Citrus Sinensis ID: 010842

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------50
Protein Sequence
MGSLDSNMAESVQFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGSAF
Secondary Structure (PSIPRED)
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHcccccccccccHHHHHHHHHHHHcccccccccccccEEccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHccccccEEEccccccccccccHHHHHHHHHHHHHccccEEEEEEEcccccccccccHHHHHHHHHHcccEEEEcccccccccccccccccccccccccccccccccccccccccEEEEEEcccHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccccEEEEEEEEEcccccccccHHHHHHHHHHHHHHcccEEEEEEEEccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHcccccccccccHHHHHHHHHHHcccccccccccccEEEccccccHHHHHHHHHHHHHHHHcHHHcccHHHHHHHHHHHHHHHHHHcccHHHHcccccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccHHHHHHHHHHHHcccHcEEEEEcccccccccccHHHHHHHHHHHHHccccEEEEEEEcccccccccccHHHHHHHHHHccEEEEEEcHHcccccccHHHHHHHccHHEHcccccccccEEEEEccccEEEEccHHHHHHHHcccHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHccccEEEEccEEEEEEEEEEccccccccccccHHHHHHHHHHHccccEEEEEEEEccEEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mgsldsnmaesvqfkpldAQEFRKQAHQMVDFIADYYqniesypvltqvepgflrsalpdsaphrpeSFETILKDVQEKIipgithwlspnffaffpatvSTAGFLGEMLCACFnsvgfnwlaspastelEIVVMDWLATMLklpktfmfsgtgggviqnttSDSILVTLIAARDRALDAVGAENMHKLVVygsdqthsTFAKVCKlagvspaniralptsvdanfslspQLLRRAVEADVEAGLVPLFLCatvgttsttavdnvepLAEVANEYGIWVHVDAAyagsacicpefrhylngiervdsfsfsphkWLLSYLDCcclwvkqpgllvkalstdpeylknkpsesnsvvdfkdwqvgtgrrfKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGfvksdprfeivvPRHFALVCfrlnpyphsgsadTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAvgasltdeRHVVAAWELIMEGADRLFKGSAF
Flexible Loop (DISEMBL)
mgsldsnmaesVQFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEylknkpsesnsvvdfkdwqvgtgrrfKSLRLWMVLRSYGVlnlqshirSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGadrlfkgsaf
Low Complexity Region (SEG)
MGSLDSNMAESVQFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGSAF
Disordered region (IsUnstruct)
************************QAHQMVDFIADYYQNIESYPVLTQVEPGFLR*************FETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD*************VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL******
Disordered Region (DISOPRED)
******************AQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG***
Disordered Region (DISEMBL)
**********SVQFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGSAF
Disordered Region (DISPRO)
*************FKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGSA*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGSLDSNMAESVQFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGSAF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	499	2.2.26 [Sep-21-2011]
P17770	500	Aromatic-L-amino-acid dec	N/A	no	0.987	0.986	0.68	0.0
P54769	531	Tyrosine/DOPA decarboxyla	N/A	no	0.983	0.924	0.565	0.0
P54770	533	Tyrosine/DOPA decarboxyla	N/A	no	0.983	0.921	0.565	0.0
P54768	518	Tyrosine/DOPA decarboxyla	N/A	no	0.989	0.953	0.572	1e-179
P54771	523	Tyrosine/DOPA decarboxyla	N/A	no	0.985	0.940	0.560	1e-176
Q06088	508	Tyrosine decarboxylase 4	N/A	no	0.989	0.972	0.584	1e-172
Q06087	516	Tyrosine decarboxylase 3	N/A	no	0.989	0.957	0.583	1e-171
Q06086	514	Tyrosine decarboxylase 2	N/A	no	0.989	0.961	0.578	1e-171
Q7XHL3	497	Tyrosine decarboxylase 1	yes	no	0.961	0.965	0.548	1e-171
Q8RY79	490	Tyrosine decarboxylase 1	yes	no	0.961	0.979	0.561	1e-167

>sp|P17770|DDC_CATRO Aromatic-L-amino-acid decarboxylase OS=Catharanthus roseus GN=TDC PE=2 SV=1

 Score =  722 bits (1863), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 340/500 (68%), Positives = 426/500 (85%), Gaps = 7/500 (1%)

Query: 1   MGSLDS-NMAESV----QFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLR 55
           MGS+DS N+A S     +FKPL+A+EFRKQAH+MVDFIADYY+N+E+YPVL++VEPG+LR
Sbjct: 1   MGSIDSTNVAMSNSPVGEFKPLEAEEFRKQAHRMVDFIADYYKNVETYPVLSEVEPGYLR 60

Query: 56  SALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFN 115
             +P++AP+ PE  + I+KD+Q+ IIPG+T+W+SPNF+AFFPATVS+A FLGEML    N
Sbjct: 61  KRIPETAPYLPEPLDDIMKDIQKDIIPGMTNWMSPNFYAFFPATVSSAAFLGEMLSTALN 120

Query: 116 SVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARD 175
           SVGF W++SPA+TELE++VMDWLA +LKLPK+FMFSGTGGGVIQNTTS+SIL T+IAAR+
Sbjct: 121 SVGFTWVSSPAATELEMIVMDWLAQILKLPKSFMFSGTGGGVIQNTTSESILCTIIAARE 180

Query: 176 RALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRR 235
           RAL+ +G +++ KLV YGSDQTH+ F K CKLAG+ P NIR +PT+V+ +F +SPQ+LR+
Sbjct: 181 RALEKLGPDSIGKLVCYGSDQTHTMFPKTCKLAGIYPNNIRLIPTTVETDFGISPQVLRK 240

Query: 236 AVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEF 295
            VE DV AG VPLFLCAT+GTTSTTA D V+ L+E+ANE+GIW+HVDAAYAGSACICPEF
Sbjct: 241 MVEDDVAAGYVPLFLCATLGTTSTTATDPVDSLSEIANEFGIWIHVDAAYAGSACICPEF 300

Query: 296 RHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355
           RHYL+GIERVDS S SPHKWLL+YLDC CLWVKQP LL++AL+T+PEYLKNK S+ + VV
Sbjct: 301 RHYLDGIERVDSLSLSPHKWLLAYLDCTCLWVKQPHLLLRALTTNPEYLKNKQSDLDKVV 360

Query: 356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415
           DFK+WQ+ TGR+F+SL+LW++LRSYGV+NLQSHIRSD+ + KMFE +V+SD RFEIVVPR
Sbjct: 361 DFKNWQIATGRKFRSLKLWLILRSYGVVNLQSHIRSDVAMGKMFEEWVRSDSRFEIVVPR 420

Query: 416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTD 475
           +F+LVCFRL   P   S   E +N+KLLD +NSTGRVY+THTIVGG+YMLR AVG+SLT+
Sbjct: 421 NFSLVCFRLK--PDVSSLHVEEVNKKLLDMLNSTGRVYMTHTIVGGIYMLRLAVGSSLTE 478

Query: 476 ERHVVAAWELIMEGADRLFK 495
           E HV   W+LI +  D L K
Sbjct: 479 EHHVRRVWDLIQKLTDDLLK 498

Catharanthus roseus (taxid: 4058)
EC: 4EC: .EC: 1EC: .EC: 1EC: .EC: 2EC: 8

>sp|P54769|TYDC2_PAPSO Tyrosine/DOPA decarboxylase 2 OS=Papaver somniferum GN=TYDC2 PE=2 SV=1

 Score =  636 bits (1641), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 293/518 (56%), Positives = 386/518 (74%), Gaps = 27/518 (5%)

Query: 1   MGSLDSN--MAESVQF---KPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLR 55
           MGSL++   +  S  F    PLD +EFR+Q H ++DF+ADYY+++E YPV +QVEPG+LR
Sbjct: 1   MGSLNTEDVLENSSAFGVTNPLDPEEFRRQGHMIIDFLADYYRDVEKYPVRSQVEPGYLR 60

Query: 56  SALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFN 115
             LP++AP+ PES ETIL+DV  +IIPG+THW SPN++A+FP++ S AGFLGEML   FN
Sbjct: 61  KRLPETAPYNPESIETILQDVTTEIIPGLTHWQSPNYYAYFPSSGSVAGFLGEMLSTGFN 120

Query: 116 SVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARD 175
            VGFNW++SPA+TELE VVMDW   ML LP++F+FSG+GGGV+Q T+ ++IL TL AARD
Sbjct: 121 VVGFNWMSSPAATELESVVMDWFGKMLNLPESFLFSGSGGGVLQGTSCEAILCTLTAARD 180

Query: 176 RALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRR 235
           R L+ +G E++ +LVVYGSDQTH    K  ++AG++P N RA+ T  + +F LS   LR 
Sbjct: 181 RKLNKIGREHIGRLVVYGSDQTHCALQKAAQVAGINPKNFRAIKTFKENSFGLSAATLRE 240

Query: 236 AVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEF 295
            +  D+EAGL+PLF+C TVGTTS+TAVD + P+ EVA EY +WVHVDAAYAGSACICPEF
Sbjct: 241 VILEDIEAGLIPLFVCPTVGTTSSTAVDPISPICEVAKEYEMWVHVDAAYAGSACICPEF 300

Query: 296 RHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355
           RH+++G+E  DSFS + HKW  + LDCCCLWVK P  LVKALST+PEYL+NK +ES  VV
Sbjct: 301 RHFIDGVEEADSFSLNAHKWFFTTLDCCCLWVKDPSALVKALSTNPEYLRNKATESRQVV 360

Query: 356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415
           D+KDWQ+   RRF+SL+LWMVLRSYGV NL++ +RS +++AK FEG +  D RFEI VPR
Sbjct: 361 DYKDWQIALSRRFRSLKLWMVLRSYGVTNLRNFLRSHVKMAKTFEGLICMDGRFEITVPR 420

Query: 416 HFALVCFRL----------NPYPHSGSADTEM------------LNRKLLDWVNSTGRVY 453
            FA+VCFRL          N    +G+    +            LN+  L+ VN+TG VY
Sbjct: 421 TFAMVCFRLLPPKTIKVYDNGVHQNGNGVVPLRDENENLVLANKLNQVYLETVNATGSVY 480

Query: 454 LTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491
           +TH +VGG+YM+RFAVG++LT+ERHV+ AW+++ E AD
Sbjct: 481 MTHAVVGGVYMIRFAVGSTLTEERHVIYAWKILQEHAD 518

Marginally higher substrate specificity for L-DOPA over L-tyrosine.

Papaver somniferum (taxid: 3469)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|P54770|TYDC3_PAPSO Tyrosine/DOPA decarboxylase 3 OS=Papaver somniferum GN=TYDC3 PE=2 SV=2

 Score =  634 bits (1634), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 294/520 (56%), Positives = 386/520 (74%), Gaps = 29/520 (5%)

Query: 1   MGSLDSN--MAESVQF---KPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLR 55
           MGSL++   +  S  F    PLD +EFR+Q H ++DF+ADYY+++E YPV +QVEPG+LR
Sbjct: 1   MGSLNTEDVLEHSSAFGATNPLDPEEFRRQGHMIIDFLADYYRDVEKYPVRSQVEPGYLR 60

Query: 56  SALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFN 115
             LP++AP+ PES ETIL+DV  +IIPG+THW SPN++A+FP++ S AGFLGEML   FN
Sbjct: 61  KRLPETAPYNPESIETILQDVTSEIIPGLTHWQSPNYYAYFPSSGSVAGFLGEMLSTGFN 120

Query: 116 SVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARD 175
            VGFNW++SPA+TELE +VMDW   ML LPK+++FSGTGGGV+Q TT ++IL TL AARD
Sbjct: 121 VVGFNWMSSPAATELEGIVMDWFGKMLNLPKSYLFSGTGGGVLQGTTCEAILCTLTAARD 180

Query: 176 RALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRR 235
           R L+ +G E++ +LVVYGSDQTH    K  ++AG++P N RA+ T    +F L+   LR 
Sbjct: 181 RKLNKIGREHIGRLVVYGSDQTHCALQKAAQIAGINPKNFRAVKTFKANSFGLAASTLRE 240

Query: 236 AVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEF 295
            +  D+EAGL+PLF+C TVGTTS+TAVD + P+ EVA EY +WVH+DAAYAGSACICPEF
Sbjct: 241 VILEDIEAGLIPLFVCPTVGTTSSTAVDPIGPICEVAKEYEMWVHIDAAYAGSACICPEF 300

Query: 296 RHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355
           RH+++G+E  DSFS + HKW  + LDCCCLWVK P  LVKALST+PEYL+NK +ES  VV
Sbjct: 301 RHFIDGVEEADSFSLNAHKWFFTTLDCCCLWVKDPSSLVKALSTNPEYLRNKATESRQVV 360

Query: 356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415
           D+KDWQ+   RRF+S++LWMVLRSYGV NL++ +RS +R+AK FEG V +D RFEI VPR
Sbjct: 361 DYKDWQIALIRRFRSMKLWMVLRSYGVTNLRNFLRSHVRMAKTFEGLVGADRRFEITVPR 420

Query: 416 HFALVCFRL-----------NPYPHSGSA--------DTEM-----LNRKLLDWVNSTGR 451
            FA+VCFRL           N    +G+         + E+     LN+  L  V +TG 
Sbjct: 421 TFAMVCFRLLPPTTVKVCGENGVHQNGNGVIAVLRNENEELVLANKLNQVYLRQVKATGS 480

Query: 452 VYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD 491
           VY+TH +VGG+YM+RFAVG++LT+ERHV+ AWE++ E AD
Sbjct: 481 VYMTHAVVGGVYMIRFAVGSTLTEERHVIHAWEVLQEHAD 520

Marginally higher substrate specificity for L-DOPA over L-tyrosine.

Papaver somniferum (taxid: 3469)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|P54768|TYDC1_PAPSO Tyrosine/DOPA decarboxylase 1 OS=Papaver somniferum GN=TYDC1 PE=2 SV=1

 Score =  628 bits (1620), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 292/510 (57%), Positives = 380/510 (74%), Gaps = 16/510 (3%)

Query: 1   MGSLDSNMAESVQF---KPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSA 57
           MGSL +N  ES+      PLD  EFR+Q H ++DF+ADYY+N+E YPV TQV+PG+L+  
Sbjct: 1   MGSLPANNFESMSLCSQNPLDPDEFRRQGHMIIDFLADYYKNVEKYPVRTQVDPGYLKKR 60

Query: 58  LPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSV 117
           LP+SAP+ PES ETIL+DV   IIPG+THW SPN+FA+FP++ S AGFLGEML   FN V
Sbjct: 61  LPESAPYNPESIETILEDVTNDIIPGLTHWQSPNYFAYFPSSGSIAGFLGEMLSTGFNVV 120

Query: 118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGG----VIQNTTSDSILVTLIAA 173
           GFNW++SPA+TELE +VM+WL  ML LPK+F+FS  G      V+Q TT ++IL TL AA
Sbjct: 121 GFNWMSSPAATELESIVMNWLGQMLTLPKSFLFSSDGSSGGGGVLQGTTCEAILCTLTAA 180

Query: 174 RDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLL 233
           RD+ L+ +G EN++KLVVY SDQT S   K  ++AG++P N  A+ TS   NF LSP  L
Sbjct: 181 RDKMLNKIGRENINKLVVYASDQTLSALQKAAQIAGINPKNFLAIATSKATNFGLSPNSL 240

Query: 234 RRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICP 293
           +  + AD+E+GLVPLFLCATVGTTS+TAVD + PL  VA  +GIWVH+DAAYAGSACICP
Sbjct: 241 QSTILADIESGLVPLFLCATVGTTSSTAVDPIGPLCAVAKLHGIWVHIDAAYAGSACICP 300

Query: 294 EFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS 353
           EFRH+++G+E  DSFS + HKW  + LDCCCLWVK    LVKALST PEYLKNK ++S  
Sbjct: 301 EFRHFIDGVEDADSFSLNAHKWFFTTLDCCCLWVKDSDSLVKALSTSPEYLKNKATDSKQ 360

Query: 354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413
           V+D+KDWQ+   RRF+S++LW+VLRSYG+ NL++ +RS +++AK F+G +  D RFEIVV
Sbjct: 361 VIDYKDWQIALSRRFRSMKLWLVLRSYGIANLRTFLRSHVKMAKHFQGLIGMDNRFEIVV 420

Query: 414 PRHFALVCFRLNPYP---------HSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYM 464
           PR FA+VCFRL P               A T  +N KLL+ VN++G++Y+TH +VGG+YM
Sbjct: 421 PRTFAMVCFRLKPAAIFRKKIVEDDHIEAQTNEVNAKLLESVNASGKIYMTHAVVGGVYM 480

Query: 465 LRFAVGASLTDERHVVAAWELIMEGADRLF 494
           +RFAVGA+LT+ERHV  AW+++ E  D + 
Sbjct: 481 IRFAVGATLTEERHVTGAWKVVQEHTDAIL 510

Marginally higher substrate specificity for L-DOPA over L-tyrosine.

Papaver somniferum (taxid: 3469)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|P54771|TYDC5_PAPSO Tyrosine/DOPA decarboxylase 5 OS=Papaver somniferum GN=TYDC5 PE=2 SV=1

 Score =  619 bits (1597), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 289/516 (56%), Positives = 378/516 (73%), Gaps = 24/516 (4%)

Query: 1   MGSLDSNMAESVQF---KPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSA 57
           MGSL ++  ES+      PLD  EFR+Q H ++DF+ADYY+N++     +Q  PG  +  
Sbjct: 1   MGSLPTDNLESMSICSQNPLDPDEFRRQGHMIIDFLADYYKNVK-VSSRSQANPGS-QQT 58

Query: 58  LPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSV 117
           LP++AP+  ES ETIL+DVQ  IIPGITHW SPN+FA+FP++ S AGFLGEML + FN V
Sbjct: 59  LPETAPNHSESIETILQDVQNDIIPGITHWQSPNYFAYFPSSGSVAGFLGEMLSSGFNVV 118

Query: 118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSG------TGGGVIQNTTSDSILVTLI 171
           GFNW++SPA+TELE +VM+WL  ML LPK+F+FS       +GGGV+Q TT ++IL TL 
Sbjct: 119 GFNWMSSPAATELESIVMNWLGQMLNLPKSFLFSSDDNAGSSGGGVLQGTTCEAILCTLT 178

Query: 172 AARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQ 231
           A+RD+ L+ +G EN++KLVVY SDQTH    K  ++AG++P N RA+ TS   +F LSPQ
Sbjct: 179 ASRDKMLNKIGRENINKLVVYASDQTHCALQKAAQIAGINPKNFRAIATSKATDFGLSPQ 238

Query: 232 LLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACI 291
            L   + AD+E+GLVPLFLCATVGTTS+TAVD + PL EVA ++GIWVHVDAAYAGSACI
Sbjct: 239 ALLSTILADIESGLVPLFLCATVGTTSSTAVDPIGPLCEVAKQFGIWVHVDAAYAGSACI 298

Query: 292 CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSES 351
           CPEFRH+++G+E  DSFS + HKW  + LDCCCLWVK    LVKALST PEYLKNK ++S
Sbjct: 299 CPEFRHFIDGVEEADSFSLNAHKWFFTTLDCCCLWVKDSNALVKALSTSPEYLKNKATDS 358

Query: 352 NSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI 411
             V+D+KDWQ+   RRF+S++LW+VLRSYGV NL+S +RS +++AK F+G +  D RFEI
Sbjct: 359 KQVIDYKDWQIALSRRFRSMKLWLVLRSYGVANLRSFLRSHVKMAKHFDGLIAMDKRFEI 418

Query: 412 VVPRHFALVCFRLNPYP-------------HSGSADTEMLNRKLLDWVNSTGRVYLTHTI 458
           VVP  FA+VCFRL P               +     T  +N KLL+ VN++G +Y+TH +
Sbjct: 419 VVPNTFAMVCFRLKPAAIFNGKLGENGVDYNCIEEKTNEINSKLLESVNASGSIYMTHAV 478

Query: 459 VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF 494
           VGG+YM+RFAVGA+LT+ERHV  AW++I E  D + 
Sbjct: 479 VGGVYMIRFAVGATLTEERHVSMAWKVIQEHTDAIL 514

May play an important role in providing precursors for alkaloid synthesis in the roots and germinating seedlings.

Papaver somniferum (taxid: 3469)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q06088|TYDC4_PETCR Tyrosine decarboxylase 4 OS=Petroselinum crispum GN=TYRDC-4 PE=2 SV=1

 Score =  605 bits (1561), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 293/501 (58%), Positives = 379/501 (75%), Gaps = 7/501 (1%)

Query: 1   MGSLDSNMAESV--QF--KPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRS 56
           MGS+D+ MA+ +  QF    L+ +EFR+Q H M+DF+ADYY+ +E+YPV +QV PG+LR 
Sbjct: 1   MGSIDNLMAQKLTSQFPMNTLEPEEFRRQGHLMIDFLADYYRKVENYPVRSQVSPGYLRE 60

Query: 57  ALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNS 116
            LP+SAP+ PES ETIL+DVQ KIIPGITHW SPNFFA+FP++ STAGFLGEML   FN 
Sbjct: 61  ILPESAPYNPESLETILQDVQTKIIPGITHWQSPNFFAYFPSSGSTAGFLGEMLSTGFNV 120

Query: 117 VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDR 176
           VGFNW+ SPA+TELE VV DW   ML+LPK+F+FSG GGGV+Q TT ++IL TL+AARD+
Sbjct: 121 VGFNWMVSPAATELENVVTDWFGKMLQLPKSFLFSGGGGGVLQGTTCEAILCTLVAARDK 180

Query: 177 ALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRA 236
            L   G +N+ KLVVY SDQTHS   K  K+AG+ P N RA+ T+  +NF L P+ L  A
Sbjct: 181 NLRQHGMDNIGKLVVYCSDQTHSALQKAAKIAGIDPKNFRAIETTKSSNFKLCPKRLESA 240

Query: 237 VEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFR 296
           +  D++ GL+PL+LCATVGTTS+T VD +  L EVA +Y +WVHVDAAYAGSACICPEFR
Sbjct: 241 ILYDLQNGLIPLYLCATVGTTSSTTVDPLPALTEVAKKYDLWVHVDAAYAGSACICPEFR 300

Query: 297 HYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356
            YL+G+E  DSFS + HKW L+ LDCCCLWV+ P  L+K+LST PE+LKN  SE+N VVD
Sbjct: 301 QYLDGVENADSFSLNAHKWFLTTLDCCCLWVRDPSALIKSLSTYPEFLKNNASETNKVVD 360

Query: 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH 416
           +KDWQ+   RRF++L+LW VLRSYGV  L+  IR  + +AK FEG V  D RFE+V PR 
Sbjct: 361 YKDWQIMLSRRFRALKLWFVLRSYGVGQLREFIRGHVGMAKYFEGLVGLDKRFEVVAPRL 420

Query: 417 FALVCFRLNPYPHSGSADTE---MLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASL 473
           F++VCFR+ P    G  D +    +NRKLL+ VN +GR+Y++HT++GG+Y++RFA+G +L
Sbjct: 421 FSMVCFRIKPSAMIGKNDEDEVNEINRKLLESVNDSGRIYVSHTVLGGIYVIRFAIGGTL 480

Query: 474 TDERHVVAAWELIMEGADRLF 494
           TD  HV AAW+++ + AD L 
Sbjct: 481 TDINHVSAAWKVLQDHADALL 501

Petroselinum crispum (taxid: 4043)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q06087|TYDC3_PETCR Tyrosine decarboxylase 3 OS=Petroselinum crispum GN=TYRDC-3 PE=2 SV=1

 Score =  603 bits (1554), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 293/502 (58%), Positives = 377/502 (75%), Gaps = 8/502 (1%)

Query: 1   MGSLDSNMAE---SVQF--KPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLR 55
           MGS+D+  A+   S QF    L+ +EFR+Q H M+DF+ADYY+ +E+YPV +QV PG+LR
Sbjct: 1   MGSIDNLTAQKLTSSQFPMNTLEPEEFRRQGHLMIDFLADYYRKVENYPVRSQVSPGYLR 60

Query: 56  SALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFN 115
             LP+SAP+ PES ETIL+DVQ KIIPGITHW SPNFFA+FP++ STAGFLGEML   FN
Sbjct: 61  EILPESAPYNPESLETILQDVQTKIIPGITHWQSPNFFAYFPSSGSTAGFLGEMLSTGFN 120

Query: 116 SVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARD 175
            VGFNW+ SPA+TELE VV DW   ML+LPK+F+FSG GGGV+Q TT ++IL TL+AARD
Sbjct: 121 VVGFNWMVSPAATELENVVTDWFGKMLQLPKSFLFSGGGGGVLQGTTCEAILCTLVAARD 180

Query: 176 RALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRR 235
           + L   G +N+ KLVVY SDQTHS   K  K+AG+ P N RA+ T+  +NF L P+ L  
Sbjct: 181 KNLRQHGMDNIGKLVVYCSDQTHSALQKAAKIAGIDPKNFRAIETTKSSNFKLCPKRLES 240

Query: 236 AVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEF 295
           A+  D++ GL+PL+LCATVGTTS+T VD +  L EVA +Y +WVHVDAAYAGSACICPEF
Sbjct: 241 AILYDLQNGLIPLYLCATVGTTSSTTVDPLPALTEVAKKYDLWVHVDAAYAGSACICPEF 300

Query: 296 RHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355
           R YL+G+E  DSFS + HKW L+ LDCCCLWV+ P  L+K+LST PE+LKN  SE+N VV
Sbjct: 301 RQYLDGVENADSFSLNAHKWFLTTLDCCCLWVRDPSALIKSLSTYPEFLKNNASETNKVV 360

Query: 356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415
           D+KDWQ+   RRF++L+LW VLRSYGV  L+  IR  + +AK FEG V  D RFE+V PR
Sbjct: 361 DYKDWQIMLSRRFRALKLWFVLRSYGVGQLREFIRGHVGMAKYFEGLVGLDKRFEVVAPR 420

Query: 416 HFALVCFRLNPYPHSGSAD---TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGAS 472
            F++VCFR+ P    G  D      +NRKLL+ VN +GR+Y++HT++GG+Y++RFA+G +
Sbjct: 421 LFSMVCFRIKPSAMIGKNDENEVNEINRKLLESVNDSGRIYVSHTVLGGIYVIRFAIGGT 480

Query: 473 LTDERHVVAAWELIMEGADRLF 494
           LTD  HV AAW+++ + AD L 
Sbjct: 481 LTDINHVSAAWKVLQDHADALL 502

Petroselinum crispum (taxid: 4043)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q06086|TYDC2_PETCR Tyrosine decarboxylase 2 OS=Petroselinum crispum GN=TYRDC-2 PE=2 SV=1

 Score =  603 bits (1554), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 289/500 (57%), Positives = 374/500 (74%), Gaps = 6/500 (1%)

Query: 1   MGSLDS---NMAESVQFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSA 57
           MGS+D+    +A       L+ +EFR+Q H M+DF+ADYY+ +E+YPV +QV PG+LR  
Sbjct: 1   MGSIDNLTEKLASQFPMNTLEPEEFRRQGHMMIDFLADYYRKVENYPVRSQVSPGYLREI 60

Query: 58  LPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSV 117
           LP+SAP+ PES ETIL+DVQ KIIPGITHW SPNFFA+FP++ STAGFLGEML   FN V
Sbjct: 61  LPESAPYNPESLETILQDVQTKIIPGITHWQSPNFFAYFPSSGSTAGFLGEMLSTGFNVV 120

Query: 118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRA 177
           GFNW+ SPA+TELE VV DW   ML+LPK+F+FSG GGGV+Q TT ++IL TL+AARD+ 
Sbjct: 121 GFNWMVSPAATELENVVTDWFGKMLQLPKSFLFSGGGGGVLQGTTCEAILCTLVAARDKN 180

Query: 178 LDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAV 237
           L   G +N+ KLVVY SDQTHS   K  K+AG+ P N RA+ T+  +NF L P+ L  A+
Sbjct: 181 LRQHGMDNIGKLVVYCSDQTHSALQKAAKIAGIDPKNFRAIETTKSSNFQLCPKRLESAI 240

Query: 238 EADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH 297
             D++ GL+PL+LCATVGTTS+T VD +  L EVA +Y +WVHVDAAYAGSACICPEFR 
Sbjct: 241 LHDLQNGLIPLYLCATVGTTSSTTVDPLPALTEVAKKYDLWVHVDAAYAGSACICPEFRQ 300

Query: 298 YLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF 357
           YL+G+E  DSFS + HKW L+ LDCCCLWV+ P  L+K+LST PE+LKN  SE+N VVD+
Sbjct: 301 YLDGVENADSFSLNAHKWFLTTLDCCCLWVRNPSALIKSLSTYPEFLKNNASETNKVVDY 360

Query: 358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHF 417
           KDWQ+   RRF++L+LW VLRSYGV  L+  IR  + +AK FEG V  D RFE+V PR F
Sbjct: 361 KDWQIMLSRRFRALKLWFVLRSYGVGQLREFIRGHVGMAKYFEGLVNMDKRFEVVAPRLF 420

Query: 418 ALVCFRLNPYPHSGSADTE---MLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLT 474
           ++VCFR+ P    G  D +    +NRKLL+ VN +GR+Y++HT++GG+Y++RFA+G +LT
Sbjct: 421 SMVCFRIKPSAMIGKNDEDEVNEINRKLLESVNDSGRIYVSHTVLGGIYVIRFAIGGTLT 480

Query: 475 DERHVVAAWELIMEGADRLF 494
           D  HV AAW+++ + A  L 
Sbjct: 481 DINHVSAAWKVLQDHAGALL 500

Petroselinum crispum (taxid: 4043)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q7XHL3|TYDC1_ORYSJ Tyrosine decarboxylase 1 OS=Oryza sativa subsp. japonica GN=Os07g0437500 PE=2 SV=1

 Score =  602 bits (1553), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 264/481 (54%), Positives = 370/481 (76%), Gaps = 1/481 (0%)

Query: 14  FKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETIL 73
            +P+DA++ R+  H+MVDF+ADYY++IE++PVL+QV+PG+L+  LPDSAP +P++ +++ 
Sbjct: 14  LRPMDAEQLRECGHRMVDFVADYYKSIEAFPVLSQVQPGYLKEVLPDSAPRQPDTLDSLF 73

Query: 74  KDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIV 133
            D+Q+KIIPG+THW SPN+FA++P+  STAGFLGEML A FN VGF+W+ SPA+TELE++
Sbjct: 74  DDIQQKIIPGVTHWQSPNYFAYYPSNSSTAGFLGEMLSAAFNIVGFSWITSPAATELEVI 133

Query: 134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYG 193
           V+DW A ML+LP  F+ +  GGGVIQ T S+++LV L+AARDRAL   G  ++ KLVVY 
Sbjct: 134 VLDWFAKMLQLPSQFLSTALGGGVIQGTASEAVLVALLAARDRALKKHGKHSLEKLVVYA 193

Query: 194 SDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCAT 253
           SDQTHS   K C++AG+   N+R +    + N++++P+ +  A+  D+ +GL+P F+CAT
Sbjct: 194 SDQTHSALQKACQIAGIFSENVRVVIADCNKNYAVAPEAVSEALSIDLSSGLIPFFICAT 253

Query: 254 VGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPH 313
           VGTTS++AVD +  L ++A    +W H+DAAYAGSACICPE+RH+LNG+E  DSF+ + H
Sbjct: 254 VGTTSSSAVDPLPELGQIAKSNDMWFHIDAAYAGSACICPEYRHHLNGVEEADSFNMNAH 313

Query: 314 KWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRL 373
           KW L+  DC  LWVK    L+++LST+PE+LKNK S++NSVVDFKDWQ+  GRRF+SL+L
Sbjct: 314 KWFLTNFDCSLLWVKDRSFLIQSLSTNPEFLKNKASQANSVVDFKDWQIPLGRRFRSLKL 373

Query: 374 WMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSA 433
           WMVLR YGV NLQS+IR  I LA+ FE  + SD RFE+V PR F+LVCFRL P P S   
Sbjct: 374 WMVLRLYGVDNLQSYIRKHIHLAEHFEQLLLSDSRFEVVTPRTFSLVCFRLVP-PTSDHE 432

Query: 434 DTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493
           +   LN  ++D VNS+G+++L+HT++ G ++LRFAVGA LT+ERHV AAW+L+ + A ++
Sbjct: 433 NGRKLNYDMMDGVNSSGKIFLSHTVLSGKFVLRFAVGAPLTEERHVDAAWKLLRDEATKV 492

Query: 494 F 494
            
Sbjct: 493 L 493

Oryza sativa subsp. japonica (taxid: 39947)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

>sp|Q8RY79|TYDC1_ARATH Tyrosine decarboxylase 1 OS=Arabidopsis thaliana GN=ELI5 PE=2 SV=1

 Score =  588 bits (1516), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 270/481 (56%), Positives = 352/481 (73%), Gaps = 1/481 (0%)

Query: 14  FKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETIL 73
            KP+D+++ R+  H MVDFIADYY+ IE +PVL+QV+PG+L   LPDSAP  PE+ + +L
Sbjct: 9   LKPMDSEQLREYGHLMVDFIADYYKTIEDFPVLSQVQPGYLHKLLPDSAPDHPETLDQVL 68

Query: 74  KDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIV 133
            DV+ KI+PG+THW SP+FFA++P+  S AGFLGEML A    VGF+W+ SPA+TELE++
Sbjct: 69  DDVRAKILPGVTHWQSPSFFAYYPSNSSVAGFLGEMLSAGLGIVGFSWVTSPAATELEMI 128

Query: 134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYG 193
           V+DW+A +L LP+ FM  G GGGVIQ + S+++LV LIAARD+ L +VG   + KLVVY 
Sbjct: 129 VLDWVAKLLNLPEQFMSKGNGGGVIQGSASEAVLVVLIAARDKVLRSVGKNALEKLVVYS 188

Query: 194 SDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCAT 253
           SDQTHS   K C++AG+ P N R L T    N++L P+ L+ AV  D+EAGL+P FLCA 
Sbjct: 189 SDQTHSALQKACQIAGIHPENCRVLTTDSSTNYALRPESLQEAVSRDLEAGLIPFFLCAN 248

Query: 254 VGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPH 313
           VGTTS+TAVD +  L ++AN  GIW HVDAAYAGSACICPE+R Y++G+E  DSF+ + H
Sbjct: 249 VGTTSSTAVDPLAALGKIANSNGIWFHVDAAYAGSACICPEYRQYIDGVETADSFNMNAH 308

Query: 314 KWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRL 373
           KW L+  DC  LWVK    L  ALST+PE+LKNK S++N VVD+KDWQ+  GRRF+SL+L
Sbjct: 309 KWFLTNFDCSLLWVKDQDSLTLALSTNPEFLKNKASQANLVVDYKDWQIPLGRRFRSLKL 368

Query: 374 WMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSA 433
           WMVLR YG   L+S+IR+ I+LAK FE  V  DP FEIV PR FALVCFRL P       
Sbjct: 369 WMVLRLYGSETLKSYIRNHIKLAKEFEQLVSQDPNFEIVTPRIFALVCFRLVPVKDE-EK 427

Query: 434 DTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493
                NR+LLD VNS+G+++++HT + G  +LR A+GA LT+E+HV  AW++I E A  L
Sbjct: 428 KCNNRNRELLDAVNSSGKLFMSHTALSGKIVLRCAIGAPLTEEKHVKEAWKIIQEEASYL 487

Query: 494 F 494
            
Sbjct: 488 L 488

Arabidopsis thaliana (taxid: 3702)

EC: 4

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	499
1763279	498	tryptophan decarboxylase [Camptotheca ac	0.989	0.991	0.766	0.0
1763277	502	tryptophan decarboxylase [Camptotheca ac	0.991	0.986	0.744	0.0
224713825	503	tryptophan decarboxylase [Capsicum annuu	0.993	0.986	0.714	0.0
349606019	506	tryptophan decarboxylase [Mitragyna spec	0.991	0.978	0.710	0.0
291059159	499	L-tryptophan decarboxylase [Actaea racem	0.987	0.987	0.705	0.0
374085876	499	tryptophan decarboxylase [Tabernaemontan	0.985	0.985	0.696	0.0
291059161	497	L-tryptophan decarboxylase [Actaea racem	0.987	0.991	0.701	0.0
421999454	481	tryptophan decarboxylase, partial [Actae	0.959	0.995	0.705	0.0
374085878	501	tryptophan decarboxylase [Vinca minor]	0.985	0.982	0.681	0.0
145839453	499	tryptophan decarboxylase [Rauvolfia vert	0.985	0.985	0.676	0.0

>gi|1763279|gb|AAB39709.1| tryptophan decarboxylase [Camptotheca acuminata]

 Score =  816 bits (2108), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/496 (76%), Positives = 440/496 (88%), Gaps = 2/496 (0%)

Query: 1   MGSLDSNM-AESV-QFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSAL 58
           MGS+DSN   ES  Q +PL+ +EFRKQAHQMVDFIADYY+NIESYPVL+QVEPG+L+S L
Sbjct: 1   MGSIDSNYDTESAGQCRPLEPEEFRKQAHQMVDFIADYYKNIESYPVLSQVEPGYLQSRL 60

Query: 59  PDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVG 118
           P++AP+RPE FE+ILKDV + IIPG+THWLSPNFFA+FPATVS+A F+GEMLC CFN+VG
Sbjct: 61  PETAPYRPEPFESILKDVHKDIIPGVTHWLSPNFFAYFPATVSSAAFVGEMLCTCFNAVG 120

Query: 119 FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRAL 178
           FNWLASPA  ELE+VVMDWLA+MLKLP +F F GTGGGVIQ TTS++IL TLIAARDRAL
Sbjct: 121 FNWLASPAELELEMVVMDWLASMLKLPNSFTFLGTGGGVIQGTTSEAILCTLIAARDRAL 180

Query: 179 DAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVE 238
           +++G +++HKLVVYGSDQTHST+AK C LAG+ P NIR++ T   ANFSLSP  L R +E
Sbjct: 181 ESIGVDSIHKLVVYGSDQTHSTYAKACNLAGILPCNIRSIRTEAVANFSLSPDSLHREIE 240

Query: 239 ADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY 298
           ADV AG+VPL+LCATVGTTSTTA+D++ PLA+VAN+YG+W HVDAAYAGSACICPEFRHY
Sbjct: 241 ADVAAGMVPLYLCATVGTTSTTAIDSLSPLADVANDYGLWFHVDAAYAGSACICPEFRHY 300

Query: 299 LNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK 358
           L+GIER DS S SPHKWLLSYLDCCCLWVK+P +LVKALSTDPEYLKNKPSESNSVVDFK
Sbjct: 301 LDGIERADSLSLSPHKWLLSYLDCCCLWVKRPSVLVKALSTDPEYLKNKPSESNSVVDFK 360

Query: 359 DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA 418
           DWQVGTGRRFK+LRLW V+RSYGV NLQSHIRSDI++AKMFE FV SDPRFEIVVPR F+
Sbjct: 361 DWQVGTGRRFKALRLWFVMRSYGVANLQSHIRSDIQMAKMFEEFVNSDPRFEIVVPRVFS 420

Query: 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERH 478
           LVCFRLNP+  S   +TE+LNRKLL+WVNSTG+VY+THT VGG+YMLRFAVGA+LT+E H
Sbjct: 421 LVCFRLNPFSKSDPCNTELLNRKLLEWVNSTGQVYITHTKVGGVYMLRFAVGATLTEEHH 480

Query: 479 VVAAWELIMEGADRLF 494
           V AAW+LI EGAD L 
Sbjct: 481 VSAAWKLIREGADALL 496

Source: Camptotheca acuminata

Species: Camptotheca acuminata

Genus: Camptotheca

Family: Cornaceae

Order: Cornales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|1763277|gb|AAB39708.1| tryptophan decarboxylase [Camptotheca acuminata]

 Score =  796 bits (2055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/500 (74%), Positives = 429/500 (85%), Gaps = 5/500 (1%)

Query: 1   MGSLDSNM-----AESVQFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLR 55
           MGSLDSN      A   QF PLD +EFRKQAH +VDFIADYY+NIESYPVL+QV+PG+  
Sbjct: 1   MGSLDSNYDTESPASVGQFNPLDPEEFRKQAHCIVDFIADYYKNIESYPVLSQVDPGYRH 60

Query: 56  SALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFN 115
           S L  +AP+R E FE+ILKDVQ+ IIPG+THW+SPNFFA FPATVS+A F+GEMLC CFN
Sbjct: 61  SRLGKNAPYRSEPFESILKDVQKDIIPGMTHWMSPNFFAHFPATVSSAAFVGEMLCTCFN 120

Query: 116 SVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARD 175
           SVGFNWLASPA+TELE+VV+DWLA MLKLPK+FMFSGTGGGV+Q TTS++IL TLIAA  
Sbjct: 121 SVGFNWLASPAATELEMVVIDWLANMLKLPKSFMFSGTGGGVLQGTTSEAILCTLIAASP 180

Query: 176 RALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRR 235
              + VG +     VVYGSDQTHST+AK CKLAG+ P NIR++PT+ D+NFS+SP LLRR
Sbjct: 181 MHFEIVGVKTSTSFVVYGSDQTHSTYAKACKLAGILPCNIRSIPTTADSNFSVSPLLLRR 240

Query: 236 AVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEF 295
           A+EAD  AG+VPL++CATVGTTSTTA+D +  LA+VAN+YG+W HVDAAYAGSACICPEF
Sbjct: 241 AIEADKAAGMVPLYICATVGTTSTTAIDPLSSLADVANDYGVWFHVDAAYAGSACICPEF 300

Query: 296 RHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355
           RHYL+GIER DS S SPHKWLLSYLDCCCLWVK P LLVKALSTDPEYLKN+PSES SVV
Sbjct: 301 RHYLDGIERADSLSLSPHKWLLSYLDCCCLWVKSPSLLVKALSTDPEYLKNQPSESKSVV 360

Query: 356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415
           D+KDWQVGTGRRFK+LRLW V+RSYGV NLQSHIR+D+++AKMFEGFVKSDPRFEI+VPR
Sbjct: 361 DYKDWQVGTGRRFKALRLWFVMRSYGVANLQSHIRTDVQMAKMFEGFVKSDPRFEILVPR 420

Query: 416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTD 475
            F+LVCFRLNP   S    TE LNRKLLDWVNSTGRVY+THT VGG+YMLRFAVGA+LT+
Sbjct: 421 VFSLVCFRLNPISGSDPTGTEALNRKLLDWVNSTGRVYMTHTKVGGIYMLRFAVGATLTE 480

Query: 476 ERHVVAAWELIMEGADRLFK 495
           +RHV +AW+LI EGAD L K
Sbjct: 481 KRHVSSAWKLIKEGADVLLK 500

Source: Camptotheca acuminata

Species: Camptotheca acuminata

Genus: Camptotheca

Family: Cornaceae

Order: Cornales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224713825|gb|ACN62127.1| tryptophan decarboxylase [Capsicum annuum]

 Score =  781 bits (2016), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/501 (71%), Positives = 427/501 (85%), Gaps = 5/501 (0%)

Query: 1   MGSLDSNMAESVQ-----FKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLR 55
           MGSLDSN +   Q     F PLD +EFR QAHQMVDFIADYY+NIESYPVL+QVEPG+LR
Sbjct: 1   MGSLDSNNSTQTQSNVTKFNPLDPEEFRTQAHQMVDFIADYYKNIESYPVLSQVEPGYLR 60

Query: 56  SALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFN 115
           + LP++AP+ PES +TI+KDV++ IIPG+THWLSPNFFAFFPATVS+A FLGEMLC CFN
Sbjct: 61  NHLPENAPYLPESLDTIMKDVEKHIIPGMTHWLSPNFFAFFPATVSSAAFLGEMLCNCFN 120

Query: 116 SVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARD 175
           SVGFNWLASPA TELE+++MDWLA MLKLP+ FMFSGTGGGVIQ TTS++IL TLIAARD
Sbjct: 121 SVGFNWLASPAMTELEMIIMDWLANMLKLPECFMFSGTGGGVIQGTTSEAILCTLIAARD 180

Query: 176 RALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRR 235
           R L+ +G +N+ KLVVYGSDQTHS +AK CK AG+ P NIRA+ T V+ +FSLSP +LR 
Sbjct: 181 RKLENIGVDNIGKLVVYGSDQTHSMYAKACKAAGIFPCNIRAISTCVENDFSLSPAVLRG 240

Query: 236 AVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEF 295
            VE DV AGLVPLFLCATVGTTSTTA+D +  L E+ANE+ IW+HVDAAY GSACICPEF
Sbjct: 241 IVEVDVAAGLVPLFLCATVGTTSTTAIDPISELGELANEFDIWLHVDAAYGGSACICPEF 300

Query: 296 RHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355
           R YL+GIER +SFS SPHKWLLSYLDCCC+WVK+P +LVKALST+PEYL+NK SE  SVV
Sbjct: 301 RQYLDGIERANSFSLSPHKWLLSYLDCCCMWVKEPSVLVKALSTNPEYLRNKRSEHGSVV 360

Query: 356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415
           D+KDWQ+GTGR+FKSLRLW+++RSYGV NLQSHIRSD+R+AKMFEG V+SDP FE++VPR
Sbjct: 361 DYKDWQIGTGRKFKSLRLWLIMRSYGVANLQSHIRSDVRMAKMFEGLVRSDPYFEVIVPR 420

Query: 416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTD 475
            F+LVCFR NP      A TE+LN++LLD VNSTGRVY+THT+ GG+YMLRFAVGA+ T+
Sbjct: 421 RFSLVCFRFNPDKEYEPAYTELLNKRLLDNVNSTGRVYMTHTVAGGIYMLRFAVGATFTE 480

Query: 476 ERHVVAAWELIMEGADRLFKG 496
           +RH++ AW+LI + AD L + 
Sbjct: 481 DRHLICAWKLIKDCADALLRN 501

Source: Capsicum annuum

Species: Capsicum annuum

Genus: Capsicum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|349606019|gb|AEQ01059.1| tryptophan decarboxylase [Mitragyna speciosa]

 Score =  747 bits (1929), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/501 (71%), Positives = 427/501 (85%), Gaps = 6/501 (1%)

Query: 1   MGSLDSNMAES------VQFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFL 54
           MGS+D++  ++        FKPLD  EFRKQAH+MVDFIADYY+NIE+YPVL+QVEPG+L
Sbjct: 1   MGSIDTSDGDAYANSAVAPFKPLDPDEFRKQAHRMVDFIADYYKNIENYPVLSQVEPGYL 60

Query: 55  RSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACF 114
           R+ L  +AP+ PE FE IL+D+Q+ IIPG+T+WLSPNFFAFFPATVS+A FLGEMLC  F
Sbjct: 61  RTQLSQTAPYLPEPFENILQDIQKDIIPGMTNWLSPNFFAFFPATVSSAAFLGEMLCTGF 120

Query: 115 NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAAR 174
           NSVGFNWLASPA+TELE+VVMDWLA MLKLPK+FMFSGTGGGV+Q TTS++IL T+IAAR
Sbjct: 121 NSVGFNWLASPAATELEMVVMDWLANMLKLPKSFMFSGTGGGVLQGTTSEAILCTIIAAR 180

Query: 175 DRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLR 234
           DRA + +G EN+ KLVVY SDQTHS F K CKLAG+ P NIR +PT+ D NFS+SP  LR
Sbjct: 181 DRAFEKIGVENIGKLVVYASDQTHSFFVKTCKLAGIFPCNIRIIPTTADDNFSMSPDALR 240

Query: 235 RAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPE 294
           + +EADVE GLVPLF+CATVGTTSTTA+D V  LA+VAN++ +W+HVDAAYAGSACICPE
Sbjct: 241 KQIEADVEDGLVPLFICATVGTTSTTAIDPVSELADVANDFNVWIHVDAAYAGSACICPE 300

Query: 295 FRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV 354
           FR YL+GIERVDS S SPHKWLL YLDCCCLWVK+  LLVKAL+T+PEYL+NK SE +SV
Sbjct: 301 FRQYLDGIERVDSLSLSPHKWLLCYLDCCCLWVKKTDLLVKALATNPEYLRNKRSEFDSV 360

Query: 355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP 414
           VD+KDWQ+GTG+RF++LRLW+V+R Y V NLQSHIRSD+++AKMFEGFVKSDPRFE++VP
Sbjct: 361 VDYKDWQIGTGKRFRALRLWLVMRCYRVANLQSHIRSDVQMAKMFEGFVKSDPRFEMIVP 420

Query: 415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLT 474
           R F+LVCFRLNP   S  AD E+LN+KLLD VNSTGR Y+THT  G +Y+LRFAVGA+LT
Sbjct: 421 RAFSLVCFRLNPSGGSNEADLELLNKKLLDRVNSTGRTYMTHTKAGEVYLLRFAVGATLT 480

Query: 475 DERHVVAAWELIMEGADRLFK 495
           ++RHV AAWELI + AD + K
Sbjct: 481 EDRHVYAAWELIKQCADAVLK 501

Source: Mitragyna speciosa

Species: Mitragyna speciosa

Genus: Mitragyna

Family: Rubiaceae

Order: Gentianales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|291059159|gb|ADD71923.1| L-tryptophan decarboxylase [Actaea racemosa]

 Score =  744 bits (1921), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/495 (70%), Positives = 409/495 (82%), Gaps = 2/495 (0%)

Query: 1   MGSLDSNMAES--VQFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSAL 58
           MGSL +N+ E     F PLD +E RKQA+Q VDFI DYY+NIESYPVL+QV PG+LR+ L
Sbjct: 1   MGSLPANIPEPELKDFNPLDLEELRKQAYQTVDFIVDYYKNIESYPVLSQVNPGYLRTQL 60

Query: 59  PDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVG 118
           P+SAP++PE FETILKDVQ  IIPG+THWLSPNFFA+FPATVS+A FLGEMLC  FNSVG
Sbjct: 61  PESAPNKPEPFETILKDVQNVIIPGMTHWLSPNFFAYFPATVSSAAFLGEMLCTGFNSVG 120

Query: 119 FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRAL 178
           FNWLASPASTELE VVMDWLA +LKLP +FMFS TGGGVI  TTS++IL TL+A+RDRAL
Sbjct: 121 FNWLASPASTELESVVMDWLARLLKLPTSFMFSDTGGGVIHGTTSEAILCTLVASRDRAL 180

Query: 179 DAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVE 238
           + +  EN+ KLVVY SDQTHST AK CK+AG+ P N+R +PTS + NF+LSP  LR  +E
Sbjct: 181 ETICDENIAKLVVYSSDQTHSTLAKACKIAGILPRNVRVIPTSKEDNFALSPTNLRTTIE 240

Query: 239 ADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY 298
           ADVEAGL P++LCATVGTTS+ AVD V  LA+VAN +G+WVHVDAAYAGSACICPEFRH+
Sbjct: 241 ADVEAGLTPIYLCATVGTTSSNAVDPVGQLADVANGFGVWVHVDAAYAGSACICPEFRHF 300

Query: 299 LNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK 358
           ++GIERVDS S SPHKWLL+YLDCCCLWVKQP L+ K L  +PE+LKNKP+E NSVVD+K
Sbjct: 301 IDGIERVDSLSLSPHKWLLTYLDCCCLWVKQPILITKVLGCNPEFLKNKPTELNSVVDYK 360

Query: 359 DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA 418
           DWQVG GRRF++LRLW V RSYGV NLQSHIRSDIR+A+MFEGFVKSDPRFEIV+PR FA
Sbjct: 361 DWQVGYGRRFRALRLWFVFRSYGVANLQSHIRSDIRMAEMFEGFVKSDPRFEIVIPRQFA 420

Query: 419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERH 478
           LVCFRL           E+ N+ LLD VNS G++Y+THT++GG Y+LRFAVG++ T E H
Sbjct: 421 LVCFRLTLSDEYEPELVELFNQDLLDRVNSGGKMYMTHTVIGGTYVLRFAVGSTATKEHH 480

Query: 479 VVAAWELIMEGADRL 493
           V AAW LI E AD L
Sbjct: 481 VSAAWNLIKETADML 495

Source: Actaea racemosa

Species: Actaea racemosa

Genus: Actaea

Family: Ranunculaceae

Order: Ranunculales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|374085876|gb|AEY82396.1| tryptophan decarboxylase [Tabernaemontana elegans]

 Score =  743 bits (1917), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/500 (69%), Positives = 429/500 (85%), Gaps = 8/500 (1%)

Query: 1   MGSLDS-NMAESV----QFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLR 55
           MGS+DS N+A S     +FKPLDA+EFRK+AH+MVDFIADYY+N+E+YPVL+QVEPG+LR
Sbjct: 1   MGSIDSTNVAPSTPSIAEFKPLDAEEFRKEAHRMVDFIADYYKNVENYPVLSQVEPGYLR 60

Query: 56  SALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFN 115
             LP++AP+ PES + I+ D+Q+ I+PG+T+W+SPNF+AFFPATVS+A FLGEML    N
Sbjct: 61  ERLPENAPYLPESLDMIINDIQKDIMPGMTNWMSPNFYAFFPATVSSAAFLGEMLSTALN 120

Query: 116 SVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARD 175
           SVGF W++SPA+TELE++VMDW A MLKLPK+FMFSGTGGGVIQNTTS+SIL T+IAAR+
Sbjct: 121 SVGFTWISSPAATELEMIVMDWFAQMLKLPKSFMFSGTGGGVIQNTTSESILCTIIAARE 180

Query: 176 RALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRR 235
           RALD +G +N+ KLV YGSDQTH+ F K C+LAG+ P+NIR +PT+ + +FS++P++LR+
Sbjct: 181 RALDKLGQDNIGKLVCYGSDQTHTMFPKTCRLAGIFPSNIRLVPTTAETDFSIAPEVLRK 240

Query: 236 AVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEF 295
            VEADV AGL PLFLCAT+GTTSTTA D V  LAE+ANE+ IW+HVDAAYAGSACICPEF
Sbjct: 241 MVEADVAAGLTPLFLCATLGTTSTTATDPVNALAEIANEFDIWIHVDAAYAGSACICPEF 300

Query: 296 RHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355
           RHYL+GIERVDS S SPHKW L+YLDC CLWVK+P LL++AL+T+PEYLKNK SE + VV
Sbjct: 301 RHYLDGIERVDSLSISPHKWFLAYLDCTCLWVKKPQLLLRALTTNPEYLKNKQSELDKVV 360

Query: 356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415
           DFK+WQ+ TGR+F++L+LW +LRSYGV NLQSHIRSD+ +AKMFEGFV+SDPRFE+VVPR
Sbjct: 361 DFKNWQIATGRKFRALKLWFILRSYGVANLQSHIRSDVAMAKMFEGFVRSDPRFEVVVPR 420

Query: 416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTD 475
            F+LVCFRL P+P S   D E LN+KLLD +NSTGRVY+THTIVGG+YMLR AVG+SLT+
Sbjct: 421 AFSLVCFRLKPFPGS---DVEALNKKLLDKLNSTGRVYMTHTIVGGIYMLRLAVGSSLTE 477

Query: 476 ERHVVAAWELIMEGADRLFK 495
           ERHV A WELI E A+   K
Sbjct: 478 ERHVRAVWELIKELANDSLK 497

Source: Tabernaemontana elegans

Species: Tabernaemontana elegans

Genus: Tabernaemontana

Family: Apocynaceae

Order: Gentianales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|291059161|gb|ADD71924.1| L-tryptophan decarboxylase [Actaea racemosa]

 Score =  742 bits (1916), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/493 (70%), Positives = 407/493 (82%)

Query: 1   MGSLDSNMAESVQFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPD 60
           MGS  +N+ E   F PLD +EFRKQA+Q VDFI DYY+NIESYPVL+QV+PG++R+ LP+
Sbjct: 1   MGSFPANIPELKDFNPLDLEEFRKQAYQTVDFIVDYYKNIESYPVLSQVKPGYIRTQLPE 60

Query: 61  SAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFN 120
           SAP++PE FETILKDVQ  IIPG+THWLSPNFFA+FPATVS+A FLGEMLC  FNSVGFN
Sbjct: 61  SAPNKPEPFETILKDVQNVIIPGMTHWLSPNFFAYFPATVSSAAFLGEMLCTGFNSVGFN 120

Query: 121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA 180
           WLASPASTELE VVMDWLA +LKLP +FMFS TGGGVI  TTS++IL TL+A+RDRAL+ 
Sbjct: 121 WLASPASTELESVVMDWLARLLKLPTSFMFSDTGGGVIHGTTSEAILCTLVASRDRALET 180

Query: 181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEAD 240
           +  EN+ KLVVYGSDQTHST  K CK+AG+ P N+R +PTS + NF+LS   LR  +EAD
Sbjct: 181 ICDENIAKLVVYGSDQTHSTLVKACKIAGILPRNVRVIPTSKEDNFALSSTNLRTTIEAD 240

Query: 241 VEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN 300
           VEAGL P++LCATVGTTS+ AVD V  LA+VAN +G+WVHVDAAYAGSACICPEFRH+++
Sbjct: 241 VEAGLTPIYLCATVGTTSSNAVDPVGQLADVANGFGVWVHVDAAYAGSACICPEFRHFID 300

Query: 301 GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDW 360
           GIERVDS S SPHKWLL+YLDC CLWVKQP L+ K L  +PE+LKNKP+E NSVVD+KDW
Sbjct: 301 GIERVDSLSLSPHKWLLTYLDCSCLWVKQPILITKVLGCNPEFLKNKPTELNSVVDYKDW 360

Query: 361 QVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALV 420
           QVG GRRF++LRLW V RSYGV NLQSHIRSD+R+A+MFEGFVKSDPRFEIVVPR FALV
Sbjct: 361 QVGYGRRFRALRLWFVFRSYGVANLQSHIRSDVRMAEMFEGFVKSDPRFEIVVPRQFALV 420

Query: 421 CFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVV 480
           CFRL           E+ NR LLD VNS G++Y+THT++GG Y+LRFAVG++ T E HV 
Sbjct: 421 CFRLTLSDEYEPELVELFNRDLLDRVNSGGKMYMTHTVIGGTYVLRFAVGSTATKEHHVS 480

Query: 481 AAWELIMEGADRL 493
            AW LI E AD L
Sbjct: 481 TAWNLIKETADML 493

Source: Actaea racemosa

Species: Actaea racemosa

Genus: Actaea

Family: Ranunculaceae

Order: Ranunculales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|421999454|emb|CCO62221.1| tryptophan decarboxylase, partial [Actaea racemosa]

 Score =  729 bits (1882), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/479 (70%), Positives = 399/479 (83%)

Query: 10  ESVQFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESF 69
           E   F P D +EFRKQA+Q VDFI DYY+NIES PVL+QV+PG++R+ LP+SAP++PE F
Sbjct: 2   ELKDFNPWDLEEFRKQAYQTVDFIVDYYKNIESCPVLSQVKPGYIRTQLPESAPNKPEPF 61

Query: 70  ETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTE 129
           ETILKDVQ  IIPG+THWLSPNFFA+FPATVS+A FLGEMLC  FNSVGFNWLASPASTE
Sbjct: 62  ETILKDVQNVIIPGMTHWLSPNFFAYFPATVSSAAFLGEMLCTGFNSVGFNWLASPASTE 121

Query: 130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKL 189
           LE VVMDWLA +LKLP +FMFS TGGGVI  TTS++IL TL+A+RDRAL+ +  EN+ KL
Sbjct: 122 LESVVMDWLARLLKLPTSFMFSDTGGGVIHGTTSEAILCTLVASRDRALETICDENIAKL 181

Query: 190 VVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLF 249
           VVYGSDQTHST  K CK+AG+ P N+R +PTS + NF+LSP  L+  +EADVEAGL P++
Sbjct: 182 VVYGSDQTHSTLVKACKIAGILPGNVRVIPTSKEDNFALSPTNLQTTIEADVEAGLTPIY 241

Query: 250 LCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFS 309
           LCATVGTTS+ AVD V  LA+VAN +G+WVHVDAAYAGSACICPEFRH+++GIERVDS S
Sbjct: 242 LCATVGTTSSNAVDPVGQLADVANGFGVWVHVDAAYAGSACICPEFRHFIDGIERVDSLS 301

Query: 310 FSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK 369
            SPHKWLL+YLDCCCLWVKQP L+ K L  +PE+LKNKP+E NSVVD+KDWQVG GRRF+
Sbjct: 302 LSPHKWLLTYLDCCCLWVKQPILITKVLGCNPEFLKNKPTELNSVVDYKDWQVGYGRRFR 361

Query: 370 SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPH 429
           +LRLW V RSYGV NLQSHIRSD+R+A+MFEGFVKSDPRFEI+VPR FALVCFRL     
Sbjct: 362 ALRLWFVFRSYGVANLQSHIRSDVRMAEMFEGFVKSDPRFEIIVPRQFALVCFRLTLSDE 421

Query: 430 SGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIME 488
                 E+ NR LLD VNS G++Y+THT++GG Y+LRFAVG++ T E HV AAW LI E
Sbjct: 422 YEPELVELFNRDLLDRVNSGGKMYMTHTVIGGTYVLRFAVGSTATKEHHVSAAWNLIKE 480

Source: Actaea racemosa

Species: Actaea racemosa

Genus: Actaea

Family: Ranunculaceae

Order: Ranunculales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|374085878|gb|AEY82397.1| tryptophan decarboxylase [Vinca minor]

 Score =  728 bits (1878), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/502 (68%), Positives = 422/502 (84%), Gaps = 10/502 (1%)

Query: 1   MGSLDS-------NMAESVQFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGF 53
           MGS+DS       N +   +FKPL+A+EFRKQAH MVDFIADYY+N+ESYPVL+QVEPG+
Sbjct: 1   MGSIDSTNDVALSNGSSVGEFKPLEAEEFRKQAHCMVDFIADYYKNVESYPVLSQVEPGY 60

Query: 54  LRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCAC 113
           LR  LP++AP+ PES + I+ D+Q+ IIPG+THW+SPNF+AFFPATVS+A FLGEML   
Sbjct: 61  LRERLPETAPYLPESLDKIMSDIQKDIIPGMTHWMSPNFYAFFPATVSSAAFLGEMLSTA 120

Query: 114 FNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAA 173
            NSVGF W++SPA+TELE++VMDWLA MLKLP+ FMFSGTGGGVIQNTTS+SIL T+IAA
Sbjct: 121 LNSVGFTWVSSPAATELEMIVMDWLAKMLKLPECFMFSGTGGGVIQNTTSESILCTIIAA 180

Query: 174 RDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLL 233
           R+R L+ +G  ++ KLV YGSDQTH+ F K CKLAG+ P NIR +PT+++ +FS+ P +L
Sbjct: 181 RERVLENLGPNSIGKLVCYGSDQTHTMFPKTCKLAGIFPDNIRLIPTTLETDFSIDPHVL 240

Query: 234 RRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICP 293
           R  V+ADV+AGL+PLFLCAT+GTTSTTA D V  L+E+ NE+ IW+HVDAAYAGSACICP
Sbjct: 241 REMVKADVDAGLIPLFLCATLGTTSTTATDPVSSLSEITNEFNIWMHVDAAYAGSACICP 300

Query: 294 EFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS 353
           EFRHYL+GIERVDS S SPHKWLL+YLD  CLWVK P LL++AL+T+PEYLKNK S+ + 
Sbjct: 301 EFRHYLDGIERVDSLSLSPHKWLLAYLDSTCLWVKNPNLLLRALTTNPEYLKNKQSDLDK 360

Query: 354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV 413
           VVDFK+WQ+ TGR+F+SL+LW++LRSYGV NLQ+HIRSD+ +AKMFEGFV+SDPRFE+VV
Sbjct: 361 VVDFKNWQIATGRKFRSLKLWLILRSYGVANLQTHIRSDVAMAKMFEGFVRSDPRFEVVV 420

Query: 414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASL 473
           PR+F+LVCFRL P P S   D E+LN+KL D +NSTGRVY+THTIVGG+YMLR AVG+SL
Sbjct: 421 PRNFSLVCFRLKPLPGS---DVEILNKKLNDMLNSTGRVYMTHTIVGGIYMLRLAVGSSL 477

Query: 474 TDERHVVAAWELIMEGADRLFK 495
           T+E HV A WELI + AD L K
Sbjct: 478 TEEHHVRAVWELIKKLADDLLK 499

Source: Vinca minor

Species: Vinca minor

Genus: Vinca

Family: Apocynaceae

Order: Gentianales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145839453|gb|ABP96805.1| tryptophan decarboxylase [Rauvolfia verticillata] gi|302371969|gb|ADL28270.1| tryptophan decarboxylase [Rauvolfia verticillata]

 Score =  727 bits (1876), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 338/500 (67%), Positives = 424/500 (84%), Gaps = 8/500 (1%)

Query: 1   MGSLDS-----NMAESVQFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLR 55
           MGS+DS     + +   +FKPL+A+EFRKQAH+MVDFIADYY+N+ESYPVL+QVEPG+LR
Sbjct: 1   MGSIDSTDVAISASPVAEFKPLEAEEFRKQAHRMVDFIADYYKNVESYPVLSQVEPGYLR 60

Query: 56  SALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFN 115
             LP++ P+ P+S + I+ D+Q+ IIPG+T+W+SPNF+AFFPATVS+A FLGEML    N
Sbjct: 61  ERLPETPPYLPDSLDKIIDDIQKDIIPGMTNWMSPNFYAFFPATVSSAAFLGEMLSTALN 120

Query: 116 SVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARD 175
           SVGF W++SPA+TELE++VMDWLA MLKLPK+FMFSGTGGGVIQNTTS+SIL T+IAAR+
Sbjct: 121 SVGFTWVSSPAATELEMIVMDWLAQMLKLPKSFMFSGTGGGVIQNTTSESILCTIIAARE 180

Query: 176 RALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRR 235
           RAL+ +G +++ KLV YGSDQTH+ F K CKLAG+SP NIR +PT+ + +F ++P++LR 
Sbjct: 181 RALEELGVDSIGKLVCYGSDQTHTMFPKTCKLAGISPKNIRLIPTTAETDFGIAPEVLRG 240

Query: 236 AVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEF 295
            VEAD+ AGLVPLFLCAT+GTTS+TA D V+ L+E+ANE+ IW+HVDAAYAGSACICPEF
Sbjct: 241 MVEADIAAGLVPLFLCATLGTTSSTATDPVDSLSEIANEFNIWMHVDAAYAGSACICPEF 300

Query: 296 RHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355
            HYL+GIERVDS S SPHKWLL+YLDC CLWVK+P  +++AL+T+PEYLKNK SE + VV
Sbjct: 301 MHYLDGIERVDSLSISPHKWLLAYLDCTCLWVKKPHFILRALTTNPEYLKNKQSELDKVV 360

Query: 356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415
           DFK+WQ+ TGR+F++L+LW++LRSYGV NLQSHIRSD+ +AKMFE F +SDPRFE+VVPR
Sbjct: 361 DFKNWQIATGRKFRALKLWLILRSYGVSNLQSHIRSDVAMAKMFEDFARSDPRFEVVVPR 420

Query: 416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTD 475
           +F+LVCFRL   P S   D E LN+KLLD +NSTGRVY+THTIVGG+YMLR AVG+SLT+
Sbjct: 421 NFSLVCFRLKALPGS---DVEALNKKLLDMLNSTGRVYMTHTIVGGIYMLRLAVGSSLTE 477

Query: 476 ERHVVAAWELIMEGADRLFK 495
           E HV A WELI E A+ L K
Sbjct: 478 EHHVRAVWELIKELANDLLK 497

Source: Rauvolfia verticillata

Species: Rauvolfia verticillata

Genus: Rauvolfia

Family: Apocynaceae

Order: Gentianales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	499
TAIR|locus:2038937	490	AAS "AT2G20340" [Arabidopsis t	0.957	0.975	0.563	7.6e-151
TAIR|locus:2139855	547	TYRDC "L-tyrosine decarboxylas	0.995	0.908	0.521	1.4e-144
MGI|MGI:94876	480	Ddc "dopa decarboxylase" [Mus	0.933	0.970	0.458	4.5e-114
ZFIN|ZDB-GENE-040426-2656	480	ddc "dopa decarboxylase" [Dani	0.933	0.970	0.453	9.4e-114
RGD|2494	480	Ddc "dopa decarboxylase (aroma	0.933	0.970	0.451	1.5e-113
UNIPROTKB|P27718	487	DDC "Aromatic-L-amino-acid dec	0.923	0.946	0.454	2e-111
UNIPROTKB|P20711	480	DDC "Aromatic-L-amino-acid dec	0.929	0.966	0.450	2e-111
UNIPROTKB|E1BV90	485	DDC "Uncharacterized protein"	0.933	0.960	0.439	2.9e-110
UNIPROTKB|F1PFV0	480	DDC "Uncharacterized protein"	0.929	0.966	0.449	2.9e-110
UNIPROTKB|P80041	486	DDC "Aromatic-L-amino-acid dec	0.915	0.940	0.447	1e-109

TAIR|locus:2038937 AAS "AT2G20340" [Arabidopsis thaliana (taxid:3702)]

 Score = 1472 (523.2 bits), Expect = 7.6e-151, P = 7.6e-151
 Identities = 270/479 (56%), Positives = 352/479 (73%)

Query:    15 KPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILK 74
             KP+D+++ R+  H MVDFIADYY+ IE +PVL+QV+PG+L   LPDSAP  PE+ + +L 
Sbjct:    10 KPMDSEQLREYGHLMVDFIADYYKTIEDFPVLSQVQPGYLHKLLPDSAPDHPETLDQVLD 69

Query:    75 DVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVV 134
             DV+ KI+PG+THW SP+FFA++P+  S AGFLGEML A    VGF+W+ SPA+TELE++V
Sbjct:    70 DVRAKILPGVTHWQSPSFFAYYPSNSSVAGFLGEMLSAGLGIVGFSWVTSPAATELEMIV 129

Query:   135 MDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGS 194
             +DW+A +L LP+ FM  G GGGVIQ + S+++LV LIAARD+ L +VG   + KLVVY S
Sbjct:   130 LDWVAKLLNLPEQFMSKGNGGGVIQGSASEAVLVVLIAARDKVLRSVGKNALEKLVVYSS 189

Query:   195 DQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATV 254
             DQTHS   K C++AG+ P N R L T    N++L P+ L+ AV  D+EAGL+P FLCA V
Sbjct:   190 DQTHSALQKACQIAGIHPENCRVLTTDSSTNYALRPESLQEAVSRDLEAGLIPFFLCANV 249

Query:   255 GTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHK 314
             GTTS+TAVD +  L ++AN  GIW HVDAAYAGSACICPE+R Y++G+E  DSF+ + HK
Sbjct:   250 GTTSSTAVDPLAALGKIANSNGIWFHVDAAYAGSACICPEYRQYIDGVETADSFNMNAHK 309

Query:   315 WLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLW 374
             W L+  DC  LWVK    L  ALST+PE+LKNK S++N VVD+KDWQ+  GRRF+SL+LW
Sbjct:   310 WFLTNFDCSLLWVKDQDSLTLALSTNPEFLKNKASQANLVVDYKDWQIPLGRRFRSLKLW 369

Query:   375 MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSAD 434
             MVLR YG   L+S+IR+ I+LAK FE  V  DP FEIV PR FALVCFRL P        
Sbjct:   370 MVLRLYGSETLKSYIRNHIKLAKEFEQLVSQDPNFEIVTPRIFALVCFRLVPVKDEEKKC 429

Query:   435 TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493
                 NR+LLD VNS+G+++++HT + G  +LR A+GA LT+E+HV  AW++I E A  L
Sbjct:   430 NNR-NRELLDAVNSSGKLFMSHTALSGKIVLRCAIGAPLTEEKHVKEAWKIIQEEASYL 487

GO:0004837 "tyrosine decarboxylase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISM

GO:0006520 "cellular amino acid metabolic process" evidence=ISS

GO:0009611 "response to wounding" evidence=IEP

GO:1990055 "phenylacetaldehyde synthase activity" evidence=IDA

GO:0006559 "L-phenylalanine catabolic process" evidence=IDA

TAIR|locus:2139855 TYRDC "L-tyrosine decarboxylase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1413 (502.5 bits), Expect = 1.4e-144, P = 1.4e-144
 Identities = 263/504 (52%), Positives = 360/504 (71%)

Query:     2 GSLDSNMAESVQFKPLDAQEFRKQAHQMVDFIADYYQNIES----YPVLTQVEPGFLRSA 57
             G+  +N A+ V+ KP+D++  R+Q H MVDFIADYY+N++     +PVL+QV+PG+LR  
Sbjct:    45 GNGKANGAKVVKMKPMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDM 104

Query:    58 LPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSV 117
             LPDSAP RPES + +L DV +KI+PGITHW SP++FA++ ++ S AGFLGEML A  + V
Sbjct:   105 LPDSAPERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVV 164

Query:   118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRA 177
             GF WL SPA+TELEI+V+DWLA +L+LP  F+ +G GGGVIQ T  +++LV ++AARDR 
Sbjct:   165 GFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRI 224

Query:   178 LDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAV 237
             L  VG   + +LVVYGSDQTHS+F K C + G+   NIR L T    N+ + P+ L  A+
Sbjct:   225 LKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAI 284

Query:   238 EADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH 297
               D+  G +P F+CATVGTTS+ AVD + PL  +A +YGIW+HVDAAYAG+ACICPE+R 
Sbjct:   285 SHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRK 344

Query:   298 YLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYL--KNKPSESNSVV 355
             +++GIE  DSF+ + HKWL +   C  LWVK    L+ AL T+PEYL  K K S+ ++VV
Sbjct:   345 FIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVKVSKKDTVV 404

Query:   356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR 415
             ++KDWQ+   RRF+SL+LWMVLR YG  NL++ IR  + LAK FE +V  DP FE+V  R
Sbjct:   405 NYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTR 464

Query:   416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTD 475
             +F+LVCFRL P         E  NR+LL  VNSTG+++++HT + G ++LRFAVGA LT+
Sbjct:   465 YFSLVCFRLAPVDGDEDQCNER-NRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTE 523

Query:   476 ERHVVAAWELIMEGADRLFKGSAF 499
             E+HV  AW++I + A +  +   +
Sbjct:   524 EKHVTEAWQIIQKHASKFTRNDHY 547

GO:0003824 "catalytic activity" evidence=IEA

GO:0004837 "tyrosine decarboxylase activity" evidence=ISS;IDA

GO:0005737 "cytoplasm" evidence=ISM;IDA

GO:0006520 "cellular amino acid metabolic process" evidence=ISS

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0004058 "aromatic-L-amino-acid decarboxylase activity" evidence=IDA

GO:0009414 "response to water deprivation" evidence=IEP

GO:0009611 "response to wounding" evidence=IEP

GO:1901695 "tyramine biosynthetic process" evidence=IMP

MGI|MGI:94876 Ddc "dopa decarboxylase" [Mus musculus (taxid:10090)]

 Score = 1125 (401.1 bits), Expect = 4.5e-114, P = 4.5e-114
 Identities = 224/489 (45%), Positives = 309/489 (63%)

Query:    17 LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDV 76
             +D++EFR++  +MVD+IADY   IE  PV   VEPG+LR  +P +AP  PE++E I+KD+
Sbjct:     1 MDSREFRRRGKEMVDYIADYLDGIEGRPVYPDVEPGYLRPLIPATAPQEPETYEDIIKDI 60

Query:    77 QEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMD 136
             ++ I+PG+THW SP FFA+FP   S    L +MLC     +GF+W ASPA TELE V+MD
Sbjct:    61 EKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMD 120

Query:   137 WLATMLKLPKTFMF--SGTGGGVIQNTTSDSILVTLIAARD---RALDAVGAEN-----M 186
             WL  ML+LP+ F+   +G GGGVIQ + S++ LV L+AAR    R L A   E      M
Sbjct:   121 WLGKMLELPEAFLAGRAGEGGGVIQGSASEATLVALLAARTKVIRQLQAASPEFTQAAIM 180

Query:   187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV 246
              KLV Y SDQ HS+  +   + G+    ++A+P+  D NFS+    LR A+E D  AGL+
Sbjct:   181 EKLVAYTSDQAHSSVERAGLIGGIK---LKAVPS--DGNFSMRASALREALERDKAAGLI 235

Query:   247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD 306
             P F+ AT+GTTS  + DN+  +  + N+ G+W+H+DAAYAGSA ICPEFR+ LNG+E  D
Sbjct:   236 PFFVVATLGTTSCCSFDNLLEVGPICNQEGVWLHIDAAYAGSAFICPEFRYLLNGVEFAD 295

Query:   307 SFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR 366
             SF+F+PHKWLL   DC  +WVK+   L  A + DP YLK+   +S  + D++ WQ+  GR
Sbjct:   296 SFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFNMDPVYLKHSHQDSGFITDYRHWQIPLGR 355

Query:   367 RFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP 426
             RF+SL++W V R YGV  LQ++IR  + L+  FE  V+ DPRFEI       LVCFRL  
Sbjct:   356 RFRSLKMWFVFRMYGVKGLQAYIRKHVELSHEFESLVRQDPRFEICTEVILGLVCFRLK- 414

Query:   427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486
                 GS +   LN  LL  +NS  +++L    +   ++LRFAV A   +  HV  AWE I
Sbjct:   415 ----GSNE---LNETLLQRINSAKKIHLVPCRLRDKFVLRFAVCARTVESAHVQLAWEHI 467

Query:   487 MEGADRLFK 495
              + A  + +
Sbjct:   468 SDLASSVLR 476

GO:0003824 "catalytic activity" evidence=IEA

GO:0004058 "aromatic-L-amino-acid decarboxylase activity" evidence=ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0008021 "synaptic vesicle" evidence=ISO

GO:0009636 "response to toxic substance" evidence=IDA

GO:0015842 "synaptic vesicle amine transport" evidence=ISO

GO:0016597 "amino acid binding" evidence=ISO

GO:0016829 "lyase activity" evidence=IEA

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0019752 "carboxylic acid metabolic process" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=ISO

GO:0030170 "pyridoxal phosphate binding" evidence=ISO

GO:0030424 "axon" evidence=ISO

GO:0042416 "dopamine biosynthetic process" evidence=ISO

GO:0042423 "catecholamine biosynthetic process" evidence=IEA

GO:0042427 "serotonin biosynthetic process" evidence=ISO

GO:0043025 "neuronal cell body" evidence=ISO

ZFIN|ZDB-GENE-040426-2656 ddc "dopa decarboxylase" [Danio rerio (taxid:7955)]

 Score = 1122 (400.0 bits), Expect = 9.4e-114, P = 9.4e-114
 Identities = 222/489 (45%), Positives = 311/489 (63%)

Query:    17 LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDV 76
             +DA EFR++  +MVD++ADY +NIE   V   VEPG+LRS +P+ AP  PES+E ++KD+
Sbjct:     1 MDAAEFRRRGREMVDYVADYIENIEKRQVYPDVEPGYLRSLIPEEAPEEPESYEDVVKDI 60

Query:    77 QEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMD 136
             +  I+PG+THW SP F+A+FP   S    L ++LC     +GF+W ASPA TELE V++D
Sbjct:    61 ERVIMPGVTHWHSPYFYAYFPTAHSYPAMLADILCGAIGCIGFSWAASPACTELETVMLD 120

Query:   137 WLATMLKLPKTFMFS--GTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN--------M 186
             WL  MLKLP+ F+    G GGGVIQ+T S++ L+TL+AAR + +  + A++        +
Sbjct:   121 WLGKMLKLPEDFLAGTKGKGGGVIQSTASEATLITLLAARSKIVRLIQADHPDRSETDII 180

Query:   187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV 246
              KLV Y SDQ HS+  +   + GV    ++ +PT  D+ FS+    L R ++ D  AGL+
Sbjct:   181 SKLVAYSSDQAHSSVERAGLIGGV---RMKKIPT--DSKFSVRGDALERILKEDKAAGLI 235

Query:   247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD 306
             P F CAT+GTT++ A D +  L  + N   +W+H+DAAYAGSA ICPEFR  LNGIE  D
Sbjct:   236 PFFFCATLGTTASCAFDCITELGPICNAEKMWMHIDAAYAGSAFICPEFRPLLNGIEFAD 295

Query:   307 SFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR 366
             SF+F+PHKWLL   DC  +WVK+   ++ A   +P YLK+   ES  V D++ WQ+  GR
Sbjct:   296 SFNFNPHKWLLINFDCSAMWVKKRADIIGAFKMEPLYLKHDHQESGLVTDYRHWQIPLGR 355

Query:   367 RFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP 426
             RF+SL++W V R YG+  LQ++IR  + LAK FE FV++D RFEI       LVCFRL  
Sbjct:   356 RFRSLKMWFVFRMYGLKALQAYIRKHVGLAKEFEAFVRADQRFEISADVVMGLVCFRLKG 415

Query:   427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486
              P+        L+  LL  +NS  +++L    + GL++LRFAV A  T+ RHV  AW  I
Sbjct:   416 -PNE-------LSENLLKRINSARKIHLVPCHLAGLFVLRFAVCARATESRHVQEAWCHI 467

Query:   487 MEGADRLFK 495
              + A  L +
Sbjct:   468 RQLASELLQ 476

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0003824 "catalytic activity" evidence=IEA

GO:0019752 "carboxylic acid metabolic process" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0016829 "lyase activity" evidence=IEA

RGD|2494 Ddc "dopa decarboxylase (aromatic L-amino acid decarboxylase)" [Rattus norvegicus (taxid:10116)]

 Score = 1120 (399.3 bits), Expect = 1.5e-113, P = 1.5e-113
 Identities = 221/489 (45%), Positives = 310/489 (63%)

Query:    17 LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDV 76
             +D++EFR++  +MVD+IADY   IE  PV   VEPG+LR+ +P +AP  PE++E I++D+
Sbjct:     1 MDSREFRRRGKEMVDYIADYLDGIEGRPVYPDVEPGYLRALIPTTAPQEPETYEDIIRDI 60

Query:    77 QEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMD 136
             ++ I+PG+THW SP FFA+FP   S    L +MLC     +GF+W ASPA TELE V+MD
Sbjct:    61 EKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMD 120

Query:   137 WLATMLKLPKTFMF--SGTGGGVIQNTTSDSILVTLIAARD---RALDAVGAEN-----M 186
             WL  ML+LP+ F+   +G GGGVIQ + S++ LV L+AAR    R L A   E      M
Sbjct:   121 WLGKMLELPEAFLAGRAGEGGGVIQGSASEATLVALLAARTKMIRQLQAASPELTQAALM 180

Query:   187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV 246
              KLV Y SDQ HS+  +   + GV    I+A+P+  D N+S+    LR A+E D  AGL+
Sbjct:   181 EKLVAYTSDQAHSSVERAGLIGGVK---IKAIPS--DGNYSMRAAALREALERDKAAGLI 235

Query:   247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD 306
             P F+  T+GTTS  + DN+  +  + N+ G+W+H+DAAYAGSA ICPEFR+ LNG+E  D
Sbjct:   236 PFFVVVTLGTTSCCSFDNLLEVGPICNQEGVWLHIDAAYAGSAFICPEFRYLLNGVEFAD 295

Query:   307 SFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR 366
             SF+F+PHKWLL   DC  +WVK+   L +A + DP YL++   +S  + D++ WQ+  GR
Sbjct:   296 SFNFNPHKWLLVNFDCSAMWVKKRTDLTEAFNMDPVYLRHSHQDSGLITDYRHWQIPLGR 355

Query:   367 RFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP 426
             RF+SL++W V R YGV  LQ++IR  ++L+  FE  V+ DPRFEI       LVCFRL  
Sbjct:   356 RFRSLKMWFVFRMYGVKGLQAYIRKHVKLSHEFESLVRQDPRFEICTEVILGLVCFRLK- 414

Query:   427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486
                 GS     LN  LL  +NS  +++L    +   ++LRFAV +   +  HV  AWE I
Sbjct:   415 ----GS---NQLNETLLQRINSAKKIHLVPCRLRDKFVLRFAVCSRTVESAHVQLAWEHI 467

Query:   487 MEGADRLFK 495
              + A  + +
Sbjct:   468 RDLASSVLR 476

GO:0004058 "aromatic-L-amino-acid decarboxylase activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0007623 "circadian rhythm" evidence=IEP

GO:0008021 "synaptic vesicle" evidence=IDA

GO:0009636 "response to toxic substance" evidence=ISO

GO:0010259 "multicellular organismal aging" evidence=IEP

GO:0015842 "synaptic vesicle amine transport" evidence=IDA

GO:0016597 "amino acid binding" evidence=IDA

GO:0019904 "protein domain specific binding" evidence=IPI

GO:0030170 "pyridoxal phosphate binding" evidence=IDA;TAS

GO:0030424 "axon" evidence=IDA

GO:0033076 "isoquinoline alkaloid metabolic process" evidence=IEP

GO:0035690 "cellular response to drug" evidence=IEP

GO:0042416 "dopamine biosynthetic process" evidence=IEA;IDA

GO:0042417 "dopamine metabolic process" evidence=TAS

GO:0042423 "catecholamine biosynthetic process" evidence=TAS

GO:0042427 "serotonin biosynthetic process" evidence=IDA

GO:0043025 "neuronal cell body" evidence=IDA

GO:0046684 "response to pyrethroid" evidence=IEP

GO:0052314 "phytoalexin metabolic process" evidence=IEP

GO:0071312 "cellular response to alkaloid" evidence=IEP

GO:0071363 "cellular response to growth factor stimulus" evidence=IEP

UNIPROTKB|P27718 DDC "Aromatic-L-amino-acid decarboxylase" [Bos taurus (taxid:9913)]

 Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
 Identities = 220/484 (45%), Positives = 304/484 (62%)

Query:    17 LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDV 76
             ++A EFR++  +MVD++ADY + IE   V   V+PG+LR  +P +AP  PE+FE I++D+
Sbjct:     1 MNASEFRRRGKEMVDYVADYLEGIEGRQVFPDVDPGYLRPLIPTTAPQEPETFEAIIEDI 60

Query:    77 QEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMD 136
             ++ I+PG+THW SP FFA+FP   S    L +MLC     +GF+W ASPA TELE V+MD
Sbjct:    61 EKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMD 120

Query:   137 WLATMLKLPKTFMF--SGTGGGVIQNTTSDSILVTLIAARD---RALDAVGAENMH---- 187
             WL  ML+LP+ F+   +G GGGVIQ T S++ LV L+AAR    R L A   E M     
Sbjct:   121 WLGKMLQLPEAFLAGEAGEGGGVIQGTASEATLVALLAARTKVTRHLQAASPELMQAAIM 180

Query:   188 -KLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV 246
              KLV Y SDQ HS+  K   + GV    ++A+P+  D  F++    L+ A+E D  AGL+
Sbjct:   181 EKLVAYASDQAHSSVEKAGLIGGV---RLKAIPS--DGKFAMRASALQEALERDKAAGLI 235

Query:   247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD 306
             P F+ AT+GTTS  + DN+  +  + +E G+W+HVDAAYAGSA ICPEFRH LNG+E  D
Sbjct:   236 PFFVVATLGTTSCCSFDNLLEVGPICHEEGLWLHVDAAYAGSAFICPEFRHLLNGVEFAD 295

Query:   307 SFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR 366
             SF+F+PHKWLL   DC  +WVK+   L  A   DP YL++   +S  + D++ WQ+  GR
Sbjct:   296 SFNFNPHKWLLVNFDCSAMWVKKRTDLTGAFRLDPVYLRHSHQDSGLITDYRHWQLPLGR 355

Query:   367 RFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP 426
             RF+SL++W V R YGV  LQ++IR  ++L+  FE  V+ D RFEI       LVCFRL  
Sbjct:   356 RFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHAFEALVRQDTRFEICAEVILGLVCFRLK- 414

Query:   427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486
                 GS     LN  LL+ +NS  +++L    +   ++LRFA+ +   +  HV  AWE I
Sbjct:   415 ----GS---NKLNEALLESINSAKKIHLVPCSLRDRFVLRFAICSRTVELAHVQLAWEHI 467

Query:   487 MEGA 490
              E A
Sbjct:   468 QEMA 471

GO:0042416 "dopamine biosynthetic process" evidence=IEA

GO:0004058 "aromatic-L-amino-acid decarboxylase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

UNIPROTKB|P20711 DDC "Aromatic-L-amino-acid decarboxylase" [Homo sapiens (taxid:9606)]

 Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
 Identities = 220/488 (45%), Positives = 307/488 (62%)

Query:    17 LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDV 76
             ++A EFR++  +MVD++A+Y + IE   V   VEPG+LR  +P +AP  P++FE I+ DV
Sbjct:     1 MNASEFRRRGKEMVDYMANYMEGIEGRQVYPDVEPGYLRPLIPAAAPQEPDTFEDIINDV 60

Query:    77 QEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMD 136
             ++ I+PG+THW SP FFA+FP   S    L +MLC     +GF+W ASPA TELE V+MD
Sbjct:    61 EKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMD 120

Query:   137 WLATMLKLPKTFMF--SGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN--------M 186
             WL  ML+LPK F+   +G GGGVIQ + S++ LV L+AAR + +  + A +        M
Sbjct:   121 WLGKMLELPKAFLNEKAGEGGGVIQGSASEATLVALLAARTKVIHRLQAASPELTQAAIM 180

Query:   187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV 246
              KLV Y SDQ HS+  +   + GV    ++A+P+  D NF++    L+ A+E D  AGL+
Sbjct:   181 EKLVAYSSDQAHSSVERAGLIGGVK---LKAIPS--DGNFAMRASALQEALERDKAAGLI 235

Query:   247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD 306
             P F+ AT+GTT+  + DN+  +  + N+  IW+HVDAAYAGSA ICPEFRH LNG+E  D
Sbjct:   236 PFFMVATLGTTTCCSFDNLLEVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVEFAD 295

Query:   307 SFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR 366
             SF+F+PHKWLL   DC  +WVK+   L  A   DP YLK+   +S  + D++ WQ+  GR
Sbjct:   296 SFNFNPHKWLLVNFDCSAMWVKKRTDLTGAFRLDPTYLKHSHQDSGLITDYRHWQIPLGR 355

Query:   367 RFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP 426
             RF+SL++W V R YGV  LQ++IR  ++L+  FE  V+ DPRFEI V     LVCFRL  
Sbjct:   356 RFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFESLVRQDPRFEICVEVILGLVCFRLK- 414

Query:   427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486
                 GS     +N  LL  +NS  +++L    +   ++LRFA+ +   +  HV  AWE I
Sbjct:   415 ----GS---NKVNEALLQRINSAKKIHLVPCHLRDKFVLRFAICSRTVESAHVQRAWEHI 467

Query:   487 ME-GADRL 493
              E  AD L
Sbjct:   468 KELAADVL 475

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0007623 "circadian rhythm" evidence=IEA

GO:0008021 "synaptic vesicle" evidence=IEA

GO:0010259 "multicellular organismal aging" evidence=IEA

GO:0015842 "synaptic vesicle amine transport" evidence=IEA

GO:0016597 "amino acid binding" evidence=IEA

GO:0019904 "protein domain specific binding" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0033076 "isoquinoline alkaloid metabolic process" evidence=IEA

GO:0035690 "cellular response to drug" evidence=IEA

GO:0042427 "serotonin biosynthetic process" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0046684 "response to pyrethroid" evidence=IEA

GO:0052314 "phytoalexin metabolic process" evidence=IEA

GO:0071312 "cellular response to alkaloid" evidence=IEA

GO:0071363 "cellular response to growth factor stimulus" evidence=IEA

GO:0042416 "dopamine biosynthetic process" evidence=IEA

GO:0004058 "aromatic-L-amino-acid decarboxylase activity" evidence=IDA;TAS

GO:0005829 "cytosol" evidence=TAS

GO:0034641 "cellular nitrogen compound metabolic process" evidence=TAS

GO:0042423 "catecholamine biosynthetic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0046219 "indolalkylamine biosynthetic process" evidence=TAS

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|E1BV90 DDC "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1089 (388.4 bits), Expect = 2.9e-110, P = 2.9e-110
 Identities = 215/489 (43%), Positives = 303/489 (61%)

Query:    17 LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDV 76
             +DA  F K+  +MVD++ADY + IE   V   VEPG+LR+ +PD AP  PESFE + KD+
Sbjct:     1 MDATAFHKRGKEMVDYVADYLEKIEKRQVFPNVEPGYLRTLIPDCAPQDPESFEDVFKDI 60

Query:    77 QEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMD 136
             ++ I+PG+THW SP FFA+FP+  S    L +MLC     VGF+W ASPA TELE V++D
Sbjct:    61 EKIIMPGVTHWHSPYFFAYFPSASSFPALLADMLCGGIGCVGFSWAASPACTELETVMLD 120

Query:   137 WLATMLKLPKTFMFS--GTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN--------M 186
             WL  M+ LP+ F+    G GGGVIQ + S++ LV L+AAR + +  V +E         M
Sbjct:   121 WLGKMISLPEEFLAGRDGQGGGVIQGSASEATLVALLAARTKTIRRVRSEKPELTEADIM 180

Query:   187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV 246
              +LV Y SDQ HS+  +   ++GV    ++++P+  D  F++    L++ ++ D  +GL+
Sbjct:   181 GRLVAYASDQAHSSVERAALISGVK---MKSVPS--DDTFAVHGSALKKILDEDKASGLI 235

Query:   247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD 306
             P F CAT+GTT   + D +  L  + N+  IW+H+DAAYAGSA ICPEFRH+LNG+E  D
Sbjct:   236 PFFFCATLGTTPCCSFDKLLELGPICNKENIWMHIDAAYAGSAFICPEFRHFLNGVEFAD 295

Query:   307 SFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR 366
             SF+F+PHKWLL   DC  +WVK+   L+ A   +P YL++   ES  + D++ WQ+  GR
Sbjct:   296 SFNFNPHKWLLVNFDCSAMWVKKRSDLIGAFKLEPLYLQHHHQESGLITDYRHWQIPLGR 355

Query:   367 RFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP 426
             RF+SL+LW VLR YGV  LQ HIR  +RL+  FE  V  D RFEI       LVCFRL  
Sbjct:   356 RFRSLKLWFVLRMYGVTGLQEHIRKHVRLSHQFEHLVLQDERFEICAEVVLGLVCFRLK- 414

Query:   427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486
                 GS +   LN+ LL  +N   +++L    +   ++LRFA+ +   +  HV  AW+ I
Sbjct:   415 ----GSNE---LNKALLKSINEAKKIHLVPCHLREKFVLRFAICSRTVESTHVKFAWQHI 467

Query:   487 MEGADRLFK 495
              + A  L K
Sbjct:   468 SQLATELLK 476

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0009636 "response to toxic substance" evidence=IEA

UNIPROTKB|F1PFV0 DDC "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1089 (388.4 bits), Expect = 2.9e-110, P = 2.9e-110
 Identities = 219/487 (44%), Positives = 304/487 (62%)

Query:    17 LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDV 76
             +D+ EFR++  +MVDF+ADY + IE   V   VEPG+LR  +P +AP  P+ FE I+ DV
Sbjct:     1 MDSAEFRRRGKEMVDFVADYLEGIEGRQVYPDVEPGYLRPLIPTTAPEEPDMFEDIISDV 60

Query:    77 QEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMD 136
             ++ I+PG+THW SP FFA+FP+  S    L ++LC     +GF+W ASPA TELE V+MD
Sbjct:    61 EKIIMPGVTHWHSPFFFAYFPSANSYPALLADILCGAIGCIGFSWAASPACTELETVMMD 120

Query:   137 WLATMLKLPKTFMFS--GTGGGVIQNTTSDSILVTLIAARD---RALDAV--GAEN---M 186
             WL  MLKLP+ F+    G GGGVIQ + S++ LV L+AAR    R L A   G      M
Sbjct:   121 WLGKMLKLPEAFLAGQVGEGGGVIQGSASEATLVALLAARTKVTRRLQAASPGLTQGAIM 180

Query:   187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV 246
              KLV Y SDQ HS+  +   + GV    ++A+P+  D  F++    L+ A+E D   GL+
Sbjct:   181 EKLVAYSSDQAHSSVERAGLIGGVK---LKAIPS--DGKFAMRASALQEALERDKAEGLI 235

Query:   247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD 306
             P F+ AT+GTTS  + DN+  +  + N+  +W+H+DAAYAGS+ ICPEFRH LNG+E  D
Sbjct:   236 PFFVVATLGTTSCCSFDNLLEVGPICNKEDMWLHIDAAYAGSSFICPEFRHLLNGVEFAD 295

Query:   307 SFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR 366
             SF+F+PHKWLL   DC  +WVK+   L+ A   DP YLK+   +S  + D++ WQ+  GR
Sbjct:   296 SFNFNPHKWLLVNFDCSAMWVKKRTDLIGAFKLDPLYLKHNHQDSGLITDYRHWQLPLGR 355

Query:   367 RFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP 426
             RF+SL++W V R YGV  LQ++IR  +RLA  FE  V+ DPRFEI       LVCFRL  
Sbjct:   356 RFRSLKMWFVFRMYGVKGLQAYIRKHVRLAHEFERLVQQDPRFEICTEVTLGLVCFRLK- 414

Query:   427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486
                 GS     LN +LL+ +NS  +++L    +   ++LRFA+ A   +  HV  AW+ +
Sbjct:   415 ----GS---NRLNEELLERINSAKKIHLVPCHLRDKFVLRFAICARTVESAHVQLAWKHV 467

Query:   487 MEGADRL 493
              + A  L
Sbjct:   468 AQLATSL 474

GO:0009636 "response to toxic substance" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0016831 "carboxy-lyase activity" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

UNIPROTKB|P80041 DDC "Aromatic-L-amino-acid decarboxylase" [Sus scrofa (taxid:9823)]

 Score = 1084 (386.6 bits), Expect = 1.0e-109, P = 1.0e-109
 Identities = 215/480 (44%), Positives = 304/480 (63%)

Query:    17 LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDV 76
             ++A +FR++  +MVD++ADY + IE   V   V+PG+LR  +P +AP  P++FE IL+DV
Sbjct:     1 MNASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDV 60

Query:    77 QEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMD 136
             ++ I+PG+THW SP FFA+FP   S    L +MLC     +GF+W ASPA TELE V+MD
Sbjct:    61 EKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMD 120

Query:   137 WLATMLKLPKTFMF--SGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN--------M 186
             WL  ML+LP+ F+   +G GGGVIQ + S++ LV L+AAR + +  + A +        +
Sbjct:   121 WLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVL 180

Query:   187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV 246
              KLV Y SDQ HS+  +   + GV    ++A+P+  D  F++    L+ A+E D  AGL+
Sbjct:   181 EKLVAYASDQAHSSVERAGLIGGVK---LKAIPS--DGKFAMRASALQEALERDKAAGLI 235

Query:   247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD 306
             P F+ AT+GTTS  + DN+  +  + +E  IW+HVDAAYAGSA ICPEFRH LNG+E  D
Sbjct:   236 PFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFAD 295

Query:   307 SFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR 366
             SF+F+PHKWLL   DC  +WVK+   L  A   DP YLK+    S  + D++ WQ+  GR
Sbjct:   296 SFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGR 355

Query:   367 RFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP 426
             RF+SL++W V R YGV  LQ++IR  ++L+  FE FV  DPRFE+       LVCFRL  
Sbjct:   356 RFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLK- 414

Query:   427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486
                 GS   + LN  LL+ +NS  +++L    + G ++LRFA+ +   +  HV  AWE I
Sbjct:   415 ----GS---DGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHI 467

GO:0042416 "dopamine biosynthetic process" evidence=IEA

GO:0004058 "aromatic-L-amino-acid decarboxylase activity" evidence=IEA

GO:0030170 "pyridoxal phosphate binding" evidence=IEA

GO:0006520 "cellular amino acid metabolic process" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O88533	DDC_MOUSE	4, ., 1, ., 1, ., 2, 8	0.4510	0.9358	0.9729	yes	no
P54768	TYDC1_PAPSO	4, ., 1, ., 1, ., 2, 5	0.5725	0.9899	0.9536	N/A	no
P54769	TYDC2_PAPSO	4, ., 1, ., 1, ., 2, 5	0.5656	0.9839	0.9246	N/A	no
P14173	DDC_RAT	4, ., 1, ., 1, ., 2, 8	0.4408	0.9358	0.9729	yes	no
P20711	DDC_HUMAN	4, ., 1, ., 1, ., 2, 8	0.4399	0.9378	0.975	yes	no
P80041	DDC_PIG	4, ., 1, ., 1, ., 2, 8	0.4395	0.9158	0.9403	yes	no
Q7XHL3	TYDC1_ORYSJ	4, ., 1, ., 1, ., 2, 5	0.5488	0.9619	0.9657	yes	no
P17770	DDC_CATRO	4, ., 1, ., 1, ., 2, 8	0.68	0.9879	0.986	N/A	no
P54771	TYDC5_PAPSO	4, ., 1, ., 1, ., 2, 5	0.5600	0.9859	0.9407	N/A	no
P54770	TYDC3_PAPSO	4, ., 1, ., 1, ., 2, 5	0.5653	0.9839	0.9212	N/A	no
Q8RY79	TYDC1_ARATH	4, ., 1, ., 1, ., 2, 5	0.5613	0.9619	0.9795	yes	no
P22781	DDC_CAVPO	4, ., 1, ., 1, ., 2, 8	0.4294	0.9338	0.9708	yes	no
Q06088	TYDC4_PETCR	4, ., 1, ., 1, ., 2, 5	0.5848	0.9899	0.9724	N/A	no
P27718	DDC_BOVIN	4, ., 1, ., 1, ., 2, 8	0.4390	0.9398	0.9630	yes	no
Q06087	TYDC3_PETCR	4, ., 1, ., 1, ., 2, 5	0.5836	0.9899	0.9573	N/A	no
Q06086	TYDC2_PETCR	4, ., 1, ., 1, ., 2, 5	0.578	0.9899	0.9610	N/A	no
Q06085	TYDC1_PETCR	4, ., 1, ., 1, ., 2, 5	0.6064	0.8597	0.9930	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	4.1.1	0.976

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	499
PLN02880	490	PLN02880, PLN02880, tyrosine decarboxylase	0.0
PLN02590	539	PLN02590, PLN02590, probable tyrosine decarboxylas	0.0
pfam00282	373	pfam00282, Pyridoxal_deC, Pyridoxal-dependent deca	0.0
cd06450	345	cd06450, DOPA_deC_like, DOPA decarboxylase family	1e-116
COG0076	460	COG0076, GadB, Glutamate decarboxylase and related	3e-66
TIGR03799	522	TIGR03799, NOD_PanD_pyr, putative pyridoxal-depend	1e-20
TIGR03812	373	TIGR03812, tyr_de_CO2_Arch, tyrosine decarboxylase	3e-13
cd01494	170	cd01494, AAT_I, Aspartate aminotransferase (AAT) s	5e-12
PRK13520	371	PRK13520, PRK13520, L-tyrosine decarboxylase; Prov	5e-12
PRK02769	380	PRK02769, PRK02769, histidine decarboxylase; Provi	9e-11
TIGR03811	608	TIGR03811, tyr_de_CO2_Ent, tyrosine decarboxylase,	9e-06
PLN03032	374	PLN03032, PLN03032, serine decarboxylase; Provisio	1e-05
COG0520	405	COG0520, csdA, Selenocysteine lyase/Cysteine desul	4e-04
pfam00155	357	pfam00155, Aminotran_1_2, Aminotransferase class I	6e-04
TIGR01788	431	TIGR01788, Glu-decarb-GAD, glutamate decarboxylase	9e-04

>gnl|CDD|215475 PLN02880, PLN02880, tyrosine decarboxylase

 Score =  688 bits (1777), Expect = 0.0
 Identities = 277/481 (57%), Positives = 372/481 (77%), Gaps = 1/481 (0%)

Query: 14  FKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETIL 73
            +P+DA++ R+  H+MVDFIADYY++IE++PVL+QV+PG+LR  LPDSAP++PE+ + +L
Sbjct: 7   LRPMDAEQLRECGHRMVDFIADYYKSIENFPVLSQVQPGYLRELLPDSAPNQPETLDQVL 66

Query: 74  KDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIV 133
            DVQ KI+PG+THW SPN+FA++P+  S AGFLGEML A  N VGF+W+ SPA+TELE++
Sbjct: 67  DDVQAKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMI 126

Query: 134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYG 193
           V+DWLA +L LP+ F+ +G GGGVIQ T S+++LV L+AARDR L  VG   + KLVVY 
Sbjct: 127 VLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYA 186

Query: 194 SDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCAT 253
           SDQTHS   K C++AG+ P N R L T    N++L+P+LL  A+  D+ +GL+P FLCAT
Sbjct: 187 SDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCAT 246

Query: 254 VGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPH 313
           VGTTS+TAVD +  L ++A   G+W HVDAAYAGSACICPE+RHY++G+E  DSF+ + H
Sbjct: 247 VGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAH 306

Query: 314 KWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRL 373
           KW L+  DC  LWVK    L+++LST+PE+LKNK S++NSVVD+KDWQ+  GRRF+SL+L
Sbjct: 307 KWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKL 366

Query: 374 WMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSA 433
           WMVLR YGV NLQS+IR+ I+LAK FE  V  D RFE+V PR F+LVCFRL P P +   
Sbjct: 367 WMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVP-PKNNED 425

Query: 434 DTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL 493
           +   LN  LLD VNS+G+++++HT++ G Y+LRFAVGA LT+ERHV AAW+++ + A +L
Sbjct: 426 NGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKL 485

Query: 494 F 494
            
Sbjct: 486 L 486

Length = 490

>gnl|CDD|178200 PLN02590, PLN02590, probable tyrosine decarboxylase

 Score =  566 bits (1459), Expect = 0.0
 Identities = 262/496 (52%), Positives = 358/496 (72%), Gaps = 5/496 (1%)

Query: 2   GSLDSNMAESVQFKPLDAQEFRKQAHQMVDFIADYYQNIES----YPVLTQVEPGFLRSA 57
           G+  +N A+ V+ KP+D++  R+Q H MVDFIADYY+N++     +PVL+QV+PG+LR  
Sbjct: 39  GNGKANGAKVVKMKPMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDM 98

Query: 58  LPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSV 117
           LPDSAP RPES + +L DV +KI+PGITHW SP++FA++ ++ S AGFLGEML A  + V
Sbjct: 99  LPDSAPERPESLKELLDDVSKKIMPGITHWQSPSYFAYYASSTSVAGFLGEMLNAGLSVV 158

Query: 118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRA 177
           GF WL SPA+TELEI+V+DWLA +L+LP  F+ +G GGGVIQ T  +++LV ++AARDR 
Sbjct: 159 GFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRI 218

Query: 178 LDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAV 237
           L  VG   + +LVVYGSDQTHS+F K C + G+   NIR L T    N+ + P+ L  A+
Sbjct: 219 LKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAI 278

Query: 238 EADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH 297
             D+  G +P F+CATVGTTS+ AVD + PL  +A +YGIW+HVDAAYAG+ACICPE+R 
Sbjct: 279 SHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRK 338

Query: 298 YLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF 357
           +++GIE  DSF+ + HKWL +   C  LWVK    L+ AL T+PEYL+ K S+ ++VV++
Sbjct: 339 FIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNY 398

Query: 358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHF 417
           KDWQ+   RRF+SL+LWMVLR YG  NL++ IR  + LAK FE +V  DP FE+V  R+F
Sbjct: 399 KDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYF 458

Query: 418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDER 477
           +LVCFRL P         E  NR+LL  VNSTG+++++HT + G ++LRFAVGA LT+E+
Sbjct: 459 SLVCFRLAPVDGDEDQCNER-NRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEK 517

Query: 478 HVVAAWELIMEGADRL 493
           HV  AW++I + A + 
Sbjct: 518 HVTEAWQIIQKHASKF 533

Length = 539

>gnl|CDD|215836 pfam00282, Pyridoxal_deC, Pyridoxal-dependent decarboxylase conserved domain

 Score =  521 bits (1343), Expect = 0.0
 Identities = 196/377 (51%), Positives = 250/377 (66%), Gaps = 8/377 (2%)

Query: 51  PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEML 110
           PG+LR  LP++AP  PE    IL D+++ I+PG+T W SPNF A+FPA  S    LG+ML
Sbjct: 1   PGYLRPLLPEAAPIIPEPLLDILGDIRKNIMPGVTTWHSPNFHAYFPAGNSYPSLLGDML 60

Query: 111 CACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTL 170
               N  GF W +SPA TELE VVMDWLA ML LPK F+ SG GGGV+Q  +S+S L+ L
Sbjct: 61  SDAINCNGFTWESSPACTELENVVMDWLAKMLGLPKEFLGSGEGGGVLQGGSSESNLLAL 120

Query: 171 IAARDRALDAVGAENMH---KLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFS 227
           +AAR + +  + A       KLV Y SDQ HS+  K   +AGV    +R +PT  D N  
Sbjct: 121 LAARTKWIRRMKAAGKPSLGKLVAYTSDQAHSSIEKAALIAGV---ELREIPT--DENGK 175

Query: 228 LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG 287
           +    L +A+E D E GL+P F+CAT+GTT + A D ++ L ++ N+Y +W+HVDAAYAG
Sbjct: 176 MRGMDLEKAIEEDKENGLIPFFVCATLGTTGSGAFDPLQELGDICNKYDLWLHVDAAYAG 235

Query: 288 SACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNK 347
           SA ICPEFRH+L GIER DSFSF+PHKW+L  LDC  LWV+  G L +AL  +PEYL + 
Sbjct: 236 SAFICPEFRHWLFGIERADSFSFNPHKWMLVLLDCSALWVRDKGALQQALQFNPEYLGHN 295

Query: 348 PSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP 407
             +S+  VD+ DWQ+   RRF+ L+LW VLRSYGV  LQ+ IR  + LAK FE  V+ D 
Sbjct: 296 DKQSDVAVDYGDWQIPLSRRFRILKLWFVLRSYGVEGLQNQIRRHVELAKYFEALVRKDS 355

Query: 408 RFEIVVPRHFALVCFRL 424
           RFEI   R   LVCFRL
Sbjct: 356 RFEICAERGLGLVCFRL 372

Length = 373

>gnl|CDD|99743 cd06450, DOPA_deC_like, DOPA decarboxylase family

 Score =  344 bits (886), Expect = e-116
 Identities = 137/398 (34%), Positives = 191/398 (47%), Gaps = 59/398 (14%)

Query: 92  FFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFS 151
           F A F  T+     L EML +  N++ F W  SPA+TE+E  V++WLA +  LP     S
Sbjct: 1   FLAGFVTTMDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLP-----S 55

Query: 152 GTGGGVIQNTTSDSILVTLIAARDRALDAV---GAENMHKLVVYGSDQTHSTFAKVCKLA 208
               GV  +  S+S L+ L+AARDRA   +   G   + KLV+  SDQ H +  K     
Sbjct: 56  EDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYL 115

Query: 209 GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPL 268
            V    +R +P  VD +  + P+ L  A++ D   GL P+ + AT GTT T A+D +E +
Sbjct: 116 DV---KVRLVP--VDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEI 170

Query: 269 AEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVK 328
           A++A +Y +W+HVDAAY G     PE RH   GIERVDS S  PHK+ L  L C  + V 
Sbjct: 171 ADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLV- 229

Query: 329 QPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSH 388
                                                   ++L+LW  LR +G      H
Sbjct: 230 ----------------------------------------RALKLWATLRRFGRDGYGEH 249

Query: 389 IRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS 448
           I   + LAK     +++DP FE++   + +LVCFRL P     S   + LN  L D +N 
Sbjct: 250 IDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKP-----SVKLDELNYDLSDRLNE 304

Query: 449 TGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486
            G  ++  T +GG  +LRF V   LT      A  E I
Sbjct: 305 RGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDI 342

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine. Length = 345

>gnl|CDD|223154 COG0076, GadB, Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

 Score =  220 bits (562), Expect = 3e-66
 Identities = 109/454 (24%), Positives = 185/454 (40%), Gaps = 29/454 (6%)

Query: 33  IADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKII-PGITHWLSPN 91
           + D             + P F   +    AP + E  E +L ++ E +I   +     P 
Sbjct: 4   LIDKDMLNSKRYSGDSLSPLFGALSDSRMAPEKGEPLEEVLDELAELLIKDELYLDGHPR 63

Query: 92  FFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFS 151
                           E+L +  N    +   SPA+ ELE  V++ L+ +L  P+     
Sbjct: 64  ANLAGFCPTRVPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEAS-- 121

Query: 152 GTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM---HKLVVYGSDQTHSTFAKVCKLA 208
               G   +  +++ L+ L+AAR+R      AE+     K  +  S+  H +F K  +  
Sbjct: 122 ----GTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYL 177

Query: 209 GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPL 268
           G+    +R +PT V  ++ +    L  A++ +   G+V      T GTT T ++D++E L
Sbjct: 178 GLG---LRRVPT-VPTDYRIDVDALEEAIDENTIGGVV----VGTAGTTDTGSIDDIEEL 229

Query: 269 AEVANEYGIWVHVDAAYAGSACICPEFRHY-LNGIERVDSFSFSPHKWLLSYLDCCCLWV 327
           A++A EYGIW+HVDAA+ G      E       G+E VDS +   HK+ L+ + C  +  
Sbjct: 230 ADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLF 289

Query: 328 KQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQS 387
           +    L + L     YL         + +F       GR+  +L L+  LR  G    + 
Sbjct: 290 RDEEALRRILIFADYYL-----PGGGIPNFTILGSRPGRQ--ALALYANLRRLGREGYRK 342

Query: 388 HIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPY---PHSGSADTEMLNRKLLD 444
            +   + LA+     ++    FE+V      +V FRL          S   +    ++  
Sbjct: 343 LLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDEDTLADLSERLDRRGWQVPA 402

Query: 445 WVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERH 478
            +   G   +  T V G   L+F V   L  +R 
Sbjct: 403 QLLPKGLAIVFGTHVTGRQGLKFIVANLLITDRE 436

Length = 460

>gnl|CDD|163511 TIGR03799, NOD_PanD_pyr, putative pyridoxal-dependent aspartate 1-decarboxylase

 Score = 94.4 bits (235), Expect = 1e-20
 Identities = 84/293 (28%), Positives = 123/293 (41%), Gaps = 41/293 (13%)

Query: 155 GGVIQNTTSDSILVTLIAARDRALDA------VGAENMHK-LVVYG--------SDQTHS 199
           GG + N T+      L  AR+R L A      V  E +   L  YG        S++ H 
Sbjct: 167 GGTVANITA------LWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHY 220

Query: 200 TFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST 259
           +  K   + G+   N+ A+ T  DAN  +    LR       E  + PL +    GTT T
Sbjct: 221 SLGKAADVLGIGRDNLIAIKT--DANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTET 278

Query: 260 TAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY 319
             +D ++ +A++A E G   HVDAA+ G+  +   +RH L GIER DS +   HK L   
Sbjct: 279 GNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVP 338

Query: 320 LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRS 379
           +    +  K P  L+ A+    EY+  K S        KD    T    +  R  M +  
Sbjct: 339 MGAGMVLFKDPA-LMSAIEHHAEYILRKGS--------KDLGSHT---LEGSRPGMAMLV 386

Query: 380 YGVLNLQSH------IRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP 426
           Y  L++         I   I  AK F   ++  P FE+V      L+ +R  P
Sbjct: 387 YAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEPELCLLTYRYVP 439

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent) [Biosynthesis of cofactors, prosthetic groups, and carriers, Pantothenate and coenzyme A]. Length = 522

>gnl|CDD|234361 TIGR03812, tyr_de_CO2_Arch, tyrosine decarboxylase MnfA

 Score = 70.8 bits (174), Expect = 3e-13
 Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 38/229 (16%)

Query: 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE 184
           P + ++E  V+  L  +L LP  + +  +GG       +++ +  + AA++ A      E
Sbjct: 55  PGTKKIEEEVVGSLGNLLHLPDAYGYIVSGG-------TEANIQAVRAAKNLA----REE 103

Query: 185 -NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEA 243
                ++V  S   H +F K  ++ G+      A    +D ++++  + +   ++ D   
Sbjct: 104 KRTPNIIVPES--AHFSFEKAAEMLGLEL--RYA---PLDEDYTVDVKDVEDLID-DNTI 155

Query: 244 GLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG--------SACICPEF 295
           G+V        GTT    +D++E L+++A E GI++HVDAA+ G             P F
Sbjct: 156 GIV-----GIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPP-F 209

Query: 296 RHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYL 344
              L G   V S +  PHK  LS +    +  +    L K LS D  YL
Sbjct: 210 DFSLPG---VQSITIDPHKMGLSPIPAGGILFRSKSYL-KYLSVDAPYL 254

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions [Biosynthesis of cofactors, prosthetic groups, and carriers, Other]. Length = 373

>gnl|CDD|99742 cd01494, AAT_I, Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

 Score = 63.9 bits (156), Expect = 5e-12
 Identities = 42/184 (22%), Positives = 63/184 (34%), Gaps = 30/184 (16%)

Query: 135 MDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGS 194
            + LA +L+        G    V   + + +    L+A                  V   
Sbjct: 6   EEKLARLLQP-------GNDKAVFVPSGTGANEAALLALL-----------GPGDEVIVD 47

Query: 195 DQTH-STFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCAT 253
              H S +    +LAG   A    +P        L   +L        +A      +  T
Sbjct: 48  ANGHGSRYWVAAELAG---AKPVPVPVDDAGYGGLDVAILEEL-----KAKPNVALIVIT 99

Query: 254 VGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPH 313
             TTS   +  ++ + ++A EYGI + VDAA AG A   P     L      D  +FS H
Sbjct: 100 PNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPG---VLIPEGGADVVTFSLH 156

Query: 314 KWLL 317
           K L 
Sbjct: 157 KNLG 160

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), and D-amino acid superfamily (fold type IV) and Glycogen phophorylase family (fold type V). Length = 170

>gnl|CDD|237409 PRK13520, PRK13520, L-tyrosine decarboxylase; Provisional

 Score = 66.8 bits (164), Expect = 5e-12
 Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 33/224 (14%)

Query: 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE 184
           P + +LE   ++ L  +L LP  + +  +GG      T  +I   + AAR+ A     AE
Sbjct: 55  PGTAKLEEEAVEMLGELLHLPDAYGYITSGG------TEANIQA-VRAARNLA----KAE 103

Query: 185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG 244
               +VV  S   H +F K   + GV    +R  P   D ++ +  + +   ++ +   G
Sbjct: 104 KP-NIVVPES--AHFSFDKAADMLGV---ELRRAPL--DDDYRVDVKAVEDLIDDNT-IG 154

Query: 245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGS----ACICPEFRHYLN 300
           +V        GTT    VD +  L+++A E GI++HVDAA+ G         P F   L 
Sbjct: 155 IV-----GIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLP 209

Query: 301 GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYL 344
           G   VDS +  PHK  L+ +    +  +    L  AL+ D  YL
Sbjct: 210 G---VDSITIDPHKMGLAPIPAGGILFRDESYL-DALAVDTPYL 249

Length = 371

>gnl|CDD|235068 PRK02769, PRK02769, histidine decarboxylase; Provisional

 Score = 63.1 bits (154), Expect = 9e-11
 Identities = 69/304 (22%), Positives = 126/304 (41%), Gaps = 48/304 (15%)

Query: 106 LGEMLCACFNSVGFNWLASP----ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNT 161
           L        N+ G +  +       S + E  VM++ A + K+P          G I N 
Sbjct: 39  LKRFFSFSINNCG-DPYSKSNYPLNSFDFERDVMNFFAELFKIP-----FNESWGYITNG 92

Query: 162 TSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS 221
            ++  L     AR+   D           +Y S  TH + +K+ +L  +    I +LP  
Sbjct: 93  GTEGNLYGCYLARELFPDGT---------LYYSKDTHYSVSKIARLLRIKSRVITSLP-- 141

Query: 222 VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI---W 278
              N  +    L   ++ +      P  + A +GTT T A+DN++ + E+  + GI   +
Sbjct: 142 ---NGEIDYDDLISKIKENKNQ---PPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYY 195

Query: 279 VHVDAAYAGSACICP--EFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKA 336
           +H DAA +G   I P        +  + +DS + S HK++ S + C  +  K+    V+ 
Sbjct: 196 IHADAALSGM--ILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKK--KYVER 251

Query: 337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRR-FKSLRLWMVLRSYGVLNLQSHIRSDIRL 395
           +S D +Y+ +           +D  +   R    +L LW  +RS G   L+  ++  + +
Sbjct: 252 ISVDVDYIGS-----------RDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDM 300

Query: 396 AKMF 399
           A+  
Sbjct: 301 AQYA 304

Length = 380

>gnl|CDD|163523 TIGR03811, tyr_de_CO2_Ent, tyrosine decarboxylase, Enterococcus type

 Score = 47.9 bits (114), Expect = 9e-06
 Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 13/141 (9%)

Query: 160 NTTSDSILVTLIAARD-----RALDAVGAENMHKLVVYGSDQT-HSTFAKVCKLAGVSPA 213
           N  +  I+  L +A D     +A  A   +++ KL  +   QT H ++ K   + G+   
Sbjct: 188 NMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLD 247

Query: 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVAN 273
            +  +P  VD+N+ +    L + +          L +   VG+T   AVD ++ +  + N
Sbjct: 248 QV--IPVPVDSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRN 305

Query: 274 EY---GI--WVHVDAAYAGSA 289
           +    GI  ++HVDAAY G  
Sbjct: 306 KLMKEGIYFYLHVDAAYGGYG 326

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis [Cellular processes, Adaptations to atypical conditions]. Length = 608

>gnl|CDD|166673 PLN03032, PLN03032, serine decarboxylase; Provisional

 Score = 47.1 bits (112), Expect = 1e-05
 Identities = 59/275 (21%), Positives = 108/275 (39%), Gaps = 39/275 (14%)

Query: 127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM 186
           S + E+ V+DW A + +L K   +     G I    ++  L  ++  R+   D +     
Sbjct: 64  SRQFEVGVLDWFARLWELEKDEYW-----GYITTCGTEGNLHGILVGREVFPDGI----- 113

Query: 187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV 246
               +Y S ++H +  K  ++  +    +  LP+       L   L +   +        
Sbjct: 114 ----LYASRESHYSVFKAARMYRMEAVKVPTLPSGEIDYDDLERALAKNRDK-------- 161

Query: 247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGI-----WVHVDAAYAGSACICPEFRHYLNG 301
           P  L   +GTT   AVD+++ +  +  E G      ++H D A  G           +  
Sbjct: 162 PAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTF 221

Query: 302 IERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQ 361
            + + S S S HK+L   + C     ++    VKALS + EYL    S   +++  ++  
Sbjct: 222 RKPIGSVSVSGHKFLGCPMPCGVALTRKKH--VKALSQNVEYLN---SRDATIMGSRNGH 276

Query: 362 VGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLA 396
                    L LW  LR  G   ++  ++  +R A
Sbjct: 277 A-------PLYLWYTLRRKGYRGIKRDVQHCMRNA 304

Length = 374

>gnl|CDD|223594 COG0520, csdA, Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

 Score = 42.3 bits (100), Expect = 4e-04
 Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 34/184 (18%)

Query: 172 AARDRALDAVGAENMHKLVVYGSDQTHS--TFAKVCKLAGVSPANIRALPTSVDANFSLS 229
           AAR+     + A+     +V+    T +    A+   L          + + ++ + ++ 
Sbjct: 70  AAREAVARFLNAD-SSDEIVFTRGTTEALNLVARG--LGRSLKPGDEIVVSDLEHHSNIV 126

Query: 230 P-QLLRRAVEADV------EAGLVPLFLCATVGTTST-----TAVDNV----EPLAEVAN 273
           P Q L +   A V      + GL+ L     + T  T     + V NV     P+ E+A 
Sbjct: 127 PWQELAKRTGAKVRVIPLDDDGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPVKEIAE 186

Query: 274 ---EYGIWVHVDAAYAGSACICPEFRHYLNGIER--VDSFSFSPHKWLLSYLDCCCLWVK 328
              E+G  V VDAA A          H    ++    D  +FS HKWLL       L+V+
Sbjct: 187 LAHEHGALVLVDAAQA--------AGHLPIDVQELGCDFLAFSGHKWLLGPTGIGVLYVR 238

Query: 329 QPGL 332
           +  L
Sbjct: 239 KELL 242

Length = 405

>gnl|CDD|215756 pfam00155, Aminotran_1_2, Aminotransferase class I and II

 Score = 41.5 bits (98), Expect = 6e-04
 Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 12/125 (9%)

Query: 163 SDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV 222
           + + +  LI                   +     T+ ++ ++ +LAG         P   
Sbjct: 74  AGANIEALIFL---------LRLNPGDAILVPAPTYPSYIRIFRLAGGEVVRY---PLYS 121

Query: 223 DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD 282
             +F L    L  A++   E   V L       T +   ++ +E L ++A E+ I + VD
Sbjct: 122 SNDFHLDFDALEAALKEATEGNKVVLHTSPHNPTGTVATLEELEKLLDLAKEHNILLLVD 181

Query: 283 AAYAG 287
            AYAG
Sbjct: 182 EAYAG 186

Length = 357

>gnl|CDD|130848 TIGR01788, Glu-decarb-GAD, glutamate decarboxylase

 Score = 41.2 bits (97), Expect = 9e-04
 Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 23/91 (25%)

Query: 251 CATVGTTSTTAVDNVEPLAEVANEYG------IWVHVDAAYAGSACICP--------EFR 296
              +GTT T   ++V+ L +  +EY       I +HVDAA  G   I P        +FR
Sbjct: 191 VCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGG--FIAPFVYPDLEWDFR 248

Query: 297 HYLNGIERVDSFSFSPHKWLLSYLDCCCLWV 327
                  RV S + S HK+ L Y      WV
Sbjct: 249 L-----PRVKSINVSGHKYGLVYPGVG--WV 272

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA). Length = 431

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	499
PLN02590	539	probable tyrosine decarboxylase	100.0
PLN02880	490	tyrosine decarboxylase	100.0
KOG0628	511	consensus Aromatic-L-amino-acid/L-histidine decarb	100.0
TIGR03799	522	NOD_PanD_pyr putative pyridoxal-dependent aspartat	100.0
PF00282	373	Pyridoxal_deC: Pyridoxal-dependent decarboxylase c	100.0
TIGR03811	608	tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcu	100.0
KOG0629	510	consensus Glutamate decarboxylase and related prot	100.0
COG0076	460	GadB Glutamate decarboxylase and related PLP-depen	100.0
PLN02263	470	serine decarboxylase	100.0
TIGR01788	431	Glu-decarb-GAD glutamate decarboxylase. This model	100.0
PLN03032	374	serine decarboxylase; Provisional	100.0
PRK02769	380	histidine decarboxylase; Provisional	100.0
cd06450	345	DOPA_deC_like DOPA decarboxylase family. This fami	100.0
KOG1383	491	consensus Glutamate decarboxylase/sphingosine phos	100.0
PRK13520	371	L-tyrosine decarboxylase; Provisional	100.0
TIGR03812	373	tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Membe	100.0
COG1104	386	NifS Cysteine sulfinate desulfinase/cysteine desul	100.0
COG0520	405	csdA Selenocysteine lyase/Cysteine desulfurase [Po	100.0
PRK04366	481	glycine dehydrogenase subunit 2; Validated	100.0
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	100.0
PRK05367	954	glycine dehydrogenase; Provisional	100.0
TIGR03531	444	selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium tr	99.97
PRK00451	447	glycine dehydrogenase subunit 1; Validated	99.97
TIGR03402	379	FeS_nifS cysteine desulfurase NifS. Members of thi	99.97
cd06453	373	SufS_like Cysteine desulfurase (SufS)-like. This f	99.97
PRK09295	406	bifunctional cysteine desulfurase/selenocysteine l	99.97
PRK10874	401	cysteine sulfinate desulfinase; Provisional	99.97
TIGR01977	376	am_tr_V_EF2568 cysteine desulfurase family protein	99.97
TIGR03392	398	FeS_syn_CsdA cysteine desulfurase, catalytic subun	99.97
TIGR01979	403	sufS cysteine desulfurases, SufS subfamily. This m	99.97
PLN02651	364	cysteine desulfurase	99.96
TIGR02006	402	IscS cysteine desulfurase IscS. This model represe	99.96
PLN02855	424	Bifunctional selenocysteine lyase/cysteine desulfu	99.96
TIGR03403	382	nifS_epsilon cysteine desulfurase, NifS family, ep	99.96
cd06451	356	AGAT_like Alanine-glyoxylate aminotransferase (AGA	99.96
cd00613	398	GDC-P Glycine cleavage system P-protein, alpha- an	99.96
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.95
PF00266	371	Aminotran_5: Aminotransferase class-V; InterPro: I	99.95
PRK09331	387	Sep-tRNA:Cys-tRNA synthetase; Provisional	99.95
PRK12566	954	glycine dehydrogenase; Provisional	99.95
PRK02948	381	cysteine desulfurase; Provisional	99.95
PLN02409	401	serine--glyoxylate aminotransaminase	99.95
PRK14012	404	cysteine desulfurase; Provisional	99.95
TIGR01814	406	kynureninase kynureninase. This model describes ky	99.94
TIGR01976	397	am_tr_V_VC1184 cysteine desulfurase family protein	99.94
cd06452	361	SepCysS Sep-tRNA:Cys-tRNA synthase. This family be	99.94
KOG1549	428	consensus Cysteine desulfurase NFS1 [Amino acid tr	99.94
TIGR02326	363	transamin_PhnW 2-aminoethylphosphonate--pyruvate t	99.94
TIGR02539	370	SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation	99.93
TIGR03301	355	PhnW-AepZ 2-aminoethylphosphonate aminotransferase	99.93
TIGR03235	353	DNA_S_dndA cysteine desulfurase DndA. This model d	99.93
PRK13479	368	2-aminoethylphosphonate--pyruvate transaminase; Pr	99.92
COG0436	393	Aspartate/tyrosine/aromatic aminotransferase [Amin	99.92
PLN02721	353	threonine aldolase	99.92
COG0075	383	Serine-pyruvate aminotransferase/archaeal aspartat	99.92
PRK07179	407	hypothetical protein; Provisional	99.91
PRK08361	391	aspartate aminotransferase; Provisional	99.91
PTZ00094	452	serine hydroxymethyltransferase; Provisional	99.91
PLN02724	805	Molybdenum cofactor sulfurase	99.91
cd00609	350	AAT_like Aspartate aminotransferase family. This f	99.91
COG2008	342	GLY1 Threonine aldolase [Amino acid transport and	99.91
TIGR01822	393	2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A lig	99.91
cd06502	338	TA_like Low-specificity threonine aldolase (TA). T	99.9
PRK03080	378	phosphoserine aminotransferase; Provisional	99.9
cd00616	352	AHBA_syn 3-amino-5-hydroxybenzoic acid synthase fa	99.9
PRK06108	382	aspartate aminotransferase; Provisional	99.9
PRK05764	393	aspartate aminotransferase; Provisional	99.9
PRK05367	954	glycine dehydrogenase; Provisional	99.9
cd06454	349	KBL_like KBL_like; this family belongs to the pyri	99.9
PLN02414	993	glycine dehydrogenase (decarboxylating)	99.89
COG0399	374	WecE Predicted pyridoxal phosphate-dependent enzym	99.89
COG1003	496	GcvP Glycine cleavage system protein P (pyridoxal-	99.89
TIGR01437	363	selA_rel uncharacterized pyridoxal phosphate-depen	99.89
COG0156	388	BioF 7-keto-8-aminopelargonate synthetase and rela	99.89
PRK06207	405	aspartate aminotransferase; Provisional	99.88
PLN00145	430	tyrosine/nicotianamine aminotransferase; Provision	99.88
PRK07324	373	transaminase; Validated	99.88
PTZ00433	412	tyrosine aminotransferase; Provisional	99.88
PRK06939	397	2-amino-3-ketobutyrate coenzyme A ligase; Provisio	99.88
PRK13580	493	serine hydroxymethyltransferase; Provisional	99.88
PLN00175	413	aminotransferase family protein; Provisional	99.87
PLN02187	462	rooty/superroot1	99.87
PLN02656	409	tyrosine transaminase	99.87
cd00611	355	PSAT_like Phosphoserine aminotransferase (PSAT) fa	99.87
cd00378	402	SHMT Serine-glycine hydroxymethyltransferase (SHMT	99.87
PLN02483	489	serine palmitoyltransferase	99.87
PTZ00377	481	alanine aminotransferase; Provisional	99.87
PRK13034	416	serine hydroxymethyltransferase; Reviewed	99.87
PRK07682	378	hypothetical protein; Validated	99.87
PRK05937	370	8-amino-7-oxononanoate synthase; Provisional	99.87
PRK11658	379	UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate amin	99.87
PRK13355	517	bifunctional HTH-domain containing protein/aminotr	99.87
PF02347	429	GDC-P: Glycine cleavage system P-protein; InterPro	99.87
PRK00011	416	glyA serine hydroxymethyltransferase; Reviewed	99.86
COG1168	388	MalY Bifunctional PLP-dependent enzyme with beta-c	99.86
cd00615	294	Orn_deC_like Ornithine decarboxylase family. This	99.86
PRK13238	460	tnaA tryptophanase/L-cysteine desulfhydrase, PLP-d	99.86
PLN02822	481	serine palmitoyltransferase	99.86
TIGR01265	403	tyr_nico_aTase tyrosine/nicotianamine aminotransfe	99.86
PRK07681	399	aspartate aminotransferase; Provisional	99.86
PLN00143	409	tyrosine/nicotianamine aminotransferase; Provision	99.86
TIGR03588	380	PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-amin	99.86
PRK05355	360	3-phosphoserine/phosphohydroxythreonine aminotrans	99.86
PRK08912	387	hypothetical protein; Provisional	99.86
PRK07777	387	aminotransferase; Validated	99.86
PRK08363	398	alanine aminotransferase; Validated	99.86
PRK06107	402	aspartate aminotransferase; Provisional	99.86
COG1103	382	Archaea-specific pyridoxal phosphate-dependent enz	99.86
PRK05958	385	8-amino-7-oxononanoate synthase; Reviewed	99.86
PF01276	417	OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain;	99.85
PRK13392	410	5-aminolevulinate synthase; Provisional	99.85
PRK09082	386	methionine aminotransferase; Validated	99.85
TIGR03537	350	DapC succinyldiaminopimelate transaminase. Note: t	99.85
PRK06225	380	aspartate aminotransferase; Provisional	99.85
TIGR01141	346	hisC histidinol-phosphate aminotransferase. Histid	99.85
PLN02231	534	alanine transaminase	99.85
PRK06290	410	aspartate aminotransferase; Provisional	99.85
TIGR00461	939	gcvP glycine dehydrogenase (decarboxylating). This	99.85
PRK12414	384	putative aminotransferase; Provisional	99.85
TIGR01821	402	5aminolev_synth 5-aminolevulinic acid synthase. Th	99.85
PRK07568	397	aspartate aminotransferase; Provisional	99.85
PRK05957	389	aspartate aminotransferase; Provisional	99.85
TIGR01264	401	tyr_amTase_E tyrosine aminotransferase, eukaryotic	99.85
PRK07309	391	aromatic amino acid aminotransferase; Validated	99.85
PF01041	363	DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransfe	99.85
PRK08960	387	hypothetical protein; Provisional	99.85
TIGR01366	361	serC_3 phosphoserine aminotransferase, putative. T	99.84
PRK06348	384	aspartate aminotransferase; Provisional	99.84
TIGR01825	385	gly_Cac_T_rel pyridoxal phosphate-dependent acyltr	99.84
KOG1368	384	consensus Threonine aldolase [Amino acid transport	99.84
KOG0259	447	consensus Tyrosine aminotransferase [Amino acid tr	99.84
PRK15029	755	arginine decarboxylase; Provisional	99.84
PRK07337	388	aminotransferase; Validated	99.84
PRK07550	386	hypothetical protein; Provisional	99.84
PRK09064	407	5-aminolevulinate synthase; Validated	99.84
TIGR03540	383	DapC_direct LL-diaminopimelate aminotransferase. T	99.84
PRK05942	394	aspartate aminotransferase; Provisional	99.84
PLN02376	496	1-aminocyclopropane-1-carboxylate synthase	99.84
PLN03226	475	serine hydroxymethyltransferase; Provisional	99.84
PRK08056	356	threonine-phosphate decarboxylase; Provisional	99.84
PRK08068	389	transaminase; Reviewed	99.83
PLN03227	392	serine palmitoyltransferase-like protein; Provisio	99.83
TIGR01364	349	serC_1 phosphoserine aminotransferase. This model	99.83
PRK14807	351	histidinol-phosphate aminotransferase; Provisional	99.83
TIGR00858	360	bioF 8-amino-7-oxononanoate synthase. This model r	99.83
PLN02450	468	1-aminocyclopropane-1-carboxylate synthase	99.83
PRK09265	404	aminotransferase AlaT; Validated	99.83
PRK08861	388	cystathionine gamma-synthase; Provisional	99.83
PRK08636	403	aspartate aminotransferase; Provisional	99.83
TIGR01328	391	met_gam_lyase methionine gamma-lyase. This model d	99.83
PRK07504	398	O-succinylhomoserine sulfhydrylase; Reviewed	99.83
PRK09276	385	LL-diaminopimelate aminotransferase; Provisional	99.83
PRK09147	396	succinyldiaminopimelate transaminase; Provisional	99.83
PRK06767	386	methionine gamma-lyase; Provisional	99.83
PRK05968	389	hypothetical protein; Provisional	99.83
PRK06358	354	threonine-phosphate decarboxylase; Provisional	99.83
PLN02955	476	8-amino-7-oxononanoate synthase	99.83
COG0403	450	GcvP Glycine cleavage system protein P (pyridoxal-	99.83
PRK10534	333	L-threonine aldolase; Provisional	99.82
PRK07366	388	succinyldiaminopimelate transaminase; Validated	99.82
PRK08134	433	O-acetylhomoserine aminocarboxypropyltransferase;	99.82
PF00155	363	Aminotran_1_2: Aminotransferase class I and II 1-a	99.82
PRK07683	387	aminotransferase A; Validated	99.82
cd00617	431	Tnase_like Tryptophanase family (Tnase). This fami	99.82
PRK06836	394	aspartate aminotransferase; Provisional	99.82
PRK05387	353	histidinol-phosphate aminotransferase; Provisional	99.82
PRK13393	406	5-aminolevulinate synthase; Provisional	99.82
cd00614	369	CGS_like CGS_like: Cystathionine gamma-synthase is	99.82
PRK08133	390	O-succinylhomoserine sulfhydrylase; Validated	99.82
KOG2862	385	consensus Alanine-glyoxylate aminotransferase AGT1	99.82
PRK05613	437	O-acetylhomoserine aminocarboxypropyltransferase;	99.82
PRK07811	388	cystathionine gamma-synthase; Provisional	99.82
TIGR02379	376	ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase	99.82
PRK06855	433	aminotransferase; Validated	99.82
PRK04870	356	histidinol-phosphate aminotransferase; Provisional	99.81
TIGR01329	378	cysta_beta_ly_E cystathionine beta-lyase, eukaryot	99.81
PLN02509	464	cystathionine beta-lyase	99.81
PRK08776	405	cystathionine gamma-synthase; Provisional	99.81
PLN02607	447	1-aminocyclopropane-1-carboxylate synthase	99.81
PRK06234	400	methionine gamma-lyase; Provisional	99.81
PRK07810	403	O-succinylhomoserine sulfhydrylase; Provisional	99.81
PRK08574	385	cystathionine gamma-synthase; Provisional	99.8
PRK08249	398	cystathionine gamma-synthase; Provisional	99.8
PRK09028	394	cystathionine beta-lyase; Provisional	99.8
TIGR03538	393	DapC_gpp succinyldiaminopimelate transaminase. Thi	99.8
PRK00950	361	histidinol-phosphate aminotransferase; Validated	99.8
PRK08064	390	cystathionine beta-lyase; Provisional	99.8
PRK08248	431	O-acetylhomoserine aminocarboxypropyltransferase;	99.8
PRK07050	394	cystathionine beta-lyase; Provisional	99.8
PRK01688	351	histidinol-phosphate aminotransferase; Provisional	99.8
TIGR01324	377	cysta_beta_ly_B cystathionine beta-lyase, bacteria	99.79
PRK09148	405	aminotransferase; Validated	99.79
PRK03158	359	histidinol-phosphate aminotransferase; Provisional	99.79
PRK07812	436	O-acetylhomoserine aminocarboxypropyltransferase;	99.79
PRK07503	403	methionine gamma-lyase; Provisional	99.79
PRK15399	713	lysine decarboxylase LdcC; Provisional	99.79
PRK06084	425	O-acetylhomoserine aminocarboxypropyltransferase;	99.79
PRK15407	438	lipopolysaccharide biosynthesis protein RfbH; Prov	99.79
PRK07269	364	cystathionine gamma-synthase; Reviewed	99.79
PRK06176	380	cystathionine gamma-synthase/cystathionine beta-ly	99.79
PRK15481	431	transcriptional regulatory protein PtsJ; Provision	99.79
PRK08114	395	cystathionine beta-lyase; Provisional	99.79
PRK15400	714	lysine decarboxylase CadA; Provisional	99.79
PRK08175	395	aminotransferase; Validated	99.79
PLN02242	418	methionine gamma-lyase	99.79
PRK02731	367	histidinol-phosphate aminotransferase; Validated	99.79
PRK05994	427	O-acetylhomoserine aminocarboxypropyltransferase;	99.79
PRK08045	386	cystathionine gamma-synthase; Provisional	99.79
PRK08247	366	cystathionine gamma-synthase; Reviewed	99.79
PRK13578	720	ornithine decarboxylase; Provisional	99.79
PRK05166	371	histidinol-phosphate aminotransferase; Provisional	99.78
PRK07908	349	hypothetical protein; Provisional	99.78
PRK04635	354	histidinol-phosphate aminotransferase; Provisional	99.78
PRK11706	375	TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisio	99.78
PRK07671	377	cystathionine beta-lyase; Provisional	99.78
KOG0257	420	consensus Kynurenine aminotransferase, glutamine t	99.78
TIGR01325	380	O_suc_HS_sulf O-succinylhomoserine sulfhydrylase.	99.78
PRK05939	397	hypothetical protein; Provisional	99.78
TIGR02080	382	O_succ_thio_ly O-succinylhomoserine (thiol)-lyase.	99.78
PLN03026	380	histidinol-phosphate aminotransferase; Provisional	99.77
PLN02672	1082	methionine S-methyltransferase	99.77
PLN02271	586	serine hydroxymethyltransferase	99.77
PRK02610	374	histidinol-phosphate aminotransferase; Provisional	99.77
PRK09105	370	putative aminotransferase; Provisional	99.77
PRK06702	432	O-acetylhomoserine aminocarboxypropyltransferase;	99.76
TIGR01140	330	L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxy	99.76
PRK06434	384	cystathionine gamma-lyase; Validated	99.76
PLN02368	407	alanine transaminase	99.76
PRK03317	368	histidinol-phosphate aminotransferase; Provisional	99.76
TIGR02618	450	tyr_phenol_ly tyrosine phenol-lyase. This model de	99.76
PRK00854	401	rocD ornithine--oxo-acid transaminase; Reviewed	99.75
PRK07582	366	cystathionine gamma-lyase; Validated	99.75
PRK07590	409	L,L-diaminopimelate aminotransferase; Validated	99.75
PRK04781	364	histidinol-phosphate aminotransferase; Provisional	99.75
PRK03321	352	putative aminotransferase; Provisional	99.75
PRK03244	398	argD acetylornithine aminotransferase; Provisional	99.75
PRK06460	376	hypothetical protein; Provisional	99.75
PRK01533	366	histidinol-phosphate aminotransferase; Validated	99.75
PRK06425	332	histidinol-phosphate aminotransferase; Validated	99.75
PRK08153	369	histidinol-phosphate aminotransferase; Provisional	99.75
TIGR03576	346	pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158	99.74
TIGR01326	418	OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model d	99.74
cd00610	413	OAT_like Acetyl ornithine aminotransferase family.	99.74
PRK12566	954	glycine dehydrogenase; Provisional	99.74
PRK05967	395	cystathionine beta-lyase; Provisional	99.73
cd01494	170	AAT_I Aspartate aminotransferase (AAT) superfamily	99.73
PLN02452	365	phosphoserine transaminase	99.73
PTZ00376	404	aspartate aminotransferase; Provisional	99.73
TIGR01365	374	serC_2 phosphoserine aminotransferase, Methanosarc	99.73
PRK05839	374	hypothetical protein; Provisional	99.73
PRK09275	527	aspartate aminotransferase; Provisional	99.73
PRK14809	357	histidinol-phosphate aminotransferase; Provisional	99.72
PRK04073	396	rocD ornithine--oxo-acid transaminase; Provisional	99.72
PRK04311	464	selenocysteine synthase; Provisional	99.72
PRK13237	460	tyrosine phenol-lyase; Provisional	99.72
PRK07505	402	hypothetical protein; Provisional	99.72
PRK07865	364	N-succinyldiaminopimelate aminotransferase; Review	99.72
TIGR03539	357	DapC_actino succinyldiaminopimelate transaminase.	99.72
TIGR03246	397	arg_catab_astC succinylornithine transaminase fami	99.71
TIGR00474	454	selA seryl-tRNA(sec) selenium transferase. In bact	99.71
PTZ00125	400	ornithine aminotransferase-like protein; Provision	99.71
PRK09440	416	avtA valine--pyruvate transaminase; Provisional	99.71
COG1167	459	ARO8 Transcriptional regulators containing a DNA-b	99.71
TIGR03801	521	asp_4_decarbox aspartate 4-decarboxylase. This enz	99.7
KOG1359	417	consensus Glycine C-acetyltransferase/2-amino-3-ke	99.7
PF01212	290	Beta_elim_lyase: Beta-eliminating lyase; InterPro:	99.7
PRK07392	360	threonine-phosphate decarboxylase; Validated	99.7
TIGR00707	379	argD acetylornithine and succinylornithine aminotr	99.7
PRK08637	388	hypothetical protein; Provisional	99.69
PRK09257	396	aromatic amino acid aminotransferase; Provisional	99.69
PF01053	386	Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent	99.68
PRK03967	337	histidinol-phosphate aminotransferase; Provisional	99.68
KOG0256	471	consensus 1-aminocyclopropane-1-carboxylate syntha	99.68
PRK14808	335	histidinol-phosphate aminotransferase; Provisional	99.67
TIGR01885	401	Orn_aminotrans ornithine aminotransferase. This mo	99.67
COG0079	356	HisC Histidinol-phosphate/aromatic aminotransferas	99.67
PRK01278	389	argD acetylornithine transaminase protein; Provisi	99.67
COG2873	426	MET17 O-acetylhomoserine sulfhydrylase [Amino acid	99.66
PF00464	399	SHMT: Serine hydroxymethyltransferase; InterPro: I	99.66
PRK02936	377	argD acetylornithine aminotransferase; Provisional	99.66
KOG1360	570	consensus 5-aminolevulinate synthase [Coenzyme tra	99.66
PRK05093	403	argD bifunctional N-succinyldiaminopimelate-aminot	99.65
PRK02627	396	acetylornithine aminotransferase; Provisional	99.65
PF05889	389	SLA_LP_auto_ag: Soluble liver antigen/liver pancre	99.65
PLN02397	423	aspartate transaminase	99.65
COG0112	413	GlyA Glycine/serine hydroxymethyltransferase [Amin	99.65
PRK08354	311	putative aminotransferase; Provisional	99.64
PLN02624	474	ornithine-delta-aminotransferase	99.64
PRK07049	427	methionine gamma-lyase; Validated	99.64
PRK12462	364	phosphoserine aminotransferase; Provisional	99.64
TIGR03542	402	DAPAT_plant LL-diaminopimelate aminotransferase. T	99.64
PRK03715	395	argD acetylornithine transaminase protein; Provisi	99.63
PRK12381	406	bifunctional succinylornithine transaminase/acetyl	99.62
PRK06959	339	putative threonine-phosphate decarboxylase; Provis	99.62
PRK05664	330	threonine-phosphate decarboxylase; Reviewed	99.6
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	99.6
COG3844	407	Kynureninase [Amino acid transport and metabolism]	99.59
PRK05964	423	adenosylmethionine--8-amino-7-oxononanoate transam	99.58
COG0626	396	MetC Cystathionine beta-lyases/cystathionine gamma	99.58
PRK09264	425	diaminobutyrate--2-oxoglutarate aminotransferase;	99.57
PRK11522	459	putrescine--2-oxoglutarate aminotransferase; Provi	99.56
COG1982	557	LdcC Arginine/lysine/ornithine decarboxylases [Ami	99.55
PRK04260	375	acetylornithine aminotransferase; Provisional	99.55
KOG0630	838	consensus Predicted pyridoxal-dependent decarboxyl	99.53
PRK08117	433	4-aminobutyrate aminotransferase; Provisional	99.52
TIGR03372	442	putres_am_tran putrescine aminotransferase. Member	99.51
KOG1357	519	consensus Serine palmitoyltransferase [Posttransla	99.5
PLN02760	504	4-aminobutyrate:pyruvate transaminase	99.5
KOG0634	472	consensus Aromatic amino acid aminotransferase and	99.49
COG4992	404	ArgD Ornithine/acetylornithine aminotransferase [A	99.49
PRK05769	441	4-aminobutyrate aminotransferase; Provisional	99.49
PRK12403	460	putative aminotransferase; Provisional	99.49
COG0160	447	GabT 4-aminobutyrate aminotransferase and related	99.49
PRK04612	408	argD acetylornithine transaminase protein; Provisi	99.48
COG0001	432	HemL Glutamate-1-semialdehyde aminotransferase [Co	99.48
PRK08360	443	4-aminobutyrate aminotransferase; Provisional	99.47
PRK06058	443	4-aminobutyrate aminotransferase; Provisional	99.47
TIGR02407	412	ectoine_ectB diaminobutyrate--2-oxoglutarate amino	99.46
PRK06541	460	hypothetical protein; Provisional	99.45
PRK08088	425	4-aminobutyrate aminotransferase; Validated	99.45
TIGR00713	423	hemL glutamate-1-semialdehyde-2,1-aminomutase. Thi	99.45
KOG0053	409	consensus Cystathionine beta-lyases/cystathionine	99.45
TIGR02617	467	tnaA_trp_ase tryptophanase, leader peptide-associa	99.43
TIGR00700	420	GABAtrnsam 4-aminobutyrate aminotransferase, proka	99.43
PLN00144	382	acetylornithine transaminase	99.41
PRK07678	451	aminotransferase; Validated	99.41
PRK13360	442	omega amino acid--pyruvate transaminase; Provision	99.41
PRK00062	426	glutamate-1-semialdehyde aminotransferase; Provisi	99.4
PRK06105	460	aminotransferase; Provisional	99.4
PRK06777	421	4-aminobutyrate aminotransferase; Provisional	99.4
PRK07495	425	4-aminobutyrate aminotransferase; Provisional	99.4
PRK08593	445	4-aminobutyrate aminotransferase; Provisional	99.39
PRK12389	428	glutamate-1-semialdehyde aminotransferase; Provisi	99.38
PRK09221	445	beta alanine--pyruvate transaminase; Provisional	99.38
PRK05639	457	4-aminobutyrate aminotransferase; Provisional	99.38
PRK05965	459	hypothetical protein; Provisional	99.38
PRK06062	451	hypothetical protein; Provisional	99.38
PLN02482	474	glutamate-1-semialdehyde 2,1-aminomutase	99.37
TIGR00709	442	dat 2,4-diaminobutyrate 4-transaminases. This fami	99.35
PRK04013	364	argD acetylornithine/acetyl-lysine aminotransferas	99.35
KOG0258	475	consensus Alanine aminotransferase [Amino acid tra	99.35
PRK06149	972	hypothetical protein; Provisional	99.34
PRK09792	421	4-aminobutyrate transaminase; Provisional	99.34
PRK07482	461	hypothetical protein; Provisional	99.33
PRK07480	456	putative aminotransferase; Validated	99.33
PRK07036	466	hypothetical protein; Provisional	99.33
PRK00615	433	glutamate-1-semialdehyde aminotransferase; Provisi	99.33
COG3977	417	Alanine-alpha-ketoisovalerate (or valine-pyruvate)	99.31
PRK07481	449	hypothetical protein; Provisional	99.31
PRK06918	451	4-aminobutyrate aminotransferase; Reviewed	99.3
TIGR00508	427	bioA adenosylmethionine-8-amino-7-oxononanoate tra	99.29
PRK06173	429	adenosylmethionine--8-amino-7-oxononanoate transam	99.29
PRK06148	1013	hypothetical protein; Provisional	99.29
PRK06917	447	hypothetical protein; Provisional	99.29
PRK06943	453	adenosylmethionine--8-amino-7-oxononanoate transam	99.28
TIGR00699	464	GABAtrns_euk 4-aminobutyrate aminotransferase, euk	99.28
PRK06082	459	4-aminobutyrate aminotransferase; Provisional	99.28
PRK06938	464	diaminobutyrate--2-oxoglutarate aminotransferase;	99.27
PRK07483	443	hypothetical protein; Provisional	99.27
PRK07046	453	aminotransferase; Validated	99.26
PRK07030	466	adenosylmethionine--8-amino-7-oxononanoate transam	99.24
PRK08297	443	L-lysine aminotransferase; Provisional	99.24
PRK07986	428	adenosylmethionine--8-amino-7-oxononanoate transam	99.24
PRK06931	459	diaminobutyrate--2-oxoglutarate aminotransferase;	99.23
PRK06916	460	adenosylmethionine--8-amino-7-oxononanoate transam	99.23
PRK08742	472	adenosylmethionine--8-amino-7-oxononanoate transam	99.21
KOG2467	477	consensus Glycine/serine hydroxymethyltransferase	99.2
PRK05630	422	adenosylmethionine--8-amino-7-oxononanoate transam	99.17
KOG1358	467	consensus Serine palmitoyltransferase [Posttransla	99.17
TIGR03251	431	LAT_fam L-lysine 6-transaminase. Characterized mem	99.17
COG1932	365	SerC Phosphoserine aminotransferase [Coenzyme meta	99.15
PRK06209	431	glutamate-1-semialdehyde 2,1-aminomutase; Provisio	99.14
COG0161	449	BioA Adenosylmethionine-8-amino-7-oxononanoate ami	99.08
COG3033	471	TnaA Tryptophanase [Amino acid transport and metab	99.05
KOG3843	432	consensus Predicted serine hydroxymethyltransferas	98.98
COG1448	396	TyrB Aspartate/tyrosine/aromatic aminotransferase	98.98
KOG3846	465	consensus L-kynurenine hydrolase [Amino acid trans	98.92
KOG1404	442	consensus Alanine-glyoxylate aminotransferase AGT2	98.9
KOG1401	433	consensus Acetylornithine aminotransferase [Amino	98.88
PLN02974	817	adenosylmethionine-8-amino-7-oxononanoate transami	98.85
KOG0633	375	consensus Histidinol phosphate aminotransferase [A	98.81
COG1921	395	SelA Selenocysteine synthase [seryl-tRNASer seleni	98.8
KOG2040	1001	consensus Glycine dehydrogenase (decarboxylating)	98.78
PF12897	425	Aminotran_MocR: Alanine-glyoxylate amino-transfera	98.77
KOG1402	427	consensus Ornithine aminotransferase [Amino acid t	98.77
PF00202	339	Aminotran_3: Aminotransferase class-III; InterPro:	98.74
PF03841	367	SelA: L-seryl-tRNA selenium transferase; InterPro:	98.5
KOG2790	370	consensus Phosphoserine aminotransferase [Coenzyme	98.25
PF06838	403	Met_gamma_lyase: Methionine gamma-lyase ; InterPro	98.19
KOG1403	452	consensus Predicted alanine-glyoxylate aminotransf	97.53
KOG1412	410	consensus Aspartate aminotransferase/Glutamic oxal	97.48
KOG1405	484	consensus 4-aminobutyrate aminotransferase [Amino	97.19
COG4100	416	Cystathionine beta-lyase family protein involved i	96.89
KOG1411	427	consensus Aspartate aminotransferase/Glutamic oxal	96.43
PF04864	363	Alliinase_C: Allinase; InterPro: IPR006948 Allicin	96.14
PLN02994	153	1-aminocyclopropane-1-carboxylate synthase	91.87
COG2515	323	Acd 1-aminocyclopropane-1-carboxylate deaminase [A	86.56

>PLN02590 probable tyrosine decarboxylase

Probab=100.00  E-value=3.6e-96  Score=753.66  Aligned_cols=485  Identities=53%  Similarity=1.004  Sum_probs=453.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCC
Q 010842           14 FKPLDAQEFRKQAHQMVDFIADYYQNIES----YPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLS   89 (499)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~   89 (499)
                      +.+|+.++||+++++++|.+.+|++++.+    +||.+.++|++++..++.++|++|++++++++++.+.+.|+.++|+|
T Consensus        51 ~~~m~~~~~r~~~~~~~d~i~~~~~~~~~~~~~~pv~~~~~p~~l~~~l~~~~P~~g~~~~~il~~~~~~i~p~~~~~~h  130 (539)
T PLN02590         51 MKPMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKELLDDVSKKIMPGITHWQS  130 (539)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCChHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCcCCC
Confidence            56699999999999999999999999886    79999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHH
Q 010842           90 PNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVT  169 (499)
Q Consensus        90 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~a  169 (499)
                      |+|+||+|++++++++++|++++++|++...|..+|+++++|+++++||++++|+|+.++.++.++|+||+|||+||++|
T Consensus       131 P~f~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~a  210 (539)
T PLN02590        131 PSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVV  210 (539)
T ss_pred             CCeeEeccCCCcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999876544456899999999999999


Q ss_pred             HHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEE
Q 010842          170 LIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLF  249 (499)
Q Consensus       170 l~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~  249 (499)
                      |.+||++..+..+..+.++.+||+|+++|+|+.|+++++|+|.++++.||+|.+++++||+++|+++|++++++|.+|++
T Consensus       211 l~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~  290 (539)
T PLN02590        211 VLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFF  290 (539)
T ss_pred             HHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEE
Confidence            99999987766555667889999999999999999999999999999999986556899999999999999999999999


Q ss_pred             EEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeC
Q 010842          250 LCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQ  329 (499)
Q Consensus       250 vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~  329 (499)
                      ||+|+|||.+|++|||++|+++|++||+||||||||||+++++|++++++.|+++|||+++|+|||+++|++||++++|+
T Consensus       291 VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~  370 (539)
T PLN02590        291 ICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKD  370 (539)
T ss_pred             EEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 010842          330 PGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRF  409 (499)
Q Consensus       330 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~  409 (499)
                      +..+.+++...+.|+.......+...++.+|++++|||++++++|++|+.+|.+|+++++++++++|++|.+.|++.|+|
T Consensus       371 ~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~f  450 (539)
T PLN02590        371 RYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSF  450 (539)
T ss_pred             HHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence            98888899999999976433333467899999999999999999999999999999999999999999999999999999


Q ss_pred             EEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          410 EIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       410 ~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      +++.+|.+++||||+.+.. .++++.+.+|++|.++|+++|.++++++.++|+.+||+|++||.|+++||+.+++.|.+.
T Consensus       451 el~~~~~l~iVcFr~~~~~-~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~  529 (539)
T PLN02590        451 EVVTTRYFSLVCFRLAPVD-GDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKH  529 (539)
T ss_pred             EEecCCceEEEEEEecCCC-CCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence            9999999999999998743 233456889999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhccCCC
Q 010842          490 ADRLFKGSAF  499 (499)
Q Consensus       490 ~~~l~~~~~~  499 (499)
                      +.++.+..-|
T Consensus       530 a~~~~~~~~~  539 (539)
T PLN02590        530 ASKFTRNDHY  539 (539)
T ss_pred             HHHhcccCCC
Confidence            9998776544

>PLN02880 tyrosine decarboxylase

Probab=100.00  E-value=1.4e-90  Score=713.73  Aligned_cols=481  Identities=58%  Similarity=1.067  Sum_probs=449.3

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCcccccc
Q 010842           16 PLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAF   95 (499)
Q Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~   95 (499)
                      .||.++||+.++++++.+.+|+++.+++||.+..+|+++++.++..+|++|.+.+++++++.+.+.|+.++|+||+|+||
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~~p~~l~~~~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~~~   88 (490)
T PLN02880          9 PMDAEQLRECGHRMVDFIADYYKSIENFPVLSQVQPGYLRELLPDSAPNQPETLDQVLDDVQAKILPGVTHWQSPNYFAY   88 (490)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEe
Confidence            59999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHH
Q 010842           96 FPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARD  175 (499)
Q Consensus        96 ~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~  175 (499)
                      +|++++++++++|++++.+|+++..|..+|..+++|+++++|+++++|+|+.++.++.++|++|+|||+||++||++||+
T Consensus        89 ~~~~~~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~  168 (490)
T PLN02880         89 YPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARD  168 (490)
T ss_pred             ccCCCcHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999876544557899999999999999999999


Q ss_pred             HHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecC
Q 010842          176 RALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVG  255 (499)
Q Consensus       176 ~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~g  255 (499)
                      +..+..+..+.++.+||+|+.+|+|+.|+++++|+|.++++.||+|.+++++||+++|+++|++++++|.+|++||+|+|
T Consensus       169 ~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataG  248 (490)
T PLN02880        169 RVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVG  248 (490)
T ss_pred             HHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecC
Confidence            88766555566788999999999999999999999999999999987556899999999999999999999999999999


Q ss_pred             CCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHH
Q 010842          256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVK  335 (499)
Q Consensus       256 tt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~  335 (499)
                      ||.+|++|||++|+++|++||+|+|||||||+++++++++++.+.|+++|||+++|+|||+++|++||++++|++..+.+
T Consensus       249 TT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~  328 (490)
T PLN02880        249 TTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQ  328 (490)
T ss_pred             CCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999887778


Q ss_pred             hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842          336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR  415 (499)
Q Consensus       336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~  415 (499)
                      .+...++|+...........++.++++++|||++++++|++++.+|.+|+++++++++++++++.+.|++.|+++++.+|
T Consensus       329 ~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~  408 (490)
T PLN02880        329 SLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPR  408 (490)
T ss_pred             HHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC
Confidence            88899999977543333457888999999999999999999999999999999999999999999999999999999999


Q ss_pred             CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       416 ~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      .+++|||++.+.. .+++..+.+|+++.++|.++|.++++.+.++|+.++|+|+.||.+|++||+.+++.|.++++++..
T Consensus       409 ~~~iv~Fr~~~~~-~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~  487 (490)
T PLN02880        409 IFSLVCFRLVPPK-NNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLG  487 (490)
T ss_pred             ceEEEEEEEeCCC-CChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            9999999998743 234456889999999999999999999999999999999999999999999999999999999877


Q ss_pred             cC
Q 010842          496 GS  497 (499)
Q Consensus       496 ~~  497 (499)
                      ++
T Consensus       488 ~~  489 (490)
T PLN02880        488 KS  489 (490)
T ss_pred             hc
Confidence            65

>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]

Probab=100.00  E-value=3.1e-86  Score=631.68  Aligned_cols=464  Identities=52%  Similarity=0.936  Sum_probs=442.8

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccC
Q 010842           17 LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFF   96 (499)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~   96 (499)
                      |+.++||+.+++++|.+++|+++++++||.|.++|++++..+|.+.|+.++++++|++++.+.++|+.+||+||+|++|+
T Consensus         1 Md~~efR~~gk~mVD~IadY~e~ir~r~v~P~v~PGYl~~llP~~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~fhAyf   80 (511)
T KOG0628|consen    1 MDSEEFREEGKEMVDYIADYLENIRKRRVLPDVKPGYLRDLLPSKAPEKPESWEDILGDLEKIIMPGITHWQHPHFHAYF   80 (511)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCcchhhhhCCCCCCCChhhHHHHHHHHHHHccCCCcccCCCceeeEc
Confidence            68899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCcccc--CCCccEEEcCChHHHHHHHHHHHH
Q 010842           97 PATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMF--SGTGGGVIQNTTSDSILVTLIAAR  174 (499)
Q Consensus        97 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~--~~~~~g~~t~ggt~A~~~al~~ar  174 (499)
                      |++.++|++++|+++..++.-++.|..+|+.++||..+++||++++++|..|..  .|.|||++.+++|++++.++++||
T Consensus        81 pa~~s~~siladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR  160 (511)
T KOG0628|consen   81 PAGNSYPSILADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAAR  160 (511)
T ss_pred             cCccchHHHHHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999998764  448899999999999999999999


Q ss_pred             HHHHhHhhhh--------ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCc
Q 010842          175 DRALDAVGAE--------NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV  246 (499)
Q Consensus       175 ~~~~~~~~~~--------g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~  246 (499)
                      ..+..+.++.        -..+.++|+|+++|.|++|+|.+.|+   .++.+|+|.  +|.|+.+.|+++|++|.++|.+
T Consensus       161 ~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~V---klR~l~td~--n~~mr~~~L~~AIe~D~arGlI  235 (511)
T KOG0628|consen  161 TEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGV---KLRALPTDE--NFGMRGDTLRKAIEEDIARGLI  235 (511)
T ss_pred             HHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcce---eEEEeeccc--CcCCCHHHHHHHHHHHHhCCCc
Confidence            9888776533        13588999999999999999999999   999999986  6899999999999999999999


Q ss_pred             cEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEE
Q 010842          247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLW  326 (499)
Q Consensus       247 p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~  326 (499)
                      ||+|++|.|||.++++|+|++|..+|+++|+|||||+||+|.++.||+++.++.|++.|||+.+++|||+.+..+|+.+|
T Consensus       236 Pf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lW  315 (511)
T KOG0628|consen  236 PFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLW  315 (511)
T ss_pred             cEEEEEeecCccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecce
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010842          327 VKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD  406 (499)
Q Consensus       327 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~  406 (499)
                      +||...+..++..+|-||.+..+.  ...||+.|++..||||+++++|+.++.+|.+++++.++++.++++.+.+.+.+.
T Consensus       316 vkd~~~~~~~~~vdp~yL~h~~~~--~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d  393 (511)
T KOG0628|consen  316 VKDGTKLSRAFNVDPLYLKHAYQG--SAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRAD  393 (511)
T ss_pred             eecCceeeeeeecChHhhcchhhc--cCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            999988888999999999987654  378999999999999999999999999999999999999999999999999999


Q ss_pred             CCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842          407 PRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI  486 (499)
Q Consensus       407 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l  486 (499)
                      +.||++++..++.||||..+.        |..|++|+++++.+|.+++.++.+.|+.+||++++.+.++++||++.++.|
T Consensus       394 ~~FE~~~~~~lgLvcFRlk~~--------N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~~I  465 (511)
T KOG0628|consen  394 PRFEIVNKRILGLVCFRLKGD--------NEINEALLNRLNSSGRIHLVPASLHGKFVLRFAVCSPLTNESDIDEAWKII  465 (511)
T ss_pred             CcceeecccccceeEEeecCC--------cHHHHHHHHHHHhcCcEEEEEeeecceEEEEEEecCCCCcHHHHHHHHHHH
Confidence            999999999999999999874        788999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhc
Q 010842          487 MEGADRLFK  495 (499)
Q Consensus       487 ~~~~~~l~~  495 (499)
                      .+.+..+..
T Consensus       466 ~~~a~~l~~  474 (511)
T KOG0628|consen  466 FEAADELFE  474 (511)
T ss_pred             HHHHHHHHh
Confidence            999888543

>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase

Probab=100.00  E-value=2.1e-74  Score=594.10  Aligned_cols=453  Identities=22%  Similarity=0.333  Sum_probs=387.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHh--cCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCC
Q 010842           20 QEFRKQAHQMVDFIADYYQN--IESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFP   97 (499)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~   97 (499)
                      ..+..+.+++.+.+++|+.+  ....|+.+...+..    ....+|++|.+.+++++++.+.+.+++++|+||+|+||++
T Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP~f~g~~~   97 (522)
T TIGR03799        22 STLGRIEQKISQNLAGFLQEHIVAIEKPLSEIEKDF----SSAEIPEQPTFVSEHTQFLLDKLVAHSVHTASPSFIGHMT   97 (522)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhccCCCchhhhhcc----cccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCeEEecc
Confidence            56777888888888888777  33345544433322    2457899999999999999999999999999999999999


Q ss_pred             CC-CChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCC-CCccc-----cCCCccEEEcCChHHHHHHHH
Q 010842           98 AT-VSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKL-PKTFM-----FSGTGGGVIQNTTSDSILVTL  170 (499)
Q Consensus        98 ~~-~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~-~~~~~-----~~~~~~g~~t~ggt~A~~~al  170 (499)
                      ++ +.....+++ +.+++|+|...|+.||+++++|+++++||+++++. ++.++     ....++|++|+|||+||++||
T Consensus        98 ~~~p~~~~~l~~-l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al  176 (522)
T TIGR03799        98 SALPYFMLPLSK-LMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITAL  176 (522)
T ss_pred             CCCchHHHHHHH-HHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHH
Confidence            96 344445777 67789999999999999999999999999999963 22211     112357999999999999999


Q ss_pred             HHHHHHHHhHhh------hh---------ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHH
Q 010842          171 IAARDRALDAVG------AE---------NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRR  235 (499)
Q Consensus       171 ~~ar~~~~~~~~------~~---------g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~  235 (499)
                      ++||++..+..+      .+         +.++.+||+|+.+|+|+.|+++++|+|.++++.||+|++  ++||+++|++
T Consensus       177 ~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~--g~~d~~~L~~  254 (522)
T TIGR03799       177 WVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDAN--NRIDVDALRD  254 (522)
T ss_pred             HHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCC--CcCCHHHHHH
Confidence            999998764321      12         235789999999999999999999999989999999875  4999999999


Q ss_pred             HHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccccc
Q 010842          236 AVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKW  315 (499)
Q Consensus       236 ~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~  315 (499)
                      +|+++.+++.+|++|++++|||.+|++|||++|+++|+++|+|+|||||||++.++++++++++.+++++||+++|+|||
T Consensus       255 ~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~  334 (522)
T TIGR03799       255 KCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQ  334 (522)
T ss_pred             HHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhc
Confidence            99999888999999999999999999999999999999999999999999999888999999999999999999999999


Q ss_pred             ccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHH
Q 010842          316 LLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRL  395 (499)
Q Consensus       316 l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~  395 (499)
                      +++|++||++++|++..+ +.+...+.|+....     ..++.++++++||++.++++|++++.+|.+|+++++++.+++
T Consensus       335 l~~P~g~G~llvr~~~~~-~~~~~~~~Yl~~~~-----~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~l  408 (522)
T TIGR03799       335 LYVPMGAGMVLFKDPALM-SAIEHHAEYILRKG-----SKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEK  408 (522)
T ss_pred             CCcCcccEEEEEeCHHHH-HHhccCcchhcCCC-----CCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence            999999999999998654 66777889985432     235678899999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCC-------------cchhHHHHHHHHHHHHhcCCEEEEeeeEC--
Q 010842          396 AKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSG-------------SADTEMLNRKLLDWVNSTGRVYLTHTIVG--  460 (499)
Q Consensus       396 a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~-------------~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--  460 (499)
                      +++|.+.|++.|+|+++.+|.+++||||+.|.....             .+..+.+|+++.++++++|.++++.+.++  
T Consensus       409 a~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~  488 (522)
T TIGR03799       409 AKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPA  488 (522)
T ss_pred             HHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeccc
Confidence            999999999999999999999999999997743110             13357889999999999999999988775  


Q ss_pred             -----CEEEEEEeccCCCCcHHHHHHHHHH
Q 010842          461 -----GLYMLRFAVGASLTDERHVVAAWEL  485 (499)
Q Consensus       461 -----g~~~lRi~~~~~~~t~~di~~l~~~  485 (499)
                           +..+||++++||.||++||+.+++.
T Consensus       489 ~~~g~~~~~lR~~~~np~tt~~~i~~~l~~  518 (522)
T TIGR03799       489 QYDHQPTVVFRVVLANPLTTHEILQDILDE  518 (522)
T ss_pred             ccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence                 3478999999999999999998864

This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).

