~~~~~d~~s~s~~k~~~~~~~g~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~a~~~~~~e~~~~~~~  324 (465)
T d1ax4a_         248 VIFDMYKYADALTMSAKKDPLLNIGGLVAIRDNEEIFTLARQRC---VPMEGFVTYGGLAGRDMAAMVQGLEEGTEEEYL  324 (465)
T ss_dssp             HHHHHGGGCSEEEEETTSTTCCSSCEEEEESSCHHHHHHHHHHH---HHHTCSTTTTTCCHHHHHHHHHHHHHTTCHHHH
T ss_pred             hccccccccceeEeecccCcccccceeEeecchHHHHHhhhccc---cccccCCCcchhhHHHHHHHhhhhHHhhhHHHH
Confidence            443      556777665665445566666543  222222100   011223344443333333332 23333334566


Q ss_pred             HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------
Q 010250          402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---------  472 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------  472 (514)
                      ++..++.++|.+.|+++ ..+.+....+.+.+......-.....    ............+.+.|+.....         
T Consensus       325 ~~~~~~~~~l~~~L~~~-g~~~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ll~~~GI~~~~~~~~~~~~~~  399 (465)
T d1ax4a_         325 HYRIGQVKYLGDRLREA-GIPIQYPTGGHAVFVDCKKLVPQIPG----DQFPAQAVINALYLESGVRAVEIGSFLLGRDP  399 (465)
T ss_dssp             HHHHHHHHHHHHHHHHT-TCCBCSSCCSSEEEEESTTTCTTSCG----GGCHHHHHHHHHHHHHCEECEEESHHHHCBCT
T ss_pred             HHHHHHHHHHHHHHHhh-cCccccCCCcceeeeehhhhcCCCcc----ccchhHHHHHHHHHhcCceecccccccccccc
Confidence            77777889999999886 34444444333333222111111111    11112333455566778765421         


Q ss_pred             ---------CCEEEEe-CCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          473 ---------GDNIMMS-PPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       473 ---------g~~iRi~-p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                               .+.+||+ |++.+|+||||.++++|++++++.
T Consensus       400 ~~g~~~~~~~~~vRlalP~~~~T~eeiD~vv~~l~~v~~~~  440 (465)
T d1ax4a_         400 ATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKF  440 (465)
T ss_dssp             TTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred             ccCCccCCCCCceEEeCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence                     2469997 667889999999999999887654

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.91  E-value=5e-24  Score=210.42  Aligned_cols=339  Identities=12%  Similarity=0.030  Sum_probs=204.7

Q ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHH
Q 010250          102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKL  181 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~  181 (514)
                      +|||.+-+.+.+    +|++++|+.++...    ...+ ++.+...+|+++|++++   +.++++|++||++|++.|++.
T Consensus         1 ~~~~~~~~~t~p----~p~v~~A~~~a~~g----~~~y-g~~p~~~~le~~lA~~~---G~~~~~~~~sGt~A~~~al~a   68 (343)
T d1m6sa_           1 MIDLRSDTVTKP----TEEMRKAMAQAEVG----DDVY-GEDPTINELERLAAETF---GKEAALFVPSGTMGNQVSIMA   68 (343)
T ss_dssp             CEECSCGGGCCC----CHHHHHHHHTCCCC----CGGG-TCCHHHHHHHHHHHHHT---TCSEEEEESCHHHHHHHHHHH
T ss_pred             CcccccccCCCC----CHHHHHHHHhhhcC----Cccc-CCCHHHHHHHHHHHHHH---CCCeEEEeCCHHHHHHHHHHH
Confidence            478887765544    79999999765321    1111 24466789999999998   467899999999999999988


Q ss_pred             HHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHH
Q 010250          182 VWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLE  261 (514)
Q Consensus       182 a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le  261 (514)
                      ++        ...+.++.....++..............          ....++...              ...+.++++
T Consensus        69 ~~--------~~g~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~--------------~~~~~~~~~  116 (343)
T d1m6sa_          69 HT--------QRGDEVILEADSHIFWYEVGAMAVLSGV----------MPHPVPGKN--------------GAMDPDDVR  116 (343)
T ss_dssp             HC--------CTTCEEEEETTCHHHHSSTTHHHHHTCC----------EEEEECEET--------------TEECHHHHH
T ss_pred             Hh--------ccCCceeccccccceeeecccccccccc----------eeecccccc--------------CccCHHHHH
Confidence            74        2334555555544333211111111000          000010000              000134555


Q ss_pred             HHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh
Q 010250          262 DLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA  339 (514)
Q Consensus       262 ~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s  339 (514)
                      ..+...  ....+..+++++.+++.|...++.+++++|+++|++||+++++||+++++...+..+.........+..+++
T Consensus       117 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~g~~~~~D~a~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (343)
T d1m6sa_         117 KAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFC  196 (343)
T ss_dssp             HHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEE
T ss_pred             HhhhhhhcccccccccccccccccCCceecCHHHHHHHHHHHHhcCeEEEeccccccccccccccchhhhcccccccccc
Confidence            554332  123466677777666666667788999999999999999999999998664443333332222234455566


Q ss_pred             hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc
Q 010250          340 KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS  419 (514)
Q Consensus       340 K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~  419 (514)
                      |..+.|+.+.++++..++.+.......    . ..+++.......+  +.................++..++.+.+.++.
T Consensus       197 ~~~~~~g~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~--a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (343)
T d1m6sa_         197 LSKGLCAPVGSVVVGDRDFIERARKAR----K-MLGGGMRQAGVLA--AAGIIALTKMVDRLKEDHENARFLALKLKEIG  269 (343)
T ss_dssp             SSSTTCCSSCEEEEECHHHHHHHHHHH----H-HHTCCCSSTHHHH--HHHHHHHHHSSTTHHHHHHHHHHHHHHHHHHT
T ss_pred             ccccccccccccccccHHHHhhhHhhC----c-ccccccchhHHHH--HhhhhhhhhhHHHHHHHHHHHHHhhhHHHHhc
Confidence            544444467888888888766554311    1 1223333322222  22222222233445566666677777776652


Q ss_pred             CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250          420 DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-GDNIMMSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       420 ~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-g~~iRi~p~~~~t~e~id~~~~~l~~  498 (514)
                      .......+  ...++.+.+.+...          ....+.+.|+++||++++. .+.+||++++.+|+||||+++++|++
T Consensus       270 ~~~~~~~~--~~~~v~~~~~~~~~----------~a~~l~~~L~~~Gi~v~~~~~~~iRi~~~~~~t~edid~~v~~l~~  337 (343)
T d1m6sa_         270 YSVNPEDV--KTNMVILRTDNLKV----------NAHGFIEALRNSGVLANAVSDTEIRLVTHKDVSRNDIEEALNIFEK  337 (343)
T ss_dssp             CBCCGGGC--CSSEEEEECTTSSS----------CHHHHHHHHHHHTEECEEEETTEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             cCccCCCC--CceEEEEEeCCCcc----------cHHHHHHHHHHCCCEEecCCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence            21111111  23455665543221          1556889999999999875 46799999999999999999999999


Q ss_pred             HHHHH
Q 010250          499 ALKAT  503 (514)
Q Consensus       499 ~l~~~  503 (514)
                      +++++
T Consensus       338 v~~~~  342 (343)
T d1m6sa_         338 LFRKF  342 (343)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            99875

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=2.8e-22  Score=202.87  Aligned_cols=339  Identities=16%  Similarity=0.144  Sum_probs=207.9

Q ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHH
Q 010250           97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEAN  175 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~  175 (514)
                      .+|+++|||..|..  .|. .+|.|++|+.+.+++..+.+....+..+....+++.+.+..+ ....+++++++++++|+
T Consensus        28 ~~G~~vi~l~~g~p--~~~-~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lR~~ia~~~~~~~~~~~~~~~i~it~G~~~al  104 (382)
T d1b5pa_          28 RQGVDLVALTAGEP--DFD-TPEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQAL  104 (382)
T ss_dssp             HTTCCCEECCCSSC--SSC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHH
T ss_pred             hCCCCeEECCCCCC--CCC-CCHHHHHHHHHHHhcCCcCCCCCCCCHHHHHHHHhhhhhhcccccccccceecCCHHHHH
Confidence            46788999987742  233 578999999999876433222122233444555555544432 23568999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      ..+++...        ..++.|++.+++|.+........+. ...            .++....          +.+ ..
T Consensus       105 ~~~~~~l~--------~~gd~vl~~~P~y~~~~~~~~~~g~-~~~------------~v~~~~~----------~~~-~~  152 (382)
T d1b5pa_         105 FNLFQAIL--------DPGDEVIVLSPYWVSYPEMVRFAGG-VVV------------EVETLPE----------EGF-VP  152 (382)
T ss_dssp             HHHHHHHC--------CTTCEEEEEESCCTHHHHHHHHTTC-EEE------------EEECCGG----------GTT-CC
T ss_pred             HHHHHHhC--------CCCCEEEECCCCcHHHHHHHHHhcC-eEE------------EEecccc----------ccc-CC
Confidence            99998763        2346899999999987533322221 111            0110000          000 00


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCc-
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD-  334 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pD-  334 (514)
                      +++++++.+   .++..+.+++.| ++.+|.+ .+++.+++|.++|++||+++|.||+|..+...|+......  ..+| 
T Consensus       153 d~~~l~~~~---~~~~~~i~~~~P-~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~--~~~~~  225 (382)
T d1b5pa_         153 DPERVRRAI---TPRTKALVVNSP-NNPTGAV-YPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGR--VAPEH  225 (382)
T ss_dssp             CHHHHHTTC---CTTEEEEEEESS-CTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGG--TCTTT
T ss_pred             CHHHHHHhC---CCCCeEEEECCC-CCCcchh-CCHHHHHHHHHHHHHcCeEEEEEccccceecCCCCCCHHH--cCCCC
Confidence            134554443   334445666667 5556644 5678999999999999999999999998865565432211  2233 


Q ss_pred             hh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH---Hhh--ccHHHHHHH
Q 010250          335 LV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI---YKE--RNIVEQVNK  406 (514)
Q Consensus       335 iv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~---~~~--~~~~~~~~~  406 (514)
                      ++   ++||.++-.++++|++++++++++.+...       ....+.+.+.....++.+++..   .+.  +...+.++.
T Consensus       226 ~i~~~s~SK~~~~~GlR~G~~~~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (382)
T d1b5pa_         226 TLTVNGAAKAFAMTGWRIGYACGPKEVIKAMASV-------SRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRR  298 (382)
T ss_dssp             EEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHH-------HHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecchhhccCcHhheEEEEECHHHHHHHHHH-------HHhcccCcccccccccccccccccchhHHHHHHHHHHHh
Confidence            22   58998873338999999999998877531       1122333444444444433321   111  123455566


Q ss_pred             HHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeC
Q 010250          407 IAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSP  480 (514)
Q Consensus       407 ~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p  480 (514)
                      +.+.+.+.++.. ...   .+.+. |.++++++.....          ....+.+.|+++||++.|+     .+.+||+ 
T Consensus       299 ~~~~~~~~l~~~-g~~---~~~p~gg~~~~~~~~~~~~----------~~~~~~~~l~e~gV~v~PG~~F~~~~~iRis-  363 (382)
T d1b5pa_         299 RRDLLLEGLTAL-GLK---AVRPSGAFYVLMDTSPIAP----------DEVRAAERLLEAGVAVVPGTDFAAFGHVRLS-  363 (382)
T ss_dssp             HHHHHHHHHHHH-TCC---BCCCSBTTEEEEECTTTCS----------SHHHHHHHHHHTTEECEESGGGTCTTEEEEE-
T ss_pred             hhhHHHHHHhhc-CCe---EecCCceEEEeEeCCCCCC----------CHHHHHHHHHHCCEEEEeCcccCCCCeEEEE-
Confidence            666666666654 111   12233 5566777643221          1455778899999999985     2579999 


Q ss_pred             CCCCCHHHHHHHHHHHHHHH
Q 010250          481 PFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       481 ~~~~t~e~id~~~~~l~~~l  500 (514)
                       +..++|+|++++++|.++|
T Consensus       364 -~~~~~e~l~~al~rl~~~L  382 (382)
T d1b5pa_         364 -YATSEENLRKALERFARVL  382 (382)
T ss_dssp             -CCSCHHHHHHHHHHGGGGC
T ss_pred             -EcCCHHHHHHHHHHHHHhC
Confidence             6778999999999988753

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=3.4e-24  Score=222.90  Aligned_cols=368  Identities=13%  Similarity=0.126  Sum_probs=216.8

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQ  178 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~A  178 (514)
                      ++.|||+.|.+++....       +++...+..+.   ..|+ -.+...+|++++++++   +.+.++|++||++||+.|
T Consensus        40 ~~~~idl~sd~~t~~~~-------~~~~a~~~~gd---~~Y~-~~~~~~~le~~~a~l~---G~~~~~~~~sGt~A~~~a  105 (467)
T d2v1pa1          40 EDVFIDLLTDSGTGAVT-------QSMQAAMMRGD---EAFS-GSRSYYALAESVKNIF---GYQYTIPTHQGRGAEQIY  105 (467)
T ss_dssp             GGCSEECSCCTTCSCCC-------HHHHHHTTSCC---CCSS-SCHHHHHHHHHHHHHT---CCSEEEEECSSTTTHHHH
T ss_pred             cceeeeccccccchhhH-------HHHHhhccccc---hhhc-CCchHHHHHHHHHHHH---CCCEEEECCCCHHHHHHH
Confidence            45578888776543222       12222222221   1222 3456689999999998   567999999999999999


Q ss_pred             HHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250          179 VKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN  258 (514)
Q Consensus       179 lk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (514)
                      ++++..+.......++..++...+.||+.+.+....+|.....-..    +.......+..           .....+.+
T Consensus       106 ~~~~~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~G~~~~~~~~----~~~~~~~~~~~-----------~~~~~d~~  170 (467)
T d2v1pa1         106 IPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYI----KEAFDTGVRYD-----------FKGNFDLE  170 (467)
T ss_dssp             HHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBC----TTTTCTTSCCT-----------TTTCBCHH
T ss_pred             HHHHhhccceEecCCCCcEEEEecccccccHHHHHHcCCeeeeccc----ccccccccccc-----------cccCCCHH
Confidence            9999877655444566778888999999887777777643211000    00000000000           01122368


Q ss_pred             HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcC---cccccccceecccC-----
Q 010250          259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICA---FGRLGTMFGCDKYS-----  330 (514)
Q Consensus       259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG---~gr~G~~~~~~~~g-----  330 (514)
                      +|++.+....++.++++++|++++++|..+++.++|++|+++|++||++||+|+++..   ++..+..+.....+     
T Consensus       171 ~l~~~i~~~~~~~~~~i~~e~~~~~~gg~~~~~~~l~~i~~ia~~~g~~l~~D~a~~~~~~~~~~~~~~~~~~~~~~~i~  250 (467)
T d2v1pa1         171 GLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQIT  250 (467)
T ss_dssp             HHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHH
T ss_pred             HHHHHHhhcCccccceeeecceeeccccccCCHHHHHHHHHHHHHcCCEEEEechhhhccccccccccccccCCcccccc
Confidence            8999998887788999999999999988999999999999999999999999999861   11111112222221     


Q ss_pred             ----CCCchhchhhhhcCCccccee-EEeCHH-HHHHhhhccCCCCcccccCCCCCcHHHHHHHHH-HHHHHhhccHHHH
Q 010250          331 ----IKPDLVSFAKALSSAYMPIGA-ILVSPE-VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIE-ALKIYKERNIVEQ  403 (514)
Q Consensus       331 ----v~pDiv~~sK~l~gG~~pig~-v~~~~~-i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~a-al~~~~~~~~~~~  403 (514)
                          -..|++++++.-+++ .|.|+ ++.+++ +...............++.++.+.+..++++.+ .+.....++..++
T Consensus       251 ~~~~~~~d~~s~s~~K~~~-~~~gg~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  329 (467)
T d2v1pa1         251 RETYKYADMLAMSAKKDAM-VPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAY  329 (467)
T ss_dssp             HHHGGGCSEEEEESSSTTC-CSSCEEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             hhhcccCCEEEecCCCCCC-CCCceeEEecchhhhhHHHhhcccccccccCcchhhhHHHHHHHHHHHhHHhhhHHHHHH
Confidence                235777776543333 24444 444443 332222100000112334455555554444443 3444444577888


Q ss_pred             HHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe------------
Q 010250          404 VNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV------------  471 (514)
Q Consensus       404 ~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~------------  471 (514)
                      ..++.++|.++|.+. .. .+....+.+.+......-.....    ..........+.+.+.|+....            
T Consensus       330 ~~~~~~~l~~~L~~~-~~-~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ll~~~Gi~~~~~g~~~~~~~~~~  403 (467)
T d2v1pa1         330 RIAQVQYLVDGLEEI-GV-VCQQAGGHAAFVDAGKLLPHIPA----DQFPAQALACELYKVAGIRAVEIGSFLLGRDPKT  403 (467)
T ss_dssp             HHHHHHHHHHHHHHT-TC-CEEEECSSCEEEEHHHHSTTSCG----GGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTT
T ss_pred             HHHHHHHHHHHHHhc-CC-cccCCCccceeecchhhcCCcch----hhhhhHHHHHHHHHHcCCeeeccccccccccccc
Confidence            889999999999875 21 12222222222111111011000    1111122234455677775431            


Q ss_pred             ------eCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHH
Q 010250          472 ------SGDNIMMSPP-FIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       472 ------~g~~iRi~p~-~~~t~e~id~~~~~l~~~l~~  502 (514)
                            ..+.|||++| ..+|+||||+++++|+++++.
T Consensus       404 ~~~~~~~~~~vRlaip~~~~T~eeiD~vv~~l~~v~~~  441 (467)
T d2v1pa1         404 GKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN  441 (467)
T ss_dssp             CSBCCCSCCEEEECCCTTTCCHHHHHHHHHHHHHHHHT
T ss_pred             CCccCCCcceEEEecCCCCCCHHHHHHHHHHHHHHHHH
Confidence                  1246999866 577999999999999998864

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=99.89  E-value=4.5e-22  Score=201.73  Aligned_cols=344  Identities=13%  Similarity=0.094  Sum_probs=213.6

Q ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHH
Q 010250           97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEAN  175 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~  175 (514)
                      .+|+.+|||..|..  .|. .+|.|++|+.+.++...+.+....+..+....+++++.+..+ ....++|++++++++|+
T Consensus        27 ~~g~~vi~l~~G~p--~~~-~p~~v~~a~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~~~i~it~G~~~al  103 (388)
T d1j32a_          27 AEGIDVCSFSAGEP--DFN-TPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSI  103 (388)
T ss_dssp             TTTCCCEECCCSSC--SSC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHH
T ss_pred             HCCCCeEECCCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCCceEEEcCCHHHHH
Confidence            35778899987732  232 578999999999876432222112233444555555555442 23567899999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      ..+++...        ..++.|++.+++|.+.........+....             ++....          +.+ ..
T Consensus       104 ~~~~~~~~--------~~gd~Vlv~~P~y~~~~~~~~~~~~~~v~-------------~~~~~~----------~~~-~~  151 (388)
T d1j32a_         104 FNLMLAMI--------EPGDEVIIPAPFWVSYPEMVKLAEGTPVI-------------LPTTVE----------TQF-KV  151 (388)
T ss_dssp             HHHHHHHC--------CTTCEEEEESSCCTHHHHHHHHTTCEEEE-------------ECCCGG----------GTT-CC
T ss_pred             HHHHHHHh--------CCCCEEEEcCCCcHHHHHHHHHhcCeEEE-------------Eecccc----------ccc-CC
Confidence            99987663        33578999999998864333222221110             000000          000 01


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCC--
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP--  333 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~p--  333 (514)
                      +.+++++.+.   ++....+++.| +|.+|.+ .+++.+++|.++|++||+++|.||+|..+...+..... .....+  
T Consensus       152 d~~~l~~~~~---~~~~~~~~~~P-~NPTG~~-~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s-~~~~~~~~  225 (388)
T d1j32a_         152 SPEQIRQAIT---PKTKLLVFNTP-SNPTGMV-YTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLS-IGAASPEA  225 (388)
T ss_dssp             CHHHHHHHCC---TTEEEEEEESS-CTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCC-GGGSCHHH
T ss_pred             CHHHHHHhCC---CCCeEEEECCC-CCCCCcc-cchhhhhhhhcccccCCeEEEchhhhhcccccCCCCCC-HHHhCccc
Confidence            1456665543   34556667777 4556654 46789999999999999999999999877554432211 011111  


Q ss_pred             ---c--hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHH
Q 010250          334 ---D--LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNK  406 (514)
Q Consensus       334 ---D--iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~  406 (514)
                         .  +-+|||.++-.++++|++++++++++.+...       ........+..++.++...++..++  ++..+.+++
T Consensus       226 ~~~~i~~~S~SK~~~~~GlRvG~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~  298 (388)
T d1j32a_         226 YERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAATKI-------QGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAE  298 (388)
T ss_dssp             HHTEEEEEESTTTTTCTTTCCEEEECCHHHHHHHHHH-------HHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHH
T ss_pred             ccceeEecCChhhhhcchhHeEEEEECHHHHHHHHHh-------hhhccccccHHHHHHHhhcccchHHHHHHHHHHHHH
Confidence               1  2268998874338999999999998877631       1223445566666666665542211  234566667


Q ss_pred             HHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-----CCEEEEe
Q 010250          407 IAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-----GDNIMMS  479 (514)
Q Consensus       407 ~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-----g~~iRi~  479 (514)
                      +.+.+.+.|+++   +.+...... |.++++++.....          ....++++|+ ++||.+.|+     .+++|++
T Consensus       299 ~~~~~~~~l~~~---~g~~~~~p~gg~~l~~~l~~~~~----------~~~~~~~~ll~~~gV~v~pG~~F~~~~~~Rls  365 (388)
T d1j32a_         299 RRRYMLDALNAM---PGLECPKPDGAFYMFPSIAKTGR----------SSLDFCSELLDQHQVATVPGAAFGADDCIRLS  365 (388)
T ss_dssp             HHHHHHHHHHTC---TTCBCCCCCBTTEECCBCGGGTC----------CHHHHHHHHHHHHCEECEEGGGGTCTTBEEEE
T ss_pred             HHHHHHHHHHhC---CCCEecCCCceEEEEEECCCCCC----------CHHHHHHHHHHhCCEEEEeccccCCCCeEEEE
Confidence            777777777665   222222333 4455666543221          1334666654 679999875     3579999


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                        +..++++|++++++|+++++.+
T Consensus       366 --~~~~~e~l~~al~rl~~~l~~l  387 (388)
T d1j32a_         366 --YATDLDTIKRGMERLEKFLHGI  387 (388)
T ss_dssp             --CCSCHHHHHHHHHHHHHHHHHH
T ss_pred             --EeCCHHHHHHHHHHHHHHHHHh
Confidence              6679999999999999999865

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.89  E-value=3.2e-22  Score=197.07  Aligned_cols=327  Identities=14%  Similarity=0.073  Sum_probs=188.1

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVK  180 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk  180 (514)
                      .+|||.|.   ++.| .||+|++|+.++.....    ...+..+...+++++++++++.  ...++|++||||||+.|++
T Consensus         3 ~~~~f~s~---n~~g-~~P~v~~A~~~a~~~~~----~~~~~~~~~~~l~~~la~~~g~--~~~v~f~~sGt~An~~a~~   72 (345)
T d1v72a1           3 PALGFSSD---NIAG-ASPEVAQALVKHSSGQA----GPYGTDELTAQVKRKFCEIFER--DVEVFLVPTGTAANALCLS   72 (345)
T ss_dssp             CCCBCSCG---GGCC-CCHHHHHHHHHTTSSCC----CSTTCSHHHHHHHHHHHHHHTS--CCEEEEESCHHHHHHHHHH
T ss_pred             CCcCcCCC---CCCC-CCHHHHHHHHHHhccCc----cccCCCHHHHHHHHHHHHHHCC--CcEEEECCchHHHHHHHHH
Confidence            36899875   4455 69999999988654311    1123567778999999999853  2468999999999999998


Q ss_pred             HHHHHHhhcCCCCccEEEEEecCCcccceeee---ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          181 LVWYYNNALGRPNKKKFIARQKSYHGSTLIAA---SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       181 ~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~---~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      .++        .....++. ....|.......   ..++...            ..+.  +.+           ....+.
T Consensus        73 ~~~--------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------------~~~~--~~~-----------~~~~~~  118 (345)
T d1v72a1          73 AMT--------PPWGNIYC-HPASHINNDECGAPEFFSNGAK------------LMTV--DGP-----------AAKLDI  118 (345)
T ss_dssp             TSC--------CTTEEEEE-CTTSHHHHSSTTHHHHHTTSCE------------EEEC--CCG-----------GGCCCH
T ss_pred             HHH--------hcCCcccc-ccccceeeechhhHHHhcCccc------------cccc--ccc-----------cccccH
Confidence            764        22233333 222333211111   1111100            0000  000           001114


Q ss_pred             HHHHHHHHHh--CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC--C
Q 010250          258 NNLEDLILKE--GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK--P  333 (514)
Q Consensus       258 ~~le~li~~~--~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~--p  333 (514)
                      +++++.+...  ......++++++++++.+...++.++++++.++|++||+++++|++|+++++.+...........  +
T Consensus       119 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~  198 (345)
T d1v72a1         119 VRLRERTREKVGDVHTTQPACVSITQATEVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGV  198 (345)
T ss_dssp             HHHHHHTTSSTTCTTSCEEEEEEEESSCTTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTC
T ss_pred             HHhhhhhcccccccccccceeeeeeccccccccccchhhhhHHHHHHhcCceeeecccccceeccccccCHHHhhccccc
Confidence            6666665432  11345666777777666666777889999999999999999999999977666554444433333  4


Q ss_pred             chhchhhhhcCCcccceeEEe-CHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHH
Q 010250          334 DLVSFAKALSSAYMPIGAILV-SPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAP  409 (514)
Q Consensus       334 Div~~sK~l~gG~~pig~v~~-~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~  409 (514)
                      +..+++|..+++ ...+.... ...........     ....+++......++   .+++..+.+   .....+..++.+
T Consensus       199 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~aa---~~~~~~~~~~~~~~~~~~~~~~~~  269 (345)
T d1v72a1         199 DALSFGATKNGV-LAAEAIVLFNTSLATEMSYR-----RKRAGHLSSKMRFLS---AQIDAYLTDDLWLRNARKANAAAQ  269 (345)
T ss_dssp             CEEEECCGGGTC-SSCEEEEESSGGGHHHHHHH-----HHHTTCCCSSTHHHH---HHHHHHTSTTHHHHHHHHHHHHHH
T ss_pred             cccccCcccccc-ccccccccchhhhhhhcccc-----ccccccccchhhHHh---hhhHHHHHHhhhhhhccchhhHHH
Confidence            455666666655 34444444 33333332211     111222222222222   222332222   223344445555


Q ss_pred             HHHhhhhhccCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---CCEEEEeCCCCCC
Q 010250          410 KFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---GDNIMMSPPFIMS  485 (514)
Q Consensus       410 ~l~~~L~~l~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---g~~iRi~p~~~~t  485 (514)
                      ++.+.+.++   +.+.... ..+.++.+.+.                ..+.+.|+++|+.+...   .+.|||+++..+|
T Consensus       270 ~~~~~l~~~---~g~~~~~p~~~niv~~~~~----------------~~~~~~L~~~gi~v~~~~~~~~~lR~~~~~~~T  330 (345)
T d1v72a1         270 RLAQGLEGL---GGVEVLGGTEANILFCRLD----------------SAMIDALLKAGFGFYHDRWGPNVVRFVTSFATT  330 (345)
T ss_dssp             HHHHHHTTC---TTEEEESCCCSSEEEEEEC----------------HHHHHHHHHTTCBCBCSSSSTTEEEEECCTTCC
T ss_pred             HHHHHHHhc---CCcEeccCCCccEEEEEcC----------------HHHHHHHHHcCCCccccCCCCCEEEEECCCCCC
Confidence            555555544   4333221 22345555543                13568899999987532   3579999999999


Q ss_pred             HHHHHHHHHHHHHH
Q 010250          486 PEEVDELISKYGKA  499 (514)
Q Consensus       486 ~e~id~~~~~l~~~  499 (514)
                      +||||+++++|+++
T Consensus       331 ~edid~~le~lr~a  344 (345)
T d1v72a1         331 AEDVDHLLNQVRLA  344 (345)
T ss_dssp             HHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHh
Confidence            99999999999875

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.87  E-value=6.3e-21  Score=193.06  Aligned_cols=339  Identities=12%  Similarity=0.095  Sum_probs=205.5

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC--cCCCCeEEEeCChhHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT--ASKMAKVFFTNSGSEANDT  177 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~--~~~~~~v~~~~sGseA~~~  177 (514)
                      +.+|||..|..  .++ .++.|++++.+++++....+....+..+....+++++.....  ....++|++++++++++..
T Consensus        25 ~dvi~l~~g~p--~~~-~p~~v~~~~~~a~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~~t~G~~~~l~~  101 (388)
T d1gdea_          25 KDVISLGIGEP--DFD-TPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLM  101 (388)
T ss_dssp             TTCEECCCCSC--CSC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHH
T ss_pred             CCeEECCCCCC--CCC-CCHHHHHHHHHHHhcCccCCCCCcCCHHHHHHHHHHHHhhccccCCChheeeeccCcchHHHH
Confidence            45788876632  244 578999999999876432222112233444444555443322  1244679999999999999


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC--CCcccCCCCCCChhHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC--PHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  255 (514)
                      ++....        ..++.|++.+++|.+........+.....             ++.  .+.|+             .
T Consensus       102 ~~~~l~--------~~gd~vlv~~P~y~~~~~~~~~~g~~~~~-------------~~~~~~~~~~-------------~  147 (388)
T d1gdea_         102 GLSAFL--------KDGEEVLIPTPAFVSYAPAVILAGGKPVE-------------VPTYEEDEFR-------------L  147 (388)
T ss_dssp             HHTTTC--------CTTCEEEEEESCCTTHHHHHHHHTCEEEE-------------EECCGGGTTC-------------C
T ss_pred             HHHHhc--------CCCCEEEECCCCcHHHHHHHHHcCCEEEE-------------eecccccCCC-------------C
Confidence            887552        33578999999998875444333221110             010  00111             0


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-eecccCCCCc
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GCDKYSIKPD  334 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~~~~gv~pD  334 (514)
                      ++++|++.+.   ++....++..| +|.+|.+ .+++.+++|.++|++||+++|.||+|..|...+... ....+...++
T Consensus       148 d~~~l~~~~~---~~~~~i~~~~P-~NPtG~~-~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~  222 (388)
T d1gdea_         148 NVDELKKYVT---DKTRALIINSP-CNPTGAV-LTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFE  222 (388)
T ss_dssp             CHHHHHHHCC---TTEEEEEEESS-CTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGG
T ss_pred             CHHHHHHhCc---cCCeEEEECCC-cCCCCCc-CCHHHHHHHHHHHHHcCCEEEEEcCChhhhhccCCCCChhhccCCCC
Confidence            1466666553   33445555566 4556654 467899999999999999999999999775444322 2222222223


Q ss_pred             -hh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh----ccHHHHHHH
Q 010250          335 -LV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE----RNIVEQVNK  406 (514)
Q Consensus       335 -iv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~----~~~~~~~~~  406 (514)
                       ++   +|||.++-.++++|++++++++++.+...       ....+...+.....++.++++....    +....++++
T Consensus       223 ~~i~~~S~SK~~~~~GlR~G~ii~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  295 (388)
T d1gdea_         223 RTITVNGFSKTFAMTGWRLGFVAAPSWIIERMVKF-------QMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDR  295 (388)
T ss_dssp             GEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHHH-------HHTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred             eEEEEeCChhhccCccccEEEEEeeccchhhhhhc-------cccccccccccchhhHHHHHhhccchhHHHHHHHHHHH
Confidence             22   68998873338999999999988877642       2223444555555555555532111    223445555


Q ss_pred             HHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEE
Q 010250          407 IAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIM  477 (514)
Q Consensus       407 ~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iR  477 (514)
                      ....+.+.|... ..+.   +.+. |.++++++.+...          ....+++.|+ +.||.+.|+       .+++|
T Consensus       296 ~~~~~~~~l~~~-~~~~---~~p~gg~fl~~~l~~~~~----------~~~~~~~~ll~e~gV~v~PG~~F~~~~~~~iR  361 (388)
T d1gdea_         296 RRKLVWKRLNEM-GLPT---VKPKGAFYIFPRIRDTGL----------TSKKFSELMLKEARVAVVPGSAFGKAGEGYVR  361 (388)
T ss_dssp             HHHHHHHHHHHT-TCCC---CCCCBTTEECCBCGGGTC----------CHHHHHHHHHHHTCEECEEGGGGCGGGTTBEE
T ss_pred             hhhhhhhhhhhc-cccc---cCCCceEEEEEECCCCCC----------CHHHHHHHHHHhCCEEEEechhhCCCCCCEEE
Confidence            666666666554 1111   2223 4566666654221          1445666654 679999874       25699


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ++  +..++|++++++++|++++++.
T Consensus       362 is--~~~~~e~l~~al~rL~~~l~e~  385 (388)
T d1gdea_         362 IS--YATAYEKLEEAMDRMERVLKER  385 (388)
T ss_dssp             EE--CCSCHHHHHHHHHHHHHHHHHT
T ss_pred             EE--ecCCHHHHHHHHHHHHHHHHhc
Confidence            99  6788999999999999998753

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=99.86  E-value=1.2e-20  Score=188.64  Aligned_cols=324  Identities=14%  Similarity=0.144  Sum_probs=202.8

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDT  177 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~  177 (514)
                      ....+|||.+|  .+++| -+|.+++|+.+.+..+..|      +.....+|.+.|+++++ .+.++|++++++.+++..
T Consensus        20 ~p~~~idls~~--~np~~-~p~~~~~a~~~~~~~~~~Y------p~~~~~~Lr~aia~~~~-v~~~~I~~~~g~~~~~~~   89 (355)
T d1lc5a_          20 SPDQLLDFSAN--INPLG-MPVSVKRALIDNLDCIERY------PDADYFHLHQALARHHQ-VPASWILAGNGETESIFT   89 (355)
T ss_dssp             CGGGSEECSSC--CCTTC-CCHHHHHHHHHTGGGGGSC------CCTTCHHHHHHHHHHHT-SCGGGEEEESSHHHHHHH
T ss_pred             ChhheEEccCC--CCCCC-CCHHHHHHHHHHHHHhccC------CCCChHHHHHHHHHHhC-CCHHHEEecccHHHHHHH
Confidence            34468999876  36788 4788999999988765433      22223578888888874 456789999988888777


Q ss_pred             HHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHH
Q 010250          178 QVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLA  257 (514)
Q Consensus       178 Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (514)
                      ++.+.         .+ ..+++..+.|+........... ..            ..++++....+...            
T Consensus        90 ~~~~~---------~~-~~~~v~~p~~~~~~~~~~~~~~-~~------------~~v~~~~~~~~~~~------------  134 (355)
T d1lc5a_          90 VASGL---------KP-RRAMIVTPGFAEYGRALAQSGC-EI------------RRWSLREADGWQLT------------  134 (355)
T ss_dssp             HHHHH---------CC-SEEEEEESCCTHHHHHHHHTTC-EE------------EEEECCGGGTTCCC------------
T ss_pred             HHhhh---------cc-ccccccCCccceeccccccccc-cc------------eeeeeeccCCccce------------
Confidence            66544         23 3455667777665332222111 11            11111111000000            


Q ss_pred             HHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchh-
Q 010250          258 NNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLV-  336 (514)
Q Consensus       258 ~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv-  336 (514)
                      +.+++   ...++..+.+++.| ++.+|.+. +.+.+++|.++|++|++++|.||++..|...+..... .....+.++ 
T Consensus       135 ~~~~~---~~~~~~~~v~l~nP-~NPtG~~~-~~e~l~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~-~~~~~~~~i~  208 (355)
T d1lc5a_         135 DAILE---ALTPDLDCLFLCTP-NNPTGLLP-ERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIP-ALKDNPHIWV  208 (355)
T ss_dssp             TTHHH---HCCTTCCEEEEESS-CTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGG-GCTTCTTEEE
T ss_pred             eeeee---ccccccceeeeecc-cCcccccc-hhhhhhhhhhhccccccccccccceeeeeeecccccc-ccccccccee
Confidence            11222   22333344555555 66677654 6789999999999999999999999877555432221 112223333 


Q ss_pred             --chhhhhcCCcccceeEEeCHHH-HHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHH
Q 010250          337 --SFAKALSSAYMPIGAILVSPEV-SEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK-ERNIVEQVNKIAPKFQ  412 (514)
Q Consensus       337 --~~sK~l~gG~~pig~v~~~~~i-~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~-~~~~~~~~~~~~~~l~  412 (514)
                        ++||+++-+++++|+++++++. ...+..         +..++..+.+++.++.++|+... -.+..+++++..+++.
T Consensus       209 ~~S~SK~~~l~GlR~G~~i~~~~~~~~~~~~---------~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~  279 (355)
T d1lc5a_         209 LRSLTKFYAIPGLRLGYLVNSDDAAMARMRR---------QQMPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFY  279 (355)
T ss_dssp             EEESTTTTTCTTTCCEEEECCCHHHHHHHHH---------HSCTTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred             ecccccccccccccccceeccchhhhHHHHh---------hcCCccccccccccccccccccchhHHHHHHHHHHHHHHH
Confidence              6899887333899999997654 444442         22456777888888888775321 1234556667777777


Q ss_pred             hhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-------CCEEEEeCCCCCC
Q 010250          413 DGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-------GDNIMMSPPFIMS  485 (514)
Q Consensus       413 ~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-------g~~iRi~p~~~~t  485 (514)
                      +.|.++   +......+.|.++.+.+..+.             ..+++.|+++||+++++       .++|||+.   .+
T Consensus       280 ~~l~~~---~~~~~~p~~~~f~~~~~~~~~-------------~~~~~~L~~~gv~vr~~~~f~~~~~~~iRis~---~~  340 (355)
T d1lc5a_         280 QALCQL---PLLTVYPGRANYLLLRCERED-------------IDLQRRLLTQRILIRSCANYPGLDSRYYRVAI---RS  340 (355)
T ss_dssp             HHHHTS---TTEEECCCSSSEEEEEESCTT-------------CCHHHHHHTTTEECEECTTSTTCCTTEEEEEC---CC
T ss_pred             HHHhhc---CCcEECCCCCEEEEEECCCCH-------------HHHHHHHHHCCcEEEeCccCCCCCCCEEEEEe---CC
Confidence            777665   333333445667777775321             12678899999999864       25799993   48


Q ss_pred             HHHHHHHHHHHHHHH
Q 010250          486 PEEVDELISKYGKAL  500 (514)
Q Consensus       486 ~e~id~~~~~l~~~l  500 (514)
                      ++|+++++++|+++|
T Consensus       341 ~~e~~~li~aL~~il  355 (355)
T d1lc5a_         341 AAQNERLLAALRNVL  355 (355)
T ss_dssp             HHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHHhC
Confidence            999999999988764

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=99.86  E-value=8e-21  Score=192.85  Aligned_cols=350  Identities=12%  Similarity=0.082  Sum_probs=208.8

Q ss_pred             CCCCEEEEccCCcccccCCC-CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHH
Q 010250           97 VNGKKYLDSLAGLWCTALGG-SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEA  174 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh-~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA  174 (514)
                      .+|+++||+..|.... ..+ .++.|++|+.+.++...+.+....+..+....+++.+.+.++ ....+++++++++.++
T Consensus        27 ~~G~~vi~l~~G~P~~-~df~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~i~i~~G~~~~  105 (395)
T d1xi9a_          27 KKGIKVIRLNIGDPVK-FDFQPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEA  105 (395)
T ss_dssp             HTTCCCEECCCCCGGG-TTCCCCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHH
T ss_pred             HCCCCeEECCCCCCCC-CCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhcccccccccccccccccchh
Confidence            3688899998774321 233 577899999999976433222222344455556666665543 2356789999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      +..+++...        ..++.|++.+++|++........+......       +.    ...+.|.             
T Consensus       106 ~~~~~~~~~--------~~Gd~vlv~~P~y~~~~~~~~~~g~~~v~v-------~~----~~~~~~~-------------  153 (395)
T d1xi9a_         106 LQLIFGALL--------DPGDEILVPGPSYPPYTGLVKFYGGKPVEY-------RT----IEEEDWQ-------------  153 (395)
T ss_dssp             HHHHHHHHC--------CTTCEEEEEESCCHHHHHHHHHTTCEEEEE-------EE----EGGGTSE-------------
T ss_pred             hhhhhhhhc--------CCCCEEEEcCCccccchhhhhhcCCEEEEE-------ec----ccccccc-------------
Confidence            999887763        335689999999988654433333221110       00    0000011             


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCc
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPD  334 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pD  334 (514)
                      .+.+++++.+   .++....+++.| ++.+|.+ .+++.+++|.++|++||+++|.||++..+...+.........-...
T Consensus       154 ~d~~~~~~~~---~~~~~~v~l~~P-~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~  228 (395)
T d1xi9a_         154 PDIDDIRKKI---TDRTKAIAVINP-NNPTGAL-YDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVP  228 (395)
T ss_dssp             ECHHHHHHHC---CTTEEEEEEESS-CTTTCCC-CCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSC
T ss_pred             chHHHHHHhh---cccccEEEecCC-CCCccch-hhHHHHHHHHhhhhhcCeeEEeccccccccccccccchhhcCCCCC
Confidence            0134454443   334456666666 5566654 4678999999999999999999999987644433222111111122


Q ss_pred             hh---chhhhhcCCcccceeEEeC--HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHH
Q 010250          335 LV---SFAKALSSAYMPIGAILVS--PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKI  407 (514)
Q Consensus       335 iv---~~sK~l~gG~~pig~v~~~--~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~  407 (514)
                      ++   +|||.++..++++|++++.  .+.+..+....    ......+.+.+.+++.++..+++..++  ++..+.++++
T Consensus       229 vi~~~S~SK~~~~~GlRvG~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~  304 (395)
T d1xi9a_         229 VIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAI----DRLARIRLCPNTPAQFAAIAGLTGPMDYLKEYMKKLKER  304 (395)
T ss_dssp             EEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHH----HHHHHHTCCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHH
T ss_pred             EEEEeCcchhcccchhhcEeeEecCHHHHHHHHHHHH----HHhhcCCCCcCHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence            33   6899887534999987642  22222221100    001123444555666666666642111  2345667777


Q ss_pred             HHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHH-HHHCCcEEEee-------CCEEEE
Q 010250          408 APKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVS-------GDNIMM  478 (514)
Q Consensus       408 ~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~-------g~~iRi  478 (514)
                      .+.+.+.|+++   +.+....+. |.++++++.......         ...++.. +.+.||++.|+       .+++||
T Consensus       305 ~~~l~~~L~~~---~~~~~~~p~gg~~~~~~l~~~~~~~---------~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~Ri  372 (395)
T d1xi9a_         305 RDYIYKRLNEI---PGISTTKPQGAFYIFPKIEVGPWKN---------DKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRA  372 (395)
T ss_dssp             HHHHHHHHHTS---TTEECCCCCBSSEECCEECSCSCSS---------HHHHHHHHHHHHCEECEEGGGGCGGGTTBEEE
T ss_pred             HHHHHHHHHhC---CCceecCCCeeEEEeEECCCCCCCC---------HHHHHHHHHHhCCEEEEcChhhCCCCCCEEEE
Confidence            78888888765   333323333 556677775432111         2334454 45679999874       246999


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      +  +..++|++++++++|++++++
T Consensus       373 s--~~~~~e~l~eal~rl~~~l~e  394 (395)
T d1xi9a_         373 V--FLPPIEILEEAMDRFEKFMKE  394 (395)
T ss_dssp             E--CCSCHHHHHHHHHHHHHHHHH
T ss_pred             E--ecCCHHHHHHHHHHHHHHHhc
Confidence            9  678899999999999999864

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.86  E-value=2e-20  Score=188.70  Aligned_cols=339  Identities=14%  Similarity=0.138  Sum_probs=211.2

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcC----CccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTL----PFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE  173 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~----~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse  173 (514)
                      +.+.|||..      ..|..+..|++|+.+.++..    ...........+...++.+.|+++++ .+.++|+|++|||+
T Consensus         6 ~~~~yld~~------~~~~~p~~v~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~-~~~~~i~~~~g~t~   78 (381)
T d1elua_           6 ANKTYFNFG------GQGILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFN-VDPNTITITDNVTT   78 (381)
T ss_dssp             TTSEECCTT------TCCCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTT-SCGGGEEEESSHHH
T ss_pred             CCCEEeeCC------cccCCCHHHHHHHHHHHHHhhcCCCccchhhHHHHHHHHHHHHHHHHHhC-CCcccEEEECChHH
Confidence            456788854      35667888999998877542    11111111122334456677888875 45678999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec---CCCccccCCCCCCCCcccccCCCCcccCCCCCCChh
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL---SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEE  250 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (514)
                      |+..++....       ..+++.|++.+..|++.......+   .|....            .++....    ..     
T Consensus        79 a~~~~~~~l~-------~~~g~~i~~~~~~~~s~~~~~~~~~~~~g~~~~------------~v~~~~~----~~-----  130 (381)
T d1elua_          79 GCDIVLWGLD-------WHQGDEILLTDCEHPGIIAIVQAIAARFGITYR------------FFPVAAT----LN-----  130 (381)
T ss_dssp             HHHHHHHHSC-------CCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEE------------EECCGGG----SS-----
T ss_pred             Hhhhcchhhh-------hcCCceEEEeccccceeeecccccccccccccc------------ccccccc----cc-----
Confidence            9999886541       134567888777776432111110   111110            0111000    00     


Q ss_pred             HHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc----CCEEEEechhcCccccccccee
Q 010250          251 EYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY----DILFIADEVICAFGRLGTMFGC  326 (514)
Q Consensus       251 ~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~----gillI~DEv~tG~gr~G~~~~~  326 (514)
                            .++.++.+.+...+++.++++..+++.+|.+.|    +++|.++|+++    |+++++|.+|+ +|..    ..
T Consensus       131 ------~~~~~~~l~~~i~~~t~~v~i~~~~n~tG~~~~----~~~I~~l~~~~~~~~~~~~~vD~~~~-~g~~----~~  195 (381)
T d1elua_         131 ------QGDAAAVLANHLGPKTRLVILSHLLWNTGQVLP----LAEIMAVCRRHQGNYPVRVLVDGAQS-AGSL----PL  195 (381)
T ss_dssp             ------SSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCC----HHHHHHHHHHCCSSSCCEEEEECTTT-BTTB----CC
T ss_pred             ------cchHHHHHHhhhcccccccccccccccccccch----hhHHHHHHhhcccccccccccccccc-cccc----cc
Confidence                  012222333333467889999999999999988    89999999984    69999999996 5433    23


Q ss_pred             cccCCCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCccccc---------------CCCCCcHHHHHHHH
Q 010250          327 DKYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHG---------------FTYSGHPVSCAVAI  389 (514)
Q Consensus       327 ~~~gv~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~---------------~t~~~~pl~~aaa~  389 (514)
                      +.....+|+++++  |.++++ .++|+++++++..+.+.+.....+.....               .....+.....+..
T Consensus       196 ~~~~~~~D~~~~s~~K~~~~p-~G~g~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~  274 (381)
T d1elua_         196 DFSRLEVDYYAFTGHKWFAGP-AGVGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLL  274 (381)
T ss_dssp             CTTTSCCSEEEEESSSTTCCC-TTCEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHH
T ss_pred             ccccccccccccccccccccc-chhhHHHhhHHHHHhcCcccccccccccccccccccccccccccccccccchhhhhhh
Confidence            3334457887655  999876 57899999998877665321100000000               01123344555566


Q ss_pred             HHHHHHhhc----cHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250          390 EALKIYKER----NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH  465 (514)
Q Consensus       390 aal~~~~~~----~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  465 (514)
                      ++++.+.+.    ...++..++.+++.++|+++....++......+.++.|.+....           ..+.+.+.|.++
T Consensus       275 ~a~~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~vsf~~~~~~-----------~~~~i~~~L~~~  343 (381)
T d1elua_         275 AALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSPL-----------GHRAIVQKLEEQ  343 (381)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECSSS-----------CHHHHHHHHHHT
T ss_pred             hhhhhHHHhcccccchhhhhhHHHHHHHHHhcCCCeEecCCCCccccEEEEEcCCCC-----------CHHHHHHHHHhC
Confidence            667666543    23567778888999999887332222222234556677664322           145688899999


Q ss_pred             CcEEEeeC--CEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250          466 GMLVRVSG--DNIMMSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       466 Gv~~~~~g--~~iRi~p~~~~t~e~id~~~~~l~~  498 (514)
                      ||.++..+  +.||+++...+|+||||++++.|++
T Consensus       344 gi~v~~~~~~~~lRis~~~~nt~edid~ll~~l~e  378 (381)
T d1elua_         344 RIYLRTIADPDCIRACCHYITDEEEINHLLARLAD  378 (381)
T ss_dssp             TEECEEETTTTEEEEECCTTCCHHHHHHHHHHHTT
T ss_pred             CcEEEecCCCCEEEEecCCCCCHHHHHHHHHHHHh
Confidence            99987654  6799999999999999999999875

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=99.86  E-value=3e-20  Score=188.97  Aligned_cols=354  Identities=12%  Similarity=0.113  Sum_probs=205.2

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc---cccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF---YHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEA  174 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~---~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA  174 (514)
                      +..+|||..|...-. -...+.+.+++.+.++....   .+....+..+....+++.+.+.++ ..+.++|++++++++|
T Consensus        28 ~~~~i~l~~G~P~~~-~~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~l~~~~g~~~~~~~I~it~G~~~a  106 (403)
T d1wsta1          28 TSDVISLAGGLPAPE-TFPVETIKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWMEKRYDIPMSKVEIMTVAGSQQA  106 (403)
T ss_dssp             SSSCEECCCCCCCGG-GSCHHHHHHHHHHHHHHSHHHHHSCCCSSCCHHHHHHHHHHHHHHHCCCCTTCEEEEESSHHHH
T ss_pred             CCCcEECCCCCCCcc-ccCHHHHHHHHHHHHHhCcccccCCCCCcCCHHHHHHHHHHHHHHhCCCCChHHeeecccchHH
Confidence            344677766532111 11233566677776644211   111112233444555666655443 2456899999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      +..++++..        ..++.|++.+++|..........+.. ..            .++...      .+.    ...