>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=100.00  E-value=9.7e-75  Score=577.75  Aligned_cols=370  Identities=41%  Similarity=0.751  Sum_probs=333.3

Q ss_pred             hhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHH
Q 010842           51 PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTEL  130 (499)
Q Consensus        51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~l  130 (499)
                      |++|++.++.++|++|.+++++++++.+.+.++..+|+||+|+||+++++++++++++++++.+|+|...|+.+|..+++
T Consensus         1 P~~l~~~~~~~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~   80 (373)
T PF00282_consen    1 PGELRARLDEELPEEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLASALNQNGFTWEASPAATEI   80 (373)
T ss_dssp             TTSSGGGCHCCHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHHHHH
T ss_pred             ChhhhhcCccccccCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHhhhcccccccccccccccc
Confidence            77899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc---cCCeEEEcCCCCchhHHHHHHH
Q 010842          131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN---MHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g---~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      |+++++|+++++|+|.++...+.++|++|+|||+||++|+++||++..++.+.+|   .++++||+|+.+|||+.|+|++
T Consensus        81 E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~  160 (373)
T PF00282_consen   81 EREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARI  160 (373)
T ss_dssp             HHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHH
T ss_pred             hHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcce
Confidence            9999999999999996643333468999999999999999999999888766666   4689999999999999999999


Q ss_pred             hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842          208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG  287 (499)
Q Consensus       208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~  287 (499)
                      +|+   .++.||++++  ++||+++|+++|+++.++|..|++|++|+|||.+|++|||++|+++|+++++|+||||||||
T Consensus       161 lGl---g~~~I~~~~~--~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg  235 (373)
T PF00282_consen  161 LGL---GVRKIPTDED--GRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGG  235 (373)
T ss_dssp             TTS---EEEEE-BBTT--SSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGG
T ss_pred             eee---EEEEecCCcc--hhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccc
Confidence            999   5999999975  59999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842          288 SACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR  367 (499)
Q Consensus       288 ~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~  367 (499)
                      +++++|+++++..++++||||++|+|||+++|++||++++|++..+...++..+.|+.....+.+...++.++++++||+
T Consensus       236 ~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~  315 (373)
T PF00282_consen  236 SALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRR  315 (373)
T ss_dssp             GGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGH
T ss_pred             cccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhccccccccccccccccccccccc
Confidence            88889999999999999999999999999999999999999999888888889999997654555667888999999999


Q ss_pred             CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEec
Q 010842          368 FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLN  425 (499)
Q Consensus       368 ~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~  425 (499)
                      ++++++|++|+.+|.+|+++++++.++++++|++.|++.|+++++.+|.+++||||++
T Consensus       316 ~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~k  373 (373)
T PF00282_consen  316 FRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRYK  373 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEES
T ss_pred             chHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEeC
Confidence            9999999999999999999999999999999999999999999999999999999984

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....

>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type

Probab=100.00  E-value=1.3e-70  Score=569.32  Aligned_cols=468  Identities=18%  Similarity=0.240  Sum_probs=391.3

Q ss_pred             cCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCc
Q 010842           11 SVQFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSP   90 (499)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p   90 (499)
                      -..|+.+|.+.|++++.++++.+.+++++..... .+..+|++++.   .++.+...+++++++++.+.+.+++++|+||
T Consensus         8 flgpk~en~~~~~~~~~~~~~~~~~~r~~~~p~d-~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~l~~~sv~~~~P   83 (608)
T TIGR03811         8 FIGDKAENGQLYKDLLNKLVDEHLGWRQNYMPQD-KPVISPQERTS---KSFTKTVNNMKDVLDELSSRLRTESVPWHSA   83 (608)
T ss_pred             eecCcccCHHHHHHHHHHHHHHHHHHHHhcCCCC-CCCCCHHHhcc---cccccCccCHHHHHHHHHHHHhcCCCCCCCc
Confidence            3578999999999999999999999999853110 13566776665   3455566689999999999999999999999


Q ss_pred             -cccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHH
Q 010842           91 -NFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVT  169 (499)
Q Consensus        91 -~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~a  169 (499)
                       ||+||+++++++|+++++++...+|+|+..|+.||+++.+|+++++|+++++|++..       +|+||+|||+||++|
T Consensus        84 ~ry~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~-------~G~~TsGGT~ANl~a  156 (608)
T TIGR03811        84 GRYWGHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNG-------WGHIVADGSLANLEG  156 (608)
T ss_pred             cceEEECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCC-------CeEEeCChHHHHHHH
Confidence             999999999999999999999999999999999999999999999999999999874       689999999999999


Q ss_pred             HHHHHHHHHh-----Hhh-----------------------------------hh----c--cCC-eEEEcCCCCchhHH
Q 010842          170 LIAARDRALD-----AVG-----------------------------------AE----N--MHK-LVVYGSDQTHSTFA  202 (499)
Q Consensus       170 l~~ar~~~~~-----~~~-----------------------------------~~----g--~~~-~~i~~s~~~H~s~~  202 (499)
                      |++||+.+..     ..+                                   ..    |  ..+ .++++|..+|||+.
T Consensus       157 L~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~  236 (608)
T TIGR03811       157 LWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWL  236 (608)
T ss_pred             HHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHH
Confidence            9999996511     100                                   00    0  112 27999999999999


Q ss_pred             HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHH---HHhCC--
Q 010842          203 KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVA---NEYGI--  277 (499)
Q Consensus       203 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia---~~~~~--  277 (499)
                      |++.++|+|.++++.||+|++  ++||+++|+++|+++.++|.+|++||+|+|||.+|+||||++|+++|   +++|+  
T Consensus       237 KAa~ilGlG~~~vv~VpvD~~--~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~  314 (608)
T TIGR03811       237 KAADIIGIGLDQVIPVPVDSN--YRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYF  314 (608)
T ss_pred             HHHHHcCCCcccEEEeecCCC--CcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCce
Confidence            999999999999999999864  59999999999999999999999999999999999999999999999   67898  


Q ss_pred             EEEeeccccchh--ccC------------------------------ccchhhhcCCCCCceeEecccccccCCCcceEE
Q 010842          278 WVHVDAAYAGSA--CIC------------------------------PEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCL  325 (499)
Q Consensus       278 ~lhvD~A~g~~~--~~~------------------------------~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l  325 (499)
                      |+||||||||++  +++                              +++++.+.++++||||++|+|||+++|++||++
T Consensus       315 ~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~l  394 (608)
T TIGR03811       315 YLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGI  394 (608)
T ss_pred             eEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEE
Confidence            699999999975  222                              355677889999999999999999999999999


Q ss_pred             EEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC-CCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHH
Q 010842          326 WVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR-FKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGF  402 (499)
Q Consensus       326 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~  402 (499)
                      ++|++. +.+.++..++|+.....+  .......++++++|+ ++++++|++++.+  |.+|+++++++++++|+++.+.
T Consensus       395 l~Rd~~-~~~~~~~~a~Yl~~~~~~--~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~  471 (608)
T TIGR03811       395 VIQDIR-MRDVISYFATYVFEKGAD--IPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDF  471 (608)
T ss_pred             EEeCHH-HHHHHhcCcchhcccccc--CcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence            999996 567888999999764321  112456778888886 4699999999998  9999999999999999999999


Q ss_pred             Hhc------CCCeEE--EcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcC-----CEEEEeeeEC--------
Q 010842          403 VKS------DPRFEI--VVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STG-----RVYLTHTIVG--------  460 (499)
Q Consensus       403 L~~------~~~~~~--~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g-----~~~~~~~~~~--------  460 (499)
                      |++      .|.+++  +.+|++++|||++.+.+..+-+..|++|+++.+++. ..|     .++++.|.+.        
T Consensus       472 L~~~~~~~~~~~~el~~~~~pdlniV~Fr~~~~g~~~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg~~~  551 (608)
T TIGR03811       472 LNNLEFKVGDKEIEVHPLTKPDFNMVDYVFNEKGNDDLVKMNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYGDSP  551 (608)
T ss_pred             HHhcccccCCCCeeEEecCCCCcceEEEEEecCCCccHHHHHHHHHHHHHhhccccCCCCCcceEeeecccccchhhhhH
Confidence            988      467777  778999999999987652122567899999999876 222     2344444331        


Q ss_pred             ------------------CEEEEEEeccCCCCcH-HHHHHHHHHHHHHHHHHh
Q 010842          461 ------------------GLYMLRFAVGASLTDE-RHVVAAWELIMEGADRLF  494 (499)
Q Consensus       461 ------------------g~~~lRi~~~~~~~t~-~di~~l~~~l~~~~~~l~  494 (499)
                                        ...+||.++|+|..++ +.++.+++.|+++..+-+
T Consensus       552 ~~~~~~~~~~~~~~~~~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~~~~  604 (608)
T TIGR03811       552 FAFVNSLGFSDEEWQRAGKVTILRASVMTPYMNDKENFDEYAPKIKAAMQEKL  604 (608)
T ss_pred             HHHHHHcCCChhhhccCCceEEEEEEecCcccCChhhHHHHHHHHHHHHHHHH
Confidence                              2378999999998876 568888888888776544

This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.

>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]

Probab=100.00  E-value=2.2e-72  Score=530.63  Aligned_cols=465  Identities=22%  Similarity=0.363  Sum_probs=422.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcC--CCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccC
Q 010842           19 AQEFRKQAHQMVDFIADYYQNIE--SYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFF   96 (499)
Q Consensus        19 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~   96 (499)
                      .+..+.++.++++.+.+|...--  +..|.....|.+|+..+..++|+++.+.++|+.+.++.+.. ++...||||++.+
T Consensus        30 ~~~te~fl~~v~~~ll~~v~~~~dr~~kv~~fhhP~~L~~l~nlel~~~~esl~qil~~cr~tl~y-~vKTgHprffNQl  108 (510)
T KOG0629|consen   30 EEVTEPFLRAVVDILLDYVKKGFDRSQKVLDFHHPDELKELFNLELRDQPESLAQILEDCRDTLKY-SVKTGHPRFFNQL  108 (510)
T ss_pred             chhhHhhhHHHHHHHHHhhccCCcccceeecccChHHHHHHhCcccCCChhhHHHHHHHHHHHHHh-hhccCCCcchhhh
Confidence            34457888999999999955443  34788889999999999999999999999999999987755 4566899999999


Q ss_pred             CCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHH
Q 010842           97 PATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDR  176 (499)
Q Consensus        97 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~  176 (499)
                      .++..+.+..++++++..|.|.+.|+..|+...+|.++...+.++.|++..      ++|+|++||+-+|++|+.+||.+
T Consensus       109 ~~glD~~~Lag~wlT~t~Ntn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~------~DgIf~pggsisn~Ya~~~Aryk  182 (510)
T KOG0629|consen  109 SSGLDPIGLAGEWLTSTANTNMFTYEIAPVFVLMEEEVLAKMREIVGWEEG------GDGIFAPGGSISNMYAMNCARYK  182 (510)
T ss_pred             ccCCCHHHHHHHHHHhccCCCCceEEecceEEeehHHHHHHHHHHhCCCCC------CCceecCCchhHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999999999875      47899999999999999999999


Q ss_pred             HHhHhhhhc---cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEe
Q 010842          177 ALDAVGAEN---MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCAT  253 (499)
Q Consensus       177 ~~~~~~~~g---~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t  253 (499)
                      ..++.+..|   +|+.++++|+.+|||+.|+++.+|+|+++++.|++++.|  .|++++||+.|.++.++|..||+|.+|
T Consensus       183 ~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e~G--km~~~dLe~kile~k~kg~~Pf~vnaT  260 (510)
T KOG0629|consen  183 NFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDERG--KMIPDDLEKKILEAKAKGGVPFFVNAT  260 (510)
T ss_pred             cCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEEecccccC--ccchHHHHHHHHHHHhcCCCCeEEEec
Confidence            888766554   589999999999999999999999999999999999876  999999999999999999999999999


Q ss_pred             cCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhH
Q 010842          254 VGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLL  333 (499)
Q Consensus       254 ~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l  333 (499)
                      +|||..|++|||+.|+++|++|++|+||||||||+.+++..+|+++.|+++|||++++|||++++|..|+.+++|....+
T Consensus       261 aGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll  340 (510)
T KOG0629|consen  261 AGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLL  340 (510)
T ss_pred             CCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          334 VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       334 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                      .+..+..+.||+++...+...+|.++..+||||+.+.+++|..|++-|..|+++.++++.++|+||.++|++.++++++.
T Consensus       341 ~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~  420 (510)
T KOG0629|consen  341 QRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLF  420 (510)
T ss_pred             HhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehh
Confidence            88889999999999888888889999999999999999999999999999999999999999999999999999988775


Q ss_pred             C--CCceEEEEEecCCCCCC-------cchhHHHHHHHHHHHHhcCCEEEEeeeECCE-EEEEEeccCCCCcHHHHHHHH
Q 010842          414 P--RHFALVCFRLNPYPHSG-------SADTEMLNRKLLDWVNSTGRVYLTHTIVGGL-YMLRFAVGASLTDERHVVAAW  483 (499)
Q Consensus       414 ~--~~~~~v~f~~~~~~~~~-------~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~-~~lRi~~~~~~~t~~di~~l~  483 (499)
                      .  |+...|||++.|.....       ......+.-.+.+++.++|..++++.+...+ .++|+.+.|+..+.+|+|.++
T Consensus       421 ~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dfll  500 (510)
T KOG0629|consen  421 ELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLL  500 (510)
T ss_pred             cCCCceEEEeeccCchHhccCcccchhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhhhHHHHH
Confidence            3  78888999998764211       1223344557788999999988888776554 689999999999999999999


Q ss_pred             HHHHHHHHH
Q 010842          484 ELIMEGADR  492 (499)
Q Consensus       484 ~~l~~~~~~  492 (499)
                      +.|..+.+.
T Consensus       501 dEIerlgq~  509 (510)
T KOG0629|consen  501 DEIERLGQD  509 (510)
T ss_pred             HHHHHhccC
Confidence            999887654

>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]

Probab=100.00  E-value=1.1e-59  Score=476.49  Aligned_cols=438  Identities=25%  Similarity=0.314  Sum_probs=358.0

Q ss_pred             HHHHHHhcCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcC-CCCCCCCccccccCCCCCChHHHHHHHHH
Q 010842           33 IADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIP-GITHWLSPNFFAFFPATVSTAGFLGEMLC  111 (499)
Q Consensus        33 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~l~  111 (499)
                      +.++....+.++..+...|.+-.......+|+.+.+.++++.++...... ....+.||+++.|..+++.++..+.+.+.
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~   83 (460)
T COG0076           4 LIDKDMLNSKRYSGDSLSPLFGALSDSRMAPEKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLV   83 (460)
T ss_pred             HHHHHHhhccCCCccccccchhhhhhhccCCccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHH
Confidence            44444444444444455555555555678899999999999999988444 44445699999999999999999999999


Q ss_pred             HHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh-c--cCC
Q 010842          112 ACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE-N--MHK  188 (499)
Q Consensus       112 ~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~-g--~~~  188 (499)
                      ..+|+|...|..+|+++++|+++++|+++++|++..      +.|+||+|||+||++|++++|++..+..+.. +  ...
T Consensus        84 ~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~------~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~  157 (460)
T COG0076          84 SALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEE------ASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGK  157 (460)
T ss_pred             HHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCC------CceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCC
Confidence            999999999999999999999999999999999865      3689999999999999999999987544322 1  124


Q ss_pred             eEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHH
Q 010842          189 LVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPL  268 (499)
Q Consensus       189 ~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I  268 (499)
                      ++|++|..+|+|+.|+++++|+   .++.||+++. +++||+++|+++|++++..|    +||+++|||++|.+|||++|
T Consensus       158 P~ii~s~~aH~s~~Kaa~~lG~---~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~iDdi~~i  229 (460)
T COG0076         158 PNIVCSETAHFSFEKAARYLGL---GLRRVPTVPT-DYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSIDDIEEL  229 (460)
T ss_pred             CeEEecCcchhHHHHHHHHhCC---CceeEEeccC-ccccCHHHHHHHHHhhccCc----eEEEEecCCCCCccCCHHHH
Confidence            5899999999999999999999   6777777653 47999999999999998765    69999999999999999999


Q ss_pred             HHHHHHhCCEEEeeccccchhccCccchhh-hcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCC
Q 010842          269 AEVANEYGIWVHVDAAYAGSACICPEFRHY-LNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNK  347 (499)
Q Consensus       269 ~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~-~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~  347 (499)
                      ++||+++++|+||||||||+.+.+.+.+.. ..+++++|||++|+|||+++|++||++++||++.+.+.+.....|+...
T Consensus       230 a~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~  309 (460)
T COG0076         230 ADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGG  309 (460)
T ss_pred             HHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCC
Confidence            999999999999999999999877777666 6899999999999999999999999999999987878888888887753


Q ss_pred             CCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecC
Q 010842          348 PSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP  426 (499)
Q Consensus       348 ~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~  426 (499)
                              ...++++.++|.. .++++|+.++.+|.+||+++++++.++++++++.|++.+.|+++++|.+++|||++++
T Consensus       310 --------~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~  381 (460)
T COG0076         310 --------GIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKD  381 (460)
T ss_pred             --------CcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCC
Confidence                    2345577788877 6899999999999999999999999999999999999988999999999999999955


Q ss_pred             CCC--C-CcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          427 YPH--S-GSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       427 ~~~--~-~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ...  . .....+..+..+..+...+|..++..+.+.++..+++.+.++.++.++ +.+...+.....++
T Consensus       382 ~~~~~~~~~~~~~~~gw~v~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  450 (460)
T COG0076         382 DEDTLADLSERLDRRGWQVPAQLLPKGLAIVFGTHVTGRQGLKFIVANLLITDRE-ESLLALIEEPGREI  450 (460)
T ss_pred             cccchhchHHHHHhcCceeecccCCccceeeeeeEEeeeeeehhhcchhhhhhhh-HHHHHHhhhhhhhh
Confidence            320  0 001112223334444555565566666777788888888877777777 66666666544443

>PLN02263 serine decarboxylase

Probab=100.00  E-value=4.8e-58  Score=459.55  Aligned_cols=360  Identities=18%  Similarity=0.253  Sum_probs=307.3

Q ss_pred             HHHHHHHHHhhhcCCCCCCCCccccccCCCCCCh-HHHHHHHHHHHcccCCcccccCh---hhHHHHHHHHHHHHHHcCC
Q 010842           69 FETILKDVQEKIIPGITHWLSPNFFAFFPATVST-AGFLGEMLCACFNSVGFNWLASP---ASTELEIVVMDWLATMLKL  144 (499)
Q Consensus        69 ~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~~p---~~~~lE~~~~~~la~l~g~  144 (499)
                      ++++++++.+.+.++..+     |+|| |.+.++ ++.+++++...+|+-+..|..+|   .+.++|+++++|+++++|+
T Consensus        75 ~~~~l~~~~~~~~~~~~~-----~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~  148 (470)
T PLN02263         75 MASVLARYRKTLVERTKH-----HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEI  148 (470)
T ss_pred             HHHHHHHHHHHHHhcccc-----eeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhCC
Confidence            588999999999887654     9999 888888 89999999999998888999998   7999999999999999999


Q ss_pred             CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCC
Q 010842          145 PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDA  224 (499)
Q Consensus       145 ~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~  224 (499)
                      +++.     .+|++|+||||||++||++||+..         ++.++|+|+.+|+|+.|+++++|+   +++.||++++ 
T Consensus       149 p~~~-----~~G~vtsGGTEaNL~Al~aARe~~---------~~~vvy~S~~aH~Sv~KAa~llgi---~~~~Vp~d~~-  210 (470)
T PLN02263        149 EKNE-----YWGYITNCGTEGNLHGILVGREVF---------PDGILYASRESHYSVFKAARMYRM---ECVKVDTLVS-  210 (470)
T ss_pred             CCCC-----CeEEEeCcHHHHHHHHHHHHHhhc---------CCcEEEEcCCccHHHHHHHHhcCC---cceEeccCCC-
Confidence            8631     268999999999999999999864         456899999999999999999999   9999999864 


Q ss_pred             CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC-----EEEeeccccchhccCccchhhh
Q 010842          225 NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI-----WVHVDAAYAGSACICPEFRHYL  299 (499)
Q Consensus       225 ~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~-----~lhvD~A~g~~~~~~~~~~~~~  299 (499)
                       ++||+++|+++|.+++   .+|++|++|+|||++|++|||++|+++|+++|+     |+||||||||+++++.+..+.+
T Consensus       211 -g~mD~~aL~~aI~~d~---~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~  286 (470)
T PLN02263        211 -GEIDCADFKAKLLANK---DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKV  286 (470)
T ss_pred             -CcCcHHHHHHHHHhCC---CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccccc
Confidence             5999999999997754   479999999999999999999999999999997     9999999999877443333445


Q ss_pred             cCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC-cHHHHHHHH
Q 010842          300 NGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK-SLRLWMVLR  378 (499)
Q Consensus       300 ~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~  378 (499)
                      .+.+.+|||++|+|||+++|++||++++|++.  ...+...+.|+....           .++.+||++. ++++|++|+
T Consensus       287 df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~--~~~~~~~~~Yl~~~d-----------~ti~gSR~g~~al~lW~~L~  353 (470)
T PLN02263        287 TFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH--INVLSSNVEYLASRD-----------ATIMGSRNGHAPIFLWYTLN  353 (470)
T ss_pred             CCCcCccEEEECCccccCCCcCEEEEEEehhh--HhhhccChHhhCCCC-----------CCcCCCCCcHHHHHHHHHHH
Confidence            56667999999999999999999999999753  367788899997642           3688999984 899999999


Q ss_pred             HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee
Q 010842          379 SYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI  458 (499)
Q Consensus       379 ~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~  458 (499)
                      .+|.+|++++++++.++|+++.+.|++. +++++.+|..++|+|+....             .    ...+|+. ++.  
T Consensus       354 ~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f~~p~~-------------~----~~~~gW~-L~~--  412 (470)
T PLN02263        354 RKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVFERPKD-------------E----EFVRRWQ-LAC--  412 (470)
T ss_pred             HhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEEecCch-------------H----HhhcceE-Ecc--
Confidence            9999999999999999999999999998 78777788899999975321             0    1224642 222  


Q ss_pred             ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          459 VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       459 ~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .  ...++++++ +..+++.||++++.|++..+..
T Consensus       413 ~--~~~~Hivvm-phv~~~~id~fi~DL~~~~~~~  444 (470)
T PLN02263        413 Q--GNIAHVVVM-PSVTIEKLDYFLKELVEKRSTW  444 (470)
T ss_pred             C--CCcEEEEEc-CCCCHHHHHHHHHHHHHHHhhh
Confidence            1  135999997 8889999999999999887654

>TIGR01788 Glu-decarb-GAD glutamate decarboxylase

Probab=100.00  E-value=3.5e-57  Score=457.75  Aligned_cols=398  Identities=18%  Similarity=0.225  Sum_probs=333.4

Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHH
Q 010842           60 DSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLA  139 (499)
Q Consensus        60 ~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la  139 (499)
                      .++|++|.+.+++++++.+.+..  .+..||+|++|+.+++.+.  +.+++..++|+|...|..+|..+++|+++++|++
T Consensus        15 ~~~p~~~~~~~~~~~~~~~~iyl--d~~a~~~~~~~~tt~~~p~--~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la   90 (431)
T TIGR01788        15 YRMPEEEMPPDAAYQLIHDELSL--DGNPRLNLATFVTTWMEPE--ARKLMDETINKNMIDKDEYPQTAEIENRCVNMLA   90 (431)
T ss_pred             ccCCCCCCCHHHHHHHHHHHhhh--cCCcceeeeeeeCCCCCHH--HHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHH
Confidence            58999999999999999987643  3456899999998766554  5888888898887788888988899999999999


Q ss_pred             HHcCCC-C--ccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc--cCCeEEEcCCCCchhHHHHHHHhCCCCCC
Q 010842          140 TMLKLP-K--TFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN--MHKLVVYGSDQTHSTFAKVCKLAGVSPAN  214 (499)
Q Consensus       140 ~l~g~~-~--~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g--~~~~~i~~s~~~H~s~~ka~~~~G~g~~~  214 (499)
                      +++|++ .  +      .+|++|+||||||++|+.++|++...+.+.+|  ..+.+||+|+.+|+|+.|+++.+|+   +
T Consensus        91 ~llg~~~~~~~------~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~---~  161 (431)
T TIGR01788        91 DLWHAPAKDAE------AVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDV---E  161 (431)
T ss_pred             HHhCCCCCCCC------CeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCc---e
Confidence            999998 2  3      25788999999999999999865433211222  2356899999999999999999999   9


Q ss_pred             eEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh------CCEEEeeccccch
Q 010842          215 IRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY------GIWVHVDAAYAGS  288 (499)
Q Consensus       215 v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~------~~~lhvD~A~g~~  288 (499)
                      ++.||++++ ++++|+++|+++|+++      +++|+++++||.+|++||+++|+++|+++      |+|+||||||||+
T Consensus       162 v~~i~~d~~-~~~vd~~~L~~~i~~~------t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~  234 (431)
T TIGR01788       162 LREVPMDPG-RYVIDPEQVVEAVDEN------TIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGF  234 (431)
T ss_pred             eEEEecCCC-ceeeCHHHHHHHHhhC------CeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHH
Confidence            999999873 3689999999999875      45899999999999999999999999999      9999999999988


Q ss_pred             hcc--CccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCC
Q 010842          289 ACI--CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR  366 (499)
Q Consensus       289 ~~~--~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr  366 (499)
                      .+.  .++.+..+. ++++||+++|+|||+++|+|||++++|++..+...+...+.|+....         .+++++++|
T Consensus       235 ~~p~~~~~~~~~~~-~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~---------~~~t~~~sR  304 (431)
T TIGR01788       235 IAPFVYPDLEWDFR-LPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDE---------PTFTLNFSR  304 (431)
T ss_pred             HHHHhCCCchhhcC-CCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCC---------CCcceecCc
Confidence            753  344443333 67899999999999999999999999998656566777788886421         235788999


Q ss_pred             CC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcchhHHHHHHHHH
Q 010842          367 RF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSADTEMLNRKLLD  444 (499)
Q Consensus       367 ~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~  444 (499)
                      ++ +++++|+.++.+|.+|++++++++++++++|.+.|++.|+|+++.+ +.+++|||++.+..   +  .+..+.++.+
T Consensus       305 ~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~---~--~~~~~~~l~~  379 (431)
T TIGR01788       305 PANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDA---D--PGYTLYDLSH  379 (431)
T ss_pred             hHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCC---C--CCcCHHHHHH
Confidence            97 7899999999999999999999999999999999999999999987 79999999997632   0  1122677889


Q ss_pred             HHHhcCCEE---EEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          445 WVNSTGRVY---LTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       445 ~l~~~g~~~---~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +|.++|+++   .+++.+++..++|++++ +.++++.++.+++.|+++...+
T Consensus       380 ~L~~~G~~~~~~~~p~~~~~~~~lR~~~~-~~~~~~~~~~~~~~~~~~~~~~  430 (431)
T TIGR01788       380 RLRERGWIVPAYTLPKNAEDIVVMRIVVR-EGFSRDLAELLIEDIEAALAYL  430 (431)
T ss_pred             HHHHCCCcccCCCCCCccCCeEEEEEEec-CCCCHHHHHHHHHHHHHHHHhh
Confidence            999999864   45566889999999995 8899999999999999988765

This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).

>PLN03032 serine decarboxylase; Provisional

Probab=100.00  E-value=4.1e-50  Score=397.90  Aligned_cols=356  Identities=21%  Similarity=0.278  Sum_probs=284.6

Q ss_pred             HHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccc---cChhhHHHHHHHHHHHHHHcCCC
Q 010842           69 FETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWL---ASPASTELEIVVMDWLATMLKLP  145 (499)
Q Consensus        69 ~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~---~~p~~~~lE~~~~~~la~l~g~~  145 (499)
                      ..++++.+.+.+..     .+..|+||......-++.+..++....|..+..+.   .+..+.++|+++++|+++++|++
T Consensus         8 ~~~~~~~~~~~~~~-----~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~   82 (374)
T PLN03032          8 MADILASYDKLLAE-----KSSVHFGYPYNLDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELE   82 (374)
T ss_pred             HHHHHHHHHHHHHH-----hhhhccCCCchhccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCC
Confidence            45677777666543     46679999876655556677776655443333333   33478999999999999999997


Q ss_pred             CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCC
Q 010842          146 KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDAN  225 (499)
Q Consensus       146 ~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~  225 (499)
                      ++.     .+|+||+||||||++|++++|+..         ++.+|++|..+|+|+.|+++++|+   .++.||+++++ 
T Consensus        83 ~~~-----~~G~fTsGGTEaNl~al~~ar~~~---------~~~~vi~s~~~H~Sv~kaa~~lg~---~~~~V~~d~~g-  144 (374)
T PLN03032         83 KDE-----YWGYITTCGTEGNLHGILVGREVF---------PDGILYASRESHYSVFKAARMYRM---EAVKVPTLPSG-  144 (374)
T ss_pred             Ccc-----CCEEEeCchHHHHHHHHHHHHHhC---------CCcEEEeCCCceeHHHHHHHHcCC---CCeEeeeCCCC-
Confidence            542     258999999999999999998752         345799999999999999999999   78999998765 


Q ss_pred             CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC-----CEEEeeccccchhccCccchhhhc
Q 010842          226 FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG-----IWVHVDAAYAGSACICPEFRHYLN  300 (499)
Q Consensus       226 ~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~-----~~lhvD~A~g~~~~~~~~~~~~~~  300 (499)
                       +||+++|+++|++++   ..|++|++++|||++|++||+++|+++|+++|     +|+|||||+|++.+......+.+.
T Consensus       145 -~id~~~L~~~i~~~~---~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~  220 (374)
T PLN03032        145 -EIDYDDLERALAKNR---DKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVT  220 (374)
T ss_pred             -cCcHHHHHHHHHHcC---CCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccC
Confidence             999999999998653   36889999999999999999999999999996     599999999998765422222233


Q ss_pred             CCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC-CCcHHHHHHHHH
Q 010842          301 GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR-FKSLRLWMVLRS  379 (499)
Q Consensus       301 g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~  379 (499)
                      ....+||+++|+|||+++|+|||++++|++.  .+.+...++|+...           ++++++||+ ++++++|++|+.
T Consensus       221 ~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~--~~~~~~~~~Yl~~~-----------d~ti~gSR~g~~~l~~w~~l~~  287 (374)
T PLN03032        221 FRKPIGSVSVSGHKFLGCPMPCGVALTRKKH--VKALSQNVEYLNSR-----------DATIMGSRNGHAPLYLWYTLRR  287 (374)
T ss_pred             CCcCCcEEEECcccccCCCcCeEEEEEEchh--hHhhccCCcccCCC-----------CCcccCCCchHHHHHHHHHHHH
Confidence            3346999999999999999999999999853  25677788998653           358899997 478999999999


Q ss_pred             hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE
Q 010842          380 YGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV  459 (499)
Q Consensus       380 ~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~  459 (499)
                      +|.+|++++++++.++++++.+.|++. +++++..|..++|+|+.+..            ..+.     +|+. ++.  .
T Consensus       288 ~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~V~f~~~~~------------~~~~-----~~w~-l~~--~  346 (374)
T PLN03032        288 KGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSSTVVFERPMD------------EAFI-----KKWQ-LAC--E  346 (374)
T ss_pred             hCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceEEEEcCCCc------------HhHh-----heee-ecc--c
Confidence            999999999999999999999999986 88888888899999976532            1111     2432 222  1


Q ss_pred             CCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          460 GGLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       460 ~g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      .  ..+|+++| +.++++.||++++.|++
T Consensus       347 ~--~~~hi~vm-~~~~~~~id~fi~dl~~  372 (374)
T PLN03032        347 G--DIAHVVVM-PNVTVEKLDEFVEELVE  372 (374)
T ss_pred             C--CEEEEEEC-CCCCHHHHHHHHHHHhc
Confidence            1  37999998 88999999999999876

>PRK02769 histidine decarboxylase; Provisional

Probab=100.00  E-value=1.4e-48  Score=390.25  Aligned_cols=356  Identities=19%  Similarity=0.270  Sum_probs=286.9

Q ss_pred             HHHHHHHHhhhcCCCCCCCCccccccCCCCCCh-HHHHHHHHHHHcccCCcccccCh----hhHHHHHHHHHHHHHHcCC
Q 010842           70 ETILKDVQEKIIPGITHWLSPNFFAFFPATVST-AGFLGEMLCACFNSVGFNWLASP----ASTELEIVVMDWLATMLKL  144 (499)
Q Consensus        70 ~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~~p----~~~~lE~~~~~~la~l~g~  144 (499)
                      .+.++.+...+      .+||+|+.++|..... ++.+.+++....|+.+ .+...+    .+.++|+++++|+++++|+
T Consensus         8 ~~~~~~~~~~~------~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~n~g-np~~~~~~g~~~~~~e~~~~~~~a~l~g~   80 (380)
T PRK02769          8 QKEIEDFWLYL------RHNQYFNVGYPEAADFDYSALKRFFSFSINNCG-DPYSKSNYPLNSFDFERDVMNFFAELFKI   80 (380)
T ss_pred             HHHHHHHHHHH------HHhhhcccCCCchhhcCHHHHHHHHHhhhccCC-CccccCCCCCChHHHHHHHHHHHHHHhCC
Confidence            45566665544      2588888887777766 6888898888776533 333334    4789999999999999999


Q ss_pred             CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCC
Q 010842          145 PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDA  224 (499)
Q Consensus       145 ~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~  224 (499)
                      ++..     .+|+||+||||||++|++++|+..         ++.+|++|+.+|+|+.|+++.+|+   ..+.||++++ 
T Consensus        81 ~~~~-----~~G~~TsGgTean~~a~~~ar~~~---------~~~~ii~s~~~H~Sv~ka~~~lg~---~~~~V~~~~~-  142 (380)
T PRK02769         81 PFNE-----SWGYITNGGTEGNLYGCYLARELF---------PDGTLYYSKDTHYSVSKIARLLRI---KSRVITSLPN-  142 (380)
T ss_pred             CCCC-----CCEEEecChHHHHHHHHHHHHHhC---------CCcEEEeCCCceehHHHHHHHcCC---CCceeccCCC-
Confidence            7542     258999999999999999998753         456899999999999999999999   7888998764 


Q ss_pred             CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC---CEEEeeccccchhccCccchhhhcC
Q 010842          225 NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG---IWVHVDAAYAGSACICPEFRHYLNG  301 (499)
Q Consensus       225 ~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~---~~lhvD~A~g~~~~~~~~~~~~~~g  301 (499)
                       ++||+++|+++|+++   +.+|++|++++|||.+|++||+++|+++|++||   +|+|||||||++.+.+.+....+..
T Consensus       143 -g~id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~  218 (380)
T PRK02769        143 -GEIDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSF  218 (380)
T ss_pred             -CcCcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCc
Confidence             599999999999875   567889999999999999999999999999998   6999999999987654433333443


Q ss_pred             CCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHh
Q 010842          302 IERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSY  380 (499)
Q Consensus       302 ~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~  380 (499)
                      .+++||+++|+|||+++|+|||++++|++. + ..+...+.|+...           +.++.+||+. +++++|++|+.+
T Consensus       219 ~~~vDsis~s~HK~~~~P~g~G~l~~r~~~-~-~~~~~~~~yl~~~-----------d~t~~GSR~g~~~l~lw~aL~~l  285 (380)
T PRK02769        219 ADGIDSIAISGHKFIGSPMPCGIVLAKKKY-V-ERISVDVDYIGSR-----------DQTISGSRNGHTALLLWAAIRSL  285 (380)
T ss_pred             cCCCCEEEECCcccCCCCCCcEEEEEehhh-h-hhcccCccccCCC-----------CCCccCCCCcHHHHHHHHHHHHH
Confidence            347999999999999999999999999753 3 3344556776532           3467899974 689999999999


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC
Q 010842          381 GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG  460 (499)
Q Consensus       381 g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~  460 (499)
                      |.+|++++++++.++++++.+.|++. +++++.+|.+++|+|+.+..             .+.     +|+. +...  .
T Consensus       286 g~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~~v~f~~~~~-------------~~~-----~~w~-l~~~--~  343 (380)
T PRK02769        286 GSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSITVVFPCPSE-------------RIW-----KKWH-LATS--G  343 (380)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCceEEEEcCCCH-------------HHH-----hCee-Eccc--C
Confidence            99999999999999999999999885 89999999999999975431             121     3432 2322  1


Q ss_pred             CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          461 GLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       461 g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                        .++|+++| +.+|++.||.+++.|.+....
T Consensus       344 --~~~hi~~~-~~~~~~~~~~f~~dl~~~~~~  372 (380)
T PRK02769        344 --NQAHIITM-PHHNKQQIDSLIDELIFDLKN  372 (380)
T ss_pred             --CEEEEEEC-CCCCHHHHHHHHHHHHHHHhc
Confidence              37999998 999999999999999887653

>cd06450 DOPA_deC_like DOPA decarboxylase family

Probab=100.00  E-value=2.4e-44  Score=360.51  Aligned_cols=340  Identities=39%  Similarity=0.638  Sum_probs=290.0

Q ss_pred             ccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHHH
Q 010842           92 FFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVTL  170 (499)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~al  170 (499)
                      |++++++++.+++.++++++..+|++...|..+|...++|+++++|+++++|++ ..      ..+++|+|||+||++++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~------~~~~~t~ggt~a~~~al   74 (345)
T cd06450           1 FLAGFVTTMDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSED------ADGVFTSGGSESNLLAL   74 (345)
T ss_pred             CcccccCCCcHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCC------CCEEEeCChhHHHHHHH
Confidence            788999999999999999999999998889999999999999999999999997 32      25799999999999999


Q ss_pred             HHHHHHHHhHhhhhc---cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCcc
Q 010842          171 IAARDRALDAVGAEN---MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVP  247 (499)
Q Consensus       171 ~~ar~~~~~~~~~~g---~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p  247 (499)
                      .+++.+..++.+..+   .++.+|+++..+|+++.+++..+|.   +++.||+++++  .+|+++|++++.++.+++.++
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~---~~~~v~~~~~~--~~d~~~l~~~i~~~~~~~~~~  149 (345)
T cd06450          75 LAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDV---KVRLVPVDEDG--RMDPEALEAAIDEDKAEGLNP  149 (345)
T ss_pred             HHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhc---CeEEeeeCCCC--CcCHHHHHHHHHHHHHCCCCc
Confidence            999875433221111   1356899999999999999999999   99999998654  999999999999877777778


Q ss_pred             EEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEE
Q 010842          248 LFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWV  327 (499)
Q Consensus       248 ~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~  327 (499)
                      .+|++++++|++|.++|+++|+++|+++|+|+|+|+||+.+....+.......+++.+|++++++|||+++|+++|++++
T Consensus       150 ~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~  229 (345)
T cd06450         150 IMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLV  229 (345)
T ss_pred             EEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHH
Confidence            88999999999999999999999999999999999999988765544443334556799999999999999999999865


Q ss_pred             eCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 010842          328 KQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP  407 (499)
Q Consensus       328 r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~  407 (499)
                      +                                         ++++|++++.++.+++++++++..++++++.+.|++++
T Consensus       230 ~-----------------------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~  268 (345)
T cd06450         230 R-----------------------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADP  268 (345)
T ss_pred             H-----------------------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            4                                         57889999999999999999999999999999999999


Q ss_pred             CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          408 RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       408 ~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                      +++++.++..++++|++.+..     +.+..+.++.++|.++|.+++.+..+.+..++|++++++.+|++||++++++|+
T Consensus       269 ~~~~~~~~~~~iv~f~~~~~~-----~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~  343 (345)
T cd06450         269 GFELLGEPNLSLVCFRLKPSV-----KLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIE  343 (345)
T ss_pred             CeEEecCCceeEEEEEECCcc-----hhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHH
Confidence            999888788899999986520     012335678888988887777766666778899999766679999999999987


Q ss_pred             H
Q 010842          488 E  488 (499)
Q Consensus       488 ~  488 (499)
                      +
T Consensus       344 ~  344 (345)
T cd06450         344 R  344 (345)
T ss_pred             h
Confidence            5

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.

>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]

Probab=100.00  E-value=3.9e-36  Score=289.22  Aligned_cols=393  Identities=16%  Similarity=0.179  Sum_probs=306.5

Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHccc-CCcccccChhhHHHHHHHHHHH
Q 010842           60 DSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNS-VGFNWLASPASTELEIVVMDWL  138 (499)
Q Consensus        60 ~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~l  138 (499)
                      ..+|+.|.+-+++++.+.+...-+.. |.-.+-.+-++..   ......++...+|. |...-+..|+...+|+++++++
T Consensus        54 ~~lP~~gl~~d~v~~~i~~~~~ld~~-~~~~~vS~~v~~~---~~~~~~l~~~~~~k~N~l~~d~fp~~~~~e~~~Vnm~  129 (491)
T KOG1383|consen   54 FTLPSKGLPKDAVLELINDELMLDGN-PRLGLASGVVYWG---EPELDKLIMEAYNKFNPLHPDEFPVVRKLEAECVNMI  129 (491)
T ss_pred             ecCCCCCCCHHHHHHHHHHHhccCCC-cccCeeeEEEecC---CcchhhHHHHHHhhcCccCccccchhHHHHHHHHHHH
Confidence            57899999999999999887755544 3333333333222   11223344444444 5566678899999999999999


Q ss_pred             HHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEe
Q 010842          139 ATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRAL  218 (499)
Q Consensus       139 a~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v  218 (499)
                      +.||+.+++      ..|..|+|||+|.+++....+++....   .|+.++.|+++...|.+++|+++++++   .++.|
T Consensus       130 ~~L~~~~~~------~~g~~t~G~Ses~l~~~k~~~~~r~~~---k~I~~p~iv~~~~v~~a~eK~a~yf~v---~l~~V  197 (491)
T KOG1383|consen  130 ANLFNAPSD------SCGCGTVGGSESGLAAKKSYRNRRKAQ---KGIDKPNIVTPQNVHAAFEKAARYFEV---ELREV  197 (491)
T ss_pred             HHHhcCCcc------ccCccccccchHHHHHHHHHHHHHHhc---cCCCCccccchHHHHHHHHHHHhhEEE---EEEee
Confidence            999999865      368999999999888888877765442   367788999999999999999999999   99999


Q ss_pred             eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH-hCCEEEeeccccchhccCccch-
Q 010842          219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE-YGIWVHVDAAYAGSACICPEFR-  296 (499)
Q Consensus       219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~-~~~~lhvD~A~g~~~~~~~~~~-  296 (499)
                      |+++ ++|++|+..+.+.+++++.      +||+..|++++|.+||+++|+++.-+ +++++|||+|-||+......+. 
T Consensus       198 ~~~~-~~~~~D~~k~~~~i~eNti------~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~  270 (491)
T KOG1383|consen  198 PLDE-GDYRVDPGKVVRMIDENTI------MLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNE  270 (491)
T ss_pred             eccc-cceEecHHHHHHHhccceE------EEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCc
Confidence            9997 4799999999999999875      89999999999999999999999988 9999999999999876411111 


Q ss_pred             -hhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC-cHHHH
Q 010842          297 -HYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK-SLRLW  374 (499)
Q Consensus       297 -~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~  374 (499)
                       ..-.+..++-|++.|+||++++|.|.|+++.|++..+..-+-..+.|+.+.         +...|+.+||+.. ....|
T Consensus       271 ~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~---------y~s~TlngSR~g~~va~~w  341 (491)
T KOG1383|consen  271 EEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGI---------YASPTLNGSRPGSQVAAQW  341 (491)
T ss_pred             cccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCcc---------ccCcccccCCcccHHHHHH
Confidence             122345679999999999999999999999999987766666677777653         3456889999876 46889


Q ss_pred             HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEE
Q 010842          375 MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYL  454 (499)
Q Consensus       375 ~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~  454 (499)
                      ++|..+|.+||.+..+++.+.++.|++.|++++++.++.+|...++.|.-....          --++.+.|.+.|+.+-
T Consensus       342 a~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~~----------i~elsd~l~~~GW~ln  411 (491)
T KOG1383|consen  342 AALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDVN----------IFELSDLLRKKGWILN  411 (491)
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCccc----------hhhhhHHHHhcCcCcc
Confidence            999999999999999999999999999999999999999987766665433211          2456677778898654


Q ss_pred             EeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhccC
Q 010842          455 THTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGS  497 (499)
Q Consensus       455 ~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~~  497 (499)
                      ..+...   .+-+|++--.+.++-.++++..|+++.+++...+
T Consensus       412 alq~P~---a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~p  451 (491)
T KOG1383|consen  412 ALQFPA---AIHICVTRVHAREDVADRFVADIRKVVEELKSLP  451 (491)
T ss_pred             ccCCCC---ceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhCC
Confidence            433222   3444443222334447899999999999886654

>PRK13520 L-tyrosine decarboxylase; Provisional

Probab=100.00  E-value=3.3e-35  Score=297.35  Aligned_cols=367  Identities=20%  Similarity=0.234  Sum_probs=271.7

Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCC
Q 010842           67 ESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPK  146 (499)
Q Consensus        67 ~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~  146 (499)
                      .+.+++++.+.+...++... .  ||++...+.+. |.++ +.+...+..+.......+....+++++.+++++++|.+.
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~-~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~   76 (371)
T PRK13520          2 LSEEEILEELEEYRSEDLKY-E--RILSSMCTEPH-PIAR-KAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPD   76 (371)
T ss_pred             CCHHHHHHHHHHHHhcCCCH-H--HeeeeeecCch-HHHH-HHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCC
Confidence            46789999999887776543 3  58887654433 3333 444444433322222235677888999999999999976


Q ss_pred             ccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCC
Q 010842          147 TFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANF  226 (499)
Q Consensus       147 ~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~  226 (499)
                      .       .+++++|||+||..++.++++...       .++..|+++...|+++.++++..|+   +++.||++.+  +
T Consensus        77 ~-------~~~~~~ggt~a~~~a~~~~~~~~~-------~~~~~vl~~~~~h~s~~~~~~~~g~---~~~~v~~~~~--~  137 (371)
T PRK13520         77 A-------YGYITSGGTEANIQAVRAARNLAK-------AEKPNIVVPESAHFSFDKAADMLGV---ELRRAPLDDD--Y  137 (371)
T ss_pred             C-------CeEEecCcHHHHHHHHHHHHhhcc-------CCCceEEecCcchHHHHHHHHHcCc---eEEEecCCCC--C
Confidence            4       368999999999999888865311       1356789999999999999999999   9999998754  4


Q ss_pred             ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCcc-chhhhcCCCCC
Q 010842          227 SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPE-FRHYLNGIERV  305 (499)
Q Consensus       227 ~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~-~~~~~~g~~~a  305 (499)
                      .+|+++|+++|++++      .+|++++++|++|.++|+++|+++|+++|+++|||+||+++...... ..........+
T Consensus       138 ~~d~~~l~~~i~~~~------~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~v  211 (371)
T PRK13520        138 RVDVKAVEDLIDDNT------IGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGV  211 (371)
T ss_pred             cCCHHHHHHHHhhCC------EEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCC
Confidence            899999999997643      36778889999999999999999999999999999999876532111 10011123458


Q ss_pred             ceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHHH
Q 010842          306 DSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVLN  384 (499)
Q Consensus       306 Dsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g  384 (499)
                      |++++++|||+..|.++|+++++++..+ +.+....+|+....          .+...+++.. ....+|.++..++.+|
T Consensus       212 d~~~~s~~K~~~a~~~~G~~~~~~~~~~-~~l~~~~~~~~~~~----------~~~~~gt~~~~~~~~~~~al~~l~~~g  280 (371)
T PRK13520        212 DSITIDPHKMGLAPIPAGGILFRDESYL-DALAVDTPYLTSKK----------QATLTGTRSGAGVAATYAVMKYLGREG  280 (371)
T ss_pred             ceEEECCccccCccCCceEEEEcCHHHH-HhhcccCccccCCC----------CcceEeeccChHHHHHHHHHhhhcHhH
Confidence            9999999999998999999998876544 33333344543321          1122344443 3568899999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEE
Q 010842          385 LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYM  464 (499)
Q Consensus       385 ~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~  464 (499)
                      ++++.++..++++++.+.|++. +++++.++..++++|.+.+            .+++.++|.++|+.+ ...  .+..+
T Consensus       281 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~------------~~~v~~~L~~~gi~v-~~~--~~~~~  344 (371)
T PRK13520        281 YRKVVERCMENTRWLAEELKER-GFEPVIEPVLNIVAFDDPN------------PDEVREKLRERGWRV-SVT--RCPEA  344 (371)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCceEEEEecCC------------HHHHHHHHHHCCcee-ccC--CCCCE
Confidence            9999999999999999999988 8885556677888887642            356777777778543 322  23457


Q ss_pred             EEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          465 LRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       465 lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      +|++++ +.+|++||+++++.|+++.+
T Consensus       345 iRis~~-~~~t~edi~~~~~~l~~~~~  370 (371)
T PRK13520        345 LRIVCM-PHVTREHIENFLEDLKEVKK  370 (371)
T ss_pred             EEEEEE-CCCCHHHHHHHHHHHHHHhh
Confidence            999985 78999999999999988654

>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA

Probab=100.00  E-value=4.5e-34  Score=289.23  Aligned_cols=367  Identities=19%  Similarity=0.252  Sum_probs=266.8

Q ss_pred             CHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCc
Q 010842           68 SFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKT  147 (499)
Q Consensus        68 ~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~  147 (499)
                      +.+++++++.++ ..+.++.++++++..+...+.++. . +.+..++..+.......|....+++++.+++++++|.++.
T Consensus         1 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~   77 (373)
T TIGR03812         1 SEEEVLEELKEY-RSEDLKYSDGRILGSMCTNPHPIA-V-KAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDA   77 (373)
T ss_pred             CHHHHHHHHHHH-HhcCCCCCCCcEEEEEeCCchHHH-H-HHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCC
Confidence            457899999984 456667788998888766555442 2 2233333222111122356678889999999999999764


Q ss_pred             cccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCc
Q 010842          148 FMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFS  227 (499)
Q Consensus       148 ~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~  227 (499)
                             .+++++|||++++.++.+++.....     +.++..|+++..+|+++.++++..|+   +++.+|++++  +.
T Consensus        78 -------~~~~~~g~~~~~~~~~~~~~~~~~~-----~~~g~~vl~~~~~h~~~~~~~~~~G~---~~~~v~~~~~--~~  140 (373)
T TIGR03812        78 -------YGYIVSGGTEANIQAVRAAKNLARE-----EKRTPNIIVPESAHFSFEKAAEMLGL---ELRYAPLDED--YT  140 (373)
T ss_pred             -------CeEEeccHHHHHHHHHHHHHHHHhc-----cCCCcEEEECCcchHHHHHHHHHcCC---eEEEEeeCCC--CC
Confidence                   3688999999999888776542211     11346788999999999999999999   9999998753  58


Q ss_pred             cCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccc----hhhhcCCC
Q 010842          228 LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEF----RHYLNGIE  303 (499)
Q Consensus       228 ~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~----~~~~~g~~  303 (499)
                      +|+++|++++++++      ..++.+.++|++|.++|+++|+++|+++|+|+|||+||+++.......    ........
T Consensus       141 ~d~~~l~~~l~~~~------~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~  214 (373)
T TIGR03812       141 VDVKDVEDLIDDNT------IGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLP  214 (373)
T ss_pred             cCHHHHHHHHhhCc------EEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCC
Confidence            99999999997643      245666689999999999999999999999999999998765321110    01111123


Q ss_pred             CCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcH
Q 010842          304 RVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGV  382 (499)
Q Consensus       304 ~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~  382 (499)
                      .+|++++++|||+..|.++|.+++++++.+ +.+....+|+....          .+...+++.. ....++.+++.++.
T Consensus       215 ~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~-~~l~~~~~~~~~~~----------~~~~~gt~~~~~~~~~~~~l~~l~~  283 (373)
T TIGR03812       215 GVQSITIDPHKMGLSPIPAGGILFRSKSYL-KYLSVDAPYLTVKK----------QATITGTRSGASAAATYAVIKYLGR  283 (373)
T ss_pred             CCCEEEECccccCCCcCCceEEEEeCHHHH-hhhcccCcccCCCC----------CcceEeechhHHHHHHHHHHHHhCH
Confidence            589999999999998999998887776544 33333344543321          1122345443 35688899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCE
Q 010842          383 LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGL  462 (499)
Q Consensus       383 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~  462 (499)
                      ++++++.++..++++++++.|+++ +++.+.++..++++|+..+            ...+.++|.++|+. +...  .+.
T Consensus       284 ~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~------------~~~v~~~L~~~gi~-v~~~--~~~  347 (373)
T TIGR03812       284 EGYRKIVAECMENTRYLVEELKKI-GFEPVIEPVLNIVAFEVDD------------PEEVRKKLRDRGWY-VSVT--RCP  347 (373)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCCceEEEEEeCC------------HHHHHHHHHHCCce-eccC--CCC
Confidence            999999999999999999999998 5655546777888887643            23677778778854 3332  234


Q ss_pred             EEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          463 YMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       463 ~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      .++|++++ +.+|++|+++++++|++
T Consensus       348 ~~iRis~~-~~~t~edid~l~~~L~~  372 (373)
T TIGR03812       348 KALRIVVM-PHVTREHIEEFLEDLKE  372 (373)
T ss_pred             CEEEEEEE-CCCCHHHHHHHHHHHhh
Confidence            57999996 77999999999999975

Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.

>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]

Probab=100.00  E-value=9.8e-34  Score=273.54  Aligned_cols=343  Identities=18%  Similarity=0.144  Sum_probs=256.7

Q ss_pred             ccccccCCCCCChHHHHHHHHH---HH-cccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHH
Q 010842           90 PNFFAFFPATVSTAGFLGEMLC---AC-FNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDS  165 (499)
Q Consensus        90 p~~~~~~~~~~~~~~~~~~~l~---~~-~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A  165 (499)
                      +-|+.|-...+..|.++..++.   .. .|++. .+..+..+..+-++.++.+++++|.++.       ..+||+||||+
T Consensus         2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS-~H~~G~~A~~~ve~AR~~iA~llga~~~-------eIiFTSG~TEs   73 (386)
T COG1104           2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSS-LHSFGREARKAVEEAREQIAKLLGADPE-------EIIFTSGATES   73 (386)
T ss_pred             cccccccccCCCCHHHHHHHHHHHHhhcCCccc-hhHhHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEecCCcHH
Confidence            3477777777777766655543   33 35554 5556766777777789999999999875       47999999999


Q ss_pred             HHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh---CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH
Q 010842          166 ILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA---GVSPANIRALPTSVDANFSLSPQLLRRAVEADVE  242 (499)
Q Consensus       166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~---G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~  242 (499)
                      |.+|+..+.......     ..+-.|++|...|.++.+.++.+   |+   +|.++|++.+|  .+|+++|+++|++++.
T Consensus        74 nNlaI~g~~~a~~~~-----~~~~HIIts~iEH~aVl~~~~~Le~~g~---~Vtyl~V~~~G--~v~~e~L~~al~~~T~  143 (386)
T COG1104          74 NNLAIKGAALAYRNA-----QKGKHIITSAIEHPAVLNTCRYLERQGF---EVTYLPVDSNG--LVDLEQLEEALRPDTI  143 (386)
T ss_pred             HHHHHHhhHHhhhcc-----cCCCeEEEcccccHHHHHHHHHHHhcCC---eEEEeCCCCCC--eEcHHHHHHhcCCCce
Confidence            999998743322110     03457999999999999999999   89   99999999866  9999999999998864


Q ss_pred             cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842          243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC  322 (499)
Q Consensus       243 ~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~  322 (499)
                            +|.+.+.+|.+|+++||++|+++|+++|++||||++++.+-+..+-..     + .+|.+++++||+.+ |.|+
T Consensus       144 ------LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~-----~-~vD~ls~SaHK~~G-pkGi  210 (386)
T COG1104         144 ------LVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEE-----L-GVDLLSFSAHKFGG-PKGI  210 (386)
T ss_pred             ------EEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceeccccc-----c-CcceEEeehhhccC-CCce
Confidence                  899999999999999999999999999999999999988765543211     1 29999999999866 9999


Q ss_pred             eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcH------HHHHHHHHhcHHHHHHHHHHHHHHH
Q 010842          323 CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSL------RLWMVLRSYGVLNLQSHIRSDIRLA  396 (499)
Q Consensus       323 g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al------~~~~~l~~~g~~g~~~~~~~~~~~a  396 (499)
                      |++++|+.-.+       .+.+.+..+             +.++|.+..      .+-.+++ +..+.++....+...++
T Consensus       211 GaLyv~~~~~~-------~p~i~GGgQ-------------E~g~RsGTenv~~Ivg~~~A~~-~a~~~~~~~~~~~~~lr  269 (386)
T COG1104         211 GALYVRPGVRL-------EPLIHGGGQ-------------ERGLRSGTENVPGIVGFGKAAE-IAVEELEEENARLRKLR  269 (386)
T ss_pred             EEEEECCCCcc-------CceeccCcC-------------CCCCCCCCccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence            99999765332       234444332             345554322      2222222 23567778888899999


Q ss_pred             HHHHHHHhcC-CCeEEEcCC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE-------------
Q 010842          397 KMFEGFVKSD-PRFEIVVPR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV-------------  459 (499)
Q Consensus       397 ~~l~~~L~~~-~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-------------  459 (499)
                      ++|.+.|.+. |++.+...+   -.++++|.+....          .+.+.-.|...|+.+-+++..             
T Consensus       270 ~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~----------gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~A  339 (386)
T COG1104         270 DRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVE----------GESLLLALDLAGIAVSTGSACSSGSLEPSHVLRA  339 (386)
T ss_pred             HHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCc----------HHHHHHhccccCeEEeccccccCCCCCccHHHHH
Confidence            9999999975 888877543   3467778877654          456666677667654332211             


Q ss_pred             ------CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          460 ------GGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       460 ------~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                            ..+..+|+|++ ..+|++||+++++++.++.+++.+
T Consensus       340 mG~~~e~a~~siR~S~g-~~tt~eei~~~~~~l~~~i~~lr~  380 (386)
T COG1104         340 MGISEELAHGSIRFSLG-RFTTEEEIDAAAEALKEIIKRLRE  380 (386)
T ss_pred             cCCChHHhCccEEEEcC-CCCCHHHHHHHHHHHHHHHHHHhh
Confidence                  12378999995 999999999999999999998754

>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=3.7e-33  Score=280.18  Aligned_cols=353  Identities=17%  Similarity=0.177  Sum_probs=264.0

Q ss_pred             cccccCCCCCChHHHHHHHHHHHc---ccCC--cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHH
Q 010842           91 NFFAFFPATVSTAGFLGEMLCACF---NSVG--FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDS  165 (499)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~~---n~~~--~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A  165 (499)
                      .|+.+-.++. .|..+.+.+..++   +.|.  ..+..+..+++.+.++++.+++++|.++.      ...+||.|+|+|
T Consensus        24 vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~------~eIvft~~tT~a   96 (405)
T COG0520          24 VYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSS------DEIVFTRGTTEA   96 (405)
T ss_pred             EEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCC------CeEEEeCChhHH
Confidence            4555544433 5667777776654   2332  34555667788899999999999999852      147999999998


Q ss_pred             HHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh----HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH
Q 010842          166 ILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST----FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV  241 (499)
Q Consensus       166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s----~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~  241 (499)
                      +.......... ..       ++++|+++...|+|    |...++..|+   .++++|+++++  .++.+++++.++++|
T Consensus        97 ln~va~~l~~~-~~-------~gdeIv~s~~EH~sn~~pw~~~~~~~Ga---~v~~i~~~~~g--~~~~~~~~~~i~~~T  163 (405)
T COG0520          97 LNLVARGLGRS-LK-------PGDEIVVSDLEHHSNIVPWQELAKRTGA---KVRVIPLDDDG--LLDLDALEKLITPKT  163 (405)
T ss_pred             HHHHHHHhhhh-hc-------CCCEEEEccCcchhhHHHHHHHHHhcCc---EEEEEecCCCC--CcCHHHHHHhcCCCc
Confidence            76655544221 11       46889999999987    6677777899   99999998554  999999999888877


Q ss_pred             HcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc
Q 010842          242 EAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD  321 (499)
Q Consensus       242 ~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~  321 (499)
                      +      +|++++.+|.+|.+.|+++|+++||++|+|++||+|++.+....+-     +. -++|.+.+++|||+++|.|
T Consensus       164 k------lvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv-----~~-l~~Df~afsgHKwl~gP~G  231 (405)
T COG0520         164 K------LVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDV-----QE-LGCDFLAFSGHKWLLGPTG  231 (405)
T ss_pred             e------EEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCc-----hh-cCCCEEEEcccccccCCCc
Confidence            6      8999999999999999999999999999999999999887665432     11 1499999999999999999


Q ss_pred             ceEEEEeCchhHHHhhcCCccCCCCCCC-C-----CCCcccCCCcccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHH
Q 010842          322 CCCLWVKQPGLLVKALSTDPEYLKNKPS-E-----SNSVVDFKDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDI  393 (499)
Q Consensus       322 ~g~l~~r~~~~l~~~~~~~~~yl~~~~~-~-----~~~~~~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~  393 (499)
                      +|++++|++..  .   ...++..+... +     ....++...+.++.+.+.  .++.+-.+++.+...|++++.++..
T Consensus       232 iGvLy~r~~~l--~---~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~  306 (405)
T COG0520         232 IGVLYVRKELL--E---ELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHER  306 (405)
T ss_pred             eEEEEEchHHH--h---hcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHH
Confidence            99999998542  1   11233322211 0     011122233344444443  3466778888888889999999999


Q ss_pred             HHHHHHHHHHhcCCCeEEEcCC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE--------CCE
Q 010842          394 RLAKMFEGFVKSDPRFEIVVPR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV--------GGL  462 (499)
Q Consensus       394 ~~a~~l~~~L~~~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--------~g~  462 (499)
                      ++++++.+.|+++|+++++.++   +..+++|.+....          ...+...|.++|++.-.+...        +-.
T Consensus       307 ~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~----------~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~  376 (405)
T COG0520         307 ELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIH----------PHDVATLLDEKGIAVRAGHHCAQPLHRLLGVD  376 (405)
T ss_pred             HHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCC----------HHHHHHHHHhCCeEEEeccccccHHHHhcCCC
Confidence            9999999999999999999865   6899999998754          577888888889443333221        112


Q ss_pred             EEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          463 YMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       463 ~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      ..+|+|+ ++++|++|||+++++|+++.+
T Consensus       377 ~~iR~S~-~~YNt~edid~l~~aL~~~~~  404 (405)
T COG0520         377 ATIRASL-HLYNTEEDVDRLLEALKKALA  404 (405)
T ss_pred             CceEEEE-eecCCHHHHHHHHHHHHHHhh
Confidence            3499999 499999999999999998764

>PRK04366 glycine dehydrogenase subunit 2; Validated

Probab=100.00  E-value=6.1e-32  Score=279.97  Aligned_cols=399  Identities=16%  Similarity=0.107  Sum_probs=269.2

Q ss_pred             hhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCC-CChHHHHHHHHHH-HcccCCccc---ccCh
Q 010842           51 PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPAT-VSTAGFLGEMLCA-CFNSVGFNW---LASP  125 (499)
Q Consensus        51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~l~~-~~n~~~~~~---~~~p  125 (499)
                      |+.++..-+..+|+  .++.++++++.++...+....  ..|.|.-.+. ..+|.+...++.. .+. +...|   ..+.
T Consensus        35 p~~~~~~~~~~~~~--~se~~~~~~~~~l~~~n~~~~--~~~~g~G~~~~~~~p~i~~~~~~~~~~~-~~tpYq~e~~sq  109 (481)
T PRK04366         35 PEELLRKEPPELPE--VSELEVVRHYTRLSQKNYGVD--TGFYPLGSCTMKYNPKINEKVARLPGFA-ELHPLQPEETVQ  109 (481)
T ss_pred             CHHHhcCCCCCCCC--CCHHHHHHHHHHHHhcCCCCC--cceecCcccCCCCCHHHHHHHHhCcchh-cCCCCCChhhhh
Confidence            55665444456776  899999999999887776432  2677766333 4444444444443 132 33455   3567


Q ss_pred             hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCCchhHHHH
Q 010842          126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~H~s~~ka  204 (499)
                      +..++..++.+|+++++|++..        .+..++|+.+.++++.+++.....+    |. ++..|+++...|.++...
T Consensus       110 G~lel~~~~~~~la~l~G~~~~--------~l~~~~GA~a~~~~l~~~r~~~~~~----Gd~~~~~Vlv~~~~hp~~~~~  177 (481)
T PRK04366        110 GALELMYELQEWLKEITGMDAV--------TLQPAAGAHGELTGLLMIRAYHEAR----GDTKRTEVIVPDSAHGTNPAS  177 (481)
T ss_pred             HHHHHHHHHHHHHHHHhCCCce--------EEEeCcHHHHHHHHHHHHHHHhhcc----CcCCCCEEEEcCCccHhHHHH
Confidence            7889999999999999999753        3666677777777666554322111    11 345788999999999999


Q ss_pred             HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-CChhHHHHHHHHhCCEEEeec
Q 010842          205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-DNVEPLAEVANEYGIWVHVDA  283 (499)
Q Consensus       205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d~l~~I~~ia~~~~~~lhvD~  283 (499)
                      ++..|+   +++.+|++.+  +.+|+++|++++.++++      +|++++++ ++|.+ +|+++|+++|+++|+|+|||+
T Consensus       178 ~~~~G~---~vv~v~~~~~--~~~D~e~L~~~i~~~t~------~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~  245 (481)
T PRK04366        178 AAMAGF---KVVEIPSNED--GLVDLEALKAAVGEDTA------ALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDG  245 (481)
T ss_pred             HHHcCC---EEEEeecCCC--CCcCHHHHHhhcccCCe------EEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEe
Confidence            999999   9999999753  59999999999976553      67778877 89998 689999999999999999999


Q ss_pred             cccchhccCccchhhhcCCCCCceeEecccccccCCCcc-----eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC-
Q 010842          284 AYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC-----CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF-  357 (499)
Q Consensus       284 A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~-----g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~-  357 (499)
                      |+..+.+..  ..   .+-.++|++++++||||++|.|+     |+++++++  +.+.+   ++.+...... .....+ 
T Consensus       246 a~~~~~~g~--~~---~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~--~~~~l---p~~~v~~~g~-~~~l~~~  314 (481)
T PRK04366        246 ANLNAILGK--AR---PGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE--LAPFL---PVPVVEKDGD-RYRLDYD  314 (481)
T ss_pred             cChhhhccc--CC---ccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh--hHhhC---CCCeeeccCC-ceeeccc
Confidence            986542211  11   12225999999999999988665     58888864  22222   2222111100 000011 


Q ss_pred             CCcccCCCCCCC-----cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CCCceEEEEEecCCCCCC
Q 010842          358 KDWQVGTGRRFK-----SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PRHFALVCFRLNPYPHSG  431 (499)
Q Consensus       358 ~~~~~~~sr~~~-----al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~~~v~f~~~~~~~~~  431 (499)
                      ...++...+.+.     ++++|..+..+|.+|++++.++..++++++++.|+++  +++.. .+.++.+.|...... ..
T Consensus       315 r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~-~~  391 (481)
T PRK04366        315 RPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGKKLK-ET  391 (481)
T ss_pred             ccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECcccc-cc
Confidence            111222222222     3788999999999999999999999999999999987  34332 233344444432100 00


Q ss_pred             cchhHHHHHHHHHHHHhcCCEEEEe-eeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhccC
Q 010842          432 SADTEMLNRKLLDWVNSTGRVYLTH-TIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGS  497 (499)
Q Consensus       432 ~~~~~~~~~~l~~~l~~~g~~~~~~-~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~~  497 (499)
                          +....++.++|.+.|+..... .+......+|++++ ..+|++|||+++++|+++.+++.+++
T Consensus       392 ----g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~-e~~t~edid~l~~~l~~i~~~~~~~~  453 (481)
T PRK04366        392 ----GVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPT-ETESKETLDAFIAAMKQIAEEAKENP  453 (481)
T ss_pred             ----CCCHHHHHHHHHHCCccCCccccccccCCeEEEccc-CCCCHHHHHHHHHHHHHHHHHHHhCc
Confidence                012567888888888643211 01112357999995 89999999999999999998876654

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=100.00  E-value=1.5e-31  Score=286.38  Aligned_cols=385  Identities=14%  Similarity=0.101  Sum_probs=272.6

Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccc-----cChhhHHHHHHHHHHHHHH
Q 010842           67 ESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWL-----ASPASTELEIVVMDWLATM  141 (499)
Q Consensus        67 ~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~-----~~p~~~~lE~~~~~~la~l  141 (499)
                      .++.++++++.++-.++..-. + .|++--.+....++ ..+++...++.....+.     .+.+..+++.++..||+++
T Consensus       466 ~sE~e~~r~~~~L~~kn~~~~-~-~fi~lGsctmk~na-~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~el  542 (939)
T TIGR00461       466 HSETEMLRYLHRLESKDLALN-N-SMIPLGSCTMKLNA-TAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSI  542 (939)
T ss_pred             CCHHHHHHHHHHHHhcCCCcc-c-cCCCCccCCCccCH-HHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHH
Confidence            388999999999877765432 2 45554333333343 44445333332222222     4556889999999999999


Q ss_pred             cCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC
Q 010842          142 LKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS  221 (499)
Q Consensus       142 ~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~  221 (499)
                      +|++..        ++..++|++|++++++++|.....+ +  ..++.+|++|..+|.+..++++..|+   +++.||++
T Consensus       543 tGmd~~--------Sl~p~aGA~gE~agL~aiR~y~~~r-g--e~~R~~vlip~saHgtnPasa~~~G~---~Vv~V~~d  608 (939)
T TIGR00461       543 TGFDAI--------SLQPNSGAQGEYAGLRVIRSYHESR-G--ENHRNICLIPVSAHGTNPASAAMAGM---QVVPVNCD  608 (939)
T ss_pred             HCCCCc--------ccCCchHHHHHHHHHHHHHHHHHhc-C--CCCCCEEEEEccccCcCHHHHHHCCC---EEEEeccC
Confidence            999853        4788888999999999988754211 0  11467899999999999999999999   99999998


Q ss_pred             CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC-hhHHHHHHHHhCCEEEeeccccchhccCccchhhhc
Q 010842          222 VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN-VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN  300 (499)
Q Consensus       222 ~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~-l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~  300 (499)
                      ++|  .+|+++|+++|++   .+..+.+|++++++| +|.++| +++|+++||++|.|++||||+.........     .
T Consensus       609 ~~G--~iDle~L~~~i~~---~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~-----P  677 (939)
T TIGR00461       609 QDG--NIDLVDLKNKAEQ---HGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTS-----P  677 (939)
T ss_pred             CCC--CcCHHHHHHHHhh---cCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCC-----c
Confidence            655  9999999999975   234567999999999 799977 999999999999999999999653332211     1


Q ss_pred             CCCCCceeEecccccccCCCcc-----eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCc----H
Q 010842          301 GIERVDSFSFSPHKWLLSYLDC-----CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKS----L  371 (499)
Q Consensus       301 g~~~aDsi~~~~hK~l~~p~~~-----g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a----l  371 (499)
                      +-.++|++++|.||+|+.|.|+     |++.+|+.  +...+..   .......+..+..  .+.+...++.++.    +
T Consensus       678 g~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~--L~~~lPg---~~v~~t~d~~gre--q~Iga~s~~~~g~a~~~l  750 (939)
T TIGR00461       678 GDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH--LIPFLPK---HDVVSMITGIGGS--KSIGSVSAAPYGSASILP  750 (939)
T ss_pred             cccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh--chhhcCC---CcccccccCCCCc--cccccccccccCcHHHHH
Confidence            3335999999999999976655     99999964  3222221   1111100000000  0112233444554    8


Q ss_pred             HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC----CCceEEEEEecCCCCCCcchhHHHHHHHHHHHH
Q 010842          372 RLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP----RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN  447 (499)
Q Consensus       372 ~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~  447 (499)
                      +.|+.++.+|.+|+++..+....+|+|+.++|++  +++++.+    +.++.++|++.+..    ++.+..+.++.++|.
T Consensus       751 ~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~~----~~~g~~~~dIakrL~  824 (939)
T TIGR00461       751 ISWMYIKMMGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPLK----AKTGIEAIDVAKRLQ  824 (939)
T ss_pred             HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccchh----hhcCCCHHHHHHHHH
Confidence            9999999999999999999999999999999987  4566654    45677888887531    112334678899999


Q ss_pred             hcCCEEEEee-eECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          448 STGRVYLTHT-IVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       448 ~~g~~~~~~~-~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      +.|....+.+ +..+...+|  ++ ..++++|||++++++.++.+++.+
T Consensus       825 d~G~hapt~~~pv~g~lmie--pT-E~eskeelD~f~~al~~I~~e~~~  870 (939)
T TIGR00461       825 DYGFHAPTLSFPVPGTLMVE--PT-ESESLEELDRFCDAMIAIKEEINA  870 (939)
T ss_pred             hCCeeccccCCccCCeEEEE--ee-ccCCHHHHHHHHHHHHHHHHHHHH
Confidence            9996543322 233443444  43 568999999999999999887754

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PRK05367 glycine dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-30  Score=284.89  Aligned_cols=382  Identities=14%  Similarity=0.079  Sum_probs=265.6

Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCC--ccc---ccChhhHHHHHHHHHHHHHH
Q 010842           67 ESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVG--FNW---LASPASTELEIVVMDWLATM  141 (499)
Q Consensus        67 ~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~--~~~---~~~p~~~~lE~~~~~~la~l  141 (499)
                      .++.++++.+.++-.++.....+..++|.. .....|.+....+  .++...  +.|   +.+.+..+++.++.+|++++
T Consensus       478 ~sE~e~~r~~~~l~~kn~~~~~~~i~lGsc-t~~~~p~~~~~~~--~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~el  554 (954)
T PRK05367        478 HSETEMMRYLRRLEDKDLALDRSMIPLGSC-TMKLNAAAEMIPI--TWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEI  554 (954)
T ss_pred             CCHHHHHHHHHHHHhcCcCcccceeeCCcC-CCcCCHHHHHHHH--hCccccccCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence            488999999999888877655566678872 2233333222222  222111  111   34556889999999999999


Q ss_pred             cCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeC
Q 010842          142 LKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPT  220 (499)
Q Consensus       142 ~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~  220 (499)
                      +|++..        .+..+||++|++.+|+++|......    |. ++.+|++|+.+|.|..+++.++|+   +++.||+
T Consensus       555 tG~d~~--------sl~~~~ga~ge~agL~a~r~~~~~~----G~~~r~~vlis~~aH~snp~sa~~~G~---~vv~v~~  619 (954)
T PRK05367        555 TGYDAV--------SLQPNAGAQGEYAGLLAIRAYHESR----GEGHRDVCLIPSSAHGTNPASAVMAGM---KVVVVAC  619 (954)
T ss_pred             HCCCCE--------EECccHHHHHHHHHHHHHHHHhhcc----CCCCCCEEEEEchhhhhhHHHHHHCCC---EEEEECC
Confidence            999853        2455677899999998877533221    21 356799999999999999999999   9999999


Q ss_pred             CCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhc
Q 010842          221 SVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN  300 (499)
Q Consensus       221 ~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~  300 (499)
                      +.++  .+|+++|+++++++   +..+++|++++++|..+..+|+++|+++||++|+|+|||||+.++.+....     .
T Consensus       620 d~~G--~iD~~~L~~~i~~~---~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~-----p  689 (954)
T PRK05367        620 DENG--NIDLDDLRAKAEEH---ADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLAR-----P  689 (954)
T ss_pred             CCCC--CcCHHHHHHHHhcc---CCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCC-----h
Confidence            8655  99999999999753   224778999999987444589999999999999999999999755433221     1


Q ss_pred             CCCCCceeEecccccccCCCcce-----EEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC----CcH
Q 010842          301 GIERVDSFSFSPHKWLLSYLDCC-----CLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF----KSL  371 (499)
Q Consensus       301 g~~~aDsi~~~~hK~l~~p~~~g-----~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~----~al  371 (499)
                      +..++|++++|+|||+++|.|+|     ++++|+.  +       .+|+.+.......  +-...+...+.++    .++
T Consensus       690 g~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~--l-------~p~lpg~~v~~~~--~~~~~g~v~ta~~g~al~~~  758 (954)
T PRK05367        690 GDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH--L-------APFLPGHPVQIAG--GETGIGAVSAAPFGSASILP  758 (954)
T ss_pred             hhcCCCEEEecCcccCCCCcCCCCCceEEEeeccc--c-------cccCCCCccCcCC--CCCCcCcchhHHHHHHHHHH
Confidence            22359999999999998887755     8998752  2       1233221100000  0000111222222    345


Q ss_pred             HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc--C--CCceEEEEEecCCCCCCcchhHHHHHHHHHHHH
Q 010842          372 RLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV--P--RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN  447 (499)
Q Consensus       372 ~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~--~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~  447 (499)
                      ..|+.++.+|.+|+++..++...+|+|++++|++.  +++..  +  +..+.++|.+.+...  +  .+..+.++.++|.
T Consensus       759 ~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~--~~~~~~~~~~~~~~e~i~~~~~~~~--~--~g~~~~di~krL~  832 (954)
T PRK05367        759 ISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH--YPVLYTGANGRVAHECILDLRPLKE--S--TGITVDDIAKRLI  832 (954)
T ss_pred             HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh--cCccccCCCCCcccceEEEeecccc--c--CCCCHHHHHHHHH
Confidence            78999999999999999999999999999999874  44332  2  345566776653210  0  0112467888888


Q ss_pred             hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          448 STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       448 ~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      +.|....+. .+.....+|++++ ..++++|||+++++++.+..++.+
T Consensus       833 d~G~~~~t~-~~pv~~~l~i~pt-E~~s~~elDr~~~al~~i~~e~~~  878 (954)
T PRK05367        833 DYGFHAPTM-SFPVAGTLMVEPT-ESESKAELDRFCDAMIAIRAEIDE  878 (954)
T ss_pred             HCCCeEeec-CCccCCEEEEEee-ecCCHHHHHHHHHHHHHHHHHHHH
Confidence            889654431 2323456999995 899999999999999999888754

>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase

Probab=99.97  E-value=3.5e-29  Score=252.33  Aligned_cols=374  Identities=16%  Similarity=0.153  Sum_probs=243.6

Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCCCCCCC--------Cccc---------cccCCCCCChHHHHHHHHHHHcccCCcccc
Q 010842           60 DSAPHRPESFETILKDVQEKIIPGITHWL--------SPNF---------FAFFPATVSTAGFLGEMLCACFNSVGFNWL  122 (499)
Q Consensus        60 ~~~p~~~~~~~~i~~~~~~~~~~~~~~~~--------~p~~---------~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~  122 (499)
                      ..+|++|.+.+.|...|.++-.-+..+|.        ..|-         +++..+-    +--+|++.     .+..-.
T Consensus        28 ~~~p~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~gere~rv~~~~~~~~~~~~~hgi----gr~~~l~~-----~q~ka~   98 (444)
T TIGR03531        28 RKIPEEGWDDETIELFLHELSVMDTNNFPNNVGVGEREGRVFSKLVARRHYRFCHGI----GRSGDLVA-----PQPKAA   98 (444)
T ss_pred             CcCCccCCCHHHHHHHHHHHhcCCcCCCccccCcCcccceeechhhhhcccceecCC----CCcccccc-----cCcccc
Confidence            47899999999998888887655555554        1121         1111110    00011100     011223


Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH-HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS-DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF  201 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt-~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~  201 (499)
                      .++....++.++..|+++++|.+...      .+++++||| +++.+++.+++.+.        .++..|+++..+|.|+
T Consensus        99 gss~~~~l~~~~e~~~~~~~G~~~~~------~a~~v~~~Tg~al~laL~alr~~~--------~~gd~VI~p~~th~S~  164 (444)
T TIGR03531        99 GSSLLYKLTNKLVKDFLKLLGLRSIK------SAFVVPLATGMSLSLCLSALRHKR--------PKAKYVIWPRIDQKSC  164 (444)
T ss_pred             CccHHHHHHHHHHHHHHHHcCCCCCC------EEEEECCHHHHHHHHHHHHcCCcC--------CCCCEEEEECcChHHH
Confidence            45667889999999999999998431      358999999 79999988876421        1234566777889999


Q ss_pred             HHHHHHhCCCCCCeEEeeCC-CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842          202 AKVCKLAGVSPANIRALPTS-VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH  280 (499)
Q Consensus       202 ~ka~~~~G~g~~~v~~v~~~-~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh  280 (499)
                      .|++.++|+   .++.||+. ++++|.+|+++|+++|++.+  ...+.+|+.+.+++..|..||+++|+++|++||+|+|
T Consensus       165 ~kAi~~~G~---~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~--~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lI  239 (444)
T TIGR03531       165 IKAISTAGF---EPRVIETVLDGDELTTDVEDIERAIEEIG--PDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHI  239 (444)
T ss_pred             HHHHHHcCC---eEEEeeeeecCcCCCcCHHHHHHHHHhcc--CCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEE
Confidence            999999999   99999952 23469999999999998532  1234455555555667789999999999999999999


Q ss_pred             eeccccchhccCccchhhh-cC--CCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842          281 VDAAYAGSACICPEFRHYL-NG--IERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF  357 (499)
Q Consensus       281 vD~A~g~~~~~~~~~~~~~-~g--~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  357 (499)
                      ||+|||...   +.+.+.. .+  .+++|++++|+||++.+|.++|++++++++... .+..  .|....          
T Consensus       240 vDaAyg~~~---~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~-~i~~--~y~g~~----------  303 (444)
T TIGR03531       240 VNNAYGLQS---NKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQ-EISK--SYPGRA----------  303 (444)
T ss_pred             EECcCcCcC---hhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHH-HHHH--hccCCC----------
Confidence            999998643   2223322 23  235899999999999999999999998887553 3322  121100          


Q ss_pred             CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEEcCCCceE-EEEEecCCCCCCcc
Q 010842          358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP---RFEIVVPRHFAL-VCFRLNPYPHSGSA  433 (499)
Q Consensus       358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~-v~f~~~~~~~~~~~  433 (499)
                              ....++.+|+++..+|.+++++++++..++++++.+.|+++.   |.+++..|...+ +++.+...   .+.
T Consensus       304 --------~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~---~~~  372 (444)
T TIGR03531       304 --------SASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTL---KGK  372 (444)
T ss_pred             --------CChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccc---ccc
Confidence                    112368899999999999999999999999999999998753   456664433222 23333211   011


Q ss_pred             hhHHHHHHHHHHHHhcCCEEEEee--eECCE--------------EEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          434 DTEMLNRKLLDWVNSTGRVYLTHT--IVGGL--------------YMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       434 ~~~~~~~~l~~~l~~~g~~~~~~~--~~~g~--------------~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      +...+...|..+-..--+++....  .+.|.              .++=++. ...++++|||.+++.|.++
T Consensus       373 ~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~-~~g~~~~~~~~~~~~l~~~  443 (444)
T TIGR03531       373 DPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAA-AIGMTKEDVDTFVSRLEKS  443 (444)
T ss_pred             CHHHHHHHHHhCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHH-HhCCcHHHHHHHHHHHhhc
Confidence            223333333332211111221111  12221              1233332 2457999999999999864

In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.

>PRK00451 glycine dehydrogenase subunit 1; Validated

Probab=99.97  E-value=6.5e-29  Score=257.11  Aligned_cols=380  Identities=14%  Similarity=0.099  Sum_probs=253.0

Q ss_pred             hhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHH------HHHcccCCcccccC
Q 010842           51 PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEML------CACFNSVGFNWLAS  124 (499)
Q Consensus        51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l------~~~~n~~~~~~~~~  124 (499)
                      |++++...+.++|+++ +.+++++++.++..++.....|+.++|.-..+...|..+.+.+      +. ++++...  .+
T Consensus        32 p~~~~~~~~~~lp~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~-y~~~~~~--~~  107 (447)
T PRK00451         32 PEELRLKRPLDLPPGL-SEMELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIPAVVDHIISRSEFYTA-YTPYQPE--IS  107 (447)
T ss_pred             CHHHHhCCCCCCCCCC-CHHHHHHHHHHHHhcCCCcCcCcccCcccccCCcCcHHHHHHHhchhHHHh-cCCCCCc--cc
Confidence            7788888888999875 9999999999987666655568889885444333444443332      22 4443332  34


Q ss_pred             hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842          125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka  204 (499)
                      ++..+...+..+|+++++|++.+       .+++|+|||+++..++. ++...         ++..|++++..|.++.++
T Consensus       108 ~g~~~~~~e~~~~la~l~g~~~~-------~v~~~~g~t~~~~~~~~-a~~~~---------~g~~Vlv~~~~~~~~~~~  170 (447)
T PRK00451        108 QGTLQAIFEYQTMICELTGMDVA-------NASMYDGATALAEAALM-AVRIT---------KRKKVLVSGAVHPEYREV  170 (447)
T ss_pred             hHHHHHHHHHHHHHHHHhCCCcc-------eEEecCcHHHHHHHHHH-HHHhc---------CCCEEEEeCccCHHHHHH
Confidence            55667777777899999999865       46899999976544443 33211         456788899999999988


Q ss_pred             HHH----hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842          205 CKL----AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH  280 (499)
Q Consensus       205 ~~~----~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh  280 (499)
                      ++.    .|+   +++.||+++  + ++|+++|+++|+++++      +|+++++ |++|.++|+++|+++|+++|+|++
T Consensus       171 ~~~~~~~~G~---~~~~v~~~~--~-~~d~~~l~~~i~~~t~------~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~i  237 (447)
T PRK00451        171 LKTYLKGQGI---EVVEVPYED--G-VTDLEALEAAVDDDTA------AVVVQYP-NFFGVIEDLEEIAEIAHAGGALFI  237 (447)
T ss_pred             HHHHHHhCCc---EEEEecCCC--C-CCCHHHHHHhcCCCeE------EEEEECC-CCCCeeCCHHHHHHHHHHCCCEEE
Confidence            775    577   999999875  3 8999999999976543      7777877 789999999999999999999999


Q ss_pred             e--eccccchhccCccchhhhcCCCCCceeEeccccc-----ccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842          281 V--DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKW-----LLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS  353 (499)
Q Consensus       281 v--D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~-----l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~  353 (499)
                      |  |....+ .+..+       +--++|.+++++|||     +++| ++|+++++++. . +.+.   +.+.+......+
T Consensus       238 v~~d~~~~g-~~~~~-------~~~~~D~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~~-~-~~~~---~~~~g~~~~~~~  303 (447)
T PRK00451        238 VGVDPVSLG-LLKPP-------GEYGADIVVGEGQPLGIPLSFGGP-YLGFFATRKKL-V-RQMP---GRLVGETVDADG  303 (447)
T ss_pred             EEcChHHhc-cCCCc-------ccCCCCEEEECCCcCCCCCCCCCC-CchHHHhhHHH-H-hhCC---CCEeeeecccCC
Confidence            8  544222 11111       112589999999997     4445 79998887632 2 2221   111100000000


Q ss_pred             cccC----------CCcccCCCCCC-----CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce
Q 010842          354 VVDF----------KDWQVGTGRRF-----KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA  418 (499)
Q Consensus       354 ~~~~----------~~~~~~~sr~~-----~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~  418 (499)
                      ...+          ..+..+.....     .++..+.+++.++.+|++++.++..++++++.+.|+++++++++..+.+.
T Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~  383 (447)
T PRK00451        304 KRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPFFN  383 (447)
T ss_pred             CeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCeEE
Confidence            0000          00000000000     11344555677889999999999999999999999999999887444444


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE-EEeeeE--CCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY-LTHTIV--GGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~~--~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      .+++++.. .          ..++.++|.++|++. +....+  .-..++|++++ ..+|++||++++++|+++.
T Consensus       384 ~~~v~~~~-~----------~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~-~~~t~e~i~~l~~~L~~~~  446 (447)
T PRK00451        384 EFVVRLPK-P----------AEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVT-EKRTKEDIDALVAALGEVL  446 (447)
T ss_pred             EEEEecCC-C----------HHHHHHHHHhcCCCCCcccccccCCcCCEEEEecC-CCCCHHHHHHHHHHHHHHh
Confidence            45555421 1          356777887777542 111111  11247999994 7899999999999998753

>TIGR03402 FeS_nifS cysteine desulfurase NifS

Probab=99.97  E-value=4.7e-28  Score=245.64  Aligned_cols=342  Identities=15%  Similarity=0.118  Sum_probs=233.0

Q ss_pred             ccccCCCCCChHHHHHHHHHHHccc---CC-cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH
Q 010842           92 FFAFFPATVSTAGFLGEMLCACFNS---VG-FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL  167 (499)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~~n~---~~-~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~  167 (499)
                      |+.+-..++.++.+ .+.+..++..   |. ..+..++......+++++++++++|.+.+       ..++|+|+|+++.
T Consensus         2 yld~aa~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~i~~t~~~t~a~~   73 (379)
T TIGR03402         2 YLDNNATTRVDPEV-LEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD-------EIIFTSGGTESDN   73 (379)
T ss_pred             cCCCcCCCCCCHHH-HHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCcHHHHHH
Confidence            55555555555544 4444433321   11 11222345566777889999999998754       4689999999999


Q ss_pred             HHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH---hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842          168 VTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL---AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG  244 (499)
Q Consensus       168 ~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~---~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g  244 (499)
                      .++....... +       ++.+|+++...|+++......   .|+   +++.||++.+  +.+|+++|++.+++++   
T Consensus        74 ~al~~~~~~~-~-------~~~~vv~~~~~~~s~~~~~~~~~~~G~---~v~~v~~~~~--g~~~~~~l~~~i~~~~---  137 (379)
T TIGR03402        74 TAIKSALAAQ-P-------EKRHIITTAVEHPAVLSLCQHLEKQGY---KVTYLPVDEE--GRLDLEELRAAITDDT---  137 (379)
T ss_pred             HHHHHHHHhc-C-------CCCeEEEcccccHHHHHHHHHHHHcCC---EEEEEccCCC--CcCCHHHHHHhcCCCc---
Confidence            8887764311 0       345788899999987655443   488   9999998754  4899999999986543   


Q ss_pred             CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceE
Q 010842          245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCC  324 (499)
Q Consensus       245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~  324 (499)
                         .+|++++++|++|.+.|+++|+++|+++|+++|+|++++.+....+-     .. ..+|++++++|| +++|.|+|+
T Consensus       138 ---~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~-----~~-~~~D~~~~s~~K-~~gp~G~g~  207 (379)
T TIGR03402       138 ---ALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDL-----KE-MNIDMLSLSGHK-LHGPKGVGA  207 (379)
T ss_pred             ---EEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCc-----cc-CCCCEEEEcHHH-cCCCCceEE
Confidence               47888999999999999999999999999999999999865433221     11 248999999999 667999999


Q ss_pred             EEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC-C-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010842          325 LWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR-F-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGF  402 (499)
Q Consensus       325 l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~  402 (499)
                      +++++...      ..+ ++.+...         ....+.+.. . ..+.+..+++.+ .+++++..++..++++++.+.
T Consensus       208 l~v~~~~~------~~p-~~~g~~~---------~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~  270 (379)
T TIGR03402       208 LYIRKGTR------FRP-LLRGGHQ---------ERGRRAGTENVPGIVGLGKAAELA-TEHLEEENTRVRALRDRLEAG  270 (379)
T ss_pred             EEECCCCC------CCC-cccCCcc---------CCCcCCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHH
Confidence            99986431      112 2211110         000111111 1 122334444443 456788888999999999999


Q ss_pred             Hhc-CCCeEEEcCCC---ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC------------------
Q 010842          403 VKS-DPRFEIVVPRH---FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG------------------  460 (499)
Q Consensus       403 L~~-~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~------------------  460 (499)
                      |++ +|++++..++.   .+++.|.+....          ..++.+.|.++|+.+-++....                  
T Consensus       271 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~  340 (379)
T TIGR03402       271 LLARIPDARLNGDPTKRLPNTVNISFEYIE----------GEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHT  340 (379)
T ss_pred             HHhhCCCEEEeCCCccCCCCEEEEEecCCC----------HHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChh
Confidence            986 89999886432   346777765432          3466777767775443322110                  


Q ss_pred             -CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          461 -GLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       461 -g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                       ....+|+|+ ++++|++|||++++.|+++.+++.+
T Consensus       341 ~~~~~vR~S~-~~~~t~~di~~~~~~l~~~~~~~~~  375 (379)
T TIGR03402       341 AAHGSIRFSL-SRYNTEEDIDYVLEVLPPIIARLRA  375 (379)
T ss_pred             hcCceEEEEc-CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence             125799999 5999999999999999998877543

Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.

>cd06453 SufS_like Cysteine desulfurase (SufS)-like

Probab=99.97  E-value=3.3e-28  Score=246.28  Aligned_cols=318  Identities=15%  Similarity=0.159  Sum_probs=225.4

Q ss_pred             ccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842          120 NWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH  198 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H  198 (499)
                      .+..++.......++++++++++|.+ +.       ..++|+|+|+|+..++.+....        ..++..|+++..+|
T Consensus        34 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~-------~v~~~~g~t~a~~~~~~~l~~~--------~~~g~~vl~~~~~~   98 (373)
T cd06453          34 VHELSARATDAYEAAREKVARFINAPSPD-------EIIFTRNTTEAINLVAYGLGRA--------NKPGDEIVTSVMEH   98 (373)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCCCCCC-------eEEEeCCHHHHHHHHHHHhhhc--------CCCCCEEEECcchh
Confidence            44556667788888899999999987 33       3589999999988888776431        01355788899999


Q ss_pred             hhH----HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH
Q 010842          199 STF----AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE  274 (499)
Q Consensus       199 ~s~----~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~  274 (499)
                      ++.    .+.++..|+   +++.||++.+  +.+|+++|++.+.+++      .+|++++++|++|.+.|+++|+++|++
T Consensus        99 ~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~l~~~~------~~v~~~~~~~~tG~~~~~~~i~~~~~~  167 (373)
T cd06453          99 HSNIVPWQQLAERTGA---KLKVVPVDDD--GQLDLEALEKLLTERT------KLVAVTHVSNVLGTINPVKEIGEIAHE  167 (373)
T ss_pred             HHHHHHHHHHHhhcCc---EEEEeecCCC--CCcCHHHHHHHhcCCc------eEEEEeCcccccCCcCCHHHHHHHHHH
Confidence            884    445567788   9999998854  5899999999997643      478899999999999999999999999


Q ss_pred             hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCC--
Q 010842          275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESN--  352 (499)
Q Consensus       275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~--  352 (499)
                      +|+|+|+|++|+.+....+ ..    . .++|++++++|||++. .++|+++++++ .+ +.+.   .+..+......  
T Consensus       168 ~~~~li~D~a~~~~~~~~~-~~----~-~~~d~~~~s~~K~~~~-~g~g~~~~~~~-~~-~~~~---~~~~g~~~~~~~~  235 (373)
T cd06453         168 AGVPVLVDGAQSAGHMPVD-VQ----D-LGCDFLAFSGHKMLGP-TGIGVLYGKEE-LL-EEMP---PYGGGGEMIEEVS  235 (373)
T ss_pred             cCCEEEEEhhhhcCceeee-cc----c-cCCCEEEeccccccCC-CCcEEEEEchH-Hh-hcCC---CeecCCCcccccc
Confidence            9999999999976543221 11    1 1489999999999987 68898888754 22 2221   11111100000  


Q ss_pred             -CcccCC--CcccCCCCC--CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC--CceEEEEEec
Q 010842          353 -SVVDFK--DWQVGTGRR--FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR--HFALVCFRLN  425 (499)
Q Consensus       353 -~~~~~~--~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~~~~v~f~~~  425 (499)
                       ....+.  ......+.+  ...+.+|.+++.+...+++++.++..++++++.+.|+++|+++++.++  ..++++|.+.
T Consensus       236 ~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~  315 (373)
T cd06453         236 FEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLE  315 (373)
T ss_pred             ccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEEC
Confidence             000000  001111111  134678888988888899999999999999999999999999988532  4567888764


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee--------ECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842          426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI--------VGGLYMLRFAVGASLTDERHVVAAWELI  486 (499)
Q Consensus       426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~g~~~lRi~~~~~~~t~~di~~l~~~l  486 (499)
                      ...          ..++.++|.++|+.+..+..        .+...++|+++. +.+|++|+|+++++|
T Consensus       316 ~~~----------~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~-~~~t~~di~~~~~~l  373 (373)
T cd06453         316 GIH----------PHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFG-LYNTEEEIDALVEAL  373 (373)
T ss_pred             CcC----------HHHHHHHHHHCCEEeccCccchhHHHHHhCCCCeEEEEec-CCCCHHHHHHHHhhC
Confidence            322          35677788777865432221        112457999995 889999999999864

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.

>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated

Probab=99.97  E-value=6e-28  Score=246.89  Aligned_cols=352  Identities=15%  Similarity=0.131  Sum_probs=240.6

Q ss_pred             cccccCCCCCChHHHHHHHHHHHc-----ccCCcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHH
Q 010842           91 NFFAFFPATVSTAGFLGEMLCACF-----NSVGFNWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSD  164 (499)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~  164 (499)
                      .|+.+-..++.+..++ +.+..++     |+....+..++.......++++.+++++|.+ ++       ..++|+|+|+
T Consensus        25 iYld~a~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~-------~v~~t~g~t~   96 (406)
T PRK09295         25 AYLDSAASAQKPSQVI-DAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAE-------ELVFVRGTTE   96 (406)
T ss_pred             EEEeCcccccCCHHHH-HHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCC-------eEEEeCCHHH
Confidence            6788776666555544 4443333     2212233345556666777889999999973 33       3689999999


Q ss_pred             HHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh----HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHH
Q 010842          165 SILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST----FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEAD  240 (499)
Q Consensus       165 A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s----~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~  240 (499)
                      ++..++.+.......       ++..|+++...|.+    +...++..|+   +++.+|++++  +.+|+++|++++.++
T Consensus        97 ~l~~~~~~~~~~~~~-------~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~--~~~d~~~l~~~i~~~  164 (406)
T PRK09295         97 GINLVANSWGNSNVR-------AGDNIIISEMEHHANIVPWQMLCARVGA---ELRVIPLNPD--GTLQLETLPALFDER  164 (406)
T ss_pred             HHHHHHHHhhhhcCC-------CcCEEEECcchhhHHHHHHHHHHHHcCc---EEEEEecCCC--CCCCHHHHHHhcCCC
Confidence            987666543211111       45678889988876    3556677899   9999998764  489999999998654


Q ss_pred             HHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC
Q 010842          241 VEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL  320 (499)
Q Consensus       241 ~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~  320 (499)
                      +      .+|++++++|+||.+.|+++|+++|+++|++++||++|+.+....+-     .. ..+|++++++||+ ++|.
T Consensus       165 t------~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~-----~~-~~~D~~~~s~~K~-~gp~  231 (406)
T PRK09295        165 T------RLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDV-----QA-LDCDFYVFSGHKL-YGPT  231 (406)
T ss_pred             c------EEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCc-----hh-cCCCEEEeehhhc-cCCC
Confidence            4      48999999999999999999999999999999999999766433221     11 1489999999995 4588


Q ss_pred             cceEEEEeCchhHHHhhcCCccCCCCCCC-C---CCCcccC--CCcccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHH
Q 010842          321 DCCCLWVKQPGLLVKALSTDPEYLKNKPS-E---SNSVVDF--KDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSD  392 (499)
Q Consensus       321 ~~g~l~~r~~~~l~~~~~~~~~yl~~~~~-~---~~~~~~~--~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~  392 (499)
                      |+|+++++++. + +.+   +++..+... .   ......+  ....++.|.+.  ..+.+..+++.+...|++++.++.
T Consensus       232 G~G~l~~~~~~-~-~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~  306 (406)
T PRK09295        232 GIGILYVKEAL-L-QEM---PPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYE  306 (406)
T ss_pred             CcEEEEEchHh-H-hhC---CCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            99999997642 2 211   223222110 0   0000000  01122333222  235677778777667888888999


Q ss_pred             HHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee--------ECCEE
Q 010842          393 IRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI--------VGGLY  463 (499)
Q Consensus       393 ~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~g~~  463 (499)
                      .++++++.+.|+++++++++.+ ...++++|.+....          ...+.+.|.+.|+.+-++..        ++...
T Consensus       307 ~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~~----------~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~  376 (406)
T PRK09295        307 QNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHH----------AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPA  376 (406)
T ss_pred             HHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCcC----------HHHHHHHHHhCCeEEeccccchHHHHHHHCCCC
Confidence            9999999999999999998864 34678888875432          34566667777754432221        11124


Q ss_pred             EEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          464 MLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       464 ~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      ++|+|+ ++++|++|||+++++|+++..
T Consensus       377 ~iRiS~-~~ynt~~did~l~~~l~~i~~  403 (406)
T PRK09295        377 MCRASL-AMYNTHEEVDRLVAGLQRIHR  403 (406)
T ss_pred             EEEEEc-cCCCCHHHHHHHHHHHHHHHH
Confidence            799999 599999999999999998754

>PRK10874 cysteine sulfinate desulfinase; Provisional

Probab=99.97  E-value=7e-28  Score=246.16  Aligned_cols=355  Identities=16%  Similarity=0.146  Sum_probs=244.4

Q ss_pred             ccccccCCCCCChHHHHHHHHHHHcccC-----CcccccChhhHHHHHHHHHHHHHHcCC-CCccccCCCccEEEcCChH
Q 010842           90 PNFFAFFPATVSTAGFLGEMLCACFNSV-----GFNWLASPASTELEIVVMDWLATMLKL-PKTFMFSGTGGGVIQNTTS  163 (499)
Q Consensus        90 p~~~~~~~~~~~~~~~~~~~l~~~~n~~-----~~~~~~~p~~~~lE~~~~~~la~l~g~-~~~~~~~~~~~g~~t~ggt  163 (499)
                      ..|+.+-..++.+..++ +.+..++...     ...+..+........++++.+++++|. +.+       ..++|+|+|
T Consensus        20 ~~yld~a~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~-------~i~~~~~~t   91 (401)
T PRK10874         20 GVYLDSAATALKPQAVI-EATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAK-------NIVWTRGTT   91 (401)
T ss_pred             eEEEeCCcccCCCHHHH-HHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCC-------EEEEECCHH
Confidence            35777776665554444 4444444321     122233445566777788999999998 433       468899999


Q ss_pred             HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh----HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHH
Q 010842          164 DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST----FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEA  239 (499)
Q Consensus       164 ~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s----~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~  239 (499)
                      +++...+.+......       .++..|+++...|++    +.+.++..|+   +++.||++.+  +.+|++++++.+++
T Consensus        92 ~~i~~~~~~~~~~~~-------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~--~~~d~~~l~~~i~~  159 (401)
T PRK10874         92 ESINLVAQSYARPRL-------QPGDEIIVSEAEHHANLVPWLMVAQQTGA---KVVKLPLGAD--RLPDVDLLPELITP  159 (401)
T ss_pred             HHHHHHHHHhhhccC-------CCcCEEEECCcchHHHHHHHHHHHHHhCC---EEEEEecCCC--CcCCHHHHHHhcCc
Confidence            987776665421100       145689999999976    4566788899   9999998753  58999999999976


Q ss_pred             HHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC
Q 010842          240 DVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY  319 (499)
Q Consensus       240 ~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p  319 (499)
                      +++      +|++++++|+||.+.|+++|+++|+++|++++||++|+.+....+     +..+ .+|.+++++||+ ++|
T Consensus       160 ~t~------lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~-----~~~~-~~d~~~~s~~K~-~gp  226 (401)
T PRK10874        160 RTR------ILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPAD-----VQAL-DIDFYAFSGHKL-YGP  226 (401)
T ss_pred             CcE------EEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCC-----chhc-CCCEEEEecccc-cCC
Confidence            543      788999999999999999999999999999999999975543221     1112 389999999995 458


Q ss_pred             CcceEEEEeCchhHHHhhcCCccCCCCCCC-CCCC--cccC--CCcccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHH
Q 010842          320 LDCCCLWVKQPGLLVKALSTDPEYLKNKPS-ESNS--VVDF--KDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSD  392 (499)
Q Consensus       320 ~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~-~~~~--~~~~--~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~  392 (499)
                      .|+|+++++++. + +.+   .++..+... ....  ...+  ..+.++.|.+.  ..+.+..++..+...|+.+..++.
T Consensus       227 ~G~G~l~~~~~~-~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~  301 (401)
T PRK10874        227 TGIGVLYGKSEL-L-EAM---SPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWS  301 (401)
T ss_pred             CccEEEEEchHH-H-hcC---CCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence            899999987542 2 222   222211100 0000  0000  11122222222  345667777777677788888889


Q ss_pred             HHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE--------CCEEE
Q 010842          393 IRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV--------GGLYM  464 (499)
Q Consensus       393 ~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--------~g~~~  464 (499)
                      .++++++.+.|+++|+++++.++..++++|.+.+..          ..++.+.|.++|+++..+...        +...+
T Consensus       302 ~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~~----------~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~  371 (401)
T PRK10874        302 RSLATLAEDALAKLPGFRSFRCQDSSLLAFDFAGVH----------HSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGT  371 (401)
T ss_pred             HHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCcC----------HHHHHHHHHHCCcEEeccccchHHHHHHhCCCCE
Confidence            999999999999999999887777788888875422          356777777788755443322        22468


Q ss_pred             EEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          465 LRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       465 lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +|+|+. +++|++||++++++|+++++.+
T Consensus       372 iRiS~~-~~nt~edid~ll~al~~~~~~~  399 (401)
T PRK10874        372 LRASFA-PYNTQSDVDALVNAVDRALELL  399 (401)
T ss_pred             EEEEec-ccCCHHHHHHHHHHHHHHHHHh
Confidence            999995 8899999999999999987754

>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein

Probab=99.97  E-value=4.1e-28  Score=245.93  Aligned_cols=313  Identities=15%  Similarity=0.152  Sum_probs=221.3

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH----
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA----  202 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~----  202 (499)
                      ......++++++++++|.+...      ..++|+|+|+++.+++.+...           ++..|+++...|.++.    
T Consensus        42 ~~~~~~~~~~~la~~~~~~~~~------~v~~~~g~t~al~~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~  104 (376)
T TIGR01977        42 ASREVEETRQLLAKLFNAPSSA------HVVFTNNATTALNIALKGLLK-----------EGDHVITTPMEHNSVARPLE  104 (376)
T ss_pred             HHHHHHHHHHHHHHHhCcCCCC------eEEEeCCHHHHHHHHHHhccC-----------CCCEEEECcchhhHHHHHHH
Confidence            3456667788899999986431      358899999988777655311           4567888888998865    


Q ss_pred             HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842          203 KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD  282 (499)
Q Consensus       203 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD  282 (499)
                      ..++..|+   +++.|+.+.+  +.+|+++|+++++++      +.+|++++++|+||.+.|+++|.++|+++|++++||
T Consensus       105 ~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~~~~~------~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD  173 (376)
T TIGR01977       105 CLKEQIGV---EITIVKCDNE--GLISPERIKRAIKTN------TKLIVVSHASNVTGTILPIEEIGELAQENGIFFILD  173 (376)
T ss_pred             HHHHHcCc---EEEEEecCCC--CCcCHHHHHHhcCCC------CeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEE
Confidence            34556688   9999998754  589999999998643      448889999999999999999999999999999999


Q ss_pred             ccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCccc
Q 010842          283 AAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQV  362 (499)
Q Consensus       283 ~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~  362 (499)
                      +|++.+....+-.      -..+|++++++|||+++|.|+|++++++...+.........+ ......   ........+
T Consensus       174 ~a~~~g~~~~~~~------~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~r~  243 (376)
T TIGR01977       174 AAQTAGVIPIDMT------ELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGS-HSALID---QPSELPDRF  243 (376)
T ss_pred             hhhccCccCCCch------hcCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCcc-cccccc---ccccchhhc
Confidence            9998765433211      124999999999999999999999998865221111110000 000000   000000011


Q ss_pred             CCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC----CceEEEEEecCCCCCCcchhH
Q 010842          363 GTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR----HFALVCFRLNPYPHSGSADTE  436 (499)
Q Consensus       363 ~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~  436 (499)
                      +.+...  ....++.+++.+...|++.+.++..++++++.+.|++.++++++.+.    ..++++|...+..        
T Consensus       244 ~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------  315 (376)
T TIGR01977       244 ESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGID--------  315 (376)
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCCC--------
Confidence            222221  23566778888888899999999999999999999999999988642    3578888875432        


Q ss_pred             HHHHHHHHHHHhc-CCEEEEeeeE----------CCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          437 MLNRKLLDWVNST-GRVYLTHTIV----------GGLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       437 ~~~~~l~~~l~~~-g~~~~~~~~~----------~g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                        ..++.+.|.+. |+.+..+...          .....+|+++ +..+|++||++++++|++
T Consensus       316 --~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~-~~~~t~~dv~~~~~~l~~  375 (376)
T TIGR01977       316 --SEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSL-GYFNTEEEIEKLLEALSE  375 (376)
T ss_pred             --HHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEec-CCCCCHHHHHHHHHHHhh
Confidence              35677777776 6433222111          1235799998 489999999999999975

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.

>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA

Probab=99.97  E-value=8.2e-28  Score=245.40  Aligned_cols=354  Identities=16%  Similarity=0.131  Sum_probs=242.0

Q ss_pred             cccccCCCCCChHHHHHHHHHHHccc---C--CcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHH
Q 010842           91 NFFAFFPATVSTAGFLGEMLCACFNS---V--GFNWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSD  164 (499)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~~n~---~--~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~  164 (499)
                      .|+.+-..++.+. .+.+.+..++..   +  ...+..++...+...++++.+++++|.+ .+       ..++|+|+|+
T Consensus        18 iyld~a~~~~~p~-~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~-------~i~~t~g~t~   89 (398)
T TIGR03392        18 VYLDSAATALKPQ-AVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAE-------NIVWTRGTTE   89 (398)
T ss_pred             EEeeCccccCCCH-HHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCC-------eEEEeCChHH
Confidence            5777766665444 445555554421   1  1122233445566677889999999985 33       3589999999


Q ss_pred             HHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh----HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHH
Q 010842          165 SILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST----FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEAD  240 (499)
Q Consensus       165 A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s----~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~  240 (499)
                      ++..++.+......       .++..|+++...|++    +...++..|+   +++.+|++.+  +.+|+++|++++.++
T Consensus        90 ~l~~~~~~~~~~~~-------~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~--~~~~~~~l~~~i~~~  157 (398)
T TIGR03392        90 SINLVAQSYARPRL-------QPGDEIIVSEAEHHANLIPWLMVAQQTGA---KVVKLPIGAD--LLPDIRQLPELLTPR  157 (398)
T ss_pred             HHHHHHHHhhhccC-------CCCCEEEECCcchhHHHHHHHHHHHHcCc---EEEEEecCCC--CCcCHHHHHHHhccC
Confidence            98877765421100       145679999999977    4556788899   9999999764  489999999998765


Q ss_pred             HHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC
Q 010842          241 VEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL  320 (499)
Q Consensus       241 ~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~  320 (499)
                      ++      +|++++++|+||.+.|+++|+++|+++|+++++|++|+.+....+ .    ..+ .+|.+++++||++ .|.
T Consensus       158 t~------lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~-~----~~~-~~d~~~~s~~K~~-gp~  224 (398)
T TIGR03392       158 TR------ILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPD-V----QAL-DIDFYAFSGHKLY-GPT  224 (398)
T ss_pred             ce------EEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCC-h----hhc-CCCEEEEeccccc-CCC
Confidence            43      788899999999999999999999999999999999976543221 1    111 3899999999955 588


Q ss_pred             cceEEEEeCchhHHHhhcCCccCCCCCCC-CCCC--cccC--CCcccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHH
Q 010842          321 DCCCLWVKQPGLLVKALSTDPEYLKNKPS-ESNS--VVDF--KDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDI  393 (499)
Q Consensus       321 ~~g~l~~r~~~~l~~~~~~~~~yl~~~~~-~~~~--~~~~--~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~  393 (499)
                      |+|+++++++ .+ +.+   +++...... ....  ...+  ..+.++.|.+.  ..+.+..+++.+...|++++.++..
T Consensus       225 G~G~l~~~~~-~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~  299 (398)
T TIGR03392       225 GIGVLYGKTE-LL-EAM---PPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSV  299 (398)
T ss_pred             ceEEEEEcHH-HH-hhC---CCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            9999988754 22 222   222211100 0000  0000  01122222222  2356777777776678888889999


Q ss_pred             HHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE--------CCEEEE
Q 010842          394 RLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV--------GGLYML  465 (499)
Q Consensus       394 ~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--------~g~~~l  465 (499)
                      ++++++.+.|+++|++++..++..++++|.+.+..          .+.+.+.|.++|+.+..+...        +...++
T Consensus       300 ~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~----------~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~i  369 (398)
T TIGR03392       300 SLADLAEERLAQLPGFRSFRCPGSSLLAFDFAGVH----------HSDLAALLAESGIALRAGQHCAQPLMAALGVSGTL  369 (398)
T ss_pred             HHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCcC----------HHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEE
Confidence            99999999999999999887677788888865432          356777777777544333211        123589


Q ss_pred             EEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          466 RFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       466 Ri~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      |+|+. +++|++||++++++|+++++.+
T Consensus       370 RvS~~-~~~t~~ei~~l~~~l~~~~~~~  396 (398)
T TIGR03392       370 RASFA-PYNTQQDVDALVDAVGAALELL  396 (398)
T ss_pred             EEEee-ccCCHHHHHHHHHHHHHHHHHh
Confidence            99995 8899999999999999987653

Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.

>TIGR01979 sufS cysteine desulfurases, SufS subfamily

Probab=99.97  E-value=9.5e-28  Score=245.47  Aligned_cols=355  Identities=16%  Similarity=0.126  Sum_probs=238.3

Q ss_pred             cccccCCCCCChHHHHHHHHHHHcc-----cCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHH
Q 010842           91 NFFAFFPATVSTAGFLGEMLCACFN-----SVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDS  165 (499)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~~n-----~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A  165 (499)
                      .|+.+-..++.+.. +.+.+..++.     ++...+..++.....-.++++.+++++|.+..      ...++|+|+|++
T Consensus        20 ~yld~~~~~~~p~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~------~~v~~~~g~t~~   92 (403)
T TIGR01979        20 VYLDSAATSQKPQQ-VIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASD------EEIVFTRGTTES   92 (403)
T ss_pred             EEEeCccccCCCHH-HHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCC------CeEEEeCCHHHH
Confidence            46666655544443 4455544432     22122333344555566788889999999732      146899999998


Q ss_pred             HHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH----HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH
Q 010842          166 ILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF----AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV  241 (499)
Q Consensus       166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~----~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~  241 (499)
                      +..++.+.......       ++..|+++...|.+.    .+.++..|+   +++.||++++  +.+|+++|++.+.+++
T Consensus        93 l~~~~~~~~~~~~~-------~g~~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~v~~~~~--~~~~~~~l~~~i~~~~  160 (403)
T TIGR01979        93 INLVAYSWGDSNLK-------AGDEIVISEMEHHANIVPWQLLAERTGA---TLKFIPLDDD--GTLDLDDLEKLLTEKT  160 (403)
T ss_pred             HHHHHHHhhhhcCC-------CCCEEEECcchhhHHHHHHHHHHHhcCc---EEEEEecCCC--CCCCHHHHHHHhccCC
Confidence            77666554221111       466899999998873    466778898   9999999854  5899999999986543


Q ss_pred             HcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc
Q 010842          242 EAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD  321 (499)
Q Consensus       242 ~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~  321 (499)
                            .+|++++++|++|.+.|+++|+++|+++|+++|||++|+.+....+ .    ... .+|++++++||+++ |.|
T Consensus       161 ------~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~-~----~~~-~~d~~~~s~~K~~g-p~G  227 (403)
T TIGR01979       161 ------KLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVD-V----QAL-DCDFYVFSGHKMYG-PTG  227 (403)
T ss_pred             ------eEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccC-c----ccc-CCCEEEEecccccC-CCC
Confidence                  4889999999999999999999999999999999999976543221 1    111 48999999999764 889


Q ss_pred             ceEEEEeCchhHHHhhcCCccCCCCCCCC-C----CCcccCCCcccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHHH
Q 010842          322 CCCLWVKQPGLLVKALSTDPEYLKNKPSE-S----NSVVDFKDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDIR  394 (499)
Q Consensus       322 ~g~l~~r~~~~l~~~~~~~~~yl~~~~~~-~----~~~~~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~  394 (499)
                      +|++++++. .+ +.+   .++..+.... .    ........+.++.+.+.  ..+.++.+++.+...|++++.++..+
T Consensus       228 ~g~l~~~~~-~~-~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~  302 (403)
T TIGR01979       228 IGVLYGKEE-LL-EQM---PPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHE  302 (403)
T ss_pred             ceEEEEchH-HH-hcC---CCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence            999998754 22 222   1121111000 0    00000001112222221  23566777777766678889999999


Q ss_pred             HHHHHHHHHhcCCCeEEEcCC----CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee--------eECCE
Q 010842          395 LAKMFEGFVKSDPRFEIVVPR----HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT--------IVGGL  462 (499)
Q Consensus       395 ~a~~l~~~L~~~~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--------~~~g~  462 (499)
                      +++++.+.|+++++++++.++    ..++++|.+.+..          ..++.+.|.+.|+.+-.+.        .+...
T Consensus       303 l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~----------~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~  372 (403)
T TIGR01979       303 LTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVH----------PHDVGTILDEEGIAVRSGHHCAQPLMRRFGVP  372 (403)
T ss_pred             HHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcC----------HHHHHHHHhhCCEEEcchhhhhHHHHHHhCCC
Confidence            999999999999999998643    3678888875432          3456677777775432211        11223


Q ss_pred             EEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          463 YMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       463 ~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .++|+|+. +++|++||++++++|+++.+.+
T Consensus       373 ~~iRiS~~-~~~t~~di~~l~~~l~~~~~~~  402 (403)
T TIGR01979       373 ATCRASFY-IYNTEEDIDALVEALKKVRKFF  402 (403)
T ss_pred             CEEEEEec-cCCCHHHHHHHHHHHHHHHHHh
Confidence            57999994 8899999999999999887754

This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.

>PLN02651 cysteine desulfurase

Probab=99.96  E-value=1.5e-27  Score=240.31  Aligned_cols=296  Identities=16%  Similarity=0.128  Sum_probs=210.9

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK  203 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k  203 (499)
                      ++....+.+++++.+++++|.+++       ..++|+|+|+|+..++..+.....+       ++..|+++...|+++..
T Consensus        38 ~~~~~~~~~~~r~~la~~~g~~~~-------~v~~t~~~t~a~~~~l~~~~~~~~~-------~g~~vl~~~~~h~s~~~  103 (364)
T PLN02651         38 GWESEDAVEKARAQVAALIGADPK-------EIIFTSGATESNNLAIKGVMHFYKD-------KKKHVITTQTEHKCVLD  103 (364)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHHHHHHHHHHHHHhccC-------CCCEEEEcccccHHHHH
Confidence            355567777889999999998754       3699999999999888776543211       45678889999999766


Q ss_pred             HHH---HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842          204 VCK---LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH  280 (499)
Q Consensus       204 a~~---~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh  280 (499)
                      .+.   ..|+   +++.+|++++  +.+|+++|+++|+++++      +|++++++|++|.+.|+++|+++||++|+|+|
T Consensus       104 ~~~~~~~~g~---~v~~v~~~~~--~~~d~~~l~~~i~~~t~------lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~  172 (364)
T PLN02651        104 SCRHLQQEGF---EVTYLPVKSD--GLVDLDELAAAIRPDTA------LVSVMAVNNEIGVIQPVEEIGELCREKKVLFH  172 (364)
T ss_pred             HHHHHHhcCC---EEEEEccCCC--CcCCHHHHHHhcCCCcE------EEEEECCCCCceecccHHHHHHHHHHcCCEEE
Confidence            554   3477   8999998754  58999999999976543      78999999999999999999999999999999


Q ss_pred             eeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCc
Q 010842          281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDW  360 (499)
Q Consensus       281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~  360 (499)
                      ||++++.+....+-     ..+ ++|++++++||| ++|.|+|+++++++...    ...+.+ .+....         .
T Consensus       173 vD~a~~~g~~~~~~-----~~~-~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~----~l~p~~-~g~~~~---------~  231 (364)
T PLN02651        173 TDAAQAVGKIPVDV-----DDL-GVDLMSISGHKI-YGPKGVGALYVRRRPRV----RLEPLM-SGGGQE---------R  231 (364)
T ss_pred             EEcchhhCCcccCc-----ccC-CCCEEEechhhh-CCCCceEEEEEcCCCCC----CCCccc-cCCCcc---------C
Confidence            99999877554321     111 389999999998 67999999999975321    111221 111100         0


Q ss_pred             cc-CCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEcC--CC---ceEEEEEecCCCCCCc
Q 010842          361 QV-GTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEIVVP--RH---FALVCFRLNPYPHSGS  432 (499)
Q Consensus       361 ~~-~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~--~~---~~~v~f~~~~~~~~~~  432 (499)
                      .. .++... ..+.+..++..+.. +.+++.++..++++++.+.|++ +|+++++.+  +.   .++++|.+.+..    
T Consensus       232 ~~~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~----  306 (364)
T PLN02651        232 GRRSGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVE----  306 (364)
T ss_pred             CccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCCC----
Confidence            01 122222 23456666666643 4588889999999999999985 689999874  22   358888885432    


Q ss_pred             chhHHHHHHHHHHHHhcCCEEEEeee---------------EC-----CEEEEEEeccCCCCcHHHHH
Q 010842          433 ADTEMLNRKLLDWVNSTGRVYLTHTI---------------VG-----GLYMLRFAVGASLTDERHVV  480 (499)
Q Consensus       433 ~~~~~~~~~l~~~l~~~g~~~~~~~~---------------~~-----g~~~lRi~~~~~~~t~~di~  480 (499)
                            .+++.++|.+   +.++.+.               ++     ..+.+|+|+ +++||++|||
T Consensus       307 ------~~~~~~~L~~---i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~-~~~~t~~did  364 (364)
T PLN02651        307 ------GESLLMGLKE---VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGV-GRFTTEEEVD  364 (364)
T ss_pred             ------HHHHHHHhCC---EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEc-CCCCCHHHcC
Confidence                  3456666633   3333211               01     136899999 5999999985

>TIGR02006 IscS cysteine desulfurase IscS

Probab=99.96  E-value=1.2e-26  Score=236.75  Aligned_cols=342  Identities=15%  Similarity=0.162  Sum_probs=224.8

Q ss_pred             ccccccCCCCCChHHHHHHHHHHHcc---cCCc--ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHH
Q 010842           90 PNFFAFFPATVSTAGFLGEMLCACFN---SVGF--NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSD  164 (499)
Q Consensus        90 p~~~~~~~~~~~~~~~~~~~l~~~~n---~~~~--~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~  164 (499)
                      +.|+.+-..++.++.++. .+..++.   .+..  .+..+.......+++++.+++++|.+++       ..++++|+|+
T Consensus         4 ~~yld~aa~~~~~~~v~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~v~~~~g~t~   75 (402)
T TIGR02006         4 PIYLDYAATTPVDPRVAE-KMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-------EIVFTSGATE   75 (402)
T ss_pred             cEEeeCCcCCCCCHHHHH-HHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHH
Confidence            457777766665555544 3333331   1111  1111222345566678889999998754       3699999999


Q ss_pred             HHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH---hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH
Q 010842          165 SILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL---AGVSPANIRALPTSVDANFSLSPQLLRRAVEADV  241 (499)
Q Consensus       165 A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~---~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~  241 (499)
                      ++..++.+......+       ++..|+++..+|.++..++..   .|+   +++.||++++  +.+|+++|++++.+++
T Consensus        76 a~~~~l~~l~~~~~~-------~g~~Vi~~~~~h~s~~~~~~~~~~~g~---~v~~v~~~~~--~~~d~~~l~~~l~~~~  143 (402)
T TIGR02006        76 SNNLAIKGIAHFYKS-------KGNHIITSKTEHKAVLDTCRYLEREGF---EVTYLPPKSN--GLIDLEELKAAIRDDT  143 (402)
T ss_pred             HHHHHHHHHHHhhcC-------CCCEEEECCCccHHHHHHHHHHHhcCC---EEEEEccCCC--CcCCHHHHHHhcCCCC
Confidence            998887665432111       456788899999998777644   477   9999998864  4899999999986543


Q ss_pred             HcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc
Q 010842          242 EAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD  321 (499)
Q Consensus       242 ~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~  321 (499)
                            .+|++++++|++|.+.|+++|+++|+++|+|+|||++++.+....+-     .. ..+|++++++||++ +|.|
T Consensus       144 ------~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~-----~~-~~~D~~~~s~~K~~-gp~G  210 (402)
T TIGR02006       144 ------ILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINV-----NE-LKVDLMSISGHKIY-GPKG  210 (402)
T ss_pred             ------EEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCc-----cc-cCCCEEEEehhhhc-CCCc
Confidence                  48889999999999999999999999999999999999876543221     11 14999999999975 5999


Q ss_pred             ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCC-CC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 010842          322 CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR-RF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMF  399 (499)
Q Consensus       322 ~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr-~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l  399 (499)
                      +|+++++++...    ...+ .+.....         ....+.+. .. ..+.+..+++.+ .++++.+.++..++++++
T Consensus       211 ~G~l~~~~~~~~----~~~~-~~~g~~~---------~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l  275 (402)
T TIGR02006       211 IGALYVRRKPRV----RLEA-LIHGGGH---------ERGMRSGTLPTHQIVGMGEAFRIA-KEEMAQDTAHVLALRDRL  275 (402)
T ss_pred             eEEEEEccCCCC----CCCc-eecCCCc---------cCCccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHH
Confidence            999999875321    1111 1111100         00111111 11 123344455544 356888889999999999


Q ss_pred             HHHHhcCCCeEEEcCC--Cc-e--EEEEEecCCCCCCcchhHHHHHHHHHHHH----hcCCEEEEeeeE-----------
Q 010842          400 EGFVKSDPRFEIVVPR--HF-A--LVCFRLNPYPHSGSADTEMLNRKLLDWVN----STGRVYLTHTIV-----------  459 (499)
Q Consensus       400 ~~~L~~~~~~~~~~~~--~~-~--~v~f~~~~~~~~~~~~~~~~~~~l~~~l~----~~g~~~~~~~~~-----------  459 (499)
                      .+.|+++|+++++.++  .. .  .++|...+            .+.+...+.    ..|..+ ++...           
T Consensus       276 ~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~------------~~~~~~~l~~i~v~~G~~c-~~~~~~~~~~l~~lg~  342 (402)
T TIGR02006       276 LNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVE------------GESLIMALKDLAVSSGSAC-TSASLEPSYVLRALGI  342 (402)
T ss_pred             HHHHhcCCCEEEeCCccccCCCeEEEEEeCcC------------HHHHHHhcCCEEEechhhc-CCCCCCccHHHHHcCC
Confidence            9999999998887532  22 2  34444221            122333331    122222 11100           


Q ss_pred             ---CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          460 ---GGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       460 ---~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                         ....++|+|+ ++.+|++|||+++++|+++.+++
T Consensus       343 ~~~~~~~~vR~S~-~~~~t~edid~l~~~l~~~~~~~  378 (402)
T TIGR02006       343 NDELAHSSIRFTI-GRFTTEEEIDYAVKLVKSAIDKL  378 (402)
T ss_pred             ChhhcCceEEEEe-cCCCCHHHHHHHHHHHHHHHHHH
Confidence               0136899999 58899999999999999988775

This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.

>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase

Probab=99.96  E-value=1.7e-26  Score=237.47  Aligned_cols=356  Identities=14%  Similarity=0.123  Sum_probs=236.6

Q ss_pred             ccccccCCCCCChHHHHHHHHHHHccc---CCc--ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHH
Q 010842           90 PNFFAFFPATVSTAGFLGEMLCACFNS---VGF--NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSD  164 (499)
Q Consensus        90 p~~~~~~~~~~~~~~~~~~~l~~~~n~---~~~--~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~  164 (499)
                      ..|+.+-..++ +|..+.+.+..++..   +..  .+..+........++++.+++++|.++.      ...++|+|+|+
T Consensus        33 ~iyLd~a~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~------~~v~~t~g~t~  105 (424)
T PLN02855         33 LVYLDNAATSQ-KPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTS------REIVFTRNATE  105 (424)
T ss_pred             eEEeeCccccC-CCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCC------CEEEEeCCHHH
Confidence            46788755554 444444555444321   111  1122233444556778899999998532      13699999999


Q ss_pred             HHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh----HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHH
Q 010842          165 SILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST----FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEAD  240 (499)
Q Consensus       165 A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s----~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~  240 (499)
                      ++...+.........       ++..|+++...|++    +...++..|+   +++.||++.++  .+|+++|++.|.++
T Consensus       106 al~~i~~~~~~~~~~-------~gd~vl~~~~~~~s~~~~~~~~a~~~g~---~v~~v~~~~~~--~~~~~~l~~~i~~~  173 (424)
T PLN02855        106 AINLVAYTWGLANLK-------PGDEVILSVAEHHSNIVPWQLVAQKTGA---VLKFVGLTPDE--VLDVEQLKELLSEK  173 (424)
T ss_pred             HHHHHHHHhhhhcCC-------CcCEEEECCCccHHHHHHHHHHHHHcCC---EEEEEecCCCC--CcCHHHHHHHhccC
Confidence            877665532100001       45678889888886    3455677898   99999987654  79999999999754


Q ss_pred             HHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC
Q 010842          241 VEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL  320 (499)
Q Consensus       241 ~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~  320 (499)
                      +      .+|++++++|+||.+.|+++|+++|+++|++++||++|+.+....+     +... .+|.+++++||+ ++|.
T Consensus       174 t------~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~-----~~~~-~~d~~~~s~~K~-~gp~  240 (424)
T PLN02855        174 T------KLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVD-----VQTL-GADFLVASSHKM-CGPT  240 (424)
T ss_pred             c------eEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCC-----chhc-CCCEEEeecccc-cCCC
Confidence            3      4889999999999999999999999999999999999975533221     1111 379999999995 5688


Q ss_pred             cceEEEEeCchhHHHhhcCCccCCCCCCCCCCC---cccCC--CcccCCCCC-C-CcHHHHHHHHHhcHHHHHHHHHHHH
Q 010842          321 DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS---VVDFK--DWQVGTGRR-F-KSLRLWMVLRSYGVLNLQSHIRSDI  393 (499)
Q Consensus       321 ~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~---~~~~~--~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~~~~  393 (499)
                      |+|++++++.. + +.+   ++++.+.......   ...+.  ...++.|.+ . ....+..+++.+...|++++.++..
T Consensus       241 G~G~l~~~~~~-~-~~~---~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~  315 (424)
T PLN02855        241 GIGFLWGKSDL-L-ESM---PPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEV  315 (424)
T ss_pred             ccEEEEEchhh-h-hcC---CCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence            99999998642 2 222   2222211100000   00000  001122211 1 2345667777776678999999999


Q ss_pred             HHHHHHHHHHhcCCCeEEEcCC------CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeee--------
Q 010842          394 RLAKMFEGFVKSDPRFEIVVPR------HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTI--------  458 (499)
Q Consensus       394 ~~a~~l~~~L~~~~~~~~~~~~------~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~--------  458 (499)
                      ++++++++.|+++|+++++.+.      ..++++|.+....          ..++.+.|.++ |+.+-.+..        
T Consensus       316 ~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~----------~~~v~~~L~~~~gI~v~~g~~c~~~~~~~  385 (424)
T PLN02855        316 ELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIH----------PTDLSTFLDQQHGVAIRSGHHCAQPLHRY  385 (424)
T ss_pred             HHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcC----------HHHHHHHhcccCCEEEechhhhhHHHHHH
Confidence            9999999999999999998642      3578888875432          34677777776 643322211        


Q ss_pred             ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          459 VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       459 ~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .+-..++|+|+ ++++|++||++++++|+++++.+
T Consensus       386 ~g~~~~iRiS~-~~ynt~~di~~l~~~l~~~~~~~  419 (424)
T PLN02855        386 LGVNASARASL-YFYNTKEEVDAFIHALKDTIAFF  419 (424)
T ss_pred             hCCCCeEEEEe-ccCCCHHHHHHHHHHHHHHHHHH
Confidence            11135799999 69999999999999999988764

>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type

Probab=99.96  E-value=5.6e-26  Score=230.64  Aligned_cols=311  Identities=16%  Similarity=0.156  Sum_probs=211.3

Q ss_pred             hhHHHHHHHHHHHHHHcCC-CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842          126 ASTELEIVVMDWLATMLKL-PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       126 ~~~~lE~~~~~~la~l~g~-~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka  204 (499)
                      ....++++. ..+.+.+|. +.+       ..++|+|+|+++..++.+.......+     .++..|+++...|+++...
T Consensus        40 ~~~~l~~a~-~~~~~~~~~~~~~-------~i~~t~g~teal~~~~~~~~~~~~~~-----~~~~~vi~~~~e~ps~~~~  106 (382)
T TIGR03403        40 THPAIAEAL-DKLYKGINARDLD-------DIIITSCATESNNWVLKGVYFDEILK-----GGKNHIITTEVEHPAVRAT  106 (382)
T ss_pred             HHHHHHHHH-HHHHHHcCcCCCC-------eEEEeCCHHHHHHHHHHHHHHhhccc-----CCCCEEEEcCCccHHHHHH
Confidence            334555544 444556665 333       46899999999988887653211000     0245688898999887766


Q ss_pred             H---HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842          205 C---KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV  281 (499)
Q Consensus       205 ~---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv  281 (499)
                      .   +..|+   +++.||++++  +.+|+++|++++.+++      .+|++++++|+||.+.|+++|+++|+++|+++|+
T Consensus       107 ~~~~~~~G~---~v~~v~~~~~--g~~d~~~l~~~i~~~t------~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~iv  175 (382)
T TIGR03403       107 CAFLESLGV---EVTYLPINEQ--GTITAEQVREAITEKT------ALVSVMWANNETGMIFPIKEIGEICKERGVLFHT  175 (382)
T ss_pred             HHHHHHCCC---EEEEEecCCC--CCCCHHHHHHhcccCC------eEEEEEcccCCCccccCHHHHHHHHHHcCCEEEE
Confidence            4   45677   9999999865  4899999999987644      3788999999999999999999999999999999


Q ss_pred             eccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcc
Q 010842          282 DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQ  361 (499)
Q Consensus       282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~  361 (499)
                      |++++.+....+..      -..+|++++++|||+ +|.|+|++++|+...+      .+ .+.+....    ....   
T Consensus       176 D~a~~~g~~~~~~~------~~~~D~~~~s~~K~~-gp~G~g~l~vr~~~~~------~p-~~~g~~~~----~~~~---  234 (382)
T TIGR03403       176 DAVQAIGKIPVDVQ------KAGVDFLSFSAHKFH-GPKGVGGLYIRKGVEL------TP-LFHGGEHM----GGRR---  234 (382)
T ss_pred             echhhcCCCccCcc------ccCCCEEEEcchhhC-CCCceEEEEECCCCCC------CC-cccCCCCC----CCcc---
Confidence            99987654322211      124899999999985 5889999999875321      11 22111100    0000   


Q ss_pred             cCCCCCCCc-HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC--C-ceEEEEEecCCCCCCcchhHH
Q 010842          362 VGTGRRFKS-LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR--H-FALVCFRLNPYPHSGSADTEM  437 (499)
Q Consensus       362 ~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~-~~~v~f~~~~~~~~~~~~~~~  437 (499)
                       .++....+ +.+..+++.. .+.++...++..++++++.+.|+++|+++++.++  . .+++.|.+....         
T Consensus       235 -~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  303 (382)
T TIGR03403       235 -SGTLNVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGVE---------  303 (382)
T ss_pred             -cCCcChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCCC---------
Confidence             01111112 2444455543 3457778889999999999999999999988653  2 346677765432         


Q ss_pred             HHHHHHHHHHhcCCEEEEeeeE--------------C-----CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          438 LNRKLLDWVNSTGRVYLTHTIV--------------G-----GLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       438 ~~~~l~~~l~~~g~~~~~~~~~--------------~-----g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                       ...+...|.++|+.+-.+...              +     ....+|+|++ +.+|++|||+++++|+++.+++.
T Consensus       304 -~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~-~~~t~~did~~~~~l~~~~~~~~  377 (382)
T TIGR03403       304 -GEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLS-RFTTEEEIDYTIEVFKKAVQRLR  377 (382)
T ss_pred             -HHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence             345666677777544322111              0     1257999995 89999999999999999887753

Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.

>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family

Probab=99.96  E-value=1.2e-26  Score=233.49  Aligned_cols=342  Identities=11%  Similarity=0.006  Sum_probs=233.0

Q ss_pred             ccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHH
Q 010842           94 AFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAA  173 (499)
Q Consensus        94 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~a  173 (499)
                      .+.+++...+..+.+.+...+.    . ..++...++.+++++++++++|.+...      ..++++|||+|+..++.+.
T Consensus         2 ~~~~~~~~~~~~v~~a~~~~~~----~-~~~~~~~~~~~~~~~~la~~~g~~~~~------~~~~~~~~t~al~~~~~~~   70 (356)
T cd06451           2 LLIPGPSNVPPRVLKAMNRPML----G-HRSPEFLALMDEILEGLRYVFQTENGL------TFLLSGSGTGAMEAALSNL   70 (356)
T ss_pred             cccCCCcCCCHHHHHHhCCCcc----C-CCCHHHHHHHHHHHHHHHHHhcCCCCC------EEEEecCcHHHHHHHHHHh
Confidence            3566666666666666643321    1 235667778888999999999995431      2578999999988887655


Q ss_pred             HHHHHhHhhhhccCCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEE
Q 010842          174 RDRALDAVGAENMHKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLC  251 (499)
Q Consensus       174 r~~~~~~~~~~g~~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv  251 (499)
                      ..           ++..|+++...|++  +...++..|+   +++.+|++++  +.+|+++|++.+++.     .|.+|+
T Consensus        71 ~~-----------~g~~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~~~~~l~~~i~~~-----~~~~v~  129 (356)
T cd06451          71 LE-----------PGDKVLVGVNGVFGDRWADMAERYGA---DVDVVEKPWG--EAVSPEEIAEALEQH-----DIKAVT  129 (356)
T ss_pred             CC-----------CCCEEEEecCCchhHHHHHHHHHhCC---CeEEeecCCC--CCCCHHHHHHHHhcc-----CCCEEE
Confidence            32           45568777778887  4677888999   9999998764  589999999999751     234788


Q ss_pred             EecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCch
Q 010842          252 ATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPG  331 (499)
Q Consensus       252 ~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~  331 (499)
                      +++++|++|.+.|+++|+++|+++|+++++|++|+.+....+.      .-..+|.++.++|||++.|.|+|+++++++.
T Consensus       130 i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~------~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~~  203 (356)
T cd06451         130 LTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRM------DEWGVDVAYTGSQKALGAPPGLGPIAFSERA  203 (356)
T ss_pred             EeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccc------cccCccEEEecCchhccCCCCcceeEECHHH
Confidence            8899999999999999999999999999999988644321111      0114799999999999999999999997642


Q ss_pred             hHHHhhc--C-CccCCCCCCCCCCCcccCCCcc-cCC-CCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 010842          332 LLVKALS--T-DPEYLKNKPSESNSVVDFKDWQ-VGT-GRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS  405 (499)
Q Consensus       332 ~l~~~~~--~-~~~yl~~~~~~~~~~~~~~~~~-~~~-sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~  405 (499)
                       ......  . ...|+....     ...+.... ... +-... ...+..++..+...++++..++..++++++.+.|++
T Consensus       204 -~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~  277 (356)
T cd06451         204 -LERIKKKTKPKGFYFDLLL-----LLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEA  277 (356)
T ss_pred             -HHHHHhcCCCCceeecHHH-----HHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence             322221  1 111111000     00000000 011 11111 235566777777788999999999999999999998


Q ss_pred             CCCeEEEcCC--CceEEE-EEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeECCEEEEEEeccCCCCcHHHHHH
Q 010842          406 DPRFEIVVPR--HFALVC-FRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVGGLYMLRFAVGASLTDERHVVA  481 (499)
Q Consensus       406 ~~~~~~~~~~--~~~~v~-f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~  481 (499)
                      . +++++.++  ..+.+. ++..+..         ...++.+.|.++ |+.+..+.......++|++++ +.+|++||++
T Consensus       278 ~-g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~-~~~~~e~v~~  346 (356)
T cd06451         278 L-GLKLLAKPELRSPTVTAVLVPEGV---------DGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHM-GEATREDVLG  346 (356)
T ss_pred             c-CCeeccCcccCCCceEEEECCCCC---------CHHHHHHHHHHhCCEEEecccccccCCEEEEecC-CCCCHHHHHH
Confidence            7 88887543  234443 4443210         145677888877 754433222222358999995 7899999999


Q ss_pred             HHHHHHHHH
Q 010842          482 AWELIMEGA  490 (499)
Q Consensus       482 l~~~l~~~~  490 (499)
                      ++++|+++.
T Consensus       347 ~~~~l~~~~  355 (356)
T cd06451         347 VLSALEEAL  355 (356)
T ss_pred             HHHHHHHHh
Confidence            999998864

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.

>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits

Probab=99.96  E-value=2.1e-26  Score=235.25  Aligned_cols=369  Identities=13%  Similarity=0.071  Sum_probs=234.6

Q ss_pred             HHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCccccc-----ChhhHHHHHHHHHHHHHHcCCC
Q 010842           71 TILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLA-----SPASTELEIVVMDWLATMLKLP  145 (499)
Q Consensus        71 ~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~-----~p~~~~lE~~~~~~la~l~g~~  145 (499)
                      +|++++..+-.++...-.+-..++-...+..+|..+.+..... . ....|..     ..+..++.+++.+++++++|.+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~   80 (398)
T cd00613           3 EVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILEN-E-FYTAYTPYQPEISQGRLQALFELQTMLCELTGMD   80 (398)
T ss_pred             HHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccc-c-CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC
Confidence            6777776643333322122245555445555666666655444 1 1122332     5677889999999999999987


Q ss_pred             CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC----CCCCCeEEeeCC
Q 010842          146 KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG----VSPANIRALPTS  221 (499)
Q Consensus       146 ~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G----~g~~~v~~v~~~  221 (499)
                      .+       ..+++.+|+.+...++.+++...        .++.+|+++...|.+...++..+|    .   +++.+|++
T Consensus        81 ~~-------~v~~~~~g~~~~~~~~~~~~~~~--------~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~---~~~~v~~~  142 (398)
T cd00613          81 VA-------NASLQDEATAAAEAAGLAAIRAY--------HKRNKVLVPDSAHPTNPAVARTRGEPLGI---EVVEVPSD  142 (398)
T ss_pred             cc-------ceeccCchHHHHHHHHHHHHhcc--------cCCCEEEEcCccCcchHHHHHHhcccCCc---EEEEeccC
Confidence            43       23566656655444444443210        036688899999999999998888    7   89999986


Q ss_pred             CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCCh-hHHHHHHHHhCCEEEeeccccchhccCccchhhhc
Q 010842          222 VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNV-EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN  300 (499)
Q Consensus       222 ~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l-~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~  300 (499)
                      ++  +.+|+++|++++.+++      .+|+++.++ ++|.+.|+ ++|+++|++||+|+|+|++++.+....+.      
T Consensus       143 ~~--~~~d~~~l~~~i~~~t------~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~------  207 (398)
T cd00613         143 EG--GTVDLEALKEEVSEEV------AALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPP------  207 (398)
T ss_pred             CC--CCcCHHHHHHhcCCCe------EEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCCh------
Confidence            53  4899999999886544      367788876 68999885 99999999999999999998654332211      


Q ss_pred             CCCCCceeEecccccccCCC-----cceEEEEeCchhHHHhhcCCccCCCCCCC-CCCCcccCCC----cccCCCC----
Q 010842          301 GIERVDSFSFSPHKWLLSYL-----DCCCLWVKQPGLLVKALSTDPEYLKNKPS-ESNSVVDFKD----WQVGTGR----  366 (499)
Q Consensus       301 g~~~aDsi~~~~hK~l~~p~-----~~g~l~~r~~~~l~~~~~~~~~yl~~~~~-~~~~~~~~~~----~~~~~sr----  366 (499)
                      +..++|++++++|||+ .|.     ++|++++++. .. +.+.....+...... ......++..    ...+.++    
T Consensus       208 ~~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~  284 (398)
T cd00613         208 GEYGADIVVGNLQKTG-VPHGGGGPGAGFFAVKKE-LV-RFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNIC  284 (398)
T ss_pred             HHcCCCEEEeeccccC-CCCCCCCCceeEEEEhhh-hH-hhCCCCeeccccccCCCcceEEecccchhhcccccccccce
Confidence            1114899999999999 664     4667877653 22 222111111100000 0000000000    0000111    


Q ss_pred             ---CCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHH
Q 010842          367 ---RFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLL  443 (499)
Q Consensus       367 ---~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~  443 (499)
                         ...+...|..+..++.++++++.++..++++++.+.|+++++......+...+++|++....       +....++.
T Consensus       285 ~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~-------~~~~~~~~  357 (398)
T cd00613         285 TGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLY-------GIRAEDLA  357 (398)
T ss_pred             ecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCcc-------hHHHHHHH
Confidence               11234567777888899999999999999999999999986654222344556677664310       12346677


Q ss_pred             HHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842          444 DWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI  486 (499)
Q Consensus       444 ~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l  486 (499)
                      ++|.++|+.+ ......+...+|+++ +..+|++|||+++++|
T Consensus       358 ~~L~~~gi~~-~~~~~~~~~~lRis~-~~~~t~edid~~~~~L  398 (398)
T cd00613         358 KALIDGGFHA-PTMYLPVDGTLMIEP-TETETKEELDALLEAL  398 (398)
T ss_pred             HhhhhcCccc-cccccCCCCeEEEEc-CCCCCHHHHHHHHHhC
Confidence            7888888643 221123446799999 6999999999999864

This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.95  E-value=7.3e-26  Score=245.99  Aligned_cols=390  Identities=13%  Similarity=0.012  Sum_probs=258.0

Q ss_pred             CCCC--CCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHH---cccC-CcccccChhhHHHHHHH
Q 010842           61 SAPH--RPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCAC---FNSV-GFNWLASPASTELEIVV  134 (499)
Q Consensus        61 ~~p~--~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~---~n~~-~~~~~~~p~~~~lE~~~  134 (499)
                      ..|.  .-.++.+++..+.++-.++..-.++-.-+|  .+.--+-+.+.+...+.   -+-. -..-++..+..++-.++
T Consensus       496 ~~p~f~~~~se~~~~r~~~~l~~~~~~~~~~~~plg--sctmk~n~~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~  573 (993)
T PLN02414        496 THPIFNQYHSEHELLRYLHRLQNKDLSLVHSMIPLG--SCTMKLNATTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDL  573 (993)
T ss_pred             cCcccccccCHHHHHHHHHHHhhcccccccCCccCc--ccccccCchhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHH
Confidence            4454  236889999999887666553322222222  11111112222222211   1101 11223445777888899


Q ss_pred             HHHHHHHcCCCCccccCCCccEEEcCChH----HHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCCchhHHHHHHHhC
Q 010842          135 MDWLATMLKLPKTFMFSGTGGGVIQNTTS----DSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHSTFAKVCKLAG  209 (499)
Q Consensus       135 ~~~la~l~g~~~~~~~~~~~~g~~t~ggt----~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~H~s~~ka~~~~G  209 (499)
                      .+|+++++|++.         .+|++++|    +|+++++.+..+..       |. .+.+|++|..+|.+....+.+.|
T Consensus       574 r~~la~i~g~~~---------v~f~pnaga~ge~a~~~vi~~~~~~~-------Gd~~r~~vli~~~aH~sn~a~a~~~G  637 (993)
T PLN02414        574 GDLLCEITGFDS---------FSLQPNAGAAGEYAGLMVIRAYHLSR-------GDHHRNVCIIPVSAHGTNPASAAMCG  637 (993)
T ss_pred             HHHHHHHhCCCe---------EEEcCCCcHHHHHHHHHHHHHHHhcc-------CCCCCCEEEeCCCcCccCHHHHHHCC
Confidence            999999999943         38888888    77777777663221       11 34589999999999999999999


Q ss_pred             CCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchh
Q 010842          210 VSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSA  289 (499)
Q Consensus       210 ~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~  289 (499)
                      +   +++.||++++|  .+|+++|+++|++.+.   ...+|++|+++|..|.++|+++|+++||++|+.++||||+..+.
T Consensus       638 ~---~vv~v~~d~~G--~vDle~L~~~i~~~~~---~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~  709 (993)
T PLN02414        638 M---KIVVVGTDAKG--NINIEELRKAAEAHKD---NLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQ  709 (993)
T ss_pred             C---EEEEeccCCCC--CcCHHHHHHHHhccCC---CeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhc
Confidence            9   99999998765  9999999999985321   23489999999999999999999999999999999999986654


Q ss_pred             ccCccchhhhcCCCCCceeEecccccccCCCc-----ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCC
Q 010842          290 CICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-----CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGT  364 (499)
Q Consensus       290 ~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-----~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~  364 (499)
                      .....     .+--++|+++++.|||++.|.|     +|+++++..  +.   ..-|........   +.......+..+
T Consensus       710 ~~l~~-----p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~--L~---p~lPg~~v~~~~---~~~~r~~~s~iG  776 (993)
T PLN02414        710 VGLTS-----PGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LA---PFLPSHPVVPTG---GIPRPEKTQPLG  776 (993)
T ss_pred             cCcCC-----ccccCCCEEEecCCccCCcCcccCCCCeeeEEEchh--hc---ccCCCCccccCC---CcccccCCCCcC
Confidence            22111     1112499999999999987765     999998873  21   222333221111   000000111123


Q ss_pred             CCCC-------CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCceEEEEEecCCCCCCcchh
Q 010842          365 GRRF-------KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFALVCFRLNPYPHSGSADT  435 (499)
Q Consensus       365 sr~~-------~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v~f~~~~~~~~~~~~~  435 (499)
                      ++..       .++..|..++.+|.+|+++..++...+++|++++|++..++....+  +.++.+.+.+.+.......  
T Consensus       777 t~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~--  854 (993)
T PLN02414        777 TISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFKNTAGI--  854 (993)
T ss_pred             CccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccccccCC--
Confidence            3332       2356788899999999999999999999999999987544433322  3445555555421100001  


Q ss_pred             HHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          436 EMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       436 ~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                        ....+.++|.+.|..... ..+.....+|++.+ ...+++|||+++++|+.+..++.+
T Consensus       855 --~~~di~krL~d~Gihapt-~~~pv~~~lmiepT-E~~skeelDrf~~al~~i~~e~~~  910 (993)
T PLN02414        855 --EPEDVAKRLMDYGFHAPT-MSWPVPGTLMIEPT-ESESKAELDRFCDALISIREEIAD  910 (993)
T ss_pred             --CHHHHHHHHHHcCcEEee-eccccCCEEEEEee-eeCCHHHHHHHHHHHHHHHHHHHH
Confidence              125577778877854322 22334667999995 999999999999999999887753

>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue

Probab=99.95  E-value=2.1e-26  Score=232.77  Aligned_cols=319  Identities=18%  Similarity=0.157  Sum_probs=223.8

Q ss_pred             ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842          120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS  199 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~  199 (499)
                      .+..+....++-+++.+.+++++|.+++.      ..++++|+|+|+..++...+... +       ++..|+++...|+
T Consensus        34 ~~~~~~~~~~~~~~~r~~la~~lg~~~~~------~v~~~~~~t~a~~~~~~~l~~~~-~-------~g~~vl~~~~~~~   99 (371)
T PF00266_consen   34 VSHRSREFAEILEEAREALAKLLGAPPDE------EVVFTSNGTEALNAVASSLLNPL-K-------PGDEVLVTSNEHP   99 (371)
T ss_dssp             SSTTSHHHHHHHHHHHHHHHHHHTSSTTE------EEEEESSHHHHHHHHHHHHHHHG-T-------TTCEEEEEESSHH
T ss_pred             ccchhhhhhHHHHHHHHHHHHhcCCcccc------ccccccccchhhhhhhhcccccc-c-------ccccccccccccc
Confidence            34445566777778889999999998721      45899999998877777764321 1       4667888999999


Q ss_pred             hHH----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh
Q 010842          200 TFA----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY  275 (499)
Q Consensus       200 s~~----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~  275 (499)
                      +..    ..++..|+   +++.+|.+.++  .+|+++++++|.++++      +|++++.+|.+|.+.|+++|+++||++
T Consensus       100 s~~~~~~~~~~~~g~---~v~~i~~~~~~--~~~~~~~~~~l~~~~~------lv~~~~~~~~tG~~~pi~~I~~~~~~~  168 (371)
T PF00266_consen  100 SNRYPWEEIAKRKGA---EVRVIPADPGG--SLDLEDLEEALNPDTR------LVSISHVENSTGVRNPIEEIAKLAHEY  168 (371)
T ss_dssp             HHHHHHHHHHHHTTE---EEEEEEEGTTS--SCSHHHHHHHHHTTES------EEEEESBETTTTBBSSHHHHHHHHHHT
T ss_pred             ccccccccccccchh---hhccccccccc--hhhhhhhhhhhccccc------eEEeecccccccEEeeeceehhhhhcc
Confidence            866    44456789   99999998765  8999999999975544      899999999999999999999999999


Q ss_pred             CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCC-CCCc
Q 010842          276 GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSE-SNSV  354 (499)
Q Consensus       276 ~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~-~~~~  354 (499)
                      |++++||++++.+....+--     . -++|.+++++|| +++|.|+|+++++++. +.+.......+-...... ....
T Consensus       169 ~~~~~vD~~~~~g~~~id~~-----~-~~~D~~~~s~~K-l~gp~G~g~l~v~~~~-~~~~~p~~~~~~~~~~~~~~~~~  240 (371)
T PF00266_consen  169 GALLVVDAAQSAGCVPIDLD-----E-LGADFLVFSSHK-LGGPPGLGFLYVRPEA-IERLRPAKPGGGYLDFPSLQEYG  240 (371)
T ss_dssp             TSEEEEE-TTTTTTSS--TT-----T-TTESEEEEESTS-TTSSSTEEEEEEEHHH-HHHHHTSSSSSSTTTHHHHHHHC
T ss_pred             CCceeEechhcccccccccc-----c-cccceeeecccc-cCCCCchhhheehhhh-hhccccccccccccccccchhcc
Confidence            99999999998876644311     1 148999999999 8889999999999864 222211111111000000 0000


Q ss_pred             ccCCCcccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC----CCceEEEEEecCCC
Q 010842          355 VDFKDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP----RHFALVCFRLNPYP  428 (499)
Q Consensus       355 ~~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~----~~~~~v~f~~~~~~  428 (499)
                      .....+.++.|...  ..+.+..+++.+...|++++.++..++++++.+.|+++++++++.+    ...++++|.+.+..
T Consensus       241 ~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~  320 (371)
T PF00266_consen  241 LADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGSD  320 (371)
T ss_dssp             HHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTSS
T ss_pred             cccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCCC
Confidence            00011112222221  1245566777777789999999999999999999999999998652    34678999886543


Q ss_pred             CCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--------CEEEEEEeccCCCCcHHHHHHH
Q 010842          429 HSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--------GLYMLRFAVGASLTDERHVVAA  482 (499)
Q Consensus       429 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--------g~~~lRi~~~~~~~t~~di~~l  482 (499)
                                .+.+.+.|.++|+.+..+....        -..++|+|+ ++++|++|||+|
T Consensus       321 ----------~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~-~~~nt~~dv~~l  371 (371)
T PF00266_consen  321 ----------ADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVIRVSL-HYYNTEEDVDRL  371 (371)
T ss_dssp             ----------HHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEEEEE--GTTSSHHHHHHH
T ss_pred             ----------HHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEEEEec-cCCCCHHHHhhC
Confidence                      3667777888875443321111        126799998 699999999986

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....

>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional

Probab=99.95  E-value=4.4e-25  Score=223.94  Aligned_cols=314  Identities=15%  Similarity=0.124  Sum_probs=212.9

Q ss_pred             HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCC
Q 010842          131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGV  210 (499)
Q Consensus       131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~  210 (499)
                      ..++.+.+++++|.+..         ++++|+|+||..++.+...           ++..|+++...|++...+++..|+
T Consensus        65 ~~~l~~~lA~~~g~~~~---------~~~~g~t~a~~~al~~l~~-----------~gd~Vlv~~~~h~s~~~~~~~~G~  124 (387)
T PRK09331         65 IADFHEDLAEFLGMDEA---------RVTHGAREGKFAVMHSLCK-----------KGDYVVLDGLAHYTSYVAAERAGL  124 (387)
T ss_pred             HHHHHHHHHHHhCCCcE---------EEeCCHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHHHHHHHcCC
Confidence            44445559999998653         8899999999888876632           566788999999999999999999


Q ss_pred             CCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH-cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchh
Q 010842          211 SPANIRALPTSVDANFSLSPQLLRRAVEADVE-AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSA  289 (499)
Q Consensus       211 g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~-~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~  289 (499)
                         +++.+|++.+.++.+|+++|++++++..+ .+..+.+|+++++++++|.+.|+++|+++|+++|+++|||+||+.+.
T Consensus       125 ---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~  201 (387)
T PRK09331        125 ---NVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGR  201 (387)
T ss_pred             ---EEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCC
Confidence               99999983222468999999999976422 22346789999999999999999999999999999999999998764


Q ss_pred             ccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC-C
Q 010842          290 CICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR-F  368 (499)
Q Consensus       290 ~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~  368 (499)
                      +..+-. .  .   ++|.+++++|||++.|.+.|+++++++ .+.........|.....       .    .+..+.+ .
T Consensus       202 ~~~~~~-~--~---g~D~~~~s~~K~l~~~~~~G~l~~~~~-~i~~~~~~~~~~~~~~~-------~----~~~~~~~~~  263 (387)
T PRK09331        202 MPVDGK-K--L---GADFIVGSGHKSMAASAPSGVLATTEE-YADKVFRTSRKFGVKEV-------E----LLGCTLRGA  263 (387)
T ss_pred             cCCCHH-H--c---CCCEEEeeCcccccCCCCEEEEEECHH-HHhhcccccCCCcccce-------e----eeceecCch
Confidence            432211 1  1   489999999999999999999888653 23222222222221100       0    0111111 1


Q ss_pred             CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCceEEEEEecCCCCCCcchhHHHHHHHHHHH
Q 010842          369 KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFALVCFRLNPYPHSGSADTEMLNRKLLDWV  446 (499)
Q Consensus       369 ~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l  446 (499)
                      .+..+++++..+- +. .+..++..++++++++.|++++|++++.+  ...+++.+...... ...........++.+.|
T Consensus       264 ~~~~~~aal~~~~-~~-~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~L  340 (387)
T PRK09331        264 PLVTLMASFPHVV-ER-VKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFD-EIAKKHKRRGFFLYEEL  340 (387)
T ss_pred             HHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchh-HHhhhccccchhHHHHH
Confidence            2344445554431 11 23566778899999999999999998852  23455555543110 00000011124578888


Q ss_pred             HhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          447 NSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       447 ~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .++|+..+.   .....++|+..+  ..|++|+++++++|+++.+++
T Consensus       341 ~~~gI~~~~---~~~~~i~ri~~~--g~t~~di~~l~~aL~~i~~~~  382 (387)
T PRK09331        341 KKRGIHGIK---PGATKEFKLSTY--GLTWEQVEYVADAFKEIAEKY  382 (387)
T ss_pred             HHcCceEEc---cCCceEEEEEec--cCCHHHHHHHHHHHHHHHHhc
Confidence            888864222   223455777664  368999999999999987764

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.95  E-value=1.9e-25  Score=238.05  Aligned_cols=388  Identities=13%  Similarity=0.034  Sum_probs=260.2

Q ss_pred             CCCCC--CCCCHHHHHHHHHhhhcCCCCCCCCcccccc-----CCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHH
Q 010842           60 DSAPH--RPESFETILKDVQEKIIPGITHWLSPNFFAF-----FPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEI  132 (499)
Q Consensus        60 ~~~p~--~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~  132 (499)
                      ...|.  .+.++.++++.+.++-.++..-..+..|+|-     .+..-..|+...++.+.  .+.+. .+.+.+.-++-.
T Consensus       470 ~~~p~f~~~~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~~~~p~s~~eF~t~--hPyqp-~e~sQG~lq~i~  546 (954)
T PRK12566        470 LQHPVFNAHHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWPEFAQL--HPFAP-REQAEGYRAMID  546 (954)
T ss_pred             ccCcccccCCCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHHhhhcccchhhhcC--CCCCc-hhhhcCHHHHHH
Confidence            34453  4679999999999988887665556677775     44444455556666655  33322 244555555656


Q ss_pred             HHHHHHHHHcCCCCccccCCCccEEEc-CChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCCchhHHHHHHHhCC
Q 010842          133 VVMDWLATMLKLPKTFMFSGTGGGVIQ-NTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHSTFAKVCKLAGV  210 (499)
Q Consensus       133 ~~~~~la~l~g~~~~~~~~~~~~g~~t-~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~H~s~~ka~~~~G~  210 (499)
                      ++.+|+++++|++..         .+. ++|+++++.++++.|.....+    |. .+.+|++|...|.+....+...|+
T Consensus       547 elq~~l~eLtGmd~~---------Sl~p~sGA~gE~A~Lmair~yh~~~----Ge~~r~~vLIp~saHgtNpasa~~~Gi  613 (954)
T PRK12566        547 ELEAWLCAITGFDAI---------CMQPNSGAQGEYAGLLAIRRYHRSR----GQSQRDICLIPSSAHGTNPASAQMAGM  613 (954)
T ss_pred             HHHHHHHHHHCCCeE---------eecCCchHHHHHHHHHHHHHHHHhc----CCCCCCEEEecccccccCHHHHHHCCC
Confidence            666999999999875         444 478889988888877543322    22 356788999999887777888999


Q ss_pred             CCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhc
Q 010842          211 SPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSAC  290 (499)
Q Consensus       211 g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~  290 (499)
                         +++.||+|++|  .+|+++|+++|++..   ....+|+++++++..+..+|+++|+++||++|+++++|||+.....
T Consensus       614 ---eVv~Vp~D~~G--~iDle~L~a~I~~~~---~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~  685 (954)
T PRK12566        614 ---RVVIVECDPDG--NVDLDDLKAKAAAAG---DRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQV  685 (954)
T ss_pred             ---EEEEeccCCCC--CcCHHHHHHHhhccC---CCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhcc
Confidence               99999998765  999999999997321   2345788899988776668899999999999999999999864333


Q ss_pred             cCccchhhhcCCCCCceeEecccccccCCCcceEEEEeC---chhHHHhhcCCccCCCCCC-CCCCCcccCCCcccCCCC
Q 010842          291 ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQ---PGLLVKALSTDPEYLKNKP-SESNSVVDFKDWQVGTGR  366 (499)
Q Consensus       291 ~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~---~~~l~~~~~~~~~yl~~~~-~~~~~~~~~~~~~~~~sr  366 (499)
                      ..+..     +--++|++++++|||++.|.|.|..++..   ++.+.       +|+.+.. .+..+.. ....+....-
T Consensus       686 ~l~~P-----g~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~-------pfLp~~P~~d~~G~~-~r~ga~S~~~  752 (954)
T PRK12566        686 GLARP-----ADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLA-------PFVANHPVVPVEGPD-PNNGAVSAAP  752 (954)
T ss_pred             CCCCh-----hhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhh-------hhccCCCCcCCCCCC-CCCCceeecc
Confidence            22211     11259999999999999999988887765   22222       2332211 0000000 0000000000


Q ss_pred             CCC---cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC----CCceEEEEEecCCCCCCcchhHHHH
Q 010842          367 RFK---SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP----RHFALVCFRLNPYPHSGSADTEMLN  439 (499)
Q Consensus       367 ~~~---al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~~~~~~~~  439 (499)
                      ...   ++..|..++.+|.+ +.+.......+++|+.++|.+.  +++...    +.++.+.+...+.......+    .
T Consensus       753 ~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~--~~v~~~~~~~~~~hEfii~~~~l~~~~g~~----~  825 (954)
T PRK12566        753 WGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGA--FPVLYRGRNERVAHECILDLRPLKAQTGIS----E  825 (954)
T ss_pred             cchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhh--CCCCcCCCCCCeeeEEEEEccccccccCCC----H
Confidence            112   46788889999998 8888888899999999999874  433322    22344445444211000011    2


Q ss_pred             HHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          440 RKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       440 ~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ..+.++|.+.|..... ..+.....+|++.+ ...+++|||+++++|+++.+++
T Consensus       826 ~dvakRL~d~Gihapt-~~fPv~~~LmIepT-E~eskeEIDrf~eAL~~I~~e~  877 (954)
T PRK12566        826 EDVAKRLMDYGFHAPT-MSFPVPGTLMVEPT-ESESKAELDRFVEAMLSIRAEI  877 (954)
T ss_pred             HHHHHHHHHCCcEEeE-EeeccCCEEEEEee-eeCCHHHHHHHHHHHHHHHHHH
Confidence            4577777777753322 23344667999995 9999999999999999998875

>PRK02948 cysteine desulfurase; Provisional

Probab=99.95  E-value=1.7e-25  Score=226.99  Aligned_cols=317  Identities=12%  Similarity=0.126  Sum_probs=217.3

Q ss_pred             ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842          120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS  199 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~  199 (499)
                      .+..+.....+.+++++.+++++|.+++       ..++++|+|+++..++.+.......       ++.+|+++...|+
T Consensus        34 ~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~i~~~~g~t~a~~~~~~~~~~~~~~-------~g~~vv~~~~~h~   99 (381)
T PRK02948         34 LHDIGGTASSLLQVCRKTFAEMIGGEEQ-------GIYFTSGGTESNYLAIQSLLNALPQ-------NKKHIITTPMEHA   99 (381)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCcHHHHHHHHHHHHHHhccC-------CCCEEEECCcccH
Confidence            3444555667788889999999998654       3588999999998888776532111       3567888999999


Q ss_pred             hHHHHH---HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC
Q 010842          200 TFAKVC---KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG  276 (499)
Q Consensus       200 s~~ka~---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~  276 (499)
                      ++....   +..|+   +++.+|++++  +.+|+++|++.+.++      +.+|++++++|+||.+.|+++|.++|+++|
T Consensus       100 s~~~~~~~~~~~g~---~v~~v~~~~~--~~~d~~~l~~~l~~~------~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~  168 (381)
T PRK02948        100 SIHSYFQSLESQGY---TVTEIPVDKS--GLIRLVDLERAITPD------TVLASIQHANSEIGTIQPIAEIGALLKKYN  168 (381)
T ss_pred             HHHHHHHHHHhCCC---EEEEEeeCCC--CCCCHHHHHHhcCCC------CEEEEEECCcCCcEeehhHHHHHHHHHHcC
Confidence            876654   45577   9999998754  489999999988653      348999999999999999999999999999


Q ss_pred             CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          277 IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       277 ~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      +++|||++++.+....+     ... ..+|++++++||+++ |.|+|+++++++..+.      + .......       
T Consensus       169 ~~vivD~~~~~g~~~~~-----~~~-~~~d~~~~s~~K~~g-p~G~G~l~~~~~~~~~------~-~~~~~~~-------  227 (381)
T PRK02948        169 VLFHSDCVQTFGKLPID-----VFE-MGIDSLSVSAHKIYG-PKGVGAVYINPQVRWK------P-VFPGTTH-------  227 (381)
T ss_pred             CEEEEEChhhccccccC-----ccc-CCCCEEEecHHhcCC-CCcEEEEEEcCCCCCC------C-cccCCCC-------
Confidence            99999988765432221     111 148999999999765 8899999987642110      0 0000000       


Q ss_pred             CCCcccCCC-CCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc--CCC---ceEEEEEecCCCC
Q 010842          357 FKDWQVGTG-RRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV--PRH---FALVCFRLNPYPH  429 (499)
Q Consensus       357 ~~~~~~~~s-r~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~---~~~v~f~~~~~~~  429 (499)
                        ...++.+ -.. ....+..+++.+ .+++++..++..++++++.+.|+++ ++++..  .+.   ..++.|...... 
T Consensus       228 --~~~~~~~t~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~~~~~~i~~~~~~~~~-  302 (381)
T PRK02948        228 --EKGFRPGTVNVPGIAAFLTAAENI-LKNMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHSTSCLPHIIGVTIKGIE-  302 (381)
T ss_pred             --CCCcCCCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCccCcCCEEEEEeCCCC-
Confidence              0001111 111 123334444433 2567888899999999999999988 554432  121   235666654322 


Q ss_pred             CCcchhHHHHHHHHHHHHhcCCEEEEeee----E---------------CCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          430 SGSADTEMLNRKLLDWVNSTGRVYLTHTI----V---------------GGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       430 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~----~---------------~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                               ..++...|.++|+.+-.+..    +               ....++|++++ +.+|++|+++++++|+++.
T Consensus       303 ---------~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~-~~~t~~di~~l~~~l~~~~  372 (381)
T PRK02948        303 ---------GQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFG-QQTTKDQIDTTIHALETIG  372 (381)
T ss_pred             ---------HHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcC-CCCCHHHHHHHHHHHHHHH
Confidence                     34456667677754432221    1               12468999995 8999999999999999999


Q ss_pred             HHHhccC
Q 010842          491 DRLFKGS  497 (499)
Q Consensus       491 ~~l~~~~  497 (499)
                      +.+.+.-
T Consensus       373 ~~~~~~~  379 (381)
T PRK02948        373 NQFYRGV  379 (381)
T ss_pred             HHHhccc
Confidence            8887653

>PLN02409 serine--glyoxylate aminotransaminase

Probab=99.95  E-value=1.2e-25  Score=228.84  Aligned_cols=350  Identities=11%  Similarity=0.019  Sum_probs=238.1

Q ss_pred             ccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHH
Q 010842           92 FFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLI  171 (499)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~  171 (499)
                      .+-+.|++...+..+.+.+...+..    + .++...++.+++.+++++++|.+...      ..+++++||.++..++.
T Consensus        10 ~~l~~pGP~~~~~~V~~a~~~~~~~----~-~~~~~~~~~~~~~~~l~~~~g~~~~~------~vi~~~~gt~a~~~a~~   78 (401)
T PLN02409         10 NHLFVPGPVNIPERVLRAMNRPNED----H-RSPAFPALTKELLEDVKYIFKTKSGT------PFIFPTTGTGAWESALT   78 (401)
T ss_pred             ceeccCCCCCCCHHHHHHhcCCCCC----C-CCHHHHHHHHHHHHHHHHHhCCCCCC------EEEEeCCcHHHHHHHHH
Confidence            3446677777766666665443322    1 36778889999999999999996431      35888899988776665


Q ss_pred             HHHHHHHhHhhhhccCCeEEEcCCCCchhH--HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEE
Q 010842          172 AARDRALDAVGAENMHKLVVYGSDQTHSTF--AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLF  249 (499)
Q Consensus       172 ~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~--~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~  249 (499)
                      ...+           ++..|+++...|++.  ...++..|+   +++.++.+.++  .+|+++|++++++++.  .++.+
T Consensus        79 ~~~~-----------~Gd~Vlv~~~~~~~~~~~~~~~~~g~---~v~~v~~~~~~--~~~~~~l~~~l~~~~~--~~~k~  140 (401)
T PLN02409         79 NTLS-----------PGDKVVSFRIGQFSLLWIDQMQRLNF---DVDVVESPWGQ--GADLDILKSKLRQDTN--HKIKA  140 (401)
T ss_pred             hcCC-----------CCCEEEEeCCCchhHHHHHHHHHcCC---ceEEEECCCCC--CCCHHHHHHHHhhCcC--CCccE
Confidence            4321           466788888889764  577888899   99999987643  5899999999986320  12448


Q ss_pred             EEEecCCCcccccCChhHHHHH--HHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEE
Q 010842          250 LCATVGTTSTTAVDNVEPLAEV--ANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWV  327 (499)
Q Consensus       250 vv~t~gtt~~G~id~l~~I~~i--a~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~  327 (499)
                      |++++++|+||.+.|+++|+++  |+++|++++||++++.+....+-     ..+ ++|.+++++|||+++|.|+|++++
T Consensus       141 v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~-----~~~-~~D~~~~s~~K~l~~P~G~G~l~~  214 (401)
T PLN02409        141 VCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRM-----DEW-GVDVALTGSQKALSLPTGLGIVCA  214 (401)
T ss_pred             EEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccc-----ccc-CccEEEEcCccccCcCCCcceeEE
Confidence            8999999999999999999999  99999999999998754432211     111 489999999999999999999998


Q ss_pred             eCchhHHHhhcC--CccCCCCCCCCCCCcccCCCcc-c-CCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010842          328 KQPGLLVKALST--DPEYLKNKPSESNSVVDFKDWQ-V-GTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGF  402 (499)
Q Consensus       328 r~~~~l~~~~~~--~~~yl~~~~~~~~~~~~~~~~~-~-~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~  402 (499)
                      +++. +.+....  .+.|+....     ..++...+ . ..+... ....+..+++.+...|++++.++..++++++.+.
T Consensus       215 ~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~  288 (401)
T PLN02409        215 SPKA-LEASKTAKSPRVFFDWAD-----YLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLA  288 (401)
T ss_pred             CHHH-HHHHhcCCCCCeecCHHH-----HHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence            7653 3222211  112221000     00000000 0 001111 1234555666666789999999999999999999


Q ss_pred             HhcCCCeEEEcCC---Cc-eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-CEEEEEEeccCCCCcHH
Q 010842          403 VKSDPRFEIVVPR---HF-ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-GLYMLRFAVGASLTDER  477 (499)
Q Consensus       403 L~~~~~~~~~~~~---~~-~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lRi~~~~~~~t~~  477 (499)
                      |++. +++++.+.   .. .+++|++...-       +  ..++.+.+.++..+.+.++... ...++|++.+ .+++++
T Consensus       289 L~~~-g~~~~~~~~~~~s~~v~~~~~p~~~-------~--~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~-g~~~~~  357 (401)
T PLN02409        289 VEAW-GLKLCTKKPEWRSDTVTAVVVPEGI-------D--SAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHL-GNVNEL  357 (401)
T ss_pred             HHHc-CCeeccCChhhcccceEEEeCCCCC-------C--HHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCC-CCCCHH
Confidence            9987 89988642   23 34556654211       1  2456666654444455544322 2357999998 578999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010842          478 HVVAAWELIMEGADRL  493 (499)
Q Consensus       478 di~~l~~~l~~~~~~l  493 (499)
                      |+..++++|.++..++
T Consensus       358 ~~~~~~~~~~~~l~~~  373 (401)
T PLN02409        358 QLLGALAGVEMVLKDV  373 (401)
T ss_pred             HHHHHHHHHHHHHHHc
Confidence            9999999999987764

>PRK14012 cysteine desulfurase; Provisional

Probab=99.95  E-value=8e-25  Score=223.62  Aligned_cols=303  Identities=16%  Similarity=0.153  Sum_probs=204.2

Q ss_pred             HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH--
Q 010842          130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL--  207 (499)
Q Consensus       130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~--  207 (499)
                      .-+++.+++++++|.+.+       ..++++|||+|+..++.+......+       ++..|+++..+|+++..+++.  
T Consensus        50 ~~~~~r~~ia~~~g~~~~-------~v~~~~g~t~al~~~l~~l~~~~~~-------~gd~Vi~~~~~~~s~~~~~~~~~  115 (404)
T PRK14012         50 AVDIARNQIADLIGADPR-------EIVFTSGATESDNLAIKGAAHFYQK-------KGKHIITSKTEHKAVLDTCRQLE  115 (404)
T ss_pred             HHHHHHHHHHHHcCcCcC-------eEEEeCCHHHHHHHHHHHHHHhhcC-------CCCEEEEecCccHHHHHHHHHHH
Confidence            344567789999998754       3689999999999888766432111       456788999999998766654  


Q ss_pred             -hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842          208 -AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA  286 (499)
Q Consensus       208 -~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g  286 (499)
                       .|+   +++.|+++++  +.+|+++|+++|++++      .+|++++.+|++|.+.|+++|.++|+++|+++|+|+|++
T Consensus       116 ~~g~---~~~~v~~~~~--g~~d~~~l~~~i~~~t------~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~  184 (404)
T PRK14012        116 REGF---EVTYLDPQSN--GIIDLEKLEAAMRDDT------ILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQS  184 (404)
T ss_pred             hCCC---EEEEEccCCC--CcCCHHHHHHhcCCCC------EEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchh
Confidence             488   9999998854  5899999999997654      389999999999999999999999999999999999998


Q ss_pred             chhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCC
Q 010842          287 GSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR  366 (499)
Q Consensus       287 ~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr  366 (499)
                      .+....+- .    . ..+|++++++||++ +|.|+|+++++++...    ...+.+ .+....         ..++.+.
T Consensus       185 ~g~~~~~~-~----~-~~~D~~~~s~~K~~-gp~g~G~l~~~~~~~~----~~~~~~-~g~~~~---------~~~~~gt  243 (404)
T PRK14012        185 VGKVPIDL-S----K-LKVDLMSFSAHKIY-GPKGIGALYVRRKPRV----RLEAQM-HGGGHE---------RGMRSGT  243 (404)
T ss_pred             cCCcccCc-c----c-CCCCEEEEehhhcc-CCCceEEEEEecCCCC----CCCcee-cCCCcc---------CCccCCC
Confidence            76543221 1    1 14899999999955 5789999999875321    111111 111000         0011111


Q ss_pred             C-C-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----CceEEEEEecCCCCCCcchhHHHH
Q 010842          367 R-F-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----HFALVCFRLNPYPHSGSADTEMLN  439 (499)
Q Consensus       367 ~-~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----~~~~v~f~~~~~~~~~~~~~~~~~  439 (499)
                      . . ..+.+-.++... ..++.++.++..++++++.+.|++++++.++.++     ....++|...+            .
T Consensus       244 ~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~------------~  310 (404)
T PRK14012        244 LPTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVE------------G  310 (404)
T ss_pred             cCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcC------------H
Confidence            1 1 112222333333 3456778889999999999999999998876431     12234444422            1


Q ss_pred             HHHHHHHHh----cCCEEEEeee---------E-----CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          440 RKLLDWVNS----TGRVYLTHTI---------V-----GGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       440 ~~l~~~l~~----~g~~~~~~~~---------~-----~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ..+...|..    .|..+ .+..         +     .....+|+++ ++.+|++|||+++++|+++.+.+
T Consensus       311 ~~~~~~l~~~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~iRls~-~~~~t~~dvd~~~~~l~~~~~~~  380 (404)
T PRK14012        311 ESLIMALKDLAVSSGSAC-TSASLEPSYVLRALGLNDELAHSSIRFSL-GRFTTEEEIDYAIELVRKSIGKL  380 (404)
T ss_pred             HHHHHhCCCeEEEchhhh-CCCCCCCCHHHHHcCCChhhcCceEEEEe-cCCCCHHHHHHHHHHHHHHHHHH
Confidence            223333321    12111 1110         0     1136799999 58899999999999999988765

>TIGR01814 kynureninase kynureninase

Probab=99.94  E-value=1.1e-24  Score=222.80  Aligned_cols=353  Identities=11%  Similarity=0.060  Sum_probs=223.4

Q ss_pred             CccccccCCCCCChHHHHHHHHHHHcc----cCCcccccC-hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH
Q 010842           89 SPNFFAFFPATVSTAGFLGEMLCACFN----SVGFNWLAS-PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS  163 (499)
Q Consensus        89 ~p~~~~~~~~~~~~~~~~~~~l~~~~n----~~~~~~~~~-p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt  163 (499)
                      +..||.+...++. |..+.+.+..+++    +....|..+ .....++.+..+ + +++|.+++       ..++|+|+|
T Consensus        27 ~~iyld~~a~g~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~-------~v~~~~~~t   96 (406)
T TIGR01814        27 AVIYLDGNSLGLM-PKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKED-------EVVVMNTLT   96 (406)
T ss_pred             CcEEecCCCcCcC-cHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCC-------cEEEeCCch
Confidence            3467776655554 5555555554432    222122221 122334444333 5 88998654       358999999


Q ss_pred             HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH----HHHHhCCCCCCe----EEeeCCCCCCCccCHHHHHH
Q 010842          164 DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK----VCKLAGVSPANI----RALPTSVDANFSLSPQLLRR  235 (499)
Q Consensus       164 ~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k----a~~~~G~g~~~v----~~v~~~~~~~~~~d~~~L~~  235 (499)
                      +++..++......        +.++.+|+++...|.|...    .++..|+   ++    +.++.+.+  +.+|++++++
T Consensus        97 ~~l~~~~~~~~~~--------~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~---~~~~~~~~~~~~~~--g~~~~~~l~~  163 (406)
T TIGR01814        97 INLHLLLASFYKP--------TPKRYKILLEAKAFPSDHYAIESQLQLHGL---TVEESMVQIEPREE--ETLRLEDILD  163 (406)
T ss_pred             HHHHHHHHHhcCC--------cCCccEEEecCCCCChHHHHHHHHHHhcCC---CcccceEEeccCCC--CccCHHHHHH
Confidence            9877766553110        1123468888899988444    4456687   76    45665543  4889999999


Q ss_pred             HHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccccc
Q 010842          236 AVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKW  315 (499)
Q Consensus       236 ~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~  315 (499)
                      .++..   ..++.+|++++.++.+|.+.|+++|+++||++|++++||++++.+....+-     .. .++|.+++++|||
T Consensus       164 ~~~~~---~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~-----~~-~gvD~~~~s~hK~  234 (406)
T TIGR01814       164 TIEKN---GDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDL-----HD-WGVDFACWCTYKY  234 (406)
T ss_pred             HHHhc---CCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCccccc-----cc-CCCCEEEEcCccc
Confidence            88642   123458999999999999999999999999999999999999887654321     11 1489999999999


Q ss_pred             ccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCC-CC--CcccCCCcccCCCCC-C-CcHHHHHHHHHhcHHHHHHHHH
Q 010842          316 LLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSE-SN--SVVDFKDWQVGTGRR-F-KSLRLWMVLRSYGVLNLQSHIR  390 (499)
Q Consensus       316 l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~-~~--~~~~~~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~  390 (499)
                      ++.|.| |+++++.+... ........|....... ..  .........++.+.+ . ....+..+++.+...|++++.+
T Consensus       235 l~g~pG-~~l~v~~~~~~-~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~  312 (406)
T TIGR01814       235 LNAGPG-AGAFVHEKHAH-TERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRK  312 (406)
T ss_pred             cCCCCC-eEEEEehhhhh-hcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHH
Confidence            976767 66666554321 1111111221111000 00  000000111112211 1 1234555666666678889999


Q ss_pred             HHHHHHHHHHHHHhcC----CCeEEEcCC----CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCE
Q 010842          391 SDIRLAKMFEGFVKSD----PRFEIVVPR----HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGL  462 (499)
Q Consensus       391 ~~~~~a~~l~~~L~~~----~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~  462 (499)
                      +..++++++.+.|++.    ++++++.+.    ..++++|.+. ..          .+.+.++|.++|++ +.   ..+.
T Consensus       313 ~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~~----------~~~~~~~L~~~gi~-v~---~~~~  377 (406)
T TIGR01814       313 KSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-VP----------GKAVFQALIKRGVI-GD---KREP  377 (406)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-CC----------HHHHHHHHHHCCEE-Ee---ccCC
Confidence            9999999999999875    468888642    2457888775 22          35677778777853 32   2233


Q ss_pred             EEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          463 YMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       463 ~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      ..+|+|+++.++|++||++++++|+++.
T Consensus       378 ~~iRiS~~~~~nt~~did~l~~~l~~~~  405 (406)
T TIGR01814       378 SVIRVAPVPLYNTFVDVYDAVNVLEEIL  405 (406)
T ss_pred             CeEEEechhccCCHHHHHHHHHHHHHHh
Confidence            5799999667899999999999998763

This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.

>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily

Probab=99.94  E-value=1.5e-24  Score=221.45  Aligned_cols=340  Identities=13%  Similarity=0.112  Sum_probs=223.8

Q ss_pred             cccccCCCCCChHHHHHHHHHHHcccC----CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHH
Q 010842           91 NFFAFFPATVSTAGFLGEMLCACFNSV----GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSI  166 (499)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~~n~~----~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~  166 (499)
                      .|+.+-..++.++. +.+.+...+...    ...|..+....++.+++++.+++++|.+..       ..++++|+|+++
T Consensus        19 ~yl~~~~~~~~p~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~-------~v~~~~~~t~~l   90 (397)
T TIGR01976        19 VFFDNPAGTQIPQS-VADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPP-------EVVFGANATSLT   90 (397)
T ss_pred             EEecCCccCCCCHH-HHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCC-------eEEEeCCHHHHH
Confidence            57776544444444 444444443211    122333344556677888889999998654       358888999887


Q ss_pred             HHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH
Q 010842          167 LVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE  242 (499)
Q Consensus       167 ~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~  242 (499)
                      ...+.+.....        .++..|+++...|++..    ..++..|+   +++.++++++ ++.+|+++|++++.+++ 
T Consensus        91 ~~~~~~~~~~~--------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~i~~~~-  157 (397)
T TIGR01976        91 FLLSRAISRRW--------GPGDEVIVTRLDHEANISPWLQAAERAGA---KVKWARVDEA-TGELHPDDLASLLSPRT-  157 (397)
T ss_pred             HHHHHHHHhcC--------CCCCEEEEcCCchHhHHHHHHHHHHhcCC---EEEEEecccc-CCCcCHHHHHHhcCCCc-
Confidence            65554432110        14567888999998754    55677899   9999998753 36899999999987544 


Q ss_pred             cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842          243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC  322 (499)
Q Consensus       243 ~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~  322 (499)
                           .+|++++++|++|.+.|+++|+++|+++|+++++|++++.+....+ .    .. .++|.+++++|||++ | .+
T Consensus       158 -----~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~-~----~~-~~~d~~~~s~~K~~g-~-~~  224 (397)
T TIGR01976       158 -----RLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLID-V----QA-TGADFLTCSAYKFFG-P-HM  224 (397)
T ss_pred             -----eEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCC-H----HH-cCCCEEEEechhhcC-C-ce
Confidence                 3899999999999999999999999999999999999865432211 1    11 148999999999986 4 38


Q ss_pred             eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCC-CCCC-cHHHHHHHHHhcHH--------------HHH
Q 010842          323 CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTG-RRFK-SLRLWMVLRSYGVL--------------NLQ  386 (499)
Q Consensus       323 g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s-r~~~-al~~~~~l~~~g~~--------------g~~  386 (499)
                      |+++++++. +.........+.....          ...++.| +.+. .+.+..+++.+...              +++
T Consensus       225 G~l~~~~~~-~~~l~~~~~~~~~~~~----------~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~  293 (397)
T TIGR01976       225 GILWGRPEL-LMNLPPYKLTFSYDTG----------PERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQ  293 (397)
T ss_pred             EEEEEcHHH-HhhCCCccccCccCCC----------cchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHH
Confidence            888887542 2111111111111110          0011222 2222 34455566555322              367


Q ss_pred             HHHHHHHHHHHHHHHHHhcCCCeEEEcC----CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE---
Q 010842          387 SHIRSDIRLAKMFEGFVKSDPRFEIVVP----RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV---  459 (499)
Q Consensus       387 ~~~~~~~~~a~~l~~~L~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---  459 (499)
                      +..++..++++++.+.|+++++++++.+    +..+++.|......          ..++.++|.++|+.+-.....   
T Consensus       294 ~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~l~~~L~~~gI~v~~~~~~~~~  363 (397)
T TIGR01976       294 AIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGLP----------PQRVVRRLADQGIDAWAGHFYAVR  363 (397)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCcC----------HHHHHHHHHHCCeEEEeCccchHH
Confidence            7788888999999999999988998764    25677877764322          356778888888654332111   


Q ss_pred             --------CCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842          460 --------GGLYMLRFAVGASLTDERHVVAAWELI  486 (499)
Q Consensus       460 --------~g~~~lRi~~~~~~~t~~di~~l~~~l  486 (499)
                              ....++|+|++ +.+|++||++++++|
T Consensus       364 ~~~~~~~~~~~~~iRis~~-~~~t~~di~~l~~~l  397 (397)
T TIGR01976       364 LLRRLGLNDEGGVVRVGLA-HYNTAEEVDRLLEAL  397 (397)
T ss_pred             HHHHhCCCCCCCeEEEEee-ccCCHHHHHHHHHhC
Confidence                    12357999995 889999999999864

This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.

>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.94  E-value=5.5e-24  Score=214.30  Aligned_cols=312  Identities=15%  Similarity=0.140  Sum_probs=209.0

Q ss_pred             hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842          125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka  204 (499)
                      |...++|+.    +++++|.+ .        .++++|+|+++..++.+...           ++..|+++..+|++...+
T Consensus        44 ~~~~~l~~~----la~~~g~~-~--------i~~~~g~t~al~~~l~~~~~-----------~gd~Vl~~~~~~~~~~~~   99 (361)
T cd06452          44 PPIKDFHHD----LAEFLGMD-E--------ARVTPGAREGKFAVMHSLCE-----------KGDWVVVDGLAHYTSYVA   99 (361)
T ss_pred             chHHHHHHH----HHHHcCCc-e--------EEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCcchHHHHH
Confidence            444455555    99999983 2        48999999998887776532           466788899999999999


Q ss_pred             HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHc-CCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeec
Q 010842          205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEA-GLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDA  283 (499)
Q Consensus       205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~-g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~  283 (499)
                      ++..|+   +++.||++.+++|.+|+++|++++++..+. +..+.+|++++++|++|.+.|+++|+++|+++|+++|+|+
T Consensus       100 ~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~  176 (361)
T cd06452         100 AERAGL---NVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNG  176 (361)
T ss_pred             HHhcCC---EEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEEC
Confidence            999999   999999987655799999999999764322 2346688899999999999999999999999999999999


Q ss_pred             cccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcc-c
Q 010842          284 AYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQ-V  362 (499)
Q Consensus       284 A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~-~  362 (499)
                      ||+.+....+.   .  .. .+|.++.++||+++.|.++|+++++++ ...+..... .++...           ..+ .
T Consensus       177 a~~~g~~~~~~---~--~~-~~d~~~~s~~K~l~~~~~~G~l~~~~~-~~~~l~~~~-~~~~~~-----------~~~~~  237 (361)
T cd06452         177 AYTVGRMPVSG---K--EL-GADFIVGSGHKSMAASAPIGVLATTEE-WADIVFRTS-QMFKIK-----------EVELL  237 (361)
T ss_pred             CcccCCcCCCH---H--Hc-CCCEEEecCCccccCCCCeEEEEECHH-HHHHHhccc-cccccc-----------eeeee
Confidence            99754332111   1  11 379999999999998888998888653 332222222 111100           000 1


Q ss_pred             CCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc--CCCceEEEEEecCCCCCCcchhHHHH
Q 010842          363 GTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV--PRHFALVCFRLNPYPHSGSADTEMLN  439 (499)
Q Consensus       363 ~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~v~f~~~~~~~~~~~~~~~~~  439 (499)
                      ..+.+. .+..++.++..+ .+.+ +..++..++++++++.|+++|+++++.  +...+++.|+...... .........
T Consensus       238 ~~~~~~~~~~~~~~al~~~-~~~~-~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~-~~~~~~~~~  314 (361)
T cd06452         238 GCTLRGAPLVTLMASFPHV-KERV-KRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDE-IAKKHKRRG  314 (361)
T ss_pred             ccccCchHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcch-hhhhccccc
Confidence            111111 233444455433 2333 445555677899999999999999874  3345666666532100 000000012


Q ss_pred             HHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          440 RKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       440 ~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      .++.+.|.++|+...   ......++|++++  ..+++|++.++++|+++.
T Consensus       315 ~~~~~~L~~~gI~~~---~~~~~~~~ri~~~--g~~~e~~~~l~~al~~~~  360 (361)
T cd06452         315 YFLYSELKKRGIHGI---KPGLTRYFKLSTY--GLTWEQVEYVVDAFKEIA  360 (361)
T ss_pred             hhHHHHHHHcCceEE---cCCCceEEEEEec--CCCHHHHHHHHHHHHHHh
Confidence            257788888886521   1122347899884  268999999999998754

This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.

>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]

Probab=99.94  E-value=1.2e-24  Score=211.10  Aligned_cols=352  Identities=17%  Similarity=0.143  Sum_probs=222.3

Q ss_pred             CCCCccccccCCCCCChHHHHHHHH---HHHc-ccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCC
Q 010842           86 HWLSPNFFAFFPATVSTAGFLGEML---CACF-NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNT  161 (499)
Q Consensus        86 ~~~~p~~~~~~~~~~~~~~~~~~~l---~~~~-n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~g  161 (499)
                      +...|-|+.....++..|.++..+.   ..++ |++.. +.....-..+|. .++.+++++|.++.       +.+||+|
T Consensus        40 ~~~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~-~y~w~~~~~~E~-aR~~VAklInAd~~-------dIiFts~  110 (428)
T KOG1549|consen   40 HGTRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSR-SYGWKAEDAVEA-AREQVAKLINADPS-------DIVFTSG  110 (428)
T ss_pred             CCCccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCcc-ccchhhhHHHHH-HHHHHHHHhCCCCC-------cEEEeCC
Confidence            3457788888777777776665443   3333 33322 111122233444 57889999999876       4799999


Q ss_pred             hHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh---CCCCCCeEEeeCCCCCCCccCHHHHHHHHH
Q 010842          162 TSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA---GVSPANIRALPTSVDANFSLSPQLLRRAVE  238 (499)
Q Consensus       162 gt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~---G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~  238 (499)
                      +||||.+++...-.....     + .+-.|++...+|.++.++++.+   |+   .++.||+..+  +..|++.+++.|+
T Consensus       111 ATEs~Nlvl~~v~~~~~~-----~-~~k~iitl~~eH~~v~~s~~~l~~~g~---~Vt~lpv~~~--~~~d~~~~~~~i~  179 (428)
T KOG1549|consen  111 ATESNNLVLKGVARFFGD-----K-TKKHIITLQTEHPCVLDSCRALQEEGL---EVTYLPVEDS--GLVDISKLREAIR  179 (428)
T ss_pred             chHHHHHHHHHhhccccc-----c-ccceEEEecccCcchhHHHHHHHhcCe---EEEEeccCcc--ccccHHHHHHhcC
Confidence            999998887754321110     1 1227888899999999888765   77   9999999854  5999999999999


Q ss_pred             HHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccC
Q 010842          239 ADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLS  318 (499)
Q Consensus       239 ~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~  318 (499)
                      ++++      +|.+.+.++..|.+.|++||+++|+++|+.+|+|+|++.+....+-     +.+ .+|.++++.|||++.
T Consensus       180 ~~T~------lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV-----~el-n~D~~s~s~HK~ygp  247 (428)
T KOG1549|consen  180 SKTR------LVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDV-----QEL-NADFLSISAHKIYGP  247 (428)
T ss_pred             CCce------EEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccH-----HHc-CchheeeecccccCC
Confidence            9876      8999999999999999999999999999999999999987655432     111 399999999999996


Q ss_pred             CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC--cHHHHHHHHHhc--HHHHHHHHHHHHH
Q 010842          319 YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK--SLRLWMVLRSYG--VLNLQSHIRSDIR  394 (499)
Q Consensus       319 p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~--al~~~~~l~~~g--~~g~~~~~~~~~~  394 (499)
                      |. +|++++|...   ..+...|.+..+... .         ++.-+.+..  ++.+-.+.+..-  ....+.++.   +
T Consensus       248 ~~-iGaLYvr~~~---~~~~~~p~~~GGgq~-r---------~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~---~  310 (428)
T KOG1549|consen  248 PG-IGALYVRRKR---PRLRVEPPLSGGGQE-R---------GLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIK---R  310 (428)
T ss_pred             Cc-ceEEEEccCC---CcccccCcccCCccc-c---------ccccCCcCchhhhhhHHHHHHHHhhcchhHHHHH---H
Confidence            65 9999999722   122344555444321 1         111122211  222333333331  122233332   3


Q ss_pred             HHHHHHHHHh-cCCCeEEEcC-----CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee-----------
Q 010842          395 LAKMFEGFVK-SDPRFEIVVP-----RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT-----------  457 (499)
Q Consensus       395 ~a~~l~~~L~-~~~~~~~~~~-----~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-----------  457 (499)
                      +...+...+. ..++..+...     +.+..+.|.+....        .+...+.+.-...|..+.+..           
T Consensus       311 ~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~~g~--------~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G  382 (428)
T KOG1549|consen  311 LSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYVEGE--------SLLMDLKDVALSSGSACTSASLEPSYVLRAIG  382 (428)
T ss_pred             HHHHHHHHHhhhCchhhccCCcccccccceeeecccccCc--------chhhhhhhhhhcccchhhcCCCCcchhhhhcC
Confidence            4444544443 3555555443     22333444422110        011111222222232221111           


Q ss_pred             --eECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          458 --IVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       458 --~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                        ....+..+|++++ .+++++|++++++.+++.++.+..
T Consensus       383 ~~~~~~~~~iRis~G-~y~t~~di~~~~~~i~~~v~~~~~  421 (428)
T KOG1549|consen  383 VDEDLAHSSIRISIG-RYTTEEDIDYLVDAIKKLVSLLRE  421 (428)
T ss_pred             cchhhhcceeEEeee-eeCcHHHHHHHHHHHHHHHHhccc
Confidence              1123578999996 889999999999999998876543

>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase

Probab=99.94  E-value=3e-24  Score=216.51  Aligned_cols=345  Identities=11%  Similarity=0.081  Sum_probs=225.9

Q ss_pred             cccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHH
Q 010842           93 FAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIA  172 (499)
Q Consensus        93 ~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~  172 (499)
                      +=+.|++......+-+.+..-+    .++  .+....+-+++++.+++++|.++..     ...++|+|||+|+..++..
T Consensus         5 ~l~~pgp~~~~~~v~~~~~~~~----~~~--~~~~~~~~~~~r~~la~l~~~~~~~-----~~i~~t~~~t~al~~~~~~   73 (363)
T TIGR02326         5 LLLTPGPLTTSRTVKEAMLFDW----CTW--DSDYNIVVEQIRQQLLALATAEEGY-----TSVLLQGSGTFAVEAVIGS   73 (363)
T ss_pred             eEecCCCCCCCHHHHHHhCCCC----CCC--ChHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCCCHHHHHHHHHh
Confidence            3356766666555544433322    122  3455666677889999999996531     1258999999998877765


Q ss_pred             HHHHHHhHhhhhccCCeEEEcCCCCchh-HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEE
Q 010842          173 ARDRALDAVGAENMHKLVVYGSDQTHST-FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLC  251 (499)
Q Consensus       173 ar~~~~~~~~~~g~~~~~i~~s~~~H~s-~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv  251 (499)
                      ....          ++.+|+++...|.+ +.+.++..|+   +++.||+++++  .+|+++|++++.++++    +.+|.
T Consensus        74 l~~~----------~~~vlv~~~~~~~~~~~~~a~~~g~---~~~~v~~~~~~--~~d~~~l~~~l~~~~~----~~~v~  134 (363)
T TIGR02326        74 AVPK----------DGKLLVVINGAYGARIVQIAEYLGI---PHHVVDTGEVE--PPDVVEVEAILAADPA----ITHIA  134 (363)
T ss_pred             cCCC----------CCeEEEEeCChhhHHHHHHHHHcCC---ceEEEeCCCCC--CCCHHHHHHHHhhCCC----ccEEE
Confidence            5321          23445555555555 4677888999   99999988654  8999999999875321    23678


Q ss_pred             EecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCch
Q 010842          252 ATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPG  331 (499)
Q Consensus       252 ~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~  331 (499)
                      +++++|+||.+.|+++|+++||++|++++||++++.+....+     +..+ .+|.++.++|||+++|.|.|+++++++.
T Consensus       135 ~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~-----~~~~-~~D~~~~s~~K~l~~p~G~G~l~~~~~~  208 (363)
T TIGR02326       135 LVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPID-----IAEL-HIDYLISSANKCIQGVPGFGFVIARQAE  208 (363)
T ss_pred             EEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccc-----hhhc-CccEEEecCccccccCCcceEEEECHHH
Confidence            888899999999999999999999999999998865433221     1111 3899999999999999999999997753


Q ss_pred             hHHHhhcCCcc-CCCCCCCCCCCcccCCCcccCCCCCCC-----cHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHh
Q 010842          332 LLVKALSTDPE-YLKNKPSESNSVVDFKDWQVGTGRRFK-----SLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGFVK  404 (499)
Q Consensus       332 ~l~~~~~~~~~-yl~~~~~~~~~~~~~~~~~~~~sr~~~-----al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~  404 (499)
                       +.+......+ |+....     .+....+ ....++|.     ...+..+++.+..+ +++++.++..++++++.+.|+
T Consensus       209 -~~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~  281 (363)
T TIGR02326       209 -LAACKGNARSLSLDLYD-----QWRCMED-NHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMR  281 (363)
T ss_pred             -HHHhhcCCCceeecHHH-----HHHHHhc-cCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHH
Confidence             2221111111 100000     0000000 00112221     23455566666555 488888999999999999998


Q ss_pred             cCCCeEEEcCC--CceE-EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHH
Q 010842          405 SDPRFEIVVPR--HFAL-VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVA  481 (499)
Q Consensus       405 ~~~~~~~~~~~--~~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~  481 (499)
                      +. +++++.++  ..++ ++|++.+..       ......+.+.|.++|+.+..+... +..++|++++ ..++.+|+++
T Consensus       282 ~~-g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~v~~~L~~~gi~v~~g~~~-~~~~iRi~~~-~~~~~edv~~  351 (363)
T TIGR02326       282 AL-GFEPLLDDEIQSPIITSFYSPEDP-------DYRFADFYQRLKEQGFVIYPGKVS-QVDCFRIGNI-GEVDAADITR  351 (363)
T ss_pred             Hc-CCeeccCcccCCceEEEEECCCCC-------CCCHHHHHHHHHHCCEEEECCcCC-CCCEEEEecC-CCCCHHHHHH
Confidence            87 78876543  3443 456654320       001346777787778654333222 3467999985 5689999999


Q ss_pred             HHHHHHHHH
Q 010842          482 AWELIMEGA  490 (499)
Q Consensus       482 l~~~l~~~~  490 (499)
                      ++++|+++.
T Consensus       352 ~l~~l~~~l  360 (363)
T TIGR02326       352 LLTAIGKAM  360 (363)
T ss_pred             HHHHHHHHh
Confidence            999998763

Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.

>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase

Probab=99.93  E-value=8.8e-23  Score=205.95  Aligned_cols=309  Identities=14%  Similarity=0.133  Sum_probs=207.4

Q ss_pred             HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCC
Q 010842          133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSP  212 (499)
Q Consensus       133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~  212 (499)
                      ++.+.+++++|.+..         .+++||++++..++.+...           ++..|+++...|++...+++..|+  
T Consensus        55 ~~~e~lA~~~g~~~~---------~i~~g~~~a~~~~~~~l~~-----------~gd~Vl~~~~~h~s~~~~~~~~g~--  112 (370)
T TIGR02539        55 DFLEDLAEFLGMDEA---------RVTHGAREGKFAVMHALCK-----------EGDWVVLDGLAHYTSYVAAERAGL--  112 (370)
T ss_pred             HHHHHHHHHhCCCce---------EEECChHHHHHHHHHHhhC-----------CCCEEEECCcccHHHHHHHHHcCC--
Confidence            344559999999764         7789999998877766532           566788899999999899999999  


Q ss_pred             CCeEEeeCCCCCCCccCHHHHHHHHHHHHHc-CCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhcc
Q 010842          213 ANIRALPTSVDANFSLSPQLLRRAVEADVEA-GLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACI  291 (499)
Q Consensus       213 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~-g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~  291 (499)
                       +++.+|.+.+.+|.+|+++|++++.+.++. +..+.+|+++++++++|.+.|+++|+++|+++|++++||+||+.+...
T Consensus       113 -~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~  191 (370)
T TIGR02539       113 -NVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMP  191 (370)
T ss_pred             -EEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcC
Confidence             999999875445899999999999764332 124568888999999999999999999999999999999999875321


Q ss_pred             CccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCc-cCCCCCCCCCCCcccCCCcccCCCCCC-C
Q 010842          292 CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDP-EYLKNKPSESNSVVDFKDWQVGTGRRF-K  369 (499)
Q Consensus       292 ~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~~sr~~-~  369 (499)
                      .+ ..    . ..+|.++.++|||++.+.++|+++.++. .. +.+.... +|.....       .    .+..+... .
T Consensus       192 ~~-~~----~-~~~di~v~s~sK~~~~~g~~G~l~~~~~-~i-~~l~~~~~~~~~~~~-------~----~~~~~~~~~~  252 (370)
T TIGR02539       192 VS-AK----E-IGADFIVGSGHKSMAASGPCGVLGMSEE-WE-DIVLRKSRYSPVKEV-------E----LLGCTSRGAP  252 (370)
T ss_pred             CC-HH----H-cCCCEEEeeCcccccCCCCEEEEEECHH-HH-hhhcccccCCcccee-------e----eecccccccH
Confidence            11 11    1 1389999999999987777898887653 22 3332222 2211110       0    01111111 2


Q ss_pred             cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE--cCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH
Q 010842          370 SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV--VPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN  447 (499)
Q Consensus       370 al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~--~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~  447 (499)
                      +..++.++... .+.++ ..++..++++++++.|+++ +++++  .++..+++.+++..... .....+.....+.++|.
T Consensus       253 ~~~~~~al~~~-~~~l~-~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~-~~~~~~~~~~~~~~~L~  328 (370)
T TIGR02539       253 IVTMMASFPHV-VERVK-RWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHE-IAQKHKRRGYFLYEELK  328 (370)
T ss_pred             HHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhH-HhhhhccccHHHHHHHH
Confidence            22333333221 22222 2344556678999999998 78875  35667778776532100 00000112346788888


Q ss_pred             hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          448 STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       448 ~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      ++|+..+.+   ....++|++++  ..|++|+++++++|+++.++
T Consensus       329 e~GI~~ir~---~~~~~iRis~~--~~t~e~i~~l~~~L~~~~~~  368 (370)
T TIGR02539       329 KRGIHGIRS---GQTKYFKLSVY--GLTKEQVEYVVDSFEEIVEE  368 (370)
T ss_pred             hCCCccccC---CcceEEEEEec--CCCHHHHHHHHHHHHHHHHh
Confidence            889642222   22458999984  35999999999999988765

Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.

>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase

Probab=99.93  E-value=1.5e-23  Score=210.73  Aligned_cols=342  Identities=15%  Similarity=0.126  Sum_probs=223.1

Q ss_pred             cCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHH
Q 010842           95 FFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAAR  174 (499)
Q Consensus        95 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar  174 (499)
                      |.|++..++..+.+.+...++.    |  .+....+..++++.+++++|.++..     -..++++|||+++..++....
T Consensus         3 ~~p~p~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~la~~~~~~~~~-----~~i~~~~~gt~~l~~~~~~~~   71 (355)
T TIGR03301         3 LTPGPLSTSATVRDAMLVDWCH----W--DSEFNDVTDQVRDRLLALAGGDDNH-----TCVLLQGSGTFAVEATIGSLV   71 (355)
T ss_pred             CcCCCCCCCHHHHHHhhhhccC----C--CHHHHHHHHHHHHHHHHHhcCCCCC-----cEEEEeCCcHHHHHHHHHhcc
Confidence            4566666666666666654432    2  2233466777888899999997641     124689999999888877653


Q ss_pred             HHHHhHhhhhccCCeEEEcCCCCchh-HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEe
Q 010842          175 DRALDAVGAENMHKLVVYGSDQTHST-FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCAT  253 (499)
Q Consensus       175 ~~~~~~~~~~g~~~~~i~~s~~~H~s-~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t  253 (499)
                      ..          ++.+++++...|.+ +..+++..|+   +++.++.+.+  +.+|+++|++.+++++    .+.+|+.+
T Consensus        72 ~~----------~~~vi~~~~~~~~~~~~~~a~~~g~---~~~~i~~~~~--~~~d~~~l~~~l~~~~----~~~~v~~~  132 (355)
T TIGR03301        72 PR----------DGKLLVLINGAYGERLAKICEYLGI---PHTDLNFSEY--EPPDLNRIEEALAADP----DITHVATV  132 (355)
T ss_pred             CC----------CCeEEEECCCchhhHHHHHHHHcCC---ceEEEecCCC--CCCCHHHHHHHHHhCC----CceEEEEE
Confidence            21          23345455444444 5677888999   9999998753  4899999999987532    23467788


Q ss_pred             cCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhH
Q 010842          254 VGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLL  333 (499)
Q Consensus       254 ~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l  333 (499)
                      +++|++|.+.|+++|+++|++||+++++|++++.+....+     +... .+|+++.++|||+++|.|+|+++++++. +
T Consensus       133 ~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~-----~~~~-~~d~~~~s~~K~l~~~~G~g~~~~~~~~-~  205 (355)
T TIGR03301       133 HHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPID-----IEEL-DVDALIASANKCLEGVPGFGFVIARRDL-L  205 (355)
T ss_pred             ecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccc-----hhhc-CccEEEecCCcccccCCceeEEEECHHH-H
Confidence            8999999999999999999999999999987754322111     1111 4899999999999888899999987643 3


Q ss_pred             HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC-----cHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCC
Q 010842          334 VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK-----SLRLWMVLRSYGVLN-LQSHIRSDIRLAKMFEGFVKSDP  407 (499)
Q Consensus       334 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-----al~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~  407 (499)
                      ........++..+...    ...+.  .-....++.     ...+..+++.+..+| +++..++..++++++.+.|++. 
T Consensus       206 ~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-  278 (355)
T TIGR03301       206 EASAGNARSLYLDLYD----QWAYM--EKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-  278 (355)
T ss_pred             HHhhCCCCCceeeHHH----HHHHh--hhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-
Confidence            2221111111111000    00000  000111111     133455666665565 8888899999999999999887 


Q ss_pred             CeEEEcCCC--ce-EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHH
Q 010842          408 RFEIVVPRH--FA-LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWE  484 (499)
Q Consensus       408 ~~~~~~~~~--~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~  484 (499)
                      +++++.++.  .+ +++|++++..       .....++.++|.++|..+ .+.......++|+++. ..++++|++++++
T Consensus       279 g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~gi~i-~~~~~~~~~~iRis~~-~~~~~~~i~~~~~  349 (355)
T TIGR03301       279 GFQPLLPERWQSPIIVSFLYPDDP-------DFDFDDFYQELKERGFVI-YPGKLTLADTFRIGTI-GEIDAADIERLLE  349 (355)
T ss_pred             CCeeecCCCCCCCcEEEEECCCCC-------cchHHHHHHHHHHCCEEE-ECCccccccEEEEecC-CCCCHHHHHHHHH
Confidence            788765432  22 3556654311       111356778888888654 3332122368999984 6789999999999


Q ss_pred             HHHHH
Q 010842          485 LIMEG  489 (499)
Q Consensus       485 ~l~~~  489 (499)
                      .|+++
T Consensus       350 ~l~~~  354 (355)
T TIGR03301       350 AIKDA  354 (355)
T ss_pred             HHHhh
Confidence            99864

This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.

>TIGR03235 DNA_S_dndA cysteine desulfurase DndA

Probab=99.93  E-value=5.4e-24  Score=213.80  Aligned_cols=274  Identities=13%  Similarity=0.084  Sum_probs=190.0

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK  203 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k  203 (499)
                      +.....+.+++++++++++|.+.+       ..++|+|+|+|+..++.+.......      ..+..|+++...|+++..
T Consensus        37 ~~~~~~~~~~~r~~la~~~g~~~~-------~v~~~~g~t~a~~~~l~~l~~~~~~------~g~~~vi~~~~~~~s~~~  103 (353)
T TIGR03235        37 GHNAKKAVERARKQVAEALGADTE-------EVIFTSGATESNNLAILGLARAGEQ------KGKKHIITSAIEHPAVLE  103 (353)
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHHHHHHHHHHHHHhccc------CCCCeeeEcccccHHHHH
Confidence            334456677889999999999754       3699999999988887765432100      022678889999998766


Q ss_pred             HH---HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842          204 VC---KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH  280 (499)
Q Consensus       204 a~---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh  280 (499)
                      ..   +..|+   +++.||++++  +.+|+++|++.++++      +.+|++++++|++|.+.|+++|+++|+++|+|+|
T Consensus       104 ~~~~~~~~G~---~v~~v~~~~~--~~~d~~~l~~~l~~~------~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~i  172 (353)
T TIGR03235       104 PIRALERNGF---TVTYLPVDES--GRIDVDELADAIRPD------TLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFH  172 (353)
T ss_pred             HHHHHHhcCC---EEEEEccCCC--CcCCHHHHHHhCCCC------CEEEEEEcccCCceeccCHHHHHHHHHHcCCEEE
Confidence            54   34577   9999998864  489999999988643      3488899999999999999999999999999999


Q ss_pred             eeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCc
Q 010842          281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDW  360 (499)
Q Consensus       281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~  360 (499)
                      ||++++.+....+-.      ...+|++++++|||+ +|.|+|+++++++....  ....+.+.....          ..
T Consensus       173 vD~a~~~g~~~~~~~------~~~~D~~~~s~~K~~-gp~g~g~l~~~~~~~~~--~~~~~~~~~~~~----------~~  233 (353)
T TIGR03235       173 VDAAQVVGKITVDLS------ADRIDLISCSGHKIY-GPKGIGALVIRKRGKPK--APLKPIMFGGGQ----------ER  233 (353)
T ss_pred             EEchhhcCCcccccc------ccCCCEEEeehhhcC-CCCceEEEEEccCcccc--cccCceeeCCCC----------cC
Confidence            999988765433211      124999999999995 68899999999763211  111221211110          00


Q ss_pred             ccCC-CCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC---ceEEEEEecCCCCCCcchh
Q 010842          361 QVGT-GRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH---FALVCFRLNPYPHSGSADT  435 (499)
Q Consensus       361 ~~~~-sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~  435 (499)
                      ..+. +... ..+.+..+++.+ .++.+++.++..++++++++.|++ +|++++.++.   ..+++|.+....       
T Consensus       234 ~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~~~~-------  304 (353)
T TIGR03235       234 GLRPGTLPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSIDGVN-------  304 (353)
T ss_pred             ccccCCCChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEeCCcC-------
Confidence            1111 1111 123445555554 357888899999999999999988 7999886432   456777664322       


Q ss_pred             HHHHHHHHHHHHhcCCEE
Q 010842          436 EMLNRKLLDWVNSTGRVY  453 (499)
Q Consensus       436 ~~~~~~l~~~l~~~g~~~  453 (499)
                         .+.+.+.|.+ ++.+
T Consensus       305 ---~~~v~~~L~~-~i~v  318 (353)
T TIGR03235       305 ---SEALIVNLRA-DAAV  318 (353)
T ss_pred             ---HHHHHHHHhC-CeEE
Confidence               3556677744 5433

This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.

>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional

Probab=99.92  E-value=5.4e-23  Score=207.78  Aligned_cols=345  Identities=14%  Similarity=0.090  Sum_probs=224.9

Q ss_pred             cCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHH
Q 010842           95 FFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAAR  174 (499)
Q Consensus        95 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar  174 (499)
                      +.|++..+...+.+.+...+    ..|  ++.......++.+.+++++|.+++.     ...+++++||+++..++....
T Consensus         9 ~~pgP~~~~~~~~~a~~~~~----~~~--~~~~~~~~~~~~~~l~~l~~~~~~~-----~~i~~~~~gt~~l~~~~~~l~   77 (368)
T PRK13479          9 LTPGPLTTSRTVREAMLRDW----GSW--DDDFNALTASVRAKLVAIATGEEGY-----TCVPLQGSGTFSVEAAIGSLV   77 (368)
T ss_pred             ecCCCCCCCHHHHHHhCCCC----CCC--ChHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCCcHHHHHHHHHhcc
Confidence            55666655555544443322    222  3445567778888899999986431     124689999999888777653


Q ss_pred             HHHHhHhhhhccCCeEEEcCCCCchhH--HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEE
Q 010842          175 DRALDAVGAENMHKLVVYGSDQTHSTF--AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCA  252 (499)
Q Consensus       175 ~~~~~~~~~~g~~~~~i~~s~~~H~s~--~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~  252 (499)
                      .           ++..+++....++..  .+.++..|+   +++.||.+++  +.+|+++|+++++++.+    +.+|.+
T Consensus        78 ~-----------~~~~vlv~~~~~~~~~~~~~~~~~g~---~~~~i~~~~~--~~~d~~~l~~~l~~~~~----~~~v~~  137 (368)
T PRK13479         78 P-----------RDGKVLVPDNGAYGARIAQIAEYLGI---AHVVLDTGED--EPPDAAEVEAALAADPR----ITHVAL  137 (368)
T ss_pred             C-----------CCCeEEEEeCCchHHHHHHHHHHcCC---cEEEEECCCC--CCCCHHHHHHHHHhCCC----CcEEEE
Confidence            2           334455555555543  578888999   9999998754  48999999999875321    236788


Q ss_pred             ecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchh
Q 010842          253 TVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGL  332 (499)
Q Consensus       253 t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~  332 (499)
                      ++++|++|.+.|+++|+++|+++|++++||++++.+....+     +... .+|.+++++|||+++|.|.|+++++++. 
T Consensus       138 ~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~-----~~~~-~~d~~v~s~~K~l~g~~G~G~l~~~~~~-  210 (368)
T PRK13479        138 VHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPID-----IAEL-GIDALISSANKCIEGVPGFGFVIARRSE-  210 (368)
T ss_pred             EcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCcccc-----cccc-CceEEEecCccccccCCCceEEEECHHH-
Confidence            99999999999999999999999999999987644322111     1111 3899999999999999999999997643 


Q ss_pred             HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-----CcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcC
Q 010842          333 LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-----KSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGFVKSD  406 (499)
Q Consensus       333 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-----~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~  406 (499)
                      +........+|..+...    ...+..  -...+++     ....+..++..+..+ ++++..++..++++++.+.|++.
T Consensus       211 ~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~  284 (368)
T PRK13479        211 LEACKGNSRSLSLDLYD----QWAYME--KTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL  284 (368)
T ss_pred             HHHhhcCCCCeeecHHH----HHhhhc--ccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence            22221111121111000    000000  0011111     123455666665444 47888899999999999999988


Q ss_pred             CCeEEEcCCC--c-eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHH
Q 010842          407 PRFEIVVPRH--F-ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAW  483 (499)
Q Consensus       407 ~~~~~~~~~~--~-~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~  483 (499)
                       +++++.++.  . .+++|.+....       .....++.++|.++|+++ .+.......++|++++ ..++++|+++++
T Consensus       285 -g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~L~~~gi~v-~~g~~~~~~~iRis~~-~~~t~edi~~~l  354 (368)
T PRK13479        285 -GFEPLLDAEIQSPIIVTFHAPADP-------AYDFKEFYERLKEQGFVI-YPGKLTQVDTFRIGCI-GDVDAADIRRLV  354 (368)
T ss_pred             -CCcccCCchhcCceEEEEECCCCC-------CcCHHHHHHHHHHCCEEE-ecCCCCCCCEEEEecC-CCCCHHHHHHHH
Confidence             788764432  2 24666654321       001356788888888654 3322222357999875 568999999999


Q ss_pred             HHHHHHHHHH
Q 010842          484 ELIMEGADRL  493 (499)
Q Consensus       484 ~~l~~~~~~l  493 (499)
                      ++|+++.+++
T Consensus       355 ~~L~~~l~~~  364 (368)
T PRK13479        355 AAIAEALYWM  364 (368)
T ss_pred             HHHHHHHHHc
Confidence            9999988765

>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=99.92  E-value=1.4e-22  Score=204.02  Aligned_cols=345  Identities=14%  Similarity=0.103  Sum_probs=242.8

Q ss_pred             cccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHH
Q 010842           93 FAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIA  172 (499)
Q Consensus        93 ~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~  172 (499)
                      ++.-.++...|..+.+.+...++.....|....+..+|.+++.+++.+.+|.....    ....++|+|+++|++.++.+
T Consensus        33 l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~----~~eiivt~Ga~~al~~~~~a  108 (393)
T COG0436          33 LSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDP----EEEIIVTAGAKEALFLAFLA  108 (393)
T ss_pred             eCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCeEEEeCCHHHHHHHHHHH
Confidence            33333344556666666666555432266688899999999999999999853221    01379999999999999988


Q ss_pred             HHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCC-CCCccCHHHHHHHHHHHHHcCCccEEEE
Q 010842          173 ARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVD-ANFSLSPQLLRRAVEADVEAGLVPLFLC  251 (499)
Q Consensus       173 ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~vv  251 (499)
                      ..+           ++..|+++++.+.++.....++|.   .++.||++.. .+|.+|+++|+++++++++      +|+
T Consensus       109 ~~~-----------pGDeVlip~P~Y~~y~~~~~~~gg---~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk------~i~  168 (393)
T COG0436         109 LLN-----------PGDEVLIPDPGYPSYEAAVKLAGG---KPVPVPLDEEENGFKPDLEDLEAAITPKTK------AII  168 (393)
T ss_pred             hcC-----------CCCEEEEeCCCCcCHHHHHHhcCC---EEEEEeCCcCccCCcCCHHHHHhhcCccce------EEE
Confidence            765           677899999999999999999999   9999998653 3699999999999999776      899


Q ss_pred             EecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCc-eeEe-cccccccCC-CcceEE
Q 010842          252 ATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD-SFSF-SPHKWLLSY-LDCCCL  325 (499)
Q Consensus       252 ~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aD-si~~-~~hK~l~~p-~~~g~l  325 (499)
                      ++.|+||||++   +.+++|+++|++||+|+++|.+|....+....+...+.--...| .|++ +..|.++.+ .-+|++
T Consensus       169 ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~  248 (393)
T COG0436         169 LNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWV  248 (393)
T ss_pred             EeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEe
Confidence            99999999999   55899999999999999999999887553211222221111112 4444 678998755 668998


Q ss_pred             EEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc----HHHHHHHHHHHHHHHHHHHH
Q 010842          326 WVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG----VLNLQSHIRSDIRLAKMFEG  401 (499)
Q Consensus       326 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g----~~g~~~~~~~~~~~a~~l~~  401 (499)
                      ...++... +.+..-..|+...                    ...+...++..++.    .+.++.+.+...++++.+.+
T Consensus       249 v~~~~~l~-~~~~~~~~~~~~~--------------------~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~  307 (393)
T COG0436         249 VGPPEELI-AALRKLKSYLTSC--------------------APTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVE  307 (393)
T ss_pred             ecChHHHH-HHHHHHHHhcccC--------------------CCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHH
Confidence            88754332 2222111222111                    12344455555553    23566666788899999999


Q ss_pred             HHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee-eEC---CEEEEEEeccCCCCcHH
Q 010842          402 FVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT-IVG---GLYMLRFAVGASLTDER  477 (499)
Q Consensus       402 ~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~---g~~~lRi~~~~~~~t~~  477 (499)
                      .|.+++++++..+|......|--.+..        ....+++++|.++..+.+.|+ .++   |.+++|++++   ++.+
T Consensus       308 ~l~~~~g~~~~~~p~Ga~Y~~~~i~~~--------~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~---~~~~  376 (393)
T COG0436         308 ALNEIGGLSVVKPPEGAFYLFPKIPEL--------LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLA---TSEE  376 (393)
T ss_pred             HHHhcCCeeeccCCCeeEEEEeecCCC--------CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEe---cCHH
Confidence            999999999987676666666433321        114566666666655555544 343   4479999997   4558


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010842          478 HVVAAWELIMEGADRL  493 (499)
Q Consensus       478 di~~l~~~l~~~~~~l  493 (499)
                      ++++.++.+.+..+.+
T Consensus       377 ~l~~a~~rl~~~~~~~  392 (393)
T COG0436         377 TLEEALRRLARFLAEY  392 (393)
T ss_pred             HHHHHHHHHHHHHHhc
Confidence            9999999998877643

>PLN02721 threonine aldolase

Probab=99.92  E-value=8.4e-23  Score=205.19  Aligned_cols=305  Identities=15%  Similarity=0.153  Sum_probs=195.9

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      .+|...++|++    +++++|.+.         ++++++||++++.++.+....          ++..|++++.+|+++.
T Consensus        38 ~~~~~~~l~~~----la~~~~~~~---------~~~~~~Gs~a~~~~l~~~~~~----------~gd~Vl~~~~~~~~~~   94 (353)
T PLN02721         38 YDPTALRLEEE----MAKIFGKEA---------ALFVPSGTMGNLISVLVHCDV----------RGSEVILGDNSHIHLY   94 (353)
T ss_pred             CCHHHHHHHHH----HHHHhCCce---------eEEecCccHHHHHHHHHHccC----------CCCeEEEcCccceehh
Confidence            35666677777    777788754         388888999988777765321          4567889999998877


Q ss_pred             H---HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC-CccEEEEEec-CCCcccccCC---hhHHHHHHHH
Q 010842          203 K---VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG-LVPLFLCATV-GTTSTTAVDN---VEPLAEVANE  274 (499)
Q Consensus       203 k---a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g-~~p~~vv~t~-gtt~~G~id~---l~~I~~ia~~  274 (499)
                      +   .+...|+   +++.+|.+++  +.+|+++|++.|++....+ ..+.+|+.+. .++++|.+-|   +++|+++|++
T Consensus        95 ~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~  169 (353)
T PLN02721         95 ENGGISTLGGV---HPRTVKNNED--GTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKR  169 (353)
T ss_pred             cccchhhhcCc---eeEecCCCcC--CCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHH
Confidence            7   4677888   9999998754  5899999999997431111 1234566655 4667888744   8899999999


Q ss_pred             hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842          275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV  354 (499)
Q Consensus       275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  354 (499)
                      +|+|+|+|+||.......... ........+|+++++.|||++.|.  |.+++.+++... .+.....+...        
T Consensus       170 ~g~~livD~a~~~~~~~~~~~-~~~~~~~~~d~~~~s~sK~l~~~~--G~~~~~~~~~~~-~~~~~~~~~~~--------  237 (353)
T PLN02721        170 HGLKLHIDGARIFNASVALGV-PVHRLVKAADSVSVCLSKGLGAPV--GSVIVGSKSFIR-KAKRLRKTLGG--------  237 (353)
T ss_pred             cCCEEEEEchhhhcchhhhCC-CHHHHhhhCCEEEEecccccCCce--eeEEecCHHHHH-hHHHHHHhcCC--------
Confidence            999999999875322111111 111112358999999999998774  444444544332 11110000000        


Q ss_pred             ccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-EcCCCceEEEEEecCCCCCCcc
Q 010842          355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI-VVPRHFALVCFRLNPYPHSGSA  433 (499)
Q Consensus       355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~-~~~~~~~~v~f~~~~~~~~~~~  433 (499)
                                +.+.......+++..+  +...+.+++..++++++.+.|++++++++ +.++..+++.+++....     
T Consensus       238 ----------~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~-----  300 (353)
T PLN02721        238 ----------GMRQVGVLAAAALVAL--QENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGS-----  300 (353)
T ss_pred             ----------CeehhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCc-----
Confidence                      0000111111122221  22233445556788899999999988875 55666677777765310     


Q ss_pred             hhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          434 DTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       434 ~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                        ......+.++|.++|+.+...    +..++|+++ +..++++|+++++++|++++.
T Consensus       301 --~~~~~~~~~~L~~~gi~v~~~----~~~~lR~~~-~~~~~~~~i~~~~~~l~~~~~  351 (353)
T PLN02721        301 --RITAEKLCKSLEEHGVLLMPG----NSSRIRVVT-HHQISDSDVQYTLSCFQQAAL  351 (353)
T ss_pred             --cccHHHHHHHHHhCCcEEecC----CCceEEEEe-cCcCCHHHHHHHHHHHHHHhh
Confidence              012456788888888665432    346899998 478899999999999998764

>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]

Probab=99.92  E-value=1.1e-22  Score=198.64  Aligned_cols=318  Identities=16%  Similarity=0.125  Sum_probs=228.6

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--  200 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--  200 (499)
                      .+|.+..+-+++++.+..+|+.+...      --+++++||.|.-.++.....           ++..|++....-|.  
T Consensus        32 ~s~~F~~~~~~~~~~L~~v~~t~~~~------~~ll~gsGt~amEAav~sl~~-----------pgdkVLv~~nG~FG~R   94 (383)
T COG0075          32 RSPDFVGIMKEVLEKLRKVFGTENGD------VVLLSGSGTLAMEAAVASLVE-----------PGDKVLVVVNGKFGER   94 (383)
T ss_pred             CCHHHHHHHHHHHHHHHHHhcCCCCc------EEEEcCCcHHHHHHHHHhccC-----------CCCeEEEEeCChHHHH
Confidence            46888999999999999999987421      237788898776665554432           45566666666554  


Q ss_pred             HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842          201 FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH  280 (499)
Q Consensus       201 ~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh  280 (499)
                      +.+.++.+|.   +++.+.+....  .+|+++++++|+++..    +-+|.++|+.|+||...|+++|+++|++||..++
T Consensus        95 ~~~ia~~~g~---~v~~~~~~wg~--~v~p~~v~~~L~~~~~----~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~i  165 (383)
T COG0075          95 FAEIAERYGA---EVVVLEVEWGE--AVDPEEVEEALDKDPD----IKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLI  165 (383)
T ss_pred             HHHHHHHhCC---ceEEEeCCCCC--CCCHHHHHHHHhcCCC----ccEEEEEeccCcccccCcHHHHHHHHHHcCCEEE
Confidence            8899999999   99999988654  8999999999985432    3389999999999999999999999999999999


Q ss_pred             eeccc--cchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCcc--CCCCCCCCCCCccc
Q 010842          281 VDAAY--AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPE--YLKNKPSESNSVVD  356 (499)
Q Consensus       281 vD~A~--g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~--yl~~~~~~~~~~~~  356 (499)
                      ||+.-  |+--+..+++        ++|.+...+||++..|.|.+++.++++.. ........+  |+.-..     ...
T Consensus       166 VDaVsS~Gg~~~~vd~w--------giDv~itgSQK~l~~PPGla~v~~S~~a~-e~~~~~~~~~~ylDL~~-----~~~  231 (383)
T COG0075         166 VDAVSSLGGEPLKVDEW--------GIDVAITGSQKALGAPPGLAFVAVSERAL-EAIEERKHPSFYLDLKK-----WLK  231 (383)
T ss_pred             EEecccCCCcccchhhc--------CccEEEecCchhccCCCccceeEECHHHH-HHHhcCCCCceeecHHH-----HHH
Confidence            99864  4433333333        39999999999999999999999988753 233333222  332110     001


Q ss_pred             CCCcccCCCCCCC-----cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC--CceEEEEEecCCCC
Q 010842          357 FKDWQVGTGRRFK-----SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR--HFALVCFRLNPYPH  429 (499)
Q Consensus       357 ~~~~~~~~sr~~~-----al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~~~~v~f~~~~~~~  429 (499)
                      +.+.  ....++.     -..+..+++.+-.+|++++++|+.++++++++.++++ |++++.++  .+++++....|.+ 
T Consensus       232 ~~~~--~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g-  307 (383)
T COG0075         232 YMEK--KGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEG-  307 (383)
T ss_pred             HHhh--cCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCC-
Confidence            1100  0222332     2466777888888999999999999999999999998 89988733  3444444344432 


Q ss_pred             CCcchhHHHHHHHHHHHHhcCCEEEEeee--ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          430 SGSADTEMLNRKLLDWVNSTGRVYLTHTI--VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       430 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                           ++  .+++...+.+++.+.+++..  +.| .++||..|. ..+.+|+..++++|..+..++
T Consensus       308 -----~~--~~~~~~~~~~~~g~~i~gg~~~l~g-kifRIGhMG-~~~~~dv~~~l~ale~~L~~~  364 (383)
T COG0075         308 -----VD--DKKVRRALLKEYGVEIAGGQGPLKG-KIFRIGHMG-NVRPEDVLAALAALEAALREL  364 (383)
T ss_pred             -----CC--cHHHHHHHHHhCCEEecccccccCc-cEEEEecCc-cCCHHHHHHHHHHHHHHHHHc
Confidence                 11  22333355555555555433  334 469999996 899999999999999988776

>PRK07179 hypothetical protein; Provisional

Probab=99.91  E-value=3.1e-22  Score=204.79  Aligned_cols=331  Identities=13%  Similarity=0.077  Sum_probs=213.5

Q ss_pred             CCCCccccccCCCCCChHHHHHHHHHHHcccC--Ccccc-cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCCh
Q 010842           86 HWLSPNFFAFFPATVSTAGFLGEMLCACFNSV--GFNWL-ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTT  162 (499)
Q Consensus        86 ~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~--~~~~~-~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~gg  162 (499)
                      .+.+-.|+|... .+.....+.+.+....+..  ...+. ..+...++|++    +++++|.+..         ++++||
T Consensus        58 ~~~~~~YL~l~~-~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~----la~~~g~~~~---------~~~~sG  123 (407)
T PRK07179         58 ILQSNDYLNLSG-HPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKK----LAAFTGFESC---------LLCQSG  123 (407)
T ss_pred             EeecCCccCCCC-CHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHH----HHHHhCCCcE---------EEECCH
Confidence            345566777662 2223333334443322111  11121 22455666654    8888888653         889999


Q ss_pred             HHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH
Q 010842          163 SDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE  242 (499)
Q Consensus       163 t~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~  242 (499)
                      ++||..++.+...           ++..|+++...|.++...++..|.   .++.++       ..|+++|++++++.  
T Consensus       124 ~~An~~~l~~l~~-----------~g~~v~~~~~~h~s~~~~~~~~g~---~~~~~~-------~~d~~~l~~~l~~~--  180 (407)
T PRK07179        124 WAANVGLLQTIAD-----------PNTPVYIDFFAHMSLWEGVRAAGA---QAHPFR-------HNDVDHLRRQIERH--  180 (407)
T ss_pred             HHHHHHHHHHhCC-----------CCCEEEEECCcCHHHHHHHHHCCC---eEEEec-------CCCHHHHHHHHHhc--
Confidence            9999988876532           455788899999999998888888   665443       35999999998652  


Q ss_pred             cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhh--cCC-CCCceeEecccccccCC
Q 010842          243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL--NGI-ERVDSFSFSPHKWLLSY  319 (499)
Q Consensus       243 ~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~--~g~-~~aDsi~~~~hK~l~~p  319 (499)
                         .+.+|++..+++++|.+.|+++|.++|+++|+++|+|++|+.+... +..+...  .++ ..+|.++.+.||+++. 
T Consensus       181 ---~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g-~~g~g~~~~~~~~~~vdi~~~S~sK~~g~-  255 (407)
T PRK07179        181 ---GPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHG-PQGAGLVAELGLTSRVHFITASLAKAFAG-  255 (407)
T ss_pred             ---CCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcC-CCCCchHHhcCCCCCCCEEEeechHhhhc-
Confidence               1347778889999999999999999999999999999999754321 1111111  122 3579999999999974 


Q ss_pred             CcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 010842          320 LDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAK  397 (499)
Q Consensus       320 ~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~  397 (499)
                       .+|+++.++.  +.+.+.. ..++....                 +-.. .+..+.++++.+  +...+..++..++++
T Consensus       256 -~~G~l~~~~~--~~~~~~~~~~~~~~~~-----------------t~~~~~~aa~~aal~~~--~~~~~~~~~l~~~~~  313 (407)
T PRK07179        256 -RAGIITCPRE--LAEYVPFVSYPAIFSS-----------------TLLPHEIAGLEATLEVI--ESADDRRARLHANAR  313 (407)
T ss_pred             -cCeEEEeCHH--HHHHHHHhCcCeeeCC-----------------CCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHH
Confidence             3788877643  2222211 11111110                 1000 112233344443  223456788889999


Q ss_pred             HHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE---EEeeeECCEEEEEEeccCCCC
Q 010842          398 MFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY---LTHTIVGGLYMLRFAVGASLT  474 (499)
Q Consensus       398 ~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~g~~~lRi~~~~~~~  474 (499)
                      ++.+.|+++ ++++.  ...+++.+.+..         ......+.+.|.++|+..   ..+....+..++|+++. ..+
T Consensus       314 ~l~~~L~~~-g~~v~--~~~~i~~l~~~~---------~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~-~~~  380 (407)
T PRK07179        314 FLREGLSEL-GYNIR--SESQIIALETGS---------ERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLN-ADL  380 (407)
T ss_pred             HHHHHHHHc-CCCCC--CCCCEEEEEeCC---------HHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEEC-CCC
Confidence            999999987 77765  234667666532         112456777888888641   22222234578999995 889


Q ss_pred             cHHHHHHHHHHHHHHHHHH
Q 010842          475 DERHVVAAWELIMEGADRL  493 (499)
Q Consensus       475 t~~di~~l~~~l~~~~~~l  493 (499)
                      |++||++++++|+++.++.
T Consensus       381 t~edi~~~~~~l~~~~~~~  399 (407)
T PRK07179        381 TASDLDRVLEVCREARDEV  399 (407)
T ss_pred             CHHHHHHHHHHHHHHHHhh
Confidence            9999999999999987764

>PRK08361 aspartate aminotransferase; Provisional

Probab=99.91  E-value=7.2e-22  Score=201.04  Aligned_cols=331  Identities=11%  Similarity=0.131  Sum_probs=220.5

Q ss_pred             HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      +..+.+.+...+......|...++...+++++.+++.+.+|.+-+.     ...++|+|+++|+..++.+...       
T Consensus        48 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~-------  115 (391)
T PRK08361         48 PKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDV-----DNVIVTAGAYEATYLAFESLLE-------  115 (391)
T ss_pred             CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCc-----ccEEEeCChHHHHHHHHHHhcC-------
Confidence            3455666665554433456666778999999999998887753211     1468999999998877765532       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|+++..+|.++...+...|+   +++.+|++.+++|.+|+++|++.++++++      +|+++.++|+||.+
T Consensus       116 ----~g~~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~------~v~i~~p~NPtG~~  182 (391)
T PRK08361        116 ----EGDEVIIPDPAFVCYVEDAKIAEA---KPIRIPLREENEFQPDPDELLELITKRTR------MIVINYPNNPTGAT  182 (391)
T ss_pred             ----CCCEEEEcCCCCcccHHHHHHcCC---EEEEEecCCccCCCCCHHHHHHhcccccE------EEEEeCCCCCCCcC
Confidence                466788899999999999999999   99999998766689999999999876443      67888999999999


Q ss_pred             CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhc
Q 010842          263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALS  338 (499)
Q Consensus       263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~  338 (499)
                      -|   +++|+++|+++++++++|++|+.+.................+.++.+.+|.++.| ..+|+++..+ +...+ +.
T Consensus       183 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~-~~~~~-~~  260 (391)
T PRK08361        183 LDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPE-QVIKD-MI  260 (391)
T ss_pred             cCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCH-HHHHH-HH
Confidence            88   8899999999999999999997664321111111111112467889999998765 2378888754 32322 21


Q ss_pred             CCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--H--HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842          339 TDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--V--LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP  414 (499)
Q Consensus       339 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~--~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~  414 (499)
                      ....+....                    ...+...++...+.  .  +.+++..++..++++.+.+.|++.+++++. +
T Consensus       261 ~~~~~~~~~--------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~-~  319 (391)
T PRK08361        261 KLHAYIIGN--------------------VASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVF-E  319 (391)
T ss_pred             HHHhhhccC--------------------CChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeec-C
Confidence            111111100                    01233333333332  1  346677777788888899999988888765 4


Q ss_pred             CCceEEE-EEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          415 RHFALVC-FRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       415 ~~~~~v~-f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      |+.+.+. .++.+..      .  ...++.+.+.+ .|+.+..+..+.  +..++|++++   .++++++..++.|+++.
T Consensus       320 p~g~~~~~~~l~~~~------~--~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~al~~l~~~l  388 (391)
T PRK08361        320 PKGAFYVFANIDETG------M--SSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYA---TSKEKLIEAMERMEKAL  388 (391)
T ss_pred             CCEEEEEEEECCCCC------C--CHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHHHH
Confidence            4444433 3554211      0  13455666654 565444433332  3478999996   35778999999888876


Q ss_pred             HH
Q 010842          491 DR  492 (499)
Q Consensus       491 ~~  492 (499)
                      ++
T Consensus       389 ~~  390 (391)
T PRK08361        389 EE  390 (391)
T ss_pred             hc
Confidence            54

>PTZ00094 serine hydroxymethyltransferase; Provisional

Probab=99.91  E-value=1.4e-22  Score=209.21  Aligned_cols=311  Identities=12%  Similarity=0.076  Sum_probs=202.6

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEc---CChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQ---NTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH  198 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t---~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H  198 (499)
                      ........+|..+++.++++||.+.+.       -.++   +|||+||+.++.+...           ++..|+++...|
T Consensus        73 ~g~~~~~~iE~~ar~~~a~lf~a~~~~-------~~~~~~~~sgt~an~~v~~al~~-----------~gd~Ii~~~~eh  134 (452)
T PTZ00094         73 GGNEVVDKIENLCQKRALEAFGLDPEE-------WGVNVQPYSGSPANFAVYTALLQ-----------PHDRIMGLDLPS  134 (452)
T ss_pred             ccchHHHHHHHHHHHHHHHHhCCCccc-------ceeecCCCchHHHHHHHHHHhcC-----------CCCEEEeccccc
Confidence            334456788877889999999997542       1344   7899999988876632           466788888889


Q ss_pred             hhHHHHHHHh--------CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHH
Q 010842          199 STFAKVCKLA--------GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAE  270 (499)
Q Consensus       199 ~s~~ka~~~~--------G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~  270 (499)
                      .+....+..+        |.+- .+..++++.+  +.+|+++|++.+++.+     |.+|+++  .+.+|.+.|+++|++
T Consensus       135 g~~l~~~~~l~~~~~~~~~~~~-~~~~~~~~~~--g~id~~~L~~~l~~~~-----~~lvi~~--~s~~g~~~di~~I~~  204 (452)
T PTZ00094        135 GGHLTHGFYTAKKKVSATSIYF-ESLPYQVNEK--GLIDYDKLEELAKAFR-----PKLIIAG--ASAYPRDIDYKRFRE  204 (452)
T ss_pred             CCcccccccccccccccceeee-eeeecccCCC--CCcCHHHHHHHHHHhC-----CCEEEEe--CCCCCCccCHHHHHH
Confidence            7755433211        1100 3445556654  4999999999996531     3244443  446999999999999


Q ss_pred             HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC-ccCCCCCCC
Q 010842          271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD-PEYLKNKPS  349 (499)
Q Consensus       271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~-~~yl~~~~~  349 (499)
                      +|+++|+++|||++|+.+.+..+-...   .+.++|.+++++|||+++|.| |++++++.. . ..+... ...+..   
T Consensus       205 i~~~~ga~l~vDaaq~~G~i~~~~~~~---~~~~~D~l~~S~hK~l~GP~G-g~l~~~~~~-~-~~l~~~~~~~~~p---  275 (452)
T PTZ00094        205 ICDSVGAYLMADIAHTSGLVAAGVLPS---PFPYADVVTTTTHKSLRGPRS-GLIFYRKKV-K-PDIENKINEAVFP---  275 (452)
T ss_pred             HHHHcCCEEEEeccchhccccCCCCCC---CCCCCcEEEcCCccCCCCCCc-eEEEEeccc-c-hHHHHhhccccCC---
Confidence            999999999999999988664422111   123599999999999999996 777776542 1 111000 000100   


Q ss_pred             CCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC---CCceEEEEEec
Q 010842          350 ESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP---RHFALVCFRLN  425 (499)
Q Consensus       350 ~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~---~~~~~v~f~~~  425 (499)
                                 .++++-.. ....+..+++.+...+++++.++..+++++|.+.|.+. ++++..+   +...++.|...
T Consensus       276 -----------~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~~~  343 (452)
T PTZ00094        276 -----------GLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GYDLVTGGTDNHLVLVDLRPF  343 (452)
T ss_pred             -----------CCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-CcEEecCCCCCceEeecCCcC
Confidence                       01111111 23455666776655677888899999999999999886 8888752   22233334332


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-----CEEEEEEeccCCCCc----HHHHHHHHHHHHHHHHH
Q 010842          426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-----GLYMLRFAVGASLTD----ERHVVAAWELIMEGADR  492 (499)
Q Consensus       426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----g~~~lRi~~~~~~~t----~~di~~l~~~l~~~~~~  492 (499)
                      +..          .+.+...|.+.|+.+-..+...     ....+|+++ +..||    ++||+++++.|.+++..
T Consensus       344 ~~~----------~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~-~~~tt~g~~~~di~~l~~~l~~~~~~  408 (452)
T PTZ00094        344 GIT----------GSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGT-PALTTRGAKEKDFKFVADFLDRAVKL  408 (452)
T ss_pred             CCC----------HHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECC-HHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence            211          3456666656675442221111     126799998 46666    99999999999998874

>PLN02724 Molybdenum cofactor sulfurase

Probab=99.91  E-value=5.7e-22  Score=217.27  Aligned_cols=365  Identities=12%  Similarity=0.034  Sum_probs=229.0

Q ss_pred             cccccCCCCCChHHHHHHHHHHHc-----ccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHH
Q 010842           91 NFFAFFPATVSTAGFLGEMLCACF-----NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDS  165 (499)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A  165 (499)
                      .||.+-.+++.++..+.+++..++     |++ ..+..+..++.+-+++++.+++++|.++..     -..+||+|+|+|
T Consensus        36 iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~-s~~~~s~~~~~~~e~aR~~ia~~lga~~~~-----~~VvFtsnaT~a  109 (805)
T PLN02724         36 VYLDHAGATLYSESQLEAALADFSSNVYGNPH-SQSDSSMRSSDTIESARQQVLEYFNAPPSD-----YACVFTSGATAA  109 (805)
T ss_pred             EeEeCCCCCCCCHHHHHHHHHHHHhhccCCCC-cCcchhhhHHHHHHHHHHHHHHHhCCCccc-----eEEEEeCChHHH
Confidence            578877666656666666665443     222 233445556777778899999999996431     035899999999


Q ss_pred             HHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH---HHHhCCCCCCeEEeeCCCC------CCCccCH--HHHH
Q 010842          166 ILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV---CKLAGVSPANIRALPTSVD------ANFSLSP--QLLR  234 (499)
Q Consensus       166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka---~~~~G~g~~~v~~v~~~~~------~~~~~d~--~~L~  234 (499)
                      +.........   .       ++..|+++...|.|+.-.   ++..|+   .++.+|++.+      +...+++  ++|+
T Consensus       110 lnlva~~l~~---~-------~gd~Iv~t~~eH~svl~~~~~a~~~G~---~v~~v~~~~~~~~~~~~~g~~~~~~~~l~  176 (805)
T PLN02724        110 LKLVGETFPW---S-------SESHFCYTLENHNSVLGIREYALEKGA---AAIAVDIEEAANQPTNSQGSVVVKSRGLQ  176 (805)
T ss_pred             HHHHHHHCCC---C-------CCCeEEEeeccccchHHHHHHHHHcCC---eEEeccchhccccccccccccccchhhhh
Confidence            7655443211   0       356788888899886543   334588   8999988621      1123443  6677


Q ss_pred             HHHHHHHH----cCCccEEEEEecCCCcccccCChhHHHHHHHHh-------C-CEEEeeccccchhccCccchhhhcCC
Q 010842          235 RAVEADVE----AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY-------G-IWVHVDAAYAGSACICPEFRHYLNGI  302 (499)
Q Consensus       235 ~~i~~~~~----~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~-------~-~~lhvD~A~g~~~~~~~~~~~~~~g~  302 (499)
                      +.+.+...    ....+.+|++++.+|.+|.+.|+++|..+++..       | ++++||||++.+....+-.     .+
T Consensus       177 ~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~-----~~  251 (805)
T PLN02724        177 RRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLS-----RY  251 (805)
T ss_pred             hhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCChh-----hc
Confidence            66431110    112235899999999999999999876655532       3 5799999998876544311     11


Q ss_pred             CCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCC---C--C--cccCCCcccCCCCC-C-CcHHH
Q 010842          303 ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSES---N--S--VVDFKDWQVGTGRR-F-KSLRL  373 (499)
Q Consensus       303 ~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~---~--~--~~~~~~~~~~~sr~-~-~al~~  373 (499)
                       .+|++++++|||++.|.|+|++++|++. + ..  ..+.|..+.....   .  .  ........++.|.. + ..+.+
T Consensus       252 -~~Dfl~~S~HK~~GgP~G~G~L~vr~~~-~-~~--l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l  326 (805)
T PLN02724        252 -PADFVVVSFYKIFGYPTGLGALLVRRDA-A-KL--LKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAAL  326 (805)
T ss_pred             -CCCEEEEecceeccCCCCceEEEEehhh-h-hh--hcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHH
Confidence             4899999999999999999999999753 2 11  2233433221000   0  0  00001112333322 2 23566


Q ss_pred             HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC------CeEEEcCC--------CceEEEEEecCCCCCCcchhHHHH
Q 010842          374 WMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP------RFEIVVPR--------HFALVCFRLNPYPHSGSADTEMLN  439 (499)
Q Consensus       374 ~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~------~~~~~~~~--------~~~~v~f~~~~~~~~~~~~~~~~~  439 (499)
                      ..+++.+..-|++++.++..++++++.+.|++++      +++++.+.        +.++|+|.+....   ...+.  .
T Consensus       327 ~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~---~~~v~--~  401 (805)
T PLN02724        327 RHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRAD---GSWVG--H  401 (805)
T ss_pred             HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCC---CCEeC--H
Confidence            6777777666888889999999999999999886      58887542        4679999887532   00110  0


Q ss_pred             HHHHHHHHhcCCEEEEeee---------------------------------ECC--EEEEEEeccCCCCcHHHHHHHHH
Q 010842          440 RKLLDWVNSTGRVYLTHTI---------------------------------VGG--LYMLRFAVGASLTDERHVVAAWE  484 (499)
Q Consensus       440 ~~l~~~l~~~g~~~~~~~~---------------------------------~~g--~~~lRi~~~~~~~t~~di~~l~~  484 (499)
                      ..+...+...|+..-++..                                 +.+  .+++|+|++ +++|.+|||++++
T Consensus       402 ~~v~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g-~ynt~eDvd~lv~  480 (805)
T PLN02724        402 REVEKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFG-YMSTFEDCQKFID  480 (805)
T ss_pred             HHHHHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcC-ccCCHHHHHHHHH
Confidence            1111111223432211111                                 011  278999995 9999999999999


Q ss_pred             HHHHHH
Q 010842          485 LIMEGA  490 (499)
Q Consensus       485 ~l~~~~  490 (499)
                      .|++..
T Consensus       481 ~l~~~~  486 (805)
T PLN02724        481 FIISSF  486 (805)
T ss_pred             HHHHHh
Confidence            999864

>cd00609 AAT_like Aspartate aminotransferase family

Probab=99.91  E-value=9.1e-22  Score=197.07  Aligned_cols=319  Identities=19%  Similarity=0.122  Sum_probs=214.4

Q ss_pred             HHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEE
Q 010842          112 ACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVV  191 (499)
Q Consensus       112 ~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i  191 (499)
                      ...+.+...|...++..++++++.+++...+|.+...     ...++++|+|+|+..++.+...           ++.+|
T Consensus        23 ~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~-----~~~~~~~~~t~a~~~~~~~~~~-----------~g~~v   86 (350)
T cd00609          23 AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPP-----EEIVVTNGAQEALSLLLRALLN-----------PGDEV   86 (350)
T ss_pred             HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCc-----ceEEEecCcHHHHHHHHHHhCC-----------CCCEE
Confidence            4455566677778889999999999999888753221     2468899999988877776632           45679


Q ss_pred             EcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCH--HHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHH
Q 010842          192 YGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSP--QLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLA  269 (499)
Q Consensus       192 ~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~--~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~  269 (499)
                      +++...|.++.++++..|.   +++.+|.++++  .++.  +.++..+.+      .+.+|+++.++|++|.+.|++++.
T Consensus        87 l~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~--~~~~~~~~~~~~~~~------~~~~v~i~~~~~~tG~~~~~~~l~  155 (350)
T cd00609          87 LVPDPTYPGYEAAARLAGA---EVVPVPLDEEG--GFLLDLELLEAAKTP------KTKLLYLNNPNNPTGAVLSEEELE  155 (350)
T ss_pred             EEcCCCchhHHHHHHHCCC---EEEEEeccccc--CCccCHHHHHhhcCc------cceEEEEECCCCCCCcccCHHHHH
Confidence            9999999999999999999   99999998655  4443  555554433      345788888999999998866555


Q ss_pred             ---HHHHHhCCEEEeeccccchhccCccchh-hhcCCCCCceeEeccccccc-CCCcceEEEEeCchhHHHhhcCCccCC
Q 010842          270 ---EVANEYGIWVHVDAAYAGSACICPEFRH-YLNGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLLVKALSTDPEYL  344 (499)
Q Consensus       270 ---~ia~~~~~~lhvD~A~g~~~~~~~~~~~-~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l~~~~~~~~~yl  344 (499)
                         ++|+++|+|+|+|+||+++......... ...+....|.+..+.||+++ .+.++|+++++++... +.+.....+.
T Consensus       156 ~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~-~~~~~~~~~~  234 (350)
T cd00609         156 ELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELL-ERLKKLLPYT  234 (350)
T ss_pred             HHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHH-HHHHHHHHhc
Confidence               8999999999999999876543211100 11122347888999999998 4567899888774333 2222211111


Q ss_pred             CCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEe
Q 010842          345 KNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRL  424 (499)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~  424 (499)
                      ..                 .........++..++... +++++..++..++++++.+.|++.+...+..++....+++++
T Consensus       235 ~~-----------------~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~  296 (350)
T cd00609         235 TS-----------------GPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDL  296 (350)
T ss_pred             cc-----------------CCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEec
Confidence            00                 001112233344444332 678888899999999999999998655433344445566665


Q ss_pred             cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      .+..         ..+.+.+.+.+.|..+.....+.  +..++|++++.+   ++||++++++|++
T Consensus       297 ~~~~---------~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~---~~~i~~~~~al~~  350 (350)
T cd00609         297 PEGD---------DEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP---EEELEEALERLAE  350 (350)
T ss_pred             CCCC---------hHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC---HHHHHHHHHHhhC
Confidence            4421         12344555656675444333333  567899999643   9999999998863

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi

>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]

Probab=99.91  E-value=1.2e-22  Score=192.57  Aligned_cols=305  Identities=17%  Similarity=0.174  Sum_probs=199.5

Q ss_pred             CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC
Q 010842          118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT  197 (499)
Q Consensus       118 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~  197 (499)
                      ...|...|....+|+.    +++++|. .+        ++|+.+||+||..+|.+...           ++..|++...+
T Consensus        28 ~~~YG~D~~~~~~e~~----~ae~~g~-~a--------~~Fv~sGT~aN~lal~~~~~-----------~~~~vi~~~~a   83 (342)
T COG2008          28 DDVYGEDPTTNALEQR----IAELFGK-EA--------ALFVPSGTQANQLALAAHCQ-----------PGESVICHETA   83 (342)
T ss_pred             CCCCCCCHHHHHHHHH----HHHHhCC-ce--------EEEecCccHHHHHHHHHhcC-----------CCCeEEEeccc
Confidence            4567778877777777    9999998 43        49999999999999998753           66789999999


Q ss_pred             chhHHHH--HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH-HcCCccEEEEEecCCCcccccCC---hhHHHHH
Q 010842          198 HSTFAKV--CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV-EAGLVPLFLCATVGTTSTTAVDN---VEPLAEV  271 (499)
Q Consensus       198 H~s~~ka--~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~-~~g~~p~~vv~t~gtt~~G~id~---l~~I~~i  271 (499)
                      |....++  ...++-    +..++..+..++.|++++++..|..+- -...+|.++..|..| ..|.+-|   |++|.++
T Consensus        84 Hi~~~E~Ga~~~~~~----~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~t-e~GtVy~l~el~~i~~~  158 (342)
T COG2008          84 HIYTDECGAPEFFGG----GQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTAT-EGGTVYPLDELEAISAV  158 (342)
T ss_pred             cceecccCcHHHHcC----CceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccC-CCceecCHHHHHHHHHH
Confidence            9888775  344443    223333332345999999999988621 223456666666655 7899955   5667778


Q ss_pred             HHHhCCEEEeeccccchhc--cCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCC
Q 010842          272 ANEYGIWVHVDAAYAGSAC--ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPS  349 (499)
Q Consensus       272 a~~~~~~lhvD~A~g~~~~--~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~  349 (499)
                      ||++|+.||+|||--..++  ..+..+....   .+||+++.+.|.++.|.  |.+++-+.+...+     ..|......
T Consensus       159 ~k~~~l~LHmDGAR~~nA~valg~~~~~~~~---~~D~v~~~~tK~g~~~~--gAiv~gn~~~~~~-----a~~~rK~~G  228 (342)
T COG2008         159 CKEHGLPLHMDGARLANALVALGVALKTIKS---YVDSVSFCLTKGGGAPV--GAIVFGNRDFAKR-----ARRWRKRAG  228 (342)
T ss_pred             HHHhCCceeechHHHHHHHHHcCCCHHHHHh---hCCEEEEecccCCccee--eeEEEcCHHHHHH-----HHHHHHHhc
Confidence            9999999999998433222  2222222222   49999999999999884  4444445443322     122211110


Q ss_pred             CCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCC
Q 010842          350 ESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPH  429 (499)
Q Consensus       350 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~  429 (499)
                                   ++-|..+-+.+ ..+-++...-+...-.|..++|+.|.+.+.+.||+++..+++.|+|.++++..  
T Consensus       229 -------------gl~~k~r~laA-~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~--  292 (342)
T COG2008         229 -------------GLMRKARFLAA-QGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPES--  292 (342)
T ss_pred             -------------ccHhhhhHHHH-HHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChH--
Confidence                         11112222211 11222233435666677778899999999999999999888999988777532  


Q ss_pred             CCcchhHHHHHHHHHHHHhcCCEEEEeeeECCE-EEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          430 SGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGL-YMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       430 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~-~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                                  ..+.+...|..+..+...... ..+|+++ ++.+|++||++++..++++.
T Consensus       293 ------------~i~~l~~~~~~~~~~~~~~~~~~~vRfvt-s~a~~~edv~~~~~~~~~~~  341 (342)
T COG2008         293 ------------AIEALRLAGALFYRGVLIGAHGEIVRFVT-SWATSEEDVDELVAAIKALL  341 (342)
T ss_pred             ------------HHHHHHhhchhheeeeeccCCCceEEEEe-eccCCHHHHHHHHHHHHHhh
Confidence                        114444445433322112222 4699998 69999999999999998764

>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase

Probab=99.91  E-value=4e-21  Score=195.94  Aligned_cols=299  Identities=14%  Similarity=0.087  Sum_probs=199.2

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      .+..++.+.+++++|.+..         ++++||++|+..++.+..+           ++..|+++...|.++..++++.
T Consensus        83 ~~~~~le~~ia~~~g~~~~---------ii~~~~~~a~~~~~~~l~~-----------~gd~vi~~~~~~~s~~~~~~~~  142 (393)
T TIGR01822        83 DIHKELEAKIAAFLGTEDT---------ILYASCFDANGGLFETLLG-----------AEDAIISDALNHASIIDGVRLC  142 (393)
T ss_pred             HHHHHHHHHHHHHhCCCcE---------EEECchHHHHHHHHHHhCC-----------CCCEEEEeccccHHHHHHHHhc
Confidence            3344444559999997543         7788999998866554421           5678999999999999999888


Q ss_pred             CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccch
Q 010842          209 GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGS  288 (499)
Q Consensus       209 G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~  288 (499)
                      +.   ..+.++       .+|+++|++.|.+..+.+.++.+|+.....+++|.+.|+++|+++|++||+|+++|++|+.+
T Consensus       143 ~~---~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g  212 (393)
T TIGR01822       143 KA---KRYRYA-------NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATG  212 (393)
T ss_pred             CC---ceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCcccc
Confidence            87   654432       47999999999875443335567888878899999999999999999999999999999644


Q ss_pred             hccCccchh--hhcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCC
Q 010842          289 ACICPEFRH--YLNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGT  364 (499)
Q Consensus       289 ~~~~~~~~~--~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~  364 (499)
                      .... ....  ...++ ..+|.++.+.||+++++ ..|+++.+. ... +.+.. ...|...                 +
T Consensus       213 ~~~~-~~~~~~~~~~~~~~~di~~~s~sK~l~g~-r~G~~~~~~-~~~-~~l~~~~~~~~~~-----------------~  271 (393)
T TIGR01822       213 FLGP-TGRGSHELCGVMGRVDIITGTLGKALGGA-SGGFTTARK-EVV-ELLRQRSRPYLFS-----------------N  271 (393)
T ss_pred             CcCC-CCCchHHhcCCCCCCeEEEEEChHHhhCC-CcEEEEeCH-HHH-HHHHHhCccceec-----------------C
Confidence            3211 1111  11222 25899999999998754 468776643 322 22211 1112111                 1


Q ss_pred             CCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHH
Q 010842          365 GRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLL  443 (499)
Q Consensus       365 sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~  443 (499)
                      +.... ...+..++..+  +..+++.++..++++++.+.|++. ++++. ++..+++.+...+         .....++.
T Consensus       272 ~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~---------~~~~~~l~  338 (393)
T TIGR01822       272 SLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAA-GFDIK-PADHPIIPVMLYD---------AVLAQRFA  338 (393)
T ss_pred             CCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC---------HHHHHHHH
Confidence            11111 11223333332  345667788889999999999875 77764 3344566655433         12356788


Q ss_pred             HHHHhcCCEEEEeeeE----CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          444 DWVNSTGRVYLTHTIV----GGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       444 ~~l~~~g~~~~~~~~~----~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +.|.++|+.+ .+..+    .+...+|+++. ..+|++||++++++|+++.+++
T Consensus       339 ~~L~~~gI~v-~~~~~~~~~~~~~~iRis~~-~~~t~edi~~~~~~l~~~~~~~  390 (393)
T TIGR01822       339 RRLLEEGIYV-TGFFYPVVPKGQARIRVQIS-AAHTEEQLDRAVEAFTRIGREL  390 (393)
T ss_pred             HHHHHCCeeE-eeeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHHh
Confidence            8888888543 33222    24456999994 8899999999999999987654

This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.

>cd06502 TA_like Low-specificity threonine aldolase (TA)

Probab=99.90  E-value=2.1e-22  Score=201.03  Aligned_cols=295  Identities=16%  Similarity=0.096  Sum_probs=193.1

Q ss_pred             HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH---HHHH
Q 010842          131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK---VCKL  207 (499)
Q Consensus       131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k---a~~~  207 (499)
                      ..++.+++++++| ++.        .++++|||+|+..++.+...           ++..|+++..+|+++.+   .+++
T Consensus        34 ~~~l~~~~a~~~g-~~~--------~~~~~~gt~a~~~~~~~l~~-----------~gd~v~~~~~~~~~~~~~~~~~~~   93 (338)
T cd06502          34 TAKLEARAAELFG-KEA--------ALFVPSGTAANQLALAAHTQ-----------PGGSVICHETAHIYTDEAGAPEFL   93 (338)
T ss_pred             HHHHHHHHHHHhC-CCe--------EEEecCchHHHHHHHHHhcC-----------CCCeEEEecCcceeeecCCcHHHH
Confidence            4445566999999 433        58999999998888776532           46678889999988664   3556


Q ss_pred             hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHc-CCccEEEEEecCCCccc--ccCChhHHHHHHHHhCCEEEeecc
Q 010842          208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEA-GLVPLFLCATVGTTSTT--AVDNVEPLAEVANEYGIWVHVDAA  284 (499)
Q Consensus       208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~-g~~p~~vv~t~gtt~~G--~id~l~~I~~ia~~~~~~lhvD~A  284 (499)
                      .|+   +++.+|.+.   +.+|+++|++++++..+. ..++.+|+++.++|+.|  ..+++++|+++|+++|+++|+|+|
T Consensus        94 ~g~---~~~~v~~~~---~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea  167 (338)
T cd06502          94 SGV---KLLPVPGEN---GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGA  167 (338)
T ss_pred             cCc---eEEeecCCC---CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechH
Confidence            788   999998753   589999999999753211 11345788888888633  247788999999999999999999


Q ss_pred             ccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCC
Q 010842          285 YAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGT  364 (499)
Q Consensus       285 ~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~  364 (499)
                      |..+....... ........+|+++.++|||++.|.  |.+++.+++...........+                   ..
T Consensus       168 ~~~~~~~~~~~-~~~~~~~~~d~~~~s~sK~~~~~~--g~~~~~~~~~~~~~~~~~~~~-------------------~~  225 (338)
T cd06502         168 RLANAAAALGV-ALKTYKSGVDSVSFCLSKGGGAPV--GAVVVGNRDFIARARRRRKQA-------------------GG  225 (338)
T ss_pred             HHHHHHHhcCC-CHHHHHhcCCEEEEeccccCCCcc--ceEEECCHHHHHHHHHHHHHh-------------------CC
Confidence            85432211110 111111358999999999999875  334444544332211111100                   00


Q ss_pred             CCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHH
Q 010842          365 GRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLD  444 (499)
Q Consensus       365 sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~  444 (499)
                      +.+..++..++++..+...++.+++++..++++++.+.|++. ++.+ .++..+++.++....        .....++.+
T Consensus       226 ~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~~~~v~~~~~--------~~~~~~l~~  295 (338)
T cd06502         226 GMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL-GGLE-SEVQTNIVLLDPVEA--------NAVFVELSK  295 (338)
T ss_pred             ChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CCCc-ccccCCeEEEecCCc--------cHHHHHHHH
Confidence            111223444555555555567778889999999999999988 4443 356778888876432        223344444


Q ss_pred             HHH---hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          445 WVN---STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       445 ~l~---~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      ++.   ++|..+ .+.  .. .++|+++ +..+|++|++++++++++
T Consensus       296 ~l~~~~~~gi~~-~~~--~~-~~lRi~~-~~~~~~~~i~~~~~~l~~  337 (338)
T cd06502         296 EAIERRGEGVLF-YAW--GE-GGVRFVT-HWDTTEEDVDELLSALKA  337 (338)
T ss_pred             HHHHhhhCCEEE-Eec--CC-CeEEEEe-ecCCCHHHHHHHHHHHhc
Confidence            443   567443 221  22 6799999 488899999999998865

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.

>PRK03080 phosphoserine aminotransferase; Provisional

Probab=99.90  E-value=7.7e-22  Score=199.29  Aligned_cols=348  Identities=13%  Similarity=-0.002  Sum_probs=219.0

Q ss_pred             CccccccCCCCCChHHH-HHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEc-CChHHHH
Q 010842           89 SPNFFAFFPATVSTAGF-LGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQ-NTTSDSI  166 (499)
Q Consensus        89 ~p~~~~~~~~~~~~~~~-~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t-~ggt~A~  166 (499)
                      .|.-+-+.|++..++.. +-+.+...+-.+   ...++...++-+++++.+++++|.++..      ..+++ +|||+++
T Consensus        10 ~~~~~~f~~Gp~~~~~~~v~~a~~~~~~~~---~hr~~~f~~~~~~~r~~l~~l~~~~~~~------~v~~~~gs~T~~~   80 (378)
T PRK03080         10 RPADPRFSSGPCKKRPGWQLEALADALLGR---SHRQKPVKALLKRVIEGTRELLSLPEGY------EVGIVPGSDTGAW   80 (378)
T ss_pred             CCCCCCcCCCCcCCChHHHHHHHHhhhccc---CcCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEECCchHHHH
Confidence            34334456666655433 544444322111   1224567788888999999999986431      24655 5888887


Q ss_pred             HHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH--HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842          167 LVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK--VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG  244 (499)
Q Consensus       167 ~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k--a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g  244 (499)
                      -.++.....   +       ++..+++ ...|.+-..  +++.+|+  .+++.++.+.++  .+|+++++.     ++  
T Consensus        81 ~~~~~~l~~---~-------~~~~vi~-~g~f~~~~~~~~~~~~g~--~~v~~~~~~~g~--~~d~~~i~~-----~~--  138 (378)
T PRK03080         81 EMALWSLLG---A-------RRVDHLA-WESFGSKWATDVVKQLKL--EDPRVLEADYGS--LPDLSAVDF-----DR--  138 (378)
T ss_pred             HHHHHhcCC---C-------CcceEEE-eCHHHHHHHHHHHhhcCC--CCceEeccCCCC--CCCHhhcCC-----CC--
Confidence            666544311   0       2334444 456666333  3345555  267777776543  778776432     11  


Q ss_pred             CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceE
Q 010842          245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCC  324 (499)
Q Consensus       245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~  324 (499)
                          .|++++.+|.||.+.|+++|++  |++|++++||++++.+....+-        ..+|.+++++|||++.|.|+|+
T Consensus       139 ----~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv--------~~iD~~~~s~~K~l~~P~G~g~  204 (378)
T PRK03080        139 ----DVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDW--------SKLDVYTFSWQKVLGGEGGHGM  204 (378)
T ss_pred             ----CEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCH--------HHCcEEEEehhhhCCCCCceEE
Confidence                4889999999999999999999  8899999999999887655432        1279999999999999999999


Q ss_pred             EEEeCchhHHHhhcCC-----ccCCCCCCCCCCCcccCCCcccCCCCCCC----c-HHHHHHHHHhcHH-HHHHHHHHHH
Q 010842          325 LWVKQPGLLVKALSTD-----PEYLKNKPSESNSVVDFKDWQVGTGRRFK----S-LRLWMVLRSYGVL-NLQSHIRSDI  393 (499)
Q Consensus       325 l~~r~~~~l~~~~~~~-----~~yl~~~~~~~~~~~~~~~~~~~~sr~~~----a-l~~~~~l~~~g~~-g~~~~~~~~~  393 (499)
                      ++++++. +.+.-...     +.|+.-..     .........+.+....    + ..+..+++.+-.. |++++.+|..
T Consensus       205 l~v~~~~-~~~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~  278 (378)
T PRK03080        205 AILSPRA-VERLESYTPARPIPKFFRLTK-----GGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTA  278 (378)
T ss_pred             EEECHHH-HHhhhcccCCCCCchhheecc-----chHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence            9999753 22211111     11211000     0000000112222211    1 2335577777776 8999999999


Q ss_pred             HHHHHHHHHHhcCCCeEEEcC-C--Cc-eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEec
Q 010842          394 RLAKMFEGFVKSDPRFEIVVP-R--HF-ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAV  469 (499)
Q Consensus       394 ~~a~~l~~~L~~~~~~~~~~~-~--~~-~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~  469 (499)
                      ++++++++.|++.++++++.+ +  .. .+++|++.+..       .....++..++.++|.++..+........+|+++
T Consensus       279 ~l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~-------~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~  351 (378)
T PRK03080        279 ANASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQ-------AAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWC  351 (378)
T ss_pred             HHHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCch-------HHHHHHHHHHHHHcCCeeccccccCCCCcEEEec
Confidence            999999999999987777642 2  22 47788765310       0123345566666665433222111235799998


Q ss_pred             cCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          470 GASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       470 ~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      + .++|++||++++++|+++.+++..
T Consensus       352 ~-~~~t~~di~~l~~al~~~~~~~~~  376 (378)
T PRK03080        352 G-PTVEPADVEALTPWLDWAFERLKA  376 (378)
T ss_pred             C-CCCCHHHHHHHHHHHHHHHHHHhh
Confidence            5 899999999999999998877654

>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn)

Probab=99.90  E-value=1e-21  Score=197.26  Aligned_cols=307  Identities=16%  Similarity=0.151  Sum_probs=201.1

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF  201 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~  201 (499)
                      ..+|...++|+.    +++++|.+.         .++++|||+|+..++.+.+..          ++..|+++..+|.+.
T Consensus        15 ~~~~~~~~~~~~----la~~~~~~~---------~~~~~sgt~al~~~l~~l~~~----------~gd~vl~~~~~~~~~   71 (352)
T cd00616          15 TLGPKVREFEKA----FAEYLGVKY---------AVAVSSGTAALHLALRALGIG----------PGDEVIVPSFTFVAT   71 (352)
T ss_pred             cCCHHHHHHHHH----HHHHhCCCe---------EEEECCHHHHHHHHHHHcCCC----------CCCEEEeCCcchHHH
Confidence            446667777776    888888653         388999999998888766311          466899999999999


Q ss_pred             HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842          202 AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV  281 (499)
Q Consensus       202 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv  281 (499)
                      ..++...|+   +++.++++++ ++.+|+++|++.+++++      .+|+.++   ++|.+.|+++|.++|+++|+++++
T Consensus        72 ~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~------~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~  138 (352)
T cd00616          72 ANAILLLGA---TPVFVDIDPD-TYNIDPELIEAAITPRT------KAIIPVH---LYGNPADMDAIMAIAKRHGLPVIE  138 (352)
T ss_pred             HHHHHHcCC---eEEEEecCCC-cCCcCHHHHHHhcCcCC------eEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEE
Confidence            999999999   9999999763 47999999999885443      3555553   689999999999999999999999


Q ss_pred             eccccchhccCccchhhhcCCCCCceeEec--ccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCC
Q 010842          282 DAAYAGSACICPEFRHYLNGIERVDSFSFS--PHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFK  358 (499)
Q Consensus       282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~--~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~  358 (499)
                      |++|+.+......  . ....  .|..+++  .|||+..+ ..|++++++++...+.... ...+....       ..+.
T Consensus       139 D~a~~~g~~~~~~--~-~~~~--~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~  205 (352)
T cd00616         139 DAAQALGATYKGR--K-VGTF--GDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRDR-------FKYE  205 (352)
T ss_pred             ECCCCCCCeECCE--E-cccC--cceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCCC-------Cccc
Confidence            9999755432211  0 1111  3545555  66999544 4567777765433221110 00000000       0000


Q ss_pred             CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----CceEEEEEecCCCCCCcc
Q 010842          359 DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----HFALVCFRLNPYPHSGSA  433 (499)
Q Consensus       359 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----~~~~v~f~~~~~~~~~~~  433 (499)
                      ......+-+...+.....+.  ..++++++.++..++++++.+.|+++|+++++.++     ...+++|.+.+..     
T Consensus       206 ~~~~~~~~~~~~~~aa~~~~--~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----  278 (352)
T cd00616         206 HEILGYNYRLSEIQAAIGLA--QLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEA-----  278 (352)
T ss_pred             cceeeeccCcCHHHHHHHHH--HHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcC-----
Confidence            11111111223333333333  34678888899999999999999999999987543     2356777775310     


Q ss_pred             hhHHHHHHHHHHHHhcCCEEE---EeeeEC--------------------CEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          434 DTEMLNRKLLDWVNSTGRVYL---THTIVG--------------------GLYMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       434 ~~~~~~~~l~~~l~~~g~~~~---~~~~~~--------------------g~~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                        .....++.+.|.++|+...   .+....                    ....+|+++ ++.+|++||++++++|+
T Consensus       279 --~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~-~~~~t~~di~~i~~~l~  352 (352)
T cd00616         279 --GESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPL-HPSLTEEEIDRVIEALR  352 (352)
T ss_pred             --CCCHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccC-CCCCCHHHHHHHHHHhC
Confidence              0114567777777776221   111000                    025799998 69999999999999874

AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein

>PRK06108 aspartate aminotransferase; Provisional

Probab=99.90  E-value=1.3e-21  Score=198.66  Aligned_cols=326  Identities=14%  Similarity=0.118  Sum_probs=218.4

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCC--CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKL--PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~--~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      ..+.+.+...+......|...++...+++++.+|+.+.+|.  +++       ..++|+|+++|+..++.+..+      
T Consensus        40 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~-------~i~~t~g~~~al~~~~~~l~~------  106 (382)
T PRK06108         40 DFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPE-------RIAVTSSGVQALMLAAQALVG------  106 (382)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcc-------eEEEeCChHHHHHHHHHHhcC------
Confidence            44555555555433345777778899999999999999884  333       468899999998777765532      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCC-CCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVD-ANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT  260 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G  260 (499)
                           ++..|+++.++|..+...++..|+   +++.+|.+.+ ++|.+|+++|++.+.+++      .+|+.+.++|+||
T Consensus       107 -----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~~~~~~------~~i~l~~p~NPtG  172 (382)
T PRK06108        107 -----PGDEVVAVTPLWPNLVAAPKILGA---RVVCVPLDFGGGGWTLDLDRLLAAITPRT------RALFINSPNNPTG  172 (382)
T ss_pred             -----CCCEEEEeCCCccchHHHHHHCCC---EEEEeeCCCCCCCccCCHHHHHHhcCccc------eEEEEECCCCCCC
Confidence                 456788889999999999999999   9999999753 357899999999886533      3677889999999


Q ss_pred             ccC---ChhHHHHHHHHhCCEEEeeccccchhcc-Cccchhhhc--CCCCCceeEecccccccCC-CcceEEEEeCchhH
Q 010842          261 AVD---NVEPLAEVANEYGIWVHVDAAYAGSACI-CPEFRHYLN--GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLL  333 (499)
Q Consensus       261 ~id---~l~~I~~ia~~~~~~lhvD~A~g~~~~~-~~~~~~~~~--g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l  333 (499)
                      .+-   ++++|+++|+++|+|+++|++|+.+... .........  ....-..+..+.+|.++.| ..+|+++.+.. ..
T Consensus       173 ~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~-~~  251 (382)
T PRK06108        173 WTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPA-LG  251 (382)
T ss_pred             cccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHH-HH
Confidence            874   5788999999999999999999876542 111111111  1112346678999988644 56899888542 22


Q ss_pred             HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010842          334 VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI  411 (499)
Q Consensus       334 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~  411 (499)
                       +.+.....+...                 +   ...+...++...+  +.+.+++..++..++++++.+.|++.+++++
T Consensus       252 -~~~~~~~~~~~~-----------------~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~  310 (382)
T PRK06108        252 -QVLEKLIEYNTS-----------------C---VAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEV  310 (382)
T ss_pred             -HHHHHHHHhccc-----------------C---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence             222111111100                 0   0122223333333  3455678888888899999999998888887


Q ss_pred             EcCCCceE-EEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          412 VVPRHFAL-VCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       412 ~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                      .. |..+. +.+++.+..         ...++.++|.+ .|+.+..+..+.  +..++|++++ .  +++++++.++.|+
T Consensus       311 ~~-p~~g~~~~~~l~~~~---------~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~-~--~~~~l~~~l~~l~  377 (382)
T PRK06108        311 AK-PDGAMYAFFRIPGVT---------DSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFA-R--DPARLDEAVERLR  377 (382)
T ss_pred             cC-CCeeEEEEEeCCCCC---------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec-C--CHHHHHHHHHHHH
Confidence            64 44343 444554321         13456676654 565444433332  3578999996 3  7899999999998


Q ss_pred             HHHH
Q 010842          488 EGAD  491 (499)
Q Consensus       488 ~~~~  491 (499)
                      ++.+
T Consensus       378 ~~l~  381 (382)
T PRK06108        378 RFLA  381 (382)
T ss_pred             HHHh
Confidence            7653

>PRK05764 aspartate aminotransferase; Provisional

Probab=99.90  E-value=4.4e-21  Score=195.55  Aligned_cols=336  Identities=15%  Similarity=0.093  Sum_probs=222.2

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ..+.+.+...+......|....+...+++++.+|+.+..|..-..     ...++|+|+++|+..++.+...        
T Consensus        47 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~i~~~~g~~~a~~~~~~~~~~--------  113 (393)
T PRK05764         47 EHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDP-----SQVIVTTGAKQALYNAFMALLD--------  113 (393)
T ss_pred             HHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCH-----HHEEEeCCcHHHHHHHHHHhcC--------
Confidence            345555555554434456666778899999999998887753210     1468999999998877766532        


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-  262 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-  262 (499)
                         ++..|+++..+|..+..+++..|.   +++.+|+++++.|.+|+++|++++++.+      .+|+++.++|+||.+ 
T Consensus       114 ---~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~p~NPtG~~~  181 (393)
T PRK05764        114 ---PGDEVIIPAPYWVSYPEMVKLAGG---VPVFVPTGEENGFKLTVEQLEAAITPKT------KALILNSPSNPTGAVY  181 (393)
T ss_pred             ---CCCEEEecCCCCcchHHHHHHcCC---EEEEEecCcccCCcCCHHHHHHhhCccc------eEEEEECCCCCCCccc
Confidence               456788899999999999999999   9999999865568999999999886543      267888999999998 


Q ss_pred             --CChhHHHHHHHHhCCEEEeeccccchhccCcc---chhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842          263 --DNVEPLAEVANEYGIWVHVDAAYAGSACICPE---FRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA  336 (499)
Q Consensus       263 --d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~---~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~  336 (499)
                        +++++|+++|++||+|+++|.+|+.+.+..+.   ......+....+.+..+..|.++.| ..+|+++.. ++.. +.
T Consensus       182 ~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~-~~~~-~~  259 (393)
T PRK05764        182 SPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGP-KELI-KA  259 (393)
T ss_pred             CHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecC-HHHH-HH
Confidence              45889999999999999999999765432111   1111122223466777889999855 347877743 3322 22


Q ss_pred             hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842          337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP  414 (499)
Q Consensus       337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~  414 (499)
                      +.....+.                    +.....+..+++.+.+.  .+.+++..++..++++++.+.|++++++++..+
T Consensus       260 ~~~~~~~~--------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~  319 (393)
T PRK05764        260 MSKLQSHS--------------------TSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLECPKP  319 (393)
T ss_pred             HHHHHhhc--------------------ccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC
Confidence            21110000                    00112344455555552  455666777777888899999999888887643


Q ss_pred             CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .....+.+.+.+..  ...  .....++.+.+.+ .|+.+..+..+....++|++++   .+++++++++++|.++.++.
T Consensus       320 ~g~~~~~~~~~~~~--~~~--~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~---~~~~~~~~~i~~l~~~~~~~  392 (393)
T PRK05764        320 EGAFYVFPNVSKLL--GKS--ITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYA---TSLEDLEEGLERIERFLESL  392 (393)
T ss_pred             CcceEEEEeccccc--ccc--cCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEec---CCHHHHHHHHHHHHHHHHhh
Confidence            33233444443311  000  0012456666654 5765544444444578999986   36899999999999887643

>PRK05367 glycine dehydrogenase; Provisional

Probab=99.90  E-value=9.2e-21  Score=207.50  Aligned_cols=364  Identities=13%  Similarity=0.096  Sum_probs=234.0

Q ss_pred             hhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHH-HHH------HHHHcccCCccccc
Q 010842           51 PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFL-GEM------LCACFNSVGFNWLA  123 (499)
Q Consensus        51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~------l~~~~n~~~~~~~~  123 (499)
                      |+.++..-+..+| .+.++.++++++.++..+|..   ...|.|.-..+...|+++ ..+      +++ +.+++...++
T Consensus        43 P~~i~~~~~l~lp-~~~sE~e~~~~~~~la~~N~~---~~~~ig~G~y~~~~P~vi~~~i~~~~~~~t~-ytPyQ~EisQ  117 (954)
T PRK05367         43 PASIRLAEPLDLP-AALSEAEALAELRAIASKNKV---FRSYIGQGYYGTHTPPVILRNILENPAWYTA-YTPYQPEISQ  117 (954)
T ss_pred             CHHHhcCCCCCCC-CCCCHHHHHHHHHHHHhcCCC---CCcccCCCCCCCcCcHHHHHHHHhCcchhhc-cCCCChHHHH
Confidence            5667655556777 467999999999998777654   334655333333455544 222      332 3455444444


Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK  203 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k  203 (499)
                      +.....+|.+  .++++++|++..       +..++.++|.+.- ++..++....      + ++.+|++++..|++...
T Consensus       118 G~Leal~~~Q--t~la~LtG~~~a-------naSl~d~aTAa~e-a~~~a~~~~~------~-~~~~vlv~~~~hP~~~~  180 (954)
T PRK05367        118 GRLEALLNFQ--TMVADLTGLEIA-------NASLLDEATAAAE-AMALAKRVSK------S-KSNRFFVDDDVHPQTLD  180 (954)
T ss_pred             HHHHHHHHHH--HHHHHHHCCChh-------hccccccHHHHHH-HHHHhhhhcc------C-CCCEEEEcCccCHHHHH
Confidence            5444445544  779999999865       3588888886544 3333432210      0 13579999999998664


Q ss_pred             H----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842          204 V----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV  279 (499)
Q Consensus       204 a----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l  279 (499)
                      .    ++..|+   +++.+|.+.+    ++        .+      ..+.++.+. ++.+|.+.|+++|+++||++|+++
T Consensus       181 v~~t~a~~~G~---ev~~~~~~~d----~~--------~~------~~~~vlvq~-p~~~G~i~d~~~i~~~ah~~Gal~  238 (954)
T PRK05367        181 VLRTRAEPLGI---EVVVGDAAKA----LD--------HD------DVFGVLLQY-PGTSGEVRDYTALIAAAHARGALV  238 (954)
T ss_pred             HHHHHHHhCCC---EEEEecCccC----CC--------cc------cEEEEEEec-CCCCeeeccHHHHHHHHHHcCCEE
Confidence            4    466788   9999997531    11        11      123444444 567999999999999999999999


Q ss_pred             EeeccccchhccCccchhhhcCCCCCceeEecccccc-----cCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842          280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWL-----LSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV  354 (499)
Q Consensus       280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l-----~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  354 (499)
                      +||+.+.+..++.+.      +--+||.++.++|||+     ++| ++|++++|++  +.+.+   ++-+.+...+..+.
T Consensus       239 ~vda~~~Al~~l~~p------ge~GaDi~vgs~qkfg~P~g~GGP-~aGflavr~~--~~r~l---pgrivG~s~d~~g~  306 (954)
T PRK05367        239 AVAADLLALTLLTPP------GEMGADIAVGSAQRFGVPMGFGGP-HAAYFAVRDA--YKRSM---PGRIVGVSVDAAGN  306 (954)
T ss_pred             EEEehhhhccCCCCh------hhcCCCEEEeeCcccCCCCCCCCC-CEEEEEECHH--HHhhC---CCCeeeeecccCCC
Confidence            999966333222211      1124999999999995     444 4999999975  22222   22222211111111


Q ss_pred             ccCC--Cccc-CCCCCC-------Cc-----HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceE
Q 010842          355 VDFK--DWQV-GTGRRF-------KS-----LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFAL  419 (499)
Q Consensus       355 ~~~~--~~~~-~~sr~~-------~a-----l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~  419 (499)
                      ..+.  -.+- +.-||-       .+     +..++.+.++|..|++++.++...+++++++.|++ +|+++..++.+.+
T Consensus       307 ~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~-~G~~~~~~~~f~~  385 (954)
T PRK05367        307 PALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA-LGLEVVHDSFFDT  385 (954)
T ss_pred             cccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh-cCcccCCCCCCCe
Confidence            1111  0011 111221       11     22233346689999999999999999999999987 5899887777888


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                      ++|++.. .          ..++.++|.++|+..  . .. ....+|+|+ +..+|++||+.++++|.
T Consensus       386 ~~~~~~~-~----------~~~i~~~l~~~gi~~--~-~~-~~~~l~is~-~e~~t~~did~l~~~l~  437 (954)
T PRK05367        386 LTVEVGG-D----------AAAVLARALAAGINL--R-RV-DDDHVGISL-DETTTREDLAALLAVFG  437 (954)
T ss_pred             EEEeCCC-C----------HHHHHHHHHHCCcee--c-cc-cCCEEEEEe-cccCCHHHHHHHHHHHc
Confidence            8888632 2          467888888888544  1 11 124599999 59999999999999996

>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I)

Probab=99.90  E-value=1.1e-20  Score=189.60  Aligned_cols=337  Identities=11%  Similarity=0.002  Sum_probs=211.9

Q ss_pred             CCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHH
Q 010842           86 HWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDS  165 (499)
Q Consensus        86 ~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A  165 (499)
                      .+.+.-|+|+-.. +.....+.+.+....++. ..+....+......++.+.+++++|.+..         +++++||++
T Consensus         5 ~~~~~~~~~~~~~-~~v~~a~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~~~~~---------iv~~sg~~a   73 (349)
T cd06454           5 NFCSNDYLGLANH-PEVIEAAKEALDKYGVGA-GGSRLISGTSDLHEELEEELAEFHGKEAA---------LVFSSGYAA   73 (349)
T ss_pred             ecccCCccccCCC-HHHHHHHHHHHHHhCCCC-CCcCeecCCchHHHHHHHHHHHHhCCCCE---------EEeccHHHH
Confidence            3455567776422 333334444444322211 11111112344555566668999987543         778888999


Q ss_pred             HHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCC
Q 010842          166 ILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGL  245 (499)
Q Consensus       166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~  245 (499)
                      ++.++.+..+           ++..|+++...|.++..+++..|+   .++.++       .+|++.+++.+++.. ...
T Consensus        74 ~~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~~~-------~~~~~~le~~i~~~~-~~~  131 (349)
T cd06454          74 NDGVLSTLAG-----------KGDLIISDSLNHASIIDGIRLSGA---KKRIFK-------HNDMEDLEKLLREAR-RPY  131 (349)
T ss_pred             HHHHHHHhcC-----------CCCEEEEehhhhHHHHHHHHHcCC---ceEEec-------CCCHHHHHHHHHHhh-ccC
Confidence            8877765532           466788899999999999999998   888775       247889999987643 123


Q ss_pred             ccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchh--hh-cCCCCCceeEecccccccCCCcc
Q 010842          246 VPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH--YL-NGIERVDSFSFSPHKWLLSYLDC  322 (499)
Q Consensus       246 ~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~--~~-~g~~~aDsi~~~~hK~l~~p~~~  322 (499)
                      ++.+|+++.+++++|.+.|+++|+++|+++|+++++|++|+.+... +....  .. ......|+++.+.||+++.+ + 
T Consensus       132 ~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-g-  208 (349)
T cd06454         132 GKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYG-PHGRGVEEFGGLTDDVDIIMGTLGKAFGAV-G-  208 (349)
T ss_pred             CCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccC-CCCCChhhhccccccCcEEEeechhhhccc-C-
Confidence            4567888889999999999999999999999999999999744321 11000  11 12235799999999999864 3 


Q ss_pred             eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC-CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 010842          323 CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR-FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEG  401 (499)
Q Consensus       323 g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~  401 (499)
                      |+++.+ +..+.........+...                 .+.. .....+..+++.+..  ++...++..++++++.+
T Consensus       209 G~i~~~-~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~  268 (349)
T cd06454         209 GYIAGS-KELIDYLRSYARGFIFS-----------------TSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRR  268 (349)
T ss_pred             CEEECC-HHHHHHHHHhchhhhcc-----------------CCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHH
Confidence            665544 33332221111111110                 0100 112233344444322  45677888899999999


Q ss_pred             HHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee---ECCEEEEEEeccCCCCcHHH
Q 010842          402 FVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI---VGGLYMLRFAVGASLTDERH  478 (499)
Q Consensus       402 ~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lRi~~~~~~~t~~d  478 (499)
                      .|++. +++++.++...++++...+         .....++.+.|.++|+.+.....   ..+..++|+++. ..++++|
T Consensus       269 ~l~~~-g~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~-~~~~~~~  337 (349)
T cd06454         269 GLKEL-GFPVGGSPSHIIPPLIGDD---------PAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLS-AAHTKED  337 (349)
T ss_pred             HHHhc-CCcccCCCCCcEEEEeCCC---------hHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEe-CCCCHHH
Confidence            99887 7776655444444443321         12246788888888865433211   112368999995 7789999


Q ss_pred             HHHHHHHHHHH
Q 010842          479 VVAAWELIMEG  489 (499)
Q Consensus       479 i~~l~~~l~~~  489 (499)
                      +++++++|+++
T Consensus       338 i~~~~~~l~~~  348 (349)
T cd06454         338 IDRLLEALKEV  348 (349)
T ss_pred             HHHHHHHHHHh
Confidence            99999999875

The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.

>PLN02414 glycine dehydrogenase (decarboxylating)

Probab=99.89  E-value=2.4e-20  Score=203.20  Aligned_cols=366  Identities=11%  Similarity=0.016  Sum_probs=232.8

Q ss_pred             hhHHHhcCCCCCCC--CCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHH------HcccCCcccc
Q 010842           51 PGFLRSALPDSAPH--RPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCA------CFNSVGFNWL  122 (499)
Q Consensus        51 ~~~l~~~~~~~~p~--~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~------~~n~~~~~~~  122 (499)
                      |+.++.. +..+|+  .+.++.++++++.++...|..   +..|.|.-+.+..+|+.+-+.+.+      .+.+++.  +
T Consensus        68 P~~i~~~-~l~lp~~~~~~sE~e~~~~~~~la~kN~~---~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqa--E  141 (993)
T PLN02414         68 PKSIRLD-SMKLSKYDEGLTESQMLEHMKSLASKNKV---FKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQA--E  141 (993)
T ss_pred             CHHHhcC-CCCCCCCCCCCCHHHHHHHHHHHHhcCCc---cccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCch--H
Confidence            4555433 456772  578999999999998776654   445666444444455555333321      1233332  2


Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      .+.+.-+.-.+...++++|+|++.+       +..++.++|.+.-.++++.+...       | ++.+|++++..|++..
T Consensus       142 isQG~lqal~~~Qt~ia~LtG~~~a-------naSL~d~aTAaaea~~~a~~~~~-------g-~~~~VlVs~~~hP~~~  206 (993)
T PLN02414        142 IAQGRLESLLNYQTMITDLTGLPMS-------NASLLDEGTAAAEAMAMCNNILK-------G-KKKKFLIASNCHPQTI  206 (993)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCChh-------hEeecCChHHHHHHHHHHHhccc-------C-CCCEEEEcCccCHhHH
Confidence            2333333344455779999999865       46899998876543333332110       1 2457999999999976


Q ss_pred             HHH----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 KVC----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                      ..+    +..|+   +++.+|.+..     +      ...+      ..+.++ ++-.+.+|.+.|+++|+++||++|++
T Consensus       207 ~v~~t~a~~~Gi---eV~~v~~~~~-----~------~~~~------~v~~vl-vq~P~~~G~v~dv~~I~~~ah~~GaL  265 (993)
T PLN02414        207 DVCQTRADGLGL---EVVVADEKDF-----D------YSSG------DVCGVL-VQYPATDGEVLDYAEFVKNAHANGVK  265 (993)
T ss_pred             HHHHHhhhhcCC---EEEEecchhh-----c------cccC------ceEEEE-EecCCCCeEEcCHHHHHHHHHHcCCE
Confidence            554    44688   8999987521     1      0011      122333 55556699999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccc-----cCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWL-----LSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS  353 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l-----~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~  353 (499)
                      ++| +|+..+........     --+||+++.++|||+     ++|. +|++++|++.  .+   ..|+.+.+...+..+
T Consensus       266 ~iV-aad~lal~~l~~pg-----e~GADi~vgsgqKwg~P~G~GGP~-aGflavr~~~--~r---~~PgriVG~s~d~~g  333 (993)
T PLN02414        266 VVM-ATDLLALTMLKPPG-----EWGADIVVGSAQRFGVPMGYGGPH-AAFLATSQEY--KR---LMPGRIIGVSVDSSG  333 (993)
T ss_pred             EEE-EECHHHhcCCCCHh-----hccCcEEEECCCccccCCCCCCCC-eeEEEECHHH--Hh---hCCCcccCcccCCCC
Confidence            999 77766554442111     114999999999998     4444 8999999853  22   233322222222111


Q ss_pred             cccCC---CcccCCCCCC-------CcHHHHHHH-----HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce
Q 010842          354 VVDFK---DWQVGTGRRF-------KSLRLWMVL-----RSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA  418 (499)
Q Consensus       354 ~~~~~---~~~~~~sr~~-------~al~~~~~l-----~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~  418 (499)
                      ...+.   ....+..||-       ....+++++     ..+|..|++++.++..++++++++.|++ +|+++..++.+.
T Consensus       334 ~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~-~G~~~~~~~~f~  412 (993)
T PLN02414        334 KPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKK-LGFQVQSLPFFD  412 (993)
T ss_pred             CcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhh-cCCccCCCCCcC
Confidence            11110   0111111221       123444443     3468899999999999999999999987 479988888888


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      +++|++..            ..++.++|.++|+.+ ..  .. ...+|+|+ +..+|++|||.++++|..
T Consensus       413 ~vt~~~~~------------~~~v~~~L~~~gI~l-~~--~~-~~~lrvs~-~e~~T~edId~L~~~l~~  465 (993)
T PLN02414        413 TVKVKCSD------------ADAIADAAAKVGINL-RV--VD-ANTVTVSF-DETTTLEDVDKLFKVFAG  465 (993)
T ss_pred             eEEEecCC------------HHHHHHHHHHCCCee-EE--ec-CCeEEEEe-eccCCHHHHHHHHHHHcc
Confidence            99998732            366788888888632 21  11 23599999 599999999999999963

>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=99.89  E-value=4.5e-21  Score=187.71  Aligned_cols=329  Identities=16%  Similarity=0.128  Sum_probs=229.9

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ....+.+...+..+  ....+|...+||++    +++.+|.+..         +.+++||.|+.++|.+.--        
T Consensus        15 ~~e~~~v~~vl~sg--~i~~G~~v~~FE~~----~ae~~G~k~a---------va~~sgT~AL~laL~al~i--------   71 (374)
T COG0399          15 EEELAAVQEVLKSG--WLTGGPFVRRFEQA----FAEYLGVKYA---------VAVSSGTAALHLALLALAI--------   71 (374)
T ss_pred             hHHHHHHHHHHHcC--CeecChHHHHHHHH----HHHHhCCCeE---------EEecChHHHHHHHHHhcCC--------
Confidence            33444555656543  23448999999998    9999999875         9999999999999986521        


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD  263 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id  263 (499)
                        .++++|+++..++.+..+++-+.|+   .+++|++|++ +|.||++.||++|+++++      +|+..+   ..|..-
T Consensus        72 --g~GDeVI~ps~TfvATan~i~~~Ga---~PVFvDid~~-T~nid~~~ie~aIt~~tK------AIipVh---l~G~~~  136 (374)
T COG0399          72 --GPGDEVIVPSFTFVATANAVLLVGA---KPVFVDIDPD-TLNIDPDLIEAAITPRTK------AIIPVH---LAGQPC  136 (374)
T ss_pred             --CCCCEEEecCCchHHHHHHHHHcCC---eEEEEecCCc-ccCCCHHHHHHHcccCCe------EEEEeh---hccCCC
Confidence              1678999999999999999999999   9999999986 589999999999998765      566665   578888


Q ss_pred             ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcC-CCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCcc
Q 010842          264 NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNG-IERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPE  342 (499)
Q Consensus       264 ~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g-~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~  342 (499)
                      |+++|.+||++||++++.|+|++.+..    ++....| +..+-+++|-++|.+.+. ..|+++++|++...+.......
T Consensus       137 dm~~i~~la~~~~l~vIEDaAqa~Ga~----y~gk~vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~h  211 (374)
T COG0399         137 DMDAIMALAKRHGLPVIEDAAQAHGAT----YKGKKVGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNH  211 (374)
T ss_pred             CHHHHHHHHHHcCCeEEEEcchhccCe----ecCcccccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHh
Confidence            999999999999999999999987653    3333333 455778999999999876 8899999987655433211110


Q ss_pred             CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce----
Q 010842          343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA----  418 (499)
Q Consensus       343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~----  418 (499)
                      -....     .  .+..+....|...+.-.+-+++.....+.++++.++..++++++.+.|++.+++.+..++...    
T Consensus       212 G~~~~-----~--~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~  284 (374)
T COG0399         212 GLSRD-----A--VFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAW  284 (374)
T ss_pred             CcCCC-----c--cccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeee
Confidence            01000     0  111112233444444444445555555899999999999999999999999887665443322    


Q ss_pred             -EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCE---EEEeeeE---------C-----------CEEEEEEeccCCCC
Q 010842          419 -LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRV---YLTHTIV---------G-----------GLYMLRFAVGASLT  474 (499)
Q Consensus       419 -~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~~---------~-----------g~~~lRi~~~~~~~  474 (499)
                       ....++.+.        ......+.+.|.+.|+.   +..+...         .           ....+++=+ +|..
T Consensus       285 ~~~~i~~~~~--------~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~-~p~l  355 (374)
T COG0399         285 HLYTILVDEE--------GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPL-HPNL  355 (374)
T ss_pred             eeeEEEecCC--------CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccC-CCCC
Confidence             222223221        11245677777777542   2121000         0           123455544 7999


Q ss_pred             cHHHHHHHHHHHHHHHH
Q 010842          475 DERHVVAAWELIMEGAD  491 (499)
Q Consensus       475 t~~di~~l~~~l~~~~~  491 (499)
                      +.+|+++++++|+++..
T Consensus       356 ~~~~~~~V~~~l~~~~~  372 (374)
T COG0399         356 SEEDVDRVIEALKEVLG  372 (374)
T ss_pred             CHHHHHHHHHHHHHHhc
Confidence            99999999999998764

>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]

Probab=99.89  E-value=1.4e-20  Score=180.57  Aligned_cols=383  Identities=14%  Similarity=0.096  Sum_probs=252.2

Q ss_pred             CCCCCCHHHHHHHHHhhhcCCCCCCCCccccc-----cCCCCCChHHHHHHHHHHHcccCCc-ccccChhhHHHHHHHHH
Q 010842           63 PHRPESFETILKDVQEKIIPGITHWLSPNFFA-----FFPATVSTAGFLGEMLCACFNSVGF-NWLASPASTELEIVVMD  136 (499)
Q Consensus        63 p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~-----~~~~~~~~~~~~~~~l~~~~n~~~~-~~~~~p~~~~lE~~~~~  136 (499)
                      |....++-++++.+.++-..+..-.....-+|     |.|.....|...-    .+-|...+ .-++..+..++-.++.+
T Consensus        41 ~~Pe~SE~e~~Rh~~rLs~kn~avd~~m~PLGSCTMK~Np~~e~~~~~~p----~f~~iHP~~pe~~vqG~l~li~~Lq~  116 (496)
T COG1003          41 PLPEHSETEMVRHYTRLSQKDLAVDRGMIPLGSCTMKLNPKAEMKPATWP----EFANIHPFQPEEQVQGYLELIYELQE  116 (496)
T ss_pred             CCccccHHHHHHHHHHHHhcccccccCccCCcccccccCchhhccccccc----chhhcCCCCChHHHHHHHHHHHHHHH
Confidence            33346888999999887655543322222233     2111111111111    11121111 12344567788899999


Q ss_pred             HHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCCchhHHHHHHHhCCCCCCe
Q 010842          137 WLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHSTFAKVCKLAGVSPANI  215 (499)
Q Consensus       137 ~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~H~s~~ka~~~~G~g~~~v  215 (499)
                      ||+++.|++.-.        +--..|+++-+++|++.|.....+    |. .+.+|++++.+|-.-.-.+.+.|+   +|
T Consensus       117 ~L~~ITG~Davs--------LQP~AGAqGE~aGll~Ir~YHe~r----G~~~R~~~LIP~SAHGTNPASAam~G~---~V  181 (496)
T COG1003         117 WLKEITGMDAVS--------LQPNAGAQGEYAGLLAIRAYHESR----GEGHRNICLIPDSAHGTNPASAAMAGF---KV  181 (496)
T ss_pred             HHHHhcCCceee--------ccCCCCcchhhHHHHHHHHHHHHc----CCCcCcEEEeeccccCCChhhHhhcCc---eE
Confidence            999999998742        444567788888888887655432    22 577899999999999999999999   99


Q ss_pred             EEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-CChhHHHHHHHHhCCEEEeeccccchhccCcc
Q 010842          216 RALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-DNVEPLAEVANEYGIWVHVDAAYAGSACICPE  294 (499)
Q Consensus       216 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~  294 (499)
                      +.|+++++|  .+|+++|++++.++++      ++.+|.++| .|.+ .+|.+|+++.|++|-.|..|||---..+-  .
T Consensus       182 V~V~~~~~G--~VDlddLk~k~~~~~A------alMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG--~  250 (496)
T COG1003         182 VVVKCDENG--NVDLDDLRAKAEDNLA------ALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVG--L  250 (496)
T ss_pred             EEEecCCCC--CccHHHHHHHhcccee------EEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhc--c
Confidence            999999876  9999999999997775      788899887 7888 67999999999999999999985332221  1


Q ss_pred             chhhhcCCCCCceeEecccccccCCCc-----ceEEEEeCchhHHHhhcCCccCCCCCCC--CCCC-cccC-CCcccCCC
Q 010842          295 FRHYLNGIERVDSFSFSPHKWLLSYLD-----CCCLWVKQPGLLVKALSTDPEYLKNKPS--ESNS-VVDF-KDWQVGTG  365 (499)
Q Consensus       295 ~~~~~~g~~~aDsi~~~~hK~l~~p~~-----~g~l~~r~~~~l~~~~~~~~~yl~~~~~--~~~~-~~~~-~~~~~~~s  365 (499)
                      .+   .|--++|++-++.||++.+|-|     .|-+.++..  +       ++||.....  +... ..+. ...++.-+
T Consensus       251 ~r---PGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~--L-------~pfLP~p~~~~~~~~y~~~~~~~~s~g~~  318 (496)
T COG1003         251 AR---PGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAH--L-------APFLPGPVVYHDVGEYRLDYDGKKSIGVS  318 (496)
T ss_pred             cc---ccccccceEEeecccccccCCCCCCCCCCceehHhh--c-------cccCCCCcccCCCccccccCCCCccceee
Confidence            11   1223599999999999988744     566777642  3       234433110  0000 0010 01112222


Q ss_pred             CCC----C-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC---ceEEEEEecCCCCCCcchhHH
Q 010842          366 RRF----K-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH---FALVCFRLNPYPHSGSADTEM  437 (499)
Q Consensus       366 r~~----~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~  437 (499)
                      ..+    . -...|+.++.+|.+|+++.-+...-+|+|+.++|+.  .++++..+.   ...+.+...+....    ...
T Consensus       319 ~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~--~y~~~y~~~~~~~HE~ild~r~l~~~----~Gv  392 (496)
T COG1003         319 AAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG--YYPVPYTGENRVAHECILDARPLKKE----TGV  392 (496)
T ss_pred             ccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh--cCccccCCCCcceeEEEeechHhHhh----cCC
Confidence            222    1 147899999999999999999999999999999986  466654333   34455554432100    111


Q ss_pred             HHHHHHHHHHhcCCEEEEeeeEC---CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842          438 LNRKLLDWVNSTGRVYLTHTIVG---GLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       438 ~~~~l~~~l~~~g~~~~~~~~~~---g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~  496 (499)
                      ....+.++|..-|  |-.+|...   -...+=|=.+ ..-+++++|++++++.++.++..+.
T Consensus       393 ~~~DvAKrLlD~G--fHaPT~~FPliV~~tLMIEPT-EsEsk~eLDrf~dami~I~~Ea~~~  451 (496)
T COG1003         393 RALDVAKRLLDYG--FHAPTMYFPLIVAGTLMIEPT-ESESKEELDRFIDAMIAIREEADAV  451 (496)
T ss_pred             cHHHHHHHHHhcC--CCCCcccCccccccceeecCC-CCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            2455677777778  44444322   2244555554 6778999999999999999887554

>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme

Probab=99.89  E-value=1.5e-20  Score=188.71  Aligned_cols=321  Identities=15%  Similarity=0.082  Sum_probs=198.0

Q ss_pred             hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      +|..+.+.+..+.+.    |.   ....+.+++.+++++++|.+.         .++|+|+|+|+..++.+....- .+.
T Consensus        25 ~~~~v~~a~~~~~~~----~~---~~~~~~~~~~~~~a~~~g~~~---------~~~~~g~t~al~~al~al~~~G-d~~   87 (363)
T TIGR01437        25 VSDEVADAQKRGAQN----YF---EIKELVNKTGEYIANLLGVED---------AVIVSSASAGIAQSVAAVITRG-NRY   87 (363)
T ss_pred             CCHHHHHHHHHHHhc----CC---CHHHHHHHHHHHHHHhhCCCe---------EEEEcCHHHHHHHHHHHHhcCC-Ccc
Confidence            555555655555432    11   135667778888999999764         3999999999999988764310 000


Q ss_pred             h---hh--ccCCeEEEcCCCCchh-----HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEE
Q 010842          182 G---AE--NMHKLVVYGSDQTHST-----FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLC  251 (499)
Q Consensus       182 ~---~~--g~~~~~i~~s~~~H~s-----~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv  251 (499)
                      .   .+  -.++..|+++. .|+.     +..++.+.|+   .++.++++    +.+|+++++++|.++++     .+++
T Consensus        88 ~~~~~~~s~~~~~eVi~~~-~~~~~~~~~~~~~~~~~g~---~~v~v~~~----~~~d~~~le~ai~~~t~-----ai~~  154 (363)
T TIGR01437        88 LVENLHDSKIEVNEVVLPK-GHNVDYGAPVETMVRLGGG---KVVEAGYA----NECSAEQLEAAITEKTA-----AILY  154 (363)
T ss_pred             hhhcccccccccceEEEEC-ccchhcCCchHHHHHhcCC---eEEEEcCC----CCCCHHHHHHhcChhce-----EEEE
Confidence            0   00  00223566665 4433     3567788899   89888763    37999999999988775     2344


Q ss_pred             EecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCch
Q 010842          252 ATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPG  331 (499)
Q Consensus       252 ~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~  331 (499)
                      ++.+++++|.+.|+++|+++|++||+++|+|+||+...      .... .+ ++|.+++++||++++|. .|+++.++ +
T Consensus       155 v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~------~~~~-~~-g~D~~~~S~~K~l~gp~-~G~l~~~~-~  224 (363)
T TIGR01437       155 IKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL------QKYY-RL-GADLVIYSGAKAIEGPT-SGLVLGKK-K  224 (363)
T ss_pred             EecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch------HHHH-Hc-CCCEEEEeCCcccCCCc-eEEEEEcH-H
Confidence            56677889999999999999999999999999997211      1101 11 38999999999999886 78776543 3


Q ss_pred             hHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010842          332 LLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI  411 (499)
Q Consensus       332 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~  411 (499)
                      .+.. ...   +.....      .     ..+.+. ...+.+..++..+-..+ .+.+++..+.++++.+.|+++|++++
T Consensus       225 ~i~~-~~~---~~~~~~------~-----~~~~~~-~~~~gl~aAl~~~~~~~-~~~~~~~~~~~~~l~~~L~~i~g~~~  287 (363)
T TIGR01437       225 YIEW-VKL---QSKGIG------R-----AMKVGK-ENILGLTAALEQYLSTG-KESGAEMVAKLTPFIEALNTLKGVSA  287 (363)
T ss_pred             HHHH-HHh---ccCCCc------c-----eeccCH-HHHHHHHHHHHHHHccC-cccHHHHHHHHHHHHHHHhcCCCeEE
Confidence            3321 111   110000      0     001110 01244455555543222 23333444567789999999999988


Q ss_pred             EcCCC-------ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHH
Q 010842          412 VVPRH-------FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWE  484 (499)
Q Consensus       412 ~~~~~-------~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~  484 (499)
                      ..++.       ...+.|.....+        ....++.+.|.+.+.-+.....+...+.+|+.+.  .++++|++.+++
T Consensus       288 ~~~~~~~~~~~~~~~v~~~~~~~g--------~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~--~~~~~e~~~~~~  357 (363)
T TIGR01437       288 SIVQDEAGRDIARAEIRFDESELG--------MTAADVVQALRQGEPAIYTRGYKANEGIIEIDPR--SVTGGQLDIIVE  357 (363)
T ss_pred             EEecCCCCCcCceEEEEEeccCCC--------CCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEee--cCCHHHHHHHHH
Confidence            74221       122334331111        1146677778776743333322334456787774  367999999999


Q ss_pred             HHHHH
Q 010842          485 LIMEG  489 (499)
Q Consensus       485 ~l~~~  489 (499)
                      +|+++
T Consensus       358 ~l~~~  362 (363)
T TIGR01437       358 RIREI  362 (363)
T ss_pred             HHHHh
Confidence            99875

This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.