T Consensus       107 l~~~~~~l~--------~~gd~v~~~~P~y~~~~~~~~~~g~~-~~------------~v~~~~------~~~----~~~  155 (403)
T d1wsta1         107 LDLIGRVFL--------NPGDPIVVEAPTYLAAIQAFKYYDPE-FI------------SIPLDD------KGM----RVD  155 (403)
T ss_dssp             HHHHHHHHC--------CTTCEEEEEESCCHHHHHHHHTTCCE-EE------------EEEEET------TEE----CHH
T ss_pred             HHHHHHHHh--------hcCCccccCCCcchhhhHHHhhcccc-ce------------eEeecc------cCC----ccc
Confidence            999998763        34578999999998875433322211 10            000000      000    001


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-eccc---C
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKY---S  330 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~~---g  330 (514)
                      ......+....+.. ..+.++++.+.++.+|.+. +.+.+++|.++|++||+++|.||+|..|...|.... ....   +
T Consensus       156 ~~~~~~~~~~~~~~-~~~~~~~~~~p~NPtG~~~-s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~  233 (403)
T d1wsta1         156 LLEEKLEELRKQGK-RVKIVYTVSTFQNPAGVTM-SVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYG  233 (403)
T ss_dssp             HHHHHHHHHHHTTC-CCCEEEECCSSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSS
T ss_pred             cccccchhhhhccc-cccccccccccCCCCCccC-CHHHHHHHHHHHHhcCceeccccchhheecCCCCCCcccccCCCC
Confidence            11222333333332 3445555555566667554 668899999999999999999999998866654332 1111   1


Q ss_pred             CCCchhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh----ccHHHHHHH
Q 010250          331 IKPDLVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE----RNIVEQVNK  406 (514)
Q Consensus       331 v~pDiv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~----~~~~~~~~~  406 (514)
                      ...-+-++||.++.| +++|++++++++++.+...       ....+...+...+.+..+.++....    +.+.+.+..
T Consensus       234 ~~i~~~S~SK~~~~G-~RiG~~i~~~~~i~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (403)
T d1wsta1         234 RVIYLGTFSKILAPG-FRIGWVAAHPHLIRKMEIA-------KQSIDLCTNTFGQAIAWKYVENGYLDEHIPKIIEFYKP  305 (403)
T ss_dssp             CEEEEEESTTTTCGG-GCCEEEEECHHHHHHHHHH-------HHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred             cEEEEccccceecCc-ccccccccchHHHHHHHHH-------HhhhccccccchhhhHHhhhhccccchhHHHHHHHHHH
Confidence            111123689988655 8999999999998877531       1122334445554444433332111    234555666


Q ss_pred             HHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------CCEEE
Q 010250          407 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---------GDNIM  477 (514)
Q Consensus       407 ~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------g~~iR  477 (514)
                      +.+.+.+.|.+.....+......-|.++++++.+...           .+.+.+.|.++||++.|+         .+++|
T Consensus       306 ~~~~~~~~L~~~~~~~~~~~~p~gg~~~~~~~~~~~~-----------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iR  374 (403)
T d1wsta1         306 RRDAMLEALEEYMPEGVEWTKPEGGMFVRVTLPEGID-----------TKLMMERAVAKGVAYVPGEAFFVHRDKKNTMR  374 (403)
T ss_dssp             HHHHHHHHHHHHCCTTCEECCCSBSSEEEEECCTTCC-----------TTTTHHHHHHTTEECEEGGGGSTTCCCCSEEE
T ss_pred             HHHHHHHHHHhhccCCeEEeCCCceeEEEEECCCCCC-----------HHHHHHHHHHCCEEEEechhhcCCCCCCCEEE
Confidence            6666777776541111221222336677788765322           123668899999999874         14799


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGKALKATEER  506 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~~l~~~~~~  506 (514)
                      |+.. ..++++|++++++|.+++++..++
T Consensus       375 i~~~-~~~~~~l~~al~rl~~~l~~~~k~  402 (403)
T d1wsta1         375 LNFT-YVPEETIREGVRRLAETIKEEMKR  402 (403)
T ss_dssp             EECS-SSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEec-CCCHHHHHHHHHHHHHHHHHHHhc
Confidence            9942 368999999999999999866554

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.86  E-value=3.1e-20  Score=186.58  Aligned_cols=325  Identities=17%  Similarity=0.151  Sum_probs=204.6

Q ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHH
Q 010250          102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKL  181 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~  181 (514)
                      .||+..|..  .++ .+|.+++|+.+.+++...|.     +.....+|.+.|++++. .+.++|++++++++|+..+++.
T Consensus        27 ~I~ls~g~p--~~~-~p~~i~~al~~~l~~~~~Y~-----~~~G~~elr~aiA~~~~-~~~~~Iiit~G~~~al~~~~~~   97 (368)
T d1v2da_          27 AVNLGQGFP--SNP-PPPFLLEAVRRALGRQDQYA-----PPAGLPALREALAEEFA-VEPESVVVTSGATEALYVLLQS   97 (368)
T ss_dssp             CEECCCCSC--SSC-CCHHHHHHHHHHTTTSCSCC-----CTTCCHHHHHHHHHHHT-SCGGGEEEESSHHHHHHHHHHH
T ss_pred             CEEecCCCC--CCC-CCHHHHHHHHHHhhcccCCC-----CCcCCHHHHHHHHhhcc-cCCcceeeccchHHHHHHHhhc
Confidence            488766632  122 57899999999887643331     12224678888888874 4678999999999999999987


Q ss_pred             HHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC-CCcccCCCCCCChhHHHHHHHHHH
Q 010250          182 VWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC-PHYWRYAHPGETEEEYSTRLANNL  260 (514)
Q Consensus       182 a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l  260 (514)
                      ..        ...+.|++.+++|+................ .          ++. .+.|.             .+.+++
T Consensus        98 l~--------~~~d~v~~~~p~~~~~~~~~~~~g~~~~~~-~----------~~~~~~~~~-------------~d~~~l  145 (368)
T d1v2da_          98 LV--------GPGDEVVVLEPFFDVYLPDAFLAGAKARLV-R----------LDLTPEGFR-------------LDLSAL  145 (368)
T ss_dssp             HC--------CTTCEEEEEESCCTTHHHHHHHTTCEEEEE-E----------CEEETTEEE-------------CCHHHH
T ss_pred             cc--------cccccccccCCcchhhhhHHHhcCCcccee-c----------ccccccccc-------------CCHHHH
Confidence            63        345788899999987643333222111100 0          000 00011             013555


Q ss_pred             HHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCC--chhch
Q 010250          261 EDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP--DLVSF  338 (514)
Q Consensus       261 e~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~p--Div~~  338 (514)
                      ++.+.   ++....+++.| ++.+|.+ .+.+.+++|.++|++||+++|.||++..+................  .+.++
T Consensus       146 ~~~~~---~~~~~i~~~~p-~NPtG~~-~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (368)
T d1v2da_         146 EKALT---PRTRALLLNTP-MNPTGLV-FGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSA  220 (368)
T ss_dssp             HTTCC---TTEEEEEEESS-CTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEH
T ss_pred             HHhhc---cCceEEEEcCC-CCccccc-CCHHHHHHHHHHHHHcCCeeeechhhhhhcccccccccccccccccceeecc
Confidence            55443   34445566666 5566654 467889999999999999999999997543332221111111111  23468


Q ss_pred             hhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc----HHHHHHHHHHHHHhh
Q 010250          339 AKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN----IVEQVNKIAPKFQDG  414 (514)
Q Consensus       339 sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~----~~~~~~~~~~~l~~~  414 (514)
                      ||.++.+++++|++++++++++.+...       ....+.+.+++.+.++.++++.....+    ..+.++++.+++.+.
T Consensus       221 sk~~~~~G~R~g~~~~~~~~~~~~~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~  293 (368)
T d1v2da_         221 GKRLEATGYRVGWIVGPKEFMPRLAGM-------RQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGG  293 (368)
T ss_dssp             HHHTTCGGGCCEEEECCTTTHHHHHHH-------HHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccchhhhh-------hhccccccccccccccccccccccchhhHHHHHHHHHHhhhhhhhh
Confidence            886665559999999999988877631       233455666666666666666544333    345567777778888


Q ss_pred             hhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee---------CCEEEEeCCCCC
Q 010250          415 VKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS---------GDNIMMSPPFIM  484 (514)
Q Consensus       415 L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------g~~iRi~p~~~~  484 (514)
                      |+++   ++ ....+. |.+++++++...               ..+.+.++||++.|+         .+.|||+  +..
T Consensus       294 l~~~---g~-~~~~p~g~~~~~~~l~~~~---------------~~~ll~~~gI~v~pg~~F~~~~~~~~~iRis--~~~  352 (368)
T d1v2da_         294 LRAM---GL-RVYVPEGTYFLMAELPGWD---------------AFRLVEEARVALIPASAFYLEDPPKDLFRFA--FCK  352 (368)
T ss_dssp             HHHT---TC-CEECCSBSSEEEEECTTCC---------------HHHHHHHTCEECEEGGGGCSSSCCTTEEEEE--CCS
T ss_pred             HHhc---Cc-EEecCCceeEEEEeCCccH---------------HHHHHHhCCEEEEechhhCCCCCCCCEEEEE--ecC
Confidence            8765   22 122334 456666664321               224577899999864         2569999  677


Q ss_pred             CHHHHHHHHHHHHHHH
Q 010250          485 SPEEVDELISKYGKAL  500 (514)
Q Consensus       485 t~e~id~~~~~l~~~l  500 (514)
                      ++|+|++++++|++++
T Consensus       353 ~~e~i~~ai~rL~~~l  368 (368)
T d1v2da_         353 TEEELHLALERLGRVV  368 (368)
T ss_dssp             CHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHHHHHhC
Confidence            8999999999998864

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=99.85  E-value=1.1e-19  Score=182.03  Aligned_cols=330  Identities=9%  Similarity=0.003  Sum_probs=192.0

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCcc
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKK  195 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~  195 (514)
                      .+|.|.+|+.+.+....+.++...+ .+....+++++.+.++ ..+.++|++++|+++++..++....        ...+
T Consensus        13 ~p~~i~eal~~~~~~~~~~Y~~~~g-~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~~l~~~~~~l~--------~~gd   83 (361)
T d1d2fa_          13 TAPCIIEALNQRLMHGVFGYSRWKN-DEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWS--------ETGE   83 (361)
T ss_dssp             CCHHHHHHHHHHHTTCCCCCCCSCC-HHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSS--------CTTC
T ss_pred             CCHHHHHHHHHHHhCCCCCCCCCCC-HHHHHHHHHHHHHHhCCCCCcceEEEeCCHHHHHHHHhhhcc--------cccc
Confidence            5799999999988754332222232 2345556666666553 2356899999999999998887652        2346


Q ss_pred             EEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250          196 KFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF  275 (514)
Q Consensus       196 ~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav  275 (514)
                      +|++.+++|.+....... .+.........         ...+.|.             .+.+.+++.+.   ..+++++
T Consensus        84 ~Vlv~~P~y~~~~~~~~~-~g~~~~~v~~~---------~~~~~~~-------------~d~~~~~~~~~---~~~~~~i  137 (361)
T d1d2fa_          84 GVVIHTPAYDAFYKAIEG-NQRTVMPVALE---------KQADGWF-------------CDMGKLEAVLA---KPECKIM  137 (361)
T ss_dssp             EEEEEESCCHHHHHHHHH-TTCEEEEEECE---------ECSSSEE-------------CCHHHHHHHHT---STTEEEE
T ss_pred             ccccccccccchhHHHHh-hcceEEeeccc---------ccccccc-------------cccccchhhcc---cCCceeE
Confidence            899999999776432222 12111000000         0000000             01355665553   2355555


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC-Cchh---chhhhhcCCccccee
Q 010250          276 IAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK-PDLV---SFAKALSSAYMPIGA  351 (514)
Q Consensus       276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~-pDiv---~~sK~l~gG~~pig~  351 (514)
                      ++...+|.+|.+ .+.+.+++|.++|+++|+++|+||+|.+|-..+..... ..... .+.+   ++||.++-+++++|+
T Consensus       138 ~l~~p~NPTG~~-~s~~~~~~i~~~~~~~~~~lI~De~y~~~~~~~~~~~~-~~~~~~~~~v~~~s~SK~~~~~g~R~g~  215 (361)
T d1d2fa_         138 LLCSPQNPTGKV-WTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIP-WSNVARGDWALLTSGSKSFNIPALTGAY  215 (361)
T ss_dssp             EEESSCTTTCCC-CCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCC-GGGTCCSSEEEEECSHHHHTCGGGCCEE
T ss_pred             Eecccccccccc-cchhhhhhhhhhhhhhheeeeecccccccccccccccc-ccccccccccccccccccccccccccee
Confidence            555556666754 45688999999999999999999999987444432211 11122 2333   568977643489998


Q ss_pred             EEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHhhhhhc-cCCCceeEE
Q 010250          352 ILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQDGVKAF-SDSPIIGEI  427 (514)
Q Consensus       352 v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~v  427 (514)
                      ++.. +...+.....     ..........+..++++++.+++...+  +.....++++.+.+.+.+.+. .....   .
T Consensus       216 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~---~  287 (361)
T d1d2fa_         216 GIIENSSSRDAYLSA-----LKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNW---Q  287 (361)
T ss_dssp             EEECSHHHHHHHHHH-----HHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCC---C
T ss_pred             eecchhHHHHHHhhh-----cccccccccchhhhHHHHHHHhhccchhhhcccccchhhHHHHHHHhhhhcccccc---c
Confidence            8664 3333332210     001111223344555555555543221  234455556666666665543 22111   1


Q ss_pred             Eee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-------CCEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250          428 RGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------GDNIMMSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       428 ~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~~  498 (514)
                      .+. |.++++++.....          -...++.+|++ .||++.|+       .+++|++  +..++|++++++++|.+
T Consensus       288 ~p~gg~~~~~~l~~~~~----------~~~~~~~~Ll~~~gv~v~pG~~F~~~~~~~vRis--~~~~~e~l~~al~rl~~  355 (361)
T d1d2fa_         288 IPQSTYLAWLDLRPLNI----------DDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLN--AGCPRSKLEKGVAGLIN  355 (361)
T ss_dssp             CCSBCSEEEEECGGGCC----------CHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEE--CCSCHHHHHHHHHHHHH
T ss_pred             ccCceeEEEEEccCCCC----------CHHHHHHHHHHhCCEEEEeccccCCCCCCEEEEE--EcCCHHHHHHHHHHHHH
Confidence            223 5566777653221          14567777765 59999864       2469999  56789999999999999


Q ss_pred             HHHHH
Q 010250          499 ALKAT  503 (514)
Q Consensus       499 ~l~~~  503 (514)
                      +++++
T Consensus       356 ~l~~l  360 (361)
T d1d2fa_         356 AIRAV  360 (361)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            99876

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=99.85  E-value=7.9e-20  Score=185.37  Aligned_cols=345  Identities=12%  Similarity=0.046  Sum_probs=198.5

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEAND  176 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~  176 (514)
                      .|+.+|||..|..  .|. .+|.|++|+.+.++...+.++  .+..++...+++.+.+.++ ....++|++++++++|+.
T Consensus        29 ~g~~vi~l~~g~p--df~-~p~~v~~al~~~~~~~~~~Y~--~g~~~Lr~aia~~~~~~~g~~~~~~~I~vt~G~~~al~  103 (394)
T d1c7na_          29 VGNEVVPLSVADM--EFK-NPPELIEGLKKYLDETVLGYT--GPTEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVF  103 (394)
T ss_dssp             CCTTCCCCCSSSC--SSC-CCHHHHHHHHHHHHHCCCSSB--CCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred             cCCCeEEccCCCC--CCC-CCHHHHHHHHHHHhCCCcCCC--CCCHHHHHHHHHHHHHhcCCCCCCcceEeeccchhhhh
Confidence            4677888866532  232 589999999999986433221  1222333444444444332 235689999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL  256 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (514)
                      .+++...        ..++.|++.++.|.+.........+.....       +.   ......|.             .+
T Consensus       104 ~~~~~~~--------~pgd~vi~~~p~~~~~~~~~~~~g~~~v~~-------~~---~~~~~~~~-------------~d  152 (394)
T d1c7na_         104 NAVREFT--------KPGDGVIIITPVYYPFFMAIKNQERKIIEC-------EL---LEKDGYYT-------------ID  152 (394)
T ss_dssp             HHHHHHC--------CTTCEEEECSSCCTHHHHHHHTTTCEEEEC-------CC---EEETTEEE-------------CC
T ss_pred             hhhcccc--------ccccccccccCcccchhhHHhhhhhccccc-------cc---cccccccc-------------ch
Confidence            9998763        345789999999987644333322221100       00   00000000             00


Q ss_pred             HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceeccc---CCCC
Q 010250          257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKY---SIKP  333 (514)
Q Consensus       257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~---gv~p  333 (514)
                      .+.++.++.   .+++.++++...+|.+|.+ .+++.+++|.++|++||+++|+||+|..+-..+........   +...
T Consensus       153 ~~~~~~~~~---~~~~~~i~l~~P~NPTG~v-~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~  228 (394)
T d1c7na_         153 FQKLEKLSK---DKNNKALLFCSPHNPVGRV-WKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLAD  228 (394)
T ss_dssp             HHHHHHHHT---CTTEEEEEEESSBTTTTBC-CCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHT
T ss_pred             hhhhhhhhc---cccceEEEeccccccccee-ccHHHhhhhhccccccceeEeccccccccccCCccccchhhhhccccc
Confidence            244554443   2344444444445555654 46789999999999999999999999987444432211111   1111


Q ss_pred             c---hhchhhhhcCCcccceeEEeCH-HHHHHhhhccCCCCcccccCC-CCCcHHHHHHHHHHHHHHhh--ccHHHHHHH
Q 010250          334 D---LVSFAKALSSAYMPIGAILVSP-EVSEVIHSQSNTLGSFSHGFT-YSGHPVSCAVAIEALKIYKE--RNIVEQVNK  406 (514)
Q Consensus       334 D---iv~~sK~l~gG~~pig~v~~~~-~i~~~l~~~~~~~~~~~~~~t-~~~~pl~~aaa~aal~~~~~--~~~~~~~~~  406 (514)
                      .   +.++||.++-.++++|++++++ .+.+.+...       ....+ ........+++....+...+  ++..+..++
T Consensus       229 ~~i~~~s~SK~~~~~G~R~g~~~~~~~~i~~~~~~~-------~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~  301 (394)
T d1c7na_         229 KTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKS-------RDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDK  301 (394)
T ss_dssp             TEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHH-------HHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             ceeecccccccccccccccccccccChhhhhhhhhh-------hhhccccccccccchhhhhhhcchhhhhcccccccch
Confidence            1   2258997764449999888764 565655421       11111 12223333333333322111  234455566


Q ss_pred             HHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee-------CCEEE
Q 010250          407 IAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS-------GDNIM  477 (514)
Q Consensus       407 ~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~-------g~~iR  477 (514)
                      +.+.+.+.++..  .+.+...... |.++++++.....          -...+++.|+++ ||++.|+       .+.+|
T Consensus       302 ~~~~~~~~l~~~--~~~~~~~~p~g~~~~~~~~~~~~~----------~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~~~iR  369 (394)
T d1c7na_         302 NQRIVKDFFEVN--HPEIKAPLIEGTYLQWIDFRALKM----------DHKAMEEFMIHKAQIFFDEGYIFGDGGIGFER  369 (394)
T ss_dssp             HHHHHHHHHHHH--CTTSBCCCCSBSSEEEEECGGGCC----------CHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEE
T ss_pred             hhhhhhhhhhcc--ccceeecCCCceeEEEEECCCCCC----------CHHHHHHHHHHhCCEEEEcchhhCCCCCCEEE
Confidence            666666666543  1112222334 4456677754221          145677887765 9999874       24699


Q ss_pred             EeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      |+  +..++|+|++++++|+++++++
T Consensus       370 is--~~~~~e~i~eal~rl~~~l~~L  393 (394)
T d1c7na_         370 IN--LAAPSSVIQESLERLNKALKDL  393 (394)
T ss_dssp             EE--CCSCHHHHHHHHHHHHHHHHHH
T ss_pred             EE--EeCCHHHHHHHHHHHHHHHHhc
Confidence            99  6778999999999999999876

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=99.84  E-value=4.8e-19  Score=180.91  Aligned_cols=355  Identities=13%  Similarity=0.048  Sum_probs=209.4

Q ss_pred             EEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc---ccccccCCchHHHHHHHHHHhcCc-CC-CCeEEEeCChhHHHH
Q 010250          102 YLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY---HSFWNRTTKPSLDLAKELLEMFTA-SK-MAKVFFTNSGSEAND  176 (514)
Q Consensus       102 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~---~~~~~~~~~~~~ela~~L~~~~~~-~~-~~~v~~~~sGseA~~  176 (514)
                      .||+..|.   +--..++.|++|+.++++.....   +....+..+....+++++.+.++. .. .++|++++++++|+.
T Consensus        28 ~I~L~~G~---Pd~~~p~~i~eal~~a~~~~~~~~~~Y~~~~G~~~lReaiA~~~~~~~g~~~~p~~~I~it~G~~~al~  104 (418)
T d2r5ea1          28 PLNLGQGF---PDYHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALY  104 (418)
T ss_dssp             CEECSSSC---CSSCCCHHHHHHHHHHHTCSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred             CEEccCCC---CCCCCCHHHHHHHHHHHhCCCccCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCccceEEEcCCCchhhh
Confidence            47876663   32224688999999998754321   111123445556677777766532 22 478999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL  256 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (514)
                      .+++...        ..++.|++.+++|.+........++..... .......... . ....|                
T Consensus       105 ~~~~~l~--------~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v-~~~~~~~~~~-~-~~~~~----------------  157 (418)
T d2r5ea1         105 ATIQGHV--------DEGDEVIIIEPFFDCYEPMVKAAGGIPRFI-PLKPNKTGGT-I-SSADW----------------  157 (418)
T ss_dssp             HHHHHHC--------CTTCEEEEEESCCTTHHHHHHHTTCEEEEE-ECEESCCSSC-E-EGGGE----------------
T ss_pred             hhhhhcc--------ccccceeccccccchhhHHHHHcCCeEEEE-Eecccccccc-h-hhhhh----------------
Confidence            9998764        346789999999988754433333221100 0000000000 0 00000                


Q ss_pred             HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-e-ecccCCCCc
Q 010250          257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-G-CDKYSIKPD  334 (514)
Q Consensus       257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~-~~~~gv~pD  334 (514)
                      ..+++++.... ...++++++.+.+|.+|.+. +++.+++|.++|++||+++|.||+|..+...+... . ....+..+.
T Consensus       158 ~~~~~~~~~~~-~~~~~~~~i~~p~NPtG~~~-s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~~~~~~~  235 (418)
T d2r5ea1         158 VLDNNELEALF-NEKTKMIIINTPHNPLGKVM-DRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWER  235 (418)
T ss_dssp             ECCHHHHHHHC-CTTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGG
T ss_pred             hhhHHHHhhhh-hccccceecCCcCccccccc-cHHHHHHHhhhhhcCCeeeecccchhhhccCCCccccccccccccce
Confidence            01222222222 24566666655666667554 67899999999999999999999998764433211 1 122222222


Q ss_pred             hh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh---h------ccHHH
Q 010250          335 LV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK---E------RNIVE  402 (514)
Q Consensus       335 iv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~---~------~~~~~  402 (514)
                      ++   ++||.++..++++|++++++++++.+...       ....+++.+...+.++.+.+....   +      +.+.+
T Consensus       236 ~i~~~S~SK~~~~pGlRiG~~~~~~~~i~~~~~~-------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~  308 (418)
T d2r5ea1         236 TITIGSAGKTFSLTGWKIGWAYGPEALLKNLQMV-------HQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISG  308 (418)
T ss_dssp             EEEEEEHHHHTTCGGGCCEEEESCHHHHHHHHHH-------HTTTTCSCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHH
T ss_pred             eeeeecCCccccCCCcccccccccchhhhhhhhc-------ccccccccccchhhhccccccccccccccchhhHHHHHH
Confidence            22   68998874349999999999998887642       222345555555555544443211   0      12355


Q ss_pred             HHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCC-CCccchHHHHHHHHHH-CCcEEEeeC-------
Q 010250          403 QVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPF-PPEWGIGAYFGAQCEK-HGMLVRVSG-------  473 (514)
Q Consensus       403 ~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~l~~-~Gv~~~~~g-------  473 (514)
                      +++.+++.+.+.|+++   ++......-|.++++++.......... .........|++.|++ .||.+.|+.       
T Consensus       309 ~~~~~r~~l~~~L~~~---g~~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~  385 (418)
T d2r5ea1         309 ELMAKRDYMASFLAEV---GMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPN  385 (418)
T ss_dssp             HHHHHHHHHHHHHHHT---TCEEEECSBSSEEEEECGGGSTTCCGGGCCCSSHHHHHHHHHHHHHSEECBCGGGGSCGGG
T ss_pred             HHHHhhhhHHhhHhhc---CCcccCCCceeEEEEEcccccccccchhcccccCHHHHHHHHHHHCCEEEeCchhhCCCCC
Confidence            6667777788888765   322222333556777876532211110 0111124567777765 599998741       


Q ss_pred             -----CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          474 -----DNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       474 -----~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                           +.|||+  +..++|+|++++++|++.+
T Consensus       386 ~~~g~~~iRis--~~~~~e~l~~a~~rl~~~l  415 (418)
T d2r5ea1         386 KHLGEDFVRYC--FFKKDENLQKAAEILRKWK  415 (418)
T ss_dssp             HHHHTTEEEEE--CCSCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEE--ecCCHHHHHHHHHHHHHHH
Confidence                 469999  6779999999999998876

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=99.84  E-value=1.1e-19  Score=183.09  Aligned_cols=337  Identities=16%  Similarity=0.116  Sum_probs=203.4

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcC-cCCCCeEEEeCChhHHHH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFT-ASKMAKVFFTNSGSEAND  176 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~-~~~~~~v~~~~sGseA~~  176 (514)
                      .|+.+||+..|..  .|. .++.|++++.+.+....+.++...+..+....+++.+..... ....+++++++++++|+.
T Consensus        26 ~G~~vI~l~~G~p--~~~-~p~~i~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~~t~G~~~al~  102 (375)
T d1o4sa_          26 KGEDVINLTAGEP--DFP-TPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALF  102 (375)
T ss_dssp             TTCCCEECCCSSC--SSC-CCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHH
T ss_pred             CCCCeEECCCcCC--CCC-CCHHHHHHHHHHHhcCCcCCCCCcCCHHHHHHHHhhhhhccccccccccccccCcHHHHHH
Confidence            4778899887743  243 478899999998876433222222344555555665554432 245689999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL  256 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (514)
                      .+++...        ..++.|++.+++|............... .            .+......+              
T Consensus       103 ~~~~~l~--------~~gd~vlv~~P~y~~~~~~~~~~~~~~~-~------------~~~~~~~~~--------------  147 (375)
T d1o4sa_         103 NAFMALL--------DPGDEVIVFSPVWVSYIPQIILAGGTVN-V------------VETFMSKNF--------------  147 (375)
T ss_dssp             HHHHHHC--------CTTCEEEEEESCCTTHHHHHHHTTCEEE-E------------EECCGGGTT--------------
T ss_pred             HHHHHHh--------CCCCEEEEccCccccchhhhhccccccc-c------------ccccccccc--------------
Confidence            9988763        3346899999999876433222111110 0            000000000              


Q ss_pred             HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce-ecccCCCCc-
Q 010250          257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG-CDKYSIKPD-  334 (514)
Q Consensus       257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~~~~gv~pD-  334 (514)
                      ..+.+.+.....+.....+++.| ++.+|.+. +.+.+++|.++|++|++++|.||++..+...+.... ....+.... 
T Consensus       148 ~~~~~~~~~~~~~~~~~~~l~nP-~NPTG~~~-s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~  225 (375)
T d1o4sa_         148 QPSLEEVEGLLVGKTKAVLINSP-NNPTGVVY-RREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRI  225 (375)
T ss_dssp             CCCHHHHHHTCCTTEEEEEEESS-CTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTE
T ss_pred             cchhHHHHHhhccCccEEEEeCC-CCCccCCC-CHHHHHHHHHhHHHcCCceehHhhhccccccccccccccccCCCCCE
Confidence            01122222222333445666666 66667654 678999999999999999999999986533332221 111221222 


Q ss_pred             --hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 010250          335 --LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQ  412 (514)
Q Consensus       335 --iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~  412 (514)
                        +-++||.++-.++++|++++++++++.+...       ....+..........+...++.. .....+.++++.+.+.
T Consensus       226 i~~~S~SK~~~l~G~R~G~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~  297 (375)
T d1o4sa_         226 VYINGFSKSHSMTGWRVGYLISSEKVATAVSKI-------QSHTTSCINTVAQYAALKALEVD-NSYMVQTFKERKNFVV  297 (375)
T ss_dssp             EEEEESTTTTTCGGGCCEEEECCHHHHHHHHHH-------HHHHTCSCCHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHH
T ss_pred             EEEeechhhccCCccccccccccccchhhhhhh-------hccccccccccchhhhhhhcccc-hhhhHHHHHHHHHHHH
Confidence              2368998874339999999999988877632       11122333333333333222211 1234667777888888


Q ss_pred             hhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHH-HHHCCcEEEee-----CCEEEEeCCCCCC
Q 010250          413 DGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQ-CEKHGMLVRVS-----GDNIMMSPPFIMS  485 (514)
Q Consensus       413 ~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~-----g~~iRi~p~~~~t  485 (514)
                      +.|++. ....   ..+. |.++++++..+             ...++.+ +.++||++.|+     .++|||+  +..+
T Consensus       298 ~~l~~~-g~~~---~~p~gg~f~~~~~~~~-------------~~~~~~~ll~~~gV~v~pG~~F~~~g~iRis--~~~~  358 (375)
T d1o4sa_         298 ERLKKM-GVKF---VEPEGAFYLFFKVRGD-------------DVKFCERLLEEKKVALVPGSAFLKPGFVRLS--FATS  358 (375)
T ss_dssp             HHHHHT-TCCC---CCCSBSSEEEEECSSC-------------HHHHHHHHHHHHCEECEEGGGGTCTTEEEEE--CCSC
T ss_pred             HHHHhc-CceE---ecCCccEEEEEECCCC-------------HHHHHHHHHHhCCEEEEEccccCCCCeEEEE--EcCC
Confidence            888775 2221   2233 55677776431             2234455 55679999975     2579999  6779


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010250          486 PEEVDELISKYGKALK  501 (514)
Q Consensus       486 ~e~id~~~~~l~~~l~  501 (514)
                      +|+|++++++|+++++
T Consensus       359 ~e~l~~al~rl~~~l~  374 (375)
T d1o4sa_         359 IERLTEALDRIEDFLN  374 (375)
T ss_dssp             HHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999999999999874

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=99.83  E-value=1.9e-19  Score=182.17  Aligned_cols=341  Identities=12%  Similarity=0.040  Sum_probs=205.3

Q ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCCeEEEeCChhHHH
Q 010250           97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNSGSEAN  175 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~~v~~~~sGseA~  175 (514)
                      ..|+.+||+..|...  |. .++.+.+++.+.......|... .+..+....+++.+.+..+. ...++|++++++++++
T Consensus        25 ~~g~~vi~l~~G~p~--~~-~p~~~~~al~~~~~~~~~Y~~~-~G~~~LR~aia~~~~~~~g~~~~~~~I~it~G~~~~l  100 (389)
T d2gb3a1          25 KRGVRIHHLNIGQPD--LK-TPEVFFERIYENKPEVVYYSHS-AGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAI  100 (389)
T ss_dssp             HTTCEEEECSSCCCC--SC-CCTHHHHHHHHTCCSSCCCCCT-TCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHH
T ss_pred             HcCCCEEECCCCCCC--CC-CCHHHHHHHHhcCCCCCCCCCC-cCCHHHHHHHHHHHHHhcCCCcccceEEecccccccc
Confidence            358889998776431  32 3677888887765443333221 23344455566666655432 3567999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      ..++++..        ..++.|++.+++|.................             +....  .....         
T Consensus       101 ~~~~~~l~--------~~gd~V~i~~P~y~~~~~~~~~~g~~~~~~-------------~~~~~--~~~~~---------  148 (389)
T d2gb3a1         101 LFSFAVIA--------NPGDEILVLEPFYANYNAFAKIAGVKLIPV-------------TRRME--EGFAI---------  148 (389)
T ss_dssp             HHHHHHHC--------CTTCEEEEEESCCTHHHHHHHHHTCEEEEE-------------ECCGG--GTSCC---------
T ss_pred             cccccccc--------cCCCeEEEeCCCCccccccccccCcccccc-------------ccccc--cccch---------
Confidence            99988763        345689999999987643322222111000             00000  00000         


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL  335 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi  335 (514)
                       .+.+   ..... +++.++++...++.+|.+. +.+.+++|.++|++||+++|.||++..+...+.........-...+
T Consensus       149 -~~~~---~~~~~-~~~~~~~l~nP~NPtG~~~-s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~  222 (389)
T d2gb3a1         149 -PQNL---ESFIN-ERTKGIVLSNPCNPTGVVY-GKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVV  222 (389)
T ss_dssp             -CTTG---GGGCC-TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEE
T ss_pred             -hhhh---hhhcc-cCccEEEeCCCCccccccc-hHHHHHHHHhhcccCCEEEEEecccccccccccccccccccccccc
Confidence             0111   11222 3454444444456666554 6789999999999999999999999988665543222221111222


Q ss_pred             h--chhhhhcCCcccceeEEeCHH-HHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHH
Q 010250          336 V--SFAKALSSAYMPIGAILVSPE-VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPK  410 (514)
Q Consensus       336 v--~~sK~l~gG~~pig~v~~~~~-i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~  410 (514)
                      +  ++||.++.+++++|+++++++ +...+..        ...+.++.+++...++.+.+...++  +...+..+++.+.
T Consensus       223 v~~s~sK~~~~~GlRiG~~~~~~~~i~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  294 (389)
T d2gb3a1         223 VIDSVSKKFSACGARVGCLITRNEELISHAMK--------LAQGRLAPPLLEQIGSVGLLNLDDSFFDFVRETYRERVET  294 (389)
T ss_dssp             EEEESTTTTTCGGGCCEEEECSCHHHHHHHHH--------HHHHSCCCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCcccceeeeeccchhHHHHHhh--------hhhccccccccccccccccccccchhcccccccccccchh
Confidence            2  567977765599999998654 4444432        1223445566666666665542211  2456677778888


Q ss_pred             HHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC------CcEEEee----------C
Q 010250          411 FQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH------GMLVRVS----------G  473 (514)
Q Consensus       411 l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------Gv~~~~~----------g  473 (514)
                      +.+.|+++   +....+ ..-|.+++++++...            ...+++.|+++      |+.+.|+          .
T Consensus       295 ~~~~L~~~---~~~~~~~p~~g~~~~~~lp~~~------------~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~~  359 (389)
T d2gb3a1         295 VLKKLEEH---GLKRFTKPSGAFYITAELPVED------------AEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGK  359 (389)
T ss_dssp             HHHHHHHT---TCCCBCCCSBSSEEEEECSSSC------------HHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTS
T ss_pred             hhhhhhhh---ccccccCCCceEEEEEeCCCCC------------HHHHHHHHHHhhhhhhCCEEEEeCcccccCCCCCC
Confidence            88888776   222222 234667777775321            44577777654      5666553          1


Q ss_pred             CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          474 DNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       474 ~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      +.+||+  +..+++++++++++|.+++++..
T Consensus       360 ~~iRis--~~~~~~~l~~a~~~L~~~lk~f~  388 (389)
T d2gb3a1         360 KEIRIA--CVLEKDLLSRAIDVLMEGLKMFC  388 (389)
T ss_dssp             SEEEEE--CCSCHHHHHHHHHHHHHHHHHHH
T ss_pred             CEEEEE--EcCCHHHHHHHHHHHHHHHHHhh
Confidence            469999  67899999999999999998753

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=5.2e-19  Score=180.66  Aligned_cols=359  Identities=13%  Similarity=0.061  Sum_probs=207.7

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc--ccccccCCchHHHHHHHHHHhcCcC-C-CCeEEEeCChhHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY--HSFWNRTTKPSLDLAKELLEMFTAS-K-MAKVFFTNSGSEA  174 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~--~~~~~~~~~~~~ela~~L~~~~~~~-~-~~~v~~~~sGseA  174 (514)
                      +..+||+..|..  .+. .++.|++|+.+++.+....  +....+..+....+++++.+.++.. . .++|++++++++|
T Consensus        24 ~~dvI~l~~G~p--~~~-~p~~v~~a~~~al~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~it~G~~~a  100 (418)
T d1w7la_          24 EHDVVNLGQGFP--DFP-PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGA  100 (418)
T ss_dssp             TSCCEECCCCSC--SSC-CCHHHHHHHHHHTSSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHH
T ss_pred             CCCCEECCCCCC--CCC-CCHHHHHHHHHHHhCCCcccCCCCCcCCHHHHHHHHHHHHHHhCCCCCcccceeeccCcHHH
Confidence            445789877742  122 4677999999988753211  1111223344555666665554321 2 2479999999999


Q ss_pred             HHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHH
Q 010250          175 NDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYST  254 (514)
Q Consensus       175 ~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (514)
                      +..+++...        ..++.|++.++.|+.........+.......... .....  ...+          ..+.+. 
T Consensus       101 l~~~~~~l~--------~~g~~vlv~~p~~~~y~~~~~~~g~~~v~~~~~~-~~~~~--~~~~----------~~~~~~-  158 (418)
T d1w7la_         101 LFTAFQALV--------DEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKP-GPIQN--GELG----------SSSNWQ-  158 (418)
T ss_dssp             HHHHHHHHC--------CTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEE-CC-----CCSE----------EGGGEE-
T ss_pred             HHHHHHhhc--------cCCceeeccccccchhHHHHHHcCCEeecccccc-ccccc--cccc----------cccCcc-
Confidence            999988764        3457899999999887543333332211110000 00000  0000          000000 


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-ee-cccCCC
Q 010250          255 RLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-GC-DKYSIK  332 (514)
Q Consensus       255 ~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~~-~~~gv~  332 (514)
                         -+.++......+.....++..| ++.+|.+ .+++.+++|.++|++|++++|.||+|..+...+... .. ...+..
T Consensus       159 ---~d~~~~~~~~~~~~~~i~~~~p-~NPtG~~-~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~  233 (418)
T d1w7la_         159 ---LDPMELAGKFTSRTKALVLNTP-NNPLGKV-FSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMW  233 (418)
T ss_dssp             ---CCHHHHHHHCCTTEEEEEEESS-CTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTG
T ss_pred             ---cchhhhhccccccccceeccCc-CCccccc-ccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHHccccc
Confidence               0122222333333444444455 4555544 467889999999999999999999999886655422 11 111222


Q ss_pred             Cch---hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh---h------ccH
Q 010250          333 PDL---VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK---E------RNI  400 (514)
Q Consensus       333 pDi---v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~---~------~~~  400 (514)
                      +.+   .++||.++..++++|++++++++++.+...       ....+++.+.+++.++.+++....   +      ..+
T Consensus       234 ~~~i~~~S~SK~~~~pG~RvG~~v~~~~~~~~l~~~-------~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~  306 (418)
T d1w7la_         234 ERTLTIGSAGKTFSATGWKVGWVLGPDHIMKHLRTV-------HQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQF  306 (418)
T ss_dssp             GGEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHH-------HHTTTSCCCHHHHHHHHHHHHHHHHTTTSTTSHHHHH
T ss_pred             cccceecccCccccCCCCcccccccchhhhhhhccc-------cccccccccchhhHHHHHHhhhccccccccccccccc
Confidence            222   368998775449999999999998887642       222455666777777766665322   1      123


Q ss_pred             HHHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCC--CCccchHHHHHHHH-HHCCcEEEeeC---
Q 010250          401 VEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPF--PPEWGIGAYFGAQC-EKHGMLVRVSG---  473 (514)
Q Consensus       401 ~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~l-~~~Gv~~~~~g---  473 (514)
                      .+.++++++.+.+.|+++   ++. ..+.. |.++++++.+.......+  .........++..| .++||.+.|+.   
T Consensus       307 ~~~~~~~r~~l~~~L~~~---g~~-~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~  382 (418)
T d1w7la_         307 PQAMQRCRDHMIRSLQSV---GLK-PLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFY  382 (418)
T ss_dssp             HHHHHHHHHHHHHHHHTT---TCE-EEECSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGS
T ss_pred             hhhhhhhhhhhhhhhhhc---CCc-ccCCCceeEEEEECcccccccchhccccccccHHHHHHHHHHHCCEEEEcchhhc
Confidence            555666777777777664   322 23333 556777775421100000  01112244566665 56799998641   


Q ss_pred             ---------CEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          474 ---------DNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       474 ---------~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                               ++|||+  +..+++++++++++|++..
T Consensus       383 ~~~~~~~~~~~iRis--~~~~~~~l~~a~~rl~~~~  416 (418)
T d1w7la_         383 SVPHQKHFDHYIRFC--FVKDEATLQAMDEKLRKWK  416 (418)
T ss_dssp             CHHHHTTSCSEEEEE--CCCCHHHHHHHHHHHHHHH
T ss_pred             CCCccCCCCCEEEEE--EcCCHHHHHHHHHHHHHHh
Confidence                     469999  7789999999999997754

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=99.82  E-value=2.7e-19  Score=182.92  Aligned_cols=351  Identities=15%  Similarity=0.132  Sum_probs=207.0

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc---cccccccCCchHHHHHHHHHHhcC--cCCCCeEEEeCChh
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF---YHSFWNRTTKPSLDLAKELLEMFT--ASKMAKVFFTNSGS  172 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~---~~~~~~~~~~~~~ela~~L~~~~~--~~~~~~v~~~~sGs  172 (514)
                      .++.+|||..|.....+ ...+.+.+++.+.++....   .++...+..+....+++.+.+..+  ..+.++|+++++++
T Consensus        36 ~~~~~I~l~~G~Pd~~~-~P~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~~I~it~G~~  114 (420)
T d1vp4a_          36 ADKDAISFGGGVPDPET-FPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQ  114 (420)
T ss_dssp             TSTTCEECCCCSCCGGG-SCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHH
T ss_pred             CCCCcEecCCcCCCCcc-CCHHHHHHHHHHHHhhCCccccCCCCCcCCHHHHHHHHHHHHHHhCCCCCCHHHeEeccchh
Confidence            45568888776431111 1234566666666654211   111112233445556666655543  23568999999999


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY  252 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (514)
                      +|+..++....        .+++.|++.+++|..........+....             .++..+      .+.+    
T Consensus       115 ~al~~~~~~~~--------~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~-------------~~~~~~------~~~~----  163 (420)
T d1vp4a_         115 QALDLIGKLFL--------DDESYCVLDDPAYLGAINAFRQYLANFV-------------VVPLED------DGMD----  163 (420)
T ss_dssp             HHHHHHHHHHC--------CTTCEEEEEESCCHHHHHHHHTTTCEEE-------------EEEEET------TEEC----
T ss_pred             hhHHHHHHhhh--------ccccccccccccccchhHHHHHHhhhcc-------------cccccc------cccc----
Confidence            99999987653        3457899999999876433322221110             011000      0001    


Q ss_pred             HHHHHHHHHHHHH----Hh-CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceec
Q 010250          253 STRLANNLEDLIL----KE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCD  327 (514)
Q Consensus       253 ~~~~~~~le~li~----~~-~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~  327 (514)
                          .+.++..+.    .. ..+...++++.+.++.+|.+ .+.+.+++|.++|++|++++|.||+|..+...+......
T Consensus       164 ----~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~NPtG~~-~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~  238 (420)
T d1vp4a_         164 ----LNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVT-TSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPI  238 (420)
T ss_dssp             ----HHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCH
T ss_pred             ----cchhhhhhhhhHHHhhccccceeeEecCCCCccchh-hhhhhhhhhhhhhhcccccccccchhhhccccCcccccc
Confidence                122222211    11 11234555565556666755 467899999999999999999999999875555432111


Q ss_pred             ccCCCCchh----chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHh--h--cc
Q 010250          328 KYSIKPDLV----SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYK--E--RN  399 (514)
Q Consensus       328 ~~gv~pDiv----~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~--~--~~  399 (514)
                      .....++.+    +++|.+..| +++|++++++++++.+...       ....+.+.+.+..+++...++...  +  ++
T Consensus       239 ~~~~~~~~~i~~~s~sk~~~~G-~RiG~~~~~~~~i~~l~~~-------~~~~~~~~~~~~q~~~a~~l~~~~~~~~~~~  310 (420)
T d1vp4a_         239 FKIGGPERVVLLNTFSKVLAPG-LRIGMVAGSKEFIRKIVQA-------KQSADLCSPAITHRLAARYLERYDLLEQLKP  310 (420)
T ss_dssp             HHHHCTTTEEEEEESTTTTCGG-GCEEEEECCHHHHHHHHHH-------HHHHHSSCCHHHHHHHHHHHHHSCHHHHTHH
T ss_pred             cccccccceeEEeccccccccc-cccccccccchhhhhhhhh-------hhhccccCchhhhhhhhhhcccccccccchh
Confidence            111123322    356755545 9999999999999888642       111233444555555544443211  1  23


Q ss_pred             HHHHHHHHHHHHHhhhhhc-cCCCceeEEEeee-eeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----
Q 010250          400 IVEQVNKIAPKFQDGVKAF-SDSPIIGEIRGTG-LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----  472 (514)
Q Consensus       400 ~~~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----  472 (514)
                      ..+.++++.+.+.+.|++. ...+.+....+.| .++++++.+....           ..+.+.|.++||++.|+     
T Consensus       311 ~~~~~~~~~~~~~~~L~~~~~~~~g~~~~~p~gg~f~~~~~~~~~d~-----------~~~~~~l~~~gV~v~PG~~F~~  379 (420)
T d1vp4a_         311 TIELYRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGFDT-----------WEMFEYAKRKKVFYVPGRVFKV  379 (420)
T ss_dssp             HHHHHHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTCCT-----------TTTHHHHHHHTEECEEGGGGCT
T ss_pred             HHHHhhhhcccchhhhhhhhccCCCcEEecCCceEEEEEECCCCCCH-----------HHHHHHHHHCCeEEEechhhCC
Confidence            4566777777777888765 4444444444454 5677777543211           12557889999999875     


Q ss_pred             ----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          473 ----GDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       473 ----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                          .++|||+.. ..++|++++++++|.+++++..+
T Consensus       380 ~~~~~~~iRls~~-~~~~e~l~~a~~rL~~~l~~~~~  415 (420)
T d1vp4a_         380 YDEPSPSMRLSFC-LPPDEKIVEGIKRLREVVLEYGK  415 (420)
T ss_dssp             TCCCCSEEEEECS-SSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEEeC-cCCHHHHHHHHHHHHHHHHHhhH
Confidence                147999932 36889999999999999987754

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.81  E-value=1.6e-18  Score=176.61  Aligned_cols=349  Identities=11%  Similarity=0.028  Sum_probs=200.1

Q ss_pred             CCCCEEEEccCCcccccCCC---CCHHHHHHHHHHHhcCCc-cccccccCCchHHHHHHHHHHhcC-------cCCCCeE
Q 010250           97 VNGKKYLDSLAGLWCTALGG---SEPRLVAAATAQLNTLPF-YHSFWNRTTKPSLDLAKELLEMFT-------ASKMAKV  165 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh---~~p~v~~A~~~~l~~~~~-~~~~~~~~~~~~~ela~~L~~~~~-------~~~~~~v  165 (514)
                      .+++.+||+..|..  .+..   -.+.+++++.+.++.... .++...+..+....+++.+.+.+.       ....++|
T Consensus        27 ~~~~~vI~L~~G~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~~~~~~~I  104 (412)
T d1bw0a_          27 PSPKPIIKLSVGDP--TLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNV  104 (412)
T ss_dssp             CSCSCCEECCCCCT--TTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGE
T ss_pred             CCCCCcEECcCCCC--CCCCCccccHHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHHhcCcccccCCCCCCCeE
Confidence            45667889876632  2332   356788888887764321 111122334445556666655431       1346799


Q ss_pred             EEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCC
Q 010250          166 FFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHP  245 (514)
Q Consensus       166 ~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (514)
                      ++++++++|+..+++...        ..++.|++.+++|++........+......       +    .+..+.|.    