>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]

Probab=99.89  E-value=1.2e-20  Score=186.16  Aligned_cols=337  Identities=17%  Similarity=0.118  Sum_probs=232.2

Q ss_pred             CCCCCCCccccccCCCCCChHHHHHHHHHHH-cccCCc--ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEc
Q 010842           83 GITHWLSPNFFAFFPATVSTAGFLGEMLCAC-FNSVGF--NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQ  159 (499)
Q Consensus        83 ~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~n~~~~--~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t  159 (499)
                      ..++|.+-.|+|.-..+. ....+.+.+..+ ....+.  .....+...+||++    +++++|.+..         ++.
T Consensus        40 ~~~nf~SNdYLGLa~~~~-~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~----lA~f~g~e~a---------l~f  105 (388)
T COG0156          40 KVLNFCSNDYLGLASHPE-LIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEE----LADFLGAEAA---------LLF  105 (388)
T ss_pred             eeEeeeccCcccccCCHH-HHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHH----HHHHhCCCcE---------EEE
Confidence            345677778888753322 222222223321 111111  12233455666766    9999999875         888


Q ss_pred             CChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHH
Q 010842          160 NTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEA  239 (499)
Q Consensus       160 ~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~  239 (499)
                      ++|-.||+..+.+...           ++.+|+..+..|.|+..++++.+.   +++..+.       .|+++||+.+++
T Consensus       106 ~SGy~AN~~~i~~l~~-----------~~dli~~D~lnHASiidG~rls~a---~~~~f~H-------nD~~~Le~~l~~  164 (388)
T COG0156         106 SSGFVANLGLLSALLK-----------KGDLIFSDELNHASIIDGIRLSRA---EVRRFKH-------NDLDHLEALLEE  164 (388)
T ss_pred             cccchhHHHHHHHhcC-----------CCcEEEEechhhhhHHHHHHhCCC---cEEEecC-------CCHHHHHHHHHh
Confidence            8889999877776643           577899999999999999999999   8888763       589999999998


Q ss_pred             HHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhh--cCCC--CCceeEeccccc
Q 010842          240 DVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL--NGIE--RVDSFSFSPHKW  315 (499)
Q Consensus       240 ~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~--~g~~--~aDsi~~~~hK~  315 (499)
                      ....+.++.+|+.-...++.|.+.||++|.+++++|+.|+.||.||+.+.+ .+.-+...  .|+.  ..|.++.+.-|.
T Consensus       165 ~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~-G~~GrG~~e~~g~~~~~vdi~~gTlsKA  243 (388)
T COG0156         165 ARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVL-GPNGRGLAEHFGLEPEEVDIIVGTLGKA  243 (388)
T ss_pred             hhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEcccccccc-CCCCccHHHHhCCCCccceEEEEEchhh
Confidence            654332566788888889999999999999999999999999999987754 33333322  2443  358999999999


Q ss_pred             ccCCCcceEEEEeCchhHHHhh-cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHH
Q 010842          316 LLSYLDCCCLWVKQPGLLVKAL-STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIR  394 (499)
Q Consensus       316 l~~p~~~g~l~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~  394 (499)
                      ++.   .|.++.-+.. +.+.+ ....+|++...-                .+..+..+..+++.+  +...++.++..+
T Consensus       244 lGs---~Gg~v~g~~~-~~d~L~~~ar~~ifStal----------------pP~~aaa~~~al~~l--~~~~~~r~~L~~  301 (388)
T COG0156         244 LGS---SGGYIAGSAA-LIDYLRNRARPFIFSTAL----------------PPAVAAAALAALRIL--EEGPERRERLQE  301 (388)
T ss_pred             hcc---cCceeeCcHH-HHHHHHHhCCceeccCCC----------------CHHHHHHHHHHHHHH--HhCHHHHHHHHH
Confidence            983   4444444443 33333 335667665421                111233344455554  344567778888


Q ss_pred             HHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE---EEeeeECCEEEEEEeccC
Q 010842          395 LAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY---LTHTIVGGLYMLRFAVGA  471 (499)
Q Consensus       395 ~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~g~~~lRi~~~~  471 (499)
                      ++.++++.++.. ++.+ .+...+++.+.+.+         +....++...|.++|+..   ..|+...|...+|++++ 
T Consensus       302 ~~~~~~~~~~~~-~~~~-~~s~s~I~pv~~gd---------~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lt-  369 (388)
T COG0156         302 LAAFFRSLLKAL-GLVL-LPSESPIIPVILGD---------EERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLT-  369 (388)
T ss_pred             HHHHHHHHHHhc-CCcc-CCCCCCeeeeEeCC---------HHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEec-
Confidence            888888666654 5554 35667788777755         344677788888887532   23666788889999995 


Q ss_pred             CCCcHHHHHHHHHHHHHH
Q 010842          472 SLTDERHVVAAWELIMEG  489 (499)
Q Consensus       472 ~~~t~~di~~l~~~l~~~  489 (499)
                      ..+|++||+.+++++.++
T Consensus       370 a~ht~~~I~~l~~~l~~~  387 (388)
T COG0156         370 AAHTEEDIDRLAEALSEV  387 (388)
T ss_pred             CCCCHHHHHHHHHHHHhh
Confidence            889999999999999875

>PRK06207 aspartate aminotransferase; Provisional

Probab=99.88  E-value=1.2e-19  Score=185.28  Aligned_cols=331  Identities=13%  Similarity=0.079  Sum_probs=216.8

Q ss_pred             HHHHHHHHccc-CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842          106 LGEMLCACFNS-VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE  184 (499)
Q Consensus       106 ~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~  184 (499)
                      +.+.+...++. ....|....+...+.+++.+|+++.+|.+.+.    ....++|+|+++++..++.+..+         
T Consensus        58 ~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~----~~~I~it~Ga~~al~~~~~~l~~---------  124 (405)
T PRK06207         58 AFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDA----ADELIITPGTQGALFLAVAATVA---------  124 (405)
T ss_pred             HHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCcHHHHHHHHHHhcC---------
Confidence            33334444432 23456666678899999999999999964210    01468999999988777765532         


Q ss_pred             ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC---CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS---VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~---~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                        ++..|++..++|+.+...++.+|.   +++.||++   .+.++.+|+++|++++.+.++      +|+.+.++||||.
T Consensus       125 --~Gd~Vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k------~v~l~~P~NPTG~  193 (405)
T PRK06207        125 --RGDKVAIVQPDYFANRKLVEFFEG---EMVPVQLDYLSADKRAGLDLDQLEEAFKAGVR------VFLFSNPNNPAGV  193 (405)
T ss_pred             --CCCEEEEeCCCchhHHHHHHHcCC---EEEEEeccccCcccCCCcCHHHHHHhhhhcCe------EEEECCCCCCCCc
Confidence              567888899999999999999999   99999986   233479999999999866433      7889999999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhc-CC-CCCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842          262 VDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN-GI-ERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK  335 (499)
Q Consensus       262 id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~-g~-~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~  335 (499)
                      +-+   +++|+++|++||+|+++|.+|+.+.+.......... .. ..--.++.++.|.++.| .-+|+++... ... +
T Consensus       194 ~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~-~l~-~  271 (405)
T PRK06207        194 VYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSP-AII-D  271 (405)
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCH-HHH-H
Confidence            966   778899999999999999999876432211111110 10 11125677789999855 4488886543 322 2


Q ss_pred             hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                      .+.....+....                    ...+...+....+  +...+++.+++..+.++.+.+.|++++++++..
T Consensus       272 ~~~~~~~~~~~~--------------------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~  331 (405)
T PRK06207        272 RMEKLQAIVSLR--------------------AAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVRA  331 (405)
T ss_pred             HHHHHHhHhccC--------------------CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceecC
Confidence            222211111000                    0112222333333  334467778888888889999998887887653


Q ss_pred             CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      +.....+++++.+..      .  ....+.++|. +.|+.+..+..+.  +..++|++++   .+.+++++.+++|.++.
T Consensus       332 p~gg~fl~~~l~~~~------~--~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~---~~~~~l~~al~rl~~~l  400 (405)
T PRK06207        332 PQAGSYLFPRLPRLA------V--SLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFS---QDHAAAVAAAERIAQLI  400 (405)
T ss_pred             CCeeEEEEEeCcccC------C--CHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEec---CCHHHHHHHHHHHHHHH
Confidence            333445555554311      0  1345667775 4676555444442  3568999997   25789999999998887


Q ss_pred             HHH
Q 010842          491 DRL  493 (499)
Q Consensus       491 ~~l  493 (499)
                      +++
T Consensus       401 ~~~  403 (405)
T PRK06207        401 ERY  403 (405)
T ss_pred             HHh
Confidence            654

>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.88  E-value=9.1e-20  Score=187.13  Aligned_cols=340  Identities=11%  Similarity=0.028  Sum_probs=221.5

Q ss_pred             HHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842          106 LGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE  184 (499)
Q Consensus       106 ~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~  184 (499)
                      +.+.+...+..+ ...|....+..++++++.+++.+..|.+-+.     ...++|+|+|+|+.+++.+..+         
T Consensus        74 ~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~-----~~v~it~G~~~al~l~~~~l~~---------  139 (430)
T PLN00145         74 AEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELST-----DDIYLTAGCAQAIEIIMSVLAQ---------  139 (430)
T ss_pred             HHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCCh-----hhEEEeCCHHHHHHHHHHHhcC---------
Confidence            444445544332 2356666778899999888888776663221     2569999999998887776532         


Q ss_pred             ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842          185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN  264 (499)
Q Consensus       185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~  264 (499)
                        ++..|+++.+++..+...+...|+   +++.+++.++.+|.+|+++|++.++++++      ++++++++||||.+-+
T Consensus       140 --~Gd~Vlv~~P~y~~y~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~~------~i~i~~P~NPtG~v~~  208 (430)
T PLN00145        140 --PGANILLPRPGYPLYEARAVFSGL---EVRHFDLLPERGWEVDLEGVEALADENTV------AMVIINPNNPCGSVYS  208 (430)
T ss_pred             --CCCEEEEcCCCCccHHHHHHHcCC---EEEEeeCCcccCCcCCHHHHHHHhCcCce------EEEEeCCCCCCCCCCC
Confidence              566899999999999999999999   99999876555689999999998876543      7899999999999977


Q ss_pred             ---hhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh--
Q 010842          265 ---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA--  336 (499)
Q Consensus       265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~--  336 (499)
                         +++|+++|+++|+++++|++|+.+.+....+...  +.... --.+..+..|.+..| .-+|+++..++..+...  
T Consensus       209 ~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~-~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~  287 (430)
T PLN00145        209 YEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVA-PVLTLGSISKRWVVPGWRLGWIATCDPNGILKETK  287 (430)
T ss_pred             HHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccC-cEEEEeccccccCCCCeeEEEEEEecchhhhhhhH
Confidence               8889999999999999999998754321111111  11111 124456688986555 66899987543221110  


Q ss_pred             -hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          337 -LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG---VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       337 -~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                       ......+...                  +-....+...++...+.   .+.+++..+...+.++.+.+.|++++++...
T Consensus       288 ~~~~~~~~~~~------------------~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~  349 (430)
T PLN00145        288 VVDSIRNYLNI------------------STDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITCP  349 (430)
T ss_pred             HHHHHHHHhcc------------------cCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence             0000001000                  00001233333333332   3557788888888999999999998888754


Q ss_pred             cCCCceE-EEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          413 VPRHFAL-VCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       413 ~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      ..|.... +.++++... ...  .. ...+++.++. +.|.+++.+..++...++|++++   .+.++++..++.|.+++
T Consensus       350 ~~P~ga~y~~v~l~~~~-~~~--~~-~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~---~~~~~l~~al~rl~~~~  422 (430)
T PLN00145        350 HKPEGSMFVMVKLDLSC-LSG--IK-DDMDFCCKLAKEESVVVLPGSALGMKNWLRITFA---IDPPSLEDGLERLKSFC  422 (430)
T ss_pred             cCCCeeeEEEeccChhh-cCC--CC-CHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC---CCHHHHHHHHHHHHHHH
Confidence            4454443 444443210 000  00 1234555554 44655555555655689999996   46888999999999988


Q ss_pred             HHHhcc
Q 010842          491 DRLFKG  496 (499)
Q Consensus       491 ~~l~~~  496 (499)
                      .+..+.
T Consensus       423 ~~~~~~  428 (430)
T PLN00145        423 LRHAKL  428 (430)
T ss_pred             HHhccc
Confidence            776554

>PRK07324 transaminase; Validated

Probab=99.88  E-value=4.7e-20  Score=186.22  Aligned_cols=317  Identities=12%  Similarity=0.067  Sum_probs=205.1

Q ss_pred             HHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCe
Q 010842          110 LCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKL  189 (499)
Q Consensus       110 l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~  189 (499)
                      +...++.....|....+...+++++.+|+.   +.+++       ..++|+|+++|+..++.+..+           ++.
T Consensus        47 ~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~---~~~~~-------~vi~t~G~~~al~~~~~~l~~-----------~gd  105 (373)
T PRK07324         47 FYQELGQKKLTYGWIEGSPEFKEAVASLYQ---NVKPE-------NILQTNGATGANFLVLYALVE-----------PGD  105 (373)
T ss_pred             HHHHHhcCCccCCCCCCCHHHHHHHHHHhc---CCChh-------hEEEcCChHHHHHHHHHHhCC-----------CCC
Confidence            333344444556665667778887555442   34433       358999999999888876532           566


Q ss_pred             EEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hh
Q 010842          190 VVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VE  266 (499)
Q Consensus       190 ~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~  266 (499)
                      .|+++.++|.++...++..|.   +++.+|++.+++|.+|+++|++.+.++++      +|+++.++|+||.+-+   ++
T Consensus       106 ~Vl~~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~l~~~~~~~~k------li~i~~p~NPtG~~~~~~~l~  176 (373)
T PRK07324        106 HVISVYPTYQQLYDIPESLGA---EVDYWQLKEENGWLPDLDELRRLVRPNTK------LICINNANNPTGALMDRAYLE  176 (373)
T ss_pred             EEEEcCCCchhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHhCCCCCc------EEEEeCCCCCCCCCCCHHHHH
Confidence            788899999999999999999   99999998755688999999988765433      7889999999999977   89


Q ss_pred             HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCC
Q 010842          267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLK  345 (499)
Q Consensus       267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~  345 (499)
                      +|+++|++||+++++|++|...... +.........+ -...+.+..|.++.| ..+|+++. ++..+ +.+.....+..
T Consensus       177 ~i~~~a~~~~~~ii~De~y~~l~~~-~~~~s~~~~~~-~~I~~~s~SK~~~~~G~RiG~i~~-~~~li-~~~~~~~~~~~  252 (373)
T PRK07324        177 EIVEIARSVDAYVLSDEVYRPLDED-GSTPSIADLYE-KGISTNSMSKTYSLPGIRVGWIAA-NEEVI-DILRKYRDYTM  252 (373)
T ss_pred             HHHHHHHHCCCEEEEEccccccccC-CCCCChhhccC-CEEEEecchhhcCCccceeEEEec-CHHHH-HHHHHHhCcEE
Confidence            9999999999999999999765331 11111111111 124556789998755 45788877 33333 22222111110


Q ss_pred             CCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEE
Q 010842          346 NKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFR  423 (499)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~  423 (499)
                      .                    ....+..+++...+.  ..-+++..+...++++.+.+.|++.+++..+.+.....+.++
T Consensus       253 ~--------------------~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~gg~~~~i~  312 (373)
T PRK07324        253 I--------------------CAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFVK  312 (373)
T ss_pred             e--------------------cCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEECCCceEEEEEE
Confidence            0                    012233444444432  223444555556677788888888878776644332233334


Q ss_pred             ecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          424 LNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      +....         ...++.+++. +.|..+..+..+....++|++++   .+++.+++.+++|.++.++
T Consensus       313 ~~~~~---------~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~---~~~~~l~~~l~rl~~~l~~  370 (373)
T PRK07324        313 LDVDM---------PSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYC---CDTETLKKGLKKLSEFLRE  370 (373)
T ss_pred             eCCCC---------CHHHHHHHHHHhcCEEEECccccCCCCeEEEEec---CCHHHHHHHHHHHHHHHHh
Confidence            43210         1345666665 45755555555555578999996   3588899999999887764

>PTZ00433 tyrosine aminotransferase; Provisional

Probab=99.88  E-value=1.2e-19  Score=185.89  Aligned_cols=336  Identities=15%  Similarity=0.108  Sum_probs=219.3

Q ss_pred             hHHHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcC--------CCCccccCCCccEEEcCChHHHHHHHHHH
Q 010842          102 TAGFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLK--------LPKTFMFSGTGGGVIQNTTSDSILVTLIA  172 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g--------~~~~~~~~~~~~g~~t~ggt~A~~~al~~  172 (499)
                      ++..+.+.+...++.. ...|....+..++.+++.+|+.+.++        .+.+       ..++|+|+++|+..++.+
T Consensus        51 p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~-------~i~it~G~~~al~~~~~~  123 (412)
T PTZ00433         51 TPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKD-------NVVLCSGVSHAILMALTA  123 (412)
T ss_pred             CCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChh-------hEEEeCChHHHHHHHHHH
Confidence            4566677776666542 34565555788999999999887654        2222       468999999998888776


Q ss_pred             HHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEE
Q 010842          173 ARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCA  252 (499)
Q Consensus       173 ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~  252 (499)
                      ..+           ++..|+++.++|..+...++.+|+   +++.+|++++.+|.+|+++|++.+.+.+      .+|+.
T Consensus       124 ~~~-----------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~~------~~i~~  183 (412)
T PTZ00433        124 LCD-----------EGDNILVPAPGFPHYETVCKAYGI---EMRFYNCRPEKDWEADLDEIRRLVDDRT------KALIM  183 (412)
T ss_pred             hcC-----------CCCEEEEccCCcccHHHHHHHcCC---EEEEEecCccccCcCCHHHHHHHhccCc------eEEEE
Confidence            532           566788999999999999999999   9999999765568999999998876543      36788


Q ss_pred             ecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCC-CCc-eeEecccccccCC-CcceEEE
Q 010842          253 TVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE-RVD-SFSFSPHKWLLSY-LDCCCLW  326 (499)
Q Consensus       253 t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-~aD-si~~~~hK~l~~p-~~~g~l~  326 (499)
                      +.++||||.+   +++++|+++|+++|+++++|.+|..+......+... ..+. ... .++.+..|.++.| .-+|+++
T Consensus       184 ~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i  262 (412)
T PTZ00433        184 TNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSV-ADFDTTVPRVILGGTAKNLVVPGWRLGWLL  262 (412)
T ss_pred             eCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccch-hhccCCCceEEEccchhhcCCCCeeEEEEE
Confidence            8999999987   457888999999999999999998654321111111 1111 112 4566789998544 6789988


Q ss_pred             EeCc----hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc---HHHHHHHHHHHHHHHHHH
Q 010842          327 VKQP----GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG---VLNLQSHIRSDIRLAKMF  399 (499)
Q Consensus       327 ~r~~----~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~~a~~l  399 (499)
                      ..++    ..+.+.+.........                     ...+...+....+.   ...+++..++..+..+.+
T Consensus       263 ~~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l  321 (412)
T PTZ00433        263 LVDPHGNGGDFLDGMKRLGMLVCG---------------------PCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVL  321 (412)
T ss_pred             EeCCcccHHHHHHHHHHHhhccCC---------------------CChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence            7432    1122222111000000                     01233333333331   345666777777888889


Q ss_pred             HHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeECCEEEEEEeccCCCCcHHH
Q 010842          400 EGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVGGLYMLRFAVGASLTDERH  478 (499)
Q Consensus       400 ~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~~lRi~~~~~~~t~~d  478 (499)
                      .+.|++..++.+..+.....+.+++.... ...  . ....++.+++.+ .|+.+..+..+....++|++++   ..+++
T Consensus       322 ~~~L~~~~~~~~~~p~gg~f~~~~l~~~~-~~~--~-~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~---~~~e~  394 (412)
T PTZ00433        322 YNHIGECIGLSPTMPRGSMFLMSRLDLEK-FRD--I-KSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTIS---RPVEV  394 (412)
T ss_pred             HHHHhcCCCCcccCCCeeEEEEEEechhh-cCC--C-CCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEec---CCHHH
Confidence            99998876776543333444555554210 000  0 013467777764 6765554444544578999996   34788


Q ss_pred             HHHHHHHHHHHHHHH
Q 010842          479 VVAAWELIMEGADRL  493 (499)
Q Consensus       479 i~~l~~~l~~~~~~l  493 (499)
                      +++.++.|.++.++.
T Consensus       395 l~~al~~l~~~~~~~  409 (412)
T PTZ00433        395 LREAVERIKAFCERH  409 (412)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999887654

>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional

Probab=99.88  E-value=9.4e-20  Score=186.08  Aligned_cols=304  Identities=13%  Similarity=0.068  Sum_probs=200.6

Q ss_pred             hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842          125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka  204 (499)
                      .+...+..++.+++++++|.+..         +++++|++++..++.+..+           ++..|++++.+|+++...
T Consensus        83 ~G~~~l~~~l~~~la~~~g~~~~---------i~~tsG~~a~~~~~~~l~~-----------~gd~vi~~~~~~~~~~~~  142 (397)
T PRK06939         83 CGTQDLHKELEEKLAKFLGTEDA---------ILYSSCFDANGGLFETLLG-----------KEDAIISDALNHASIIDG  142 (397)
T ss_pred             cCCcHHHHHHHHHHHHHhCCCcE---------EEEcChHHHHHHHHHHhCC-----------CCCEEEEEhhhhHHHHHH
Confidence            34567888889999999997643         5555568888777654421           567899999999999999


Q ss_pred             HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecc
Q 010842          205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAA  284 (499)
Q Consensus       205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A  284 (499)
                      ++..|.   +++.++.       +|+++|++.+++....+.++.+|+.....+++|.++++++|.++|++||+|+++|++
T Consensus       143 ~~~~~~---~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~  212 (397)
T PRK06939        143 VRLCKA---KRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDS  212 (397)
T ss_pred             HHhcCC---ceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECc
Confidence            999998   7777653       488999999876433333456677666778899999999999999999999999999


Q ss_pred             ccchhccC-ccchhhhcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcc
Q 010842          285 YAGSACIC-PEFRHYLNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQ  361 (499)
Q Consensus       285 ~g~~~~~~-~~~~~~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~  361 (499)
                      |+.+.... ........++ ...|.++.++||+++.+ ..|+++.+.+ .. +.+.. ...+...               
T Consensus       213 ~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~-r~G~v~~~~~-~~-~~l~~~~~~~~~~---------------  274 (397)
T PRK06939        213 HAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGA-SGGYTAGRKE-VI-DWLRQRSRPYLFS---------------  274 (397)
T ss_pred             ccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCcc-CceEEEeCHH-HH-HHHHHhCcccccc---------------
Confidence            96332211 1101111222 24789999999999655 4688776543 22 33321 1111111               


Q ss_pred             cCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHH
Q 010842          362 VGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNR  440 (499)
Q Consensus       362 ~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~  440 (499)
                        ++... .+..+..+++.+.  ..+++.++..++++++.+.|++. ++++. ++...++.+.+.+         .....
T Consensus       275 --~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~---------~~~~~  339 (397)
T PRK06939        275 --NSLAPAIVAASIKVLELLE--ESDELRDRLWENARYFREGMTAA-GFTLG-PGEHPIIPVMLGD---------AKLAQ  339 (397)
T ss_pred             --CCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEECC---------HHHHH
Confidence              11000 1122233344331  22466777888999999999886 66654 3444444444322         12246


Q ss_pred             HHHHHHHhcCCEEEEeeeE----CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          441 KLLDWVNSTGRVYLTHTIV----GGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       441 ~l~~~l~~~g~~~~~~~~~----~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ++.++|.++|+.+. +..+    .+..++|+++. ...+++||+++++.|+++.+++
T Consensus       340 ~~~~~L~~~gI~v~-~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~l~~L~~~~~~~  394 (397)
T PRK06939        340 EFADRLLEEGVYVI-GFSFPVVPKGQARIRTQMS-AAHTKEQLDRAIDAFEKVGKEL  394 (397)
T ss_pred             HHHHHHHHCCceEe-eeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHHh
Confidence            78888888886554 3322    23468999984 6688999999999999987764

>PRK13580 serine hydroxymethyltransferase; Provisional

Probab=99.88  E-value=4e-20  Score=186.77  Aligned_cols=326  Identities=14%  Similarity=0.082  Sum_probs=210.8

Q ss_pred             cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHH-----Hh------------Hhhh
Q 010842          121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRA-----LD------------AVGA  183 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~-----~~------------~~~~  183 (499)
                      |.......++|..+.+...++||.+...        +=.-||+.||+.+..+.....     +.            +.+.
T Consensus        87 y~g~~~~d~ie~l~~~ra~~lf~a~~an--------vqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~  158 (493)
T PRK13580         87 YAGCQNVDTVEWEAAEHAKELFGAEHAY--------VQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWE  158 (493)
T ss_pred             cCCCchHHHHHHHHHHHHHHHhCCCccc--------ccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhh
Confidence            4455677899999999999999987653        666788999998888776420     00            0000


Q ss_pred             ---hccCCeEEEc---CCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC
Q 010842          184 ---ENMHKLVVYG---SDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT  257 (499)
Q Consensus       184 ---~g~~~~~i~~---s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt  257 (499)
                         ..+.+..|+.   +...|.+........|... .++..+++++ ++.+|++++++.+.+.+     | .|++++.++
T Consensus       159 ~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~-~~~~y~vd~~-~g~iD~d~l~~~~~~~~-----p-lvii~g~S~  230 (493)
T PRK13580        159 ALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMF-HQRSYGVDPD-TGLLDYDEIAALAREFK-----P-LILVAGYSA  230 (493)
T ss_pred             hhhccCCCCEEEeecCCCCCeeecCcccchhhhee-eeEecccCcc-cCccCHHHHHHHHhhcC-----C-EEEEeCccc
Confidence               0111233432   3334555433333444211 5566677643 35899999999998754     3 466667676


Q ss_pred             cccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhh
Q 010842          258 STTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL  337 (499)
Q Consensus       258 ~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~  337 (499)
                      . |.+.|+++|+++|+++|++++||+||+.+.+..............+|++++++||++++|.| |++++++.  +.+.+
T Consensus       231 ~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I~~~~~--l~~~L  306 (493)
T PRK13580        231 Y-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLVLAKKE--YADAV  306 (493)
T ss_pred             c-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhccCCCe-EEEEecHH--HHHHH
Confidence            6 55779999999999999999999999987665332221112234699999999999988874 77777654  22333


Q ss_pred             cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CCC
Q 010842          338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PRH  416 (499)
Q Consensus       338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~  416 (499)
                      ....+|+.+...                 .........++..+....++++.++..+++++|++.|.+. |+.++. ...
T Consensus       307 ~~a~P~i~gg~l-----------------~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~ggTd  368 (493)
T PRK13580        307 DKGCPLVLGGPL-----------------PHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR-GARLVTGGTD  368 (493)
T ss_pred             hhCCCcccCCCc-----------------cHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-CCCccCCCCC
Confidence            222345443210                 0011122223333333445778899999999999999987 888764 356


Q ss_pred             ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEE---EeeeECC---EEEEEEeccCC----CCcHHHHHHHHHHH
Q 010842          417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYL---THTIVGG---LYMLRFAVGAS----LTDERHVVAAWELI  486 (499)
Q Consensus       417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~~~g---~~~lRi~~~~~----~~t~~di~~l~~~l  486 (499)
                      .+++.+.+.+.        +.....+.+.|.+.|+.+-   .|+...+   ...||+++. .    ..+++||+++++.|
T Consensus       369 shIV~V~lg~~--------~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~-A~ttrg~teedi~~iad~l  439 (493)
T PRK13580        369 NHLVLIDVTSF--------GLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTP-ALTTLGMGSDEMDEVAELI  439 (493)
T ss_pred             CCEEEEEeCCH--------HHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccc-hhhhcCCCHHHHHHHHHHH
Confidence            68888877542        1123356667888886432   1333344   567999984 5    33699999999999


Q ss_pred             HHHHHHH
Q 010842          487 MEGADRL  493 (499)
Q Consensus       487 ~~~~~~l  493 (499)
                      .++.+..
T Consensus       440 ~~~l~~~  446 (493)
T PRK13580        440 VKVLSNT  446 (493)
T ss_pred             HHHHHhh
Confidence            8887643

>PLN00175 aminotransferase family protein; Provisional

Probab=99.87  E-value=4.3e-20  Score=188.81  Aligned_cols=329  Identities=13%  Similarity=0.111  Sum_probs=221.0

Q ss_pred             HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      +..+.+.+...+......|....+..++++++.+|+.+..|.+-+.    ....++|+|+++|+..++.+..+       
T Consensus        69 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~----~~~I~vt~G~~~al~~~~~~l~~-------  137 (413)
T PLN00175         69 PDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDP----EKEVTVTSGCTEAIAATILGLIN-------  137 (413)
T ss_pred             CHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCHHHHHHHHHHHhCC-------
Confidence            3455666666665444567777788999999999999988864211    01358899999998777665432       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|+++++.|..+...++..|.   +++.||+++++ |.+|+++|++.+.+.++      +|+++.++||||.+
T Consensus       138 ----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~-~~~~~~~l~~~~~~~~k------~i~i~~p~NPtG~~  203 (413)
T PLN00175        138 ----PGDEVILFAPFYDSYEATLSMAGA---KIKTVTLRPPD-FAVPEDELKAAFTSKTR------AILINTPHNPTGKM  203 (413)
T ss_pred             ----CCCEEEEeCCCchhHHHHHHHcCC---EEEEEECCccc-CCCCHHHHHHhcCcCce------EEEecCCCCCCCcC
Confidence                567888899999999999999999   99999997653 79999999999865443      67888999999999


Q ss_pred             C---ChhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842          263 D---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA  336 (499)
Q Consensus       263 d---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~  336 (499)
                      -   ++++|+++|++|++|+++|.+|..+.+. +.....  +.+...-..++.+..|.++.| .-+|+++.... .. +.
T Consensus       204 ~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~-~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~-l~-~~  280 (413)
T PLN00175        204 FTREELELIASLCKENDVLAFTDEVYDKLAFE-GDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH-LT-WG  280 (413)
T ss_pred             CCHHHHHHHHHHHHHcCcEEEEecccCccccC-CcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHH-HH-HH
Confidence            5   5788999999999999999999776432 111111  112112335667889999855 56788876542 22 22


Q ss_pred             hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842          337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP  414 (499)
Q Consensus       337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~  414 (499)
                      +.....+...                    ....+..+++...+  +...+++..++..+.++.+.+.|++. ++++. +
T Consensus       281 l~~~~~~~~~--------------------~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~  338 (413)
T PLN00175        281 VRQAHSFLTF--------------------ATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV-GFKVY-P  338 (413)
T ss_pred             HHHHHhhccC--------------------CCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-C
Confidence            2111111100                    11223344444444  34556777888888899999999887 67765 4


Q ss_pred             CCceE-EEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC-----CEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          415 RHFAL-VCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG-----GLYMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       415 ~~~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~-----g~~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                      |..+. +.+++.+.+      . ....++.+.|. +.|+.+..+..+.     +..++|++++   .+++++++.++.|.
T Consensus       339 p~g~~f~~~~~~~~~------~-~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~---~~~e~l~~~~~rL~  408 (413)
T PLN00175        339 SSGTYFVMVDHTPFG------F-ENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFC---KDEETLRAAVERMK  408 (413)
T ss_pred             CCeeEEEEEeccccC------C-CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEc---CCHHHHHHHHHHHH
Confidence            54443 444443211      0 01356677765 4576655554442     3468999996   36899999999998


Q ss_pred             HHHH
Q 010842          488 EGAD  491 (499)
Q Consensus       488 ~~~~  491 (499)
                      ++.+
T Consensus       409 ~~~~  412 (413)
T PLN00175        409 TKLK  412 (413)
T ss_pred             HHHh
Confidence            8754

>PLN02187 rooty/superroot1

Probab=99.87  E-value=2.1e-19  Score=185.72  Aligned_cols=342  Identities=11%  Similarity=0.037  Sum_probs=220.3

Q ss_pred             HHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          104 GFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       104 ~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      ..+.+.+...+... ...|...++...+.+++.+|+.+.+|++-+.     ...++|+|+++|+..++.+..+       
T Consensus        86 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~-----~~I~it~G~~~al~~~~~~l~~-------  153 (462)
T PLN02187         86 IEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTP-----EDIFLTAGCNQGIEIVFESLAR-------  153 (462)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCc-----ccEEEeCCHHHHHHHHHHHhcC-------
Confidence            34444454444322 2456666778889999999998877653221     2468999999998887776532       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|+++.++++.+...++..|+   +++.++..++++|.+|+++|++++++.+      .+++.+.++||||.+
T Consensus       154 ----pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~~~l~~~~~~~~d~~~l~~~~~~~~------~~v~i~nP~NPTG~v  220 (462)
T PLN02187        154 ----PNANILLPRPGFPHYDARAAYSGL---EVRKFDLLPEKEWEIDLEGIEAIADENT------VAMVVINPNNPCGNV  220 (462)
T ss_pred             ----CCCEEEEeCCCCccHHHHHHHcCC---EEEEEeCccccCCccCHHHHHHhcCCCc------EEEEEeCCCCCCCCc
Confidence                567889999999999999999999   9999998654568999999998876543      378889999999999


Q ss_pred             CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCC-CCc-eeEecccccccCC-CcceEEEEeCchhHH--
Q 010842          263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE-RVD-SFSFSPHKWLLSY-LDCCCLWVKQPGLLV--  334 (499)
Q Consensus       263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-~aD-si~~~~hK~l~~p-~~~g~l~~r~~~~l~--  334 (499)
                      -+   +++|+++|++||+|+++|++|+.+.+..+.+... ..+. ... .+..+..|.++.| .-+|+++..++....  
T Consensus       221 ~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~-~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~  299 (462)
T PLN02187        221 YSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSM-GKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFET  299 (462)
T ss_pred             cCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeH-HHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHH
Confidence            55   8889999999999999999998764422111111 1111 112 3446789996666 668998875543111  


Q ss_pred             -HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010842          335 -KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPRFE  410 (499)
Q Consensus       335 -~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~  410 (499)
                       +.+.....+..-                  +-....+..+++...+   ..+.+++..+...+.++++.+.|++++++.
T Consensus       300 ~~~~~~~~~~~~~------------------~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~  361 (462)
T PLN02187        300 TKVLQSIKQNLDV------------------TPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVV  361 (462)
T ss_pred             HHHHHHHHHhccc------------------cCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCc
Confidence             111111111000                  0000123334444443   245677778888888999999999886543


Q ss_pred             EEcCCCc-eEEEEEecCCCCCCcchhHHHHHHHHHH-HHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          411 IVVPRHF-ALVCFRLNPYPHSGSADTEMLNRKLLDW-VNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       411 ~~~~~~~-~~v~f~~~~~~~~~~~~~~~~~~~l~~~-l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      .+..|.. +.+.+++.... ...  .. ...+++.+ +.++|+++..+..+....++|++++   +.++.++..+++|.+
T Consensus       362 ~~~~P~gg~fl~~~l~~~~-~~~--~~-~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~---~~~e~l~~al~rL~~  434 (462)
T PLN02187        362 CPKKPESCTYLLTKLELSL-MDN--IK-DDIDFCVKLAREENLVFLPGDALGLKNWMRITIG---VEAHMLEDALERLKG  434 (462)
T ss_pred             CCCCCCEeEEEEeecChhh-CCC--CC-CHHHHHHHHHhhCCEEEECccccCCCCeEEEEeC---CCHHHHHHHHHHHHH
Confidence            3334544 33434443110 000  00 02234333 4566766555555555689999997   468889999999999


Q ss_pred             HHHHHhcc
Q 010842          489 GADRLFKG  496 (499)
Q Consensus       489 ~~~~l~~~  496 (499)
                      ++++..+.
T Consensus       435 ~l~~~~~~  442 (462)
T PLN02187        435 FCTRHAKK  442 (462)
T ss_pred             HHHHhhhc
Confidence            98776543

>PLN02656 tyrosine transaminase

Probab=99.87  E-value=2.1e-19  Score=183.78  Aligned_cols=339  Identities=13%  Similarity=0.052  Sum_probs=220.9

Q ss_pred             HHHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          103 AGFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      |..+.+.+...+..+ ...|....+...+++++.+++.+..|.+-+.     ...++|+|+++|+..++.+..+      
T Consensus        50 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~------  118 (409)
T PLN02656         50 THVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSL-----DDVFITSGCTQAIDVALSMLAR------  118 (409)
T ss_pred             CHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCc-----ccEEEeCChHHHHHHHHHHHhC------
Confidence            455666666655543 3457667788899999999998887763221     2468999999998877776532      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                           ++..|+++.++|..+...+...|+   +++.+|++++.+|.+|+++|++++++++      .+|+.+.++|+||.
T Consensus       119 -----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~P~NPtG~  184 (409)
T PLN02656        119 -----PGANILLPRPGFPIYELCAAFRHL---EVRYVDLLPEKGWEVDLDAVEALADQNT------VALVIINPGNPCGN  184 (409)
T ss_pred             -----CCCeEEEeCCCCCcHHHHHHHcCC---EEEEEeCCCcCCCCCCHHHHHHHhccCc------eEEEEECCCCCCCC
Confidence                 566788899999988888899999   9999998654458899999998876543      36888889999999


Q ss_pred             c---CChhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCc-----
Q 010842          262 V---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQP-----  330 (499)
Q Consensus       262 i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~-----  330 (499)
                      +   +++++|+++|+++|+|+++|++|+.+.+........  +.... --.+..+..|.++.| .-+|+++..++     
T Consensus       185 ~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~-~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~  263 (409)
T PLN02656        185 VYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIV-PVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFR  263 (409)
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccC-cEEEEcccchhccCcceeEEEEEEeCcccccc
Confidence            9   678999999999999999999998764321111111  11111 123456789985555 67899988532     


Q ss_pred             -hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcC
Q 010842          331 -GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG---VLNLQSHIRSDIRLAKMFEGFVKSD  406 (499)
Q Consensus       331 -~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~  406 (499)
                       ..+.+.+.........                     ...+...++...+.   ...+++..++..+.++.+.+.|+.+
T Consensus       264 ~~~~~~~~~~~~~~~~~---------------------~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~  322 (409)
T PLN02656        264 DPKIVERIKKYFDILGG---------------------PATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEI  322 (409)
T ss_pred             cHHHHHHHHHHHhhhcC---------------------CCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence             1122222111000000                     11233444444442   3457777778888888999999887


Q ss_pred             CCeEEEcCCCceE-EEEEecCCCCCCcchhHHHHHH-HHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHH
Q 010842          407 PRFEIVVPRHFAL-VCFRLNPYPHSGSADTEMLNRK-LLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWE  484 (499)
Q Consensus       407 ~~~~~~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~-l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~  484 (499)
                      +++..+.+|..+. +++++.... ...  .. ...+ +.+.+.+.|+.+..+..+....++|++++   .+++++++.++
T Consensus       323 ~~~~~~~~p~gg~~~w~~l~~~~-~~~--~~-~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~---~~~e~l~eal~  395 (409)
T PLN02656        323 PCITCPHKPEGSMAVMVKLNLSL-LED--IS-DDIDFCFKLAREESVIILPGTAVGLKNWLRITFA---ADPSSLEEALG  395 (409)
T ss_pred             CCCcCCcCCCeEEEEEEecchhh-cCC--CC-CHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeC---CCHHHHHHHHH
Confidence            6654333455444 334442100 000  00 0122 33455567766655555555678999997   36889999999


Q ss_pred             HHHHHHHHHhc
Q 010842          485 LIMEGADRLFK  495 (499)
Q Consensus       485 ~l~~~~~~l~~  495 (499)
                      .|+++..+...
T Consensus       396 rl~~~~~~~~~  406 (409)
T PLN02656        396 RIKSFYLRHSK  406 (409)
T ss_pred             HHHHHHHHhcc
Confidence            99998776543

>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family

Probab=99.87  E-value=4.2e-21  Score=192.40  Aligned_cols=338  Identities=13%  Similarity=0.040  Sum_probs=215.5

Q ss_pred             ccCCCCCChHHHHHHHHHHHc----ccCCcccccC---hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCC-hHHH
Q 010842           94 AFFPATVSTAGFLGEMLCACF----NSVGFNWLAS---PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNT-TSDS  165 (499)
Q Consensus        94 ~~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~~---p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~g-gt~A  165 (499)
                      .|.|++...|..+.+.+...+    |.+...+..+   +.+.++-.++++.+++++|.+...      ..+||+| ||+|
T Consensus         2 ~~~pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~------~vvf~~gs~T~a   75 (355)
T cd00611           2 NFSAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNY------KVLFLQGGATGQ   75 (355)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHH
Confidence            366788788877777777666    4444445555   566678888999999999985432      3578877 9988


Q ss_pred             HHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccC-HHHHHHHHHHHHHcC
Q 010842          166 ILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLS-PQLLRRAVEADVEAG  244 (499)
Q Consensus       166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d-~~~L~~~i~~~~~~g  244 (499)
                      +-+++......        +.+..+|++....|.+ .+.++..|+   +++.+++++++.+ .+ ++..+..+.+++   
T Consensus        76 ~~~~~~~l~~~--------~~~~~~i~~g~~~~~~-~~~a~~~g~---~~~~~~~~~~g~~-~~~~~~~~~~~~~~~---  139 (355)
T cd00611          76 FAAVPLNLLGD--------KGTADYVVTGAWSAKA-AKEAKRYGG---VVVIVAAKEEGKY-TKIPDVETWDLAPDA---  139 (355)
T ss_pred             HHHHHHhcCCC--------CCeEEEEECCHHHHHH-HHHHHhcCC---CcEEEecccccCC-CCCCCHhhcCCCCCC---
Confidence            76666554210        1145566665444444 345677798   9999998654322 13 222223343333   


Q ss_pred             CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceE
Q 010842          245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCC  324 (499)
Q Consensus       245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~  324 (499)
                         .+|++++.+|.||.+  +.   ++++.||+.++||++++.+....+-        +..|....++||+++ |.|.|+
T Consensus       140 ---~lV~~~h~~t~tG~~--~~---~i~~~~g~~~~VDa~qs~g~~~idv--------~~~~~~~ss~~K~lG-P~G~g~  202 (355)
T cd00611         140 ---AYVHYCSNETIHGVE--FD---EVPDTGGVPLVADMSSNILSRPIDV--------SKFGVIYAGAQKNLG-PAGVTV  202 (355)
T ss_pred             ---CEEEEeCCcccccEE--cc---eecccCCCeEEEEccccccCCCCCH--------HHhCEEEeecccccC-CCceEE
Confidence               379999999999997  22   4555699999999999877655432        123445556999875 899999


Q ss_pred             EEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHH
Q 010842          325 LWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGF  402 (499)
Q Consensus       325 l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~  402 (499)
                      ++++++.. .+.-...+.+.....     ......  ..++... ....+..+++.+-.+ |++++.++..++++++++.
T Consensus       203 l~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~--~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~  274 (355)
T cd00611         203 VIVRKDLL-GKARKITPSMLNYKT-----HADNNS--LYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDT  274 (355)
T ss_pred             EEECHHHH-hhcccCCCCcccHHH-----HHhcCC--CCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence            99987543 111111111110000     000000  0111111 235777888888777 7999999999999999999


Q ss_pred             HhcCCCeE-EEcC--CCc-eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHH
Q 010842          403 VKSDPRFE-IVVP--RHF-ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERH  478 (499)
Q Consensus       403 L~~~~~~~-~~~~--~~~-~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~d  478 (499)
                      |+++||+. ...+  ... .+++|.+...         .+..++.+.+.++|.+ ... ..+..+.+|+|+. +++|++|
T Consensus       275 l~~~~gl~~~~~~~~~rs~~vvsf~~~~~---------~l~~~~~~~~~r~G~~-~~~-~~~~~g~vR~S~~-~~nt~ed  342 (355)
T cd00611         275 IDNSNGFYRGPVDKRARSRMNVPFRLGKE---------ELEKEFLKEAEAAGMI-GLK-GHRSVGGIRASIY-NALSLEG  342 (355)
T ss_pred             HHhCccccccCCCHHHcCceEEEEEcCCh---------hhhHHHHHHHHHCCCc-ccC-CCcccCeEEEEcc-CCCCHHH
Confidence            99998863 2211  133 4588886541         2234555667778864 222 2122357999995 8899999


Q ss_pred             HHHHHHHHHHHH
Q 010842          479 VVAAWELIMEGA  490 (499)
Q Consensus       479 i~~l~~~l~~~~  490 (499)
                      |++++++|+++.
T Consensus       343 i~~l~~al~~~~  354 (355)
T cd00611         343 VQALADFMKEFQ  354 (355)
T ss_pred             HHHHHHHHHHHh
Confidence            999999999853

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.

>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT)

Probab=99.87  E-value=2.7e-20  Score=190.41  Aligned_cols=339  Identities=15%  Similarity=0.099  Sum_probs=208.5

Q ss_pred             ccccCCCCCChHHHHHHHHHHHc-cc------CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHH
Q 010842           92 FFAFFPATVSTAGFLGEMLCACF-NS------VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSD  164 (499)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~~-n~------~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~  164 (499)
                      .+...+++..++..+.+.+...+ ..      ....+...+....+|+.+.+++++++|.+...        ++++|||+
T Consensus        21 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~--------v~~~sgt~   92 (402)
T cd00378          21 TLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYAN--------VQPHSGSQ   92 (402)
T ss_pred             CeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCcee--------eecCCcHH
Confidence            55556665555445555554433 11      12234455677888888889999999987542        55557889


Q ss_pred             HHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH-----HHHhCCCCCCeEEeeCCCC-CCCccCHHHHHHHHH
Q 010842          165 SILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV-----CKLAGVSPANIRALPTSVD-ANFSLSPQLLRRAVE  238 (499)
Q Consensus       165 A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka-----~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~  238 (499)
                      |+..++.+...           ++..|+++...|.+....     ++..|.   .++.++++.+ .++.+|+++|++++.
T Consensus        93 a~~~~l~~l~~-----------~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~id~~~l~~~i~  158 (402)
T cd00378          93 ANLAVYFALLE-----------PGDTIMGLDLSHGGHLTHGSFTKVSASGK---LFESVPYGVDPETGLIDYDALEKMAL  158 (402)
T ss_pred             HHHHHHHHhcC-----------CCCEEEEecCccCccccccccccccccce---eEEEecCCcCcccCCcCHHHHHHHHH
Confidence            98877776532           566788888887654322     556676   7777777543 147999999999986


Q ss_pred             HHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccC
Q 010842          239 ADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLS  318 (499)
Q Consensus       239 ~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~  318 (499)
                      +.     .|.+|+.+.++  +|...|+++|+++|+++|+++++|++|..+..........+   ..+|+++.++|||+.+
T Consensus       159 ~~-----~~~~v~~~~~~--~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~---~~~dv~~~s~sK~l~G  228 (402)
T cd00378         159 EF-----KPKLIVAGASA--YPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPL---PGADVVTTTTHKTLRG  228 (402)
T ss_pred             hC-----CCCEEEecCcc--cCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCcc---cCCcEEEeccccCCCC
Confidence            42     13355555543  46778999999999999999999999754432211111111   1479999999999966


Q ss_pred             CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 010842          319 YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAK  397 (499)
Q Consensus       319 p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~  397 (499)
                      |. +|+++.+++....+.......+...                  +.... ...+..++......+++++.++..++++
T Consensus       229 ~~-gg~i~~~~~~~~~~l~~~~~~~~~~------------------~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~  289 (402)
T cd00378         229 PR-GGLILTRKGELAKKINSAVFPGLQG------------------GPHLHVIAAKAVALKEALEPEFKAYAKQVVENAK  289 (402)
T ss_pred             CC-ceEEEeccHHHHHHHHHHhCccccC------------------CchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence            65 4555555533332211111111111                  00001 1122223333322366778888999999


Q ss_pred             HHHHHHhcCCCeEEEc-CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEE---eeeE---CCEEEEEEecc
Q 010842          398 MFEGFVKSDPRFEIVV-PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLT---HTIV---GGLYMLRFAVG  470 (499)
Q Consensus       398 ~l~~~L~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~~~---~g~~~lRi~~~  470 (499)
                      ++.+.|++. +++++. +...+.+++.+.+..      .  ....+.+.|.+.|+.+..   +...   .+...+|+++.
T Consensus       290 ~l~~~L~~~-g~~~~~~~~~~~~v~v~~~~~~------~--~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~  360 (402)
T cd00378         290 ALAEALKER-GFKVVSGGTDNHLVLVDLRPKG------I--TGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTP  360 (402)
T ss_pred             HHHHHHHhC-CCeEeecCCCCeEEEEeCCccC------C--CHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCH
Confidence            999999987 888764 345566666665321      0  023445556666754421   1111   13357999884


Q ss_pred             CCC----CcHHHHHHHHHHHHHHHH
Q 010842          471 ASL----TDERHVVAAWELIMEGAD  491 (499)
Q Consensus       471 ~~~----~t~~di~~l~~~l~~~~~  491 (499)
                       ..    .+++||+++++.|+++.+
T Consensus       361 -~~~~~~~~~~di~~~~~~l~~~~~  384 (402)
T cd00378         361 -AMTTRGMGEEEMEEIADFIARALK  384 (402)
T ss_pred             -HHHHhCCCHHHHHHHHHHHHHHHh
Confidence             43    479999999999988654

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.

>PLN02483 serine palmitoyltransferase

Probab=99.87  E-value=2.5e-19  Score=186.00  Aligned_cols=342  Identities=14%  Similarity=0.083  Sum_probs=217.0

Q ss_pred             CCCCCccccccCCCCCChHHHHHHHHHHHcccCCc---ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCC
Q 010842           85 THWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGF---NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNT  161 (499)
Q Consensus        85 ~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~---~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~g  161 (499)
                      .++.+-.|+|+-...+..+..+.+.+..+-...+.   .+...+...++|++    +++++|.++.         +++++
T Consensus       103 ~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~----lA~~~g~~~a---------i~~~~  169 (489)
T PLN02483        103 LNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEEL----VARFVGKPAA---------IVFGM  169 (489)
T ss_pred             EEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHH----HHHHhCCCcE---------EEECC
Confidence            45677789998755555555555655553211111   12233444555555    8999997654         67777


Q ss_pred             hHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH
Q 010842          162 TSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV  241 (499)
Q Consensus       162 gt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~  241 (499)
                      |+.+|+.++.+...           ++..|++++..|.++..+++..|+   +++.++.+       |+++|++.+++..
T Consensus       170 G~~an~~~i~al~~-----------~Gd~Vi~d~~~h~s~~~~~~~~Ga---~v~~~~~~-------d~~~le~~l~~~i  228 (489)
T PLN02483        170 GYATNSTIIPALIG-----------KGGLIISDSLNHNSIVNGARGSGA---TIRVFQHN-------TPSHLEEVLREQI  228 (489)
T ss_pred             HHHHHHHHHHHhCC-----------CCCEEEEcchhhHHHHHHHHHcCC---eEEEEeCC-------CHHHHHHHHHhhh
Confidence            88888866655422           567899999999999999999999   99999853       5688888776543


Q ss_pred             HcC-------CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchh--hhcCC--CCCceeEe
Q 010842          242 EAG-------LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH--YLNGI--ERVDSFSF  310 (499)
Q Consensus       242 ~~g-------~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~--~~~g~--~~aDsi~~  310 (499)
                      ..+       ..-.+|+.....+++|.+.++++|+++|++||+++++|+||+.+.. .+..+.  ...++  ..+|.++.
T Consensus       229 ~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~-G~~G~g~~~~~~v~~~~~dI~~~  307 (489)
T PLN02483        229 AEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAV-GKTGRGVCELLGVDPADVDIMMG  307 (489)
T ss_pred             hccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCcc-CCCCCchHHhcCCCcccCcEEEE
Confidence            211       0113455555568899999999999999999999999999974432 111111  01122  35789999


Q ss_pred             cccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-c---HHHH
Q 010842          311 SPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-G---VLNL  385 (499)
Q Consensus       311 ~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g---~~g~  385 (499)
                      +.+|.++.+  .|+++.+ ++.+ +.+.. ...+.....                ..+..+..+..+++.+ +   .+..
T Consensus       308 SfSKs~g~~--GG~i~~~-~~li-~~l~~~~~~~~~~~~----------------~~p~~~~~~~aaL~~l~~~~g~~~~  367 (489)
T PLN02483        308 TFTKSFGSC--GGYIAGS-KELI-QYLKRTCPAHLYATS----------------MSPPAVQQVISAIKVILGEDGTNRG  367 (489)
T ss_pred             ecchhcccC--ceEEEcC-HHHH-HHHHHhCccccccCC----------------cCHHHHHHHHHHHHHHHhCccccch
Confidence            999999754  3666543 3333 22221 111111100                0000111222334332 1   2234


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE----CC
Q 010842          386 QSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV----GG  461 (499)
Q Consensus       386 ~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g  461 (499)
                      .++.++..++++++.+.|+++ ++++..+....++.+.+...         ....++.++|.++|+.+.. ..+    .+
T Consensus       368 ~~~~~~l~~~~~~l~~~L~~~-G~~v~~~~~sp~~~l~l~~~---------~~~~~~~~~Ll~~GI~v~~-~~fp~~p~~  436 (489)
T PLN02483        368 AQKLAQIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNP---------AKIPAFSRECLKQNVAVVV-VGFPATPLL  436 (489)
T ss_pred             HHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCEEEEEECCH---------HHHHHHHHHHHHCCcEEee-eCCCCCCCC
Confidence            556788889999999999988 78776554555655554321         1234677778888876553 222    23


Q ss_pred             EEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          462 LYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       462 ~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ...+|+++. ..+|++||++++++|.++.+.+
T Consensus       437 ~~~vRi~is-a~~t~edId~~l~~L~~~~~~~  467 (489)
T PLN02483        437 LARARICIS-ASHSREDLIKALEVISEVGDLV  467 (489)
T ss_pred             CceEEEEeC-CCCCHHHHHHHHHHHHHHHHHh
Confidence            367999994 7789999999999999988764

>PTZ00377 alanine aminotransferase; Provisional

Probab=99.87  E-value=4.5e-19  Score=184.88  Aligned_cols=332  Identities=17%  Similarity=0.124  Sum_probs=214.5

Q ss_pred             CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC
Q 010842          118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT  197 (499)
Q Consensus       118 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~  197 (499)
                      ...|....+..++.+++.+|+.+..|.+.+.     ...++|+|+++|+..++.+....          ++..|+++.++
T Consensus       108 ~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-----~~I~it~Ga~~al~~~~~~l~~~----------~gD~Vlv~~P~  172 (481)
T PTZ00377        108 TGAYTDSAGYPFVRKAVAAFIERRDGVPKDP-----SDIFLTDGASSGIKLLLQLLIGD----------PSDGVMIPIPQ  172 (481)
T ss_pred             ccCcCcccCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEcCCHHHHHHHHHHHhccC----------CCCEEEECCCC
Confidence            3457777788999999999999887865321     25689999999988887765411          56789999999


Q ss_pred             chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHH
Q 010842          198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANE  274 (499)
Q Consensus       198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~  274 (499)
                      +..+...++..|.   .++.||++++++|.+|+++|++++++..+++.++.+|+++.++||||.+-+   +++|+++|++
T Consensus       173 y~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~  249 (481)
T PTZ00377        173 YPLYSAAITLLGG---KQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYE  249 (481)
T ss_pred             chhHHHHHHHcCC---EEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence            9999999999999   999999987656899999999999865444445667777899999999966   8899999999


Q ss_pred             hCCEEEeeccccchhccC-ccc---hhhhcCCCC-----Ccee-Eecccccc-c-CCCcceEEEEe--CchhHHHhhcC-
Q 010842          275 YGIWVHVDAAYAGSACIC-PEF---RHYLNGIER-----VDSF-SFSPHKWL-L-SYLDCCCLWVK--QPGLLVKALST-  339 (499)
Q Consensus       275 ~~~~lhvD~A~g~~~~~~-~~~---~~~~~g~~~-----aDsi-~~~~hK~l-~-~p~~~g~l~~r--~~~~l~~~~~~-  339 (499)
                      |++|+++|.+|+...+.. ..+   .....++..     ...+ ..+..|.+ + ...-+|++...  +++.. +.+.. 
T Consensus       250 ~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li-~~l~~~  328 (481)
T PTZ00377        250 KGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVR-EQIYKL  328 (481)
T ss_pred             CCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHH-HHHHHH
Confidence            999999999998654311 111   111112111     1133 45789975 4 34668988763  33322 22211 


Q ss_pred             CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-----cHH-------HHHHHHHHHHHHHHHHHHHHhcCC
Q 010842          340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-----GVL-------NLQSHIRSDIRLAKMFEGFVKSDP  407 (499)
Q Consensus       340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----g~~-------g~~~~~~~~~~~a~~l~~~L~~~~  407 (499)
                      ...++.                      ...+...++...+     +..       .+++..++..+.++.+.+.|++++
T Consensus       329 ~~~~~~----------------------~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~  386 (481)
T PTZ00377        329 ASINLC----------------------SNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIE  386 (481)
T ss_pred             hheecC----------------------CChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            111110                      0123333333333     111       122222334667788899999888


Q ss_pred             CeEEEcCCCceEEEE-Eec-CCCCCCc---chhHHHHHHH-HHHHHhcCCEEEEeeeEC---CEEEEEEeccCCCCcHHH
Q 010842          408 RFEIVVPRHFALVCF-RLN-PYPHSGS---ADTEMLNRKL-LDWVNSTGRVYLTHTIVG---GLYMLRFAVGASLTDERH  478 (499)
Q Consensus       408 ~~~~~~~~~~~~v~f-~~~-~~~~~~~---~~~~~~~~~l-~~~l~~~g~~~~~~~~~~---g~~~lRi~~~~~~~t~~d  478 (499)
                      ++++. +|+.+.+.| ++. +......   .... ....+ ...+.+.|+.++.+..+.   +..++|++++   +++++
T Consensus       387 g~~~~-~p~gg~fl~~~~~l~~~~~~~~~~~~~~-~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~---~~~e~  461 (481)
T PTZ00377        387 GVSCQ-PVEGAMYAFPRIELPEKAIQEAKERGLA-PDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITIL---PPEEQ  461 (481)
T ss_pred             CcEee-cCCeeEEEEeeccCchhhHHHHHhcCCC-cHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEEC---CCHHH
Confidence            88876 455444444 332 1110000   0000 01223 344455676666555554   3468999995   67889


Q ss_pred             HHHHHHHHHHHHHHHhc
Q 010842          479 VVAAWELIMEGADRLFK  495 (499)
Q Consensus       479 i~~l~~~l~~~~~~l~~  495 (499)
                      +++.+++|.++.++..+
T Consensus       462 l~~~l~rl~~~~~~~~~  478 (481)
T PTZ00377        462 IEEMVKKIKEFHESFMK  478 (481)
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence            99999999998887654

>PRK13034 serine hydroxymethyltransferase; Reviewed

Probab=99.87  E-value=6.1e-20  Score=187.36  Aligned_cols=308  Identities=12%  Similarity=0.061  Sum_probs=195.1

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-HH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-FA  202 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-~~  202 (499)
                      .|...++|+.+.+.+++++|.+...        ++++|||.||+.++.+...           ++..|+++...|.+ +.
T Consensus        69 ~~~~~~lE~~~~~~la~l~g~~~al--------v~~~SG~~A~~~~l~al~~-----------~GD~Vl~~~~~~~~~~~  129 (416)
T PRK13034         69 CEFVDEVEALAIERAKQLFGCDYAN--------VQPHSGSQANGAVYLALLK-----------PGDTILGMSLSHGGHLT  129 (416)
T ss_pred             ChHHHHHHHHHHHHHHHHhCCCceE--------EecCCcHHHHHHHHHHhcC-----------CCCEEEEcCccceeeee
Confidence            4667888886777899999987642        4578999999988876532           67889999999987 33


Q ss_pred             HHHHHhCCCCCCe--EEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842          203 KVCKLAGVSPANI--RALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH  280 (499)
Q Consensus       203 ka~~~~G~g~~~v--~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh  280 (499)
                      ..++....+. ..  +.++++.. ++.+|+++|++.+...     .|.+|+...  +.+|..-|+++|.++|++||++++
T Consensus       130 ~g~~~~~~~~-~~~~~~~~~~~~-~~~~d~~~le~~l~~~-----~~klVi~~~--~~~g~~~dl~~l~~la~~~g~~li  200 (416)
T PRK13034        130 HGAKVSLSGK-WYNAVQYGVDRL-TGLIDYDEVEELAKEH-----KPKLIIAGF--SAYPRELDFARFREIADEVGALLM  200 (416)
T ss_pred             cCCcceeccc-eeeeEEcccccc-cCCcCHHHHHHHHhhc-----CCeEEEECC--CccccccCHHHHHHHHHHcCCEEE
Confidence            3333211111 22  34555433 3579999999988542     244555433  346888899999999999999999


Q ss_pred             eeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCc
Q 010842          281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDW  360 (499)
Q Consensus       281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~  360 (499)
                      ||+||+.+.+..+...   ..+..+|.+++++|||+.+|.| |+++.+++... .....   +++..             
T Consensus       201 vD~Aha~G~~~~g~~~---~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~-~~~~~---~~~~~-------------  259 (416)
T PRK13034        201 VDMAHIAGLVAAGEHP---NPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIA-KKINS---AVFPG-------------  259 (416)
T ss_pred             EeCcccccCcccCCCC---CCCCCceEEEEeCcccCCCCCC-eEEEECcHHHH-HHHHh---hcCCc-------------
Confidence            9999987765433211   1234599999999999987865 56666554322 11111   11110             


Q ss_pred             ccCCCCCCCc-HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcchhHHH
Q 010842          361 QVGTGRRFKS-LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSADTEML  438 (499)
Q Consensus       361 ~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~  438 (499)
                       ++.+..+.. ..+..++...-..+..++.++..+++++|++.|++. |+++..+ +..+++.+.+....        ..
T Consensus       260 -~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~v~~~~~~--------~~  329 (416)
T PRK13034        260 -LQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLLVDLRPKG--------LS  329 (416)
T ss_pred             -ccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEEEEcCCCC--------CC
Confidence             001111111 112222222211234466789999999999999988 8988743 45677766664422        11


Q ss_pred             HHHHHHHHHhcCCEEEEe---e---eECCEEEEEEeccCC----CCcHHHHHHHHHHHHHHHH
Q 010842          439 NRKLLDWVNSTGRVYLTH---T---IVGGLYMLRFAVGAS----LTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       439 ~~~l~~~l~~~g~~~~~~---~---~~~g~~~lRi~~~~~----~~t~~di~~l~~~l~~~~~  491 (499)
                      ...+.++|.+.|+.+...   .   .......+|+++ +.    ..+++||++++++|.++..
T Consensus       330 ~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~-~~~t~~~~~~~di~~l~~~l~~~~~  391 (416)
T PRK13034        330 GKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGT-PAGTTRGFGEAEFREIANWILDVLD  391 (416)
T ss_pred             HHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCc-HHHHhCCCCHHHHHHHHHHHHHHHh
Confidence            344556777778543220   0   011234699997 35    5679999999999998765

>PRK07682 hypothetical protein; Validated

Probab=99.87  E-value=7.6e-20  Score=185.44  Aligned_cols=328  Identities=13%  Similarity=0.094  Sum_probs=217.7

Q ss_pred             HHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc
Q 010842          106 LGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN  185 (499)
Q Consensus       106 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g  185 (499)
                      +.+.+...+......|...++...+.+++.+|+.+.+|.+-+.    ....++|+|+++|+..++.+..+          
T Consensus        38 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~i~~t~G~~~al~~~~~~l~~----------  103 (378)
T PRK07682         38 VREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDP----NDEIIVTVGASQALDVAMRAIIN----------  103 (378)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhCC----------
Confidence            3344444443333456666788999999999999988874210    01368999999998877765532          


Q ss_pred             cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC--
Q 010842          186 MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD--  263 (499)
Q Consensus       186 ~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id--  263 (499)
                       ++..|+++.++|..+...++..|.   .++.++++.+++|.+|+++|++++.+++      .+|+.+.++||||.+-  
T Consensus       104 -~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~~p~NPtG~~~s~  173 (378)
T PRK07682        104 -PGDEVLIVEPSFVSYAPLVTLAGG---VPVPVATTLENEFKVQPAQIEAAITAKT------KAILLCSPNNPTGAVLNK  173 (378)
T ss_pred             -CCCEEEEeCCCchhhHHHHHHcCC---EEEEeecCCccCCCCCHHHHHhhcCccc------EEEEEECCCCCcCcCcCH
Confidence             566788899999999999999999   8999998754457999999999886543      3677788999999994  


Q ss_pred             -ChhHHHHHHHHhCCEEEeeccccchhccCccchh--hhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC
Q 010842          264 -NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH--YLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST  339 (499)
Q Consensus       264 -~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~--~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~  339 (499)
                       ++++|+++|++|++++++|.+|+.+.... ....  .+.+...-..+..+..|.++.| ..+|+++..+.  +.+.+..
T Consensus       174 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~--~i~~l~~  250 (378)
T PRK07682        174 SELEEIAVIVEKHDLIVLSDEIYAELTYDE-AYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVY--FSEAMLK  250 (378)
T ss_pred             HHHHHHHHHHHHcCcEEEEehhhhhcccCC-CCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHH--HHHHHHH
Confidence             48899999999999999999998764321 1111  1112222346777889999855 45888887543  2222221


Q ss_pred             CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCc
Q 010842          340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHF  417 (499)
Q Consensus       340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~  417 (499)
                      ...+...                    ....+...++...+  |...+++..++..+.++++.+.|++. ++++. +|..
T Consensus       251 ~~~~~~~--------------------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~p~g  308 (378)
T PRK07682        251 IHQYSMM--------------------CAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCH-VPGG  308 (378)
T ss_pred             HHHhhcc--------------------CCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCe
Confidence            1111000                    01123334444444  34556777788888899999999987 77654 4544


Q ss_pred             eEEEE-EecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          418 ALVCF-RLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       418 ~~v~f-~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +.+.| .+.+..      .+  ..++.+.+. ++|+.+..+..+.  +..++|++++   ++++++++.+++|+++.+++
T Consensus       309 ~~~~~~~~~~~~------~~--~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~---~~~~~l~~~l~~l~~~l~~~  377 (378)
T PRK07682        309 AFYAFPSISSTG------LS--SEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYA---TSLEQLQEAMKRMKRFVENK  377 (378)
T ss_pred             eEEEEEeccCCC------CC--HHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeC---CCHHHHHHHHHHHHHHHhhc
Confidence            44444 332211      01  345666665 5676554443332  3578999996   36899999999999887653

>PRK05937 8-amino-7-oxononanoate synthase; Provisional

Probab=99.87  E-value=1.7e-19  Score=182.11  Aligned_cols=339  Identities=12%  Similarity=0.036  Sum_probs=203.9

Q ss_pred             CCCCCCccccccCCCCCChHHHHHHHHHHHcccC---CcccccCh---hhHHHHHHHHHHHHHHcCCCCccccCCCccEE
Q 010842           84 ITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSV---GFNWLASP---ASTELEIVVMDWLATMLKLPKTFMFSGTGGGV  157 (499)
Q Consensus        84 ~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~---~~~~~~~p---~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~  157 (499)
                      .+.|.+-.|+|+-..++..++ +.+.+..+..+.   +.+...+.   +...+-.++.+.+++++|.+..         +
T Consensus         6 ~~~~~s~~YL~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~~---------l   75 (370)
T PRK05937          6 SIDFVTNDFLGFSRSDTLVHE-VEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEA---------F   75 (370)
T ss_pred             eEEeECCCccCCCCCHHHHHH-HHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCeE---------E
Confidence            345677778888755443333 344444433211   12222222   2455556667779999998654         6


Q ss_pred             EcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHH
Q 010842          158 IQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAV  237 (499)
Q Consensus       158 ~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i  237 (499)
                      +.++|+.||+. +..+...          ++..|+.+...|.|+..+++.+.-   ..+.++       ..|+++|++.|
T Consensus        76 ~~~sG~~a~~~-~~~~~~~----------~~d~ii~d~~~H~sv~~~~~~~~~---~~~~~~-------~~d~~~l~~~l  134 (370)
T PRK05937         76 IVPSGYMANLG-LCAHLSS----------VTDYVLWDEQVHISVVYSLSVISG---WHQSFR-------HNDLDHLESLL  134 (370)
T ss_pred             EECChHHHHHH-HHHHhCC----------CCCEEEEEhhhhHHHHHHHHHcCC---ceEEec-------CCCHHHHHHHH
Confidence            66677788863 3222110          356788889999999999888642   333332       46999999999


Q ss_pred             HHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEeccccc
Q 010842          238 EADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKW  315 (499)
Q Consensus       238 ~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~  315 (499)
                      ++..+.+....+|++...++++|.+.|+++|+++|+++|+++|||+||+.+.+..+ ....  ..+....+.+..+.+|.
T Consensus       135 ~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~-g~g~~~~~~~~~~~~~~~tlsK~  213 (370)
T PRK05937        135 ESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDD-GKGFCHSLGYENFYAVLVTYSKA  213 (370)
T ss_pred             HhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCC-CCchHHhhCCCCCcEEEEechhh
Confidence            86543222334677788999999999999999999999999999999986543221 1111  11222334556677798


Q ss_pred             ccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHH
Q 010842          316 LLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRL  395 (499)
Q Consensus       316 l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~  395 (499)
                      ++ |.|+|+++.++.  .........+|.+...                ........+..++..+...+ +...++..++
T Consensus       214 ~g-~~G~~vl~~~~~--~~~~~~~~~~~~~s~~----------------~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l  273 (370)
T PRK05937        214 LG-SMGAALLSSSEV--KQDLMLNSPPLRYSTG----------------LPPHLLISIQVAYDFLSQEG-ELARKQLFRL  273 (370)
T ss_pred             hh-cCceEEEcCHHH--HHHHHHhCCCCeecCC----------------CCHHHHHHHHHHHHHHHhCc-HHHHHHHHHH
Confidence            86 567777665431  1111111122222110                01112233445555553333 3456777888


Q ss_pred             HHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCc
Q 010842          396 AKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTD  475 (499)
Q Consensus       396 a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t  475 (499)
                      ++++.+.|....       +. ..+.+.+...          ....+.+.|.++|. ++.........++|+++ +..+|
T Consensus       274 ~~~l~~~l~~~~-------~~-~~~~i~~~~~----------~~~~~~~~L~~~gi-~v~~~~~~~~~~iRis~-~~~~t  333 (370)
T PRK05937        274 KEYFAQKFSSAA-------PG-CVQPIFLPGI----------SEQELYSKLVETGI-RVGVVCFPTGPFLRVNL-HAFNT  333 (370)
T ss_pred             HHHHHHhcCCCC-------CC-CEEEEEeCCh----------hHHHHHHHHHHCCe-eEEeeCCCCCCEEEEEc-CCCCC
Confidence            888888776421       00 1122344321          13567777878885 33322222335799999 59999


Q ss_pred             HHHHHHHHHHHHHHHHHHh
Q 010842          476 ERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       476 ~~di~~l~~~l~~~~~~l~  494 (499)
                      ++||++++++|+++.+++.
T Consensus       334 ~edid~l~~~L~~~~~~~~  352 (370)
T PRK05937        334 EDEVDILVSVLATYLEKYQ  352 (370)
T ss_pred             HHHHHHHHHHHHHHHHHhC
Confidence            9999999999999887653

>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional

Probab=99.87  E-value=3.9e-20  Score=186.91  Aligned_cols=332  Identities=12%  Similarity=0.074  Sum_probs=208.3

Q ss_pred             HHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc
Q 010842          107 GEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM  186 (499)
Q Consensus       107 ~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~  186 (499)
                      .+.+...+...  .+..+|...++|++    +++++|.+..         ++++|||+|+..++.+..-.          
T Consensus        17 ~~~~~~~l~~~--~~~~g~~~~~le~~----la~~~g~~~~---------v~~~sgt~al~lal~al~~~----------   71 (379)
T PRK11658         17 LAAVKEVLRSG--WITTGPKNQALEQA----FCQLTGNQHA---------IAVSSATAGMHITLMALGIG----------   71 (379)
T ss_pred             HHHHHHHHHcC--CccCCHhHHHHHHH----HHHHhCCCeE---------EEECCHHHHHHHHHHHcCCC----------
Confidence            34444445432  22347878888888    8888887643         88999999998888765211          


Q ss_pred             CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChh
Q 010842          187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVE  266 (499)
Q Consensus       187 ~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~  266 (499)
                      ++..|+++..+|.+...++...|+   .++.++++.+ ++.+|+++|++++.++++      +|+.   ++++|...|++
T Consensus        72 ~Gd~Viv~~~~~~~~~~~~~~~G~---~~v~vd~~~~-~~~~d~~~l~~~i~~~tk------av~~---~~~~G~~~d~~  138 (379)
T PRK11658         72 PGDEVITPSLTWVSTLNMIVLLGA---TPVMVDVDRD-TLMVTPEAIEAAITPRTK------AIIP---VHYAGAPADLD  138 (379)
T ss_pred             CCCEEEECCCcHHHHHHHHHHcCC---EEEEEecCCC-cCCcCHHHHHHhcccCCe------EEEE---eCCCCCcCCHH
Confidence            567899999999999999999999   9999999865 378999999999976543      4553   34689999999


Q ss_pred             HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhh--cCCccCC
Q 010842          267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL--STDPEYL  344 (499)
Q Consensus       267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~--~~~~~yl  344 (499)
                      +|+++|+++|+++++|+||+.+.......    .+-...+.++++++|.+.++ ..|++++++++...+..  .....+.
T Consensus       139 ~i~~~a~~~gi~vi~D~a~a~g~~~~~~~----~g~~g~~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~~~~~G~~~  213 (379)
T PRK11658        139 AIRAIGERYGIPVIEDAAHAVGTYYKGRH----IGARGTAIFSFHAIKNITCA-EGGLVVTDDDELADRLRSLKFHGLGV  213 (379)
T ss_pred             HHHHHHHHcCCeEEEECCCccCCeECCee----cCCCCCEEEeCCCCCcCccc-CceEEEECCHHHHHHHHHHHHcCCCc
Confidence            99999999999999999998543322111    12123578899999998654 45666666655433221  1111111


Q ss_pred             CCCCC-CCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----Cce
Q 010842          345 KNKPS-ESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----HFA  418 (499)
Q Consensus       345 ~~~~~-~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----~~~  418 (499)
                      ..... .....+.+..+  ..+..++...+-+++.....+++++..++..++++++.+.|+++|...+..+.     ...
T Consensus       214 ~~~~~~~~~~~~~~~~~--~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~  291 (379)
T PRK11658        214 DAFDRQTQGRAPQAEVL--TPGYKYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWH  291 (379)
T ss_pred             chhhhhcccCCCcceee--ccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEE
Confidence            00000 00000011101  12222333344455555556899999999999999999999988643232221     123


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEE---Eeee----EC--------------CEEEEEEeccCCCCcHH
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYL---THTI----VG--------------GLYMLRFAVGASLTDER  477 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~----~~--------------g~~~lRi~~~~~~~t~~  477 (499)
                      .+++++.+..      ......++.+.|.++|+..-   .+..    +.              ....+.+- +++..|++
T Consensus       292 ~~~~~~~~~~------~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP-~~~~l~~~  364 (379)
T PRK11658        292 LFIIRVDEER------CGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLP-LFPDMTDA  364 (379)
T ss_pred             EEEEEECCcc------ccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEcc-CCCCCCHH
Confidence            4555654311      00114567777777774211   1100    00              01223333 36889999


Q ss_pred             HHHHHHHHHHHHH
Q 010842          478 HVVAAWELIMEGA  490 (499)
Q Consensus       478 di~~l~~~l~~~~  490 (499)
                      |+++++++|+++.
T Consensus       365 ~~~~i~~~i~~~~  377 (379)
T PRK11658        365 DVDRVITALQQIA  377 (379)
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999864

>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional

Probab=99.87  E-value=2.1e-19  Score=188.94  Aligned_cols=334  Identities=10%  Similarity=0.005  Sum_probs=214.6

Q ss_pred             HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcC--CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLK--LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA  180 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g--~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~  180 (499)
                      |..+.+.+...+.. ...|....+..++.+++.+++.+..+  ++.+       ..++|+|+++++..++.+..+     
T Consensus       164 p~~~~~~~~~~~~~-~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~-------~I~it~G~~eal~~~~~~l~~-----  230 (517)
T PRK13355        164 PDEVVYDMAQQLTD-TEGYSDSKGLFSARKAIMQYAQLKGLPNVDVD-------DIYTGNGVSELINLSMSALLD-----  230 (517)
T ss_pred             CHHHHHHHHHHhhc-CCCCCCCcChHHHHHHHHHHHHhcCCCCCChh-------HEEEeCcHHHHHHHHHHHhCC-----
Confidence            33333434443432 34577777788999998888876543  2332       468999999998887766532     


Q ss_pred             hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842          181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT  260 (499)
Q Consensus       181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G  260 (499)
                            ++..|+++.++|..+..++...|.   +++.++++++++|.+|+++|++++.++++      +|+++.++||||
T Consensus       231 ------~Gd~Vli~~P~y~~y~~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~~~k------~i~i~nP~NPTG  295 (517)
T PRK13355        231 ------DGDEVLIPSPDYPLWTACVNLAGG---TAVHYRCDEQSEWYPDIDDIRSKITSRTK------AIVIINPNNPTG  295 (517)
T ss_pred             ------CCCEEEEcCCCCcCHHHHHHHCCC---EEEEeecCcccCCCCCHHHHHHhcCcCce------EEEEECCCCCCC
Confidence                  567899999999999999999999   99999998766799999999998876543      788889999999


Q ss_pred             ccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeE-ecccccccCC-CcceEEEEeC-chh--
Q 010842          261 AVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFS-FSPHKWLLSY-LDCCCLWVKQ-PGL--  332 (499)
Q Consensus       261 ~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~-~~~hK~l~~p-~~~g~l~~r~-~~~--  332 (499)
                      .+-+   +++|+++|++|++++++|++|..+.+....+.....-....-.++ .+..|.++.| .-+|+++... +..  
T Consensus       296 ~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~  375 (517)
T PRK13355        296 ALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAK  375 (517)
T ss_pred             cCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHH
Confidence            9966   889999999999999999999865432111112111111122343 4568987554 5689988643 221  


Q ss_pred             -HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-HHHHHH---HHHHHHHHHHHHHHHhcCC
Q 010842          333 -LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-LNLQSH---IRSDIRLAKMFEGFVKSDP  407 (499)
Q Consensus       333 -l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~---~~~~~~~a~~l~~~L~~~~  407 (499)
                       +...+..... ...                    .......+++...+.. ..+++.   .++..+.++++.+.|+++|
T Consensus       376 ~~~~~l~~~~~-~~~--------------------~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~  434 (517)
T PRK13355        376 DYIEGLNMLAN-MRL--------------------CSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIP  434 (517)
T ss_pred             HHHHHHHHHhc-CcC--------------------CcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence             1111110000 000                    0123444555554421 112222   2345566788999999988


Q ss_pred             CeEEEcCCCceEEEE-EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHH
Q 010842          408 RFEIVVPRHFALVCF-RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWE  484 (499)
Q Consensus       408 ~~~~~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~  484 (499)
                      ++++. +|..+.+.| ++.... ..   .......+.+.|.++|+++..+..+.  +..++|++++   .+++++++.++
T Consensus       435 g~~~~-~p~g~fy~~~~l~~~~-~~---~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~---~~~~~l~~a~~  506 (517)
T PRK13355        435 GISAV-KPKAAFYIFPKIDVKK-FN---IHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL---PRLEDLEDAMD  506 (517)
T ss_pred             CcccC-CCCeeeEEEeecCccc-CC---CCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC---CCHHHHHHHHH
Confidence            98865 566666666 443210 00   00011223344566776665555553  4678999995   57899999999


Q ss_pred             HHHHHHHHH
Q 010842          485 LIMEGADRL  493 (499)
Q Consensus       485 ~l~~~~~~l  493 (499)
                      .|.++.+..
T Consensus       507 rl~~~~~~~  515 (517)
T PRK13355        507 RLADFFSYY  515 (517)
T ss_pred             HHHHHHHHh
Confidence            999887643

>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1

Probab=99.87  E-value=4.3e-20  Score=183.11  Aligned_cols=367  Identities=13%  Similarity=0.087  Sum_probs=195.2

Q ss_pred             hhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHH-HHH--HHc---ccCCcccccC
Q 010842           51 PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGE-MLC--ACF---NSVGFNWLAS  124 (499)
Q Consensus        51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~l~--~~~---n~~~~~~~~~  124 (499)
                      |++++..-+..+|+ +.++.++++++.++..+|..   ...|+|--......|+.+.+ ++.  .++   .+++...+++
T Consensus        32 P~~i~~~~~~~lp~-~~sE~e~~r~~~~la~kN~~---~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQpEisQG  107 (429)
T PF02347_consen   32 PEEIRLKKPLNLPE-PLSEYELLRHLERLASKNKS---YTSFIGAGSYTHYVPAVIDRNILSRPEFYTAYTPYQPEISQG  107 (429)
T ss_dssp             -GGG-SS-----------HHHHHHHHHHHHTTS-----TTS---CTTT-----HHHHH-HHCCHHCCCS-STTSGGGBHH
T ss_pred             CHhhcCCCCCCCCC-CCCHHHHHHHHHHHHhcCCC---CCccccccccCceeChhhcCccccChhhhccCCCCCcHHHHH
Confidence            67776655667774 48999999999998877765   45577755555667777777 442  223   3334333444


Q ss_pred             hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842          125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka  204 (499)
                      .....+|.+  .++++++|++..       +..+..++|.+- .|+.++.+...+       ++-+|++|...|+.....
T Consensus       108 ~Lq~lfe~Q--s~i~eLTGmdva-------NaSlyd~atA~a-Ea~~ma~r~~~~-------~~~~vlv~~~~hP~~~~v  170 (429)
T PF02347_consen  108 RLQALFEYQ--SMICELTGMDVA-------NASLYDGATAAA-EAMLMAVRATKR-------KRNKVLVPESLHPQTRAV  170 (429)
T ss_dssp             HHHHHHHHH--HHHHHHHTSSEE--------SEBSSCCHHHH-HHHHHHHHHHTT----------EEEEETTS-CHHHHH
T ss_pred             HHHHHHHHH--HHHHHhhCCCcc-------CCCCCChhHHHH-HHHHHHHHhccc-------CCcEEEEcCCcChhhHHH
Confidence            444555555  779999999864       236677777332 233222221100       234689999999998776


Q ss_pred             HHH----hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842          205 CKL----AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH  280 (499)
Q Consensus       205 ~~~----~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh  280 (499)
                      ++.    .|+   +++.+|+++++  ..|              ......|+++.|++ .|.++++++|++++|++|..++
T Consensus       171 ~~t~a~~~g~---~iv~~~~~~~~--~~d--------------~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~gal~~  230 (429)
T PF02347_consen  171 LRTYAAPLGI---EIVEVPLDEDG--TTD--------------DDDTAAVMVQNPNT-FGVFEDIKEIADIAHAAGALVI  230 (429)
T ss_dssp             HHHHCCHCCE---EEEEE-BBTTC--SB---------------STTEEEEEEESS-T-TSB--THHHHHHHHHHTT-EEE
T ss_pred             HHHhhhhCCe---EEEEecccccC--Ccc--------------ccCeEEEEeecCCC-CceEeeHHHHHHHHHHcCCEEE
Confidence            554    577   89999988655  556              22356888888876 8999999999999999999998


Q ss_pred             eeccccchhccCccchhhhcCCCCCceeEecccccccCCC-----cceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842          281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-----DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV  355 (499)
Q Consensus       281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-----~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  355 (499)
                      + ++--.........     |--+||.+ +.-||.|+.|.     ++|++.+|+.  +   ....|..+.+...+..+..
T Consensus       231 ~-~ad~~aL~~l~~P-----ge~GADI~-vg~~Q~fg~p~~~GGP~~G~~a~~~~--l---~r~lPGRiVG~t~D~~G~~  298 (429)
T PF02347_consen  231 V-GADPNALGGLKSP-----GEYGADIV-VGEHQTFGIPMGFGGPGAGFFAVRED--L---VRQLPGRIVGQTKDADGKR  298 (429)
T ss_dssp             E-CGGCCGCCTC--G-----GGGT-SEE-EECCTTTT---CCC-S--EEEEE-GG--G---GGGS-S-EEEEEEBCCCSC
T ss_pred             E-ecCHHHHhCcCCh-----hhcCccEE-eeCCCCCcccCCCCCCCeeeEEEhhh--h---hhhCCCceecccccccccc
Confidence            7 6543322221111     11149999 45588887773     4788988885  2   2334555544322222222


Q ss_pred             cCCCcccC----CCCCC------------CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceE
Q 010842          356 DFKDWQVG----TGRRF------------KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFAL  419 (499)
Q Consensus       356 ~~~~~~~~----~sr~~------------~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~  419 (499)
                      .|. .+++    .-||-            -++..++.+..+|.+|+++..++...+|+|+++.|++..++.+ ..+.+..
T Consensus       299 ~~~-ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~-~~~~f~e  376 (429)
T PF02347_consen  299 AFV-LTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPF-DNPFFFE  376 (429)
T ss_dssp             CEE-EE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECS-SSSSBSS
T ss_pred             eee-eccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-CCCCcee
Confidence            211 0111    11121            1345677788899999999999999999999999999744433 3344443


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI  486 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l  486 (499)
                      ..+...+.         ....++.++....|   +....... ..+-+|++ ..+|++|||.+++++
T Consensus       377 ~v~~~~~~---------~~~~~l~~~~~~~g---l~~~~~~~-~~~li~~T-E~~t~edid~lv~~f  429 (429)
T PF02347_consen  377 FVVVFSKD---------KEVEELLKRGIEGG---LNLRYPDD-GALLICVT-ETRTKEDIDRLVEAF  429 (429)
T ss_dssp             EEEEESS----------HHHHHHHHTT-------EEEGGG-S-SEEEEE---TT--HHHHHHHHH--
T ss_pred             eeeecCCc---------HHHHHHHHHHHhcC---CCccccCC-CeEEEEcc-CCCCHHHHHHHHhcC
Confidence            33333221         11223666666666   22222222 26889996 999999999999875

4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.

>PRK00011 glyA serine hydroxymethyltransferase; Reviewed

Probab=99.86  E-value=1.1e-19  Score=186.55  Aligned_cols=308  Identities=13%  Similarity=0.046  Sum_probs=194.2

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK  203 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k  203 (499)
                      .+....+|+.+++++++++|.+...        +++++||+|+..++.+...           ++..|+++..+|.++..
T Consensus        66 ~~~~~~~e~~~~~~la~~~g~~~~~--------i~~~sgt~al~~~l~~l~~-----------~gd~Vl~~~~~~~~~~~  126 (416)
T PRK00011         66 CEYVDVVEQLAIDRAKELFGAEYAN--------VQPHSGSQANAAVYFALLK-----------PGDTILGMDLAHGGHLT  126 (416)
T ss_pred             chHHHHHHHHHHHHHHHHhCCCcee--------eecCCchHHHHHHHHHhcC-----------CCCEEEEeccccCCccc
Confidence            3456778887888999999997652        5555678888776665521           56678888888865422


Q ss_pred             ---HH--HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          204 ---VC--KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       204 ---a~--~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                         ..  ...|+   +++.+|++.+ ++.+|+++|++++++..     |.+|+++.  +.+|...|+++|+++|+++|++
T Consensus       127 ~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~k~v~~~~--~~~~~~~~~~~I~~la~~~~~~  195 (416)
T PRK00011        127 HGSPVNFSGKLY---NVVSYGVDEE-TGLIDYDEVEKLALEHK-----PKLIIAGA--SAYSRPIDFKRFREIADEVGAY  195 (416)
T ss_pred             ccccccccccee---eEeecCcCcc-cCCcCHHHHHHHHHhcC-----CCEEEECC--CcCCCccCHHHHHHHHHHcCCE
Confidence               11  22344   7788888743 36899999999997521     22454432  3567778999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK  358 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  358 (499)
                      +++|+||+.+..........   +..+|.++.++||++.+|. +|+++.++++...+.......+...            
T Consensus       196 livD~a~~~g~~~~g~~~~~---~~~~di~~~S~~K~l~g~~-gg~i~~~~~~~~~~l~~~~~~~~~~------------  259 (416)
T PRK00011        196 LMVDMAHIAGLVAAGVHPSP---VPHADVVTTTTHKTLRGPR-GGLILTNDEELAKKINSAVFPGIQG------------  259 (416)
T ss_pred             EEEECcchhcccccCccCCC---CCCCcEEEecCCcCCCCCC-ceEEEeCCHHHHHHHHHHhCccccC------------
Confidence            99999986543321111111   1258999999999997665 4566665544332221111111100            


Q ss_pred             CcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CCCceEEEEEecCCCCCCcchhH
Q 010842          359 DWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PRHFALVCFRLNPYPHSGSADTE  436 (499)
Q Consensus       359 ~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~  436 (499)
                            +... ....++.++.....+++++++++..++++++++.|++. ++++.. .+..+++.+.+.+..      . 
T Consensus       260 ------~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~~~------~-  325 (416)
T PRK00011        260 ------GPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVLVDLRSKG------L-  325 (416)
T ss_pred             ------CccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEEEeCcccC------C-
Confidence                  0001 11223334434445678889999999999999999986 788763 234466666664321      0 


Q ss_pred             HHHHHHHHHHHhcCCEEEEee-eE-----CCEEEEEEeccC---CCCcHHHHHHHHHHHHHHHHH
Q 010842          437 MLNRKLLDWVNSTGRVYLTHT-IV-----GGLYMLRFAVGA---SLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       437 ~~~~~l~~~l~~~g~~~~~~~-~~-----~g~~~lRi~~~~---~~~t~~di~~l~~~l~~~~~~  492 (499)
                       ....+.+.|.+.|+.+-... .+     .....+|++...   ...|++|+++++++|+++...
T Consensus       326 -~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~  389 (416)
T PRK00011        326 -TGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN  389 (416)
T ss_pred             -CHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence             13456677777786542110 11     123458986521   245799999999999987553

>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]

Probab=99.86  E-value=2.5e-19  Score=170.32  Aligned_cols=334  Identities=15%  Similarity=0.082  Sum_probs=232.7

Q ss_pred             hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      .|..+.+.+....+...++|.  -....+-+++.+|.++..++....     ...++++|---++.+++.+.    .+  
T Consensus        39 ~pp~i~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~-----e~i~~~p~VVpgi~~~I~~~----T~--  105 (388)
T COG1168          39 TPPEIIEALRERVDHGVFGYP--YGSDELYAAIAHWFKQRHQWEIKP-----EWIVFVPGVVPGISLAIRAL----TK--  105 (388)
T ss_pred             CCHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCc-----ceEEEcCcchHhHHHHHHHh----Cc--
Confidence            345577788888887777776  334668999999999999985321     13455655444444444333    22  


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC-CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS-VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT  260 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~-~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G  260 (499)
                           ++..|++..+.++.+.++....|-   +++..|.- +++.|.||.++||+++.+..     +.+.+.+.|.||+|
T Consensus       106 -----~gd~Vvi~tPvY~PF~~~i~~n~R---~~i~~pL~~~~~~y~iD~~~LE~~~~~~~-----vkl~iLCnPHNP~G  172 (388)
T COG1168         106 -----PGDGVVIQTPVYPPFYNAIKLNGR---KVIENPLVEDDGRYEIDFDALEKAFVDER-----VKLFILCNPHNPTG  172 (388)
T ss_pred             -----CCCeeEecCCCchHHHHHHhhcCc---EEEeccccccCCcEEecHHHHHHHHhcCC-----ccEEEEeCCCCCCC
Confidence                 566777888899999999999999   99999887 56679999999999998753     23788999999999


Q ss_pred             cc---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhh---cCCCCCceeEecccccccCC-CcceEEEEeCchhH
Q 010842          261 AV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL---NGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLL  333 (499)
Q Consensus       261 ~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~---~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l  333 (499)
                      .+   +.|.+|++||++||+.++.|..|+-..+....+-...   .....--..+.++.|.++.+ ..|+.+++.|++..
T Consensus       173 rvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr  252 (388)
T COG1168         173 RVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELR  252 (388)
T ss_pred             ccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHH
Confidence            99   8899999999999999999999987655432221111   11111224556679999876 66888888887643


Q ss_pred             HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHH--HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeE
Q 010842          334 VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRL--WMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS-DPRFE  410 (499)
Q Consensus       334 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~--~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~  410 (499)
                      .+..... ......                   ...++.+  +.+.-..|.+++.+.++...++.+++.+.+.+ +|+++
T Consensus       253 ~~~~~~l-~~~~~~-------------------~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~  312 (388)
T COG1168         253 AKFLKRL-KRNGLH-------------------GPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVK  312 (388)
T ss_pred             HHHHHHH-HHhcCC-------------------CCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcE
Confidence            2222111 111110                   1123433  33333458999999999999999999999976 68999


Q ss_pred             EEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee-E--CCEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          411 IVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI-V--GGLYMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       411 ~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~--~g~~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                      +..+.........+.+.+.        ...++.+.|..+.++.+..+. +  .|++++|+.+.   ++++-+++.++.|+
T Consensus       313 v~~p~gTYL~WLD~r~l~l--------~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~a---cpr~~L~eal~ri~  381 (388)
T COG1168         313 VTEPQGTYLAWLDCRELGL--------DDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFA---CPRAILEEALERLK  381 (388)
T ss_pred             EecCCCceeeeeeccccCC--------ChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecC---CCHHHHHHHHHHHH
Confidence            8866666666666665331        124566777777777776544 3  35689998776   67778888888887


Q ss_pred             HHHHH
Q 010842          488 EGADR  492 (499)
Q Consensus       488 ~~~~~  492 (499)
                      ...+.
T Consensus       382 ~al~~  386 (388)
T COG1168         382 RALKK  386 (388)
T ss_pred             HHHhc
Confidence            66543

>cd00615 Orn_deC_like Ornithine decarboxylase family

Probab=99.86  E-value=1.3e-20  Score=183.92  Aligned_cols=224  Identities=17%  Similarity=0.086  Sum_probs=155.0

Q ss_pred             HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC
Q 010842          134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA  213 (499)
Q Consensus       134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~  213 (499)
                      +.+.+++++|.+..+        ++++|+|+++..++.+...           ++..|+++..+|.|+..++...|+   
T Consensus        64 ~~~~~A~~~ga~~~~--------~~~~Gst~a~~~~l~al~~-----------~gd~Vlv~~~~h~s~~~~~~~~g~---  121 (294)
T cd00615          64 AQELAARAFGAKHTF--------FLVNGTSSSNKAVILAVCG-----------PGDKILIDRNCHKSVINGLVLSGA---  121 (294)
T ss_pred             HHHHHHHHhCCCCEE--------EEcCcHHHHHHHHHHHcCC-----------CCCEEEEeCCchHHHHHHHHHCCC---
Confidence            344489999987653        5689999999888776532           577899999999999999999999   


Q ss_pred             CeEEeeCCCCCC----CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchh
Q 010842          214 NIRALPTSVDAN----FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSA  289 (499)
Q Consensus       214 ~v~~v~~~~~~~----~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~  289 (499)
                      ++++++.+.+..    +.+|++++++++++..    .+.+|+++.+ |++|.+.|+++|+++|+++|++++||+||+...
T Consensus       122 ~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~----~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~  196 (294)
T cd00615         122 VPVYLKPERNPYYGIAGGIPPETFKKALIEHP----DAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHF  196 (294)
T ss_pred             EEEEecCccCcccCcCCCCCHHHHHHHHHhCC----CceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhh
Confidence            999998765432    3799999999987521    2457777876 679999999999999999999999999998765


Q ss_pred             ccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC-C
Q 010842          290 CICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR-F  368 (499)
Q Consensus       290 ~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~  368 (499)
                      .+.+....... ...+|.++.++||++.++.++|++++++.......+..... +.                 +.+.+ .
T Consensus       197 ~~~~~~~~~~~-~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~~-~~-----------------~ttsps~  257 (294)
T cd00615         197 RFHPILPSSAA-MAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEALN-LH-----------------QSTSPSY  257 (294)
T ss_pred             ccCcccCcchh-hcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHHH-HH-----------------CCCCcHH
Confidence            44332221111 12599999999999988888888888765211111111000 00                 11111 1


Q ss_pred             C-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh
Q 010842          369 K-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVK  404 (499)
Q Consensus       369 ~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~  404 (499)
                      . ...+-.+++.+..+| ++++++..+++++++++|.
T Consensus       258 ~~~asl~~a~~~~~~~g-~~~~~~~~~~~~~~r~~l~  293 (294)
T cd00615         258 LILASLDVARAMMALEG-KELVEELIELALYARQEIN  293 (294)
T ss_pred             HHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHh
Confidence            1 123333444443344 4467788888999988875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.

>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional

Probab=99.86  E-value=7.8e-19  Score=180.41  Aligned_cols=333  Identities=14%  Similarity=0.088  Sum_probs=204.1

Q ss_pred             HHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc
Q 010842          106 LGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN  185 (499)
Q Consensus       106 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g  185 (499)
                      +.+...+++......|..+++..+||++    +++++|.+.         +++|+|||+|+..++.+..+          
T Consensus        59 ~~~a~~~a~~~g~~~Y~~~~g~~~Lrea----ia~~~~~~~---------vv~t~ggt~A~~~~~~all~----------  115 (460)
T PRK13238         59 MSDRQWAAMMRGDEAYAGSRSYYRLEDA----VKDIFGYPY---------TIPTHQGRAAEQILFPVLIK----------  115 (460)
T ss_pred             hhHHHHHHHHhCCcccCCCCCHHHHHHH----HHHHhCCCc---------EEECCCHHHHHHHHHHHhCC----------
Confidence            3444444443444578889999999998    666667643         49999999999988776532          


Q ss_pred             cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCC------CCCc--cCHHHHHHHHHHHHHcCCccEEEEEecCCC
Q 010842          186 MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVD------ANFS--LSPQLLRRAVEADVEAGLVPLFLCATVGTT  257 (499)
Q Consensus       186 ~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~------~~~~--~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt  257 (499)
                       ++. |+++...+.+....+.+.|.   .++.+|+++.      ..|.  +|+++|++.|.+...  .++.+|+++.++|
T Consensus       116 -pGD-Vii~~p~~~~~~~~i~~~G~---~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~--~~tk~Ivl~~p~N  188 (460)
T PRK13238        116 -KGD-VVPSNYHFDTTRAHIELNGA---TAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGA--ENVPFIVMTITNN  188 (460)
T ss_pred             -CCC-EEccCCcccchHHHHHHcCC---EEEEEeccccccccccccccCCcCHHHHHHHHhhcCC--CceeEEEEecCCC
Confidence             455 66676655556666888899   9999998641      2344  999999999975311  1245899999999


Q ss_pred             ccc-cc---CChhHHHHHHHHhCCEEEeeccccc-hhccCc----cchhh-hc-----CCCCCceeEecccccccCCCcc
Q 010842          258 STT-AV---DNVEPLAEVANEYGIWVHVDAAYAG-SACICP----EFRHY-LN-----GIERVDSFSFSPHKWLLSYLDC  322 (499)
Q Consensus       258 ~~G-~i---d~l~~I~~ia~~~~~~lhvD~A~g~-~~~~~~----~~~~~-~~-----g~~~aDsi~~~~hK~l~~p~~~  322 (499)
                      ++| .+   +++++|+++|++||+++++|+|+.. .+++..    .+... ..     -...+|++++++||.+++|.| 
T Consensus       189 ptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-  267 (460)
T PRK13238        189 SAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-  267 (460)
T ss_pred             CCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-
Confidence            998 44   5678999999999999999997733 122211    11110 00     013589999999999999875 


Q ss_pred             eEEEEeCchhHHHhhcCC---ccCCCCCCCCCCCcccCCCcccCCCCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 010842          323 CCLWVKQPGLLVKALSTD---PEYLKNKPSESNSVVDFKDWQVGTGRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKM  398 (499)
Q Consensus       323 g~l~~r~~~~l~~~~~~~---~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~  398 (499)
                      |++++++.+...+.-...   ..++.                 .++-... ..++..+++..-   -+..++...+.+++
T Consensus       268 G~i~~~d~~l~~~~~~~~~~~~g~~t-----------------~~g~~~~~~~Ala~~l~e~~---~~~~~~~~~~~~~~  327 (460)
T PRK13238        268 GLLCFRDEDLFTECRTLCILYEGFPT-----------------YGGLAGRDMEALAVGLYEGM---DEDYLAYRIGQVEY  327 (460)
T ss_pred             eEEEcChHHHHHHhhhcccccCCccc-----------------ccCcHHHHHHHHHhhHHHhh---ChHHHHHHHHHHHH
Confidence            888888755443221111   01110                 1111111 111111222110   12334444556789


Q ss_pred             HHHHHhcCCCeEEEcCCCceEEEEEecCCCC-CCcchhHHHHHHHHHHHH-hcCCEEEEeeeE-------CC------EE
Q 010842          399 FEGFVKSDPRFEIVVPRHFALVCFRLNPYPH-SGSADTEMLNRKLLDWVN-STGRVYLTHTIV-------GG------LY  463 (499)
Q Consensus       399 l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~-~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~-------~g------~~  463 (499)
                      |.+.|.+. |+.++.+.....+...+..... ......  -..+++.+|. +.|+..+..+.+       .+      ..
T Consensus       328 l~~~L~~~-G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~--~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~  404 (460)
T PRK13238        328 LGEGLEEA-GVPIQTPAGGHAVFVDAGKFLPHIPAEQF--PAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAE  404 (460)
T ss_pred             HHHHHHHC-CCCeEccCCceEEEEEchhcCCCCCCCCC--chHHHHHHHHHHcCeeeecccceecccCCCCccccCCccc
Confidence            99999886 8988865554444343322100 000000  0244555554 446544443322       12      47


Q ss_pred             EEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          464 MLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       464 ~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      .+|+++.-..-|.++++.+.++|+++.++
T Consensus       405 ~~Rla~~rr~~~~~~~~~~~~~l~~~~~~  433 (460)
T PRK13238        405 LLRLAIPRRVYTQSHMDYVAEALKAVKEN  433 (460)
T ss_pred             eEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence            89999963344899999999999988753

>PLN02822 serine palmitoyltransferase

Probab=99.86  E-value=1.2e-18  Score=180.46  Aligned_cols=333  Identities=11%  Similarity=0.071  Sum_probs=210.4

Q ss_pred             HHHHHHHHHcccCCcccccCh---hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          105 FLGEMLCACFNSVGFNWLASP---ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       105 ~~~~~l~~~~n~~~~~~~~~p---~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      .+.+.+...+..++.++..++   +......++.+.+++++|.++.        .++++|++ ++..++.+..+      
T Consensus       127 ~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~~--------i~~s~G~~-a~~sai~a~~~------  191 (481)
T PLN02822        127 KIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPDS--------ILYSYGLS-TIFSVIPAFCK------  191 (481)
T ss_pred             HHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCCCE--------EEECCHHH-HHHHHHHHhCC------
Confidence            344555555544333322221   2344455555559999987654        25555544 66665554421      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC---Ccc-EEEEEecCCC
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG---LVP-LFLCATVGTT  257 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g---~~p-~~vv~t~gtt  257 (499)
                           ++.+|++....|+++..++.+.|.   +++.++.+       |.++|+..+++..+..   ..+ .+|++....+
T Consensus       192 -----~gd~Ii~d~~~H~s~~~~~~ls~~---~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~  256 (481)
T PLN02822        192 -----KGDIIVADEGVHWGIQNGLYLSRS---TIVYFKHN-------DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQ  256 (481)
T ss_pred             -----CCCEEEEeCCccHHHHHHHHHcCC---eEEEECCC-------CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCC
Confidence                 566788899999999999999988   88888764       5667777776533221   122 5777878888


Q ss_pred             cccccCChhHHHHHHHHhCCEEEeeccccchhccCccchh--hhcCC--CCCceeEecccccccCCCcceEEEEeCchhH
Q 010842          258 STTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH--YLNGI--ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLL  333 (499)
Q Consensus       258 ~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~--~~~g~--~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l  333 (499)
                      ++|.+-|+++|+++|++||+++++|++|+.+.+ .+..+.  ...++  ...|.++.+..|.++.+  .|+++.+. +..
T Consensus       257 ~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvl-G~~G~G~~e~~~v~~~~~dii~~s~sKalg~~--GG~i~g~~-~ii  332 (481)
T PLN02822        257 NSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVL-GKSGRGLSEHFGVPIEKIDIITAAMGHALATE--GGFCTGSA-RVV  332 (481)
T ss_pred             CCCCccCHHHHHHHHHHcCCEEEEECCcccccc-CCCCCChHHHcCCCCCCCeEEEecchhhhhhC--CeEEEcCH-HHH
Confidence            899999999999999999999999999984432 211111  11233  35799999999999754  26666543 322


Q ss_pred             HHhhc-CCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 010842          334 VKALS-TDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRF  409 (499)
Q Consensus       334 ~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~  409 (499)
                       +.+. ....|.+..                 +.  .+..+.+   +++.+  +...++.++..++++++.+.|++.+++
T Consensus       333 -~~~~~~~~~~~fsa-----------------~l--Pp~~~~Aa~~aL~~l--~~~~~~~~~l~~~~~~l~~~L~~~~g~  390 (481)
T PLN02822        333 -DHQRLSSSGYVFSA-----------------SL--PPYLASAAITAIDVL--EDNPSVLAKLKENIALLHKGLSDIPGL  390 (481)
T ss_pred             -HHHHhcCCceeecc-----------------cc--CHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCc
Confidence             2222 122222211                 10  1222233   33332  223567888999999999999998888


Q ss_pred             EEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEe--eeEC---CEEEEEEeccCCCCcHHHHHHHH
Q 010842          410 EIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTH--TIVG---GLYMLRFAVGASLTDERHVVAAW  483 (499)
Q Consensus       410 ~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~--~~~~---g~~~lRi~~~~~~~t~~di~~l~  483 (499)
                      ++..++..+++.+.+.... ..........+++.++|. ++|..+...  ..+.   ....+|++++ ..+|++||++++
T Consensus       391 ~~~~~~~spi~~l~l~~~~-~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is-~~~t~edI~~~~  468 (481)
T PLN02822        391 SIGSNTLSPIVFLHLEKST-GSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVS-AGHTESDILKAS  468 (481)
T ss_pred             ccCCCCCCCEEEEEeCCCc-ccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEEC-CCCCHHHHHHHH
Confidence            8766667777777775321 000011234567888887 667544321  1221   2346999984 778999999999


Q ss_pred             HHHHHHHHHHhc
Q 010842          484 ELIMEGADRLFK  495 (499)
Q Consensus       484 ~~l~~~~~~l~~  495 (499)
                      ++|+++...+.+
T Consensus       469 ~~l~~~~~~~~~  480 (481)
T PLN02822        469 ESLKRVAASVLK  480 (481)
T ss_pred             HHHHHHHHHHhc
Confidence            999999887754

>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases

Probab=99.86  E-value=9.2e-19  Score=178.84  Aligned_cols=335  Identities=13%  Similarity=0.068  Sum_probs=211.2

Q ss_pred             HHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          104 GFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       104 ~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      ..+.+.+...+... ...|....+...+++++.+++....|.+-..     ...++|+|+|+|+..++.+...       
T Consensus        51 ~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-----~~ii~t~G~t~al~~~~~~l~~-------  118 (403)
T TIGR01265        51 PEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTA-----DDVVLTSGCSQAIEICIEALAN-------  118 (403)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCH-----HHEEEecChHHHHHHHHHHhCC-------
Confidence            34444554444322 2345455566677777666666544442110     1468999999999888877642       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|+++..+|..+...+...|+   +++.++++.++++.+|++++++++.++++      +|++++++|+||.+
T Consensus       119 ----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~~------~v~i~~p~NPtG~~  185 (403)
T TIGR01265       119 ----PGANILVPRPGFPLYDTRAAFSGL---EVRLYDLLPEKDWEIDLDGLEALADEKTV------AIVVINPSNPCGSV  185 (403)
T ss_pred             ----CCCEEEEeCCCchhHHHHHHHcCC---EEEEecCCcccCCccCHHHHHHHhCcCcc------EEEEecCCCCCCCC
Confidence                566788899999999999999999   99999886555578999999998865443      68888999999999


Q ss_pred             C---ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCC-CCc-eeEecccccccCC-CcceEEEEeCc-hhH--
Q 010842          263 D---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE-RVD-SFSFSPHKWLLSY-LDCCCLWVKQP-GLL--  333 (499)
Q Consensus       263 d---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-~aD-si~~~~hK~l~~p-~~~g~l~~r~~-~~l--  333 (499)
                      -   ++++|.++|+++|+|+++|++|+.+....+.+.. +..+. ... .++.+..|.++.| ..+|+++..++ ..+  
T Consensus       186 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~  264 (403)
T TIGR01265       186 FSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIP-MASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRD  264 (403)
T ss_pred             CCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccc-hhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHH
Confidence            5   4899999999999999999999876432211111 11111 112 4556789986655 66899887643 111  


Q ss_pred             --HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010842          334 --VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPR  408 (499)
Q Consensus       334 --~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~  408 (499)
                        .+.+.....+...                     ...+...+....+   ....+++..++..+.++++.+.|+..++
T Consensus       265 ~~~~~~~~~~~~~~~---------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~  323 (403)
T TIGR01265       265 TVLQGLKNLLQRILG---------------------PATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPG  323 (403)
T ss_pred             HHHHHHHHHhhhhcC---------------------CChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence              1111000000000                     0112222222222   2345667777788888899999998888


Q ss_pred             eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          409 FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       409 ~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                      +++..+...+.+.+++..... ..  . ....++.+++. +.|..+..+..+....++|++++   ..++.+++.++.|.
T Consensus       324 ~~~~~p~~g~f~~~~~~~~~~-~~--~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~---~~~~~l~~~l~~l~  396 (403)
T TIGR01265       324 LVCPKPEGAMYLMVKLELELF-PE--I-KDDVDFCEKLVREESVICLPGSAFGLPNWVRITIT---VPESMLEEACSRIK  396 (403)
T ss_pred             ceecCCCceeEEEEecccccc-CC--C-CCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEec---CCHHHHHHHHHHHH
Confidence            875545455555566543100 00  0 01345666654 56765555544544678999996   34778999998888


Q ss_pred             HHHHH
Q 010842          488 EGADR  492 (499)
Q Consensus       488 ~~~~~  492 (499)
                      ++.++
T Consensus       397 ~~~~~  401 (403)
T TIGR01265       397 EFCER  401 (403)
T ss_pred             HHHHh
Confidence            87754

This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.

>PRK07681 aspartate aminotransferase; Provisional

Probab=99.86  E-value=3.4e-19  Score=181.83  Aligned_cols=327  Identities=13%  Similarity=0.058  Sum_probs=213.4

Q ss_pred             HHHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          103 AGFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      +..+.+.+...++.. ...|. .++...+.+++.+|+.+..|.+-+.    ....++|+|+++|+..++.+..+      
T Consensus        47 ~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~----~~~I~it~G~~~al~~~~~~~~~------  115 (399)
T PRK07681         47 ADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNA----DKEVLLLMGSQDGLVHLPMVYAN------  115 (399)
T ss_pred             CHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCC----CCeEEECCCcHHHHHHHHHHhCC------
Confidence            344566666555432 22333 3567889999999999887763210    01468899999988776665432      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                           ++..|+++.++|..+...++.+|+   +++.||+++++.|.+|+++|++++.+++      .+|+.+.++||||.
T Consensus       116 -----~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~v~l~~P~NPTG~  181 (399)
T PRK07681        116 -----PGDIILVPDPGYTAYETGIQMAGA---TSYYMPLKKENDFLPDLELIPEEIADKA------KMMILNFPGNPVPA  181 (399)
T ss_pred             -----CCCEEEECCCCccchHHHHHhcCC---EEEEEecCCCCCCcCCHHHHHHhccccc------eEEEEeCCCCCcCc
Confidence                 567899999999999999999999   9999999876668899999999886543      37888889999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhc--CCCCCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842          262 VDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN--GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK  335 (499)
Q Consensus       262 id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~--g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~  335 (499)
                      +-+   +++|+++|++||+|+++|.+|+.+............  +...-..+..+..|.++.| .-+|+++.. +... +
T Consensus       182 ~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~-~~l~-~  259 (399)
T PRK07681        182 MAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGN-EEIV-R  259 (399)
T ss_pred             CCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecC-HHHH-H
Confidence            966   788999999999999999999876432111111111  1111235566889999744 558888753 3332 2


Q ss_pred             hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                      .+.....+...                    ....+...++...+  +.+.+++..+...++++++.+.|++. ++++..
T Consensus       260 ~~~~~~~~~~~--------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~  318 (399)
T PRK07681        260 ALTQFKSNTDY--------------------GVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-GWNVDK  318 (399)
T ss_pred             HHHHHHhhccc--------------------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccC
Confidence            22211111000                    01122333333333  33456666667777888899999887 777654


Q ss_pred             CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      +.....+++++.+..         ...++.+.+.+ .|+.+..+..+.  +..++|++++   .+++++++++++|++.
T Consensus       319 p~~g~f~~~~l~~~~---------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~---~~~~~~~~~l~~l~~~  385 (399)
T PRK07681        319 PAGSMFVWAEIPKGW---------TSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALV---QDEEVLQQAVENIRNS  385 (399)
T ss_pred             CCeeeEEEEECCCCC---------CHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEec---CCHHHHHHHHHHHHHh
Confidence            444444555554311         13456677766 675544443332  2468999996   4689999999999884

>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional

Probab=99.86  E-value=1.7e-18  Score=177.08  Aligned_cols=341  Identities=10%  Similarity=0.013  Sum_probs=220.0

Q ss_pred             hHHHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842          102 TAGFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA  180 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~  180 (499)
                      +|..+.+.+...++.. ...|....+...+.+++.+|+.+..|++-+.     ...++|+|+++++..++.+..+     
T Consensus        50 ~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~I~it~G~~~al~~~~~~l~~-----  119 (409)
T PLN00143         50 TTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSP-----DDVYLTLGCKHAAEIIIKVLAR-----  119 (409)
T ss_pred             CCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCH-----hhEEEecChHHHHHHHHHHHcC-----
Confidence            3445555555555433 2446666778889999999998887763221     2468999999998887776543     


Q ss_pred             hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842          181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT  260 (499)
Q Consensus       181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G  260 (499)
                            ++..|+++.+++..+...++..|.   +++.++++++.+|.+|+++|++++++++      ..++.+.++||||
T Consensus       120 ------~gd~v~v~~P~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~~~~~nP~NPTG  184 (409)
T PLN00143        120 ------PEANILLPRPGFPDVETYAIFHHL---EIRHFDLLPEKGWEVDLDAVEAIADENT------IAMVIINPGNPCG  184 (409)
T ss_pred             ------CCCEEEEcCCCCcCHHHHHHHcCC---EEEEEeccCCCCCcCCHHHHHHhcccCC------EEEEEECCCCCCC
Confidence                  567788999999999999999999   9999998644458999999998875433      3677888999999


Q ss_pred             ccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCC--ceeEecccccccCC-CcceEEEEeCchhHH
Q 010842          261 AVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERV--DSFSFSPHKWLLSY-LDCCCLWVKQPGLLV  334 (499)
Q Consensus       261 ~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~a--Dsi~~~~hK~l~~p-~~~g~l~~r~~~~l~  334 (499)
                      .+-+   +++|+++|++|++++++|.+|..+..-...... +..+...  -.++.+..|.++.| .-+|+++..++..+.
T Consensus       185 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~-~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~  263 (409)
T PLN00143        185 SVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVP-MGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLL  263 (409)
T ss_pred             CccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcc-hhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhh
Confidence            9966   778888999999999999999876432111111 1111111  24567789996555 668999885442221


Q ss_pred             H------hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhc
Q 010842          335 K------ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKS  405 (499)
Q Consensus       335 ~------~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~  405 (499)
                      +      .+......  .                .++   ..+...++...+   ....+++..++..+..+++.+.|++
T Consensus       264 ~~~~~~~~~~~~~~~--~----------------~~~---~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~  322 (409)
T PLN00143        264 QICEIADSIKKALNP--A----------------PFP---PTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKE  322 (409)
T ss_pred             hhHHHHHHHHHHHhc--c----------------CCC---CchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            1      11100000  0                000   123333333333   2356778888888888888899988


Q ss_pred             CCCeEEEcCCCc-eEEEEEecCCCCCCcchhHHHHHHHHHHH-HhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHH
Q 010842          406 DPRFEIVVPRHF-ALVCFRLNPYPHSGSADTEMLNRKLLDWV-NSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAW  483 (499)
Q Consensus       406 ~~~~~~~~~~~~-~~v~f~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~  483 (499)
                      +++.....+|.. ..+++++.... ...  . ....++..++ .+.|..+..+..+....++|++++   ++++++++.+
T Consensus       323 ~~~~~~~~~p~gg~f~w~~l~~~~-~~~--~-~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~---~~~~~l~~al  395 (409)
T PLN00143        323 IPCIMCPQKAEGAFFALVKLNLLL-LED--I-EDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFA---VEQSSLEDGL  395 (409)
T ss_pred             CCCCCCCCCCCeeEEEEEecchhh-cCC--C-CCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEc---CCHHHHHHHH
Confidence            765433334443 44455553210 000  0 0123444433 566766555555655678999996   4689999999


Q ss_pred             HHHHHHHHHHhcc
Q 010842          484 ELIMEGADRLFKG  496 (499)
Q Consensus       484 ~~l~~~~~~l~~~  496 (499)
                      +.|.++.++..+.
T Consensus       396 ~rl~~~l~~~~~~  408 (409)
T PLN00143        396 GRLKSFCGRHAKK  408 (409)
T ss_pred             HHHHHHHHHhccC
Confidence            9999988766554

>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase

Probab=99.86  E-value=3.8e-19  Score=180.30  Aligned_cols=335  Identities=13%  Similarity=0.109  Sum_probs=207.4

Q ss_pred             HHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc
Q 010842          107 GEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM  186 (499)
Q Consensus       107 ~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~  186 (499)
                      .+.+...+...  .+..++...++|++    +++++|.+..         ++++|||+|+..++.+..-.          
T Consensus        13 ~~~v~~~~~~~--~~~~g~~~~~le~~----la~~~g~~~~---------v~~~sgt~al~~~l~al~~~----------   67 (380)
T TIGR03588        13 IDAVVEVLKSD--FLTQGPTVPAFEEA----LAEYVGAKYA---------VAFNSATSALHIACLALGVG----------   67 (380)
T ss_pred             HHHHHHHHhcC--CccCChhHHHHHHH----HHHHHCCCeE---------EEEcCHHHHHHHHHHHcCCC----------
Confidence            33444445432  23446777778777    7788887653         77778999988887765211          


Q ss_pred             CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChh
Q 010842          187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVE  266 (499)
Q Consensus       187 ~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~  266 (499)
                      ++..|+++..+|.+...++...|+   +++.++++++ ++.+|+++|++++++..  ...+.+|+.++   .+|...|++
T Consensus        68 ~Gd~Viv~~~~~~~~~~~~~~~G~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~--~~~t~~v~~~~---~~G~~~~~~  138 (380)
T TIGR03588        68 PGDRVWTTPITFVATANCALYCGA---KVDFVDIDPD-TGNIDEDALEKKLAAAK--GKLPKAIVPVD---FAGKSVDMQ  138 (380)
T ss_pred             CCCEEEeCCcchHHHHHHHHHcCC---EEEEEecCCC-cCCcCHHHHHHHhhccc--CCCceEEEEeC---CCCccCCHH
Confidence            467899999999999999999999   9999999764 47899999999997320  01123555443   579999999


Q ss_pred             HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccc--ccccCCCcceEEEEeCchhHHHhhcCC-ccC
Q 010842          267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPH--KWLLSYLDCCCLWVKQPGLLVKALSTD-PEY  343 (499)
Q Consensus       267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~h--K~l~~p~~~g~l~~r~~~~l~~~~~~~-~~y  343 (499)
                      +|+++|++||+++++|++|+.+.....  +.. .....+|..++++|  |++.++ ..|+++++++....+..... ...
T Consensus       139 ~i~~l~~~~~~~lI~D~a~a~g~~~~~--~~~-g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g~  214 (380)
T TIGR03588       139 AIAALAKKHGLKIIEDASHALGAEYGG--KPV-GNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHGI  214 (380)
T ss_pred             HHHHHHHHcCCEEEEECCCcccCccCC--EeC-CCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCCC
Confidence            999999999999999999986643211  111 11123699999988  899766 56777777665432221100 000


Q ss_pred             CCCCCCC---CCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC----
Q 010842          344 LKNKPSE---SNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH----  416 (499)
Q Consensus       344 l~~~~~~---~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~----  416 (499)
                      .......   ......+....+....+...+.....+..  .+.+++++++..++++++.+.|+.+|+++++.++.    
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~q--L~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~  292 (380)
T TIGR03588       215 TKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQ--LKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKS  292 (380)
T ss_pred             CCCcccccccccCcceeeeeccccccCccHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEe
Confidence            0000000   00000000001111223333433333333  36688999999999999999999998877553321    


Q ss_pred             -ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEE---Eeee----E----C----------CEEEEEEeccCCCC
Q 010842          417 -FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYL---THTI----V----G----------GLYMLRFAVGASLT  474 (499)
Q Consensus       417 -~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~----~----~----------g~~~lRi~~~~~~~  474 (499)
                       ...+.+.+....       ....+++.+.|.++|+..-   .+..    +    .          ....+++.+ ++..
T Consensus       293 ~~~~~~i~~~~~~-------~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~-~~~l  364 (380)
T TIGR03588       293 AWHLYPILLDQEF-------GCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPL-HPAL  364 (380)
T ss_pred             EEEEEEEEECCcC-------CCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCC-CCCC
Confidence             122333333210       0114567777777775321   1100    0    0          014577766 6889


Q ss_pred             cHHHHHHHHHHHHHH
Q 010842          475 DERHVVAAWELIMEG  489 (499)
Q Consensus       475 t~~di~~l~~~l~~~  489 (499)
                      |++||++++++|+++
T Consensus       365 ~~~dv~~i~~~l~~~  379 (380)
T TIGR03588       365 TLEQQQRVVETLRKV  379 (380)
T ss_pred             CHHHHHHHHHHHHHh
Confidence            999999999999875

This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional

Probab=99.86  E-value=2.1e-20  Score=186.94  Aligned_cols=334  Identities=12%  Similarity=-0.016  Sum_probs=212.1

Q ss_pred             cCCCCCChHHHHHHHHHHHc-c---cCCccc---ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEc-CChHHHH
Q 010842           95 FFPATVSTAGFLGEMLCACF-N---SVGFNW---LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQ-NTTSDSI  166 (499)
Q Consensus        95 ~~~~~~~~~~~~~~~l~~~~-n---~~~~~~---~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t-~ggt~A~  166 (499)
                      +.|++...|..+-+.+...+ +   .....+   ..++...++-+++.+.+++++|.+.+.      ..+++ ++||.|+
T Consensus         7 ~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~------~v~~~~gsgt~~~   80 (360)
T PRK05355          7 FSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNY------KVLFLQGGASLQF   80 (360)
T ss_pred             ccCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------EEEEEcCCchHHH
Confidence            56777777766666655443 1   111222   234555688888999999999985431      23444 5565554


Q ss_pred             HHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC-CCCCccCHHHHHH-HHHHHHHcC
Q 010842          167 LVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV-DANFSLSPQLLRR-AVEADVEAG  244 (499)
Q Consensus       167 ~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~-~i~~~~~~g  244 (499)
                      -.+++.....        |.+..+|..+...|.+ .+.++..|.   . ..++.++ .+  ..+..++++ .|+++    
T Consensus        81 Ea~~~nl~~~--------g~~~l~i~~G~fg~r~-~~~a~~~g~---~-~~~~~~~~~g--~~~~~~~~~~~l~~~----  141 (360)
T PRK05355         81 AMVPMNLLGG--------GKKADYVDTGSWSKKA-IKEAKKYGE---V-NVAASSEDDG--FTYIPPLDEWQLSDD----  141 (360)
T ss_pred             HHHHHhcCCC--------CCeEEEEECCHHHHHH-HHHHHHhCC---c-eEEecccccC--CCCCCChhhccCCCC----
Confidence            4444433221        2123445544444444 567777787   5 5555553 33  455555555 55443    


Q ss_pred             CccEEEEEecCCCcccccC-ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcce
Q 010842          245 LVPLFLCATVGTTSTTAVD-NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCC  323 (499)
Q Consensus       245 ~~p~~vv~t~gtt~~G~id-~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g  323 (499)
                        +.+|.+++..|+||... ||.+|      +|+.++||++.+.+....+-        ...|.+++++||+++ |.|.|
T Consensus       142 --~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv--------~~~d~~~~ssqK~lg-P~Glg  204 (360)
T PRK05355        142 --AAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDV--------SKFGLIYAGAQKNIG-PAGLT  204 (360)
T ss_pred             --CCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCH--------HHccEEEEecccccc-CCceE
Confidence              34899999999999997 78877      89999999998776554331        125799999999986 99999


Q ss_pred             EEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHH
Q 010842          324 CLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFE  400 (499)
Q Consensus       324 ~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~  400 (499)
                      +++++++.. .+ +.. .+.|+.....       .......++... ....+..+++.+-.+ |++++.++..+++++++
T Consensus       205 ~l~~s~~~l-~~-~~~~~~~~~~~~~~-------~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~  275 (360)
T PRK05355        205 IVIVREDLL-GR-ALPSIPSMLDYKTH-------ADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLY  275 (360)
T ss_pred             EEEECHHHH-hh-cccCCChHHHHHHH-------HhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence            999998643 22 211 1122211100       000001112111 235677788888778 89999999999999999


Q ss_pred             HHHhcCCCeEEEcC--CCc-eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHH
Q 010842          401 GFVKSDPRFEIVVP--RHF-ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDER  477 (499)
Q Consensus       401 ~~L~~~~~~~~~~~--~~~-~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~  477 (499)
                      +.|++++.+..+.+  ... .+++|++...         ....++.+.+.++|.++ .... ...+.+|+|+. +++|++
T Consensus       276 ~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~---------~~~~~~~~~~~~~Gi~~-~~~~-~~~g~vRiS~~-~~nt~e  343 (360)
T PRK05355        276 DAIDSSDFYRNPVAPEDRSRMNVPFTLADE---------ELDKKFLAEAKAAGLVG-LKGH-RSVGGMRASIY-NAMPLE  343 (360)
T ss_pred             HHHHhCCCcccCCChhhcCCcEEEEEcCCh---------HHHHHHHHHHHHCCCcc-cCCC-CccCcEEEECC-CCCCHH
Confidence            99999974333322  233 4688876541         22356667778889765 2222 22367999995 889999


Q ss_pred             HHHHHHHHHHHHHH
Q 010842          478 HVVAAWELIMEGAD  491 (499)
Q Consensus       478 di~~l~~~l~~~~~  491 (499)
                      ||++++++|+++.+
T Consensus       344 ei~~l~~~l~~~~~  357 (360)
T PRK05355        344 GVQALVDFMKEFER  357 (360)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999999765

>PRK08912 hypothetical protein; Provisional

Probab=99.86  E-value=4.9e-19  Score=180.02  Aligned_cols=314  Identities=13%  Similarity=0.052  Sum_probs=206.1

Q ss_pred             cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCc-cEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC
Q 010842          119 FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTG-GGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT  197 (499)
Q Consensus       119 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~  197 (499)
                      ..|....+..++++.+.+|+.+.+|.+.+.     . ..++|+|+++|+..++.+..+           ++..|+++.++
T Consensus        57 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~~i~~t~G~~~al~~~~~~~~~-----------~gd~Vlv~~p~  120 (387)
T PRK08912         57 NQYPPMMGLPELRQAVAAHYARFQGLDLDP-----ETEVMVTSGATEALAAALLALVE-----------PGDEVVLFQPL  120 (387)
T ss_pred             CCCCCCCCcHHHHHHHHHHHHHHhCCCCCC-----cccEEEeCCcHHHHHHHHHHhcC-----------CCCEEEEeCCC
Confidence            456666677899999999999888864221     1 468999999988766665422           46678889999


Q ss_pred             chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHH
Q 010842          198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANE  274 (499)
Q Consensus       198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~  274 (499)
                      |..+..+++..|.   +++.+|++.+ ++.+|+++|++.+.+.+      .+|+.+.++|+||.+-+   +++|.++|++
T Consensus       121 y~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~  190 (387)
T PRK08912        121 YDAYLPLIRRAGG---VPRLVRLEPP-HWRLPRAALAAAFSPRT------KAVLLNNPLNPAGKVFPREELALLAEFCQR  190 (387)
T ss_pred             chhhHHHHHHcCC---EEEEEecCcc-cCcCCHHHHHHHhCccc------eEEEEeCCCCCcCcccCHHHHHHHHHHHHH
Confidence            9999999999999   9999998753 47899999999886543      36778899999999965   7779999999


Q ss_pred             hCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCC
Q 010842          275 YGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSES  351 (499)
Q Consensus       275 ~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~  351 (499)
                      |++++++|.+|+.+.+........  ..+....+.++.+..|.++.| .-+|+++...+ .. +.+........      
T Consensus       191 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~-~~-~~l~~~~~~~~------  262 (387)
T PRK08912        191 HDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPP-LL-RVLAKAHQFLT------  262 (387)
T ss_pred             CCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHH-HH-HHHHHHHhhcc------
Confidence            999999999997654321111111  122223467889999998854 45888887543 22 22211100000      


Q ss_pred             CCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce-EEEEEecCCC
Q 010842          352 NSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA-LVCFRLNPYP  428 (499)
Q Consensus       352 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-~v~f~~~~~~  428 (499)
                              +  ..    ......+....+  ..+.+++..++..+.++++.+.|++. ++++. ++..+ .+++.+.+..
T Consensus       263 --------~--~~----~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~l~~~l~~~~  326 (387)
T PRK08912        263 --------F--TT----PPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI-GFPVL-PSQGTYFLTVDLAPLG  326 (387)
T ss_pred             --------c--cC----ChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCcceEEEecccccC
Confidence                    0  00    011112222222  23445677777888889999999987 67765 44433 4444554311


Q ss_pred             CCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC----CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          429 HSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG----GLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       429 ~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~----g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      .      .....++.+++. +.|+.+..+..+.    +..++|++++.   +++++++.++.|.++.+
T Consensus       327 ~------~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~---~~~~l~~~l~rl~~~l~  385 (387)
T PRK08912        327 L------AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK---RDATLDEAVERLAAARR  385 (387)
T ss_pred             C------CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC---CHHHHHHHHHHHHHHHh
Confidence            0      001345666664 4576554444332    24789999973   47889999988887654

>PRK07777 aminotransferase; Validated

Probab=99.86  E-value=3e-19  Score=181.64  Aligned_cols=327  Identities=15%  Similarity=0.073  Sum_probs=212.3

Q ss_pred             HHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc
Q 010842          107 GEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM  186 (499)
Q Consensus       107 ~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~  186 (499)
                      -+.+...+......|...++..++++++.+|+.+.+|.+...    ....++|+|+++|+..++.+..+           
T Consensus        43 ~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~i~~t~G~~~al~~~~~~~~~-----------  107 (387)
T PRK07777         43 LEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDP----DTEVLVTVGATEAIAAAVLGLVE-----------  107 (387)
T ss_pred             HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCcHHHHHHHHHHhcC-----------
Confidence            333444444334557667778999999999999988875321    01358999999998777664421           


Q ss_pred             CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCC-CCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---
Q 010842          187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVD-ANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---  262 (499)
Q Consensus       187 ~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---  262 (499)
                      ++..|+++...|..+..+++..|.   .++.+|.+++ ++|.+|+++|++.+.+++      .+|+++.++|+||.+   
T Consensus       108 ~gd~vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~  178 (387)
T PRK07777        108 PGDEVLLIEPYYDSYAAVIAMAGA---HRVPVPLVPDGRGFALDLDALRAAVTPRT------RALIVNSPHNPTGTVLTA  178 (387)
T ss_pred             CCCEEEEeCCCchhhHHHHHHCCC---EEEEeecCCccCCCcCCHHHHHHhcCccc------EEEEEcCCCCCCCccCCH
Confidence            456788888899999999999999   9999998865 357899999999886543      367788899999998   


Q ss_pred             CChhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC
Q 010842          263 DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST  339 (499)
Q Consensus       263 d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~  339 (499)
                      +++++|+++|+++++++++|.+|+.+.+........  ..+....+.+..+++|.++.| ..+|+++..++  +.+.+..
T Consensus       179 ~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~--l~~~~~~  256 (387)
T PRK07777        179 AELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAP--LIAAVRA  256 (387)
T ss_pred             HHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHH--HHHHHHH
Confidence            458899999999999999999997654321111111  122233567889999999865 44788776542  2222221


Q ss_pred             CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHH--hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCc
Q 010842          340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRS--YGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHF  417 (499)
Q Consensus       340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~--~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~  417 (499)
                      ...+....                .    ......++...  .+...+++..++..++++++.+.|++. ++++..+...
T Consensus       257 ~~~~~~~~----------------~----~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~g~  315 (387)
T PRK07777        257 AKQYLTYV----------------G----GAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEA-GFEVHDSAGT  315 (387)
T ss_pred             HHhhcccC----------------C----CCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC-CCCccCCCcc
Confidence            11111100                0    11111111111  234556677778888899999999886 6776533333


Q ss_pred             eEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC-----CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG-----GLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~-----g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      ..+++++.+..       .....++.+.|.+ .|..+..+..+.     +..++|++++   .+++++++.++.|.++.
T Consensus       316 ~~~~~~~~~~~-------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~---~~~~~l~~~l~~l~~~~  384 (387)
T PRK07777        316 YFLCADPRPLG-------YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFC---KRDDTLDEAIRRLRALR  384 (387)
T ss_pred             eEEEecccccC-------CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEec---CCHHHHHHHHHHHHHHh
Confidence            33444543211       0013567777754 565544433332     2458999996   36889999999988764

>PRK08363 alanine aminotransferase; Validated

Probab=99.86  E-value=4.4e-19  Score=181.00  Aligned_cols=334  Identities=10%  Similarity=0.053  Sum_probs=213.2

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ..+.+.+...+......|...++..++++.+.+|+.+..|..-+.     ...++|+|+++|+..++.+..+        
T Consensus        49 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~it~G~~~al~~~~~~~~~--------  115 (398)
T PRK08363         49 EHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITP-----DDVRVTAAVTEALQLIFGALLD--------  115 (398)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCh-----hhEEEeCCHHHHHHHHHHHhCC--------
Confidence            344455554443222345556778899999999988877753211     1468999999998877765532        


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEe-eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRAL-PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v-~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                         ++..|+++..+|..+...++..|.   .++.+ +.+++ ++.+|+++|++.+.+++      .+|+++.++|+||.+
T Consensus       116 ---~gd~Vl~~~p~y~~~~~~~~~~g~---~~v~~~~~~~~-~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~~  182 (398)
T PRK08363        116 ---PGDEILIPGPSYPPYTGLVKFYGG---VPVEYRTIEEE-GWQPDIDDIRKKITEKT------KAIAVINPNNPTGAL  182 (398)
T ss_pred             ---CCCEEEEcCCCCcchHHHHHHcCC---EEEEecccccc-CCcCCHHHHHhhCCcce------EEEEEECCCCCCCcC
Confidence               567799999999999999999998   88887 55544 47899999999886543      367788999999998


Q ss_pred             CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCC-c-eeEeccccccc-CCCcceEEEEeCchhHHHh
Q 010842          263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERV-D-SFSFSPHKWLL-SYLDCCCLWVKQPGLLVKA  336 (499)
Q Consensus       263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~a-D-si~~~~hK~l~-~p~~~g~l~~r~~~~l~~~  336 (499)
                      -+   +++|+++|+++|+++++|++|+.+.+. +.... ...+... . .+..+..|+++ ....+|++++.++..+...
T Consensus       183 ~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~-~~~~~-~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~  260 (398)
T PRK08363        183 YEKKTLKEILDIAGEHDLPVISDEIYDLMTYE-GKHVS-PGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLAE  260 (398)
T ss_pred             cCHHHHHHHHHHHHHcCeEEEEhhhhhhhccC-CcccC-HHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHHH
Confidence            66   899999999999999999999865332 11111 1111112 2 34568999954 4477899988332211111


Q ss_pred             hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842          337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP  414 (499)
Q Consensus       337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~  414 (499)
                      +......+...             ..    ....+...++...+  ..+.+++..++..+.++++.+.|+++|++++. +
T Consensus       261 l~~~~~~~~~~-------------~~----~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~-~  322 (398)
T PRK08363        261 VREAIDKLARI-------------RL----CPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTT-K  322 (398)
T ss_pred             HHHHHHHHhcc-------------cc----cCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEec-C
Confidence            11000000000             00    01122233333333  24667777788888889999999988888754 5


Q ss_pred             CCceEEEE-EecCCCCCCcchhHHHHHHHH-HHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          415 RHFALVCF-RLNPYPHSGSADTEMLNRKLL-DWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       415 ~~~~~v~f-~~~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      |..+.+.| ++.+..   .    ....+++ +.+.++|+.+..+..+.  +..++|++++   .+++++++.++.|+++.
T Consensus       323 p~g~~~~~~~l~~~~---~----~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~---~~~~~l~~~l~~l~~~~  392 (398)
T PRK08363        323 PQGAFYIFPRIEEGP---W----KDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFL---PPVEILEEAMDRFEEFM  392 (398)
T ss_pred             CCeEEEEEEEeccCC---C----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec---CCHHHHHHHHHHHHHHH
Confidence            55566555 444310   0    0022333 44566776555444443  2468999995   46889999999998877


Q ss_pred             HHH
Q 010842          491 DRL  493 (499)
Q Consensus       491 ~~l  493 (499)
                      ++.
T Consensus       393 ~~~  395 (398)
T PRK08363        393 RER  395 (398)
T ss_pred             HHh
Confidence            653

>PRK06107 aspartate aminotransferase; Provisional

Probab=99.86  E-value=3.3e-19  Score=182.02  Aligned_cols=339  Identities=12%  Similarity=0.052  Sum_probs=214.9

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ..+.+.+...+......|....+..++.+++.+++.+.+|.+...     ...++|+|+++|+..++.+..+        
T Consensus        49 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~~~~--------  115 (402)
T PRK06107         49 DHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYAD-----NEITVGGGAKQAIFLALMATLE--------  115 (402)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEeCCHHHHHHHHHHHhcC--------
Confidence            335566666554333456666677899999999999998874321     2468999999998877764321        


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD  263 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id  263 (499)
                         ++..|+++.+.+..+..++...|.   .++.++++.+++|.+|+++|++.+.+.      +.+|+.+.++|+||.+-
T Consensus       116 ---~gd~vl~~~p~y~~y~~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~  183 (402)
T PRK06107        116 ---AGDEVIIPAPYWVSYPDMVLANDG---TPVIVACPEEQGFKLTPEALEAAITPR------TRWLILNAPSNPTGAVY  183 (402)
T ss_pred             ---CCCEEEEecCCCcCHHHHHHHcCC---EEEEecCCcccCCCCCHHHHHhhcCcC------ceEEEEECCCCCCCcCc
Confidence               567788898888888888888887   788888865445789999999988543      33678888999999885


Q ss_pred             ---ChhHHHHHHHHh-CCEEEeeccccchhccCccchhhh---cCCCCCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842          264 ---NVEPLAEVANEY-GIWVHVDAAYAGSACICPEFRHYL---NGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK  335 (499)
Q Consensus       264 ---~l~~I~~ia~~~-~~~lhvD~A~g~~~~~~~~~~~~~---~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~  335 (499)
                         .+++|+++|+++ ++++++|.+|+...+-.+......   .+...--.+..+.+|.++.| .-+|+++... ... +
T Consensus       184 s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~-~~~-~  261 (402)
T PRK06107        184 SRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPA-DLI-A  261 (402)
T ss_pred             CHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCH-HHH-H
Confidence               467778889998 999999999975433211111111   12111234456679999755 4578877543 222 2


Q ss_pred             hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                      .+.....+..                    .....+..+++...+  +...+++..+...+.++.+.+.|++++++.+. 
T Consensus       262 ~~~~~~~~~~--------------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~-  320 (402)
T PRK06107        262 AINKLQSQSS--------------------SCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLSCL-  320 (402)
T ss_pred             HHHHHHHhcc--------------------cCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCccc-
Confidence            2222111110                    011233444444444  34556677777788888899999888787765 


Q ss_pred             CCCceEEE-EEecCC-CCCCcchh-HHHHHHHHHHH-HhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          414 PRHFALVC-FRLNPY-PHSGSADT-EMLNRKLLDWV-NSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       414 ~~~~~~v~-f~~~~~-~~~~~~~~-~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      +|..+.+. +++... +....+.. ......+.+.+ .+.|+.+..+..++...++|++++   .+++++++.++.|.++
T Consensus       321 ~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~---~~~e~l~~~l~~l~~~  397 (402)
T PRK06107        321 VPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIA---TSLETLEEACARIERA  397 (402)
T ss_pred             CCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC---CCHHHHHHHHHHHHHH
Confidence            44444443 343210 00000000 00123455554 456766555555544578999997   3689999999999988


Q ss_pred             HHHH
Q 010842          490 ADRL  493 (499)
Q Consensus       490 ~~~l  493 (499)
                      .+++
T Consensus       398 l~~~  401 (402)
T PRK06107        398 VAAL  401 (402)
T ss_pred             HHhc
Confidence            7654

>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]

Probab=99.86  E-value=6.4e-19  Score=158.82  Aligned_cols=300  Identities=15%  Similarity=0.122  Sum_probs=215.5

Q ss_pred             HHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEE
Q 010842          138 LATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRA  217 (499)
Q Consensus       138 la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~  217 (499)
                      +++.+|++..         =+|.|+-+|-+..|.+...           ++..|++...+||+..-|+...|+   +|..
T Consensus        70 laeFlg~D~~---------R~t~GARe~KfavMhal~~-----------~gd~vV~D~~aHYttyvAAEragl---~v~e  126 (382)
T COG1103          70 LAEFLGMDEV---------RVTAGAREAKFAVMHALCK-----------EGDWVVVDSLAHYTTYVAAERAGL---NVAE  126 (382)
T ss_pred             HHHHhCCcee---------eecccchhhHHHHHHHhcc-----------CCCEEEEcCcchHHHHHHHHhcCC---eEEe
Confidence            9999999875         7899999998877776543           577888899999999999999999   9999


Q ss_pred             eeCCCCCCCccCHHHHHHHHHHHHHcC-CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccch
Q 010842          218 LPTSVDANFSLSPQLLRRAVEADVEAG-LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFR  296 (499)
Q Consensus       218 v~~~~~~~~~~d~~~L~~~i~~~~~~g-~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~  296 (499)
                      ||....-.|.++++...+.|++-++++ ..|.+.+.|++....|.+.|.+.++++|+++|+++.+.+||..+-+.... +
T Consensus       127 Vp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~-k  205 (382)
T COG1103         127 VPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSG-K  205 (382)
T ss_pred             cCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccc-c
Confidence            997655569999999999999987765 77999999999999999999999999999999999999999877543211 1


Q ss_pred             hhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcH-HHHH
Q 010842          297 HYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSL-RLWM  375 (499)
Q Consensus       297 ~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al-~~~~  375 (499)
                           --++|+|+.|+||.+.+...||++.++.+-. ...+..+..+.....-          --+.|+-|...+ .+.+
T Consensus       206 -----e~g~DFiVgSGHKsmAAs~PiGvl~~~eE~a-e~V~r~Sg~~~~~KEv----------ellGCT~rGapivTlmA  269 (382)
T COG1103         206 -----EIGADFIVGSGHKSMAASAPIGVLAMSEEWA-EIVLRRSGRAFPKKEV----------ELLGCTVRGAPIVTLMA  269 (382)
T ss_pred             -----ccCCCEEEecCccchhccCCeeEEeehhHHH-HHHHhhccccccccee----------eeecccccCchHHHHHh
Confidence                 1249999999999999888899999987532 2333333222222110          124566444433 2222


Q ss_pred             HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCce-EEEEEecCCCCCCcchhHHHHHH-------HHHHH
Q 010842          376 VLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFA-LVCFRLNPYPHSGSADTEMLNRK-------LLDWV  446 (499)
Q Consensus       376 ~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~-~v~f~~~~~~~~~~~~~~~~~~~-------l~~~l  446 (499)
                      ++-. -.+.. ++++.-.+.+++|.+.|+++.|+..+.. |... .+.|..+.        .+++.+.       |.+.|
T Consensus       270 SfP~-V~eRV-krWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~--------f~eIakk~~r~gyFlY~EL  339 (382)
T COG1103         270 SFPH-VVERV-KRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPV--------FHEIAKKHKRKGYFLYEEL  339 (382)
T ss_pred             cCHH-HHHHH-HHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCch--------HHHHHHhCcCCceeeHHHH
Confidence            2222 12332 3445567789999999999988887753 4333 33343322        1222222       45566


Q ss_pred             HhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          447 NSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       447 ~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      .++|+.-+.+   +-..++.+++  +..+.|+++..++++++++++
T Consensus       340 K~RgI~GI~~---G~Tk~~K~sv--yGl~~Eqve~V~~afkeI~ek  380 (382)
T COG1103         340 KKRGIHGIQP---GQTKYFKLSV--YGLSWEQVEYVVDAFKEIAEK  380 (382)
T ss_pred             HhcCcccccc---CceeEEEEEe--ecCCHHHHHHHHHHHHHHHHh
Confidence            6666433332   2235688887  668999999999999999875

>PRK05958 8-amino-7-oxononanoate synthase; Reviewed

Probab=99.86  E-value=5.1e-19  Score=179.92  Aligned_cols=295  Identities=13%  Similarity=0.059  Sum_probs=191.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      ..+..++.+++++++|.+.         .+++++|+++++.++.+..+           ++..|+++...|.+...++..
T Consensus        83 ~~~~~~l~~~la~~~~~~~---------~i~~~~g~~~~~~~l~~~~~-----------~gd~V~~~~~~~~~~~~~~~~  142 (385)
T PRK05958         83 SPAHEALEEELAEWFGAER---------ALLFSSGYAANLAVLTALAG-----------KGDLIVSDKLNHASLIDGARL  142 (385)
T ss_pred             cHHHHHHHHHHHHHhCCCc---------EEEECcHHHHHHHHHHHhCC-----------CCCEEEEeCccCHHHHHHHHh
Confidence            4455666777899888543         37788889888776654321           566788899999999999999


Q ss_pred             hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842          208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG  287 (499)
Q Consensus       208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~  287 (499)
                      .|.   .++.+|.       .|++++++.+++..   ..+.+++.....|++|.+.|+++|+++|++||+|+++|++|+.
T Consensus       143 ~g~---~~~~~~~-------~d~~~l~~~i~~~~---~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~  209 (385)
T PRK05958        143 SRA---RVRRYPH-------NDVDALEALLAKWR---AGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGT  209 (385)
T ss_pred             cCC---ceEEeCC-------CCHHHHHHHHHhcc---CCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccc
Confidence            998   8888764       38899999886521   1234566667788999999999999999999999999999965


Q ss_pred             hhccC-ccchhhhcCCC-CCc-eeEecccccccCCCcceEEEEeCchhHHHhhc-CCccCCCCCCCCCCCcccCCCcccC
Q 010842          288 SACIC-PEFRHYLNGIE-RVD-SFSFSPHKWLLSYLDCCCLWVKQPGLLVKALS-TDPEYLKNKPSESNSVVDFKDWQVG  363 (499)
Q Consensus       288 ~~~~~-~~~~~~~~g~~-~aD-si~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~  363 (499)
                      +.+.. ........++. ..| .+..+.||+++.+ | |+++.+ +... +.+. ....|....                
T Consensus       210 g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G-g~~~~~-~~~~-~~~~~~~~~~~~~~----------------  269 (385)
T PRK05958        210 GVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSS-G-AAVLGS-ETLI-DYLINRARPFIFTT----------------  269 (385)
T ss_pred             cccCCCCCchHHhhCCCCCCceEEEEechhhcccC-C-cEEEcC-HHHH-HHHHHhCccceecC----------------
Confidence            43221 10000011221 233 6678899999753 3 665443 3322 2221 111121110                


Q ss_pred             CCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHH
Q 010842          364 TGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLL  443 (499)
Q Consensus       364 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~  443 (499)
                      .+.......++.+++.+..  ..++.++..++++++.+.|++. ++++. ++..++++|.+..         .....++.
T Consensus       270 ~~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~---------~~~~~~~~  336 (385)
T PRK05958        270 ALPPAQAAAARAALRILRR--EPERRERLAALIARLRAGLRAL-GFQLM-DSQSAIQPLIVGD---------NERALALA  336 (385)
T ss_pred             CCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC---------HHHHHHHH
Confidence            0001112233444544321  1567788889999999999886 56654 4566777777642         12356788


Q ss_pred             HHHHhcCCEEEEeee---ECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          444 DWVNSTGRVYLTHTI---VGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       444 ~~l~~~g~~~~~~~~---~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      ++|.++|+.+.....   ..+..++|+++. ..++++|++++++.|+++
T Consensus       337 ~~l~~~gI~v~~~~~~~~~~~~~~lRis~~-~~~~~~~i~~~l~~l~~~  384 (385)
T PRK05958        337 AALQEQGFWVGAIRPPTVPAGTSRLRITLT-AAHTEADIDRLLEALAEA  384 (385)
T ss_pred             HHHHHCCceEecccCCCCCCCCceEEEEec-CCCCHHHHHHHHHHHHhc
Confidence            888888865532111   124568999994 778999999999999765

>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []

Probab=99.85  E-value=9e-21  Score=188.25  Aligned_cols=229  Identities=21%  Similarity=0.192  Sum_probs=160.9

Q ss_pred             HHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCC
Q 010842          135 MDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPAN  214 (499)
Q Consensus       135 ~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~  214 (499)
                      .+.+++.||.+.++        ++++|+|.+|..++.++..           ++..|++++++|.|+..++.+.|+   .
T Consensus        72 e~~aA~~fGAd~t~--------flvnGsT~g~~a~i~a~~~-----------~gd~VLv~RN~HkSv~~alil~ga---~  129 (417)
T PF01276_consen   72 EELAARAFGADKTF--------FLVNGSTSGNQAMIMALCR-----------PGDKVLVDRNCHKSVYNALILSGA---I  129 (417)
T ss_dssp             HHHHHHHHTESEEE--------EESSHHHHHHHHHHHHHTT-----------TTCEEEEETT--HHHHHHHHHHTE---E
T ss_pred             HHHHHHhcCCCeEE--------EEecCchHHHHHHHHHhcC-----------CCCEEEEcCCcHHHHHHHHHHcCC---e
Confidence            35699999999987        8889999999988888754           678899999999999999999999   9


Q ss_pred             eEEeeCCCCCC---CccCH-----HHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842          215 IRALPTSVDAN---FSLSP-----QLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA  286 (499)
Q Consensus       215 v~~v~~~~~~~---~~~d~-----~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g  286 (499)
                      +++++...+..   ..+++     +.++++|++..... .|.+|++|.+|. .|.+-|+++|+++|+++++.|+||+|||
T Consensus       130 Pvyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k-~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhG  207 (417)
T PF01276_consen  130 PVYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAK-APRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHG  207 (417)
T ss_dssp             EEEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCH-CESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-
T ss_pred             EEEecCCccccCCccCCChhhhhHHHHHHHHHhCcccc-CceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEcccc
Confidence            99987752211   24566     99999998754322 155688888765 8999999999999999999999999999


Q ss_pred             chhccCccchhhhcCCCCCc-------eeEecccccccCCCcceEEEEeCch-----hHHHhh----cCCccCCCCCCCC
Q 010842          287 GSACICPEFRHYLNGIERVD-------SFSFSPHKWLLSYLDCCCLWVKQPG-----LLVKAL----STDPEYLKNKPSE  350 (499)
Q Consensus       287 ~~~~~~~~~~~~~~g~~~aD-------si~~~~hK~l~~p~~~g~l~~r~~~-----~l~~~~----~~~~~yl~~~~~~  350 (499)
                      +.+.+.+-.+....  -+||       .++.|.||.+..-.+++++++++..     .+.+++    +..|+|+.-    
T Consensus       208 ah~~F~~lp~~a~~--~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lm----  281 (417)
T PF01276_consen  208 AHFGFHPLPRSALA--LGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLM----  281 (417)
T ss_dssp             TTGGCSGGGTTCSS--TTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHH----
T ss_pred             ccccCCCCccchhh--ccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHH----
Confidence            98777643333221  2488       9999999999999999999999874     122222    233333211    


Q ss_pred             CCCcccCCCcccCCCCCCCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHH---hcCCCeEEEcC
Q 010842          351 SNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFV---KSDPRFEIVVP  414 (499)
Q Consensus       351 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L---~~~~~~~~~~~  414 (499)
                                          ..+-.+.+.+ +.+| ++++++..++++.+++.|   .+++.|+++.+
T Consensus       282 --------------------ASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~  328 (417)
T PF01276_consen  282 --------------------ASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGP  328 (417)
T ss_dssp             --------------------HHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-
T ss_pred             --------------------HHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCc
Confidence                                2333444445 3344 567777888888888888   67788888754

One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.

>PRK13392 5-aminolevulinate synthase; Provisional

Probab=99.85  E-value=5.8e-19  Score=180.83  Aligned_cols=296  Identities=13%  Similarity=0.092  Sum_probs=190.9

Q ss_pred             HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCC
Q 010842          133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSP  212 (499)
Q Consensus       133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~  212 (499)
                      ++.+.+++++|.+..         +++++|++||..++......         .++.+|+++...|.++..+++..|.  
T Consensus        95 ~Le~~la~~~g~~~~---------i~~~sG~~a~~~~i~~l~~~---------~~g~~vi~~~~~h~s~~~~~~~~g~--  154 (410)
T PRK13392         95 LLERELADLHGKESA---------LLFTSGYVSNDAALSTLGKL---------LPGCVILSDALNHASMIEGIRRSGA--  154 (410)
T ss_pred             HHHHHHHHHhCCCCE---------EEECcHHHHHHHHHHHHhcC---------CCCCEEEEehhhhHHHHHHHHHcCC--
Confidence            344458999997543         77778899988887744211         0345788888899999888888888  


Q ss_pred             CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccC
Q 010842          213 ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACIC  292 (499)
Q Consensus       213 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~  292 (499)
                       +++.++.+       |.+++++.++...  ...+.+|+++.++|++|.+-|+++|.++|+++|+++++|+||+.+.+ .
T Consensus       155 -~~~~~~~~-------d~~~l~~~l~~~~--~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~-g  223 (410)
T PRK13392        155 -EKQVFRHN-------DLADLEEQLASVD--PDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLY-G  223 (410)
T ss_pred             -eEEEEeCC-------CHHHHHHHHHhcc--CCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCc-C
Confidence             77776532       5667777775432  12355889999999999999999999999999999999999984432 1


Q ss_pred             ccchhh--hcC-CCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC
Q 010842          293 PEFRHY--LNG-IERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK  369 (499)
Q Consensus       293 ~~~~~~--~~g-~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~  369 (499)
                      +.....  ..+ .++.|.++.+.+|+++.+.  |++.. +++..........+|.....                ..+..
T Consensus       224 ~~g~g~~~~~~~~~~~div~~tlsK~~g~~G--G~~~~-~~~~~~~l~~~~~~~~~s~~----------------~~~~~  284 (410)
T PRK13392        224 ARGGGIAERDGLMDRIDMIQGTLAKAFGCLG--GYIAA-SADLIDFVRSFAPGFIFTTA----------------LPPAV  284 (410)
T ss_pred             CCCCchhhhccCCCCCcEEEEEChHhhhccc--chhhc-CHHHHHHHHHhCcchhccCc----------------CCHHH
Confidence            211111  112 2357888889999998753  55544 33332211122222221110                00011


Q ss_pred             cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-h
Q 010842          370 SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-S  448 (499)
Q Consensus       370 al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~  448 (499)
                      +..+..+++.+  +...+..++..++++++.+.|++. ++++. ++..+++.+.+..         .....++.++|. +
T Consensus       285 ~~a~~aaL~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~---------~~~~~~~~~~L~~~  351 (410)
T PRK13392        285 AAGATAAIRHL--KTSQTERDAHQDRVAALKAKLNAN-GIPVM-PSPSHIVPVMVGD---------PTLCKAISDRLMSE  351 (410)
T ss_pred             HHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC---------HHHHHHHHHHHHHh
Confidence            22333444433  222344567788889999999887 77765 4555666554432         123467788886 4


Q ss_pred             cCCEEEEeee----ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          449 TGRVYLTHTI----VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       449 ~g~~~~~~~~----~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +|+. +.+..    ..+..++|+++ +...|++|+++++++|.++.+++
T Consensus       352 ~GI~-v~~~~~p~~~~~~~~lRis~-~~~~t~edid~l~~aL~~~~~~~  398 (410)
T PRK13392        352 HGIY-IQPINYPTVPRGTERLRITP-TPLHDDEDIDALVAALVAIWDRL  398 (410)
T ss_pred             CCEE-EeeeCCCCCCCCCceEEEEE-CCCCCHHHHHHHHHHHHHHHHHc
Confidence            5754 33321    23557899999 47889999999999999987654

>PRK09082 methionine aminotransferase; Validated

Probab=99.85  E-value=3.2e-19  Score=181.25  Aligned_cols=325  Identities=11%  Similarity=0.076  Sum_probs=212.3

Q ss_pred             HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842          105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE  184 (499)
Q Consensus       105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~  184 (499)
                      .+.+.+...+......|....+...+++++.+++.+++|.+...    ....++|+|+++|+..++.+..+         
T Consensus        47 ~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~----~~~i~~t~G~~~al~~~~~~~~~---------  113 (386)
T PRK09082         47 YLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDA----DSEITVTAGATEALFAAILALVR---------  113 (386)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCHHHHHHHHHHHHcC---------
Confidence            34455555554334456666778899999999999999875320    01368899999998887765532         


Q ss_pred             ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc--
Q 010842          185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV--  262 (499)
Q Consensus       185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i--  262 (499)
                        ++..|+++..+|.++..+++..|.   +++.+|++.+ ++.+|++++++.+.+++      .+|+++.++|+||.+  
T Consensus       114 --~gd~Vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~  181 (386)
T PRK09082        114 --PGDEVIVFDPSYDSYAPAIELAGG---RAVRVALQPP-DFRVDWQRFAAAISPRT------RLIILNTPHNPSGTVWS  181 (386)
T ss_pred             --CCCEEEEeCCCchhhHHHHHHcCC---EEEEEecCcc-cccCCHHHHHHhcCccc------eEEEEeCCCCCCCcCCC
Confidence              567788999999999999999999   9999999754 48999999999986543      367788899999987  


Q ss_pred             -CChhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhc
Q 010842          263 -DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALS  338 (499)
Q Consensus       263 -d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~  338 (499)
                       +++++|.++|++||+++++|.+|+.+.+........  ..+...-..+..+..|.++.| .-+|+++..+ +.+ +.+.
T Consensus       182 ~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~-~l~-~~~~  259 (386)
T PRK09082        182 AADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPA-ALS-AEFR  259 (386)
T ss_pred             HHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCH-HHH-HHHH
Confidence             788999999999999999999997654321111111  122222346677889998755 4578887643 322 2222


Q ss_pred             CCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC
Q 010842          339 TDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH  416 (499)
Q Consensus       339 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~  416 (499)
                      ....+...                    ....+..+++...+  ..+.+++..+...++++++.+.|++. ++++. ++.
T Consensus       260 ~~~~~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~~~  317 (386)
T PRK09082        260 KVHQYNTF--------------------TVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS-RFKLL-PCE  317 (386)
T ss_pred             HHHhhhcC--------------------CCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCC
Confidence            21111000                    01122222222222  34556666777778888899999875 67754 455


Q ss_pred             ceE-EEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC----CEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          417 FAL-VCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG----GLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       417 ~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~----g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      .+. +++++....       +....++.+.|. +.|..+..+..+.    +..++|++++   .+++++++.+++|++
T Consensus       318 g~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~---~~~~~l~~~~~rl~~  385 (386)
T PRK09082        318 GTYFQLVDYSAIS-------DLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFA---KQEETLDAAAERLCQ  385 (386)
T ss_pred             eeEEEEEeccccC-------CCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEec---CCHHHHHHHHHHHhh
Confidence            454 444553210       001345666654 4465444333342    2468999996   268889999988865

>TIGR03537 DapC succinyldiaminopimelate transaminase

Probab=99.85  E-value=9.6e-19  Score=175.39  Aligned_cols=322  Identities=11%  Similarity=0.040  Sum_probs=206.0

Q ss_pred             HHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCc-cEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842          106 LGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTG-GGVIQNTTSDSILVTLIAARDRALDAVGAE  184 (499)
Q Consensus       106 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~A~~~al~~ar~~~~~~~~~~  184 (499)
                      +.+.+..... ....|....+...+++++.+|+.+..|.+-+.     . ..++|+|+++|+..++.+..+.        
T Consensus        18 ~~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~~Iiit~Gs~~ai~~~~~~~~~~--------   83 (350)
T TIGR03537        18 IRKALIDAVP-EVSQYPSALGTKALREAISGWFERRFGVKLDP-----DAQVLPSAGSKEAIFHFPLVFIDP--------   83 (350)
T ss_pred             HHHHHHHHHh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCcEEEcCChHHHHHHHHHHHcCC--------
Confidence            4444444332 23456555667899999999999888864321     1 4688999999887776655321        


Q ss_pred             ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842          185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN  264 (499)
Q Consensus       185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~  264 (499)
                      |.++..|+++.++|..+..+++.+|+   +++.||++.+++|.+|++++++++.++++      +|+++.++||||.+-+
T Consensus        84 g~~~d~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~~------~i~i~~p~NPtG~~~~  154 (350)
T TIGR03537        84 EEDRRRVIFGTPGYPVYERGALFAGG---EPTAVKLKKEDGFLLRLEKVEKSILEETK------IVWINYPHNPTGATAP  154 (350)
T ss_pred             CCCCceEEEcCCCCcchHHHHHhcCC---EEEEcccCcccCCccCHHHHHHhhhhccE------EEEEeCCCCCcCcccC
Confidence            11235788899999999999999999   99999997544588999999999876543      6778889999999977


Q ss_pred             ---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhc-CCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC
Q 010842          265 ---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN-GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST  339 (499)
Q Consensus       265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~-g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~  339 (499)
                         +++|+++|+++|+++++|++|+...... ....... +.+ -..+..+.+|.++.| .-.|+++. ++... ..+..
T Consensus       155 ~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~-~~i~~~s~SK~~g~~GlRiG~~~~-~~~~~-~~~~~  230 (350)
T TIGR03537       155 RSYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALEVGIE-NVLAFHSLSKRSGMTGYRSGFVAG-DEKLI-SFLRK  230 (350)
T ss_pred             HHHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhhcCcC-CEEEEeecccccCCccccceeeec-CHHHH-HHHHH
Confidence               8899999999999999999997643211 1111111 111 124555889998655 34677654 33322 22221


Q ss_pred             CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce
Q 010842          340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA  418 (499)
Q Consensus       340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~  418 (499)
                      ...+..                  .+.  ..+...++...+ ..+.+++..++..++.+.+.+.|++. ++++. +|..+
T Consensus       231 ~~~~~~------------------~~~--~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~-~~~g~  288 (350)
T TIGR03537       231 LRANFG------------------VAS--PDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV-GLEYL-YPDAT  288 (350)
T ss_pred             HHHhhc------------------cCC--CHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCeE
Confidence            111110                  000  011112222222 23445666677777888888888886 77655 44444


Q ss_pred             E-EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          419 L-VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       419 ~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      . +.+.+.+..         ...++.+.|.++|+.+..+..+.  +..++|++++   .+++++++.++.|++
T Consensus       289 ~~~~~~~~~~~---------~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~---~~~~~~~~~l~~~~~  349 (350)
T TIGR03537       289 FYLWVKVPSGI---------DAKDYALRLLENGIVVAPGENFGSGEEGYVRVALV---PTLEECEEALRLWER  349 (350)
T ss_pred             EEEEEECCCCC---------CHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHhc
Confidence            3 444443310         13567788888886554444342  2468999985   467889999888765

Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.

>PRK06225 aspartate aminotransferase; Provisional

Probab=99.85  E-value=4.4e-19  Score=179.94  Aligned_cols=324  Identities=12%  Similarity=0.121  Sum_probs=201.8

Q ss_pred             HHHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          103 AGFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      +..+.+.+...++.. ...|....+..+++    +++++++|.+.+       ..++|+|+|+|+..++.+...      
T Consensus        43 ~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr----~~ia~~l~~~~~-------~v~~~~g~t~al~~~~~~~~~------  105 (380)
T PRK06225         43 HEEVREAMIRCIEEGEYCKYPPPEGFPELR----ELILKDLGLDDD-------EALITAGATESLYLVMRAFLS------  105 (380)
T ss_pred             CHHHHHHHHHHHhcCCCCCCCCCcchHHHH----HHHHHhcCCCCC-------cEEEeCCHHHHHHHHHHHhcC------
Confidence            334455555555432 12332222334444    558888888654       469999999998888776532      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC-CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV-DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT  260 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G  260 (499)
                           ++..|++++.+|..+..++...|.   .++.+|++. .++|.+|+++|++.+.++++      +|+++.++|+||
T Consensus       106 -----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~------~v~l~~p~NptG  171 (380)
T PRK06225        106 -----PGDNAVTPDPGYLIIDNFASRFGA---EVIEVPIYSEECNYKLTPELVKENMDENTR------LIYLIDPLNPLG  171 (380)
T ss_pred             -----CCCEEEEcCCCCcchHHHHHHhCc---eEEeeccccccCCccCCHHHHHhhcCCCce------EEEEeCCCCCCC
Confidence                 455688888888888889999999   999999753 33478999999998865443      677788999999


Q ss_pred             cc---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842          261 AV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA  336 (499)
Q Consensus       261 ~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~  336 (499)
                      .+   +++++|+++|+++|+++++|++|+.+....+.... .  ......+..++.|+++.| ..+|+++.++. .. +.
T Consensus       172 ~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~--~~~~~i~~~s~SK~~g~~G~RiG~i~~~~~-l~-~~  246 (380)
T PRK06225        172 SSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAE-Y--APEHTVTSYSFSKIFGMAGLRIGAVVATPD-LI-EV  246 (380)
T ss_pred             cCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhh-c--CCCCEEEEeechhhcCCccceeEEEecCHH-HH-HH
Confidence            97   45999999999999999999999754321111000 0  112345566778999744 34788887543 22 22


Q ss_pred             hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-c
Q 010842          337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-V  413 (499)
Q Consensus       337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~  413 (499)
                      +...   ....            +      ....+...++...+  ..+.+++..+...++.+.+.+.|++++++.+. .
T Consensus       247 ~~~~---~~~~------------~------~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~  305 (380)
T PRK06225        247 VKSI---VIND------------L------GTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVY  305 (380)
T ss_pred             HHHH---Hhcc------------c------CCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCccccC
Confidence            2110   0000            0      00122222222222  12333444444556677788888887775432 2


Q ss_pred             CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE---CCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV---GGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      ++..+.+.+.+.+..        ....++.++|.++|+.+..+..+   .+..++|+++.   .++++++++++.|+++.
T Consensus       306 ~~~g~~~~~~~~~~~--------~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~---~~~e~l~~~~~~l~~~~  374 (380)
T PRK06225        306 PSHGNMMVIDISEAG--------IDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFS---IPREQVEVFCEEFPDVV  374 (380)
T ss_pred             CCCCeEEEEEccccc--------CCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeC---CCHHHHHHHHHHHHHHH
Confidence            445556655554321        01356777777778544332211   23468999985   37899999999999988


Q ss_pred             HHHh
Q 010842          491 DRLF  494 (499)
Q Consensus       491 ~~l~  494 (499)
                      +++.
T Consensus       375 ~~~~  378 (380)
T PRK06225        375 ETLR  378 (380)
T ss_pred             HHhh
Confidence            7654

>TIGR01141 hisC histidinol-phosphate aminotransferase

Probab=99.85  E-value=4.8e-19  Score=177.41  Aligned_cols=283  Identities=14%  Similarity=0.076  Sum_probs=191.3

Q ss_pred             HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC
Q 010842          134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA  213 (499)
Q Consensus       134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~  213 (499)
                      +++.+++++|.+.+       ..++|+|+|+++..++.+..+           ++..|+++..+|..+...++..|+   
T Consensus        59 lr~~ia~~~~~~~~-------~i~~~~G~~~~l~~~~~~l~~-----------~gd~v~~~~p~y~~~~~~~~~~g~---  117 (346)
T TIGR01141        59 LKQALADYYGVDPE-------QILLGNGSDEIIELLIRAFLE-----------PGDAVLVPPPTYSMYEISAKIHGA---  117 (346)
T ss_pred             HHHHHHHHhCcChH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCHHHHHHHHHHcCC---
Confidence            44448888887543       358899999887666655422           456788888888878888899999   


Q ss_pred             CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh--CCEEEeeccccchhcc
Q 010842          214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY--GIWVHVDAAYAGSACI  291 (499)
Q Consensus       214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~--~~~lhvD~A~g~~~~~  291 (499)
                      +++.+|++++  +.+|+++|++.+.+++      .+|+.+.++|+||.+-|++++.++|+.+  ++++++|++|+.+...
T Consensus       118 ~~~~~~~~~~--~~~d~~~l~~~~~~~~------~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~  189 (346)
T TIGR01141       118 EVVKVPLDED--GQLDLEDILVAIDDKP------KLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGE  189 (346)
T ss_pred             eEEEeccCCC--CCCCHHHHHHhcCCCC------CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCC
Confidence            9999998764  5899999999764433      3788889999999999999999999887  9999999999754321


Q ss_pred             CccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCc
Q 010842          292 CPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKS  370 (499)
Q Consensus       292 ~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a  370 (499)
                       +.......... .+.+..+.+|+++.| ..+|+++.+. ..+ +.+......                ++      ...
T Consensus       190 -~~~~~~~~~~~-~~i~~~S~sK~~g~~G~r~G~~~~~~-~~~-~~~~~~~~~----------------~~------~~~  243 (346)
T TIGR01141       190 -PSTLPLLAEYP-NLIVLRTLSKAFGLAGLRIGYAIANA-EII-DALNKVRAP----------------FN------LSR  243 (346)
T ss_pred             -ccHHHHHhhCC-CEEEEehhhHhhhchhhhceeeecCH-HHH-HHHHhccCC----------------CC------CCH
Confidence             11111122221 235567889999654 4588888753 322 222211000                00      012


Q ss_pred             HHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc
Q 010842          371 LRLWMVLRSYGV-LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST  449 (499)
Q Consensus       371 l~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~  449 (499)
                      +...++...+.. ..+++..++..++++++.+.|++++++++. ++....+++.+.. .          .+++.++|.++
T Consensus       244 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~-~----------~~~~~~~L~~~  311 (346)
T TIGR01141       244 LAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFPR-D----------ADALFEALLEK  311 (346)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecCC-C----------HHHHHHHHHHC
Confidence            233333333322 246777888889999999999988888854 4455666666543 1          45677888888


Q ss_pred             CCEEEEeeeECC-EEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          450 GRVYLTHTIVGG-LYMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       450 g~~~~~~~~~~g-~~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                      |+.+.....+.+ ..++|+++.    +++|+++++++|+
T Consensus       312 gI~v~~g~~f~~~~~~iRls~~----~~~~i~~~~~~l~  346 (346)
T TIGR01141       312 GIIVRDLNSYPGLPNCLRITVG----TREENDRFLAALR  346 (346)
T ss_pred             CeEEEeCCCcCCCCCeEEEecC----CHHHHHHHHHHhC
Confidence            865444333322 578999974    7899999998873

Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.

>PLN02231 alanine transaminase

Probab=99.85  E-value=3.6e-18  Score=178.54  Aligned_cols=334  Identities=14%  Similarity=0.108  Sum_probs=219.4

Q ss_pred             CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC
Q 010842          118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT  197 (499)
Q Consensus       118 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~  197 (499)
                      ...|..+.+...+.+.+.+|+.+..|.+.+.     .+.++|+|+++|+..++.+....          ++..|+++.++
T Consensus       161 ~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~p-----e~I~iT~Ga~~ai~~~~~~l~~~----------~gd~Vli~~P~  225 (534)
T PLN02231        161 TGAYSHSQGIKGLRDAIAAGIEARDGFPADP-----NDIFLTDGASPAVHMMMQLLIRS----------EKDGILCPIPQ  225 (534)
T ss_pred             ccCcCCCCCcHHHHHHHHHHHHhccCCCCCc-----ccEEEeCCHHHHHHHHHHHhccC----------CCCEEEEeCCC
Confidence            3568888889999999999999888875331     25789999999988887766421          46678899999


Q ss_pred             chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHH
Q 010842          198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANE  274 (499)
Q Consensus       198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~  274 (499)
                      +..+..++...|.   .++.++++++++|.+|+++|++++++....+..+.+|+++.++||||.+   +.+++|+++|++
T Consensus       226 Y~~y~~~~~~~g~---~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~  302 (534)
T PLN02231        226 YPLYSASIALHGG---TLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQ  302 (534)
T ss_pred             ChhHHHHHHHcCC---EEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence            9999999999999   9999999876568999999999998765555556678888999999999   567889999999


Q ss_pred             hCCEEEeeccccchhccC-ccc---hhhhc--CCC--CCceeEe-ccccccc--CCCcceEEEEe--CchhHHHhhcCCc
Q 010842          275 YGIWVHVDAAYAGSACIC-PEF---RHYLN--GIE--RVDSFSF-SPHKWLL--SYLDCCCLWVK--QPGLLVKALSTDP  341 (499)
Q Consensus       275 ~~~~lhvD~A~g~~~~~~-~~~---~~~~~--g~~--~aDsi~~-~~hK~l~--~p~~~g~l~~r--~~~~l~~~~~~~~  341 (499)
                      ||+|+++|.+|....+.. +.+   .....  +..  ....+++ +..|.++  ...-+|++.+.  +++.. +.+....
T Consensus       303 ~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~-~~l~k~~  381 (534)
T PLN02231        303 EGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVR-EQIYKVA  381 (534)
T ss_pred             cCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHH-HHHHHHH
Confidence            999999999998764421 111   11111  111  1124444 7899653  34668888763  33322 2221110


Q ss_pred             cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-----cHHHH-------HHHHHHHHHHHHHHHHHHhcCCCe
Q 010842          342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-----GVLNL-------QSHIRSDIRLAKMFEGFVKSDPRF  409 (499)
Q Consensus       342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----g~~g~-------~~~~~~~~~~a~~l~~~L~~~~~~  409 (499)
                      . ...                 ++   ..+...++...+     |...+       .++.+...+.++++.+.|++++++
T Consensus       382 ~-~~~-----------------~s---~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi  440 (534)
T PLN02231        382 S-VNL-----------------CS---NISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGV  440 (534)
T ss_pred             h-hhc-----------------CC---ChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence            0 000                 11   112222222222     11222       234566778888999999998888


Q ss_pred             EEEcCCCceEEEE-Eec-CCCCCCcch-hH-HHHHHHHHHHH-hcCCEEEEeeeEC---CEEEEEEeccCCCCcHHHHHH
Q 010842          410 EIVVPRHFALVCF-RLN-PYPHSGSAD-TE-MLNRKLLDWVN-STGRVYLTHTIVG---GLYMLRFAVGASLTDERHVVA  481 (499)
Q Consensus       410 ~~~~~~~~~~v~f-~~~-~~~~~~~~~-~~-~~~~~l~~~l~-~~g~~~~~~~~~~---g~~~lRi~~~~~~~t~~di~~  481 (499)
                      ++. +|+.+.+.| ++. +....+... .+ .....++.+|. +.|++++.+..+.   +..++|+++.   .+++++++
T Consensus       441 ~~~-~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~~---~~~e~l~e  516 (534)
T PLN02231        441 TCN-KAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTIL---PQEDKIPA  516 (534)
T ss_pred             eec-CCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEeC---CCHHHHHH
Confidence            865 666666666 332 110000000 00 00123445555 4587666666554   3457999985   68899999


Q ss_pred             HHHHHHHHHHHHhc
Q 010842          482 AWELIMEGADRLFK  495 (499)
Q Consensus       482 l~~~l~~~~~~l~~  495 (499)
                      .++.|.++.+++.+
T Consensus       517 al~RL~~~~~~~~~  530 (534)
T PLN02231        517 IVSRLTEFHKSFMD  530 (534)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999998887654

>PRK06290 aspartate aminotransferase; Provisional

Probab=99.85  E-value=1.1e-18  Score=178.13  Aligned_cols=321  Identities=12%  Similarity=0.009  Sum_probs=212.9

Q ss_pred             ccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842          120 NWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH  198 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H  198 (499)
                      .|.. ++...+.+++.+|+.+.+|.. -+.    ....++|+|+++++..++.+..+           ++..|+++.+++
T Consensus        77 ~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~----~~~I~it~Gs~~al~~~~~~~~~-----------~gd~Vlv~~P~y  140 (410)
T PRK06290         77 GYAD-NGIQEFKEAAARYMEKVFGVKDIDP----VTEVIHSIGSKPALAMLPSCFIN-----------PGDVTLMTVPGY  140 (410)
T ss_pred             CCCC-CCcHHHHHHHHHHHHHHcCCCcCCC----cceEEEccCHHHHHHHHHHHhCC-----------CCCEEEEeCCCC
Confidence            3543 677899999999999888864 210    00368899988987776665432           567788899999


Q ss_pred             hhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHh
Q 010842          199 STFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEY  275 (499)
Q Consensus       199 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~  275 (499)
                      ..+...++..|.   +++.||++++++|.+|+++|++.+.+.+      .+|+++.++||||.+-+   +++|.++|++|
T Consensus       141 ~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~l~~~~~~~~------k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~  211 (410)
T PRK06290        141 PVTGTHTKYYGG---EVYNLPLLEENNFLPDLDSIPKDIKEKA------KLLYLNYPNNPTGAVATKEFYEEVVDFAKEN  211 (410)
T ss_pred             ccHHHHHHHcCC---EEEEEecCCCcCCcCCHHHHHHhhcccc------eEEEEECCCCCCCcCCCHHHHHHHHHHHHHc
Confidence            999999999999   9999999876668899999998886533      37888889999999966   67888889999


Q ss_pred             CCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCC
Q 010842          276 GIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESN  352 (499)
Q Consensus       276 ~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~  352 (499)
                      |+|+++|.+|+.+.... .....  +.+....+.+..+..|.++.| .-+|+++.. +..+ ..+.....+...      
T Consensus       212 ~~~iI~DEaY~~~~~~~-~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~-~~l~-~~l~~~~~~~~~------  282 (410)
T PRK06290        212 NIIVVQDAAYAALTFDG-KPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGN-ELIV-KAFATVKDNNDS------  282 (410)
T ss_pred             CeEEEEecchhhceeCC-CCcChhcCCCccccEEEEeechhhcCCchhheEeEEeC-HHHH-HHHHHHHhcccc------
Confidence            99999999998754321 11111  111223457788899999655 457887753 3322 222211111100      


Q ss_pred             CcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEE-EecCCCCC
Q 010842          353 SVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCF-RLNPYPHS  430 (499)
Q Consensus       353 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f-~~~~~~~~  430 (499)
                                    ....+...++...+. .+.+++..++..+.++++.+.|++. ++.+. +|+.+.+.| ++++.. .
T Consensus       283 --------------~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~p~g~f~l~v~lp~~~-~  345 (410)
T PRK06290        283 --------------GQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV-GFKAE-MPGGTFYLYVKAPKGT-K  345 (410)
T ss_pred             --------------CCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CCCeeeEEEEECCCcc-c
Confidence                          001122233333332 2345666777788888999999887 77755 455555544 544310 0


Q ss_pred             CcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          431 GSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       431 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ... ......++.++|.++|.+++.+.... ..++|++++.+..++++.++++++|.+...++
T Consensus       346 ~~~-~~~~~~~~~~~Ll~~~~v~~~p~~~~-~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~  406 (410)
T PRK06290        346 SGI-KFENAEEFSQYLIKEKLISTVPWDDA-GHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV  406 (410)
T ss_pred             cCC-CCCCHHHHHHHHHHhCCEEEECCccc-cCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence            000 00114567888888887655442211 24799999888889999999999999887765

>TIGR00461 gcvP glycine dehydrogenase (decarboxylating)

Probab=99.85  E-value=9.2e-19  Score=188.53  Aligned_cols=365  Identities=11%  Similarity=0.052  Sum_probs=234.7

Q ss_pred             hhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHH-------HHHHHHcccCCccccc
Q 010842           51 PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLG-------EMLCACFNSVGFNWLA  123 (499)
Q Consensus        51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-------~~l~~~~n~~~~~~~~  123 (499)
                      |++++..-+..|| ++.++.++++++.++...|..   ...|.|.-..+..+|+.+-       +|+++ +.+++...++
T Consensus        31 P~~i~~~~~l~lp-~~~sE~e~~~~~~~la~~N~~---~~~fig~G~y~~~~p~~i~r~v~~~p~~~Ta-ytPyQ~EisQ  105 (939)
T TIGR00461        31 PPNILKRRPLQLE-APSKEYEALAHLKKIASKNHK---FKSYIGMGYYGTILPPVIQRNLLENPGWYTA-YTPYQPEISQ  105 (939)
T ss_pred             CHHHhcCCCCCCC-CCCCHHHHHHHHHHHHhcCCC---ccccCCCCcCCCcCChHHHHHHHhCchhhhc-CCCCChhhhh
Confidence            5566655456777 467999999999998776654   3346553333344455554       23333 3455555556


Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK  203 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k  203 (499)
                      +.....+|.+  .++++|+|++..       +..+..++|.+.- ++..++....      + ++.+|++++..|+....
T Consensus       106 G~Le~l~e~Q--t~i~eLtGm~~a-------NaSl~d~atA~aE-a~~~a~~~~~------~-~~~~vlv~~~~hP~~~~  168 (939)
T TIGR00461       106 GRLEALLNFQ--TVVSDLTGLPVA-------NASLLDEGTAAAE-AMALSFNVSK------K-KANKFFVAKDLHPQTKS  168 (939)
T ss_pred             HHHHHHHHHH--HHHHHHHCCChh-------hhhccchhhHHHH-HHHHHHHhhc------C-CCCEEEECCCCCcchHH
Confidence            6666666666  669999999865       3477787775433 3333332110      0 23569999999988664


Q ss_pred             H----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842          204 V----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV  279 (499)
Q Consensus       204 a----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l  279 (499)
                      .    +...|+   +++.++          +++|++.+  +      .+.|+++.+++ +|.+.|+++|++++|++|.++
T Consensus       169 v~~t~a~~~g~---~v~~~~----------~~~l~~~~--~------~~~v~~q~Pn~-~G~ied~~~i~~~~h~~gal~  226 (939)
T TIGR00461       169 VLHTRAKPFGI---EVIVVD----------CSDIKKAV--D------VFGCLLQYPAT-DGSILDYKQLIDALHSHKSLV  226 (939)
T ss_pred             HHHHHHHhcCc---EEEEEc----------HHHHhhcC--C------EEEEEEECCCC-CeEEecHHHHHHHHHHcCCEE
Confidence            4    357788   887773          33455554  2      24566666654 899999999999999999999


Q ss_pred             EeeccccchhccCccchhhhcCCCCCceeEeccccccc-----CCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842          280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLL-----SYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV  354 (499)
Q Consensus       280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-----~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  354 (499)
                      ++++-.-...++.+.      |--+||.++.+.++|+.     +| ..|++.+++.  +.+   ..|+-+.+...+..+.
T Consensus       227 ~~~ad~~al~ll~~P------ge~GaDi~vg~~q~fg~p~g~GGP-~aG~~a~~~~--l~r---~lPgrivG~s~D~~G~  294 (939)
T TIGR00461       227 SVAADLMALTLLTPP------GHYGADIVLGSSQRFGVPMGYGGP-HAAFFAVKDE--YNR---KMPGRIVGVSKDALGN  294 (939)
T ss_pred             EEEechHHhCCcCCH------HHcCCcEEeeCCCccCCCCCCCCC-ceeeeeecHh--hHh---hCCCCceeEEecCCCC
Confidence            996543332222211      11149999777776663     44 3899999874  222   2344444322222221


Q ss_pred             ccCCC---cccCCCCCCCc------------HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceE
Q 010842          355 VDFKD---WQVGTGRRFKS------------LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFAL  419 (499)
Q Consensus       355 ~~~~~---~~~~~sr~~~a------------l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~  419 (499)
                      ..+.-   ..-|.-||-.|            +...+.+.++|.+|++++.++...++.++.+.|++ .|++++.++.+..
T Consensus       295 ~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~-~G~~~~~~~fF~~  373 (939)
T TIGR00461       295 TALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN-DPHELINKTWFDT  373 (939)
T ss_pred             ccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-CCCcccCCCccce
Confidence            11110   00122233211            22233467789999999999999999999999998 6999988888888


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                      +.+++....          .+++.+++.++|+.+ ..   .....+++|+ +..+|++||+.+++.+.
T Consensus       374 ~~v~~~~~~----------~~~i~~~~~~~gi~l-~~---~~~~~i~~s~-~E~~t~~di~~l~~~~~  426 (939)
T TIGR00461       374 LTVKVGNGI----------SSELLKAAEEFNINL-RA---VDTTTVGIAL-DETTTKADVENLLKVFD  426 (939)
T ss_pred             EEEEeCCCC----------HHHHHHHHHHCCCee-ee---cCCCEEEEEe-ecCCCHHHHHHHHHHhc
Confidence            888874222          467888888889652 22   1224699999 49999999999999994

This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.

>PRK12414 putative aminotransferase; Provisional

Probab=99.85  E-value=3.3e-19  Score=180.99  Aligned_cols=327  Identities=10%  Similarity=0.091  Sum_probs=209.5

Q ss_pred             HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      +..+.+.+...+......|....+...+.+++.+|+++++|.+...    ....++|+|+++|+..++.+..+       
T Consensus        44 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~----~~~i~it~g~~~al~~~~~~l~~-------  112 (384)
T PRK12414         44 DPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDP----ASEVTVIASASEGLYAAISALVH-------  112 (384)
T ss_pred             CHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEECChHHHHHHHHHHhcC-------
Confidence            3344454444332223456566678899999999999999985210    01368999999988777765432       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|+++..+|..+...++..|.   +++.||++++ ++.+|++.|++++++++      .+|+++.++|+||.+
T Consensus       113 ----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~~------~~v~i~~p~NPTG~~  178 (384)
T PRK12414        113 ----PGDEVIYFEPSFDSYAPIVRLQGA---TPVAIKLSPE-DFRVNWDEVAAAITPRT------RMIIVNTPHNPSATV  178 (384)
T ss_pred             ----CCCEEEEeCCCccchHHHHHHcCC---EEEEEecCcc-ccccCHHHHHhhcCccc------EEEEEcCCCCCCCcC
Confidence                567788899999999999999999   9999998754 47899999999886533      377788999999998


Q ss_pred             ---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhh--cCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842          263 ---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL--NGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA  336 (499)
Q Consensus       263 ---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~  336 (499)
                         +++++|+++|++||+|+++|++|..+.+.........  .+...--.++.+..|.++.| .-+|++...++ .. +.
T Consensus       179 ~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~-l~-~~  256 (384)
T PRK12414        179 FSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAE-LM-DE  256 (384)
T ss_pred             CCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHH-HH-HH
Confidence               6789999999999999999999976543211111111  11111236778899998755 55788877543 22 22


Q ss_pred             hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842          337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR  415 (499)
Q Consensus       337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~  415 (499)
                      +.....+.                    ......+..+++...+.. ..+.+..+...+.++++.+.|++. ++++. ++
T Consensus       257 l~~~~~~~--------------------~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~  314 (384)
T PRK12414        257 IRKVHQFM--------------------VFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS-RFELL-PS  314 (384)
T ss_pred             HHHHHhhe--------------------ecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CC
Confidence            21111100                    001122334444444421 233445566677888899999887 67765 45


Q ss_pred             CceEEEE-EecCCCCCCcchhHHHHHHHH-HHHHhcCCEEEEeeeEC--C--EEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          416 HFALVCF-RLNPYPHSGSADTEMLNRKLL-DWVNSTGRVYLTHTIVG--G--LYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       416 ~~~~v~f-~~~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~~~--g--~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      ..+.+.| ++.+..   +    ....++. +.+.+.|+.+..+..+.  +  ..++|++++   .+++++++.++.|.+
T Consensus       315 ~gg~~~~~~~~~~~---~----~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~---~~~~~~~~~~~rl~~  383 (384)
T PRK12414        315 EGSFFMLARFRHFS---D----ESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFS---KDDATLVEGARRLCS  383 (384)
T ss_pred             CcceEEEEcccccC---C----CCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEec---CCHHHHHHHHHHHhh
Confidence            4454444 453210   0    0123344 44556787665544442  2  468999997   358889988888764

>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase

Probab=99.85  E-value=1.3e-18  Score=177.86  Aligned_cols=296  Identities=14%  Similarity=0.136  Sum_probs=191.4

Q ss_pred             HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCC
Q 010842          132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVS  211 (499)
Q Consensus       132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g  211 (499)
                      .++.+.+++++|.+..         +++++|++||..++..++...         ++.+|+++...|.++...+...|. 
T Consensus        93 ~~Le~~la~~~g~~~~---------l~~~sG~~an~~ai~~l~~~~---------~~~~v~~~~~~h~s~~~~~~~~g~-  153 (402)
T TIGR01821        93 VELEAELADLHGKESA---------LVFTSGYVANDATLATLAKII---------PGCVIFSDELNHASMIEGIRHSGA-  153 (402)
T ss_pred             HHHHHHHHHHhCCCeE---------EEECchHHHHHHHHHHhhCCC---------CCCEEEEcchHhHHHHHHHHHcCC-
Confidence            3444458899986543         888889999999988765321         345677777789999988888887 


Q ss_pred             CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhcc
Q 010842          212 PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACI  291 (499)
Q Consensus       212 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~  291 (499)
                        .+..++.       .|+++|++.++...  ...+.+|++..+++++|.+.|+++|.++|++||++++||+||+.+.+ 
T Consensus       154 --~~~~~~~-------~d~~~l~~~l~~~~--~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~-  221 (402)
T TIGR01821       154 --EKFIFRH-------NDVAHLEKLLQSVD--PNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLY-  221 (402)
T ss_pred             --eEEEECC-------CCHHHHHHHHHhcc--CCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCccccccc-
Confidence              6665542       37888988886421  12355788899999999999999999999999999999999984422 


Q ss_pred             Cccchhh--hcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842          292 CPEFRHY--LNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGRR  367 (499)
Q Consensus       292 ~~~~~~~--~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~  367 (499)
                      .+.....  ..++ ...|.+.....|.++.+.  |+++.++ + +.+.+.. ...|.+..                ...+
T Consensus       222 g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G--G~i~~~~-~-~~~~l~~~~~~~~~t~----------------~~~~  281 (402)
T TIGR01821       222 GPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG--GYIAASR-K-LIDAIRSYAPGFIFTT----------------SLPP  281 (402)
T ss_pred             CCCCCccchhccCCCCCeEEEEechhhhccCC--ceeecCH-H-HHHHHHHhCcCceecC----------------cCCH
Confidence            1211111  1122 246888889999998643  5555443 2 2222221 11221110                0000


Q ss_pred             CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH
Q 010842          368 FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN  447 (499)
Q Consensus       368 ~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~  447 (499)
                      ..+..+..+++.+...  ..+.++..++++++.+.|++. +++++ ++..+++.+.+..         .....++.++|.
T Consensus       282 ~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~i~~i~~~~---------~~~a~~~~~~L~  348 (402)
T TIGR01821       282 AIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEAL-GIPVI-PNPSHIVPVIIGD---------AALCKKVSDLLL  348 (402)
T ss_pred             HHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC---------HHHHHHHHHHHH
Confidence            1122233344433222  444556678899999999886 77665 3455666665432         123466778876


Q ss_pred             hc-CCEEEEee----eECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          448 ST-GRVYLTHT----IVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       448 ~~-g~~~~~~~----~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ++ |+ ++.+.    ...+..++|+++ +...|++||++++++|+++.+++
T Consensus       349 ~~~Gi-~v~~~~~p~~~~g~~~lRis~-~~~~t~edi~~~~~~l~~~~~~~  397 (402)
T TIGR01821       349 NKHGI-YVQPINYPTVPRGTERLRITP-TPAHTDKMIDDLVEALLLVWDRL  397 (402)
T ss_pred             hcCCE-EEEeECCCCCCCCCceEEEEe-CCCCCHHHHHHHHHHHHHHHHHc
Confidence            55 64 44432    223556899999 48899999999999999988764

This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.

>PRK07568 aspartate aminotransferase; Provisional

Probab=99.85  E-value=2.4e-18  Score=175.70  Aligned_cols=329  Identities=16%  Similarity=0.123  Sum_probs=207.3

Q ss_pred             HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      |..+.+.+..... ....|....+..++.+++.+++.+ .|.+...     ...++|+|+|+|+..++.+..+       
T Consensus        45 ~~~~~~a~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~~-----~~i~~t~G~~~al~~~~~~l~~-------  110 (397)
T PRK07568         45 PEVFFEAIKNYDE-EVLAYSHSQGIPELREAFAKYYKK-WGIDVEP-----DEILITNGGSEAILFAMMAICD-------  110 (397)
T ss_pred             CHHHHHHHHHHhc-CCcCcCCCCCCHHHHHHHHHHHHH-hCCCCCc-----ceEEEcCChHHHHHHHHHHhcC-------
Confidence            3444555554433 233455556678888887777763 3442111     1468999999998877665422       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCcc-CHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSL-SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~-d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                          ++..|+++.+.|..+...++..|+   +++.||++.+.++.+ ++++|+++++++++      +|+.+.++|+||.
T Consensus       111 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~------~v~i~~p~NPtG~  177 (397)
T PRK07568        111 ----PGDEILVPEPFYANYNGFATSAGV---KIVPVTTKIEEGFHLPSKEEIEKLITPKTK------AILISNPGNPTGV  177 (397)
T ss_pred             ----CCCEEEEecCCCccHHHHHHHcCC---EEEEeecCcccCCCCCCHHHHHHhcCccce------EEEEECCCCCCCc
Confidence                456788888888778788889999   999999874333443 68999998865443      6888899999999


Q ss_pred             cC---ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhc--CCCCCceeEecccccccC-CCcceEEEEeCchhHHH
Q 010842          262 VD---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN--GIERVDSFSFSPHKWLLS-YLDCCCLWVKQPGLLVK  335 (499)
Q Consensus       262 id---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~--g~~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~~l~~  335 (499)
                      +-   ++++|+++|+++|+++++|++|+.+....+.......  +...--.++.+.+|.++. ...+|+++..++.....
T Consensus       178 ~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~  257 (397)
T PRK07568        178 VYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAA  257 (397)
T ss_pred             cCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHH
Confidence            85   4789999999999999999999876432111111111  111112456688999875 46688888765543322


Q ss_pred             hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                      ........+                      ....+...++...+  +.+.+++..+...+.++.+.+.|++++++.+. 
T Consensus       258 ~~~~~~~~~----------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-  314 (397)
T PRK07568        258 AMKLCQARL----------------------SPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVVCE-  314 (397)
T ss_pred             HHHHhhccC----------------------CCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-
Confidence            211110000                      00122223332332  34566777777888889999999988777654 


Q ss_pred             CCCceE-EEEEecCCCCCCcchhHHHHHHHHHHHHh------cCCEEEEeeeEC-----CEEEEEEeccCCCCcHHHHHH
Q 010842          414 PRHFAL-VCFRLNPYPHSGSADTEMLNRKLLDWVNS------TGRVYLTHTIVG-----GLYMLRFAVGASLTDERHVVA  481 (499)
Q Consensus       414 ~~~~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~~------~g~~~~~~~~~~-----g~~~lRi~~~~~~~t~~di~~  481 (499)
                      .|..+. +++++....          ..++.+.+.+      .|+.+..+..+.     +..++|++++   .+++++++
T Consensus       315 ~p~g~~~~~~~l~~~~----------~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~---~~~~~~~~  381 (397)
T PRK07568        315 KPKGAFYIIAKLPVDD----------AEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYV---LNEEDLKR  381 (397)
T ss_pred             CCCcceEEEEecCCCC----------HHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEe---CCHHHHHH
Confidence            444443 445554311          2344444443      455444433331     2368999985   35799999


Q ss_pred             HHHHHHHHHHHHh
Q 010842          482 AWELIMEGADRLF  494 (499)
Q Consensus       482 l~~~l~~~~~~l~  494 (499)
                      .++.|.++.++..
T Consensus       382 ~~~~l~~~l~~~~  394 (397)
T PRK07568        382 AMEILKEALEKYN  394 (397)
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999887754

>PRK05957 aspartate aminotransferase; Provisional

Probab=99.85  E-value=1.7e-18  Score=176.05  Aligned_cols=333  Identities=14%  Similarity=0.096  Sum_probs=216.8

Q ss_pred             HHHHHHHHHHHcc-cCCcccccChhhHHHHHHHHHHHHHHcCCCCc-cccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842          103 AGFLGEMLCACFN-SVGFNWLASPASTELEIVVMDWLATMLKLPKT-FMFSGTGGGVIQNTTSDSILVTLIAARDRALDA  180 (499)
Q Consensus       103 ~~~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~-~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~  180 (499)
                      |..+.+.+...+. .....|....+...+.+++.+++++.+|.+.+ .     ...++|+|+++++..++.+..+     
T Consensus        42 ~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~-----~~i~~t~G~~~~l~~~~~~~~~-----  111 (389)
T PRK05957         42 PPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNE-----QAIVVTAGSNMAFMNAILAITD-----  111 (389)
T ss_pred             CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----CeEEEeCChHHHHHHHHHHhcC-----
Confidence            3445555555443 22345666677788999999999999997421 0     1368899998988776665432     


Q ss_pred             hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842          181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT  260 (499)
Q Consensus       181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G  260 (499)
                            ++..|+++.+.|......++..|+   +++.+|.+.  ++.+|+++|++.++++++      +|++++++|+||
T Consensus       112 ------~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~k------lv~~~~p~NPtG  174 (389)
T PRK05957        112 ------PGDEIILNTPYYFNHEMAITMAGC---QPILVPTDD--NYQLQPEAIEQAITPKTR------AIVTISPNNPTG  174 (389)
T ss_pred             ------CCCEEEEeCCCCcCHHHHHHhcCC---EEEEeecCC--CCCcCHHHHHHhcCcCce------EEEEeCCCCCCC
Confidence                  566788888888888888888999   999999864  468999999999865443      778889999999


Q ss_pred             ccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhh--cCCCCCceeEecccccccCC-CcceEEEEeCchhHH
Q 010842          261 AVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL--NGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLV  334 (499)
Q Consensus       261 ~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~  334 (499)
                      .+-|   +++|+++|+++|+++++|++|+.+...........  .....-..++.+..|.++.| .-+|+++..++  +.
T Consensus       175 ~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~--~~  252 (389)
T PRK05957        175 VVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIH--LL  252 (389)
T ss_pred             cCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHH--HH
Confidence            9977   88999999999999999999986643211111111  11111224556678988655 34888887543  22


Q ss_pred             HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                      +.+.....+....                    ...+...++...+  +...+++..++..++++++.+.|++++++..+
T Consensus       253 ~~~~~~~~~~~~~--------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~  312 (389)
T PRK05957        253 EAIKKIQDTILIC--------------------PPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTL  312 (389)
T ss_pred             HHHHHHHhhcccC--------------------CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence            2222111110000                    0123334434444  33456777778888889999999988775223


Q ss_pred             cCCCceEEE-EEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          413 VPRHFALVC-FRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       413 ~~~~~~~v~-f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      .+|..+.++ +++.+.-       +  ..++.+++.+ .|+.+..+..+.  +..++|++++.  .+++++++.++.|.+
T Consensus       313 ~~~~gg~~~~~~~~~~~-------~--~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~--~~~~~l~~~~~~l~~  381 (389)
T PRK05957        313 HPANGAFYCFLKVNTDL-------N--DFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGA--LQKATAKEGIERLVQ  381 (389)
T ss_pred             cCCCeeEEEEEeCCCCC-------C--hHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEec--CCHHHHHHHHHHHHH
Confidence            455544433 4443211       1  3567777764 676554443332  24589999953  468889999999988


Q ss_pred             HHHHHhc
Q 010842          489 GADRLFK  495 (499)
Q Consensus       489 ~~~~l~~  495 (499)
                      ..+.+..
T Consensus       382 ~~~~~~~  388 (389)
T PRK05957        382 GLKTIVQ  388 (389)
T ss_pred             HHHhhhc
Confidence            8877653

>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic

Probab=99.85  E-value=2.3e-18  Score=175.90  Aligned_cols=341  Identities=10%  Similarity=0.016  Sum_probs=214.8

Q ss_pred             hHHHHHHHHHHHcccCC-cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842          102 TAGFLGEMLCACFNSVG-FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA  180 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~~-~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~  180 (499)
                      ++..+.+.+...++... ..|...++..++.+++.+++.+. |.+-..     ...++|+|+++|+..++.+..+     
T Consensus        49 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~~~~~-----~~i~~t~G~~~al~~~~~~l~~-----  117 (401)
T TIGR01264        49 TDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DGPIEA-----DDVVLCSGCSHAIEMCIAALAN-----  117 (401)
T ss_pred             CCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CCCCCH-----HHEEECcChHHHHHHHHHHhCC-----
Confidence            34455566665555432 34656677788888877777653 332110     1468999999998877766532     


Q ss_pred             hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842          181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT  260 (499)
Q Consensus       181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G  260 (499)
                            ++..|+++.+++..+...++..|+   .++.++++.++++.+|++.|++.+.+.+      .+|+++.++||||
T Consensus       118 ------~gd~v~i~~P~y~~~~~~~~~~g~---~v~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~~p~NPtG  182 (401)
T TIGR01264       118 ------AGQNILVPRPGFPLYETLAESMGI---EVKLYNLLPDKSWEIDLKQLESLIDEKT------AALIVNNPSNPCG  182 (401)
T ss_pred             ------CCCEEEEeCCCChhHHHHHHHcCC---EEEEeecCCccCCCCCHHHHHHHhccCc------eEEEEcCCCCCCC
Confidence                  456788888899899999999999   9999998765568999999998876543      2678889999999


Q ss_pred             ccC---ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCC-ceeEecccccccCC-CcceEEEEeCch-hHH
Q 010842          261 AVD---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERV-DSFSFSPHKWLLSY-LDCCCLWVKQPG-LLV  334 (499)
Q Consensus       261 ~id---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~a-Dsi~~~~hK~l~~p-~~~g~l~~r~~~-~l~  334 (499)
                      .+-   ++++|+++|+++|+++++|++|..+............-.... -.++.+..|.++.| .-+|+++..++. .+.
T Consensus       183 ~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~  262 (401)
T TIGR01264       183 SVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILR  262 (401)
T ss_pred             CCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHH
Confidence            994   588999999999999999999987643211111111111111 24567789975444 668998876431 111


Q ss_pred             HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010842          335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI  411 (499)
Q Consensus       335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~  411 (499)
                      +.......+ ....           +      ....+...++...+   ..+.+++..++..+.++++.+.|++.|++..
T Consensus       263 ~~~~~~~~~-~~~~-----------~------~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~  324 (401)
T TIGR01264       263 DIRDGLVKL-SQRI-----------L------GPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRP  324 (401)
T ss_pred             HHHHHHHHH-hhcc-----------C------CCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence            111100000 0000           0      00122223333322   2355677777888888899999998877765


Q ss_pred             EcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          412 VVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       412 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      ..+...+.+.+++..... .+   .....++.+++. +.|+.+..+..+....++|++++   .+++++++.+++|.++.
T Consensus       325 ~~p~~g~f~~~~~~~~~~-~~---~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~---~~~~~l~~~l~rl~~~~  397 (401)
T TIGR01264       325 VMPSGAMYMMVGIEMEHF-PE---FKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLT---VPVVMMEEACSRIQEFC  397 (401)
T ss_pred             cCCCeeeEEEEEeccccc-CC---CCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEc---CCHHHHHHHHHHHHHHH
Confidence            444454555555532100 00   001345666665 56765554444544578999996   35788999999998887


Q ss_pred             HHH
Q 010842          491 DRL  493 (499)
Q Consensus       491 ~~l  493 (499)
                      +++
T Consensus       398 ~~~  400 (401)
T TIGR01264       398 ERH  400 (401)
T ss_pred             hcc
Confidence            653

This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.

>PRK07309 aromatic amino acid aminotransferase; Validated

Probab=99.85  E-value=2.2e-18  Score=175.33  Aligned_cols=334  Identities=13%  Similarity=0.125  Sum_probs=209.1

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ..+.+.+...+......|....+..++++.+.+++.+.+|.+...    ....++|+|+++|+..++.+...        
T Consensus        46 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~----~~~i~it~G~~~al~~~~~~~~~--------  113 (391)
T PRK07309         46 DHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAP----ENEILVTIGATEALSASLTAILE--------  113 (391)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhcC--------
Confidence            334444444443222345555667899999999998888863110    01468999999998887775532        


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD  263 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id  263 (499)
                         ++..|+++.++|..+..+++..|.   +++.+|.+++ +|.+|+++|++++++..   ..+.+|+.+.++||||.+-
T Consensus       114 ---~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~~---~~~~~i~l~~P~NPtG~~~  183 (391)
T PRK07309        114 ---PGDKVLLPAPAYPGYEPIVNLVGA---EIVEIDTTEN-DFVLTPEMLEKAILEQG---DKLKAVILNYPANPTGVTY  183 (391)
T ss_pred             ---CCCEEEEeCCCCcchHHHHHHcCC---EEEEEecCCc-CCcCCHHHHHHHhhccC---CCeEEEEEECCCCCCCcCc
Confidence               466788888999999999999999   9999998754 37899999999986421   1244788888999999974


Q ss_pred             ---ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC
Q 010842          264 ---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST  339 (499)
Q Consensus       264 ---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~  339 (499)
                         ++++|+++|++||+++++|++|+.+....+.......-...--.+..+..|.++.| ..+|+++... +.+. .+..
T Consensus       184 s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~-~~~~-~~~~  261 (391)
T PRK07309        184 SREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPA-EFTA-QLIK  261 (391)
T ss_pred             CHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCH-HHHH-HHHH
Confidence               58999999999999999999998764322111111111111235677899998755 4477777653 3332 2211


Q ss_pred             CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCc
Q 010842          340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHF  417 (499)
Q Consensus       340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~  417 (499)
                      ...|....                    ...+...++...+  +........++..+.++++.+.|++. ++++. +|..
T Consensus       262 ~~~~~~~~--------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~p~g  319 (391)
T PRK07309        262 SHQYLVTA--------------------ATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL-GFKII-KPDG  319 (391)
T ss_pred             HHhhcccC--------------------CChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCe
Confidence            11121110                    0122233333333  22223344455666778888888887 67765 3443


Q ss_pred             eE-EEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          418 AL-VCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       418 ~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +. +++++++..       .....++.+++. +.|..+..+..+.  +..++|++++   .+.++++..+++|+++.+++
T Consensus       320 g~~~~~~l~~~~-------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~~i~~l~~~~~~~  389 (391)
T PRK07309        320 AFYIFAKIPAGY-------NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA---ASMETIKEAMKRLKEYMEEH  389 (391)
T ss_pred             eEEEEEECCCCC-------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHHHHHhh
Confidence            43 333443210       001345565544 4565444443332  3568999996   25789999999999888765

>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions

Probab=99.85  E-value=3.3e-19  Score=179.32  Aligned_cols=318  Identities=16%  Similarity=0.116  Sum_probs=204.0

Q ss_pred             HHHHHHcccCCccccc-ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc
Q 010842          108 EMLCACFNSVGFNWLA-SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM  186 (499)
Q Consensus       108 ~~l~~~~n~~~~~~~~-~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~  186 (499)
                      +.+...+...  .+.. ++...++|++    +++++|.+.         ++.+++||.|+..++.+..-.          
T Consensus         9 ~~v~~~l~s~--~~~~~g~~~~~fE~~----~a~~~g~~~---------~~~~~sgt~Al~~al~~l~~~----------   63 (363)
T PF01041_consen    9 DAVLEVLRSG--WLSTYGPYVEEFEKE----FAEYFGVKY---------AVAVSSGTSALHLALRALGLG----------   63 (363)
T ss_dssp             HHHHHHHHHT--CCSSSSHHHHHHHHH----HHHHHTSSE---------EEEESSHHHHHHHHHHHTTGG----------
T ss_pred             HHHHHHHHhC--CccCCCHHHHHHHHH----HHHHhCCCe---------EEEeCChhHHHHHHHHhcCCC----------
Confidence            3444555433  3334 7889999999    888888665         499999999999998875321          


Q ss_pred             CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChh
Q 010842          187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVE  266 (499)
Q Consensus       187 ~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~  266 (499)
                      ++.+|++|..++.+...++..+|+   .+++++++++ ++.||+++|+++|+++++      +|++++   ..|...|++
T Consensus        64 ~gdeVi~p~~t~~~~~~ai~~~G~---~pv~~Di~~~-~~~id~~~~~~~i~~~t~------ai~~~h---~~G~~~d~~  130 (363)
T PF01041_consen   64 PGDEVIVPAYTFPATASAILWAGA---EPVFVDIDPE-TLNIDPEALEKAITPKTK------AILVVH---LFGNPADMD  130 (363)
T ss_dssp             TTSEEEEESSS-THHHHHHHHTT----EEEEE-BETT-TSSB-HHHHHHHHHTTEE------EEEEE----GGGB---HH
T ss_pred             cCceEecCCCcchHHHHHHHHhcc---EEEEEeccCC-cCCcCHHHHHHHhccCcc------EEEEec---CCCCcccHH
Confidence            578899999999999999999999   9999999975 589999999999998765      676666   678889999


Q ss_pred             HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEec--ccccccCCCcceEEEEeCchhHHHhhcCCccCC
Q 010842          267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFS--PHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYL  344 (499)
Q Consensus       267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~--~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl  344 (499)
                      +|.++|+++|++++.|+|++.+...    +....|- ..|..++|  +.|.+.+ .+.|++++++++...+.......-.
T Consensus       131 ~i~~~~~~~~i~lIeD~a~a~g~~~----~g~~~G~-~gd~~~fSf~~~K~i~~-geGG~v~~~~~~~~~~~~~~~~~g~  204 (363)
T PF01041_consen  131 AIRAIARKHGIPLIEDAAQAFGARY----KGRPVGS-FGDIAIFSFHPTKIITT-GEGGAVVTNDPELAERARALRNHGR  204 (363)
T ss_dssp             HHHHHHHHTT-EEEEE-TTTTT-EE----TTEETTS-SSSEEEEESSTTSSS-S-SS-EEEEESTHHHHHHHHHHTBTTE
T ss_pred             HHHHHHHHcCCcEEEccccccCcee----CCEeccC-CCCceEecCCCCCCCcC-CCCeeEEecHHHHHHHhhhhhccCc
Confidence            9999999999999999999876533    2222221 23555554  5688843 4678898988765433321111000


Q ss_pred             CCCCCCCCCcccCCCcc----cCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC----
Q 010842          345 KNKPSESNSVVDFKDWQ----VGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH----  416 (499)
Q Consensus       345 ~~~~~~~~~~~~~~~~~----~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~----  416 (499)
                      ...        ....+.    +...-|+..+.+.+.+..  .+.+++++++..++++++.+.|.+.+++..+..+.    
T Consensus       205 ~~~--------~~~~~~~~~~~g~n~rm~~~~AAigl~Q--L~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~  274 (363)
T PF01041_consen  205 SRD--------AFRRYRHELPPGYNFRMSELQAAIGLAQ--LKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAER  274 (363)
T ss_dssp             ETS--------ECSTTEESSSS--B-B-BHHHHHHHHHH--HHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEE
T ss_pred             Ccc--------ccccccccccCCcccccHHHHHHHHHHH--HHHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccc
Confidence            000        000011    112223334444444444  48899999999999999999999999987765322    


Q ss_pred             --ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee--eE------CC----------------EEEEEEecc
Q 010842          417 --FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT--IV------GG----------------LYMLRFAVG  470 (499)
Q Consensus       417 --~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~------~g----------------~~~lRi~~~  470 (499)
                        ...+.+++.+..      . ...+.+.+.|.++|+-.....  .+      ..                +..+.+-+ 
T Consensus       275 ~~~~~f~i~~~~~~------~-~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~-  346 (363)
T PF01041_consen  275 SSYYRFPIRLPDEA------L-ADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPI-  346 (363)
T ss_dssp             BCESSEEEEETCCG------C-STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEH-
T ss_pred             cccccccccccccc------c-chHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcC-
Confidence              223455555421      0 115678888888886432211  11      00                12355544 


Q ss_pred             CCCCcHHHHHHHHHHHH
Q 010842          471 ASLTDERHVVAAWELIM  487 (499)
Q Consensus       471 ~~~~t~~di~~l~~~l~  487 (499)
                      ++..+++|+++++++|+
T Consensus       347 ~~~lt~edv~~I~~~ir  363 (363)
T PF01041_consen  347 HPRLTEEDVDYIAEAIR  363 (363)
T ss_dssp             STTSCHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHhhccC
Confidence            78899999999999885

The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....

>PRK08960 hypothetical protein; Provisional

Probab=99.85  E-value=1.6e-18  Score=176.24  Aligned_cols=327  Identities=14%  Similarity=0.069  Sum_probs=208.3

Q ss_pred             HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      |..+.+.+...+......|...++..++++.+.+|+.+.+|.+.+.     ...++|+|+++|+..++.+..+       
T Consensus        47 ~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~it~G~~~al~~~~~~~~~-------  114 (387)
T PRK08960         47 AEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDP-----ERILVTPGGSGALLLASSLLVD-------  114 (387)
T ss_pred             CHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCCh-----hhEEEccCcHHHHHHHHHHhcC-------
Confidence            4445555565554333457667778899999999998887763221     2468999999998877765422       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|+++.++|..+...+...|.   +++.+|++.+++|.+|+++|++.+++++      .+++.+.++||||.+
T Consensus       115 ----~gd~vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~p~NPtG~~  181 (387)
T PRK08960        115 ----PGKHWLLADPGYPCNRHFLRLVEG---AAQLVPVGPDSRYQLTPALVERHWNADT------VGALVASPANPTGTL  181 (387)
T ss_pred             ----CCCEEEEcCCCCcchHHHHHhcCC---eEEEEecCcccCCCCCHHHHHHHhCccc------eEEEEECCCCCCCcC
Confidence                567899999999999999999999   9999999876668999999999886543      267788899999999


Q ss_pred             CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhc
Q 010842          263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALS  338 (499)
Q Consensus       263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~  338 (499)
                      -+   +++|+++|++||+|+++|++|..+... +...... .+..--.+..+.+|.++.| .-+|+++..+. .+ +.+.
T Consensus       182 ~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~-~~~~~~~-~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~-~~-~~~~  257 (387)
T PRK08960        182 LSRDELAALSQALRARGGHLVVDEIYHGLTYG-VDAASVL-EVDDDAFVLNSFSKYFGMTGWRLGWLVAPPA-AV-PELE  257 (387)
T ss_pred             cCHHHHHHHHHHHHHcCCEEEEEccccccccC-CCCCChh-hccCCEEEEeecccccCCcccEEEEEEcCHH-HH-HHHH
Confidence            66   567777899999999999999765331 1111111 2221224567899998744 44888887543 22 2221


Q ss_pred             CCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842          339 TDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG---VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR  415 (499)
Q Consensus       339 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~  415 (499)
                      ....+...                    ....+...++...+.   .+.+++..+...+.++.+.+.|++. ++.+...|
T Consensus       258 ~~~~~~~~--------------------~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~p  316 (387)
T PRK08960        258 KLAQNLYI--------------------SASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL-GFGIAVEP  316 (387)
T ss_pred             HHHhhhcc--------------------CCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCcCC
Confidence            11000000                    001222233333331   2445555666677788888889886 56543334


Q ss_pred             CceE-EEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECC---EEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          416 HFAL-VCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGG---LYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       416 ~~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g---~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      ..+. +.+++....      .+  ..++.+++. ++|+.+..+..+..   ..++|++++.   +.+.+...++.|.++.
T Consensus       317 ~g~~f~~~~~~~~~------~~--~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~---~~~~l~~al~~l~~~~  385 (387)
T PRK08960        317 QGAFYLYADISAFG------GD--AFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ---SLPRLQEAVERIARGL  385 (387)
T ss_pred             CeeEEEEEeccccC------CC--HHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC---CHHHHHHHHHHHHHHH
Confidence            4333 334443211      01  355666665 45755444433432   3589999972   5677777777776654

>TIGR01366 serC_3 phosphoserine aminotransferase, putative

Probab=99.84  E-value=3.1e-19  Score=178.91  Aligned_cols=308  Identities=16%  Similarity=0.076  Sum_probs=197.1

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEE-cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVI-QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-  200 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-  200 (499)
                      .++...++-+++++.+++++|.++..      ..+| ++|||.|+-.++.....           ++ .++++...|.+ 
T Consensus        35 r~~~f~~~~~~~r~~l~~l~~~~~~~------~v~f~~gs~T~a~~~~~~~l~~-----------~~-~l~i~~G~~~~~   96 (361)
T TIGR01366        35 RQAPVKNLVGRVREGLAELFSLPDGY------EVILGNGGATAFWDAATFGLIE-----------KK-SLHLSFGEFSSK   96 (361)
T ss_pred             CChHHHHHHHHHHHHHHHHhCCCCCc------eEEEECCchhHHHHHHHHhccc-----------cc-ccEEecCHHHHH
Confidence            45667788888999999999996432      3466 46799887777654421           12 23333344543 


Q ss_pred             HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842          201 FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH  280 (499)
Q Consensus       201 ~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh  280 (499)
                      +.+.+.....+. ++..++++..+  .++.+     +.++      +.+|++++.+|.+|.+.|+++|   +|++|+.++
T Consensus        97 ~~~~a~~~~~~~-~~~~~~~~~~~--~~~~~-----~~~~------~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~i  159 (361)
T TIGR01366        97 FAKAVKLAPWLG-EPIIVTADPGS--APEPQ-----ADPG------VDVIAWAHNETSTGVAVPVRRP---EGSDDALVV  159 (361)
T ss_pred             HHHHHHhhhccC-CceEEecCCCC--CCCCc-----cCCC------CCEEEEcccCCccceecccccc---cccCCCeEE
Confidence            555566543222 57777776432  34332     2222      3489999999999999999998   589999999


Q ss_pred             eeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC------ccCCCCCCCCCCCc
Q 010842          281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD------PEYLKNKPSESNSV  354 (499)
Q Consensus       281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~------~~yl~~~~~~~~~~  354 (499)
                      ||++.+.+....+-        +.+|.+++++||+++.|.|.++++++++.. .+.....      +.|+...       
T Consensus       160 VDavqs~g~~~idv--------~~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~-~~~~~~~~~~~~~p~~~d~~-------  223 (361)
T TIGR01366       160 IDATSGAGGLPVDI--------AETDVYYFAPQKNFASDGGLWLAIMSPAAL-ERIEAIAASGRWVPEFLSLP-------  223 (361)
T ss_pred             EEcCccccCCCCCH--------HHCCEEEEEchhhcCCCCceEEEEECHHHH-hhhhcccCCCCCCchhhhHH-------
Confidence            99998776554431        138999999999999887877777777532 2211110      1121110       


Q ss_pred             ccCCCcccCCCCCCC-----cHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-C--CceE-EEEEe
Q 010842          355 VDFKDWQVGTGRRFK-----SLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-R--HFAL-VCFRL  424 (499)
Q Consensus       355 ~~~~~~~~~~sr~~~-----al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~--~~~~-v~f~~  424 (499)
                       .......+.+..+.     .+.+-.+++.+-.+ |++.+.++..++++++++.+.+.+.++++.+ +  .... .++.+
T Consensus       224 -~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~  302 (361)
T TIGR01366       224 -TAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDF  302 (361)
T ss_pred             -HHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEEC
Confidence             00011111122221     12556677777666 6999999999999999999999977776642 2  1222 23444


Q ss_pred             cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee-eECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT-IVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      . .+        .....+.+.|.++|+.+..+. .+. ...+|++++ .++|.+||++++++|+++.+++
T Consensus       303 ~-~g--------~~~~~v~~~L~~~gI~i~~~~~~l~-~~~vRis~~-~~~t~~di~~l~~al~~~~~~~  361 (361)
T TIGR01366       303 V-DD--------IDAATVAKILRANGIVDTEPYRKLG-RNQLRVAMF-PAIDPDDVEALTECVDWVVERL  361 (361)
T ss_pred             C-Cc--------cCHHHHHHHHHHCCCeeccCccccC-CCcEEEEcC-CCCCHHHHHHHHHHHHHHHhhC
Confidence            2 21        114557777777786543321 222 357999997 7899999999999999987654

This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.

>PRK06348 aspartate aminotransferase; Provisional

Probab=99.84  E-value=2.1e-18  Score=175.05  Aligned_cols=326  Identities=12%  Similarity=0.071  Sum_probs=210.1

Q ss_pred             HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      +.++.+++....+ ....|....+...+++++.+|+.+..|++-..     .+.++|+|+++|+..++.+...       
T Consensus        45 ~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~-----~~i~it~G~~~al~~~~~~~~~-------  111 (384)
T PRK06348         45 ESIINAAFEDAKK-GHTRYTDSGGDVELIEEIIKYYSKNYDLSFKR-----NEIMATVGACHGMYLALQSILD-------  111 (384)
T ss_pred             HHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCh-----hhEEEcCChHHHHHHHHHHhcC-------
Confidence            4444444443322 23456666667889999999998887764321     2568999999998877776532       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|+++.++|..+..+++.+|.   .++.+|.+++++|.+|+++|++.+++.++      +|+++.++||||.+
T Consensus       112 ----~gd~vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~~------~v~l~~p~NPtG~~  178 (384)
T PRK06348        112 ----PGDEVIIHEPYFTPYKDQIEMVGG---KPIILETYEEDGFQINVKKLEALITSKTK------AIILNSPNNPTGAV  178 (384)
T ss_pred             ----CCCEEEEeCCCCcchHHHHHHcCC---EEEEecCCcCcCCcCCHHHHHHhhCcCcc------EEEEeCCCCCCCcC
Confidence                566788999999999999999999   89999875444588999999998865332      56677899999999


Q ss_pred             C---ChhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccC-CCcceEEEEeCchhHHHh
Q 010842          263 D---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLS-YLDCCCLWVKQPGLLVKA  336 (499)
Q Consensus       263 d---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~~l~~~  336 (499)
                      -   .+++|.++|+++++++++|.+|+.+.... .....  +.+...-..+..+..|.++. ..-+|+++..+.  +.+.
T Consensus       179 ~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~--~~~~  255 (384)
T PRK06348        179 FSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDY--IIET  255 (384)
T ss_pred             CCHHHHHHHHHHHHHCCeEEEEecccccceeCC-CccchhhcCCCcCcEEEEecchhccCCccccceeeecCHH--HHHH
Confidence            5   47888999999999999999998765421 11111  11112223566788999974 466888887532  2222


Q ss_pred             hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842          337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP  414 (499)
Q Consensus       337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~  414 (499)
                      +.....+...                    ....+...++...+  ..+.+++..+...+.++++.+.|++++++++. +
T Consensus       256 ~~~~~~~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~-~  314 (384)
T PRK06348        256 AKIINEGICF--------------------SAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLH-P  314 (384)
T ss_pred             HHHHHHhccC--------------------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-c
Confidence            2111111000                    00123333333333  22345566666677788899999888777654 5


Q ss_pred             CCceEE-EEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          415 RHFALV-CFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       415 ~~~~~v-~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      |..+.+ +++++...        ....++.+.+. +.|+.+..+..+.  +..++|++++   .+.++++..++.|+++
T Consensus       315 p~gg~~~~~~~~~~~--------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~al~~l~~~  382 (384)
T PRK06348        315 PKGSIYAFINIKKTG--------LSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT---VGIEVLEEAFNRIEKM  382 (384)
T ss_pred             CCeeEEEEEecccCC--------CCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec---CCHHHHHHHHHHHHhh
Confidence            555544 34443211        01345666665 4576555444443  2478999985   4788899999888754

>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative

Probab=99.84  E-value=2.3e-18  Score=175.12  Aligned_cols=306  Identities=11%  Similarity=0.030  Sum_probs=197.7

Q ss_pred             cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh
Q 010842          121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST  200 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s  200 (499)
                      |....+...+..++.+++++++|.+..         +++++|+++++.++.+..+           ++.+|+++...|.+
T Consensus        70 ~~~~~g~~~l~~~l~~~l~~~~g~~~~---------i~~~sG~~a~~~a~~~~~~-----------~gd~vi~~~~~~~~  129 (385)
T TIGR01825        70 VRTIAGTLRLHEELEEKLAKFKKTEAA---------LVFQSGFNTNQGVLSALLR-----------KGDIVLSDELNHAS  129 (385)
T ss_pred             cCcccCCcHHHHHHHHHHHHHhCCCcE---------EEECcHHHHHHHHHHHhCC-----------CCCEEEEEccccHH
Confidence            444455677888888999999997543         5666668888877766532           45678889999999


Q ss_pred             HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842          201 FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH  280 (499)
Q Consensus       201 ~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh  280 (499)
                      +..++...|.   .+..++       .+|++++++.+.+...  .+..+|+.....+++|.+.|+++|+++|++||+|++
T Consensus       130 ~~~~~~~~g~---~~~~~~-------~~d~~~l~~~l~~~~~--~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li  197 (385)
T TIGR01825       130 IIDGLRLTKA---TKKIYK-------HADMDDLDRVLRENPS--YGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTY  197 (385)
T ss_pred             HHHHHHhcCC---ceEEeC-------CCCHHHHHHHHHhhcc--CCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEE
Confidence            9988888887   766553       5789999998875421  224467777778999999999999999999999999


Q ss_pred             eeccccchhccCccc-hhhhcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccC
Q 010842          281 VDAAYAGSACICPEF-RHYLNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDF  357 (499)
Q Consensus       281 vD~A~g~~~~~~~~~-~~~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~  357 (499)
                      +|++|+.+.+..... .....++ ...|.+..+.+|+++.+  .|+++.+ ++.. +.+.. ...|....          
T Consensus       198 ~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~--gG~~~~~-~~~~-~~~~~~~~~~~~~~----------  263 (385)
T TIGR01825       198 VDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVV--GGYAAGH-KELI-EYLKNRARPFLFST----------  263 (385)
T ss_pred             EECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcC--CCEEecC-HHHH-HHHHHhCccccccC----------
Confidence            999997553321000 0000111 34788889999999754  2665543 3322 22221 11121110          


Q ss_pred             CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHH
Q 010842          358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEM  437 (499)
Q Consensus       358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~  437 (499)
                            .+.......+..++..+.  ...+..++..++++++.+.|++. ++++. .+..+.+.+.+.+         ..
T Consensus       264 ------~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~---------~~  324 (385)
T TIGR01825       264 ------AQPPAVVAALAAAVDELQ--RSPELMERLWDNTRFFKAGLGKL-GYDTG-GSETPITPVVIGD---------EK  324 (385)
T ss_pred             ------CCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEECC---------HH
Confidence                  000011122233333321  12345677778889999999886 77765 3444555555432         11


Q ss_pred             HHHHHHHHHHhcCCEEEEeeeE----CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          438 LNRKLLDWVNSTGRVYLTHTIV----GGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       438 ~~~~l~~~l~~~g~~~~~~~~~----~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ....+.+.|.++|+.. .+..+    .+..++|+++ +..++++||++++++|+++.+++
T Consensus       325 ~~~~~~~~L~~~gi~v-~~~~~~~~~~~~~~iRi~~-~~~~~~e~i~~~~~~l~~~~~~~  382 (385)
T TIGR01825       325 AAQEFSRRLFDEGIFA-QSIVFPTVPRGTARIRNIP-TAEHTKDDLDQALDAYEKVGKEL  382 (385)
T ss_pred             HHHHHHHHHHHCCcEE-cccCCCCCCCCCceEEEEE-cCCCCHHHHHHHHHHHHHHHHHh
Confidence            2456788888887643 32211    2446799988 47799999999999999987653

This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.

>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]

Probab=99.84  E-value=8.3e-20  Score=166.68  Aligned_cols=302  Identities=16%  Similarity=0.234  Sum_probs=203.4

Q ss_pred             cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842          119 FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH  198 (499)
Q Consensus       119 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H  198 (499)
                      ..|...|-+..||++    +++++|-+.         |+|+++||++|+.|++....+          ++..|++.+.+|
T Consensus        50 dVyGeD~tt~rLE~~----vA~l~GKEA---------gLFv~SGTmgNllaIm~Hc~~----------rg~eii~gd~~H  106 (384)
T KOG1368|consen   50 DVYGEDPTTNRLEQR----VAELFGKEA---------GLFVPSGTMGNLLAIMVHCHQ----------RGSEIIVGDRAH  106 (384)
T ss_pred             ccccCCccHHHHHHH----HHHHhCccc---------eeeecccccccHHHHHHHhcC----------CCceEEeccchh
Confidence            467778889999999    899999755         599999999999999988765          677899999999


Q ss_pred             hhHHHHH---HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH-HcCCcc-EEEEEecCCCccc-ccCCh---hHHH
Q 010842          199 STFAKVC---KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV-EAGLVP-LFLCATVGTTSTT-AVDNV---EPLA  269 (499)
Q Consensus       199 ~s~~ka~---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~-~~g~~p-~~vv~t~gtt~~G-~id~l---~~I~  269 (499)
                      .-..++.   .+.|+   .++.|...+++  .||++++|++|.... .-...| -+|+.-.-.+.+| .+-||   ++|.
T Consensus       107 I~~~E~gg~s~l~gv---~~~tv~~e~dg--tm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~  181 (384)
T KOG1368|consen  107 IHRYEQGGISQLAGV---HVRTVKNENDG--TMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVK  181 (384)
T ss_pred             eeehhccChhhhccc---eeEeeeeCCCC--eeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHH
Confidence            7655543   34455   77777766554  999999999998432 112233 3455544445556 66665   5667


Q ss_pred             HHHHHhCCEEEeeccc--cchhc-cCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCC
Q 010842          270 EVANEYGIWVHVDAAY--AGSAC-ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKN  346 (499)
Q Consensus       270 ~ia~~~~~~lhvD~A~--g~~~~-~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~  346 (499)
                      ++|+++|+.||+|||-  -+... -+|- +..   .+.+||+++...|.+++|.|+  +++-+++-+.+     +.+++.
T Consensus       182 ~lak~~glkLH~DGARi~NAavasgV~v-k~i---~~~fDSVsiCLSKglgAPVGS--ViVG~k~FI~k-----A~~~RK  250 (384)
T KOG1368|consen  182 ALAKRHGLKLHMDGARIFNAAVASGVPV-KKI---CSAFDSVSICLSKGLGAPVGS--VIVGSKDFIDK-----ARHFRK  250 (384)
T ss_pred             HHHhccCCeeecchhhhhhHHHHcCCCH-HHH---HHhhhhhhhhhhccCCCCccc--EEEccHHHHHH-----HHHHHH
Confidence            7899999999999983  22211 1111 111   234899999999999999554  44555433322     222222


Q ss_pred             CCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEec
Q 010842          347 KPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLN  425 (499)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~  425 (499)
                                    .+.+|-|-...-..++|-.+. +.+ ..+++-.+.|+.+++.+.+.+++++-.+ .+.+++.+.+.
T Consensus       251 --------------alGGGmRQsGvLaaaaLval~-~~~-~~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~  314 (384)
T KOG1368|consen  251 --------------ALGGGMRQSGVLAAAALVALD-ENV-PLLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLC  314 (384)
T ss_pred             --------------HhcCchhHHHHHHHHHHHHhh-cch-HHHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecc
Confidence                          122333332332333343332 222 2667777888888888888877887655 57777776553


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      -..        -..+.+++.+.+.|...+....    ..+|+++ |+..|.++++.+++.+.+
T Consensus       315 q~~--------~~~~~l~~~~~k~gi~lm~~~s----~r~Rivl-h~Qvt~~~ve~~~~~~~k  364 (384)
T KOG1368|consen  315 QAR--------LTAEELCKFLEKNGILLMGGAS----RRIRIVL-HHQVTDEDVEYVKSVLSK  364 (384)
T ss_pred             ccc--------CCHHHHHHHHHHCCeEEeeccc----cceEEEE-EEecCHHHHHHHHHHHHH
Confidence            321        2256788888889977766533    3489999 799999999999999953

>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]

Probab=99.84  E-value=4.3e-18  Score=160.74  Aligned_cols=382  Identities=13%  Similarity=0.092  Sum_probs=246.8

Q ss_pred             CHHHHHHHHHhhhcCCC------CCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHH
Q 010842           68 SFETILKDVQEKIIPGI------THWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATM  141 (499)
Q Consensus        68 ~~~~i~~~~~~~~~~~~------~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l  141 (499)
                      +...++..+...-.++.      .....|.-++-+++.......+.+.+.+..   ...|..+.+...-.+++.+++-+-
T Consensus        43 tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk---~N~Yaps~G~~~AR~AVAeYl~~~  119 (447)
T KOG0259|consen   43 TIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGK---GNGYAPSVGILPARRAVAEYLNRD  119 (447)
T ss_pred             cHHHHHHHHhhcCCcccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCC---CCCcCCccccHHHHHHHHHHhhcC
Confidence            34455555544433333      123456667766665555555555544432   246777777777777766654443


Q ss_pred             cCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC
Q 010842          142 LKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS  221 (499)
Q Consensus       142 ~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~  221 (499)
                      +..+-+     ..+.++|+|.++|+-+++.+.-+           ++..|++++++++-+..-+...|+   +|+..+.-
T Consensus       120 l~~kl~-----a~DV~ltsGC~qAIe~~i~~LA~-----------p~aNILlPrPGfp~Y~~~a~~~~l---EVR~ydlL  180 (447)
T KOG0259|consen  120 LPNKLT-----ADDVVLTSGCSQAIELAISSLAN-----------PGANILLPRPGFPLYDTRAIYSGL---EVRYYDLL  180 (447)
T ss_pred             CCCccC-----cCceEEeccchHHHHHHHHHhcC-----------CCCceecCCCCCchHHHhhhhcCc---eeEeeccc
Confidence            333211     12569999999999998877533           677899999999999889999999   99999988


Q ss_pred             CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCccchhh
Q 010842          222 VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY  298 (499)
Q Consensus       222 ~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~  298 (499)
                      ++.+|++|++.+|..++++|.      +++++.++||+|.+   +.|++|+++|+++|+.++.|..|+-..+....+-+.
T Consensus       181 Pe~~weIDL~~veal~DENT~------AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpm  254 (447)
T KOG0259|consen  181 PEKDWEIDLDGVEALADENTV------AIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPM  254 (447)
T ss_pred             CcccceechHHHHHhhccCee------EEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccch
Confidence            777899999999999999985      89999999999999   779999999999999999999998776544333222


Q ss_pred             hcCCCCCceeEec-ccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcH--HHH
Q 010842          299 LNGIERVDSFSFS-PHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSL--RLW  374 (499)
Q Consensus       299 ~~g~~~aDsi~~~-~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al--~~~  374 (499)
                      ..--..+-++|.+ ..|-..+| .-.|++.+.|+.-.   |... ..+.       +..++.+.+.+   +...+  ++=
T Consensus       255 g~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gv---f~~~-~~~q-------~~~~~~~~~~~---p~TiiQ~AlP  320 (447)
T KOG0259|consen  255 GKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGV---FRDT-KVVQ-------GIKNFLDIIPG---PATIIQGALP  320 (447)
T ss_pred             hhccccCceEeecccccccccCCceeeeEEEeccccc---ccch-HHHH-------HHHHHHhccCC---ccHhHHHHhH
Confidence            1111224455554 35555555 67899998886421   1000 0000       00001000000   00001  011


Q ss_pred             HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCC-EE
Q 010842          375 MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGR-VY  453 (499)
Q Consensus       375 ~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~-~~  453 (499)
                      -.|..--++-+...+.-...+++...++|+++|++.....|...+..+.-.+.....+  + .....++.+|.++.. ++
T Consensus       321 ~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~--~-~dD~dFc~kL~~Eesv~~  397 (447)
T KOG0259|consen  321 DILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLFPD--I-EDDVDFCQKLAREESVIC  397 (447)
T ss_pred             HHHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccchhhhcc--c-cccHHHHHHHhhhcceEE
Confidence            1222223567788888888999999999999999986666765554432111100000  0 012346666665554 45


Q ss_pred             EEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhccC
Q 010842          454 LTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGS  497 (499)
Q Consensus       454 ~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~~  497 (499)
                      +.+..+.-++|+|++++   +..+.+++.+++|+++..+-.+++
T Consensus       398 LPG~af~~~nw~Ri~i~---~~~~~leea~~Rik~Fc~RH~~~~  438 (447)
T KOG0259|consen  398 LPGQAFGLKNWLRIVIT---VEEEMLEEAFSRIKEFCDRHSKEQ  438 (447)
T ss_pred             eccccccCCCeEEEEEc---cChHHHHHHHHHHHHHHHhhhhcc
Confidence            55666777899999997   678899999999999998876443

>PRK15029 arginine decarboxylase; Provisional

Probab=99.84  E-value=2.9e-18  Score=182.23  Aligned_cols=173  Identities=17%  Similarity=0.182  Sum_probs=140.0

Q ss_pred             HHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCC
Q 010842          135 MDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPAN  214 (499)
Q Consensus       135 ~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~  214 (499)
                      .+..+++||.+.++        ++++|+|.+|..++.++..           ++..|++++++|.|+..++.+.|+   .
T Consensus       211 q~~aA~~fgA~~t~--------FlvNGST~gn~a~i~a~~~-----------~gd~Vlv~RN~HKSv~~al~L~ga---~  268 (755)
T PRK15029        211 EKYAARVFGADRSW--------SVVVGTSGSNRTIMQACMT-----------DNDVVVVDRNCHKSIEQGLILTGA---K  268 (755)
T ss_pred             HHHHHHHhCCCcEE--------EEeCChhHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---e
Confidence            35699999999987        8899999999977776643           677899999999999999999999   9


Q ss_pred             eEEeeCCCCCC---CccC-----HHHHHHHHHHHH--H--cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842          215 IRALPTSVDAN---FSLS-----PQLLRRAVEADV--E--AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD  282 (499)
Q Consensus       215 v~~v~~~~~~~---~~~d-----~~~L~~~i~~~~--~--~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD  282 (499)
                      +++++...+..   ..++     ++.++++|++..  +  ++.+|.+|++|.+|. .|.+-++++|+++|++++++|+||
T Consensus       269 Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvD  347 (755)
T PRK15029        269 PVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFD  347 (755)
T ss_pred             EEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEE
Confidence            99987543211   2344     999999997642  2  346788888888765 799999999999999999999999


Q ss_pred             ccccchhccCccchh--hhc----CCCCCc-eeEecccccccCCCcceEEEEeCc
Q 010842          283 AAYAGSACICPEFRH--YLN----GIERVD-SFSFSPHKWLLSYLDCCCLWVKQP  330 (499)
Q Consensus       283 ~A~g~~~~~~~~~~~--~~~----g~~~aD-si~~~~hK~l~~p~~~g~l~~r~~  330 (499)
                      +|||+.+.+.|.++.  .+.    .-.++| .++.|.||.|.+-..++++.+++.
T Consensus       348 EAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~  402 (755)
T PRK15029        348 EAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG  402 (755)
T ss_pred             CccccccccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence            999998877776653  121    113588 999999999998889999999765

>PRK07337 aminotransferase; Validated

Probab=99.84  E-value=1.5e-18  Score=176.56  Aligned_cols=328  Identities=14%  Similarity=0.048  Sum_probs=209.7

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ..+.+.+...+......|....+...+++++.+|+.+.+|..-..     ...++|+|+++|+..++.+..+        
T Consensus        46 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~i~~t~G~~~al~~~~~~l~~--------  112 (388)
T PRK07337         46 EPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAP-----ERIVVTAGASAALLLACLALVE--------  112 (388)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----HhEEEecCcHHHHHHHHHHhcC--------
Confidence            344555555554334456666678899999999999888863221     1468999999998776665432        


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD  263 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id  263 (499)
                         ++..|+++.++|......++..|.   +++.+|++.+++|.+|+++|++.+.+.++      +|+.+.++|+||.+-
T Consensus       113 ---~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~v~l~~p~NPtG~~~  180 (388)
T PRK07337        113 ---RGDEVLMPDPSYPCNRHFVAAAEG---RPVLVPSGPAERFQLTAADVEAAWGERTR------GVLLASPSNPTGTSI  180 (388)
T ss_pred             ---CCCEEEEeCCCchhhHHHHHHcCC---EEEEeecCCccCCcCCHHHHHhhcCccce------EEEEECCCCCCCcCc
Confidence               567899999999999999999999   99999998655689999999998865433      677889999999985


Q ss_pred             C---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCcee-EecccccccCC-CcceEEEEeCchhHHHhhc
Q 010842          264 N---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSF-SFSPHKWLLSY-LDCCCLWVKQPGLLVKALS  338 (499)
Q Consensus       264 ~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi-~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~  338 (499)
                      +   +++|+++|+++++|+++|.+|..+... +...... .+ ..+.+ +.+.+|.++.| ..+|+++..+.  +.+.+.
T Consensus       181 ~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~-~~-~~~vi~~~S~SK~~~~~G~RiG~~~~~~~--l~~~l~  255 (388)
T PRK07337        181 APDELRRIVEAVRARGGFTIVDEIYQGLSYD-AAPVSAL-SL-GDDVITINSFSKYFNMTGWRLGWLVVPEA--LVGTFE  255 (388)
T ss_pred             CHHHHHHHHHHHHHCCCEEEEeccccccccC-CCCcChh-hc-cCCEEEEEechhhcCCchhheeeeecCHH--HHHHHH
Confidence            4   788899999999999999999765331 1111111 11 13444 45889999755 44888887543  222221


Q ss_pred             CCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842          339 TDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG---VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR  415 (499)
Q Consensus       339 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~  415 (499)
                      ....++..                    ....+..+++...+.   ...+++..++..+.++++.+.|++. ++.+...|
T Consensus       256 ~~~~~~~~--------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~p  314 (388)
T PRK07337        256 KLAQNLFI--------------------CASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GFKVPVMP  314 (388)
T ss_pred             HHHHHhcc--------------------CCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-CCccccCC
Confidence            11111100                    011233444444442   2345666667777888888999886 55543234


Q ss_pred             C-ceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC---CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          416 H-FALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG---GLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       416 ~-~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~---g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      . ...+++++....  ...  .....++.+++. +.|..+..+..+.   +..++|++++.   ++++++..+++|.++
T Consensus       315 ~~g~f~~~~~~~~~--~~~--~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~---~~~~l~~~l~rl~~~  386 (388)
T PRK07337        315 DGAFYVYADCRGVA--HPA--AGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT---SMSRLEEAVARLGKL  386 (388)
T ss_pred             CeeEEEEEeccccc--CCC--CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC---CHHHHHHHHHHHHHH
Confidence            3 344555554210  000  001345665544 5565544444342   24689999962   578888888888764

>PRK07550 hypothetical protein; Provisional

Probab=99.84  E-value=4.2e-18  Score=173.15  Aligned_cols=330  Identities=11%  Similarity=0.031  Sum_probs=211.2

Q ss_pred             HHHHHHHHHHHc-ccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          103 AGFLGEMLCACF-NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       103 ~~~~~~~l~~~~-n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      +..+.+.+...+ +.....|...++..++++++.+++.+..|.....     ...++|+|+++|+..++.+...      
T Consensus        44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~------  112 (386)
T PRK07550         44 PPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISP-----EQVHITSGCNQAFWAAMVTLAG------  112 (386)
T ss_pred             CHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCc-----ceEEEecCcHHHHHHHHHHhcC------
Confidence            444555555443 2223345556678999999999999988864221     2468899989888776665532      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                           ++..|+++.++|..+...++..|+   +++.|+.+++.++.+|+++|++.+++.++      +|+.+.++|+||.
T Consensus       113 -----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~l~~~~~~~~~------~v~~~~P~NPtG~  178 (386)
T PRK07550        113 -----AGDEVILPLPWYFNHKMWLDMLGI---RPVYLPCDEGPGLLPDPAAAEALITPRTR------AIALVTPNNPTGV  178 (386)
T ss_pred             -----CCCEEEEcCCCCcchHHHHHhcCC---EEEEEecCCCcCCCCCHHHHHHHhcccCc------EEEEeCCCCCCCc
Confidence                 567799999999888888899999   99999998544578999999999976433      6677789999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCC--CCCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842          262 VDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI--ERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK  335 (499)
Q Consensus       262 id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~--~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~  335 (499)
                      +-+   +++|+++|++||+++++|++|+.+..............  ..-..+..+..|.++.| ..+|+++..+. .+.+
T Consensus       179 ~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~-~~~~  257 (386)
T PRK07550        179 VYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPA-RIAE  257 (386)
T ss_pred             ccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHH-HHHH
Confidence            855   78999999999999999999986532111111111111  11124577899998744 56888877543 2211


Q ss_pred             hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                       +..   +....             +.    ....+..+++...+.  .+..++..++..+.++++.+.|.+.+++.+. 
T Consensus       258 -~~~---~~~~~-------------~~----~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-  315 (386)
T PRK07550        258 -IEK---FMDTV-------------AI----CAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWELL-  315 (386)
T ss_pred             -HHH---HHhhc-------------cc----CCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceeC-
Confidence             111   11000             00    011233333333332  2344555666777888899999887676543 


Q ss_pred             CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      ++....+++++....        ....++.++|. +.|+.+..+..+.  +..++|++++.  .++++++++++.|.++.
T Consensus       316 ~~g~~~~~~~~~~~~--------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~--~~~~~~~~~~~~l~~~~  385 (386)
T PRK07550        316 ASGAYFAYVRHPFPD--------RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFAN--ADVAGIGELVERLRAFA  385 (386)
T ss_pred             CCceEEEEecCCCCC--------CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeec--CCHHHHHHHHHHHHhhC
Confidence            334344444543211        01456777765 4575544433332  24689999963  46899999999998763

>PRK09064 5-aminolevulinate synthase; Validated

Probab=99.84  E-value=2.3e-18  Score=176.32  Aligned_cols=296  Identities=12%  Similarity=0.077  Sum_probs=192.0

Q ss_pred             HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCC
Q 010842          132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVS  211 (499)
Q Consensus       132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g  211 (499)
                      .++.+.+++++|.+..         +++++|++||..++..++..         .++.+|+.....|.++...+...|. 
T Consensus        94 ~~l~~~la~~~g~~~~---------~~~~sG~~an~~ai~~l~~~---------~~~~~i~~~~~~h~s~~~~~~~~~~-  154 (407)
T PRK09064         94 VELERELADLHGKEAA---------LVFTSGYVSNDATLSTLAKL---------IPDCVIFSDELNHASMIEGIRRSRC-  154 (407)
T ss_pred             HHHHHHHHHHhCCCcE---------EEECcHHHHHHHHHHHHhCC---------CCCCEEEEeCcchHHHHHHHHHcCC-
Confidence            3344448888886443         77788899999888776432         0355677777789999888888887 


Q ss_pred             CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhcc
Q 010842          212 PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACI  291 (499)
Q Consensus       212 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~  291 (499)
                        .+..++.       .|+++|++.++...  ...+.+|++..+.+++|.+.|+++|.++|++||++++||+||+.+.+ 
T Consensus       155 --~~~~~~~-------~d~~~le~~l~~~~--~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~-  222 (407)
T PRK09064        155 --EKHIFRH-------NDVAHLEELLAAAD--PDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMY-  222 (407)
T ss_pred             --cEEEECC-------CCHHHHHHHHHhcc--CCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCccccc-
Confidence              6665553       37899998886421  12355788888999999999999999999999999999999973322 


Q ss_pred             Cccchhh--hcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhc-CCccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842          292 CPEFRHY--LNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALS-TDPEYLKNKPSESNSVVDFKDWQVGTGRR  367 (499)
Q Consensus       292 ~~~~~~~--~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr~  367 (499)
                      .+.....  ..++ ...|.++.+.+|.++.+ | |+++.++ +.. +.+. ...+|....                ...+
T Consensus       223 g~~g~g~~~~~~~~~~~div~~t~sKa~g~~-G-G~~~~~~-~~~-~~l~~~~~~~~~t~----------------~~~~  282 (407)
T PRK09064        223 GPRGGGIAERDGLMDRIDIIEGTLAKAFGVM-G-GYIAGSA-ALV-DAVRSYAPGFIFTT----------------SLPP  282 (407)
T ss_pred             CCCCCChHHhcCCCCCCeEEEEecchhhhcc-C-ceEecCH-HHH-HHHHHhCccccccC----------------cCCH
Confidence            1211111  1222 34688888999998754 2 6665543 322 2221 111221110                0111


Q ss_pred             CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH
Q 010842          368 FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN  447 (499)
Q Consensus       368 ~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~  447 (499)
                      ..+..+..++..+...  ....++..++++++.+.|++. +++++. +..+++.+.+..         .....++.++|.
T Consensus       283 ~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~iv~i~~~~---------~~~~~~l~~~L~  349 (407)
T PRK09064        283 AIAAAALASIRHLKES--NEERERHQERAAKLKAALDAA-GIPVMP-NESHIVPVMVGD---------PEKCKKASDMLL  349 (407)
T ss_pred             HHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCCCC-CCCCEEEEEeCC---------HHHHHHHHHHHH
Confidence            1123334444444222  334577888999999999886 777653 445666665532         123466777776


Q ss_pred             hc-CCEEEEeee----ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          448 ST-GRVYLTHTI----VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       448 ~~-g~~~~~~~~----~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ++ |+. +.+..    ..+..++|+++. ..+|++|+++++++|+++.+++
T Consensus       350 ~~~gi~-v~~~~~p~~~~~~~~lRis~~-~~~t~edi~~l~~~l~~~~~~~  398 (407)
T PRK09064        350 EEHGIY-VQPINYPTVPRGTERLRITPT-PFHTDEMIDHLVEALVEVWARL  398 (407)
T ss_pred             HhCCEE-EeeECCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHc
Confidence            54 644 43321    134567999984 8899999999999999988765

>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase

Probab=99.84  E-value=3e-18  Score=174.06  Aligned_cols=326  Identities=14%  Similarity=0.086  Sum_probs=206.6

Q ss_pred             HHHHHHHHHHcc-cCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          104 GFLGEMLCACFN-SVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       104 ~~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      ..+.+.+...+. .....|....+..++.+++.+|+.+.+|.+...    ....++|+|+++++..++.+..+       
T Consensus        45 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~----~~~vi~t~G~~~~l~~~~~~~~~-------  113 (383)
T TIGR03540        45 KHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDP----ETEVLSLIGSKEGIAHIPLAFVN-------  113 (383)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC----CCeEEECCCcHHHHHHHHHHhCC-------
Confidence            344444444432 223456555567889999999999888874221    01246788888888776665422       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|+++.+++..+..+++.+|.   +++.+|++.++++.+|+++|++.+.+++      .+|+++.++||||.+
T Consensus       114 ----~gd~vlv~~P~y~~~~~~~~~~G~---~v~~v~~~~~~g~~~d~~~l~~~~~~~~------~~v~i~~P~NPtG~~  180 (383)
T TIGR03540       114 ----PGDIVLVPDPGYPVYRIGTLFAGG---EPYEMPLKEENGFLPDFDAIPEDIAKKA------KLMFINYPNNPTGAV  180 (383)
T ss_pred             ----CCCEEEEeCCCCcchHHHHHhcCC---EEEEEecCcccCCccCHHHHHhhccccc------eEEEEeCCCCCcCcc
Confidence                567899999999999999999999   9999999865457899999999886543      377788899999999


Q ss_pred             CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842          263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA  336 (499)
Q Consensus       263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~  336 (499)
                      -+   +++|+++|++||+++++|.+|+............  +.+.........+..|.++.| .-+|+++.. ++.. +.
T Consensus       181 ~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~-~~l~-~~  258 (383)
T TIGR03540       181 APLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGN-ADLI-AG  258 (383)
T ss_pred             CCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCC-HHHH-HH
Confidence            76   7899999999999999999997654321111111  111112235567788998755 447887653 3332 22


Q ss_pred             hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842          337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP  414 (499)
Q Consensus       337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~  414 (499)
                      +.....+...                    ....+...++...+  +.+.+++..++..++++.+.+.|++. ++.+..+
T Consensus       259 ~~~~~~~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~  317 (383)
T TIGR03540       259 LGKVKTNVDS--------------------GVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKI-GIDVEKP  317 (383)
T ss_pred             HHHHHHhccc--------------------CCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEecCC
Confidence            2111111000                    00112222222222  34556677777788889999999987 7876644


Q ss_pred             CCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      .....+++++.+.-         ...++.+++. +.|+.+..+..+.  +..++|++++   .+++++++.++.|.+
T Consensus       318 ~~~~~~~~~l~~~~---------~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~---~~~~~l~~~l~~l~~  382 (383)
T TIGR03540       318 KATFYVWVPVPEGY---------TSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLT---VPDERLEEAVARIKK  382 (383)
T ss_pred             CcceEEEEECCCCC---------CHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEec---CCHHHHHHHHHHHhh
Confidence            33333455554210         1355677765 4565444443332  2468999996   356778777777654

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.

>PRK05942 aspartate aminotransferase; Provisional

Probab=99.84  E-value=4e-18  Score=173.69  Aligned_cols=310  Identities=13%  Similarity=0.058  Sum_probs=197.3

Q ss_pred             cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842          119 FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH  198 (499)
Q Consensus       119 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H  198 (499)
                      ..|....+...+++++.+|+.+.+|.+-+.    ....++|+|+++|+..++.+..+           ++..|+++.++|
T Consensus        67 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~----~~~i~vt~G~~~al~~~~~~~~~-----------~gd~Vlv~~P~y  131 (394)
T PRK05942         67 HGYPPFEGTASFRQAITDWYHRRYGVELDP----DSEALPLLGSKEGLTHLALAYVN-----------PGDVVLVPSPAY  131 (394)
T ss_pred             ccCCCCCCCHHHHHHHHHHHHHHHCCCcCC----CCeEEEccChHHHHHHHHHHhCC-----------CCCEEEEcCCCC
Confidence            456555667899999999999888864221    00247789999988877665432           567899999999


Q ss_pred             hhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHh
Q 010842          199 STFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEY  275 (499)
Q Consensus       199 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~  275 (499)
                      ..+...+...|+   +++.||++.+++|.+|+++|++.+.+++      .+|+.+.++||||.+-+   +++|+++|+++
T Consensus       132 ~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~  202 (394)
T PRK05942        132 PAHFRGPLIAGA---QIYPIILKPENDWLIDLSSIPEEVAQQA------KILYFNYPSNPTTATAPREFFEEIVAFARKY  202 (394)
T ss_pred             cchHHHHHHcCC---EEEEeecCCccCCccCHHHHHHhccccc------eEEEEcCCCCCCCCcCCHHHHHHHHHHHHHc
Confidence            999888899999   9999999865568899999999886543      37777889999999976   88999999999


Q ss_pred             CCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCC
Q 010842          276 GIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESN  352 (499)
Q Consensus       276 ~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~  352 (499)
                      |+|+++|++|+.+..........  +.+.......+.+..|.++.| ..+|+++... ... +.+.....+...      
T Consensus       203 ~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~-~l~-~~l~~~~~~~~~------  274 (394)
T PRK05942        203 EIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNR-HII-QGLRTLKTNLDY------  274 (394)
T ss_pred             CeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCH-HHH-HHHHHHHhhccc------
Confidence            99999999997654311111111  111122334456778988644 5589887643 322 332211111000      


Q ss_pred             CcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce-EEEEEecCCCC
Q 010842          353 SVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA-LVCFRLNPYPH  429 (499)
Q Consensus       353 ~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-~v~f~~~~~~~  429 (499)
                                  +  ...+...++...+  ..+.+++..++..++.+++.+.|++. ++++. +|..+ .+++++.+.- 
T Consensus       275 ------------~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~~~~~~f~~~~~~~~~-  337 (394)
T PRK05942        275 ------------G--IFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIP-PTKATMYLWVPCPVGM-  337 (394)
T ss_pred             ------------C--CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCeeeEEEEECCCCC-
Confidence                        0  0112222222222  24556677777778888899999876 67655 45545 3445553211 


Q ss_pred             CCcchhHHHHHHHHHHH-HhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          430 SGSADTEMLNRKLLDWV-NSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       430 ~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                            +  ..++..++ .++|+.+..+..+.  +..++|+++.   .+.+.+.+.++.|.+
T Consensus       338 ------~--~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~---~~~~~l~~~l~~l~~  388 (394)
T PRK05942        338 ------G--STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI---ADCDRLGEALDRLKQ  388 (394)
T ss_pred             ------C--HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec---CCHHHHHHHHHHHHH
Confidence                  0  23344444 45676544444442  3578999995   344555555555544

>PLN02376 1-aminocyclopropane-1-carboxylate synthase

Probab=99.84  E-value=2.9e-18  Score=178.21  Aligned_cols=322  Identities=12%  Similarity=0.073  Sum_probs=208.3

Q ss_pred             cccChhhHHHHHHHHHHHHHHcC----CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC
Q 010842          121 WLASPASTELEIVVMDWLATMLK----LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ  196 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g----~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~  196 (499)
                      |....+..++.+++.+|+.+.+|    ++++       ..++|+|+++|+.+.+.+..+           ++..|+++.+
T Consensus        90 y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe-------~Ivit~Ga~~al~~l~~~l~~-----------pGD~Vlv~~P  151 (496)
T PLN02376         90 FQDYHGLKKFRQAIAHFMGKARGGKVTFDPE-------RVVMSGGATGANETIMFCLAD-----------PGDVFLIPSP  151 (496)
T ss_pred             cCCCCCcHHHHHHHHHHHHHHhCCCCcCChh-------hEEEccchHHHHHHHHHHhCC-----------CCCEEEECCC
Confidence            44445668899999999999887    3343       468999999998877776543           6778999999


Q ss_pred             CchhHHHHHH-HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHH
Q 010842          197 THSTFAKVCK-LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVA  272 (499)
Q Consensus       197 ~H~s~~ka~~-~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia  272 (499)
                      .+..+...+. ..|+   +++.||++.+++|.+|+++|+++++...+.+.++.+|+++.++||||.+-+   +++|+++|
T Consensus       152 ~Y~~~~~~~~~~~G~---~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a  228 (496)
T PLN02376        152 YYAAFDRDLRWRTGV---EIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFV  228 (496)
T ss_pred             CccchHHHHHhhCCC---EEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHH
Confidence            9999998877 4899   999999975556899999999887654444455667888899999999955   67788899


Q ss_pred             HHhCCEEEeeccccchhccCccchhhhcCCC-------CCc--eeEecccccccCC-CcceEEEEeCchhHHHhhcCCcc
Q 010842          273 NEYGIWVHVDAAYAGSACICPEFRHYLNGIE-------RVD--SFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPE  342 (499)
Q Consensus       273 ~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-------~aD--si~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~  342 (499)
                      ++|++++++|.+|+...+..+.+.....-++       ..+  .++.+..|.++.| .-+|+++..++... ........
T Consensus       229 ~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~-~~~~~~~~  307 (496)
T PLN02376        229 TRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVV-SCARKMSS  307 (496)
T ss_pred             HHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHH-HHHHHHhh
Confidence            9999999999999876543222222111111       012  2467999999755 77999988655432 22211111


Q ss_pred             CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHH-HH----HHHHHHHHHHHHHHHHhcCCCeEEEcCCCc
Q 010842          343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNL-QS----HIRSDIRLAKMFEGFVKSDPRFEIVVPRHF  417 (499)
Q Consensus       343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~-~~----~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~  417 (499)
                      +. .                     ...+..+++...+....+ ++    ..++..+..+.+.+.|++. +++.+. +..
T Consensus       308 ~~-~---------------------vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~-~~a  363 (496)
T PLN02376        308 FG-L---------------------VSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACLT-SNA  363 (496)
T ss_pred             cC-C---------------------CCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccC-CCc
Confidence            10 0                     012334444444432222 33    3444556667777888775 676553 444


Q ss_pred             eE-EEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          418 AL-VCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       418 ~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      +. +++.+.+..  .....-+...++.+.+.++ |..+..+..+.  +.+++|+++++  .+++.++..++.|+++..+
T Consensus       364 G~flwi~l~~~~--~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~--~~~~~l~~al~rl~~~l~~  438 (496)
T PLN02376        364 GLFAWMDLRHLL--RDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN--MDDDTLHVALGRIQDFVSK  438 (496)
T ss_pred             eEEEEEEchhhh--ccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC--CCHHHHHHHHHHHHHHHHH
Confidence            34 444443210  0000011124566666665 65444444442  35789999963  4578899999999888754

>PLN03226 serine hydroxymethyltransferase; Provisional

Probab=99.84  E-value=1.6e-18  Score=178.41  Aligned_cols=322  Identities=11%  Similarity=0.024  Sum_probs=199.9

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEc---CCCCch
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYG---SDQTHS  199 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~---s~~~H~  199 (499)
                      ......++|..+.+..+++|+...+.+.    -.+-..+|+.||+.++.+...           ++..|++   +...|.
T Consensus        74 G~~~~d~lE~~~~~~~~~~f~~~~~~~~----~nv~~~SG~~AN~av~~aL~~-----------pgD~Il~~d~~~gGhl  138 (475)
T PLN03226         74 GNEYIDQIETLCQKRALEAFRLDPEKWG----VNVQPLSGSPANFAVYTALLQ-----------PHDRIMGLDLPHGGHL  138 (475)
T ss_pred             CChhHHHHHHHHHHHHHHHhCCCcceeE----EecCcCchHHHHHHHHHHhCC-----------CCCEEEECCCCcCcch
Confidence            3346788899888889999998765310    001247899999988877643           5667776   333444


Q ss_pred             h---HHHHHHHhCCCCCCeE--EeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH
Q 010842          200 T---FAKVCKLAGVSPANIR--ALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE  274 (499)
Q Consensus       200 s---~~ka~~~~G~g~~~v~--~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~  274 (499)
                      +   ....+++.+.+. .+.  ..+++.+ ++.+|+++|++++.+.     +|.+|+++  .+.+|..-|+++|+++|++
T Consensus       139 ~H~~~~~g~~~s~~~~-~~~~~~y~~~~~-~g~iD~d~Le~~l~~~-----~pklIv~~--~S~~s~~~D~a~i~~ia~~  209 (475)
T PLN03226        139 SHGYQTDGKKISATSI-YFESMPYRLDES-TGLIDYDKLEKKAMLF-----RPKLIIAG--ASAYPRDWDYARMRKIADK  209 (475)
T ss_pred             hhhhhhcccccccceE-EEEeeeeeecCC-CCCcCHHHHHHHHhhc-----CCeEEEEe--cCcCCCccCHHHHHHHHHH
Confidence            4   333333333310 111  2334433 3689999999998643     24445443  3458888999999999999


Q ss_pred             hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC-c---cC--CCCCC
Q 010842          275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD-P---EY--LKNKP  348 (499)
Q Consensus       275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~-~---~y--l~~~~  348 (499)
                      +|++++||+||+.+.+..+.....   ++.+|++++++||||.+|.| |++++++.. . ..+... .   .|  ..+..
T Consensus       210 ~ga~LlvD~AH~~Gli~~~~~~~p---~~~~Div~~t~hK~L~GP~G-g~I~~~~~~-~-~~~~~g~~~~~d~~~~i~~a  283 (475)
T PLN03226        210 VGALLMCDMAHISGLVAAQEAASP---FEYCDVVTTTTHKSLRGPRG-GMIFFRKGP-K-PPKGQGEGAVYDYEDKINFA  283 (475)
T ss_pred             cCCEEEEEchhhhCcccCCCCCCC---CCCCeEEEecCcccccCCCc-eEEEEchhh-c-ccccCCCccHHHHHHHhccc
Confidence            999999999998876654322211   23699999999999988987 777776532 1 000000 0   01  00000


Q ss_pred             CCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecC
Q 010842          349 SESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNP  426 (499)
Q Consensus       349 ~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~  426 (499)
                               .....+++-.. ....+.++++.+-..+++++.++..+++++|++.|.+ .|++++.+ ...+++.+.+.+
T Consensus       284 ---------~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~-~G~~l~~~~t~~hi~lv~~~~  353 (475)
T PLN03226        284 ---------VFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMS-KGYKLVTGGTDNHLVLWDLRP  353 (475)
T ss_pred             ---------cCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHh-CCCEEEcCCCCCCEEEEEccC
Confidence                     00112222111 2345566677766667888899999999999999998 59999863 334666666644


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhcCCEEEEeee-E----CCEEEEEEec---cCCCCcHHHHHHHHHHHHHHHHH
Q 010842          427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI-V----GGLYMLRFAV---GASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       427 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~----~g~~~lRi~~---~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      ..      +  ...++.+.|.+.|+..-.... .    -....+|+..   ++...+++|++++.+.|.++.+.
T Consensus       354 ~g------i--~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~  419 (475)
T PLN03226        354 LG------L--TGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTI  419 (475)
T ss_pred             CC------C--CHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence            32      0  123455556666754322110 0    0123488732   35677899999999999888774

>PRK08056 threonine-phosphate decarboxylase; Provisional

Probab=99.84  E-value=4.8e-18  Score=170.68  Aligned_cols=289  Identities=12%  Similarity=0.042  Sum_probs=189.5

Q ss_pred             HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCC
Q 010842          132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVS  211 (499)
Q Consensus       132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g  211 (499)
                      .++++.+++.+|.+++       ..++|+|+++++..++.+. .           ++. +++..+++..+...++..|. 
T Consensus        58 ~~lr~~ia~~~~~~~~-------~i~it~Ga~~~l~~~~~~l-~-----------~g~-viv~~P~y~~~~~~~~~~g~-  116 (356)
T PRK08056         58 RHLHQALARHHQVPAS-------WILAGNGETESIFAVVSGL-K-----------PRR-AMIVTPGFAEYRRALQQVGC-  116 (356)
T ss_pred             HHHHHHHHHHhCcChh-------hEEECCCHHHHHHHHHHHh-C-----------CCC-EEEeCCCcHHHHHHHHHcCC-
Confidence            3455557788888665       4688999888877666543 1           232 34445677788888999999 


Q ss_pred             CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEEeeccccch
Q 010842          212 PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGS  288 (499)
Q Consensus       212 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~  288 (499)
                        +++.+|.++++++.+| +++++.+.+.      +.+|+++.++||||.+-+   +++|+++|+++++++++|++|..+
T Consensus       117 --~~~~v~~~~~~~~~~~-~~~~~~~~~~------~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~  187 (356)
T PRK08056        117 --EIRRYSLREADGWQLT-DAILEALTPD------LDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDF  187 (356)
T ss_pred             --eEEEEecccccCCCcc-HHHHHhccCC------CCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhcc
Confidence              9999998765456777 3444555332      236778999999999987   888999999999999999999765


Q ss_pred             hccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842          289 ACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR  367 (499)
Q Consensus       289 ~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~  367 (499)
                      ..........+... ....++.+.+|+++.| .-+|+++..++..+. .+......                +      .
T Consensus       188 ~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~-~l~~~~~~----------------~------~  243 (356)
T PRK08056        188 IPDETGFIPQLADN-PHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVA-RMRRQQMP----------------W------S  243 (356)
T ss_pred             CCcchHHHHHhccC-CCEEEEEechhhccCcchhheeeecCCHHHHH-HHHHhCCC----------------C------c
Confidence            42111111122222 2457789999999954 668998876544332 22111000                0      0


Q ss_pred             CCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHH
Q 010842          368 FKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWV  446 (499)
Q Consensus       368 ~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l  446 (499)
                      ...+...++...+ +.+..++..++..+.++++.+.|++++++.+. ++..+.+.+++...           ..++.+.|
T Consensus       244 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~-----------~~~~~~~l  311 (356)
T PRK08056        244 INAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVW-PGRANYLFLRCERP-----------DIDLQRAL  311 (356)
T ss_pred             hhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCCCcEEEEEcCCC-----------hHHHHHHH
Confidence            0123334444444 33445566677788889999999988888765 55555555555321           24577778


Q ss_pred             HhcCCEEEEeeeECC--EEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          447 NSTGRVYLTHTIVGG--LYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       447 ~~~g~~~~~~~~~~g--~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      .++|+.+..+..+.+  ..++|+++.    +.++.+.++++|+++.
T Consensus       312 ~~~gI~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~~l~~~~  353 (356)
T PRK08056        312 LTQRILIRSCANYPGLDSRYYRVAIR----SAAENERLLAALRNVL  353 (356)
T ss_pred             HHCCeEEEECCCCCCCCCCEEEEEEc----CHHHHHHHHHHHHHHH
Confidence            788865554444433  358999985    6788999999998763

>PRK08068 transaminase; Reviewed

Probab=99.83  E-value=5.1e-18  Score=172.64  Aligned_cols=322  Identities=12%  Similarity=0.034  Sum_probs=205.9

Q ss_pred             HHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCc-cEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          106 LGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTG-GGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       106 ~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      +.+.+...++.. ...|...++...+.+++.+|+.+.+|.+-+.     . ..++|+|+++++..++.+..+        
T Consensus        50 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~-----~~~i~it~G~~~~l~~~~~~~~~--------  116 (389)
T PRK08068         50 IVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDP-----ETEVAILFGGKAGLVELPQCLMN--------  116 (389)
T ss_pred             HHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CccEEEcCCcHHHHHHHHHHhCC--------
Confidence            455555555432 2346556778899999999998877864221     1 357899998887776554322        


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD  263 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id  263 (499)
                         ++..|+++.++|..+..+++..|+   +++.+|+++++++.+|+++|++.+.+.+      .+|+.+.|+||||.+-
T Consensus       117 ---~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~P~NPTG~~~  184 (389)
T PRK08068        117 ---PGDTILVPDPGYPDYLSGVALARA---QFETMPLIAENNFLPDYTKIPEEVAEKA------KLMYLNYPNNPTGAVA  184 (389)
T ss_pred             ---CCCEEEEcCCCCcchHHHHHhcCC---EEEEeecccccCCCCCHHHHHHhccccc------eEEEEECCCCCCCCcC
Confidence               567789999999999999999999   9999999865458899999999886433      3777788999999996


Q ss_pred             Ch---hHHHHHHHHhCCEEEeeccccchhccCccchhhhc--CCCCCceeEecccccccCC-CcceEEEEeCchhHHHhh
Q 010842          264 NV---EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN--GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKAL  337 (499)
Q Consensus       264 ~l---~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~--g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~  337 (499)
                      +.   ++|+++|++|++++++|.+|+.+............  +...-..++.+..|.++.| .-+|+++. +++.+ +.+
T Consensus       185 s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~l~-~~l  262 (389)
T PRK08068        185 TKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVG-NESVI-EAI  262 (389)
T ss_pred             CHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEec-CHHHH-HHH
Confidence            65   67888999999999999999765332111111111  1111235667889999655 55788875 33322 322


Q ss_pred             cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842          338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR  415 (499)
Q Consensus       338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~  415 (499)
                      .....++..                  +  ..+....++...+  +.+.+++..++..+.++++.+.|++. ++.+. +|
T Consensus       263 ~~~~~~~~~------------------~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-~~  320 (389)
T PRK08068        263 NLLQDHLFV------------------S--LFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREI-GWEVD-AP  320 (389)
T ss_pred             HHHHhhccC------------------C--CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CC
Confidence            211111100                  0  0011122222222  34566777888888889999999887 67654 45


Q ss_pred             CceE-EEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          416 HFAL-VCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       416 ~~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      ..+. +++.+.+..         ...++.+.+.+ .|+.+..+..+.  +..++|++++   .+++.+...++.|.+
T Consensus       321 ~g~~~~~v~~~~~~---------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~al~~l~~  385 (389)
T PRK08068        321 KGSFFAWMPVPKGY---------TSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLL---TDEERLREAVERIGK  385 (389)
T ss_pred             CeeEEEEEECCCCC---------CHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEc---CCHHHHHHHHHHHHH
Confidence            5444 455554311         13567777775 475544433332  3468999996   345667766666654

>PLN03227 serine palmitoyltransferase-like protein; Provisional

Probab=99.83  E-value=1.2e-17  Score=169.30  Aligned_cols=310  Identities=11%  Similarity=0.060  Sum_probs=194.8

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK  203 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k  203 (499)
                      .+...++|++    +++++|.+++         +++++|+.|+..++.+..+           ++..|++++..|.++..
T Consensus        42 ~~~~~~LE~~----lA~~~g~e~a---------l~~~sG~~a~~~~i~~l~~-----------~GD~Vl~~~~~h~s~~~   97 (392)
T PLN03227         42 IDAHLELEQC----MAEFLGTESA---------ILYSDGASTTSSTVAAFAK-----------RGDLLVVDRGVNEALLV   97 (392)
T ss_pred             hHHHHHHHHH----HHHHhCCCcE---------EEecCcHHHHHHHHHHhCC-----------CCCEEEEeccccHHHHH
Confidence            3455566666    8999998754         7888888888866665422           67789999999999999


Q ss_pred             HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHc--------CCccEEEEEecCCCcccccCChhHHHHHHHHh
Q 010842          204 VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEA--------GLVPLFLCATVGTTSTTAVDNVEPLAEVANEY  275 (499)
Q Consensus       204 a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~--------g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~  275 (499)
                      ++.+.+.   +++.++.+       |++++++.++.....        ..++.+|++....+++|.+.|+++|.++|++|
T Consensus        98 ~~~l~~~---~~~~~~~~-------d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~  167 (392)
T PLN03227         98 GVSLSRA---NVRWFRHN-------DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEF  167 (392)
T ss_pred             HHHHcCC---eEEEeCCC-------CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHc
Confidence            8888887   77777643       455666554432211        12345777787888999999999999999999


Q ss_pred             CCEEEeeccccchhccCcc--chhhhcC---CCCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCC
Q 010842          276 GIWVHVDAAYAGSACICPE--FRHYLNG---IERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPS  349 (499)
Q Consensus       276 ~~~lhvD~A~g~~~~~~~~--~~~~~~g---~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~  349 (499)
                      |+++++|++|+.+. ..+.  ......|   ..++|.++.+.+|.++ |. .|++..+. +.. +.+.. ...+.++   
T Consensus       168 g~~livDe~~~~g~-~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-~~-gg~v~~~~-~~~-~~~~~~~~~~~~~---  239 (392)
T PLN03227        168 HYRLILDESFSFGT-LGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-SV-GGMTVGSE-EVV-DHQRLSGSGYCFS---  239 (392)
T ss_pred             CCEEEEECcccccc-cCCCCCcHHHHcCCCCCCCceEEEeechhhhh-cc-CcEEecCH-HHH-HHHHHhCcCcccc---
Confidence            99999999997332 2111  1111112   2357999999999876 32 34444443 222 22211 1111111   


Q ss_pred             CCCCcccCCCcccCCCCCCCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE----------EcCCCce
Q 010842          350 ESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI----------VVPRHFA  418 (499)
Q Consensus       350 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~----------~~~~~~~  418 (499)
                                      -...+..+|+++..+ .....++++++..+++++|++.|++. ++..          ...+..+
T Consensus       240 ----------------~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~~~~~~~~~  302 (392)
T PLN03227        240 ----------------ASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNS-SHPYALKLRNRLVITSDPISP  302 (392)
T ss_pred             ----------------CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCccccccccccccCCCCCCC
Confidence                            111133445554333 21223567888899999999999752 2221          1233456


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee-------eECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT-------IVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-------~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      ++.+.+.+..............++.+++.++|.......       ..-....+|+++ +..+|++||++++++|+++.+
T Consensus       303 i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~-~~~~t~eei~~~~~~l~~~~~  381 (392)
T PLN03227        303 IIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVA-NASHTREDIDKLLTVLGEAVE  381 (392)
T ss_pred             EEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEe-cCCCCHHHHHHHHHHHHHHHH
Confidence            777777442100000001123578888889997543211       112246799999 589999999999999999987


Q ss_pred             HH
Q 010842          492 RL  493 (499)
Q Consensus       492 ~l  493 (499)
                      ++
T Consensus       382 ~~  383 (392)
T PLN03227        382 AI  383 (392)
T ss_pred             HH
Confidence            75

>TIGR01364 serC_1 phosphoserine aminotransferase

Probab=99.83  E-value=5.9e-19  Score=175.64  Aligned_cols=308  Identities=11%  Similarity=0.023  Sum_probs=196.2

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEc-CChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQ-NTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t-~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ++...++-+++++.+++++|.+.+.      ..+++ +|||+|+-.++......        |.+..++..+...|. +.
T Consensus        32 ~~~f~~~~~~~~~~l~~l~~~~~~~------~v~~~~gsgT~a~ea~~~nl~~~--------~~~~l~i~~G~fg~r-~~   96 (349)
T TIGR01364        32 SKEFEAVANEAESDLRELLNIPDNY------EVLFLQGGATGQFAAVPLNLLAE--------GKVADYIVTGAWSKK-AA   96 (349)
T ss_pred             chHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHHHHHHHHhcCCC--------CCeEEEEECCHHHHH-HH
Confidence            3455588888999999999985432      24555 55998877666544211        112334444433343 46


Q ss_pred             HHHHHhCCCCCCeEEeeCCCCCC--CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842          203 KVCKLAGVSPANIRALPTSVDAN--FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH  280 (499)
Q Consensus       203 ka~~~~G~g~~~v~~v~~~~~~~--~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh  280 (499)
                      +.++.+|+    +..+..++.+.  -.+|+++++.  ++      .+.+|.+++..|+||...|     ++++.+++.++
T Consensus        97 ~~a~~~g~----~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~v~~th~ETstGv~~~-----~l~~~~~~l~i  159 (349)
T TIGR01364        97 KEAKKYGV----VNVVASGKEGNYTKIPDPSTWEI--SE------DAAYVHYCANETIHGVEFR-----ELPDVKNAPLV  159 (349)
T ss_pred             HHHHHhCC----cEEEeccccCCCCCCCCHHhcCC--CC------CCCEEEEcCCCCcccEecc-----eecccCCCeEE
Confidence            67777777    33333321110  1456665552  11      2458999999999999876     66777899999


Q ss_pred             eeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCc
Q 010842          281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDW  360 (499)
Q Consensus       281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~  360 (499)
                      ||++.+.+....+-        ...|.+++++||+++ |.|.|+++++++.. .+.-...+.|....       ......
T Consensus       160 VDavss~g~~~id~--------~~~d~~~~ssqK~lg-P~Glg~l~~s~~~~-~~~~~~~~~~~~~~-------~~~~~~  222 (349)
T TIGR01364       160 ADMSSNILSRPIDV--------SKFGLIYAGAQKNIG-PAGLTVVIVRKDLL-GRASRITPSMLNYK-------IHAEND  222 (349)
T ss_pred             EEccccccCccCCH--------HHccEEEEecccccC-CCceEEEEECHHHH-hhcccCCCCcchHH-------HHHhcC
Confidence            99998776554321        125799999999986 88999999988643 12111111221100       000000


Q ss_pred             ccCCCCCC-CcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CC--Cc-eEEEEEecCCCCCCcch
Q 010842          361 QVGTGRRF-KSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PR--HF-ALVCFRLNPYPHSGSAD  434 (499)
Q Consensus       361 ~~~~sr~~-~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~--~~-~~v~f~~~~~~~~~~~~  434 (499)
                      ...++... ....+..+++.+-.+ |++++.++..++++++++.|++++|+.... ++  .. .+++|.+.+.       
T Consensus       223 ~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~-------  295 (349)
T TIGR01364       223 SMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE-------  295 (349)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh-------
Confidence            01111111 234667778888777 799999999999999999999998876553 22  23 4577776542       


Q ss_pred             hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          435 TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       435 ~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                        .+..++.+.+.++|. ++..... ....+|+|++ +++|++|||+++++|+++.++
T Consensus       296 --~~~~~~~~~~~~~Gi-~~~~~~~-~~g~vRvS~~-~~nt~edid~l~~al~~~~~~  348 (349)
T TIGR01364       296 --ELEKRFLKEAEERGL-VSLKGHR-SVGGMRASIY-NAMPLEGVQALVDFMKEFQKK  348 (349)
T ss_pred             --hHhHHHHHHHHHCCC-cccCCcc-ccCeeEEECc-CCCCHHHHHHHHHHHHHHHHh
Confidence              123566677888897 4433221 1247999995 889999999999999987653

This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).

>PRK14807 histidinol-phosphate aminotransferase; Provisional

Probab=99.83  E-value=1.1e-17  Score=167.81  Aligned_cols=288  Identities=14%  Similarity=0.073  Sum_probs=193.6

Q ss_pred             hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH
Q 010842          126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC  205 (499)
Q Consensus       126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~  205 (499)
                      ....++++    ++++++.+.+       ..++|+|+++++..++.+..+           ++..|+++.+++..+...+
T Consensus        60 ~~~~lr~~----ia~~~~~~~~-------~i~it~G~~~~l~~~~~~l~~-----------~gd~Vlv~~p~y~~~~~~~  117 (351)
T PRK14807         60 TAEKLREE----LARYCSVVPT-------NIFVGNGSDEIIHLIMLAFIN-----------KGDVVIYPHPSFAMYSVYS  117 (351)
T ss_pred             cHHHHHHH----HHHHhCCCcc-------cEEEecCHHHHHHHHHHHhcC-----------CCCEEEEeCCChHHHHHHH
Confidence            34455555    6666787654       358888888887776665422           5667888888888888888


Q ss_pred             HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842          206 KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY  285 (499)
Q Consensus       206 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~  285 (499)
                      +..|+   +++.++.++  +|.+|++++++++.+.     ++.+|+++.++|+||.+-+.+++.++|++++.++++|++|
T Consensus       118 ~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~~~-----~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y  187 (351)
T PRK14807        118 KIAGA---VEIPVKLKE--DYTYDVGSFIKVIEKY-----QPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAY  187 (351)
T ss_pred             HHcCC---eEEEeecCC--CCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcc
Confidence            99999   999999874  3689999999988641     1236777899999999999999999999989999999999


Q ss_pred             cchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCC
Q 010842          286 AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGT  364 (499)
Q Consensus       286 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~  364 (499)
                      +.+.  ...........+ -..+..+..|.++.| ..+|+++.. ++ +.+.+......                +    
T Consensus       188 ~~~~--~~~~~~~~~~~~-~vi~~~S~SK~~~~~GlRiG~~v~~-~~-~~~~~~~~~~~----------------~----  242 (351)
T PRK14807        188 FEFY--GNTIVDVINEFE-NLIVLRTLSKAFGLAGLRVGYAVAN-EN-ILKYLNLVKSP----------------Y----  242 (351)
T ss_pred             hhhc--ccchHHHhhhCC-CEEEEecchHhcccchhceeeeecC-HH-HHHHHHHccCC----------------C----
Confidence            7642  111111221111 235667889999744 667887753 33 22333221000                0    


Q ss_pred             CCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHH
Q 010842          365 GRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLD  444 (499)
Q Consensus       365 sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~  444 (499)
                        ....+...++...+....+++.+++..+.++++.+.|++.+++++. ++..+.+.+++..            ...+.+
T Consensus       243 --~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~i~~~~------------~~~~~~  307 (351)
T PRK14807        243 --NINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIKVY-PSKTNFILVKFKD------------ADYVYQ  307 (351)
T ss_pred             --CcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-cCCccEEEEEcCC------------HHHHHH
Confidence              0123444444455444456777777778888899999888888764 5555555555532            356777


Q ss_pred             HHHhcCCEEEEeee-ECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          445 WVNSTGRVYLTHTI-VGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       445 ~l~~~g~~~~~~~~-~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      .+.++|+.+..... .....++|++++    +.++.++++++|+++
T Consensus       308 ~l~~~gV~v~~~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~  349 (351)
T PRK14807        308 GLLERGILVRDFSKVEGLEGALRITVS----SCEANDYLINGLKEL  349 (351)
T ss_pred             HHHHCCEEEEECCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHh
Confidence            77788865433221 123468999996    567889999998775

>TIGR00858 bioF 8-amino-7-oxononanoate synthase

Probab=99.83  E-value=4.1e-18  Score=171.55  Aligned_cols=292  Identities=15%  Similarity=0.101  Sum_probs=188.1

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      .+..++.+.+++++|.+..         +++++|+++++.++.+...           ++.+|+++...|.+...+++..
T Consensus        61 ~~~~~l~~~la~~~~~~~~---------i~~~~G~~~~~~~l~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~  120 (360)
T TIGR00858        61 PLHEELEEELAEWKGTEAA---------LLFSSGYLANVGVISALVG-----------KGDLILSDALNHASLIDGCRLS  120 (360)
T ss_pred             HHHHHHHHHHHHHhCCCCE---------EEECchHHHHHHHHHHhCC-----------CCCEEEEEccccHHHHHHHHhc
Confidence            3344455557787776543         6667778888766554421           4667888999999999999999


Q ss_pred             CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccch
Q 010842          209 GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGS  288 (499)
Q Consensus       209 G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~  288 (499)
                      |+   +++.++.       +|+++|++.+++..  +..+.+|+.....+++|.+.|+++|.++|+++|+++++|++|+.+
T Consensus       121 g~---~~~~~~~-------~d~~~l~~~~~~~~--~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~  188 (360)
T TIGR00858       121 GA---RVRRYRH-------NDVEHLERLLEKNR--GERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTG  188 (360)
T ss_pred             CC---ceEEecC-------CCHHHHHHHHHHcc--cCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECccccc
Confidence            99   8887762       58899999886532  112346777777889999999999999999999999999999754


Q ss_pred             hccCc-cchhhhcCC--CCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCC
Q 010842          289 ACICP-EFRHYLNGI--ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGT  364 (499)
Q Consensus       289 ~~~~~-~~~~~~~g~--~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~  364 (499)
                      .+... .......++  ...|.+..+.+|+++.+ | |+++.+. +.. +.+.. ...+..                 ..
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~-g-G~~~~~~-~~~-~~~~~~~~~~~~-----------------~~  247 (360)
T TIGR00858       189 VLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSY-G-AYVAGSQ-ALI-DYLINRARTLIF-----------------ST  247 (360)
T ss_pred             CcCCCCCchHHhcCCCccCCcEEEEechhhhhcc-C-cEEEcCH-HHH-HHHHHhCcccee-----------------cC
Confidence            32111 000011122  24688889999999864 3 6665543 322 22211 111110                 01


Q ss_pred             CCC-CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHH
Q 010842          365 GRR-FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLL  443 (499)
Q Consensus       365 sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~  443 (499)
                      +.. .....+..+++.+  ...++..++..++++++.+.|++. ++++. ++..+++.+.+..         .....++.
T Consensus       248 ~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~---------~~~~~~~~  314 (360)
T TIGR00858       248 ALPPAVAAAALAALELI--QEEPWRREKLLALIARLRAGLEAL-GFTLM-PSCTPIVPVIIGD---------NASALALA  314 (360)
T ss_pred             CCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHHc-CCccC-CCCCCEEEEEeCC---------HHHHHHHH
Confidence            111 1112223334332  223567788889999999999987 57655 4555667666642         12245688


Q ss_pred             HHHHhcCCEEEEeee---ECCEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          444 DWVNSTGRVYLTHTI---VGGLYMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       444 ~~l~~~g~~~~~~~~---~~g~~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                      ++|.++|+.+.....   ..+..++|+++. ..++++|+++++++|+
T Consensus       315 ~~l~~~gI~v~~~~~~~~~~~~~~iRis~~-~~~~~~~i~~~l~~l~  360 (360)
T TIGR00858       315 EELQQQGIFVGAIRPPTVPAGTSRLRLTLS-AAHTPGDIDRLAEALK  360 (360)
T ss_pred             HHHHHCCeeEeeeCCCCCCCCCceEEEEEc-CCCCHHHHHHHHHhhC
Confidence            888888865433211   134468999995 7789999999998763

This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.

>PLN02450 1-aminocyclopropane-1-carboxylate synthase

Probab=99.83  E-value=6e-18  Score=175.20  Aligned_cols=327  Identities=10%  Similarity=0.044  Sum_probs=212.2

Q ss_pred             cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh
Q 010842          121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST  200 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s  200 (499)
                      |....+...+.+++.+|+.+.+|.+....   ....++|+|+++++...+.+..+           ++..|+++.+.+..
T Consensus        82 Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~---~~~Iiit~Ga~~al~~l~~~l~~-----------pGd~Vlv~~P~Y~~  147 (468)
T PLN02450         82 FQDYHGLPAFKNALAEFMSEIRGNKVTFD---PNKLVLTAGATSANETLMFCLAE-----------PGDAFLLPTPYYPG  147 (468)
T ss_pred             CCCCCChHHHHHHHHHHHHHhhCCCCCcC---hHHeEEccChHHHHHHHHHHhCC-----------CCCEEEECCCCCCc
Confidence            44444667899999999988877431000   01468899999987777665533           67789999999999


Q ss_pred             HHHHHH-HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhC
Q 010842          201 FAKVCK-LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYG  276 (499)
Q Consensus       201 ~~ka~~-~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~  276 (499)
                      +...+. ..|+   +++.||++.+++|.+|+++|++++++..+.+.++.+|+++.++||||.+-+   +++|.++|++|+
T Consensus       148 ~~~~~~~~~g~---~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~  224 (468)
T PLN02450        148 FDRDLKWRTGV---EIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKN  224 (468)
T ss_pred             hHHHHhhcCCc---EEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCC
Confidence            888877 5899   999999875456899999999999876555666777888899999999954   677888899999


Q ss_pred             CEEEeeccccchhccCccchhhhc--------CC--CCCceeEeccccccc-CCCcceEEEEeCchhHHHhhcCCccCCC
Q 010842          277 IWVHVDAAYAGSACICPEFRHYLN--------GI--ERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLLVKALSTDPEYLK  345 (499)
Q Consensus       277 ~~lhvD~A~g~~~~~~~~~~~~~~--------g~--~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l~~~~~~~~~yl~  345 (499)
                      +|+++|.+|+.+.+..+.+...+.        +.  ..--.+..+..|.++ ...-+|+++..++... +.+.....+. 
T Consensus       225 ~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~-~~~~~~~~~~-  302 (468)
T PLN02450        225 IHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVV-SAATKMSSFG-  302 (468)
T ss_pred             cEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHH-HHHHHHhhcC-
Confidence            999999999875442222211111        00  011245678899987 4477899888654322 2222111110 


Q ss_pred             CCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce-E
Q 010842          346 NKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-----LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA-L  419 (499)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-~  419 (499)
                      .                     ...+...++...+..     ..+++..++..+..+.+.+.|++. ++.+. +|..+ .
T Consensus       303 ~---------------------~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~-~~~~g~f  359 (468)
T PLN02450        303 L---------------------VSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCL-KSNAGLF  359 (468)
T ss_pred             C---------------------CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCceEE
Confidence            0                     012333333333322     235666777778888888999887 77654 45555 4


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      +++++...-  ..... ....++.+++.+ .|+.+..+..+.  +.+++|+++++  .+++++++.++.|+++.++..
T Consensus       360 lwi~l~~~~--~~~~~-~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~--~~~~~l~~~l~ri~~~l~~~~  432 (468)
T PLN02450        360 CWVDMRHLL--KSNTF-EAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFAN--MSEETLDLAMKRLKSFVESDS  432 (468)
T ss_pred             EEEEchHhc--CcCCc-hHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecC--CCHHHHHHHHHHHHHHHHhcc
Confidence            444543210  00001 112345666654 575544444443  34689999963  467899999999999887654

>PRK09265 aminotransferase AlaT; Validated

Probab=99.83  E-value=4.7e-18  Score=173.72  Aligned_cols=320  Identities=11%  Similarity=0.009  Sum_probs=200.1

Q ss_pred             cccccChhhHHHHHHHHHHHHHHc--CCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC
Q 010842          119 FNWLASPASTELEIVVMDWLATML--KLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ  196 (499)
Q Consensus       119 ~~~~~~p~~~~lE~~~~~~la~l~--g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~  196 (499)
                      ..|....+...+.+++.+|+.+..  +.+.+       ..++|+|+++++..++.+..+           ++..|+++..
T Consensus        66 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~Vlv~~p  127 (404)
T PRK09265         66 QGYSDSKGLFSARKAIMQYYQQKGIPDVDVD-------DIYIGNGVSELIVMAMQALLN-----------NGDEVLVPAP  127 (404)
T ss_pred             CCCCCCCCcHHHHHHHHHHHhccCCCCCCcc-------cEEEeCChHHHHHHHHHHhCC-----------CCCEEEEeCC
Confidence            456555566788888777775432  33333       468899988888777665422           4667888999


Q ss_pred             CchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHH
Q 010842          197 THSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVAN  273 (499)
Q Consensus       197 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~  273 (499)
                      +|..+..+++..|.   +++.++++.+++|.+|+++|++.+.+++      .+|+.+.++|+||.+-+   +++|+++|+
T Consensus       128 ~y~~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~P~NPtG~~~~~~~~~~i~~~a~  198 (404)
T PRK09265        128 DYPLWTAAVSLSGG---KPVHYLCDEEAGWFPDLDDIRSKITPRT------KAIVIINPNNPTGAVYSKELLEEIVEIAR  198 (404)
T ss_pred             CCcChHHHHHHcCC---EEEEEecccccCCCCCHHHHHHhccccc------eEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence            99999999999998   8998988755558899999999886543      37888899999999977   899999999


Q ss_pred             HhCCEEEeeccccchhccCccchhhhcCCCCCceeE-ecccccccCC-CcceEEEEe-Cchh---HHHhhcCCccCCCCC
Q 010842          274 EYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFS-FSPHKWLLSY-LDCCCLWVK-QPGL---LVKALSTDPEYLKNK  347 (499)
Q Consensus       274 ~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~-~~~hK~l~~p-~~~g~l~~r-~~~~---l~~~~~~~~~yl~~~  347 (499)
                      ++|+++++|.+|+.+............-......++ .+..|.++.| .-+|+++.. ++..   +.+.+... .+... 
T Consensus       199 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~-~~~~~-  276 (404)
T PRK09265        199 QHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDML-ASMRL-  276 (404)
T ss_pred             HCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHH-hcccc-
Confidence            999999999999865432111111111112223444 4568998655 557888864 3321   11111100 00000 


Q ss_pred             CCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-HHHHHHH---HHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEE
Q 010842          348 PSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-LNLQSHI---RSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFR  423 (499)
Q Consensus       348 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~---~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~  423 (499)
                                         ....+...++...++. +.+.+.+   ++..+.++.+.+.|++.+++++..+.....++++
T Consensus       277 -------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~p~~g~~l~~~  337 (404)
T PRK09265        277 -------------------CANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCVKPKGALYAFPK  337 (404)
T ss_pred             -------------------CCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCcccCCCcceEEEEE
Confidence                               0112333444444431 2223322   3555667788888888888776533333344445


Q ss_pred             ecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          424 LNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +.+... .   .....+.+.+.+.+.|..+..+..+.  +..++|+++.   .+++++++.+++|.++.+..
T Consensus       338 ~~~~~~-~---~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~---~~~e~l~~~l~rl~~~l~~~  402 (404)
T PRK09265        338 LDPKVY-P---IHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL---PRVDDLEEAIGRIGRFLSGY  402 (404)
T ss_pred             eccccc-C---CCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeC---CCHHHHHHHHHHHHHHHHHh
Confidence            543100 0   00112345566667786555444442  3468999995   57899999999999877643

>PRK08861 cystathionine gamma-synthase; Provisional

Probab=99.83  E-value=1.9e-18  Score=173.71  Aligned_cols=291  Identities=14%  Similarity=0.136  Sum_probs=194.1

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF  201 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~  201 (499)
                      ...|....+|+.    ++++.|.+.         .++++||++|+..++.+...           ++..|+++...|.+.
T Consensus        50 ~~npt~~~Le~~----lA~leg~e~---------ivvt~gg~~Ai~~~l~all~-----------~Gd~Il~~~~~y~~~  105 (388)
T PRK08861         50 SGNPNRGLLEQT----LSELESGKG---------AVVTNCGTSALNLWVSALLG-----------PDDLIVAPHDCYGGT  105 (388)
T ss_pred             CCCchHHHHHHH----HHHHhCCCe---------EEEECCHHHHHHHHHHHHcC-----------CCCEEEEcCCchHHH
Confidence            345777888888    888888533         59999999998888766532           566788888888765


Q ss_pred             HHHH----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842          202 AKVC----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI  277 (499)
Q Consensus       202 ~ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~  277 (499)
                      ...+    ...|+   +++.++       ..|++++++++.++++      +|++..++|++|.+-|+++|+++|+++|+
T Consensus       106 ~~~~~~~~~~~gi---~v~~vd-------~~d~e~l~~~i~~~tk------lV~lesP~NPtG~v~dl~~I~~la~~~gi  169 (388)
T PRK08861        106 YRLFNTRANKGDF---KVQFVD-------QSDAAALDAALAKKPK------LILLETPSNPLVRVVDIAELCQKAKAVGA  169 (388)
T ss_pred             HHHHHHHHhcCCe---EEEEEC-------CCCHHHHHHhcCcCCe------EEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence            4433    22345   666664       2488999988876543      88899999999999999999999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV  355 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  355 (499)
                      +++||.+|+.+....|    .-.   ++|.++.+.|||+++|.+  .|++..++++...+ +.....+            
T Consensus       170 ~vIvDea~~~~~~~~p----l~~---GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~-~~~~~~~------------  229 (388)
T PRK08861        170 LVAVDNTFLTPVLQKP----LEL---GADFVIHSTTKYINGHSDVIGGVLITKTKEHAEE-LAWWGNC------------  229 (388)
T ss_pred             EEEEECCccccccCCC----ccc---CCCEEEeecceeccCCCcceeEEEEecHHHHHHH-HHHHHhc------------
Confidence            9999999986543222    111   499999999999998866  67776666543221 1110011            


Q ss_pred             cCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cC-----C-----------Cce
Q 010842          356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VP-----R-----------HFA  418 (499)
Q Consensus       356 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~-----~-----------~~~  418 (499)
                              .|........|..++  |.+.+.-++++..++|..+.+.|+++|.++-+ .|     |           ..+
T Consensus       230 --------~G~~~~p~~a~l~~r--gl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg  299 (388)
T PRK08861        230 --------IGATGTPFDSYMTLR--GIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGS  299 (388)
T ss_pred             --------cCCCCChHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCc
Confidence                    122223556676655  45888999999999999999999999988643 22     1           234


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhc------CC---EEEEee-----eE-------CC--EEEEEEeccCCCCc
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNST------GR---VYLTHT-----IV-------GG--LYMLRFAVGASLTD  475 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~---~~~~~~-----~~-------~g--~~~lRi~~~~~~~t  475 (499)
                      +++|.+...        .+...++++.|.--      |.   .+..+.     ..       .|  ...+|+|++     
T Consensus       300 ~~sf~~~~~--------~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvG-----  366 (388)
T PRK08861        300 MLSFEFAGS--------FEQLKVFVKALALFSLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVG-----  366 (388)
T ss_pred             eEEEEeCCC--------HHHHHHHHhcCCcceEccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeC-----
Confidence            788887531        12234455544211      10   010010     00       11  357999996     


Q ss_pred             HHHHHHHHHHHHHHHHHHhc
Q 010842          476 ERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       476 ~~di~~l~~~l~~~~~~l~~  495 (499)
                      -||++.+++.|.+..+.+.+
T Consensus       367 lE~~~dli~Dl~~al~~~~~  386 (388)
T PRK08861        367 LEDAQDLIADLDQAFAKAAE  386 (388)
T ss_pred             cCCHHHHHHHHHHHHHHHHh
Confidence            35677777777777665543

>PRK08636 aspartate aminotransferase; Provisional

Probab=99.83  E-value=1.7e-17  Score=169.53  Aligned_cols=340  Identities=14%  Similarity=0.088  Sum_probs=214.9

Q ss_pred             hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCc-cEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842          102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTG-GGVIQNTTSDSILVTLIAARDRALDA  180 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~A~~~al~~ar~~~~~~  180 (499)
                      ++..+..+.....+.....|....+...+.+++.+|+.+.+|.+...     . ..++|+|+++|+..++.+..+     
T Consensus        48 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~-----~~~I~it~G~~~al~~~~~~l~~-----  117 (403)
T PRK08636         48 PQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDP-----ETEVVATMGSKEGYVHLVQAITN-----  117 (403)
T ss_pred             CHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCeEEECCChHHHHHHHHHHhCC-----
Confidence            34444444443333223456666678899999999999988864321     1 368999999988777766532     


Q ss_pred             hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHc-CCccEEEEEecCCCcc
Q 010842          181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEA-GLVPLFLCATVGTTST  259 (499)
Q Consensus       181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~-g~~p~~vv~t~gtt~~  259 (499)
                            ++..|++++++++.+..++...|.   +++.||++.++++.+|+++|.+.+++..++ ..++.+++.+.++|||
T Consensus       118 ------~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPT  188 (403)
T PRK08636        118 ------PGDVAIVPDPAYPIHSQAFILAGG---NVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPT  188 (403)
T ss_pred             ------CCCEEEEcCCCCcchHHHHHhcCC---EEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCC
Confidence                  577899999999999999999999   999999864445899999876666554332 2345688888899999


Q ss_pred             cccC---ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCC-Cc--eeEecccccccCC-CcceEEEEeCchh
Q 010842          260 TAVD---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIER-VD--SFSFSPHKWLLSY-LDCCCLWVKQPGL  332 (499)
Q Consensus       260 G~id---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~-aD--si~~~~hK~l~~p-~~~g~l~~r~~~~  332 (499)
                      |.+-   .+++|+++|++|++|+++|.+|+.+......... +..+.. .|  ..+.+..|.++.| .-+|+++.. +..
T Consensus       189 G~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~~-~~l  266 (403)
T PRK08636        189 TATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPS-ILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVGN-KKL  266 (403)
T ss_pred             CccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCC-hhcCCCccccEEEEEecccccCCccceeeeeeCC-HHH
Confidence            9994   4688888999999999999999876432111111 111211 12  3356899999644 668887653 332


Q ss_pred             HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010842          333 LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFE  410 (499)
Q Consensus       333 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~  410 (499)
                      . ..+.....+....                .+    .....++...+  ..+.+++..+...+..+.+.+.|++. +++
T Consensus       267 i-~~~~~~~~~~~~~----------------~~----~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~  324 (403)
T PRK08636        267 V-GALKKIKSWLDYG----------------MF----TPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANA-GWE  324 (403)
T ss_pred             H-HHHHHHHHHhccc----------------CC----hHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCc
Confidence            2 2222211111000                00    11111111122  24556666777778888898999886 676


Q ss_pred             EEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          411 IVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       411 ~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                      +..+.....+++++++..  ..    ....++...+. +.|+.+..+..+.  +..++|++++   .+++++++.++.|+
T Consensus       325 ~~~p~~g~~~~~~l~~~~--~~----~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~~~~rl~  395 (403)
T PRK08636        325 LQKPRASMFVWAKIPEPA--RH----LGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI---ENENRIRQAARNIK  395 (403)
T ss_pred             ccCCCcceEEEEECCCcc--CC----CCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec---CCHHHHHHHHHHHH
Confidence            553434445555654311  00    01245555544 4565554444343  2478999995   47889999999998


Q ss_pred             HHHHHH
Q 010842          488 EGADRL  493 (499)
Q Consensus       488 ~~~~~l  493 (499)
                      ++++.+
T Consensus       396 ~~l~~~  401 (403)
T PRK08636        396 KFLKEL  401 (403)
T ss_pred             HHHHhh
Confidence            887663

>TIGR01328 met_gam_lyase methionine gamma-lyase

Probab=99.83  E-value=1.5e-18  Score=175.60  Aligned_cols=289  Identities=18%  Similarity=0.215  Sum_probs=193.1

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-  200 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-  200 (499)
                      ...|...+||+.    +++++|.+..         +++++|+.|+..++.+...           ++..|+++...|.+ 
T Consensus        56 ~~~p~~~~le~~----lA~l~g~~~a---------v~~~sG~~Ai~~~l~al~~-----------~Gd~Vi~~~~~y~~t  111 (391)
T TIGR01328        56 LGNPTVSNLEGR----IAFLEGTEAA---------VATSSGMGAIAATLLTILK-----------AGDHLISDECLYGCT  111 (391)
T ss_pred             CCCchHHHHHHH----HHHHhCCCcE---------EEECCHHHHHHHHHHHHhC-----------CCCEEEEecCcchHH
Confidence            345777788887    9999998654         8999999998877765532           45678888876653 


Q ss_pred             ---HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842          201 ---FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI  277 (499)
Q Consensus       201 ---~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~  277 (499)
                         +...+...|+   .++.++.+       |++++++++.++++      +|++..++|++|.+-|+++|+++|+++|+
T Consensus       112 ~~~~~~~~~~~G~---~~~~vd~~-------d~e~l~~~i~~~tk------lV~le~p~Np~G~v~dl~~I~~la~~~gi  175 (391)
T TIGR01328       112 FALLEHALTKFGI---QVDFINMA-------IPEEVKAHIKDNTK------IVYFETPANPTMKLIDMERVCRDAHSQGV  175 (391)
T ss_pred             HHHHHHHHhcCCe---EEEEECCC-------CHHHHHHhhccCCe------EEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence               4455566787   88888753       78999998876543      78888999999999999999999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV  355 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  355 (499)
                      +++||++|+.+....+    ..   ..+|.++.+++|+++++.+  .|++ +.+++.+.+.......++           
T Consensus       176 ~livD~a~a~~~~~~~----~~---~g~Divv~S~sK~lgg~g~~~gG~v-~~~~~li~~l~~~~~~~~-----------  236 (391)
T TIGR01328       176 KVIVDNTFATPMLTNP----VA---LGVDVVVHSATKYIGGHGDVVAGLI-CGKAELLQQIRMVGIKDM-----------  236 (391)
T ss_pred             EEEEECCCchhccCCc----hh---cCCCEEEccccccccCCCCceEEEE-EcCHHHHHHHHHHHHHhC-----------
Confidence            9999999976533211    11   1489999999999998765  4555 444443322211110000           


Q ss_pred             cCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----------------Cce
Q 010842          356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----------------HFA  418 (499)
Q Consensus       356 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~  418 (499)
                              .+........|+.++.+  +.+..++++..++++++.+.|+++|+++-+.-|                 ..+
T Consensus       237 --------~g~~l~~~~a~l~l~~L--~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~  306 (391)
T TIGR01328       237 --------TGSVISPFDAWLILRGL--KTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGG  306 (391)
T ss_pred             --------CCCCCCcHHHHHHHhCc--CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCc
Confidence                    11223455667776644  677888999999999999999999988644321                 134


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhc------CCE---EEEee-----eE-------CC--EEEEEEeccCCCCc
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNST------GRV---YLTHT-----IV-------GG--LYMLRFAVGASLTD  475 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~~---~~~~~-----~~-------~g--~~~lRi~~~~~~~t  475 (499)
                      +++|.+++.        .+...++.+.|.--      |..   +..+.     .+       .|  .+.+|+|++     
T Consensus       307 ~~s~~~~~~--------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG-----  373 (391)
T TIGR01328       307 MITFELKGG--------FAGAKKLLNNLKLIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVG-----  373 (391)
T ss_pred             eEEEEeCCC--------HHHHHHHHHhCCcceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeC-----
Confidence            788887531        12234555544211      100   00010     00       11  357999996     


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 010842          476 ERHVVAAWELIMEGADR  492 (499)
Q Consensus       476 ~~di~~l~~~l~~~~~~  492 (499)
                      -||++.+++.|.+..+.
T Consensus       374 lE~~~dl~~dl~~al~~  390 (391)
T TIGR01328       374 LEDADDLIADLKQALDA  390 (391)
T ss_pred             cCCHHHHHHHHHHHHhh
Confidence            35788888888877654

This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.

>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed

Probab=99.83  E-value=2.7e-18  Score=174.14  Aligned_cols=234  Identities=16%  Similarity=0.228  Sum_probs=165.8

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|...++|+.    +++++|.+..         +++++|+.|+..++.+...           ++..|+++...|.+..
T Consensus        63 ~~p~~~~Le~~----lA~l~G~~~~---------~~~~sG~~Ai~~~l~~~l~-----------~Gd~Vl~~~~~y~~~~  118 (398)
T PRK07504         63 SNPTVDMFEKR----MCALEGAEDA---------RATASGMAAVTAAILCQVK-----------AGDHVVAARALFGSCR  118 (398)
T ss_pred             CCchHHHHHHH----HHHHhCCCee---------eEecCHHHHHHHHHHHHhC-----------CCCEEEEcCCchhHHH
Confidence            35667777777    8899998765         6688999988766654321           5667888888877644


Q ss_pred             HH----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 KV----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                      ..    +...|+   +++.++       .+|+++++++|+++++      +|+++.++|++|.+-|+++|.++|+++|++
T Consensus       119 ~~~~~~~~~~G~---~v~~vd-------~~d~e~l~~ai~~~tk------lV~lesp~NptG~v~dl~~I~~la~~~gi~  182 (398)
T PRK07504        119 YVVETLLPRYGI---ESTLVD-------GLDLDNWEKAVRPNTK------VFFLESPTNPTLEVIDIAAVAKIANQAGAK  182 (398)
T ss_pred             HHHHHHHhhcCe---EEEEEC-------CCCHHHHHHhcCcCce------EEEEECCCCCCcEecCHHHHHHHHHHcCCE
Confidence            33    345677   777774       3689999999876554      899999999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cc-eEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DC-CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~-g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      ++||++|+.+....+    ...   ++|.++.++||+++++. .. |+++. ++..+.+.+.   .++.           
T Consensus       183 lvvD~a~a~~~~~~~----~~~---gaDivv~S~sK~l~g~g~~~GG~vv~-~~~~i~~~~~---~~~~-----------  240 (398)
T PRK07504        183 LVVDNVFATPLFQKP----LEL---GAHIVVYSATKHIDGQGRCLGGVVLS-DKAWIEEHLQ---DYFR-----------  240 (398)
T ss_pred             EEEECCccccccCCc----hhh---CCCEEEeeccccccCCccceEEEEEe-CcHHHHHHHH---HHHH-----------
Confidence            999999976543211    111   48999999999998763 23 45544 4333322111   0110           


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cC-----CC-----------ceE
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VP-----RH-----------FAL  419 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~-----~~-----------~~~  419 (499)
                            ..+.......+|..++.+  +.+..++++..++++.+.+.|+++|++.-+ .|     |+           .++
T Consensus       241 ------~~g~~~s~~~A~~~l~~L--~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~  312 (398)
T PRK07504        241 ------HTGPSLSPFNAWTLLKGL--ETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTL  312 (398)
T ss_pred             ------HhCCCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccE
Confidence                  112233456677777654  778899999999999999999999987533 22     21           458


Q ss_pred             EEEEecC
Q 010842          420 VCFRLNP  426 (499)
Q Consensus       420 v~f~~~~  426 (499)
                      ++|.+.+
T Consensus       313 ~s~~~~~  319 (398)
T PRK07504        313 VAFELKG  319 (398)
T ss_pred             EEEEeCC
Confidence            8888853

>PRK09276 LL-diaminopimelate aminotransferase; Provisional

Probab=99.83  E-value=3e-18  Score=174.18  Aligned_cols=326  Identities=14%  Similarity=0.077  Sum_probs=206.1

Q ss_pred             HHHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          103 AGFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      +..+.+.+...+... ...|....+...+.+++.+|+.+.+|.+.+.    ....++|+|+++++..++.+..+      
T Consensus        46 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~ii~t~G~~~~i~~~~~~~~~------  115 (385)
T PRK09276         46 PDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDP----ETEVISLIGSKEGIAHIPLAFVN------  115 (385)
T ss_pred             CHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEccCcHHHHHHHHHHhCC------
Confidence            344556666555322 2345544566889999999999888863211    00246788999988777665432      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                           ++..|+++.+++..+...++..|+   +++.+|.+.+.++.+|++++++.+.+++      .+|+.+.++||||.
T Consensus       116 -----~gd~Vl~~~P~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~  181 (385)
T PRK09276        116 -----PGDVVLVPDPGYPVYKIGTIFAGG---EPYFMPLKEENGFLPDLDAIPEDVAKKA------KLMFINYPNNPTGA  181 (385)
T ss_pred             -----CCCEEEEcCCCCcChHHHHHHcCC---EEEEEecCCCCCCcCCHHHHHHhccccc------eEEEEeCCCCCCCC
Confidence                 567788899999999999999999   9999999754447899999988876443      37888889999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842          262 VDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK  335 (499)
Q Consensus       262 id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~  335 (499)
                      +-+   +++|+++|++||+|+++|.+|+.+..........  +.+......+..+..|.++.| .-+|+++..+ ... +
T Consensus       182 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~-~l~-~  259 (385)
T PRK09276        182 VADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNA-DLI-A  259 (385)
T ss_pred             CCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCH-HHH-H
Confidence            966   6888999999999999999998654321111111  111112235567788998755 4478887543 322 2


Q ss_pred             hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                      .+.....++...                    ...+...++...+  ....+++..++..+.++++.+.|++. ++++..
T Consensus       260 ~~~~~~~~~~~~--------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~  318 (385)
T PRK09276        260 GLGKVKSNVDSG--------------------VFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL-GLEVEP  318 (385)
T ss_pred             HHHHHHhhccCC--------------------CCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccC
Confidence            222111111100                    0112223333333  24556677777778888999999887 777653


Q ss_pred             CCCceE-EEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          414 PRHFAL-VCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       414 ~~~~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                       |..+. +++++.+.-         ...++.+++.+ .|..+..+..+.  +..++|++++   .+++++.+.++.|.+
T Consensus       319 -~~~~~~~~v~~~~~~---------~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~---~~~~~l~~~l~~l~~  384 (385)
T PRK09276        319 -PKATFYVWAPVPKGY---------TSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT---VPDERIEEAVERIKK  384 (385)
T ss_pred             -CCcceEEEEECCCCC---------CHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC---CCHHHHHHHHHHHhh
Confidence             43343 455553310         13456676654 575544433332  2468999996   356778777777654

>PRK09147 succinyldiaminopimelate transaminase; Provisional

Probab=99.83  E-value=6.3e-18  Score=172.40  Aligned_cols=328  Identities=14%  Similarity=0.100  Sum_probs=205.8

Q ss_pred             HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      +..+.+.+...++ ....|....+..++.+.+.+|+.+.+|++ -+.    ....++|+|+++|+..++.+..+.     
T Consensus        44 ~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~----~~~i~it~G~~~al~~~~~~l~~~-----  113 (396)
T PRK09147         44 PAFIKDALAANLD-GLASYPTTAGLPALREAIAAWLERRYGLPALDP----ATQVLPVNGSREALFAFAQTVIDR-----  113 (396)
T ss_pred             CHHHHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCc----cceEEECCChHHHHHHHHHHHcCC-----
Confidence            3445555555444 23456666677889999999999988864 110    003578899999887777655321     


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                         |..+..|+++.+++..+..+++.+|+   +++.||++++++|.+|+++|++.+.+++      .+++.+.++||||.
T Consensus       114 ---~~~gd~vlv~~P~y~~~~~~~~~~g~---~~~~vp~~~~~~~~~d~~~l~~~~~~~~------k~i~l~nP~NPTG~  181 (396)
T PRK09147        114 ---DGPGPLVVCPNPFYQIYEGAALLAGA---EPYFLNCDPANNFAPDFDAVPAEVWART------QLLFVCSPGNPTGA  181 (396)
T ss_pred             ---CCCCCEEEEcCCCccchHHHHHhcCC---EEEEeccCccccCccCHHHHHHHHhhcc------EEEEEcCCCCCcCc
Confidence               01266788899999999999999999   9999999865568999999998876543      36777899999999


Q ss_pred             c---CChhHHHHHHHHhCCEEEeeccccchhccCc-cchhhhc---CC--CCCc--eeEecccccccCC-CcceEEEEeC
Q 010842          262 V---DNVEPLAEVANEYGIWVHVDAAYAGSACICP-EFRHYLN---GI--ERVD--SFSFSPHKWLLSY-LDCCCLWVKQ  329 (499)
Q Consensus       262 i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~-~~~~~~~---g~--~~aD--si~~~~hK~l~~p-~~~g~l~~r~  329 (499)
                      +   +.+++|+++|++|++|+++|.+|+.+.+..+ .......   ..  ...+  .+..+..|.++.| ..+|+++..+
T Consensus       182 ~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~  261 (396)
T PRK09147        182 VLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGDA  261 (396)
T ss_pred             cCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCCH
Confidence            9   4678888899999999999999987643211 0000010   01  0112  6677899965444 6788877643


Q ss_pred             chhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010842          330 PGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPR  408 (499)
Q Consensus       330 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~  408 (499)
                       ... +.+.....+...                    ....+...+++..+. .+.+++..+...+.++.+.+.|++.  
T Consensus       262 -~l~-~~~~~~~~~~~~--------------------~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~--  317 (396)
T PRK09147        262 -ALL-KKFLLYRTYHGC--------------------AMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV--  317 (396)
T ss_pred             -HHH-HHHHHHhhhccc--------------------CCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh--
Confidence             322 222211111100                    011222333333332 3445666666677777777777763  


Q ss_pred             eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--------CEEEEEEeccCCCCcHHHH
Q 010842          409 FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--------GLYMLRFAVGASLTDERHV  479 (499)
Q Consensus       409 ~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--------g~~~lRi~~~~~~~t~~di  479 (499)
                      +.+..+.....+.+++. ..          ..++.+++. +.|..+..+..+.        +..++|++++   .+++++
T Consensus       318 ~~~~~p~~g~f~~~~~~-~~----------~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~---~~~~~l  383 (396)
T PRK09147        318 LDVQLPDAGFYLWAKVP-GD----------DTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALV---APLAEC  383 (396)
T ss_pred             cCCCCCCeeEEEEEECC-CC----------HHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEec---CCHHHH
Confidence            33333334444445543 11          245666665 4576554443331        2468999997   357789


Q ss_pred             HHHHHHHHHHH
Q 010842          480 VAAWELIMEGA  490 (499)
Q Consensus       480 ~~l~~~l~~~~  490 (499)
                      ++.+++|.++.
T Consensus       384 ~~~l~rl~~~~  394 (396)
T PRK09147        384 VEAAERIVDFC  394 (396)
T ss_pred             HHHHHHHHHHh
Confidence            99998888764

>PRK06767 methionine gamma-lyase; Provisional

Probab=99.83  E-value=1.4e-18  Score=175.78  Aligned_cols=287  Identities=13%  Similarity=0.108  Sum_probs=191.4

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|...++|+.    +++++|.+..         +++++|+.|+..++.+...           ++..|+++...|....
T Consensus        59 ~~pt~~~Le~~----lA~l~G~~~a---------l~~~sG~~Ai~~~l~al~~-----------~Gd~Vv~~~~~y~~~~  114 (386)
T PRK06767         59 GNPTVKLFEER----MAVLEGGEEA---------LAFGSGMAAISATLIGFLK-----------AGDHIICSNGLYGCTY  114 (386)
T ss_pred             CCcchHHHHHH----HHHHhCCCcE---------EEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCcHHHHH
Confidence            55777788887    8999997543         8888999887776655432           5667888888877655


Q ss_pred             HHHHH----hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 KVCKL----AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 ka~~~----~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                      ..+..    .|+   ++..++       ..|+++++++++++++      +|++..++|++|.+.|+++|+++|+++|++
T Consensus       115 ~~~~~~~~~~gi---~~~~~~-------~~d~~~l~~~i~~~tk------lV~lesp~NptG~v~dl~~I~~la~~~g~~  178 (386)
T PRK06767        115 GFLEVLEEKFMI---THSFCD-------METEADIENKIRPNTK------LIFVETPINPTMKLIDLKQVIRVAKRNGLL  178 (386)
T ss_pred             HHHHHHHhhcCe---EEEEeC-------CCCHHHHHHhhCcCce------EEEEeCCCCCCceecCHHHHHHHHHHcCCE
Confidence            54433    344   454443       2478999998876443      788899999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      +++|++|+......|    +.   .++|.++.+.+|+++++..  .|+++.+++. +.+........+            
T Consensus       179 vivD~a~a~~~~~~p----l~---~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~-i~~~~~~~~~~~------------  238 (386)
T PRK06767        179 VIVDNTFCSPYLQRP----LE---LGCDAVVHSATKYIGGHGDVVAGVTICKTRA-LAEKIRPMRKDI------------  238 (386)
T ss_pred             EEEECCCcccccCCc----hh---cCCcEEEecCcceecCCCCceeEEEEeChHH-HHHHHHHHHHHh------------
Confidence            999999975432211    11   2489999999999988755  5777766542 222111100000            


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----------CceEEEEEec
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----------HFALVCFRLN  425 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------~~~~v~f~~~  425 (499)
                              +-....+..|+.++.+  +.+..++++..++++++.+.|+++|+++.+.-|           ..++++|.+.
T Consensus       239 --------g~~~~~~~a~l~~~~L--~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~  308 (386)
T PRK06767        239 --------GGIMAPFDAWLLLRGL--KTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIK  308 (386)
T ss_pred             --------CCCCCHHHHHHHHcCC--CcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEc
Confidence                    0011345566665544  566788899999999999999999999865422           2468899885


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHhcCCEE--------EE-ee-----eE-------C--CEEEEEEeccCCCCcHHHHHHH
Q 010842          426 PYPHSGSADTEMLNRKLLDWVNSTGRVY--------LT-HT-----IV-------G--GLYMLRFAVGASLTDERHVVAA  482 (499)
Q Consensus       426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~--------~~-~~-----~~-------~--g~~~lRi~~~~~~~t~~di~~l  482 (499)
                      ..        .....++.++|...+...        +. +.     ..       .  ..+.+|+|++     -||++.+
T Consensus       309 ~~--------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svG-----lE~~~dl  375 (386)
T PRK06767        309 GG--------KEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVG-----LESWEDI  375 (386)
T ss_pred             CC--------HHHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEec-----cCCHHHH
Confidence            32        223456666664433111        00 10     00       0  1357999996     3567777


Q ss_pred             HHHHHHHHHH
Q 010842          483 WELIMEGADR  492 (499)
Q Consensus       483 ~~~l~~~~~~  492 (499)
                      ++.|.+..+.
T Consensus       376 ~~dl~~al~~  385 (386)
T PRK06767        376 VSDLEQALKK  385 (386)
T ss_pred             HHHHHHHHhh
Confidence            8877776653

>PRK05968 hypothetical protein; Provisional

Probab=99.83  E-value=1.8e-18  Score=174.95  Aligned_cols=246  Identities=17%  Similarity=0.184  Sum_probs=171.5

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH--
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF--  201 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~--  201 (499)
                      .|...++|+.    +++++|.+..         +++++|+.|+..++.+...           ++..|+++...|.+.  
T Consensus        62 ~p~~~~le~~----lA~l~g~~~a---------v~~~sG~~Ai~~al~al~~-----------~Gd~Vl~~~~~y~~t~~  117 (389)
T PRK05968         62 NPTVRAFEEM----LAKLEGAEDA---------RGFASGMAAISSTVLSFVE-----------PGDRIVAVRHVYPDAFR  117 (389)
T ss_pred             ChhHHHHHHH----HHHHhCCCcE---------EEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHHH
Confidence            4566677777    8999998754         7778889888877765421           566788888887753  


Q ss_pred             --HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842          202 --AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV  279 (499)
Q Consensus       202 --~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l  279 (499)
                        .+.+...|+   +++.++.+       |++++++++ ++++      +|++..++++++.+.|+++|+++|+++|+++
T Consensus       118 ~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i-~~tk------lV~ie~pt~~~~~~~dl~~i~~la~~~gi~v  180 (389)
T PRK05968        118 LFETILKRMGV---EVDYVDGR-------DEEAVAKAL-PGAK------LLYLESPTSWVFELQDVAALAALAKRHGVVT  180 (389)
T ss_pred             HHHHHHHHcCc---eEEEeCCC-------CHHHHHHhc-ccCC------EEEEECCCCCCCcHHHHHHHHHHHHHcCCEE
Confidence              356677888   88888642       889999887 3332      6778889999999999999999999999999


Q ss_pred             EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842          280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF  357 (499)
Q Consensus       280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  357 (499)
                      +||++|+.+....|    ...   ++|.++.+.+|++++|.+  .|+++ .+++.+.+.......++.            
T Consensus       181 ivD~a~a~~~~~~p----~~~---g~Divv~S~tK~l~g~~~~~gG~i~-~~~~~~~~l~~~~~~~~g------------  240 (389)
T PRK05968        181 MIDNSWASPVFQRP----ITL---GVDLVIHSASKYLGGHSDTVAGVVA-GSKEHIARINAEAYPYLG------------  240 (389)
T ss_pred             EEECCCcchhccCc----hhc---CCcEEEeeccccccCCCCeEEEEEE-ECHHHHHHHHHHHHHhCC------------
Confidence            99999976543211    112   379999999999998855  56655 444333222111111111            


Q ss_pred             CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC------------CceEEEEEec
Q 010842          358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR------------HFALVCFRLN  425 (499)
Q Consensus       358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~------------~~~~v~f~~~  425 (499)
                              -.......|..++.+  +.+..++++..++++++.+.|+++|+++.+..|            ..++++|.+.
T Consensus       241 --------~~~~~~~A~~~l~~L--~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~  310 (389)
T PRK05968        241 --------AKLSPFEAWLLLRGL--RTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFR  310 (389)
T ss_pred             --------CCCChHHHHHHHccc--CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEEC
Confidence                    112345566665544  678899999999999999999999998766433            1358888886


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHhc
Q 010842          426 PYPHSGSADTEMLNRKLLDWVNST  449 (499)
Q Consensus       426 ~~~~~~~~~~~~~~~~l~~~l~~~  449 (499)
                      + +        ....++.++|...
T Consensus       311 ~-~--------~~~~~f~~~L~~~  325 (389)
T PRK05968        311 E-G--------IDVRAFADALKLF  325 (389)
T ss_pred             C-H--------HHHHHHHHhCCcc
Confidence            3 1        1245677766543

>PRK06358 threonine-phosphate decarboxylase; Provisional

Probab=99.83  E-value=1.3e-17  Score=167.34  Aligned_cols=291  Identities=12%  Similarity=0.074  Sum_probs=195.0

Q ss_pred             hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842          125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka  204 (499)
                      +...++.++    +++.++.+.+       ..++|+|+++++..++.+. .           + ..|++..+++..+..+
T Consensus        54 ~~~~~lr~~----ia~~~~~~~~-------~i~it~Ga~~~l~~~~~~~-~-----------~-~~v~i~~P~y~~~~~~  109 (354)
T PRK06358         54 PDYLELRKR----IASFEQLDLE-------NVILGNGATELIFNIVKVT-K-----------P-KKVLILAPTFAEYERA  109 (354)
T ss_pred             ccHHHHHHH----HHHHhCCChh-------hEEECCCHHHHHHHHHHHh-C-----------C-CcEEEecCChHHHHHH
Confidence            334455555    6666677654       4689999999887666543 1           2 2477788899999999


Q ss_pred             HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEEe
Q 010842          205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVHV  281 (499)
Q Consensus       205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lhv  281 (499)
                      ++..|+   +++.+|++.+++|.+| +++.+.+.+.      +.+|+.+.++||||.+-+   +++|.++|++|++|+++
T Consensus       110 ~~~~g~---~~~~~~~~~~~~~~~d-~~~~~~~~~~------~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~  179 (354)
T PRK06358        110 LKAFDA---EIEYAELTEETNFAAN-EIVLEEIKEE------IDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLII  179 (354)
T ss_pred             HHHcCC---eeEEEeCccccCCCcc-HHHHHhhccC------CCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEE
Confidence            999999   9999999865568899 6665555332      336778899999999965   78888899999999999


Q ss_pred             eccccchhccCccchhhhcCCCCCc--eeEeccccccc-CCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842          282 DAAYAGSACICPEFRHYLNGIERVD--SFSFSPHKWLL-SYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK  358 (499)
Q Consensus       282 D~A~g~~~~~~~~~~~~~~g~~~aD--si~~~~hK~l~-~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  358 (499)
                      |.+|..+.... .....+..+...+  .+..+..|.++ ...-+|+++..++............+               
T Consensus       180 De~Y~~~~~~~-~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~~---------------  243 (354)
T PRK06358        180 DEAFMDFLEEN-ETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREPW---------------  243 (354)
T ss_pred             eCcccccCCCc-cchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCC---------------
Confidence            99997654321 1111111121112  45678899998 44678998775543221111111100               


Q ss_pred             CcccCCCCCCCcHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHH
Q 010842          359 DWQVGTGRRFKSLRLWMVLRSYGV-LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEM  437 (499)
Q Consensus       359 ~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~  437 (499)
                              ....+..+++...+.. +.+++..+...+.++.+.+.|++.+++++. +|..+.+++++.+           
T Consensus       244 --------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~g~f~~~~~~~-----------  303 (354)
T PRK06358        244 --------SINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVY-KPSVNFIFFKLEK-----------  303 (354)
T ss_pred             --------cchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCcceEEEEEcCc-----------
Confidence                    0123444555555543 334677777788889999999988887765 4565655555532           


Q ss_pred             HHHHHHHHHHhcCCEEEEeeeECC--EEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          438 LNRKLLDWVNSTGRVYLTHTIVGG--LYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       438 ~~~~l~~~l~~~g~~~~~~~~~~g--~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                       ..++.++|.++|+.+..+..+.+  ..++|+++.    +.++.++++++|+++.
T Consensus       304 -~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~~----~~~~~~~l~~~l~~~~  353 (354)
T PRK06358        304 -PIDLRKELLKKGILIRSCSNYRGLDENYYRVAVK----SREDNKKLLKALEVIL  353 (354)
T ss_pred             -hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence             24677788888866555555533  468999985    7889999999998764

>PLN02955 8-amino-7-oxononanoate synthase

Probab=99.83  E-value=1.1e-17  Score=168.92  Aligned_cols=306  Identities=12%  Similarity=0.056  Sum_probs=198.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHH--HhHhhhhc-cCCeEEEcCCCCchhHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRA--LDAVGAEN-MHKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~--~~~~~~~g-~~~~~i~~s~~~H~s~~ka  204 (499)
                      +.+..++.+.|++++|.+..         +++++|..||+.++.+.....  ....+... .++..|+.....|.|+..+
T Consensus       146 ~~~h~~LE~~LA~f~g~e~a---------ll~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG  216 (476)
T PLN02955        146 TTYHRLLESSLADLKKKEDC---------LVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDG  216 (476)
T ss_pred             hHHHHHHHHHHHHHHCCCcE---------EEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHH
Confidence            33444445559999998876         999999999998887642110  00000000 1456788899999999999


Q ss_pred             HHHhCC-CCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeec
Q 010842          205 CKLAGV-SPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDA  283 (499)
Q Consensus       205 ~~~~G~-g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~  283 (499)
                      +++... |..+++.++       .-|+++|++.|+....   ...+|++....++.|.+-|+++|.++|++||++++||.
T Consensus       217 ~~ls~~~~~a~~~~f~-------HND~~~Le~~L~~~~~---~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDE  286 (476)
T PLN02955        217 VRLAERQGNVEVFVYR-------HCDMYHLNSLLSSCKM---KRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDD  286 (476)
T ss_pred             HHhccccCCceEEEeC-------CCCHHHHHHHHHhCCC---CceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcc
Confidence            998732 001566655       3499999999976432   23456677778899999999999999999999999999


Q ss_pred             cccchhccCccchhhh--cCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhh-cCCccCCCCCCCCCCCcccCCC
Q 010842          284 AYAGSACICPEFRHYL--NGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL-STDPEYLKNKPSESNSVVDFKD  359 (499)
Q Consensus       284 A~g~~~~~~~~~~~~~--~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~  359 (499)
                      ||+.+.+ .+..+...  .++ ...|.++.+.-|.++..  .|+++.++ ... +.+ .....|++....          
T Consensus       287 AH~~Gv~-G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~--GGfi~gs~-~~~-~~l~~~~~~~ifStal----------  351 (476)
T PLN02955        287 AHGTFVC-GENGGGVAEEFNCEADVDLCVGTLSKAAGCH--GGFIACSK-KWK-QLIQSRGRSFIFSTAI----------  351 (476)
T ss_pred             cccCcee-cCCCCcHHHHhCCCCCCcEEEEeCccchhcc--CceeecHH-HHH-HHHHHhCCCCeecccc----------
Confidence            9987644 22222221  222 35889999999998754  45565554 222 333 233444443210          


Q ss_pred             cccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHH
Q 010842          360 WQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLN  439 (499)
Q Consensus       360 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~  439 (499)
                            ....+.....++..+-.+  ..+.++..++.++|++.+    |+.+    .++++.+.+..         +...
T Consensus       352 ------pp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~~----G~~~----~sPI~pI~ig~---------~~~a  406 (476)
T PLN02955        352 ------PVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKALS----GVDI----SSPIISLVVGN---------QEKA  406 (476)
T ss_pred             ------cHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhc----CCCC----CCCEEEEEeCC---------HHHH
Confidence                  000111222333333111  235567778888888742    4432    35777766644         3446


Q ss_pred             HHHHHHHHhcCCEEE---EeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          440 RKLLDWVNSTGRVYL---THTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       440 ~~l~~~l~~~g~~~~---~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ..+.++|.++|..+.   .|+...+...+|++++ ..+|++||++++++|.++....
T Consensus       407 ~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~ls-A~Ht~edId~lv~~L~~~~~~~  462 (476)
T PLN02955        407 LKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLS-AAHTTEDVKKLITALSSCLDFD  462 (476)
T ss_pred             HHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeC-CCCCHHHHHHHHHHHHHHHhhh
Confidence            678889999997543   2445567778999994 8899999999999999886654

>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]

Probab=99.83  E-value=1.4e-17  Score=160.21  Aligned_cols=376  Identities=16%  Similarity=0.098  Sum_probs=252.2

Q ss_pred             hhHHHhcCCCCC-CCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHH-HHHH-----HHcccCCccccc
Q 010842           51 PGFLRSALPDSA-PHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLG-EMLC-----ACFNSVGFNWLA  123 (499)
Q Consensus        51 ~~~l~~~~~~~~-p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~l~-----~~~n~~~~~~~~  123 (499)
                      |.+++...+..+ +..+.++.+++.++.+...+|.   ..+.|.|.-..+...|+++- .++.     .+|.+++...++
T Consensus        40 P~~Ir~~~~~~~~~~~~~sE~e~l~~l~~ia~kN~---~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQ  116 (450)
T COG0403          40 PPSIRKKLDTLLPLPKPLSEYEALAELKEIASKNK---VFTSFIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQ  116 (450)
T ss_pred             CHHHHhcccccCCCCCCCCHHHHHHHHHHHHhcCc---hhhhhccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhh
Confidence            556665421111 1245699999999999887776   56778886656666666666 4442     125567777778


Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK  203 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k  203 (499)
                      +.....||.+.+  +++|+|++-.       +..+..++|.+- .|+..++...       +.++-.++++...|+....
T Consensus       117 GrLqaLfefQtl--v~dLTGm~VA-------NASm~DeaTAaA-EAm~ma~r~~-------k~k~~~~~V~~~vhpqt~~  179 (450)
T COG0403         117 GRLEALFEFQTL--VADLTGLDVA-------NASMLDEATAAA-EAMLMAKRVT-------KKKRNKFLVPKDVHPQTLD  179 (450)
T ss_pred             HHHHHHHHHHHH--HHHHhCCCcc-------cchhhhhHHHHH-HHHHHHHHhh-------cCcCceEEecCCCCHHHHH
Confidence            888888999855  9999999875       457888888443 3333333221       1134579999999999777


Q ss_pred             HHHHh--CCCCCCeEEeeCCCCCCCccCHHHHHHHHHH-HHHcCCccEEEEEecCCCccc-ccCChhHHHHHHHHhCCEE
Q 010842          204 VCKLA--GVSPANIRALPTSVDANFSLSPQLLRRAVEA-DVEAGLVPLFLCATVGTTSTT-AVDNVEPLAEVANEYGIWV  279 (499)
Q Consensus       204 a~~~~--G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~-~~~~g~~p~~vv~t~gtt~~G-~id~l~~I~~ia~~~~~~l  279 (499)
                      ..+..  |+|. +++.++.+       |.++|++. .+ +      .+.|++..|++ +| .+.++.+|.+.+|++|..+
T Consensus       180 Vl~Tra~~~g~-~i~~~~~~-------d~~~l~~~-~~~~------~~gv~vQyP~~-~G~~~~d~~~l~~~~h~~~al~  243 (450)
T COG0403         180 VLRTRAEGLGI-EIEVVDAD-------DLDDLESA-DDGD------VFGVLVQYPNT-FGIVEEDLRALIEAAHSAGALV  243 (450)
T ss_pred             HHHhhcccCce-EEEEeccc-------hhhhhhhc-cccC------eEEEEEecCCC-CCccchhHHHHHHHHhhcCCEE
Confidence            76532  3311 66666543       77888877 32 3      36888999886 67 7778999999999999988


Q ss_pred             EeeccccchhccCccchhhhcCCCCCceeEecccccc----cCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842          280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWL----LSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV  355 (499)
Q Consensus       280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l----~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  355 (499)
                      +|=+---...++-|.      |--+||.++.+.+.++    ++.+-+|++.+|++-     ....|+.|.+...+..+.+
T Consensus       244 ~v~aDplaL~LL~pP------Ge~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~-----~R~mPGRlVG~S~D~~G~~  312 (450)
T COG0403         244 IVAADPLALGLLKPP------GEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEF-----KRQMPGRLVGVSVDAAGKR  312 (450)
T ss_pred             EEEechhHhhccCCc------cccCCceEEecCcccCCCcCCCCcceeeeeEhHhH-----hhcCCCceeeeeecCCCCc
Confidence            764321111122221      2224999999999876    222348999998753     4567888887766655554


Q ss_pred             cCCCcccC----CCCCCC------------cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcCCCce
Q 010842          356 DFKDWQVG----TGRRFK------------SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVPRHFA  418 (499)
Q Consensus       356 ~~~~~~~~----~sr~~~------------al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~~~  418 (499)
                      .|. .++|    .-||-.            |+...+.+..+|.+|++++.++..+++.++++.|++.. +++++.+..+.
T Consensus       313 A~r-LaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~fFd  391 (450)
T COG0403         313 AFR-LALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDHFFD  391 (450)
T ss_pred             hhh-hhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEecccccee
Confidence            443 1122    234432            22333345557999999999999999999999999664 68888777788


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      .+++++..          ..+..+.++....|.-+   ..+... .+-+++. ..+|++||+.+++++...
T Consensus       392 t~~v~~~~----------~~~~~l~~~~~~~G~~L---~~~~~~-~~~ia~t-Et~t~~~i~~l~~~~~~~  447 (450)
T COG0403         392 TFTVRVPE----------EVAEALLAAAIAGGINL---RRVDAD-TVLIALT-ETTTKEDIDALVAAFGGV  447 (450)
T ss_pred             eEEEecch----------hHHHHHHHHHHhcCCce---eeecCC-ceEEEee-cccCHHHHHHHHHHHhhh
Confidence            88888753          23667777777777422   112221 4667774 889999999999998764

>PRK10534 L-threonine aldolase; Provisional

Probab=99.82  E-value=1.2e-18  Score=173.59  Aligned_cols=311  Identities=14%  Similarity=0.076  Sum_probs=188.4

Q ss_pred             hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      +|..+..+ .... .+...|...|...++|++    +++++|.++.         ++++||+++++.++.+...      
T Consensus        13 ~~~~~~a~-~~~~-~~~~~Y~~~~~~~~L~~~----la~~~g~~~~---------~v~~~g~~a~~~~l~~~~~------   71 (333)
T PRK10534         13 SRAMLEAM-MAAP-VGDDVYGDDPTVNALQDY----AAELSGKEAA---------LFLPTGTQANLVALLSHCE------   71 (333)
T ss_pred             CHHHHHHH-Hhcc-CCCcccCCCHHHHHHHHH----HHHHhCCCeE---------EEeCchHHHHHHHHHHhcC------
Confidence            34444443 3322 223345567888888888    7888898764         8889999999888876532      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHH--HHHhC-CCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKV--CKLAG-VSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS  258 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka--~~~~G-~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~  258 (499)
                           ++..|+++...|.+...+  +..+| .   .++.++++.  +|.+|+++|++++.++...+..+.+|+.+.  ++
T Consensus        72 -----~gd~vi~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~lv~l~n--p~  139 (333)
T PRK10534         72 -----RGEEYIVGQAAHNYLYEAGGAAVLGSI---QPQPIDAAA--DGTLPLDKVAAKIKPDDIHFARTRLLSLEN--TH  139 (333)
T ss_pred             -----CCCeeEEechhhhhHhcCCchHHhcCc---eEEeecCCC--CCCCCHHHHHHhhcccCcCcccceEEEEec--CC
Confidence                 455677777777543332  34444 5   677777664  479999999999865311111233555553  44


Q ss_pred             ccccCChhH---HHHHHHHhCCEEEeeccccchhcc--CccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhH
Q 010842          259 TTAVDNVEP---LAEVANEYGIWVHVDAAYAGSACI--CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLL  333 (499)
Q Consensus       259 ~G~id~l~~---I~~ia~~~~~~lhvD~A~g~~~~~--~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l  333 (499)
                      +|.+.|.++   |+++|++|++|+++|+||......  ........   ...|.++++++|.++.+  .|..++.+++..
T Consensus       140 ~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~---~~~~~~~~s~SK~~~~~--~G~~~~~~~~~i  214 (333)
T PRK10534        140 NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEIT---QYCDSFTICLSKGLGTP--VGSLLVGNRDYI  214 (333)
T ss_pred             CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHH---hcCCEEEEEeEcCCCCc--ccceEEcCHHHH
Confidence            699977655   567889999999999997522110  11111111   12576777899988876  564444455443


Q ss_pred             HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          334 VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       334 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                      .........+ .                  .+-...++.+.+++..+  +...+.+++..+.++++.+.|++. |+++. 
T Consensus       215 ~~~~~~~~~~-~------------------~~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-  271 (333)
T PRK10534        215 KRARRWRKMT-G------------------GGMRQAGILAAAGLYAL--KHNVARLQEDHDNAAWLAEQLREA-GADVM-  271 (333)
T ss_pred             HHHHHHHHHh-C------------------CchhhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHhC-CCccC-
Confidence            2221111100 0                  00001122233333333  222345555666778999999987 78765 


Q ss_pred             CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      +|..+.+.+++.+.          ...++.+.|.++|+.+ .+.     ..+|++. +..+|++++++++++|+++.
T Consensus       272 ~~~~nfv~~~~~~~----------~~~~~~~~l~~~gi~v-~~~-----~~~rl~~-~~r~t~e~~~~~~~~l~~~~  331 (333)
T PRK10534        272 RQDTNMLFVRVGEE----------QAAALGEYMRERNVLI-NAS-----PIVRLVT-HLDVSREQLAEVVAHWRAFL  331 (333)
T ss_pred             CCCceEEEEECCch----------hHHHHHHHHHHcCeee-cCC-----ceEEEEE-EeCCCHHHHHHHHHHHHHHh
Confidence            45677777766431          1356677788888654 332     2489988 47789999999999998664

>PRK07366 succinyldiaminopimelate transaminase; Validated

Probab=99.82  E-value=7.9e-18  Score=171.26  Aligned_cols=327  Identities=13%  Similarity=0.024  Sum_probs=208.3

Q ss_pred             HHHHHHHHHcc-cCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCc-cEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          105 FLGEMLCACFN-SVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTG-GGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       105 ~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      .+.+.+...+. .....|...++...+.+++.+|+.+..|.+-+.     . ..++|+|+++|+..++.+..+       
T Consensus        47 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~~I~it~Gs~~al~~~~~~l~~-------  114 (388)
T PRK07366         47 HALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDP-----ETEVLPLIGSQEGTAHLPLAVLN-------  114 (388)
T ss_pred             HHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCC-----cCeEEECCCcHHHHHHHHHHhCC-------
Confidence            34444444443 223456666778899999999999888863221     1 257788999988777665432       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|++..++++.+...++..|+   +++.||+++++.|.+|++++++.+.+.+      .+|+.+.++||||.+
T Consensus       115 ----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~i~l~~p~NPTG~~  181 (388)
T PRK07366        115 ----PGDFALLLDPGYPSHAGGVYLAGG---QIYPMPLRAENDFLPVFADIPTEVLAQA------RLMVLSYPHNPTTAI  181 (388)
T ss_pred             ----CCCEEEEcCCCCcchHHHHHhcCC---EEEEEECCCccCCCCCHHHHHHhhcccc------eEEEEeCCCCCCCcc
Confidence                567788899999999999999999   9999999866668899999988775433      367778899999999


Q ss_pred             C---ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCC-Cc--eeEecccccccCC-CcceEEEEeCchhHHH
Q 010842          263 D---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIER-VD--SFSFSPHKWLLSY-LDCCCLWVKQPGLLVK  335 (499)
Q Consensus       263 d---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~-aD--si~~~~hK~l~~p-~~~g~l~~r~~~~l~~  335 (499)
                      -   .+++|+++|++||+|+++|.+|+-+.+........+..+.. .+  .++.+..|.++.| .-+|+++.. +..+ +
T Consensus       182 ~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~-~~li-~  259 (388)
T PRK07366        182 APLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGN-AQLI-Q  259 (388)
T ss_pred             CCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCC-HHHH-H
Confidence            4   46777889999999999999998764321110111111111 12  4567899999655 668887753 3322 2


Q ss_pred             hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                      .+.....+...                  +.  .......++..+  ..+.+++..++..+.++++.+.|++. ++....
T Consensus       260 ~l~~~~~~~~~------------------~~--~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~~  318 (388)
T PRK07366        260 ALRQVKAVVDF------------------NQ--YRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI-GWPVPL  318 (388)
T ss_pred             HHHHHHhhccc------------------CC--CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccC
Confidence            22111111000                  00  011111222222  24567777778888888899999887 665443


Q ss_pred             CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      +.....+++++.+.-       +....++.+.+. +.|+.+..+..+.  +..++|++++   .+++++++.++.|.++
T Consensus       319 p~~g~f~~~~~~~~~-------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~~l~rl~~~  387 (388)
T PRK07366        319 PEATMYVWAKLPEPW-------QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALV---HDPDILEEAVERIAAF  387 (388)
T ss_pred             CCeeEEEEEECCccc-------CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEec---CCHHHHHHHHHHHHHh
Confidence            444445555554310       001245666664 4576555444443  2468999996   3588899999988764

>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.82  E-value=3.6e-18  Score=174.19  Aligned_cols=242  Identities=13%  Similarity=0.138  Sum_probs=163.0

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF  201 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~  201 (499)
                      ...|...++|+.    ++++.|.+..         ++|++||+|+.+++.+...           ++..|+++...|.+.
T Consensus        61 ~~~p~~~~le~~----lA~l~g~~~a---------v~~sSGt~Al~~al~~ll~-----------~Gd~Vi~~~~~y~~t  116 (433)
T PRK08134         61 ISNPTVAVLEER----VAALEGGVGA---------IATASGQAALHLAIATLMG-----------AGSHIVASSALYGGS  116 (433)
T ss_pred             CcChHHHHHHHH----HHHHhCCCcE---------EEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCccHHH
Confidence            346777888887    8899987653         9999999999888776521           466788898888776


Q ss_pred             HHHH----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842          202 AKVC----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI  277 (499)
Q Consensus       202 ~ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~  277 (499)
                      ...+    ...|+   ++++++++       |+++|+++|+++++      +|++.+++|++|.+.|+++|+++|+++|+
T Consensus       117 ~~~~~~~l~~~Gi---~v~~vd~~-------d~~~l~~~i~~~Tk------lV~~e~~~np~g~v~Di~~I~~la~~~gi  180 (433)
T PRK08134        117 HNLLHYTLRRFGI---ETTFVKPG-------DIDGWRAAIRPNTR------LLFGETLGNPGLEVLDIPTVAAIAHEAGV  180 (433)
T ss_pred             HHHHHHHHhhCCe---EEEEECCC-------CHHHHHHhcCCCCe------EEEEECCCcccCcccCHHHHHHHHHHcCC
Confidence            5544    44688   88888763       78999999987665      78888899999999999999999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc-ceEEEEeCch-hHHH--hh-cCCccCCCCCCCCCC
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-CCCLWVKQPG-LLVK--AL-STDPEYLKNKPSESN  352 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~r~~~-~l~~--~~-~~~~~yl~~~~~~~~  352 (499)
                      +++||++++.+....|    ..   -++|.++++.|||++.+.. .|.+++.... .+..  .+ ...+.+.........
T Consensus       181 ~livD~t~a~~~~~~p----l~---~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  253 (433)
T PRK08134        181 PLLVDSTFTTPYLLRP----FE---HGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFA  253 (433)
T ss_pred             EEEEECCCcccccCCc----hh---cCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchh
Confidence            9999999977654322    11   1499999999999987743 4445443221 1000  00 000111000000000


Q ss_pred             CcccCCC--------cccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          353 SVVDFKD--------WQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       353 ~~~~~~~--------~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                      .......        .....+........|..++  |.+.+..++++..++|..+.+.|+++|.++-+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~--gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V  319 (433)
T PRK08134        254 EESTVAAFLLRARREGLRDFGACLSPMNAWQLLQ--GIETLPLRMERHVANTRKVVAFLASHPAVARV  319 (433)
T ss_pred             hccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence            0000000        0011222334556665554  45889999999999999999999999987543

>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue

Probab=99.82  E-value=1.6e-18  Score=174.93  Aligned_cols=314  Identities=16%  Similarity=0.147  Sum_probs=211.4

Q ss_pred             CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC
Q 010842          118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT  197 (499)
Q Consensus       118 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~  197 (499)
                      ...|....+...+++++.+|+.+-.|.+.+.     ...+++++|+.+++..+......         .++..|+++.+.
T Consensus        37 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~~i~~~~G~~~~~~~~~~~~~~---------~~~~~vlv~~P~  102 (363)
T PF00155_consen   37 FLGYPPPQGYPELREAIADFLGRRYGVPVDP-----EANILVTSGAQAALFLLLRLLKI---------NPGDTVLVPDPC  102 (363)
T ss_dssp             CTSSTCTTHHHHHHHHHHHHHHHHHTHHTTG-----GEGEEEESHHHHHHHHHHHHHHS---------STTSEEEEEESS
T ss_pred             cccCCCchhhHHHHHHHHHHhhhccCccccc-----ceEEEEecccccchhhhhhcccc---------cccccceecCCc
Confidence            4567777788999999888888666664331     11366666666655555444320         146678899999


Q ss_pred             chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHH
Q 010842          198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANE  274 (499)
Q Consensus       198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~  274 (499)
                      |..+...++..|+   .++.+|++..+++.+|+++|++.+++...++..+.+|+.+.++||||..-+   +++|+++|++
T Consensus       103 y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~  179 (363)
T PF00155_consen  103 YPSYIEAARLLGA---EVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELARE  179 (363)
T ss_dssp             STHHHHHHHHTTS---EEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHH
T ss_pred             cccccccccccCc---eeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcc
Confidence            9999999999999   999999775556899999999999886554434567888999999999855   4555556999


Q ss_pred             hCCEEEeeccccchhccCccchhhhcCCC-CC-ceeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCC
Q 010842          275 YGIWVHVDAAYAGSACICPEFRHYLNGIE-RV-DSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSE  350 (499)
Q Consensus       275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-~a-Dsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~  350 (499)
                      ||+++++|.+|+.+....+........+. .. ..++.+..|.++.| ...|++++ ++... +.+.. ...+..     
T Consensus       180 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~-~~~~~-~~l~~~~~~~~~-----  252 (363)
T PF00155_consen  180 YNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVA-PPELI-ERLRRFQRSGLS-----  252 (363)
T ss_dssp             TTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEE-EHHHH-HHHHHHHHHTTS-----
T ss_pred             cccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccc-hhhhh-hhhhhccccccc-----
Confidence            99999999999887554322211111111 12 37788899998766 45788888 43322 22211 111111     


Q ss_pred             CCCcccCCCcccCCCCCCCcHHHHHHHHHh---c--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEec
Q 010842          351 SNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---G--VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLN  425 (499)
Q Consensus       351 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~  425 (499)
                                        ......+....+   +  .+.+++..++..++++++.+.|++. ++.+..++ .+.+++...
T Consensus       253 ------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~-~~~~~~~~~  312 (363)
T PF00155_consen  253 ------------------SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPE-AGFFLWVRL  312 (363)
T ss_dssp             ------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHS-BSSEEEEEE
T ss_pred             ------------------cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeecc-CccEEEEEc
Confidence                              122222222222   2  1267888888899999999999888 89988555 455555433


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842          426 PYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI  486 (499)
Q Consensus       426 ~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l  486 (499)
                      +.        . ...++.++|.++ |+.+..+..+....++|+++  ...+++++++++++|
T Consensus       313 ~~--------~-~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~--a~~~~e~~~~~~~~l  363 (363)
T PF00155_consen  313 DP--------N-DAEELAQELLEEYGILVRPGSYFGVPGYIRISL--ASHSEEDLEEALERL  363 (363)
T ss_dssp             SH--------H-HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG--GCSCHHHHHHHHHHH
T ss_pred             cc--------c-hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe--ccCCHHHHHHHHhhC
Confidence            21        1 356788888887 86655544444467899999  347899999999876

On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....