T Consensus       105 ~it~G~~~al~~~~~~l~--------~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v-------~----~~~~~~~~----  161 (412)
T d1bw0a_         105 VLCSGGSHGILMAITAIC--------DAGDYALVPQPGFPHYETVCKAYGIGMHFY-------N----CRPENDWE----  161 (412)
T ss_dssp             EEESHHHHHHHHHHHHHC--------CTTCEEEEEESCCTHHHHHHHHTTCEEEEE-------E----EEGGGTTE----
T ss_pred             EEecccccchhhhhhhhh--------ccccceeeeeccchhhhhhhhccCcccccc-------c----cccccccc----
Confidence            999999999999998763        345789999999988754433322211100       0    00000000    


Q ss_pred             CCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc-c
Q 010250          246 GETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM-F  324 (514)
Q Consensus       246 ~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~-~  324 (514)
                               .+.+++++..   .+.....++..|.+++ |.+ .+++.+++|.++|++|++++|+||+|.+|...|.. .
T Consensus       162 ---------~~~~~l~~~~---~~~~~~~~l~np~NPt-G~~-~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~  227 (412)
T d1bw0a_         162 ---------ADLDEIRRLK---DDKTKLLIVTNPSNPC-GSN-FSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPN  227 (412)
T ss_dssp             ---------ECHHHHHHHC---CTTEEEEEEESSCTTT-CCC-CCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTT
T ss_pred             ---------hhhHHHHhhh---hccccccccccccccc-ccc-chhhhccccccccccCCeeeechhhHHHhccCCCCCc
Confidence                     0134444433   3344455555555554 544 36799999999999999999999999988666542 1


Q ss_pred             ee-ccc-CC--CCchh---chhhhhcCCcccceeEEeCHH------HHHHhhhccCCCCcccccCCCCCcHHHHHHHHHH
Q 010250          325 GC-DKY-SI--KPDLV---SFAKALSSAYMPIGAILVSPE------VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEA  391 (514)
Q Consensus       325 ~~-~~~-gv--~pDiv---~~sK~l~gG~~pig~v~~~~~------i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aa  391 (514)
                      .. ... ..  ....+   ++||.++.+++++|++++.+.      ++.....        ....+.+.++..++++.+.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~  299 (412)
T d1bw0a_         228 ATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLEGLKR--------VGMLVCGPCTVVQAALGEA  299 (412)
T ss_dssp             CCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHHHHHH--------HHHHHTCSCHHHHHHHHHH
T ss_pred             cccccccccccccccccccccCccCccCCCCcccccccchhhcchhhhhhhcc--------ccccccCCchhhhhhcccc
Confidence            11 111 11  11122   478988765599999988542      2222221        1112333334444433333


Q ss_pred             HH-HHhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CC
Q 010250          392 LK-IYKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HG  466 (514)
Q Consensus       392 l~-~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~G  466 (514)
                      +. ..++  .+..++++++++.+.+.|.+.   +.+....+. |.++++.+.......     . .....++++|++ .|
T Consensus       300 ~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~---~g~~~~~p~gg~~l~~~~~~~~~~~-----~-~~~~~~~~~ll~~~g  370 (412)
T d1bw0a_         300 LLNTPQEHLDQIVAKIEESAMYLYNHIGEC---IGLAPTMPRGAMYLMSRIDLEKYRD-----I-KTDVEFFEKLLEEEN  370 (412)
T ss_dssp             HHSSCHHHHHHHHHHHHHHHHHHHHHHTTS---TTEEECCCCBTTEEEEEECGGGBSS-----C-CSHHHHHHHHHHHHC
T ss_pred             cccccccccccccchhHHHHHHHHHHHHHh---cCceecCCCCceEEEEeCChhhcCC-----C-CCHHHHHHHHHHhCC
Confidence            22 1111  234556666677777766553   223333344 445566664321110     0 013456666655 69


Q ss_pred             cEEEee-----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          467 MLVRVS-----GDNIMMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       467 v~~~~~-----g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      |++.|+     .++|||+  +..+++++++++++|++++++.
T Consensus       371 V~v~PG~~Fg~~g~iRis--~~~~~e~l~eal~Rl~~~l~~~  410 (412)
T d1bw0a_         371 VQVLPGTIFHAPGFTRLT--TTRPVEVYREAVERIKAFCQRH  410 (412)
T ss_dssp             EECEEGGGGTCTTEEEEE--CCSCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeccccCCCCeEEEE--EcCCHHHHHHHHHHHHHHHHhc
Confidence            999885     2579999  7789999999999999988753

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=2.3e-18  Score=175.12  Aligned_cols=340  Identities=15%  Similarity=0.107  Sum_probs=212.3

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-cc---cc-ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HS---FW-NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAN  175 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~---~~-~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~  175 (514)
                      .|||..++      |.-++.|++++.+.+++.... ++   .+ ....+...+..+.++++++....+.++|++++|+++
T Consensus        24 iYld~a~~------~~~p~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~~~~~~~i~~~~~~T~~~   97 (405)
T d1jf9a_          24 AYLDSAAS------AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGI   97 (405)
T ss_dssp             EECCTTTC------CCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHH
T ss_pred             EEEeCccc------cCCCHHHHHHHHHHHHhccCCCccchhHHHHHHHHHHHHHHHHHHHHcCCCCcccccccCcHHHHH
Confidence            48886443      456899999999887653211 10   00 011234455667888888644557899999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      ..+++......   . .+++.||+.+..||........+....    +..     +..++....      +       ..
T Consensus        98 ~~~~~~~~~~~---~-~~g~~il~~~~e~~s~~~~~~~~a~~~----g~~-----v~~~~~~~~------g-------~~  151 (405)
T d1jf9a_          98 NLVANSWGNSN---V-RAGDNIIISQMEHHANIVPWQMLCARV----GAE-----LRVIPLNPD------G-------TL  151 (405)
T ss_dssp             HHHHHHHHHHH---C-CTTCEEEEETTCCGGGTHHHHHHHHHH----TCE-----EEEECBCTT------S-------CB
T ss_pred             HHHHhcccccc---c-CCCCEEEEEeCcccchHHHHHHHHHHc----CcE-----EEEECCCCC------C-------cC
Confidence            98887643221   1 345678888888887543332221100    000     011111000      0       00


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL  335 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi  335 (514)
                      +++++++++.    +++++|.+..+++..|.+.|    +++|.++|+++|+++++|-+|+ +|..    .++.....+|+
T Consensus       152 ~~~~~~~~i~----~~t~lv~~~~v~~~tG~~~p----i~~i~~~~~~~g~~~~vD~~q~-~g~~----~id~~~~~~D~  218 (405)
T d1jf9a_         152 QLETLPTLFD----EKTRLLAITHVSNVLGTENP----LAEMITLAHQHGAKVLVDGAQA-VMHH----PVDVQALDCDF  218 (405)
T ss_dssp             CGGGHHHHCC----TTEEEEEEESBCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTT-TTTS----CCCHHHHTCSE
T ss_pred             CHHHHHHhcc----CCcEEEEEecCCCcccccCc----hHHhhhHHHHcCCeeeccccee-cccc----ccchhhcCCce
Confidence            1244554443    67899999999999999999    9999999999999999999997 5432    22322345788


Q ss_pred             hchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCc-----ccccC----------CCCCcHHHHHHHHHHHHHHhh-
Q 010250          336 VSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGS-----FSHGF----------TYSGHPVSCAVAIEALKIYKE-  397 (514)
Q Consensus       336 v~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~-----~~~~~----------t~~~~pl~~aaa~aal~~~~~-  397 (514)
                      +++|  |.+ |+ ..+|+++.++++++.+.+.......     +..+.          .-..+..++++..++++.+.+ 
T Consensus       219 ~~~s~hK~~-Gp-~G~g~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~  296 (405)
T d1jf9a_         219 YVFSGHKLY-GP-TGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSAL  296 (405)
T ss_dssp             EEEEGGGTT-SC-SSCEEEEECHHHHTTCCCSSCSSSSEEECCTTTCCEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred             eeccccccc-cC-CCceeeeechhhhcccCcccccccccCccccccccccccchhhhcCCCCcHHHHHHHHHHHHHHHHh
Confidence            8766  886 33 4589999999987765431100000     00000          012356667777778887664 


Q ss_pred             --ccHHHHHHHHHHHHHhhhhhccCCCcee--EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-
Q 010250          398 --RNIVEQVNKIAPKFQDGVKAFSDSPIIG--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-  472 (514)
Q Consensus       398 --~~~~~~~~~~~~~l~~~L~~l~~~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-  472 (514)
                        +.+.++...+.+++.+.++.+   +.+.  ....++.++.+.+....            ...+...|.++||.++.+ 
T Consensus       297 g~~~i~~~~~~L~~~~~~~l~~~---~~~~~~~~~~r~~ivsf~~~~~~------------~~~~~~~L~~~gI~v~~G~  361 (405)
T d1jf9a_         297 GLNNIAEYEQNLMHYALSQLESV---PDLTLYGPQNRLGVIAFNLGKHH------------AYDVGSFLDNYGIAVRTGH  361 (405)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHTTS---TTEEEESCTTCCSEEEEEETTCC------------HHHHHHHHHHTTEECEEEC
T ss_pred             ChHHHHHHHHHHHHHHHhhhhcC---CcccccCCcCcCcEEEEEcCCCC------------HHHHHHHHHHCCcEEEccc
Confidence              345566666666666666654   2221  11223456667664322            445777888999988743 


Q ss_pred             ------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          473 ------------GDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       473 ------------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                                  .+.||+++...+|++|||.++++|+++++-
T Consensus       362 ~c~~~~~~~~~~~g~iRiS~~~ynt~eDid~l~~~l~~i~r~  403 (405)
T d1jf9a_         362 HCAMPLMAYYNVPAMCRASLAMYNTHEEVDRLVTGLQRIHRL  403 (405)
T ss_dssp             TTCHHHHHHTTCSCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             hhhhhHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence                        246999999999999999999999887753

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.79  E-value=5.8e-18  Score=172.23  Aligned_cols=340  Identities=13%  Similarity=0.115  Sum_probs=209.7

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-ccc---cc-cCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSF---WN-RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAN  175 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~~---~~-~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~  175 (514)
                      .|||..+.      |.-++.|++++.+.+++.... ++.   .+ ...+...+..+.++++++....+.++|++++++++
T Consensus        24 iYld~a~~------~~~p~~v~~~~~~~~~~~~~n~~s~~~~~~~~~~~~~e~aR~~ia~llga~~~~~i~~~~~tt~~~   97 (408)
T d1t3ia_          24 VYLDNAAT------SQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAI   97 (408)
T ss_dssp             EECBTTTC------CCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHH
T ss_pred             EEeeCccc------cCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCcccEEeecchHHHH
Confidence            48886544      446889999999987653211 110   00 11234445667788888644457799999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeec---CCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASL---SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY  252 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~---s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (514)
                      ..++.......   - +.++.|++.+..|++........   .|...            ..++.+..      +.     
T Consensus        98 n~~~~~~~~~~---~-~~g~~il~s~~e~~s~~~~~~~~~~~~g~~v------------~~~~~~~~------~~-----  150 (408)
T d1t3ia_          98 NLVAYSWGMNN---L-KAGDEIITTVMEHHSNLVPWQMVAAKTGAVL------------KFVQLDEQ------ES-----  150 (408)
T ss_dssp             HHHHHHTHHHH---C-CTTCEEEEETTCCGGGTHHHHHHHHHHCCEE------------EEECBCTT------SS-----
T ss_pred             HHHHhhccccc---c-CCCCEEEeecccchhhhhhhhhhhhccCceE------------eeeecccc------cc-----
Confidence            88876542221   1 33457777766666543221111   11111            01111100      00     


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC
Q 010250          253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK  332 (514)
Q Consensus       253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~  332 (514)
                        .+.+++++++    .+++++|.+..+++..|.+.|    +++|.++|+++|+++|+|-+|+ +|..    .++.....
T Consensus       151 --~~~~~l~~~~----~~~t~lv~i~~~~~~tG~~~p----~~~i~~~~~~~g~~~ivDa~q~-~g~~----~id~~~~~  215 (408)
T d1t3ia_         151 --FDLEHFKTLL----SEKTKLVTVVHISNTLGCVNP----AEEIAQLAHQAGAKVLVDACQS-APHY----PLDVQLID  215 (408)
T ss_dssp             --BCHHHHHHHC----CTTEEEEEEESBCTTTCBBCC----HHHHHHHHHHTTCEEEEECTTT-TTTS----CCCHHHHT
T ss_pred             --ccHHHhhhcc----CCCceEEEEecccccccccCc----HHHHhhhhhccCceeeecccee-cccc----cccccccC
Confidence              0135555554    257899999999999999998    9999999999999999999997 5433    23333345


Q ss_pred             Cchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCc-------------ccccC-CCCCcHHHHHHHHHHHHHHh
Q 010250          333 PDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGS-------------FSHGF-TYSGHPVSCAVAIEALKIYK  396 (514)
Q Consensus       333 pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~-------------~~~~~-t~~~~pl~~aaa~aal~~~~  396 (514)
                      +|++++|  |.+ |+ ..+|+++.+++......+.......             ..... +-..+..+.++..++++.+.
T Consensus       216 ~D~~~~s~hK~~-gp-~G~g~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l~~al~~~~  293 (408)
T d1t3ia_         216 CDWLVASGHKMC-AP-TGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLT  293 (408)
T ss_dssp             CSEEEEEGGGTT-SC-TTCEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHH
T ss_pred             CceEEecccccc-CC-CCccccccchhhhhcCCceecCCcccccccccccccCCchhhhcCCcHHHHHHHHHHHHHHHHH
Confidence            6888776  764 44 5689999999987665421100000             00000 11234555666667777766


Q ss_pred             h---ccHHHHHHHHHHHHHhhhhhccCCCcee---EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEE
Q 010250          397 E---RNIVEQVNKIAPKFQDGVKAFSDSPIIG---EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVR  470 (514)
Q Consensus       397 ~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~---~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~  470 (514)
                      +   +++.++...+.+++.+.+.++....+..   .....+.++.+.+....            ...+...|.++||.++
T Consensus       294 ~~g~~~i~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~iv~f~~~~~~------------~~~v~~~L~~~gI~v~  361 (408)
T d1t3ia_         294 DLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGLH------------ASDVATMVDQDGIAIR  361 (408)
T ss_dssp             HHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTBC------------HHHHHHHHHTTTEECB
T ss_pred             HcCHHHHHHHHHHHHhHHhhhhccCccccccCCCccccCcceEEEEEeCCCC------------HHHHHHHHhhCCcEEe
Confidence            4   4456777778888887777652211111   00112445566654322            4557788889999876


Q ss_pred             ee-------------CCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          471 VS-------------GDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       471 ~~-------------g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      .+             .+.|||++....|++|||++++.|+++++.
T Consensus       362 ~G~~c~~~~~~~~~~~g~vRiS~~~ynt~~did~li~~L~~~~~~  406 (408)
T d1t3ia_         362 SGHHCTQPLHRLFDASGSARASLYFYNTKEEIDLFLQSLQATIRF  406 (408)
T ss_dssp             CSCTTCHHHHHHTTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             cCcccccHHHHhhcCCccEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence            32             246999999999999999999999998864

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.79  E-value=1.5e-17  Score=167.96  Aligned_cols=339  Identities=19%  Similarity=0.224  Sum_probs=193.1

Q ss_pred             EEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccC-------CchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250          101 KYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRT-------TKPSLDLAKELLEMFTASKMAKVFFTNSGSE  173 (514)
Q Consensus       101 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~-------~~~~~ela~~L~~~~~~~~~~~v~~~~sGse  173 (514)
                      .|||..++      |..+|.|++|+.+.+.+...+.......       .+...+..++++++++ .+.++|+|++|+|+
T Consensus         4 iYlD~aa~------~p~~~~v~ea~~~~~~~~~~~~np~~~~~~~~~~~~~~~~~~R~~iA~~lg-~~~~~I~~~~~~t~   76 (391)
T d1p3wa_           4 IYLDYSAT------TPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVG-ADPREIVFTSGATE   76 (391)
T ss_dssp             EECBTTTC------CCCCHHHHHHHHTTTSTTSCCCCTTCTTSHHHHHHHHHHHHHHHHHHHHHT-CCGGGEEEESSHHH
T ss_pred             EEeeCccc------cCCCHHHHHHHHHHHHhccccCCCchhhhHHHHHHHHHHHHHHHHHHHHcC-CCCCcEEEECCHHH
Confidence            37886543      5579999999998876432210000001       1223355677888875 45689999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee--cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhH
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS--LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEE  251 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~--~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (514)
                      ++..++..+.....    ..++.||+.+..|++.......  ..|...            ..++......          
T Consensus        77 ~l~~~~~~~~~~~~----~~gd~Vv~~~~~~~s~~~~~~~~~~~G~~v------------~~v~~~~~~~----------  130 (391)
T d1p3wa_          77 SDNLAIKGAANFYQ----KKGKHIITSKTEHKAVLDTCRQLEREGFEV------------TYLAPQRNGI----------  130 (391)
T ss_dssp             HHHHHHHHHHHHHG----GGCCEEEEETTSCHHHHHHHHHHHHTTCEE------------EEECCCTTSC----------
T ss_pred             HHHHHHhhhhhhhc----CCCCEEEEeccccchHHHHHHHHHHcCCEE------------EEeCCCCCCe----------
Confidence            99999886643222    2346788777777654221111  112111            1111111000          


Q ss_pred             HHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCC
Q 010250          252 YSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSI  331 (514)
Q Consensus       252 ~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv  331 (514)
                         .+++++++.+.    +++++|++..+++.+|.+.|    +++|.++|++||+++++|++|+ +|..    ..+....
T Consensus       131 ---~d~~~~~~~i~----~~T~lv~is~~~n~tG~~~~----~~~I~~~~~~~~~~~ivD~~~~-~g~~----~~d~~~~  194 (391)
T d1p3wa_         131 ---IDLKELEAAMR----DDTILVSIMHVNNEIGVVQD----IAAIGEMCRARGIIYHVDATQS-VGKL----PIDLSQL  194 (391)
T ss_dssp             ---CCHHHHHHHCC----TTEEEEECCSBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTT-BTTB----CCCTTTS
T ss_pred             ---EcHHHHHHhCC----CCcEEEEEECCCCCCeeECC----HHHHHHHhccCCcEEEEeeccc-cCCc----cccchhc
Confidence               01355665553    57899999999999999988    9999999999999999999997 5432    2233334


Q ss_pred             CCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHH-HHHHHHhh--ccHHHHHHH
Q 010250          332 KPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAI-EALKIYKE--RNIVEQVNK  406 (514)
Q Consensus       332 ~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~-aal~~~~~--~~~~~~~~~  406 (514)
                      .+|+++++  |.+|.  ..+|+++++++......+.... +........+..+....+++ .+++...+  ....+++++
T Consensus       195 ~~D~~~~s~~k~~g~--~g~g~~~~~~~~~~~~~~~~~g-g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  271 (391)
T d1p3wa_         195 KVDLMSFSGHKIYGP--KGIGALYVRRKPRVRIEAQMHG-GGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRG  271 (391)
T ss_dssp             CCSEEEEESTTTTSC--SSCEEEEECBTTBCCCCCSSCS-SCTTTTTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccCC--CceEEEEEecchhcccCCcccC-CccccCcccCcchhhhhhhhhhhhhHHHHHhhHHHHHHHH
Confidence            56776544  66543  4578888888765544321000 00011111111222222222 22232222  234567777


Q ss_pred             HHHHHHhhhhhccCCCceeE-EEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe--------------
Q 010250          407 IAPKFQDGVKAFSDSPIIGE-IRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV--------------  471 (514)
Q Consensus       407 ~~~~l~~~L~~l~~~~~~~~-v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~--------------  471 (514)
                      +..++.++|..+....+... ..+...+..+.+....            ...+...+.  ++.++.              
T Consensus       272 ~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~--~i~v~~G~~c~~~~~~~~~~  337 (391)
T d1p3wa_         272 LRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVE------------GESLIMALK--DLAVSSGSACTSASLEPSYV  337 (391)
T ss_dssp             HHHHHHHTTTTSTTEEECSCTTTSCTTEEEEEETTSC------------HHHHHHHTT--TEECBCCCC------CCCHH
T ss_pred             HHHHHHHHHHhhcCeeecccccccCceEEEEEeCCCC------------hHHHHHHhC--CCEEEccccccCCccchhHH
Confidence            88888888876521110000 0111222333332211            233444442  232221              


Q ss_pred             ----------eCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          472 ----------SGDNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       472 ----------~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                                .++.||+++.+.+|++|||.++++|+++++++++
T Consensus       338 l~~~g~~~~~~~g~iRiS~~~~nt~edid~l~~~l~~~l~~lr~  381 (391)
T d1p3wa_         338 LRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRD  381 (391)
T ss_dssp             HHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHcCCCccccCCEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence                      1246999999999999999999999999998876

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=99.78  E-value=7.8e-18  Score=166.59  Aligned_cols=313  Identities=14%  Similarity=0.105  Sum_probs=197.3

Q ss_pred             eCCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc--CCCCeEEEeCChhH
Q 010250           96 DVNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA--SKMAKVFFTNSGSE  173 (514)
Q Consensus        96 d~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~--~~~~~v~~~~sGse  173 (514)
                      ...++..+++..|  -++++ .++.+.+++.+++......    ..+.....+|.+.+++++..  ...++|++++|+++
T Consensus        15 ~~~~~d~~~l~~~--enp~~-~p~~i~~~~~~~~~~~~~~----~yp~~g~~~Lr~aia~~~~~~~v~~d~I~it~G~~~   87 (334)
T d2f8ja1          15 ETEKRDKTYLALN--ENPFP-FPEDLVDEVFRRLNSDALR----IYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADE   87 (334)
T ss_dssp             CCCCCCSEECSSC--CCSSC-CCHHHHHHHHHHCCTTGGG----SCCCSSCHHHHHHHHHHHTCSSCCGGGEEEEEHHHH
T ss_pred             cccCCCceEEECC--CCCCC-CCHHHHHHHHHHhhcchhc----CCCCCCcHHHHHHHHHHhcccCCCcceEEecCcchh
Confidence            3467778887555  36676 5789999999888653221    11223346677788777632  34678999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS  253 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (514)
                      |+..+++.            .++|++.+++|.+........+.....             ++....+..  +        
T Consensus        88 ~l~~l~~~------------~d~v~i~~P~y~~~~~~~~~~g~~~v~-------------v~~~~~~~~--~--------  132 (334)
T d2f8ja1          88 IIYVMMLM------------FDRSVFFPPTYSCYRIFAKAVGAKFLE-------------VPLTKDLRI--P--------  132 (334)
T ss_dssp             HHHHHHHH------------SSEEEECSSCCHHHHHHHHHHTCCEEE-------------CCCCTTSCC--C--------
T ss_pred             HHHHHhhh------------ccccccccccccccccchhccCCcccc-------------ccccccccc--c--------
Confidence            88876542            257999999998875443333322211             111110000  0        


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCC
Q 010250          254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP  333 (514)
Q Consensus       254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~p  333 (514)
                                 ....++....++..|. +.+|.+.+    .++|.++ .++++++|.||++.++.......   .....+
T Consensus       133 -----------~~~~~~~~~l~l~nP~-NPtG~~~s----~~~l~~~-~~~~~~ii~Dd~~~~~~~~~~~~---~~~~~~  192 (334)
T d2f8ja1         133 -----------EVNVGEGDVVFIPNPN-NPTGHVFE----REEIERI-LKTGAFVALDEAYYEFHGESYVD---FLKKYE  192 (334)
T ss_dssp             -----------CCCCCTTEEEEEESSC-TTTCCCCC----HHHHHHH-HTTTCEEEEECTTGGGTCCCCGG---GGGTCS
T ss_pred             -----------ccccccceEEEecccc-cccceeec----HHHhhcc-ccceeEEeecccchhhccccccc---ccccCc
Confidence                       0011234456666775 45555554    3445444 56799999999987553222111   111122


Q ss_pred             ch---hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh-ccHHHHHHHHHH
Q 010250          334 DL---VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE-RNIVEQVNKIAP  409 (514)
Q Consensus       334 Di---v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~-~~~~~~~~~~~~  409 (514)
                      .+   -++||.++.+++++|++++++++++.+...         ..++..+..+..++.+.++..+. +...+.++++++
T Consensus       193 ~~i~~~S~SK~~~~~G~R~G~~~~~~~~i~~l~~~---------~~~~~~s~~~~~~a~~~l~~~~~~~~~~~~~~~~r~  263 (334)
T d2f8ja1         193 NLAVIRTFSKAFSLAAQRVGYVVASEKFIDAYNRV---------RLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERE  263 (334)
T ss_dssp             SEEEEEESTTTSSCTTTCEEEEEECHHHHHHHHHH---------SCTTCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred             eEEEEecCccccchhhhhhhhcccchHHHHHHHHh---------hcccccchhhhhhcccccccccchhhHHHHHHHHHH
Confidence            22   268998775449999999999999988742         12455667777777776654321 234667778888


Q ss_pred             HHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEEEEeCCCCCCHHHH
Q 010250          410 KFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNIMMSPPFIMSPEEV  489 (514)
Q Consensus       410 ~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~iRi~p~~~~t~e~i  489 (514)
                      ++.+.|+++ +.   .-..+.|.++.+.+...            ....+.+.|+++||++++..++||++   ..|+||+
T Consensus       264 ~l~~~L~~~-g~---~~~~~~g~f~~~~~~~~------------~~~~~~~~L~~~GI~vr~~~~~vRis---~g~~ee~  324 (334)
T d2f8ja1         264 RMKSALREM-GY---RITDSRGNFVFVFMEKE------------EKERLLEHLRTKNVAVRSFREGVRIT---IGKREEN  324 (334)
T ss_dssp             HHHHHHHHH-TC---EECCCCSSEEEEECCHH------------HHHHHHHHHHHTTEECEEETTEEEEE---CCCHHHH
T ss_pred             HHHHHHHHC-CC---eECCCCceEEEEECCCC------------CHHHHHHHHHHCCCEECCCCCeEEEE---cCCHHHH
Confidence            888888876 22   12244566666665432            25668899999999999888999999   3588899


Q ss_pred             HHHHHHHHH
Q 010250          490 DELISKYGK  498 (514)
Q Consensus       490 d~~~~~l~~  498 (514)
                      ++++++|++
T Consensus       325 ~~l~~~l~~  333 (334)
T d2f8ja1         325 DMILRELEV  333 (334)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            998888765

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.78  E-value=7.8e-19  Score=170.79  Aligned_cols=322  Identities=11%  Similarity=0.027  Sum_probs=170.8

Q ss_pred             cCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCC
Q 010250          113 ALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRP  192 (514)
Q Consensus       113 ~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~  192 (514)
                      +.| .||+|++|+.++.......    .++.+...++.++++++++. +.++|+|++||||||..|+..+.        .
T Consensus         9 ~~g-~~P~v~eAl~~~~~~~~~~----y~~~~~~~~lr~~ia~~~g~-~~~~v~~tsggtean~~a~~~~~--------~   74 (340)
T d1svva_           9 SVG-MHPKILDLMARDNMTQHAG----YGQDSHCAKAARLIGELLER-PDADVHFISGGTQTNLIACSLAL--------R   74 (340)
T ss_dssp             SSC-CCHHHHHHHHHHTTCCCCS----TTCSHHHHHHHHHHHHHHTC-TTSEEEEESCHHHHHHHHHHHHC--------C
T ss_pred             CCC-CCHHHHHHHHHHhhcCCCC----CCCCHHHHHHHHHHHHHhCC-CcceEEEcCCHHHHHHHHHHHHh--------h
Confidence            344 6999999999876543221    12456667899999999853 45799999999999999998764        3


Q ss_pred             CccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHH--hCCC
Q 010250          193 NKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILK--EGPE  270 (514)
Q Consensus       193 ~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~--~~~~  270 (514)
                      ...+++.....++................ ...           +..     ....        .++...+...  ....
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----------~~~-----~~~~--------~~~~~~~~~~~~~~~~  129 (340)
T d1svva_          75 PWEAVIATQLGHISTHETGAIEATGHKVV-TAP-----------CPD-----GKLR--------VADIESALHENRSEHM  129 (340)
T ss_dssp             TTEEEEEETTSHHHHSSTTHHHHTTCCEE-EEC-----------CTT-----SCCC--------HHHHHHHHHHSCSTTS
T ss_pred             hccccccccccceeeeecccccccceeee-ecc-----------ccc-----cccc--------chhHHHHhhhhhcccC
Confidence            34455555544443321111111110000 000           000     0000        0111111111  1112


Q ss_pred             cEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccc--cceecccCCCCchhchhhhhcCCccc
Q 010250          271 TIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGT--MFGCDKYSIKPDLVSFAKALSSAYMP  348 (514)
Q Consensus       271 ~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~--~~~~~~~gv~pDiv~~sK~l~gG~~p  348 (514)
                      ....+++...++++|.+. +.+.+..+.+.|+++|+++++|+++.+......  ...........++..+++..+++...
T Consensus       130 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~d~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (340)
T d1svva_         130 VIPKLVYISNTTEVGTQY-TKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFG  208 (340)
T ss_dssp             CEEEEEEEESSCTTSCCC-CHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTCSSC
T ss_pred             Ccceeeeecccccccccc-cHHHhhhhhcccccccceeeeeccceeeeecccccccccccccccceeeecCCcccccccc
Confidence            344455555555555544 456788899999999999999999974322211  11111111112334444444433222


Q ss_pred             ceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeEEE
Q 010250          349 IGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR  428 (514)
Q Consensus       349 ig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~  428 (514)
                      .+...............     ....+++......+.+++.+.++........++...+..+++..|+.+ ...++..  
T Consensus       209 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~p--  280 (340)
T d1svva_         209 EALIILNDALKPNARHL-----IKQRGALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGLEAC-GIRLAWP--  280 (340)
T ss_dssp             EEEEECSGGGCTTHHHH-----HHHTTCCCTTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSC--
T ss_pred             ccccccchhhhhhhhhh-----cccccCccchhhHHHHHHHHHhhhhHHHHHHHHHHHHHhhhHHHHhcC-CCeeecC--
Confidence            22333333332222210     112233444444444444444433223345677777888888888876 2222211  


Q ss_pred             eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEE----EeeC-CEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250          429 GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV----RVSG-DNIMMSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       429 g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~----~~~g-~~iRi~p~~~~t~e~id~~~~~l~~  498 (514)
                      ..+.++.+.+..                .....+.+++...    .+.+ ..|||++++.+|+||||+++++|++
T Consensus       281 ~~~~~v~~~~~~----------------~~~~~l~~~~~~~~~~~~~~~~~~vR~s~~~~~t~edid~~l~~l~~  339 (340)
T d1svva_         281 SASNQLFPILEN----------------TMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEVLKR  339 (340)
T ss_dssp             CSSSEECBEEEH----------------HHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred             CCceEEEEeCCH----------------HHHHHHHHhhhhhcccccCCCCcEEEEECCCCCCHHHHHHHHHHHhc
Confidence            223333333321                2345666665443    3333 3599999999999999999999876

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=1.8e-17  Score=166.98  Aligned_cols=336  Identities=11%  Similarity=0.072  Sum_probs=203.7

Q ss_pred             CCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-CCCC-eEEEeCChhHHHH
Q 010250           99 GKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-SKMA-KVFFTNSGSEAND  176 (514)
Q Consensus        99 G~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~-~v~~~~sGseA~~  176 (514)
                      ++..||+..|..  .+. .++.+++++.+.+++..+.+....+..+....+++.+.+.++. ...+ .+++++++.+|+.
T Consensus        25 ~~~~i~l~~G~P--d~~-~p~~i~~a~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~~I~vt~G~~~al~  101 (382)
T d1u08a_          25 QHQAINLSQGFP--DFD-GPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALY  101 (382)
T ss_dssp             HTTCEECCCSSC--SSC-CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHH
T ss_pred             cCCCEEccCCCC--CCC-CCHHHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHHHHHhCCCCCCCceEEeccchHHHHH
Confidence            345688887743  133 4778999999998765432222233455666677777665532 2234 5999999999999


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCC-CcccCCCCCCChhHHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCP-HYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  255 (514)
                      .+++...        ...+.|++.+++|..........+.....             .+.+ ..|.             .
T Consensus       102 ~~~~~l~--------~~gd~vl~~~p~y~~~~~~~~~~g~~~~~-------------~~~~~~~~~-------------~  147 (382)
T d1u08a_         102 AAITALV--------RNGDEVICFDPSYDSYAPAIALSGGIVKR-------------MALQPPHFR-------------V  147 (382)
T ss_dssp             HHHHHHC--------CTTCEEEEEESCCTTHHHHHHHTTCEEEE-------------EECCTTTCC-------------C
T ss_pred             HHHhhcc--------cccceEEEecccccchhhhhhhcccccee-------------ccccccccc-------------C
Confidence            9998764        44578999999998764433322221100             0000 0000             0


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecc-cCCCCc
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDK-YSIKPD  334 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~-~gv~pD  334 (514)
                      +.+++++.+.   ++..+.+++.| ++.+|.+. +.+.+++|.++|++++++++.||++.-+...+....... ....+|
T Consensus       148 d~~~l~~~~~---~~~~~i~l~~P-~NPtG~v~-~~~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~  222 (382)
T d1u08a_         148 DWQEFAALLS---ERTRLVILNTP-HNPSATVW-QQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRE  222 (382)
T ss_dssp             CHHHHHHHCC---TTEEEEEEESS-CTTTCCCC-CHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHT
T ss_pred             CHHHHhhhhc---cCccEEEECCC-Cccccccc-ccccchhhhhhhccccceeeeecchhhccccccccccccccccccC
Confidence            1345554432   33334455555 45556544 668899999999999999999999875433322111100 000112


Q ss_pred             ----hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHH
Q 010250          335 ----LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIA  408 (514)
Q Consensus       335 ----iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~  408 (514)
                          +.++||.++-.++++|++++++++++.+...       ....+++.+...+.++.++++.-.+  ..+.+.++++.
T Consensus       223 ~~i~~~s~SK~~~~pG~RiG~~v~~~~~~~~~~~~-------~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~  295 (382)
T d1u08a_         223 RAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRKV-------HQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKR  295 (382)
T ss_dssp             TEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHHH-------HHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHH
T ss_pred             cEEEEeeccccccCCcccchhhhccchhHHHHHhh-------hcccccccccccccccccccccchHHHHHHHHHHHhhh
Confidence                2368897764449999999999998877531       2234566677777777777763221  23455666666


Q ss_pred             HHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEee--------C-CEEE
Q 010250          409 PKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVS--------G-DNIM  477 (514)
Q Consensus       409 ~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~--------g-~~iR  477 (514)
                      +.+.+.++..   . +..+... |.++++.+......         ....++++| .+.||++.|+        + +.+|
T Consensus       296 ~~l~~~~~~~---g-~~~~~p~gg~~~~~~~~~~~~~---------d~~e~~~~ll~e~gV~v~PG~~F~~~~~~~~~~R  362 (382)
T d1u08a_         296 DILVNALNES---R-LEILPCEGTYFLLVDYSAVSTL---------DDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIR  362 (382)
T ss_dssp             HHHHHHTTSS---S-CEECCCCBSSEEEEECTTTCCS---------CHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEE
T ss_pred             hhhhhhhccC---C-cEEecCCceEEEEEecCCCCCC---------CHHHHHHHHHHHCCEEEEcchhhCCCCCCCCEEE
Confidence            6666655432   2 2223334 55667776542211         134566766 4679999874        1 3699


Q ss_pred             EeCCCCCCHHHHHHHHHHHHH
Q 010250          478 MSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       478 i~p~~~~t~e~id~~~~~l~~  498 (514)
                      |+  +..++|+|++++++|++
T Consensus       363 is--~~~~~e~l~~al~RL~~  381 (382)
T d1u08a_         363 LC--FAKKESTLLAAAERLRQ  381 (382)
T ss_dssp             EE--CCSCHHHHHHHHHHHTT
T ss_pred             EE--EeCCHHHHHHHHHHHhC
Confidence            99  67789999999998865

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=9.1e-18  Score=169.35  Aligned_cols=326  Identities=14%  Similarity=0.116  Sum_probs=199.6

Q ss_pred             CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEE
Q 010250          118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF  197 (514)
Q Consensus       118 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~i  197 (514)
                      +|+|++|+..    ...+|+. ....+...+..+.|+++++..+...++|+.|||+|++.++....        .+++++
T Consensus        31 ~~~Vl~am~~----~~i~HRs-~~f~~i~~ea~~~l~~llg~~~~~~ii~~gsgT~a~~~~i~~l~--------~~~~~~   97 (388)
T d1h0ca_          31 PPRIMAAGGL----QMIGSMS-KDMYQIMDEIKEGIQYVFQTRNPLTLVISGSGHCALEAALVNVL--------EPGDSF   97 (388)
T ss_dssp             CHHHHHHHTC----CCCCTTS-HHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHC--------CSSCCE
T ss_pred             CHHHHHHhCc----CCCCCCC-HHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHhh--------ccCCce
Confidence            6888877642    1222221 11235567788888888864444468999999999999998764        446678


Q ss_pred             EEEecCCcccceeeeec-CCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 010250          198 IARQKSYHGSTLIAASL-SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFI  276 (514)
Q Consensus       198 i~~~~~yHG~t~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavi  276 (514)
                      ++...++++........ .+.....            +..+.      ... .+      .++++..+...   ++..+.
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~------~~~-~~------~~~~~~~~~~~---~~~~v~  149 (388)
T d1h0ca_          98 LVGANGIWGQRAVDIGERIGARVHP------------MTKDP------GGH-YT------LQEVEEGLAQH---KPVLLF  149 (388)
T ss_dssp             EECBSSHHHHHHHHHHHHHC--CBC------------CBCCT------TCC-CC------HHHHHHHHHHH---CCSEEE
T ss_pred             eeecccceeeeeccccccccccccc------------cccCC------ccc-cc------hHHHHHHhccC---CcceEE
Confidence            88777776653222111 0100000            00000      000 00      23444444332   345677


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEEe
Q 010250          277 AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILV  354 (514)
Q Consensus       277 vEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~  354 (514)
                      +..+.+.+|++.|    +++|.++|++||+++++|.+|+ +|..    .++......|++++|  |+++|. ..+|+++.
T Consensus       150 ~~~~~n~tG~i~p----i~~i~~~~~~~g~~~~vD~~qs-~g~~----~~d~~~~~~D~~~~s~~K~~~gp-~g~~~~~~  219 (388)
T d1h0ca_         150 LTHGESSTGVLQP----LDGFGELCHRYKCLLLVDSVAS-LGGT----PLYMDRQGIDILYSGSQKALNAP-PGTSLISF  219 (388)
T ss_dssp             EESEETTTTEECC----CTTHHHHHHTTTCEEEEECTTT-TTTS----CCCTTTTTCSEEEEESSSTTCCC-TTCEEEEE
T ss_pred             EeeeeeccccccC----HHHHHHHhhcccccceeccccc-cccc----cccccccccceecccccccccCC-CceEEEee
Confidence            7788888999988    8999999999999999999998 5432    333344456887765  888775 45678888


Q ss_pred             CHHHHHHhhhccCCCCcc---------------ccc-CCCCCcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhh
Q 010250          355 SPEVSEVIHSQSNTLGSF---------------SHG-FTYSGHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGV  415 (514)
Q Consensus       355 ~~~i~~~l~~~~~~~~~~---------------~~~-~t~~~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L  415 (514)
                      ++...+.+.........+               ..+ +....+..+..+..++++.+.+.   ...++..++.+++++.+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~al~~~~~~g~~~~~~~~~~l~~~l~~~~  299 (388)
T d1h0ca_         220 SDKAKKKMYSRKTKPFSFYLDIKWLANFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAAYLHGRL  299 (388)
T ss_dssp             CHHHHHHHTTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHhhhhccccccccccccchhhhhhhhccccccccccccHHHHHHHHHHHHHHHHhccccccccccchhHHHHHHH
Confidence            998887765432111100               001 11223445666677778777654   34566777788888888


Q ss_pred             hhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC-CcEEEee-----CCEEEEe-CCCCCCHH
Q 010250          416 KAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH-GMLVRVS-----GDNIMMS-PPFIMSPE  487 (514)
Q Consensus       416 ~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-Gv~~~~~-----g~~iRi~-p~~~~t~e  487 (514)
                      +.+.......+. .....+..+.+++..           ....+...|.++ ||.++.+     ++.||++ ....+|+|
T Consensus       300 ~~~g~~~~~~~~~~rs~~i~~~~~p~~~-----------~~~~~~~~L~~~~gI~v~~G~~~~~~~~iRis~~g~~~t~e  368 (388)
T d1h0ca_         300 QALGLQLFVKDPALRLPTVTTVAVPAGY-----------DWRDIVSYVIDHFDIEIMGGLGPSTGKVLRIGLLGCNATRE  368 (388)
T ss_dssp             HHHTCCBSSCSGGGBCTTEEEEECCTTC-----------CHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHH
T ss_pred             hhcCcccccCCHHHcCCeEEEEECCCCC-----------CHHHHHHHHHhcCCEEEeCCchhhcCCEEEEeCCCCCCCHH
Confidence            776221222111 112234566654321           144566777654 9888753     4679999 55788999


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 010250          488 EVDELISKYGKALKATEE  505 (514)
Q Consensus       488 ~id~~~~~l~~~l~~~~~  505 (514)
                      |||+++++|+++|+++.+
T Consensus       369 did~li~aL~~~L~~l~k  386 (388)
T d1h0ca_         369 NVDRVTEALRAALQHCPK  386 (388)
T ss_dssp             HHHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHHHHhcc
Confidence            999999999999987654

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.76  E-value=1.1e-17  Score=167.07  Aligned_cols=334  Identities=15%  Similarity=0.163  Sum_probs=183.1

Q ss_pred             CCCCHHHHHHHHHHHhcCCcccccc-------ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHh
Q 010250          115 GGSEPRLVAAATAQLNTLPFYHSFW-------NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNN  187 (514)
Q Consensus       115 Gh~~p~v~~A~~~~l~~~~~~~~~~-------~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~  187 (514)
                      |.-.|++++|+.+..+..+. ..+.       ....+.+..+++++++++   +.+.+++++||++|+..++....    
T Consensus        12 ~~l~~~a~~a~~~~~~g~~~-~~~~~~~~~~~~~~~~l~~~~~~~~A~~~---g~e~~~~t~g~t~a~~~~~~al~----   83 (364)
T d2e7ja1          12 GKLTEEARQALLEWGDGYSV-CDFCTTGRLDEIKTPPIHDFIHNQLPKFL---GCDVARVTNGAREAKFAVMHSLA----   83 (364)
T ss_dssp             CCCCHHHHHHHHHC---------------------CCHHHHHHTHHHHHT---TSSEEEEESSHHHHHHHHHHHHC----
T ss_pred             CcCCHHHHHHHHHHhcCCch-hccccccccccccChHHHHHHHHHHHHHh---CcCEEEEECcHHHHHHHHHHHHh----
Confidence            34468888888764322110 0000       011235677889999987   46899999999999999998652    


Q ss_pred             hcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh
Q 010250          188 ALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE  267 (514)
Q Consensus       188 ~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~  267 (514)
                          .+++.||+.+++|+. ...++...|....            .++..+...+           ..+++++++++.+.
T Consensus        84 ----~~gd~Vi~~~~~h~s-~~~~~~~~g~~v~------------~v~~~~~~~~-----------~i~~~~l~~~i~~~  135 (364)
T d2e7ja1          84 ----KKDAWVVMDENCHYS-SYVAAERAGLNIA------------LVPKTDYPDY-----------AITPENFAQTIEET  135 (364)
T ss_dssp             ----CTTCEEEEETTCCHH-HHHHHHHTTCEEE------------EECCCCTTTC-----------CCCHHHHHHHHHHH
T ss_pred             ----CCCcEEEeecccccc-cchHHHhccceEE------------Eeeecccccc-----------ccCHHHHHhhhhhh
Confidence                234567776655543 3222323332211            1111100000           01257888888664


Q ss_pred             C-CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhch--hhhhcC
Q 010250          268 G-PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSS  344 (514)
Q Consensus       268 ~-~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~g  344 (514)
                      . ...+.+|+++.+++++|.+.|    +++|.++|++||+++|+||+|+ +|..+.  ....+  ..|++++  +|.+++
T Consensus       136 ~k~~~~~lv~i~~~~n~tG~~~~----l~~I~~ia~~~~i~livD~a~~-~g~~~~--~~~~~--g~D~~~~S~~K~~~~  206 (364)
T d2e7ja1         136 KKRGEVVLALITYPDGNYGNLPD----VKKIAKVCSEYDVPLLVNGAYA-IGRMPV--SLKEI--GADFIVGSGHKSMAA  206 (364)
T ss_dssp             TTTSCEEEEEEESSCTTTCCCCC----HHHHHHHHHTTTCCEEEECTTT-BTTBCC--CHHHH--TCSEEEEEHHHHSSC
T ss_pred             cccCCceEEEeecCCCCCceeec----chhheeccccccchhhccccch-hhhhhh--ccccc--ccceeeeccccccCC
Confidence            3 346788888888899999887    9999999999999999999996 554432  11222  3577765  599987


Q ss_pred             CcccceeEEeCHHHHHHhhhccCCCCc---ccccCCCCCcHHHHHHHHHHHHHHhhc-cHHHHHHHHHHHHHhhhhhccC
Q 010250          345 AYMPIGAILVSPEVSEVIHSQSNTLGS---FSHGFTYSGHPVSCAVAIEALKIYKER-NIVEQVNKIAPKFQDGVKAFSD  420 (514)
Q Consensus       345 G~~pig~v~~~~~i~~~l~~~~~~~~~---~~~~~t~~~~pl~~aaa~aal~~~~~~-~~~~~~~~~~~~l~~~L~~l~~  420 (514)
                      + .++|++++++++++.+.........   ...+.+..+.  ...+..++++.+.+. +......++.+++.+.|+++. 
T Consensus       207 ~-g~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~g-  282 (364)
T d2e7ja1         207 S-GPIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGA--TIITLMASFPHVRERIKRWDEEVEKARRFAAEMEKLG-  282 (364)
T ss_dssp             C-SSCEEEEECTTTTTTTTCBCSSCTTSBGGGTTCCCCSH--HHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHTT-
T ss_pred             C-CCEEEEEECHHHHHHHHhhccccCcccccccccccchh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-
Confidence            5 3688999999887766432211110   0111222222  223334455544321 222333345667777777651 


Q ss_pred             CCcee-EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--CEEEEeCCCCCCHHHHHHHHHHHH
Q 010250          421 SPIIG-EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--DNIMMSPPFIMSPEEVDELISKYG  497 (514)
Q Consensus       421 ~~~~~-~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--~~iRi~p~~~~t~e~id~~~~~l~  497 (514)
                      ..... ...... +..+........   ..........+...+.++|+.....+  ..+|++ .+..|+||||+++++|+
T Consensus       283 ~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~-~~~~t~edid~~~~~l~  357 (364)
T d2e7ja1         283 IKQLGDNPHNHD-LMFFHAEVLYEI---SKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLS-TYGLSDEEVDYVLNAFK  357 (364)
T ss_dssp             CEEESSSSCCSS-EEEEECHHHHHH---HHHSSSGGGHHHHHHHHTTEECSCTTCCSEEEEE-CTTCCHHHHHHHHHHHH
T ss_pred             CeecCCCCCCcc-eEEEeccchHHH---HHHhhccchHHHHHHHhcCCceecCCCcceEEEe-ccCCCHHHHHHHHHHHH
Confidence            11000 000001 111111100000   00000012234556677777654333  346666 35679999999999999


Q ss_pred             HHHHH
Q 010250          498 KALKA  502 (514)
Q Consensus       498 ~~l~~  502 (514)
                      +++++
T Consensus       358 ei~~~  362 (364)
T d2e7ja1         358 EIIEK  362 (364)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=99.75  E-value=6.7e-17  Score=165.30  Aligned_cols=306  Identities=13%  Similarity=0.104  Sum_probs=175.6

Q ss_pred             CchHHHHHHHHHHhcCc---CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcc
Q 010250          143 TKPSLDLAKELLEMFTA---SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPA  219 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~---~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~  219 (514)
                      .+....+++.+.+.++.   .+.++|++++++++|+..++....        ..++.|++.+++|++.........|...
T Consensus        86 ~~LR~aiA~~l~~~~~~~~~~~~e~Ivit~G~~~al~~~~~~l~--------~~Gd~Vlv~~P~y~~~~~~~~~~~g~~~  157 (428)
T d1iaya_          86 PEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLA--------DPGDAFLVPSPYYPAFNRDLRWRTGVQL  157 (428)
T ss_dssp             HHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHC--------CTTCEEEEESSCCTTHHHHTTTTTCCEE
T ss_pred             HHHHHHHHHHHHHHhCCCCCCChhhEEEcCCHHHHHHHHHHHhC--------CCCCEEEEccCCchHHHHHHHHhcCCeE
Confidence            34555566666655432   246799999999999999987663        3357899999999876432222222211


Q ss_pred             ccCCCCCCCCcccccCCC--CcccCCCCCCChhHHHHHHHHHHHHHH---HHhCCCcEEEEEEccccCCCCcccCChhHH
Q 010250          220 LHQKFDLPAPFVLHTDCP--HYWRYAHPGETEEEYSTRLANNLEDLI---LKEGPETIAAFIAEPVIGAGGVIPPPATYF  294 (514)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~le~li---~~~~~~~~aavivEpv~~~~G~~~p~~~~L  294 (514)
                      .            .+++.  +.|..     +        .++++..+   .+..++..+.+++.|. +.+|.+ .+++.+
T Consensus       158 v------------~v~~~~~~~~~~-----d--------~~~~~~~~~~~~~~~~~~~~~~l~nP~-NPtG~~-~s~~~~  210 (428)
T d1iaya_         158 I------------PIHCESSNNFKI-----T--------SKAVKEAYENAQKSNIKVKGLILTNPS-NPLGTT-LDKDTL  210 (428)
T ss_dssp             E------------EECCCTTTTTCC-----C--------HHHHHHHHHHHHHTTCCEEEEEEESSC-TTTCCC-CCHHHH
T ss_pred             E------------Eeeccccccccc-----c--------cccccchhhhhhccCCCceEEEEccCC-Cccccc-cccccc
Confidence            1            11111  11110     0        23333332   2233334445555564 555644 467889


Q ss_pred             HHHHHHHHhcCCEEEEechhcCcccccccce-e-cc------cCCCCc----hhchhhhhcCCcccceeEEe-CHHHHHH
Q 010250          295 EKVQAVVKKYDILFIADEVICAFGRLGTMFG-C-DK------YSIKPD----LVSFAKALSSAYMPIGAILV-SPEVSEV  361 (514)
Q Consensus       295 ~~l~~l~~~~gillI~DEv~tG~gr~G~~~~-~-~~------~gv~pD----iv~~sK~l~gG~~pig~v~~-~~~i~~~  361 (514)
                      ++|.++|++||+++|+||+|..+...+..+. . +.      ....+|    +-++||.++.+++++|++++ ++.+.+.
T Consensus       211 ~~i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~GlRiG~~~~~~~~l~~~  290 (428)
T d1iaya_         211 KSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNC  290 (428)
T ss_dssp             HHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHH
T ss_pred             chhheeeccCcEEEEecccccccccCcccccccccccchhhccccccceEEEEecCCCcccCCCcccccccccccchhhh
Confidence            9999999999999999999997755443221 1 10      111233    22689987654499999998 4566666


Q ss_pred             hhhccCCCCcccccCCCCCcHHHHHHHHHHH---HHHhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEE
Q 010250          362 IHSQSNTLGSFSHGFTYSGHPVSCAVAIEAL---KIYKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGT  436 (514)
Q Consensus       362 l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal---~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i  436 (514)
                      +...       .  .....+.....++.+.+   +.+++  ++..+.++++.+.+.+.|+.. +.++.  ...-|.++++
T Consensus       291 ~~~~-------~--~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~l~~r~~~~~~~L~~~-gi~~~--~p~gg~f~w~  358 (428)
T d1iaya_         291 ARKM-------S--SFGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCL--KNNAGLFCWM  358 (428)
T ss_dssp             HHHH-------H--TTSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBC--CCSSSSEEEE
T ss_pred             hhhh-------h--cccccccccccchhhhhhhhccccccccccccccchhHHHHHHHHHhC-CCEEe--cCCcceEEEE
Confidence            6531       1  11112222222222222   12211  234556667777788877654 22222  1223677888


Q ss_pred             EEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          437 EFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-------GDNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       437 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-------g~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      ++......     ........+++.|++ .||++.|+       .+++||+. ...++++|++++++|++++.
T Consensus       359 ~l~~~~~~-----~~~~~~~~l~~~Ll~~~gV~v~PG~~F~~~~~g~~Ris~-a~~~~~~l~~al~Rl~~~l~  425 (428)
T d1iaya_         359 DLRPLLRE-----STFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCF-ANMDDGTVDIALARIRRFVG  425 (428)
T ss_dssp             ECGGGCSS-----SSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEEC-SSSCHHHHHHHHHHHHHHHH
T ss_pred             ECcccccc-----CCCCCHHHHHHHHHHhCCEEEEcchhcCCCCCCEEEEEe-CCCCHHHHHHHHHHHHHHHh
Confidence            88643211     111123346677764 69999874       25699993 13577889999999999885

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=99.75  E-value=6.7e-17  Score=165.47  Aligned_cols=308  Identities=12%  Similarity=0.101  Sum_probs=175.6

Q ss_pred             CchHHHHHHHHHHhcCc---CCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcc
Q 010250          143 TKPSLDLAKELLEMFTA---SKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPA  219 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~---~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~  219 (514)
                      .+....+++.+.+.+..   .+.++|++++++++|++.+++...        ..++.|++.+++|++.........|...
T Consensus        87 ~~LR~aiA~~l~~~~~~~~~~~pe~I~it~G~~~al~~~~~~l~--------~pGd~Vlv~~P~y~~~~~~~~~~~g~~~  158 (431)
T d1m7ya_          87 PAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLA--------DPGEAVLIPTPYYPGFDRDLKWRTGVEI  158 (431)
T ss_dssp             HHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHC--------CTTCEEEEEESCCTTHHHHTTTTTCCEE
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCcceEEECCCHHHHHHHHHHHhc--------CCCCEEEEeCCCchhHHHHHHHhcCcee
Confidence            34455566666655431   246799999999999999998763        2347899999999876433322222211


Q ss_pred             ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHH---hCCCcEEEEEEccccCCCCcccCChhHHHH
Q 010250          220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILK---EGPETIAAFIAEPVIGAGGVIPPPATYFEK  296 (514)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~---~~~~~~aavivEpv~~~~G~~~p~~~~L~~  296 (514)
                      .            .+++.....+.+           +.+.+++.+.+   .+....+.++..| ++.+|.+ .+++.+++
T Consensus       159 v------------~v~~~~~~~~~l-----------~~~~~~~~~~~~~~~~~~~~~i~~~nP-~NPtG~~-~s~~~l~~  213 (431)
T d1m7ya_         159 V------------PIHCTSSNGFQI-----------TETALEEAYQEAEKRNLRVKGVLVTNP-SNPLGTT-MTRNELYL  213 (431)
T ss_dssp             E------------EEECCGGGTSCC-----------CHHHHHHHHHHHHHTTCCEEEEEEESS-CTTTCCC-CCHHHHHH
T ss_pred             c------------cccccchhcccc-----------cHHHhhhhhhhhhhccCcceEEEecCc-ccccccc-cccccccc
Confidence            1            011110000000           02445544432   2333334455555 4555544 46789999


Q ss_pred             HHHHHHhcCCEEEEechhcCccccccccee--c---ccCC-----CCc-hh---chhhhhcCCcccceeEEeCHHHHHHh
Q 010250          297 VQAVVKKYDILFIADEVICAFGRLGTMFGC--D---KYSI-----KPD-LV---SFAKALSSAYMPIGAILVSPEVSEVI  362 (514)
Q Consensus       297 l~~l~~~~gillI~DEv~tG~gr~G~~~~~--~---~~gv-----~pD-iv---~~sK~l~gG~~pig~v~~~~~i~~~l  362 (514)
                      |.++|++||+++|+||+|..+-..+..+..  +   ....     ..+ ++   ++||.++..++++|+++++++++...
T Consensus       214 i~~~a~~~~~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~RiG~~~~~~~~i~~~  293 (431)
T d1m7ya_         214 LLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAA  293 (431)
T ss_dssp             HHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHTTTTTCSSSSSGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHH
T ss_pred             ccccccccCcceeecccccccccCCCCCCCHHHHhhhcccccccccCceEEEEecCcccccCCCCccceeccchhhhHHH
Confidence            999999999999999999877544432211  0   0011     011 22   58998874348999999988765444


Q ss_pred             hhccCCCCcccccCCCCCcHHHHHHHHHHH---HHHhh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEE
Q 010250          363 HSQSNTLGSFSHGFTYSGHPVSCAVAIEAL---KIYKE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGT  436 (514)
Q Consensus       363 ~~~~~~~~~~~~~~t~~~~pl~~aaa~aal---~~~~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i  436 (514)
                      ...       .. .....++....++.+.+   +..++  ++...+++++.+.+.+.|++.   . +..+.+. |.++++
T Consensus       294 ~~~-------~~-~~~~~~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---g-i~~~~p~gg~f~w~  361 (431)
T d1m7ya_         294 ATK-------MS-SFGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS---G-ISCLNGNAGLFCWV  361 (431)
T ss_dssp             HHH-------HG-GGSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---T-CEECCCCSSSEEEE
T ss_pred             HHH-------Hh-ccccccccccchhhhhhccchhhhhhhhhhhhhhhhhhhhhhhhhhcC---C-cEEecCCceeEEEE
Confidence            321       11 12222222222222222   22211  223455666666777776653   2 2222333 667788


Q ss_pred             EEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-------CCEEEEeCCCC-CCHHHHHHHHHHHHHHHHH
Q 010250          437 EFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-------GDNIMMSPPFI-MSPEEVDELISKYGKALKA  502 (514)
Q Consensus       437 ~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-------g~~iRi~p~~~-~t~e~id~~~~~l~~~l~~  502 (514)
                      ++.......     .......++++|+ +.||++.|+       .+++||+  +. .+++++++++++|++++++
T Consensus       362 ~l~~~~~~~-----~~~~~~~l~~~ll~~~gV~v~PG~~F~~~~~~~~Ri~--~a~~~e~~l~~al~rL~~~l~~  429 (431)
T d1m7ya_         362 DMRHLLRSN-----TFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVC--FANLPERTLDLAMQRLKAFVGE  429 (431)
T ss_dssp             ECGGGSSSS-----SHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEE--CSSSCHHHHHHHHHHHHHHHHH
T ss_pred             ECccccccC-----cccCHHHHHHHHHHHCCEEEEeccccCCCCCCEEEEE--eCcCCHHHHHHHHHHHHHHHHH
Confidence            886532111     1112334666665 569999874       2579999  54 5778999999999999876

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=99.72  E-value=3.3e-16  Score=155.99  Aligned_cols=280  Identities=14%  Similarity=0.180  Sum_probs=174.3

Q ss_pred             HHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCC
Q 010250          146 SLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFD  225 (514)
Q Consensus       146 ~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~  225 (514)
                      ..+|.+.|++.++ .+.++|++++|++||+..+++...       .+++..|++..++|..........+. ...     
T Consensus        58 ~~~Lr~~ia~~~g-v~pe~I~it~Gs~eai~~~~~~~~-------~pgd~~Vl~~~P~y~~~~~~~~~~g~-~v~-----  123 (354)
T d1fg7a_          58 PKAVIENYAQYAG-VKPEQVLVSRGADEGIELLIRAFC-------EPGKDAILYCPPTYGMYSVSAETIGV-ECR-----  123 (354)
T ss_dssp             CHHHHHHHHHHHT-SCGGGEEEESHHHHHHHHHHHHHC-------CTTTCEEEECSSSCTHHHHHHHHHTC-EEE-----
T ss_pred             HHHHHHHHHHHhC-CChHHeeeccCchHHHHHHHHHhh-------ccccccccccccccccchhhhhccCc-eee-----
Confidence            3688889998874 567899999999999999998762       24445688888999876543333222 110     


Q ss_pred             CCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcC
Q 010250          226 LPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYD  305 (514)
Q Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~g  305 (514)
                             .++..+.|..             +.++++..+     .++.++++.+.++.+|.+. +++.++.+.+.|+ ++
T Consensus       124 -------~~~~~~~~~~-------------d~~~l~~~~-----~~~~~v~~~~pnNPtG~~~-~~~~~~~~~~~~~-~~  176 (354)
T d1fg7a_         124 -------TVPTLDNWQL-------------DLQGISDKL-----DGVKVVYVCSPNNPTGQLI-NPQDFRTLLELTR-GK  176 (354)
T ss_dssp             -------ECCCCTTSCC-------------CHHHHHTSC-----TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHT-TT
T ss_pred             -------cccccccccc-------------chhhhhhcc-----cccceeeccCCCccceeEe-eeccccccccccc-cc
Confidence                   1111111111             023343322     3466666666667777665 4566777777665 56


Q ss_pred             CEEEEechhcCcccccccceecccCCCCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcH
Q 010250          306 ILFIADEVICAFGRLGTMFGCDKYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHP  382 (514)
Q Consensus       306 illI~DEv~tG~gr~G~~~~~~~~gv~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~p  382 (514)
                      .++|+||.+..|......  .......+.++   +|||.++-+++++|++++++++++.+...         ...+..+.
T Consensus       177 ~~~iidd~~~~f~~~~~~--~~~~~~~~~~iv~~S~SK~~~laGlRiGy~i~~~~~i~~l~~~---------~~~~~~~~  245 (354)
T d1fg7a_         177 AIVVADEAYIEFCPQASL--AGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKV---------IAPYPLST  245 (354)
T ss_dssp             CEEEEECTTGGGSGGGCS--GGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECHHHHHHHHHH---------SCSSCSCH
T ss_pred             ccccccccchhhcccccc--chhhcccccceEEeCCccccCCCccccccccccchhhhhhhhh---------cCccchhh
Confidence            778888887766432211  11222233333   79998874339999999999999988642         12344454


Q ss_pred             HHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHH
Q 010250          383 VSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYF  458 (514)
Q Consensus       383 l~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~  458 (514)
                      .++.++.+++..-..   ....+++.+.++++.+.|.++   +....+ ...|.++.+++.+              ...+
T Consensus       246 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~---~~~~~~~p~~~~f~~~~~~~--------------~~~~  308 (354)
T d1fg7a_         246 PVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEI---PCVEQVFDSETNYILARFKA--------------SSAV  308 (354)
T ss_dssp             HHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHS---TTEEEECCCSSSEEEEEETT--------------HHHH
T ss_pred             HHHHHHHHHHhhhccccccccchhhhhHHHHHHHHHHhC---CCcceeCCCCceEEEEeCCC--------------HHHH
Confidence            444444444322111   223455666677777777765   433333 3345677777642              3457


Q ss_pred             HHHHHHCCcEEEeeC------CEEEEeCCCCCCHHHHHHHHHHHH
Q 010250          459 GAQCEKHGMLVRVSG------DNIMMSPPFIMSPEEVDELISKYG  497 (514)
Q Consensus       459 ~~~l~~~Gv~~~~~g------~~iRi~p~~~~t~e~id~~~~~l~  497 (514)
                      .+.|+++||++++++      +++|++   ..|++|.++++++|+
T Consensus       309 ~~~L~~~gIlvr~~~~~~~~~~~lRis---igt~ee~~~~l~aLk  350 (354)
T d1fg7a_         309 FKSLWDQGIILRDQNKQPSLSGCLRIT---VGTREESQRVIDALR  350 (354)
T ss_dssp             HHHHHHTTEECEECTTSTTCTTEEEEE---CCCHHHHHHHHHHHH
T ss_pred             HHHHHHCCcEEecCCCCCCCCCEEEEE---eCCHHHHHHHHHHHh
Confidence            889999999998643      579999   458899888888775

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.71  E-value=2e-16  Score=162.49  Aligned_cols=351  Identities=13%  Similarity=0.106  Sum_probs=191.0

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV  179 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al  179 (514)
                      ..+||+.|-.++.       ...+++..++..+.-.   |+ -.+...+|++++++++   +.+.++|++||+.|+..|+
T Consensus        42 ~v~iDl~sDs~t~-------am~~~~~aa~~~GDd~---Y~-~dpt~~~lE~~~a~l~---G~e~al~~~SGt~An~~a~  107 (456)
T d1c7ga_          42 DIYIDLLTDSGTN-------AMSDKQWAGMMIGDEA---YA-GSENFYHLEKTVKELF---GFKHIVPTHQGRGAENLLS  107 (456)
T ss_dssp             GCSEECSCSSSCC-------CEEHHHHHHTTSCCCC---SS-SCHHHHHHHHHHHHHH---CCSEEEEESSHHHHHHHHH
T ss_pred             ceeeEcccCCCcc-------cchHHHHHHHhccchh---cc-CCchHHHHHHHHHHHh---CCCeEEECCCHHHHHHHHH
Confidence            4578998875531       1223333333332211   22 3456789999999998   6789999999999999999


Q ss_pred             HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCC-CccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHH
Q 010250          180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSG-LPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLAN  258 (514)
Q Consensus       180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (514)
                      +...         ++.+.|.....|+.... .....| .+...     ..........++.|+.           ..+++
T Consensus       108 ~~l~---------~~Gd~Vi~~~~f~~~~~-~i~~~g~~~~~~-----~~~~~~~~~~~~~~~~-----------~~d~~  161 (456)
T d1c7ga_         108 QLAI---------KPGQYVAGNMYFTTTRF-HQEKNGATFVDI-----VRDEAHDASLNLPFKG-----------DIDLN  161 (456)
T ss_dssp             HHHC---------CTTEEEEESSCCHHHHH-HHHHTTEEEEEC-----BCGGGGCTTCCCSCTT-----------CBCHH
T ss_pred             HHhc---------CCCCeEecCcchHHHHH-HHHHcCceeeec-----cccccccccccCCccc-----------cCCHH
Confidence            8652         23344444433433211 111111 00000     0000000000111111           11268


Q ss_pred             HHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccc-ccc-ceecccCC-----
Q 010250          259 NLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRL-GTM-FGCDKYSI-----  331 (514)
Q Consensus       259 ~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~-G~~-~~~~~~gv-----  331 (514)
                      .|++.|....++.++.+++|..++.+|..+.+.+++++|+++|++||+.+|.|+++. +|-. ... ....+.+.     
T Consensus       162 ~le~~I~~~~~~~~~~i~~e~~~n~~gG~~~~~~~l~~i~~~a~~~~~~~~~D~a~~-~~~a~~~~~~~~~~~~~~i~~i  240 (456)
T d1c7ga_         162 KLATLIKEKGAENIAYICLAVTVNLAGGQPVSMANMRAVHEMASTYGIKIFYDATRC-VENAYFIKEQEAGYENVSIKDI  240 (456)
T ss_dssp             HHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTH-HHHHHHHHHHSTTCTTSCHHHH
T ss_pred             HHHHHhhhcCCccceeEEeeecccccccceecHHHHHHHHHHHHHcCCEEEEEcchh-hcchhhhcccccccCCCChhhh
Confidence            899999888777899999999888887788889999999999999999999999976 2110 000 00001111     


Q ss_pred             ------CCchhch--hhhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCc-HHHHHHHHHHHHHHhhccHH
Q 010250          332 ------KPDLVSF--AKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGH-PVSCAVAIEALKIYKERNIV  401 (514)
Q Consensus       332 ------~pDiv~~--sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~-pl~~aaa~aal~~~~~~~~~  401 (514)
                            ..|++++  +|.++++.  -|+++.+ +++.+.++...   .......++++. ...+.+....+....+.+..
T Consensus       241 ~~~~~~~ad~~s~s~~K~~~~~~--GG~i~~~~~~l~~~~r~~~---~~~~g~~~~g~~~~~~~~a~a~~l~e~~~~~~l  315 (456)
T d1c7ga_         241 VHEMFSYADGCTMSGKKDCLVNI--GGFLCMNDEEMFSAAKELV---VVYEGMPSYGGLAGRDMEAMAIGLREAMQYEYI  315 (456)
T ss_dssp             HHHHHTTCSEEEEETTTTTCCSS--CEEEEESCHHHHHHHHHHH---HHHTCCTTTTTCCHHHHHHHHHHHHHHTCHHHH
T ss_pred             ccccccccccEEEeccccccccc--eeEEEcCCHHHHHHHHHhc---cccCCCcccchhhHHHHHHHHHHHHHhcCHHHH
Confidence                  2466655  46665431  2445554 45666554210   001112233333 23333333334444444556


Q ss_pred             HHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchH-HHHHHHHHHCCcEEEeeC-------
Q 010250          402 EQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIG-AYFGAQCEKHGMLVRVSG-------  473 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~Gv~~~~~g-------  473 (514)
                      ++..++.++|.++|.+. ..+++...  .+....++...... .  .+.....+ ......+.+.||...+.+       
T Consensus       316 ~~r~~~~~~L~e~L~~~-g~~vv~p~--g~~~v~vda~~~~~-~--i~~~~~~~~~~~~~l~~~~GIr~~~~g~~~~~~~  389 (456)
T d1c7ga_         316 EHRVKQVRYLGDKLREA-GVPIVEPT--GGHAVFLDARRFCP-H--LTQDQFPAQSLAASIYMETGVRSMERGIVSAGRS  389 (456)
T ss_dssp             HHHHHHHHHHHHHHHHT-TCCBCSSC--CSSEEEEEHHHHCT-T--SCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBC
T ss_pred             HHHHHHHHHHHHHHHhc-cCCcccCC--CCcceeEechhhcc-C--CCcccccHHHHHHHHHHHhCeeecccCccccccC
Confidence            66667778899999876 33433221  22233333221110 0  01111112 234444567787654221       


Q ss_pred             -----------CEEEEeCC-CCCCHHHHHHHHHHHHHHHHH
Q 010250          474 -----------DNIMMSPP-FIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       474 -----------~~iRi~p~-~~~t~e~id~~~~~l~~~l~~  502 (514)
                                 +.+||+.| ...|+++||.++++|+++.++
T Consensus       390 ~~~g~~~~~~~e~vRLaip~~~~T~e~iD~Vae~i~~v~~~  430 (456)
T d1c7ga_         390 KETGENHRPKLETVRLTIPRRVYTYAHMDVVADGIIKLYQH  430 (456)
T ss_dssp             SSSCCBCCCSCCEEEEECCTTSCCHHHHHHHHHHHHHHHTT
T ss_pred             CcccCccCCccceEEEecCcccCCHHHHHHHHHHHHHHHhh
Confidence                       35899977 456999999999999887753

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.71  E-value=3.8e-16  Score=158.08  Aligned_cols=343  Identities=15%  Similarity=0.099  Sum_probs=202.5

Q ss_pred             CCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCc-c-cccc--ccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhH
Q 010250           98 NGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPF-Y-HSFW--NRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSE  173 (514)
Q Consensus        98 dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~-~-~~~~--~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGse  173 (514)
                      ++..|||..+      .|..+..|.+++.+.+.+... . ...+  ....+...+..++++++++ .+.++++|++++|+
T Consensus        26 ~~~iYLd~as------~g~~p~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~e~~R~~iA~llg-a~~~ei~~~~~~T~   98 (404)
T d1qz9a_          26 EGVIYLDGNS------LGARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIG-ARDGEVVVTDTTSI   98 (404)
T ss_dssp             TTCEECCTTT------SCCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTT-CCTTSEEECSCHHH
T ss_pred             CCCEEcCCcc------cccCCHHHHHHHHHHHHHHhcccCcccccchhHHHHHHHHHHHHHHHhC-CCCCcEEEecCchH
Confidence            4567888643      466788899999998754211 1 1111  1123455667788888875 46688999999999


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS  253 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (514)
                      ++..++..+.......  .....+|..+..++........... ..   ....  .....  .+                
T Consensus        99 ~~~~~~~~~~~~~~~~--~~~~~vi~~~~~~~~~~~~~~~~~~-~~---~~~~--~~~~~--~~----------------  152 (404)
T d1qz9a_          99 NLFKVLSAALRVQATR--SPERRVIVTETSNFPTDLYIAEGLA-DM---LQQG--YTLRL--VD----------------  152 (404)
T ss_dssp             HHHHHHHHHHHHHHHH--STTCCEEEEETTSCHHHHHHHHHHH-HH---HCSS--CEEEE--ES----------------
T ss_pred             HHHHHhhhhhhhhccc--CCCcEEEEeccccchHHHHHHhhhh-ee---eeec--eeccc--cc----------------
Confidence            9988776543221111  2334566666666543211111000 00   0000  00000  00                


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCC
Q 010250          254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKP  333 (514)
Q Consensus       254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~p  333 (514)
                        ..+++++++.    +++.+|.+..+++.+|.+.|    +++|.++|+++|+++++|-+|+ +|..    ..+.....+
T Consensus       153 --~~~~~~~~i~----~~T~lV~i~~v~~~tG~~~p----v~~i~~~~~~~~~~~~vD~~q~-~g~~----~~~~~~~~~  217 (404)
T d1qz9a_         153 --SPEELPQAID----QDTAVVMLTHVNYKTGYMHD----MQALTALSHECGALAIWDLAHS-AGAV----PVDLHQAGA  217 (404)
T ss_dssp             --SGGGHHHHCS----TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHHTCEEEEECTTT-TTTS----CCCHHHHTC
T ss_pred             --cchhHHHhcC----CCceEEEEecccccccceec----HHHHhccccccccceeEEeecc-cccc----ccccccccc
Confidence              0234444443    57899999999999999998    9999999999999999999997 5432    223333345


Q ss_pred             chhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCc----------c------cccCCCCCcHHHHHHHHHHHHHH
Q 010250          334 DLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGS----------F------SHGFTYSGHPVSCAVAIEALKIY  395 (514)
Q Consensus       334 Div~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~----------~------~~~~t~~~~pl~~aaa~aal~~~  395 (514)
                      |.++++  |.+.+|...+|+++.+++..+.+.......+.          +      ........+..+.....++++.+
T Consensus       218 d~~~~s~~K~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (404)
T d1qz9a_         218 DYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVF  297 (404)
T ss_dssp             SEEEECSSSTTCCCTTCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHH
T ss_pred             eEEEEechhhcccCCceEEEEEechhhhhhCCccccccCCccccccccccccccccchhhhhhhccchhHHHHHHHHHHH
Confidence            766554  87765423356777787765554321110000          0      00011223455666666666666


Q ss_pred             hh---ccHHHHHHHHHHHHHhhhhhccCCC---cee--EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCc
Q 010250          396 KE---RNIVEQVNKIAPKFQDGVKAFSDSP---IIG--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGM  467 (514)
Q Consensus       396 ~~---~~~~~~~~~~~~~l~~~L~~l~~~~---~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv  467 (514)
                      .+   +.+.++...+...+...+..+...+   +++  +....+.++.+.+.+              +..+.+.|.++||
T Consensus       298 ~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~i~~p~~~~~r~~~vsf~~~~--------------~~~v~~~L~~~gi  363 (404)
T d1qz9a_         298 AQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE--------------GYAVIQALIDRGV  363 (404)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT--------------HHHHHHHHHTTTE
T ss_pred             HHhhHHHHHHHHHHhHHHHHHHHHhhccCCCEEEECCCCccceeeEEEEecCC--------------HHHHHHHHHHCCC
Confidence            54   2344555555555555444432222   111  111234455555432              4457888999999


Q ss_pred             EEEee-CCEEEEeC-CCCCCHHHHHHHHHHHHHHHHH
Q 010250          468 LVRVS-GDNIMMSP-PFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       468 ~~~~~-g~~iRi~p-~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      ++... ++.|||+| ++.+|++|||+++++|++++++
T Consensus       364 ~~~~r~~~~lRiS~~h~ynt~~did~~~~~L~~vl~~  400 (404)
T d1qz9a_         364 IGDYREPRIMRFGFTPLYTTFTEVWDAVQILGEILDR  400 (404)
T ss_dssp             ECEEETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred             EEeecCCCeEEEECCCCCCCHHHHHHHHHHHHHHHHh
Confidence            87654 57899999 6789999999999999999864

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.70  E-value=6.4e-16  Score=153.88  Aligned_cols=302  Identities=15%  Similarity=0.214  Sum_probs=179.2

Q ss_pred             chHHHHHHHHHHhcCcC-CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee-cCCCcccc
Q 010250          144 KPSLDLAKELLEMFTAS-KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS-LSGLPALH  221 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~-~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~-~s~~~~~~  221 (514)
                      +...+..++|+++++.. +...++|++|||++++.++....        ..+++++.....+++....... ..+.....
T Consensus        33 ~~~~~~r~~l~~l~~~~~~~~~i~~t~s~T~~~~~~~~~l~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (361)
T d1m32a_          33 GVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSAL--------GPQDKVLIVSNGAYGARMVEMAGLMGIAHHA  104 (361)
T ss_dssp             TTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSC--------CTTCCEEEEESSHHHHHHHHHHHHHTCCEEE
T ss_pred             HHHHHHHHHHHHHhCCCCCCEEEEECCCHHHHHHHHHHHhh--------hhccccceeeehhhhhhHHHHhhhhhccccc
Confidence            55677888888888532 22237788999999999987552        2334555555555543221111 11111000


Q ss_pred             CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH
Q 010250          222 QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV  301 (514)
Q Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~  301 (514)
                                  ...+.      ....        ..+.+....... .++..+.+-.+.+.+|.+.|    +++|.++|
T Consensus       105 ------------~~~~~------~~~~--------~~~~~~~~~~~~-~~~~~v~~~~~~~~tG~~~~----i~~i~~~~  153 (361)
T d1m32a_         105 ------------YDCGE------VARP--------DVQAIDAILNAD-PTISHIAMVHSETTTGMLNP----IDEVGALA  153 (361)
T ss_dssp             ------------EECCT------TSCC--------CHHHHHHHHHHC-TTCCEEEEESEETTTTEECC----HHHHHHHH
T ss_pred             ------------ccccc------cCCc--------cchhhHHHHHhc-cCccceEEEeeecccccchh----hhhhhhhh
Confidence                        00000      0000        012222222222 46778888888888999998    99999999


Q ss_pred             HhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccCCCCc--------
Q 010250          302 KKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSNTLGS--------  371 (514)
Q Consensus       302 ~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~--------  371 (514)
                      ++||+++++|-+|+ +|..    .++......|.+++|  |++.|. ..+|+++.+++..+...+.......        
T Consensus       154 ~~~g~~~~vDa~qs-~G~~----~~d~~~~~~D~~~~s~~K~l~gp-~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (361)
T d1m32a_         154 HRYGKTYIVDAMSS-FGGI----PMDIAALHIDYLISSANKCIQGV-PGFAFVIAREQKLAACKGHSRSLSLDLYAQWRC  227 (361)
T ss_dssp             HHHTCEEEEECTTT-TTTS----CCCTTTTTCSEEEEESSSTTCCC-SSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHH
T ss_pred             cccceeeEeecccc-cCcc----cccccccccceEEeeecccccCC-CCceEEEechhhhhhhccccccccccchhhhcc
Confidence            99999999999998 5433    234444557888877  888875 4688999999887766542211000        


Q ss_pred             ---ccccCCCCCcHHHHHHHHHHHHHHhhcc----HHHHHHHHHHHHHhhhhhcc-CCCceeEEEeeeeeEEEEEccCCC
Q 010250          372 ---FSHGFTYSGHPVSCAVAIEALKIYKERN----IVEQVNKIAPKFQDGVKAFS-DSPIIGEIRGTGLILGTEFADNKS  443 (514)
Q Consensus       372 ---~~~~~t~~~~pl~~aaa~aal~~~~~~~----~~~~~~~~~~~l~~~L~~l~-~~~~~~~v~g~g~~~~i~~~~~~~  443 (514)
                         ......+..+...+.+...+++...++.    ...+.+...+.+++.++.+. ........+. ..+..+.+++...
T Consensus       228 ~~~~~~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~rs-~~v~~~~~p~~~~  306 (361)
T d1m32a_         228 MEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRALGFNTLLDDELHS-PIITAFYSPEDPQ  306 (361)
T ss_dssp             HHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHTTCCBSSCGGGBC-SSEEEEECCCCTT
T ss_pred             ccccccccCCCCCchhhhHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHhhcCCcccCChhhcC-CcEEEEECCCCCC
Confidence               0011123334455566666666555443    23455556666666666552 1111111111 2344565543221


Q ss_pred             CCCCCCCccchHHHHHHHHHHCCcEEEee----CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          444 PNEPFPPEWGIGAYFGAQCEKHGMLVRVS----GDNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       444 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----g~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      .         ....+.+.|.++|+.+..+    ++.+|++..-.++++||++++++|+++|
T Consensus       307 ~---------~~~~~~~~l~~~gi~i~~G~~~~~~~~Ris~~g~~~~~di~~lv~al~~~L  358 (361)
T d1m32a_         307 Y---------RFSEFYRRLKEQGFVIYPGKVSQSDCFRIGNIGEVYAADITALLTAIRTAM  358 (361)
T ss_dssp             C---------CHHHHHHHHHHTTEECEECCCSSSCEEEEECCSSCCHHHHHHHHHHHHHHC
T ss_pred             C---------CHHHHHHHHHHCCcEEECCCcCCCCEEEEeCCCCCCHHHHHHHHHHHHHHc
Confidence            1         1456888999999998754    3569999543679999999999999875

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=99.68  E-value=1.8e-16  Score=161.22  Aligned_cols=353  Identities=9%  Similarity=0.044  Sum_probs=187.7

Q ss_pred             EEccCCcccccCCC--CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-------CCCCeEEEeCChhH
Q 010250          103 LDSLAGLWCTALGG--SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-------SKMAKVFFTNSGSE  173 (514)
Q Consensus       103 lD~~s~~~~~~lGh--~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-------~~~~~v~~~~sGse  173 (514)
                      ||+.-|...+.-|.  ..|.|.+|....+..-...+.  ..+.....+|.+.+++++..       .+...+..+.+++.
T Consensus        33 Inl~iG~~~d~~g~~~~~~~V~~a~~~~~~~~~~~~~--Y~p~~G~p~lreaia~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (412)
T d1ajsa_          33 VNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHE--YLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTG  110 (412)
T ss_dssp             EECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCC--CCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHH
T ss_pred             EEeeCCCCcCCCCCCCCcHHHHHHHHHHHhCCCcCCC--CCCCCCCHHHHHHHHHHHhccCCcccccccceeecccchhh
Confidence            56655533333443  246677775554443221111  11333345666666665421       12223556778888


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS  253 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (514)
                      ++..+..++........ ..++.|++.+++|.++.......++.+....            ++++.      ..    + 
T Consensus       111 ~~~~~~~~l~~~~~~~~-~pGd~Vlv~~P~y~~y~~~~~~~G~~~v~~~------------~~~~~------~~----~-  166 (412)
T d1ajsa_         111 ALRIGAEFLARWYNGTN-NKDTPVYVSSPTWENHNGVFTTAGFKDIRSY------------RYWDT------EK----R-  166 (412)
T ss_dssp             HHHHHHHHHHHHSSSSS-CCCSCEEEEESCCTHHHHHHHHTTCSCEEEE------------ECEET------TT----T-
T ss_pred             HHHHHHHHHHHHhhhcC-CCCCEEEEeCCcchhhHHHHHHcCCeEEEee------------ccccc------cc----c-
Confidence            88888776543322223 3357899999999877544444333221100            00000      00    0 


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCccccccc---cee-ccc
Q 010250          254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTM---FGC-DKY  329 (514)
Q Consensus       254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~---~~~-~~~  329 (514)
                      ..+.+.+++.+....+ ...++++.+.+|.+|. +.+++.+++|.++|++||+++|+||+|.++...+..   +.. ...
T Consensus       167 ~~d~~~~~~~~~~~~~-~~~~il~~~P~NPTG~-v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~  244 (412)
T d1ajsa_         167 GLDLQGFLSDLENAPE-FSIFVLHACAHNPTGT-DPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFV  244 (412)
T ss_dssp             EECHHHHHHHHHHSCT-TCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHH
T ss_pred             cccHHHHHHHHHhccC-CcEEEEecCCCCCcCC-CCCHHHHHHHHHHHhhCCEEEEecHhhhhhhcCCcccchhhhhhhh
Confidence            0012444444444443 4455666555666664 457899999999999999999999999988655421   111 111


Q ss_pred             CCC-Cch--hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCC-CCcHHHHHHHHHHHH------HHhh--
Q 010250          330 SIK-PDL--VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY-SGHPVSCAVAIEALK------IYKE--  397 (514)
Q Consensus       330 gv~-pDi--v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~-~~~pl~~aaa~aal~------~~~~--  397 (514)
                      ... ..+  .++||.++..++++|++++..+..+.+......... ...+++ ..+.+++.++.+.+.      ...+  
T Consensus       245 ~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  323 (412)
T d1ajsa_         245 SEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQK-IVRVTWSNPPAQGARIVARTLSDPELFHEWTGNV  323 (412)
T ss_dssp             HTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHH-HHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred             hhcccccccccccccccCCCCCccccccchhHHHHHHHHHHHHHH-HhhccccccchHHHHHHHHHhcCHHHHHHHHHHH
Confidence            111 122  257897776559999999875544333210000000 111222 333444444444332      1111  


Q ss_pred             ccHHHHHHHHHHHHHhhhhhccCCCceeEEE-eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeCCEE
Q 010250          398 RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIR-GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSGDNI  476 (514)
Q Consensus       398 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~-g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~i  476 (514)
                      +.+.++++++++.+.+.|+++........+. ..|.+..+.+.               .+.+.+.+.++||++.+++   
T Consensus       324 ~~~~~~l~~~r~~l~~~L~~~~~~~~~~~i~~~~G~F~~~~ls---------------~~~v~~L~~e~gV~~vpg~---  385 (412)
T d1ajsa_         324 KTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLN---------------PKQVEYLINQKHIYLLPSG---  385 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCSSCCHHHHHCCSSEEECCCC---------------HHHHHHHHHTTCEECCTTS---
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCCeeeecCCCeEEEecCCC---------------HHHHHHHHHhCCEEEeCCC---
Confidence            2345667777788888887762111111111 23433322211               1223344467899888765   


Q ss_pred             EEeCCCCCCHHHHHHHHHHHHHHHHHH
Q 010250          477 MMSPPFIMSPEEVDELISKYGKALKAT  503 (514)
Q Consensus       477 Ri~p~~~~t~e~id~~~~~l~~~l~~~  503 (514)
                      ||+.. ..++++|+.++++|+++++++
T Consensus       386 Ri~~a-g~~~~~i~~~a~aI~~av~~~  411 (412)
T d1ajsa_         386 RINMC-GLTTKNLDYVATSIHEAVTKI  411 (412)
T ss_dssp             EEEGG-GCCTTTHHHHHHHHHHHHHHC
T ss_pred             eEEec-cCCHHHHHHHHHHHHHHHHhc
Confidence            88832 368899999999999999875

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.68  E-value=1.7e-15  Score=151.77  Aligned_cols=336  Identities=18%  Similarity=0.150  Sum_probs=189.9

Q ss_pred             CEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCcc-ccccc---cCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHH
Q 010250          100 KKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFY-HSFWN---RTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEAN  175 (514)
Q Consensus       100 ~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~-~~~~~---~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~  175 (514)
                      |-|||..++      +.-++.|++++.+.++..... ++.+.   ...+...+..++++++++ .+.++|+|++++|+++
T Consensus         2 ~iyld~a~~------~~~p~~v~ea~~~~~~~~~~np~~~~~~~~~~~~~~~~aR~~ia~l~~-~~~~~i~~~~~~T~~l   74 (376)
T d1eg5a_           2 RVYFDNNAT------TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLG-VSPSEIFFTSCATESI   74 (376)
T ss_dssp             CEECBTTTC------CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHT-SCGGGEEEESCHHHHH
T ss_pred             EEEEECccc------ccCCHHHHHHHHHHHHHcCCCCccccHHHHHHHHHHHHHHHHHHHHcC-CCCCcEEEECCHHHHH
Confidence            568887543      456889999999988753211 11000   012223344567888885 4668999999999999


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee---cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS---LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY  252 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~---~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (514)
                      ..++......    . ..++.+++....+|+.......   ..|...            ..++.....+           
T Consensus        75 ~~~~~~~~~~----~-~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~v------------~~vp~~~~~~-----------  126 (376)
T d1eg5a_          75 NWILKTVAET----F-EKRKRTIITTPIEHKAVLETMKYLSMKGFKV------------KYVPVDSRGV-----------  126 (376)
T ss_dssp             HHHHHHHHHH----T-TTTCCEEEECTTSCHHHHHHHHHHHHTTCEE------------EECCBCTTSC-----------
T ss_pred             Hhhhhccccc----c-cccCcccccccccchhhHHHHHHHHhcCCEE------------EEEcCCCCCe-----------
Confidence            9988754221    1 2234455555555554322221   112111            1111111101           


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhc--CCEEEEechhcCcccccccceecccC
Q 010250          253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKY--DILFIADEVICAFGRLGTMFGCDKYS  330 (514)
Q Consensus       253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~--gillI~DEv~tG~gr~G~~~~~~~~g  330 (514)
                        .+++++++++.    +++++|++..+++.+|.+.+    ++++.++|+++  |+++++|.+|. +|..    ..+...
T Consensus       127 --id~~~l~~~i~----~~t~lv~is~v~~~tG~~~~----~~~i~~~~~~~~~~~~~~vD~~q~-~g~~----~~d~~~  191 (376)
T d1eg5a_         127 --VKLEELEKLVD----EDTFLVSIMAANNEVGTIQP----VEDVTRIVKKKNKETLVHVDAVQT-IGKI----PFSLEK  191 (376)
T ss_dssp             --BCHHHHHHHCC----TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHHCTTCEEEEECTTT-TTTS----CCCCTT
T ss_pred             --ECHHHHHHhcC----CCceEEEEECCccccceeee----ehhhhhhhhhcccCceeEEEeeec-cccc----cccccc
Confidence              11466666663    57899999999999999988    89999998666  99999999997 5443    233334


Q ss_pred             CCCchhch--hhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHH
Q 010250          331 IKPDLVSF--AKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNK  406 (514)
Q Consensus       331 v~pDiv~~--sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~  406 (514)
                      ..+|++++  .|.++.  ...|+++.+++.  .+.+.-...+..........+..+...+.+..+....  .........
T Consensus       192 ~~~D~~~~s~~K~~gp--~G~~~l~~~~~~--~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (376)
T d1eg5a_         192 LEVDYASFSAHKFHGP--KGVGITYIRKGV--PIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEK  267 (376)
T ss_dssp             TCCSEEEEEGGGGTSC--TTCEEEEECTTS--CCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             cCccceecccceeecC--CCceeEEeccCc--ccCCcccCCCCcccccCCcccchhhhhHHHHhhccccchhhhhhhhhh
Confidence            45787754  598643  456777777653  1221100000000011112233444444444443322  234455556


Q ss_pred             HHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee--------------
Q 010250          407 IAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS--------------  472 (514)
Q Consensus       407 ~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~--------------  472 (514)
                      ...++.++|......-.............+.+...            .+..+...|.++||.++.+              
T Consensus       268 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~L~~~gI~vr~G~~c~~~~~~~~~~l  335 (376)
T d1eg5a_         268 LRSKLVSGLMNLGAHIITPLEISLPNTLSVSFPNI------------RGSTLQNLLSGYGIYVSTSSACTSKDERLRHVL  335 (376)
T ss_dssp             HHHHHHHHHHTTTCEECSCTTSBCTTEEEEECTTC------------CHHHHHHHHHHTTEECBC------------CHH
T ss_pred             hhhhhccccccccccccccccccccceeeeccCCC------------CHHHHHHHHhhCCeEEeCcchhcCCccchhHHH
Confidence            66677777765411000000000111223333221            1456777888899877532              


Q ss_pred             ----------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          473 ----------GDNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       473 ----------g~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                                ++.||++|....|+||||++++.|++.++
T Consensus       336 ~~~gi~~~~~~~~iRiS~~~ynt~edid~l~~~L~~iv~  374 (376)
T d1eg5a_         336 DAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILS  374 (376)
T ss_dssp             HHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred             HHcCCCcccCCCEEEEecCCCCCHHHHHHHHHHHHHHHh
Confidence                      13599999999999999999999999876

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.68  E-value=1e-15  Score=153.23  Aligned_cols=322  Identities=14%  Similarity=0.118  Sum_probs=185.8

Q ss_pred             CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEE
Q 010250          118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF  197 (514)
Q Consensus       118 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~i  197 (514)
                      +|+|++|+..    ....|.. ....+...+..+.|+++++..+...++|+.|||++++.++....        ..++++
T Consensus        30 ~~~Vl~am~~----~~~~hr~-~ef~~i~~~~r~~l~~ll~~~~~~~i~~~g~gT~~~~~~~~~~~--------~~~~~~   96 (377)
T d1vjoa_          30 HPSVLQAMNV----SPVGHLD-PAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAV--------EPGDVV   96 (377)
T ss_dssp             CHHHHHHHSS----CCCCTTS-HHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHC--------CTTCEE
T ss_pred             CHHHHHHhCc----CCCCCCC-HHHHHHHHHHHHHHHHHhCCCCCeEEEEcCcHHHHHHHHHHhcc--------cccccc
Confidence            6777776532    2222211 11235667788888888864455678888999999999987663        345677


Q ss_pred             EEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEE
Q 010250          198 IARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIA  277 (514)
Q Consensus       198 i~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aaviv  277 (514)
                      +.....+++...............           ....+..     ....        .++.+.....   .++..+.+
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~-----~~~~--------~~~~~~~~~~---~~~~~v~~  149 (377)
T d1vjoa_          97 LIGVAGYFGNRLVDMAGRYGADVR-----------TISKPWG-----EVFS--------LEELRTALET---HRPAILAL  149 (377)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEEE-----------EEECCTT-----CCCC--------HHHHHHHHHH---HCCSEEEE
T ss_pred             ceeeechhhhhhhhhhhhhccccc-----------ccccCCC-----Cccc--------chhhhhhhhc---Ccceeeee
Confidence            777766665432222111100000           0000000     0000        1222222222   23445666


Q ss_pred             ccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEEeC
Q 010250          278 EPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILVS  355 (514)
Q Consensus       278 Epv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~~  355 (514)
                      ..+.+.+|.+.|    +++|.++|+++|+++++|.+|+ +|..    .++......|.++++  |+++|+ ..+|+++.+
T Consensus       150 ~~~~~~tg~~~~----i~~i~~~~~~~g~~~~vDa~~~-~g~~----~~~~~~~~~d~~~~s~~K~~~gp-~g~~~~~~~  219 (377)
T d1vjoa_         150 VHAETSTGARQP----LEGVGELCREFGTLLLVDTVTS-LGGV----PIFLDAWGVDLAYSCSQKGLGCS-PGASPFTMS  219 (377)
T ss_dssp             ESEETTTTEECC----CTTHHHHHHHHTCEEEEECTTT-TTTS----CCCTTTTTCSEEECCSSSTTCSC-SSCEEEEEC
T ss_pred             eeeeccceeeec----hhhhhhhhhhccceEEEecchh-hhhh----hhcccccccceeeecccccccCC-CEEEEecch
Confidence            677888899988    8999999999999999999997 5433    233344456777665  677775 456778889


Q ss_pred             HHHHHHhhhccCCCCcc------------cccCCC-CCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhcc
Q 010250          356 PEVSEVIHSQSNTLGSF------------SHGFTY-SGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFS  419 (514)
Q Consensus       356 ~~i~~~l~~~~~~~~~~------------~~~~t~-~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~  419 (514)
                      +..++...........+            ....+. ..+...+.+..++.+.+.+   +...++.+++..++.+.+... 
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~~l~~~-  298 (377)
T d1vjoa_         220 SRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-  298 (377)
T ss_dssp             HHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             hhHHhhhhccCCCCcceeeccchhhhccCcccccccccceechhhhHHHHhhhhhcCchHHHHHHHHHhhhhhhhhhcc-
Confidence            98887766432211100            001111 2222333444455555444   334566777777788887664 


Q ss_pred             CCCcee-EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEee-----CCEEEEeC-CCCCCHHHHHH
Q 010250          420 DSPIIG-EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVS-----GDNIMMSP-PFIMSPEEVDE  491 (514)
Q Consensus       420 ~~~~~~-~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~-----g~~iRi~p-~~~~t~e~id~  491 (514)
                      ....+. .-.....+..+.+++..           ....+...|. +.||.+..+     ++.||+++ ....|+||||+
T Consensus       299 ~~~~~~~~~~rs~~v~~~~~p~~~-----------~~~~l~~~L~~~~gI~v~~G~~~~~~~~~Ris~~g~~~t~edi~~  367 (377)
T d1vjoa_         299 GLSLHVEKEYRLPTLTTVCIPDGV-----------DGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQ  367 (377)
T ss_dssp             TCCBSSCGGGBCSSEEEEECCTTC-----------CHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHH
T ss_pred             CceeecChHhcCCeEEEEECCCCC-----------CHHHHHHHHHhcCCEEEecCcccccCCEEEEecCcCCCCHHHHHH
Confidence            111111 11112334455554321           1455777765 559988642     46799995 46678999999


Q ss_pred             HHHHHHHHHH
Q 010250          492 LISKYGKALK  501 (514)
Q Consensus       492 ~~~~l~~~l~  501 (514)
                      ++++|+++|+
T Consensus       368 lv~al~~~l~  377 (377)
T d1vjoa_         368 LIPALEQVLR  377 (377)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHhC
Confidence            9999998873

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.67  E-value=1.4e-15  Score=156.00  Aligned_cols=311  Identities=13%  Similarity=0.074  Sum_probs=183.6

Q ss_pred             HHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCC
Q 010250          147 LDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDL  226 (514)
Q Consensus       147 ~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~  226 (514)
                      .++.+.++++++.......+++++|+++...++.+++...   . ++++.|| .+..-|.+...++...|.....     