>PRK07683 aminotransferase A; Validated

Probab=99.82  E-value=8.3e-18  Score=170.86  Aligned_cols=328  Identities=11%  Similarity=0.064  Sum_probs=212.7

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ..+.+.+...+..+...|...++...+++++.+|+.+..|.+.+.    ....++|+|+++|+..++.+...        
T Consensus        44 ~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~----~~~I~~t~G~~~al~~~~~~l~~--------  111 (387)
T PRK07683         44 SHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSP----ESEIIVTIGASEAIDIAFRTILE--------  111 (387)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhCC--------
Confidence            445566666665444566666778999999999998877763221    01468999999998877765432        


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-  262 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-  262 (499)
                         ++..|+++..++..+..+++.+|+   +++.+|.+.+ ++.+|++++++.+.+++      .+|+++.++|+||.+ 
T Consensus       112 ---~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~~~~~~------~~i~i~~p~NPtG~~~  178 (387)
T PRK07683        112 ---PGTEVILPAPIYPGYEPIIRLCGA---KPVFIDTRST-GFRLTAEALENAITEKT------RCVVLPYPSNPTGVTL  178 (387)
T ss_pred             ---CCCEEEEcCCCccchHHHHHHcCC---EEEEeecCcc-cCCCCHHHHHHhcCcCc------eEEEEeCCCCCCCcCC
Confidence               456788899988889999999999   9999998765 48889999999886543      367888999999998 


Q ss_pred             --CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhc--CCCCCceeEecccccccCC-CcceEEEEeCchhHHHhh
Q 010842          263 --DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN--GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKAL  337 (499)
Q Consensus       263 --d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~--g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~  337 (499)
                        +++++|+++|+++|+++++|++|+.+... +.......  +...-..+..+..|.++.| .-+|++..... .. +.+
T Consensus       179 s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~-l~-~~~  255 (387)
T PRK07683        179 SKEELQDIADVLKDKNIFVLSDEIYSELVYE-QPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSY-LA-KHI  255 (387)
T ss_pred             CHHHHHHHHHHHHHcCeEEEEecccccceeC-CCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHH-HH-HHH
Confidence              45889999999999999999999876432 11111111  1112245678889999855 45788876542 22 222


Q ss_pred             cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842          338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR  415 (499)
Q Consensus       338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~  415 (499)
                      .....|...                 +   ...+...++...+  |...+++..++..+.++++.+.|.+. ++.+. ++
T Consensus       256 ~~~~~~~~~-----------------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~  313 (387)
T PRK07683        256 LKVHQYNVT-----------------C---ASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-GLDVE-KP  313 (387)
T ss_pred             HHHHHhccC-----------------C---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-CC
Confidence            211111111                 0   0112222222222  44556666777778888899999876 66644 45


Q ss_pred             CceEEEEEecCC-CCCCcchhHHHHHHHHHH-HHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          416 HFALVCFRLNPY-PHSGSADTEMLNRKLLDW-VNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       416 ~~~~v~f~~~~~-~~~~~~~~~~~~~~l~~~-l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      ..+.+.+...+. .      .+  ..++... +.+.|+.+..+..+.  +..++|++++   .+++++.+.+++|.++.+
T Consensus       314 ~~~~~~~~~~~~~~------~~--~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~---~~~~~~~~al~~l~~~l~  382 (387)
T PRK07683        314 TGAFYLFPSIGHFT------MS--SFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYA---YSIETLKEGLDRLEAFLQ  382 (387)
T ss_pred             CeeEEEEEecccCC------CC--HHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHH
Confidence            545544432221 1      00  2334444 345676544444332  2478999996   368889999999988765


Q ss_pred             H
Q 010842          492 R  492 (499)
Q Consensus       492 ~  492 (499)
                      +
T Consensus       383 ~  383 (387)
T PRK07683        383 Q  383 (387)
T ss_pred             h
Confidence            3

>cd00617 Tnase_like Tryptophanase family (Tnase)

Probab=99.82  E-value=5.2e-18  Score=171.94  Aligned_cols=324  Identities=15%  Similarity=0.107  Sum_probs=199.7

Q ss_pred             CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC
Q 010842          117 VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ  196 (499)
Q Consensus       117 ~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~  196 (499)
                      ....|..+++..+||++    +++++|.+.         .++|+|||+|+..++.+..+           ++.+| ++..
T Consensus        45 gd~~Y~~~~g~~~Leea----ia~~~g~~~---------vv~t~~Gt~Al~la~~al~~-----------pGD~V-~~~~   99 (431)
T cd00617          45 GDEAYAGSKSFYDLEDA----VQDLFGFKH---------IIPTHQGRGAENILFSILLK-----------PGRTV-PSNM   99 (431)
T ss_pred             CCCccCCCCCHHHHHHH----HHHHHCCCe---------EEEcCCHHHHHHHHHHHhCC-----------CCCEE-ccCC
Confidence            33568889999999999    677778764         39999999999988876532           45566 4554


Q ss_pred             CchhHHHHHHHhCCCCCCeEEeeCCCCC--------CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc-cccC---C
Q 010842          197 THSTFAKVCKLAGVSPANIRALPTSVDA--------NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST-TAVD---N  264 (499)
Q Consensus       197 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~--------~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~-G~id---~  264 (499)
                      .+.+....+.+.|.   .++.+++++..        .+.+|+++|+++|++...  .++.+|+++.++|++ |.+-   +
T Consensus       100 ~f~~~~~~i~~~Ga---~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~--~~~~~I~v~~p~N~~gG~~~s~~~  174 (431)
T cd00617         100 HFDTTRGHIEANGA---VPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGA--ENIPYIVLTITNNTAGGQPVSMAN  174 (431)
T ss_pred             cccchHHHHHhCCC---EeEEEecccccccccccCCCCCcCHHHHHHHhCcccC--CCccEEEEECCcCCCCCccCCHHH
Confidence            44566677888999   99999997532        245999999999986411  123478888899987 7774   5


Q ss_pred             hhHHHHHHHHhCCEEEeeccccch-hccC----ccchh-----hh-cCCCCCceeEecccccccCCCcceEEEEeCchhH
Q 010842          265 VEPLAEVANEYGIWVHVDAAYAGS-ACIC----PEFRH-----YL-NGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLL  333 (499)
Q Consensus       265 l~~I~~ia~~~~~~lhvD~A~g~~-~~~~----~~~~~-----~~-~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l  333 (499)
                      +++|+++|++||+|+|.|+|+... +.+.    +.+..     .. .-...+|++++++||.+.+|. .|+++.++++..
T Consensus       175 l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~-GG~i~~~d~~l~  253 (431)
T cd00617         175 LREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNI-GGFLALRDDELY  253 (431)
T ss_pred             HHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCcc-ceEEEeCcHHHH
Confidence            678899999999999999996432 1111    11111     10 012359999999999998875 567777776444


Q ss_pred             HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHH--HHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010842          334 VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNL--QSHIRSDIRLAKMFEGFVKSDPRFEI  411 (499)
Q Consensus       334 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~--~~~~~~~~~~a~~l~~~L~~~~~~~~  411 (499)
                      .+.....  .....         +..+   ++-..+   ...++ ..|.+..  .+.+++..+.++++.+.|++. |+.+
T Consensus       254 ~~~~~~~--~~~~~---------~~~~---gG~~~r---~~~A~-A~gL~e~~~~~~l~~~~~~r~~l~~~L~~~-G~~v  314 (431)
T cd00617         254 EEARQRV--VLYEG---------FVTY---GGMAGR---DMEAL-AQGLREAVEEDYLRHRVEQVRYLGDRLDEA-GVPI  314 (431)
T ss_pred             HHHHHhc--cccCC---------cccc---ccccHH---HHHHH-HHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCCc
Confidence            3322111  00000         0000   111111   11222 1121111  345666667779999999987 8887


Q ss_pred             EcCCCceEEEEEecCCCC-CCcchhHHHHHHHHHHHHh-cCCEEEEeeeE-------CC------EEEEEEeccCCCCcH
Q 010842          412 VVPRHFALVCFRLNPYPH-SGSADTEMLNRKLLDWVNS-TGRVYLTHTIV-------GG------LYMLRFAVGASLTDE  476 (499)
Q Consensus       412 ~~~~~~~~v~f~~~~~~~-~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~-------~g------~~~lRi~~~~~~~t~  476 (499)
                      +.|...+.+.+....... ....+  .....+..+|.+ .|+..+.-+.+       .+      -..+|+++--..-|.
T Consensus       315 ~~P~Ggh~v~~d~~~~~~~~~~~~--~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~  392 (431)
T cd00617         315 VEPAGGHAVFIDAREFLPHIPQEQ--FPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQ  392 (431)
T ss_pred             cCCCcceEEEEEhHHhcCCCCccc--CcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCH
Confidence            755555455544432100 00000  113455544443 45443321110       11      257999985445599


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010842          477 RHVVAAWELIMEGADR  492 (499)
Q Consensus       477 ~di~~l~~~l~~~~~~  492 (499)
                      +++|.+.++|..+.++
T Consensus       393 ~~~~~~~~~~~~~~~~  408 (431)
T cd00617         393 DHMDYVAAAVIALYER  408 (431)
T ss_pred             HHHHHHHHHHHHHHhh
Confidence            9999999999998765

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.

>PRK06836 aspartate aminotransferase; Provisional

Probab=99.82  E-value=2.9e-17  Score=167.31  Aligned_cols=329  Identities=14%  Similarity=0.064  Sum_probs=207.9

Q ss_pred             hHHHHHHHHHHHcccC---CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHH
Q 010842          102 TAGFLGEMLCACFNSV---GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRAL  178 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~  178 (499)
                      ++..+.+.+...++..   ...|....+...+.+.+.+++.+..+..-..     ...++|+|+++++..++.....   
T Consensus        47 ~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~-----~~i~~t~G~~~al~~~~~~l~~---  118 (394)
T PRK06836         47 PPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTA-----DHIVMTCGAAGALNVALKAILN---  118 (394)
T ss_pred             CCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCc-----CcEEEeCChHHHHHHHHHHhcC---
Confidence            3455666666555422   3445555677888888888888776552110     1468999999988777665422   


Q ss_pred             hHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc
Q 010842          179 DAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS  258 (499)
Q Consensus       179 ~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~  258 (499)
                              ++..|+++..++..+...++..|+   +++.+|++++ ++.+|+++|++++++++      .+|+++.++|+
T Consensus       119 --------~gd~Vli~~p~~~~~~~~~~~~g~---~v~~v~~~~~-~~~~d~~~l~~~~~~~~------~~v~~~~p~NP  180 (394)
T PRK06836        119 --------PGDEVIVFAPYFVEYRFYVDNHGG---KLVVVPTDTD-TFQPDLDALEAAITPKT------KAVIINSPNNP  180 (394)
T ss_pred             --------CCCEEEEcCCCCccHHHHHHHcCC---EEEEEecCCc-cCcCCHHHHHhhcCcCc------eEEEEeCCCCC
Confidence                    466788899999999999999999   9999999865 37899999999986543      36788889999


Q ss_pred             ccccCC---hhHHHHHHHH------hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEe
Q 010842          259 TTAVDN---VEPLAEVANE------YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVK  328 (499)
Q Consensus       259 ~G~id~---l~~I~~ia~~------~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r  328 (499)
                      ||.+-|   +++|+++|++      ||+|+++|.+|..+..............+ -..+..+..|.++.| ..+|+++..
T Consensus       181 tG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~-~~i~~~S~SK~~~~pGlRiG~~~~~  259 (394)
T PRK06836        181 TGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYYD-NSIVVYSFSKSLSLPGERIGYIAVN  259 (394)
T ss_pred             CCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHccC-cEEEEecchhhccCcceeeEEEecC
Confidence            999966   6777778888      89999999999875432111111111221 246778899999855 568898875


Q ss_pred             Cchh----HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh
Q 010842          329 QPGL----LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVK  404 (499)
Q Consensus       329 ~~~~----l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~  404 (499)
                      +...    +...+.....+..                   ......+...+....+.. +.  ..++..+.++.+.+.|+
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~q~~~~~~l~~-~~--~~~~~~~~r~~l~~~L~  317 (394)
T PRK06836        260 PEMEDADDLVAALVFANRILG-------------------FVNAPALMQRVVAKCLDA-TV--DVSIYKRNRDLLYDGLT  317 (394)
T ss_pred             HHHhhhHHHHHHHHHHhhccc-------------------cccCCHHHHHHHHHHhCC-hH--HHHHHHHHHHHHHHHHH
Confidence            4321    0111100000000                   000012222333333322 11  23445566777888888


Q ss_pred             cCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHH
Q 010842          405 SDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWE  484 (499)
Q Consensus       405 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~  484 (499)
                      +. ++++..+.....++.++....          ..++.+.+.+.|..+..+..+....++|++++   .++++++..++
T Consensus       318 ~~-g~~~~~~~gg~~~~~~~~~~~----------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~---~~~~~~~~~i~  383 (394)
T PRK06836        318 EL-GFECVKPQGAFYLFPKSPEED----------DVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC---VDTETIERSLP  383 (394)
T ss_pred             hC-CCEeecCCceEEEEEeCCCCC----------HHHHHHHHHhCCEEEECchhcCCCCeEEEEec---CCHHHHHHHHH
Confidence            77 677653333233333443211          34556667777866555444444468999996   47899999999


Q ss_pred             HHHHHHHHH
Q 010842          485 LIMEGADRL  493 (499)
Q Consensus       485 ~l~~~~~~l  493 (499)
                      .|+++.++.
T Consensus       384 ~l~~~l~~~  392 (394)
T PRK06836        384 AFEKLAKEY  392 (394)
T ss_pred             HHHHHHHHh
Confidence            999887653

>PRK05387 histidinol-phosphate aminotransferase; Provisional

Probab=99.82  E-value=1.3e-17  Score=167.56  Aligned_cols=285  Identities=14%  Similarity=0.074  Sum_probs=191.6

Q ss_pred             HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCC
Q 010842          133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSP  212 (499)
Q Consensus       133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~  212 (499)
                      ++++.++++++.+.+       ..++|+|+++++..++.+..+           ++..|+++.++|..+...++..|+  
T Consensus        64 ~lr~aia~~~~~~~~-------~I~it~G~~~al~~~~~~l~~-----------~gd~vlv~~P~y~~~~~~~~~~g~--  123 (353)
T PRK05387         64 ALRQAIAAYYGLDPE-------QVFVGNGSDEVLAHAFLAFFN-----------HDRPLLFPDITYSFYPVYAGLYGI--  123 (353)
T ss_pred             HHHHHHHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEeCCCHHHHHHHHHHcCC--
Confidence            344557777787654       469999999998888776643           567788899999888888999999  


Q ss_pred             CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh-CCEEEeeccccchhcc
Q 010842          213 ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY-GIWVHVDAAYAGSACI  291 (499)
Q Consensus       213 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~-~~~lhvD~A~g~~~~~  291 (499)
                       +++.+|.++  +|.+|+++|++    .+      .+|+.+.++||||.+-+.+++.++++.+ ++++++|.+|+.+.  
T Consensus       124 -~~~~v~~~~--~~~~d~~~l~~----~~------~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~--  188 (353)
T PRK05387        124 -PYEEIPLDD--DFSIDVEDYLR----PN------GGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFG--  188 (353)
T ss_pred             -EEEEeecCC--CCCCCHHHHHh----cC------CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccC--
Confidence             999999875  36899999873    11      2678889999999999999999999886 99999999996432  


Q ss_pred             CccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCc
Q 010842          292 CPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKS  370 (499)
Q Consensus       292 ~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a  370 (499)
                      ........... .-..++.+..|.++.| ..+|+++.. ++.. +.+.........             +      ....
T Consensus       189 ~~~~~~~~~~~-~~~i~~~S~SK~~~~~GlR~G~~~~~-~~~~-~~l~~~~~~~~~-------------~------~~~~  246 (353)
T PRK05387        189 GESAIPLIDRY-PNLLVVQTFSKSRSLAGLRVGFAIGH-PELI-EALNRVKNSFNS-------------Y------PLDR  246 (353)
T ss_pred             CcchHHHHhhC-CCEEEEEehhHhhcchhhhceeeecC-HHHH-HHHHHhhccCCC-------------C------CcCH
Confidence            11111121111 2357788899998755 557888753 3322 222211110000             0      0123


Q ss_pred             HHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc
Q 010842          371 LRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST  449 (499)
Q Consensus       371 l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~  449 (499)
                      +..+++...+. .+.+++..++..++++++.+.|++. ++++. ++..+.++++..+..          ..++.++|.++
T Consensus       247 ~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~----------~~~~~~~l~~~  314 (353)
T PRK05387        247 LAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL-GFEVL-PSKANFVFARHPSHD----------AAELAAKLRER  314 (353)
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCcCcEEEEECCCCC----------HHHHHHHHHHC
Confidence            34444444442 3456777788888899999999987 77754 455555555543211          35677778788


Q ss_pred             CCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          450 GRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       450 g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      |+.+..........++|++++    +.+++++++++|+++.
T Consensus       315 gi~v~~~~~~~~~~~iRis~~----~~~~~~~~~~~L~~~~  351 (353)
T PRK05387        315 GIIVRHFNKPRIDQFLRITIG----TDEEMEALVDALKEIL  351 (353)
T ss_pred             CEEEEECCCCCCCCeEEEEeC----CHHHHHHHHHHHHHHh
Confidence            865432211123468999985    5689999999998864

>PRK13393 5-aminolevulinate synthase; Provisional

Probab=99.82  E-value=1.3e-17  Score=170.66  Aligned_cols=297  Identities=12%  Similarity=0.083  Sum_probs=190.7

Q ss_pred             HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC
Q 010842          130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG  209 (499)
Q Consensus       130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G  209 (499)
                      ...++.+.+++++|.+..         +++++|++||..++......         .++.+|+++...|.++..++...|
T Consensus        91 ~~~~le~~la~~~g~~~~---------~~~~SG~~An~~ai~~l~~~---------~~g~~I~~~~~~H~s~~~~~~~~g  152 (406)
T PRK13393         91 YHVLLEAELADLHGKEAA---------LLFTSGYVSNWAALSTLGSR---------LPGCVILSDELNHASMIEGIRHSR  152 (406)
T ss_pred             HHHHHHHHHHHHhCCCcE---------EEeCCcHHHHHHHHHHhhcC---------CCCCEEEEccchhHHHHHHHHHcC
Confidence            344444559999987543         77778889999988853221         034578878889999999998888


Q ss_pred             CCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchh
Q 010842          210 VSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSA  289 (499)
Q Consensus       210 ~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~  289 (499)
                      .   +++.++.       .|+++|++.++...  ...+.+|++..+++++|.+.|+++|.++|+++|+++++|++|+.+.
T Consensus       153 ~---~~~~~~~-------~d~~~l~~~l~~~~--~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~  220 (406)
T PRK13393        153 A---EKRIFRH-------NDPADLERKLSDLD--PHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGL  220 (406)
T ss_pred             C---eEEEeCC-------CCHHHHHHHHHhcc--CCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccc
Confidence            7   7777763       37888888775421  1234578888899999999999999999999999999999997443


Q ss_pred             ccCccchhh--hcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhc-CCccCCCCCCCCCCCcccCCCcccCCC
Q 010842          290 CICPEFRHY--LNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALS-TDPEYLKNKPSESNSVVDFKDWQVGTG  365 (499)
Q Consensus       290 ~~~~~~~~~--~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~s  365 (499)
                      + .+.....  ..++ +..|.+..+.-|.++.+.  |++.. ++... +.+. ....|...                 .+
T Consensus       221 ~-g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G--G~~~~-~~~~~-~~l~~~~~~~~~t-----------------~~  278 (406)
T PRK13393        221 Y-GPRGGGIAEREGLADRLTIIEGTLAKAFGVMG--GYITG-SAALC-DFIRSFASGFIFT-----------------TS  278 (406)
T ss_pred             c-CCCCCchhhhcCCCCCCeEEEEeCchhhcccC--ceeeC-CHHHH-HHHHHhCcCceec-----------------Cc
Confidence            2 1211111  1122 235777778899998642  55543 33322 2221 11122111                 11


Q ss_pred             CC-CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHH
Q 010842          366 RR-FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLD  444 (499)
Q Consensus       366 r~-~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~  444 (499)
                      .. ..+..+..++..+...+  ...++..++++++.+.|++. +++++ ++..+++.+.+..         .....++.+
T Consensus       279 ~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~i~~v~~~~---------~~~~~~l~~  345 (406)
T PRK13393        279 LPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKA-GIPHL-PNPSHIVPVMVGD---------PVLCKQISD  345 (406)
T ss_pred             cCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCeEEEEeCC---------HHHHHHHHH
Confidence            11 11223444554442222  22355678888999999876 67655 4455666664422         123466778


Q ss_pred             HHHhc-CCEEEEee----eECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          445 WVNST-GRVYLTHT----IVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       445 ~l~~~-g~~~~~~~----~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +|.++ |.. +.+.    ...+..++|+++ +..+|++||++++++|+++.+++
T Consensus       346 ~L~~~~Gi~-v~~~~~p~~p~g~~~iRis~-~~~~t~edid~l~~~l~~~~~~~  397 (406)
T PRK13393        346 ELLDRYGIY-VQPINYPTVPRGTERLRITP-SPLHTDADIEHLVQALSEIWARL  397 (406)
T ss_pred             HHHHhCCEE-EEeECCCCCCCCCceEEEEE-CCCCCHHHHHHHHHHHHHHHHhc
Confidence            88774 754 3332    223556799999 58899999999999999987764

>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis

Probab=99.82  E-value=1.5e-18  Score=174.78  Aligned_cols=285  Identities=19%  Similarity=0.201  Sum_probs=194.0

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|...++|+.    +++++|.+..         +++++|++|+..++.+...           ++..|+++...|.+..
T Consensus        38 ~~p~~~~le~~----la~l~g~~~a---------~~~~sG~~Ai~~~l~~l~~-----------~gd~Vl~~~~~y~~~~   93 (369)
T cd00614          38 GNPTVDALEKK----LAALEGGEAA---------LAFSSGMAAISTVLLALLK-----------AGDHVVASDDLYGGTY   93 (369)
T ss_pred             CChhHHHHHHH----HHHHHCCCCE---------EEEcCHHHHHHHHHHHHcC-----------CCCEEEECCCCcchHH
Confidence            56778888887    8888887543         8899999999988887632           4667888888887755


Q ss_pred             H----HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 K----VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 k----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                      .    .+...|+   +++.++.+       |+++++++++++      +.+|++..++|++|.+.|+++|+++|+++|++
T Consensus        94 ~~~~~~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~  157 (369)
T cd00614          94 RLFERLLPKLGI---EVTFVDPD-------DPEALEAAIKPE------TKLVYVESPTNPTLKVVDIEAIAELAHEHGAL  157 (369)
T ss_pred             HHHHHHHhhcCe---EEEEeCCC-------CHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence            3    3456677   88888753       588899888653      34788899999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      ++||++|+.+....+    .-.   ++|.++.+.+|+++.+.+  .|+++.++++.. +.+.....++            
T Consensus       158 livD~t~~~~~~~~~----~~~---g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~-~~l~~~~~~~------------  217 (369)
T cd00614         158 LVVDNTFATPYLQRP----LEL---GADIVVHSATKYIGGHSDVIAGVVVGSGEALI-QRLRFLRLAL------------  217 (369)
T ss_pred             EEEECCCcchhcCCh----hhh---CCcEEEeccceeccCCCCceEEEEEeCcHHHH-HHHHHHHHhh------------
Confidence            999999987643211    111   489999999999987643  677777653322 2221111110            


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----------------CceE
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----------------HFAL  419 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~~  419 (499)
                              +........|+.++.+  +.+..++++..++++++.+.|+++|+++-+.-|                 ..++
T Consensus       218 --------g~~~~p~~a~~~l~~l--~tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i  287 (369)
T cd00614         218 --------GTILSPFDAWLLLRGL--KTLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGV  287 (369)
T ss_pred             --------CCCCCHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceE
Confidence                    1122356667766655  667788999999999999999999887544322                 3678


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHhc--C----C---EEEEeee-----E-------CC--EEEEEEeccCCCCcH
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNST--G----R---VYLTHTI-----V-------GG--LYMLRFAVGASLTDE  476 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~--g----~---~~~~~~~-----~-------~g--~~~lRi~~~~~~~t~  476 (499)
                      ++|.+.+.        .+...++.+.|.--  +    .   .+..+..     .       .|  ...+|+|++ .    
T Consensus       288 ~s~~l~~~--------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~svG-l----  354 (369)
T cd00614         288 FSFELKGG--------LEAAKKFLNALKLFSLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSVG-I----  354 (369)
T ss_pred             EEEEeCCC--------HHHHHHHHHcCCcceEcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEeC-c----
Confidence            88888642        22344555544211  1    0   0000100     0       12  357999996 2    


Q ss_pred             HHHHHHHHHHHHHH
Q 010842          477 RHVVAAWELIMEGA  490 (499)
Q Consensus       477 ~di~~l~~~l~~~~  490 (499)
                      ||++.+++.|.+..
T Consensus       355 E~~~dl~~dl~~al  368 (369)
T cd00614         355 EDVEDLIADLEQAL  368 (369)
T ss_pred             CCHHHHHHHHHHhh
Confidence            67888888887753

This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.

>PRK08133 O-succinylhomoserine sulfhydrylase; Validated

Probab=99.82  E-value=4.3e-18  Score=172.32  Aligned_cols=219  Identities=18%  Similarity=0.249  Sum_probs=157.5

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|...++|+.    +++++|.+..         ++|+||++|+..++.+...           ++..|+++...|.+..
T Consensus        59 ~~p~~~~le~~----la~l~g~~~~---------v~~ssG~~Ai~~al~al~~-----------~Gd~Vi~~~~~y~~t~  114 (390)
T PRK08133         59 TNPTVTMFQER----LAALEGAEAC---------VATASGMAAILAVVMALLQ-----------AGDHVVSSRSLFGSTV  114 (390)
T ss_pred             CChHHHHHHHH----HHHHhCCCcE---------EEECCHHHHHHHHHHHHhC-----------CCCEEEEccCcchhHH
Confidence            45666666666    8899987643         8999999999888776532           4667888888886543


Q ss_pred             ----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 ----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 ----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                          +.+...|+   +++.++++       |+++++++++++++      +|++..++|++|.+.|+++|+++|+++|++
T Consensus       115 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i~~~tk------lV~ie~p~NptG~v~dl~~I~~la~~~gi~  178 (390)
T PRK08133        115 SLFEKIFARFGI---ETTFVDLT-------DLDAWRAAVRPNTK------LFFLETPSNPLTELADIAALAEIAHAAGAL  178 (390)
T ss_pred             HHHHHHHHHcCc---EEEEECCC-------CHHHHHHhcCcCCe------EEEEECCCCCCCCcCCHHHHHHHHHHcCCE
Confidence                45567788   88888763       78899998876544      788889999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc-c-eEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-C-CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~-g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      +++|++|+......|    ...   ++|.++.++||+++++.. . |+++.++ ..+.+..    .++..          
T Consensus       179 livD~t~~~~~~~~p----l~~---g~Divv~S~sK~~~g~g~~~GG~vv~~~-~~~~~~~----~~~~~----------  236 (390)
T PRK08133        179 LVVDNCFCTPALQQP----LKL---GADVVIHSATKYLDGQGRVLGGAVVGSK-ELMEEVF----GFLRT----------  236 (390)
T ss_pred             EEEECCCcccccCCc----hhh---CCcEEEeecceeecCCcceEeEEEEcCH-HHHHHHH----HHHHH----------
Confidence            999999876543222    111   379999999999987643 3 5555443 3222111    01100          


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                             .+........|..++  |.+.+..++++..+++..+.+.|++.|+++-+
T Consensus       237 -------~g~~~~~~~a~~~l~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v  283 (390)
T PRK08133        237 -------AGPTLSPFNAWVFLK--GLETLSLRMEAHSANALALAEWLEAHPGVERV  283 (390)
T ss_pred             -------hCCCCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence                   111223455666654  45788999999999999999999999988654

>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]

Probab=99.82  E-value=6.9e-18  Score=155.21  Aligned_cols=343  Identities=13%  Similarity=0.111  Sum_probs=232.1

Q ss_pred             ccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHH
Q 010842           94 AFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAA  173 (499)
Q Consensus        94 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~a  173 (499)
                      -+.|++...+..+    ..+++.|... ..+|...++.+++.+-+...|......      -=++.++|+.+.-.|+...
T Consensus        20 L~gPGPsnl~~~V----~~A~~~~~lg-h~sPe~~qIm~~v~egikyVFkT~n~~------tf~isgsGh~g~E~al~N~   88 (385)
T KOG2862|consen   20 LLGPGPSNLSGRV----QEAMSRPSLG-HMSPEFVQIMDEVLEGIKYVFKTANAQ------TFVISGSGHSGWEAALVNL   88 (385)
T ss_pred             eecCCCcCCCHHH----HHhhcCCccc-cCCHHHHHHHHHHHHHHHHHhccCCCc------eEEEecCCcchHHHHHHhh
Confidence            4567766666554    4445544443 357889999999999999999875432      1166677776555444433


Q ss_pred             HHHHHhHhhhhccCCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEE
Q 010842          174 RDRALDAVGAENMHKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLC  251 (499)
Q Consensus       174 r~~~~~~~~~~g~~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv  251 (499)
                      ..           |+..+++-...-.+  +...++.+|+   +|..|+.+..+  ...++.+++++.+.     +|.+|.
T Consensus        89 le-----------Pgd~vLv~~~G~wg~ra~D~~~r~ga---~V~~v~~~~G~--~~~le~i~~~lsqh-----~p~~vf  147 (385)
T KOG2862|consen   89 LE-----------PGDNVLVVSTGTWGQRAADCARRYGA---EVDVVEADIGQ--AVPLEEITEKLSQH-----KPKAVF  147 (385)
T ss_pred             cC-----------CCCeEEEEEechHHHHHHHHHHhhCc---eeeEEecCccc--CccHHHHHHHHHhc-----CCceEE
Confidence            22           56666655555444  5567888999   99999888755  88999999999885     377999


Q ss_pred             EecCCCcccccCC-hhHHHHHHHHhCCEEEeeccc--cchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEe
Q 010842          252 ATVGTTSTTAVDN-VEPLAEVANEYGIWVHVDAAY--AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVK  328 (499)
Q Consensus       252 ~t~gtt~~G~id~-l~~I~~ia~~~~~~lhvD~A~--g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r  328 (499)
                      +++|.+.||..+| ++.+.++||+|+..+.||++-  |+--+..+++.        +|..-...+|.++.|.|.+++...
T Consensus       148 v~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewg--------VDvaytgSQKaL~aP~GLsiisfS  219 (385)
T KOG2862|consen  148 VTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEWG--------VDVAYTGSQKALGAPAGLSIISFS  219 (385)
T ss_pred             EEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhhc--------ccEEEecchhhcCCCCCcceeecC
Confidence            9999999999999 788899999999999999754  34333344443        999999999999999999998877


Q ss_pred             CchhHHHhhcC---CccCCCCCCCCCCCcccCCCcccCCC-CCC--C-----cHHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 010842          329 QPGLLVKALST---DPEYLKNKPSESNSVVDFKDWQVGTG-RRF--K-----SLRLWMVLRSYGVLNLQSHIRSDIRLAK  397 (499)
Q Consensus       329 ~~~~l~~~~~~---~~~yl~~~~~~~~~~~~~~~~~~~~s-r~~--~-----al~~~~~l~~~g~~g~~~~~~~~~~~a~  397 (499)
                      ++..- +....   ...|.++..    ...+|  |+-... |.+  .     -..+-++|..+-++|+++.++++.++++
T Consensus       220 ~ka~~-~~~~rK~~~~~~yFd~~----~~~~~--wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~  292 (385)
T KOG2862|consen  220 DKALE-AIRDRKTKPVSFYFDIL----RLGNF--WGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSK  292 (385)
T ss_pred             HHHHH-HHhhccCCceEEEEeHH----hhcch--hccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            76432 22211   122222211    00011  000000 111  1     1245567777889999999999999999


Q ss_pred             HHHHHHhcCCCeEEEc---CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee-ECCEEEEEEeccCCC
Q 010842          398 MFEGFVKSDPRFEIVV---PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI-VGGLYMLRFAVGASL  473 (499)
Q Consensus       398 ~l~~~L~~~~~~~~~~---~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lRi~~~~~~  473 (499)
                      +++..|+++ |++++.   ++.++.+.-...|.+        ..-+++..++.+++.+.+.+.- --...++||.++...
T Consensus       293 ~l~~~l~~~-GLq~fv~~e~~rlptvttv~vp~g--------vDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcn  363 (385)
T KOG2862|consen  293 WLKLSLEAL-GLQLFVVDEELRLPTVTTVKVPYG--------VDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCN  363 (385)
T ss_pred             HHHHHHHHh-CccceecChhhccCcceeeecCCC--------CCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeecc
Confidence            999999998 787764   233444332222322        1146677888888766554332 112346999988778


Q ss_pred             CcHHHHHHHHHHHHHHHHH
Q 010842          474 TDERHVVAAWELIMEGADR  492 (499)
Q Consensus       474 ~t~~di~~l~~~l~~~~~~  492 (499)
                      .+.+-|+..++.|+...++
T Consensus       364 a~~e~i~~v~~ll~~alq~  382 (385)
T KOG2862|consen  364 ANVEYIDNVVELLKLALQR  382 (385)
T ss_pred             CCcHHHHHHHHHHHHHHhh
Confidence            8899999999999887654

>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.82  E-value=2.9e-18  Score=174.67  Aligned_cols=242  Identities=14%  Similarity=0.112  Sum_probs=160.8

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|....+|+.    ++++.|.+..         +++++|+.|+..++.+...           ++..|+++...|.+..
T Consensus        67 ~~pt~~~le~~----la~l~g~~~~---------v~fsSG~~Ai~~al~~ll~-----------~Gd~VI~~~~~y~~t~  122 (437)
T PRK05613         67 TNPTVEALENR----IASLEGGVHA---------VAFASGQAAETAAILNLAG-----------AGDHIVTSPRLYGGTE  122 (437)
T ss_pred             cChHHHHHHHH----HHHHhCCCeE---------EEeCCHHHHHHHHHHHhcC-----------CCCEEEECCCccHHHH
Confidence            45777777777    9999987543         8888888888766655421           5678888988998764


Q ss_pred             ----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 ----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 ----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                          +.+...|+   ++++++ +.     .|+++|+++|+++++      +|+....+|++|.+.||++|+++|+++|+.
T Consensus       123 ~~~~~~l~~~Gi---~v~~vd-~~-----~d~e~l~~~l~~~tk------~V~~e~~~Np~~~v~di~~I~~la~~~gi~  187 (437)
T PRK05613        123 TLFLVTLNRLGI---EVTFVE-NP-----DDPESWQAAVQPNTK------AFFGETFANPQADVLDIPAVAEVAHRNQVP  187 (437)
T ss_pred             HHHHHHHHhcCe---EEEEEC-CC-----CCHHHHHHhCCccCe------EEEEECCCCCCCcccCHHHHHHHHHHcCCe
Confidence                44566788   899987 32     288999999987654      677778889999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCch-hHHHh--hcCCccCCCCCCCCCCC-
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPG-LLVKA--LSTDPEYLKNKPSESNS-  353 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~-~l~~~--~~~~~~yl~~~~~~~~~-  353 (499)
                      +|||++++.+....+    +..   ++|.++++.||+++++. +.|.+++.+.. .....  ....-+++......... 
T Consensus       188 livD~t~a~g~~~~p----~~~---GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (437)
T PRK05613        188 LIVDNTIATAALVRP----LEL---GADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGL  260 (437)
T ss_pred             EEEECCCccccccCh----HHh---CCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccc
Confidence            999999976544222    112   48999999999998763 33555553321 11000  00000011110000000 


Q ss_pred             -cccCC----------CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          354 -VVDFK----------DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       354 -~~~~~----------~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                       ..++.          .+....|-...+...|+.++  |.+.+..++++..++|..+.+.|+++|.++-+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V  328 (437)
T PRK05613        261 KYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQ--GLDTLSLRLERHNENAIKVAEFLNNHEKVAKV  328 (437)
T ss_pred             cccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence             00000          01112233344566676655  45889999999999999999999999987533

>PRK07811 cystathionine gamma-synthase; Provisional

Probab=99.82  E-value=3.9e-18  Score=172.49  Aligned_cols=220  Identities=18%  Similarity=0.172  Sum_probs=158.8

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|...++|+.    ++++.|.+..         +++++|++|+..++.+..+           ++..|+++...|.+..
T Consensus        59 ~~p~~~~Le~~----lA~~~g~~~~---------i~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~y~~t~  114 (388)
T PRK07811         59 GNPTRTALEEQ----LAALEGGAYG---------RAFSSGMAATDCLLRAVLR-----------PGDHIVIPNDAYGGTF  114 (388)
T ss_pred             CCccHHHHHHH----HHHHhCCCce---------EEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchHHH
Confidence            44777788887    8888988764         7778889888888776632           5667888988888654


Q ss_pred             HHHHH----hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 KVCKL----AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 ka~~~----~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                      ..+..    .|+   +++.++.       .|+++|++++.++++      +|++..++|++|.+.|+++|+++|+++|++
T Consensus       115 ~~~~~~~~~~gi---~~~~~d~-------~d~e~l~~~i~~~tk------lV~ie~p~NPtg~~~dl~~I~~la~~~gi~  178 (388)
T PRK07811        115 RLIDKVFTRWGV---EYTPVDL-------SDLDAVRAAITPRTK------LIWVETPTNPLLSITDIAALAELAHDAGAK  178 (388)
T ss_pred             HHHHHhCcCCCe---EEEEeCC-------CCHHHHHHhcCcCCe------EEEEECCCCCcceecCHHHHHHHHHHcCCE
Confidence            43332    355   5665543       489999999876543      788889999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      +++|++|+.+....+    ..   ..+|.++++.+|++++|.+  .|+++++++... +.+..    +...         
T Consensus       179 lIvD~a~a~~~~~~p----~~---~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~-~~~~~----~~~~---------  237 (388)
T PRK07811        179 VVVDNTFASPYLQQP----LA---LGADVVVHSTTKYIGGHSDVVGGALVTNDEELD-EAFAF----LQNG---------  237 (388)
T ss_pred             EEEECCCCccccCCc----hh---hCCcEEEecCceeecCCCCcEEEEEEECCHHHH-HHHHH----HHHh---------
Confidence            999999976543211    11   1489999999999998755  577777765432 22211    1000         


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                             .+........|..++.+  +.+..++++..+++..+.+.|+++|+++-+
T Consensus       238 -------~g~~~s~~~a~l~~~~L--~tl~~R~~~~~~na~~la~~L~~~p~v~~V  284 (388)
T PRK07811        238 -------AGAVPGPFDAYLTLRGL--KTLAVRMDRHSENAEAVAEFLAGHPEVSTV  284 (388)
T ss_pred             -------cCCCCCHHHHHHHHhcc--CcHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence                   01112344566666554  568888999999999999999999998644

>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase

Probab=99.82  E-value=1.3e-17  Score=167.87  Aligned_cols=331  Identities=13%  Similarity=0.098  Sum_probs=198.7

Q ss_pred             HHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc
Q 010842          107 GEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM  186 (499)
Q Consensus       107 ~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~  186 (499)
                      .+.+...+.... .+..+|...++|+.    +++++|.+.         .++|+|||+|+..++.+..-          .
T Consensus        14 ~~a~~~~~~~~~-~~~~g~~~~~~e~~----la~~~g~~~---------~v~~~sgt~aL~~~l~al~~----------~   69 (376)
T TIGR02379        14 LEYIAEAISEGK-LSGDGPFSRRCETW----LENRTGTKK---------ALLTPSCTAALEMAALLLDI----------Q   69 (376)
T ss_pred             HHHHHHHHHcCC-ccCCcHHHHHHHHH----HHHHhCCCe---------EEEeCCHHHHHHHHHHHcCC----------C
Confidence            444445554321 11135555666655    888888754         38999999998777665411          1


Q ss_pred             CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChh
Q 010842          187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVE  266 (499)
Q Consensus       187 ~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~  266 (499)
                      ++..|+++..+|.+...++...|+   +++.+++++++ +.+|+++|+++++++++      +|+   +++++|..-|++
T Consensus        70 pGd~Viv~~~t~~~~~~~~~~~G~---~~v~vd~d~~~-~~~d~~~le~~i~~~tk------~Ii---p~~~~G~~~d~~  136 (376)
T TIGR02379        70 PGDEVIMPSYTFVSTANAFVLRGA---KIVFVDIRPDT-MNIDETLIESAITHRTK------AIV---PVHYAGVACDMD  136 (376)
T ss_pred             CcCEEEECCCCcHHHHHHHHHcCC---EEEEEecCCCc-CCCCHHHHHHhcCcCce------EEE---EeCCCCCccCHH
Confidence            567899999999999999999999   99999998753 88999999999876543      555   345789999999


Q ss_pred             HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCC
Q 010842          267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKN  346 (499)
Q Consensus       267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~  346 (499)
                      +|.++|++||+++++|+||+.+......   ....+..+.++++.+.|.+......|++++++++...+..... .+=..
T Consensus       137 ~I~~la~~~~i~vIeDaa~~~g~~~~~~---~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~-~~g~~  212 (376)
T TIGR02379       137 TIMALANKHQLFVIEDAAQGVMSTYKGR---ALGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIR-EKGTN  212 (376)
T ss_pred             HHHHHHHHCCCEEEEECccccCCccCCc---ccCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHH-HhCCC
Confidence            9999999999999999999765422111   1111222445555555666543357888888765443221111 00000


Q ss_pred             CCCCC-CCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC--C-eEEEc-CCC----c
Q 010842          347 KPSES-NSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP--R-FEIVV-PRH----F  417 (499)
Q Consensus       347 ~~~~~-~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~--~-~~~~~-~~~----~  417 (499)
                      ..... .....+.  ....+.+++.-.+-+++-.-..+.+++++++.+++++++.+.|..++  + .++.. ++.    .
T Consensus       213 ~~~~~~~~~~~~~--~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~  290 (376)
T TIGR02379       213 RSQFFRGEVDKYT--WRDIGSSYLPSELQAAYLWAQLEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNA  290 (376)
T ss_pred             CccccccCCCcce--eeeecccCCccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeee
Confidence            00000 0000000  01123333332222332222347788999999999999999998764  2 23221 111    1


Q ss_pred             eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEE---eee-------EC---C---------EEEEEEeccCCCCc
Q 010842          418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLT---HTI-------VG---G---------LYMLRFAVGASLTD  475 (499)
Q Consensus       418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~~-------~~---g---------~~~lRi~~~~~~~t  475 (499)
                      ..+++++.+.         ....++.+.|.++|+..-.   +..       +.   +         ...+.+-+ ++..|
T Consensus       291 ~~~~i~~~~~---------~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~-~~~l~  360 (376)
T TIGR02379       291 HMFYIKLKDE---------DDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPL-YYGLS  360 (376)
T ss_pred             EEEEEEECCc---------CCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccC-CCCCC
Confidence            2333444321         0145677778888863210   100       00   0         22355544 78899


Q ss_pred             HHHHHHHHHHHHHHH
Q 010842          476 ERHVVAAWELIMEGA  490 (499)
Q Consensus       476 ~~di~~l~~~l~~~~  490 (499)
                      ++|+++++++|+++.
T Consensus       361 ~~~~~~i~~~i~~~~  375 (376)
T TIGR02379       361 KEDQARVIQTICDYL  375 (376)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999998863

This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).

>PRK06855 aminotransferase; Validated

Probab=99.82  E-value=2.5e-17  Score=169.47  Aligned_cols=349  Identities=13%  Similarity=0.058  Sum_probs=212.9

Q ss_pred             ChHHHHHHHHHHHc-ccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh
Q 010842          101 STAGFLGEMLCACF-NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD  179 (499)
Q Consensus       101 ~~~~~~~~~l~~~~-n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~  179 (499)
                      .+|..+.+.+...+ +.....|....+..++.+.+.+|+.+..|++-..     ...++|+|+++|+..++. ..+    
T Consensus        48 ~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~-----~~I~it~G~~~al~~~~~-l~~----  117 (433)
T PRK06855         48 KIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITP-----DDIIFFNGLGDAIAKIYG-LLR----  117 (433)
T ss_pred             CCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCH-----hHEEEcCcHHHHHHHHHH-hcC----
Confidence            34455555555544 2233467777788999999999999987764221     146899999998776653 221    


Q ss_pred             HhhhhccCCeEEEcCCCCchhHHHHH-HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc
Q 010842          180 AVGAENMHKLVVYGSDQTHSTFAKVC-KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS  258 (499)
Q Consensus       180 ~~~~~g~~~~~i~~s~~~H~s~~ka~-~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~  258 (499)
                             ++..|++.+++++.+..+. ...|+   .++.+|++++++|.+|+++|++++....    .+.+++.+.++||
T Consensus       118 -------~Gd~Vlv~~P~Y~~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~~~~~~----~~~~i~l~~P~NP  183 (433)
T PRK06855        118 -------REARVIGPSPAYSTHSSAEAAHAGY---PPVTYRLDPENNWYPDLDDLENKVKYNP----SIAGILLINPDNP  183 (433)
T ss_pred             -------CCCeEEEeCCCCchHHHHHHHhcCC---eEEEEecccccCCCCCHHHHHHHHhcCC----CceEEEEECCCCC
Confidence                   5667888989988765442 34577   8889998865568999999999986321    1236777789999


Q ss_pred             ccccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCC-CceeEecccccccCC-CcceEEEEeCc---
Q 010842          259 TTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIER-VDSFSFSPHKWLLSY-LDCCCLWVKQP---  330 (499)
Q Consensus       259 ~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~-aDsi~~~~hK~l~~p-~~~g~l~~r~~---  330 (499)
                      ||.+-+   +++|+++|++||+|+++|.+|+...+.......+..-... --.+..+..|.++.| .-+|++...+.   
T Consensus       184 TG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~  263 (433)
T PRK06855        184 TGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKD  263 (433)
T ss_pred             CCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchh
Confidence            999955   6778888999999999999998764322111111111111 125667789999744 67999987421   


Q ss_pred             hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc----HHHHHHHHHHHHHHHHHHHHHHhcC
Q 010842          331 GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG----VLNLQSHIRSDIRLAKMFEGFVKSD  406 (499)
Q Consensus       331 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g----~~g~~~~~~~~~~~a~~l~~~L~~~  406 (499)
                      ..+...+.....+....              . +   ...+...++...+.    .+.+++..+...++++.+.+.|++.
T Consensus       264 ~~~~~~~~~~~~~~~~~--------------~-~---~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~  325 (433)
T PRK06855        264 EVFKKYINSILNAKMIE--------------V-C---STTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDV  325 (433)
T ss_pred             hHHHHHHHHHHHhhccc--------------c-C---CChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            11111111100000000              0 0   01233444444442    2346666777778888899999888


Q ss_pred             CCeEEEcCCCceEEEE-EecCCCC-------CCcchhHH-----------HHHHHHHH-HHhcCCEEEEeeeEC-CEEEE
Q 010842          407 PRFEIVVPRHFALVCF-RLNPYPH-------SGSADTEM-----------LNRKLLDW-VNSTGRVYLTHTIVG-GLYML  465 (499)
Q Consensus       407 ~~~~~~~~~~~~~v~f-~~~~~~~-------~~~~~~~~-----------~~~~l~~~-l~~~g~~~~~~~~~~-g~~~l  465 (499)
                      +++.+. +|..+.+.| ++.+...       .+..+...           ...++... +.+.|..++.+..+. ....+
T Consensus       326 ~~~~~~-~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~  404 (433)
T PRK06855        326 PGLKVN-RTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGF  404 (433)
T ss_pred             CCeecc-CCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCce
Confidence            787654 555544443 4432100       00000000           12344434 445676666555553 22459


Q ss_pred             EEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          466 RFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       466 Ri~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      |+++++  .+.++|++.++.|.++.++..
T Consensus       405 Rls~~~--~~~~~i~~~~~~l~~~~~~~~  431 (433)
T PRK06855        405 RVTLLE--RDEEKFEWIYQTLAEKIEEYL  431 (433)
T ss_pred             EEEECC--CcHHHHHHHHHHHHHHHHHHh
Confidence            999963  478999999999999887654

>PRK04870 histidinol-phosphate aminotransferase; Provisional

Probab=99.81  E-value=2.3e-17  Score=165.91  Aligned_cols=312  Identities=15%  Similarity=0.133  Sum_probs=201.9

Q ss_pred             hHHHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842          102 TAGFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA  180 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~  180 (499)
                      +|..+-+.+.+.+... ...|.. +...++++.    +++.+|.+...      ..++|+|+++++..++.+..+     
T Consensus        40 ~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~----ia~~~~~~~~~------~I~~t~G~~~~i~~~~~~~~~-----  103 (356)
T PRK04870         40 LPAELRAELGERLAEVALNRYPD-PRAAALKAA----LRAAMGVPAGA------DVLLGNGSDELIQLLALACAK-----  103 (356)
T ss_pred             CCHHHHHHHHHHhhccccccCCC-CCHHHHHHH----HHHHhCcCCCC------cEEEcCCHHHHHHHHHHHhcC-----
Confidence            3334455555555332 233443 444455555    77777875421      357888888877666554422     


Q ss_pred             hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842          181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT  260 (499)
Q Consensus       181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G  260 (499)
                            ++..|+++.++|..+..+++..|+   +++.+|+++  +|.+|+++|++.+....     +.+|+++.++||||
T Consensus       104 ------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~--~~~~d~~~l~~~~~~~~-----~~~v~l~~p~NPtG  167 (356)
T PRK04870        104 ------PGATVLAPEPGFVMYRMSAKLAGL---EFVGVPLTA--DFTLDLPAMLAAIAEHR-----PALVFLAYPNNPTG  167 (356)
T ss_pred             ------CCCEEEECCCCHHHHHHHHHHcCC---EEEEecCCC--CCCCCHHHHHHHhhcCC-----CCEEEEcCCCCCCC
Confidence                  567788999999999999999999   999999874  36899999999986421     23677788999999


Q ss_pred             ccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC
Q 010842          261 AVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD  340 (499)
Q Consensus       261 ~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~  340 (499)
                      .+-+.+++.++++..+.++++|++|..+..  ..+...+.... --.++.+..|++.....+|+++..+ ..+.+.....
T Consensus       168 ~~~~~~~~~~i~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~-~vi~~~S~SK~~~~GlRiG~~i~~~-~~i~~~~~~~  243 (356)
T PRK04870        168 NLFDDADVERIIEAAPGLVVVDEAYQPFAG--DSWLPRLARFP-NLLVMRTVSKLGLAGLRLGYLAGHP-AWIAELDKVR  243 (356)
T ss_pred             CCCCHHHHHHHHHHCCCEEEEECCchhhcC--cchHHHHhhCC-CEEEEecchhhhhHHHhhhhhhCCH-HHHHHHHHcc
Confidence            999998888888877999999999976431  11111122222 1356778899433334588877643 2222211111


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceE
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFAL  419 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~  419 (499)
                      ..+  .                     ...+...++...+. .+.+++..++..++++++.+.|++.+++.+. ++..+.
T Consensus       244 ~~~--~---------------------~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~  299 (356)
T PRK04870        244 PPY--N---------------------VNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAANF  299 (356)
T ss_pred             CCC--c---------------------CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeE
Confidence            111  0                     01233333333321 2447777888888999999999998888754 555566


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      +.+++.+            ..++.+.+.++|+.+.....+.  +..++|++++    +.+++++++++|+++
T Consensus       300 ~~~~~~~------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~  355 (356)
T PRK04870        300 ILVRVPD------------AAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG----TPEENAQFLAALKAA  355 (356)
T ss_pred             EEEECCC------------HHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHHh
Confidence            6666531            3456777777886554443332  2468999995    688999999999875

>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic

Probab=99.81  E-value=4.2e-18  Score=171.67  Aligned_cols=284  Identities=17%  Similarity=0.199  Sum_probs=188.5

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK  203 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k  203 (499)
                      .|...++|+.    +++++|.+.         .+++++|+.|+..++. ..    .       ++..|+++...|.+..+
T Consensus        46 ~p~~~~le~~----la~l~g~~~---------~l~~~sG~~al~~~l~-ll----~-------~Gd~Vl~~~~~y~~~~~  100 (378)
T TIGR01329        46 NPTRTALESL----LAKLDKADR---------AFAFSSGMAALDVITR-LL----N-------NGDEIIAGDDLYGGTDR  100 (378)
T ss_pred             ChHHHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHH-Hh----C-------CCCEEEEcCCCchHHHH
Confidence            4545555555    899999854         3778888876554332 21    1       56678888888877654


Q ss_pred             ----HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842          204 ----VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV  279 (499)
Q Consensus       204 ----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l  279 (499)
                          .+...|+   +++.++.+       |+++++++++++++      +|+++.++|++|.+.|+++|+++|+++|+++
T Consensus       101 ~~~~~~~~~G~---~v~~vd~~-------d~~~le~~i~~~tk------lv~le~psnptg~v~dl~~I~~la~~~g~~v  164 (378)
T TIGR01329       101 LLTQVVPRSGV---VVVHVDTT-------DLDKVKAALGPKTK------LVLLESPTNPLQKIVDIRKISEMAHAQNALV  164 (378)
T ss_pred             HHHHHHHHcCc---EEEEeCCC-------CHHHHHHhcCcCce------EEEEECCCCCCCeeecHHHHHHHHHHcCCEE
Confidence                3455788   88888752       78999999875443      8999999999999999999999999999999


Q ss_pred             EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842          280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF  357 (499)
Q Consensus       280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  357 (499)
                      +||++|+......    ....   ++|.+++++|||+++|.+  .|+++++++....+.....    ..           
T Consensus       165 ivD~a~~~~~~~~----~l~~---g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~----~~-----------  222 (378)
T TIGR01329       165 VVDNTMMSPLLCN----PLEL---GADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQ----NS-----------  222 (378)
T ss_pred             EEECCCcccccCC----hhhc---CCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHH----Hh-----------
Confidence            9999986553221    1111   489999999999998877  8888887754322211100    00           


Q ss_pred             CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEcC-----C-----------CceEE
Q 010842          358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFE-IVVP-----R-----------HFALV  420 (499)
Q Consensus       358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~-----~-----------~~~~v  420 (499)
                            .+........|..++  |.+.+..++++..+++..+.+.|+++|.+. +..|     |           ..+++
T Consensus       223 ------~G~~~~~~~a~l~~~--~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~  294 (378)
T TIGR01329       223 ------TGSGLAPFDCWLLLR--GIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVL  294 (378)
T ss_pred             ------cCCcCCHHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEE
Confidence                  011122344455444  457889999999999999999999988763 2221     1           23578


Q ss_pred             EEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE--------E-Eee-----eE-------CC--EEEEEEeccCCCCcHH
Q 010842          421 CFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY--------L-THT-----IV-------GG--LYMLRFAVGASLTDER  477 (499)
Q Consensus       421 ~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~--------~-~~~-----~~-------~g--~~~lRi~~~~~~~t~~  477 (499)
                      +|.+..         .....++.+.|..-+...        + .+.     ..       .|  .+.+|+|++     -|
T Consensus       295 sf~~~~---------~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG-----lE  360 (378)
T TIGR01329       295 SFETGS---------VALSKRLVEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVG-----IE  360 (378)
T ss_pred             EEEECC---------HHHHHHHHHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEec-----cC
Confidence            888732         122445666553322111        1 111     00       11  357999997     35


Q ss_pred             HHHHHHHHHHHHHHH
Q 010842          478 HVVAAWELIMEGADR  492 (499)
Q Consensus       478 di~~l~~~l~~~~~~  492 (499)
                      |++.+++.|.+..++
T Consensus       361 ~~~dl~~dl~~al~~  375 (378)
T TIGR01329       361 DVDDLISDLDIAFVT  375 (378)
T ss_pred             CHHHHHHHHHHHHHh
Confidence            777788888777654

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PLN02509 cystathionine beta-lyase

Probab=99.81  E-value=4.4e-18  Score=173.88  Aligned_cols=216  Identities=17%  Similarity=0.216  Sum_probs=154.3

Q ss_pred             HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH----H
Q 010842          130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV----C  205 (499)
Q Consensus       130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka----~  205 (499)
                      ..+++.++++++.|.+..         ++++||+.|+ .++.....           ++..|+++...|.+..+.    +
T Consensus       134 t~~aLE~~lA~leg~e~a---------i~~~SG~aAi-~~il~ll~-----------~GD~VI~~~~~y~~t~~ll~~~l  192 (464)
T PLN02509        134 TRDALESLLAKLDKADRA---------FCFTSGMAAL-SAVTHLIK-----------NGEEIVAGDDVYGGSDRLLSQVV  192 (464)
T ss_pred             HHHHHHHHHHHHhCCCEE---------EEeCcHHHHH-HHHHHHhC-----------CCCEEEEcCCchhhHHHHHHHHH
Confidence            345555668898876543         7778887664 33333211           567788899999876643    4


Q ss_pred             HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842          206 KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY  285 (499)
Q Consensus       206 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~  285 (499)
                      ...|+   .++.++.       .|+++++++|.++++      +|++..++|++|.+.|+++|+++|+++|++++||++|
T Consensus       193 ~~~G~---~v~~vd~-------~d~e~l~~ai~~~Tk------lV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~  256 (464)
T PLN02509        193 PRSGV---VVKRVNT-------TNLDEVAAAIGPQTK------LVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSI  256 (464)
T ss_pred             HHCCe---EEEEeCC-------CCHHHHHHhCCcCCe------EEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCc
Confidence            45677   7777753       378999998866543      8899999999999999999999999999999999999


Q ss_pred             cchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842          286 AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVG  363 (499)
Q Consensus       286 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~  363 (499)
                      +.+....+    ..   .++|.++++.+||+++|.+  +|+++++++....+...     +...                
T Consensus       257 a~~~~~~p----l~---~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~-----~~~~----------------  308 (464)
T PLN02509        257 MSPVLSRP----LE---LGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYF-----LQNS----------------  308 (464)
T ss_pred             cccccCCh----hh---cCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHH-----HHHh----------------
Confidence            76643211    11   1489999999999998876  78888776543221110     0000                


Q ss_pred             CCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          364 TGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       364 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                      .+..+....+|+.++.+  +.+..++++..++++++.+.|+++|.++-+
T Consensus       309 ~g~~l~p~~A~l~lr~L--~tL~~R~~r~~~nA~~la~~L~~~p~V~~V  355 (464)
T PLN02509        309 EGSGLAPFDCWLCLRGI--KTMALRIEKQQENARKIAMYLSSHPRVKKV  355 (464)
T ss_pred             cCCCcCHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHHhcCCCccEE
Confidence            01122345667666654  788999999999999999999999988533

>PRK08776 cystathionine gamma-synthase; Provisional

Probab=99.81  E-value=1.2e-17  Score=169.49  Aligned_cols=220  Identities=16%  Similarity=0.151  Sum_probs=155.9

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--  200 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--  200 (499)
                      ..|....+|+.    ++++.|.+.         .+++++|++|+.+++.+...           ++..|+++...|..  
T Consensus        58 ~~p~~~~Le~~----lA~l~g~~~---------~v~~~sG~~Ai~~~l~all~-----------pGD~Vvv~~p~Y~~t~  113 (405)
T PRK08776         58 GNPTRDLLGEA----LAELEGGAG---------GVITATGMGAINLVLNALLQ-----------PGDTLVVPHDAYGGSW  113 (405)
T ss_pred             CChHHHHHHHH----HHHHhCCCc---------eEEEcCHHHHHHHHHHHHhC-----------CCCEEEEccCCchHHH
Confidence            34555666655    888888654         38888999887766665422           56678888888876  


Q ss_pred             --HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          201 --FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       201 --~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                        +...+...|+   +++.++.       .|+++|++++++++      .+|++..++|++|.+.|+++|+++|+++|++
T Consensus       114 ~~~~~~~~~~g~---~v~~v~~-------~d~~~l~~~i~~~t------klV~l~~P~NPtG~v~dl~~I~~la~~~gi~  177 (405)
T PRK08776        114 RLFNALAKKGHF---ALITADL-------TDPRSLADALAQSP------KLVLIETPSNPLLRITDLRFVIEAAHKVGAL  177 (405)
T ss_pred             HHHHHHHHhcCc---EEEEECC-------CCHHHHHHhcCcCC------eEEEEECCCCCCCccCCHHHHHHHHHHcCCE
Confidence              3333445566   6666653       37899998886544      3788889999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      ++||++|+.....    +...   -.+|.++.++||++++|.+  .|+++.++++...+ +.....+             
T Consensus       178 vIvD~a~a~~~~~----~pl~---~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~-l~~~~~~-------------  236 (405)
T PRK08776        178 TVVDNTFLSPALQ----KPLE---FGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQ-LVWWANA-------------  236 (405)
T ss_pred             EEEECCCcccccC----Cccc---ccCCEEEecCceeecCCCCceEEEEEeCCHHHHHH-HHHHHHh-------------
Confidence            9999999764321    1111   1489999999999998855  57777766543322 2110000             


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                             .+-....+..|+.++  |.+.++.++++..+++..+.+.|+++|.++-+
T Consensus       237 -------~g~~~s~~~a~l~~~--gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V  283 (405)
T PRK08776        237 -------LGLTGSPFDAFLTLR--GLRTLDARLRVHQENADAIAALLDGHAAVNQV  283 (405)
T ss_pred             -------cCCCCCHHHHHHHHh--hhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence                   011124566777664  55888999999999999999999999987643

>PLN02607 1-aminocyclopropane-1-carboxylate synthase

Probab=99.81  E-value=4e-17  Score=167.80  Aligned_cols=320  Identities=13%  Similarity=0.080  Sum_probs=207.6

Q ss_pred             ChhhHHHHHHHHHHHHHHcCC----CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842          124 SPASTELEIVVMDWLATMLKL----PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS  199 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~----~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~  199 (499)
                      ..+...+.+++.+++.+.+|.    +++       ..++|+|+++|+.+.+.+..+           ++..|+++.+.+.
T Consensus        94 ~~G~~~LR~aiA~~l~~~~~~~~~v~p~-------~Ivit~G~t~al~~l~~~l~~-----------pGD~Vlv~~P~Y~  155 (447)
T PLN02607         94 YHGLKSFRQAMASFMEQIRGGKARFDPD-------RIVLTAGATAANELLTFILAD-----------PGDALLVPTPYYP  155 (447)
T ss_pred             CcchHHHHHHHHHHHHHhcCCCCCcCHH-------HeEEcCChHHHHHHHHHHhCC-----------CCCEEEEcCCCCc
Confidence            346678999999999988773    222       468999999988776655432           5678889999998


Q ss_pred             hHHHHHH-HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHh
Q 010842          200 TFAKVCK-LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEY  275 (499)
Q Consensus       200 s~~ka~~-~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~  275 (499)
                      .+...+. ..|+   +++.|+++.+++|.+|++++++++++..+.|.++.+|+.+.|+||+|.+-+   +++|.++|++|
T Consensus       156 ~f~~~~~~~~g~---~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~  232 (447)
T PLN02607        156 GFDRDLRWRTGV---KIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRK  232 (447)
T ss_pred             chHHHHHhcCCc---EEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHC
Confidence            8887776 4788   899999886556889999999999887777777778888999999999955   78889999999


Q ss_pred             CCEEEeeccccchhccCccchh---hhcCC------CCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCC
Q 010842          276 GIWVHVDAAYAGSACICPEFRH---YLNGI------ERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLK  345 (499)
Q Consensus       276 ~~~lhvD~A~g~~~~~~~~~~~---~~~g~------~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~  345 (499)
                      ++++++|.+|+...+..+.+..   .....      +++ .+..+..|.++.| .-+|+++..++... ..+.....|..
T Consensus       233 ~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v-~vi~s~SK~fg~~GlRvG~ivs~n~~l~-~~~~~~~~~~~  310 (447)
T PLN02607        233 NIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERV-HIVYSLSKDLGLPGFRVGTIYSYNDKVV-TTARRMSSFTL  310 (447)
T ss_pred             CCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcE-EEEEcchhcCCCCcceEEEEEEcCHHHH-HHHHHHhhcCC
Confidence            9999999999876543222222   11111      111 3567889998754 66898887655432 22221111100


Q ss_pred             CCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce-E
Q 010842          346 NKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-----LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA-L  419 (499)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-~  419 (499)
                                        .    ..+...+....+..     ..+++..++..+..+.+.+.|++. +++.. ++..+ .
T Consensus       311 ------------------~----s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~-~~~ag~f  366 (447)
T PLN02607        311 ------------------V----SSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECL-KGNAGLF  366 (447)
T ss_pred             ------------------C----CHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcc-cCCeeEE
Confidence                              0    11222333333322     223344455566677788888876 66654 34433 4


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      +++++...-  ... ..+...++.+++.+ .|..+..+..+.  ..+++|+++++  .++++++..+++|.++.++-..
T Consensus       367 vw~~L~~~~--~~~-~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~--~~~~~l~~gl~Ri~~~l~~~~~  440 (447)
T PLN02607        367 CWMNLSPLL--ETP-TREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFAN--MSEDTLEVALKRIHRFMDRRKT  440 (447)
T ss_pred             EEEEchHhh--cCC-CchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEecc--CCHHHHHHHHHHHHHHHHHHHh
Confidence            444553210  000 01112356666665 465443333343  35799999963  4688999999999988766543

>PRK06234 methionine gamma-lyase; Provisional

Probab=99.81  E-value=1.4e-17  Score=169.14  Aligned_cols=288  Identities=20%  Similarity=0.222  Sum_probs=193.7

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|...+||+.    +++++|.+.         .++++||+.|+..++.+...           ++..|+++...|.+..
T Consensus        62 ~~p~~~~Le~~----iA~~~g~~~---------~l~~~sG~~Ai~~al~~ll~-----------~Gd~Vl~~~~~y~~~~  117 (400)
T PRK06234         62 GNPTSTEVENK----LALLEGGEA---------AVVAASGMGAISSSLWSALK-----------AGDHVVASDTLYGCTF  117 (400)
T ss_pred             CCccHHHHHHH----HHHHhCCCc---------EEEEcCHHHHHHHHHHHHhC-----------CCCEEEEecCccchHH
Confidence            67888888888    888888654         38999999998777765432           5667888888776533


Q ss_pred             ----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh--C
Q 010842          203 ----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY--G  276 (499)
Q Consensus       203 ----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~--~  276 (499)
                          ..++..|+   +++.++.+       |+++++++++++++      +|++..++|++|.+.|+++|+++|+++  |
T Consensus       118 ~~~~~~~~~~G~---~v~~vd~~-------d~e~l~~~i~~~tk------lI~iesP~NPtG~v~dl~~I~~la~~~~~~  181 (400)
T PRK06234        118 ALLNHGLTRYGV---EVTFVDTS-------NLEEVRNALKANTK------VVYLETPANPTLKVTDIKAISNIAHENNKE  181 (400)
T ss_pred             HHHHHHHhhCCe---EEEEECCC-------CHHHHHHHhccCCe------EEEEECCCCCCCCcCCHHHHHHHHHhcCCC
Confidence                44567888   88888642       78999999876544      788899999999999999999999997  9


Q ss_pred             CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcC-CccCCCCCCCCCCC
Q 010842          277 IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALST-DPEYLKNKPSESNS  353 (499)
Q Consensus       277 ~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~  353 (499)
                      +++++|++|+.+....+    .  +. .+|.++.+.+|+++++..  .|+++.+++ .. +.+.. ...+.         
T Consensus       182 i~livDea~~~~~~~~~----l--~~-g~Divv~S~sK~l~g~g~~~gG~v~~~~~-~~-~~l~~~~~~~~---------  243 (400)
T PRK06234        182 CLVFVDNTFCTPYIQRP----L--QL-GADVVVHSATKYLNGHGDVIAGFVVGKEE-FI-NQVKLFGIKDM---------  243 (400)
T ss_pred             CEEEEECCCCchhcCCc----h--hh-CCcEEEeeccccccCCCCceeEEEEecHH-HH-HHHHHHHHHHh---------
Confidence            99999999986643211    1  11 489999999999987753  577766543 22 22211 00100         


Q ss_pred             cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-C-----C-----------C
Q 010842          354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-P-----R-----------H  416 (499)
Q Consensus       354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~-----~-----------~  416 (499)
                                .+........|..++.  .+.+..++++..++++++.+.|++.|.+.-+. |     |           .
T Consensus       244 ----------~g~~l~p~~a~l~~~~--l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~  311 (400)
T PRK06234        244 ----------TGSVIGPFEAFLIIRG--MKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLP  311 (400)
T ss_pred             ----------cCCCCCHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCC
Confidence                      1112345566666654  46777899999999999999999998875432 2     1           2


Q ss_pred             ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE--------EE-ee-----eE-------CC--EEEEEEeccCCC
Q 010842          417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY--------LT-HT-----IV-------GG--LYMLRFAVGASL  473 (499)
Q Consensus       417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~--------~~-~~-----~~-------~g--~~~lRi~~~~~~  473 (499)
                      .++++|.+.+.        .+...++.+.|.--+...        +. +.     .+       .|  ...+|+|++   
T Consensus       312 g~l~s~~l~~~--------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svG---  380 (400)
T PRK06234        312 GAMISFELKGG--------VEEGKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVG---  380 (400)
T ss_pred             CceEEEEecCc--------HHHHHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeC---
Confidence            45788887532        122355666553322100        10 10     00       01  357999996   


Q ss_pred             CcHHHHHHHHHHHHHHHHHH
Q 010842          474 TDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       474 ~t~~di~~l~~~l~~~~~~l  493 (499)
                        -||.+.+++.|.++.+.+
T Consensus       381 --lE~~~dl~~dl~~al~~~  398 (400)
T PRK06234        381 --LEDVDDIIADLKQALDLI  398 (400)
T ss_pred             --CCCHHHHHHHHHHHHHHH
Confidence              356777777777766554

>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional

Probab=99.81  E-value=1.5e-17  Score=168.79  Aligned_cols=235  Identities=13%  Similarity=0.146  Sum_probs=170.2

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch--
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS--  199 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~--  199 (499)
                      ...|...++|++    ++++.|.+..         +++++|+.|+..++.+...           ++..|+++...|.  
T Consensus        67 ~~~p~~~~le~~----lA~l~g~~~a---------l~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~~~~t  122 (403)
T PRK07810         67 YGNPTVSMFEER----LRLIEGAEAC---------FATASGMSAVFTALGALLG-----------AGDRLVAARSLFGSC  122 (403)
T ss_pred             CCCchHHHHHHH----HHHHhCCCcE---------EEECChHHHHHHHHHHHhC-----------CCCEEEEccCCcchH
Confidence            356777788887    8999997653         9999999998887765432           5667888876653  


Q ss_pred             --hHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842          200 --TFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI  277 (499)
Q Consensus       200 --s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~  277 (499)
                        .+.+.+...|+   +++.++.       .|+++++++|+++++      +|++..++|++|.+-|+++|+++|+++|+
T Consensus       123 ~~~~~~~~~~~G~---~v~~vd~-------~d~~~l~~ai~~~tk------lV~~esp~Nptg~v~dl~~I~~la~~~g~  186 (403)
T PRK07810        123 FVVCNEILPRWGV---ETVFVDG-------EDLSQWEEALSVPTQ------AVFFETPSNPMQSLVDIAAVSELAHAAGA  186 (403)
T ss_pred             HHHHHHHHHHcCc---EEEEECC-------CCHHHHHHhcCcCce------EEEEECCCCCCCeecCHHHHHHHHHHcCC
Confidence              34456677788   8888864       388999999977654      78899999999999999999999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV  355 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  355 (499)
                      +++||++|+.+....+    ...   ++|.++.+.||+++++.+  .|+++.++.. +.+.+.   .+...         
T Consensus       187 ~vivD~a~a~~~~~~~----~~~---gaDivv~S~tK~l~g~g~~~gG~v~~~~~~-~~~~l~---~~~~~---------  246 (403)
T PRK07810        187 KVVLDNVFATPLLQRG----LPL---GADVVVYSGTKHIDGQGRVLGGAILGDREY-IDGPVQ---KLMRH---------  246 (403)
T ss_pred             EEEEECCCCccccCCh----hhc---CCcEEEccCCceecCCcCceeEEEEeChHH-HHHHHH---HHHHH---------
Confidence            9999999976543221    111   489999999999987643  5777665532 221111   01100         


Q ss_pred             cCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-C-----C-----------Cce
Q 010842          356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-P-----R-----------HFA  418 (499)
Q Consensus       356 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~-----~-----------~~~  418 (499)
                              .+........|+.++.  .+.+..++++..+++.++.+.|+++|.++-+. |     |           ..+
T Consensus       247 --------~g~~~s~~~a~l~l~~--L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~  316 (403)
T PRK07810        247 --------TGPALSAFNAWVLLKG--LETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGT  316 (403)
T ss_pred             --------hCCCCCHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCce
Confidence                    1122345667776664  48899999999999999999999999876443 2     2           245


Q ss_pred             EEEEEecC
Q 010842          419 LVCFRLNP  426 (499)
Q Consensus       419 ~v~f~~~~  426 (499)
                      +++|.+..
T Consensus       317 ~~s~~l~~  324 (403)
T PRK07810        317 VVTFELDA  324 (403)
T ss_pred             EEEEEEcC
Confidence            78888854

>PRK08574 cystathionine gamma-synthase; Provisional

Probab=99.80  E-value=7.7e-18  Score=169.92  Aligned_cols=218  Identities=18%  Similarity=0.140  Sum_probs=158.1

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF  201 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~  201 (499)
                      ...|...++|+.    +++++|.+..         ++++||+.|+..++.+...           ++..|+++...|.+.
T Consensus        50 ~~np~~~~lE~~----lA~l~g~~~~---------l~~~sG~~Ai~~~l~~ll~-----------~GD~Vlv~~~~y~~~  105 (385)
T PRK08574         50 EENPTLRPLEEA----LAKLEGGVDA---------LAFNSGMAAISTLFFSLLK-----------AGDRVVLPMEAYGTT  105 (385)
T ss_pred             CCCccHHHHHHH----HHHHhCCCcE---------EEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhH
Confidence            455777888888    8999987543         8889999998888775532           567788899999987


Q ss_pred             HHHHHH---hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHH-HHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842          202 AKVCKL---AGVSPANIRALPTSVDANFSLSPQLLRRAVEA-DVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI  277 (499)
Q Consensus       202 ~ka~~~---~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~-~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~  277 (499)
                      ...++.   .|+   +++.++        +|+++|++++++ ++      .+|++..++|++|.+-|+++|+++|+++|+
T Consensus       106 ~~~~~~~~~~g~---~v~~~~--------~d~~~l~~~i~~~~t------klV~ie~p~NPtG~v~dl~~I~~la~~~gi  168 (385)
T PRK08574        106 LRLLKSLEKFGV---KVVLAY--------PSTEDIIEAIKEGRT------KLVFIETMTNPTLKVIDVPEVAKAAKELGA  168 (385)
T ss_pred             HHHHHHhhccCc---EEEEEC--------CCHHHHHHhcCccCc------eEEEEECCCCCCCEecCHHHHHHHHHHcCC
Confidence            776644   355   555542        367889888865 33      378889999999999999999999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV  355 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  355 (499)
                      ++++|++|+.+....    .+..   ++|.++.+.||++++|.+  .|++++++++...+..... .+            
T Consensus       169 ~livD~t~a~~~~~~----~l~~---GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~-~~------------  228 (385)
T PRK08574        169 ILVVDNTFATPLLYR----PLRH---GADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWR-RR------------  228 (385)
T ss_pred             EEEEECCCCccccCC----hhhh---CCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHH-Hh------------
Confidence            999999997654321    1112   489999999999998865  4656666654332211110 01            


Q ss_pred             cCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010842          356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFE  410 (499)
Q Consensus       356 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~  410 (499)
                              .|.....+..|..++.  .+.+..++++..+++.++.+.|+++|.++
T Consensus       229 --------~g~~~~p~~a~l~l~~--l~tL~~R~~~~~~na~~la~~L~~~p~v~  273 (385)
T PRK08574        229 --------LGTIMQPFEAYLVLRG--LKTLEVRFERQCRNAMAIAEFLSEHPKVA  273 (385)
T ss_pred             --------cCCCCCHHHHHHHHcc--cCcHHHHHHHHHHHHHHHHHHHHcCCCcC
Confidence                    1112234555666554  47788899999999999999999999875

>PRK08249 cystathionine gamma-synthase; Provisional

Probab=99.80  E-value=1.2e-17  Score=169.13  Aligned_cols=290  Identities=17%  Similarity=0.165  Sum_probs=192.2

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF  201 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~  201 (499)
                      ...|...++|+.    ++++.|.+..         +++++|++|+..++.+...           ++..|+++...|.+.
T Consensus        61 ~~~p~~~~le~~----lA~l~g~~~~---------i~~ssG~~Ai~~~l~all~-----------~GD~Vi~~~~~y~~~  116 (398)
T PRK08249         61 NTNPTVQAFEEK----VRILEGAEAA---------TAFSTGMAAISNTLYTFLK-----------PGDRVVSIKDTYGGT  116 (398)
T ss_pred             CCChHHHHHHHH----HHHHhCCCeE---------EEeCChHHHHHHHHHHhcC-----------CCCEEEEcCCchHHH
Confidence            456777777777    8899987553         8888889888877765432           566788898999865


Q ss_pred             HH----HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842          202 AK----VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI  277 (499)
Q Consensus       202 ~k----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~  277 (499)
                      ..    .+...|+   +++.++       ..|+++++++|+++++      +|++..++|++|.+.|+++|+++|+++|+
T Consensus       117 ~~~~~~~~~~~Gi---~v~~vd-------~~d~e~l~~~i~~~tk------lV~ie~p~NPtg~v~dl~~I~~la~~~gi  180 (398)
T PRK08249        117 NKIFTEFLPRMGV---DVTLCE-------TGDHEQIEAEIAKGCD------LLYLETPTNPTLKIVDIERLAAAAKKVGA  180 (398)
T ss_pred             HHHHHHHHhhCCe---EEEEcC-------CCCHHHHHHhcCCCCe------EEEEECCCCCCCccCCHHHHHHHHHHcCC
Confidence            43    3456677   776664       2589999999876543      78888999999999999999999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc-ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      +++||++|+.+....    ...   ..+|.++.+.+|+++++.+ .|.+++.+++...+..... .+             
T Consensus       181 ~livD~t~a~~~~~~----~l~---~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~-~~-------------  239 (398)
T PRK08249        181 LVVVDNTFATPINQN----PLA---LGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYR-EI-------------  239 (398)
T ss_pred             EEEEECCcCccccCC----chh---hCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHH-Hh-------------
Confidence            999999998643221    111   1489999999999987643 2333444444332211110 00             


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-C-----C-----------CceE
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-P-----R-----------HFAL  419 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~-----~-----------~~~~  419 (499)
                             .+........|+.++.  .+.+..++++..++++.+.+.|+++|.++-+. |     |           ..++
T Consensus       240 -------~g~~~s~~~a~l~l~~--l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~  310 (398)
T PRK08249        240 -------NGATMDPMSAYLILRG--MKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGI  310 (398)
T ss_pred             -------cCCCCCHHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCce
Confidence                   1112345666766664  47788899999999999999999999886442 2     1           1357


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHh--cCC-------EEEEee-----eE-------CC--EEEEEEeccCCCCcH
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNS--TGR-------VYLTHT-----IV-------GG--LYMLRFAVGASLTDE  476 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~--~g~-------~~~~~~-----~~-------~g--~~~lRi~~~~~~~t~  476 (499)
                      ++|.+...        .+...++++.|.-  .+.       .+..+.     ..       .|  ...+|+|++     -
T Consensus       311 ~sf~~~~~--------~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG-----l  377 (398)
T PRK08249        311 LSFVLKGG--------MDTVKRLLPKLRYAHRAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVG-----I  377 (398)
T ss_pred             EEEEEcCC--------HHHHHHHHHhCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEec-----c
Confidence            88877531        2224455555421  110       011010     00       11  357999996     3


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 010842          477 RHVVAAWELIMEGADRLF  494 (499)
Q Consensus       477 ~di~~l~~~l~~~~~~l~  494 (499)
                      ||++.+++.|.+..+.+.
T Consensus       378 E~~~dl~~dl~~al~~~~  395 (398)
T PRK08249        378 EDTEDLIADLEQAFAHLE  395 (398)
T ss_pred             CCHHHHHHHHHHHHHHhh
Confidence            567777777777766544

>PRK09028 cystathionine beta-lyase; Provisional

Probab=99.80  E-value=1.8e-17  Score=166.55  Aligned_cols=232  Identities=15%  Similarity=0.156  Sum_probs=164.4

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|....+|+.    ++++.|...         .++++||++|+..++.+..+           ++..|+++...|....
T Consensus        59 ~npt~~~Le~~----iA~le~~~~---------~~~~~sG~~Ai~~~l~all~-----------~GD~Vvv~~~~Y~~t~  114 (394)
T PRK09028         59 GTPTHFAFQAA----IVELEGGAG---------TALYPSGAAAISNALLSFLK-----------AGDHLLMVDSCYEPTR  114 (394)
T ss_pred             CCchHHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEECCCcHHHH
Confidence            35766788877    667666533         48999999998887766532           5677888888886665


Q ss_pred             HH----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 KV----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                      ..    +...|+   ++..++.+       +.+.+++++.++++      +|+++.++|++|.+.|+++|+++||++|+|
T Consensus       115 ~l~~~~l~~~Gi---~v~~v~~~-------~~e~l~~~l~~~Tk------lV~lespsNPtg~v~dl~~I~~la~~~g~~  178 (394)
T PRK09028        115 DLCDKILKGFGI---ETTYYDPM-------IGEGIRELIRPNTK------VLFLESPGSITMEVQDVPTLSRIAHEHDIV  178 (394)
T ss_pred             HHHHHhhhhcce---EEEEECCC-------CHHHHHHhcCcCce------EEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence            43    344677   77766532       45778888866554      899999999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      ++||++|+.....-|.    -.   +||.+..+.|||++++.+  .|++ +.+++...+ +.....+             
T Consensus       179 lvvD~t~a~p~~~~Pl----~~---GaDivv~S~tK~l~Gh~d~~~G~~-~~~~~~~~~-l~~~~~~-------------  236 (394)
T PRK09028        179 VMLDNTWASPINSRPF----EM---GVDISIQAATKYIVGHSDVMLGTA-TANEKHWDQ-LREHSYL-------------  236 (394)
T ss_pred             EEEECCccccccCCcc----cc---CceEEEEeCCeEecCCCCEEEEEE-ECCHHHHHH-HHHHHHh-------------
Confidence            9999999876432221    11   499999999999998844  4544 455433221 1110000             


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cC-----C-----------CceE
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VP-----R-----------HFAL  419 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~-----~-----------~~~~  419 (499)
                             .|....+...|..++  |.+.+.-++++..++|..+.+.|+++|.++-+ .|     |           ..++
T Consensus       237 -------~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~  307 (394)
T PRK09028        237 -------MGQCTSPDDVYLAMR--GLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGL  307 (394)
T ss_pred             -------cCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCce
Confidence                   122234566776665  45789999999999999999999999987543 22     1           2457


Q ss_pred             EEEEec
Q 010842          420 VCFRLN  425 (499)
Q Consensus       420 v~f~~~  425 (499)
                      ++|.+.
T Consensus       308 ~sf~l~  313 (394)
T PRK09028        308 FSFVLK  313 (394)
T ss_pred             EEEEEC
Confidence            888885

>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase

Probab=99.80  E-value=4.4e-17  Score=166.05  Aligned_cols=326  Identities=14%  Similarity=0.074  Sum_probs=205.5

Q ss_pred             HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      |..+.+.+...+. ....|....+..++.+++.+|+.+.+|.+....  .....++|+|+++|+..++.+..+       
T Consensus        43 ~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~--~~~~i~it~Ga~~al~~~~~~l~~-------  112 (393)
T TIGR03538        43 PAFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRFDLPTGVD--PERHVLPVNGTREALFAFAQAVIN-------  112 (393)
T ss_pred             CHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCC--CCceEEECCCcHHHHHHHHHHHcC-------
Confidence            4456666665443 234566566678899999999999887652100  001357899999988877766542       


Q ss_pred             hhccCC--eEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842          183 AENMHK--LVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT  260 (499)
Q Consensus       183 ~~g~~~--~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G  260 (499)
                          ++  ..|+++.+++..+...++..|+   +++.||++++++|.+|+++|++++.++++      +|+.+.++||||
T Consensus       113 ----~gd~~~vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~k------~i~l~~p~NPtG  179 (393)
T TIGR03538       113 ----PGQAPLVVMPNPFYQIYEGAALLAGA---EPYFLNCTAENGFLPDFDAVPESVWRRCQ------LLFVCSPGNPTG  179 (393)
T ss_pred             ----CCCcceEEecCCCCcchHHHHHhcCC---eEEEeeccccCCCCCCHHHHHHHHhhcce------EEEEeCCCCCcC
Confidence                33  3488888899989999999999   99999997655689999999998865433      677789999999


Q ss_pred             ccCC---hhHHHHHHHHhCCEEEeeccccchhccCc-cchhh---hcCCC--C--CceeEecccccc-cCCCcceEEEEe
Q 010842          261 AVDN---VEPLAEVANEYGIWVHVDAAYAGSACICP-EFRHY---LNGIE--R--VDSFSFSPHKWL-LSYLDCCCLWVK  328 (499)
Q Consensus       261 ~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~-~~~~~---~~g~~--~--aDsi~~~~hK~l-~~p~~~g~l~~r  328 (499)
                      .+-+   +++|+++|++|++++++|.+|+.+..... .....   .....  .  --.++.+..|.+ ....-+|+++..
T Consensus       180 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~~  259 (393)
T TIGR03538       180 AVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAGD  259 (393)
T ss_pred             cccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEecC
Confidence            9955   78999999999999999999986543210 00010   11110  0  125678899964 445678887764


Q ss_pred             CchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCC
Q 010842          329 QPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDP  407 (499)
Q Consensus       329 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~  407 (499)
                      . ..+ +.+.....+..                    .....+..++++..+. .+.+++..++..+..+.+.+.|++. 
T Consensus       260 ~-~l~-~~~~~~~~~~~--------------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-  316 (393)
T TIGR03538       260 A-EIL-KAFLRYRTYHG--------------------CAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQV-  316 (393)
T ss_pred             H-HHH-HHHHHHHHhhc--------------------cCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence            3 222 22211111110                    0112333444444442 3445666666777777788888764 


Q ss_pred             CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--------CEEEEEEeccCCCCcHHH
Q 010842          408 RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--------GLYMLRFAVGASLTDERH  478 (499)
Q Consensus       408 ~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--------g~~~lRi~~~~~~~t~~d  478 (499)
                       +.+..+.....+++++. ..          ..++.+.+.+ .|+.+..+..+.        +..++|++++   .++++
T Consensus       317 -~~~~~p~gg~f~~~~~~-~~----------~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~---~~~~~  381 (393)
T TIGR03538       317 -LDLELPDAGFYLWPKVP-GD----------DEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALV---APLEE  381 (393)
T ss_pred             -CcccCCCeeEEEEEECC-CC----------HHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEec---CCHHH
Confidence             33333334444445553 11          2456666654 576554444331        2468999986   25788


Q ss_pred             HHHHHHHHHHH
Q 010842          479 VVAAWELIMEG  489 (499)
Q Consensus       479 i~~l~~~l~~~  489 (499)
                      +++.+++|.++
T Consensus       382 l~~~l~~l~~~  392 (393)
T TIGR03538       382 CVEAAERIRSF  392 (393)
T ss_pred             HHHHHHHHHHh
Confidence            99999888764

This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>PRK00950 histidinol-phosphate aminotransferase; Validated

Probab=99.80  E-value=3.9e-17  Score=164.64  Aligned_cols=282  Identities=14%  Similarity=0.114  Sum_probs=180.6

Q ss_pred             HHHHHHHHcCCCCccccCCCccEEE-cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCC
Q 010842          134 VMDWLATMLKLPKTFMFSGTGGGVI-QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSP  212 (499)
Q Consensus       134 ~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~  212 (499)
                      +++.+++++|.+.+       ..++ ++|+++++..++.+...           ++..|+++.+.+..+...++..|+  
T Consensus        74 lr~~ia~~~~~~~~-------~i~~~~~Ga~~~i~~~~~~~~~-----------~gd~vlv~~p~y~~~~~~~~~~g~--  133 (361)
T PRK00950         74 LREALSKYTGVPVE-------NIIVGGDGMDEVIDTLMRTFID-----------PGDEVIIPTPTFSYYEISAKAHGA--  133 (361)
T ss_pred             HHHHHHHHhCCCHH-------HEEEeCCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC--
Confidence            34447777888654       3466 55666665555544321           456788888888888888899999  


Q ss_pred             CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccC
Q 010842          213 ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACIC  292 (499)
Q Consensus       213 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~  292 (499)
                       +++.+|.+.  +|.+|+++|++.+..++      .+|+++.++|+||.+-|+++|.++|+++|+++++|++|+.+.  .
T Consensus       134 -~~~~~~~~~--~~~~~~~~l~~~~~~~~------~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~--~  202 (361)
T PRK00950        134 -KPVYAKREE--DFSLDVDSVLNAITEKT------KVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFA--E  202 (361)
T ss_pred             -EEEEeecCC--CCCcCHHHHHHHhccCC------CEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhC--c
Confidence             999998654  46899999999885432      367778999999999999999999999999999999997653  1


Q ss_pred             ccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcH
Q 010842          293 PEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSL  371 (499)
Q Consensus       293 ~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al  371 (499)
                      ............ -.+..+..|.++.| ...|+++..++  +.+.+.......                .      ...+
T Consensus       203 ~~~~~~~~~~~~-vi~~~S~SK~~g~~GlRiG~~~~~~~--~~~~~~~~~~~~----------------~------~~~~  257 (361)
T PRK00950        203 YDYTPLALEYDN-LIIGRTFSKVFGLAGLRIGYGFVPEW--LIDYYMRAKTPF----------------S------LTRL  257 (361)
T ss_pred             cchHHHHHhcCC-EEEEEeehHhhcCchhhcchhcCCHH--HHHHHHHhcCCC----------------C------CCHH
Confidence            122222222111 24456788998755 34677766432  222221110000                0      1133


Q ss_pred             HHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcC
Q 010842          372 RLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTG  450 (499)
Q Consensus       372 ~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g  450 (499)
                      ....+...+. .+.+++..++..++++++.+.|.    +++. ++..+.+++++.+..          ..++.++|.++|
T Consensus       258 ~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~-~~~~~~i~~~~~~~~----------~~~~~~~l~~~g  322 (361)
T PRK00950        258 SQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVY-PSEANFVLVDVTPMT----------AKEFCEELLKRG  322 (361)
T ss_pred             HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeEC-CCcceEEEEECCCCC----------HHHHHHHHHHCC
Confidence            4444444443 23356666666666666666664    4443 455566666663221          456777787888


Q ss_pred             CEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          451 RVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       451 ~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      +.+..+..+.  +..++|++++    +.+++++++++|+++.
T Consensus       323 v~v~~~~~f~~~~~~~lRis~~----~~~~~~~l~~~L~~il  360 (361)
T PRK00950        323 VIVRDCTSFRGLGDYYIRVSIG----TFEENERFLEILKEIV  360 (361)
T ss_pred             EEEeeCCccCCCCCCeEEEECC----CHHHHHHHHHHHHHHh
Confidence            5544433332  3468999985    6789999999998764

>PRK08064 cystathionine beta-lyase; Provisional

Probab=99.80  E-value=1.9e-17  Score=167.53  Aligned_cols=286  Identities=16%  Similarity=0.182  Sum_probs=190.7

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH-
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF-  201 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~-  201 (499)
                      ..|....+|+.    ++++.|.+..         +++++|+.|+..++. ...           ++..|+++...|.+. 
T Consensus        52 ~~p~~~~le~~----lA~l~g~~~~---------v~~~sG~~ai~~~l~-~l~-----------~Gd~Vlv~~~~y~~~~  106 (390)
T PRK08064         52 GNPTREALEDI----IAELEGGTKG---------FAFASGMAAISTAFL-LLS-----------KGDHVLISEDVYGGTY  106 (390)
T ss_pred             CChhHHHHHHH----HHHHhCCCCe---------EEECCHHHHHHHHHH-HhC-----------CCCEEEEccCccchHH
Confidence            45777778877    8999997653         777888887765553 221           456788888888643 


Q ss_pred             ---HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          202 ---AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       202 ---~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                         .+.++..|+   +++.++.+       |+++++++++++++      +|+++.++|++|.+.|+++|.++|+++|++
T Consensus       107 ~~~~~~~~~~G~---~v~~v~~~-------d~~~l~~~l~~~tk------lV~l~~p~NptG~~~dl~~I~~la~~~g~~  170 (390)
T PRK08064        107 RMITEVLSRFGI---EHTFVDMT-------NLEEVAQNIKPNTK------LFYVETPSNPLLKVTDIRGVVKLAKAIGCL  170 (390)
T ss_pred             HHHHHHHHHcCC---EEEEECCC-------CHHHHHHhcCCCce------EEEEECCCCCCcEeccHHHHHHHHHHcCCE
Confidence               355666888   89998753       68899988876554      889999999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      ++||++|+.+....+.    ..   ++|.++.++|||+++|.+  .|++++++++...+......               
T Consensus       171 vvvD~a~~~~~~~~~~----~~---g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~---------------  228 (390)
T PRK08064        171 TFVDNTFLTPLLQKPL----DL---GADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQN---------------  228 (390)
T ss_pred             EEEECCCCcccccCch----hh---CCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHH---------------
Confidence            9999999765432221    11   389999999999988876  58888876543322111110               


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEcC-----C-----------CceE
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFE-IVVP-----R-----------HFAL  419 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~-----~-----------~~~~  419 (499)
                            ..+....+...|..+  .|.+.+..++++..+++..+.+.|+++|.+. +..+     |           ..++
T Consensus       229 ------~~g~~~~~~~a~l~~--~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~  300 (390)
T PRK08064        229 ------SFGAVLGVQDCWLVL--RGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAV  300 (390)
T ss_pred             ------hcCCCCCHHHHHHHH--cccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceE
Confidence                  011112344566544  3556778999999999999999999988763 2221     1           2357


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHh------cCC---EEEEe-----eeE-------CC--EEEEEEeccCCCCcH
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNS------TGR---VYLTH-----TIV-------GG--LYMLRFAVGASLTDE  476 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~------~g~---~~~~~-----~~~-------~g--~~~lRi~~~~~~~t~  476 (499)
                      ++|.+..         .+...++++.+.-      -|.   .+..+     ...       .|  ...+|+|++ ...++
T Consensus       301 ~sf~~~~---------~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvG-le~~~  370 (390)
T PRK08064        301 LSFTLQS---------EEAVRQFVSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVG-LENVD  370 (390)
T ss_pred             EEEEECC---------HHHHHHHHHhCCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEec-cCCHH
Confidence            8888743         1123344444321      010   00000     000       12  357999996 76777


Q ss_pred             HHHHHHHHHHHHH
Q 010842          477 RHVVAAWELIMEG  489 (499)
Q Consensus       477 ~di~~l~~~l~~~  489 (499)
                      +.|+.+.++|.++
T Consensus       371 dli~dl~~Al~~~  383 (390)
T PRK08064        371 DLIADFEQALSYV  383 (390)
T ss_pred             HHHHHHHHHHHhc
Confidence            7777777777663

>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.80  E-value=1.5e-17  Score=169.75  Aligned_cols=239  Identities=15%  Similarity=0.184  Sum_probs=162.0

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-  200 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-  200 (499)
                      ...|....||++    ++++.|.+.         .++++||+.|+..++.....           ++..|+++...|.. 
T Consensus        61 ~~~p~~~~Le~~----lA~leg~~~---------al~~~sG~~Ai~~al~~ll~-----------~GD~Vlv~~~~y~~t  116 (431)
T PRK08248         61 IMNPTTDVFEKR----IAALEGGIG---------ALAVSSGQAAITYSILNIAS-----------AGDEIVSSSSLYGGT  116 (431)
T ss_pred             CCCchHHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEccCchhhH
Confidence            346777788887    899998654         39999999998888776532           56678888877754 


Q ss_pred             ---HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842          201 ---FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI  277 (499)
Q Consensus       201 ---~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~  277 (499)
                         +...++..|+   +++.|+.       .|+++++++|+++++      +|++..++|++|.+-|+++|+++|+++|+
T Consensus       117 ~~~~~~~~~~~Gv---~v~~vd~-------~d~e~l~~ai~~~tk------lV~l~sp~NPtG~v~di~~I~~la~~~gi  180 (431)
T PRK08248        117 YNLFAHTLPKLGI---TVKFVDP-------SDPENFEAAITDKTK------ALFAETIGNPKGDVLDIEAVAAIAHEHGI  180 (431)
T ss_pred             HHHHHHHHHhCCE---EEEEECC-------CCHHHHHHhcCCCCe------EEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence               3445667888   8888875       388999998865443      78888999999999999999999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc-ceEEEEeCchhHHHhhcCCccC--CCCCCCCCCCc
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-CCCLWVKQPGLLVKALSTDPEY--LKNKPSESNSV  354 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~r~~~~l~~~~~~~~~y--l~~~~~~~~~~  354 (499)
                      +++||++|+......|    ..   -++|.++.+.|||++.|.. .|.+++.+....   ......|  +.....+....
T Consensus       181 ~vIvD~t~a~~~~~~p----l~---~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~  250 (431)
T PRK08248        181 PLIVDNTFASPYLLRP----IE---HGADIVVHSATKFIGGHGTSIGGVIVDSGKFD---WKGSGKFPGLTEPDPSYHGL  250 (431)
T ss_pred             EEEEeCCCCccccCCh----hH---cCCCEEEEcCccccCCCCCceEEEEEeCCccc---cccccccccccCCccccccc
Confidence            9999999975432222    11   1499999999999998853 566666433211   0000000  11000000000


Q ss_pred             --cc-----------CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          355 --VD-----------FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       355 --~~-----------~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                        .+           ........|....+...|+.++  |.+.+..++++..++|..+.+.|+++|.++-+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V  319 (431)
T PRK08248        251 VYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQ--GLETLHLRMERHSENALAVAKFLEEHEAVEWV  319 (431)
T ss_pred             hhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCcceE
Confidence              00           0000112233445566666554  45888899999999999999999999997643

>PRK07050 cystathionine beta-lyase; Provisional

Probab=99.80  E-value=1.5e-17  Score=168.34  Aligned_cols=290  Identities=14%  Similarity=0.097  Sum_probs=194.6

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|...++|+.    ++++.|.+.         +++++|||+|+..++.+...           ++..|+++...|....
T Consensus        63 ~~pt~~~Le~~----lA~l~g~~~---------~l~~~sgt~Ai~~~l~al~~-----------~GD~Vl~~~~~y~~~~  118 (394)
T PRK07050         63 ATPTSLALAQR----LAEIEGGRH---------ALLQPSGLAAISLVYFGLVK-----------AGDDVLIPDNAYGPNR  118 (394)
T ss_pred             CCHHHHHHHHH----HHHHhCCCe---------EEEeccHHHHHHHHHHHHhC-----------CCCEEEEecCCcccHH
Confidence            45666777776    888888643         48999999999988876632           5778999998988755


Q ss_pred             ----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 ----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 ----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                          ..+...|+   +++.++..       +.++++++|+++++      +|++..++|++|.+.|+++|+++|+++|++
T Consensus       119 ~~~~~~~~~~Gi---~v~~vd~~-------~~~~l~~~i~~~tk------lV~le~p~Np~~~~~di~~I~~ia~~~gi~  182 (394)
T PRK07050        119 DHGEWLARDFGI---TVRFYDPL-------IGAGIADLIQPNTR------LIWLEAPGSVTMEVPDVPAITAAARARGVV  182 (394)
T ss_pred             HHHHHHHHhcCe---EEEEECCC-------CHHHHHHhcCCCCe------EEEEECCCCCCccHhhHHHHHHHHHHcCCE
Confidence                35567788   88887642       44678888765443      788999999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      +++|++|+.+...    +.+..   ++|.++.+.+|++++..+  .|++++++++...+.... ..++            
T Consensus       183 livD~a~a~~~~~----~~l~~---GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~-~~~~------------  242 (394)
T PRK07050        183 TAIDNTYSAGLAF----KPFEH---GVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLA-RMRL------------  242 (394)
T ss_pred             EEEECCccccccc----CHHHc---CCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHH-HHhc------------
Confidence            9999999776432    22222   389999999999987655  577777766533222111 0111            


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----------------CceE
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----------------HFAL  419 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~~  419 (499)
                              |-...+...|.+++.  .+.+..++++..+++..+.+.|++.|.+.-+..|                 ..++
T Consensus       243 --------G~~~~~~~a~l~lr~--l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~  312 (394)
T PRK07050        243 --------GIGVSADDCSLVLRG--LPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGL  312 (394)
T ss_pred             --------CCCCCHHHHHHHHcC--CCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceE
Confidence                    111234556766653  4677889999999999999999999987644311                 1345


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE--------EEeee-----E----CCEEEEEEeccCCCCcHHHHHHH
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY--------LTHTI-----V----GGLYMLRFAVGASLTDERHVVAA  482 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~--------~~~~~-----~----~g~~~lRi~~~~~~~t~~di~~l  482 (499)
                      +.|.+.+..  +    .+...++.+.|..-+...        +.+..     .    ...+.+|+|++     -||++.+
T Consensus       313 ~s~~l~~~~--~----~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svG-----lE~~~dl  381 (394)
T PRK07050        313 FSVVFDERY--S----PAQVDAFVEALELFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIG-----LEDEADL  381 (394)
T ss_pred             EEEEECCCC--C----HHHHHHHHHcCCCCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEeC-----cCCHHHH
Confidence            777775421  0    122345555554332110        11110     0    01157999996     3567777


Q ss_pred             HHHHHHHHHHH
Q 010842          483 WELIMEGADRL  493 (499)
Q Consensus       483 ~~~l~~~~~~l  493 (499)
                      ++.|.+..+..
T Consensus       382 ~~dl~~al~~~  392 (394)
T PRK07050        382 IADLEQALEAA  392 (394)
T ss_pred             HHHHHHHHHHh
Confidence            77777776654

>PRK01688 histidinol-phosphate aminotransferase; Provisional

Probab=99.80  E-value=9.5e-18  Score=168.11  Aligned_cols=283  Identities=13%  Similarity=0.119  Sum_probs=191.0

Q ss_pred             HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCC-eEEEcCCCCchhHHHHHHHhCC
Q 010842          132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHK-LVVYGSDQTHSTFAKVCKLAGV  210 (499)
Q Consensus       132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~-~~i~~s~~~H~s~~ka~~~~G~  210 (499)
                      .++.+++++.+|.+.+       ..++|+|+++++..++.+...           ++ ..|+++.++|..+...++..|+
T Consensus        60 ~~l~~~~a~~~g~~~~-------~I~~~~Gs~e~i~~~~~~~~~-----------~g~~~vli~~P~y~~y~~~~~~~G~  121 (351)
T PRK01688         60 KAVIENYAAYAGVKPE-------QVLVSRGADEGIELLIRAFCE-----------PGKDAILYCPPTYGMYSVSAETIGV  121 (351)
T ss_pred             HHHHHHHHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCCEEEEcCCCHHHHHHHHHHcCC
Confidence            4566779999999765       468999999988777765432           33 6788899999999999999999


Q ss_pred             CCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh--CCEEEeeccccch
Q 010842          211 SPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY--GIWVHVDAAYAGS  288 (499)
Q Consensus       211 g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~--~~~lhvD~A~g~~  288 (499)
                         +++.+|.++  +|.+|++++++++ +++      .+|+++.++||||.+-+.+++.++++..  +.++++|+||..+
T Consensus       122 ---~~~~v~~~~--~~~~d~~~l~~~~-~~~------~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f  189 (351)
T PRK01688        122 ---EIRTVPTLD--NWQLDLPAIADNL-DGV------KVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEF  189 (351)
T ss_pred             ---EEEEeecCC--CCCCCHHHHHHhc-cCC------cEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhc
Confidence               999999875  3799999999887 333      3788889999999998877777776542  6899999999765


Q ss_pred             hccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhc-CCccCCCCCCCCCCCcccCCCcccCCCC
Q 010842          289 ACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALS-TDPEYLKNKPSESNSVVDFKDWQVGTGR  366 (499)
Q Consensus       289 ~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr  366 (499)
                      ... +.......... --.+.-+..|+++.| ..+|+++... +.. +.+. ...+|-                      
T Consensus       190 ~~~-~s~~~~~~~~~-n~iv~rSfSK~~glaGlRiGy~i~~~-~~i-~~l~~~~~~~~----------------------  243 (351)
T PRK01688        190 CPQ-ASLAGWLAEYP-HLVILRTLSKAFALAGLRCGFTLANE-EVI-NLLLKVIAPYP----------------------  243 (351)
T ss_pred             CCC-CChHHHHhhCC-CEEEEecchHhhcCHHHHHhHHhCCH-HHH-HHHHhccCCCC----------------------
Confidence            311 11112222111 124667789988744 4468877543 332 2222 111110                      


Q ss_pred             CCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHH
Q 010842          367 RFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLL  443 (499)
Q Consensus       367 ~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~  443 (499)
                       ...+...++...+   +.+.+++.++...+.++++.+.|+++++++.+.++..+.+.+++.+            ..++.
T Consensus       244 -v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~~------------~~~l~  310 (351)
T PRK01688        244 -LSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFTA------------SSAVF  310 (351)
T ss_pred             -CCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcCC------------HHHHH
Confidence             0122222233333   2345677777777888999999999888754556666766666532            35677


Q ss_pred             HHHHhcCCEEEEeeeE-CCEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          444 DWVNSTGRVYLTHTIV-GGLYMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       444 ~~l~~~g~~~~~~~~~-~g~~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                      +.|.++|+.+...... ....++|+++.    +++|+++++++|+
T Consensus       311 ~~L~~~gi~vr~~~~~~~~~~~iRis~~----~~~e~~~l~~al~  351 (351)
T PRK01688        311 KSLWDQGIILRDQNKQPGLSNCLRITIG----TREECQRVIDALR  351 (351)
T ss_pred             HHHHHCCeEEEECCCcCCCCCeEEEeCC----CHHHHHHHHHhhC
Confidence            8888888655443333 22468999995    6799999999873

>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial

Probab=99.79  E-value=2.1e-17  Score=166.00  Aligned_cols=286  Identities=15%  Similarity=0.163  Sum_probs=191.3

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|....+|++    ++++.|.+.         .++++||++|+..++.+...           ++..|++++..|....
T Consensus        48 gnPt~~~lE~~----lA~l~g~~~---------~~~~~sG~~Ai~~al~all~-----------~GD~Vl~~~~~y~~t~  103 (377)
T TIGR01324        48 GTLTHFALQDA----MCELEGGAG---------CYLYPSGLAAVTNSILAFVK-----------AGDHVLMVDSAYEPTR  103 (377)
T ss_pred             CCccHHHHHHH----HHHHhCCCc---------EEEECcHHHHHHHHHHHhcC-----------CCCEEEEcCCCcHHHH
Confidence            45777888888    888888654         38899999999888876532           5667888888886655


Q ss_pred             HH----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 KV----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                      ..    +...|+   ++..++..       +.++|+++++++++      +|+++.++|++|.+.||++|+++|+++|+|
T Consensus       104 ~~~~~~~~~~gi---~v~~~d~~-------~~e~l~~~i~~~tk------lV~lesp~Np~g~~~dl~~I~~la~~~g~~  167 (377)
T TIGR01324       104 YFCDIVLKRMGV---DITYYDPL-------IGEDIATLIQPNTK------VLFLEAPSSITFEIQDIPAIAKAARNPGIV  167 (377)
T ss_pred             HHHHHHHHhcCc---EEEEECCC-------CHHHHHHhcCCCce------EEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence            43    345677   77776532       22778888866544      899999999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      ++||++|+.+...-|    +..   ++|.++.+.|||++++.+  .|+++.++ +.+.+...  ..++.           
T Consensus       168 livD~t~a~g~~~~p----l~~---gaDivv~S~tK~l~G~~d~~gG~v~~~~-~~~~~l~~--~~~~~-----------  226 (377)
T TIGR01324       168 IMIDNTWAAGLLFKP----LEH---GVDISIQAGTKYLVGHSDIMIGTVVANA-RTWDQLRE--HSYLM-----------  226 (377)
T ss_pred             EEEECCCccccccCc----ccc---CceEEEecCceeccCCCCceEEEEEeCH-HHHHHHHH--HHHHh-----------
Confidence            999999987654322    111   499999999999988755  56665543 33221110  11111           


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEcC-----C-----------CceE
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFE-IVVP-----R-----------HFAL  419 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~-----~-----------~~~~  419 (499)
                              |....+...|..++.  .+.+..++++..++|..+.+.|++.|.++ +..|     |           ..++
T Consensus       227 --------G~~l~p~~a~~~~rg--l~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~  296 (377)
T TIGR01324       227 --------GQMVDADDAYTTLRG--LRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGL  296 (377)
T ss_pred             --------CCCCCHHHHHHHHhh--hhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCce
Confidence                    112234566766664  47778889999999999999999999874 3322     1           2467


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE--------EEe-e-e----------ECCEEEEEEeccCCCCcHHHH
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY--------LTH-T-I----------VGGLYMLRFAVGASLTDERHV  479 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~--------~~~-~-~----------~~g~~~lRi~~~~~~~t~~di  479 (499)
                      ++|.+....       .+...++.+.|..-+...        +.+ . .          ..+ ..+|+|++     -||.
T Consensus       297 ~s~~l~~~~-------~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~-~liR~svG-----lE~~  363 (377)
T TIGR01324       297 FSFVLQRLT-------QKQVHAFLDHLQLFGLGYSWGGYESLALCNQPELGHRPNIKRNLEG-PLIRVHIG-----LENV  363 (377)
T ss_pred             EEEEECCCC-------HHHHHHHHHhCCcceEeccCCCccceeecCCCCCCHHHHHhccCCC-CEEEEEeC-----CCCH
Confidence            888885421       122345666554322110        110 0 0          012 46999996     2467


Q ss_pred             HHHHHHHHHHHHH
Q 010842          480 VAAWELIMEGADR  492 (499)
Q Consensus       480 ~~l~~~l~~~~~~  492 (499)
                      +.+++.|.+..+.
T Consensus       364 ~dl~~dl~~al~~  376 (377)
T TIGR01324       364 DDLKADLKAGFEA  376 (377)
T ss_pred             HHHHHHHHHHHhc
Confidence            7777777776543

This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.

>PRK09148 aminotransferase; Validated

Probab=99.79  E-value=1.4e-16  Score=162.71  Aligned_cols=333  Identities=14%  Similarity=0.048  Sum_probs=205.9

Q ss_pred             HHHHHHHHHHHcc-cCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          103 AGFLGEMLCACFN-SVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       103 ~~~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      +..... +...++ .....|....+..++.+++.+|+.+.+|.+-..    ....++|+|+++++..++.+..+      
T Consensus        46 ~~~~~~-~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~I~it~G~~~al~~~~~~l~~------  114 (405)
T PRK09148         46 QHIVDK-LCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNP----DTQVVATLGSKEGFANMAQAITA------  114 (405)
T ss_pred             HHHHHH-HHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEcCChHHHHHHHHHHhcC------
Confidence            333333 444443 223456655677899999999998887864211    01368999999998777765532      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                           ++..|+++.++|..+...+...|+   +++.||++.++.+   ++++++.+....   .++.+|+.+.++||||.
T Consensus       115 -----~gd~Vl~~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~---~~~l~~~~~~~~---~~~~~v~l~~P~NPtG~  180 (405)
T PRK09148        115 -----PGDVILCPNPSYPIHAFGFIMAGG---VIRSVPAEPDEEF---FPALERAVRHSI---PKPIALIVNYPSNPTAY  180 (405)
T ss_pred             -----CCCEEEEcCCCCcccHHHHHhcCC---EEEEEeCCCCCCC---ccCHHHHHhhcc---ccceEEEEeCCCCCCCc
Confidence                 566788899999999888899999   9999999765434   444555554221   13458889999999999


Q ss_pred             cCCh---hHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842          262 VDNV---EPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK  335 (499)
Q Consensus       262 id~l---~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~  335 (499)
                      +-+.   ++|.++|++||+++++|.+|+.+..........  +.+......++.+..|.++.| .-+|+++. ++..+ +
T Consensus       181 ~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~-~~~~i-~  258 (405)
T PRK09148        181 VADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG-NERLI-A  258 (405)
T ss_pred             CCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeC-CHHHH-H
Confidence            9665   678889999999999999998754321111111  111111234578889999855 55788875 33322 2


Q ss_pred             hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                      .+.....++...                    ...+...++...+  +...+++..++..+.++++.+.|++. ++.+. 
T Consensus       259 ~l~~~~~~~~~~--------------------~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~-  316 (405)
T PRK09148        259 ALTRVKSYLDYG--------------------AFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA-GWDIP-  316 (405)
T ss_pred             HHHHHHHHhccC--------------------CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCccC-
Confidence            222211111110                    0122333333333  23456666777788888899999886 66544 


Q ss_pred             CCCce-EEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          414 PRHFA-LVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       414 ~~~~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      +|..+ .+++++++..  ...    ...++.+.+. +.|+.+..+..+.  +..++|+++.   .+.+.+++.++.|.++
T Consensus       317 ~p~~g~f~~~~l~~~~--~~~----~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~---~~~~~l~~al~~l~~~  387 (405)
T PRK09148        317 PPAASMFAWAPIPEAF--RHL----GSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV---ENEQRIRQAARNIKRF  387 (405)
T ss_pred             CCCeeEEEEEECCCcc--CCC----CHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec---CCHHHHHHHHHHHHHH
Confidence            34434 4444543310  000    1245566655 5676555444443  2468999985   4678888888888887


Q ss_pred             HHHH
Q 010842          490 ADRL  493 (499)
Q Consensus       490 ~~~l  493 (499)
                      .+++
T Consensus       388 l~~~  391 (405)
T PRK09148        388 LSSA  391 (405)
T ss_pred             HHHH
Confidence            6654

>PRK03158 histidinol-phosphate aminotransferase; Provisional

Probab=99.79  E-value=7.8e-17  Score=162.26  Aligned_cols=289  Identities=13%  Similarity=0.086  Sum_probs=192.8

Q ss_pred             hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842          125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka  204 (499)
                      ++..+++++    +++.+|.+.+       ..++|+|+++++..++.+..+           ++..|+++.+++..+...
T Consensus        64 ~g~~~lr~~----ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~v~~~~p~y~~~~~~  121 (359)
T PRK03158         64 GYAPELRTK----VAKHLGVDEE-------QLLFGAGLDEVIQMISRALLN-----------PGTNTVMAEPTFSQYRHN  121 (359)
T ss_pred             CcHHHHHHH----HHHHhCCCHH-------HEEECCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCHHHHHHH
Confidence            445555555    6666777544       468899999887665554422           466788899999999999


Q ss_pred             HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH--hCCEEEee
Q 010842          205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE--YGIWVHVD  282 (499)
Q Consensus       205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~--~~~~lhvD  282 (499)
                      +...|.   +++.+|++ +  +.+|+++|++.+.+++      .+|+++.++||||.+-+.++|.++++.  +|+++++|
T Consensus       122 ~~~~g~---~~~~~~~~-~--~~~d~~~l~~~~~~~~------~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~D  189 (359)
T PRK03158        122 AIIEGA---EVREVPLK-D--GGHDLEAMLKAIDEQT------KIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLD  189 (359)
T ss_pred             HHHcCC---eEEEEecC-C--CCcCHHHHHHhcCCCC------CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEE
Confidence            999999   99999987 3  4799999998875433      367778999999999999999999887  59999999


Q ss_pred             ccccchhccCc--cchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842          283 AAYAGSACICP--EFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD  359 (499)
Q Consensus       283 ~A~g~~~~~~~--~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  359 (499)
                      ++|..+.....  ......... .-..+..+..|.++.| .-+|+++... +.+ +.+......                
T Consensus       190 e~y~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~g~~GlRiG~~v~~~-~~~-~~~~~~~~~----------------  250 (359)
T PRK03158        190 EAYYEYVTAEDYPDTLPLLEKY-ENLIVLRTFSKAYGLAALRVGYGIASE-ELI-EKLNIARPP----------------  250 (359)
T ss_pred             CchHhhcCCcccccHHHHHHhc-CCEEEEEechHhhcCcchhhehhcCCH-HHH-HHHHHhcCC----------------
Confidence            99977543211  111111111 1245667888999855 5578887643 222 222111000                


Q ss_pred             cccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHH
Q 010842          360 WQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEML  438 (499)
Q Consensus       360 ~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~  438 (499)
                      +      ....+...++...+. .+.+++..+...+..+++.+.|++. ++.+. ++..+.+++.+.. .          
T Consensus       251 ~------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~g~~i~~~~~~-~----------  311 (359)
T PRK03158        251 F------NTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY-GLFYY-PSQTNFIFVDTGR-D----------  311 (359)
T ss_pred             C------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeC-CCcCcEEEEECCC-C----------
Confidence            0      012344555555543 2345556666677778888888887 67665 4455555555421 1          


Q ss_pred             HHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          439 NRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       439 ~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      ..++.+.|.++|..+..+..+....++|++++    +.+++++++++|+++
T Consensus       312 ~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~----~~~~~~~l~~al~~~  358 (359)
T PRK03158        312 ANELFEALLKKGYIVRSGAALGFPTGVRITIG----LKEQNDKIIELLKEL  358 (359)
T ss_pred             HHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHh
Confidence            35677777778866555444544578999985    789999999999875

>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.79  E-value=1.7e-17  Score=169.08  Aligned_cols=310  Identities=15%  Similarity=0.138  Sum_probs=193.6

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|....+|+.    ++++.|.+..         +++++|+.|+..++.+...           ++..|+++...|....
T Consensus        67 ~~p~~~~Le~~----lA~l~g~~~a---------v~~sSG~aAi~~al~all~-----------~Gd~Vv~~~~~y~~t~  122 (436)
T PRK07812         67 MNPTQDVVEQR----IAALEGGVAA---------LLLASGQAAETFAILNLAG-----------AGDHIVSSPRLYGGTY  122 (436)
T ss_pred             CCchHHHHHHH----HHHHhCCCeE---------EEEccHHHHHHHHHHHHhC-----------CCCEEEEeCCcchHHH
Confidence            35777777777    8999987654         8999999998888765532           4667888877777655


Q ss_pred             HH----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 KV----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                      ..    +...|+   .++.++ +     ..|+++++++|+++++      +|++..++|++|.+.|+++|+++||++|++
T Consensus       123 ~~~~~~l~~~Gi---~v~~vd-d-----~~d~e~l~~ai~~~tk------lV~ie~~sNp~G~v~Dl~~I~~la~~~gi~  187 (436)
T PRK07812        123 NLFHYTLPKLGI---EVSFVE-D-----PDDLDAWRAAVRPNTK------AFFAETISNPQIDVLDIPGVAEVAHEAGVP  187 (436)
T ss_pred             HHHHHHhhcCeE---EEEEEC-C-----CCCHHHHHHhCCCCCe------EEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence            43    334566   777775 2     2389999998876543      788999999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc-ceEEEEeCch-hHHH-----hhcCCccCCCCCCCCC
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-CCCLWVKQPG-LLVK-----ALSTDPEYLKNKPSES  351 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~r~~~-~l~~-----~~~~~~~yl~~~~~~~  351 (499)
                      ++||++++......+    ..   .++|.++.+.||+++++.+ .|.+++.+.. .+..     .....++|........
T Consensus       188 liVD~t~a~~~~~~p----l~---~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (436)
T PRK07812        188 LIVDNTIATPYLIRP----LE---HGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAEL  260 (436)
T ss_pred             EEEECCCcccccCCc----hh---cCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhc
Confidence            999999976543221    11   1499999999999987633 4555554321 1100     0011122211000000


Q ss_pred             CCcc---cCC-CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC------------
Q 010842          352 NSVV---DFK-DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR------------  415 (499)
Q Consensus       352 ~~~~---~~~-~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~------------  415 (499)
                      +...   ... .+....|-.......|..++  |.+.+..++++..++|..+.+.|+++|.++-+.-|            
T Consensus       261 ~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~  338 (436)
T PRK07812        261 GPPAYALKARVQLLRDLGSAISPFNAFLIAQ--GLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAK  338 (436)
T ss_pred             chhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHH
Confidence            0000   000 00111233344556665554  55889999999999999999999999987544211            


Q ss_pred             ------CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc------CC---EEEEeee-----E-------CC--EEEEE
Q 010842          416 ------HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST------GR---VYLTHTI-----V-------GG--LYMLR  466 (499)
Q Consensus       416 ------~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~---~~~~~~~-----~-------~g--~~~lR  466 (499)
                            ..++++|.+.+.        .+...++.+.|.--      |.   .+..+..     .       .|  ...+|
T Consensus       339 ~~~~~g~gg~~sf~l~~~--------~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liR  410 (436)
T PRK07812        339 RLAPKGTGAVLSFELAGG--------VEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVR  410 (436)
T ss_pred             HhCcCCCceEEEEEecCC--------HHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEE
Confidence                  134778877532        12244555554211      11   0111110     0       12  35799


Q ss_pred             EeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          467 FAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       467 i~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +|++     -||++.+++.|.++.+..
T Consensus       411 lSvG-----lEd~~dli~dl~~Al~~~  432 (436)
T PRK07812        411 LAVG-----IEGIDDILADLEAGFAAA  432 (436)
T ss_pred             EEec-----cCCHHHHHHHHHHHHHhh
Confidence            9996     356777777777776654

>PRK07503 methionine gamma-lyase; Provisional

Probab=99.79  E-value=2.9e-17  Score=166.92  Aligned_cols=221  Identities=17%  Similarity=0.163  Sum_probs=158.4

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--  200 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--  200 (499)
                      ..|....+|+.    ++++.|.+..         +++++|+.|+..++.+...           ++..|+++...|..  
T Consensus        63 ~~p~~~~le~~----lA~l~g~~~~---------i~~~sG~~Al~~~l~~ll~-----------~Gd~Viv~~~~y~~t~  118 (403)
T PRK07503         63 SNPTLALLEQR----MASLEGGEAA---------VALASGMGAITATLWTLLR-----------PGDEVIVDQTLYGCTF  118 (403)
T ss_pred             CCchHHHHHHH----HHHHhCCCcE---------EEEcCHHHHHHHHHHHHcC-----------CCCEEEEccCccchHH
Confidence            45667777777    8999998654         8888999987777664321           56678888777654  


Q ss_pred             --HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          201 --FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       201 --~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                        +...+...|+   +++.++.+       |+++|+++++++++      +|++..++|++|.+.|+++|+++|+++|++
T Consensus       119 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i~~~tk------lV~le~p~NPtG~~~di~~I~~la~~~gi~  182 (403)
T PRK07503        119 AFLHHGLGEFGV---TVRHVDLT-------DPAALKAAISDKTR------MVYFETPANPNMRLVDIAAVAEIAHGAGAK  182 (403)
T ss_pred             HHHHHHHhhCCE---EEEEeCCC-------CHHHHHHhcCccCc------EEEEeCCCCCCCeeeCHHHHHHHHHHcCCE
Confidence              3345566788   88888753       78999999876544      788889999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      +++|++|+.+....    ..  + -.+|.++.+.+|+++++.+  +|+++ .+++...+......   ..          
T Consensus       183 lIvD~a~a~~~~~~----~l--~-~g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~~~l~~~~~---~~----------  241 (403)
T PRK07503        183 VVVDNTYCTPYLQR----PL--E-LGADLVVHSATKYLGGHGDITAGLVV-GGKALADRIRLEGL---KD----------  241 (403)
T ss_pred             EEEECCCcccccCC----ch--h-hCCCEEEccccccccCCCceeEEEEE-cCHHHHHHHHhhhH---Hh----------
Confidence            99999997653211    11  1 1489999999999997754  67666 45443322110000   00          


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                            ..+-+...+..|+.++.  .+.+..++++..+++..+.+.|+++|.++.+
T Consensus       242 ------~~g~~~s~~~a~l~l~~--L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V  289 (403)
T PRK07503        242 ------MTGAVMSPFDAFLLMRG--LKTLALRMDRHCASAQAVAEWLARHPAVELV  289 (403)
T ss_pred             ------CcCCCCCHHHHHHHHcC--cchHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence                  01223345666776664  4788888999999999999999999987644

>PRK15399 lysine decarboxylase LdcC; Provisional

Probab=99.79  E-value=2e-16  Score=166.50  Aligned_cols=299  Identities=17%  Similarity=0.203  Sum_probs=196.0

Q ss_pred             HHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCe
Q 010842          136 DWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANI  215 (499)
Q Consensus       136 ~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v  215 (499)
                      +..++.||.+.++        ++++|+|.+|..++.++..           ++..|++++++|.|+..++.+.|+   .+
T Consensus       202 ~~aA~~fgAd~ty--------fvvNGTS~~n~av~~a~~~-----------~Gd~VLvdRN~HKSv~~aLilsga---~P  259 (713)
T PRK15399        202 EYIARTFGAEQSY--------IVTNGTSTSNKIVGMYAAP-----------AGSTLLIDRNCHKSLAHLLMMSDV---VP  259 (713)
T ss_pred             HHHHHHhCCCcEE--------EEeCChHHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---ee
Confidence            5599999999987        8899999999988887653           678899999999999999999999   99


Q ss_pred             EEeeCCCCCC---CccCH-----HHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE-Eeecccc
Q 010842          216 RALPTSVDAN---FSLSP-----QLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV-HVDAAYA  286 (499)
Q Consensus       216 ~~v~~~~~~~---~~~d~-----~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l-hvD~A~g  286 (499)
                      ++++...+..   +.+++     +.++++|++... -.+|..+++|.+| ..|.+-++++|+++|   |+.+ |||+|||
T Consensus       260 VYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~-~~~p~~vvit~pT-YdGi~yd~~~I~~~~---g~~~ilvDEAhg  334 (713)
T PRK15399        260 IWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQ-AQWPVHAVITNST-YDGLLYNTDWIKQTL---DVPSIHFDSAWV  334 (713)
T ss_pred             EEecccccccCCcCCCChhhccHHHHHHHHHhCCC-cCCceEEEEECCC-CCceeeCHHHHHHHh---CCCEEEEeccch
Confidence            9987654321   23455     899999987543 2567888888885 589999999999999   6766 8999999


Q ss_pred             chhccCccchh--hhcCCCCCcee---EecccccccCCCcceEEEEeCch---hHHHhh----cCCccCCCCCCCCCCCc
Q 010842          287 GSACICPEFRH--YLNGIERVDSF---SFSPHKWLLSYLDCCCLWVKQPG---LLVKAL----STDPEYLKNKPSESNSV  354 (499)
Q Consensus       287 ~~~~~~~~~~~--~~~g~~~aDsi---~~~~hK~l~~p~~~g~l~~r~~~---~l~~~~----~~~~~yl~~~~~~~~~~  354 (499)
                      +...+.|.+++  .+.+...+|.+   +.|.||.|.+-..++++.++..-   .+.+++    +.+|.|+--        
T Consensus       335 ah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~~m~~STSPsY~Lm--------  406 (713)
T PRK15399        335 PYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIV--------  406 (713)
T ss_pred             hhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHHHHHcCCCcHHHHH--------
Confidence            98877765542  22232357877   99999999988899999997631   222222    122222211        


Q ss_pred             ccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEEcCCCc-eEEEEEecC
Q 010842          355 VDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPR------FEIVVPRHF-ALVCFRLNP  426 (499)
Q Consensus       355 ~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~------~~~~~~~~~-~~v~f~~~~  426 (499)
                                      ..+-.+.+.+. ..| ++++++..+++..+++.|.++++      |+++.+... ..-||.+.|
T Consensus       407 ----------------ASLD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p  469 (713)
T PRK15399        407 ----------------ASVETAAAMLRGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAP  469 (713)
T ss_pred             ----------------HHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCC
Confidence                            12222333332 233 55777788888888888887766      566542100 001121111


Q ss_pred             C-------------------C---------CCCc-chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHH
Q 010842          427 Y-------------------P---------HSGS-ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDER  477 (499)
Q Consensus       427 ~-------------------~---------~~~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~  477 (499)
                      .                   +         ...+ +...--...+.+.|.+.|+. +.-+   +...+=+.+ ++..|++
T Consensus       470 ~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~-~E~~---d~~~vL~l~-s~g~t~~  544 (713)
T PRK15399        470 GEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIV-VEKT---GPYNLLFLF-SIGIDKT  544 (713)
T ss_pred             CcccccccccccccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCE-EEec---CCCeEEEEe-CCCCCHH
Confidence            0                   0         0000 00011134455666667743 2222   223344444 4778999


Q ss_pred             HHHHHHHHHHHHHH
Q 010842          478 HVVAAWELIMEGAD  491 (499)
Q Consensus       478 di~~l~~~l~~~~~  491 (499)
                      ++++++++|.++-+
T Consensus       545 ~~~~L~~aL~~f~~  558 (713)
T PRK15399        545 KAMGLLRGLTEFKR  558 (713)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999998754

>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.79  E-value=4.3e-17  Score=166.19  Aligned_cols=308  Identities=13%  Similarity=0.135  Sum_probs=190.2

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|....||++    ++++.|.+..         +++++|++|+..++.+...           ++..|+++...|....
T Consensus        56 ~~pt~~~Le~~----lA~l~g~~~~---------l~~ssG~~Ai~~al~al~~-----------~Gd~Vl~~~~~Y~~t~  111 (425)
T PRK06084         56 MNPTNDVLEQR----VAALEGGVGA---------LAVASGMAAITYAIQTIAE-----------AGDNIVSVAKLYGGTY  111 (425)
T ss_pred             CCchHHHHHHH----HHHHhCCCce---------eEehhHHHHHHHHHHHHhC-----------CCCEEEEeCCCcchHH
Confidence            34666777777    8888886543         8899999998888876542           4556777777766444


Q ss_pred             HHHH----HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 KVCK----LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 ka~~----~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                      ..+.    ..|+   ++.+++.       .|+++|+++++++++      +|++..++|++|.+-|+++|+++|+++|++
T Consensus       112 ~~~~~~l~~~gi---~v~~~d~-------~d~e~le~ai~~~tk------lV~lesp~NPtG~v~dl~~I~~la~~~~i~  175 (425)
T PRK06084        112 NLLAHTLPRIGI---ETRFAAH-------DDIAALEALIDERTK------AVFCESIGNPAGNIIDIQALADAAHRHGVP  175 (425)
T ss_pred             HHHHHhccccee---EEEEECC-------CCHHHHHHHhccCCc------EEEEeCCCCCCCeecCHHHHHHHHHHcCCE
Confidence            4332    2455   5555542       489999999976544      788889999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHh------h-cCCccCCCCCCC
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKA------L-STDPEYLKNKPS  349 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~------~-~~~~~yl~~~~~  349 (499)
                      ++||++|+.+....|    ...   ++|.++.+.|||++.+..  .|++..++.......      + ...+.|..-...
T Consensus       176 vVvD~a~a~~~~~~p----~~~---gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (425)
T PRK06084        176 LIVDNTVATPVLCRP----FEH---GADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYT  248 (425)
T ss_pred             EEEECCCcccccCCh----hhc---CCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhh
Confidence            999999986543211    111   499999999999987743  444443332111010      0 111222110000


Q ss_pred             CCCCcccC-----CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-C---------
Q 010842          350 ESNSVVDF-----KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-P---------  414 (499)
Q Consensus       350 ~~~~~~~~-----~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~---------  414 (499)
                      ..-+...+     .......+.+......|+.++.  .+.+..++++..+++..+.+.|+++|.++-+. |         
T Consensus       249 ~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrg--l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~  326 (425)
T PRK06084        249 EAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQG--LETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHE  326 (425)
T ss_pred             hhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcC--cCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHH
Confidence            00000000     0001123444456667766654  48899999999999999999999999876442 2         


Q ss_pred             ------CC--ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc------CC---EEEEee-----eE-------CC--EE
Q 010842          415 ------RH--FALVCFRLNPYPHSGSADTEMLNRKLLDWVNST------GR---VYLTHT-----IV-------GG--LY  463 (499)
Q Consensus       415 ------~~--~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~---~~~~~~-----~~-------~g--~~  463 (499)
                            +.  .++++|.+.+.        .+...++.+.|.--      |.   .+..+.     ..       .|  ..
T Consensus       327 ~~~~~~~g~~gg~~s~~~~~~--------~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~  398 (425)
T PRK06084        327 LARRYMGGKPASILSFGIKGG--------QAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRD  398 (425)
T ss_pred             HHHHhCCCCcceEEEEEecCC--------HHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCC
Confidence                  11  34788887542        12234455554211      11   011111     00       11  35


Q ss_pred             EEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          464 MLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       464 ~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      .+|+|++     -||.+.+++.|.++.+.
T Consensus       399 liR~svG-----lEd~~dLi~dl~~Al~~  422 (425)
T PRK06084        399 MVRLSIG-----IEHIDDIIADLAQALDA  422 (425)
T ss_pred             eEEEEec-----cCCHHHHHHHHHHHHHh
Confidence            7999996     36777788888777654

>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional

Probab=99.79  E-value=8e-17  Score=164.90  Aligned_cols=327  Identities=11%  Similarity=0.062  Sum_probs=201.1

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc-cCCeEEEcCCCCchhH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN-MHKLVVYGSDQTHSTF  201 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g-~~~~~i~~s~~~H~s~  201 (499)
                      .++...++|++    +++++|.+.         .++++|||+|++.++.+....+...   .+ .++..|+++..+|.+.
T Consensus        61 ~G~~~~~fe~~----lA~~~g~~~---------~v~~~sGt~al~~aL~al~~~~~~~---~~~~pGd~VIv~~~t~~a~  124 (438)
T PRK15407         61 TGRFNDAFEKK----LAEFLGVRY---------ALLVNSGSSANLLAFSALTSPKLGD---RALKPGDEVITVAAGFPTT  124 (438)
T ss_pred             CChhHHHHHHH----HHHHhCCCe---------EEEECCHHHHHHHHHHHHhhccccc---cCCCCCCEEEECCCCcHHH
Confidence            46767778877    888888764         3899999999999888763221110   01 1567899999999999


Q ss_pred             HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842          202 AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV  281 (499)
Q Consensus       202 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv  281 (499)
                      ..++...|+   .++.++++.+ ++.+|+++|++++.++++      +|++++   ++|...++++|.++|+++|+++++
T Consensus       125 ~~~v~~~G~---~pv~vdvd~~-~~~id~~~le~~i~~~tk------aVi~~~---~~G~p~dl~~I~~la~~~gi~vIe  191 (438)
T PRK15407        125 VNPIIQNGL---VPVFVDVELP-TYNIDASLLEAAVSPKTK------AIMIAH---TLGNPFDLAAVKAFCDKHNLWLIE  191 (438)
T ss_pred             HHHHHHcCC---EEEEEecCCC-cCCcCHHHHHHHcCcCCe------EEEEeC---CCCChhhHHHHHHHHHHCCCEEEE
Confidence            999999999   9999998754 579999999999876543      566665   367788999999999999999999


Q ss_pred             eccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCC-------------C-
Q 010842          282 DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKN-------------K-  347 (499)
Q Consensus       282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~-------------~-  347 (499)
                      |+||+.+.......   ...+..+-.+++.+.|.+.+. +.|++++++++......... .+=..             . 
T Consensus       192 Daa~a~G~~~~g~~---~G~~gd~~~fSf~~~k~~~~g-eGG~l~t~d~~l~~~~~~~~-~~G~~~~~~~~~~~~~~~~~  266 (438)
T PRK15407        192 DNCDALGSTYDGRM---TGTFGDIATLSFYPAHHITMG-EGGAVFTNDPLLKKIIESFR-DWGRDCWCAPGCDNTCGKRF  266 (438)
T ss_pred             ECccchhhhcCCee---eeccCceEEEeCCCCCCcccc-CceEEEECCHHHHHHHHHHH-HhCccccccccccccccccc
Confidence            99998765432211   111223445556666766553 45888888876442221110 00000             0 


Q ss_pred             CCCCCC-cccCC-Cc-ccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe-EEEc-CCCc----e
Q 010842          348 PSESNS-VVDFK-DW-QVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRF-EIVV-PRHF----A  418 (499)
Q Consensus       348 ~~~~~~-~~~~~-~~-~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~-~~~~-~~~~----~  418 (499)
                      ....+. ...+. .+ ....|..++.-.+.+++-....+.+++++++..++++++.+.|..+++. .+.. ++..    .
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~  346 (438)
T PRK15407        267 GWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWF  346 (438)
T ss_pred             ccccccccccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEE
Confidence            000000 00000 00 0112333344444455544455889999999999999999999988753 2221 1121    1


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEE---E-eee----ECC----------------EEEEEEeccCCCC
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYL---T-HTI----VGG----------------LYMLRFAVGASLT  474 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~-~~~----~~g----------------~~~lRi~~~~~~~  474 (499)
                      .+.+.+.+..       .....++.+.|.++|+-.-   . +..    +..                ...+-+= +++..
T Consensus       347 ~~~i~~~~~~-------~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP-~~~~l  418 (438)
T PRK15407        347 GFPITVKEDA-------GFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIG-VYPGL  418 (438)
T ss_pred             EEEEEECCcC-------CCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEec-CCCCC
Confidence            2333343210       0113567777777776221   1 100    000                1112222 36778


Q ss_pred             cHHHHHHHHHHHHHHHH
Q 010842          475 DERHVVAAWELIMEGAD  491 (499)
Q Consensus       475 t~~di~~l~~~l~~~~~  491 (499)
                      |++|+++++++|+++.+
T Consensus       419 ~~~~v~~i~~~i~~~~~  435 (438)
T PRK15407        419 TEEMLDYVIEKIEEFFG  435 (438)
T ss_pred             CHHHHHHHHHHHHHHHh
Confidence            99999999999998764

>PRK07269 cystathionine gamma-synthase; Reviewed

Probab=99.79  E-value=1.4e-17  Score=166.61  Aligned_cols=234  Identities=15%  Similarity=0.160  Sum_probs=165.6

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF  201 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~  201 (499)
                      ...|...+||++    ++++.|.+.         +++++||++|+..++. +..           ++..|+++...+...
T Consensus        51 ~~~p~~~~le~~----lA~leg~~~---------~v~~~sG~aAi~~~l~-~l~-----------~GD~VI~~~~~yg~~  105 (364)
T PRK07269         51 TKNPTRAKLEET----LAAIESADY---------ALATSSGMSAIVLAFS-VFP-----------VGSKVVAVRDLYGGS  105 (364)
T ss_pred             CCCccHHHHHHH----HHHHhCCCe---------EEEeCCHHHHHHHHHH-HhC-----------CCCEEEEecCCcCch
Confidence            456778888888    788887543         4899999999887774 321           456677776655433


Q ss_pred             HHHHHHh-CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842          202 AKVCKLA-GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH  280 (499)
Q Consensus       202 ~ka~~~~-G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh  280 (499)
                      ...+... .-+  .   +.+    .|.+|+++++++|+++++      +|++..++|++|.+.|+++|+++|+++|++++
T Consensus       106 ~~~~~~~~~~~--~---~~~----~~~~d~~~l~~~i~~~Tk------lV~lesP~NPtg~~~di~~I~~la~~~gi~vv  170 (364)
T PRK07269        106 FRWFNQQEKEG--R---FHF----TYANTEEELIAAIEEDTD------IVYIETPTNPLMVEFDIEKVAKLAHAKGAKVI  170 (364)
T ss_pred             HHHHHHHHhcC--c---EEE----EecCCHHHHHHhcCcCce------EEEEECCCCCCCeeeCHHHHHHHHHHcCCEEE
Confidence            2222211 110  1   111    135689999999977654      89999999999999999999999999999999


Q ss_pred             eeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842          281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK  358 (499)
Q Consensus       281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  358 (499)
                      ||++|+......    ..-   ..+|.+++|.||+++++.+  .|++++++++...+..... .+               
T Consensus       171 vD~t~~~~~~~~----pl~---~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~-~~---------------  227 (364)
T PRK07269        171 VDNTFYSPIYQR----PIE---LGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNL-NT---------------  227 (364)
T ss_pred             EECCCcccccCC----chh---hCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHH-HH---------------
Confidence            999986643221    111   1499999999999998766  6777777665332221100 00               


Q ss_pred             CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEcCCCceEEEEEec
Q 010842          359 DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFE-IVVPRHFALVCFRLN  425 (499)
Q Consensus       359 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~~~~~v~f~~~  425 (499)
                           .|.....+..|..++.+  +.+..++++..+++.++.+.|+++|.++ +..|+..++++|.+.
T Consensus       228 -----~G~~~s~~~a~l~~~~L--~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~  288 (364)
T PRK07269        228 -----TGAVLSPFDSYLLMRGL--KTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVA  288 (364)
T ss_pred             -----hCCCCCHHHHHHHHcCC--CcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEEC
Confidence                 12233566777777655  6789999999999999999999999875 444777889999885

>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated

Probab=99.79  E-value=2.4e-17  Score=166.00  Aligned_cols=286  Identities=17%  Similarity=0.191  Sum_probs=188.6

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF  201 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~  201 (499)
                      ...|....||+.    ++++.|.+..         +++++|+.|+..++ .+..           ++..|+++...|...
T Consensus        47 ~~~p~~~~Le~~----la~l~g~~~a---------l~~~SG~~Al~~~l-~~l~-----------pGd~Vi~~~~~y~~t  101 (380)
T PRK06176         47 SGNPTRFALEEL----IADLEGGVKG---------FAFASGLAGIHAVF-SLFQ-----------SGDHVLLGDDVYGGT  101 (380)
T ss_pred             CCChhHHHHHHH----HHHHhCCCCE---------EEECCHHHHHHHHH-HHcC-----------CCCEEEEcCCChhHH
Confidence            455777788887    8999987654         88888888775433 3321           566788888777653


Q ss_pred             H----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842          202 A----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI  277 (499)
Q Consensus       202 ~----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~  277 (499)
                      .    +.+...|+   +++.++.       .|+++++++++++++      +|++..++|++|.+.|+++|+++|+++|+
T Consensus       102 ~~~~~~~~~~~gi---~v~~vd~-------~d~e~l~~ai~~~t~------lV~lesP~Nptg~~~di~~I~~la~~~gi  165 (380)
T PRK06176        102 FRLFDKVLVKNGL---SCTIIDT-------SDLSQIKKAIKPNTK------ALYLETPSNPLLKITDLAQCASVAKDHGL  165 (380)
T ss_pred             HHHHHHHHHhcCe---EEEEcCC-------CCHHHHHHhcCcCce------EEEEECCCCCCceecCHHHHHHHHHHcCC
Confidence            3    44556777   7777764       389999998876543      78889999999999999999999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV  355 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  355 (499)
                      +++||++|+......|    .  + ..+|.+++++||++++|.+  .|++..+++....+ +..    +..         
T Consensus       166 ~vivD~t~a~~~~~~p----~--~-~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~-~~~----~~~---------  224 (380)
T PRK06176        166 LTIVDNTFATPYYQNP----L--L-LGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQE-IAF----FQN---------  224 (380)
T ss_pred             EEEEECCccccccCCc----c--c-cCCCEEEecCceeccCCccceeeEEEecHHHHHHH-HHH----HHH---------
Confidence            9999999976432211    1  1 1489999999999998764  67777666543221 111    000         


Q ss_pred             cCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----------------Cce
Q 010842          356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----------------HFA  418 (499)
Q Consensus       356 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~  418 (499)
                             ..+....+...|..++  |.+.+..++++..+++..+.+.|++.|.++-+.-|                 ..+
T Consensus       225 -------~~G~~~~~~~~~l~~~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~  295 (380)
T PRK06176        225 -------AIGGVLGPQDSWLLQR--GIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSG  295 (380)
T ss_pred             -------HhcCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCce
Confidence                   0111122344565554  55778889999999999999999999988644221                 135


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhc------CC---EEEEeee-----E-------CC--EEEEEEeccCCCCc
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNST------GR---VYLTHTI-----V-------GG--LYMLRFAVGASLTD  475 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~---~~~~~~~-----~-------~g--~~~lRi~~~~~~~t  475 (499)
                      +++|.+..         .+...++++.|.--      |.   .+..+..     +       .|  .+.+|+|++     
T Consensus       296 ~~s~~~~~---------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG-----  361 (380)
T PRK06176        296 MLSFTLKN---------DSEAVAFVESLKLFILGESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVG-----  361 (380)
T ss_pred             EEEEEECC---------HHHHHHHHHcCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEec-----
Confidence            67787753         12234555554321      10   0111110     0       11  357999996     


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 010842          476 ERHVVAAWELIMEGADR  492 (499)
Q Consensus       476 ~~di~~l~~~l~~~~~~  492 (499)
                      -||++.+++.|.++.+.
T Consensus       362 lE~~~dli~dl~~Al~~  378 (380)
T PRK06176        362 IEHEQDLLEDLEQAFAK  378 (380)
T ss_pred             cCCHHHHHHHHHHHHhh
Confidence            35677777777776654

>PRK15481 transcriptional regulatory protein PtsJ; Provisional

Probab=99.79  E-value=4.7e-17  Score=167.76  Aligned_cols=303  Identities=14%  Similarity=0.064  Sum_probs=200.4

Q ss_pred             ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842          120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS  199 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~  199 (499)
                      .|....+..++.+.+.+|+.+..+.++        ..++|+|+++|+..++.+..+           ++..|++..+++.
T Consensus       116 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~--------~Iiit~G~~~al~~~~~~l~~-----------pgd~Vlv~~P~y~  176 (431)
T PRK15481        116 LYGDAPVSPELHAWAARWLRDDCPVAF--------EIDLTSGAIDAIERLLCAHLL-----------PGDSVAVEDPCFL  176 (431)
T ss_pred             hcCCcCCCHHHHHHHHHHHhhccCCcC--------eEEEecCcHHHHHHHHHHhCC-----------CCCEEEEeCCCcH
Confidence            344444556787787777765444332        358999999988877776543           5678999999999


Q ss_pred             hHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEe-cCCCcccccCChh---HHHHHHHHh
Q 010842          200 TFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCAT-VGTTSTTAVDNVE---PLAEVANEY  275 (499)
Q Consensus       200 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t-~gtt~~G~id~l~---~I~~ia~~~  275 (499)
                      .+...++..|+   +++.||++++   .+|+++|++++++.+      .+++++ .++||||.+-+.+   +|.++|+++
T Consensus       177 ~~~~~~~~~g~---~~~~v~~~~~---g~~~~~l~~~~~~~~------k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~  244 (431)
T PRK15481        177 SSINMLRYAGF---SASPVSVDAE---GMQPEKLERALAQGA------RAVILTPRAHNPTGCSLSARRAAALRNLLARY  244 (431)
T ss_pred             HHHHHHHHcCC---eEEeeccCCC---CCCHHHHHHHHhcCC------CEEEECCCCCCCCCccCCHHHHHHHHHHHHhc
Confidence            99999999999   9999999754   489999999886532      255555 8999999997765   999999999


Q ss_pred             -CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842          276 -GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV  354 (499)
Q Consensus       276 -~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  354 (499)
                       ++|+++|.+|+.+... + ....+.....--.+..++.|.++...-+|+++... ... +.+.....+...        
T Consensus       245 ~~~~ii~De~Y~~~~~~-~-~~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~~~-~~~-~~~~~~~~~~~~--------  312 (431)
T PRK15481        245 PQVLVIIDDHFALLSSS-P-YHSVIPQTTQRWALIRSVSKALGPDLRLAFVASDS-ATS-ARLRLRLNSGTQ--------  312 (431)
T ss_pred             CCceEEecCchhhhccC-C-CCCCCcCCCCCEEEEeeeccccCCCceeEEEeCCH-HHH-HHHHHHHhcccc--------
Confidence             9999999999866421 1 11111111112356678899999446688776543 222 222111011000        


Q ss_pred             ccCCCcccCCCCCCCcHHHHHHHHHhcH----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCC
Q 010842          355 VDFKDWQVGTGRRFKSLRLWMVLRSYGV----LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHS  430 (499)
Q Consensus       355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~  430 (499)
                                  ....+..+++...+..    +.+++..+...+..+.+.+.|++. ++++..+...+.+++++...   
T Consensus       313 ------------~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l~~~---  376 (431)
T PRK15481        313 ------------WVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPLDTD---  376 (431)
T ss_pred             ------------CCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEECCCC---
Confidence                        0123444444444422    235566777778888888889886 67654444555555555321   


Q ss_pred             CcchhHHHHHHHHHHHHhcCCEEEEeeeEC---CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          431 GSADTEMLNRKLLDWVNSTGRVYLTHTIVG---GLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       431 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                              ..++.+.+.++|+.+..+..+.   +..++|+++++  .++++++.+++.|+++..
T Consensus       377 --------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~--~~~~~i~~~~~~l~~~~~  430 (431)
T PRK15481        377 --------SQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST--LNDAEINRLAADLHQALN  430 (431)
T ss_pred             --------HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC--CChHHHHHHHHHHHHHhc
Confidence                    3456677777887766554442   13579999963  468999999999988753

>PRK08114 cystathionine beta-lyase; Provisional

Probab=99.79  E-value=2.9e-17  Score=164.49  Aligned_cols=290  Identities=13%  Similarity=0.126  Sum_probs=196.3

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF  201 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~  201 (499)
                      ...|-...+|+.    ++++-|...         ++++++|+.|+.+++.+...           ++..|+++...|..+
T Consensus        59 ~~nPt~~~le~~----la~LEg~~~---------a~~~~SGmaAi~~~~~~ll~-----------~GD~Vv~~~~~Yg~t  114 (395)
T PRK08114         59 RGTLTHFSLQEA----MCELEGGAG---------CALYPCGAAAVANAILAFVE-----------QGDHVLMTGTAYEPT  114 (395)
T ss_pred             CCChhHHHHHHH----HHHHhCCCe---------EEEEhHHHHHHHHHHHHHcC-----------CCCEEEEeCCCcHHH
Confidence            456888889988    888877654         48888899998877765532           567788888888776


Q ss_pred             HHHH----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC-
Q 010842          202 AKVC----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG-  276 (499)
Q Consensus       202 ~ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~-  276 (499)
                      ...+    ...|+   ++.+++.       .|.++++++|+++++      +|.+..++|++|.+.||++|+++||++| 
T Consensus       115 ~~l~~~~l~~~Gi---~v~~vd~-------~d~~~l~~~l~~~Tr------lV~~EtpsNp~~~v~DI~~Ia~ia~~~g~  178 (395)
T PRK08114        115 QDFCSKILSKLGV---TTTWFDP-------LIGADIAKLIQPNTK------VVFLESPGSITMEVHDVPAIVAAVRSVNP  178 (395)
T ss_pred             HHHHHHHHHhcCc---EEEEECC-------CCHHHHHHhcCCCce------EEEEECCCCCCCEeecHHHHHHHHHHhCC
Confidence            6554    45688   8888763       367899999977654      8999999999999999999999999985 


Q ss_pred             -CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC--cceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842          277 -IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL--DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS  353 (499)
Q Consensus       277 -~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~--~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~  353 (499)
                       +.++||++|+.+...-|    +-.   +||.++.+.|||++++.  .+|+++.+ ++.... +... .+          
T Consensus       179 g~~lvVDnT~a~p~~~~p----l~~---GaDivv~S~tKyl~Ghsdv~~G~v~~~-~~~~~~-l~~~-~~----------  238 (395)
T PRK08114        179 DAVIMIDNTWAAGVLFKA----LDF---GIDISIQAGTKYLVGHSDAMIGTAVAN-ARCWEQ-LREN-SY----------  238 (395)
T ss_pred             CCEEEEECCCccccccCH----HHc---CCcEEEEcCcccccCCCcceeEEEEcC-HHHHHH-HHHH-HH----------
Confidence             99999999987654222    112   49999999999999984  56766544 322211 1100 00          


Q ss_pred             cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cC-----C-----------C
Q 010842          354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VP-----R-----------H  416 (499)
Q Consensus       354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~-----~-----------~  416 (499)
                               ..|....+...|+.++  |.+.+.-++++..++|..+.++|+++|.++-+ .|     |           .
T Consensus       239 ---------~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~  307 (395)
T PRK08114        239 ---------LMGQMVDADTAYMTSR--GLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGS  307 (395)
T ss_pred             ---------hccCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCC
Confidence                     1122334566776655  45888899999999999999999999988643 22     1           2