T Consensus        97 ~~~~~~~~~l~g~~~~~~~~~~~~~t~~~~~~~l~a~~~~---~-~~~~~vi-~~~~~H~s~~~a~~~~g~~~~~-----  166 (445)
T d3bc8a1          97 NSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHK---R-PKAKYII-WPRIDQKSCFKSMVTAGFEPVV-----  166 (445)
T ss_dssp             HHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHH---C-TTCCEEE-EECCCCHHHHHHHHHTTCEEEE-----
T ss_pred             HHHHHHHHHHhCCCcccCccccccchHHHHHHHHHHHHHh---C-CCCCEEE-EcCcccHHHHHHHHHcCCeeEE-----
Confidence            3456677777754445678899999987777766665332   1 3334454 4566688776666655543211     


Q ss_pred             CCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCC
Q 010250          227 PAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDI  306 (514)
Q Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gi  306 (514)
                          +...+..+.+             ..++++|++.+.+...+++++|++...+...|.+.|    +++|.++|++||+
T Consensus       167 ----v~~~~~~~~~-------------~id~~~l~~~i~~~~~~~~~~v~~~~~~~~~G~~~~----~~~i~~~~~~~~~  225 (445)
T d3bc8a1         167 ----IENVLEGDEL-------------RTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR----LEELAVICANYDI  225 (445)
T ss_dssp             ----ECCEEETTEE-------------ECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC----HHHHHHHHHHHTC
T ss_pred             ----EEeeccCccc-------------ccCHHHHHHHHHhccccCeEEEEEeCCCCCCeeehh----HHHHHHHHHHhCC
Confidence                0000111111             122688999998776667899999888888898877    9999999999999


Q ss_pred             EEEEechhcCccc-ccc--cceecccCCCCchhchh--hhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCC
Q 010250          307 LFIADEVICAFGR-LGT--MFGCDKYSIKPDLVSFA--KALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSG  380 (514)
Q Consensus       307 llI~DEv~tG~gr-~G~--~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~  380 (514)
                      +||+|+++.++-. ..+  .+.....  ..|+++++  |.++++ ...|+++.+ +.+.+.+...       ..+.....
T Consensus       226 ~l~vD~a~~~~~~~~~~~~~~~~~~~--~vd~~~~s~hK~~~~p-~g~~~l~~~~~~~~~~~~~~-------~~~~~~~~  295 (445)
T d3bc8a1         226 PHVVNNAYGLQSSKCMHLIQQGARVG--RIDAFVQSLDKNFMVP-VGGAIIAGFNEPFIQDISKM-------YPGRASAS  295 (445)
T ss_dssp             CEEEECTTTTTCHHHHHHHHHHHHHS--CCCEEEEEHHHHHSCC-SSCEEEEESCHHHHHHHHHH-------SCSCBCSH
T ss_pred             cEEEEccchhhhhhccccchhccCcC--CcceEEecCccccccC-CCCceeeeCChHHHHHHHHH-------HhhcccCc
Confidence            9999999974311 111  1111111  25776654  888876 455666665 4556655421       11122222


Q ss_pred             cHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhcc-CCC-ceeEEEeeeeeEEEEEccCCCCCCCCCCccchH
Q 010250          381 HPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFS-DSP-IIGEIRGTGLILGTEFADNKSPNEPFPPEWGIG  455 (514)
Q Consensus       381 ~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~-~~~-~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~  455 (514)
                      ..+.+   .+++..+..   ....++..++.+++++.|.++. ..+ .+...........+.+.......      ....
T Consensus       296 ~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~~l~~~~~~~~~~~~l~~~~~~~------~~~~  366 (445)
T d3bc8a1         296 PSLDV---LITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHH------DKAV  366 (445)
T ss_dssp             HHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSS------SCHH
T ss_pred             chHHH---HHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHHhhcCceeecCCCCCcceEEEeeeccccC------CCCH
Confidence            22333   333333332   3445566667777888887652 121 11122222333334443221110      1123


Q ss_pred             HHHHHHHHHCCcEEEe-------------------------eCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250          456 AYFGAQCEKHGMLVRV-------------------------SGDNIMMSPPFIMSPEEVDELISKYGKALKATEERV  507 (514)
Q Consensus       456 ~~~~~~l~~~Gv~~~~-------------------------~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~~~  507 (514)
                      ..+...|.+.||-...                         ..+.||++++..+|+||||.+++.|++++++++++.
T Consensus       367 ~~l~~~L~~~gI~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~i~i~~~~~~T~eDID~~v~~L~kilk~~rk~~  443 (445)
T d3bc8a1         367 TQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKEQ  443 (445)
T ss_dssp             HHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCcceeeccccccchhhhhhhhcCCCCccCCCCeEEEeCcCCCCHHHHHHHHHHHHHHHHHHHhhh
Confidence            4567778888763210                         013489999999999999999999999999887653

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.67  E-value=2.9e-17  Score=164.45  Aligned_cols=210  Identities=17%  Similarity=0.040  Sum_probs=128.9

Q ss_pred             CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEE
Q 010250          118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF  197 (514)
Q Consensus       118 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~i  197 (514)
                      ++.+.++..+.++....       +.....++.+...+.+.....+.++.++||++|+.+++...         .+++.+
T Consensus        31 ~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~a~~~~l~al---------~~~~~v   94 (366)
T d2aeua1          31 GFLIDEKDKALLNTYIG-------SSYFAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL---------KPKKVI   94 (366)
T ss_dssp             CCCCCHHHHHHHTSTTH-------HHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH---------CCSEEE
T ss_pred             CCCccHHHHHHHHHhcC-------chhhHHHHHHHHHHHccCCCccEEEEeCCHHHHHHHHHHHh---------CCCCEE
Confidence            34455555555554321       22234566666677776556678999999999999999654         345566


Q ss_pred             EEE-ecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 010250          198 IAR-QKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFI  276 (514)
Q Consensus       198 i~~-~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavi  276 (514)
                      |+. +...|.+...++.+.+....              +.                  .++++|++.+.    +++.+|+
T Consensus        95 i~~~~~~~~~~~~~~~~l~g~~~v--------------~~------------------~d~e~l~~~i~----~~tk~i~  138 (366)
T d2aeua1          95 HYLPELPGHPSIERSCKIVNAKYF--------------ES------------------DKVGEILNKID----KDTLVII  138 (366)
T ss_dssp             EECSSSSCCTHHHHHHHHTTCEEE--------------EE------------------SCHHHHHTTCC----TTEEEEE
T ss_pred             EEecCCCcchhHHHHHHhcCCeEE--------------CC------------------CCHHHHHHhcC----CCceEEE
Confidence            655 33456655444444443110              00                  01355555443    4566666


Q ss_pred             Ecc-ccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc--eecccCCCCchhc--hhhhhcCCccccee
Q 010250          277 AEP-VIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF--GCDKYSIKPDLVS--FAKALSSAYMPIGA  351 (514)
Q Consensus       277 vEp-v~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~--~~~~~gv~pDiv~--~sK~l~gG~~pig~  351 (514)
                      ++. .+++++.+.    -|++|.++|++||+++|+||+|... ..+..+  ....++  .|+++  ++|+++|  +++|+
T Consensus       139 ~~~p~n~~~~~~~----~l~~i~~ia~~~~~~~i~De~y~~~-~~~~~~~~~~~~~~--~di~~~S~sK~~~g--~~~G~  209 (366)
T d2aeua1         139 TGSTMDLKVIELE----NFKKVINTAKNKEAIVFVDDASGAR-VRLLFNQPPALKLG--ADLVVTSTDKLMEG--PRGGL  209 (366)
T ss_dssp             ECBCTTSCBCCHH----HHHHHHHHHHHHTCCEEEECTTHHH-HHHHTTCCCHHHHT--CSEEEEETTSSSSS--CSCEE
T ss_pred             EEecCCCCcCCHH----HHHHHHHHhccCcEEEEEecCcccc-ccccccCCCHhhcC--ceEEEecccccccc--cceeE
Confidence            664 455444443    3999999999999999999998622 211111  111233  46664  5577775  88999


Q ss_pred             EEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHH
Q 010250          352 ILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIY  395 (514)
Q Consensus       352 v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~  395 (514)
                      +++++++++.+...       ....++..+|..+.++.++|+.+
T Consensus       210 i~~~~~~i~~~~~~-------~~~~g~~~~~~~~~a~~~aL~tl  246 (366)
T d2aeua1         210 LAGKKELVDKIYIE-------GTKFGLEAQPPLLAGIYRALKNF  246 (366)
T ss_dssp             EEEEHHHHHHHHHH-------HHTTTCBCCHHHHHHHHHHHHHC
T ss_pred             EEecHHHHHHHHHH-------HhcccccCCHHHHHHHHHHHHhc
Confidence            99999999988742       22234556777777777777643

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=99.64  E-value=4e-16  Score=158.07  Aligned_cols=347  Identities=12%  Similarity=-0.012  Sum_probs=179.7

Q ss_pred             EEccCCcccccCCC--CCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcCc-CCCCeEEEeCC--hhHHHH
Q 010250          103 LDSLAGLWCTALGG--SEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFTA-SKMAKVFFTNS--GSEAND  176 (514)
Q Consensus       103 lD~~s~~~~~~lGh--~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~~-~~~~~v~~~~s--GseA~~  176 (514)
                      ||+..|.+-..-|.  ..|.|.+|..+.+++.. +.+....+..+....+++++...... ...+.++.+.+  |+.+..
T Consensus        31 InL~iG~~~d~~~~~~~~~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~~~~~~g~~~  110 (401)
T d7aata_          31 MNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLR  110 (401)
T ss_dssp             EECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHH
T ss_pred             EEccCCCCcCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhccCCcccCcCceEEeccchHHHHHH
Confidence            77766643334443  24778888777765532 22221122333444444444333211 12345544432  333333


Q ss_pred             HHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHH
Q 010250          177 TQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRL  256 (514)
Q Consensus       177 ~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (514)
                      +...+++..    . ...+.|++.+++|+++.......+...... ...          ..+.|.             .+
T Consensus       111 ~~~~~~~~l----~-~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~-~~~----------~~~~~~-------------~~  161 (401)
T d7aata_         111 VGANFLQRF----F-KFSRDVYLPKPSWGNHTPIFRDAGLQLQAY-RYY----------DPKTCS-------------LD  161 (401)
T ss_dssp             HHHHHHHHH----C-TTCCEEEEEESCCTTHHHHHHHTTCEEEEE-ECE----------ETTTTE-------------EC
T ss_pred             HHHHhhHhh----c-CCCceEEEecCCCcchhhHHHHcCCeEEEE-ecc----------cccccc-------------cc
Confidence            332222222    1 335789999999999865544433322110 000          000000             01


Q ss_pred             HHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc----eecccCCC
Q 010250          257 ANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF----GCDKYSIK  332 (514)
Q Consensus       257 ~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~----~~~~~gv~  332 (514)
                      .+.+++.+....+ ++.++++...+|.+|.+ .+.+.+++|.++|++||+++|.||+|.++...+...    ........
T Consensus       162 ~~~~~~~~~~~~~-~~~~iii~~p~NPTG~~-~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~  239 (401)
T d7aata_         162 FTGAMEDISKIPE-KSIILLHACAHNPTGVD-PRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQG  239 (401)
T ss_dssp             HHHHHHHHTTSCT-TCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTT
T ss_pred             HHHHHHHHhcCCC-ceEEEEecCCCCCcccc-CCHHHHHHHHHHHhcceEEEEEeccchhhhcCCcccchhhhhhhhhhh
Confidence            3455555544433 44555555556666654 477999999999999999999999999886554211    11111222


Q ss_pred             Cch---hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHH--HH----hh--ccHH
Q 010250          333 PDL---VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALK--IY----KE--RNIV  401 (514)
Q Consensus       333 pDi---v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~--~~----~~--~~~~  401 (514)
                      +.+   .++||.++-.++++|++++..++.+..................+.+.+.++++...++  .+    .+  +...
T Consensus       240 ~~~~~~~s~sk~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~  319 (401)
T d7aata_         240 IDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMA  319 (401)
T ss_dssp             CCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             cccceeEeccccceeeccccceeecchHHHHHHHHHHHHHHHHhhccccccchHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence            233   3678976654499999999877655443210000000011112233344444433332  11    11  2345


Q ss_pred             HHHHHHHHHHHhhhhhcc-CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEeeCCEEEEe
Q 010250          402 EQVNKIAPKFQDGVKAFS-DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVSGDNIMMS  479 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l~-~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g~~iRi~  479 (514)
                      ++++++++.+.+.|+++. ...+.......|.+.++.+.               . .++++| .++||.+.++   +||+
T Consensus       320 ~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls---------------~-e~~~~L~~e~gV~~~pg---~Ris  380 (401)
T d7aata_         320 DRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLK---------------P-EQVERLTKEFSIYMTKD---GRIS  380 (401)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCC---------------H-HHHHHHHHHHCEECCTT---CEEE
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCcceECCCCeEEEecCCC---------------H-HHHHHHHHhCCEEECCC---cEEE
Confidence            667777778888887752 11111011223444443221               1 234444 6689988765   4888


Q ss_pred             CCCCCCHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l  500 (514)
                      .. ..++++|+.+.++|.+++
T Consensus       381 ~a-~~~~~~i~~la~ai~~v~  400 (401)
T d7aata_         381 VA-GVASSNVGYLAHAIHQVT  400 (401)
T ss_dssp             GG-GCCTTTHHHHHHHHHHHH
T ss_pred             ec-cCCHHHHHHHHHHHHHHh
Confidence            32 378889999999888875

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=8.1e-16  Score=155.48  Aligned_cols=341  Identities=13%  Similarity=0.099  Sum_probs=183.0

Q ss_pred             EEccCCcccccCCC--CCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhc----Cc---CCCCeEEEeCChh
Q 010250          103 LDSLAGLWCTALGG--SEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMF----TA---SKMAKVFFTNSGS  172 (514)
Q Consensus       103 lD~~s~~~~~~lGh--~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~----~~---~~~~~v~~~~sGs  172 (514)
                      ||+..|....+-|.  -.|.|++|..+.+++.. +.+.    +.....+|.+.+++++    ..   ........+.+|+
T Consensus        29 InL~iG~~~d~~g~~p~~~~V~~A~~~~~~~~~~~~Y~----p~~G~~~lR~aia~~~~~~~~~~~~~~~~~~~~~~~~~  104 (396)
T d2q7wa1          29 INLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYL----GIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGT  104 (396)
T ss_dssp             EESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCC----CTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHH
T ss_pred             EEeeCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCC----CCcCCHHHHHHHHHHHHhhcCCcccccceeeeccchHH
Confidence            79887755555664  34889999888776532 2111    2223345555555443    11   1112334566666


Q ss_pred             HHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHH
Q 010250          173 EANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEY  252 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (514)
                      .+...++.+....      ...+.|++.+++|.++.......+..........           +..+.        .  
T Consensus       105 ~~~~l~~~~l~~~------~~gd~Vlvp~P~y~~y~~~~~~~g~~~~~~~~~~-----------~~~~~--------~--  157 (396)
T d2q7wa1         105 GALRVAADFLAKN------TSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYD-----------AENHT--------L--  157 (396)
T ss_dssp             HHHHHHHHHHHHH------SCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEE-----------TTTTE--------E--
T ss_pred             HHHHHHHHHHhhc------ccceEEEEecCCCccchHHHHHcCCeeEeccccc-----------ccccc--------c--
Confidence            6665555433211      3457899999999988655554443322110000           00000        0  


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce--ec-cc
Q 010250          253 STRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG--CD-KY  329 (514)
Q Consensus       253 ~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~--~~-~~  329 (514)
                         +..+++....+..+ ++.++++...+|.+|.+ .+++.+++|.++|++|++++|+||+|.++...+....  .. ..
T Consensus       158 ---~~~~~~~~~~~~~~-~~~~i~~~~P~NPTG~~-~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~  232 (396)
T d2q7wa1         158 ---DFDALINSLNEAQA-GDVVLFHGCCHNPTGID-PTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFA  232 (396)
T ss_dssp             ---CHHHHHHHHTTCCT-TCEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHH
T ss_pred             ---ccchHHHHHHHhcc-CcEEEEecCCcCCcCee-cCHHHHHHHHHHHhcCCeEEEEeccccccccCCccCchHhhhhh
Confidence               02444444444443 34455555555566644 5679999999999999999999999998855443111  11 11


Q ss_pred             CCCCc---hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCc-HHHHHHHHHHHH------HHhh--
Q 010250          330 SIKPD---LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGH-PVSCAVAIEALK------IYKE--  397 (514)
Q Consensus       330 gv~pD---iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~-pl~~aaa~aal~------~~~~--  397 (514)
                      +..++   +..++|.++..++++|++++.++.++......... .....+++... ..++.++.+.+.      ..++  
T Consensus       233 ~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~  311 (396)
T d2q7wa1         233 AMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQM-KAAIRANYSNPPAHGASVVATILSNDALRAIWEQEL  311 (396)
T ss_dssp             HHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHH-HHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred             hhcccccccccccccccccCCCccccccchhHHHHHHHhhhhh-hhhhhccccCCCHHHHHHHHHHhcCchhHHHHHHHH
Confidence            11222   23578976654499999999876555443210000 00112233333 333333333321      1111  


Q ss_pred             ccHHHHHHHHHHHHHhhhhhcc-CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEeeCCE
Q 010250          398 RNIVEQVNKIAPKFQDGVKAFS-DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVSGDN  475 (514)
Q Consensus       398 ~~~~~~~~~~~~~l~~~L~~l~-~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g~~  475 (514)
                      +...++++++++.+.+.|+++. ...+..-....|.+.++.+.               . .++++| .+.||++.+++  
T Consensus       312 ~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~l~---------------~-e~~~~L~~e~gV~~~~g~--  373 (396)
T d2q7wa1         312 TDMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLT---------------K-EQVLRLREEFGVYAVASG--  373 (396)
T ss_dssp             HHC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCC---------------H-HHHHHHHHHHCEECCTTC--
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCCcceecCCCeEEEeeCCC---------------H-HHHHHHHHhCCEEECCCC--
Confidence            2345677778888888887762 11110011223555443321               1 234555 46799887765  


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                       ||+.. .+++++|+.++++|.+++
T Consensus       374 -Ri~~a-~l~~~~i~~~~~ai~~v~  396 (396)
T d2q7wa1         374 -RVNVA-GMTPDNMAPLCEAIVAVL  396 (396)
T ss_dssp             -EEEGG-GCCTTTHHHHHHHHHHHC
T ss_pred             -EEEec-CCCHHHHHHHHHHHHHhC
Confidence             88732 468889999999888763

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.62  E-value=1.2e-14  Score=146.15  Aligned_cols=324  Identities=14%  Similarity=0.105  Sum_probs=187.1

Q ss_pred             CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEE
Q 010250          118 EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKF  197 (514)
Q Consensus       118 ~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~i  197 (514)
                      +|+|++|+.+..    ..|+. ....+...+..+.|++++...+.+.++|+.|||+|+++++..+.        .+++++
T Consensus        29 ~~~V~~Am~~~~----~~hr~-~ef~~i~~~~r~~L~~ll~~~~~~~i~~~gsgT~a~ea~~~~l~--------~~~~~v   95 (388)
T d2ch1a1          29 SKRVLTAMTNTV----LSNFH-AELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLL--------EEGDRV   95 (388)
T ss_dssp             CHHHHHHTTSCC----CCTTC-HHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHC--------CTTCEE
T ss_pred             CHHHHHHhCcCC----CCCCC-HHHHHHHHHHHHHHHHHhCCCCCeEEEEcCcHHHHHHHHHHHhc--------cccccc
Confidence            788887763221    11211 11235667788888888865455567778899999999998774        345667


Q ss_pred             EEEecCCcccceeeeec-CCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEE
Q 010250          198 IARQKSYHGSTLIAASL-SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFI  276 (514)
Q Consensus       198 i~~~~~yHG~t~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavi  276 (514)
                      ++...+.++........ -+...            ..+..++.       ...+      .++.+..+...   ++..+.
T Consensus        96 l~~~~g~~~~~~~~~~~~~~~~~------------~~~~~~~~-------~~~~------~~~~~~~~~~~---~~~~v~  147 (388)
T d2ch1a1          96 LIAVNGIWAERAVEMSERYGADV------------RTIEGPPD-------RPFS------LETLARAIELH---QPKCLF  147 (388)
T ss_dssp             EEEESSHHHHHHHHHHHHTTCEE------------EEEECCTT-------SCCC------HHHHHHHHHHH---CCSEEE
T ss_pred             cccccccccccchhhhhhhcccc------------cccccccc-------cccc------hhhhhhhhccC---Ccceee
Confidence            77766665542221110 01000            00111100       0000      13333433332   345666


Q ss_pred             EccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEEe
Q 010250          277 AEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILV  354 (514)
Q Consensus       277 vEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~  354 (514)
                      +-.+.+.+|.+.|    ++++.++|+++|+++++|-+++ +|..    .++..+...|.+++|  |+++|. ..+|.++.
T Consensus       148 ~~~~~t~tG~~~~----~~~i~~~~~~~~~~~~vD~~ss-~g~~----pid~~~~~~d~~~~s~~K~~~gp-~G~g~~~~  217 (388)
T d2ch1a1         148 LTHGDSSSGLLQP----LEGVGQICHQHDCLLIVDAVAS-LCGV----PFYMDKWEIDAVYTGAQKVLGAP-PGITPISI  217 (388)
T ss_dssp             EESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-BTTB----CCCTTTTTCCEEECCCC-CCCCC-SSCEEEEE
T ss_pred             eeecccccccccc----hhhhcchhccccceeeeeeeec-cccc----ccchhccCceEEEEccccccCCC-CeEEEEec
Confidence            7777788888888    7899999999999999999998 5422    233444556888777  678775 45788888


Q ss_pred             CHHHHHHhhhccCCCCc---------------ccccCC-CCCcHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHhhh
Q 010250          355 SPEVSEVIHSQSNTLGS---------------FSHGFT-YSGHPVSCAVAIEALKIYKERNI---VEQVNKIAPKFQDGV  415 (514)
Q Consensus       355 ~~~i~~~l~~~~~~~~~---------------~~~~~t-~~~~pl~~aaa~aal~~~~~~~~---~~~~~~~~~~l~~~L  415 (514)
                      +++..+.+.........               ...+.+ +..+.....+..++++.+.....   ..+.+......+..+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (388)
T d2ch1a1         218 SPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGL  297 (388)
T ss_dssp             CHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHhhhcccCccccccccchhhhhhhcccccccccCccchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhh
Confidence            98887766542211110               011122 23345556666677776655443   333333444444444


Q ss_pred             hhccCCCceeEE-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHH-CCcEEEee-----CCEEEEe-CCCCCCHH
Q 010250          416 KAFSDSPIIGEI-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEK-HGMLVRVS-----GDNIMMS-PPFIMSPE  487 (514)
Q Consensus       416 ~~l~~~~~~~~v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~Gv~~~~~-----g~~iRi~-p~~~~t~e  487 (514)
                      ........+.+. .....+..+.+++..           ....+...|.+ +||.+..+     ++.+|++ .....|+|
T Consensus       298 ~~~~~~~~~~~~~~rs~~v~~~~~p~g~-----------~~~~l~~~l~~~~gI~v~~G~~~~~~~~~RIs~~g~~~t~e  366 (388)
T d2ch1a1         298 GKMGLDIFVKDPRHRLPTVTGIMIPKGV-----------DWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQ  366 (388)
T ss_dssp             HHHTCCBSSCSGGGBCTTEEEEECCTTC-----------CHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHH
T ss_pred             hhcccccccCCHHHhCCeEEEEECCCCC-----------CHHHHHHHHhhcCCEEEeCCCccccCCEEEEcCCcCCCCHH
Confidence            443111111111 112234566665321           13456677765 59988753     4679999 34567899


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010250          488 EVDELISKYGKALKAT  503 (514)
Q Consensus       488 ~id~~~~~l~~~l~~~  503 (514)
                      ||+.++++|+++|++.
T Consensus       367 dI~~ll~alke~L~~~  382 (388)
T d2ch1a1         367 KIQFYLYGFKESLKAT  382 (388)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999999864

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=99.60  E-value=1.7e-14  Score=147.39  Aligned_cols=215  Identities=13%  Similarity=0.087  Sum_probs=133.3

Q ss_pred             HHHHHHHHHHh-CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCch
Q 010250          257 ANNLEDLILKE-GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDL  335 (514)
Q Consensus       257 ~~~le~li~~~-~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDi  335 (514)
                      +++|++.+.+. ..+.+++|++...+..+|.+.+    +++|.++|++||+++|+|+++.++......+.........|+
T Consensus       196 ~~~l~~~i~~~~~~~~~~~v~~~~~~~~~g~~~~----l~~i~~~~~~~~~~l~vD~a~g~~~~~~~~~~~~~~~~~~D~  271 (434)
T d2z67a1         196 VEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD----IVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVDA  271 (434)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC----HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCSE
T ss_pred             HHHHHHHHHhhhhcCCceEEEeccCcCCCccccC----HHHHHHHHHHhCCeEEEeccchhhhhhccccccccccCCcce
Confidence            68899888753 2346778888888778888877    999999999999999999999643111001111122335688


Q ss_pred             hchh--hhhcCCcccceeEEeC-HHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Q 010250          336 VSFA--KALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQ  412 (514)
Q Consensus       336 v~~s--K~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~  412 (514)
                      ++++  |.++++ .+.|+++.+ +.+++.+..       ...+.+...+...+.+++..+.....+++.++..++.++++
T Consensus       272 ~~~s~hK~l~~~-~g~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~l~~~~~~g~~~~~~~~~~~a~~l~  343 (434)
T d2z67a1         272 VVSSSDKNLLTP-IGGGLVYSTDAEFIKEISL-------SYPGRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLD  343 (434)
T ss_dssp             EEEEHHHHHCCC-SSCEEEEESCHHHHHHHHT-------TSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEcCccccccC-CCccccccCcHHHHHHHHh-------hcccccccchHHHHHHHHHHHHHhcchhHHHHHHHHHHHHH
Confidence            8765  988875 455666655 556666653       12222333333333333333332223456777888888999


Q ss_pred             hhhhhcc---CCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----------------C
Q 010250          413 DGVKAFS---DSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------------G  473 (514)
Q Consensus       413 ~~L~~l~---~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------g  473 (514)
                      +.|+++.   ...+... + ......+.+.  .           ....+...|.++|+.....                .
T Consensus       344 ~~L~~l~~~~g~~ll~~-~-~~~~~~~~~~--~-----------~~~~l~~~L~~~gI~g~~v~~~l~~~g~~~~~~~~~  408 (434)
T d2z67a1         344 ELLNDLSKKTGGKFLDV-E-SPIASCISVN--S-----------DPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTH  408 (434)
T ss_dssp             HHHHHHHHHSSCCBCCC-C-CSSEEEEECS--S-----------CHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSC
T ss_pred             HHHHHhhhhcCceecCC-C-CCceeeeecC--C-----------CHHHHHHHHHHcCCeeeehhhhccccCeeeecccCC
Confidence            9888762   1122111 0 1111122221  1           1345778899999854310                1


Q ss_pred             CEEEEeCCCCCCHHHHHHHHHHHHH
Q 010250          474 DNIMMSPPFIMSPEEVDELISKYGK  498 (514)
Q Consensus       474 ~~iRi~p~~~~t~e~id~~~~~l~~  498 (514)
                      +.+|++.+..+|+||||.++++|++
T Consensus       409 ~~l~~~~s~~~T~edID~~i~~L~k  433 (434)
T d2z67a1         409 DYIVMNAAIGVRTEDIVNSVSKLEK  433 (434)
T ss_dssp             CEEEEECCTTCCHHHHHHHHHHHHT
T ss_pred             CeEEEecCCCCCHHHHHHHHHHHhc
Confidence            5699999999999999999999975

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.59  E-value=1.6e-14  Score=144.92  Aligned_cols=301  Identities=13%  Similarity=0.074  Sum_probs=177.7

Q ss_pred             HHHHHHHHHhcC---cCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeee-cCCCccccC
Q 010250          147 LDLAKELLEMFT---ASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAAS-LSGLPALHQ  222 (514)
Q Consensus       147 ~ela~~L~~~~~---~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~-~s~~~~~~~  222 (514)
                      .+..+.+.+.+.   +.+.+.++|++|||+|++.+++....     ...+.+++++...++++....... ..+..... 
T Consensus        39 ~~~~~~~r~~~~~~~~~~~~~i~~t~sgT~a~~~~~~~l~~-----~~~~gd~vlv~~~~~~~~~~~~~~~~~~~~~~~-  112 (382)
T d2bkwa1          39 QRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFIL-----SKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDV-  112 (382)
T ss_dssp             HHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSC-----TTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEE-
T ss_pred             HHHHHHHHHHHhhhcCCCCeEEEEeCcHHHHHHHHHHHHHH-----hcCCCCceEEEEechhhhhhhhhcccccccccc-
Confidence            344444555542   23567899999999999999986521     112346888888877775322211 11111000 


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                                ....+.  ....           +.+++++++.+   .++..+++-.+.+++|...|    ++.+.++|+
T Consensus       113 ----------~~~~~~--~~~~-----------~~~~~~~~~~~---~~~~~v~~~~~~~~tg~~~~----~~~~~~~~~  162 (382)
T d2bkwa1         113 ----------VRPLKI--GESV-----------PLELITEKLSQ---NSYGAVTVTHVDTSTAVLSD----LKAISQAIK  162 (382)
T ss_dssp             ----------ECCSST--TSCC-----------CHHHHHHHHHH---SCCSEEEEESEETTTTEECC----HHHHHHHHH
T ss_pred             ----------ccccCC--CCcc-----------chhHHHHHhhh---ccchheeeeecccccccccc----chhhhhhcc
Confidence                      000000  0000           03555555543   34557777788888898888    899999988


Q ss_pred             hcC--CEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCcccceeEEeCHHHHHHhhhccC--CCCc-----
Q 010250          303 KYD--ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGAILVSPEVSEVIHSQSN--TLGS-----  371 (514)
Q Consensus       303 ~~g--illI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~v~~~~~i~~~l~~~~~--~~~~-----  371 (514)
                      +++  +++++|-+|+ +|..    .++......|++++|  |+++|. ..+|+++.++++.+.+.+...  ....     
T Consensus       163 ~~~~~~~~~vDa~qs-~g~~----pid~~~~giD~~~~s~~K~l~gP-~G~g~l~vs~~~~~~~~~~~~~~~~~~~~~~~  236 (382)
T d2bkwa1         163 QTSPETFFVVDAVCS-IGCE----EFEFDEWGVDFALTASQKAIGAP-AGLSISLCSSRFMDYALNDSKNGHVHGYFSSL  236 (382)
T ss_dssp             HHCTTSEEEEECTTT-TTTS----CCCTTTTTCSEEEEESSSTTCCC-SCEEEEEECHHHHHHHTCHHHHCCCSCSTTCH
T ss_pred             ccccceeeeeecccc-cccc----cccccccCeeEEeecccccCcCC-CchhhhhccHHHHhhhhhcccCCCcccchhhh
Confidence            775  9999999998 5433    233333345888776  899875 568999999998876643110  0000     


Q ss_pred             -----------ccccCC-CCCcHHHHHHHHHHHHHHhhccH---HHHHHHHHHHHHhhhhhccCCCc----eeEEEeeee
Q 010250          372 -----------FSHGFT-YSGHPVSCAVAIEALKIYKERNI---VEQVNKIAPKFQDGVKAFSDSPI----IGEIRGTGL  432 (514)
Q Consensus       372 -----------~~~~~t-~~~~pl~~aaa~aal~~~~~~~~---~~~~~~~~~~l~~~L~~l~~~~~----~~~v~g~g~  432 (514)
                                 ...+.+ +..+..+..+..++|+.+.+++.   .++.+++.+++++.+........    ....+ ...
T Consensus       237 ~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~aL~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~-s~~  315 (382)
T d2bkwa1         237 RRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMS-AHG  315 (382)
T ss_dssp             HHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTB-CSS
T ss_pred             hhhhhhhhcccccccccccCCcHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhhcccccccccCchhcc-CCc
Confidence                       001122 23445566777788998876553   45566677778777764311110    00111 112


Q ss_pred             eEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee------CCEEEEe-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          433 ILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------GDNIMMS-PPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       433 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------g~~iRi~-p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      +..+.+.+              ...+.+.|.++||.+..+      ++.+||+ ..+..++|+|+.+++.|+...+.++
T Consensus       316 v~~~~~~~--------------~~~~~~~L~~~gi~i~~G~~~~~~~~~~Ri~~~G~~~~~e~i~~l~~~l~~i~~~L~  380 (382)
T d2bkwa1         316 LTAVYVAD--------------PPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQ  380 (382)
T ss_dssp             CEEEECSC--------------HHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTT
T ss_pred             EEEEcCCC--------------HHHHHHHHHHCCeEEECCCChhhcCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHHHC
Confidence            33444332              345778889999998754      2469998 3345677888888888775554443

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.59  E-value=6.9e-15  Score=148.35  Aligned_cols=342  Identities=11%  Similarity=0.032  Sum_probs=181.2

Q ss_pred             EEccCCcccccCCC--CCHHHHHHHHHHHhcCC-ccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH
Q 010250          103 LDSLAGLWCTALGG--SEPRLVAAATAQLNTLP-FYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV  179 (514)
Q Consensus       103 lD~~s~~~~~~lGh--~~p~v~~A~~~~l~~~~-~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al  179 (514)
                      ||+.-|..-..-|.  ..|.|.+|+.+.+++.. +.+....+..+....+++.+............+.+.+|+.+...++
T Consensus        29 InL~iG~~~d~~g~~~~~~~V~~A~~~~~~~~~~~~Y~p~~G~~~lr~aia~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  108 (394)
T d2ay1a_          29 IDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGLKSETTATLATVGGTGALRQAL  108 (394)
T ss_dssp             EECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHHHHH
T ss_pred             EEccCCCccCCCCCCCCCHHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhccccccccccceeccCchHHHHHHH
Confidence            56655543344554  35889999888776532 2111112233333444444433322223345566777776766665


Q ss_pred             HHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250          180 KLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN  259 (514)
Q Consensus       180 k~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (514)
                      .+....      ...+.|++.+++|-.+.......+......             ++...      .....     +.++
T Consensus       109 ~~~~~~------~~gd~V~~p~p~~~~y~~~~~~~g~~~v~~-------------~~~~~------~~~~~-----~~~~  158 (394)
T d2ay1a_         109 ELARMA------NPDLRVFVSDPTWPNHVSIMNFMGLPVQTY-------------RYFDA------ETRGV-----DFEG  158 (394)
T ss_dssp             HHHHHH------CTTCCEEEEESCCHHHHHHHHHHTCCEEEE-------------ECEET------TTTEE-----CHHH
T ss_pred             HHhhhc------CCceEEEEecccccchHHHHHHcCCEEEEe-------------cccch------hcccc-----cchh
Confidence            543322      345689999999976644433333322110             00000      00000     0244


Q ss_pred             HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccce--ecc-cCCCCc--
Q 010250          260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFG--CDK-YSIKPD--  334 (514)
Q Consensus       260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~--~~~-~gv~pD--  334 (514)
                      +++...... +.+.++++.+.+|.+|. ..+++.+++|.++|++|++++|.||+|.+|...+....  ... .....+  
T Consensus       159 ~~~~~~~~~-~~~~i~~~~~p~NPTG~-~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~  236 (394)
T d2ay1a_         159 MKADLAAAK-KGDMVLLHGCCHNPTGA-NLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVL  236 (394)
T ss_dssp             HHHHHHTCC-TTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEE
T ss_pred             HHHHHhhcc-cCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHhhcceEEEEEeccchhhcccccccchhhhhhhhhccccc
Confidence            555554443 34556666666666675 45789999999999999999999999998865543211  110 001112  


Q ss_pred             -hhchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCC-cHHHHHHHHHHHH--HH----hh--ccHHHHH
Q 010250          335 -LVSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSG-HPVSCAVAIEALK--IY----KE--RNIVEQV  404 (514)
Q Consensus       335 -iv~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~-~pl~~aaa~aal~--~~----~~--~~~~~~~  404 (514)
                       +.++||.++..++++|++++.....+......... ......++.. +...++.+...+.  .+    .+  +.+.+++
T Consensus       237 ~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  315 (394)
T d2ay1a_         237 IAASCSKNFGIYRERTGCLLALCADAATRELAQGAM-AFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSGM  315 (394)
T ss_dssp             EEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHH-HHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccCCcccccchhhchhHHHHHHHhhhhh-HhhhcccccchhHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Confidence             23578876654499999998766544332110000 0011122222 2222322222221  11    11  2356677


Q ss_pred             HHHHHHHHhhhhhcc-C--CCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHH-HHCCcEEEeeCCEEEEeC
Q 010250          405 NKIAPKFQDGVKAFS-D--SPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLVRVSGDNIMMSP  480 (514)
Q Consensus       405 ~~~~~~l~~~L~~l~-~--~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~g~~iRi~p  480 (514)
                      .++++.|.+.|+++. .  .+.+  ....|.+.++.+.                ..++++| .++||++.+++   ||+.
T Consensus       316 ~~~r~~l~~~L~~~~~~~~~~~~--~~~~G~F~~~~ls----------------~~~~~~L~~~~~V~~~~g~---Ri~~  374 (394)
T d2ay1a_         316 LRLREQLAGELRDLSGSDRFGFV--AEHRGMFSRLGAT----------------PEQVKRIKEEFGIYMVGDS---RINI  374 (394)
T ss_dssp             HHHHHHHHHHHHHHHTSSTTTHH--HHCCSSEEECCCC----------------HHHHHHHHHHHCEECCTTC---EEEG
T ss_pred             HHHHHHHHHHHHHhCCCCceeeE--CCCceeEEecCcC----------------HHHHHHHHHhCCEEecCCC---EEEe
Confidence            778888888887762 1  1221  1223555444331                1244555 46799888653   8874


Q ss_pred             CCCCCHHHHHHHHHHHHHH
Q 010250          481 PFIMSPEEVDELISKYGKA  499 (514)
Q Consensus       481 ~~~~t~e~id~~~~~l~~~  499 (514)
                      + .+++++|+.+.++|.++
T Consensus       375 a-~l~~~~i~~l~~ai~~v  392 (394)
T d2ay1a_         375 A-GLNDNTIPILARAIIEV  392 (394)
T ss_dssp             G-GCCTTTHHHHHHHHHHH
T ss_pred             c-CCCHHHHHHHHHHHHHh
Confidence            2 47889999988888764

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=99.58  E-value=7.5e-14  Score=141.55  Aligned_cols=346  Identities=13%  Similarity=0.093  Sum_probs=181.6

Q ss_pred             EEccCCcccccCCCC--CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcC-----CCCeE--EEeCChhH
Q 010250          103 LDSLAGLWCTALGGS--EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTAS-----KMAKV--FFTNSGSE  173 (514)
Q Consensus       103 lD~~s~~~~~~lGh~--~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~-----~~~~v--~~~~sGse  173 (514)
                      ||+.-|.....-|..  .|.|.+|...........+.  ..+.....+|.+.+++++...     ..+.+  .-+.+|..
T Consensus        32 InL~iG~~~d~~g~~~~~~~V~~A~~~l~~~~~~~~~--Y~p~~G~~~lr~aia~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (412)
T d1yaaa_          32 VDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHE--YLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTG  109 (412)
T ss_dssp             EECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCC--CCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHH
T ss_pred             EEeecCCCcCCCCCCCCcHHHHHHHHHHHhCcccCCC--CCCCCCCHHHHHHHHHHHhcccCccccccceeEEecccchh
Confidence            787666444555643  36777764433332211111  112233345555555543111     11222  22344555


Q ss_pred             HHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHH
Q 010250          174 ANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYS  253 (514)
Q Consensus       174 A~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (514)
                      +...++.+....      .+.+.|++.+++|..+.......+..........           ...+.        .   
T Consensus       110 ~~~~~~~~~~~~------~~gd~Vlip~P~~~~y~~~~~~~g~~~~~~~~~~-----------~~~~~--------~---  161 (412)
T d1yaaa_         110 ALHISAKFFSKF------FPDKLVYLSKPTWANHMAIFENQGLKTATYPYWA-----------NETKS--------L---  161 (412)
T ss_dssp             HHHHHHHHHHHH------CTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEE-----------TTTTE--------E---
T ss_pred             HHHHHHHHHhcc------CCCCEEecccccCchhHHHHHHcCCceecccccc-----------ccccc--------c---
Confidence            544444333211      3457899999999887554444333221110000           00000        0   


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc-e------e
Q 010250          254 TRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF-G------C  326 (514)
Q Consensus       254 ~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~-~------~  326 (514)
                        +.+.++..+.... +...++++.+.+|.+|.+ .+++.+++|.++|+++++++|.||+|.+|...+... .      .
T Consensus       162 --~~~~~~~~~~~~~-~~~~~i~i~~P~NPTG~~-~s~~~~~~i~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~  237 (412)
T d1yaaa_         162 --DLNGFLNAIQKAP-EGSIFVLHSCAHNPTGLD-PTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGV  237 (412)
T ss_dssp             --CHHHHHHHHHHSC-TTCEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHH
T ss_pred             --cchhhhcccccCC-CceEEEEecCCCCCcccc-CCHHHHHHHHhhhccCCEEEeecceeeecccCCcccchhhhhhhh
Confidence              0244555555443 345566666667777754 578999999999999999999999999886554311 0      1


Q ss_pred             cccCCCCchh---chhhhhcCCcccceeEEeCHHHHHHhhhccC----CCCcccccCCCCCcHHHHHHHHHHHHHH----
Q 010250          327 DKYSIKPDLV---SFAKALSSAYMPIGAILVSPEVSEVIHSQSN----TLGSFSHGFTYSGHPVSCAVAIEALKIY----  395 (514)
Q Consensus       327 ~~~gv~pDiv---~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~----~~~~~~~~~t~~~~pl~~aaa~aal~~~----  395 (514)
                      ...+..+.++   ++||.++-.++++|++++.+++.+.+.....    ...........+.+.+++.++...++.-    
T Consensus       238 ~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~  317 (412)
T d1yaaa_         238 EKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTE  317 (412)
T ss_dssp             HHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHH
T ss_pred             hccccCCCeEEEEecCCccccCcCceEEEEEchhhhhhHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHhcChHHHH
Confidence            1223333333   5789776534999999987654322110000    0000111223345556666665555321    


Q ss_pred             --hh--ccHHHHHHHHHHHHHhhhhhccCCCceeEEEee-eeeEEEEEccCCCCCCCCCCccchHHHHHHHH-HHCCcEE
Q 010250          396 --KE--RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGT-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQC-EKHGMLV  469 (514)
Q Consensus       396 --~~--~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~  469 (514)
                        .+  +.+.++++++++.+.+.|+++........+... |++.++.+.               . .++++| .++||++
T Consensus       318 ~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~~~~gG~F~~~~ls---------------~-e~~~~L~~e~~V~~  381 (412)
T d1yaaa_         318 QWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLT---------------P-QMVKRLEETHAVYL  381 (412)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCC---------------H-HHHHHHHHHHCEEC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCceeCCCceEEEecCcC---------------H-HHHHHHHHhCCEEE
Confidence              11  234567777888888888776211111112223 333332221               1 234444 6789887


Q ss_pred             EeeCCEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          470 RVSGDNIMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       470 ~~~g~~iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      .+++   ||+.. ..+++.|+.+.++|.++++.
T Consensus       382 ~~g~---Ris~~-g~~~~~i~~l~~ai~~v~k~  410 (412)
T d1yaaa_         382 VASG---RASIA-GLNQGNVEYVAKAIDEVVRF  410 (412)
T ss_dssp             CTTS---EEEGG-GCCTTTHHHHHHHHHHHHHH
T ss_pred             CCCC---EEEec-cCCHHHHHHHHHHHHHHHHh
Confidence            6643   88732 37888999999999888764

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=99.58  E-value=2.4e-15  Score=151.98  Aligned_cols=346  Identities=11%  Similarity=0.008  Sum_probs=180.4

Q ss_pred             EEccCCcccccCCCC--CHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCc-----CCCCeEEEeCChhHHH
Q 010250          103 LDSLAGLWCTALGGS--EPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTA-----SKMAKVFFTNSGSEAN  175 (514)
Q Consensus       103 lD~~s~~~~~~lGh~--~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~-----~~~~~v~~~~sGseA~  175 (514)
                      ||+.-|.+..+-|..  .|.|.+|........... .. ..+.....+|.+.+++++..     ...++++.+.+++.+.
T Consensus        29 InL~iG~~~d~~g~~p~~~~V~~A~~~l~~~~~~~-~~-Y~p~~G~~~lR~aia~~~~~~~~~~~~~~~i~~~~~~~~~~  106 (397)
T d3tata_          29 VNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGA-SL-YLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSG  106 (397)
T ss_dssp             EECSCCSCCCTTSSCCCCHHHHHHHHHHTTSCCSS-BC-CCCTTCCHHHHHHHHHHHTCSSCHHHHTTCEEECCBSHHHH
T ss_pred             EEccCCCCcCCCCCCCCcHHHHHHHHHHHhCcccC-CC-CCCcccCHHHHHHHHHHHhhccCCcCCcCcEEEecCchhHH
Confidence            788777655666653  366777654332221111 11 12334445667777766532     1346777777766665


Q ss_pred             HHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHH
Q 010250          176 DTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTR  255 (514)
Q Consensus       176 ~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (514)
                      ..++.++....   . .+.+.|++.+++|.++.......+....... ..          ....+.        .     
T Consensus       107 ~~~l~~~~~~~---~-~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~v~-~~----------~~~~~~--------~-----  158 (397)
T d3tata_         107 ALKVGADFLKR---Y-FPESGVWVSDPTWENHVAIFAGAGFEVSTYP-WY----------DEATNG--------V-----  158 (397)
T ss_dssp             HHHHHHHHHHH---H-CSSCCCEECSSCCTTHHHHHHTTTCCCEECC-CC----------CTTTSS--------C-----
T ss_pred             HHHHHHHHhhh---c-CCCCcceecccCccccHHHHHHcCCEEEEEe-cc----------hhhccc--------c-----
Confidence            55554432111   1 3356799999999988655554443321110 00          000000        0     


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccc--ee-cccCCC
Q 010250          256 LANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMF--GC-DKYSIK  332 (514)
Q Consensus       256 ~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~--~~-~~~gv~  332 (514)
                      +.+++.+.+.... ++..++++...+|.+|. +.+++.+++|.++|++||+++|.||+|.++...+...  .. ...+..
T Consensus       159 ~~~~~~~~~~~~~-~~~~~~~~~~p~NPTG~-~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~  236 (397)
T d3tata_         159 RFNDLLATLKTLP-ARSIVLLHPCCHNPTGA-DLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAG  236 (397)
T ss_dssp             CHHHHHHHHTTCC-SSCCCEECSSSCSSSCC-CCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTT
T ss_pred             chHHHHHHhhhcc-cccEEEEecCCCCCCCe-eCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCcccchhhhhhhhcC
Confidence            0234444443333 34445555555566664 4578999999999999999999999999885443211  11 111222


Q ss_pred             Cch---hchhhhhcCCcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHHHHHHH---Hh---h--ccHH
Q 010250          333 PDL---VSFAKALSSAYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKI---YK---E--RNIV  401 (514)
Q Consensus       333 pDi---v~~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~---~~---~--~~~~  401 (514)
                      +++   .++||.++-.++++|++++....++..................+.+...++++...+.-   ..   +  +.+.
T Consensus       237 ~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~  316 (397)
T d3tata_         237 LPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLAEVEEMR  316 (397)
T ss_dssp             CCCEECBCCHHHHTBTTTCCBCCEEECSSTTHHHHHHHHHHHHTTTTTSSCCSHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred             CceEEEecCcccccccCccccccccchhHHHHHHHHHHHHHHHhhcccccccHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence            233   36889776644999999987654333221000000011112222333344433333321   10   0  1234


Q ss_pred             HHHHHHHHHHHhhhhhc-cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHH-HCCcEEEeeCCEEEEe
Q 010250          402 EQVNKIAPKFQDGVKAF-SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCE-KHGMLVRVSGDNIMMS  479 (514)
Q Consensus       402 ~~~~~~~~~l~~~L~~l-~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~g~~iRi~  479 (514)
                      ++++++.+.+.+.|... ....+.......|.+.++.+.                ..++++|+ +.||.+.+++   ||+
T Consensus       317 ~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~G~F~~~~ls----------------~e~~~~L~~e~~V~l~~g~---Ri~  377 (397)
T d3tata_         317 TRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLS----------------AAQVDRLREEFGVYLIASG---RMC  377 (397)
T ss_dssp             HHHHHHHHHHHHTTTTTCTTSCTTHHHHCCSSBCCCCCC----------------HHHHHHHTTTTCEECCSSS---CCB
T ss_pred             HHHHHHHHHHHHHHHHhCCCCceEEEcCCCceEEecCcC----------------HHHHHHHHHhCCEEeCCCC---EEE
Confidence            45555556666666544 111111112234544444331                12445554 5688887654   888


Q ss_pred             CCCCCCHHHHHHHHHHHHHHH
Q 010250          480 PPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       480 p~~~~t~e~id~~~~~l~~~l  500 (514)
                      .+ .+++++|+.+.++|.+++
T Consensus       378 ~a-~~~~~~i~~~~~ai~~v~  397 (397)
T d3tata_         378 VA-GLNTANVQRVAKAFAAVM  397 (397)
T ss_dssp             TT-SCCTTTHHHHHHHHHHHC
T ss_pred             ec-cCCHHHHHHHHHHHHHhC
Confidence            43 578899999999887763

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.58  E-value=3.1e-14  Score=146.64  Aligned_cols=324  Identities=11%  Similarity=0.072  Sum_probs=171.7

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCccccee-eeecCCCc-c
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLI-AASLSGLP-A  219 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~-~~~~s~~~-~  219 (514)
                      +.....++++++++++   +.++++|+++||++...|+-.+.        .++.+.|+.+...|.+..- +..+++.. .
T Consensus        64 ~~~~i~eae~~~A~~~---ga~~a~f~~~Gtt~~n~a~i~a~--------~~~gd~Vi~~~~~H~Sv~~~~~~l~~~~~~  132 (462)
T d1c4ka2          64 HEGPAVAAEKHAARVY---NADKTYFVLGGSSNANNTVTSAL--------VSNGDLVLFDRNNHKSVYNSALAMAGGRPV  132 (462)
T ss_dssp             TBTHHHHHHHHHHHHT---TCSEEEEESSHHHHHHHHHHHHH--------CCTTCEEEEETTCCHHHHHHHTTTTCCEEE
T ss_pred             CCHHHHHHHHHHHHHh---CCCeEEEECCchHHHHHHHHHHh--------cCCCCeEEecccchHHHHHHHHHHhcCCce
Confidence            4566788999999998   46799999999888777765443        2233455556677776543 22333221 1


Q ss_pred             ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHH-----HHhCCCcEEEEEEccccCCCCcccCChhHH
Q 010250          220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLI-----LKEGPETIAAFIAEPVIGAGGVIPPPATYF  294 (514)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li-----~~~~~~~~aavivEpv~~~~G~~~p~~~~L  294 (514)
                      +.....-+.....             ..+.+++..   +.+++.+     .+....+...+++..+++..|.+.+    +
T Consensus       133 ~~~~~~~~~g~~~-------------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~G~~~d----l  192 (462)
T d1c4ka2         133 YLQTNRNPYGFIG-------------GIYDSDFDE---KKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYN----A  192 (462)
T ss_dssp             EECEEECTTCCEE-------------EECGGGSCH---HHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEEC----H
T ss_pred             eeecccccccccC-------------CCChHHhhH---HHHHhhhhhhcHHhhhccCCceeEEEEeeeeccchhh----H
Confidence            1100000000000             000011111   1122111     1111234455666677788899988    9


Q ss_pred             HHHHHHHHhcCCEEEEechhcCcccccccc--eecccC----C--CCchhc--hhhhhcCCcccceeEEe-CHHHHH---
Q 010250          295 EKVQAVVKKYDILFIADEVICAFGRLGTMF--GCDKYS----I--KPDLVS--FAKALSSAYMPIGAILV-SPEVSE---  360 (514)
Q Consensus       295 ~~l~~l~~~~gillI~DEv~tG~gr~G~~~--~~~~~g----v--~pDiv~--~sK~l~gG~~pig~v~~-~~~i~~---  360 (514)
                      ++|.++|++||++|++||+|..-.......  .....+    .  ..|+++  +.|.+++.  ..|+++. +...+.   
T Consensus       193 ~~I~~ia~~~g~~l~vD~A~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~~S~HK~lg~~--~~g~ll~~~~~~~~~~~  270 (462)
T d1c4ka2         193 HEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGF--SQTSQIHKKDSHIKGQL  270 (462)
T ss_dssp             HHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCC--TTCEEEEEECGGGTTST
T ss_pred             HHHHHHHHHcCCEEEEechhhccccccCcCCcchhhccccccccCCccEEEEecCcccccc--cceEEEEeccccccccc
Confidence            999999999999999999997221111111  111111    1  237775  45988762  3344544 332221   


Q ss_pred             ------HhhhccCCCCcccccCCCCCcHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhccCCCce---eEEE
Q 010250          361 ------VIHSQSNTLGSFSHGFTYSGHPVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDSPII---GEIR  428 (514)
Q Consensus       361 ------~l~~~~~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~---~~v~  428 (514)
                            .+..      ......|.+++...++...++...+..   +++.++..++.++++++++++...-..   ..+.
T Consensus       271 ~~~~~~~~~~------~~~~~~t~sp~~~~~asl~~a~~~~~~~~g~~l~~~~~~~a~~~r~~l~~~~~~~~~~~~~~v~  344 (462)
T d1c4ka2         271 RYCDHKHFNN------SFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVN  344 (462)
T ss_dssp             TCCCHHHHHH------HHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEET
T ss_pred             hhhhHHHHHH------hhhhcccCCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhcccccccc
Confidence                  1110      011123445555555555555555543   356677788888888888775221000   0000


Q ss_pred             ee----------------------------------e-----eeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEE
Q 010250          429 GT----------------------------------G-----LILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLV  469 (514)
Q Consensus       429 g~----------------------------------g-----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~  469 (514)
                      +.                                  .     +-+.+...........++.....+..+.+.|.++||.+
T Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~k~~l~~~gi~~~~g~~~~~G~~~~~~~~~L~~~gI~~  424 (462)
T d1c4ka2         345 GKKWEDGDTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIP  424 (462)
T ss_dssp             TEEGGGSCHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCC
T ss_pred             cccccccchHhhhcccchhccCCcchhccccccCccceecccceeEEecCCccccccchhhcCCcHHHHHHHHHHcCCee
Confidence            00                                  0     00111111000000000111112456778889999987


Q ss_pred             EeeC-CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHH
Q 010250          470 RVSG-DNIMMSPPFIMSPEEVDELISKYGKALKATE  504 (514)
Q Consensus       470 ~~~g-~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~  504 (514)
                      -..+ +.||+.....+|++|||+++++|++..+.+.
T Consensus       425 e~~~~~~i~~~~s~~~T~edid~li~aL~ei~r~~~  460 (462)
T d1c4ka2         425 EKSDLNSILFLMTPAETPAKMNNLITQLLQLQRLIE  460 (462)
T ss_dssp             SEECSSEEEEECCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             eccCCCeEEEEecCCCCHHHHHHHHHHHHHHHHHHh
Confidence            6544 5799999999999999999999988765543

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.54  E-value=2.2e-13  Score=134.72  Aligned_cols=317  Identities=14%  Similarity=0.079  Sum_probs=183.1

Q ss_pred             CCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccE
Q 010250          117 SEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKK  196 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~  196 (514)
                      -+|+|++|+.+..  ..+.+..   ..+...+..+.|.+++. .+.+.++|+.|||+|+++++....        .++++
T Consensus        11 v~~~V~~am~~~~--~~hr~~~---f~~i~~~~~~~l~~ll~-~~~~~i~~~gsgT~a~e~~~~nl~--------~~g~~   76 (348)
T d1iuga_          11 LHPKALEALARPQ--LHHRTEA---AREVFLKARGLLREAFR-TEGEVLILTGSGTLAMEALVKNLF--------APGER   76 (348)
T ss_dssp             CCHHHHHHHHSCC--CCTTSHH---HHHHHHHHHHHHHHHHT-CSSEEEEEESCHHHHHHHHHHHHC--------CTTCE
T ss_pred             CCHHHHHHhcCCC--CCCCCHH---HHHHHHHHHHHHHHHhC-CCCCEEEEeCchHHHHHHHHHhcc--------ccccc
Confidence            3688888875432  2221111   12445667777777775 344678889999999999997653        33567


Q ss_pred             EEEEecCCcccceeeee-cCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEE
Q 010250          197 FIARQKSYHGSTLIAAS-LSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAF  275 (514)
Q Consensus       197 ii~~~~~yHG~t~~~~~-~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aav  275 (514)
                      ++++..+++|....... .-+...            .....+..  ....           .++    +.   ..++..+
T Consensus        77 vlv~~~G~f~~~~~~~a~~~~~~~------------~~~~~~~g--~~~~-----------~~~----~~---~~~~~~v  124 (348)
T d1iuga_          77 VLVPVYGKFSERFYEIALEAGLVV------------ERLDYPYG--DTPR-----------PED----VA---KEGYAGL  124 (348)
T ss_dssp             EEEEECSHHHHHHHHHHHHTTCEE------------EEEECCTT--CCCC-----------TTT----SC---CSSCSEE
T ss_pred             ceeecchHHHHHHHHHHHhcCccc------------ccccccCC--Cccc-----------ccc----cc---ccCCCee
Confidence            88888876664322111 111100            00001000  0000           000    01   1233445


Q ss_pred             EEccccCCCCcccCChhHHHHHHHHHHhcC--CEEEEechhcCcccccccceecccCCCCchhchh--hhhcCCccccee
Q 010250          276 IAEPVIGAGGVIPPPATYFEKVQAVVKKYD--ILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA--KALSSAYMPIGA  351 (514)
Q Consensus       276 ivEpv~~~~G~~~p~~~~L~~l~~l~~~~g--illI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG~~pig~  351 (514)
                      ++-.....+|.+.|    +++|.++|++|+  +++++|-+++ +|-.  ...++.++  .|++++|  |+|.|. ..+|.
T Consensus       125 ~~~h~eTstG~~~~----i~~i~~~~~~~~~~~l~~vDavss-~g~~--~i~~d~~~--iD~~~~~sqK~l~gp-pG~~~  194 (348)
T d1iuga_         125 LLVHSETSTGALAD----LPALARAFKEKNPEGLVGADMVTS-LLVG--EVALEAMG--VDAAASGSQKGLMCP-PGLGF  194 (348)
T ss_dssp             EEESEETTTTEECC----HHHHHHHHHHHCTTCEEEEECTTT-BTTB--CCCSGGGT--CSEEEEESSSTTCCC-SCEEE
T ss_pred             EEEecchhhhhhcc----HHHHHHHHHhhhccceeechhhhc-cccc--cccccccc--CCEEEeccccceecC-Cceee
Confidence            55555556688888    999999999985  7899999997 5432  23344454  4887765  999885 46889


Q ss_pred             EEeCHHHHHHhhhccCCCC------cccccCCCCCcHH-HHHHHHHHHHHHhhccHHHHH---HHHHHHHHhhhhhccCC
Q 010250          352 ILVSPEVSEVIHSQSNTLG------SFSHGFTYSGHPV-SCAVAIEALKIYKERNIVEQV---NKIAPKFQDGVKAFSDS  421 (514)
Q Consensus       352 v~~~~~i~~~l~~~~~~~~------~~~~~~t~~~~pl-~~aaa~aal~~~~~~~~~~~~---~~~~~~l~~~L~~l~~~  421 (514)
                      ++.+++.++.+++.+....      ....+.+....|+ .+.+..++|+.+.++ ..++.   +.....++..+++. ..
T Consensus       195 v~~s~~~le~~~~~~~~~dl~~~~~~~~~~~~~~Tp~v~~i~~l~~aL~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-gl  272 (348)
T d1iuga_         195 VALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG-GL  272 (348)
T ss_dssp             EEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred             eeechHHHhhhcccccccchhhhhhhhccCcccccccchHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHhhhhhhh-hh
Confidence            9999998887654321111      1112334333444 555556788877543 22222   22223333333332 11


Q ss_pred             CceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----CCEEEEeCCCCCCHHHHHHHHHHH
Q 010250          422 PIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----GDNIMMSPPFIMSPEEVDELISKY  496 (514)
Q Consensus       422 ~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----g~~iRi~p~~~~t~e~id~~~~~l  496 (514)
                      .....- ....+..+.+++.-           ....+...|.++|+.+.++     +..+||.-.-..+++|++.+++.|
T Consensus       273 ~~~~~~-~s~~v~~~~~P~g~-----------~~~~~~~~l~~~gi~i~~G~~~l~~~~~RIg~mG~~~~~d~~~~~~~l  340 (348)
T d1iuga_         273 RPVPKR-FSPAVAAFYLPEGV-----------PYARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMF  340 (348)
T ss_dssp             EESCSS-BCTTCEEEECCTTC-----------CHHHHHHHHHTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHH
T ss_pred             ccChhh-cCCeEEEEECCCCC-----------CHHHHHHHHHHCCeEEEcCccccCCCEEEEeCCCCCCHHHHHHHHHHH
Confidence            111111 11224556654321           1456778899999988764     457999966679999999999999


Q ss_pred             HHHHHHH
Q 010250          497 GKALKAT  503 (514)
Q Consensus       497 ~~~l~~~  503 (514)
                      +++|+++
T Consensus       341 ~~~l~~~  347 (348)
T d1iuga_         341 REVLEEI  347 (348)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            9999875

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=99.49  E-value=4.5e-13  Score=136.83  Aligned_cols=360  Identities=11%  Similarity=0.013  Sum_probs=204.2

Q ss_pred             CCCCEEEEccCCcccccCCCCCHHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCC----CCeEEEeCChh
Q 010250           97 VNGKKYLDSLAGLWCTALGGSEPRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASK----MAKVFFTNSGS  172 (514)
Q Consensus        97 ~dG~~ylD~~s~~~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~----~~~v~~~~sGs  172 (514)
                      .|||.-+++.+...    -+-+|++.+.+.+.+++.......+-..++...+..+.|+++++.+.    ..--.++++||
T Consensus        50 ~dg~~~~n~asf~~----t~~~~~~~~l~~~~~~~N~~~~~~~P~~~~lE~~~v~~la~L~~~p~~~~~~~~G~~t~GgS  125 (450)
T d1pmma_          50 LDGNARQNLATFCQ----TWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSS  125 (450)
T ss_dssp             GSCCGGGBCSCCSC----CCCCHHHHHHHHHTTTCBTTCTTTSHHHHHHHHHHHHHHHHHTTCCCCTTSCCSEEEESSHH
T ss_pred             cCCCcccccccccc----CCCCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCccccCCCcCeeeCchH
Confidence            35654445544311    12478888888888776332211111123445556677788775321    11258999999


Q ss_pred             HHHHHHHHHHHHHHhh----cCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCC-CCcccCCCCCC
Q 010250          173 EANDTQVKLVWYYNNA----LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDC-PHYWRYAHPGE  247 (514)
Q Consensus       173 eA~~~Alk~a~~~~~~----~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  247 (514)
                      ||+..|+.++|..+..    .+......+++ ....|.+...+...-|.....            ++. +..++      
T Consensus       126 eA~~~a~~aar~~~~~~~~~~g~~~~~~~~~-~~~~H~s~~Kaa~~~gi~~~~------------v~~~~~~~~------  186 (450)
T d1pmma_         126 EACMLGGMAMKWRWRKRMEAAGKPTDKPNLV-CGPVQICWHKFARYWDVELRE------------IPMRPGQLF------  186 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTCCCSCCEEE-ESSCCHHHHHHHHHTTCEEEE------------CCCBTTBCS------
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCCCCCCceEE-ecccHHHHHHHHHHcCCCceE------------eeecCCCCc------
Confidence            9999999998754322    23333334444 456687655554444432111            111 11111      


Q ss_pred             ChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH------HHhcCCEEEEechhcCccccc
Q 010250          248 TEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV------VKKYDILFIADEVICAFGRLG  321 (514)
Q Consensus       248 ~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l------~~~~gillI~DEv~tG~gr~G  321 (514)
                             .+.++|++++.    +++++|++--....+|.+.|    +++|.++      |+++|+++++|-++.|+--  
T Consensus       187 -------~d~~~L~~~i~----~~t~~Vv~t~gtt~tG~~dp----v~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~--  249 (450)
T d1pmma_         187 -------MDPKRMIEACD----ENTIGVVPTFGVTYTGNYEF----PQPLHDALDKFQADTGIDIDMHIDAASGGFLA--  249 (450)
T ss_dssp             -------CCHHHHHHHCC----TTEEEEECBBSCTTTCBBCC----HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTH--
T ss_pred             -------CcHHHHHHHhh----hCceEEEeeeeeccCCCccc----cchhhHHHHHHHHHhccCcEEEeehhhcccee--
Confidence                   11467777664    46777777777777788877    6766666      4668999999999987521  


Q ss_pred             ccceecc----cCC-CCchhchh--hhhcCCcccceeEEeCHHH-HHH-hhhccCCCCcccccCCC--CCcHHHHHHHHH
Q 010250          322 TMFGCDK----YSI-KPDLVSFA--KALSSAYMPIGAILVSPEV-SEV-IHSQSNTLGSFSHGFTY--SGHPVSCAVAIE  390 (514)
Q Consensus       322 ~~~~~~~----~gv-~pDiv~~s--K~l~gG~~pig~v~~~~~i-~~~-l~~~~~~~~~~~~~~t~--~~~pl~~aaa~a  390 (514)
                       .+....    +++ ..|.++++  |.+.+. .++|+++.++.- ... +.....+.+.-....+.  +.+.....+..+
T Consensus       250 -p~~~~~~~~~~~~~~aDSi~~s~HK~~~~p-~g~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~~~~~  327 (450)
T d1pmma_         250 -PFVAPDIVWDFRLPRVKSISASGHKFGLAP-LGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYY  327 (450)
T ss_dssp             -HHHCTTCCCSTTSTTEEEEEEETTTTTCCC-SSCEEEEESSGGGSCGGGCEEEEETTEEEEECCSCCSCBSHHHHHHHH
T ss_pred             -eeechhhhhhhcccceeEeecChhhccCCC-CCeeEEEecChhhhhhhcccccCcCCCCcCCCcccCccchHHHHHHHH
Confidence             111111    233 25666665  766655 688999987542 211 11100011100111122  222233344455


Q ss_pred             HHHHHhhc---cHHHHHHHHHHHHHhhhhhccCCCceeEEEe-e-eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHC
Q 010250          391 ALKIYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIGEIRG-T-GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKH  465 (514)
Q Consensus       391 al~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g-~-g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  465 (514)
                      ++..+..+   +..++..++.++|.+.|++.....++..... . -.++.|.+.+.....      .. ...+...|.++
T Consensus       328 ~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~~~el~~~~~p~~~l~~V~Fr~~~~~~~~------~~-~~~l~~~L~~~  400 (450)
T d1pmma_         328 EFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPG------YT-LYDLSERLRLR  400 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEEEECCTTTBSSEEEEEECTTCCCS------SC-HHHHHHHHHTT
T ss_pred             HHhhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeCCCCCCceEEEEEecCCcccCC------CC-HHHHHHHHHHc
Confidence            56655443   4567788888899998887633223322111 1 124566665433211      11 34578899999


Q ss_pred             CcEEE----eeC----CEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 010250          466 GMLVR----VSG----DNIMMSPPFIMSPEEVDELISKYGKALKATEE  505 (514)
Q Consensus       466 Gv~~~----~~g----~~iRi~p~~~~t~e~id~~~~~l~~~l~~~~~  505 (514)
                      |..+.    |..    ..+|+.+.-..|++++|++++.|+++++.+++
T Consensus       401 Gw~v~~~~~p~~~~~~~~lRvvv~~~~t~e~~d~lv~dl~~~v~~l~~  448 (450)
T d1pmma_         401 GWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSD  448 (450)
T ss_dssp             TCBCCEEECCTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCeeeccCcCCCcCCcEEEEEEccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            97653    111    25899988889999999999999999988764

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.47  E-value=3.2e-13  Score=136.59  Aligned_cols=283  Identities=13%  Similarity=0.051  Sum_probs=164.6

Q ss_pred             hHHHHHHHHHHhc---CcC--CCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCcc
Q 010250          145 PSLDLAKELLEMF---TAS--KMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPA  219 (514)
Q Consensus       145 ~~~ela~~L~~~~---~~~--~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~  219 (514)
                      +..+|.+.|.+++   ++.  +-.+|+++++.+|++.+++...........-...++||+..+.|-.+...+..+.+. .
T Consensus       101 ~~~~L~~~i~~lh~~~gna~t~~~~IvvG~Gsteli~~~~~AL~~~~~~~~~~pg~~Vv~~~P~y~~Y~~~~~~~~~~-~  179 (425)
T d2hoxa1         101 ISFELEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKK-G  179 (425)
T ss_dssp             CCHHHHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBT-T
T ss_pred             CCHHHHHHHHHHHhhhCCCCCCCCEEEECCCHHHHHHHHHHHhccccccccCCCCCEEEEecCccccHHHHHHHcCCC-C
Confidence            3467888887765   221  224699999999999999976621100000123478999999997764332222111 1


Q ss_pred             ccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHH
Q 010250          220 LHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQA  299 (514)
Q Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~  299 (514)
                      +                  .|..+             .+.+++.   ..++....+++.|.|++ |.+..          
T Consensus       180 ~------------------~~~~D-------------~~~~~~~---~~~~~~ii~l~sPnNPt-G~l~~----------  214 (425)
T d2hoxa1         180 Y------------------VWAGN-------------AANYVNV---SNPEQYIEMVTSPNNPE-GLLRH----------  214 (425)
T ss_dssp             E------------------EEEEE-------------GGGGTTC---SCGGGEEEEEESSCTTT-CCCCC----------
T ss_pred             C------------------ccCCC-------------HHHHHhh---CCCCceEEEEECCCCCC-cchhh----------
Confidence            0                  01100             1222222   22344556666776555 54422          


Q ss_pred             HHHhcCCEEEEechhcCcccccccceecccCC-CCchh--chhhhhcCCcccceeEEeC-HHHHHHhhhccCCCCccccc
Q 010250          300 VVKKYDILFIADEVICAFGRLGTMFGCDKYSI-KPDLV--SFAKALSSAYMPIGAILVS-PEVSEVIHSQSNTLGSFSHG  375 (514)
Q Consensus       300 l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv-~pDiv--~~sK~l~gG~~pig~v~~~-~~i~~~l~~~~~~~~~~~~~  375 (514)
                       +..+++.+|.||+|-+...+.    .  ... ..+|+  +|||.++-.++++|+++++ +.+++.+..       +...
T Consensus       215 -~v~~~~~~I~DEaY~~~~f~~----~--~~~~~~~Ivl~S~SK~fglaGlRiGw~i~~~~~i~~~~~~-------~~~~  280 (425)
T d2hoxa1         215 -AVIKGCKSIYDMVYYWPHYTP----I--KYKADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLN-------YMTK  280 (425)
T ss_dssp             -CSSTTCEEEEECTTCSTTTSC----C--CSCBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHH-------HHHH
T ss_pred             -hhhhCCEEEEeccccCccccc----h--hhhcCCeEEEEeCHHhccCcchheeeEEeCCHHHHHHHHH-------hhcc
Confidence             223689999999995431111    1  111 23444  6899776434999997664 667676653       1233


Q ss_pred             CCCCCcHHHHHHHHHHHHHHhh---------cc----HHHHHHHHHHHHHhhhhhccC-----CCc-------eeEEEee
Q 010250          376 FTYSGHPVSCAVAIEALKIYKE---------RN----IVEQVNKIAPKFQDGVKAFSD-----SPI-------IGEIRGT  430 (514)
Q Consensus       376 ~t~~~~pl~~aaa~aal~~~~~---------~~----~~~~~~~~~~~l~~~L~~l~~-----~~~-------~~~v~g~  430 (514)
                      .+++.+.+++.++.++|+....         .+    ..+.++++.+++++.|++...     .|.       .......
T Consensus       281 ~~~~vs~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~~~~~l~~~p~~~~~~f~~~~~~~~  360 (425)
T d2hoxa1         281 NTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPS  360 (425)
T ss_dssp             HTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCC
T ss_pred             CcccCCHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeccCCccceeeeeeccCCC
Confidence            4667777888888888864321         12    245566666777777766421     111       0122333


Q ss_pred             eeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee------CCEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          431 GLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS------GDNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       431 g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~------g~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      +.+.++.+.....            ..+.+.|.++||+++++      ++.+||+  +..++|++++++++|++.++
T Consensus       361 ~~f~wl~~~~~~~------------~~~~~lL~e~gI~v~pGs~FG~~~~yvRis--l~~~~e~ld~~l~rL~~~v~  423 (425)
T d2hoxa1         361 PSYAWVKCEWEED------------KDCYQTFQNGRINTQNGVGFEASSRYVRLS--LIKTQDDFDQLMYYLKDMVK  423 (425)
T ss_dssp             CSEEEEEECSGGG------------CSHHHHHHHTTEECEEGGGGTSCTTEEEEE--CSSCHHHHHHHHHHHHHHHT
T ss_pred             cceeeeeCCCChH------------HHHHHHHHhCCEEEEechhcCCCCCEEEEE--ecCCHHHHHHHHHHHHHHHh
Confidence            4455555532211            11346678999999974      2579999  78899999999999999875

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.44  E-value=4.2e-12  Score=126.51  Aligned_cols=315  Identities=13%  Similarity=0.116  Sum_probs=182.4

Q ss_pred             HHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEE
Q 010250          119 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI  198 (514)
Q Consensus       119 p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii  198 (514)
                      ++-++++.+.++.+.+.    .  -+...++++++++++   +.+.+++++|||.|+..|++...      . ..+++||
T Consensus        12 ~~~~~~~~~~~~~~~~~----~--G~~v~~~E~~la~~~---g~~~ai~~~sgt~Al~~al~al~------~-~~gdeVi   75 (376)
T d1mdoa_          12 AEELAAVKTVLDSGWIT----T--GPKNQELEAAFCRLT---GNQYAVAVSSATAGMHIALMALG------I-GEGDEVI   75 (376)
T ss_dssp             HHHHHHHHHHHHHTCCS----S--SHHHHHHHHHHHHHH---CCSEEEEESCHHHHHHHHHHHTT------C-CTTCEEE
T ss_pred             HHHHHHHHHHHhcCCCc----C--CHHHHHHHHHHHHHH---CcCeEEEeCCHHHHHHHHHHHhC------C-CCCCEEE
Confidence            56667888888765332    1  145678999999998   45689999999999999998641      1 3456888


Q ss_pred             EEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEc
Q 010250          199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAE  278 (514)
Q Consensus       199 ~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivE  278 (514)
                      +...+|+.........+..+.+..           +. ++.+.             .++++|++.+.    +++.+|++-
T Consensus        76 ~~~~~~~~~~~ai~~~g~~pv~~d-----------~~-~~~~~-------------~d~~~l~~~i~----~~tkaIi~~  126 (376)
T d1mdoa_          76 TPSMTWVSTLNMIVLLGANPVMVD-----------VD-RDTLM-------------VTPEHIEAAIT----PQTKAIIPV  126 (376)
T ss_dssp             EESSSCHHHHHHHHHTTCEEEEEC-----------BC-TTTCC-------------BCHHHHHHHCC----TTEEEECCB
T ss_pred             Eecccccccccchhccccceeeec-----------cc-ccccC-------------CCHHHHHHhcC----CCCeEEEEe
Confidence            888777665544444333332210           00 00000             11477777764    356777765


Q ss_pred             cccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhch--hhhhcCCcccceeEEeC-
Q 010250          279 PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF--AKALSSAYMPIGAILVS-  355 (514)
Q Consensus       279 pv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG~~pig~v~~~-  355 (514)
                      .+.   |...+    +++|.++|++||+.||.|.+|+ +|-.=.......+|.  .+.+|  .|.++.|  ..|+++.+ 
T Consensus       127 h~~---G~~~~----~~~i~~i~~~~~i~vIeD~a~a-~g~~~~~~~~g~~g~--~~~Sf~~~K~l~~g--~GG~i~t~~  194 (376)
T d1mdoa_         127 HYA---GAPAD----LDAIYALGERYGIPVIEDAAHA-TGTSYKGRHIGARGT--AIFSFHAIKNITCA--EGGIVVTDN  194 (376)
T ss_dssp             CGG---GCCCC----HHHHHHHHHHHTCCBCEECTTC-TTCEETTEETTSSSE--EEEECCTTSSSCSS--SCEEEEESC
T ss_pred             CCC---CCccc----hhHHHHHHHhcCceEEeccchh-ccCeeCCeecccccC--ccccCCCcCCCCCC--CCCEEEEec
Confidence            544   44454    8999999999999999999997 542200000111121  22333  3877764  23666665 


Q ss_pred             HHHHHHhhhccCCC-----------------CcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhc
Q 010250          356 PEVSEVIHSQSNTL-----------------GSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAF  418 (514)
Q Consensus       356 ~~i~~~l~~~~~~~-----------------~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l  418 (514)
                      +++.+.+..-...-                 .....+..+..+.+.++.+..-|+.++  ++.++.++..+++.+.|+.+
T Consensus       195 ~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aai~~~qL~~~~--~~~~~r~~~~~~~~~~L~~~  272 (376)
T d1mdoa_         195 PQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLD--ALNARRAAIAAQYHQAMADL  272 (376)
T ss_dssp             HHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHHHTS
T ss_pred             hhHHHHHHhhcccCCcccccccccccccccccchhcccccccchhhhhhhhhhhhhhh--HHHHHHhhhhhhhhhhcccc
Confidence            55655554311000                 001123444556777777777666553  45677788888888888775


Q ss_pred             cCC--Cce-eEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----------------------
Q 010250          419 SDS--PII-GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----------------------  472 (514)
Q Consensus       419 ~~~--~~~-~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----------------------  472 (514)
                      ...  +.. ......-..+.+.+......        ...+.+.+.|.++||-++..                       
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~Rd~l~~~L~~~gI~~~~~y~~~~~~~~~~~~~~~~~~p~a~  344 (376)
T d1mdoa_         273 PFQPLSLPSWEHIHAWHLFIIRVDEARCG--------ITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTE  344 (376)
T ss_dssp             SCEECCCCSSCEECCCSCEEEECCHHHHS--------SCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHH
T ss_pred             cccccccccccccccccccccccccccch--------hhHHHHHHHHHHCCCCeeeECcchhcCHHHHhhCCCCCCHHHH
Confidence            211  111 01111001111111110000        01245888999999876521                       


Q ss_pred             ---CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          473 ---GDNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       473 ---g~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                         .+.|.+-....+|++||+++++.|++.+
T Consensus       345 ~~~~~~i~LP~~~~lt~~ei~~I~~~i~~i~  375 (376)
T d1mdoa_         345 WNSERICSLPLFPDMTESDFDRVITALHQIA  375 (376)
T ss_dssp             HHHTTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred             HHHhCEEEccCCCCCCHHHHHHHHHHHHHHh
Confidence               1346664445679999999999998864

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.44  E-value=1.4e-11  Score=126.41  Aligned_cols=319  Identities=11%  Similarity=0.018  Sum_probs=183.4

Q ss_pred             chHHHHHHHHHHhcCcCC--------CCeEEEeCChhHHHHHHHHHHHHHHhhc----C--CC----CccEEEEEecCCc
Q 010250          144 KPSLDLAKELLEMFTASK--------MAKVFFTNSGSEANDTQVKLVWYYNNAL----G--RP----NKKKFIARQKSYH  205 (514)
Q Consensus       144 ~~~~ela~~L~~~~~~~~--------~~~v~~~~sGseA~~~Alk~a~~~~~~~----~--~~----~~~~ii~~~~~yH  205 (514)
                      ....+..+.|+++++...        -.--+++++||+||..|+.+||......    .  -.    .++-+++.+..-|
T Consensus       113 ~iE~~v~~wl~~l~g~p~~~~~~~~~~~~G~~~~Ggs~anl~al~~AR~~~~~~~~~~~~g~~~~~~~~~~vv~~s~~~H  192 (476)
T d1js3a_         113 ELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAH  192 (476)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCC
T ss_pred             HHHHHHHHHHHHHhCCCcccccCCCCCCCceECCcHHHHHHHHHHHHHHHHHHhhcccccCcccccccCceEEEeccccc
Confidence            344456667777764211        1246899999999999999997542111    0  00    1234666777777


Q ss_pred             ccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh--CCCcEEEEEEccccCC
Q 010250          206 GSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE--GPETIAAFIAEPVIGA  283 (514)
Q Consensus       206 G~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~--~~~~~aavivEpv~~~  283 (514)
                      -+...+....|...            ..+++.+.++.             +.++|++.+++.  ....+.+|+..-....
T Consensus       193 ~Si~ka~~~lGl~~------------~~v~~d~~~~m-------------d~~~L~~~i~~~~~~g~~p~~VvataGtt~  247 (476)
T d1js3a_         193 SSVERAGLIGGVKL------------KAIPSDGKFAM-------------RASALQEALERDKAAGLIPFFVVATLGTTS  247 (476)
T ss_dssp             HHHHHHHHHHTCEE------------EEECCCTTSCC-------------CHHHHHHHHHHHHHTTCEEEEEEEEBSCTT
T ss_pred             HHHHHHHHhcCceE------------EEeccCCCCCc-------------CHHHHHHHHHHHHhcCCCcEEEeecCCCcc
Confidence            76554444444321            12222222221             257888887653  2335666777666777


Q ss_pred             CCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCC-Cchhch--hhhhcCCcccceeEEeCHH-HH
Q 010250          284 GGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIK-PDLVSF--AKALSSAYMPIGAILVSPE-VS  359 (514)
Q Consensus       284 ~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~-pDiv~~--sK~l~gG~~pig~v~~~~~-i~  359 (514)
                      .|.+-|    |++|.++|++||++|++|-++.|+...-........|+. .|-+++  -|.+... ++.|+++.++. ..
T Consensus       248 ~G~iDp----l~~I~~i~~~~~~wlHVDAA~Gg~~~~~~~~~~~~~gi~~aDSit~d~HK~l~~P-~~~g~~l~r~~~~~  322 (476)
T d1js3a_         248 CCSFDN----LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVN-FDCSAMWVKRRTDL  322 (476)
T ss_dssp             TCCBCC----HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCC-SSCEEEEESCHHHH
T ss_pred             ceeecc----HHHHHHHHHhcCcEEEEecccchhhhhhcchhhhhcCCcccceeeecCccccccC-CcceeecccchHHH
Confidence            898888    999999999999999999999877433222222223443 677775  4988776 57888888753 22


Q ss_pred             -HHhhhccCCCCcc---------cccCCCC-CcHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHhhhhhccCCCcee
Q 010250          360 -EVIHSQSNTLGSF---------SHGFTYS-GHPVSCAVAIEALKIYKER---NIVEQVNKIAPKFQDGVKAFSDSPIIG  425 (514)
Q Consensus       360 -~~l~~~~~~~~~~---------~~~~t~~-~~pl~~aaa~aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~~~~~~~  425 (514)
                       ..+..........         ....|.. +-+........+++.+..+   ++.++.-++.++|.+.|++..+..++.
T Consensus       323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~G~~g~~~~i~~~~~lA~~l~~~l~~~~~fel~~  402 (476)
T d1js3a_         323 TGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCA  402 (476)
T ss_dssp             HGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECS
T ss_pred             HHHHhcChhhhccccccccccccccccccccchhhHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcCCCeEEEC
Confidence             2221110000000         0001111 1122222344556655544   345666777888888887753222211


Q ss_pred             EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCC-cEEEe---eCC-EEEEeCC-CCCCHHHHHHHHHHHHHH
Q 010250          426 EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHG-MLVRV---SGD-NIMMSPP-FIMSPEEVDELISKYGKA  499 (514)
Q Consensus       426 ~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-v~~~~---~g~-~iRi~p~-~~~t~e~id~~~~~l~~~  499 (514)
                      .  ..-.++.|.+.+..          .....+.+++.+.| +++.+   .|. .||++.. ...|++||+.+++.|++.
T Consensus       403 ~--p~l~iV~Fr~~~~d----------~~n~~l~~~l~~~G~~~~s~t~~~g~~~lR~~i~n~~Tt~~did~~~~~i~~~  470 (476)
T d1js3a_         403 E--VTLGLVCFRLKGSD----------GLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHIRGL  470 (476)
T ss_dssp             C--CCSSEEEEEESSCH----------HHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred             C--CceEEEEEEccCCh----------HHHHHHHHHHHhcCCEEEeeeeECCEEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence            1  12223445543211          13456778888887 33432   233 4999865 567899999999999999


Q ss_pred             HHHHH
Q 010250          500 LKATE  504 (514)
Q Consensus       500 l~~~~  504 (514)
                      .+++.
T Consensus       471 a~~ll  475 (476)
T d1js3a_         471 AAELL  475 (476)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            87763

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.31  E-value=9.5e-11  Score=117.10  Aligned_cols=317  Identities=10%  Similarity=0.090  Sum_probs=184.0

Q ss_pred             HHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEE
Q 010250          119 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI  198 (514)
Q Consensus       119 p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii  198 (514)
                      .+-.+++.+.++.+....    ..-+...++++++++++   +.+.+++++|||.|+..|++.+       +-+.+++||
T Consensus        13 ~~~~~~~~~~l~~g~~~~----~~g~~v~~fE~~~a~~~---g~~~~v~~~SGt~Al~lal~~l-------~~~~gdeVi   78 (384)
T d1b9ha_          13 DAERNGLVRALEQGQWWR----MGGDEVNSFEREFAAHH---GAAHALAVTNGTHALELALQVM-------GVGPGTEVI   78 (384)
T ss_dssp             HHHHHHHHHHHHTSCCBT----TTCSHHHHHHHHHHHHT---TCSEEEEESCHHHHHHHHHHHT-------TCCTTCEEE
T ss_pred             HHHHHHHHHHHHcCCeee----cCCHHHHHHHHHHHHHH---CcCeEEEeCCHHHHHHHHHHHc-------CCCCCCEEE
Confidence            456788899998763321    12245688999999997   5578999999999999999864       113456898


Q ss_pred             EEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEc
Q 010250          199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAE  278 (514)
Q Consensus       199 ~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivE  278 (514)
                      +..-+|..........+..+.+..           +. +..+.             .+.+++++.+.    .++.+|++.
T Consensus        79 ~p~~t~~a~~~ai~~~g~~p~~~d-----------~~-~~~~~-------------~d~~~~~~~i~----~~tk~i~~~  129 (384)
T d1b9ha_          79 VPAFTFISSSQAAQRLGAVTVPVD-----------VD-AATYN-------------LDPEAVAAAVT----PRTKVIMPV  129 (384)
T ss_dssp             EESSSCTHHHHHHHHTTCEEEEEC-----------BC-TTTCC-------------BCHHHHHHHCC----TTEEEECCB
T ss_pred             Eecccccccccccccccccccccc-----------cc-ccccc-------------cchhhhccccc----ccccccccc
Confidence            888777654433333333222110           00 00000             01355665543    567788776


Q ss_pred             cccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhch----hhhhcCCcccceeEEe
Q 010250          279 PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSF----AKALSSAYMPIGAILV  354 (514)
Q Consensus       279 pv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~----sK~l~gG~~pig~v~~  354 (514)
                      ...|.   ...    +.++.++|+++|+.+|-|-+|+ +|-.-.   -...|-.-|+.++    .|.++.|.  -|++++
T Consensus       130 ~~~g~---~~d----~~~i~~~~~~~~i~lieD~a~a-~ga~~~---g~~~g~~g~~~~~Sf~~~K~i~~g~--GG~i~t  196 (384)
T d1b9ha_         130 HMAGL---MAD----MDALAKISADTGVPLLQDAAHA-HGARWQ---GKRVGELDSIATFSFQNGKLMTAGE--GGAVVF  196 (384)
T ss_dssp             CGGGC---CCC----HHHHHHHHHHHTCCBCEECTTC-TTCEET---TEEGGGSSSCEEEECCTTSSSCSSS--CEEEEE
T ss_pred             ccccc---ccc----cccchhhhhhhhhhhhhhhcee-cccccC---CEecCcccccceecccccccccccc--cchhhh
Confidence            66653   333    8899999999999999999997 432211   1112223355543    48876642  366666


Q ss_pred             C-HHHHHHhhh---ccC-------CCCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCC-C
Q 010250          355 S-PEVSEVIHS---QSN-------TLGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDS-P  422 (514)
Q Consensus       355 ~-~~i~~~l~~---~~~-------~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~-~  422 (514)
                      + +++.+.+..   .+.       .......|+.+-.+++.++.++..|+.++  +..++-+++.+++.+.|+.+... +
T Consensus       197 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~n~rms~l~Aaig~~qL~~ld--~~~~~R~~~~~~y~~~L~~~~~i~~  274 (384)
T d1b9ha_         197 PDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLD--EQIAVRDERWTLLSRLLGAIDGVVP  274 (384)
T ss_dssp             CTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHHTSTTCEE
T ss_pred             hhHHHHHHHHHHHhcCCCCccccccccccccccccccccchhhhhhhhhhhcc--cchhhhhhhhhhhhhhhhccccccc
Confidence            4 555544422   110       00011234555667888888887777554  34566667777777777765221 0


Q ss_pred             ceeE--E-EeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC--------------------------
Q 010250          423 IIGE--I-RGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG--------------------------  473 (514)
Q Consensus       423 ~~~~--v-~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--------------------------  473 (514)
                      ....  . .....+..+.+....         ....+.+.+.|.++||-++..-                          
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~Rd~l~~~L~~~GI~~~~~y~plh~~~~~~~~~~~~~~~~~~~~~~  345 (384)
T d1b9ha_         275 QGGDVRADRNSHYMAMFRIPGLT---------EERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRC  345 (384)
T ss_dssp             CCCCTTCCBCCCSEEEEECTTCC---------HHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTC
T ss_pred             ccccccccccccccccceecccc---------cccHHHHHHHHHHCCCCeeeeCcchhcCHHHHhcCCCcccccccccCC
Confidence            0000  0 011112222222111         0113468899999999876310                          


Q ss_pred             --------CEEEEeCCCCCC-HHHHHHHHHHHHHHHHH
Q 010250          474 --------DNIMMSPPFIMS-PEEVDELISKYGKALKA  502 (514)
Q Consensus       474 --------~~iRi~p~~~~t-~e~id~~~~~l~~~l~~  502 (514)
                              +.|.|-....+| ++||+..+++|++++++
T Consensus       346 Pna~~l~~~~l~LP~~~~Lt~e~ei~~I~~~i~~~l~~  383 (384)
T d1b9ha_         346 PNTDAISSDCVWLHHRVLLAGEPELHATAEIIADAVAR  383 (384)
T ss_dssp             HHHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCEEEccCCCCCCCHHHHHHHHHHHHHHHhh
Confidence                    234444334556 67999999999998864

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.26  E-value=3e-10  Score=112.53  Aligned_cols=238  Identities=16%  Similarity=0.162  Sum_probs=145.9

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      ++....|+++|+++-   +-+.++.++||..|+.+++....        +.++.||..+..|+|........      ..
T Consensus        66 nPt~~~LE~~la~LE---gg~~a~~~sSGMaAi~~~l~~l~--------~~Gd~iv~~~~~Yg~t~~l~~~~------~~  128 (398)
T d1qgna_          66 NPTTVVLEEKISALE---GAESTLLMASGMCASTVMLLALV--------PAGGHIVTTTDCYRKTRIFIETI------LP  128 (398)
T ss_dssp             CHHHHHHHHHHHHHH---TCSEEEEESCHHHHHHHHHHHHS--------CSSCEEEEETTSCHHHHHHHHHT------GG
T ss_pred             ChHHHHHHHHHHHHh---CCceEEEecCcchHHHHHHhhcc--------cccccccccccccchhhhhhccc------cc
Confidence            455678999999985   34679999999999999987553        45678999998997753221110      01


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++..   +..++..          +        .++.++.+.   .+++.+|++|.+-+....+++    +++|.++|+
T Consensus       129 ~~gi~---~~~~~~~----------~--------~~~~~~~~~---~~~t~~v~~EspsNP~l~v~D----i~~ia~ia~  180 (398)
T d1qgna_         129 KMGIT---ATVIDPA----------D--------VGALELALN---QKKVNLFFTESPTNPFLRCVD----IELVSKLCH  180 (398)
T ss_dssp             GGTCE---EEEECSS----------C--------HHHHHHHHH---HSCEEEEEEESSCTTTCCCCC----HHHHHHHHH
T ss_pred             ccccc---ccccccc----------c--------hhhhhhhhc---cccceEEEccCccccccccch----HHHHHHHHh
Confidence            11110   0001100          0        122222222   157889999999998887776    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcC-CcccceeEEeCHHHHHHhhhccCCCCcccccCCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSS-AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS  379 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~g-G~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~  379 (514)
                      ++|+++|+|...+.      +..+..+..-.|||+  +.|-++| +-.-.|++..+++++..+....     ...|.  .
T Consensus       181 ~~g~~~vVDnT~at------P~~~~Pl~~GaDiVihS~TKy~~Ghsdv~~G~v~~~~~~~~~~~~~~-----~~~G~--~  247 (398)
T d1qgna_         181 EKGALVCIDGTFAT------PLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRNLH-----HILGG--A  247 (398)
T ss_dssp             HTTCEEEEECTTTC------TTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHHHH-----HHHCC--C
T ss_pred             hcCCEEEecceeec------cccCCchhhCCCEEEEechhhcCcccceeehhhcchhhhhhhhhhhc-----ccCCC--c
Confidence            99999999998642      233444555578875  6698887 2244567778888877765311     11222  3


Q ss_pred             CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250          380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD  440 (514)
Q Consensus       380 ~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~  440 (514)
                      .+|..+...+..|+.+..  ..++..+++..+.+.|++.+     .+|...          ...|.|.++.|++..
T Consensus       248 l~p~~a~ll~rgl~TL~l--Rm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~~~~~~~~~~g~g~~~sf~~~g  321 (398)
T d1qgna_         248 LNPNAAYLIIRGMKTLHL--RVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDG  321 (398)
T ss_dssp             CCHHHHHHHHHHGGGHHH--HHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESS
T ss_pred             CCHHHHHHHHhcchHHHH--HHHHHHHHHHHHHHHHHhCCCeeecCCCCCCCCcchhhhhhhcCCCCceeeeeecC
Confidence            467777776666654432  23444555555555554421     122211          134557788887753

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.25  E-value=1.3e-10  Score=114.89  Aligned_cols=216  Identities=13%  Similarity=0.093  Sum_probs=138.7

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      ++....|+++|+++-   +-+.++.++||..|+.+++....        ...++||+.+..|+|........      ..
T Consensus        58 nPT~~~LE~~la~LE---g~~~a~~~~SGmaAi~~~l~~l~--------~~Gd~vl~~~~~Yg~t~~l~~~~------~~  120 (392)
T d1gc0a_          58 NPTLNLLEARMASLE---GGEAGLALASGMGAITSTLWTLL--------RPGDEVLLGNTLYGCTFAFLHHG------IG  120 (392)
T ss_dssp             CHHHHHHHHHHHHHH---TCSEEEEESSHHHHHHHHHHHHC--------CTTCEEEEESSCCSHHHHHHHHT------GG
T ss_pred             ChHHHHHHHHHHHHh---CCcceeehhhHHHHHHHHHHhhc--------cCCCeeecccccchhhhhhhhhh------hc
Confidence            355678999999986   34678999999999999887653        34579999999998864221110      01


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .+++...   .++..                  +.+++++.+.    +++.+|++|.+.+....+++    +++|+++|+
T Consensus       121 ~~Gi~~~---~~d~~------------------d~~~~~~ai~----~~t~lv~~Esp~NP~l~v~D----i~~i~~ia~  171 (392)
T d1gc0a_         121 EFGVKLR---HVDMA------------------DLQALEAAMT----PATRVIYFESPANPNMHMAD----IAGVAKIAR  171 (392)
T ss_dssp             GGTCEEE---EECTT------------------CHHHHHHHCC----TTEEEEEEESSCTTTCCCCC----HHHHHHHHG
T ss_pred             cCCcccc---cCCcc------------------CHHHHHHhCC----CCCeEEEecccccceeeecc----hHHHHHHHH
Confidence            1121111   11110                  1356666654    57899999999999988887    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcC-CcccceeEEeCHHHHHHhhhccCCCCcccccCCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSS-AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS  379 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~g-G~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~  379 (514)
                      ++|+++|+|...+.      +..+..+..-.||++  ..|-++| +-.-.|+++++++.+..++-.     .........
T Consensus       172 ~~g~~~vvDnT~at------P~~~~Pl~~GaDivihS~TKyi~Ghsd~~~G~v~~~~~~~~~~r~~-----~~~~~~G~~  240 (392)
T d1gc0a_         172 KHGATVVVDNTYCT------PYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQ-----GLKDMTGAV  240 (392)
T ss_dssp             GGTCEEEEECTTTH------HHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHT-----HHHHHTCCC
T ss_pred             hcCCEEEEecCccC------ccccChHHhCCCEEEEecceeecCCcccccccccchhHHHHHHHHH-----HHHHccCCc
Confidence            99999999998752      123344444568875  5698887 324456778888877654310     111111223


Q ss_pred             CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhh
Q 010250          380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA  417 (514)
Q Consensus       380 ~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~  417 (514)
                      .+|..|...+..|+.+..  ..++..+++..+.+.|++
T Consensus       241 ~~p~da~ll~rgl~TL~l--Rm~~~~~nA~~lA~~L~~  276 (392)
T d1gc0a_         241 LSPHDAALLMRGIKTLNL--RMDRHCANAQVLAEFLAR  276 (392)
T ss_dssp             CCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHT
T ss_pred             CChhhHHHHHhccccHHH--HHHHHHHHHHHHHHHHHh
Confidence            457777777776665532  244455555555555544

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.25  E-value=1.3e-09  Score=108.06  Aligned_cols=323  Identities=13%  Similarity=0.127  Sum_probs=178.6

Q ss_pred             HHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEe
Q 010250          122 VAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQ  201 (514)
Q Consensus       122 ~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~  201 (514)
                      ++++.+.++......     .-+...++++++++.+   +.+.+++++|||.|+..|++.+-       -.++++||+..