Q ss_pred             ceEEEEEecCCCCCCcchhHHHHHHHHHHHHh--c----CCE--EEE---eeeE--------C--CEEEEEEeccCCCCc
Q 010842          417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNS--T----GRV--YLT---HTIV--------G--GLYMLRFAVGASLTD  475 (499)
Q Consensus       417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~--~----g~~--~~~---~~~~--------~--g~~~lRi~~~~~~~t  475 (499)
                      .++++|.+....  +    .+...++++.+.-  .    |.+  .+.   +...        .  ..+.+|+|++     
T Consensus       308 gg~~sf~l~~~~--~----~~~~~~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~~~~~~~~~~~~~~~liRlSvG-----  376 (395)
T PRK08114        308 SGLFSFVLKKKL--T----DEQLANYLDNFSLFSMAYSWGGFESLILANQPEEIAAIRPAGEVDFTGTLIRLHIG-----  376 (395)
T ss_pred             ceEEEEEecCcc--c----HHHHHHHHHhCCcceeecccCCccceeccCCchhhhccCChhHhcCCCCeEEEEec-----
Confidence            457888875410  0    1123344444321  0    100  011   0000        0  1157999996     


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 010842          476 ERHVVAAWELIMEGADRL  493 (499)
Q Consensus       476 ~~di~~l~~~l~~~~~~l  493 (499)
                      -||++.+++.|.+..+.+
T Consensus       377 lEd~~DLi~Dl~~Al~~~  394 (395)
T PRK08114        377 LEDVDDLIADLAAGFARI  394 (395)
T ss_pred             cCCHHHHHHHHHHHHHhh
Confidence            357778888887776643

>PRK15400 lysine decarboxylase CadA; Provisional

Probab=99.79  E-value=6.1e-17  Score=170.35  Aligned_cols=300  Identities=15%  Similarity=0.190  Sum_probs=197.7

Q ss_pred             HHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCe
Q 010842          136 DWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANI  215 (499)
Q Consensus       136 ~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v  215 (499)
                      +..++.||.+.++        ++++|+|.+|..++.++..           ++..|++++++|.|+..++.+.|+   .+
T Consensus       202 ~~AA~~fgAd~ty--------fvvNGTS~~n~av~~a~~~-----------~Gd~VLvdRN~HKSv~haLilsga---~P  259 (714)
T PRK15400        202 EYIARVFNADRSY--------MVTNGTSTANKIVGMYSAP-----------AGSTVLIDRNCHKSLTHLMMMSDV---TP  259 (714)
T ss_pred             HHHHHHhCCCcEE--------EEeCchHHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---eE
Confidence            5599999999987        8899999999988777643           677899999999999999999999   99


Q ss_pred             EEeeCCCCCC---CccC-----HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842          216 RALPTSVDAN---FSLS-----PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG  287 (499)
Q Consensus       216 ~~v~~~~~~~---~~~d-----~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~  287 (499)
                      ++++...+..   +.++     .+.++++|++... -.+|+.+++|.+ |..|.+-++++|+++|+.++  +|||.|||+
T Consensus       260 VYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~-ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvDEAwga  335 (714)
T PRK15400        260 IYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVP  335 (714)
T ss_pred             EEecccccccCCccCCCccccCHHHHHHHHHhCcc-ccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEEccchh
Confidence            9987654321   2345     8999999987543 256778888888 46899999999999999887  799999999


Q ss_pred             hhccCccchh--hhcCCCCC---c--eeEecccccccCCCcceEEEEeCc---hhHHHhh----cCCccCCCCCCCCCCC
Q 010842          288 SACICPEFRH--YLNGIERV---D--SFSFSPHKWLLSYLDCCCLWVKQP---GLLVKAL----STDPEYLKNKPSESNS  353 (499)
Q Consensus       288 ~~~~~~~~~~--~~~g~~~a---D--si~~~~hK~l~~p~~~g~l~~r~~---~~l~~~~----~~~~~yl~~~~~~~~~  353 (499)
                      ...+.|.++.  .+.  .++   |  .++.|.||.+.+-..++++.++..   +.+.+++    +.+|.|+.-       
T Consensus       336 h~~F~p~~~~~sam~--~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~a~~m~~STSPsY~l~-------  406 (714)
T PRK15400        336 YTNFSPIYEGKCGMS--GGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIV-------  406 (714)
T ss_pred             hhccCcccCCcChhh--cCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHHHHHHHcCCCcHHHHH-------
Confidence            8877776542  121  234   5  899999999988878888877553   1222222    122222211       


Q ss_pred             cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEEcCCCc-eEEEEE---
Q 010842          354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR------FEIVVPRHF-ALVCFR---  423 (499)
Q Consensus       354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~------~~~~~~~~~-~~v~f~---  423 (499)
                                       ..+-.+.+.+..+.-++.+++..+.+..+++.|.++++      |+++.+... ..-||.   
T Consensus       407 -----------------ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p  469 (714)
T PRK15400        407 -----------------ASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRS  469 (714)
T ss_pred             -----------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCc
Confidence                             12222333332222356778888888899999988877      777642210 001121   


Q ss_pred             -------------------------ecCCCCCCc-chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHH
Q 010842          424 -------------------------LNPYPHSGS-ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDER  477 (499)
Q Consensus       424 -------------------------~~~~~~~~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~  477 (499)
                                               ..+.+...+ .+..--...+.+.|.+.|++ +.-+   +...+=+.+ ++..|++
T Consensus       470 ~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~-~E~~---d~~~iLfl~-s~g~t~~  544 (714)
T PRK15400        470 DSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIV-VEKT---GPYNLLFLF-SIGIDKT  544 (714)
T ss_pred             cccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCE-EEec---CCCeEEEEe-CCCCCHH
Confidence                                     111000000 00111133455666666743 2222   223344445 4779999


Q ss_pred             HHHHHHHHHHHHHHH
Q 010842          478 HVVAAWELIMEGADR  492 (499)
Q Consensus       478 di~~l~~~l~~~~~~  492 (499)
                      +++.++++|.++-+.
T Consensus       545 ~~~~L~~aL~~f~~~  559 (714)
T PRK15400        545 KALSLLRALTDFKRA  559 (714)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999987543

>PRK08175 aminotransferase; Validated

Probab=99.79  E-value=3.3e-16  Score=159.63  Aligned_cols=335  Identities=13%  Similarity=0.083  Sum_probs=207.7

Q ss_pred             hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      ++.....+.....+.....|....+..++++++.+|+.+.+|.+-+.    ....++|+|+++++...+.+..+      
T Consensus        44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~i~~t~G~~~~l~~~~~~~~~------  113 (395)
T PRK08175         44 PPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDP----ESEAIVTIGSKEGLAHLMLATLD------  113 (395)
T ss_pred             CHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEccCcHHHHHHHHHHhCC------
Confidence            34344444433333333556666678899999999999887764210    01358899988887665544322      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                           ++..|++++++|..+...++..|+   +++.||+++++   .++++|++++++.   ...+.+|+.+.++|+||.
T Consensus       114 -----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~---~~~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~  179 (395)
T PRK08175        114 -----HGDTVLVPNPSYPIHIYGAVIAGA---QVRSVPLVEGV---DFFNELERAIRES---YPKPKMMILGFPSNPTAQ  179 (395)
T ss_pred             -----CCCEEEEcCCCCcchHHHHHHcCC---eEEEEecccCC---CcHHHHHHHHhhc---cCCceEEEEeCCCCCCCC
Confidence                 567798999999998888899999   99999998653   3588898887642   112347777888999999


Q ss_pred             cCCh---hHHHHHHHHhCCEEEeeccccchhccCccchhhh--cCCCCCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842          262 VDNV---EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL--NGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK  335 (499)
Q Consensus       262 id~l---~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~  335 (499)
                      +-+.   ++|+++|++||+++++|.+|+.+...........  .+......++.+..|.++.| ..+|++.. +++.. +
T Consensus       180 ~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~-~~~l~-~  257 (395)
T PRK08175        180 CVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG-NPELV-S  257 (395)
T ss_pred             CCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeC-CHHHH-H
Confidence            8666   7999999999999999999976543110111111  11111224568899999766 44787764 44332 2


Q ss_pred             hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                      .+.....+....                 .   ..+...++...+  ....+++..++..+.++++.+.|++. ++++..
T Consensus       258 ~~~~~~~~~~~~-----------------~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~  316 (395)
T PRK08175        258 ALARIKSYHDYG-----------------T---FTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEM  316 (395)
T ss_pred             HHHHHHhhcccC-----------------C---CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccC
Confidence            322211111000                 0   111222222222  23445666677778888999999887 676553


Q ss_pred             CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      +.....+++++.+.-  ..    ....++..++. +.|+.+..+..+.  +..++|++++   .+++.+.+.++.|.++.
T Consensus       317 p~~g~~i~i~l~~~~--~~----~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~---~~~~~~~~al~~l~~~l  387 (395)
T PRK08175        317 PKASMYVWAKIPEPY--AA----MGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI---ENRDRIRQAIRGIKAMF  387 (395)
T ss_pred             CCEEEEEEEECCccc--CC----CCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC---CCHHHHHHHHHHHHHHH
Confidence            445556666664321  00    01355666655 4575444433332  3468999985   46888999999888877


Q ss_pred             HH
Q 010842          491 DR  492 (499)
Q Consensus       491 ~~  492 (499)
                      ++
T Consensus       388 ~~  389 (395)
T PRK08175        388 RA  389 (395)
T ss_pred             Hh
Confidence            64

>PLN02242 methionine gamma-lyase

Probab=99.79  E-value=3.7e-17  Score=166.33  Aligned_cols=223  Identities=15%  Similarity=0.128  Sum_probs=155.9

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|...+||+.    +++++|.+..         ++++||++|+..++.+...           ++..|+++...+....
T Consensus        74 ~~Pt~~~LE~~----lA~l~g~~~~---------l~~~sG~~Ai~~al~al~~-----------~GD~Vl~~~~~Y~~~~  129 (418)
T PLN02242         74 FNPTVLNLGRQ----MAALEGTEAA---------YCTASGMSAISSVLLQLCS-----------SGGHVVASNTLYGGTH  129 (418)
T ss_pred             CChhHHHHHHH----HHHHhCCCeE---------EEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCcHHHHH
Confidence            46777788877    8999998764         8899999999988876643           5667888888776665


Q ss_pred             HHH-----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842          203 KVC-----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI  277 (499)
Q Consensus       203 ka~-----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~  277 (499)
                      ..+     +..|+   +++.++.       .|+++|+++|++.     ++.+|++..++|++|.+.|+++|+++|+++|+
T Consensus       130 ~~~~~~~~~~~G~---~~~~~d~-------~d~e~l~~~i~~~-----~tklV~lesp~NPtG~v~dl~~I~~la~~~gi  194 (418)
T PLN02242        130 ALLAHFLPRKCNI---TTTFVDI-------TDLEAVKKAVVPG-----KTKVLYFESISNPTLTVADIPELARIAHEKGV  194 (418)
T ss_pred             HHHHHhhhhccCc---eEEEcCC-------CCHHHHHHhcCcC-----CCEEEEEecCCCCCCcccCHHHHHHHHHHhCC
Confidence            554     34566   6666653       2889999988653     13478899999999999999999999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV  355 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  355 (499)
                      +++||.+|+.+. ..+    ...   .+|+++.+.+|+++++..  +|+++. +++.+...........           
T Consensus       195 ~livDea~~~~~-~~~----~~~---g~divv~S~SK~l~g~g~~~gG~iv~-~~~li~~l~~~~~~~~-----------  254 (418)
T PLN02242        195 TVVVDNTFAPMV-LSP----ARL---GADVVVHSISKFISGGADIIAGAVCG-PAELVNSMMDLHHGAL-----------  254 (418)
T ss_pred             EEEEECCCCccC-CCH----HHc---CCcEEEEeCccccCCCCCceEEEEEc-CHHHHHHHHHHhhhhh-----------
Confidence            999999996432 211    111   389999999999987754  466654 3333322211110000           


Q ss_pred             cCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       356 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                            ...+....+..+|..++  +...+..++++..++++++.+.|+++ ++++..
T Consensus       255 ------~~~g~~~~~~~A~l~~~--~l~tl~~r~~~~~~~a~~la~~L~~~-~~~V~y  303 (418)
T PLN02242        255 ------MLLGPTMNPKVAFELSE--RLPHLSLRMKEHCRRAMEYAKRMKEL-GLKVIY  303 (418)
T ss_pred             ------hccCCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhC-CCEEEC
Confidence                  00111223444555444  45677788899999999999999998 477764

>PRK02731 histidinol-phosphate aminotransferase; Validated

Probab=99.79  E-value=1.4e-16  Score=160.81  Aligned_cols=288  Identities=12%  Similarity=0.026  Sum_probs=191.1

Q ss_pred             HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC
Q 010842          134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA  213 (499)
Q Consensus       134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~  213 (499)
                      +.+.+++++|.+.+       ..++|+|+++++...+.+..+           ++..|+++.+.|..+...+...|+   
T Consensus        72 lr~~ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~l~~-----------~gd~vl~~~p~y~~~~~~~~~~g~---  130 (367)
T PRK02731         72 LKAALAEKFGVDPE-------RIILGNGSDEILELLARAYLG-----------PGDEVIYSEHGFAVYPIAAQAVGA---  130 (367)
T ss_pred             HHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEecCCHHHHHHHHHHcCC---
Confidence            33447777888654       357888888776554443321           456788888888888888888999   


Q ss_pred             CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh--CCEEEeeccccchhcc
Q 010842          214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY--GIWVHVDAAYAGSACI  291 (499)
Q Consensus       214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~--~~~lhvD~A~g~~~~~  291 (499)
                      +++.+|.+   ++.+|+++|++.++++      +.+|+++.++|+||.+-|.++|.++++.+  |+|+++|++|..+...
T Consensus       131 ~~~~~~~~---~~~~~~~~l~~~~~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~  201 (367)
T PRK02731        131 KPVEVPAK---DYGHDLDAMLAAVTPR------TRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRR  201 (367)
T ss_pred             eEEEeccc---CCCCCHHHHHHHhCCC------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccC
Confidence            99999884   3689999999988643      33777889999999999999999999875  8999999999765431


Q ss_pred             Cccch--hhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC
Q 010842          292 CPEFR--HYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF  368 (499)
Q Consensus       292 ~~~~~--~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~  368 (499)
                      .+...  ..... ..-..++.+..|.++.| ..+|+++.+++ .. +.+......                +  .    .
T Consensus       202 ~~~~~~~~~~~~-~~~~i~~~S~SK~~g~~G~RiG~l~~~~~-~~-~~l~~~~~~----------------~--~----~  256 (367)
T PRK02731        202 KDYEDGLELVAK-FPNVVVTRTFSKAYGLAGLRVGYGIAPPE-II-DALNRVRQP----------------F--N----V  256 (367)
T ss_pred             cCcccHHHHHhh-cCCEEEEeeehHhhcCcccceeeeeCCHH-HH-HHHHHccCC----------------C--C----C
Confidence            11111  11111 11224555778987644 56789887542 22 222211000                0  0    1


Q ss_pred             CcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH
Q 010842          369 KSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN  447 (499)
Q Consensus       369 ~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~  447 (499)
                      ..+..+++...+. .+.+++..++..++.+.+.+.|++. ++.+. ++..+.+++++.+..         ...++.+.|.
T Consensus       257 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~i~~~~~~---------~~~~~~~~L~  325 (367)
T PRK02731        257 NSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL-GLEYI-PSVGNFILVDFDDGK---------DAAEAYQALL  325 (367)
T ss_pred             CHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCceEEEEECCCCC---------CHHHHHHHHH
Confidence            2345555555554 3446677777788888999999887 77665 556677777763211         1456777787


Q ss_pred             hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          448 STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       448 ~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      ++|+.+.....+....++|+++.    +.+++++++++|+++.+
T Consensus       326 ~~gI~v~~~~~~~~~~~iRis~~----~~~e~~~l~~aL~~~~~  365 (367)
T PRK02731        326 KRGVIVRPVAGYGLPNALRITIG----TEEENRRFLAALKEFLA  365 (367)
T ss_pred             HCCEEEEeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHh
Confidence            88865444333332468999984    67899999999988753

>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.79  E-value=2.8e-17  Score=167.98  Aligned_cols=239  Identities=16%  Similarity=0.138  Sum_probs=162.4

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      .+|....+|++    ++++.|.+..         +++++|+.|+..++.+...           ++..|+++...|....
T Consensus        61 ~~p~~~~le~~----lA~l~g~~~a---------l~~~SG~~Ai~~al~all~-----------pGd~VIv~~~~y~~t~  116 (427)
T PRK05994         61 TNPTNAVLEER----VAALEGGTAA---------LAVASGHAAQFLVFHTLLQ-----------PGDEFIAARKLYGGSI  116 (427)
T ss_pred             CCccHHHHHHH----HHHHhCCCcE---------EEEcCHHHHHHHHHHHHhC-----------CCCEEEEecCcchhHH
Confidence            34666777777    8899987653         8999999999988876532           5667888888887543


Q ss_pred             ----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 ----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 ----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                          ..+...|+   .++.++.+       |+++++++++++++      +|++..++|++|.+-|+++|+++|+++|++
T Consensus       117 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~ai~~~tk------lV~vesp~NptG~v~dl~~I~~la~~~gi~  180 (427)
T PRK05994        117 NQFGHAFKSFGW---QVRWADAD-------DPASFERAITPRTK------AIFIESIANPGGTVTDIAAIAEVAHRAGLP  180 (427)
T ss_pred             HHHHHHHHhcCc---EEEEECCC-------CHHHHHHhcCcCCe------EEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence                34566788   88888642       78999998876443      788899999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc-ceEEEEeCch-hHHHhhcCCccCCCCCCCCCCCc--
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-CCCLWVKQPG-LLVKALSTDPEYLKNKPSESNSV--  354 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~r~~~-~l~~~~~~~~~yl~~~~~~~~~~--  354 (499)
                      +++|++|+.+....|    ..   .++|.++.+.||+++.+.+ .|.+++.... .+..  .....++.......++.  
T Consensus       181 livD~a~a~~~~~~p----l~---~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~--~k~~~~~~~~~~~~~~~~~  251 (427)
T PRK05994        181 LIVDNTLASPYLIRP----IE---HGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSK--SGKYPMLSEPRPEYHGLVL  251 (427)
T ss_pred             EEEECCccccccCCc----cc---cCCcEEEEcCccccCCCCCcEEEEEEeCCcccccc--ccccccccCCcchhhhhhH
Confidence            999999976532211    11   2499999999999997754 4545553221 1100  00011222110000000  


Q ss_pred             c-cCC----------CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          355 V-DFK----------DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       355 ~-~~~----------~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                      . ++.          ...-..|.....+..|+.++.  .+.+..++++..+++.++.+.|+++|.++-+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~--l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v  318 (427)
T PRK05994        252 HETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTG--IETLPLRMQRHSDNALAVAEWLKGHPKVSWV  318 (427)
T ss_pred             HHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcC--cccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence            0 000          000112334456667766654  4889999999999999999999999987643

>PRK08045 cystathionine gamma-synthase; Provisional

Probab=99.79  E-value=4.9e-17  Score=164.00  Aligned_cols=292  Identities=16%  Similarity=0.154  Sum_probs=191.2

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|....+|+.    ++++.|.+.         .++++||++|+..++.+...           ++..|+++...|.+..
T Consensus        50 ~~pt~~~L~~~----lA~l~g~~~---------~i~~~sg~~Ai~~~l~~l~~-----------~GD~Vl~~~~~y~~~~  105 (386)
T PRK08045         50 GNPTRDVVQRA----LAELEGGAG---------AVLTNTGMSAIHLVTTVFLK-----------PGDLLVAPHDCYGGSY  105 (386)
T ss_pred             CCccHHHHHHH----HHHHhCCCe---------EEEECCHHHHHHHHHHHHcC-----------CCCEEEEcCCCcHHHH
Confidence            34566667766    888888532         48999999988877765432           5677888888887644


Q ss_pred             HHH-HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842          203 KVC-KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV  281 (499)
Q Consensus       203 ka~-~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv  281 (499)
                      ..+ .+.+.+.-.+..++       ..|+++++++++++++      +|++..++|++|.+-|+++|+++|+++|++++|
T Consensus       106 ~~~~~~~~~~gi~v~~vd-------~~d~e~l~~~l~~~tk------lV~l~sP~NPtG~v~di~~I~~ia~~~g~~viv  172 (386)
T PRK08045        106 RLFDSLAKRGCYRVLFVD-------QGDEQALRAALAEKPK------LVLVESPSNPLLRVVDIAKICHLAREAGAVSVV  172 (386)
T ss_pred             HHHHHHHhhCCeEEEEeC-------CCCHHHHHHhcccCCe------EEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence            333 23222111455542       3589999998865443      788899999999999999999999999999999


Q ss_pred             eccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842          282 DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD  359 (499)
Q Consensus       282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  359 (499)
                      |++|+.+....|    +..   .+|.++.+.|||++++.+  .|++..++++.. +.+.....++               
T Consensus       173 Deay~~~~~~~p----l~~---gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~-~~l~~~~~~~---------------  229 (386)
T PRK08045        173 DNTFLSPALQNP----LAL---GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVV-TELAWWANNI---------------  229 (386)
T ss_pred             ECCCCccccCCc----hhh---CCCEEEeecceeccCCCCceeEEEEeCcHHHH-HHHHHHHHhc---------------
Confidence            999977543211    111   489999999999998766  677766665432 2221111111               


Q ss_pred             cccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cC-----C-----------CceEEEE
Q 010842          360 WQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VP-----R-----------HFALVCF  422 (499)
Q Consensus       360 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~-----~-----------~~~~v~f  422 (499)
                           +-...++..|+.++.+  +.+..++++..+++..+.+.|+++|.++-+ .|     |           ..++++|
T Consensus       230 -----g~~~~p~~~~l~~rgl--~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~  302 (386)
T PRK08045        230 -----GVTGGAFDSYLLLRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSF  302 (386)
T ss_pred             -----CCCCCHHHHHHHHhhh--ccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEE
Confidence                 1112456778777765  668999999999999999999999988644 22     1           1347888


Q ss_pred             EecCCCCCCcchhHHHHHHHHHHHHhcC------C---EEEEee-----eE-------CC--EEEEEEeccCCCCcHHHH
Q 010842          423 RLNPYPHSGSADTEMLNRKLLDWVNSTG------R---VYLTHT-----IV-------GG--LYMLRFAVGASLTDERHV  479 (499)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g------~---~~~~~~-----~~-------~g--~~~lRi~~~~~~~t~~di  479 (499)
                      .++..        .+...++.+.|.--.      .   .+..+.     ..       .|  .+.+|+|++     -||+
T Consensus       303 ~~~~~--------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svG-----lE~~  369 (386)
T PRK08045        303 ELDGD--------EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTG-----IEDG  369 (386)
T ss_pred             EecCc--------HHHHHHHHHhccceeEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeC-----cCCH
Confidence            87531        122345555543111      0   000010     00       12  357999996     3567


Q ss_pred             HHHHHHHHHHHHHHh
Q 010842          480 VAAWELIMEGADRLF  494 (499)
Q Consensus       480 ~~l~~~l~~~~~~l~  494 (499)
                      +.+++.|.+..+...
T Consensus       370 ~dl~~dl~~al~~~~  384 (386)
T PRK08045        370 EDLIADLENGFRAAN  384 (386)
T ss_pred             HHHHHHHHHHHHHhh
Confidence            777777777766554

>PRK08247 cystathionine gamma-synthase; Reviewed

Probab=99.79  E-value=2.9e-17  Score=165.14  Aligned_cols=232  Identities=18%  Similarity=0.217  Sum_probs=164.8

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--  200 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--  200 (499)
                      ..|...+||+.    ++++.|.+..         ++++||++|+..++ ....           ++..|+++...+.+  
T Consensus        50 ~~pt~~~le~~----la~l~g~~~~---------~~~~sG~~ai~~~~-~ll~-----------~Gd~Vl~~~~~y~~t~  104 (366)
T PRK08247         50 GNPTRGVLEQA----IADLEGGDQG---------FACSSGMAAIQLVM-SLFR-----------SGDELIVSSDLYGGTY  104 (366)
T ss_pred             CCchHHHHHHH----HHHHhCCCcE---------EEEcCHHHHHHHHH-HHhC-----------CCCEEEEecCCcCcHH
Confidence            34666777777    9999998764         88999998876543 2221           45677788777765  


Q ss_pred             --HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          201 --FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       201 --~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                        +.+.+...|+   +++.++.       .|+++|+++++++++      +|++..++|++|.+.++++|+++|+++|++
T Consensus       105 ~~~~~~~~~~G~---~v~~vd~-------~d~~~l~~~i~~~tk------lv~le~P~NP~~~~~dl~~I~~la~~~g~~  168 (366)
T PRK08247        105 RLFEEHWKKWNV---RFVYVNT-------ASLKAIEQAITPNTK------AIFIETPTNPLMQETDIAAIAKIAKKHGLL  168 (366)
T ss_pred             HHHHHHhhccCc---eEEEECC-------CCHHHHHHhcccCce------EEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence              3445566788   8888864       388999999876543      788899999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      +++|.+|+......|    ..   .++|.++.+.+|+++++.+  .|++..+++... +.+.....+.            
T Consensus       169 lIvD~t~~~~~~~~p----~~---~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~-~~~~~~~~~~------------  228 (366)
T PRK08247        169 LIVDNTFYTPVLQRP----LE---EGADIVIHSATKYLGGHNDVLAGLVVAKGQELC-ERLAYYQNAA------------  228 (366)
T ss_pred             EEEECCCccccccCc----hh---cCCcEEEeecceeccCCCceeeeEEecChHHHH-HHHHHHHHhc------------
Confidence            999999965433222    11   2489999999999987654  566665544332 2211100010            


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CCCceEEEEEec
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PRHFALVCFRLN  425 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~~~v~f~~~  425 (499)
                              +........|+.++.+  +.+..++++..++++.+.+.|+++|++..+. |+..++++|.+.
T Consensus       229 --------g~~~s~~~a~l~~~~l--~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~  288 (366)
T PRK08247        229 --------GAVLSPFDSWLLIRGM--KTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQ  288 (366)
T ss_pred             --------CCCCChHHHHHHHhcc--CcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEEC
Confidence                    1111234566666644  6777888899999999999999999987544 447788999774

>PRK13578 ornithine decarboxylase; Provisional

Probab=99.79  E-value=1.2e-16  Score=168.30  Aligned_cols=230  Identities=17%  Similarity=0.084  Sum_probs=161.5

Q ss_pred             HHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH-HHHhCCCCCC
Q 010842          136 DWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV-CKLAGVSPAN  214 (499)
Q Consensus       136 ~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka-~~~~G~g~~~  214 (499)
                      +..+++||.+.++        ++++|+|.+|..++.++..           ++..|++.+++|.|+..+ +.+.|+   .
T Consensus       181 ~~AA~~fgAd~ty--------FlvNGTS~gn~a~i~a~~~-----------~Gd~VLvdRN~HKSv~hgaLiLsGa---~  238 (720)
T PRK13578        181 KHAAKVFNADKTY--------FVLNGTSASNKVVTNALLT-----------PGDLVLFDRNNHKSNHHGALIQAGA---T  238 (720)
T ss_pred             HHHHHHhCCCceE--------EEeCChhHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHHcCC---e
Confidence            5599999999987        8899999999988887653           678899999999999996 899999   9


Q ss_pred             eEEeeCCCCCC---CccCHH-----HHHHHHHHH-H--HcCCcc-EEEEEecCCCcccccCChhHHHHH-HHHhCCEEEe
Q 010842          215 IRALPTSVDAN---FSLSPQ-----LLRRAVEAD-V--EAGLVP-LFLCATVGTTSTTAVDNVEPLAEV-ANEYGIWVHV  281 (499)
Q Consensus       215 v~~v~~~~~~~---~~~d~~-----~L~~~i~~~-~--~~g~~p-~~vv~t~gtt~~G~id~l~~I~~i-a~~~~~~lhv  281 (499)
                      +++++...+..   +.++++     .++++|++. .  +...+| .++++|.+| ..|.+-++++|+++ |+.++ .+||
T Consensus       239 PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT-YdG~~ydi~~I~~~~~h~~~-~llv  316 (720)
T PRK13578        239 PVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGT-YDGTIYNARQVVDKIGHLCD-YILF  316 (720)
T ss_pred             EEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCC-CcceeecHHHHHHHhhccCC-cEEE
Confidence            99987654321   234654     489988765 1  122355 567777765 58999999999998 78888 9999


Q ss_pred             eccccchhccCccchhh--hcCCCCCc----eeEecccccccCCCcceEEEEeCch-----------hHHHhh----cCC
Q 010842          282 DAAYAGSACICPEFRHY--LNGIERVD----SFSFSPHKWLLSYLDCCCLWVKQPG-----------LLVKAL----STD  340 (499)
Q Consensus       282 D~A~g~~~~~~~~~~~~--~~g~~~aD----si~~~~hK~l~~p~~~g~l~~r~~~-----------~l~~~~----~~~  340 (499)
                      |.|||+...+.|.++.+  ...-.++|    .++-|.||.|.+-..++++++++..           .+.+++    +.+
T Consensus       317 DEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTS  396 (720)
T PRK13578        317 DSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTS  396 (720)
T ss_pred             eCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHHHHcCCC
Confidence            99999998777754332  11123588    9999999999888889999987632           222222    122


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH-hcCCCeEEEc
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFV-KSDPRFEIVV  413 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L-~~~~~~~~~~  413 (499)
                      |.|+.-                        ..+-.+-+.+-.+.-++++++..+++..+++.| +..++|+++.
T Consensus       397 PsY~Lm------------------------ASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~  446 (720)
T PRK13578        397 PFYPLF------------------------AALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFI  446 (720)
T ss_pred             hHHHHH------------------------HHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecc
Confidence            222110                        111121222211122556777778888888888 7777888774

>PRK05166 histidinol-phosphate aminotransferase; Provisional

Probab=99.78  E-value=1.5e-16  Score=160.72  Aligned_cols=287  Identities=14%  Similarity=0.080  Sum_probs=189.2

Q ss_pred             HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC
Q 010842          134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA  213 (499)
Q Consensus       134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~  213 (499)
                      +++++++++|.+.+       ..++|+|+++++...+.+..+           ++..|++..++|..+...++..|+   
T Consensus        76 lr~~ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~vli~~P~y~~~~~~~~~~g~---  134 (371)
T PRK05166         76 LREAIAARTGVPAD-------RIILGNGSEDLIAVICRAVLR-----------PGDRVVTLYPSFPLHEDYPTMMGA---  134 (371)
T ss_pred             HHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC---
Confidence            44557888888654       468999999887666554421           566788889999999999999999   


Q ss_pred             CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH--hCCEEEeeccccchhcc
Q 010842          214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE--YGIWVHVDAAYAGSACI  291 (499)
Q Consensus       214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~--~~~~lhvD~A~g~~~~~  291 (499)
                      +++.+|.+++  +.+|+++|++.++++++      +|+++.++|+||.+-+.+++.++++.  +++++++|++|+.+.. 
T Consensus       135 ~~~~v~~~~~--~~~~~~~l~~~~~~~~~------~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~-  205 (371)
T PRK05166        135 RVERVTVTPD--LGFDLDALCAAVARAPR------MLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAA-  205 (371)
T ss_pred             eEEEeecCCC--CCCCHHHHHHhhhcCCC------EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcC-
Confidence            9999998753  58999999998866443      67789999999999888777777664  4799999999976652 


Q ss_pred             Cccchhh---hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842          292 CPEFRHY---LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR  367 (499)
Q Consensus       292 ~~~~~~~---~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~  367 (499)
                      .......   ......--.+..+..|.++.| .-.|++++.++... +.+.....+. .                     
T Consensus       206 ~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~-~~~~~~~~~~-~---------------------  262 (371)
T PRK05166        206 GDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELV-GLLDRVRTPF-N---------------------  262 (371)
T ss_pred             CcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHH-HHHHHhccCC-C---------------------
Confidence            1111111   111111125667889999844 66888777665433 2222111000 0                     


Q ss_pred             CCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHH
Q 010842          368 FKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWV  446 (499)
Q Consensus       368 ~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l  446 (499)
                      ...+...+++..+ ..+.+++..+...+..+++.+.|++. ++++. ++..+.+.++... .          ..++.+.|
T Consensus       263 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-p~~g~fl~~~~~~-~----------~~~l~~~l  329 (371)
T PRK05166        263 VNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM-GYRIA-PSRANFLFFDARR-P----------ASAVAEAL  329 (371)
T ss_pred             CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-cCeeC-CCcCCEEEEeCCC-C----------HHHHHHHH
Confidence            0122323333333 23456777777788888899999987 67653 5555555554321 1          35677788


Q ss_pred             HhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          447 NSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       447 ~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      .++|+.+..+.......++|++++    +.++.+++.++|+.+.
T Consensus       330 ~~~gi~v~p~~~~~~~~~iRi~~~----~~~~~~~l~~~l~~i~  369 (371)
T PRK05166        330 LRQGVIVKPWKQPGFETFIRVSIG----SPEENDHFVAALDKVL  369 (371)
T ss_pred             HHCCeEEecCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHHh
Confidence            888865443322334578999996    5677888888887653

>PRK07908 hypothetical protein; Provisional

Probab=99.78  E-value=1e-16  Score=160.70  Aligned_cols=304  Identities=13%  Similarity=0.071  Sum_probs=193.3

Q ss_pred             hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      +|..+.+.+...++. ...|....+...+.+.    +++.+|.+++       ..++|+|+++++..++. . .      
T Consensus        36 ~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~a----ia~~~~~~~~-------~I~it~Ga~~al~~~~~-l-~------   95 (349)
T PRK07908         36 PPEWLRERLAARLGD-LAAYPSTEDERRARAA----VAARHGRTPD-------EVLLLAGAAEGFALLAR-L-R------   95 (349)
T ss_pred             CCHHHHHHHHHHhhH-hhcCCCccchHHHHHH----HHHHhCcChh-------hEEECCCHHHHHHHHHh-c-C------
Confidence            444455555554432 1234333344555554    6666787654       46899999998876555 1 1      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                           ++ .+++..+++......++..|+   +++.+|++++  |.+|+++++    +.      +.+++++.++||||.
T Consensus        96 -----~~-~viv~~P~y~~~~~~~~~~G~---~i~~v~~~~~--~~~d~~~l~----~~------~~~i~l~np~NPTG~  154 (349)
T PRK07908         96 -----PR-RAAVVHPSFTEPEAALRAAGI---PVHRVVLDPP--FRLDPAAVP----DD------ADLVVIGNPTNPTSV  154 (349)
T ss_pred             -----CC-eEEEeCCCChHHHHHHHHcCC---EEEeeccCcc--cCcChhHhc----cC------CCEEEEcCCCCCCCC
Confidence                 22 244456778778888899999   9999998753  689998653    22      236778999999999


Q ss_pred             cCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEe-ccccccc-CCCcceEEEEeCchhHHHhhcC
Q 010842          262 VDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSF-SPHKWLL-SYLDCCCLWVKQPGLLVKALST  339 (499)
Q Consensus       262 id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~-~~hK~l~-~p~~~g~l~~r~~~~l~~~~~~  339 (499)
                      +-+.++|.++|+ ++.++++|++|+.+. .. ....... ...-+++.+ +.+|.++ ....+|+++.+. +.+ +.+..
T Consensus       155 ~~~~~~l~~l~~-~~~~iIvDe~y~~~~-~~-~~~~l~~-~~~~~~i~i~S~SK~~~l~GlRiG~~~~~~-~~~-~~~~~  228 (349)
T PRK07908        155 LHPAEQLLALRR-PGRILVVDEAFADAV-PG-EPESLAG-DDLPGVLVLRSLTKTWSLAGLRVGYALGAP-DVL-ARLTR  228 (349)
T ss_pred             CcCHHHHHHHHh-cCCEEEEECcchhhc-cC-Ccccccc-ccCCCEEEEeecccccCCccceeeeeecCH-HHH-HHHHh
Confidence            999999999996 488999999997642 11 1111111 112345555 8899887 446689988643 333 22221


Q ss_pred             CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC
Q 010842          340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH  416 (499)
Q Consensus       340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~  416 (499)
                      .....                .      ...+...+....+   +.+.+++..++..++++++.+.|++. ++++..++.
T Consensus       229 ~~~~~----------------~------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~  285 (349)
T PRK07908        229 GRAHW----------------P------VGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GARVVDPAA  285 (349)
T ss_pred             cCCCC----------------C------ccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCCC
Confidence            10000                0      0112222222211   23456677778888889999999987 788776566


Q ss_pred             ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      .+.+++++.+            ...+.+.+.++|+.+..+..+.  +..++|+++.    +++++++++++|+++..
T Consensus       286 g~~~~~~~~~------------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~----~~~~~~~l~~al~~~~~  346 (349)
T PRK07908        286 APFVLVRVPD------------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR----PRAEVPVLVQALAEILK  346 (349)
T ss_pred             ceEEEEECCc------------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC----CCccHHHHHHHHHHHHh
Confidence            6666666542            2456667777786555444443  3578999994    67899999999988643

>PRK04635 histidinol-phosphate aminotransferase; Provisional

Probab=99.78  E-value=3.3e-17  Score=164.48  Aligned_cols=284  Identities=11%  Similarity=0.063  Sum_probs=187.3

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCC-eEEEcCCCCchhHHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHK-LVVYGSDQTHSTFAKVC  205 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~-~~i~~s~~~H~s~~ka~  205 (499)
                      ..++.++    +++.+|.+.+       ..++|+|+++++..++.+...           ++ ..|+++.+++..+...+
T Consensus        62 ~~~Lr~a----ia~~~~~~~~-------~I~it~Gs~~~i~~~~~~~~~-----------~g~d~vlv~~P~y~~y~~~~  119 (354)
T PRK04635         62 PPELINA----YSAYAGVAPE-------QILTSRGADEAIELLIRAFCE-----------PGQDSIACFGPTYGMYAISA  119 (354)
T ss_pred             HHHHHHH----HHHHhCcCHH-------HEEEeCCHHHHHHHHHHHhcC-----------CCCCeEEEcCCChHHHHHHH
Confidence            4555555    7777898765       468999999988877765432           34 67888888998888999


Q ss_pred             HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh-CCEEEeecc
Q 010842          206 KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY-GIWVHVDAA  284 (499)
Q Consensus       206 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~-~~~lhvD~A  284 (499)
                      +..|+   +++.||++.  +|.+|++.+++ + ++      +.+|+++.++||||.+-+.+++.++++.. ++++++|++
T Consensus       120 ~~~g~---~v~~v~~~~--~~~~~~~~l~~-~-~~------~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDea  186 (354)
T PRK04635        120 ETFNV---GVKALPLTA--DYQLPLDYIEQ-L-DG------AKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEA  186 (354)
T ss_pred             HHcCC---EEEEEecCC--CCCCCHHHHHh-c-cC------CCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCc
Confidence            99999   999999874  36899998873 3 22      33788899999999999999999998873 799999999


Q ss_pred             ccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCccc
Q 010842          285 YAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQV  362 (499)
Q Consensus       285 ~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~  362 (499)
                      |..+... ............. .+..+.+|+++.| ..+|+++.+. +.+ +.+.. ...|                   
T Consensus       187 y~~~~~~-~s~~~~~~~~~~~-iv~~S~SK~~~l~GlRlG~~i~~~-~~~-~~l~~~~~~~-------------------  243 (354)
T PRK04635        187 YIEFCPE-YSVADLLASYPNL-VVLRTLSKAFALAGARCGFTLANE-ELI-EILMRVIAPY-------------------  243 (354)
T ss_pred             hHhhccC-cchHHHHhhCCCE-EEEechHHHhhhhHHHHhhhhCCH-HHH-HHHHhhcCCC-------------------
Confidence            9765311 1111111111111 4567889998744 5578887643 322 22211 1111                   


Q ss_pred             CCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHH
Q 010842          363 GTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLN  439 (499)
Q Consensus       363 ~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~  439 (499)
                          ........+++..+   |.+.+++..++..+.++++.+.|++++++++. ++..+.+.+++..            .
T Consensus       244 ----~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~g~f~~~~~~~------------~  306 (354)
T PRK04635        244 ----PVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVL-EGNGNYVLAKFDD------------V  306 (354)
T ss_pred             ----CCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCcEEEEECCC------------H
Confidence                00122223333333   33445666677777888999999998777765 4555555555532            2


Q ss_pred             HHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          440 RKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       440 ~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      .++.+.+.++|+.+..........++|++++    +.+|+++++++|++.
T Consensus       307 ~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~----~~e~~~~l~~al~~~  352 (354)
T PRK04635        307 DAVFKALWDAGIVARAYKDPRLANCIRFSFS----NRAETDKLIGLIRNQ  352 (354)
T ss_pred             HHHHHHHHHCCEEEEECCCCCCCCeEEEEeC----CHHHHHHHHHHHHHh
Confidence            3566667777864432222223468999984    689999999999764

>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional

Probab=99.78  E-value=5.3e-17  Score=164.06  Aligned_cols=304  Identities=14%  Similarity=0.134  Sum_probs=186.7

Q ss_pred             HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCC
Q 010842          132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVS  211 (499)
Q Consensus       132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g  211 (499)
                      +++.+++++.+|.+.         .++++|||.|+..++.+..-          .++..|+++..+|.++..++...|+ 
T Consensus        34 ~~~e~~la~~~g~~~---------~v~~~sgt~al~~~l~~~~~----------~~Gd~Viv~~~t~~~~~~~~~~~G~-   93 (375)
T PRK11706         34 RRCQQWLEQRFGSAK---------VLLTPSCTAALEMAALLLDI----------QPGDEVIMPSYTFVSTANAFVLRGA-   93 (375)
T ss_pred             HHHHHHHHHHhCCCe---------EEEECCHHHHHHHHHHHhCC----------CCCCEEEECCCCcHHHHHHHHHcCC-
Confidence            334445888888754         38999999998776654411          1567899999999999999999999 


Q ss_pred             CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhcc
Q 010842          212 PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACI  291 (499)
Q Consensus       212 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~  291 (499)
                        +++.+++++++ +.+|+++|+++++++++      +|+.++   ++|...|+++|.++|+++|+++++|+||+.+...
T Consensus        94 --~~v~~d~d~~~-~~~d~~~le~~i~~~tk------~i~~~~---~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~  161 (375)
T PRK11706         94 --KIVFVDIRPDT-MNIDETLIEAAITPKTR------AIVPVH---YAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTY  161 (375)
T ss_pred             --EEEEEecCCCc-CCcCHHHHHHhcCCCCe------EEEEeC---CCCCccCHHHHHHHHHHcCCEEEEECcccccccc
Confidence              99999998763 88999999999876433      555543   5899999999999999999999999999766422


Q ss_pred             CccchhhhcCCCCCceeEeccc--ccccCCCcceEEEEeCchhHHHh--hcC---CccCCCCCCCCCCCcccCCCcccCC
Q 010842          292 CPEFRHYLNGIERVDSFSFSPH--KWLLSYLDCCCLWVKQPGLLVKA--LST---DPEYLKNKPSESNSVVDFKDWQVGT  364 (499)
Q Consensus       292 ~~~~~~~~~g~~~aDsi~~~~h--K~l~~p~~~g~l~~r~~~~l~~~--~~~---~~~yl~~~~~~~~~~~~~~~~~~~~  364 (499)
                      ..  +. ...+  .|.-+++.|  |.+.+ ...|++++.+++...+.  +..   .........     ...+ .+ ...
T Consensus       162 ~~--~~-~g~~--~~~~~~Sf~~~K~l~~-g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~~~-~~-~~~  228 (375)
T PRK11706        162 KG--RA-LGTI--GHIGCFSFHETKNYTA-GEGGALLINDPALIERAEIIREKGTNRSQFFRGQ-----VDKY-TW-VDI  228 (375)
T ss_pred             CC--ee-eecC--cCEEEEeCCCCccccc-cCCeEEEECCHHHHHHHHHHHHcCCCcchhhccC-----CCcc-ee-eec
Confidence            11  11 1111  355555655  99865 34566667665433221  111   001000000     0000 00 111


Q ss_pred             CCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC---eEEEcCC-----CceEEEEEecCCCCCCcchhH
Q 010842          365 GRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR---FEIVVPR-----HFALVCFRLNPYPHSGSADTE  436 (499)
Q Consensus       365 sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~---~~~~~~~-----~~~~v~f~~~~~~~~~~~~~~  436 (499)
                      +..+....+-+++-....+.+++..++..++++++.+.|.++++   +.+...+     ....+.+.+.+.         
T Consensus       229 g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  299 (375)
T PRK11706        229 GSSYLPSELQAAYLWAQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDL---------  299 (375)
T ss_pred             ccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCc---------
Confidence            22222222222332222366888899999999999999988762   4432111     122333344321         


Q ss_pred             HHHHHHHHHHHhcCCEEEE---eee-------E---CC---------EEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          437 MLNRKLLDWVNSTGRVYLT---HTI-------V---GG---------LYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       437 ~~~~~l~~~l~~~g~~~~~---~~~-------~---~g---------~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      ....++.+.|.++|+....   +..       +   .+         ...+-+- +++..+++|++.++++|+++.
T Consensus       300 ~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP-~~~~l~~~~~~~i~~~i~~~~  374 (375)
T PRK11706        300 EDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLP-LFYNLTDVEQRTVIDTILEFF  374 (375)
T ss_pred             CCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEecc-CCCCCCHHHHHHHHHHHHHHh
Confidence            1245677778888863211   100       0   00         1223333 367889999999999998864

>PRK07671 cystathionine beta-lyase; Provisional

Probab=99.78  E-value=4.5e-17  Score=164.00  Aligned_cols=219  Identities=16%  Similarity=0.177  Sum_probs=155.6

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|....+|+.    ++++.|.+..         +++++|+.|+..++ ....           ++..|+++...|.+..
T Consensus        48 ~~p~~~~Le~~----lA~l~g~~~~---------~~~~sG~aai~~~~-~~l~-----------~Gd~Viv~~~~y~~~~  102 (377)
T PRK07671         48 GNPTRAALEEL----IAVLEGGHAG---------FAFGSGMAAITAVM-MLFS-----------SGDHVILTDDVYGGTY  102 (377)
T ss_pred             CChHHHHHHHH----HHHHhCCCce---------EEeCCHHHHHHHHH-HHhC-----------CCCEEEECCCccchHH
Confidence            45667777777    9999997654         78888887654433 2211           4667888888877433


Q ss_pred             H----HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 K----VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 k----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                      .    .+...|+   +++.++.       .|+++++++|+++++      +|++..++|++|.+.|+++|+++|+++|++
T Consensus       103 ~~~~~~~~~~G~---~v~~v~~-------~d~~~l~~ai~~~tk------lV~le~P~NPtg~~~dl~~I~~la~~~g~~  166 (377)
T PRK07671        103 RVMTKVLNRFGI---EHTFVDT-------SNLEEVEEAIRPNTK------AIYVETPTNPLLKITDIKKISTIAKEKGLL  166 (377)
T ss_pred             HHHHHHHhcCCe---EEEEECC-------CCHHHHHHhcCCCCe------EEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence            3    3445677   7887763       388999999876554      788899999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      +++|++|+......+    ..   .++|.++.+.+||+++|.+  .|+++++++....+.. ....++            
T Consensus       167 lvvD~a~~~~~~~~p----~~---~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~-~~~~~~------------  226 (377)
T PRK07671        167 TIVDNTFMTPYWQSP----IS---LGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLH-FVQNST------------  226 (377)
T ss_pred             EEEECCCCccccCCh----hh---hCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHH-HHHHhh------------
Confidence            999999976433211    11   1489999999999998854  6777777654332221 111111            


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                              +-.......|..++.  .+.+..++++..+++..+.+.|++.|++.-+
T Consensus       227 --------g~~~~~~~a~l~~~~--l~tl~~R~~~~~~na~~la~~L~~~~~v~~v  272 (377)
T PRK07671        227 --------GGILGPQDSWLLLRG--LKTLGIRMEEHETNSRAIAEFLNNHPAVNKV  272 (377)
T ss_pred             --------cCCCCHHHHHHHHcC--cChHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence                    112234566766654  4667789999999999999999999987644

>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]

Probab=99.78  E-value=2.9e-17  Score=157.88  Aligned_cols=367  Identities=11%  Similarity=0.069  Sum_probs=236.6

Q ss_pred             HHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHccc-CCcccccChhhHHHHHHHHHHHHHHcCCCCccc
Q 010842           71 TILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNS-VGFNWLASPASTELEIVVMDWLATMLKLPKTFM  149 (499)
Q Consensus        71 ~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~  149 (499)
                      .+.-++.++...+...  +|  +|.-...-.+|..+.+.+...... ....|..+-+..++.+.+.+.+++++|..... 
T Consensus        18 ~vw~e~~~la~e~~~~--~~--LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~-   92 (420)
T KOG0257|consen   18 YVWTEINRLAAEHKVP--NP--LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDP-   92 (420)
T ss_pred             cHHHHHHHHHHhcCCC--Cc--ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCC-
Confidence            4455554444433322  22  665555666778888877766543 34567778888999999999999988762110 


Q ss_pred             cCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC------CC
Q 010842          150 FSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS------VD  223 (499)
Q Consensus       150 ~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~------~~  223 (499)
                         ....++|.|+.+|++.+++...+           +++.|++-++.+.++.-...+.|.   .++.||..      ..
T Consensus        93 ---~~eVlVT~GA~~ai~~~~~~l~~-----------~GDeVii~eP~fd~Y~~~~~maG~---tpv~v~~~~~~g~~~s  155 (420)
T KOG0257|consen   93 ---DDEVLVTAGANEAISSALLGLLN-----------PGDEVIVFEPFFDCYIPQVVMAGG---TPVFVPLKPKEGNVSS  155 (420)
T ss_pred             ---cccEEEecCchHHHHHHHHHHcC-----------CCCEEEEecCcchhhhhHHhhcCC---cceeeccccccccccC
Confidence               02469999999999999888765           688899999999999999999999   99999887      33


Q ss_pred             CCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCccchh--h
Q 010842          224 ANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH--Y  298 (499)
Q Consensus       224 ~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~--~  298 (499)
                      .+|.+|.+.||.++.+.++      +|+.+.|+||+|.+   ..|++|++||++||+|++.|.+|........++-.  .
T Consensus       156 ~~~~~D~~~le~~~t~kTk------~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~as  229 (420)
T KOG0257|consen  156 SDWTLDPEELESKITEKTK------AIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIAS  229 (420)
T ss_pred             ccccCChHHHHhhccCCcc------EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeec
Confidence            4699999999999999887      89999999999999   55899999999999999999999776543321211  1


Q ss_pred             hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC---cHHHH
Q 010842          299 LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK---SLRLW  374 (499)
Q Consensus       299 ~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~---al~~~  374 (499)
                      +.|+...-.-+.++.|.++.. .-.|+++. ++..+......+...                 ...++.++.   +.++.
T Consensus       230 lPgm~ertitvgS~gKtf~~TGWrlGW~ig-p~~L~~~~~~vh~~~-----------------~~~~~Tp~q~A~a~a~~  291 (420)
T KOG0257|consen  230 LPGMYERTITVGSFGKTFGVTGWRLGWAIG-PKHLYSALFPVHQNF-----------------VFTCPTPIQEASAAAFA  291 (420)
T ss_pred             CCchhheEEEeccccceeeeeeeeeeeeec-hHHhhhhHHHHhhcc-----------------ccccCcHHHHHHHHHHh
Confidence            255544556677889988653 55788877 443332211111111                 111222211   11111


Q ss_pred             HHH--HHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCc-chhH--HHHHHHHHHHHh
Q 010842          375 MVL--RSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGS-ADTE--MLNRKLLDWVNS  448 (499)
Q Consensus       375 ~~l--~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~-~~~~--~~~~~l~~~l~~  448 (499)
                      ..+  ..-+ .....++.+...++++.+.+.|.++ |+.+..+.....+...+........ +.+.  ...-++...+..
T Consensus       292 ~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~  370 (420)
T KOG0257|consen  292 LELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIK  370 (420)
T ss_pred             hhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhc
Confidence            112  1111 1334558888999999999999999 8988765554444444442110100 0010  011234444444


Q ss_pred             c-CCEEEEeeeECCE-------EEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          449 T-GRVYLTHTIVGGL-------YMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       449 ~-g~~~~~~~~~~g~-------~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                      . |.+++.++.+...       ..+|++++   -+++-++..++.++
T Consensus       371 ~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~---k~~~~L~~a~e~l~  414 (420)
T KOG0257|consen  371 EGGVVVIPPSAFGSREHIKVAERLVRFCFC---KADETLRKAIERLK  414 (420)
T ss_pred             cCcEEEeCchhcCCchhhHHHHHHHHHHHH---hhHHHHHHHHHHHh
Confidence            3 5556666555432       35666664   45556666666665

>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase

Probab=99.78  E-value=6e-17  Score=163.61  Aligned_cols=219  Identities=17%  Similarity=0.264  Sum_probs=155.2

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--  200 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--  200 (499)
                      ..|...++|+.    +++++|.+..         ++++||++|+..++.+...           ++..|+++...|.+  
T Consensus        52 ~~p~~~~le~~----la~l~g~~~~---------~~~~sG~~Ai~~al~al~~-----------~Gd~Vl~~~~~~~~t~  107 (380)
T TIGR01325        52 ANPTVAAFEER----IAALEGAERA---------VATATGMSAIQAALMTLLQ-----------AGDHVVASRSLFGSTV  107 (380)
T ss_pred             CCchHHHHHHH----HHHHhCCCcE---------EEECCHHHHHHHHHHHHhC-----------CCCEEEEecCCcchHH
Confidence            34666777776    8889988543         8899999999888866532           45567777777754  


Q ss_pred             --HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          201 --FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       201 --~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                        +.+.+...|+   +++.++.+       |++++++++++++      .+|++..++|++|.+.|+++|+++|+++|++
T Consensus       108 ~~~~~~~~~~g~---~v~~v~~~-------d~~~l~~~i~~~t------klV~le~p~np~g~~~dl~~I~~la~~~gi~  171 (380)
T TIGR01325       108 GFISEILPRFGI---EVSFVDPT-------DLNAWEAAVKPNT------KLVFVETPSNPLGELVDIAALAELAHAIGAL  171 (380)
T ss_pred             HHHHHHHHHhCC---EEEEECCC-------CHHHHHHhcCCCc------eEEEEECCCCCCCeeeCHHHHHHHHHHcCCE
Confidence              3445677888   88888753       7888988876543      3788899999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      ++||++|+.+....|    .-.   ++|.++.+.+|+++++..  .|+++.++ +... .+..   +..           
T Consensus       172 livD~a~~~~~~~~p----l~~---g~Divv~S~sK~l~g~g~~~gG~vv~~~-~~~~-~l~~---~~~-----------  228 (380)
T TIGR01325       172 LVVDNVFATPVLQQP----LKL---GADVVVYSATKHIDGQGRVMGGVIAGSE-ELMA-EVAV---YLR-----------  228 (380)
T ss_pred             EEEECCCcccccCCc----hhh---CCCEEEeeccceecCCCCeEEEEEEeCH-HHHH-HHHH---HHH-----------
Confidence            999999976533211    111   489999999999987743  35555443 3222 1110   100           


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                            ..+.......+|..++  |.+.+..++++..+++.++.+.|+++|+++-+
T Consensus       229 ------~~g~~~~p~~a~~~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V  276 (380)
T TIGR01325       229 ------HTGPAMSPFNAWVLLK--GLETLSLRMQKQFDSALAIAEWLQAQPQVQAV  276 (380)
T ss_pred             ------hhCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCccEE
Confidence                  0111223445566655  45778889999999999999999999987643

This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.

>PRK05939 hypothetical protein; Provisional

Probab=99.78  E-value=1.4e-17  Score=168.48  Aligned_cols=240  Identities=14%  Similarity=0.098  Sum_probs=157.7

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-  200 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-  200 (499)
                      ...|....+|++    ++++.|.+..         +++++|+.|+..++.+...           ++..|+++...|.+ 
T Consensus        44 ~g~p~~~~lE~~----la~leg~~~~---------v~~ssG~~Ai~~~l~all~-----------~Gd~Vv~~~~~y~~t   99 (397)
T PRK05939         44 QGTPTTAALEAK----ITKMEGGVGT---------VCFATGMAAIAAVFLTLLR-----------AGDHLVSSQFLFGNT   99 (397)
T ss_pred             CCCHHHHHHHHH----HHHHhCCCeE---------EEeCCHHHHHHHHHHHHcC-----------CCCEEEECCCccccH
Confidence            356888889998    8889887664         7788888888777765422           56678888776643 


Q ss_pred             --HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          201 --FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       201 --~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                        +.+.+...|+   +++.++.       .|+++|+++++++++      +|++..++|++|.+.|+++|+++|+++|++
T Consensus       100 ~~~~~~l~~~G~---~v~~v~~-------~d~e~l~~~l~~~tk------lV~vesp~NptG~v~dl~~I~~la~~~gi~  163 (397)
T PRK05939        100 NSLFGTLRGLGV---EVTMVDA-------TDVQNVAAAIRPNTR------MVFVETIANPGTQVADLAGIGALCRERGLL  163 (397)
T ss_pred             HHHHHHHHhcCC---EEEEECC-------CCHHHHHHhCCCCCe------EEEEECCCCCCCCHHhHHHHHHHHHHcCCE
Confidence              4456667788   8888875       278999999876543      788899999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc-ceEEEEeCch-hHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-CCCLWVKQPG-LLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~r~~~-~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      ++||++|+.+...-+    ...   ++|.+..+.||+++++.+ .|.+++.+.. ...........|........ ....
T Consensus       164 livD~t~a~~~~~~~----~~~---gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  235 (397)
T PRK05939        164 YVVDNTMTSPWLFRP----KDV---GASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQW-GLTQ  235 (397)
T ss_pred             EEEECCcccccccCc----ccc---CCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhH-HHHH
Confidence            999999976532211    111   499999999999997644 2333332221 00000000001100000000 0000


Q ss_pred             CCC-cccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010842          357 FKD-WQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI  411 (499)
Q Consensus       357 ~~~-~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~  411 (499)
                      ... .....+-...+...|+.++  |.+.+..++++..+++..+++.|+++|.++-
T Consensus       236 ~~~~~~~~~G~~~~p~~a~l~~r--gl~tl~~R~~~~~~na~~la~~L~~~p~V~~  289 (397)
T PRK05939        236 IRKKGLRDMGATLSSEAAHRIAI--GAETLALRVDRSCSNALALAQFLEAHPKVAR  289 (397)
T ss_pred             HHHHHHHhcCCCCCHHHHHHHHc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccE
Confidence            000 0001222234455665554  5688999999999999999999999998753

>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase

Probab=99.78  E-value=9.9e-17  Score=161.71  Aligned_cols=223  Identities=19%  Similarity=0.203  Sum_probs=157.8

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|....+|+.    ++++.|.+         .+++++||++|+..++.+...           ++..|+++...|.+..
T Consensus        49 ~~p~~~~le~~----lA~l~g~~---------~v~~~~gg~~Ai~~~l~all~-----------~GD~Vl~~~p~y~~~~  104 (382)
T TIGR02080        49 GNPTRDLLQQA----LAELEGGA---------GAVVTNTGMSAIHLVTTALLG-----------PDDLLVAPHDCYGGTY  104 (382)
T ss_pred             CCchHHHHHHH----HHHHhCCC---------cEEEEcCHHHHHHHHHHHHcC-----------CCCEEEEcCCCcHHHH
Confidence            44666677776    88888843         258999999998877766532           5667888888887655


Q ss_pred             HHHH-HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842          203 KVCK-LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV  281 (499)
Q Consensus       203 ka~~-~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv  281 (499)
                      ..+. +.+.+.-.+..++       ..|+++++++++++++      +|+++.++|++|.+-|+++|+++|+++|+++++
T Consensus       105 ~~~~~~~~~~~~~v~~~d-------~~d~~~l~~ai~~~tk------lV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvv  171 (382)
T TIGR02080       105 RLLNALAKKGCFRVLFVD-------QGDEQALRAALAQKPK------LVLIETPSNPLLRVVDIAKICHLAKAVGAVVVV  171 (382)
T ss_pred             HHHHHHHhhcCeEEEEEC-------CCCHHHHHHhcCcCce------EEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence            4332 2333111444443       2388999999876543      788899999999999999999999999999999


Q ss_pred             eccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842          282 DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD  359 (499)
Q Consensus       282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  359 (499)
                      |++|+.+....|    +..   ++|.++.+.+||++++.+  .|++.++++....+ +.....++               
T Consensus       172 D~a~~~~~~~~p----l~~---gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~-l~~~~~~~---------------  228 (382)
T TIGR02080       172 DNTFLSPALQNP----LAL---GADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEE-LAWWANNL---------------  228 (382)
T ss_pred             ECCCcccccCCc----hhh---CCCEEEeecceeccCCCCceeEEEEeCCHHHHHH-HHHHHHcc---------------
Confidence            999976533211    111   379999999999987766  77777776653322 11111111               


Q ss_pred             cccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          360 WQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       360 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                           |.....+..|+.++  |.+.+..++++..+++..+.++|+++|.++-+
T Consensus       229 -----g~~~sp~~a~l~lr--~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V  274 (382)
T TIGR02080       229 -----GVTGGAFDSYLTLR--GLRTLVARMRLQQRNAQAIVEYLQTQPLVKKI  274 (382)
T ss_pred             -----CCCCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence                 11234567777766  44788888999999999999999999988744

This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.

>PLN03026 histidinol-phosphate aminotransferase; Provisional

Probab=99.77  E-value=7.2e-16  Score=156.12  Aligned_cols=286  Identities=14%  Similarity=0.063  Sum_probs=191.1

Q ss_pred             HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC
Q 010842          134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA  213 (499)
Q Consensus       134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~  213 (499)
                      +++.+++++|.+.+       ..++|+|+++++..++.+..+           ++..|+++.+++..+...++..|+   
T Consensus        91 lr~~ia~~~~~~~~-------~I~~t~Ga~~~i~~~~~~~~~-----------~gd~Vlv~~P~y~~y~~~~~~~g~---  149 (380)
T PLN03026         91 LRAALAEDSGLESE-------NILVGCGADELIDLLMRCVLD-----------PGDKIIDCPPTFGMYVFDAAVNGA---  149 (380)
T ss_pred             HHHHHHHHhCcChh-------hEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC---
Confidence            44558888888654       458899999988776655422           466788888898888888899999   


Q ss_pred             CeEEeeCCCCCCCccCHHHHHHHHH-HHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccC
Q 010842          214 NIRALPTSVDANFSLSPQLLRRAVE-ADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACIC  292 (499)
Q Consensus       214 ~v~~v~~~~~~~~~~d~~~L~~~i~-~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~  292 (499)
                      +++.+|.+.  +|.+|+++|++++. +.+      .+|+++.++|+||.+-|.+++.++++.. +|+++|++|..+... 
T Consensus       150 ~~~~v~~~~--~~~~d~~~l~~~~~~~~~------~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~-  219 (380)
T PLN03026        150 EVIKVPRTP--DFSLDVPRIVEAVETHKP------KLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQ-  219 (380)
T ss_pred             EEEEeecCC--CCCcCHHHHHHHHhccCC------cEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCC-
Confidence            999999864  47899999999883 333      3788889999999999999999999865 999999999765321 


Q ss_pred             ccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcH
Q 010842          293 PEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSL  371 (499)
Q Consensus       293 ~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al  371 (499)
                      .......... .-..+..+..|.++.| ...|+++... ..+.........|                       ....+
T Consensus       220 ~~~~~~~~~~-~~viv~~SfSK~~glaGlRiGy~~~~~-~~i~~l~~~~~~~-----------------------~~~~~  274 (380)
T PLN03026        220 ESRMKWVKKY-DNLIVLRTFSKRAGLAGLRVGYGAFPL-SIIEYLWRAKQPY-----------------------NVSVA  274 (380)
T ss_pred             cchHHHHHhC-CCEEEEecchHhhcCccccceeeecCH-HHHHHHHHhcCCC-----------------------CCCHH
Confidence            1111111111 1235677889998744 5578777543 3222211111111                       01223


Q ss_pred             HHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcC
Q 010842          372 RLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTG  450 (499)
Q Consensus       372 ~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g  450 (499)
                      ...++...+. .+.+++..++..+.++++.+.|++++++++ .++..+.+.+++.+..         ...++.+.|.++|
T Consensus       275 ~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~~---------~~~~~~~~l~~~g  344 (380)
T PLN03026        275 AEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRVTSGR---------DAKKLKEDLAKMG  344 (380)
T ss_pred             HHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEECCCCC---------CHHHHHHHHHHCC
Confidence            3344444442 244666777778888899999998865554 4556666777664310         1356777777788


Q ss_pred             CEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          451 RVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       451 ~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      +.+.......+..++|++++    +.+++++++++|+++
T Consensus       345 I~v~~~~~~~~~~~lRis~~----~~~~~~~l~~al~~~  379 (380)
T PLN03026        345 VMVRHYNSKELKGYIRVSVG----KPEHTDALMEALKQL  379 (380)
T ss_pred             eEEEECCCCCCCCEEEEecC----CHHHHHHHHHHHHHh
Confidence            65433322234568999996    678899999998764

>PLN02672 methionine S-methyltransferase

Probab=99.77  E-value=2.9e-16  Score=171.89  Aligned_cols=338  Identities=12%  Similarity=0.134  Sum_probs=205.8

Q ss_pred             hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      +|..+.+.+...+.....    ++....+.+++.+|+++.+|++.+.    ....++++|+++++..++.+..+      
T Consensus       711 pPp~V~eAi~eal~~~~~----s~g~pdlr~aLa~~la~~~Gv~~d~----~e~IIvt~Gs~elL~lll~aLl~------  776 (1082)
T PLN02672        711 VPSAVKASIFESFVRQNI----SESETDPRPSILQFIKSNYGFPTDS----CTEFVYGDTSLALFNKLVLCCVQ------  776 (1082)
T ss_pred             CCHHHHHHHHHHHhhcCC----CCCChHHHHHHHHHHHHHhCcCCCC----CCEEEEeCCHHHHHHHHHHHHcC------
Confidence            344455555554432211    2223456789999999999996531    01346666665655555554432      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCC-Cccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGT-TSTT  260 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gt-t~~G  260 (499)
                           ++..|+++.++++.+..+++..|.   +++.||++++++|.+|+++|++++++.+    .+ .|+.+.++ ||||
T Consensus       777 -----pGD~VLVp~PtY~~Y~~~a~~~Ga---~vv~Vpl~~e~gf~lD~d~Le~al~~~~----~~-~I~L~nPnhNPTG  843 (1082)
T PLN02672        777 -----EGGTLCFPAGSNGTYVSAAKFLKA---NFRRIPTKSSDGFKLTAKTLASTLETVK----KP-WVYISGPTINPTG  843 (1082)
T ss_pred             -----CCCEEEEeCCChHHHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHhccCC----CC-EEEEECcCCCCcC
Confidence                 567888999999999999999999   9999999865569999999999985421    12 57788887 9999


Q ss_pred             cc---CChhHHHHHHHHhCCEEEeeccccchhccCcc-----chhhhcCCCC---C-ce-eEecccccccCC-CcceEEE
Q 010842          261 AV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPE-----FRHYLNGIER---V-DS-FSFSPHKWLLSY-LDCCCLW  326 (499)
Q Consensus       261 ~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~-----~~~~~~g~~~---a-Ds-i~~~~hK~l~~p-~~~g~l~  326 (499)
                      .+   +.+++|+++|++||+++++|.+|+...+..+.     ..........   . .+ +..+..|.++.| .-+|+++
T Consensus       844 ~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylI  923 (1082)
T PLN02672        844 LLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLA  923 (1082)
T ss_pred             ccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEE
Confidence            99   56788888999999999999999865442211     1111111111   1 12 344677655544 6689988


Q ss_pred             EeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc------HHHHHHHHHHHHHHHHHHH
Q 010842          327 VKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG------VLNLQSHIRSDIRLAKMFE  400 (499)
Q Consensus       327 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g------~~g~~~~~~~~~~~a~~l~  400 (499)
                      ..++... +.+.....+....                   ....+.+...+..+.      .+.+++..+...+.++++.
T Consensus       924 ap~~eLi-~~l~~~~~~s~~~-------------------~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~  983 (1082)
T PLN02672        924 LNDSVLI-DAFHSAPGLSRPH-------------------STLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLK  983 (1082)
T ss_pred             eCCHHHH-HHHHHhhhhcCCC-------------------cHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHH
Confidence            7665332 2222111110000                   001122222222221      1345566666778888999


Q ss_pred             HHHhcCCCeEEEcCCCceEEEEEecCCCC-----CC-c---chhHHHHHHHHHHHHhcCCEEEEeeeE-CCEEEEEEecc
Q 010842          401 GFVKSDPRFEIVVPRHFALVCFRLNPYPH-----SG-S---ADTEMLNRKLLDWVNSTGRVYLTHTIV-GGLYMLRFAVG  470 (499)
Q Consensus       401 ~~L~~~~~~~~~~~~~~~~v~f~~~~~~~-----~~-~---~~~~~~~~~l~~~l~~~g~~~~~~~~~-~g~~~lRi~~~  470 (499)
                      +.|++. ++++. +|..+.+.|...+.-.     .+ .   ........++.+.|.++..+.+.++.+ +..+++|++++
T Consensus       984 e~L~~~-Gi~v~-~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa 1061 (1082)
T PLN02672        984 ETLEAC-GWDVL-EPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFA 1061 (1082)
T ss_pred             HHHHHC-CCeEe-cCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEec
Confidence            999887 78765 5655555543211000     00 0   000011356778887663344444444 34578999996


Q ss_pred             CCCCcHHHHHHHHHHHHHHHH
Q 010842          471 ASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       471 ~~~~t~~di~~l~~~l~~~~~  491 (499)
                         ++++++++.++.|+++.+
T Consensus      1062 ---~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672       1062 ---LEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred             ---CCHHHHHHHHHHHHHHHH
Confidence               578899999999988654

>PLN02271 serine hydroxymethyltransferase

Probab=99.77  E-value=6.8e-17  Score=163.92  Aligned_cols=328  Identities=11%  Similarity=0.064  Sum_probs=204.4

Q ss_pred             cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC---C
Q 010842          121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ---T  197 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~---~  197 (499)
                      |.......++|..+.+...++||.+...+    +--+-.-+||.||+.++.+...           +++.|+..+.   .
T Consensus       186 y~G~~~iD~iE~la~era~~lF~~~~~~~----gaNVQp~SGs~AN~aV~~ALl~-----------PGD~IL~ldl~~GG  250 (586)
T PLN02271        186 YTGNQYIDQIERLCCERALAAFGLDSEKW----GVNVQPYSCTSANFAVYTGLLL-----------PGDRIMGLDSPSGG  250 (586)
T ss_pred             CCCChhHHHHHHHHHHHHHHHhCCccccc----ccceeeccHHHHHHHHHHHhcC-----------CCCEEEEecCCCCC
Confidence            34445677999999999999999876321    0115555899999988876632           6777776444   4


Q ss_pred             chhHH------HHHHHhCCCCCCeEEee--CCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHH
Q 010842          198 HSTFA------KVCKLAGVSPANIRALP--TSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLA  269 (499)
Q Consensus       198 H~s~~------ka~~~~G~g~~~v~~v~--~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~  269 (499)
                      |.+..      +-+...|+   .+..+|  ++++ ++.+|.++|++....     .+|.+|++.+..++  ..-|+++|+
T Consensus       251 Hlshg~~~~~g~~vs~sG~---~~~~vpY~~d~~-~g~IDyd~lek~a~~-----~rPKLII~g~Sayp--r~~D~~~i~  319 (586)
T PLN02271        251 HMSHGYYTPGGKKVSGASI---FFESLPYKVNPQ-TGYIDYDKLEEKALD-----FRPKILICGGSSYP--REWDYARFR  319 (586)
T ss_pred             chhcccccccccccccccc---eEEEEEcccccc-cCccCHHHHHHHhhh-----cCCeEEEECchhcc--CcCCHHHHH
Confidence            55543      23345566   566666  5433 368999999985433     23667777655554  668999999


Q ss_pred             HHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCC
Q 010842          270 EVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPS  349 (499)
Q Consensus       270 ~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~  349 (499)
                      ++|+++|++++||+||..+.+....+...   +..+|++++++||||.+|.| |++++++...  ...  .+........
T Consensus       320 eIAdevGA~LmvD~AH~aGLIa~g~~~sP---~~~aDvvt~TTHKtLrGPrG-G~I~~r~~~~--~~~--~g~~gs~s~~  391 (586)
T PLN02271        320 QIADKCGAVLMCDMAHISGLVAAKECVNP---FDYCDIVTSTTHKSLRGPRG-GIIFYRKGPK--LRK--QGMLLSHGDD  391 (586)
T ss_pred             HHHHHcCCEEEEECcccccccccCcCCCC---CcCCcEEEeCCcccCCCCCc-eEEEeccccc--ccc--cCCccccccc
Confidence            99999999999999998887654433222   33599999999999999998 8888875421  000  0000000000


Q ss_pred             ----CCCCcccCC-CcccCCCCCCCc-HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CCCceEEEE
Q 010842          350 ----ESNSVVDFK-DWQVGTGRRFKS-LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PRHFALVCF  422 (499)
Q Consensus       350 ----~~~~~~~~~-~~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~~~v~f  422 (499)
                          +.....+.. -.+++.|..... ..+..+++......++++.++..++|+.|.+.|.+. |++++. ..+.+.+.+
T Consensus       392 ~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggTdnHlvLv  470 (586)
T PLN02271        392 NSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGTDNHLLLW  470 (586)
T ss_pred             cccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCCCcceeee
Confidence                000000000 013445544332 345556666555677999999999999999999887 999885 355666766


Q ss_pred             EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee-EC----CEEEEEEecc---CCCCcHHHHHHHHHHHHHHHH
Q 010842          423 RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI-VG----GLYMLRFAVG---ASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~----g~~~lRi~~~---~~~~t~~di~~l~~~l~~~~~  491 (499)
                      .+.+.+      +  ......+.|.+.|+.+-..+. ..    ....+|+...   .....++|++++.+.|.++++
T Consensus       471 Dl~~~g------~--~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~  539 (586)
T PLN02271        471 DLTTLG------L--TGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ  539 (586)
T ss_pred             cCcccC------C--CHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence            665432      0  023333344444543211111 11    1245898762   233356888888887777665

>PRK02610 histidinol-phosphate aminotransferase; Provisional

Probab=99.77  E-value=9.1e-16  Score=155.20  Aligned_cols=318  Identities=13%  Similarity=0.079  Sum_probs=198.2

Q ss_pred             HHHHHHHHHcccC--CcccccChhhHHHHHHHHHHHHHHcC----CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHH
Q 010842          105 FLGEMLCACFNSV--GFNWLASPASTELEIVVMDWLATMLK----LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRAL  178 (499)
Q Consensus       105 ~~~~~l~~~~n~~--~~~~~~~p~~~~lE~~~~~~la~l~g----~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~  178 (499)
                      .+.+.+...++.+  ...|. .++..++.+++.+|+.+..|    .+.+       ..++|+|+++++..++.+...   
T Consensus        45 ~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~~-------~I~it~Ga~~al~~~~~~~~~---  113 (374)
T PRK02610         45 DLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQITPA-------NISVGNGSDELIRSLLIATCL---  113 (374)
T ss_pred             HHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCCCHH-------HEEEcCChHHHHHHHHHHHcC---
Confidence            4445555444432  12343 35678888888888877653    3333       468899999987666554322   


Q ss_pred             hHhhhhccCC-eEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC
Q 010842          179 DAVGAENMHK-LVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT  257 (499)
Q Consensus       179 ~~~~~~g~~~-~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt  257 (499)
                              ++ ..|++..+++..+..+++..|+   +++.+|.+++ +|.+|+++|++++++..  ...+.+|+++.++|
T Consensus       114 --------~g~~~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~~--~~~~k~i~l~~P~N  179 (374)
T PRK02610        114 --------GGEGSILVAEPTFSMYGILAQTLGI---PVVRVGRDPE-TFEIDLAAAQSAIEQTQ--NPPVRVVFVVHPNS  179 (374)
T ss_pred             --------CCCCeEEEcCCChHHHHHHHHHcCC---EEEEecCCcc-cCCCCHHHHHHHHHhhc--CCCceEEEEeCCCC
Confidence                    23 3688899999999999999999   9999998754 48999999999986411  12244787888999


Q ss_pred             cccccCChhHHHHHHH-HhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842          258 STTAVDNVEPLAEVAN-EYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK  335 (499)
Q Consensus       258 ~~G~id~l~~I~~ia~-~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~  335 (499)
                      |||.+-+.+++.++++ .+++|+++|.+|..+... +.. ..+..... -.+..+..|.++.| .-+|+++.. +... +
T Consensus       180 PTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~-~~~-~~~~~~~~-~ivi~SfSK~~g~~GlRiG~~v~~-~~l~-~  254 (374)
T PRK02610        180 PTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQT-TLV-GELAQHPN-WVILRTFSKAFRLAAHRVGYAIGH-PELI-A  254 (374)
T ss_pred             CCCCCCCHHHHHHHHhccCCcEEEEeccccccCcc-chH-HHHhcCCC-EEEEEecchhccCcccceeeeecC-HHHH-H
Confidence            9999977666655543 148999999999765321 111 11111111 24567889999655 668888753 3332 3


Q ss_pred             hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842          336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP  414 (499)
Q Consensus       336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~  414 (499)
                      .+.... +...                     ...+...++...++. +.+.+.+++..+.++.+.+.|++++++.+. +
T Consensus       255 ~l~~~~-~~~~---------------------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p  311 (374)
T PRK02610        255 VLEKVR-LPYN---------------------LPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQLRVW-P  311 (374)
T ss_pred             HHHHhc-CCCC---------------------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEeC-C
Confidence            322211 0000                     012333333344432 344444555555667788888888887754 4


Q ss_pred             CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +..+.+.+++....         ....+.+.+.++|..+ .+    ...++|++++    +.+++++++++|+++.+.+
T Consensus       312 ~~g~f~~~~l~~~~---------~~~~~~~~l~~~gi~v-~~----~~~~lRls~~----~~~~~~~~l~~l~~~l~~~  372 (374)
T PRK02610        312 SAANFLYLRLSQDA---------ALAALHQALKAQGTLV-RH----TGGGLRITIG----TPEENQRTLERLQAALTQL  372 (374)
T ss_pred             CcceEEEEeCCCCC---------CHHHHHHHHHHCCEEE-Ee----CCCeEEEeCC----CHHHHHHHHHHHHHHHhhc
Confidence            55555555554310         1355677777788644 22    2357999986    3567899999998887654

>PRK09105 putative aminotransferase; Provisional

Probab=99.77  E-value=6e-16  Score=156.06  Aligned_cols=280  Identities=13%  Similarity=0.073  Sum_probs=187.0

Q ss_pred             HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC
Q 010842          134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA  213 (499)
Q Consensus       134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~  213 (499)
                      +++.+++.+|.+++       ..++|+|+++++..++.+..+           ++..|++++++|..+...++..|+   
T Consensus        83 Lr~aia~~~~v~~e-------~I~it~Gs~~ai~~~~~~l~~-----------~gd~Vli~~P~y~~~~~~~~~~g~---  141 (370)
T PRK09105         83 LRTLFAAQEGLPAD-------HVMAYAGSSEPLNYAVLAFTS-----------PTAGLVTADPTYEAGWRAADAQGA---  141 (370)
T ss_pred             HHHHHHHHhCcChh-------hEEEcCChHHHHHHHHHHHcC-----------CCCEEEEeCCChHHHHHHHHHcCC---
Confidence            33447778888665       468999999998877766532           466788899999999999999999   


Q ss_pred             CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH--hCCEEEeeccccchhcc
Q 010842          214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE--YGIWVHVDAAYAGSACI  291 (499)
Q Consensus       214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~--~~~~lhvD~A~g~~~~~  291 (499)
                      +++.+|.++  +|.+|+++|++.. +.      +.+|+.+.++||||.+-+.++|.++++.  +++|+++|++|..+.. 
T Consensus       142 ~~~~v~~~~--~~~~d~~~l~~~~-~~------~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~-  211 (370)
T PRK09105        142 PVAKVPLRA--DGAHDVKAMLAAD-PN------AGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSD-  211 (370)
T ss_pred             eEEEecCCC--CCCCCHHHHHhcC-CC------CCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhcc-
Confidence            999999875  3689999998752 22      2367888999999999998888888764  4899999999965421 


Q ss_pred             CccchhhhcCCCCCceeEe-cccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC
Q 010842          292 CPEFRHYLNGIERVDSFSF-SPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK  369 (499)
Q Consensus       292 ~~~~~~~~~g~~~aDsi~~-~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~  369 (499)
                      .+.......  ...+.+++ +..|.++.| ..+|+++... ..+ +.+... .+    .                  ...
T Consensus       212 ~~s~~~~~~--~~~~vi~~~SfSK~~g~~GlRiG~~v~~~-~~i-~~l~~~-~~----~------------------~~~  264 (370)
T PRK09105        212 APSVVDLVA--QRKDLIVLRTFSKLYGMAGMRLGLAAARP-DLL-AKLARF-GH----N------------------PLP  264 (370)
T ss_pred             CcchHHHHh--hCCCEEEEecccHhhcCCccceeeeecCH-HHH-HHHHhc-CC----C------------------CcC
Confidence            111111111  12455554 677888644 4588887643 322 222111 00    0                  012


Q ss_pred             cHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh
Q 010842          370 SLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS  448 (499)
Q Consensus       370 al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~  448 (499)
                      .....++...+. .+.+++..++..++++++.+.|++. ++++. ++..+.+.+++.. .          ..++.+.|.+
T Consensus       265 ~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~~~f~~~~~~~-~----------~~~l~~~L~~  331 (370)
T PRK09105        265 VPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK-GYKCT-PSQANCFMVDVKR-P----------AKAVADAMAK  331 (370)
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcC-CCCCcEEEEeCCC-C----------HHHHHHHHHH
Confidence            233444444443 3456666778888889999999886 77755 4565655554431 1          3567778888


Q ss_pred             cCCEEEEeeeEC-CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          449 TGRVYLTHTIVG-GLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       449 ~g~~~~~~~~~~-g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      +|+.+ . ..+. ...++|++++    +++++++++++|+++.
T Consensus       332 ~gI~v-~-~~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~  368 (370)
T PRK09105        332 QGVFI-G-RSWPIWPNWVRVTVG----SEEEMAAFRSAFAKVM  368 (370)
T ss_pred             CCcEE-e-cCCCCCCCeEEEEcC----CHHHHHHHHHHHHHHh
Confidence            87654 2 2222 2468999985    5788999999998764

>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated

Probab=99.76  E-value=1e-16  Score=162.43  Aligned_cols=242  Identities=12%  Similarity=0.085  Sum_probs=164.7

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      .+|....||+.    ++++.|....         +.++||+.|+.+++.+...           ++..|+++...+.+..
T Consensus        59 ~nPtv~~lE~~----la~leg~~~a---------v~~~SG~aAi~~al~all~-----------~GD~VI~~~~~Y~~T~  114 (432)
T PRK06702         59 GNPTLAAFEQK----LAELEGGVGA---------VATASGQAAIMLAVLNICS-----------SGDHLLCSSTVYGGTF  114 (432)
T ss_pred             CCcHHHHHHHH----HHHHhCCCcE---------EEECCHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHH
Confidence            46888889988    8888887653         8899999999988876532           5778999998887555


Q ss_pred             HH----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 KV----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                      ..    +..+|+   ++.++..      .+|+++++++|+++++      +|++..++|+++.+-|+++|+++|+++|++
T Consensus       115 ~~~~~~l~~~Gi---~v~~vd~------~~d~~~l~~~I~~~Tk------~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~  179 (432)
T PRK06702        115 NLFGVSLRKLGI---DVTFFNP------NLTADEIVALANDKTK------LVYAESLGNPAMNVLNFKEFSDAAKELEVP  179 (432)
T ss_pred             HHHHHHHHHCCC---EEEEECC------CCCHHHHHHhCCcCCe------EEEEEcCCCccccccCHHHHHHHHHHcCCE
Confidence            54    667788   8888843      4799999999988765      677888999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHH-----HhhcCCccCCCCCCCCC
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLV-----KALSTDPEYLKNKPSES  351 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~-----~~~~~~~~yl~~~~~~~  351 (499)
                      +++|++|+...+.-|    +-.   +||.++.+..||++...+  .|++.........     ......+.+........
T Consensus       180 livD~T~~tP~~~~p----l~~---GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~  252 (432)
T PRK06702        180 FIVDNTLATPYLCQA----FEH---GANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQN  252 (432)
T ss_pred             EEEECCCCchhhCCh----hhc---CCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhc
Confidence            999999975432211    112   499999999999987644  3333322210000     00000000000000000


Q ss_pred             CCccc-----CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          352 NSVVD-----FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       352 ~~~~~-----~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                      .+...     ...+....+-...+...|+.++.+  +.+..++++..+++..+.+.|+++|.++.+
T Consensus       253 ~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL--~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V  316 (432)
T PRK06702        253 FGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGL--ETLHLRMERHSENALAVAKWLADHERIEWV  316 (432)
T ss_pred             cchhhHHHHHHHHHHHHccCCCCHHHHHHHHhcc--CcHHHHHHHHHHHHHHHHHHHHhCCCcceE
Confidence            00000     000111223344567777777655  778999999999999999999999987644

>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase

Probab=99.76  E-value=2.6e-16  Score=156.34  Aligned_cols=273  Identities=16%  Similarity=0.047  Sum_probs=176.7

Q ss_pred             HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCC
Q 010842          132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVS  211 (499)
Q Consensus       132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g  211 (499)
                      .++++++++++|.+.+       ..++|+|+++++... ..+..           ++ .|+++.++|..+...+...|+ 
T Consensus        50 ~~lr~~la~~~~~~~~-------~i~~t~G~~~~i~~~-~~~l~-----------~g-~vl~~~p~y~~~~~~~~~~g~-  108 (330)
T TIGR01140        50 DELRAAAAAYYGLPAA-------SVLPVNGAQEAIYLL-PRLLA-----------PG-RVLVLAPTYSEYARAWRAAGH-  108 (330)
T ss_pred             HHHHHHHHHHhCCChh-------hEEECCCHHHHHHHH-HHHhC-----------CC-eEEEeCCCcHHHHHHHHHcCC-
Confidence            3445558888887643       357888888776553 32221           34 477788899999999999999 


Q ss_pred             CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEEeeccccch
Q 010842          212 PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGS  288 (499)
Q Consensus       212 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~  288 (499)
                        +++.++         |++.|++.+. .+      .+|+++.++|+||.+-+   +++|+++|+++|+++++|.+|+.+
T Consensus       109 --~~~~~~---------d~~~l~~~~~-~~------~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~  170 (330)
T TIGR01140       109 --EVVELP---------DLDRLPAALE-EL------DVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDF  170 (330)
T ss_pred             --EEEEeC---------CHHHHHhhcc-cC------CEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECccccc
Confidence              888876         6788888773 22      26788999999999987   677788899999999999999766


Q ss_pred             hccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842          289 ACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR  367 (499)
Q Consensus       289 ~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~  367 (499)
                      .. .+....... ....+.++.+.+|+++.| ..+|+++.+++ .+.........+                       .
T Consensus       171 ~~-~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~-~~~~l~~~~~~~-----------------------~  224 (330)
T TIGR01140       171 TP-DASLAPQAA-RFPGLVVLRSLTKFFGLAGLRLGFVVAHPA-LLARLREALGPW-----------------------T  224 (330)
T ss_pred             CC-ccchhhHhc-cCCCEEEEEecchhhcCchhhhhheeCCHH-HHHHHHhcCCCC-----------------------C
Confidence            42 111111111 113457888999999855 55788887653 232221111100                       0


Q ss_pred             CCcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHH
Q 010842          368 FKSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWV  446 (499)
Q Consensus       368 ~~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l  446 (499)
                      ...+...++.+.+... ..+...++..++.+++.+.|++++.+++. ++....+++.+.+            ..++.++|
T Consensus       225 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~~~~~~~------------~~~l~~~l  291 (330)
T TIGR01140       225 VNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLEVV-GGTALFLLVRTPD------------AAALHEAL  291 (330)
T ss_pred             chHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeEEEEEcCC------------HHHHHHHH
Confidence            1223344444444333 34566778888899999999998766654 3343444444322            34678888


Q ss_pred             HhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842          447 NSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELI  486 (499)
Q Consensus       447 ~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l  486 (499)
                      .++|+.+..+..+.  +..++|++++   +..++ ++++++|
T Consensus       292 ~~~gi~v~pg~~f~~~~~~~iRi~~~---~~~~~-~~~~~~l  329 (330)
T TIGR01140       292 ARRGILIRDFDNFPGLDPRYLRFALP---TDEEN-DRLEEAL  329 (330)
T ss_pred             HHCCEEEEECCCCCCCCCCEEEEEec---CHHHH-HHHHHhh
Confidence            88886655544443  3468999996   33355 8887766

This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.

>PRK06434 cystathionine gamma-lyase; Validated

Probab=99.76  E-value=1e-16  Score=160.65  Aligned_cols=232  Identities=14%  Similarity=0.173  Sum_probs=162.7

Q ss_pred             cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC---
Q 010842          121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT---  197 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~---  197 (499)
                      ....|...+||+.    ++++.|.+..         +.+++|+.|+..++.+...           ++..|+++...   
T Consensus        60 r~~~P~~~~lE~~----la~leg~~~a---------v~~sSG~aAi~~al~all~-----------~GD~Vl~~~~~yg~  115 (384)
T PRK06434         60 RWGNPTVQAFEEK----YAVLENAEHA---------LSFSSGMGAITSAILSLIK-----------KGKRILSISDLYGQ  115 (384)
T ss_pred             CCCChhHHHHHHH----HHHHhCCCcE---------EEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCccch
Confidence            3467888999998    8888887654         8999999998888876421           56677777553   


Q ss_pred             -chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC
Q 010842          198 -HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG  276 (499)
Q Consensus       198 -H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~  276 (499)
                       +..+.+.+...|+   +++++++++.+.+.+++        ++      +.+|+...++|+++.+.|+++|+++|++++
T Consensus       116 t~~~~~~~~~~~Gi---~v~fvd~~~~~~~~l~~--------~~------tklv~~e~~snpt~~v~Di~~I~~la~~~~  178 (384)
T PRK06434        116 TFYFFNKVLKTLGI---HVDYIDTDRLNSLDFDP--------SN------YDLIYAESITNPTLKVPDIKNVSSFCHEND  178 (384)
T ss_pred             HHHHHHHHHHhcCc---EEEEECCCChhheeecC--------CC------eeEEEEEcCCCCCceeecHHHHHHHHHHcC
Confidence             2234466778899   99999987533333332        11      237888999999999999999999999998


Q ss_pred             CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842          277 IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV  354 (499)
Q Consensus       277 ~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  354 (499)
                        ++||++++.....-    ++-   .++|.+++|+||+++++.+  .|++.+++++...+.....     .        
T Consensus       179 --lvVD~t~~s~~~~~----pl~---~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~-----~--------  236 (384)
T PRK06434        179 --VIVDATFASPYNQN----PLD---LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERR-----K--------  236 (384)
T ss_pred             --eEEECCCCCcccCC----chh---cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHH-----H--------
Confidence              56799996543211    111   1499999999999998765  6777776654322211100     0        


Q ss_pred             ccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----------CceEEEEE
Q 010842          355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----------HFALVCFR  423 (499)
Q Consensus       355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------~~~~v~f~  423 (499)
                              ..+.....+..|+.++.  .+.+..++++..++++.+.+.|+++|.++-+.-|           ..++++|.
T Consensus       237 --------~~G~~~~~~~A~l~~~g--L~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~  306 (384)
T PRK06434        237 --------TLGSNPDPIQAYLALRG--LKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFE  306 (384)
T ss_pred             --------hcCCCCCHHHHHHHHhC--CCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEE
Confidence                    01222245666766654  4889999999999999999999999988543322           24578888


Q ss_pred             ec
Q 010842          424 LN  425 (499)
Q Consensus       424 ~~  425 (499)
                      +.
T Consensus       307 l~  308 (384)
T PRK06434        307 LR  308 (384)
T ss_pred             EC
Confidence            75

>PLN02368 alanine transaminase

Probab=99.76  E-value=6.2e-16  Score=156.98  Aligned_cols=280  Identities=12%  Similarity=0.001  Sum_probs=186.8

Q ss_pred             hHHHHHHHHHHHc--ccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh
Q 010842          102 TAGFLGEMLCACF--NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD  179 (499)
Q Consensus       102 ~~~~~~~~l~~~~--n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~  179 (499)
                      ++..+.+.+....  +.....|....+..++.+++.+|+.+..|++-+.     ...++|+|+++++..++.+....   
T Consensus        82 p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-----~~I~it~Ga~~al~~~~~~l~~~---  153 (407)
T PLN02368         82 PADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDP-----ELIFLTDGASKGVMQILNAVIRG---  153 (407)
T ss_pred             CHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEcccHHHHHHHHHHHHcCC---
Confidence            4555555554421  2223457666677899999999999888864221     14689999999988777765311   


Q ss_pred             HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc
Q 010842          180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST  259 (499)
Q Consensus       180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~  259 (499)
                             ++..|+++.+++..+...++..|.   +++.||++++.+|.+|+++|++.+++...++.++.+++.+.++|||
T Consensus       154 -------pGd~Vli~~P~Y~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPT  223 (407)
T PLN02368        154 -------EKDGVLVPVPQYPLYSATISLLGG---TLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPT  223 (407)
T ss_pred             -------CCCEEEEeCCCCccHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCC
Confidence                   567788999999999999999999   9999999876568999999999997643333345678899999999


Q ss_pred             ccc---CChhHHHHHHHHhCCEEEeeccccchhccCc-cc---hhhhcCC----CC-Cc-eeEecccccc-cC-CCcceE
Q 010842          260 TAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICP-EF---RHYLNGI----ER-VD-SFSFSPHKWL-LS-YLDCCC  324 (499)
Q Consensus       260 G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~-~~---~~~~~g~----~~-aD-si~~~~hK~l-~~-p~~~g~  324 (499)
                      |.+   +.+++|+++|++||+|+++|.+|+.+.+... .+   ......+    +. .. .+..+..|.+ +. ..-+|+
T Consensus       224 G~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy  303 (407)
T PLN02368        224 GQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGY  303 (407)
T ss_pred             CccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEE
Confidence            999   5567788889999999999999987654221 11   1111111    11 12 3445689997 44 466898


Q ss_pred             EEE--eCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH------------HHHHHHHH
Q 010842          325 LWV--KQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV------------LNLQSHIR  390 (499)
Q Consensus       325 l~~--r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~------------~g~~~~~~  390 (499)
                      +++  .++..+ +.+.... ....                    ....+..+++...+..            +..+++.+
T Consensus       304 ~i~~~~~~~li-~~~~~~~-~~~~--------------------~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~  361 (407)
T PLN02368        304 FEMTNIPPKTV-EEIYKVA-SIAL--------------------SPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILE  361 (407)
T ss_pred             EEEeCCCHHHH-HHHHHHh-cccC--------------------CCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHH
Confidence            875  233333 2221111 0000                    0123444555544421            11234567


Q ss_pred             HHHHHHHHHHHHHhcCCCeEEEcCCCceEEEE
Q 010842          391 SDIRLAKMFEGFVKSDPRFEIVVPRHFALVCF  422 (499)
Q Consensus       391 ~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f  422 (499)
                      ...+.++.+.+.|+++|++.+. .|+...+.|
T Consensus       362 ~~~~rr~~~~~~L~~~~g~~~~-~P~Gafy~~  392 (407)
T PLN02368        362 SLRRRARMMTDGFNSCKNVVCN-FTEGAMYSF  392 (407)
T ss_pred             HHHHHHHHHHHHHhCCCCeEeC-CCCeeeEec
Confidence            7788889999999999998865 566666665

>PRK03317 histidinol-phosphate aminotransferase; Provisional

Probab=99.76  E-value=1.7e-15  Score=153.02  Aligned_cols=296  Identities=14%  Similarity=0.057  Sum_probs=196.7

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK  203 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k  203 (499)
                      .++...+.+++.+|+.+..|.+-+.     ...++|+|+++++..++.+..+           ++..|++..+++..+..
T Consensus        64 ~~g~~~lr~aia~~~~~~~~~~~~~-----~~I~it~G~~~~l~~~~~~~~~-----------~gd~v~v~~P~y~~~~~  127 (368)
T PRK03317         64 DRDAVALRADLAAYLTAQTGVGLTV-----ENVWAANGSNEILQQLLQAFGG-----------PGRTALGFVPSYSMHPI  127 (368)
T ss_pred             CCchHHHHHHHHHHhhhhccCCCCh-----hhEEECCCHHHHHHHHHHHhcC-----------CCCEEEEeCCChHHHHH
Confidence            3566789999899998887764221     2468899999988877776542           56678888999999999


Q ss_pred             HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeec
Q 010842          204 VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDA  283 (499)
Q Consensus       204 a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~  283 (499)
                      +++..|.   +++.+|.++  +|.+|+++|++++.+..     +.+|+.+.++||||.+-+.+++.++|+.+++++++|.
T Consensus       128 ~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~~~~~~-----~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE  197 (368)
T PRK03317        128 IARGTHT---EWVEGPRAA--DFTLDVDAAVAAIAEHR-----PDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDE  197 (368)
T ss_pred             HHHhcCC---eeEEcccCC--CCCCCHHHHHHHHhccC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeC
Confidence            9998888   888877653  47899999999986421     2257778999999999999999999999999999999


Q ss_pred             cccchhccC-ccchhhhcCCCCCc-eeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCC
Q 010842          284 AYAGSACIC-PEFRHYLNGIERVD-SFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKD  359 (499)
Q Consensus       284 A~g~~~~~~-~~~~~~~~g~~~aD-si~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~  359 (499)
                      +|+.+.... +........  .-+ .++.+..|.++.| ..+|+++... +.. +.+.. ...|                
T Consensus       198 ~y~~~~~~~~~~~~~~~~~--~~~~i~~~SfSK~~g~~GlRiG~~~~~~-~~~-~~l~~~~~~~----------------  257 (368)
T PRK03317        198 AYAEFRRSGTPSALTLLPE--YPRLVVSRTMSKAFAFAGGRLGYLAAAP-AVV-DALRLVRLPY----------------  257 (368)
T ss_pred             CchhhcccCCcCHHHHHHh--CCCEEEEEechhhhccchhhhhhhhCCH-HHH-HHHHhcCCCC----------------
Confidence            998753211 111111111  123 3455899999754 5568877643 322 33321 1011                


Q ss_pred             cccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHH
Q 010842          360 WQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEML  438 (499)
Q Consensus       360 ~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~  438 (499)
                             ....+...++...+. .+.+.+.+++..+..+++.+.|++. ++++. ++..+.+.|...+ .          
T Consensus       258 -------~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~-~----------  317 (368)
T PRK03317        258 -------HLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL-GLRVA-PSDANFVLFGRFA-D----------  317 (368)
T ss_pred             -------CCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEeC-CCCCcEEEEeccC-C----------
Confidence                   011233333333332 2344555666677778888888886 77755 4555555442211 1          


Q ss_pred             HHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          439 NRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       439 ~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      ...+.+.|.++|..+ .+.  ....++|++++    +.++++.++++|+++.+.
T Consensus       318 ~~~~~~~l~~~Gv~v-~~~--~~~~~iRi~~~----~~~~~~~~~~~l~~~~~~  364 (368)
T PRK03317        318 RHAVWQGLLDRGVLI-RDV--GIPGWLRVTIG----TPEENDAFLAALAEVLAT  364 (368)
T ss_pred             HHHHHHHHHHCCEEE-EeC--CCCCeEEEecC----CHHHHHHHHHHHHHHHHH
Confidence            356777787888544 332  23468999984    678899999999887653

>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase

Probab=99.76  E-value=2.3e-15  Score=150.30  Aligned_cols=322  Identities=13%  Similarity=0.115  Sum_probs=199.6

Q ss_pred             cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCC
Q 010842          119 FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQT  197 (499)
Q Consensus       119 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~  197 (499)
                      ..|..+|...+||++    +++++|++..         +.|++||.|...+. .+           ++ ++.+|  +...
T Consensus        65 e~yag~~s~~~lE~~----va~~~G~~~a---------v~v~sGT~Al~ll~-~l-----------~l~pGDeV--psn~  117 (450)
T TIGR02618        65 EAYAGSRNFYHLERT----VRELYGFKYV---------VPTHQGRGAENLLS-QI-----------AIKPGDYV--PGNM  117 (450)
T ss_pred             hhhcCCCcHHHHHHH----HHHHHCCCeE---------EEcCCHHHHHHHHH-Hh-----------CCCCcCEE--CCce
Confidence            468999999999999    8889998864         99999999955432 22           11 34455  5678


Q ss_pred             chhHHHH-HHHhCCCCCCeEEeeCCC--------CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc-ccc---CC
Q 010842          198 HSTFAKV-CKLAGVSPANIRALPTSV--------DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST-TAV---DN  264 (499)
Q Consensus       198 H~s~~ka-~~~~G~g~~~v~~v~~~~--------~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~-G~i---d~  264 (499)
                      |+...++ +...|.   .++-++.++        ..++.+|+++|+++|++... ...| +|+++..+|.. |..   ++
T Consensus       118 ~f~Tt~ahIe~~Ga---v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~-~~~~-lV~~e~t~N~~GG~pvs~~~  192 (450)
T TIGR02618       118 YFTTTRYHQEKNGA---TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGA-DKIP-YICLAVTVNLAGGQPVSMAN  192 (450)
T ss_pred             eHHHHHHHHHhCCe---EEEeeecccccccccCCCCCCCcCHHHHHHHhccccC-cccC-ceEEEEecccCCCeeCCHHH
Confidence            8777776 677787   666664431        12468999999999985321 1233 45555555544 677   67


Q ss_pred             hhHHHHHHHHhCCEEEeeccccch-hccCc----cchh--h---hc-CCCCCceeEecccccccCCCcceEEEEeCchhH
Q 010842          265 VEPLAEVANEYGIWVHVDAAYAGS-ACICP----EFRH--Y---LN-GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLL  333 (499)
Q Consensus       265 l~~I~~ia~~~~~~lhvD~A~g~~-~~~~~----~~~~--~---~~-g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l  333 (499)
                      +++|.++|++||+++|.|||+... +++..    .+..  .   .. -...+|++++++||.+++|. .|++.+++++..
T Consensus       193 l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~-GG~l~~~d~~l~  271 (450)
T TIGR02618       193 MREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNI-GGFLCMNDDEMF  271 (450)
T ss_pred             HHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCC-ceEEEeCCHHHH
Confidence            899999999999999999998652 33321    1111  0   01 13459999999999999996 577777888766


Q ss_pred             HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHH-HHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          334 VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNL-QSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       334 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~-~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                      .+.-.....| .+          +..++.-.+|...  ++..+|.    +.+ +...++....+++|.+.|.+. |+.++
T Consensus       272 ~k~r~~~~~~-eG----------~~tyGgla~r~~~--ala~gL~----e~~~~~y~~~r~~~a~~La~~L~~~-Gvpv~  333 (450)
T TIGR02618       272 QSAKELVVVF-EG----------MPSYGGLAGRDME--AMAIGIR----EAVDYEYIEHRVKQVRYLGDKLKAA-GVPIV  333 (450)
T ss_pred             HHHHHHhhhc-CC----------ccccCchhhhhHH--HHHHHHH----HhhhHHHHHHHHHHHHHHHHHHHHC-CCccc
Confidence            5443333222 11          1111111122111  1122222    222 256677778899999999998 89888


Q ss_pred             cCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEE-eeeE------C------CEEEEEEeccCCCCcHHH
Q 010842          413 VPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLT-HTIV------G------GLYMLRFAVGASLTDERH  478 (499)
Q Consensus       413 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~-~~~~------~------g~~~lRi~~~~~~~t~~d  478 (499)
                      .++..+.|.+.....-+.-.. ...-.+.+...|. +.|+=-+- ++..      .      .-..+|+++---.-|.++
T Consensus       334 ~p~ggh~V~vda~~~lph~~~-~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h  412 (450)
T TIGR02618       334 EPVGGHAVFLDARRFLPHIPQ-DQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAH  412 (450)
T ss_pred             CCCCcceEEEEhHHhCCCCCh-hhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhH
Confidence            777777777654321000000 0112344554444 34431111 1111      0      125799998533448999


Q ss_pred             HHHHHHHHHHHHHH
Q 010842          479 VVAAWELIMEGADR  492 (499)
Q Consensus       479 i~~l~~~l~~~~~~  492 (499)
                      +|.+.++|..+.++
T Consensus       413 ~~~v~~~~~~~~~~  426 (450)
T TIGR02618       413 MDVVADGIIKLYKH  426 (450)
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999988764

This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)

>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed

Probab=99.75  E-value=1.7e-15  Score=154.90  Aligned_cols=299  Identities=14%  Similarity=0.120  Sum_probs=179.9

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccC---CeEEEcCCCCchh
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMH---KLVVYGSDQTHST  200 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~---~~~i~~s~~~H~s  200 (499)
                      .+...++|++    |++++|.+.         .++++|||+|+..|+.++|......   .|.+   ..+|..+...|-+
T Consensus        82 ~~~~~~l~~~----l~~~~~~~~---------~~~~~SGs~A~e~al~~a~~~~~~~---~g~~~~~~~vi~~~~~~HG~  145 (401)
T PRK00854         82 NDQLAPLYEE----LAALTGSHK---------VLPMNSGAEAVETAIKAVRKWGYEV---KGVPEGQAEIIVCADNFHGR  145 (401)
T ss_pred             CHHHHHHHHH----HHhhCCCCE---------EEEeCCcHHHHHHHHHHHHHHHHhc---cCCCCCCceEEEECCCcCCc
Confidence            3444555555    778887643         4999999999999999998642111   1211   2345555555766


Q ss_pred             HHHHHHHhC-------CC--CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhH
Q 010842          201 FAKVCKLAG-------VS--PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEP  267 (499)
Q Consensus       201 ~~ka~~~~G-------~g--~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~  267 (499)
                      ..-+....+       .+  ..++..+|       ..|+++|++.|.+.+      .+|++..+.+++|.+.|    +++
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~~i~~~~------~aii~e~~~~~~G~~~~~~~~l~~  212 (401)
T PRK00854        146 TLSIVGFSTDPDARGGFGPFTPGFRVVP-------FGDAEALEAAITPNT------VAFLVEPIQGEAGVIIPPAGYFTR  212 (401)
T ss_pred             cHHHHhccCCccccccCCCCCCCeEEeC-------CCCHHHHHHHhCCCe------EEEEEccccCCCCCcCCCHHHHHH
Confidence            543332111       00  01233333       248899999886533      48889999999999976    999


Q ss_pred             HHHHHHHhCCEEEeeccccchhccCcc-chhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCccCCC
Q 010842          268 LAEVANEYGIWVHVDAAYAGSACICPE-FRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDPEYLK  345 (499)
Q Consensus       268 I~~ia~~~~~~lhvD~A~g~~~~~~~~-~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~~yl~  345 (499)
                      |.++|++||+++++|++|.++.. .+. +.....++ ..|.++++  |++...+ ..|+++.+++ .+ +.+...    .
T Consensus       213 l~~l~~~~gi~lI~DEv~~g~g~-~g~~~~~~~~g~-~~D~~~~~--K~l~gg~~~ig~v~~~~~-~~-~~l~~~----~  282 (401)
T PRK00854        213 VRELCTANNVTLILDEIQTGLGR-TGKLLAEEHEGI-EADVTLIG--KALSGGFYPVSAVLSNSE-VL-GVLKPG----Q  282 (401)
T ss_pred             HHHHHHHcCCEEEEechhhCCCC-CchHhHHhhcCC-CCCEEEec--ccccCCccCeEEEEEcHH-HH-hcccCC----C
Confidence            99999999999999999975422 221 11112233 26877774  9987653 4677777553 22 222110    0


Q ss_pred             CCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cCCCceEEEEEe
Q 010842          346 NKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VPRHFALVCFRL  424 (499)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~v~f~~  424 (499)
                      ..          .  +. ++   ..+..++++..+..-.-....++..++++++.+.|++.....+. ..+...++.+.+
T Consensus       283 ~~----------~--t~-~~---~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~g~g~~~~i~~  346 (401)
T PRK00854        283 HG----------S--TF-GG---NPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIRSNIVREVRGRGLMLAVEL  346 (401)
T ss_pred             CC----------C--CC-Cc---CHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhccCceEEEeccceEEEEEE
Confidence            00          0  00 11   33444444444421111236677888889999999876321111 123344555555


Q ss_pred             cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      .+..        ....++.+.|.++|+.+ .+   .+..++|+++ +..+|++||++++++|+++.
T Consensus       347 ~~~~--------~~~~~~~~~L~~~GV~v-~~---~~~~~lR~~p-~~~~t~e~i~~~i~~l~~~l  399 (401)
T PRK00854        347 EPEA--------GGARQYCEALKERGLLA-KD---THDHTIRLAP-PLVITREQVDWALEQIAKVL  399 (401)
T ss_pred             ecCc--------hhHHHHHHHHHHCCeEE-ec---CCCCEEEEeC-CcccCHHHHHHHHHHHHHHh
Confidence            3321        12456788888888543 22   2335799998 46789999999999998865

>PRK07582 cystathionine gamma-lyase; Validated

Probab=99.75  E-value=1.9e-16  Score=159.13  Aligned_cols=229  Identities=20%  Similarity=0.132  Sum_probs=156.7

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|....+|++    ++++.  ...        .+++++|+.|+..++.+...           ++..|+++...|+...
T Consensus        49 ~~p~~~~Le~~----lA~l~--~~~--------~v~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~y~~~~  103 (366)
T PRK07582         49 SNPTWRALEAA----LGELE--GAE--------ALVFPSGMAAITAVLRALLR-----------PGDTVVVPADGYYQVR  103 (366)
T ss_pred             CCccHHHHHHH----HHHHc--CCC--------EEEECCHHHHHHHHHHHhcC-----------CCCEEEEeCCCcHhHH
Confidence            45677788887    77776  222        48889999887776655421           5667888888887766


Q ss_pred             HHH----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 KVC----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                      ..+    ...|+   +++.|+.+++.  .        .+.+++      .+|++..++|++|.+.|+++|+++|+++|++
T Consensus       104 ~~~~~~l~~~G~---~v~~v~~~~~~--~--------~~~~~t------~lV~le~p~NPtg~v~di~~I~~~a~~~g~~  164 (366)
T PRK07582        104 ALAREYLAPLGV---TVREAPTAGMA--E--------AALAGA------DLVLAETPSNPGLDVCDLAALAAAAHAAGAL  164 (366)
T ss_pred             HHHHHHHhcCeE---EEEEECCCChH--H--------HhccCc------eEEEEECCCCCCCCccCHHHHHHHHHHcCCE
Confidence            544    34688   89998875321  1        112222      3678889999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      ++||++|+......|    . .  -.+|.++.+.|||+++|.+  .|+++.++++.. +.+.....+..           
T Consensus       165 lvVD~t~~~~~~~~p----~-~--~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~-~~l~~~~~~~g-----------  225 (366)
T PRK07582        165 LVVDNTTATPLGQRP----L-E--LGADLVVASDTKALTGHSDLLLGYVAGRDPELM-AAVERWRLLAG-----------  225 (366)
T ss_pred             EEEECCCCCccccCc----h-h--cCCcEEEecccccccCCCCeeEEEEEcCcHHHH-HHHHHHHHHhC-----------
Confidence            999999864321111    1 1  1489999999999988766  577776665433 22211111111           


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc------CC-----------CceE
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV------PR-----------HFAL  419 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~------~~-----------~~~~  419 (499)
                               -....+..|..++.+  +.+..++++..+++..+.+.|+++|.++-+.      .|           ..++
T Consensus       226 ---------~~~~~~~a~l~~r~l--~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~  294 (366)
T PRK07582        226 ---------AIPGPFEAWLAHRSL--GTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGL  294 (366)
T ss_pred             ---------CCCCHHHHHHHHhcc--ccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcce
Confidence                     011345667666655  5678889999999999999999999886543      12           3568


Q ss_pred             EEEEec
Q 010842          420 VCFRLN  425 (499)
Q Consensus       420 v~f~~~  425 (499)
                      ++|.+.
T Consensus       295 ~s~~~~  300 (366)
T PRK07582        295 VSFELA  300 (366)
T ss_pred             EEEEeC
Confidence            888885

>PRK07590 L,L-diaminopimelate aminotransferase; Validated

Probab=99.75  E-value=3.6e-15  Score=152.72  Aligned_cols=357  Identities=14%  Similarity=0.037  Sum_probs=211.0

Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCCccc--cccCCCCCChHHHHHHHHHHHccc-----CCcccccChhhHHHHHHHHHHHH
Q 010842           67 ESFETILKDVQEKIIPGITHWLSPNF--FAFFPATVSTAGFLGEMLCACFNS-----VGFNWLASPASTELEIVVMDWLA  139 (499)
Q Consensus        67 ~~~~~i~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~l~~~~n~-----~~~~~~~~p~~~~lE~~~~~~la  139 (499)
                      ..+.++.+.+.+.-.+    +..+..  ++.-..+..++..+.+.+...+..     ....|...++...+.+++.+|+.
T Consensus        15 ~~~~~~~~~~~~~~~~----~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~   90 (409)
T PRK07590         15 YLFPEIARRVNAFREA----NPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDY   90 (409)
T ss_pred             chHHHHHHHHHHHhhh----cCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHH
Confidence            3466666666554322    112222  222222222334455555554432     23456667788899999999988


Q ss_pred             HHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCC-----
Q 010842          140 TMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPAN-----  214 (499)
Q Consensus       140 ~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~-----  214 (499)
                      +..|++-+.     ...++|+|+++++.. +....+           ++..|++..+++..+...++..|.   .     
T Consensus        91 ~~~g~~~~~-----~~I~it~Ga~~al~~-l~~~~~-----------~gd~V~v~~P~Y~~~~~~~~~~g~---~~~~~~  150 (409)
T PRK07590         91 QARGCDISA-----DEIFISDGAKCDTGN-ILDIFG-----------PDNTIAVTDPVYPVYVDTNVMAGR---TGEANE  150 (409)
T ss_pred             HhcCCcCCh-----hhEEECCCHHHHHHH-HHHhcC-----------CCCEEEEeCCCCcchHHHHHHcCC---cccccc
Confidence            777763221     146888888887654 322211           566788899999999999999998   6     


Q ss_pred             ------eEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC---ChhHHHHHHHHhCCEEEeeccc
Q 010842          215 ------IRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD---NVEPLAEVANEYGIWVHVDAAY  285 (499)
Q Consensus       215 ------v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id---~l~~I~~ia~~~~~~lhvD~A~  285 (499)
                            ++.||++.++++..|.+.      .      .+.+|+++.++||||.+-   .+++|+++|++|++|+++|.+|
T Consensus       151 ~~~~~~~~~v~~~~~~~~~~d~~~------~------~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y  218 (409)
T PRK07590        151 DGRYSGIVYLPCTAENNFVPELPE------E------KVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAY  218 (409)
T ss_pred             cccccceeEeecccccCCcccCcc------c------CceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccc
Confidence                  888998755546655431      1      234677789999999994   4677888899999999999999


Q ss_pred             cchhccCccchhhhcCCCCC---ceeEecccccccCC-CcceEEEEeCchhHHHhhcCC------ccCCCCCCCCCCCcc
Q 010842          286 AGSACICPEFRHYLNGIERV---DSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD------PEYLKNKPSESNSVV  355 (499)
Q Consensus       286 g~~~~~~~~~~~~~~g~~~a---Dsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~------~~yl~~~~~~~~~~~  355 (499)
                      +.+....... ..+..+...   -.+..++.|.++.| .-+|+++..+. .+ +.+...      ..+.....       
T Consensus       219 ~~~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~-li-~~~~~~~~~~~~~~~~~~~~-------  288 (409)
T PRK07590        219 EAFISDPSLP-HSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPKE-LK-GKTSDGEGVSLNSLWNRRQS-------  288 (409)
T ss_pred             hhhccCCCCC-cchhhCCCcccceEEEecCccccCCcCceeEEEEcCHH-Hh-hhccccchhhhHHHHHHHHh-------
Confidence            8754311111 111122111   23456899999744 66888876442 22 111000      00000000       


Q ss_pred             cCCCcccCCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCc
Q 010842          356 DFKDWQVGTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGS  432 (499)
Q Consensus       356 ~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~  432 (499)
                          ...   .....+...++...+   +...+++..++..+.++.+.+.|++. ++++..+...+.+++++.+.-    
T Consensus       289 ----~~~---~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~g~~f~wi~~~~~~----  356 (409)
T PRK07590        289 ----TKF---NGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESA-GFEVYGGVNAPYIWVKTPDGM----  356 (409)
T ss_pred             ----hcc---cCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCcceEEEEECCCCC----
Confidence                000   001223334433333   34556667777778888899999887 677654434455666664321    


Q ss_pred             chhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          433 ADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       433 ~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                         +  ..++.+.+.+ .|.++..+..+.  +..++|+++.   .+++++++.++.|.++
T Consensus       357 ---~--~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~~l~rl~~~  408 (409)
T PRK07590        357 ---S--SWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAF---GSRENVLEAMERIKKA  408 (409)
T ss_pred             ---C--HHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEcc---CCHHHHHHHHHHHHhh
Confidence               1  2456666664 465444443332  3468999964   4688999999888764

>PRK04781 histidinol-phosphate aminotransferase; Provisional

Probab=99.75  E-value=1.3e-15  Score=153.51  Aligned_cols=289  Identities=11%  Similarity=0.034  Sum_probs=188.7

Q ss_pred             HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCC-eEEEcCCCCchhHHHHHHHhCCCC
Q 010842          134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHK-LVVYGSDQTHSTFAKVCKLAGVSP  212 (499)
Q Consensus       134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~-~~i~~s~~~H~s~~ka~~~~G~g~  212 (499)
                      +++.+++++|.+.+       ..++|+|+++++..++.+...           ++ ..|+++.+.+..+...++..|.  
T Consensus        64 lr~~ia~~~~~~~~-------~I~~t~G~~~~l~~~~~~~~~-----------~g~~~vlv~~p~y~~~~~~~~~~g~--  123 (364)
T PRK04781         64 LRSALAALYGCAPE-------QLLIGRGSDEAIDLLVRALCV-----------PGRDAVLVTPPVFGMYAVCARLQNA--  123 (364)
T ss_pred             HHHHHHHHhCcChH-------HEEEeCCHHHHHHHHHHHhcC-----------CCCCeEEEcCCChHHHHHHHHHcCC--
Confidence            34447777788654       468899999988777665422           33 5678888887778888899999  


Q ss_pred             CCeEEeeCCC-CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH--hCCEEEeeccccchh
Q 010842          213 ANIRALPTSV-DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE--YGIWVHVDAAYAGSA  289 (499)
Q Consensus       213 ~~v~~v~~~~-~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~--~~~~lhvD~A~g~~~  289 (499)
                       +++.||++. ++++.+|++++.+.+...     .+.+|+++.++||||.+-+.+++.++++.  +++|+++|++|+.+.
T Consensus       124 -~~~~v~~~~~~~~~~~d~~~l~~~~~~~-----~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~  197 (364)
T PRK04781        124 -PLVEVPLVDGADGFHADVPAIVAAALAS-----NAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFS  197 (364)
T ss_pred             -EEEEEecCCCccCCCcCHHHHHHHHhcc-----CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhc
Confidence             999999853 234788999986654321     13467778999999999998888888775  479999999998654


Q ss_pred             ccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC
Q 010842          290 CICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF  368 (499)
Q Consensus       290 ~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~  368 (499)
                      . .+..........+ -.+..++.|.++.| .-.|+++... +.. +.+....... .                     .
T Consensus       198 ~-~~~~~~~~~~~~~-vi~~~SfSK~~gl~GlRvGy~v~~~-~l~-~~l~~~~~~~-~---------------------~  251 (364)
T PRK04781        198 D-VPSAVGLLARYDN-LAVLRTLSKAHALAAARIGSLIANA-ELI-AVLRRCQAPY-P---------------------V  251 (364)
T ss_pred             C-CcchHHHHhhCCC-EEEEecChhhcccccceeeeeeCCH-HHH-HHHHhccCCC-C---------------------C
Confidence            2 1111111111111 25667899998854 6688877543 332 3332211100 0                     0


Q ss_pred             CcHHHHHHHHHh--c-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHH
Q 010842          369 KSLRLWMVLRSY--G-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDW  445 (499)
Q Consensus       369 ~al~~~~~l~~~--g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~  445 (499)
                      ..+...++...+  + .+.+.+.+++..+.++.+.+.|++++++..+.++..+.+.+++..            .+++.+.
T Consensus       252 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~------------~~~~~~~  319 (364)
T PRK04781        252 PTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFDD------------AEAAFQA  319 (364)
T ss_pred             CHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcCC------------HHHHHHH
Confidence            123333333343  2 234556666777888899999998888753445666666666532            3456777


Q ss_pred             HHhcCCEEEEeeeEC-CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          446 VNSTGRVYLTHTIVG-GLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       446 l~~~g~~~~~~~~~~-g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      +.++|+.+..+..+. ...++|++++    +.++.++++++|+++.
T Consensus       320 l~~~gI~v~~~~~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~  361 (364)
T PRK04781        320 LLAAGVVVRDQRAAPRLSDALRITLG----TPEQNDRVLAALQRTQ  361 (364)
T ss_pred             HHHCCeEEeeCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHHHH
Confidence            888887655544332 2468999996    6789999999998764

>PRK03321 putative aminotransferase; Provisional

Probab=99.75  E-value=5.4e-16  Score=155.73  Aligned_cols=288  Identities=14%  Similarity=0.066  Sum_probs=184.5

Q ss_pred             hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842          125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka  204 (499)
                      ++...++++    +++++|.+++       ..++++|+++++..++.+...           ++..|+++..++..+...
T Consensus        57 ~g~~~lr~~----ia~~~~~~~~-------~I~~~~G~~~~l~~~~~~~~~-----------~gd~Vli~~p~y~~~~~~  114 (352)
T PRK03321         57 MGAVELRAA----LAEHLGVPPE-------HVAVGCGSVALCQQLVQATAG-----------PGDEVIFAWRSFEAYPIL  114 (352)
T ss_pred             CcHHHHHHH----HHHHhCcCHH-------HEEECCCHHHHHHHHHHHhcC-----------CCCEEEeCCCCHHHHHHH
Confidence            455556655    7777777553       357787777766555443311           566788887777777778


Q ss_pred             HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH--hCCEEEee
Q 010842          205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE--YGIWVHVD  282 (499)
Q Consensus       205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~--~~~~lhvD  282 (499)
                      ++..|.   +++.+|.+++  +.+|++++++.+++++      .+|+.+.++|+||.+-|.++|.++|++  +++++++|
T Consensus       115 ~~~~g~---~~~~v~~~~~--~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~D  183 (352)
T PRK03321        115 VQVAGA---TPVQVPLTPD--HTHDLDAMAAAITDRT------RLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLD  183 (352)
T ss_pred             HHHcCC---EEEEccCCCC--CCCCHHHHHHhhccCC------CEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEe
Confidence            889999   9999998754  4899999999886533      367778999999999999999999987  59999999


Q ss_pred             ccccchhccCccchhhhcCCC-CCc-eeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842          283 AAYAGSACICPEFRHYLNGIE-RVD-SFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD  359 (499)
Q Consensus       283 ~A~g~~~~~~~~~~~~~~g~~-~aD-si~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  359 (499)
                      ++|+.+.... .....+.... .-+ .++.+..|.++.| ..+|+++.+ +... +.+....    .             
T Consensus       184 e~y~~~~~~~-~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~-~~~~-~~~~~~~----~-------------  243 (352)
T PRK03321        184 EAYVEYVRDD-DVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH-PEVI-AALRKVA----V-------------  243 (352)
T ss_pred             chHHHhccCc-CCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC-HHHH-HHHHHhc----C-------------
Confidence            9998664321 1111111111 123 3455788998754 457887764 3322 3322110    0             


Q ss_pred             cccCCCCCCCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHH
Q 010842          360 WQVGTGRRFKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEML  438 (499)
Q Consensus       360 ~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~  438 (499)
                           ......+...++...+ ..+.+.+.+++..+..+++.+.|++. ++.+. ++..+.+.++... .          
T Consensus       244 -----~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~-~~~g~~i~i~l~~-~----------  305 (352)
T PRK03321        244 -----PFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA-GWTVP-PSQANFVWLPLGE-R----------  305 (352)
T ss_pred             -----CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCCCEEEEeCCC-C----------
Confidence                 0011234444333333 23445555666666677788888876 66643 3444555555422 1          


Q ss_pred             HHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          439 NRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       439 ~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      ..++.+.|.+.|+.+ .+  + +..++|++++    +.++.++++++|+++.+
T Consensus       306 ~~~~~~~l~~~gI~v-~~--~-~~~~iRi~~~----~~~~~~~~~~al~~~~~  350 (352)
T PRK03321        306 TADFAAAAAEAGVVV-RP--F-AGEGVRVTIG----APEENDAFLRAARAWRA  350 (352)
T ss_pred             HHHHHHHHHHCCEEE-Ec--c-CCCcEEEeeC----CHHHHHHHHHHHHHHhc
Confidence            356777777788543 33  3 3345999984    78999999999988643

>PRK03244 argD acetylornithine aminotransferase; Provisional

Probab=99.75  E-value=2.4e-15  Score=153.61  Aligned_cols=294  Identities=15%  Similarity=0.125  Sum_probs=181.4

Q ss_pred             HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCC
Q 010842          132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVS  211 (499)
Q Consensus       132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g  211 (499)
                      .++.+++++++|.+..      ...++++||++|+..++..++..        | ++.+|.+....|.+...+....|..
T Consensus        88 ~~la~~l~~~~~~~~~------~~v~~~~sgsea~~~al~~~~~~--------g-~~~ii~~~~~yhg~~~~~~~~~~~~  152 (398)
T PRK03244         88 IALAERLVELLGAPEG------GRVFFCNSGAEANEAAFKLARLT--------G-RTKIVAAEGGFHGRTMGALALTGQP  152 (398)
T ss_pred             HHHHHHHHHhCCCCCC------CEEEEeCchHHHHHHHHHHHHHH--------C-CCeEEEECCCcCCccHHHHhccCCc
Confidence            4566678998885421      13599999999999999988763        1 2334444445565655555444421


Q ss_pred             C---------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCE
Q 010842          212 P---------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIW  278 (499)
Q Consensus       212 ~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~  278 (499)
                      .         .++..+|.       .|+++|++.+.+      .+.+|++....+++|.+-|    +++|.++|++||++
T Consensus       153 ~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~------~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~l  219 (398)
T PRK03244        153 AKRAPFEPLPGGVEHVPY-------GDVDALAAAVDD------DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGAL  219 (398)
T ss_pred             ccccCCCCCCCCceEeCC-------CCHHHHHHhhcC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence            0         02233332       378999988742      2446777777899999977    89999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK  358 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  358 (499)
                      +++|++|.++......+.....++ ..|.+++  .|+++..+..|.++.+++  +.+.+...   ...            
T Consensus       220 lI~DEv~~g~gr~g~~~~~~~~~~-~pDi~t~--sK~l~~G~~ig~~~~~~~--~~~~~~~~---~~~------------  279 (398)
T PRK03244        220 LVLDEVQTGIGRTGAWFAHQHDGV-TPDVVTL--AKGLGGGLPIGACLAFGP--AADLLTPG---LHG------------  279 (398)
T ss_pred             EEEeccccCCcccchHHhhhhhCC-CCCEEEE--chhhhCCcccEEEEEcHH--HHhhccCC---CCc------------
Confidence            999999986432211111112233 3677766  599987677899888764  22333210   000            


Q ss_pred             CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc--CCCceEEEEEecCCCCCCcchhH
Q 010842          359 DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV--PRHFALVCFRLNPYPHSGSADTE  436 (499)
Q Consensus       359 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~v~f~~~~~~~~~~~~~~  436 (499)
                       .+. .+.+........++..+..   ++..++..++.++|.+.|+++ ++.++.  .....++.+.+...         
T Consensus       280 -~t~-~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~~~i~~~~~---------  344 (398)
T PRK03244        280 -STF-GGNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLTAP---------  344 (398)
T ss_pred             -CCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhc-CCCceeeEeeccEEEEEEEecc---------
Confidence             001 1111122223333333332   245677778888899999875 222221  12344555655321         


Q ss_pred             HHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          437 MLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       437 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                       ...++.+++.++|..+ .+.   +..++|+++. ...|++||++++++|.++..++.
T Consensus       345 -~~~~~~~~l~~~Gv~~-~~~---~~~~iR~~p~-~~~t~~~i~~~~~~l~~~l~~~~  396 (398)
T PRK03244        345 -VAKAVEAAAREAGFLV-NAV---APDVIRLAPP-LIITDAQVDAFVAALPAILDAAA  396 (398)
T ss_pred             -HHHHHHHHHHHCCeEE-eec---CCCEEEEECC-CcCCHHHHHHHHHHHHHHHHhcc
Confidence             2467888888889654 331   2367999984 66899999999999999987654

>PRK06460 hypothetical protein; Provisional

Probab=99.75  E-value=4.3e-16  Score=156.95  Aligned_cols=288  Identities=19%  Similarity=0.171  Sum_probs=182.4

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC----
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT----  197 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~----  197 (499)
                      ...|...++|+.    +++++|.+.+         +++++|++|+..++.+...           ++..|+++...    
T Consensus        42 ~~~p~~~~L~~~----lA~l~g~~~~---------v~~~sG~~ai~~~l~al~~-----------~Gd~Vl~~~~~~~~t   97 (376)
T PRK06460         42 EANPTVLELTKK----IVELENAEMG---------VAFSSGMGAISTTALALLK-----------PGNSVLVHRDMFGRS   97 (376)
T ss_pred             CCCccHHHHHHH----HHHHhCCCcE---------EEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCCcCcH
Confidence            455777777777    8899998654         6778888887776665422           45567776543    


Q ss_pred             chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842          198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI  277 (499)
Q Consensus       198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~  277 (499)
                      +..+.+.++..|+   +++.++.+.       .+.+++.+++      .+.+|++..++|++|.+-|+++|+++|+++|+
T Consensus        98 y~~~~~~~~~~G~---~v~~~~~~~-------~~~l~~~~~~------~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~  161 (376)
T PRK06460         98 YRFFTDYLKNWGV---NVDASNPGS-------DNIIEKAKSK------RYDVVFVENITNPLLRVVDITELSKVCKENGS  161 (376)
T ss_pred             HHHHHHHHHhhCc---EEEEECCCC-------HHHHHHhcCC------CceEEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence            3345577888898   888887542       2334443322      23488899999999999999999999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV  355 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  355 (499)
                      +++||++|+.+...    ..+.   ..+|.++.+++|+++++.+  .|+++. +++.. +.+......+           
T Consensus       162 ~vivDea~~~~~~~----~~l~---~~~divv~S~sK~l~G~~~~~~G~~~~-~~~l~-~~l~~~~~~~-----------  221 (376)
T PRK06460        162 ILIVDATFSTPINQ----KPLE---LGADIVVHSASKFLAGHNDVIAGLAAG-YGKLL-NVIDQMRRTL-----------  221 (376)
T ss_pred             EEEEECCcCccccC----Chhh---cCCCEEEeecceeccCCCCceEEEEec-CHHHH-HHHHHHHHhc-----------
Confidence            99999999754211    1111   1379999999999875532  565554 44332 2221110000           


Q ss_pred             cCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-C-----C-----------Cce
Q 010842          356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-P-----R-----------HFA  418 (499)
Q Consensus       356 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~-----~-----------~~~  418 (499)
                               +-...+...|.+++  |.+.++.++++..++++++.+.|+++|.++-+. |     |           ..+
T Consensus       222 ---------g~~~~~~~a~~~l~--~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg  290 (376)
T PRK06460        222 ---------GTSLDPHAAYLTLR--GIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGG  290 (376)
T ss_pred             ---------CCCCCHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCce
Confidence                     00112344565554  558889999999999999999999998875432 2     1           246


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHh--c----C-C-EEE-Eeee-----E-------CC--EEEEEEeccCCCCc
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNS--T----G-R-VYL-THTI-----V-------GG--LYMLRFAVGASLTD  475 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~--~----g-~-~~~-~~~~-----~-------~g--~~~lRi~~~~~~~t  475 (499)
                      +++|.+.+.        .....++.+.|.-  .    | . -.+ .+..     .       .|  .+.+|+|++     
T Consensus       291 ~~s~~~~~~--------~~~~~~~~~~l~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG-----  357 (376)
T PRK06460        291 VLSFEVNGG--------QESALKVMKSLKLIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVG-----  357 (376)
T ss_pred             EEEEEEcCc--------HHHHHHHHHhCCcceeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEec-----
Confidence            788887532        1223455555421  1    1 0 011 1100     0       01  357999996     


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 010842          476 ERHVVAAWELIMEGADRL  493 (499)
Q Consensus       476 ~~di~~l~~~l~~~~~~l  493 (499)
                      -||.+.+++.|.++...+
T Consensus       358 lE~~~dl~~dl~~al~~~  375 (376)
T PRK06460        358 IEDVNDLIEDLDRALSTL  375 (376)
T ss_pred             cCCHHHHHHHHHHHHHhh
Confidence            357777888887776643

>PRK01533 histidinol-phosphate aminotransferase; Validated

Probab=99.75  E-value=9.2e-16  Score=154.38  Aligned_cols=288  Identities=12%  Similarity=0.109  Sum_probs=191.4

Q ss_pred             hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842          125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka  204 (499)
                      ++...+.++    +++.+|.+.+       ..++|+|+++++..++.+..+           ++..|+++.+++..+...
T Consensus        64 ~g~~~Lr~a----ia~~~~~~~~-------~I~vt~Gs~e~i~~~~~~l~~-----------~gd~vlv~~P~y~~~~~~  121 (366)
T PRK01533         64 GGATTLRQT----IANKLHVKME-------QVLCGSGLDEVIQIISRAVLK-----------AGDNIVTAGATFPQYRHH  121 (366)
T ss_pred             CCHHHHHHH----HHHHhCCCcc-------eEEECCCHHHHHHHHHHHhcC-----------CCCEEEEcCCcHHHHHHH
Confidence            344455555    6666788765       468999999988777766532           566788899999999999


Q ss_pred             HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHH---HHhCCEEEe
Q 010842          205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVA---NEYGIWVHV  281 (499)
Q Consensus       205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia---~~~~~~lhv  281 (499)
                      ++..|+   +++.||.+.   +.+|+++|+++++++++      +|+++.++||||.+-+.+++.+++   ++++ ++++
T Consensus       122 ~~~~g~---~v~~v~~~~---~~~d~~~l~~~~~~~~~------~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~ii  188 (366)
T PRK01533        122 AIIEGC---EVKEVALNN---GVYDLDEISSVVDNDTK------IVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVI  188 (366)
T ss_pred             HHHcCC---EEEEeecCC---CCcCHHHHHHHhCcCCc------EEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEE
Confidence            999999   999999863   37999999998865433      677889999999997766665555   4555 6778


Q ss_pred             eccccchhccCccchhhhcCCCC--CceeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccC
Q 010842          282 DAAYAGSACICPEFRHYLNGIER--VDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDF  357 (499)
Q Consensus       282 D~A~g~~~~~~~~~~~~~~g~~~--aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~  357 (499)
                      |.+|..+... ......+..+..  --.+..+..|.++.| .-+|+++.. +... +.+.. ...+              
T Consensus       189 De~y~~~~~~-~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~-~~~~-~~l~~~~~~~--------------  251 (366)
T PRK01533        189 DEAYYEYVTA-KDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH-EELI-EKLNVVRLPF--------------  251 (366)
T ss_pred             EccHHHhhcc-ccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC-HHHH-HHHHHhcCCC--------------
Confidence            9999754321 111111111111  235667889999755 557777653 3322 22211 1000              


Q ss_pred             CCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhH
Q 010842          358 KDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTE  436 (499)
Q Consensus       358 ~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~  436 (499)
                               ....+...++...+. .+.+++..+...+.++++.+.++.. ++++. ++..+.+.+++.+          
T Consensus       252 ---------~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~-~~~~nf~~~~~~~----------  310 (366)
T PRK01533        252 ---------NVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN-EIPFY-QSQTNFIFLPVEN----------  310 (366)
T ss_pred             ---------CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccC-CCcCcEEEEeCCC----------
Confidence                     112455555555553 3445566666677777888888776 67755 5666777766531          


Q ss_pred             HHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842          437 MLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       437 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~  496 (499)
                        ..++.+.|.++|+.+..   +  ..++|++++    +.++.++++++|+++.+...+.
T Consensus       311 --~~~~~~~l~~~GI~Vr~---~--~~~iRis~~----~~~~~~~l~~al~~~~~~~~~~  359 (366)
T PRK01533        311 --GGEIYEACAHAGFIIRP---F--PNGVRITVG----TREQNEGVISVLQQHFENKKRK  359 (366)
T ss_pred             --HHHHHHHHHHCCcEEcc---C--CCceEEeCC----CHHHHHHHHHHHHHHHHhcccc
Confidence              24577888888975543   2  256999996    7899999999999887655443

>PRK06425 histidinol-phosphate aminotransferase; Validated

Probab=99.75  E-value=1.2e-15  Score=151.69  Aligned_cols=278  Identities=11%  Similarity=0.035  Sum_probs=180.3

Q ss_pred             HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC
Q 010842          134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA  213 (499)
Q Consensus       134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~  213 (499)
                      +++.+++.+|.+..       ..++|+|+++++..++.. ..           ++. |++..+++..+...++..|+   
T Consensus        45 lr~~ia~~~~~~~~-------~I~it~Gs~~~l~~~~~~-~~-----------~~~-vv~~~P~y~~y~~~~~~~G~---  101 (332)
T PRK06425         45 IEDQIKIYTQGLKI-------KVLIGPGLTHFIYRLLSY-IN-----------VGN-IIIVEPNFNEYKGYAFTHGI---  101 (332)
T ss_pred             HHHHHHHHhCCCcc-------eEEECCCHHHHHHHHHHH-hC-----------CCc-EEEeCCChHHHHHHHHHcCC---
Confidence            33448888898765       468899999988776642 21           333 44457899999999999999   


Q ss_pred             CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEEeeccccchhc
Q 010842          214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSAC  290 (499)
Q Consensus       214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~  290 (499)
                      +++.||++.   +.+|.+.+++   .      .+.+|+++.++||||.+-+   +++|+++|+++++|+++|.+|+.+..
T Consensus       102 ~v~~vp~~~---~~~~~~~l~~---~------~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~  169 (332)
T PRK06425        102 RISALPFNL---INNNPEILNN---Y------NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVP  169 (332)
T ss_pred             eEEEEeCCc---ccCcHHHHhh---c------CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhcccc
Confidence            999999874   3556655542   1      2336777899999999855   67778888999999999999987643


Q ss_pred             cC-ccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842          291 IC-PEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGRR  367 (499)
Q Consensus       291 ~~-~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~  367 (499)
                      .. +......... .--.+..+..|.++.| .-+|+++..+ +.. +.+.. ...+                 .+     
T Consensus       170 ~~~~~~~~~~~~~-~~vi~~~SfSK~~~l~GlRiGy~v~~~-~li-~~l~~~~~~~-----------------~~-----  224 (332)
T PRK06425        170 NRAEEDVLLNRSY-GNVIIGRSLTKILGIPSLRIGYIATDD-YNM-KISRKITEPW-----------------SV-----  224 (332)
T ss_pred             ccchhHHHHhccC-CCEEEEeecHHhcCCchhhheeeecCH-HHH-HHHHHcCCCC-----------------cc-----
Confidence            11 1111111111 1124556789999855 5578887643 322 22221 1111                 00     


Q ss_pred             CCcHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHH
Q 010842          368 FKSLRLWMVLRSYGVLN-LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWV  446 (499)
Q Consensus       368 ~~al~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l  446 (499)
                       ..... ..+.....+. +++..+...+.++++.+.|++. ++++..++..+.+++++.  .          ..++.+.+
T Consensus       225 -~~~~~-~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~f~~~~~~--~----------~~~~~~~l  289 (332)
T PRK06425        225 -CDPAI-DFIRSIDLDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPSANFITFMIP--D----------AHDFYSYL  289 (332)
T ss_pred             -CHHHH-HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCceEEEEEcC--C----------HHHHHHHH
Confidence             11111 1122222222 3456777778888999999887 787765666666777653  2          35677788


Q ss_pred             HhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          447 NSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       447 ~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      .++|+.+..+..+.  +..++|+++.    +.++.++++++|+++.
T Consensus       290 ~~~gi~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~~  331 (332)
T PRK06425        290 LKNGILVRLLDDYECLGEQYIRIAIR----RRSFNIKLVNALRNFL  331 (332)
T ss_pred             HHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence            88886655544442  2468999996    6789999999998753

>PRK08153 histidinol-phosphate aminotransferase; Provisional

Probab=99.75  E-value=2.2e-15  Score=152.14  Aligned_cols=296  Identities=11%  Similarity=0.002  Sum_probs=192.3

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~  206 (499)
                      ...++++    +++.+|.+++       ..++|+|+++++..++.+..+           ++..|++..++|+.+...+.
T Consensus        69 ~~~Lr~~----ia~~~~~~~~-------~I~it~G~~~~l~~~~~~~~~-----------~gd~vlv~~p~y~~~~~~~~  126 (369)
T PRK08153         69 NHDLRHA----LAAHHGVAPE-------NIMVGEGIDGLLGLIVRLYVE-----------PGDPVVTSLGAYPTFNYHVA  126 (369)
T ss_pred             cHHHHHH----HHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEECCCcchHHHHHHH
Confidence            4456665    6666687654       458888888877666554422           56788899999999998889


Q ss_pred             HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh--CCEEEeecc
Q 010842          207 LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY--GIWVHVDAA  284 (499)
Q Consensus       207 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~--~~~lhvD~A  284 (499)
                      ..|.   +++.+|.+.+   .+|++++++.+...     .+.+|+.+.++||||.+-+.+++.++++.+  ++|+++|.+
T Consensus       127 ~~g~---~~~~vp~~~~---~~~~~~l~~~~~~~-----~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~  195 (369)
T PRK08153        127 GFGG---RLVTVPYRDD---REDLDALLDAARRE-----NAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEA  195 (369)
T ss_pred             HcCC---eEEEeeCCCC---CCCHHHHHHHhccc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCc
Confidence            9999   9999998643   58999887766422     123677788999999998888888777654  899999999


Q ss_pred             ccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842          285 YAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVG  363 (499)
Q Consensus       285 ~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~  363 (499)
                      |+.+... ...... .....--.+..+..|.++.| .-+|+++... +.. +.+.....+.                   
T Consensus       196 y~~~~~~-~~~~~~-~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~~-~~~-~~l~~~~~~~-------------------  252 (369)
T PRK08153        196 YCETAPA-GAAPPI-DTDDPNVIRMRTFSKAYGLAGARVGYAIGAP-GTI-KAFDKVRNHF-------------------  252 (369)
T ss_pred             hhhhcCc-ccchhh-hhcCCCEEEEecchHhccCcchheeeeecCH-HHH-HHHHHhhcCC-------------------
Confidence            9765321 111111 11111235567789999755 4578887643 222 2222111110                   


Q ss_pred             CCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHH
Q 010842          364 TGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKL  442 (499)
Q Consensus       364 ~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l  442 (499)
                         ....+..+++...+. .+.+++..+...++++++.+.|++. ++... ++..+.+.+.....        .....++
T Consensus       253 ---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~~~~--------~~~a~~l  319 (369)
T PRK08153        253 ---GMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDCGRD--------GAFARAV  319 (369)
T ss_pred             ---CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEECCCC--------cccHHHH
Confidence               012344444444443 3446666777778888888888876 66644 45555555544321        1235678


Q ss_pred             HHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          443 LDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       443 ~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      .++|.++|+.+..+....+..++|+++.    +++|++.++++|.++...+.+
T Consensus       320 ~~~l~~~Gi~v~~p~~~~~~~~iRis~~----~~~~~~~~~~al~~~~~~~~~  368 (369)
T PRK08153        320 LDGLIARDIFVRMPGVAPLDRCIRVSCG----PDEELDLFAEALPEALEAARK  368 (369)
T ss_pred             HHHHHHCCeEEeeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHHHhhc
Confidence            8888888865423333234568999985    689999999999998765543

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family

Probab=99.74  E-value=1.6e-15  Score=150.82  Aligned_cols=330  Identities=18%  Similarity=0.120  Sum_probs=190.1

Q ss_pred             CHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCc
Q 010842           68 SFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKT  147 (499)
Q Consensus        68 ~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~  147 (499)
                      ..++.++.+++.+..+-.. .--.|+|.-.. +.......+.+..+    .       +...+.+++.+.+++++|.+++
T Consensus         6 ~~~~~~~~~~~~~~~~~~~-~~~~ylgl~~~-~~~~~~~~~~~~~~----~-------g~~~~~~~Le~~lA~~~g~~~e   72 (346)
T TIGR03576         6 RREKALEIIREKISRGGRD-SLYDLTGLAGG-FKIDEEDLELLETY----V-------GPAIFEEKVQELGREHLGGPEE   72 (346)
T ss_pred             HHHHHHHHHHHHHhccCCc-cccccccCCCC-hhHHHHHHHHHHHh----c-------CCHHHHHHHHHHHHHHcCCCcc
Confidence            3467788888877655321 12246665422 22222223333332    1       2347777777889999999654


Q ss_pred             cccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEc--C-CCCchhHHHHHHHhCCCCCCeEEeeCCCCC
Q 010842          148 FMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYG--S-DQTHSTFAKVCKLAGVSPANIRALPTSVDA  224 (499)
Q Consensus       148 ~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~--s-~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~  224 (499)
                             ..++++||++||..++.+..+           ++..|++  + ...|.++...+++.|.   +++..      
T Consensus        73 -------~ilv~~gg~~a~~~~~~al~~-----------~gd~Vli~~~d~p~~~s~~~~~~l~ga---~~~~~------  125 (346)
T TIGR03576        73 -------KILVFNRTSSAILATILALEP-----------PGRKVVHYLPEKPAHPSIPRSCKLAGA---EYFES------  125 (346)
T ss_pred             -------eEEEECCHHHHHHHHHHHhCC-----------CCCEEEECCCCCCCchhHHHHHHHcCC---EEecc------
Confidence                   359999999999988876643           4555654  2 5799999999999998   65322      


Q ss_pred             CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccC-ccchhhhc
Q 010842          225 NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACIC-PEFRHYLN  300 (499)
Q Consensus       225 ~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~-~~~~~~~~  300 (499)
                         .|+++|+. . +      .+.+|+++ |++++|.+   +||++|+++|+++|+|++||.||+.+.... .. .... 
T Consensus       126 ---~~l~~l~~-~-~------~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~-~~~~-  191 (346)
T TIGR03576       126 ---DELSELKK-I-D------GTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQ-PPAL-  191 (346)
T ss_pred             ---CCHHHHhh-C-c------CceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCC-CCHH-
Confidence               13444322 1 1      12345554 56889998   899999999999999999999998754321 11 0101 


Q ss_pred             CCCCCceeEecccccccCCCcceEEEEeCchhHHHhh-cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHH
Q 010842          301 GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL-STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRS  379 (499)
Q Consensus       301 g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~  379 (499)
                      .. .+|.++.+.+|++.++. .|+++.+. ... +.+ ....+|...                     .....+++++..
T Consensus       192 ~~-~~divv~s~SKalaG~r-~G~v~~~~-~li-~~l~~~~~~~~~s---------------------~~~~~~~aa~~a  246 (346)
T TIGR03576       192 DL-GADLVVTSTDKLMDGPR-GGLLAGRK-ELV-DKIKSVGEQFGLE---------------------AQAPLLAAVVRA  246 (346)
T ss_pred             Hc-CCcEEEeccchhccccc-eEEEEeCH-HHH-HHHHHhhcCcccC---------------------ccHHHHHHHHHH
Confidence            11 26888999999774443 57766554 333 333 222222221                     012233444444


Q ss_pred             hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE
Q 010842          380 YGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV  459 (499)
Q Consensus       380 ~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~  459 (499)
                      +.....+.+.+...++++++.+.++.   +.+. ++..+.+.+++.+..         ..+...+.|.++|+++.....+
T Consensus       247 L~~~~~~~~~~~l~~r~~~~~~~l~~---~~~~-~~~~~f~~~~~~~~~---------~~~~~~~ll~~~gV~v~~~~~f  313 (346)
T TIGR03576       247 LEEFELSRIRDAFKRKEEVYLRLFDK---LNVE-RTPTGFVIKGVEEEK---------LIEIGLDLLRNYGIITITAVGM  313 (346)
T ss_pred             HhhccHHHHHHHHHHHHHHHHHHHHh---CCCC-cCCCeEEEEeCCCCC---------HHHHHHHHHHhCCEEEeCCccc
Confidence            42222234445555666666666663   3333 233344544553211         0123334455567655544333


Q ss_pred             C-CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          460 G-GLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       460 ~-g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      . ...++|++++.+.-++.+.+.++++|++.
T Consensus       314 ~~~~~~vRis~~~~~~~~~~~~~~~~al~~~  344 (346)
T TIGR03576       314 PGASKTLRFDLAAKDAERIGDDYLVEAVKDS  344 (346)
T ss_pred             CCCCCeEEEEEecChHHhcCHHHHHHHHHhc
Confidence            2 25689999974332333799999999764

Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.

>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase

Probab=99.74  E-value=3.5e-16  Score=159.83  Aligned_cols=239  Identities=15%  Similarity=0.190  Sum_probs=156.4

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--  200 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--  200 (499)
                      ..|...++|++    +++++|.+.         .+++++|++|+..++.+...           ++..|+++...|..  
T Consensus        55 ~~p~~~~le~~----lA~l~g~~~---------~v~~~sG~~Ai~~al~~l~~-----------~Gd~Vl~~~~~y~~t~  110 (418)
T TIGR01326        55 MNPTTDVLEQR----IAALEGGVA---------ALAVASGQAAITYAILNLAQ-----------AGDNIVSSSYLYGGTY  110 (418)
T ss_pred             CChhHHHHHHH----HHHHhCCCe---------EEEEccHHHHHHHHHHHHhC-----------CCCEEEEECCCcHHHH
Confidence            44666667766    999998754         39999999999888876532           45567777777643  


Q ss_pred             --HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          201 --FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       201 --~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                        +.+.+...|+   +++.++.+       |+++|++++.++++      +|++..++|++|.+.|+++|+++|+++|++
T Consensus       111 ~~~~~~~~~~G~---~v~~v~~~-------d~~~l~~~l~~~t~------~V~le~p~NPtg~v~dl~~I~~la~~~~i~  174 (418)
T TIGR01326       111 NLFKHTLKRLGI---EVRFVDPD-------DPEEFEKAIDENTK------AVFAETIGNPAINVPDIEAIAEVAHAHGVP  174 (418)
T ss_pred             HHHHHHHHHcCc---EEEEECCC-------CHHHHHHhcCcCCe------EEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence              3455677888   88888742       78999998876443      778889999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc-cc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV-VD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~-~~  356 (499)
                      +++|++|+.+....+    ..   ..+|.++.+.+|+++.+. ..|.++++..... ..... -..+.......... ..
T Consensus       175 livD~t~~~~~~~~~----l~---~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~-~~~~~-~~~~~~~~~~q~a~~~~  245 (418)
T TIGR01326       175 LIVDNTFATPYLCRP----ID---HGADIVVHSATKYIGGHGTAIGGVIVDGGKFD-WANGR-FPLFTTPDPSYHGLVFT  245 (418)
T ss_pred             EEEECCCchhhcCCc----hh---cCCeEEEECccccccCCccceEEEEEeccccc-ccccc-cccccCCCCccccchhh
Confidence            999999976532211    11   148999999999998753 2566666443211 00000 00000000000000 00


Q ss_pred             C-----------C-CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          357 F-----------K-DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       357 ~-----------~-~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                      .           . .+.-..|-...+...|..++  |.+.+..++++..+++..+.+.|.+.|++..+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~--~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V  311 (418)
T TIGR01326       246 ETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQ--GLETLSLRMERHVENALKVAEFLEAHPKVAWV  311 (418)
T ss_pred             hhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHC--CcccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence            0           0 00001111223445565444  44778888888889999999999999998654

This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.

>cd00610 OAT_like Acetyl ornithine aminotransferase family

Probab=99.74  E-value=3.7e-15  Score=153.00  Aligned_cols=316  Identities=13%  Similarity=0.096  Sum_probs=188.9

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~  206 (499)
                      ....+.++.+.+++++|.+.+       ..++++|||+|+..++.+++....        ++.+++.....|.+...++.
T Consensus        77 ~~~~~~~l~~~l~~~~~~~~~-------~v~~~~sgsea~~~al~~~~~~~~--------~~~ii~~~~~yhg~~~~~~~  141 (413)
T cd00610          77 YNEPAVELAELLLALTPEGLD-------KVFFVNSGTEAVEAALKLARAYTG--------RKKIISFEGAYHGRTLGALS  141 (413)
T ss_pred             CCHHHHHHHHHHHHhCCCCCC-------EEEEcCcHHHHHHHHHHHHHHHcC--------CCeEEEECCCcCCccHHHHH
Confidence            456677777779999985333       358999999999999999875320        23344444456766555544


Q ss_pred             HhCCC---------CCCeEEeeCCCC----CCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHH
Q 010842          207 LAGVS---------PANIRALPTSVD----ANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLA  269 (499)
Q Consensus       207 ~~G~g---------~~~v~~v~~~~~----~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~  269 (499)
                      ..+-.         ..+++.+|.+..    ..+..|+++|++.+++.   +..+.+|+++...+++|.+.|    +++|.
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~  218 (413)
T cd00610         142 LTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH---PEEVAAVIVEPIQGEGGVIVPPPGYLKALR  218 (413)
T ss_pred             hcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC---CCCEEEEEEccccCCCCCccCCHHHHHHHH
Confidence            43220         114667776521    12455899999988652   223556777777777898877    99999


Q ss_pred             HHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCC
Q 010842          270 EVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPS  349 (499)
Q Consensus       270 ~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~  349 (499)
                      ++|++||+++++|++|+++............++ ..|.++++  |+++.++.+|+++.++ +.. +.+.. ..+...   
T Consensus       219 ~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~g~~~g~~~~~~-~~~-~~~~~-~~~~~~---  289 (413)
T cd00610         219 ELCRKHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTLG--KGLGGGLPLGAVLGRE-EIM-DAFPA-GPGLHG---  289 (413)
T ss_pred             HHHHHcCCEEEEeccccCCCcCcchhhHhhcCC-CCCeEEEc--ccccCccccEEEEEcH-HHH-Hhhcc-CCCCCC---
Confidence            999999999999999986422111101111222 35776665  9998778889887653 322 33200 000000   


Q ss_pred             CCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEE--cCCCceEEEEEecC
Q 010842          350 ESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR-FEIV--VPRHFALVCFRLNP  426 (499)
Q Consensus       350 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~--~~~~~~~v~f~~~~  426 (499)
                                 +...+.+.....+..+++.+..   .++.++..++.+++.+.|++... ..++  ..+...++++.+.+
T Consensus       290 -----------~t~~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~  355 (413)
T cd00610         290 -----------GTFGGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVK  355 (413)
T ss_pred             -----------CCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEec
Confidence                       0001111122334444555433   34567777788888887776421 1111  13445667777654


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       427 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      ... ...........+.+.|.++|..+ .+..   ...+|++++ ...|++||++++++|+++
T Consensus       356 ~~~-~~~~~~~~~~~~~~~l~~~gv~v-~~~~---~~~lR~~~~-~~~t~~~i~~~~~~l~~~  412 (413)
T cd00610         356 DRA-TKPPDKELAAKIIKAALERGLLL-RPSG---GNVIRLLPP-LIITEEEIDEGLDALDEA  412 (413)
T ss_pred             CCC-cCCcchHHHHHHHHHHHHCCeEE-eecC---CCEEEEECC-CcCCHHHHHHHHHHHHHh
Confidence            210 00000123567888888888544 3321   356999984 778999999999999875

This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.