T Consensus         4 ~~~~~~~l~~~~~~~-----~G~~~~~fE~~~~~~~---~~~~~~~~~SgT~Al~lal~~l~-------~~~gdeVi~p~   68 (374)
T d1o69a_           4 LKYIEEVFKSNYIAP-----LGEFVNRFEQSVKDYS---KSENALALNSATAALHLALRVAG-------VKQDDIVLASS   68 (374)
T ss_dssp             HHHHHHHHHHTTTSC-----TTHHHHHHHHHHHHHH---CCSEEEEESCHHHHHHHHHHHTT-------CCTTCEEEEES
T ss_pred             HHHHHHHHhcCCcCC-----CCHHHHHHHHHHHHHH---CcCeEEEeCCHHHHHHHHHHHcC-------CCCcCEEEeCC
Confidence            467777777642210     1144678999999998   45689999999999999998651       13456898887


Q ss_pred             cCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEcccc
Q 010250          202 KSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVI  281 (514)
Q Consensus       202 ~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~  281 (514)
                      -+|..........+..|.+-           .++ ++.+.        .      ..+.+.......+ ++.++++-...
T Consensus        69 ~t~~a~~~~~~~~g~~pv~~-----------Di~-~~~~~--------~------~~~~~~~~~~~~~-~~~aii~~~~~  121 (374)
T d1o69a_          69 FTFIASVAPICYLKAKPVFI-----------DCD-ETYNI--------D------VDLLKLAIKECEK-KPKALILTHLY  121 (374)
T ss_dssp             SSCGGGTHHHHHTTCEEEEE-----------CBC-TTSSB--------C------HHHHHHHHHHCSS-CCCEEEEECGG
T ss_pred             cchHhhHHHHhhccceeEec-----------ccc-ccccc--------c------cccccccchhccc-ccccccccccc
Confidence            77755433333332222211           010 00000        0      1222222233333 34455554444


Q ss_pred             CCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh----hhhcCCcccceeEEe-CH
Q 010250          282 GAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAILV-SP  356 (514)
Q Consensus       282 ~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s----K~l~gG~~pig~v~~-~~  356 (514)
                      |   ....    +++|.++|+++|+.||-|-+|+ ||-.   +.-...|-.-|+.+||    |.++.|.  -|+++. ++
T Consensus       122 G---~~~d----~~~i~~~~~~~~i~vIED~a~a-~g~~---~~~~~~G~~gd~~~fSf~~~K~l~tge--GG~i~tnn~  188 (374)
T d1o69a_         122 G---NAAK----MDEIVEICKENDIVLIEDAAEA-LGSF---YKNKALGTFGEFGVYSYNGNKIITTSG--GGMLIGKNK  188 (374)
T ss_dssp             G---CCCC----HHHHHHHHHHTTCEEEEECTTC-TTCE---ETTEETTSSSSEEEEECCTTSSSCCSS--CEEEEESCH
T ss_pred             c---chhh----hHHHHHHhhccCcchhhhhhhh-hcce---ECCeecCCCCceEEEeccCcccccccc--ceeehhhhH
Confidence            3   2333    8999999999999999999998 5321   1111223334777665    8776542  255555 56


Q ss_pred             HHHHHhhhccCC-------CCcccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-CCceeEEE
Q 010250          357 EVSEVIHSQSNT-------LGSFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-SPIIGEIR  428 (514)
Q Consensus       357 ~i~~~l~~~~~~-------~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-~~~~~~v~  428 (514)
                      ++++.+......       ......|+.+-.+.+.++.+++-|+.+.  ++.++-++..+++.+.|++... .+......
T Consensus       189 ~~~~~~~~~~~~g~~~~~~~~~~~~G~N~rm~ei~Aaig~~qL~~l~--~~i~~r~~i~~~y~~~L~~~~~~~~~~~~~~  266 (374)
T d1o69a_         189 EKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLE--QRVLKKREIYEWYKEFLGEYFSFLDELENSR  266 (374)
T ss_dssp             HHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHTTTEECCCCCTTEE
T ss_pred             HHHHhhccccccccccccccccccCCccccccchhhhhhHHHHhhhh--hhcchhHHHHHHHHhhccccccccccccCCC
Confidence            777666432110       0011234556677888888888877664  3455566677777777766421 11111111


Q ss_pred             eeeeeEEEEEccCCCCCCCC----------CCccchHHHHHHHHHHCCcEEEee------------------C-------
Q 010250          429 GTGLILGTEFADNKSPNEPF----------PPEWGIGAYFGAQCEKHGMLVRVS------------------G-------  473 (514)
Q Consensus       429 g~g~~~~i~~~~~~~~~~~~----------~~~~~~~~~~~~~l~~~Gv~~~~~------------------g-------  473 (514)
                      ....+..+.+..+.......          .........+.+.|.++||-+++.                  .       
T Consensus       267 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~~r~~y~pl~~~~~~~~~~~~~~pna~~~~~  346 (374)
T d1o69a_         267 SNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQ  346 (374)
T ss_dssp             CCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHH
T ss_pred             CChhheeeeeccccccccccccccccchhhccchhhHHHHHHHHHHCCCCEEEeCcchhhChhhhcCCCCCCHHHHHHHh
Confidence            11111122221111000000          001112456889999999876521                  0       


Q ss_pred             CEEEEeCCCCCCHHHHHHHHHHHHHHHH
Q 010250          474 DNIMMSPPFIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       474 ~~iRi~p~~~~t~e~id~~~~~l~~~l~  501 (514)
                      ..|.+-....+|++||+..++.|.++++
T Consensus       347 ~~i~LP~~~~lt~~di~~I~~~I~~~lk  374 (374)
T d1o69a_         347 KGICLPSGTAMSKDDVYEISKLILKSIK  374 (374)
T ss_dssp             HEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred             CEEECcCCCCCCHHHHHHHHHHHHHHHC
Confidence            1233322345799999999999998763

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.22  E-value=3.7e-10  Score=112.14  Aligned_cols=316  Identities=16%  Similarity=0.113  Sum_probs=181.7

Q ss_pred             HHHHHHHHHHHhcCCccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEE
Q 010250          119 PRLVAAATAQLNTLPFYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFI  198 (514)
Q Consensus       119 p~v~~A~~~~l~~~~~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii  198 (514)
                      .+-.+++.+.++...+.      .-+...++++++++++   +.+.+++++|||.|+..|++...     ....+++.||
T Consensus        12 ~~~~~~v~~~l~~~~~~------~G~~v~~fE~~~~~~~---g~k~ai~~~Sgt~Al~~al~al~-----~~~~~~~eVi   77 (371)
T d2fnua1          12 KEDKKAVLEVLNSKQLT------QGKRSLLFEEALCEFL---GVKHALVFNSATSALLTLYRNFS-----EFSADRNEII   77 (371)
T ss_dssp             HHHHHHHHHHHTSSCCS------SSHHHHHHHHHHHHHH---TCSEEEEESCHHHHHHHHHHHSS-----CCCTTSCEEE
T ss_pred             HHHHHHHHHHHcCCCcc------CCHHHHHHHHHHHHHH---CcCeEEEEecHHHHHHHHHHHhc-----ccCCCCCeee
Confidence            45567888888764322      1245678999999998   55689999999999999998652     1112345788


Q ss_pred             EEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEc
Q 010250          199 ARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAE  278 (514)
Q Consensus       199 ~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivE  278 (514)
                      +..-+|.......+..+..|.+.             +......     .        +.+++++   ... .++.+|++-
T Consensus        78 ~p~~t~~a~~~ai~~~G~~pv~v-------------Di~~~~~-----~--------~~~~~~~---~~~-~~t~avi~v  127 (371)
T d2fnua1          78 TTPISFVATANMLLESGYTPVFA-------------GIKNDGN-----I--------DELALEK---LIN-ERTKAIVSV  127 (371)
T ss_dssp             ECSSSCTHHHHHHHHTTCEEEEC-------------CBCTTSS-----B--------CGGGSGG---GCC-TTEEEEEEE
T ss_pred             cccccccccceeeeccCcccccc-------------ccccccc-----c--------cchhhhh---hcc-chhhccccc
Confidence            87766655433333333333221             1000000     0        0122222   222 456666655


Q ss_pred             cccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchh----hhhcCCcccceeEEe
Q 010250          279 PVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFA----KALSSAYMPIGAILV  354 (514)
Q Consensus       279 pv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~s----K~l~gG~~pig~v~~  354 (514)
                      ...|   ..++    +++|.++|+++|+.+|-|-+|+ +|-.   +.-...|-.-|+.++|    |.++.|.  -|+++.
T Consensus       128 h~~G---~~~~----~~~i~~~~~~~~i~lIEDaaqa-~Ga~---~~~~~~G~~g~~~~~Sf~~~K~l~~g~--GG~i~t  194 (371)
T d2fnua1         128 DYAG---KSVE----VESVQKLCKKHSLSFLSDSSHA-LGSE---YQNKKVGGFALASVFSFHAIKPITTAE--GGAVVT  194 (371)
T ss_dssp             CGGG---CCCC----HHHHHHHHHHHTCEEEEECTTC-TTCE---ETTEETTSSSSEEEEECCTTSSSCCSS--CEEEEE
T ss_pred             cccc---cccc----cccccccccccchhhccchhhc-cCce---eccccCCcccccccccccccccccccc--ceEEEe
Confidence            5554   3444    8999999999999999999998 5321   1122234445665554    8777652  366666


Q ss_pred             C-HHHHHHhhhccCCCC---------cccccCCCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCce
Q 010250          355 S-PEVSEVIHSQSNTLG---------SFSHGFTYSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPII  424 (514)
Q Consensus       355 ~-~~i~~~l~~~~~~~~---------~~~~~~t~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~  424 (514)
                      + +++.+.+......-.         ....|+.+-.+.+.++.++.-|+.++  ++.++-+++.+++.+.|+.+......
T Consensus       195 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~G~n~r~sel~Aaigl~qL~~l~--~~~~~R~~~~~~y~~~l~~~~~~~~~  272 (371)
T d2fnua1         195 NDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKAP--FLMQKREEAALTYDRIFKDNPYFTPL  272 (371)
T ss_dssp             SCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHTTCSSEEES
T ss_pred             echhhhhhcccccccccccccccccccccccccccccchhhhhhhhhhhhcc--chhhhhhhhhhhhccccccccccccc
Confidence            4 567666654211000         01124555667888888888777654  34555566666777777654110000


Q ss_pred             ---eEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----------------C----------CE
Q 010250          425 ---GEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------------G----------DN  475 (514)
Q Consensus       425 ---~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------------g----------~~  475 (514)
                         .........+.+.+.....         ...+.+.+.|.++||-+++.                +          ..
T Consensus       273 ~~~~~~~~~~~~~~i~~~~~~~---------~~r~~~~~~L~~~gI~~~~~y~pl~~~~~~~~~~~~~~~pnae~~~~~~  343 (371)
T d2fnua1         273 HPLLKDKSSNHLYPILMHQKFF---------TCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAE  343 (371)
T ss_dssp             GGGCSSCCCCSCEEEEECGGGG---------GGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHE
T ss_pred             ccccccccccccccccccccch---------hHHHHHHHHHHHCCCCcceeCcccccCHHHHhccccCCCHHHHHHHhCe
Confidence               0001111223333332110         11356888999999877521                1          23


Q ss_pred             EEEeCCCCCCHHHHHHHHHHHHHHHHH
Q 010250          476 IMMSPPFIMSPEEVDELISKYGKALKA  502 (514)
Q Consensus       476 iRi~p~~~~t~e~id~~~~~l~~~l~~  502 (514)
                      |.+-....+|++|++.+++.|.+.+++
T Consensus       344 l~LP~~~~lt~~di~~I~~~i~~~~~~  370 (371)
T d2fnua1         344 ISLPCHANLNLESVQNIAHSVLKTFES  370 (371)
T ss_dssp             EEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred             EECcCCCCCCHHHHHHHHHHHHHHHHc
Confidence            554333456999999999999998875

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.19  E-value=1.4e-10  Score=114.47  Aligned_cols=213  Identities=16%  Similarity=0.160  Sum_probs=128.4

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      ++....|+++|+++-   +-+.++.++||..|+. |+..+       . ...++||+.+..|.|.. .....     ...
T Consensus        48 nPt~~~le~~la~LE---~~~~a~~fsSGMaAis-all~l-------l-~~Gd~vv~~~~~Yg~t~-~l~~~-----~~~  109 (380)
T d1ibja_          48 NPTRDALESLLAKLD---KADRAFCFTSGMAALS-AVTHL-------I-KNGEEIVAGDDVYGGSD-RLLSQ-----VVP  109 (380)
T ss_dssp             CHHHHHHHHHHHHHH---TCSEEEEESSHHHHHH-HHHTT-------S-CTTCEEEEESSCCHHHH-HHHHH-----TSG
T ss_pred             ChHHHHHHHHHHHHc---CCceEEehhhHHHHHH-HHHHh-------h-CCCCEEEEEeccccccc-chhhh-----hhc
Confidence            455678999999885   3467899999999985 44222       1 33567888777775542 11110     001


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++..   +..++..                  +.+++++.+.    +++.+|++|.+.+....+++    +++|+++|+
T Consensus       110 ~~gi~---~~~~d~~------------------~~~~~~~ai~----~~t~li~~EtpsNP~l~v~D----i~~i~~iA~  160 (380)
T d1ibja_         110 RSGVV---VKRVNTT------------------KLDEVAAAIG----PQTKLVWLESPTNPRQQISD----IRKISEMAH  160 (380)
T ss_dssp             GGTCE---EEEECTT------------------SHHHHHHHCC----SSEEEEEECSSCTTTCCCCC----HHHHHHHHH
T ss_pred             ccccc---ccccCcc------------------hHHHHHHHhc----cCccEEEecccccccccccc----HHHHHHHHH
Confidence            11111   0001100                  1355555553    57899999999999888877    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCc-ccceeEEeC-HHHHHHhhhccCCCCcccccCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAY-MPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTY  378 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~-~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~  378 (514)
                      ++|+++|+|....+.      ..+.......|+|+  +.|-++|.. .-.|+++.+ +++.+.+...     ....|  -
T Consensus       161 ~~g~~~vVDnT~atP------~~~~Pl~~GaDiVvhS~TKyi~GhsDv~~G~v~~~~~~~~~~~~~~-----~~~~G--~  227 (380)
T d1ibja_         161 AQGALVLVDNSIMSP------VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFL-----QNSEG--S  227 (380)
T ss_dssp             TTTCEEEEECTTTCT------TTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHH-----HHHTT--C
T ss_pred             HcCCeEEeecccccc------ccccccccCCCEEEecccceeccccCccccccccchhhHHHHHHhh-----ccccC--C
Confidence            999999999987532      23344444568875  569888832 234555555 5566655431     01122  2


Q ss_pred             CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhh
Q 010250          379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA  417 (514)
Q Consensus       379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~  417 (514)
                      ..+|..+...+..|+.+..  ..++..+++..+.+.|++
T Consensus       228 ~l~p~~a~ll~rgl~Tl~l--Rm~~~~~nA~~lA~~L~~  264 (380)
T d1ibja_         228 GLAPFDCWLCLRGIKTMAL--RIEKQQENARKIAMYLSS  264 (380)
T ss_dssp             BCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHhcchhhhh--hHHHHHHHHHHHHHHHHh
Confidence            2457777777666665432  245555556666666654

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.18  E-value=8.2e-10  Score=109.16  Aligned_cols=239  Identities=15%  Similarity=0.132  Sum_probs=146.7

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      ++....|++.|+++-   +-+..+.++||..|+.+++....        ...++||+.+..|.|.......      ...
T Consensus        62 nPT~~~LE~~la~LE---gg~~a~~~sSGmaAi~~~l~~ll--------~~Gd~vi~~~~~Yg~t~~~~~~------~l~  124 (397)
T d1y4ia1          62 NPTTDALEKKLAVLE---RGEAGLATASGISAITTTLLTLC--------QQGDHIVSASAIYGCTHAFLSH------SMP  124 (397)
T ss_dssp             CHHHHHHHHHHHHHH---TCSEEEEESSHHHHHHHHHHHHC--------CTTCEEEEESSSCHHHHHHHHT------HHH
T ss_pred             CHHHHHHHHHHHHHh---CCccceeehHHHHHHHHHHhhcc--------CCCCeeeeecccccccchhhhc------ccC
Confidence            456678999999985   33578999999999998886553        3457899999999775321110      001


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .+++...++   +.                  .+.+.+++.+.    +++++|++|.+-+....+..    +++|.++|+
T Consensus       125 ~~Gi~~~~v---d~------------------~d~~~~~~~i~----~~Tklv~~Esp~NP~l~v~D----i~~i~~iA~  175 (397)
T d1y4ia1         125 KFGINVRFV---DA------------------GKPEEIRAAMR----PETKVVYIETPANPTLSLVD----IETVAGIAH  175 (397)
T ss_dssp             HTTCEEEEE---CT------------------TSHHHHHHHCC----TTEEEEEEESSCTTTCCCCC----HHHHHHHHH
T ss_pred             CCceEeecc---CC------------------CCHHHHHHhcC----CCCcEEEecCCcccceeecc----cHHHHHHhh
Confidence            112111111   10                  01356666653    57899999999888877777    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCc-ccceeEEeCHHHHHHhhhccCCCCcccccCCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAY-MPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYS  379 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~-~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~  379 (514)
                      ++|+++|+|-....      ++.++....-.||++  +.|-++|.. .-.|+++++++.+...+-.     .......-.
T Consensus       176 ~~gi~~vvDnT~at------P~~~~Pl~~GaDivihS~TKyi~Ghsdvl~G~v~~~~~~~~~~r~~-----~~~~~~G~~  244 (397)
T d1y4ia1         176 QQGALLVVDNTFMS------PYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFV-----GLKDITGGC  244 (397)
T ss_dssp             HTTCEEEEECTTTC------TTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHT-----HHHHTTCCC
T ss_pred             cCCceEEecCcccC------cccCcchhcCCCEEEEehhhhcCCCcceeeeccCCCHHHHHHHHHH-----HHHhCcCCc
Confidence            99999999998652      233444444468775  569888732 3356777888776554210     111111223


Q ss_pred             CcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhcc-----CCCcee----------EEEeeeeeEEEEEcc
Q 010250          380 GHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFS-----DSPIIG----------EIRGTGLILGTEFAD  440 (514)
Q Consensus       380 ~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----~~~~~~----------~v~g~g~~~~i~~~~  440 (514)
                      .+|..|-.++..|+.+.-  ..++..+++..+.+.|++.+     .+|...          ...+.|.++.|++..
T Consensus       245 l~p~~a~l~~rgl~TL~l--Rm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~h~~~~~~~~g~gg~~sf~~~~  318 (397)
T d1y4ia1         245 MSPFNAWLTLRGVKTLGI--RMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAG  318 (397)
T ss_dssp             CCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHCSSCCSEEEEEETT
T ss_pred             CCHHHHHHHHcCcCcHHH--HHHHHHHHHHHHHHHHHhCCCcCeEeCCCCCCCccccccccccCCCCeEEEEEecC
Confidence            457777777666665432  13445555555666665421     122111          133457788888754

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.18  E-value=2.5e-10  Score=112.60  Aligned_cols=234  Identities=17%  Similarity=0.179  Sum_probs=142.0

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      ++....|+++|+++-   +-+.++.++||..|+.+++....        ..++.||+.+..|.|........      ..
T Consensus        49 nPt~~~le~~la~LE---gg~~a~~~sSGMaAi~~~l~~l~--------~~gd~vv~~~~~yg~t~~~~~~~------~~  111 (384)
T d1cs1a_          49 NPTRDVVQRALAELE---GGAGAVLTNTGMSAIHLVTTVFL--------KPGDLLVAPHDCYGGSYRLFDSL------AK  111 (384)
T ss_dssp             CHHHHHHHHHHHHHH---TCSEEEEESSHHHHHHHHHHHHC--------CTTCEEEEETTCCHHHHHHHHHH------HT
T ss_pred             CHHHHHHHHHHHHHh---CCCceEEecChHHHHHHHHhhcc--------cccceecccccccchhhhhhhhh------hc
Confidence            455678999999985   34679999999999999987653        34567888777776642211110      00


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++..   +..++.                  .+.+.+++.+.    +++.+|++|.+-+....+++    +++|+++|+
T Consensus       112 ~~g~~---~~~~d~------------------~d~~~~~~~~~----~~t~~v~~EspsNP~l~v~D----i~~i~~ia~  162 (384)
T d1cs1a_         112 RGCYR---VLFVDQ------------------GDEQALRAALA----EKPKLVLVESPSNPLLRVVD----IAKICHLAR  162 (384)
T ss_dssp             TTSCE---EEEECT------------------TCHHHHHHHHH----TCCSEEEEECSCTTTCCCCC----HHHHHHHHH
T ss_pred             ccccc---cccccC------------------CCHHHHHhhcc----ccccEEEEeccccccceecc----HHHHhhhhh
Confidence            11100   000000                  01355666665    46679999999988877777    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCCc-ccceeEEeC-HHHHHHhhhccCCCCcccccCCC
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSAY-MPIGAILVS-PEVSEVIHSQSNTLGSFSHGFTY  378 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG~-~pig~v~~~-~~i~~~l~~~~~~~~~~~~~~t~  378 (514)
                      ++|+++|+|.....      +..+.....-.|||+  ..|-++|.. .-.|+++++ +++.+.+...     ....|  .
T Consensus       163 ~~g~~~vVDNT~at------P~~~~Pl~~GaDiVvhS~TKyi~Ghsdv~~G~vv~~~~~~~~~~~~~-----~~~~G--~  229 (384)
T d1cs1a_         163 EVGAVSVVDNTFLS------PALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWW-----ANNIG--V  229 (384)
T ss_dssp             HTTCEEEEECTTTC------TTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHH-----HHHHT--C
T ss_pred             hcCcEEEEeccccC------cccccccccCCCEEEEccccccccCCCcccccccCCchhhhhhhhhh-----hhhhh--h
Confidence            99999999998742      123333444468875  669888732 334556664 4555554421     01122  2


Q ss_pred             CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccCCCceeE------------------EEeeeeeEEEEEcc
Q 010250          379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSDSPIIGE------------------IRGTGLILGTEFAD  440 (514)
Q Consensus       379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~------------------v~g~g~~~~i~~~~  440 (514)
                      ..+|..+...+..|+.+.-  ..++..+++..+.+.|+..   |.+..                  ..|.|.++.+++..
T Consensus       230 ~~~p~~a~ll~rgL~TL~l--Rm~~~~~nA~~lA~~L~~h---p~V~~V~yPgL~s~p~h~l~~r~~~g~gg~~sf~l~~  304 (384)
T d1cs1a_         230 TGGAFDSYLLLRGLRTLVP--RMELAQRNAQAIVKYLQTQ---PLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG  304 (384)
T ss_dssp             BCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHTTC---TTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS
T ss_pred             ccccccHHHHhhccchhHH--HHHHHHHHHHHHHHhcccC---CceeeeeeccccchhHHHHHHhhcCCCcceeEEeecc
Confidence            3467777666666654431  2445555556666666542   22222                  33457788888754

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=99.14  E-value=6.3e-11  Score=117.19  Aligned_cols=319  Identities=13%  Similarity=0.050  Sum_probs=155.7

Q ss_pred             CHHHHHHHHHHHhcCC--------ccccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHH-HHHHHHHhh
Q 010250          118 EPRLVAAATAQLNTLP--------FYHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQV-KLVWYYNNA  188 (514)
Q Consensus       118 ~p~v~~A~~~~l~~~~--------~~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Al-k~a~~~~~~  188 (514)
                      +++|++||.+++-...        .+|+. ....+...+..+.|++++...+-..++|+++++++++.|+ ...+     
T Consensus        15 p~~V~eam~~~~~~~~~~~~~~~~~sHRs-~ef~~~~~~~r~~l~~l~~~~~~~~i~~~~gs~t~~~ea~~~~l~-----   88 (361)
T d2c0ra1          15 PLEVLERAQAEFVDYQHTGMSIMEMSHRG-AVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFL-----   88 (361)
T ss_dssp             CHHHHHHHHHTSSSSTTSSSCGGGSCTTS-HHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHC-----
T ss_pred             CHHHHHHHHHHHhhhcccCccccccCcCC-HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHhccc-----
Confidence            6899999988874421        11210 0123556677888888885444347888777666655444 3332     


Q ss_pred             cCCCCccEEEEEecCCcccceeee-ecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh
Q 010250          189 LGRPNKKKFIARQKSYHGSTLIAA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE  267 (514)
Q Consensus       189 ~~~~~~~~ii~~~~~yHG~t~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~  267 (514)
                         .+.++++....+..+.....+ ...+.........              +....+           .+++++.+   
T Consensus        89 ---~~~~~~l~~~~g~~~~~~~~~~~~~g~~~~~~~~~--------------~~~~~~-----------~~~~~~~~---  137 (361)
T d2c0ra1          89 ---KEGQTANYVMTGSWASKALKEAKLIGDTHVAASSE--------------ASNYMT-----------LPKLQEIQ---  137 (361)
T ss_dssp             ---CTTCEEEEEECSHHHHHHHHHHHHHSCEEEEEECG--------------GGTTCS-----------CCCGGGCC---
T ss_pred             ---cCCCceEEEeechhhhhhhhhhhhcCceeeeeccc--------------cccccc-----------hhhhhhhc---
Confidence               334566666655544321111 1111110000000              000000           01222211   


Q ss_pred             CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcc
Q 010250          268 GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYM  347 (514)
Q Consensus       268 ~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~  347 (514)
                      ..+.+..+.     +++|...+    ++++.++|++||+++++|.|++ +|..    .++...+..|+.+..|.++.+  
T Consensus       138 ~~~~~~~v~-----~~tg~~~~----~~~i~~~~~~~~al~~vDavss-~g~~----~id~~~~di~~~s~~k~~~~~--  201 (361)
T d2c0ra1         138 LQDNAAYLH-----LTSNETIE----GAQFKAFPDTGSVPLIGDMSSD-ILSR----PFDLNQFGLVYAGAQKNLGPS--  201 (361)
T ss_dssp             CCTTEEEEE-----EESEETTT----TEECSSCCCCTTSCEEEECTTT-TTSS----CCCGGGCSEEEEETTTTTCCS--
T ss_pred             ccCcceEEE-----Eeccccee----cceEEEeeccCCceEEEEeecc-cccc----ccccccceeEEEecccccccc--
Confidence            123333322     23455655    5678899999999999999997 5322    233344555777788887653  


Q ss_pred             cceeEEe-CHHHHHHhhhccCCCC----cccccCCCCCcHHHHHHHHHHHHHHhhcc----HHHHHHHHHHHHHhhhhhc
Q 010250          348 PIGAILV-SPEVSEVIHSQSNTLG----SFSHGFTYSGHPVSCAVAIEALKIYKERN----IVEQVNKIAPKFQDGVKAF  418 (514)
Q Consensus       348 pig~v~~-~~~i~~~l~~~~~~~~----~~~~~~t~~~~pl~~aaa~aal~~~~~~~----~~~~~~~~~~~l~~~L~~l  418 (514)
                      |.++++. .+.+...-........    ...........+.....+..++......+    ...+.+.....+.......
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (361)
T d2c0ra1         202 GVTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQS  281 (361)
T ss_dssp             SCEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred             cCcEEEEEhHHhhhCccccccccccccccccccccccccceeeehhhhHHHhhhhccchHHHHHHHHHHHHHhhhhhhhc
Confidence            3444444 3333221110000000    00011112222333333333333332222    2333334444444433332


Q ss_pred             cC-CCcee--EEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CEEEEeCCCCCCHHHHHHH
Q 010250          419 SD-SPIIG--EIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEVDEL  492 (514)
Q Consensus       419 ~~-~~~~~--~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~iRi~p~~~~t~e~id~~  492 (514)
                      .. .+...  ..+. -....+.+.+.           ...+.+...|.++||.+..+-   ..+|++....+|.|||+++
T Consensus       282 ~~~~~~~~~~~~rS-~~~~~~~~~~~-----------~~~~~~~~~L~~~GI~~~~G~~~~g~~RIs~~~~~~~edv~~L  349 (361)
T d2c0ra1         282 GGFYRGCVDVDSRS-DMNITFRLASE-----------ELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEAL  349 (361)
T ss_dssp             TTSSEESSCGGGBC-SSEEEEECSCH-----------HHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHH
T ss_pred             ccccccCCChhhcc-ceEEEEECCCc-----------ccHHHHHHHHHHCCCEEecCCCcCCeEEEEecCCCCHHHHHHH
Confidence            11 11111  1111 12233333321           124568889999999887641   2499999999999999999


Q ss_pred             HHHHHHHHH
Q 010250          493 ISKYGKALK  501 (514)
Q Consensus       493 ~~~l~~~l~  501 (514)
                      ++.|++..+
T Consensus       350 v~~l~~~~~  358 (361)
T d2c0ra1         350 VQFMEHFKR  358 (361)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999988654

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.12  E-value=4.5e-10  Score=111.23  Aligned_cols=214  Identities=12%  Similarity=0.113  Sum_probs=129.8

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      ++....|+++|+++-   +-+.++.++||..|+.+++....        ..+++||+....|-|.......      ...
T Consensus        57 nPt~~~le~~la~LE---g~~~a~~~~SGMaAi~~~l~~l~--------~~Gd~iv~~~~~Yg~T~~l~~~------~l~  119 (391)
T d1cl1a_          57 TLTHFSLQQAMCELE---GGAGCVLFPCGAAAVANSILAFI--------EQGDHVLMTNTAYEPSQDFCSK------ILS  119 (391)
T ss_dssp             CHHHHHHHHHHHHHH---TCSEEEEESSHHHHHHHHHHHHC--------CTTCEEEEETTSCHHHHHHHHH------TGG
T ss_pred             ChhHHHHHHHHHHHh---CCccEEEeccccceeeehhhccc--------CCCCeEEEecccccchhhhhhh------ccc
Confidence            456678999999985   34679999999999999986653        3456788887777554211110      000


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .+++...+   ++..                  +.+++++.+    .+++.+|++|.+.+....+++    +++++++|+
T Consensus       120 ~~Gi~~~~---~d~~------------------d~~~~~~~i----~~~t~~i~~EtpsNP~l~v~D----i~~i~~~a~  170 (391)
T d1cl1a_         120 KLGVTTSW---FDPL------------------IGADIVKHL----QPNTKIVFLESPGSITMEVHD----VPAIVAAVR  170 (391)
T ss_dssp             GGTCEEEE---ECTT------------------CGGGGGGTC----CTTEEEEEEESSCTTTCCCCC----HHHHHHHHH
T ss_pred             cccccccc---ccCc------------------ccccccccc----ccccceeeecccCcccccccc----cHHHHHHHH
Confidence            11110000   0000                  013333333    357899999999888877776    999999997


Q ss_pred             hc--CCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcCC-cccceeEEeCHHHHHHhhhccCCCCcccccCC
Q 010250          303 KY--DILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSSA-YMPIGAILVSPEVSEVIHSQSNTLGSFSHGFT  377 (514)
Q Consensus       303 ~~--gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~gG-~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t  377 (514)
                      ++  |+++|+|......      ..+..+..-.|+++  ..|-++|. -.-.|+++.+++..+.+...     ....|.+
T Consensus       171 ~~~~g~~~vVDnT~atP------~~~~Pl~~GaDivvhS~TKy~~GhsdvlgG~vv~~~~~~~~~~~~-----~~~~G~~  239 (391)
T d1cl1a_         171 SVVPDAIIMIDNTWAAG------VLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLREN-----AYLMGQM  239 (391)
T ss_dssp             HHCTTCEEEEECTTTTT------TSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHHH-----HHHTTCC
T ss_pred             hccCCcEEEEeccccch------hhhcccccccceEEeecchhccccccccccceeccccccccchhh-----hhccccc
Confidence            75  9999999987532      23344444568775  56988883 23456677788777666532     1122222


Q ss_pred             CCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhh
Q 010250          378 YSGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA  417 (514)
Q Consensus       378 ~~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~  417 (514)
                        .+|..+...+..|+.+..  ..++..+++..+.+.|++
T Consensus       240 --~~p~~a~ll~rgl~TL~l--R~~~~~~nA~~vA~~L~~  275 (391)
T d1cl1a_         240 --VDADTAYITSRGLRTLGV--RLRQHHESSLKVAEWLAE  275 (391)
T ss_dssp             --CCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHT
T ss_pred             --CCchhhhhhhccchhHHH--HHHHHHHHHHHHHHHHHh
Confidence              356666666555554432  244455555566666654

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.11  E-value=4.1e-09  Score=103.47  Aligned_cols=320  Identities=16%  Similarity=0.113  Sum_probs=180.0

Q ss_pred             CCHHHHHHHHHHHh-cCCcc---ccccccCC--chHHHHHH-HHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhh
Q 010250          117 SEPRLVAAATAQLN-TLPFY---HSFWNRTT--KPSLDLAK-ELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNA  188 (514)
Q Consensus       117 ~~p~v~~A~~~~l~-~~~~~---~~~~~~~~--~~~~ela~-~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~  188 (514)
                      ..|.|++++..-+. ++.-+   .+++++..  +..+.++. +..++|.   .+.+-. ..||+.||.+++....     
T Consensus        38 ~S~~v~~a~~S~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~---a~~anVqp~SGs~AN~av~~All-----  109 (416)
T d1dfoa_          38 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFG---ADYANVQPHSGSQANFAVYTALL-----  109 (416)
T ss_dssp             CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT---CSEEECCCSSHHHHHHHHHHHHC-----
T ss_pred             CCHHHHHHhcCcccCcccCCCCCCcccCCChhHHHHHHHHHHHHHHHhC---CCcceeecccCccHHHHHHHHhc-----
Confidence            36788877766653 33322   13444432  44444553 4455663   334433 5799999998887663     


Q ss_pred             cCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC
Q 010250          189 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG  268 (514)
Q Consensus       189 ~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~  268 (514)
                         .+.++|+..+...-|+.......+-..   ..|.       .++++    .+ +.      ...|.+.++++..+..
T Consensus       110 ---~pGD~Il~l~l~~GGHlshg~~~~~~g---~~~~-------~~~y~----~d-~~------~~IDyd~l~~~a~~~k  165 (416)
T d1dfoa_         110 ---EPGDTVLGMNLAHGGHLTHGSPVNFSG---KLYN-------IVPYG----ID-AT------GHIDYADLEKQAKEHK  165 (416)
T ss_dssp             ---CTTCEEEEECTTTTCCGGGTCTTSHHH---HHSE-------EEEEC----BC-SS------SSBCHHHHHHHHHHHC
T ss_pred             ---CCCCeeeeccccccccccccccccccC---ceEE-------EEecc----cC-Cc------cCccHHHHHHHHHHhc
Confidence               445788888765544421111000000   0000       00000    00 00      0123588888887765


Q ss_pred             CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhch--hhhhcCC
Q 010250          269 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSF--AKALSSA  345 (514)
Q Consensus       269 ~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~--sK~l~gG  345 (514)
                      |   ..|++-.  +......+    +++++++|++.|++|++|..|. |+-- |..+ ...+.. .|+||.  .|.|.| 
T Consensus       166 P---klIi~G~--S~y~r~~d----~~~~reiad~vga~l~~D~aH~~GLIa-~g~~-~sP~~~-aDvvt~tThKtlrG-  232 (416)
T d1dfoa_         166 P---KMIIGGF--SAYSGVVD----WAKMREIADSIGAYLFVDMAHVAGLVA-AGVY-PNPVPH-AHVVTTTTHKTLAG-  232 (416)
T ss_dssp             C---SEEEEEC--SSCCSCCC----HHHHHHHHHHTTCEEEEECTTTHHHHH-HTSS-CCCTTT-SSEEEEESSSTTCC-
T ss_pred             c---ceEEecc--cccccccC----HHHHHHHHHhcCceEEcchhhhhccee-cccc-CCcccc-cceeeeehhhcccC-
Confidence            5   3555543  22222333    9999999999999999999987 4421 1122 122222 488865  599998 


Q ss_pred             cccceeEEeC---HHHHHHhhhccCCCCcccccCCCCCc-HHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHhhhhhc
Q 010250          346 YMPIGAILVS---PEVSEVIHSQSNTLGSFSHGFTYSGH-PVSCAVAIEALKIYKE---RNIVEQVNKIAPKFQDGVKAF  418 (514)
Q Consensus       346 ~~pig~v~~~---~~i~~~l~~~~~~~~~~~~~~t~~~~-pl~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l  418 (514)
                       -+-|.++++   +++.+.+...      ... +..+++ .-..++-..++....+   .+..+++.++.+.|.+.|.+.
T Consensus       233 -PrggiI~~~~~~~~~~~~i~~a------vfP-g~qggp~~~~iaa~Aval~Ea~~~~fk~Y~~qvv~NA~~La~~L~~~  304 (416)
T d1dfoa_         233 -PRGGLILAKGGSEELYKKLNSA------VFP-GGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLER  304 (416)
T ss_dssp             -CSCEEEEESSCCHHHHHHHHHH------HTT-TTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -CCceEEEeccchHhHHHHHHhh------hCc-ccccCccHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence             356677765   5776777542      111 223332 2223332334444322   356788888999999999875


Q ss_pred             cCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe----e-------CCEEEEeCC----CC
Q 010250          419 SDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV----S-------GDNIMMSPP----FI  483 (514)
Q Consensus       419 ~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~----~-------g~~iRi~p~----~~  483 (514)
                       .+.++..- -...++.+++.+...          .+......|.+.||.+-.    .       .+.|||.-|    ..
T Consensus       305 -G~~iv~gg-TdnHlvlvdl~~~~~----------~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG  372 (416)
T d1dfoa_         305 -GYKVVSGG-TDNHLFLVDLVDKNL----------TGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRG  372 (416)
T ss_dssp             -TCEEGGGS-CSSSEEEEECGGGTC----------CHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTT
T ss_pred             -CcccccCC-CCCceeEEEecccCC----------CHHHHHHHHHHcCeEEeCCcCCCCCCCCCCCCceEeCCHHHHhCC
Confidence             33333211 123455677654321          145566777888998752    1       246999877    34


Q ss_pred             CCHHHHHHHHHHHHHHHH
Q 010250          484 MSPEEVDELISKYGKALK  501 (514)
Q Consensus       484 ~t~e~id~~~~~l~~~l~  501 (514)
                      ..++|++++.+.|.++++
T Consensus       373 ~~e~d~~~iA~~I~~~l~  390 (416)
T d1dfoa_         373 FKEAEAKELAGWMCDVLD  390 (416)
T ss_dssp             CCHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHH
Confidence            678999999999988874

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=99.09  E-value=1.4e-10  Score=114.36  Aligned_cols=323  Identities=9%  Similarity=-0.037  Sum_probs=157.9

Q ss_pred             CCHHHHHHHHHHHhcCCc--------cccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhh
Q 010250          117 SEPRLVAAATAQLNTLPF--------YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA  188 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~--------~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~  188 (514)
                      -+++|++|+.+++-+...        +|+. ....+...+..+.|++++...+-..++|+++++++++.+.....     
T Consensus        14 ~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs-~~~~~~~~~~r~~l~~l~~~~~~~~i~~~~gt~~~~~~~~~~~~-----   87 (360)
T d1w23a_          14 LPKPALERAQKELLNFNDTQMSVMELSHRS-QSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNL-----   87 (360)
T ss_dssp             CCHHHHHHHHHTSSSSTTSSSCGGGSCTTS-HHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHH-----
T ss_pred             CCHHHHHHHHHHHHhhcccCccccccCcCC-HHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhhh-----
Confidence            479999999998754211        1110 00123556778889998865443467888887777766655443     


Q ss_pred             cCCCCccEEEEEecCCcccceeeeec-CCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh
Q 010250          189 LGRPNKKKFIARQKSYHGSTLIAASL-SGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE  267 (514)
Q Consensus       189 ~~~~~~~~ii~~~~~yHG~t~~~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~  267 (514)
                       . +++.+++....++++........ .+.........    ...          ...           .++++...   
T Consensus        88 -~-~~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~----------~~~-----------~~~~~~~~---  137 (360)
T d1w23a_          88 -L-TKGTIGNYVLTGSWSEKALKEAKLLGETHIAASTK----ANS----------YQS-----------IPDFSEFQ---  137 (360)
T ss_dssp             -C-CTTCEEEEEECSHHHHHHHHHHHTTSEEEEEEECG----GGT----------SCS-----------CCCGGGCC---
T ss_pred             -c-ccCcccceeeccchhhhhHHHHHHhhhcceeeccc----ccc----------ccc-----------hhhhhhcc---
Confidence             1 34567777766666543221111 01000000000    000          000           01111111   


Q ss_pred             CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcc
Q 010250          268 GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYM  347 (514)
Q Consensus       268 ~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~  347 (514)
                        .....+.++.+   +|.+.|    +++|.++|+++|+++|+|-||+ +|-.  ..-++  .+..|+.+++|.++.+ .
T Consensus       138 --~~~~~~~~~~~---tg~~~~----~~~i~~~~~~~g~l~ivDavqs-~g~~--~id~~--~~~vd~~~~~~~k~~~-~  202 (360)
T d1w23a_         138 --LNENDAYLHIT---SNNTIY----GTQYQNFPEINHAPLIADMSSD-ILSR--PLKVN--QFGMIYAGAQKNLGPS-G  202 (360)
T ss_dssp             --CCTTEEEEEEE---SEETTT----TEECSSCCCCCSSCEEEECTTT-TTSS--CCCGG--GCSEEEEETTTTTSCT-T
T ss_pred             --cccccceeEec---CCcccc----ceeeeeccccceeeEEeecccc-cccc--ccccc--cccceEEeeccccccC-C
Confidence              12223444444   355666    7789999999999999999998 5422  22233  3445888888876654 2


Q ss_pred             cceeEEeCHHHHHHhhhccCCCC---cccc-cCCCCCcHHHHHHHHHHHHHHhhcc----HHHHHHHHHHHHHhhhhhcc
Q 010250          348 PIGAILVSPEVSEVIHSQSNTLG---SFSH-GFTYSGHPVSCAVAIEALKIYKERN----IVEQVNKIAPKFQDGVKAFS  419 (514)
Q Consensus       348 pig~v~~~~~i~~~l~~~~~~~~---~~~~-~~t~~~~pl~~aaa~aal~~~~~~~----~~~~~~~~~~~l~~~L~~l~  419 (514)
                      +.+.++.++...+..........   .... .......+....+...++....+..    ...+.+..............
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (360)
T d1w23a_         203 VTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESN  282 (360)
T ss_dssp             CEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             cceeeEechhhhcccccCCcchhhhhhhhhhhhcccccceeeechhHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhcc
Confidence            34444444433221111000000   0000 0111112222222222222222222    22222222222222222211


Q ss_pred             CC-Cc--eeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CEEEEeCCCCCCHHHHHHHH
Q 010250          420 DS-PI--IGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEVDELI  493 (514)
Q Consensus       420 ~~-~~--~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~iRi~p~~~~t~e~id~~~  493 (514)
                      .. ..  ....|.. ..+.|.+.+.           .....+...|.++|+.++.+-   ..+|++..-.+|.|||++++
T Consensus       283 ~~~~~~~~~~~rS~-~vvsf~i~~~-----------~~~~~~~~~l~~~GI~~~~G~~~~ggiRiS~~~~~t~e~V~~Li  350 (360)
T d1w23a_         283 GFYVGHAEKGSRSL-MNVTFNLRNE-----------ELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIALR  350 (360)
T ss_dssp             TSSEESSCGGGBCS-SEEEEECSSH-----------HHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHH
T ss_pred             cccccCCChhhcce-eEEEEEcCCC-----------ccHHHHHHHHHHCCCeeeeCCCccCcEEEEeeCCCCHHHHHHHH
Confidence            10 11  1111211 2344444321           124568888999999876431   35999966667999999999


Q ss_pred             HHHHHHHHH
Q 010250          494 SKYGKALKA  502 (514)
Q Consensus       494 ~~l~~~l~~  502 (514)
                      +.|++..+.
T Consensus       351 ~~~~~~~~~  359 (360)
T d1w23a_         351 ELMIQFKEN  359 (360)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999887653

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.04  E-value=1.8e-08  Score=98.36  Aligned_cols=321  Identities=13%  Similarity=0.094  Sum_probs=181.8

Q ss_pred             CCHHHHHHHHHHHh-cCCcc---ccccccC--CchHHHHH-HHHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhh
Q 010250          117 SEPRLVAAATAQLN-TLPFY---HSFWNRT--TKPSLDLA-KELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNA  188 (514)
Q Consensus       117 ~~p~v~~A~~~~l~-~~~~~---~~~~~~~--~~~~~ela-~~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~  188 (514)
                      -.|.|+++....+. ++.-.   .+++++.  .+..++++ ++..++|.   .+.+-. ..||+.||.+++....     
T Consensus        35 ~S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~ra~~lF~---a~~anVqp~SGs~An~av~~all-----  106 (405)
T d1kl1a_          35 VSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFG---AEHANVQPHSGAQANMAVYFTVL-----  106 (405)
T ss_dssp             CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHC---CSEEECCCSSHHHHHHHHHHHHC-----
T ss_pred             CCHHHHHHhcCcccCcCcCCCCCccccCCchhHHHHHHHHHHHHHHHhC---CCcceeeccCchHHHHHHHHHhc-----
Confidence            35888888776663 33322   1233333  23333444 44556663   344434 5689999988877653     


Q ss_pred             cCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhC
Q 010250          189 LGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEG  268 (514)
Q Consensus       189 ~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~  268 (514)
                         .++++|+.++...-|+..-.     .+....+..     ...+.+|.    +...      ...|.+.++++..+..
T Consensus       107 ---~pGD~im~l~l~~GGHlshg-----~~~~~~g~~-----~~~~~y~~----d~~~------~~ID~d~l~~~a~~~k  163 (405)
T d1kl1a_         107 ---EHGDTVLGMNLSHGGHLTHG-----SPVNFSGVQ-----YNFVAYGV----DPET------HVIDYDDVREKARLHR  163 (405)
T ss_dssp             ---CTTCEEEEECGGGTCCGGGT-----CTTSHHHHH-----SEEEEECB----CTTT------CSBCHHHHHHHHHHHC
T ss_pred             ---CCCCEEEEeecccccccccC-----ccccccceE-----EEEEEecc----chhc------ccccHHHHHHHHHhhC
Confidence               44678988876554442111     000000000     00000000    0000      1122588888887765


Q ss_pred             CCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhchh--hhhcCC
Q 010250          269 PETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSFA--KALSSA  345 (514)
Q Consensus       269 ~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~s--K~l~gG  345 (514)
                      |   ..||+-...-.   .+.+   +++++++|++.|++|++|-.|. |+-- |..+. ..+. ..|++|.+  |.|.| 
T Consensus       164 P---klIi~G~S~y~---r~~d---~~~~reIad~vga~l~~D~aH~~GLIa-~g~~~-~P~~-~aDvvt~tThKtlrG-  230 (405)
T d1kl1a_         164 P---KLIVAAASAYP---RIID---FAKFREIADEVGAYLMVDMAHIAGLVA-AGLHP-NPVP-YAHFVTTTTHKTLRG-  230 (405)
T ss_dssp             C---SEEEECCSSCC---SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHH-TTSSC-CSTT-TCSEEEEESSSTTCC-
T ss_pred             c---ceEEecccccc---cccC---hHHHHHHHhhhCCEEecchhhHhhhhh-hhhcC-Chhh-hhhheeccccccccC-
Confidence            5   35665443211   2222   8999999999999999999987 4411 21221 2222 25888765  99998 


Q ss_pred             cccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHHHHHHHH-HHHHHHhh---ccHHHHHHHHHHHHHhhhhhccCC
Q 010250          346 YMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAI-EALKIYKE---RNIVEQVNKIAPKFQDGVKAFSDS  421 (514)
Q Consensus       346 ~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~-aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~  421 (514)
                       -+-|.+++++++.+.+...     . . -+..++.-+...||+ .++....+   ++..+++.++++.|.+.|.+. .+
T Consensus       231 -Prgg~I~~~~~~~~~i~~a-----v-f-Pg~qggp~~~~iAa~Aval~Ea~~~~fk~Ya~qvv~NAkaLa~~L~~~-G~  301 (405)
T d1kl1a_         231 -PRGGMILCQEQFAKQIDKA-----I-F-PGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GF  301 (405)
T ss_dssp             -CSCEEEEECHHHHHHHHHH-----H-T-TTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred             -CCCceEEecchhHHHHHhh-----h-C-cccccCcchhHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcC-Cc
Confidence             4678888999988888752     1 1 123333222222222 33443322   356778888999999998875 33


Q ss_pred             CceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe----e-------CCEEEEeCC----CCCCH
Q 010250          422 PIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV----S-------GDNIMMSPP----FIMSP  486 (514)
Q Consensus       422 ~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~----~-------g~~iRi~p~----~~~t~  486 (514)
                      .++..- -...++.+++.....          .+....+.|.+.||.+-.    .       .+.|||.-|    ....+
T Consensus       302 ~vv~gg-Td~H~vlvdl~~~~~----------~g~~ae~~Le~agI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e  370 (405)
T d1kl1a_         302 TLVSGG-TDNHLLLVDLRPQQL----------TGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGL  370 (405)
T ss_dssp             EEGGGS-CSSSEEEEECGGGTC----------CHHHHHHHHHHHTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCH
T ss_pred             eeecCC-CccceeeccccccCC----------cHHHHHHHHHHcCeEEcCCcCCCCCCCCCCCCceeecCHHHHhCCCCH
Confidence            333210 023356666654321          144455667788998762    1       146999877    34678


Q ss_pred             HHHHHHHHHHHHHHH
Q 010250          487 EEVDELISKYGKALK  501 (514)
Q Consensus       487 e~id~~~~~l~~~l~  501 (514)
                      +|+.++.+.|.++++
T Consensus       371 ~dm~~ia~~I~~~l~  385 (405)
T d1kl1a_         371 EEMDEIAAIIGLVLK  385 (405)
T ss_dssp             HHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999998884

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.02  E-value=1.2e-09  Score=106.05  Aligned_cols=234  Identities=15%  Similarity=0.132  Sum_probs=140.2

Q ss_pred             HHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccCCCCCC
Q 010250          148 DLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLP  227 (514)
Q Consensus       148 ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~  227 (514)
                      .|+++|+++-   +-+.++.++||..|+..++....        ..+++||+.+..|+|.......      ....+++.
T Consensus         2 aLE~~la~Le---g~~~a~~~sSGMaAi~~~l~~ll--------~~Gd~iv~~~~~Yg~t~~~~~~------~l~~~gi~   64 (331)
T d1pffa_           2 ALEGKIAKLE---HAEACAATASGMGAIAASVWTFL--------KAGDHLISDDCLYGCTHALFEH------QLRKFGVE   64 (331)
T ss_dssp             HHHHHHHHHH---TCSEEEEESSHHHHHHHHHHHHC--------CTTCEEEEESCCCHHHHHHHHT------HHHHTTCE
T ss_pred             HHHHHHHHHh---CCCeEEEECCHHHHHHHHHHHHh--------CCCCEEEEeCCCchHHHHHHHH------HHHhcCeE
Confidence            4778888885   34678999999999988886543        2346899988889775311110      01112211


Q ss_pred             CCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHH-HhcCC
Q 010250          228 APFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVV-KKYDI  306 (514)
Q Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~-~~~gi  306 (514)
                      ..+   ++..                  +.+.+++.+.    +++..|++|.+.++...+++    ++.+.+++ +++|+
T Consensus        65 ~~~---~d~~------------------d~~~~~~~i~----~~t~~i~~Es~~np~~~v~d----~~~~~~~~a~~~~~  115 (331)
T d1pffa_          65 VDF---IDMA------------------VPGNIEKHLK----PNTRIVYFETPANPTLKVID----IEDAVKQARKQKDI  115 (331)
T ss_dssp             EEE---ECTT------------------STTHHHHTCC----TTEEEEEEESSCTTTCCCCC----HHHHHHHHTTSSSC
T ss_pred             EEE---eccc------------------chhhHhhhcc----cccceeeeeccccccccccc----chhhhhhhhcccCc
Confidence            111   1100                  0244444443    57889999998888777766    88888875 67899


Q ss_pred             EEEEechhcCcccccccceecccCCCCchhc--hhhhhcC-CcccceeEEeCHHHHHHhhhccCCCCcccccCCCCCcHH
Q 010250          307 LFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSS-AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTYSGHPV  383 (514)
Q Consensus       307 llI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~g-G~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~~~~pl  383 (514)
                      ++|+|...+..      ..+.......|+++  ..|-++| +-.-.|+++++++........     .+........+|.
T Consensus       116 ~~vVDnT~atp------~~~~pl~~GaDiVv~S~TKy~~Gh~d~~~G~v~~~~~~~~~~~~~-----~~~~~~G~~l~p~  184 (331)
T d1pffa_         116 LVIVDNTFASP------ILTNPLDLGVDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQ-----GIKDITGAIISPH  184 (331)
T ss_dssp             EEEEECTTTHH------HHCCGGGGTCSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHT-----CCCCCCCCCCCHH
T ss_pred             eEEeecccccc------ccccccccCCCEEEecchhhcCCCCccccccccccccchhhhhhh-----hhhhccCCCCCHH
Confidence            99999986532      23444444468885  5698888 334456778887765554321     1111112234577


Q ss_pred             HHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhhccC-----CCcee----------EEEeeeeeEEEEEcc
Q 010250          384 SCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKAFSD-----SPIIG----------EIRGTGLILGTEFAD  440 (514)
Q Consensus       384 ~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~-----~~~~~----------~v~g~g~~~~i~~~~  440 (514)
                      .|...+..++.+..  ..++..+++..+.+.|++.+.     +|...          ...+.|.++.+++..
T Consensus       185 ~a~ll~rgl~Tl~~--Rm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~g~l~sf~l~~  254 (331)
T d1pffa_         185 DAWLITRGTLTLDM--RVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDG  254 (331)
T ss_dssp             HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS
T ss_pred             HHHHHHHHHHHHHH--HHHHHHHHHHHHHHhhhhCCcEEeeccccccCccHHHHHhhcccccCcccceeecc
Confidence            77777777776542  245555666666666654311     22111          134567788888753

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=99.02  E-value=6e-10  Score=109.35  Aligned_cols=324  Identities=11%  Similarity=-0.035  Sum_probs=158.8

Q ss_pred             CCHHHHHHHHHHHhcCCc--------cccccccCCchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhh
Q 010250          117 SEPRLVAAATAQLNTLPF--------YHSFWNRTTKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNA  188 (514)
Q Consensus       117 ~~p~v~~A~~~~l~~~~~--------~~~~~~~~~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~  188 (514)
                      -+|+|++|+.+++.+...        +|+. ....+...+..+.|+++++..+...|+|+++++++.+.++....     
T Consensus        12 ~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs-~ef~~l~~~~r~~l~~l~~~~~~~~v~~~~gs~t~~~~a~~~~~-----   85 (360)
T d1bjna_          12 LPAEVLKQAQQELRDWNGLGTSVMEVSHRG-KEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNI-----   85 (360)
T ss_dssp             CCHHHHHHHHHTSSSGGGSSSCGGGSCTTS-HHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHH-----
T ss_pred             CCHHHHHHHHHHHhhhcccCccccccCcCC-HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCchHHHHhhhhhcc-----
Confidence            479999999998754211        1110 00124456778888998865444578888877777666654332     


Q ss_pred             cCCCCccEEEEEecCCcccceeeeecCC-CccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHh
Q 010250          189 LGRPNKKKFIARQKSYHGSTLIAASLSG-LPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKE  267 (514)
Q Consensus       189 ~~~~~~~~ii~~~~~yHG~t~~~~~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~  267 (514)
                        ..++..++....++.+.......... ......... .....             .           .+++++++.  
T Consensus        86 --~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-------------~-----------~~~~~~~~~--  136 (360)
T d1bjna_          86 --LGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKV-TVDGL-------------R-----------AVKPMREWQ--  136 (360)
T ss_dssp             --CTTCCEEEEEESSHHHHHHHHHHTTTSEEEEEECEE-EETTE-------------E-----------EECCGGGCC--
T ss_pred             --cccccccceecccchhhhhHHHHhhcCccceeeccc-cCCCc-------------c-----------hhhhhhhhc--
Confidence              13455566665555443222111110 000000000 00000             0           011111111  


Q ss_pred             CCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhcCcccccccceecccCCCCchhchhhhhcCCcc
Q 010250          268 GPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVSFAKALSSAYM  347 (514)
Q Consensus       268 ~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~~sK~l~gG~~  347 (514)
                      ...++.+|..  ..+.+|...+.+    .+  .|+.+++++++|-+++ ++..    .++..+++.|+.+.+|+++++ .
T Consensus       137 ~~~~~v~v~~--~~~~t~~~~~~~----~i--~~~~~~~~v~vDa~~~-~~~~----~vd~~~~dv~~~ss~k~~~~~-~  202 (360)
T d1bjna_         137 LSDNAAYMHY--CPNETIDGIAID----ET--PDFGADVVVAADFSST-ILSR----PIDVSRYGVIYAGAQKNIGPA-G  202 (360)
T ss_dssp             CCSSCSCEEE--CSEETTTTEECC----CC--CCCCTTCCEEEECTTT-TTSS----CCCGGGCSEEEEETTTTTSST-T
T ss_pred             cCCceeEEEe--cccccccCcccc----ce--ecccccceeeeeeecc-ccce----eeeeccceeEEEEcccccccC-C
Confidence            1112223322  234455555532    22  4677899999998876 4322    345556656677788998876 3


Q ss_pred             cceeEEeCHHHHHHhhhccCCCC---cccc-cCCCCCcHHHHHHHH-HHHHHHhhc---cHHHHHHHHHHHHHhhhhhcc
Q 010250          348 PIGAILVSPEVSEVIHSQSNTLG---SFSH-GFTYSGHPVSCAVAI-EALKIYKER---NIVEQVNKIAPKFQDGVKAFS  419 (514)
Q Consensus       348 pig~v~~~~~i~~~l~~~~~~~~---~~~~-~~t~~~~pl~~aaa~-aal~~~~~~---~~~~~~~~~~~~l~~~L~~l~  419 (514)
                      +.+.++.++...+..........   .... .......+.....+. ..+....+.   ...++.++....+...+....
T Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (360)
T d1bjna_         203 LTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSD  282 (360)
T ss_dssp             CEEEEEEGGGCSCCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred             CceeEeeehhhhhccccCCcchhhHHHHhhhhhccccccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhhhccc
Confidence            55556655543322211000000   0000 111122222222232 223333221   223334444444444444331


Q ss_pred             CC--CceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEeeC---CEEEEeCCCCCCHHHHHHHHH
Q 010250          420 DS--PIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVSG---DNIMMSPPFIMSPEEVDELIS  494 (514)
Q Consensus       420 ~~--~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---~~iRi~p~~~~t~e~id~~~~  494 (514)
                      ..  ......+ .-..+.+.+++..           ..+.+...|.++||.+..+.   ..+|++....+|+|||+++++
T Consensus       283 ~~~~~~~~~~r-s~~v~~f~~~~~~-----------~~~~~~~~l~~~Gi~~~~G~~~~g~~Ris~~~~~t~edV~~li~  350 (360)
T d1bjna_         283 FYRNDVAKRNR-SRMNVPFQLADSA-----------LDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTD  350 (360)
T ss_dssp             SEECCBCGGGB-CSSEEEEEESSGG-----------GHHHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHH
T ss_pred             cccccCCcccc-cceEEEEEcCCcc-----------cHHHHHHHHHHCCCEeecCCCccCeEEEEecCCCCHHHHHHHHH
Confidence            11  1111111 1234556665322           24567888999999887542   249999888899999999999


Q ss_pred             HHHHHHH
Q 010250          495 KYGKALK  501 (514)
Q Consensus       495 ~l~~~l~  501 (514)
                      .|++..+
T Consensus       351 ~l~e~~~  357 (360)
T d1bjna_         351 FMVEFER  357 (360)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9998654

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.01  E-value=2.5e-08  Score=98.55  Aligned_cols=216  Identities=15%  Similarity=0.115  Sum_probs=128.8

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      ++....|+++|+++-   +-+.++.++||..|+.+++....        ...+.|+..+..|.|.......      ...
T Consensus        58 nPT~~~le~~la~LE---g~~~a~~~sSGmaAi~~~~l~l~--------~~gd~vv~~~~~yg~t~~~~~~------~~~  120 (394)
T d1e5ea_          58 NPTVSNLEGKIAFLE---KTEACVATSSGMGAIAATVLTIL--------KAGDHLISDECLYGCTHALFEH------ALT  120 (394)
T ss_dssp             CHHHHHHHHHHHHHH---TCSEEEEESSHHHHHHHHHHHHC--------CTTCEEEEESCCCHHHHHHHHT------HHH
T ss_pred             CHHHHHHHHHHHHHh---CCcceeeeccchHHHHHHHHhhc--------ccccccccccceeehhhHhHHH------Hhh
Confidence            455678999999885   34678999999999998875542        3456777766666553211110      001


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++..   +..++..                  +.+++++.+.    +++.+|++|.+.+....++.    ++++.++++
T Consensus       121 ~~gi~---~~~~d~~------------------d~~~~~~~i~----~~t~lv~~Etp~NP~l~v~D----i~~~~~~~~  171 (394)
T d1e5ea_         121 KFGIQ---VDFINTA------------------IPGEVKKHMK----PNTKIVYFETPANPTLKIID----MERVCKDAH  171 (394)
T ss_dssp             HTTCE---EEEECTT------------------STTHHHHHCC----TTEEEEEEESSCTTTCCCCC----HHHHHHHHH
T ss_pred             cccee---eeccCCC------------------CHHHHHHhhc----ccccEEEEeccCCcceeeeh----hhhhhhccc
Confidence            11111   1111110                  0245555553    57889999998888777776    888887665


Q ss_pred             -hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcC-CcccceeEEeCHHHHHHhhhccCCCCcccccCCC
Q 010250          303 -KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSS-AYMPIGAILVSPEVSEVIHSQSNTLGSFSHGFTY  378 (514)
Q Consensus       303 -~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~g-G~~pig~v~~~~~i~~~l~~~~~~~~~~~~~~t~  378 (514)
                       ++|+++|+|...+..      ..++.+....|||+  ..|-++| +-.-.|+++++++.....+..     .+......
T Consensus       172 ~~~g~~vvvDnT~atP------~~~~Pl~~GaDiVvhS~TKy~~GhsDv~~G~v~~~~~~~~~~~~~-----~~~~~~G~  240 (394)
T d1e5ea_         172 SQEGVLVIADNTFCSP------MITNPVDFGVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMV-----GIKDITGS  240 (394)
T ss_dssp             TSTTCEEEEECTTTCT------TTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHT-----CCCCCCCC
T ss_pred             cccCeEEEecCcccCc------ccCCchhcCCCEEEechhhhcCCCcccccccccchhhHHHHHHHH-----HHHHhhCC
Confidence             578999999986522      23444444568875  6698988 324456678888876655421     11111122


Q ss_pred             CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhhhhh
Q 010250          379 SGHPVSCAVAIEALKIYKERNIVEQVNKIAPKFQDGVKA  417 (514)
Q Consensus       379 ~~~pl~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~  417 (514)
                      ..+|..+...+..|+.+..  ..++..+++..+.+.|++
T Consensus       241 ~lsp~~a~ll~rgl~TL~l--Rm~r~~~nA~~lA~~L~~  277 (394)
T d1e5ea_         241 VISPHDAWLITRGLSTLNI--RMKAESENAMKVAEYLKS  277 (394)
T ss_dssp             CCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHHT
T ss_pred             CCChHHHHHHHhhchhHHH--HHHHHHHHHHHHHHHHhh
Confidence            2457777766666665432  244455555556665554

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=99.01  E-value=3.8e-08  Score=99.53  Aligned_cols=332  Identities=14%  Similarity=0.122  Sum_probs=186.7

Q ss_pred             CCCHHHHHHHHHHHhcCCcccccc-----ccCCchHHHHHHHHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhhc
Q 010250          116 GSEPRLVAAATAQLNTLPFYHSFW-----NRTTKPSLDLAKELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNAL  189 (514)
Q Consensus       116 h~~p~v~~A~~~~l~~~~~~~~~~-----~~~~~~~~ela~~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~~  189 (514)
                      |-+|.|.+.+.+.   +..|+++.     .+.....-|+...|++++   ++|-+-. ...|+.|...|+.+++.+++++
T Consensus        76 hy~P~v~~~~~~~---~TaYTPYQPaEiSQG~LQalfEfQtmi~eLT---GMdvaNaS~yDGatA~aeA~~ma~r~~~~~  149 (471)
T d1wyub1          76 KYNPKLHEEAARL---FADLHPYQDPRTAQGALRLMWELGEYLKALT---GMDAITLEPAAGAHGELTGILIIRAYHEDR  149 (471)
T ss_dssp             CCCCHHHHHHHHT---TSSCCTTSCGGGCHHHHHHHHHHHHHHHHHH---TCSEEECCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred             ccCcchhhhHHHH---HhccCCCCCHHHHHHHHHHHHHHHHHHHHHh---CCCccccccchHHHHHHHHHHHHHHHhhhc
Confidence            5578888887652   33333321     122334456778888886   6765433 3468888889999998887776


Q ss_pred             CCCCccEEEEEecCCcccceeeeecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCC
Q 010250          190 GRPNKKKFIARQKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGP  269 (514)
Q Consensus       190 ~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~  269 (514)
                      +...+..++.....+|..........+.....            ++....      +.       .+.++++..    ..
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~------~~-------~~~~~~~~~----~~  200 (471)
T d1wyub1         150 GEGRTRRVVLVPDSAHGSNPATASMAGYQVRE------------IPSGPE------GE-------VDLEALKRE----LG  200 (471)
T ss_dssp             TCTTTCCEEEEETTSCTHHHHHHHHTTCEEEE------------ECBCTT------SS-------BCHHHHHHH----CS
T ss_pred             ccccccccccCCcccccceeeeeecccceeec------------cccccc------cc-------ccchhhhhh----hh
Confidence            66555566666776765432222222211100            000000      00       002333322    23


Q ss_pred             CcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc----CcccccccceecccCCCCchhch--hh---
Q 010250          270 ETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC----AFGRLGTMFGCDKYSIKPDLVSF--AK---  340 (514)
Q Consensus       270 ~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t----G~gr~G~~~~~~~~gv~pDiv~~--sK---  340 (514)
                      ++++++++...+..|.....    .+++.+++++.|.++++|-+.-    |+-+.|..      +  -|+++.  ++   
T Consensus       201 ~~~a~v~v~~p~~~g~~e~~----~~~~~~~~h~~g~~~~~~~~~~~~~~~l~~p~~~------g--~div~vg~~q~~G  268 (471)
T d1wyub1         201 PHVAALMLTNPNTLGLFERR----ILEISRLCKEAGVQLYYDGANLNAIMGWARPGDM------G--FDVVHLNLHKTFT  268 (471)
T ss_dssp             TTEEEEEECSSCTTSCCCTT----HHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHH------T--CSEEECCTTTTTC
T ss_pred             ccccceeeccCCCcccccch----hhhhHHHHHhccccccccccchhhhhhccccCcc------c--ccccccccccccc
Confidence            67888888877666543322    7889999999999888875432    12111111      1  244432  23   


Q ss_pred             -hhcCCcccceeEEeCHHHHHHhhhcc------------CCCCcccccCCCCCcHHHHHHHHHHHHHHhhcc---HHHHH
Q 010250          341 -ALSSAYMPIGAILVSPEVSEVIHSQS------------NTLGSFSHGFTYSGHPVSCAVAIEALKIYKERN---IVEQV  404 (514)
Q Consensus       341 -~l~gG~~pig~v~~~~~i~~~l~~~~------------~~~~~~~~~~t~~~~pl~~aaa~aal~~~~~~~---~~~~~  404 (514)
                       .+++|+.-+|++.++++++..+..+-            .+.....--.+.+++.+.+.+|...+..+-.++   +.+..
T Consensus       269 ~P~~~GGP~~G~~a~~~~~~R~~PGRiV~~~~~~~~~~~~REqhIrRe~actnqaL~al~A~vYlsllG~~GL~elA~~~  348 (471)
T d1wyub1         269 VPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALA  348 (471)
T ss_dssp             CCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccceeehhhhhccCCCceecCCCccccccCCCcccccchhhhhhhHHHHHHHHHHHHHhCchhHHHHHHHH
Confidence             34556555888999999877664210            000000101122334444444444556665544   46678


Q ss_pred             HHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe------eCCEEEE
Q 010250          405 NKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV------SGDNIMM  478 (514)
Q Consensus       405 ~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~------~g~~iRi  478 (514)
                      .++..++.++|+.. ......   ....+.-|.+..+...         ....+.++|++.|++...      ..+.+.+
T Consensus       349 ~~~A~Yla~~L~~~-G~~~~~---~~~ff~EFvv~~~~~~---------~~~~i~k~L~~~G~~~~~~~~p~~~~~~llv  415 (471)
T d1wyub1         349 VLNARYLKELLKEK-GYRVPY---DGPSMHEFVAQPPEGF---------RALDLAKGLLELGFHPPTVYFPLIVKEALMV  415 (471)
T ss_dssp             HHHHHHHHHHHHHT-TCBCSS---CSSCCSCEEEBCSTTC---------CHHHHHHHHHHTTCCCCEESCSTTSTTCEEE
T ss_pred             HHHHHHHHHHHhhc-Cceecc---CcceeeEEeecCCCCC---------CHHHHHHHHHHcCCCCCcccCcCCCCCeEEE
Confidence            88889999998653 221111   1111222222221110         134578899999987532      1356889


Q ss_pred             eCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 010250          479 SPPFIMSPEEVDELISKYGKALKATEERV  507 (514)
Q Consensus       479 ~p~~~~t~e~id~~~~~l~~~l~~~~~~~  507 (514)
                      ++.-..|++|||+++++|++++++.++.+
T Consensus       416 ~vTE~~tkedID~lv~aL~~i~~e~~~~~  444 (471)
T d1wyub1         416 EPTETEAKETLEAFAEAMGALLKKPKEWL  444 (471)
T ss_dssp             CCCTTSCHHHHHHHHHHHHHHHTSCHHHH
T ss_pred             ecCCCCCHHHHHHHHHHHHHHHHhhHHHH
Confidence            99899999999999999999998776433

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=98.95  E-value=7.8e-09  Score=102.82  Aligned_cols=164  Identities=16%  Similarity=0.145  Sum_probs=106.0

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      ++....|+++|+++-   +-+.++.++||..|+.+++....        +.+++||+.+..|+|........      ..
T Consensus        57 nPT~~~LE~~la~LE---~~~~a~~~~SGmaAi~~~~~~l~--------~~gd~il~~~~~Yg~t~~l~~~~------~~  119 (421)
T d2ctza1          57 NPTVDVLEKRLAALE---GGKAALATASGHAAQFLALTTLA--------QAGDNIVSTPNLYGGTFNQFKVT------LK  119 (421)
T ss_dssp             CHHHHHHHHHHHHHH---TCSEEEEESSHHHHHHHHHHHHC--------CTTCEEEECSCCCHHHHHHHHTH------HH
T ss_pred             CHHHHHHHHHHHHHh---CCCeEEEecChHHHHHHHHHhhc--------ccccceeecCCcCCchhHHHHHH------Hh
Confidence            455678999999985   34679999999999988886553        44679999999998863211100      01


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++....+   ++..+         .        .+..++++    .+++++|++|.+.+....+++    +++|+++|+
T Consensus       120 ~~gi~~~~---~d~~~---------~--------~~~~~~~~----~~~t~li~~EtpsNP~l~v~D----i~~i~~iA~  171 (421)
T d2ctza1         120 RLGIEVRF---TSREE---------R--------PEEFLALT----DEKTRAWWVESIGNPALNIPD----LEALAQAAR  171 (421)
T ss_dssp             HTTCEEEE---CCTTC---------C--------HHHHHHHC----CTTEEEEEEESSCTTTCCCCC----HHHHHHHHH
T ss_pred             hcccccee---ccccc---------C--------cchhcccc----CCCceEEEEcCCCcceeEecc----hHHHHHHHH
Confidence            11110000   11000         0        12333333    368999999999999887777    999999999


Q ss_pred             hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcC-CcccceeEEeCH
Q 010250          303 KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSS-AYMPIGAILVSP  356 (514)
Q Consensus       303 ~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~g-G~~pig~v~~~~  356 (514)
                      ++|+++|+|...+.   +  +..+.......|+|+  ..|-++| +-.-.|+++.++
T Consensus       172 ~~g~~~vvDnT~a~---t--P~~~~Pl~~GaDiVvhS~TKyl~GHsD~l~G~vv~~~  223 (421)
T d2ctza1         172 EKGVALIVDNTFGM---G--GYLLRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDGG  223 (421)
T ss_dssp             HHTCEEEEECGGGG---G--GTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECS
T ss_pred             hcCCceEecccccc---c--ceeccccccCCcEEEEechhhccCCCCeEEEEEEcCC
Confidence            99999999998641   1  223444445568875  5698888 323345555543

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.93  E-value=1.5e-08  Score=100.05  Aligned_cols=209  Identities=17%  Similarity=0.222  Sum_probs=126.3

Q ss_pred             CchHHHHHHHHHHhcCcCCCCeEEEeCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccccC
Q 010250          143 TKPSLDLAKELLEMFTASKMAKVFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPALHQ  222 (514)
Q Consensus       143 ~~~~~ela~~L~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~~  222 (514)
                      ++....|+++|+++-   +-+.++.++||..|+.+++.+.         ...++||+....|.|........      ..
T Consensus        54 nPT~~~lE~~la~LE---~~~~a~~~sSGmaAi~~~l~~l---------~~gd~iv~~~~~yg~t~~~~~~~------l~  115 (393)
T d1n8pa_          54 NPNRENLERAVAALE---NAQYGLAFSSGSATTATILQSL---------PQGSHAVSIGDVYGGTHRYFTKV------AN  115 (393)
T ss_dssp             CHHHHHHHHHHHHHT---TCSEEEEESCHHHHHHHHHHTS---------CSSCEEEEESSCCHHHHHHHHHT------ST
T ss_pred             ChHHHHHHHHHHHHh---CCceEEEecCchhHHHhhhhcc---------cCCCeeeeeeeecccchhhhhhh------hh
Confidence            455678889999885   3467899999988875444322         33568999999997753221110      11


Q ss_pred             CCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHH
Q 010250          223 KFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVK  302 (514)
Q Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~  302 (514)
                      .++....++   +                   .+.+++++++.    +++.+|++|.+-+....++.    +++|.++|+
T Consensus       116 ~~gi~~~~~---~-------------------~~~~~~~~~i~----~~t~lv~~EspsNP~l~v~D----i~~ia~~a~  165 (393)
T d1n8pa_         116 AHGVETSFT---N-------------------DLLNDLPQLIK----ENTKLVWIETPTNPTLKVTD----IQKVADLIK  165 (393)
T ss_dssp             TTCSCCEEE---S-------------------SHHHHHHHHSC----SSEEEEEECSSCTTTCCCCC----HHHHHHHHH
T ss_pred             cccceeEEe---e-------------------cchHHHHHHhh----hhcceeEecCcchhhhhccc----hhhhhhhhh
Confidence            112111110   0                   01245666553    67899999999888877776    999999999


Q ss_pred             ----hcCCEEEEechhcCcccccccceecccCCCCchhc--hhhhhcC-CcccceeEEeC-HHHHHHhhhccCCCCcccc
Q 010250          303 ----KYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS--FAKALSS-AYMPIGAILVS-PEVSEVIHSQSNTLGSFSH  374 (514)
Q Consensus       303 ----~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~--~sK~l~g-G~~pig~v~~~-~~i~~~l~~~~~~~~~~~~  374 (514)
                          ++|+++|+|.....      +..+..+..-.|||+  ..|-++| +-.-.|+++.+ +++.+.+...     ....
T Consensus       166 ~~~~~~g~~lvVDnT~at------P~~~~Pl~~GADiVvhS~TKyi~GhsDv~~G~v~~~~~~~~~~l~~~-----~~~~  234 (393)
T d1n8pa_         166 KHAAGQDVILVVDNTFLS------PYISNPLNFGADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFL-----QNAI  234 (393)
T ss_dssp             HHTTTTTCEEEEECTTTH------HHHCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHH-----HHHH
T ss_pred             hhcccCCceEEEecCccC------cccCCchhhCCCEEEEccccccCCCCccccceeeecchhHHHHHHHH-----Hhhc
Confidence                78999999998642      223344444468875  5698888 32334555554 5566666531     0112


Q ss_pred             cCCCCCcHHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHH
Q 010250          375 GFTYSGHPVSCAVAIEALKIYKE--RNIVEQVNKIAPKFQ  412 (514)
Q Consensus       375 ~~t~~~~pl~~aaa~aal~~~~~--~~~~~~~~~~~~~l~  412 (514)
                      |  ...+|..+...+..|+.+..  +...++..+..++|.
T Consensus       235 G--~~~~p~~a~ll~rgl~Tl~lR~~~~~~nA~~lA~~L~  272 (393)
T d1n8pa_         235 G--AIPSPFDAWLTHRGLKTLHLRVRQAALSANKIAEFLA  272 (393)
T ss_dssp             C--CCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHT
T ss_pred             C--CCCChHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHH
Confidence            2  23457777777776665432  223444444555553

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=98.86  E-value=1.8e-07  Score=93.33  Aligned_cols=293  Identities=10%  Similarity=0.059  Sum_probs=164.9

Q ss_pred             CCchHHHHHHHHHHhcCcCCCCeEEE-eCChhHHHHHHHHHHHHHHhhcCCCCccEEEEEecCCcccceeeeecCCCccc
Q 010250          142 TTKPSLDLAKELLEMFTASKMAKVFF-TNSGSEANDTQVKLVWYYNNALGRPNKKKFIARQKSYHGSTLIAASLSGLPAL  220 (514)
Q Consensus       142 ~~~~~~ela~~L~~~~~~~~~~~v~~-~~sGseA~~~Alk~a~~~~~~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~  220 (514)
                      .....-++.+.|+++.   +++.+-+ ...|+.|...++.+++.|+      +++++++. ..-|..+.+....+...  
T Consensus       106 ~Lq~l~e~q~~l~elt---Gmd~~n~s~~~ga~a~~~~~~~~~~~~------~~~~~~v~-~~~~p~~~~v~~t~a~~--  173 (437)
T d1wyua1         106 VLQATFEYQTMIAELA---GLEIANASMYDGATALAEGVLLALRET------GRMGVLVS-QGVHPEYRAVLRAYLEA--  173 (437)
T ss_dssp             HHHHHHHHHHHHHHHH---TSSEECSCBSSHHHHHHHHHHHHHHHH------TCCEEEEE-TTSCHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHhh---CCCccccCchHHHHHHHHHHHHHHhhh------cccccccc-cccChHHhhhhhhhccc--
Confidence            4455667889999986   6776655 4579999999999998774      45566654 44454433322111000  


Q ss_pred             cCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHH
Q 010250          221 HQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAV  300 (514)
Q Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l  300 (514)
                       .++.     +..++..+ .+..                +    .+ -.+++|+|++... +..|.+..    ++++.++
T Consensus       174 -~g~~-----vv~v~~~~-~~~~----------------~----~~-~~~~~Aavmi~~P-nt~G~~ed----~~~i~~~  220 (437)
T d1wyua1         174 -VGAK-----LLTLPLEG-GRTP----------------L----PE-VGEEVGAVVVQNP-NFLGALED----LGPFAEA  220 (437)
T ss_dssp             -TTCE-----EEEECCBT-TBCC----------------C----CC-CCTTEEEEEEESS-CTTSBCCC----HHHHHHH
T ss_pred             -ceee-----EEeeeccc-ccch----------------h----hh-hccceeEEEEccc-cccccccc----hHHHHHH
Confidence             0000     11111100 0000                0    00 1367888888665 44577753    8999999


Q ss_pred             HHhcCCEEEEechhcCcccccccceecccCCCCchhc-----hhhhhcCCcccceeEEeCHHHHHHhhhccCCCC-----
Q 010250          301 VKKYDILFIADEVICAFGRLGTMFGCDKYSIKPDLVS-----FAKALSSAYMPIGAILVSPEVSEVIHSQSNTLG-----  370 (514)
Q Consensus       301 ~~~~gillI~DEv~tG~gr~G~~~~~~~~gv~pDiv~-----~sK~l~gG~~pig~v~~~~~i~~~l~~~~~~~~-----  370 (514)
                      +++.|.++|+|--...++-.-.+   ..+|  .|+++     ||=.+++|+-..|.+.+++++...+..+  ..+     
T Consensus       221 ~h~~G~l~~~~ad~~al~~l~~P---g~~G--aDi~~g~~q~fg~p~g~GGP~~G~~a~~~~l~r~lPgr--ivg~s~d~  293 (437)
T d1wyua1         221 AHGAGALFVAVADPLSLGVLKPP---GAYG--ADIAVGDGQSLGLPMGFGGPHFGFLATKKAFVRQLPGR--LVSETVDV  293 (437)
T ss_dssp             HHHTTCEEEEECCTTGGGTBCCH---HHHT--CSEEEEECTTTTCCCGGGCSCCEEEEECGGGGGGCCSC--CEEEEEBT
T ss_pred             hhhccceEEeeechhhhhccccc---cccc--cceEeeccceeccccCCCcCccccccccchhhcccccc--cccccccc
Confidence            99999999887433222111111   1122  37663     4434444445578888898887655321  000     


Q ss_pred             --c--c---------------cccCCCCCcHHHHHHHHHHHHHHhhcc---HHHHHHHHHHHHHhhhhhccCCCceeEEE
Q 010250          371 --S--F---------------SHGFTYSGHPVSCAVAIEALKIYKERN---IVEQVNKIAPKFQDGVKAFSDSPIIGEIR  428 (514)
Q Consensus       371 --~--~---------------~~~~t~~~~pl~~aaa~aal~~~~~~~---~~~~~~~~~~~l~~~L~~l~~~~~~~~v~  428 (514)
                        .  +               ..+....++.+.+..+..-+..+-.++   +.++...+..++.++|.++...   ..+.
T Consensus       294 ~G~~~~~l~lqtreqhIrRekatsnict~q~l~a~~a~~Y~~~lG~~GL~~ia~~a~~~A~yl~~~L~~~~g~---~~~~  370 (437)
T d1wyua1         294 EGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGV---RPFT  370 (437)
T ss_dssp             TSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTC---EECS
T ss_pred             CCcccceeecccccccccccccccchhhHHHHHHHHHHHHhhhcCcccHHHHHHHHHHHHHHHHHHhhhcCCe---eccC
Confidence              0  0               011112333443334444445544443   4567778889999999876221   1111


Q ss_pred             eeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEe------eCCEEEEeCCCCCCHHHHHHHHHHHHHHH
Q 010250          429 GTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRV------SGDNIMMSPPFIMSPEEVDELISKYGKAL  500 (514)
Q Consensus       429 g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~------~g~~iRi~p~~~~t~e~id~~~~~l~~~l  500 (514)
                      ....+.-+.+.-..           ....+.++|+++|+....      ..+.+.++|.-..|++|||+++++|++++
T Consensus       371 ~~~~f~ef~v~~~~-----------~~~~i~k~L~d~G~~~~~~~~~~~~~~~lli~~TE~~tkeeiD~~v~al~eil  437 (437)
T d1wyua1         371 PKPFFNEFALALPK-----------DPEAVRRALAERGFHGATPVPREYGENLALFAATELHEEEDLLALREALKEVL  437 (437)
T ss_dssp             CSSBCSEEEEECSS-----------CHHHHHHHHHHTTCCCCEECCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred             CCCeeeEEEEECCC-----------CHHHHHHHHHhCCCCCCcccccCCCCCeEEEecCCCCCHHHHHHHHHHHHHhC
Confidence            11122223222111           145688999999997532      23579999999999999999999998764

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=98.70  E-value=2.8e-06  Score=84.04  Aligned_cols=321  Identities=15%  Similarity=0.096  Sum_probs=166.5

Q ss_pred             CCHHHHHHHHHHHh-cCCcc---ccccccC--CchHHHHH-HHHHHhcCcCCCCe---EEEeCChhHHHHHHHHHHHHHH
Q 010250          117 SEPRLVAAATAQLN-TLPFY---HSFWNRT--TKPSLDLA-KELLEMFTASKMAK---VFFTNSGSEANDTQVKLVWYYN  186 (514)
Q Consensus       117 ~~p~v~~A~~~~l~-~~~~~---~~~~~~~--~~~~~ela-~~L~~~~~~~~~~~---v~~~~sGseA~~~Alk~a~~~~  186 (514)
                      ..|.|++|+..-+. ++...   .+++++.  .+..+.++ ++..++|.. ....   -+=..||+.||.+++....   
T Consensus        39 ~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~-~~a~w~vNVqp~SGs~An~av~~all---  114 (463)
T d2a7va1          39 CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDL-DPAQWGVNVQPYSGSPANLAVYTALL---  114 (463)
T ss_dssp             CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTC-CTTTEEEECCCSSHHHHHHHHHHHHC---
T ss_pred             CCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCC-CchhccCCccccccHHHHHHHHHHHc---
Confidence            46777777665553 33221   1233322  34444554 445566632 2221   1336689999988887653   


Q ss_pred             hhcCCCCccEEEEEecCCcccceee-------eecCCCccccCCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHH
Q 010250          187 NALGRPNKKKFIARQKSYHGSTLIA-------ASLSGLPALHQKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANN  259 (514)
Q Consensus       187 ~~~~~~~~~~ii~~~~~yHG~t~~~-------~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (514)
                           .++++|+.++-..-|+..-.       .+.++..     |.       ..++    ..+...      ...|.+.
T Consensus       115 -----~pgD~Im~l~l~~GGHlshg~~~~~~~~~~~g~~-----~~-------~~~Y----~~d~~~------~~IDyd~  167 (463)
T d2a7va1         115 -----QPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIF-----FE-------SMPY----KLNPKT------GLIDYNQ  167 (463)
T ss_dssp             -----CSCEECCC-------------------------------------------C----CBCTTT------CSBCHHH
T ss_pred             -----CCCceEEeeccCcCcccccccccccccccceeeE-----ee-------eeee----eccCCC------CcCcHHH
Confidence                 34567877764443331111       1111100     00       0000    000000      0123588


Q ss_pred             HHHHHHHhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhch
Q 010250          260 LEDLILKEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSF  338 (514)
Q Consensus       260 le~li~~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~  338 (514)
                      ++++..+..|   ..||+-...-.   ...+   +++++++|++.|++|++|-.|. |+--.| .+. ..+.. .|+||.
T Consensus       168 ~~~~a~~~kP---klIi~G~S~y~---r~~d---~~~~reIad~vga~l~~D~aH~aGLIA~g-~~~-sP~~~-aDvvt~  235 (463)
T d2a7va1         168 LALTARLFRP---RLIIAGTSAYA---RLID---YARMREVCDEVKAHLLADMAHISGLVAAK-VIP-SPFKH-ADIVTT  235 (463)
T ss_dssp             HHHHHHHHCC---SEEEECCSSCC---SCCC---HHHHHHHHHHTTCEEEEECGGGHHHHHTT-SSC-CGGGT-CSEEEE
T ss_pred             HHHHHhhcCC---ceEEecccccc---cccC---HHHHHHHhhcccceEEechhhhhHHhhhh-hhc-Chhhh-hhhhhc
Confidence            8888877655   35665443211   2222   8999999999999999999987 542222 221 22222 488876


Q ss_pred             h--hhhcCCcccceeEEeCH---------------HHHHHhhhccCCCCcccccCCCCCcHHHHHHHH-HHHHHHhh---
Q 010250          339 A--KALSSAYMPIGAILVSP---------------EVSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAI-EALKIYKE---  397 (514)
Q Consensus       339 s--K~l~gG~~pig~v~~~~---------------~i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~-aal~~~~~---  397 (514)
                      +  |.|.|  -+-|.+++++               ++.+.+...      .. -+..++.-+...||+ .++....+   
T Consensus       236 tTHKTlrG--PrgGiIl~~~~~~~~~~~~~~~~~~~~~~~i~~a------vF-Pg~qggph~h~iAa~Ava~~ea~~~~f  306 (463)
T d2a7va1         236 TTHKTLRG--ARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFA------VF-PSLQGGPHNHAIAAVAVALKQACTPMF  306 (463)
T ss_dssp             ESSGGGCS--CSCEEEEEECSEEEEETTTEEEEECCCHHHHHHH------HT-TTTCCSCCHHHHHHHHHHHHHHHSHHH
T ss_pred             hhhhhhcC--CCceEEEEcccccccccccCccchhHHHHHhhhh------cC-cccchhhhhhhHHHHHHHHHHhcCchH
Confidence            5  99998  4556677765               445555431      11 122333323333333 23443332   


Q ss_pred             ccHHHHHHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee-----
Q 010250          398 RNIVEQVNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS-----  472 (514)
Q Consensus       398 ~~~~~~~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~-----  472 (514)
                      ++..+++.++.+.|.+.|.+. .+.++..- -...++.+++.+...          -+......|.+.||.+-..     
T Consensus       307 k~Ya~qVv~NAk~La~~L~~~-G~~vv~gg-TdnHlvlvdl~~~~~----------~G~~ae~~Le~~gI~~Nkn~iP~D  374 (463)
T d2a7va1         307 REYSLQVLKNARAMADALLER-GYSLVSGG-TDNHLVLVDLRPKGL----------DGARAERVLELVSITANKNTCPGD  374 (463)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT-TCEEGGGS-CSSSEEEEECTTTTC----------CHHHHHHHHHHTTEECEEECCTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHhC-CCeeecCC-CCCceeeeeccccCC----------CHHHHHHHHHhccCccCCccCCCC
Confidence            346778888888888888775 33333211 112244555543221          1556677888899887621     


Q ss_pred             -----CCEEEEeCCC----CCCHHHHHHHHHHHHHHHH
Q 010250          473 -----GDNIMMSPPF----IMSPEEVDELISKYGKALK  501 (514)
Q Consensus       473 -----g~~iRi~p~~----~~t~e~id~~~~~l~~~l~  501 (514)
                           .+.|||.-|.    ...++|+.++.+.|.+++.
T Consensus       375 ~~~~~~sGiRiGT~a~TtrG~~e~dm~~iA~~I~~~l~  412 (463)
T d2a7va1         375 RSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN  412 (463)
T ss_dssp             CCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCceEeCCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence                 2469998773    4678999999998888774

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=98.64  E-value=3.9e-06  Score=83.20  Aligned_cols=327  Identities=12%  Similarity=0.081  Sum_probs=175.0

Q ss_pred             CCHHHHHHHHHHHh-cCCcc---ccccccC--CchHHHHH-HHHHHhcCcC-CCCeEEE-eCChhHHHHHHHHHHHHHHh
Q 010250          117 SEPRLVAAATAQLN-TLPFY---HSFWNRT--TKPSLDLA-KELLEMFTAS-KMAKVFF-TNSGSEANDTQVKLVWYYNN  187 (514)
Q Consensus       117 ~~p~v~~A~~~~l~-~~~~~---~~~~~~~--~~~~~ela-~~L~~~~~~~-~~~~v~~-~~sGseA~~~Alk~a~~~~~  187 (514)
                      ..|.|++|+..-+. ++...   .+++++.  .+..+.++ ++..++|... +...+-+ ..||+.||.+++....    
T Consensus        43 ~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~~~~~anVqp~SGs~An~av~~all----  118 (470)
T d1rv3a_          43 ASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALV----  118 (470)
T ss_dssp             CCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHT----
T ss_pred             CCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCChhhccccccccCCccHHHHHHHHhc----
Confidence            36777777666553 33322   2333333  22233343 4456666321 1112322 5689999999887654    


Q ss_pred             hcCCCCccEEEEEecCCcccceeeeecCCCcccc--CCCCCCCCcccccCCCCcccCCCCCCChhHHHHHHHHHHHHHHH
Q 010250          188 ALGRPNKKKFIARQKSYHGSTLIAASLSGLPALH--QKFDLPAPFVLHTDCPHYWRYAHPGETEEEYSTRLANNLEDLIL  265 (514)
Q Consensus       188 ~~~~~~~~~ii~~~~~yHG~t~~~~~~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~li~  265 (514)
                          .++++|+.++-.--|+..-+......+...  ..|.       ...++    .+..      ....|.+.++++..
T Consensus       119 ----~pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~~-------~~~y~----v~~~------~~~IDyd~l~~~a~  177 (470)
T d1rv3a_         119 ----EPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFE-------SMAYK----VNPD------TGYIDYDRLEENAR  177 (470)
T ss_dssp             ----CTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSE-------EEEEC----BCTT------TCSBCHHHHHHHHH
T ss_pred             ----CCCCeEeeeccccCCcccccccccCCCcccccceeE-------eeEEE----Eecc------cCcccHHHHHHHHH
Confidence                345788887654433311111100000000  0000       00000    0000      01123578888887


Q ss_pred             HhCCCcEEEEEEccccCCCCcccCChhHHHHHHHHHHhcCCEEEEechhc-CcccccccceecccCCCCchhchh--hhh
Q 010250          266 KEGPETIAAFIAEPVIGAGGVIPPPATYFEKVQAVVKKYDILFIADEVIC-AFGRLGTMFGCDKYSIKPDLVSFA--KAL  342 (514)
Q Consensus       266 ~~~~~~~aavivEpv~~~~G~~~p~~~~L~~l~~l~~~~gillI~DEv~t-G~gr~G~~~~~~~~gv~pDiv~~s--K~l  342 (514)
                      +..|   ..||+-...-.   ...+   +++++++|++.|++|++|-.|. |+--.| .+. ..+.. .|+||.+  |.|
T Consensus       178 ~~kP---klIi~G~S~y~---r~~d---~~~~reIad~vga~l~~D~aH~aGLIA~g-~~~-sPl~~-aDvvt~tTHKtl  245 (470)
T d1rv3a_         178 LFHP---KLIIAGTSCYS---RNLD---YGRLRKIADENGAYLMADMAHISGLVVAG-VVP-SPFEH-CHVVTTTTHKTL  245 (470)
T ss_dssp             HHCC---SEEEECCSSCC---SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHT-SSC-CGGGT-CSEEEEESSGGG
T ss_pred             hhCc---ceEeechhhcc---ccCC---HHHHHHHHhccCCeEEecchhhhhhcccc-ccC-Chhhe-eeeeeeehhhhc
Confidence            7655   35666443221   2222   8999999999999999999987 542222 221 12222 4888765  999


Q ss_pred             cCCcccceeEEeCHH---------------HHHHhhhccCCCCcccccCCCCCcHHHHHHHH-HHHHHHhh---ccHHHH
Q 010250          343 SSAYMPIGAILVSPE---------------VSEVIHSQSNTLGSFSHGFTYSGHPVSCAVAI-EALKIYKE---RNIVEQ  403 (514)
Q Consensus       343 ~gG~~pig~v~~~~~---------------i~~~l~~~~~~~~~~~~~~t~~~~pl~~aaa~-aal~~~~~---~~~~~~  403 (514)
                      .|  -+-|.++++++               +.+.+...     . . -++.+++-+...||+ .++.....   .+..++
T Consensus       246 rG--PrgGiI~~~~~~~~~~~~~~~~~~~~~~~~i~~a-----v-F-Pg~qggph~~~IAa~Ava~~ea~~~~fk~Ya~q  316 (470)
T d1rv3a_         246 RG--CRAGMIFYRRGVRSVDPKTGKEILYNLESLINSA-----V-F-PGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQ  316 (470)
T ss_dssp             CC--CSCEEEEEECSBCC-------CCBCCHHHHHHHH-----H-T-TTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHH
T ss_pred             cC--CcceEEEEccccccccccccchhHHHHHHHHhhh-----c-C-ccccccchhhHHHHHHHHHHHhcChHHHHHHHH
Confidence            98  45566776643               55556531     1 1 123333323333333 34444433   245677


Q ss_pred             HHHHHHHHHhhhhhccCCCceeEEEeeeeeEEEEEccCCCCCCCCCCccchHHHHHHHHHHCCcEEEee----------C
Q 010250          404 VNKIAPKFQDGVKAFSDSPIIGEIRGTGLILGTEFADNKSPNEPFPPEWGIGAYFGAQCEKHGMLVRVS----------G  473 (514)
Q Consensus       404 ~~~~~~~l~~~L~~l~~~~~~~~v~g~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~----------g  473 (514)
                      +.++.+.|.+.|.+. .++++..- -...++.+++.....          -+....+.|.+.||.+-..          .
T Consensus       317 vv~NAk~La~~L~~~-G~~v~~gg-TdnHlvlvdl~~~g~----------~g~~ae~~Le~~gI~~Nkn~iP~D~~~~~~  384 (470)
T d1rv3a_         317 VVANCRALSAALVEL-GYKIVTGG-SDNHLILVDLRSKGT----------DGGRAEKVLEACSIACNKNTCPGDKSALRP  384 (470)
T ss_dssp             HHHHHHHHHHHHHHT-TCEEGGGS-CSSSEEEEEGGGGTC----------CHHHHHHHHHHTTEECEEECCSSCSCTTSC
T ss_pred             HHHHHHHHHHHHHhC-CceeccCC-CCCceEEEeecccCC----------cHHHHHHHHHHcCcEECCCcCCCCCCCCCC
Confidence            888888888888764 33333211 123355566543221          1445667788889987521          2


Q ss_pred             CEEEEeCC----CCCCHHHHHHHHHHHHHHHH
Q 010250          474 DNIMMSPP----FIMSPEEVDELISKYGKALK  501 (514)
Q Consensus       474 ~~iRi~p~----~~~t~e~id~~~~~l~~~l~  501 (514)
                      +.|||.-|    ....++|+.++.+.|.++++
T Consensus       385 sGiRiGT~alTtrG~~e~dm~~iA~~I~~~l~  416 (470)
T d1rv3a_         385 SGLRLGTPALTSRGLLEKDFQKVAHFIHRGIE  416 (470)
T ss_dssp             CEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             CeeEecCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            46999877    45688999999999988874