>PRK12566 glycine dehydrogenase; Provisional

Probab=99.74  E-value=1.6e-15  Score=162.72  Aligned_cols=362  Identities=10%  Similarity=0.061  Sum_probs=235.2

Q ss_pred             hhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHH-H------HHHHHHcccCCccccc
Q 010842           51 PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFL-G------EMLCACFNSVGFNWLA  123 (499)
Q Consensus        51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~------~~l~~~~n~~~~~~~~  123 (499)
                      |.++|..-+.++| .+.++.++++++.++..+|..   ...|.|.-..+...|+++ .      +|+++ |.+++...++
T Consensus        46 P~~ir~~~~l~lp-~~~sE~e~~~~~~~~a~kN~~---~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTa-YTPYQpEisQ  120 (954)
T PRK12566         46 PPAIRLNRPLDLP-AALDEQAALARLRGYAEQNQV---WTSLIGMGYHGTVTPTVILRNVLENPGWYTA-YTPYQPEIAQ  120 (954)
T ss_pred             CHHHhcCCCCCCC-CCCCHHHHHHHHHHHHhcCCC---ccccccccccCCcCcHHHHHHHHhCchhhhc-CCCCCchhhh
Confidence            6677655456777 468999999999998777765   446777554455556655 3      33333 4566666677


Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK  203 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k  203 (499)
                      +.....+|.+.  ++++|+|++-.       +..+..++|.+- .|+.+++.....       ++..+++++..|+....
T Consensus       121 G~Lqal~e~Qt--mi~~LtGm~va-------NASl~D~atA~a-EA~~ma~~~~~~-------k~~~~~v~~~~hP~~~~  183 (954)
T PRK12566        121 GRLEALLNFQQ--MTIDLTGLDLA-------NASLLDEATAAA-EAMALAKRVAKS-------KSNRFFVDEHCHPQTLS  183 (954)
T ss_pred             HHHHHHHHHHH--HHHHHhCchhh-------hhhhccchhHHH-HHHHHHHHHhhc-------CCCEEEECCCCCHHHHH
Confidence            88888888884  59999999864       347777777432 344434322110       24468899999988666


Q ss_pred             HHH----HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842          204 VCK----LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV  279 (499)
Q Consensus       204 a~~----~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l  279 (499)
                      .++    ..|+   +++.             ++|++.+.++      .+.|+++.|++ .|.+.|+++|++++|+.|..+
T Consensus       184 v~~t~~~~~g~---~i~~-------------~~~~~~~~~~------~~~v~vq~P~~-~G~i~d~~~i~~~~h~~gal~  240 (954)
T PRK12566        184 VLRTRAEGFGF---ELVV-------------DAVDNLAAHA------VFGALLQYPDT-HGEIRDLRPLIDQLHGQQALA  240 (954)
T ss_pred             HHHHhhhcCCc---EEEE-------------cchhhcCCCC------EEEEEEECCCC-ceEEccHHHHHHHHHHcCCEE
Confidence            544    3455   5543             2333333222      45777888765 899999999999999999975


Q ss_pred             EeeccccchhccCccchhhhcCCCCCceeEecccccccCC-----CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842          280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-----LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV  354 (499)
Q Consensus       280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-----~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  354 (499)
                      + +++--....+...     .|--+||.++.+.+-+ ++|     ...|++.++++     .....|+.+.+...+..+.
T Consensus       241 ~-~~~d~laL~ll~~-----Pge~GADI~vG~~Q~f-Gvp~~~GGP~ag~~a~~~~-----~~R~~PGRivG~s~D~~G~  308 (954)
T PRK12566        241 C-VAADLLSLLVLTP-----PGELGADVVLGSTQRF-GVPMGYGGPHAAYFACRDD-----YKRAMPGRIIGVSRDARGN  308 (954)
T ss_pred             E-EEeCHHHHhCCCC-----hhhcCCcEEeeCCCcC-CCCCCCCCCCeeeeeehHH-----HHhhCCCCccceeecCCCC
Confidence            5 4443222222111     1222499996666544 334     24788888873     2345677777766555444


Q ss_pred             ccCCCcccC----CCCCCC-------cHHHH-----HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce
Q 010842          355 VDFKDWQVG----TGRRFK-------SLRLW-----MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA  418 (499)
Q Consensus       355 ~~~~~~~~~----~sr~~~-------al~~~-----~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~  418 (499)
                      ..|. .++|    .-||-.       +-.++     +.+.++|.+|++++.++...++.+|++.|++ +|+++..++.+.
T Consensus       309 ~a~~-l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~~~~~fF~  386 (954)
T PRK12566        309 TALR-MALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEA-KGIKRLNRHFFD  386 (954)
T ss_pred             eeee-hhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh-cCCccccCCccc
Confidence            4432 1121    234432       12222     2344569999999999999999999999999 699998888888


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                      .+.+++.. .          ..++.++..+.|.-+-.   +++ ..+.+++ ...+|.+||+.+++++.
T Consensus       387 ~~~v~~~~-~----------~~~~~~~a~~~~~n~r~---~~~-~~~~~s~-de~~~~~~~~~~~~~f~  439 (954)
T PRK12566        387 TLTLEVGG-A----------QAAIIESAEAARINLRI---LGR-GRLGVSL-DETCDEATVARLFDIFL  439 (954)
T ss_pred             eEEEEccC-C----------HHHHHHHHHHCCCeeEE---eCC-CeEEEEe-CCCCCHHHHHHHHHHhc
Confidence            88887721 1          44566776677753322   222 3488898 59999999999999984

>PRK05967 cystathionine beta-lyase; Provisional

Probab=99.73  E-value=1e-15  Score=153.61  Aligned_cols=290  Identities=14%  Similarity=0.144  Sum_probs=188.1

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|....+|+.    ++.+-|.+.         .+++++|+.|+..++.+..+           ++..|+++...|.++.
T Consensus        62 gnPt~~~Le~~----la~le~~~~---------~v~~sSG~aAi~~~l~all~-----------~GD~Vlv~~~~Y~~~~  117 (395)
T PRK05967         62 GTPTTDALCKA----IDALEGSAG---------TILVPSGLAAVTVPFLGFLS-----------PGDHALIVDSVYYPTR  117 (395)
T ss_pred             CChHHHHHHHH----HHHHhCCCC---------EEEECcHHHHHHHHHHHhcC-----------CCCEEEEccCCcHHHH
Confidence            34555566665    777766443         38888899888877765532           6778999999998866


Q ss_pred             H----HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 K----VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 k----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                      .    .++..|+   ++..++.+       +.+.++++++++++      +|+++.++|+++.+.||++|+++|+++|++
T Consensus       118 ~l~~~~l~~~Gi---~v~~vd~~-------~~e~l~~al~~~Tk------lV~lesPsNP~l~v~dl~~I~~la~~~g~~  181 (395)
T PRK05967        118 HFCDTMLKRLGV---EVEYYDPE-------IGAGIAKLMRPNTK------VVHTEAPGSNTFEMQDIPAIAEAAHRHGAI  181 (395)
T ss_pred             HHHHHHHHhcCe---EEEEeCCC-------CHHHHHHhcCcCce------EEEEECCCCCCCcHHHHHHHHHHHHHhCCE
Confidence            4    4567788   88888542       34778888876654      899999999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      ++||++|+.....    +++-.   ++|.+..+..|++++..+  .|++. .+++...+.....                
T Consensus       182 vvVD~t~a~p~~~----~pl~~---GaDivv~S~tKy~~Gh~d~~~G~v~-~~~~~~~~l~~~~----------------  237 (395)
T PRK05967        182 VMMDNTWATPLYF----RPLDF---GVDISIHAATKYPSGHSDILLGTVS-ANEKCWPQLLEAH----------------  237 (395)
T ss_pred             EEEECCccCceec----ChhHc---CCCEEEEecccccCCCCCeeEEEEE-cCHHHHHHHHHHH----------------
Confidence            9999999765332    22222   499999999999765432  45444 3433221111000                


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEcC-----C-----------CceE
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFE-IVVP-----R-----------HFAL  419 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~-----~-----------~~~~  419 (499)
                           ...|-...+...|..++  |.+.+.-++++..++|..+.+.|+++|.++ +..|     |           ..++
T Consensus       238 -----~~~G~~~~p~da~l~~r--gl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~  310 (395)
T PRK05967        238 -----GTLGLCAGPDDTYQILR--GLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGI  310 (395)
T ss_pred             -----HHcCCCCCHHHHHHHHc--CcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceE
Confidence                 00122234556676655  558899999999999999999999999885 3322     1           1357


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHhc--C----CE--EEEeee----------ECCEEEEEEeccCCCCcHHHHHH
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNST--G----RV--YLTHTI----------VGGLYMLRFAVGASLTDERHVVA  481 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~--g----~~--~~~~~~----------~~g~~~lRi~~~~~~~t~~di~~  481 (499)
                      ++|.+....    ....+...++.+.|.--  +    ..  .+.+..          ..+ ..+|+|++     -||.+.
T Consensus       311 ~sf~l~~~~----~~~~~~~~~f~~~l~l~~~~~slG~~~sLi~~~~~~~~~~~~~~~~~-~liRlSvG-----lEd~~d  380 (395)
T PRK05967        311 FSFVLAAGP----EKGKAKAHAFLDALEIFGLGYSWGGYESLALHVKLGDRTVAKAPYAG-PVIRLQIG-----LEDVPD  380 (395)
T ss_pred             EEEEEcCCC----cccHHHHHHHHHhCCcceEccCCCCcceeeeeCCCChhHhhhccCCC-CeEEEEec-----cCCHHH
Confidence            888885320    00012234555554211  1    00  010000          111 47999996     346677


Q ss_pred             HHHHHHHHHHHH
Q 010842          482 AWELIMEGADRL  493 (499)
Q Consensus       482 l~~~l~~~~~~l  493 (499)
                      +++.|.+..+.+
T Consensus       381 Li~Dl~~Al~~~  392 (395)
T PRK05967        381 LKADLERGFAAA  392 (395)
T ss_pred             HHHHHHHHHHhh
Confidence            777777666543

>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes

Probab=99.73  E-value=5.3e-17  Score=144.80  Aligned_cols=166  Identities=24%  Similarity=0.199  Sum_probs=126.5

Q ss_pred             HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH-HHHHHhCCC
Q 010842          133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA-KVCKLAGVS  211 (499)
Q Consensus       133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~-ka~~~~G~g  211 (499)
                      ++.++++++++.+..       .+++++|||+|+..++.+++.           ++..|+++...|++.. ..+...|+ 
T Consensus         4 ~~~~~l~~~~~~~~~-------~~~~~~~~t~a~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~~~~~~g~-   64 (170)
T cd01494           4 ELEEKLARLLQPGND-------KAVFVPSGTGANEAALLALLG-----------PGDEVIVDANGHGSRYWVAAELAGA-   64 (170)
T ss_pred             HHHHHHHHHcCCCCC-------cEEEeCCcHHHHHHHHHHhCC-----------CCCEEEEeecccceehhhHHHhcCC-
Confidence            456779999963332       368999999999998888753           3456888888998888 88888999 


Q ss_pred             CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhcc
Q 010842          212 PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACI  291 (499)
Q Consensus       212 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~  291 (499)
                        +++.++.+.++....+.+.+++.     .....|.+++++++++++|...|+++|+++|+++|+++|+|++|+++...
T Consensus        65 --~~~~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~  137 (170)
T cd01494          65 --KPVPVPVDDAGYGGLDVAILEEL-----KAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASP  137 (170)
T ss_pred             --EEEEeccCCCCccchhhhhhhhc-----cccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEeccccccccc
Confidence              99999987654222333233332     12345778999999999999999999999999999999999999887654


Q ss_pred             CccchhhhcCCCCCceeEecccccccCCCcceEEEEe
Q 010842          292 CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVK  328 (499)
Q Consensus       292 ~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r  328 (499)
                      .+...   .....+|+++.++|||++. .++|++++|
T Consensus       138 ~~~~~---~~~~~~d~~~~s~~K~~~~-~~~G~l~~~  170 (170)
T cd01494         138 APGVL---IPEGGADVVTFSLHKNLGG-EGGGVVIVK  170 (170)
T ss_pred             ccccc---cccccCCEEEEEcccccCC-CceEEEEeC
Confidence            32211   1123599999999999998 699999875

PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis

>PLN02452 phosphoserine transaminase

Probab=99.73  E-value=1.9e-15  Score=150.43  Aligned_cols=339  Identities=12%  Similarity=0.025  Sum_probs=212.2

Q ss_pred             cccccCCCCCChH-HHHHHHHHHHcccCCc------ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH
Q 010842           91 NFFAFFPATVSTA-GFLGEMLCACFNSVGF------NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS  163 (499)
Q Consensus        91 ~~~~~~~~~~~~~-~~~~~~l~~~~n~~~~------~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt  163 (499)
                      |-+.|.|++...| .++..+....+|-+..      ..-.++...++-+++.+.|.++++.|+++     .-.++++|||
T Consensus         7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y-----~v~~l~Gsgt   81 (365)
T PLN02452          7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNY-----EVLFLQGGAS   81 (365)
T ss_pred             ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEeCccH
Confidence            4567788877655 4445555555442211      11236778888899999999999997653     1235668888


Q ss_pred             HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCC--ccCHHHHHHHHHH
Q 010842          164 DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANF--SLSPQLLRRAVEA  239 (499)
Q Consensus       164 ~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~--~~d~~~L~~~i~~  239 (499)
                      .+.-+++......          .+.+.++. ...++  +.+.++.+|.   ..+...... +++  ..++++++.    
T Consensus        82 ~~~ea~~~nl~~~----------~~~~l~~~-~G~fg~r~~~~a~~~g~---~~~~~~~~~-~~~~~~~~~~~~~~----  142 (365)
T PLN02452         82 TQFAAIPLNLCKP----------GDKADFVV-TGSWSKKAAKEAKKYCK---TNVIASGKD-EKYTKIPSVSEWEL----  142 (365)
T ss_pred             HHHHHHHHhcCCC----------CCeEEEEE-CCHHHHHHHHHHHHhCC---CcEEEecCC-CCCCCCCChHHcCC----
Confidence            7665555543221          12233333 45555  6667777776   344332111 211  456666421    


Q ss_pred             HHHcCCccEEEEEecCCCcccc-cCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccC
Q 010842          240 DVEAGLVPLFLCATVGTTSTTA-VDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLS  318 (499)
Q Consensus       240 ~~~~g~~p~~vv~t~gtt~~G~-id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~  318 (499)
                      +    ..+.+|..++..|.+|. +.|++++.+      +.++||++...+....+-        +..+.+..++||.++ 
T Consensus       143 ~----~~~~~v~~~hnETstGv~~~~~~~i~~------~~lvVDa~Ss~g~~pidv--------~~~~v~~~saqK~lG-  203 (365)
T PLN02452        143 T----PDAKFVHICANETIHGVEFKDYPDVGN------VPLVADMSSNFLSKPVDV--------SKYGVIYAGAQKNVG-  203 (365)
T ss_pred             C----CCCcEEEECCCCCCCcEecCcccccCC------CeEEEECCccccCcccCH--------HHcCEEEEecccccC-
Confidence            1    12458999999999999 599988863      799999987665443321        123445579999986 


Q ss_pred             CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHH-HHHHHHHHHHHHH
Q 010842          319 YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVL-NLQSHIRSDIRLA  396 (499)
Q Consensus       319 p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~-g~~~~~~~~~~~a  396 (499)
                      |.|.|++++|++.. .+.-...+.|+.....       ....+...+.+. ....+..+++.+-.+ |++.+.++..+++
T Consensus       204 P~Gl~~v~vr~~~l-~~~~~~~~~~~~~~~~-------~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a  275 (365)
T PLN02452        204 PSGVTIVIIRKDLI-GNARPITPGMLDYKIH-------AENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKA  275 (365)
T ss_pred             CCCeEEEEEcHHHH-hhcccCCCchhhHHHH-------HhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence            88999999987643 2221222333221100       000001111111 123455567766555 8999999999999


Q ss_pred             HHHHHHHhcCCCeEEE-cC---CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCC
Q 010842          397 KMFEGFVKSDPRFEIV-VP---RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGAS  472 (499)
Q Consensus       397 ~~l~~~L~~~~~~~~~-~~---~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~  472 (499)
                      +++++.|++.+|+... .+   ....+++|++...         .+.+++.+.+.++|.+.+.+...-|.  +|+++. .
T Consensus       276 ~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~---------~~~~~f~~~~~~~g~~~~~G~r~~gg--~R~s~y-n  343 (365)
T PLN02452        276 DLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGS---------ELEAEFVKEAAKAGMVQLKGHRSVGG--MRASIY-N  343 (365)
T ss_pred             HHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCc---------hhHHHHHHHHHHCCCcccCCccccCc--eEEECc-C
Confidence            9999999998887221 11   1234788887552         25788999999999766555433332  999996 6


Q ss_pred             CCcHHHHHHHHHHHHHHHHH
Q 010842          473 LTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       473 ~~t~~di~~l~~~l~~~~~~  492 (499)
                      .++.++++.|++.++++.++
T Consensus       344 a~~~~~v~~L~~~m~~f~~~  363 (365)
T PLN02452        344 AMPLAGVEKLVAFMKDFQAK  363 (365)
T ss_pred             CCCHHHHHHHHHHHHHHHHh
Confidence            78999999999999998764

>PTZ00376 aspartate aminotransferase; Provisional

Probab=99.73  E-value=3.7e-15  Score=152.29  Aligned_cols=323  Identities=12%  Similarity=0.037  Sum_probs=200.2

Q ss_pred             HHHHHHHHHcc-cCCcccccChhhHHHHHHHHHHHHHHcCC--CCccccCCCccEE--EcCChHHHHHHHHHHHHHHHHh
Q 010842          105 FLGEMLCACFN-SVGFNWLASPASTELEIVVMDWLATMLKL--PKTFMFSGTGGGV--IQNTTSDSILVTLIAARDRALD  179 (499)
Q Consensus       105 ~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~--~~~~~~~~~~~g~--~t~ggt~A~~~al~~ar~~~~~  179 (499)
                      .+.+.+..... .....|....+..++.+++.+|+.+..+.  +++       ..+  .|.||+.|...++.+.+.- . 
T Consensus        51 ~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~-------~v~~~~t~G~~~al~~~~~~l~~~-~-  121 (404)
T PTZ00376         51 SVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEK-------RIATVQALSGTGALRLGFEFLKRF-L-  121 (404)
T ss_pred             HHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccC-------eEEEeeccCcchHHHHHHHHHHHh-c-
Confidence            34444433332 22356777778899999999888655432  222       233  3889888877666543211 1 


Q ss_pred             HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc
Q 010842          180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST  259 (499)
Q Consensus       180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~  259 (499)
                            .++..|++.++++..+...++.+|+   +++.||+.+++++.+|++.+++++.+..   ....+++.+.++|||
T Consensus       122 ------~~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~l~~~~~~~~d~~~l~~~~~~~~---~~~~~~~~~~p~NPT  189 (404)
T PTZ00376        122 ------PAGTTVYVSNPTWPNHVNIFKSAGL---NVKEYRYYDPKTKGLDFDGMLEDLRTAP---NGSVVLLHACAHNPT  189 (404)
T ss_pred             ------CCCCEEEEcCCCchhHHHHHHHcCC---ceeeccccCcccCCcCHHHHHHHHHhCC---CCCEEEEeCCCCCCC
Confidence                  1577899999999999999999999   9999998543357999999999986431   112467778999999


Q ss_pred             ccc---CChhHHHHHHHHhCCEEEeeccccchhccCc--cchhh--hcCCCCCceeEecccccccCC-CcceEEE--EeC
Q 010842          260 TAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICP--EFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLW--VKQ  329 (499)
Q Consensus       260 G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~--~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~--~r~  329 (499)
                      |.+   +.+++|+++|++|++|+++|.+|..+.....  .....  +.....--.++.+..|.++.| .-+|+++  +.+
T Consensus       190 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~~  269 (404)
T PTZ00376        190 GVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCAN  269 (404)
T ss_pred             CCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeCC
Confidence            999   5578888999999999999999987644210  11111  111111124567789999854 6688875  345


Q ss_pred             chhHH---HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH--------HHHHHHHHHHHHHHHH
Q 010842          330 PGLLV---KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV--------LNLQSHIRSDIRLAKM  398 (499)
Q Consensus       330 ~~~l~---~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~--------~g~~~~~~~~~~~a~~  398 (499)
                      ++...   ..+.....+...                 +   ...+..+++...+..        +.+++..++..+.++.
T Consensus       270 ~~~~~~l~~~~~~~~~~~~~-----------------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~  329 (404)
T PTZ00376        270 KEEAANVLSQLKLIIRPMYS-----------------S---PPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQL  329 (404)
T ss_pred             HHHHHHHHHHHHHHHhhhcC-----------------C---CchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            43221   111110000000                 0   012334444444421        1234445566778888


Q ss_pred             HHHHHhcCC---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCc
Q 010842          399 FEGFVKSDP---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTD  475 (499)
Q Consensus       399 l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t  475 (499)
                      +.+.|++..   +++.. +|..+.+.|-  ..           ..+++++|.++..+++.+.   +    |+++++  .+
T Consensus       330 l~~~L~~~~~~~~~~~~-~p~gg~f~~~--~~-----------~~~~~~~L~~~~~v~v~p~---~----Ris~~~--~~  386 (404)
T PTZ00376        330 LYDELKALGSPGDWEHI-INQIGMFSFT--GL-----------TKEQVERLIEKYHIYLLDN---G----RISVAG--LT  386 (404)
T ss_pred             HHHHHHhcCCCCccccc-ccCceEEEec--CC-----------CHHHHHHHHHhCCEeecCC---C----eEEEec--cC
Confidence            888888762   24333 3444444332  11           1345666776644454443   2    999952  78


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010842          476 ERHVVAAWELIMEGAD  491 (499)
Q Consensus       476 ~~di~~l~~~l~~~~~  491 (499)
                      .++++.++++|+++..
T Consensus       387 ~~~~~~~~~~l~~~~~  402 (404)
T PTZ00376        387 SKNVDYVAEAIHDVVR  402 (404)
T ss_pred             HHhHHHHHHHHHHHHh
Confidence            8999999999998764

>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type

Probab=99.73  E-value=4.7e-16  Score=154.82  Aligned_cols=340  Identities=13%  Similarity=0.012  Sum_probs=209.0

Q ss_pred             hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      +|.+..+.+.+.+-   ...-.+|...++-+++.+.|.++++.+.++     .-.++++|||.+.-.++......     
T Consensus        15 ~~~~~~~~~~~~~~---~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~-----~v~~l~GsGT~a~Eaa~~nl~~~-----   81 (374)
T TIGR01365        15 RPGWSIEELKNAPL---GRSHRSKLGKEKLAEAIKKTREMLGVPADY-----LIGIVPASDTGAVEMALWSMLGC-----   81 (374)
T ss_pred             CchhhHHHHhhhhc---ccCcCCHHHHHHHHHHHHHHHHHhCCCCCc-----EEEEECCchHHHHHHHHHHcCCC-----
Confidence            45554444443321   112347888999999999999999986442     12367999998766665544311     


Q ss_pred             hhhccCCeEEEcCCCCchh--HH-HHHHHhCCCCCC-eEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC
Q 010842          182 GAENMHKLVVYGSDQTHST--FA-KVCKLAGVSPAN-IRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT  257 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s--~~-ka~~~~G~g~~~-v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt  257 (499)
                           ++..+++.  ..++  +. +.++.+|+   + +..+..+...  .+|+++++.    . +      .|++++..|
T Consensus        82 -----~g~~vLv~--g~FG~r~~~eia~~~g~---~~v~~l~~~~g~--~~~~~~ve~----~-~------~v~~vhnET  138 (374)
T TIGR01365        82 -----RGVDVLAW--ESFGKGWVTDVTKQLKL---PDVRVLEAEYGK--LPDLKKVDF----K-N------DVVFTWNGT  138 (374)
T ss_pred             -----CCCeEEEE--CHHHHHHHHHHHHhcCC---CCcEEEcCCCCC--CCCHHHcCC----C-C------CEEEecCCC
Confidence                 33344443  2444  34 88888999   5 6777665543  789999973    1 1      267999999


Q ss_pred             cccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhh
Q 010842          258 STTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL  337 (499)
Q Consensus       258 ~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~  337 (499)
                      +||...|+++|+..+  ++..++||+.-+.+....+        +.++|.+..+++|.++.|.|.+++.++++..- +.-
T Consensus       139 STGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~--------~d~iDv~~tgsQK~L~~ppGls~v~vs~~Al~-~~~  207 (374)
T TIGR01365       139 TSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLD--------YHKLDVVTFSWQKVLGGEGAHGMLILSPRAVA-RLE  207 (374)
T ss_pred             chheecccccccccc--CCCcEEEEccchhcCCCCC--------hhHCcEEEEechhccCCCCceEEEEECHHHHH-HHh
Confidence            999999998776432  5899999986544433221        11399999999999999999999999987642 221


Q ss_pred             cCCccCCCCCC-CCCCCcccCCCcccCCCCCCC--cHHHHHHHHH---hcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010842          338 STDPEYLKNKP-SESNSVVDFKDWQVGTGRRFK--SLRLWMVLRS---YGVL-NLQSHIRSDIRLAKMFEGFVKSDPRFE  410 (499)
Q Consensus       338 ~~~~~yl~~~~-~~~~~~~~~~~~~~~~sr~~~--al~~~~~l~~---~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~  410 (499)
                      ... .|..... -+......+....-....++.  ...+++.+..   +..+ |++++.+|+.++++.+++.+++.+.++
T Consensus       208 ~~~-~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~  286 (374)
T TIGR01365       208 SYT-PAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIH  286 (374)
T ss_pred             hcC-CCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence            111 1221100 000000000000000112222  1233433333   3354 899999999999999999999984477


Q ss_pred             EEcC-C---CceEEEEEecCCCC--CCcchhHHHHHHHHHHHHhcCCEEEE-eeeECCEEEEEEeccCCCCcHHHHHHHH
Q 010842          411 IVVP-R---HFALVCFRLNPYPH--SGSADTEMLNRKLLDWVNSTGRVYLT-HTIVGGLYMLRFAVGASLTDERHVVAAW  483 (499)
Q Consensus       411 ~~~~-~---~~~~v~f~~~~~~~--~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~~g~~~lRi~~~~~~~t~~di~~l~  483 (499)
                      ++.. +   ...++++++.+.+.  .++.....+..++.+.|.++|..+-. .....+ ..|||..+ ...+.+||+.++
T Consensus       287 ~~~~~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~-~~fRIg~~-G~i~~~di~~l~  364 (374)
T TIGR01365       287 FLAETPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEKEGVAYDIGSYRDAP-SGLRIWCG-ATVEKSDLECLC  364 (374)
T ss_pred             cCCCChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHHCCEEEeccccccCC-CceEEecC-CcCCHHHHHHHH
Confidence            7752 1   23345566633210  00001122346788888888854332 222333 56999998 789999999999


Q ss_pred             HHHHHHHH
Q 010842          484 ELIMEGAD  491 (499)
Q Consensus       484 ~~l~~~~~  491 (499)
                      +.|.=+..
T Consensus       365 ~~l~~~~~  372 (374)
T TIGR01365       365 PWLDWAFA  372 (374)
T ss_pred             HHHHHHHh
Confidence            99876544

This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.

>PRK05839 hypothetical protein; Provisional

Probab=99.73  E-value=4.2e-15  Score=150.34  Aligned_cols=317  Identities=11%  Similarity=0.037  Sum_probs=191.4

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ..+.+.+....+. ...|....+..++.+++.+|+.+..|.+-+.     ...++|+|+++|+...+.+....       
T Consensus        40 ~~~~~a~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~-----~~I~it~G~~~al~~~~~~~~~~-------  106 (374)
T PRK05839         40 KFIQDALKNNAHL-LNKYPKSAGEESLREAQRGFFKRRFKIELKE-----NELIPTFGTREVLFNFPQFVLFD-------  106 (374)
T ss_pred             HHHHHHHHHHhhc-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCc-----ceEEEecCcHHHHHHHHHHHhcC-------
Confidence            4445555543332 3345555566789999999999988853211     14688999888876655543210       


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-  262 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-  262 (499)
                        .++..|+++.+++..+...++..|+   +++.||.++++.|.+|+++.+  + +.      +.+|+++.++||||.+ 
T Consensus       107 --~~gd~vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~~~--~-~~------~k~v~i~nP~NPTG~~~  172 (374)
T PRK05839        107 --KQNPTIAYPNPFYQIYEGAAIASRA---KVLLMPLTKENDFTPSLNEKE--L-QE------VDLVILNSPNNPTGRTL  172 (374)
T ss_pred             --CCCCEEEECCCCchhhHHHHHhcCC---EEEEeecccccCCcCCcchhh--h-cc------ccEEEEeCCCCCcCccc
Confidence              0456788899999999999999999   999999986555777766542  2 12      3367778999999999 


Q ss_pred             --CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhc-----CCCC--CceeEecccccccC-CCcceEEEEeCchh
Q 010842          263 --DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN-----GIER--VDSFSFSPHKWLLS-YLDCCCLWVKQPGL  332 (499)
Q Consensus       263 --d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~-----g~~~--aDsi~~~~hK~l~~-p~~~g~l~~r~~~~  332 (499)
                        +.+++|+++|+++|+|+++|.+|+.+.. .+.......     +...  --.++.+..|.++. ..-+|+++.. +..
T Consensus       173 s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~-~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~-~~~  250 (374)
T PRK05839        173 SLEELIEWVKLALKHDFILINDECYSEIYE-NTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD-ASI  250 (374)
T ss_pred             CHHHHHHHHHHHHHcCCEEEeccchhhccc-CCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC-HHH
Confidence              4567888889999999999999987532 111111111     0001  12556788997644 4668888764 332


Q ss_pred             HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010842          333 LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI  411 (499)
Q Consensus       333 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~  411 (499)
                      . +.+.....++...                 .   ..+...++...+ ..+.+++..++..++.+.+.+.|    ++. 
T Consensus       251 ~-~~~~~~~~~~~~~-----------------~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l----~~~-  304 (374)
T PRK05839        251 L-KKYKAYRTYLGCA-----------------S---PLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREIL----GIT-  304 (374)
T ss_pred             H-HHHHHHHhhcCCC-----------------C---ChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhc----CCC-
Confidence            2 2221111111100                 0   112222222222 23445555666666666666554    222 


Q ss_pred             EcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC----CEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842          412 VVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG----GLYMLRFAVGASLTDERHVVAAWELI  486 (499)
Q Consensus       412 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~----g~~~lRi~~~~~~~t~~di~~l~~~l  486 (499)
                       .++....+.+++.+            ..++.+++.+ .|..+..+..+.    +..++|++++   .+.++++..++.|
T Consensus       305 -~p~gg~fi~~~~~~------------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~---~~~~~~~~~l~~l  368 (374)
T PRK05839        305 -IPPATFYVWLPVDN------------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALV---YDTPKLEKALEII  368 (374)
T ss_pred             -CCCeeEEEEEeCCC------------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEec---CCHHHHHHHHHHH
Confidence             23344445555532            2456667764 675554433332    2478999995   3688999999999


Q ss_pred             HHHHH
Q 010842          487 MEGAD  491 (499)
Q Consensus       487 ~~~~~  491 (499)
                      .++.+
T Consensus       369 ~~~l~  373 (374)
T PRK05839        369 KTYLE  373 (374)
T ss_pred             HHHhh
Confidence            88753

>PRK09275 aspartate aminotransferase; Provisional

Probab=99.73  E-value=2.3e-15  Score=155.50  Aligned_cols=361  Identities=11%  Similarity=0.098  Sum_probs=206.1

Q ss_pred             ChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHH-HHcCC--CCccccCCCccEEEcCChHHHHHHHHHHHHHHH
Q 010842          101 STAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLA-TMLKL--PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRA  177 (499)
Q Consensus       101 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la-~l~g~--~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~  177 (499)
                      .+|..+-++......   ..|...++..++.+++.+++. +.++.  +..    +....++|+|+++|+..++.+.....
T Consensus       113 ~~~~~v~e~~~~~~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~----~~~~I~vT~Ga~~al~~~~~aL~~~~  185 (527)
T PRK09275        113 DADEFVYELVDGIIG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPK----GEFDLFAVEGGTAAMCYIFDSLKENG  185 (527)
T ss_pred             CCCHHHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCC----CcCeEEEeCCHHHHHHHHHHHHhhhh
Confidence            346666665555433   248888888888888887554 43332  111    00146899999999888877532111


Q ss_pred             HhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC
Q 010842          178 LDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT  257 (499)
Q Consensus       178 ~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt  257 (499)
                      .-      .++..|+++.+.+..+...+++.|.|. .++.++.+++++|++|+++|++++++.++      +|+++.|+|
T Consensus       186 ll------~pGD~Vlv~~P~y~~Y~~~~~l~g~~~-~~v~v~~~~~~~f~~d~~~l~~~~~~~tk------ai~l~nP~N  252 (527)
T PRK09275        186 LL------KAGDKIALMTPIFTPYLEIPELPRYDL-EVVHINADEENEWQYPDSELEKLRDPSIK------ALFLVNPSN  252 (527)
T ss_pred             cC------CCCCEEEEeCCChHHHHHHHHHcCCCe-EEEEeecCcccCCCCCHHHHHhhcCCCCC------EEEEeCCcC
Confidence            11      167789999999999999999987722 44555555555699999999998765443      788889999


Q ss_pred             cccccCC---hhHHHHHHHH--hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCch
Q 010842          258 STTAVDN---VEPLAEVANE--YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPG  331 (499)
Q Consensus       258 ~~G~id~---l~~I~~ia~~--~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~  331 (499)
                      |||.+-+   +++|+++|++  +++|+++|.+|+.+..   .+.........--.++.+..|.++.| .-.|++...+..
T Consensus       253 PTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~  329 (527)
T PRK09275        253 PPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD---DFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALHEDN  329 (527)
T ss_pred             CcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc---cccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcCchh
Confidence            9999955   7888889965  4999999999987542   22222221222235566789998755 557888776542


Q ss_pred             hHHHhhcCC---------ccC--CCCCCCCCCCcccCCCcc--------cCCCCCCCcHHHHH-----HHHHh--cHHHH
Q 010842          332 LLVKALSTD---------PEY--LKNKPSESNSVVDFKDWQ--------VGTGRRFKSLRLWM-----VLRSY--GVLNL  385 (499)
Q Consensus       332 ~l~~~~~~~---------~~y--l~~~~~~~~~~~~~~~~~--------~~~sr~~~al~~~~-----~l~~~--g~~g~  385 (499)
                      .+.+....-         ..|  +....    ....+.+.-        ...+-.......++     ....+  +.+..
T Consensus       330 v~~~~i~~l~~~~~~~~~~ry~~~~~~p----~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~  405 (527)
T PRK09275        330 VFDKLIAKLPEEKKKELDKRYSSLTTDP----EKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYK  405 (527)
T ss_pred             HHHHHHHhccHHHHHHHHhhhhhccCCc----chhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHH
Confidence            221111000         000  10000    000011000        00010111111221     22222  23445


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCeEEE-cCCCceEEEE-EecCCCC--CCcchh-----HHHHHHHHHHHHhc-CCEEEE
Q 010842          386 QSHIRSDIRLAKMFEGFVKSDPRFEIV-VPRHFALVCF-RLNPYPH--SGSADT-----EMLNRKLLDWVNST-GRVYLT  455 (499)
Q Consensus       386 ~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~v~f-~~~~~~~--~~~~~~-----~~~~~~l~~~l~~~-g~~~~~  455 (499)
                      ++..+...+..+.+.+.|    ++.+. .+|.....+| .+.....  .+.+-.     .....+++.+|.++ |++++.
T Consensus       406 ~~~~~~~~~Rr~~l~~~L----g~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~P  481 (527)
T PRK09275        406 KAMKDIIRRRYKALYEGL----GLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLP  481 (527)
T ss_pred             HHHHHHHHHHHHHHHHHc----CCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeC
Confidence            566666667777777776    22222 2455544444 2221100  000000     00134566666655 555555


Q ss_pred             eeeEC-CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          456 HTIVG-GLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       456 ~~~~~-g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      ++.++ +..++|+|++|  .+++++.++.+.|+++.++..
T Consensus       482 G~~Fg~~~~~vRis~a~--~~~~~~~~~~~rl~~~l~~y~  519 (527)
T PRK09275        482 GGGFGGPEWSVRVSLAN--LNEEDYAKIGKAIRKLLDEYY  519 (527)
T ss_pred             chhhCCCCCeEEEEEec--CCHHHHHHHHHHHHHHHHHHH
Confidence            55554 24679999964  578899999999998887654

>PRK14809 histidinol-phosphate aminotransferase; Provisional

Probab=99.72  E-value=9.3e-15  Score=147.00  Aligned_cols=286  Identities=13%  Similarity=0.067  Sum_probs=183.8

Q ss_pred             hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842          125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka  204 (499)
                      ++...+.++    +++.++.+.+       ..++|+|+++++..++.+..+           ++..|+++.+++..+...
T Consensus        65 ~~~~~lr~~----ia~~~~~~~~-------~I~it~G~~~al~~~~~~~~~-----------~gd~V~v~~P~y~~~~~~  122 (357)
T PRK14809         65 ASHADLTAA----LADRWDVSPE-------QVWLANGGDGALDYLARAMLD-----------PGDTVLVPDPGFAYYGMS  122 (357)
T ss_pred             CCHHHHHHH----HHHHhCCCcc-------eEEECCCHHHHHHHHHHHhcC-----------CCCEEEEeCCChHHHHHH
Confidence            444556555    5566677654       468999999988776665432           566788898888888888


Q ss_pred             HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh--CCEEEee
Q 010842          205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY--GIWVHVD  282 (499)
Q Consensus       205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~--~~~lhvD  282 (499)
                      +...|.   .++.+|++.+++|.+|.+++++.+. .      +.+|+++.++||||.+-+.+++.++++..  ++++++|
T Consensus       123 ~~~~g~---~~~~~~l~~~~~~~~~~~~~~~~~~-~------~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~D  192 (357)
T PRK14809        123 ARYHHG---EVREYPVSKADDFEQTADTVLDAYD-G------ERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVD  192 (357)
T ss_pred             HHHcCC---eEEEEecccCcCCCcCHHHHHHhhc-C------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEe
Confidence            888999   8999998754458888888877642 1      23677789999999998887777777654  7899999


Q ss_pred             ccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCc
Q 010842          283 AAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDW  360 (499)
Q Consensus       283 ~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~  360 (499)
                      .+|+.+.. .+.........++ -.+..++.|.++.| .-+|+++..++ .+ +.+.. ...+                 
T Consensus       193 e~y~~~~~-~~~~~~~~~~~~~-vi~~~SfSK~~~~~GlRiG~~~~~~~-~~-~~~~~~~~~~-----------------  251 (357)
T PRK14809        193 EAYGEFAE-RPSAVALVEERDD-VAVLRTFSKAYGLAGLRLGYAVVPEE-WA-DAYARVNTPF-----------------  251 (357)
T ss_pred             chhhhccC-CchhHHHHhhCCC-EEEEecchhHhcCcchhheeeecCHH-HH-HHHHHhCCCC-----------------
Confidence            99987542 1111111111111 13456789999754 66898887543 22 22221 1000                 


Q ss_pred             ccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHH
Q 010842          361 QVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLN  439 (499)
Q Consensus       361 ~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~  439 (499)
                            ....+..++++..+. .+.+++..+...+..+++.+.|...    .+ ++..+.+.+++..            .
T Consensus       252 ------~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~-~~~g~f~~~~~~~------------~  308 (357)
T PRK14809        252 ------AASELACRAGLAALDDDEHVERTVETARWAREYIREELDAP----TW-ESAGNFVLAEVGD------------A  308 (357)
T ss_pred             ------CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCc----cC-CCCCCEEEEECCC------------H
Confidence                  012344455555543 3445566666666667777777543    12 4455555555521            2


Q ss_pred             HHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          440 RKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       440 ~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      .++.+.+.++|..+..+..+....++|++++    +.+++++++++|+++.
T Consensus       309 ~~~~~~l~~~gv~v~~g~~f~~~~~iRls~~----~~~~~~~~l~~L~~~l  355 (357)
T PRK14809        309 SAVAEAAQERGVIVRDCTSFGLPECIRITCG----TREETERAVEVLNEVL  355 (357)
T ss_pred             HHHHHHHHHCCEEEEECccCCCCCeEEEecC----CHHHHHHHHHHHHHHh
Confidence            4566777777865555544544468999985    4689999999998764

>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional

Probab=99.72  E-value=7.9e-15  Score=149.48  Aligned_cols=295  Identities=15%  Similarity=0.140  Sum_probs=173.5

Q ss_pred             HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCC
Q 010842          132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVS  211 (499)
Q Consensus       132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g  211 (499)
                      .++.+.|+++.+.+.         .+++++||+||..|+..+|.......+....+..+|......|-+..-++.+.+-.
T Consensus        85 ~~l~~~l~~~~~~~~---------~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~  155 (396)
T PRK04073         85 GPWYEKVAKLTGKDM---------VLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEE  155 (396)
T ss_pred             HHHHHHHHhcCCCCe---------EEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCc
Confidence            334444777776543         38999999999999999986421110000002234444555677666665554421


Q ss_pred             C---------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCE
Q 010842          212 P---------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIW  278 (499)
Q Consensus       212 ~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~  278 (499)
                      .         ..+..+|.       -|+++|++.+.+++      .+|++..+.+++|.+-|    +++|.++|++||++
T Consensus       156 ~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~------~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~l  222 (396)
T PRK04073        156 EYKRGFGPMLPGIKKIPY-------GDLEALKAAITPNT------AAFLVEPIQGEAGINIPPEGFLKAARELCKEENVL  222 (396)
T ss_pred             ccccCCCCCCCCceEeCC-------CCHHHHHHhcccCe------EEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence            0         01222322       17889988886433      47888888899999855    89999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF  357 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  357 (499)
                      +++|++|.++......+.....++ ..|.+++  .|.++.+ ...|+++.+++  +.+.+....    ..          
T Consensus       223 li~DEv~~g~g~~g~~~~~~~~~~-~pdi~~~--sK~lg~gg~~ig~~~~~~~--i~~~~~~~~----~~----------  283 (396)
T PRK04073        223 FIADEIQTGLGRTGKLFACDWDNV-TPDMYIL--GKALGGGVFPISCVAANRD--ILGVFTPGS----HG----------  283 (396)
T ss_pred             EEEecchhCCCcCcHHHHhhhcCC-CCCEEEe--cccccCCCCcceEEEEcHH--HHhhhcCCC----CC----------
Confidence            999999987532111111011222 3677776  5988766 56788877542  222221100    00          


Q ss_pred             CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC--CCeEEEcCCCceEEEEEecCCCCCCcchh
Q 010842          358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD--PRFEIVVPRHFALVCFRLNPYPHSGSADT  435 (499)
Q Consensus       358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~v~f~~~~~~~~~~~~~  435 (499)
                      .  +. ++   ..+...+++..+..-.-....++..++.+++.+.|+++  +.+..+ ++...++.+.+...        
T Consensus       284 ~--t~-~~---~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l~~~~i~~~-~~~g~~~~~~~~~~--------  348 (396)
T PRK04073        284 S--TF-GG---NPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEIDNPMIKEV-RGRGLFIGVELNEP--------  348 (396)
T ss_pred             C--CC-CC---CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhcCCcccce-ecceEEEEEEecch--------
Confidence            0  00 11   23444444444311001234566677888999988876  222222 23334455554321        


Q ss_pred             HHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          436 EMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       436 ~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                         ...+.++|.++|.++ .+   .+..++|+++ +...|++||++++++|+++.
T Consensus       349 ---~~~~~~~l~~~Gv~~-~~---~~~~~iRi~p-~l~~t~e~i~~~~~~l~~~l  395 (396)
T PRK04073        349 ---ARPYCEALKEEGLLC-KE---THETVIRFAP-PLVITKEELDWAFEKIKAVL  395 (396)
T ss_pred             ---HHHHHHHHHHCCeEE-ec---CCCCEEEEEC-CcccCHHHHHHHHHHHHHHh
Confidence               356777788888553 32   1335799998 46789999999999998763

>PRK04311 selenocysteine synthase; Provisional

Probab=99.72  E-value=6.6e-15  Score=150.65  Aligned_cols=284  Identities=17%  Similarity=0.147  Sum_probs=174.2

Q ss_pred             HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh------HHHHHH
Q 010842          133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST------FAKVCK  206 (499)
Q Consensus       133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s------~~ka~~  206 (499)
                      .+.+.+++++|.+..         +++++|+.|+..++.+. .           ++..|++|+..|++      +...++
T Consensus       131 ~~e~~lA~l~Gae~a---------~vv~sgtaAl~l~l~~l-~-----------~GdeVIvs~~e~~~~ggs~~i~~~~~  189 (464)
T PRK04311        131 ALAALLCALTGAEDA---------LVVNNNAAAVLLALNAL-A-----------AGKEVIVSRGELVEIGGAFRIPDVMR  189 (464)
T ss_pred             HHHHHHHHHhCCCeE---------EEECCHHHHHHHHHHHh-C-----------CCCEEEEcchhhhhcCcchhhHHHHH
Confidence            455569999998654         88888998888777432 1           45678888876663      345567


Q ss_pred             HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc--cc--ccCChhHHHHHHHHhCCEEEee
Q 010842          207 LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS--TT--AVDNVEPLAEVANEYGIWVHVD  282 (499)
Q Consensus       207 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~--~G--~id~l~~I~~ia~~~~~~lhvD  282 (499)
                      ..|+   .+++|+++.    ..++++++++|+++++      +|+..+.+|+  +|  ..-|+++|+++||+||+++++|
T Consensus       190 ~~G~---~l~~v~~~~----~t~~~dle~aI~~~Tk------lV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD  256 (464)
T PRK04311        190 QAGA---RLVEVGTTN----RTHLRDYEQAINENTA------LLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYD  256 (464)
T ss_pred             HCCc---EEEEECCCC----CCCHHHHHHhcCccCe------EEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEE
Confidence            7888   899888642    4689999999987765      7778888775  44  5679999999999999999999


Q ss_pred             ccccchh----c---cCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842          283 AAYAGSA----C---ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV  355 (499)
Q Consensus       283 ~A~g~~~----~---~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  355 (499)
                      ++.|...    +   ..|......  -.++|.+++++|||+++| .+|+++.+++ .+ +.+...+              
T Consensus       257 ~gsG~l~~~~~~gl~~~p~~~~~l--~~GaDiv~fSg~K~LgGp-~~G~i~g~~~-li-~~l~~~~--------------  317 (464)
T PRK04311        257 LGSGSLVDLSQYGLPDEPTVQELL--AAGVDLVTFSGDKLLGGP-QAGIIVGKKE-LI-ARLKKHP--------------  317 (464)
T ss_pred             CCCcccccchhccCCCCCchhhHH--hcCCcEEEecCcccccCC-ceEEEEEcHH-HH-HHHhhch--------------
Confidence            8654321    0   011111111  025999999999999988 5888888653 22 2221110              


Q ss_pred             cCCCcccCCCCCCC-----cHHHHHHHHHh-----------cHHHHHHHHHHHHHHHHHHHHHHhcCC--C--eEEEcC-
Q 010842          356 DFKDWQVGTGRRFK-----SLRLWMVLRSY-----------GVLNLQSHIRSDIRLAKMFEGFVKSDP--R--FEIVVP-  414 (499)
Q Consensus       356 ~~~~~~~~~sr~~~-----al~~~~~l~~~-----------g~~g~~~~~~~~~~~a~~l~~~L~~~~--~--~~~~~~-  414 (499)
                              ..|.++     ...+..++..+           +..-+....++..++|+.+.+.|+..+  +  +++... 
T Consensus       318 --------~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~  389 (464)
T PRK04311        318 --------LKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSF  389 (464)
T ss_pred             --------hHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEcc
Confidence                    111111     11122222211           112244455777788899999998764  3  344421 


Q ss_pred             --------C--CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHH
Q 010842          415 --------R--HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWE  484 (499)
Q Consensus       415 --------~--~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~  484 (499)
                              |  .++.+++.+.+..        ....++.++|.+.-.-++. ..-+++.++=  +  ....++|++.+++
T Consensus       390 ~~~gggs~p~~~~~~~~v~~~~~~--------~~~~~l~~~lr~~~~~i~~-r~~~~~~~ld--~--r~~~~~~~~~~~~  456 (464)
T PRK04311        390 SQVGGGSLPVDRLPSAAVTLTPKD--------RSLEALAARLRLLPPPVIG-RIEDGRLLLD--L--RTLEEEDEERLAA  456 (464)
T ss_pred             CccCCCCCcCCCCCeEEEEEeCCC--------CCHHHHHHHHhcCCCCEEE-EEECCEEEEE--e--CcCCHHHHHHHHH
Confidence                    2  2344555554421        1135566666543332333 2334443332  2  2247889999999


Q ss_pred             HHHHHH
Q 010842          485 LIMEGA  490 (499)
Q Consensus       485 ~l~~~~  490 (499)
                      .|+++.
T Consensus       457 ~~~~~~  462 (464)
T PRK04311        457 ALLEAL  462 (464)
T ss_pred             HHHHHh
Confidence            998874

>PRK13237 tyrosine phenol-lyase; Provisional

Probab=99.72  E-value=2.1e-14  Score=143.75  Aligned_cols=323  Identities=13%  Similarity=0.074  Sum_probs=196.4

Q ss_pred             CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC
Q 010842          118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT  197 (499)
Q Consensus       118 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~  197 (499)
                      -..|..+|....||++    +++++|.+..         +.|++||.|+..+.....    +       ++.+|  +...
T Consensus        71 Dd~Yagd~s~~~LE~~----vAe~lG~e~a---------V~v~sGTaAl~ll~~l~v----~-------pGd~V--p~n~  124 (460)
T PRK13237         71 DEAYAGSRNFYHLEET----VQEYYGFKHV---------VPTHQGRGAENLLSRIAI----K-------PGQYV--PGNM  124 (460)
T ss_pred             chhhcCCCcHHHHHHH----HHHHHCCCeE---------EEeCCHHHHHHHHHHhCC----C-------CcCEE--CCcc
Confidence            3568889999999999    8889998864         999999999886432111    0       34443  7777


Q ss_pred             chhHHHH-HHHhCCCCCCeEEeeCC---------CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc-cc---C
Q 010842          198 HSTFAKV-CKLAGVSPANIRALPTS---------VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT-AV---D  263 (499)
Q Consensus       198 H~s~~ka-~~~~G~g~~~v~~v~~~---------~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G-~i---d  263 (499)
                      |+...++ +...|.   ..+-++.+         +. ++.||+++|+++|++...  ..+.+|.++..++..| ..   +
T Consensus       125 ~f~Tt~ahI~~~Ga---~fvDi~~d~a~~~~~~~p~-tgnlD~d~Le~~I~~~~~--~~~~lV~a~itvn~~GGqpvs~~  198 (460)
T PRK13237        125 YFTTTRYHQELNGG---IFVDIIIDEAHDAQSDHPF-KGNVDLDKLQALIDEVGA--ENIAYICLAVTVNLAGGQPVSMA  198 (460)
T ss_pred             chHhhHHHHHhCCc---EEEeeecccccccccCCCC-CCCcCHHHHHHHhccccC--CccCceEEEEecccCCCeeCCHH
Confidence            8877776 666666   44433211         22 479999999999985422  1223466666666664 33   5


Q ss_pred             ChhHHHHHHHHhCCEEEeeccccchhc-cC----ccchhhhc------CCCCCceeEecccccccCCCcceEEEEeCchh
Q 010842          264 NVEPLAEVANEYGIWVHVDAAYAGSAC-IC----PEFRHYLN------GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGL  332 (499)
Q Consensus       264 ~l~~I~~ia~~~~~~lhvD~A~g~~~~-~~----~~~~~~~~------g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~  332 (499)
                      ++++|.++|++||+++|.|||+..... +.    +.+...--      -...+|.+++|+||.+.+|. .|++.++|++.
T Consensus       199 ~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~-GG~i~t~D~eL  277 (460)
T PRK13237        199 NMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI-GGFLAMNDEEL  277 (460)
T ss_pred             hHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC-ceEEEECCHHH
Confidence            789999999999999999999865422 22    11221110      12359999999999999875 68888998876


Q ss_pred             HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHH-HHHHHHHHHHHHHHHHHhcCCCeEE
Q 010842          333 LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQ-SHIRSDIRLAKMFEGFVKSDPRFEI  411 (499)
Q Consensus       333 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~-~~~~~~~~~a~~l~~~L~~~~~~~~  411 (499)
                      ..+.-.....|-..           ..|+--.+|...+++  ..+.    ++.+ .++++..+.++||.+.|.+. |+.+
T Consensus       278 ~~~~r~~~~~~eG~-----------~tygg~~grd~~alA--vgl~----E~~~~~y~~~ri~~~~~l~~~L~~~-Gvpv  339 (460)
T PRK13237        278 FDEAKELVVVYEGM-----------PSYGGMAGRDMEAMA--IGIE----ESVQYEYIEHRVGQVRYLGEKLLAA-GVPI  339 (460)
T ss_pred             HHHHHHhccccCCC-----------cCCCChhhhHHHHHH--hHHH----hhchHHHHHHHHHHHHHHHHHHHHC-CCce
Confidence            65443332222111           011111123322222  1222    2222 77788889999999999986 8988


Q ss_pred             EcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEE-eeeE------CC------EEEEEEeccCCCCcHH
Q 010842          412 VVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLT-HTIV------GG------LYMLRFAVGASLTDER  477 (499)
Q Consensus       412 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~-~~~~------~g------~~~lRi~~~~~~~t~~  477 (499)
                      +.|+....|.+......+.-.. ...-.+.|...|. +.|+=-+- ++..      .+      -..+|+++---.-|.+
T Consensus       340 ~~p~ggH~v~vda~~~lph~~~-~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~  418 (460)
T PRK13237        340 VEPVGGHAVFLDARRFLPHLPQ-DQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYA  418 (460)
T ss_pred             ecCCCceEEEEEhHHhCCCCCc-ccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHH
Confidence            8766555454432210000000 0112344544443 33431111 1110      11      2579999843344899


Q ss_pred             HHHHHHHHHHHHHHH
Q 010842          478 HVVAAWELIMEGADR  492 (499)
Q Consensus       478 di~~l~~~l~~~~~~  492 (499)
                      ++|.+.++|..+.++
T Consensus       419 h~~~v~~~~~~~~~~  433 (460)
T PRK13237        419 HMDVVADSVIKLYKH  433 (460)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999988764

>PRK07505 hypothetical protein; Provisional

Probab=99.72  E-value=8.5e-15  Score=149.62  Aligned_cols=300  Identities=10%  Similarity=0.021  Sum_probs=174.2

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~  206 (499)
                      ..+...++.+.+++++|. ..         +++++|++|+..++..++.....     +.++.+|+.....|.|+.....
T Consensus        89 ~~~~~~~l~~~la~~~~~-~~---------~~~~sG~~a~~~ai~~~~~~~~~-----~~~~~vi~~~~~~H~s~~~~~~  153 (402)
T PRK07505         89 RSQILKDLEEALSELFGA-SV---------LTFTSCSAAHLGILPLLASGHLT-----GGVPPHMVFDKNAHASLNILKG  153 (402)
T ss_pred             hhHHHHHHHHHHHHHhCC-CE---------EEECChHHHHHHHHHHHHhcccC-----CCCCCEEEEchhhhHhHHhhhh
Confidence            355566677779999987 43         66778889999888766532111     1123456667788988753322


Q ss_pred             H--hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecc
Q 010842          207 L--AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAA  284 (499)
Q Consensus       207 ~--~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A  284 (499)
                      .  .+.   +++.+|.       .|+++|++++++++      .+++++.|.+++|.+.|+++|.++|++||+++++|++
T Consensus       154 ~~~~~~---~v~~~~~-------~d~~~l~~~~~~~~------~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa  217 (402)
T PRK07505        154 ICADET---EVETIDH-------NDLDALEDICKTNK------TVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDA  217 (402)
T ss_pred             hhhcCC---eEEEeCC-------CCHHHHHHHHhcCC------CEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECc
Confidence            2  233   6777764       38899998885432      3677888899999999999999999999999999999


Q ss_pred             ccchhc--cCccchhhhcCC--CCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCC
Q 010842          285 YAGSAC--ICPEFRHYLNGI--ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKD  359 (499)
Q Consensus       285 ~g~~~~--~~~~~~~~~~g~--~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~  359 (499)
                      |+...+  ....+.....+.  .....++.+.-|.++.+  .|++++.++... +.+.. ...|.+.             
T Consensus       218 ~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~-~~~~~~~~~~t~~-------------  281 (402)
T PRK07505        218 HGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS--GGVIMLGDAEQI-ELILRYAGPLAFS-------------  281 (402)
T ss_pred             ccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc--CeEEEeCCHHHH-HHHHHhCCCceeC-------------
Confidence            853211  111111111121  22345566888988755  366655454433 33321 1122111             


Q ss_pred             cccCCCCC-CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHH
Q 010842          360 WQVGTGRR-FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEML  438 (499)
Q Consensus       360 ~~~~~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~  438 (499)
                          .+.. .....+..++..+..+.+.+..++..++.+.+.+.+...     .....+.+..+....         ...
T Consensus       282 ----~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~g~~~~i~~~~~~~---------~~~  343 (402)
T PRK07505        282 ----QSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE-----QSGSFLPIRLIYIGD---------EDT  343 (402)
T ss_pred             ----CCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----CCCCCCCEEEEEeCC---------HHH
Confidence                1111 112223334443444445544444444444443332211     111222222222221         123


Q ss_pred             HHHHHHHHHhcCCEEEEeee---ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          439 NRKLLDWVNSTGRVYLTHTI---VGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       439 ~~~l~~~l~~~g~~~~~~~~---~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      ..++.++|.++|+++.....   ..+..++|+++. ...|++|+++++++|+++.++
T Consensus       344 ~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~-~~~t~eei~~~~~~l~~~l~~  399 (402)
T PRK07505        344 AIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFR-ASHTNDEIKRLCSLLKEILDE  399 (402)
T ss_pred             HHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecC-ccCCHHHHHHHHHHHHHHHHh
Confidence            56788888888975433211   123368999994 788999999999999988654

>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed

Probab=99.72  E-value=4.3e-15  Score=149.86  Aligned_cols=308  Identities=15%  Similarity=0.087  Sum_probs=187.7

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      ..+.+.+....+.  ..|....+..++.+.+.+|+.+..|.+ -+.     ...++|+|+++++..++.+..-.      
T Consensus        43 ~~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~-----~~I~it~G~~~~i~~~~~~l~~~------  109 (364)
T PRK07865         43 PVIQEALAAAADA--PGYPTTAGTPELREAIVGWLARRRGVTGLDP-----AAVLPVIGSKELVAWLPTLLGLG------  109 (364)
T ss_pred             HHHHHHHHHHHhh--CCCCCccCCHHHHHHHHHHHHHHcCCCCCCc-----ccEEEccChHHHHHHHHHHHcCC------
Confidence            3444545443332  256666677899999999999988764 221     24688999988876654443111      


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|+++.++|..+..+++.+|+   +++.++.         +++++.   .      .+.+|+++.++||||.+
T Consensus       110 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~---------~~~l~~---~------~~~~v~~~~p~NPtG~~  164 (364)
T PRK07865        110 ----PGDVVVIPELAYPTYEVGARLAGA---TVVRADS---------LTELGP---Q------RPALIWLNSPSNPTGRV  164 (364)
T ss_pred             ----CCCEEEECCCCcccHHHHHHhcCC---EEEecCC---------hhhCCc---c------cceEEEEcCCCCCCCcc
Confidence                567788999999999999999999   8777642         122221   1      23467777899999988


Q ss_pred             ---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhc---C-CCCCceeEecccccccCC-CcceEEEEeCchhHH
Q 010842          263 ---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN---G-IERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLV  334 (499)
Q Consensus       263 ---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~---g-~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~  334 (499)
                         +.+++|.++|+++|+++++|.+|+.+....+.......   + ...-..++.+..|.++.| ..+|+++. +++.. 
T Consensus       165 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~-~~~~~-  242 (364)
T PRK07865        165 LGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAG-DPALV-  242 (364)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEec-CHHHH-
Confidence               45788899999999999999999865331111110000   1 001236778899998655 45777654 33333 


Q ss_pred             HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                      +.+.....+...                    ....+...++...+. .+.+++..+...+.++.+.+.|++. ++.+. 
T Consensus       243 ~~~~~~~~~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-  300 (364)
T PRK07865        243 AELLEVRKHAGM--------------------MVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA-GFRVD-  300 (364)
T ss_pred             HHHHHHHHhcCC--------------------CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-
Confidence            222111000000                    001222233333332 2445566677777888888999886 67654 


Q ss_pred             CCCceEE-EEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          414 PRHFALV-CFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       414 ~~~~~~v-~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                      +|..+.+ .+.. +..          ...+.+.+.+.|+.+..+..+.  +..++|++++.   +++++++.++.|+
T Consensus       301 ~~~~~~~~~~~~-~~~----------~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~~~~~~~~~~l~  363 (364)
T PRK07865        301 HSEAGLYLWATR-GED----------CWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA---TDERIAAAVERLA  363 (364)
T ss_pred             CCCccEEEEEeC-CCC----------HHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC---CHHHHHHHHHHhh
Confidence            3444433 3333 211          2445667777886554443332  35689999962   5899999998874

>TIGR03539 DapC_actino succinyldiaminopimelate transaminase

Probab=99.72  E-value=6.1e-15  Score=148.26  Aligned_cols=306  Identities=15%  Similarity=0.058  Sum_probs=185.6

Q ss_pred             HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      .+.+.+.....  ...|....+..++.+++.+|+.+.+|.+ -..     ...++|+|+++++..++.+..-.       
T Consensus        38 ~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~-----~~I~it~G~~~~i~~~~~~l~~~-------  103 (357)
T TIGR03539        38 LIRAALAAAAD--APGYPQTWGTPELREAIVDWLERRRGVPGLDP-----TAVLPVIGTKELVAWLPTLLGLG-------  103 (357)
T ss_pred             HHHHHHHHHHh--hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCc-----CeEEEccChHHHHHHHHHHHcCC-------
Confidence            34444444332  2345556677899999999999987764 221     24688999999876655433111       


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD  263 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id  263 (499)
                         ++..|+++..+|..+...++.+|+   +++.++         |++.++.   +      .+.+|+++.++||||.+-
T Consensus       104 ---~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~---------~~~~l~~---~------~~~~v~~~~p~NPtG~~~  159 (357)
T TIGR03539       104 ---PGDTVVIPELAYPTYEVGALLAGA---TPVAAD---------DPTELDP---V------GPDLIWLNSPGNPTGRVL  159 (357)
T ss_pred             ---CCCEEEECCCCcHHHHHHHHhcCC---EEeccC---------ChhhcCc---c------CccEEEEeCCCCCcCccC
Confidence               567889999999999999999898   776663         1222221   1      234777888999999985


Q ss_pred             C---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhc-----CCCCCceeEecccccccCC-CcceEEEEeCchhHH
Q 010842          264 N---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN-----GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLV  334 (499)
Q Consensus       264 ~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~-----g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~  334 (499)
                      +   +++|.++|+++|+++++|.+|+.+..- +.....+.     +...-..+..+..|.++.| .-+|+++. +++...
T Consensus       160 ~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~-~~~~~~  237 (357)
T TIGR03539       160 SVDELRAIVAWARERGAVVASDECYLELGWE-GRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAG-DPALVA  237 (357)
T ss_pred             CHHHHHHHHHHHHHcCeEEEEecchhhhccC-CCCccceecccCCCccccEEEEeccccccCCCceeEEEEec-CHHHHH
Confidence            4   678999999999999999999754321 11111111     0001135667899998655 34677764 333322


Q ss_pred             HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                      +.......+.                     .....+...++...+. ...++...++..+.++++.+.|++. ++.+. 
T Consensus       238 ~~~~~~~~~~---------------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-g~~~~-  294 (357)
T TIGR03539       238 ELLTVRKHAG---------------------LMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA-GFRID-  294 (357)
T ss_pred             HHHHHHhhcc---------------------cCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCCCc-
Confidence            2111110000                     0011233333333332 2445556666677788888888875 66654 


Q ss_pred             CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE--CCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842          414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV--GGLYMLRFAVGASLTDERHVVAAWELI  486 (499)
Q Consensus       414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~g~~~lRi~~~~~~~t~~di~~l~~~l  486 (499)
                      +|..+.+.+...+..          ...+.++|.+.|+.+..+..+  .+..++|+++++   +++++++.++.|
T Consensus       295 ~p~~~~~~~~~~~~~----------~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~---~~~~i~~~~~~l  356 (357)
T TIGR03539       295 HSEAGLYLWATRGED----------AWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA---TDERIAAAVARL  356 (357)
T ss_pred             CCCccEEEEEECCCC----------HHHHHHHHHhCCEEECCccccCCCCCCeEEEEecC---CHHHHHHHHHhh
Confidence            455555554433321          345677777788654443322  235789999963   578899988765

This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).

>TIGR03246 arg_catab_astC succinylornithine transaminase family

Probab=99.71  E-value=1.5e-14  Score=147.32  Aligned_cols=300  Identities=12%  Similarity=0.083  Sum_probs=177.4

Q ss_pred             HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCCchhHHHHHHHhCC
Q 010842          132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHSTFAKVCKLAGV  210 (499)
Q Consensus       132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~H~s~~ka~~~~G~  210 (499)
                      .++.+.|+++++.+.         ..++++||+||..|+..+|.....+   .+. ++.+|......|-+..-+....|.
T Consensus        80 ~~la~~L~~~~~~~~---------~~f~~SGseA~e~Alk~ar~~~~~~---~~~~r~~ii~~~~~yHG~~~~~~~~~~~  147 (397)
T TIGR03246        80 LRLAKKLVDATFADK---------VFFCNSGAEANEAALKLARRYALDK---HGADKSEIVAFKNSFHGRTLFTVSVGGQ  147 (397)
T ss_pred             HHHHHHHHhhCCCCE---------EEEeCCcHHHHHHHHHHHHHHHHhc---CCCCCCEEEEECCCcCCccHHHHHhcCC
Confidence            334444777776543         3899999999999999998653211   011 234455566678776655554442


Q ss_pred             C---------CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc----CChhHHHHHHHHhCC
Q 010842          211 S---------PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----DNVEPLAEVANEYGI  277 (499)
Q Consensus       211 g---------~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d~l~~I~~ia~~~~~  277 (499)
                      .         ...+..+|.       -|+++|++.+.++      +.+|++.-..++.|.+    +.+++|.++|++||+
T Consensus       148 ~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~  214 (397)
T TIGR03246       148 PKYSQGFAPLPGGIKHAPY-------NDLAAAKALISDK------TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNA  214 (397)
T ss_pred             cccccCCCCCCCceEEeCC-------CCHHHHHHHhccC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence            0         012233332       2789999988643      3366666555555644    459999999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF  357 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  357 (499)
                      ++++|++|.|+.....-+.....++ ..|.+++  -|.++..+..|.++.+++  +.+.+....    ..          
T Consensus       215 llI~DEv~tG~Gr~G~~~a~~~~gv-~pDi~t~--~K~lggG~pigav~~~~~--i~~~~~~~~----~~----------  275 (397)
T TIGR03246       215 LLIFDEVQTGVGRTGELYAYMHYGV-TPDILTS--AKALGGGFPIGAMLTTTE--IAAHLKVGT----HG----------  275 (397)
T ss_pred             EEEEechhhcCCccccchhhhhcCC-CCCEEEe--ehhhhCCcceeEEEEcHH--HHHhccCCC----cC----------
Confidence            9999999866522111111112244 3787765  688865566888877653  323332110    00          


Q ss_pred             CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEEc--CCCceEEEEEecCCCCCCcch
Q 010842          358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR-FEIVV--PRHFALVCFRLNPYPHSGSAD  434 (499)
Q Consensus       358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~~--~~~~~~v~f~~~~~~~~~~~~  434 (499)
                        .+. .+.+.......+++..+.   -.++.++..++.+++.+.|+++.. +.++.  .....++.+.+.+.       
T Consensus       276 --~t~-~~~p~~~aaa~a~l~~~~---~~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~-------  342 (397)
T TIGR03246       276 --TTY-GGNPLACAVAGKVLDLVN---TPELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEA-------  342 (397)
T ss_pred             --CCC-CCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCc-------
Confidence              001 111212223334444432   245677788888888888876521 11221  12223344444321       


Q ss_pred             hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          435 TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       435 ~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .......+.+.|.++|.++...    +..++|+++. ...|++||++++++|.++..++
T Consensus       343 ~~~~~~~~~~~l~~~Gv~~~~~----g~~~lR~~p~-~~~t~~~i~~~~~~l~~~l~~~  396 (397)
T TIGR03246       343 YQGKAKQFVNAAAEEGVIALIA----GPNVVRFAPS-LVISDDDIDEGLARFERAIEQV  396 (397)
T ss_pred             hhhHHHHHHHHHHHCCeEEeec----CCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHh
Confidence            1234567888888999654332    3467999884 7789999999999999887654

Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.

>TIGR00474 selA seryl-tRNA(sec) selenium transferase

Probab=99.71  E-value=1.3e-14  Score=148.05  Aligned_cols=162  Identities=15%  Similarity=0.117  Sum_probs=116.3

Q ss_pred             HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch------hHHHHH
Q 010842          132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS------TFAKVC  205 (499)
Q Consensus       132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~------s~~ka~  205 (499)
                      ..+.+.+++++|.+..         +++++|+.|+..++.+. .           ++..|++++..|.      ++...+
T Consensus       125 ~~le~~lA~l~gae~a---------lvv~sg~aAi~l~l~~l-~-----------~GdeVIvs~~e~v~~ggs~~i~~~~  183 (454)
T TIGR00474       125 SHVEGLLCELTGAEDA---------LVVNNNAAAVLLALNTL-A-----------KGKEVIVSRGELVEIGGSFRIPDVM  183 (454)
T ss_pred             HHHHHHHHHHhCCCcE---------EEECCHHHHHHHHHHHh-C-----------CcCEEEECCChhhhhcchhhHHHHH
Confidence            4455669999998764         77888998887777432 1           4667888876652      355567


Q ss_pred             HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc--cc--ccCChhHHHHHHHHhCCEEEe
Q 010842          206 KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS--TT--AVDNVEPLAEVANEYGIWVHV  281 (499)
Q Consensus       206 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~--~G--~id~l~~I~~ia~~~~~~lhv  281 (499)
                      +..|+   .++.++++  +  ..|+++++++|.++++      +|+..+.+|+  .|  .+-|+++|+++||+||++++|
T Consensus       184 ~~~G~---~~~~v~~~--~--~~~l~dle~aI~~~T~------lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~viv  250 (454)
T TIGR00474       184 EQSGA---KLVEVGTT--N--RTHLKDYEDAITENTA------LLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVME  250 (454)
T ss_pred             HHcCC---EEEEeCCC--C--CCCHHHHHHhcCcCCE------EEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEE
Confidence            77888   89888764  2  4689999999987664      6777777776  46  478999999999999999999


Q ss_pred             eccccchhc-------cCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCc
Q 010842          282 DAAYAGSAC-------ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQP  330 (499)
Q Consensus       282 D~A~g~~~~-------~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~  330 (499)
                      |++.|...-       ..|......  -.++|.+++++|||+++|. +|+++.+++
T Consensus       251 D~~sG~l~~~~~~gl~~~p~~~~~~--~~GaDiv~fSg~K~LgGp~-~G~i~g~~~  303 (454)
T TIGR00474       251 DLGSGSLVDLSRYGLPDEPTVQEVI--AAGVDLVTFSGDKLLGGPQ-AGIIVGKKE  303 (454)
T ss_pred             ECCCcccccchhccCCCCcccccHh--HcCCCEEEecCccccCCCe-EEEEEECHH
Confidence            986443200       001101111  1249999999999999884 788888753

In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.

>PTZ00125 ornithine aminotransferase-like protein; Provisional

Probab=99.71  E-value=2e-14  Score=146.93  Aligned_cols=309  Identities=12%  Similarity=0.092  Sum_probs=177.1

Q ss_pred             HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc---CCeEEEcCCCCchhHHHHHH
Q 010842          130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM---HKLVVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~---~~~~i~~s~~~H~s~~ka~~  206 (499)
                      ....+.+.+++++|.+.         .+++++||+||..|+..++......   .|.   +..+|......|-+...++.
T Consensus        74 ~~~~~~~~l~~~~~~~~---------~~~~~SGs~A~e~al~~~~~~~~~~---~~~~~~~~~vl~~~~~~Hg~~~~~~~  141 (400)
T PTZ00125         74 VLGLAEKYITDLFGYDK---------VLPMNSGAEAGETALKFARKWGYEV---KGIPENQAKIIFCNGNFSGRTIGACS  141 (400)
T ss_pred             HHHHHHHHHHhCCCCCE---------EEEeCCcHHHHHHHHHHHHHHHHhc---cCCCCCCCeEEEECCCcCCccHHHHh
Confidence            33444555777777654         3899999999999999987542111   121   23455556666777666655


Q ss_pred             HhCCCCCCeEEeeCCCCC--CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEE
Q 010842          207 LAGVSPANIRALPTSVDA--NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVH  280 (499)
Q Consensus       207 ~~G~g~~~v~~v~~~~~~--~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lh  280 (499)
                      ..+-........|...+-  -...|+++|++.++.     ..+.+|++....+++|.+-|    +++|.++|++||++++
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli  216 (400)
T PTZ00125        142 ASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQD-----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLI  216 (400)
T ss_pred             hcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCC-----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence            543210000001110000  002389999998851     12456777777889999877    9999999999999999


Q ss_pred             eeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842          281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD  359 (499)
Q Consensus       281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  359 (499)
                      +|++|.++......+.....++ ..|.++++  |+++.++ .+|+++.+++  +.+.+....   ...            
T Consensus       217 ~Dev~~g~g~~G~~~~~~~~~~-~pd~~~~s--K~l~~g~~~ig~v~~~~~--~~~~~~~~~---~~~------------  276 (400)
T PTZ00125        217 VDEIQTGLGRTGKLLAHDHEGV-KPDIVLLG--KALSGGLYPISAVLANDD--VMLVIKPGE---HGS------------  276 (400)
T ss_pred             EeccccCCCccchhhHHHhcCC-CCCEEEEc--ccccCCCcCcEEEEEcHH--HHhhccCCC---CCC------------
Confidence            9999976422111111112233 36888775  9998765 7888887653  222222110   000            


Q ss_pred             cccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEEcCCCceEEEEEecCCCCCCcchh
Q 010842          360 WQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PRFEIVVPRHFALVCFRLNPYPHSGSADT  435 (499)
Q Consensus       360 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~~~~~~~~~~  435 (499)
                       +. .+.+........+++.+..+++   .++..++.+++.+.|++.    +.+..+ .+...++.+.+.+..       
T Consensus       277 -t~-~~~~~~~~aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~~~~v~~~~~~-------  343 (400)
T PTZ00125        277 -TY-GGNPLACAVAVEALEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPWVKEI-RGKGLLNAIVFDHSD-------  343 (400)
T ss_pred             -CC-CcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCCeEEE-ecccEEEEEEEccCc-------
Confidence             00 1111112222233444433333   344455666666666553    322222 233344455554311       


Q ss_pred             HHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          436 EMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       436 ~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ......+.++|.++|..+ .+.   +..++|++++ ...++++|++++++|.++.+++
T Consensus       344 ~~~~~~~~~~l~~~Gv~v-~~~---~~~~lRi~~~-~~~~~~~i~~~l~~l~~~l~~~  396 (400)
T PTZ00125        344 GVNAWDLCLKLKENGLLA-KPT---HDNIIRFAPP-LVITKEQLDQALEIIKKVLKSF  396 (400)
T ss_pred             chHHHHHHHHHHHCCeEE-eec---CCCEEEEECC-ccCCHHHHHHHHHHHHHHHHHH
Confidence            122456778888888543 332   3467999984 6689999999999999988776

>PRK09440 avtA valine--pyruvate transaminase; Provisional

Probab=99.71  E-value=1e-14  Score=149.80  Aligned_cols=342  Identities=12%  Similarity=0.067  Sum_probs=194.4

Q ss_pred             HHHHHHHHHHHcccC-----CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHH
Q 010842          103 AGFLGEMLCACFNSV-----GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRA  177 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~-----~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~  177 (499)
                      ...+.+.+...++..     ...|....+...+.+++.+|+.+..|.+-+.     ...++|+|+++|+..++.+..+..
T Consensus        47 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~-----~~I~it~Ga~~al~~~~~~l~~~~  121 (416)
T PRK09440         47 EDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISP-----QNIALTNGSQSAFFYLFNLFAGRR  121 (416)
T ss_pred             HHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----hhEEEccChHHHHHHHHHHHhccc
Confidence            455666666655432     1346555667899999999999887764221     146889999998877766543210


Q ss_pred             HhHhhhhccCCeEEEc-CCCCchhHHHHHHHhCCCC-CCeEEeeCCCCC-CCccCHHHHHHHHHHHHHcCCccEEEEEec
Q 010842          178 LDAVGAENMHKLVVYG-SDQTHSTFAKVCKLAGVSP-ANIRALPTSVDA-NFSLSPQLLRRAVEADVEAGLVPLFLCATV  254 (499)
Q Consensus       178 ~~~~~~~g~~~~~i~~-s~~~H~s~~ka~~~~G~g~-~~v~~v~~~~~~-~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~  254 (499)
                      .      ..++..|++ ..++++.+...+...|.-. ..+..++++.++ .|.+|+++|+  +..      .+.+++.+.
T Consensus       122 ~------~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~------~~~~i~l~~  187 (416)
T PRK09440        122 A------DGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDE------DTGAICVSR  187 (416)
T ss_pred             c------CCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCC------CceEEEEec
Confidence            0      013456777 5778877777665443200 023344544321 3689999997  222      234788889


Q ss_pred             CCCcccccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCch
Q 010842          255 GTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPG  331 (499)
Q Consensus       255 gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~  331 (499)
                      ++||||.+-+   +++|+++|++|++|+++|.+|+.... ...+.........--.+..++.|++....-+|+++.. +.
T Consensus       188 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~-~~~~~~~~~~~~~~vI~~~SfSK~~~pGlRiG~~i~~-~~  265 (416)
T PRK09440        188 PTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFP-GIIFSEATPLWNPNIILCMSLSKLGLPGVRCGIVIAD-EE  265 (416)
T ss_pred             CCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCC-CcchhhcCccccCCeEEEecccccCCCcceEEEEeCC-HH
Confidence            9999999955   78888999999999999999964211 0001111011111124557889975444668887653 33


Q ss_pred             hHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHH-----HHHHHHHHHHHHHHHHhcC
Q 010842          332 LLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQS-----HIRSDIRLAKMFEGFVKSD  406 (499)
Q Consensus       332 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~-----~~~~~~~~a~~l~~~L~~~  406 (499)
                      .+ +.+.....+..                    .....+...++...+....+.+     ..+...+..+.+.+.|++.
T Consensus       266 l~-~~~~~~~~~~~--------------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~  324 (416)
T PRK09440        266 II-EALSNMNGIIS--------------------LAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRY  324 (416)
T ss_pred             HH-HHHHHHHHHhc--------------------cCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            22 22221111100                    0012344455555543222222     2222334445555555542


Q ss_pred             -C--CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-C--------EEEEEEeccCCCC
Q 010842          407 -P--RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-G--------LYMLRFAVGASLT  474 (499)
Q Consensus       407 -~--~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g--------~~~lRi~~~~~~~  474 (499)
                       +  ++++..+.....+++.+.+..      .+  ..++.+.+.++|+.+..+..+. +        ..++|++++   .
T Consensus       325 l~~~~~~~~~p~gg~fiw~~~~~~~------~~--~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~---~  393 (416)
T PRK09440        325 LPDEPCLIHKPEGAIFLWLWFKDLP------IT--TEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYV---Q  393 (416)
T ss_pred             cccCCeEEecCCCceEEEEECCCCC------CC--HHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEec---C
Confidence             2  355443333455555554311      01  2456666777786555443331 1        248999996   2


Q ss_pred             cHHHHHHHHHHHHHHHHHHhccC
Q 010842          475 DERHVVAAWELIMEGADRLFKGS  497 (499)
Q Consensus       475 t~~di~~l~~~l~~~~~~l~~~~  497 (499)
                      +++++++++++|.++.++..+++
T Consensus       394 ~~~~l~~~i~~l~~~~~~~~~~~  416 (416)
T PRK09440        394 DDEEIEKGIAILAEEVEKAYAES  416 (416)
T ss_pred             CHHHHHHHHHHHHHHHHHHhhcC
Confidence            68999999999999988876653

>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]

Probab=99.71  E-value=3.5e-14  Score=146.49  Aligned_cols=334  Identities=14%  Similarity=0.071  Sum_probs=218.0

Q ss_pred             HHHHHHHHHHcc---cC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh
Q 010842          104 GFLGEMLCACFN---SV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD  179 (499)
Q Consensus       104 ~~~~~~l~~~~n---~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~  179 (499)
                      ..+.+.+...+.   .. ...|....+...+.+++.+++....|.....     ...++|+|+++|+...+.+..+    
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~-----~~IiiT~G~q~al~l~~~~l~~----  177 (459)
T COG1167         107 EALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEP-----EQIVITSGAQQALDLLLRLLLD----  177 (459)
T ss_pred             HHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCc-----CeEEEeCCHHHHHHHHHHHhCC----
Confidence            444555544442   22 3456666788999999999999888875432     2478999998887765555432    


Q ss_pred             HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc
Q 010842          180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST  259 (499)
Q Consensus       180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~  259 (499)
                             +++.|++.+++|+....+.+.+|+   +++.||+|++   .||+++|++.+....    .-++.+.....|||
T Consensus       178 -------pGd~v~vE~PtY~~~~~~~~~~g~---~~~~vp~d~~---G~~~e~le~~~~~~~----~k~~y~~P~~qNPt  240 (459)
T COG1167         178 -------PGDTVLVEDPTYPGALQALEALGA---RVIPVPVDED---GIDPEALEEALAQWK----PKAVYVTPTFQNPT  240 (459)
T ss_pred             -------CCCEEEEcCCCcHHHHHHHHHcCC---cEEecCCCCC---CCCHHHHHHHHhhcC----CcEEEECCCCCCCC
Confidence                   688999999999999999999999   9999999976   599999999987641    12345555567999


Q ss_pred             cccCCh---hHHHHHHHHhCCEEEeeccccchhccCccchhhhcCC--CCCceeEecccccccCCCcceEEEEeCchhHH
Q 010842          260 TAVDNV---EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI--ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLV  334 (499)
Q Consensus       260 G~id~l---~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~--~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~  334 (499)
                      |..-++   ++|.++|++|++|++.|..|+-+....+.... +..+  ..--....++.|.+.....+|++.....  +.
T Consensus       241 G~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~-l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~--~~  317 (459)
T COG1167         241 GVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPP-LKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPE--LI  317 (459)
T ss_pred             CCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCC-hHhhCCCCCEEEEeeehhhcccccceeeeeCCHH--HH
Confidence            999666   68999999999999999999876554322211 1111  1233567788999998888999987653  11


Q ss_pred             HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcC-CCeEE
Q 010842          335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--VLNLQSHIRSDIRLAKMFEGFVKSD-PRFEI  411 (499)
Q Consensus       335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~~  411 (499)
                      +.+.........                 .+..+....+..-+. -|  ...++++.+...+..+.+.+.|.+. |+...
T Consensus       318 ~~~~~~k~~~~~-----------------~~s~~~Q~~la~~l~-~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~  379 (459)
T COG1167         318 EKLLRLKQAADL-----------------GPSSLSQAALAAFLL-SGHYDRHLRRLRREYARRRDALLEALAEYLPELAT  379 (459)
T ss_pred             HHHHHHHHHhcC-----------------CCChHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCee
Confidence            222111111000                 000001111112222 23  3344555555566677788888776 32333


Q ss_pred             EcCCCce-EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEE-eeeEC----CEEEEEEeccCCCCcHHHHHHHHHH
Q 010842          412 VVPRHFA-LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLT-HTIVG----GLYMLRFAVGASLTDERHVVAAWEL  485 (499)
Q Consensus       412 ~~~~~~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~~----g~~~lRi~~~~~~~t~~di~~l~~~  485 (499)
                      +..|..+ .++.++++.-         ...++.++..++|..+.. +..+.    ...++|+++++  .+.++|++.++.
T Consensus       380 ~~~p~gG~flwl~l~~~~---------~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~--~~~e~i~~gi~~  448 (459)
T COG1167         380 WTRPEGGLFLWLELPEGI---------DARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSS--PSEEEIEEGIKR  448 (459)
T ss_pred             eecCCceEEEEEEcCCCC---------CHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCC--CCHHHHHHHHHH
Confidence            4445444 4445554421         156778888888887665 33332    24589999963  568999999999


Q ss_pred             HHHHHHHHhc
Q 010842          486 IMEGADRLFK  495 (499)
Q Consensus       486 l~~~~~~l~~  495 (499)
                      |.++..+...
T Consensus       449 l~~~~~~~~~  458 (459)
T COG1167         449 LAALLREAAA  458 (459)
T ss_pred             HHHHHHHHhc
Confidence            9988876643

>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase

Probab=99.70  E-value=8.3e-15  Score=151.26  Aligned_cols=358  Identities=12%  Similarity=0.120  Sum_probs=203.4

Q ss_pred             HHHHHHHHHHHcccCCcccccChh-hHHHHHHHHHHHHHHcCC---CCccccCCCccEEEcCChHHHHHHHHHHHH-HHH
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPA-STELEIVVMDWLATMLKL---PKTFMFSGTGGGVIQNTTSDSILVTLIAAR-DRA  177 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~-~~~lE~~~~~~la~l~g~---~~~~~~~~~~~g~~t~ggt~A~~~al~~ar-~~~  177 (499)
                      +..+-++.....+.   .|....+ ....|+.+.+++.+.++.   +.+.     -..++|+|+++|+..++.+.. +..
T Consensus       109 ~~~~~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~-----~~V~it~Gat~al~~~~~~l~~~~l  180 (521)
T TIGR03801       109 DAFLYEMCDGIIGD---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGE-----FDLFAVEGGTAAMCYIFDSLKANEL  180 (521)
T ss_pred             CHHHHHHHHHhhcC---CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCc-----CeEEEeCCHHHHHHHHHHHHhHhhc
Confidence            45555555554433   3543333 345555555677776543   2210     046899999999888776532 111


Q ss_pred             HhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCC-----CccCHHHHHHHHHHHHHcCCccEEEEE
Q 010842          178 LDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDAN-----FSLSPQLLRRAVEADVEAGLVPLFLCA  252 (499)
Q Consensus       178 ~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~-----~~~d~~~L~~~i~~~~~~g~~p~~vv~  252 (499)
                      ..       ++..|++..+++..+...+.+.|.|. .++.|++++.+.     |++|+++|+++++++++      +|++
T Consensus       181 l~-------pGD~Vlv~~P~y~~y~~~~~l~~~g~-~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~k------ai~l  246 (521)
T TIGR03801       181 LK-------KGDKIALMTPIFTPYLEIPELPRYDF-EVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIK------ALFV  246 (521)
T ss_pred             CC-------CCCEEEEeCCCcHHHHHHHHHhcCCc-EEEEeecccccccccccCCCCHHHHHHhcCCCCc------EEEE
Confidence            11       67789999999999999988875532 677777764333     89999999987755443      7788


Q ss_pred             ecCCCcccccCC---hhHHHHHHHHh--CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEE
Q 010842          253 TVGTTSTTAVDN---VEPLAEVANEY--GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLW  326 (499)
Q Consensus       253 t~gtt~~G~id~---l~~I~~ia~~~--~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~  326 (499)
                      +.|+||||.+-+   +++|+++|++|  ++|+++|.+|+.+..   .+.........--.++.+..|.++.| .-.|+++
T Consensus       247 ~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~  323 (521)
T TIGR03801       247 VNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIA  323 (521)
T ss_pred             eCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccchhhhCCCCEEEEEcchhhccCchhhhhhhh
Confidence            899999999955   78888899987  999999999986542   22222222221235667889998655 6688888


Q ss_pred             EeCchhHH-----------HhhcCCccCCCCCCCCCCCcccCCCcccCCCC--------CCCcHHHH-----HHHHHh--
Q 010842          327 VKQPGLLV-----------KALSTDPEYLKNKPSESNSVVDFKDWQVGTGR--------RFKSLRLW-----MVLRSY--  380 (499)
Q Consensus       327 ~r~~~~l~-----------~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr--------~~~al~~~-----~~l~~~--  380 (499)
                      ..+...+.           +.+...-..+....    ....|.+.-+.-+|        .......+     +....+  
T Consensus       324 ~~~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p----~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~  399 (521)
T TIGR03801       324 LHKDNIFDKLIAELPEEKKKELDKRYSSLTTEP----RKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDK  399 (521)
T ss_pred             cCchHHHHHHHHhccHHHHHHHhhhhccccCCh----hhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhcc
Confidence            76542211           11111111111100    00111111111010        00111111     122222  


Q ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cCCCceEEEE-EecCCCC--CCcchhH-----HHHHHHHHHHHhc-C
Q 010842          381 GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VPRHFALVCF-RLNPYPH--SGSADTE-----MLNRKLLDWVNST-G  450 (499)
Q Consensus       381 g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~v~f-~~~~~~~--~~~~~~~-----~~~~~l~~~l~~~-g  450 (499)
                      +....++..+...+..+.+.+.|    ++.+. .++.....+| .+.....  .+.+-.+     ....+++.+|.++ |
T Consensus       400 ~~~y~~~~~~~~~~R~~~l~~~L----g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~g  475 (521)
T TIGR03801       400 ENAYKAETKDICRRREKLLFRGL----GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETG  475 (521)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhc----CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCC
Confidence            23445556666667777777776    33322 2455444443 3321100  0000000     0124566666654 6


Q ss_pred             CEEEEeeeECC-EEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          451 RVYLTHTIVGG-LYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       451 ~~~~~~~~~~g-~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      .+++.+..++. ..++|+|++|  .+++++.++.+.|+++.++...
T Consensus       476 V~v~PG~~Fg~~~~~vRisla~--l~~~~~~~~~~rl~~~~~~~~~  519 (521)
T TIGR03801       476 IVLLPGGGFGGPEWSVRVSLAN--LNEYDYAEIGRAIRKILDEYYE  519 (521)
T ss_pred             EEEeCchhcCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHHHH
Confidence            55555555543 4579999964  5788999999999999877654

This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).

>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]

Probab=99.70  E-value=8.9e-15  Score=133.68  Aligned_cols=297  Identities=14%  Similarity=0.103  Sum_probs=202.1

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~  206 (499)
                      ++.+.+.+...++++-|-++.         ++.+++-.||.-++.+..+           ++..|+-.+..|.|+....+
T Consensus       110 tq~iHk~LE~kiAqfh~rED~---------ilypscfdANag~feail~-----------pedAvfSDeLNhASIIdGir  169 (417)
T KOG1359|consen  110 TQDIHKLLESKIAQFHGREDT---------ILYPSCFDANAGAFEAILT-----------PEDAVFSDELNHASIIDGIR  169 (417)
T ss_pred             chHHHHHHHHHHHHHhCCCce---------EEeccccccchHHHHHhcC-----------hhhhhhccccccchhhhhhH
Confidence            455666666669999887765         8889988888777776643           56678888889999988777


Q ss_pred             HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842          207 LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA  286 (499)
Q Consensus       207 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g  286 (499)
                      ++.-              ...+|+.+|+..+.+..+..  -.+|+....-+..|.+.|+++|.+++++||..+.+|.||+
T Consensus       170 Lckr--------------y~h~dv~~l~~~l~~a~k~r--~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHa  233 (417)
T KOG1359|consen  170 LCKR--------------YRHVDVFDLEHCLISACKMR--LKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHA  233 (417)
T ss_pred             HHhh--------------hccchhHHHHHHHHHhhhhe--EEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeeccc
Confidence            6642              23788999998887654322  2345555566899999999999999999999999999998


Q ss_pred             chhccCccchh---hhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhh-cCCccCCCCCCCCCCCcccCCCccc
Q 010842          287 GSACICPEFRH---YLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL-STDPEYLKNKPSESNSVVDFKDWQV  362 (499)
Q Consensus       287 ~~~~~~~~~~~---~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~  362 (499)
                      -+++- +.-+.   .+.-...+|.+.....|.++.. ..|+. .-.+ .+...+ +...+||+...-.            
T Consensus       234 Tgf~G-~tGrGt~E~~~vm~~vdiinsTLgKAlGga-~GGyt-tgp~-~li~llrqr~RpylFSnslp------------  297 (417)
T KOG1359|consen  234 TGFFG-ETGRGTAEEFGVMGDVDIINSTLGKALGGA-SGGYT-TGPK-PLISLLRQRSRPYLFSNSLP------------  297 (417)
T ss_pred             ceeec-CCCCChHHHhCCCCcceehhhhhhhhhcCC-CCCCc-cCCh-hHHHHHHhcCCceeecCCCC------------
Confidence            76542 22221   2222346899999999998743 12332 2222 233333 4456788765311            


Q ss_pred             CCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHH
Q 010842          363 GTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKL  442 (499)
Q Consensus       363 ~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l  442 (499)
                       -.--..+.+++..+..     -.+.+.+...+.+++++..+.. ||.+.... .++..+.+.+         .++..+.
T Consensus       298 -pavV~~a~ka~dllm~-----s~~~i~~~~a~~qrfr~~me~a-GftIsg~~-hPI~pv~lGd---------a~lA~~~  360 (417)
T KOG1359|consen  298 -PAVVGMAAKAYDLLMV-----SSKEIQSRQANTQRFREFMEAA-GFTISGAS-HPICPVMLGD---------ARLASKM  360 (417)
T ss_pred             -hhhhhhhHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHhc-CceecCCC-CCccceeccc---------HHHHHHH
Confidence             0000123344333322     2455667778888999988765 99987543 2344333332         3456777


Q ss_pred             HHHHHhcCCEEEE---eeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          443 LDWVNSTGRVYLT---HTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       443 ~~~l~~~g~~~~~---~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .+.|.+.|+.++.   |....|+..+|+.+. ...|++|||++++++.++.+.+
T Consensus       361 ad~lLk~Gi~Vigfs~PvVP~gkariRVqiS-AaHt~edid~~i~Af~~vgr~~  413 (417)
T KOG1359|consen  361 ADELLKRGIYVIGFSYPVVPKGKARIRVQIS-AAHTEEDIDRLIEAFSEVGRFL  413 (417)
T ss_pred             HHHHHhcCceEEeecCCcCCCCceEEEEEEe-hhcCHHHHHHHHHHHHHHHHhh
Confidence            8889999986654   445678889999984 8889999999999999987654

>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases

Probab=99.70  E-value=4e-17  Score=157.14  Aligned_cols=251  Identities=19%  Similarity=0.146  Sum_probs=159.9

Q ss_pred             ccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcC
Q 010842          115 NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGS  194 (499)
Q Consensus       115 n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s  194 (499)
                      |.....|...|.+.++|+.    ++++||.+..         +|+.+||+||..++.+...           +...|++.
T Consensus        19 ~~gd~~Yg~D~~~~~l~~~----i~~l~g~e~a---------~f~~sGT~An~~al~~~~~-----------~~~~vi~~   74 (290)
T PF01212_consen   19 NVGDDAYGEDPTTARLEER----IAELFGKEAA---------LFVPSGTMANQLALRAHLR-----------PGESVICA   74 (290)
T ss_dssp             TSB-CCTTSSHHHHHHHHH----HHHHHTSSEE---------EEESSHHHHHHHHHHHHHH-----------TTEEEEEE
T ss_pred             ccCCcccCCChhHHHHHHH----HHHHcCCCEE---------EEeCCCChHHHHHHHHHHh-----------cCCceecc
Confidence            3333468888888888888    8999999764         8999999999999988763           56678889


Q ss_pred             CCCchhHHHH---HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc-ccc---CChhH
Q 010842          195 DQTHSTFAKV---CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST-TAV---DNVEP  267 (499)
Q Consensus       195 ~~~H~s~~ka---~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~-G~i---d~l~~  267 (499)
                      ..+|..+.+.   ..+.|.   .++.|+.+.+|  .+|+++|++.+........+|.+|..+.+++.. |.+   +.|++
T Consensus        75 ~~aHi~~~E~ga~~~~~G~---~~~~l~~~~~G--~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~a  149 (290)
T PF01212_consen   75 DTAHIHFDETGAIEELSGA---KLIPLPSDDDG--KLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRA  149 (290)
T ss_dssp             TTEHHHHSSTTHHHHHTTC---EEEEEBECTGT--BB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHH
T ss_pred             ccceeeeeccchhhHhcCc---EEEECCCcccC--CCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHH
Confidence            8999876654   245788   89999876434  999999999998865433456667777766543 666   56788


Q ss_pred             HHHHHHHhCCEEEeeccccchhcc--CccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCC
Q 010842          268 LAEVANEYGIWVHVDAAYAGSACI--CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLK  345 (499)
Q Consensus       268 I~~ia~~~~~~lhvD~A~g~~~~~--~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~  345 (499)
                      |.++||+||+++|+|||--.....  ....+...   ..+|++++++.|.++.|. .+++..+ ++.+.+.+.. ..++.
T Consensus       150 i~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~---~~~D~v~~~~tK~~g~~~-Gavl~~~-~~~i~~~~~~-~k~~g  223 (290)
T PF01212_consen  150 ISELAREHGLPLHMDGARLANAAAALGVSLAEIA---AGADSVSFGGTKNGGAPG-GAVLAGN-KEFIAKARRQ-RKRLG  223 (290)
T ss_dssp             HHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH---TTSSEEEEETTSTT-SSS-EEEEEES-HHHHHHHHHH-HHHHT
T ss_pred             HHHHHHhCceEEEEehhhHHHhhhcccccHHHHh---hhCCEEEEEEEccccccc-ceEEEec-hHHHHHHHHH-HHHhc
Confidence            888999999999999984322221  11122333   359999999999999884 3444444 3322222211 11111


Q ss_pred             CCCCCCCCcccCCCcccCCCCCCCcHHH---HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce
Q 010842          346 NKPSESNSVVDFKDWQVGTGRRFKSLRL---WMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA  418 (499)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~  418 (499)
                      +.-                 |..+.+.+   +......+.+.....+.+..++++++.+.|+.++ +.+..++..+
T Consensus       224 g~~-----------------~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~~-~~~~~~~~tn  281 (290)
T PF01212_consen  224 GGM-----------------RQAGVLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEALG-GVLPRPVETN  281 (290)
T ss_dssp             HHH-----------------HHTTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEEC-EEEETTSS-H
T ss_pred             cCe-----------------eecceeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHCC-CcccCCCCCc
Confidence            100                 00011111   1111111223335677888899999999999984 5566555444

It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....

>PRK07392 threonine-phosphate decarboxylase; Validated

Probab=99.70  E-value=4.3e-14  Score=142.31  Aligned_cols=289  Identities=14%  Similarity=0.025  Sum_probs=179.9

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~  206 (499)
                      ...+.++    +++.++.+.+       ..++|+|+++++..++.+..            ++..|++..+++..+...++
T Consensus        59 ~~~Lr~a----ia~~~~v~~~-------~I~it~G~~~~i~~~~~~l~------------~g~~vlv~~P~y~~~~~~~~  115 (360)
T PRK07392         59 YRELRLA----LAQHHQLPPE-------WILPGNGAAELLTWAGRELA------------QLRAVYLITPAFGDYRRALR  115 (360)
T ss_pred             HHHHHHH----HHHHhCcChh-------hEEECCCHHHHHHHHHHHhC------------CCCeEEEECCCcHHHHHHHH
Confidence            3455555    5555577655       46889999888776655431            23468889999999999999


Q ss_pred             HhCCCCCCeEEeeCCCCCCC---ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeec
Q 010842          207 LAGVSPANIRALPTSVDANF---SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDA  283 (499)
Q Consensus       207 ~~G~g~~~v~~v~~~~~~~~---~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~  283 (499)
                      .+|+   +++.||.+.++.+   ..+++.+++..       ..+.+++.+.++||||.+-+.++|.++++++++ +++|.
T Consensus       116 ~~g~---~~~~v~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE  184 (360)
T PRK07392        116 AFGA---TVKELPLPLDQPSPGLTLRLQTLPPQL-------TPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDE  184 (360)
T ss_pred             HcCC---eEEEEecccccCCcccccCHHHHHHhc-------cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEEC
Confidence            9999   9999999865533   24555554432       123478888999999999999999999999985 77799


Q ss_pred             cccchhccCc--cchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCc
Q 010842          284 AYAGSACICP--EFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDW  360 (499)
Q Consensus       284 A~g~~~~~~~--~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~  360 (499)
                      +|..+.....  .........+ --.+..+..|.++.| .-+|+++..++ .+ +.+......                 
T Consensus       185 ~y~~~~~~~~~~s~~~~~~~~~-~vi~i~S~SK~~~l~GlRiG~~v~~~~-~~-~~~~~~~~~-----------------  244 (360)
T PRK07392        185 AFMDFLPPDAEQSLIPCLAEYP-NLIILRSLTKFYSLPGLRLGYAIAHPD-RL-QRWQQWRDP-----------------  244 (360)
T ss_pred             chhhhccCccccchHHHhhcCC-CEEEEEechhhhcCCchheeeeeCCHH-HH-HHHHhhCCC-----------------
Confidence            9987643211  1111111111 124566889999844 77899887542 23 222111000                 


Q ss_pred             ccCCCCCCCcHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHH
Q 010842          361 QVGTGRRFKSLRLWMVLRSYGVLN-LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLN  439 (499)
Q Consensus       361 ~~~~sr~~~al~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~  439 (499)
                           .....+..+++...+.... .+...+...+.++++.+.|++++++.+. ++..+.+.++... .          .
T Consensus       245 -----~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~fl~~~~~~-~----------~  307 (360)
T PRK07392        245 -----WPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPL-PSAANFLLVQSQG-S----------A  307 (360)
T ss_pred             -----CCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCCEEEEEcCC-C----------H
Confidence                 0012344555554543323 3334455666778888999988888765 3444444444432 1          3


Q ss_pred             HHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          440 RKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       440 ~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      .++.+++. +.|..+..+..+.  +..++|++++    +.++.+++.++|.++.
T Consensus       308 ~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~----~~~~~~~l~~al~~~~  357 (360)
T PRK07392        308 LQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVR----TEAENQRLLEALAAIL  357 (360)
T ss_pred             HHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence            45666654 4576555444443  3468999996    3455566666666543

>TIGR00707 argD acetylornithine and succinylornithine aminotransferases

Probab=99.70  E-value=2.5e-14  Score=145.16  Aligned_cols=299  Identities=13%  Similarity=0.078  Sum_probs=168.0

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC-chhHHHHHHH
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT-HSTFAKVCKL  207 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~-H~s~~ka~~~  207 (499)
                      ....++.+++++++|.+.         .++++||++|+..++.+++......    +.++..|+++..+ |.+...+ ..
T Consensus        69 ~~~~~l~~~la~~~g~~~---------~~~~~sg~~a~~~a~~~~~~~~~~~----~~~~~~vi~~~~~yh~~~~~~-~~  134 (379)
T TIGR00707        69 EPQEELAEKLVEHSGADR---------VFFCNSGAEANEAALKLARKYTGDK----GKEKKKIIAFENSFHGRTMGA-LS  134 (379)
T ss_pred             HHHHHHHHHHHhhCCCCE---------EEEeCCcHHHHHHHHHHHHHHhhcc----CCCCCeEEEECCCcCCccHHH-HH
Confidence            344555566889898763         3899999999999998776432100    1123445555544 4333333 22


Q ss_pred             hCCCC-CCeEEeeCCCCCCCc--cCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc----CChhHHHHHHHHhCCEEE
Q 010842          208 AGVSP-ANIRALPTSVDANFS--LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----DNVEPLAEVANEYGIWVH  280 (499)
Q Consensus       208 ~G~g~-~~v~~v~~~~~~~~~--~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d~l~~I~~ia~~~~~~lh  280 (499)
                      .+... ......++..+-.+.  .|+++|++.+.+++      .+|+.+..++++|..    +++++|.++|+++|++++
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i  208 (379)
T TIGR00707       135 ATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDET------AAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLI  208 (379)
T ss_pred             hcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCe------eEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence            22200 000112222211111  18999999886543      366667666666754    348999999999999999


Q ss_pred             eeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCc
Q 010842          281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDW  360 (499)
Q Consensus       281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~  360 (499)
                      +|++|.++............++ ..|.++  ..|.++.+...|+++.+. + +.+.+....    ..          ..+
T Consensus       209 ~De~~~~~~~~g~~~~~~~~~~-~~d~~t--~sK~~~~G~riG~~~~~~-~-~~~~~~~~~----~~----------~~~  269 (379)
T TIGR00707       209 FDEVQTGIGRTGKFFAYEHYGI-EPDIIT--LAKGLGGGVPIGATLAKE-E-VAEAFTPGD----HG----------STF  269 (379)
T ss_pred             EeccccCCCccchhhhHHhcCC-CCCEEE--EcccccCCcccEEEEEcH-H-HHhhhcCCC----CC----------CCC
Confidence            9999976422111010011122 246665  479998667788887753 2 222222110    00          000


Q ss_pred             ccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE--E-cCCCceEEEEEecCCCCCCcchhHH
Q 010842          361 QVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI--V-VPRHFALVCFRLNPYPHSGSADTEM  437 (499)
Q Consensus       361 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~--~-~~~~~~~v~f~~~~~~~~~~~~~~~  437 (499)
                         .+.......++.+++.+..   .++.++..++++++++.|++. +...  . .++..+++.+.+.+.          
T Consensus       270 ---~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~g~~~~~~~~~~----------  332 (379)
T TIGR00707       270 ---GGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEEL-GKNYPNKEVRGKGLMLGIELEAP----------  332 (379)
T ss_pred             ---CCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHH-HhhCCCCccccCceEEEEEecCc----------
Confidence               1111222334444454422   245566667777777777654 2211  1 112344556655331          


Q ss_pred             HHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          438 LNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       438 ~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                       ..++.++|.++|+.+...    +..++|+++. ...|++++++++++|+++
T Consensus       333 -~~~~~~~l~~~Gv~v~~~----~~~~lRi~~~-~~~t~~~i~~~~~~l~~~  378 (379)
T TIGR00707       333 -CKDIVKKALEKGLLVNCA----GPKVLRFLPP-LIITKEEIDEAVSALEEA  378 (379)
T ss_pred             -HHHHHHHHHHCCcEEeeC----CCCEEEEECC-CcCCHHHHHHHHHHHHHh
Confidence             356778888888654432    3367999983 667899999999999865

Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)

>PRK08637 hypothetical protein; Provisional

Probab=99.69  E-value=1.2e-14  Score=147.66  Aligned_cols=337  Identities=12%  Similarity=0.093  Sum_probs=194.0

Q ss_pred             hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcC-CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842          102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLK-LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA  180 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g-~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~  180 (499)
                      +-..+.+.+..........|....+...+.+++.+++.+..+ .....    ....++|+|+++++.+.+.+..+     
T Consensus        21 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~----~~~I~it~G~~~al~~~~~~l~~-----   91 (388)
T PRK08637         21 YLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKK----MSLPIVTNALTHGLSLVADLFVD-----   91 (388)
T ss_pred             hHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccc----cceeeEccchHHHHHHHHHHhcC-----
Confidence            334444444443233345566666777788777777766432 22110    01358999999988777665432     


Q ss_pred             hhhhccCCeEEEcCCCCchhHHHHH-HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc
Q 010842          181 VGAENMHKLVVYGSDQTHSTFAKVC-KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST  259 (499)
Q Consensus       181 ~~~~g~~~~~i~~s~~~H~s~~ka~-~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~  259 (499)
                            ++..|+++.+++..+...+ ...|.   +++.||+..+ ++.+|+++|+++++....  ....+++.+.++|||
T Consensus        92 ------~gd~Vlv~~P~y~~~~~~~~~~~g~---~vv~v~~~~~-~~~~d~~~l~~~~~~~~~--~~~~~~~~~~P~NPT  159 (388)
T PRK08637         92 ------QGDTVLLPDHNWGNYKLTFNTRRGA---EIVTYPIFDE-DGGFDTDALKEALQAAYN--KGKVIVILNFPNNPT  159 (388)
T ss_pred             ------CCCEEEEcCCCCccHHHHHHHhcCC---EEEEecccCC-CCcCCHHHHHHHHHhhcc--CCCEEEEEeCCCCCC
Confidence                  5677999999999988875 46798   9999998422 247899999998872111  122457777799999


Q ss_pred             ccc---CChhHHHHHHHH-----hCCEEEeeccccchhccCccchhh---hcCC-CCCceeE-ecccccccCC-CcceEE
Q 010842          260 TAV---DNVEPLAEVANE-----YGIWVHVDAAYAGSACICPEFRHY---LNGI-ERVDSFS-FSPHKWLLSY-LDCCCL  325 (499)
Q Consensus       260 G~i---d~l~~I~~ia~~-----~~~~lhvD~A~g~~~~~~~~~~~~---~~g~-~~aDsi~-~~~hK~l~~p-~~~g~l  325 (499)
                      |.+   +.+++|+++|++     |++++++|.+|..+.+........   +.+. ++.-++. .+..|.++.| .-+|++
T Consensus       160 G~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~  239 (388)
T PRK08637        160 GYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFI  239 (388)
T ss_pred             CCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEE
Confidence            998   456777777775     899999999998764322111111   1111 1222232 2788865544 668998


Q ss_pred             EEeC----chhHHHhhcCCc-cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHH----HHHHHHHHH
Q 010842          326 WVKQ----PGLLVKALSTDP-EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQS----HIRSDIRLA  396 (499)
Q Consensus       326 ~~r~----~~~l~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~----~~~~~~~~a  396 (499)
                      ++..    ...+.+.+.... .+....              ..   ....+...++...+....+.+    ......+..
T Consensus       240 ~~~~~~~~~~~l~~~~~~~~~~~~~~~--------------~~---~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~  302 (388)
T PRK08637        240 TFGTKAGSSQTVKEALEKKVKGLIRSN--------------IS---NGPHPSQSAVLRALNSPEFDKEKQEKFQILKERY  302 (388)
T ss_pred             EEccccCCcHHHHHHHHHHHHHHhhcc--------------cC---CCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence            8753    122222221100 000000              00   012234444444443333332    233344445


Q ss_pred             HHHHHHHhcC---CCeEEEcCCCceEE-EEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccC
Q 010842          397 KMFEGFVKSD---PRFEIVVPRHFALV-CFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGA  471 (499)
Q Consensus       397 ~~l~~~L~~~---~~~~~~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~  471 (499)
                      +.+.+.|++.   +++.+. +|..+.+ ++++.+          ....++.+++. ++|+.+..    .+..++|++++.
T Consensus       303 ~~~~~~l~~~~~~~~~~~~-~~~~g~~~~~~l~~----------~~~~~l~~~l~~~~gv~~~~----~~~~~iRi~~~~  367 (388)
T PRK08637        303 EKTKEVLYDGKYDDAWQAY-PFNSGYFMCLKLKG----------VDAEELRVHLLEKYGIGTIA----LNETDLRIAFSC  367 (388)
T ss_pred             HHHHHHHHhhCCCCCcccc-cccceEEEEecCCh----------HHHHHHHHHHhhhcceEEEe----ccCCceEEEeec
Confidence            5566666554   246554 3444433 334431          12456777775 45654432    245679999963


Q ss_pred             CCCcHHHHHHHHHHHHHHHHHH
Q 010842          472 SLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       472 ~~~t~~di~~l~~~l~~~~~~l  493 (499)
                        .+.++++..++.|.++.+.+
T Consensus       368 --~~~~~i~~~~~~l~~~~~~~  387 (388)
T PRK08637        368 --VEEEDIPELFDSIYKAIKDL  387 (388)
T ss_pred             --CCHHHHHHHHHHHHHHHHhc
Confidence              57899999999999887654

>PRK09257 aromatic amino acid aminotransferase; Provisional

Probab=99.69  E-value=2.7e-14  Score=145.64  Aligned_cols=320  Identities=15%  Similarity=0.087  Sum_probs=197.9

Q ss_pred             HHHHHHHHHHccc-CCcccccChhhHHHHHHHHHHHHHHcCC--CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842          104 GFLGEMLCACFNS-VGFNWLASPASTELEIVVMDWLATMLKL--PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA  180 (499)
Q Consensus       104 ~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~--~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~  180 (499)
                      ..+.+.+...... ....|....+..++.+++.+|+.+..+.  ..+.     -..++|+|+++|+..++.+....    
T Consensus        47 ~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~-----i~v~iT~Ga~~al~~~~~~l~~~----  117 (396)
T PRK09257         47 RAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAGR-----VATVQTPGGTGALRVGADFLKRA----  117 (396)
T ss_pred             HHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCe-----EEEEecCCccHHHHHHHHHHHHh----
Confidence            4566666666543 2335777778899999999988665432  2220     01378999999988877543210    


Q ss_pred             hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842          181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT  260 (499)
Q Consensus       181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G  260 (499)
                           .++..|+++++++..+..+++.+|+   +++.+|+...+++.+|+++|++.+....   ....+++.+.++||||
T Consensus       118 -----~pGd~Vlv~~P~y~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~~~~~~---~~~~~~i~~~p~NPTG  186 (396)
T PRK09257        118 -----FPDAKVWVSDPTWPNHRAIFEAAGL---EVKTYPYYDAATKGLDFDAMLADLSQAP---AGDVVLLHGCCHNPTG  186 (396)
T ss_pred             -----CCCCeEEECCCCcccHHHHHHHcCC---cEEEEeccccccCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCCC
Confidence                 1577899999999999999999999   9999998322247899999999886421   1124667788999999


Q ss_pred             cc---CChhHHHHHHHHhCCEEEeeccccchhccCc-cchhh--hcCCCCCceeEecccccccC-CCcceEEEE--eCch
Q 010842          261 AV---DNVEPLAEVANEYGIWVHVDAAYAGSACICP-EFRHY--LNGIERVDSFSFSPHKWLLS-YLDCCCLWV--KQPG  331 (499)
Q Consensus       261 ~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~-~~~~~--~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~--r~~~  331 (499)
                      .+   +.+++|+++|++|++|+++|.+|..+..... .....  +.+...--.++.+..|.++. ..-+|++++  .++.
T Consensus       187 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~  266 (396)
T PRK09257        187 ADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAE  266 (396)
T ss_pred             CCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHH
Confidence            99   5578889999999999999999987542111 11111  11111112556889999986 577899874  3333


Q ss_pred             hHHHh---hcC--CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--------HHHHHHHHHHHHHHHHH
Q 010842          332 LLVKA---LST--DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--------VLNLQSHIRSDIRLAKM  398 (499)
Q Consensus       332 ~l~~~---~~~--~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~~a~~  398 (499)
                      .+.+.   +..  ...+...                      ..+...++...+.        .+.+++..++..+.++.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~~----------------------~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~  324 (396)
T PRK09257        267 EADRVLSQLKATIRTNYSNP----------------------PAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQL  324 (396)
T ss_pred             HHHHHHHHHHHHhhhhcCCC----------------------cHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            22111   111  0111100                      1122222222221        13345566677778888


Q ss_pred             HHHHHhcCC---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHH-HhcCCEEEEeeeECCEEEEEEeccCCCC
Q 010842          399 FEGFVKSDP---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWV-NSTGRVYLTHTIVGGLYMLRFAVGASLT  474 (499)
Q Consensus       399 l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lRi~~~~~~~  474 (499)
                      +.+.|++..   ++.+. .|+.+.+.|--.+             .++.+++ .+.|+ ++.+.   +    |+++++  .
T Consensus       325 l~~~L~~~~~~~~~~~~-~p~gg~~~w~~l~-------------~~~~~~l~~~~~V-~~~p~---~----ri~~~~--~  380 (396)
T PRK09257        325 LVEALKAKGPSRDFDFI-ARQRGMFSYSGLT-------------PEQVDRLREEFGV-YAVGS---G----RINVAG--L  380 (396)
T ss_pred             HHHHHHhcCCCCCcccc-cccceEEEecCCC-------------HHHHHHHHHcCCE-EEcCC---C----eEEEee--C
Confidence            888888762   35443 4544444332111             1233444 44454 44331   2    999853  6


Q ss_pred             cHHHHHHHHHHHHHH
Q 010842          475 DERHVVAAWELIMEG  489 (499)
Q Consensus       475 t~~di~~l~~~l~~~  489 (499)
                      ++++|++++++|+++
T Consensus       381 ~~~~i~~~~~~i~~~  395 (396)
T PRK09257        381 NESNIDYVAEAIAAV  395 (396)
T ss_pred             CHHHHHHHHHHHHhh
Confidence            889999999999864

>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal)

Probab=99.68  E-value=5.9e-15  Score=147.63  Aligned_cols=288  Identities=20%  Similarity=0.238  Sum_probs=189.8

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF  201 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~  201 (499)
                      ...|....+|+.    ++++-|...         .+++++|..|+..++.+...           ++..|+++...+...
T Consensus        52 ~gnPt~~~le~~----la~Le~g~~---------a~~~~SGmaAi~~~l~~ll~-----------~Gd~iv~~~~~Y~~t  107 (386)
T PF01053_consen   52 YGNPTVRALEQR----LAALEGGED---------ALLFSSGMAAISAALLALLK-----------PGDHIVASDDLYGGT  107 (386)
T ss_dssp             TC-HHHHHHHHH----HHHHHT-SE---------EEEESSHHHHHHHHHHHHS------------TTBEEEEESSSSHHH
T ss_pred             cccccHHHHHHH----HHHhhcccc---------eeeccchHHHHHHHHHhhcc-----------cCCceEecCCccCcc
Confidence            456777888887    888887644         48889998888777776543           466788888877665


Q ss_pred             HHHHH----HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC-
Q 010842          202 AKVCK----LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG-  276 (499)
Q Consensus       202 ~ka~~----~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~-  276 (499)
                      .+.++    ..|+   ++.+++.       -|+++|+++++++++      +|.+-.++||+..+-||++|+++||++| 
T Consensus       108 ~~~~~~~l~~~gv---~v~~~d~-------~d~~~l~~~l~~~t~------~v~~EspsNP~l~v~Dl~~i~~~a~~~g~  171 (386)
T PF01053_consen  108 YRLLEELLPRFGV---EVTFVDP-------TDLEALEAALRPNTK------LVFLESPSNPTLEVPDLEAIAKLAKEHGD  171 (386)
T ss_dssp             HHHHHHCHHHTTS---EEEEEST-------TSHHHHHHHHCTTEE------EEEEESSBTTTTB---HHHHHHHHHHTTT
T ss_pred             hhhhhhhhcccCc---EEEEeCc-------hhHHHHHhhccccce------EEEEEcCCCcccccccHHHHHHHHHHhCC
Confidence            55444    4688   8877753       389999999988654      8999999999999999999999999999 


Q ss_pred             CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842          277 IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV  354 (499)
Q Consensus       277 ~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  354 (499)
                      ++++||..++.....-|    +-.   +||.+..|..|++++..+  +|++.+++...+...+......           
T Consensus       172 ~~~vVDnT~atp~~~~p----L~~---GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~-----------  233 (386)
T PF01053_consen  172 ILVVVDNTFATPYNQNP----LEL---GADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRL-----------  233 (386)
T ss_dssp             -EEEEECTTTHTTTC-G----GGG---T-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHH-----------
T ss_pred             ceEEeeccccceeeecc----CcC---CceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhh-----------
Confidence            99999999988744322    222   399999999999986543  6777777633332222111111           


Q ss_pred             ccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cC-----C-----------Cc
Q 010842          355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VP-----R-----------HF  417 (499)
Q Consensus       355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~-----~-----------~~  417 (499)
                               .|-...+..+|..++  |.+.+..++++..++|..+.+.|+++|.++-+ .|     |           ..
T Consensus       234 ---------~G~~~~p~da~ll~r--gl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~g  302 (386)
T PF01053_consen  234 ---------LGATLSPFDAWLLLR--GLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGG  302 (386)
T ss_dssp             ---------HT-B--HHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCT
T ss_pred             ---------cCccchHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccC
Confidence                     111223566776666  55889999999999999999999999998743 33     1           24


Q ss_pred             eEEEEEecCCCCCCcchhHHHHHHHHHHHHhc--C----C---EEEEeee-----E-------CC--EEEEEEeccCCCC
Q 010842          418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNST--G----R---VYLTHTI-----V-------GG--LYMLRFAVGASLT  474 (499)
Q Consensus       418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~--g----~---~~~~~~~-----~-------~g--~~~lRi~~~~~~~  474 (499)
                      ++++|.+...        .+..+++.+.|.--  |    .   .+..+..     +       .|  ...+|+|++    
T Consensus       303 gl~sf~l~~~--------~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvG----  370 (386)
T PF01053_consen  303 GLLSFELKGG--------EEAARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVG----  370 (386)
T ss_dssp             SEEEEEESSH--------HHHHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE------
T ss_pred             ceeEEEeccc--------hhhhHhHHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEec----
Confidence            6888988762        23456666666311  1    0   1111110     0       01  257999996    


Q ss_pred             cHHHHHHHHHHHHHHHH
Q 010842          475 DERHVVAAWELIMEGAD  491 (499)
Q Consensus       475 t~~di~~l~~~l~~~~~  491 (499)
                       -||++.+++.|+++.+
T Consensus       371 -lEd~~dLi~Dl~~AL~  386 (386)
T PF01053_consen  371 -LEDPDDLIADLEQALE  386 (386)
T ss_dssp             -SS-HHHHHHHHHHHHH
T ss_pred             -cCCHHHHHHHHHHhcC
Confidence             3678888888877653

Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....

>PRK03967 histidinol-phosphate aminotransferase; Provisional

Probab=99.68  E-value=7.5e-14  Score=139.13  Aligned_cols=278  Identities=13%  Similarity=0.088  Sum_probs=176.2

Q ss_pred             hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842          125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka  204 (499)
                      ++...++++    +++.+|.+.+       ..++|+|+++++...+.+.             ++..|+++.+.|..+..+
T Consensus        55 ~g~~~lr~~----ia~~~~~~~~-------~I~~t~G~~~~l~~~~~~~-------------~gd~V~v~~P~y~~~~~~  110 (337)
T PRK03967         55 ITSDPLREA----IAEFYGLDAE-------NIAVGNGSDELISYLVKLF-------------EGKHIVITPPTFGMYSFY  110 (337)
T ss_pred             CCHHHHHHH----HHHHhCcCcc-------eEEEcCCHHHHHHHHHHHh-------------CCCeEEEeCCChHHHHHH
Confidence            455566665    6666677654       4688999998875443322             345688888899888888


Q ss_pred             HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecc
Q 010842          205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAA  284 (499)
Q Consensus       205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A  284 (499)
                      ++..|+   +++.|+.+.  +|.+|+++|++.+. ++      .+++.+.++||||.+-+.++|.++++ +++++++|++
T Consensus       111 ~~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~-~~------~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~  177 (337)
T PRK03967        111 AKLNGI---PVIDVPLKE--DFTIDGERIAEKAK-NA------SAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEA  177 (337)
T ss_pred             HHHcCC---eEEEeecCC--CCCcCHHHHHHhcc-CC------CEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECc
Confidence            899999   999999874  36899999987642 22      25667899999999999999999995 7999999999


Q ss_pred             ccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842          285 YAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVG  363 (499)
Q Consensus       285 ~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~  363 (499)
                      |+.+.  ...........++ -.++.++.|.++.| .-+|+++..+ ... +.+.......                   
T Consensus       178 y~~~~--~~~~~~~~~~~~~-vi~l~S~SK~~~l~GlRiG~iv~~~-~~i-~~~~~~~~~~-------------------  233 (337)
T PRK03967        178 YAEFS--GKSLIGLIDEYPN-LILLRTFSKAFGLAGIRAGYAIANE-EII-DALYRIKPPF-------------------  233 (337)
T ss_pred             hhhhc--ccchHHHHhhCCC-EEEEecchHhhcchhhhheeeecCH-HHH-HHHHhhcCCC-------------------
Confidence            97653  1111111111111 24567899999855 6688888743 322 2222111000                   


Q ss_pred             CCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHH
Q 010842          364 TGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKL  442 (499)
Q Consensus       364 ~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l  442 (499)
                         ....+...++...+. .+.+.+..++..+.++.+.+.|.+.     ..++..+.+++.+                .+
T Consensus       234 ---~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~~~~~~~~----------------~~  289 (337)
T PRK03967        234 ---SLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY-----AYPSDANFLLLKL----------------DA  289 (337)
T ss_pred             ---CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC-----cCCCCCcEEEEhH----------------HH
Confidence               012334444443332 3445555566666677777777654     1234444343322                14


Q ss_pred             HHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          443 LDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       443 ~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      .+.|.++|..+ .+.......++|++++    +.++.++++++|+++.+.
T Consensus       290 ~~~l~~~gi~v-~~~~~~~~~~~Ri~~~----~~~~~~~l~~~l~~~~~~  334 (337)
T PRK03967        290 YDYLLENGIVV-RKLSGRLEGHIRVTVG----KREENDEFIKALKEIKEG  334 (337)
T ss_pred             HHHHHHCCEEE-EeCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHHh
Confidence            56777778544 3322223468999986    567888888888876553

>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]

Probab=99.68  E-value=2.4e-14  Score=136.85  Aligned_cols=324  Identities=14%  Similarity=0.062  Sum_probs=217.4

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ...+...+.+++.+.|.+.-|-+..+..   ...++++|+|.||-+.+.+..+           |+...+++.+.+..+.
T Consensus       119 dy~Gl~~frqa~A~Fm~~~r~~~v~fdP---~~~Vv~~G~T~ane~l~fcLad-----------pgdafLvPtPyY~gfd  184 (471)
T KOG0256|consen  119 DYHGLPSFRQAVAEFMERARGNRVKFDP---ERVVVTNGATSANETLMFCLAD-----------PGDAFLVPTPYYPGFD  184 (471)
T ss_pred             cccCchHHHHHHHHHHHHHhCCCCccCc---cceEEecccchhhHHHHHHhcC-----------CCceeeecCCCCCccc
Confidence            3456778899988888888776433211   1468999999988766665533           7888899988888887


Q ss_pred             HHHH-HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC---ChhHHHHHHHHhCCE
Q 010842          203 KVCK-LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD---NVEPLAEVANEYGIW  278 (499)
Q Consensus       203 ka~~-~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id---~l~~I~~ia~~~~~~  278 (499)
                      .-++ ..|+   +++.|.+...++|++++++||+++.+.++.+.+.-.|+++.|+||.|.+-   .|..+..+|.++++.
T Consensus       185 rdl~~rTgv---eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniH  261 (471)
T KOG0256|consen  185 RDLRWRTGV---EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIH  261 (471)
T ss_pred             ccceeccCc---eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceE
Confidence            7665 4688   99999998777799999999999999999999999999999999999994   466777778999999


Q ss_pred             EEeeccccchhccCccchhhhcC---CC-CCc--eeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCC
Q 010842          279 VHVDAAYAGSACICPEFRHYLNG---IE-RVD--SFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSES  351 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g---~~-~aD--si~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~  351 (499)
                      +++|..|++..+..+++...+.-   .+ .-|  -|.++..|-++.| .-.|+++..++.....+-....-++.      
T Consensus       262 vI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~v------  335 (471)
T KOG0256|consen  262 VISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLV------  335 (471)
T ss_pred             EEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccCC------
Confidence            99999999988766665543221   11 223  4678889999988 55899998887654332222111111      


Q ss_pred             CCcccCCCcccCCCCCCCcHHHHHHHHHhc-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecC
Q 010842          352 NSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-----VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP  426 (499)
Q Consensus       352 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~  426 (499)
                                       .....++....+.     .+-+++.-+|....-+++.+.|+++ |+..+ +...+++||.--.
T Consensus       336 -----------------Ss~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl-~s~AGlF~wvDlr  396 (471)
T KOG0256|consen  336 -----------------SSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCL-KSNAGLFCWVDLR  396 (471)
T ss_pred             -----------------cHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCcee-ecCCeeEEEEEhH
Confidence                             1222233333332     2334444455555667888888887 77766 4566777764211


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhcCCEEEEeee---ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI---VGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       427 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      .- .+... -+--..|.+++...-++.++|+.   ....+|+|+|+.|  +.++.++-.+++|+.+...
T Consensus       397 ~l-L~s~t-fe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn--~~~~t~~~am~Ri~~~~~~  461 (471)
T KOG0256|consen  397 KL-LTSLT-FEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFAN--MSEETLEVAMRRLKQFLDS  461 (471)
T ss_pred             Hh-cCcCC-hHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEecc--CCHHHHHHHHHHHHHHHHh
Confidence            10 01000 01112344555554233445433   3456899999964  5666677788888888764

>PRK14808 histidinol-phosphate aminotransferase; Provisional

Probab=99.67  E-value=5.8e-14  Score=139.70  Aligned_cols=277  Identities=13%  Similarity=0.078  Sum_probs=180.4

Q ss_pred             hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842          125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka  204 (499)
                      +...++.+++.+|+.+.. .+++       ..++|+|+++++..++.+. +              .|++..++|..+..+
T Consensus        56 ~~~~~Lr~aia~~~~~~~-~~~~-------~i~it~Ga~~~i~~~~~~~-d--------------~v~v~~P~y~~~~~~  112 (335)
T PRK14808         56 SPDEELIEKILSYLDTDF-LSKN-------NVSVGNGADEIIYVMMLMF-D--------------RSVFFPPTYSCYRIF  112 (335)
T ss_pred             CChHHHHHHHHHHhCCCC-CCcc-------eEEEcCCHHHHHHHHHHHh-C--------------cEEECCCCHHHHHHH
Confidence            456677777555554432 5443       4689999999888777644 1              267788999999999


Q ss_pred             HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecc
Q 010842          205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAA  284 (499)
Q Consensus       205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A  284 (499)
                      ++.+|+   +++.+|.+++  +.++...    +.       ...+|+.+.++||||.+-+.+++.+++ ++++|+++|.+
T Consensus       113 ~~~~g~---~~~~v~~~~~--~~~~~~~----~~-------~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~  175 (335)
T PRK14808        113 AKAVGA---KFLEVPLTKD--LRIPEVN----VG-------EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEA  175 (335)
T ss_pred             HHHcCC---eEEEecCCCc--CCCChhH----cc-------CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECc
Confidence            999999   9999998754  4555332    11       123788899999999999999999998 58999999999


Q ss_pred             ccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842          285 YAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVG  363 (499)
Q Consensus       285 ~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~  363 (499)
                      |..+.  ...........+ --.++.+..|.++.| .-+|+++... +.. +.+...... ..                 
T Consensus       176 Y~~f~--~~~~~~~~~~~~-~vi~~~S~SK~~~l~GlRvG~~v~~~-~~~-~~l~~~~~~-~~-----------------  232 (335)
T PRK14808        176 YYEFH--GESYVDLLKKYE-NLAVIRTFSKAFSLAAQRIGYVVSSE-KFI-DAYNRVRLP-FN-----------------  232 (335)
T ss_pred             hhhhc--CCchHHHHHhCC-CEEEEEechhhccCcccceEEEEeCH-HHH-HHHHHhcCC-CC-----------------
Confidence            97652  111112222221 124567789999854 6688888754 322 333211100 00                 


Q ss_pred             CCCCCCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHH
Q 010842          364 TGRRFKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKL  442 (499)
Q Consensus       364 ~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l  442 (499)
                          ...+..+++...+ ..+.+.+..+...+.++++.+.|++. ++++. ++..+.+.+++....          ..++
T Consensus       233 ----~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~g~f~~~~l~~~~----------~~~~  296 (335)
T PRK14808        233 ----VSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYRIT-DSRGNFVFIFMEKEE----------KERL  296 (335)
T ss_pred             ----CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEC-CCCCeEEEEeCCCcc----------HHHH
Confidence                0122223332222 22345666667677778888999887 67765 556677766664321          2567


Q ss_pred             HHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          443 LDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       443 ~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      .++|.++|+.+. .  +.  .++|++++    +.++.++++++|+++
T Consensus       297 ~~~l~~~Gi~V~-~--~~--~~~Risi~----~~~~~~~~~~~l~~~  334 (335)
T PRK14808        297 LEHLRAKNIAVR-S--FR--EGVRITIG----KREENDMILKELEVF  334 (335)
T ss_pred             HHHHHHCCeEEE-E--CC--CCeEEecC----CHHHHHHHHHHHHhh
Confidence            788888886543 2  22  46999986    578899999998753

>TIGR01885 Orn_aminotrans ornithine aminotransferase

Probab=99.67  E-value=3.3e-13  Score=137.90  Aligned_cols=301  Identities=12%  Similarity=0.099  Sum_probs=177.7

Q ss_pred             HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc--CCeEEEcCCCC-chhHHHHHHH
Q 010842          131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM--HKLVVYGSDQT-HSTFAKVCKL  207 (499)
Q Consensus       131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~--~~~~i~~s~~~-H~s~~ka~~~  207 (499)
                      ..++.+.+++++|.+.         .+++++|++||..|+..+|......   .|.  .+.+|+..+.. |-+...++.+
T Consensus        81 ~~~l~~~l~~~~~~~~---------~~~~~SGs~A~e~ai~~a~~~~~~~---~~~~~~~~~i~~~~~~yhg~~~~~~~~  148 (401)
T TIGR01885        81 FGEFAEYVTKLFGYDK---------VLPMNTGAEAVETAIKLARKWGYKV---KGIPENQAIIVSAKGNFHGRTLGAISM  148 (401)
T ss_pred             HHHHHHHHHhhcCCCE---------EEEeCccHHHHHHHHHHHHHHhhhh---cCCCCCCCEEEEECCCcCcccHHHHhC
Confidence            3444445888888654         3899999999999999998753211   111  24456655555 5565555555


Q ss_pred             hCC-------CC--CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHH
Q 010842          208 AGV-------SP--ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANE  274 (499)
Q Consensus       208 ~G~-------g~--~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~  274 (499)
                      .|-       |.  ..+..+|.       -|+++|++.+++.   +....+|++....+++|.+-|    +++|.++|++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~  218 (401)
T TIGR01885       149 STDPDSRTNFGPYVPGFKKIPY-------NNLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTK  218 (401)
T ss_pred             cCCcccccccCCCCCCceEeCC-------CCHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHH
Confidence            431       10  12333332       2789999988642   223445666666677899877    9999999999


Q ss_pred             hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842          275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS  353 (499)
Q Consensus       275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~  353 (499)
                      ||+++++|++|.++......+.....++ ..|.++++  |.++.. ...|+++.+. + +.+.+...  +..        
T Consensus       219 ~~~lli~DEv~~g~g~~G~~~~~~~~~~-~~di~~~g--K~l~~g~~~ig~v~~~~-~-i~~~~~~~--~~~--------  283 (401)
T TIGR01885       219 HNVLLIADEIQTGLGRTGKLLCVDHENV-KPDIVLLG--KALSGGVYPVSAVLADD-D-VMLTIKPG--EHG--------  283 (401)
T ss_pred             cCCEEEEechhhCCCccchhhHHhhcCC-CCCEEEee--ccccCCCCCcEEEEEcH-H-HHhhccCC--CCC--------
Confidence            9999999999865322111111111233 36888875  988754 3567776653 2 22322210  000        


Q ss_pred             cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc--CCCceEEEEEecCCCCCC
Q 010842          354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV--PRHFALVCFRLNPYPHSG  431 (499)
Q Consensus       354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~v~f~~~~~~~~~  431 (499)
                            .+. .+.+.....+..+++.+..+.   ..++..++++++.+.|++++ ..++.  .+...++.+.+....   
T Consensus       284 ------~t~-~~~p~~~~aa~a~L~~i~~~~---l~~~~~~~~~~~~~~L~~l~-~~~~~~~~g~g~~~~i~~~~~~---  349 (401)
T TIGR01885       284 ------STY-GGNPLACAVAVAALEVLEEEK---LAENAEKLGEIFRDQLKKLP-KPIITEVRGRGLLNAIVIDESK---  349 (401)
T ss_pred             ------CCC-CCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhcc-CCceeEEeecCeeEEEEeccCc---
Confidence                  011 122222333444555543333   44567778899999998873 22221  223334444443221   


Q ss_pred             cchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          432 SADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       432 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                         ......++.++|.++|..+ .+.   +...+|+++. ..+|++||++++++|.++.
T Consensus       350 ---~~~~~~~l~~~l~~~Gv~v-~~~---~~~~lRi~p~-l~~t~~~i~~~l~~l~~~l  400 (401)
T TIGR01885       350 ---TGRTAWDLCLKLKEKGLLA-KPT---HGNIIRLAPP-LVITEEQLDEGLEIIKKVI  400 (401)
T ss_pred             ---chhHHHHHHHHHHhCCEEE-Eec---CCCEEEEeCC-ccCCHHHHHHHHHHHHHHh
Confidence               0123567888888888543 332   3457999984 7899999999999998764

This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.

>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]

Probab=99.67  E-value=1.4e-13  Score=136.61  Aligned_cols=289  Identities=16%  Similarity=0.088  Sum_probs=198.7

Q ss_pred             hhHHHHHHHHHHHHHHcC-CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842          126 ASTELEIVVMDWLATMLK-LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       126 ~~~~lE~~~~~~la~l~g-~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka  204 (499)
                      ...+++++    +++.+| .+.+       ..++.+|+++.+...+.+.+.           ++..|+++.+++..+...
T Consensus        58 ~~~~l~~a----~a~~~~~~~~~-------~V~~gnGsde~i~~l~~~~~~-----------~gd~vl~~~Ptf~~Y~~~  115 (356)
T COG0079          58 DYRELRAA----LAEYYGVVDPE-------NVLVGNGSDELIELLVRAFVE-----------PGDTVLIPEPTFSMYEIA  115 (356)
T ss_pred             cHHHHHHH----HHHHhCCCCcc-------eEEEcCChHHHHHHHHHHhhc-----------CCCEEEEcCCChHHHHHH
Confidence            34555555    888888 5544       235567777766655555543           456788899999999999


Q ss_pred             HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh--CCEEEee
Q 010842          205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY--GIWVHVD  282 (499)
Q Consensus       205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~--~~~lhvD  282 (499)
                      ++..|.   +++.||.++   |.+|++.+.+.+.++++      +|+++.|+||||..-+.++|.++++..  +.+++||
T Consensus       116 a~~~g~---~~~~v~~~~---~~~d~~~~~~~~~~~~~------lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvD  183 (356)
T COG0079         116 AQLAGA---EVVKVPLKE---FRLDLDAILAAIRDKTK------LVFLCNPNNPTGTLLPREELRALLEALPEGGLVVID  183 (356)
T ss_pred             HHhcCC---eEEEecccc---cccCHHHHHHhhhcCCC------EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEe
Confidence            999999   999999874   79999999999987443      899999999999998888888887754  7899999


Q ss_pred             ccccchhccCccchhhhcCCCCCc--eeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842          283 AAYAGSACICPEFRHYLNGIERVD--SFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD  359 (499)
Q Consensus       283 ~A~g~~~~~~~~~~~~~~g~~~aD--si~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  359 (499)
                      +||.-+.-  +....++.   .-+  .+.=+..|.++.+ .-+|+. +.+++.........++|-.              
T Consensus       184 EAY~eF~~--~~~~~l~~---~~~nlivlRTfSKa~gLAGlRlGy~-ia~~~~i~~l~~vr~p~~v--------------  243 (356)
T COG0079         184 EAYIEFSP--ESSLELLK---YPPNLIVLRTFSKAFGLAGLRVGYA-IANPELIAALNKVRPPFNV--------------  243 (356)
T ss_pred             CchhhcCC--chhhhhcc---CCCCEEEEEecHHhhhcchhceeec-cCCHHHHHHHHHhcCCCCC--------------
Confidence            99977643  22111111   123  4556678977655 557874 4455444333333333311              


Q ss_pred             cccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHH
Q 010842          360 WQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEML  438 (499)
Q Consensus       360 ~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~  438 (499)
                               ..+...++...+. .+.+++.+++..+.++++.+.|++++ +.-+.++..|.+.++... .        . 
T Consensus       244 ---------~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv~~~~-~--------~-  303 (356)
T COG0079         244 ---------SSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGVFPSQANFVLVRVPD-A--------E-  303 (356)
T ss_pred             ---------CHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcEEEEECCC-c--------c-
Confidence                     2344445555442 25678888888899999999999986 553335667777777643 1        2 


Q ss_pred             HHHHHHHHHhcCCEEEEeee-ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          439 NRKLLDWVNSTGRVYLTHTI-VGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       439 ~~~l~~~l~~~g~~~~~~~~-~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      ...+.+.|.++|+++-.... .....++|+++.    |+++-++++++|+++.+.
T Consensus       304 ~~~l~~~L~~~giivR~~~~~~~~~~~lRitvg----t~een~~ll~AL~~~~~~  354 (356)
T COG0079         304 AAALAEALLKKGILVRDCSSVGLLPGYLRITVG----TPEENDRLLAALREVLKG  354 (356)
T ss_pred             HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeC----CHHHHHHHHHHHHHHHhc
Confidence            34677888888865443323 123468999996    677779999999987653

>PRK01278 argD acetylornithine transaminase protein; Provisional

Probab=99.67  E-value=1.3e-13  Score=140.24  Aligned_cols=293  Identities=13%  Similarity=0.087  Sum_probs=162.6

Q ss_pred             HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCC-CCchhHHHHHHHhC
Q 010842          132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSD-QTHSTFAKVCKLAG  209 (499)
Q Consensus       132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~-~~H~s~~ka~~~~G  209 (499)
                      .++.+.|+++.+.+.         .++++|||+||..|+.++|.....+    |. .+..|++.+ ..|.+..-+....|
T Consensus        76 ~~la~~l~~~~~~~~---------v~~~~sGseA~~~al~~ar~~~~~~----G~~~r~~vi~~~~~yhg~~~~~~~~~~  142 (389)
T PRK01278         76 ERLAERLVENSFADK---------VFFTNSGAEAVECAIKTARRYHYGK----GHPERYRIITFEGAFHGRTLATIAAGG  142 (389)
T ss_pred             HHHHHHHHhhCCCCE---------EEEcCCcHHHHHHHHHHHHHHHHhc----CCCCCCEEEEECCCcCCCcHHHHhccC
Confidence            334455777765432         4999999999999999998653221    21 223444444 44555444433333


Q ss_pred             CCCCCeEE---eeCCCCCCCc----cCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc----CChhHHHHHHHHhCCE
Q 010842          210 VSPANIRA---LPTSVDANFS----LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----DNVEPLAEVANEYGIW  278 (499)
Q Consensus       210 ~g~~~v~~---v~~~~~~~~~----~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d~l~~I~~ia~~~~~~  278 (499)
                      .   ....   .|...  ++.    .|+++|++.++++      +.+|++....+++|.+    +.+++|.++|++||++
T Consensus       143 ~---~~~~~~~~~~~~--~~~~~~~~d~~~l~~~l~~~------~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~  211 (389)
T PRK01278        143 Q---EKYLEGFGPLVP--GFDQVPFGDIEALKAAITPN------TAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLL  211 (389)
T ss_pred             C---hhhcccCCCCCC--CceEeCCCCHHHHHHhhCCC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence            2   1111   11111  112    5899999988643      3466666666666733    5799999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK  358 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  358 (499)
                      +++|++|.++.....-+.....++. .|.+++  .|.++..+..|+++.+++  +.+.+....    .          ..
T Consensus       212 lI~DEv~~g~g~~g~~~~~~~~~~~-pdi~t~--sK~l~~G~~ig~~~~~~~--~~~~~~~~~----~----------~~  272 (389)
T PRK01278        212 LIFDEVQCGMGRTGKLFAHEWAGVT-PDIMAV--AKGIGGGFPLGACLATEE--AAKGMTPGT----H----------GS  272 (389)
T ss_pred             EEEeccccCCCcCCcceeecccCCC-CCEEEE--ehhccCCcceEEEEEcHH--HHhccCCCC----C----------CC
Confidence            9999999875322111111112332 565554  688875566888877653  222221100    0          00


Q ss_pred             CcccCCCCCCCcHHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEecCCCCCC
Q 010842          359 DWQVGTGRRFKSLRLWMV---LRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRLNPYPHSG  431 (499)
Q Consensus       359 ~~~~~~sr~~~al~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~~~~~~~~  431 (499)
                        +. +   ...+...++   ++.+-.+   +..++..++.+++.+.|++    .|++-....+....+.+.+...    
T Consensus       273 --t~-~---~~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~~----  339 (389)
T PRK01278        273 --TY-G---GNPLAMAVGNAVLDVILAP---GFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVVP----  339 (389)
T ss_pred             --CC-C---ccHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHhhCCCceeeEecccEEEEEEEecC----
Confidence              00 1   123444444   4433222   2334445555555555543    3322111122223333444221    


Q ss_pred             cchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          432 SADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       432 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                             ..++.++|.++|..+...    +..++|+++. ...++++|++++++|.++.++
T Consensus       340 -------~~~~~~~l~~~GV~~~p~----~~~~lR~~p~-~~~~~~~i~~~l~~l~~~l~~  388 (389)
T PRK01278        340 -------NRDLVQALRDEGLLTVGA----GDNVVRLLPP-LIITEEEIDEALERLERAAES  388 (389)
T ss_pred             -------HHHHHHHHHHCCeEEeec----CCCEEEEeCC-cccCHHHHHHHHHHHHHHHHh
Confidence                   456778888888654332    3467999973 557899999999999988764

>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]

Probab=99.66  E-value=4.5e-14  Score=133.73  Aligned_cols=307  Identities=14%  Similarity=0.181  Sum_probs=194.7

Q ss_pred             ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc-
Q 010842          120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH-  198 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H-  198 (499)
                      .-...|-...+|++    ++.|=|--         +++-+++|..|..+|+.....           .++.|+.+..-+ 
T Consensus        57 sRi~NPT~~vlE~R----iAaLEGG~---------aa~a~aSG~AA~~~ai~~la~-----------aGD~iVss~~LYG  112 (426)
T COG2873          57 TRIMNPTTDVLEER----IAALEGGV---------AALAVASGQAAITYAILNLAG-----------AGDNIVSSSKLYG  112 (426)
T ss_pred             eeccCchHHHHHHH----HHHhhcch---------hhhhhccchHHHHHHHHHhcc-----------CCCeeEeeccccC
Confidence            33466888889998    66664432         347788899999988876543           456666554433 


Q ss_pred             ---hhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh
Q 010842          199 ---STFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY  275 (499)
Q Consensus       199 ---~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~  275 (499)
                         .-+....+.+|+   ++++|+.+       |++.++++|+++++      +|.+-.-.||-+.+-|+++|+++||++
T Consensus       113 GT~~lf~~tl~~~Gi---~v~fvd~~-------d~~~~~~aI~~nTk------avf~EtigNP~~~v~Die~ia~iAh~~  176 (426)
T COG2873         113 GTYNLFSHTLKRLGI---EVRFVDPD-------DPENFEAAIDENTK------AVFAETIGNPGLDVLDIEAIAEIAHRH  176 (426)
T ss_pred             chHHHHHHHHHhcCc---EEEEeCCC-------CHHHHHHHhCcccc------eEEEEeccCCCccccCHHHHHHHHHHc
Confidence               335566788999   99999743       79999999999998      677777778999999999999999999


Q ss_pred             CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCch-hHHHhhcCCccCCCCCCCCCCC
Q 010842          276 GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPG-LLVKALSTDPEYLKNKPSESNS  353 (499)
Q Consensus       276 ~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~-~l~~~~~~~~~yl~~~~~~~~~  353 (499)
                      |++++||..++..+++-| ..   .   +||.++-|..||+++. ...|.+++-... ....  ...-+.+........+
T Consensus       177 gvpliVDNT~atpyl~rP-~~---h---GADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~--~~rfP~~~~p~p~YhG  247 (426)
T COG2873         177 GVPLIVDNTFATPYLCRP-IE---H---GADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTA--NGRFPEFTTPDPSYHG  247 (426)
T ss_pred             CCcEEEecCCCcceecch-hh---c---CCCEEEEeecccccCCccccceEEEeCCcccccc--CCCCcccCCCCccccc
Confidence            999999999988743322 22   2   4999999999999765 334555553321 1110  1111111111111100


Q ss_pred             cccCCC-cc---------cCCCCCC----CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC----
Q 010842          354 VVDFKD-WQ---------VGTGRRF----KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR----  415 (499)
Q Consensus       354 ~~~~~~-~~---------~~~sr~~----~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~----  415 (499)
                      . .+.+ ++         .++-|..    .+...|..+  .|.|-+.-+++|++++|..+.+.|+++|.+.-++-|    
T Consensus       248 l-~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~l--qGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~  324 (426)
T COG2873         248 L-VYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLL--QGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLAS  324 (426)
T ss_pred             e-ehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHH--hchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCC
Confidence            0 0000 00         0111211    223344433  367889999999999999999999999988765421    


Q ss_pred             --------------CceEEEEEecCCCCCCcchhHHHHHHHHHHH------HhcCC---EEEEee--eE---C-------
Q 010842          416 --------------HFALVCFRLNPYPHSGSADTEMLNRKLLDWV------NSTGR---VYLTHT--IV---G-------  460 (499)
Q Consensus       416 --------------~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l------~~~g~---~~~~~~--~~---~-------  460 (499)
                                    ...+++|.+++..        +..+++.+.|      ..-|.   .++.|.  ..   .       
T Consensus       325 ~~~h~la~kyl~~g~g~vltF~~kgg~--------ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~a  396 (426)
T COG2873         325 HPYHALAKKYLPKGAGAVLTFGVKGGY--------EAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAA  396 (426)
T ss_pred             CcchhHHHhhccCCCceEEEEEecChH--------HHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhc
Confidence                          2356778776531        2233333322      11121   333321  11   0       


Q ss_pred             --CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          461 --GLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       461 --g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                        ....+|+|++     -||++.++..|++..+
T Consensus       397 Gv~~~~IRlSVG-----IEd~~DiiaDl~qAl~  424 (426)
T COG2873         397 GVTPDLIRLSVG-----IEDIDDIIADLEQALE  424 (426)
T ss_pred             CCCCCcEEEEec-----cCCHHHHHHHHHHHHh
Confidence              2467999996     4688888888888654

>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []

Probab=99.66  E-value=1.9e-14  Score=142.78  Aligned_cols=307  Identities=13%  Similarity=0.117  Sum_probs=180.8

Q ss_pred             cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEc---CCCC
Q 010842          121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYG---SDQT  197 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~---s~~~  197 (499)
                      |.......++|.-+.+.++++||.++..|+    --+=..|||.||+.++.+..+           ++..|+.   +...
T Consensus        58 y~G~~~id~iE~la~~ra~~lF~~~~~~w~----anvqp~SGs~An~av~~aLl~-----------pGD~Im~l~l~~GG  122 (399)
T PF00464_consen   58 YGGCEYIDEIEELAIERAKELFGAEPKEWY----ANVQPHSGSQANLAVYMALLK-----------PGDTIMGLSLPHGG  122 (399)
T ss_dssp             SSSTHHHHHHHHHHHHHHHHHHT-STTTEE----EE---SSHHHHHHHHHHHHT------------TT-EEEEEEGGGT-
T ss_pred             ccCcchhhHHHHHHHHHHHHHhCCCcccce----EEeecCCchHHHHHHHHHHHh-----------hcCcEEecChhhcc
Confidence            344567789999999999999999744321    124466899999888777654           4555543   3445


Q ss_pred             chhHHHHHHH-------hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHH
Q 010842          198 HSTFAKVCKL-------AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAE  270 (499)
Q Consensus       198 H~s~~ka~~~-------~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~  270 (499)
                      |.|.......       ...   +++.+++|++ ++.+|.+++++.+.+.+     |-+|++-.-  .+--.-|++++.+
T Consensus       123 Hlshg~~~~~~~~~~~~~~~---~~~~y~~d~~-~~~ID~d~l~~~a~~~k-----PklIi~G~S--~y~~~~d~~~~re  191 (399)
T PF00464_consen  123 HLSHGSSVNFKKISASGLYF---ESVPYPVDPD-TGLIDYDELEKLAKEHK-----PKLIICGAS--SYPRPIDFKRFRE  191 (399)
T ss_dssp             -GGGT-TTSHSBSSHHHHHS---EEEEEEB-TT-TSSB-HHHHHHHHHHH-------SEEEEE-S--STSS---HHHHHH
T ss_pred             cccccccccccccccccceE---EEEeeeeecC-CCeECHHHHHHHHhhcC-----CCEEEECch--hccCccCHHHHHH
Confidence            6664433222       334   6777888864 47999999999998753     556655543  3445578999999


Q ss_pred             HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEe-------------CchhHHHhh
Q 010842          271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVK-------------QPGLLVKAL  337 (499)
Q Consensus       271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r-------------~~~~l~~~~  337 (499)
                      ||++.|.+|++|++|-.+.+....+...   ++.||+++.+.||.|.+|. +|+++++             +.+ +.+.+
T Consensus       192 Iad~vga~l~~D~sH~~GLIa~g~~~~P---~~~ADvvt~sThKtl~GPr-ggiI~~~~~~~~~~~~~~~~~~~-l~~~I  266 (399)
T PF00464_consen  192 IADEVGAYLMADISHIAGLIAGGLFPNP---FPYADVVTGSTHKTLRGPR-GGIILTNKGSKNVDKKGKEIDEE-LAEKI  266 (399)
T ss_dssp             HHHHTT-EEEEE-TTTHHHHHTTSS--G---CCTSSEEEEESSGGG-SSS--EEEEES-SEEEE-TTS-EEEHH-HHHHH
T ss_pred             HHHhcCcEEEecccccccceehheecCc---cccceEEEeeccccccccC-ceEEEEcCCccccCCcccccHHH-HHHHh
Confidence            9999999999999997776655444433   3459999999999999995 5888887             222 22222


Q ss_pred             cCCccCCCCCCCCCCCcccCCCcccCCCCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CC
Q 010842          338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PR  415 (499)
Q Consensus       338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~  415 (499)
                      ...   ++.              +.+++-... ..++..+++......++++.++..++|+.|.+.|.+. |++++. .+
T Consensus       267 ~~a---vfP--------------~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~~ggT  328 (399)
T PF00464_consen  267 DSA---VFP--------------GLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQER-GFKVVTGGT  328 (399)
T ss_dssp             HHH---HTT--------------TT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS-
T ss_pred             ccc---cCC--------------CcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhhC-CcEEEECCC
Confidence            110   111              111121111 2344555655555667899999999999999999997 999985 46


Q ss_pred             CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE--C----CEEEEEEecc---CCCCcHHHHHHHHHH
Q 010842          416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV--G----GLYMLRFAVG---ASLTDERHVVAAWEL  485 (499)
Q Consensus       416 ~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~----g~~~lRi~~~---~~~~t~~di~~l~~~  485 (499)
                      +.+.|.+.+.+.+      +  ..++..+.|.+.|+.+ ....+  +    ....+|+...   .-...++|++++.+.
T Consensus       329 d~H~vlvd~~~~~------~--~g~~a~~~Le~~gI~v-nkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~  398 (399)
T PF00464_consen  329 DNHQVLVDLRSFG------I--DGKEAEKALEEAGIIV-NKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAEL  398 (399)
T ss_dssp             SSSEEEEEGGGGT------S---HHHHHHHHHHTTEE--EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHH
T ss_pred             CCCeEEEEecccc------c--chHHHHHHHHhcCeee-cccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhh
Confidence            6777877775432      1  1344455566667543 22211  1    1246999872   123356777776654

The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....

>PRK02936 argD acetylornithine aminotransferase; Provisional

Probab=99.66  E-value=7.8e-14  Score=141.41  Aligned_cols=298  Identities=12%  Similarity=0.053  Sum_probs=170.2

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~  206 (499)
                      ..+++.++.+++++..+.+.         .++++||++||..|+..++...       | ++.+|......|-+..-+..
T Consensus        69 ~~~~~~~la~~l~~~~~~~~---------~~~~~sG~~a~~~A~~~a~~~~-------g-~~~vi~~~~~~Hg~~~~~~~  131 (377)
T PRK02936         69 TNSLQEEVASLLAENSAGDL---------VFFCNSGAEANEAALKLARKHT-------G-KSKIVTFEQSFHGRTFGTMS  131 (377)
T ss_pred             CCHHHHHHHHHHHhcCCCCE---------EEEeCCcHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCCCcHHhhh
Confidence            45677887788888766432         4899999999999999887531       1 23345545566766655555


Q ss_pred             HhCCCCCCeEEeeCCCCCCC--ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC----ChhHHHHHHHHhCCEEE
Q 010842          207 LAGVSPANIRALPTSVDANF--SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD----NVEPLAEVANEYGIWVH  280 (499)
Q Consensus       207 ~~G~g~~~v~~v~~~~~~~~--~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id----~l~~I~~ia~~~~~~lh  280 (499)
                      ..|.....-...|...+-.+  .-|+++|++.+.+++      .+|++....++.|.+.    .+++|.++|++||++++
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI  205 (377)
T PRK02936        132 ATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEV------AAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLI  205 (377)
T ss_pred             ccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCe------EEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence            44321000001111110000  117899998886433      3666666666666663    39999999999999999


Q ss_pred             eeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCc
Q 010842          281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDW  360 (499)
Q Consensus       281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~  360 (499)
                      +|.+|.++......+.....++ ..|.++  ..|.++..+..|+++.+++  +.+.+...   . .              
T Consensus       206 ~DEv~~g~g~~g~~~~~~~~~~-~~di~t--~sK~l~~G~~ig~v~~~~~--~~~~~~~~---~-~--------------  262 (377)
T PRK02936        206 IDEVQTGIGRTGTLFAYEQFGL-DPDIVT--VAKGLGNGIPVGAMIGKKE--LGTAFGPG---S-H--------------  262 (377)
T ss_pred             EeccccCCCcCchhhHHHhhCC-CCcEEE--EcccccCCCccEEEEEcHH--HHhhccCC---C-C--------------
Confidence            9999976432111101011232 246655  5899885556787776532  32332210   0 0              


Q ss_pred             ccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEecCCCCCCcchhH
Q 010842          361 QVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRLNPYPHSGSADTE  436 (499)
Q Consensus       361 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~  436 (499)
                      +  .+.....+...+++..+..-..++.+++..++.+++++.|++    .+.+..+ .+...++.+.+.+.         
T Consensus       263 ~--~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v-~~~g~~~~i~~~~~---------  330 (377)
T PRK02936        263 G--STFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKNI-RGKGLMIGIECTEE---------  330 (377)
T ss_pred             C--CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEeE-eecceEEEEEecch---------
Confidence            0  000112344444444432111234455666666677666655    3333222 12334555555321         


Q ss_pred             HHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          437 MLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       437 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                        ...+.+.+.++|.++..    .+..++|+++. ...++++|++++++|.++
T Consensus       331 --~~~~~~~l~~~gv~v~~----~g~~~lRi~p~-~~~~~~~i~~~i~~l~~~  376 (377)
T PRK02936        331 --VAPVIEQLREEGLLVLS----AGPNVIRLLPP-LVVTKEELDQAVYLLKKV  376 (377)
T ss_pred             --HHHHHHHHHHCCeEEec----CCCCEEEEECC-cccCHHHHHHHHHHHHHh
Confidence              45677778888865433    23467999973 668999999999999765

>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]

Probab=99.66  E-value=3.6e-14  Score=134.80  Aligned_cols=299  Identities=15%  Similarity=0.126  Sum_probs=205.6

Q ss_pred             hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH
Q 010842          126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC  205 (499)
Q Consensus       126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~  205 (499)
                      -...||++    |++|-+-+..         ++.+++-.||-..|...-..         +|+.+||-.+..|.|+...+
T Consensus       217 ~hv~LE~e----LA~LHqK~aA---------LlFsSCfVANDstLftLak~---------lpgcei~SD~gNHASMI~GI  274 (570)
T KOG1360|consen  217 HHVRLEAE----LADLHQKEAA---------LLFSSCFVANDSTLFTLAKK---------LPGCEIFSDEGNHASMIQGI  274 (570)
T ss_pred             hhhhHHHH----HHHHhcCcce---------eeeeeeeeccchHHHHHHHH---------CCCcEEeccccchHHHHHHh
Confidence            34566766    9999876654         55555555665555443222         37888998888899999998


Q ss_pred             HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842          206 KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY  285 (499)
Q Consensus       206 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~  285 (499)
                      +..++   .-....       .-|+++|++.++.-.  ...|.+|.+-...+..|++-||+||++++++||..-.+|.+|
T Consensus       275 rns~v---~K~IFr-------HND~~hL~~lL~~~~--~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVH  342 (570)
T KOG1360|consen  275 RNSRV---PKHIFR-------HNDLDHLEQLLQSSP--KSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVH  342 (570)
T ss_pred             hhcCC---cceeec-------cCCHHHHHHHHHhCC--CCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhh
Confidence            88887   333333       349999999998743  357889999999999999999999999999999999999998


Q ss_pred             cchhccCccchhh--hcC-CCCCceeEecccccccCCCcceEEEEeCchhHHHhh-cCCccCCCCCCCCCCCcccCCCcc
Q 010842          286 AGSACICPEFRHY--LNG-IERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL-STDPEYLKNKPSESNSVVDFKDWQ  361 (499)
Q Consensus       286 g~~~~~~~~~~~~--~~g-~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~  361 (499)
                      +-+.+ .|.....  .+| +.+.|.|+...-|.++.-  .|.+..  ...+...+ +..+++++...-            
T Consensus       343 AVGlY-G~rGaGvgerdGvm~kvDiIsGTLgKafGcV--GGYIAa--t~~LvDmiRSyAaGFIFTTSL------------  405 (570)
T KOG1360|consen  343 AVGLY-GPRGAGVGERDGVMHKVDIISGTLGKAFGCV--GGYIAA--TRKLVDMIRSYAAGFIFTTSL------------  405 (570)
T ss_pred             hhccc-cCCCCCccccCCcchhhhhcccchhhhcccc--cceehh--hhhHHHHHHHhcCceEEecCC------------
Confidence            76543 2211110  123 456999999998987643  233332  22233333 445666665421            


Q ss_pred             cCCCCCCCc-HHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHH
Q 010842          362 VGTGRRFKS-LRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLN  439 (499)
Q Consensus       362 ~~~sr~~~a-l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~  439 (499)
                           +... ..+..+.+.+ +.+| +...+...++.+|+++.|.+. |+.++..| +.++..++.+         ..++
T Consensus       406 -----PP~vl~GAleaVr~lk~~eg-~~lR~~hqrnv~~~kq~l~~~-GiPVi~~p-SHIiPv~vgd---------a~l~  468 (570)
T KOG1360|consen  406 -----PPMVLAGALEAVRILKSEEG-RVLRRQHQRNVKYVKQLLMEL-GIPVIPNP-SHIIPVRVGD---------AALA  468 (570)
T ss_pred             -----ChHHHHhHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHHc-CCcccCCC-cceeeeeccC---------HHHH
Confidence                 1111 1223344443 3344 334455667788999999887 88877444 4788887755         3567


Q ss_pred             HHHHHHHHhcCCEEEE----eeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          440 RKLLDWVNSTGRVYLT----HTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       440 ~~l~~~l~~~g~~~~~----~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .++++.|+.+..+|+.    |+...|...+|++.+ |..|.+-++.+++++..+-+++
T Consensus       469 ~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPT-P~HT~~mm~~lv~~l~~vw~~v  525 (570)
T KOG1360|consen  469 KQASDILISKHNIYVQAINYPTVARGTERLRIAPT-PHHTPQMMNILVNALLDVWNEV  525 (570)
T ss_pred             HHHHHHHHHhcCeEEEeccCCcccccceeeecCCC-CCCCHHHHHHHHHHHHHHHHHc
Confidence            8888888877777764    566678888999996 8899999999999998876553

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed

Probab=99.65  E-value=3.3e-13  Score=137.89  Aligned_cols=298  Identities=13%  Similarity=0.121  Sum_probs=170.9

Q ss_pred             HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCCchhHHHHHHHhC--
Q 010842          133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHSTFAKVCKLAG--  209 (499)
Q Consensus       133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~H~s~~ka~~~~G--  209 (499)
                      ++.+.|+++.+.+.         .+++++|++||..|+..+|......   .+. ++.+|......|-+...+..+.|  
T Consensus        86 ~l~~~l~~~~~~~~---------~~~~~sGseA~e~a~klar~~~~~~---~~~~~~~ii~~~~~~HG~~~~~~~~~~~~  153 (403)
T PRK05093         86 RLAKKLIDATFAER---------VFFANSGAEANEAAFKLARRYACDR---HGPEKTEIIAFHNSFHGRTLFTVSVGGQP  153 (403)
T ss_pred             HHHHHHHhhCCCCE---------EEEeCchHHHHHHHHHHHHHHHhhc---CCCCCCeEEEEcCCcCCchhhhHhhcCCh
Confidence            44455777776543         3899999999999999998754211   011 34456666667877665444322  


Q ss_pred             -----CCC--CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-CC----hhHHHHHHHHhCC
Q 010842          210 -----VSP--ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-DN----VEPLAEVANEYGI  277 (499)
Q Consensus       210 -----~g~--~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d~----l~~I~~ia~~~~~  277 (499)
                           ++.  ..++.+|.       -|++++++.+.++      +.+|++. +.+++|.+ .|    +++|.++|++||+
T Consensus       154 ~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~  219 (403)
T PRK05093        154 KYSDGFGPKPADITHVPF-------NDLAAVKAVIDDH------TCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNA  219 (403)
T ss_pred             hhhhcCCCCCCCcEEeCC-------CCHHHHHHHhcCC------eEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence                 211  12333332       2789999888543      3355555 55555544 33    9999999999999


Q ss_pred             EEEeeccccchhccCccchh-hhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          278 WVHVDAAYAGSACICPEFRH-YLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~-~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      ++++|.+|.++... ..... ...++ ..|..++  -|.++..+..|+++.++.  +.+.+...   ...          
T Consensus       220 ~lI~DEv~~g~g~~-g~~~~~~~~~~-~pdi~s~--sK~l~~G~rig~vv~~~~--i~~~l~~~---~~~----------  280 (403)
T PRK05093        220 LLIFDEVQTGMGRT-GDLFAYMHYGV-TPDILTS--AKALGGGFPIGAMLTTAE--IASHFKVG---THG----------  280 (403)
T ss_pred             EEEEechhhCCCCC-ccchhhhhcCC-CCCEEEe--cccccCCcceEEEEEcHH--HHhhcCCC---CCC----------
Confidence            99999999865322 11111 11222 2565554  598875566888887653  22222210   000          


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC-C-CceEEEEEecCCCCCCcc
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP-R-HFALVCFRLNPYPHSGSA  433 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~-~-~~~~v~f~~~~~~~~~~~  433 (499)
                         .+.    ....+..++++..+-.-.-.+..++..++.+++.+.|+++. .+.++.. + ....+.+.+.+..     
T Consensus       281 ---~t~----~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~-----  348 (403)
T PRK05093        281 ---STY----GGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQY-----  348 (403)
T ss_pred             ---CCC----CCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcc-----
Confidence               000    11223333333322111112445667777888888887651 1111111 1 2233444443310     


Q ss_pred             hhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          434 DTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       434 ~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                        .....++..++.++|..+. +   .+..++|+++. ...++++|++++++|.++..++.
T Consensus       349 --~~~~~~~~~~l~~~Gv~v~-~---~g~~~lRl~~~-~~~~~~~i~~~~~~l~~~l~~~~  402 (403)
T PRK05093        349 --KGRARDFLNAAAEEGVMVL-V---AGPDVLRFAPS-LVIEEADIDEGLARFEKAVAKVV  402 (403)
T ss_pred             --hhHHHHHHHHHHHCCeEEe-c---CCCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHhc
Confidence              1235678888888885543 2   23467999884 66789999999999999887653

>PRK02627 acetylornithine aminotransferase; Provisional

Probab=99.65  E-value=1.6e-13  Score=140.07  Aligned_cols=303  Identities=14%  Similarity=0.128  Sum_probs=170.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcC-CCCchhHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGS-DQTHSTFAKVCK  206 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s-~~~H~s~~ka~~  206 (499)
                      .....++.++++++.|.+.         .++++||++|+..++.+++....+    .+..+..|++. ...|.....+..
T Consensus        80 ~~~~~~la~~l~~~~~~~~---------v~~~~gg~eA~~~al~~a~~~~~~----~~~~~~~ii~~~~~yhg~~~~~~~  146 (396)
T PRK02627         80 IEPQEELAEKLVELSGMDK---------VFFCNSGAEANEAAIKLARKYGHK----KGIEKPEIITAENSFHGRTLATLS  146 (396)
T ss_pred             CHHHHHHHHHHHhhcCCCE---------EEECCCcHHHHHHHHHHHHHHhcc----cCCCCCeEEEECCCcCcccHHHHH
Confidence            4566677777888887643         499999999999999988764211    01112334444 444544333333


Q ss_pred             HhCCCCCCeEEeeCCCCCCC----ccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc----CChhHHHHHHHHhCCE
Q 010842          207 LAGVSPANIRALPTSVDANF----SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----DNVEPLAEVANEYGIW  278 (499)
Q Consensus       207 ~~G~g~~~v~~v~~~~~~~~----~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d~l~~I~~ia~~~~~~  278 (499)
                      ..+.........|... + +    ..|+++|++++.++      +.+|++....+++|..    +.+++|.++|++||++
T Consensus       147 ~~~~~~~~~~~~~~~~-~-~~~~~~~d~~~l~~~i~~~------~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~  218 (396)
T PRK02627        147 ATGQPKYQEGFEPLVE-G-FIYVPFNDIEALKAAITDK------TAAVMLEPIQGEGGVNPADKEYLQALRELCDENGIL  218 (396)
T ss_pred             hcCCccccccCCCCCC-C-ceEeCCCCHHHHHHhcCCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence            3332000001122211 1 1    22899999988432      3467776667777743    3489999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK  358 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  358 (499)
                      +++|++|+++............++ ..|.+++  -|.++..+..|+++.+++  +.+.+...    ...          .
T Consensus       219 lI~DE~~~g~g~~g~~~~~~~~~~-~pdi~t~--sK~~~~G~rig~~~~~~~--~~~~~~~~----~~~----------~  279 (396)
T PRK02627        219 LILDEVQTGMGRTGKLFAYQHYGI-EPDIMTL--AKGLGGGVPIGAVLAKEK--VADVFTPG----DHG----------S  279 (396)
T ss_pred             EEEechhcCCCccCceeeehhcCC-CCCEEEE--cchhhCCcccEEEEEcHH--HHhccCCC----CCC----------C
Confidence            999999986532111011111232 2566665  588886567888887643  22222110    000          0


Q ss_pred             CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEecCCCCCCcch
Q 010842          359 DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRLNPYPHSGSAD  434 (499)
Q Consensus       359 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~  434 (499)
                      .+   +   ...+...+++..+..-.-++..++..++.+++.+.|.+    .|.+..+ ......+.+.+.. .      
T Consensus       280 t~---~---~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~i~~~~-~------  345 (396)
T PRK02627        280 TF---G---GNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEV-RGLGLMIGIELDR-P------  345 (396)
T ss_pred             CC---C---CCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCeeee-ccCcEEEEEEecC-c------
Confidence            00   1   12333344333331111123445555566666665544    3322222 2233455555521 1      


Q ss_pred             hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          435 TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       435 ~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                          ..++.+++.++|..+ .+.   +..++|+++. ...++++|++++++|.++.+++
T Consensus       346 ----~~~~~~~l~~~Gv~v-~~~---~~~~lRi~~~-~~~~~~~i~~~~~~l~~~l~~~  395 (396)
T PRK02627        346 ----AAEIVKKALEKGLLI-NVT---GDNVLRLLPP-LIISKEEIDEAVDRLEEVLKEL  395 (396)
T ss_pred             ----HHHHHHHHHHCCeEE-eec---CCCEEEEECC-cccCHHHHHHHHHHHHHHHHhh
Confidence                456788888888554 332   2356999873 5679999999999999987765

>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen)

Probab=99.65  E-value=1.4e-14  Score=140.59  Aligned_cols=314  Identities=16%  Similarity=0.109  Sum_probs=201.6

Q ss_pred             hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH-HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842          126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS-DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt-~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka  204 (499)
                      ....+-..++..+-+..|++...      ..++++.+| +++.+++.+.|.+  +       ....|+.|...|+|-.|+
T Consensus        53 ~~~~ltn~l~~d~~~~~G~~~~~------~~~~vP~atgm~l~l~l~~l~~r--~-------~a~~Viw~ridqkSc~ka  117 (389)
T PF05889_consen   53 LLAKLTNSLVLDALRLAGLRSVK------SCFVVPMATGMSLTLCLLALRMR--P-------KAKYVIWPRIDQKSCFKA  117 (389)
T ss_dssp             HHHHHHHHHHHHHHHHTTHTTHC------EEEEESS-HHHHHHHHHHHHHHH--C-------T--EEEEEEEETHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCcccc------ceEEEecccccHHHHHHHHHhcc--c-------CCceEEEeeccccchHHH
Confidence            33455666666677889998542      457777777 7777778777722  1       223466689999999999


Q ss_pred             HHHhCCCCCCeEEeeCCCCC-CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-CChhHHHHHHHHhCCEEEee
Q 010842          205 CKLAGVSPANIRALPTSVDA-NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-DNVEPLAEVANEYGIWVHVD  282 (499)
Q Consensus       205 ~~~~G~g~~~v~~v~~~~~~-~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d~l~~I~~ia~~~~~~lhvD  282 (499)
                      +...|+   +++.||...++ ....|.+.+++.+++.   |..+.+++.|+.+-..|.. |++++|+++|++||++++|.
T Consensus       118 i~~AGl---~~~vV~~~~~~d~l~td~~~ie~~i~~~---G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvN  191 (389)
T PF05889_consen  118 IERAGL---EPVVVENVLEGDELITDLEAIEAKIEEL---GADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVN  191 (389)
T ss_dssp             HHHTT----EEEEE-EEEETTEEEEHHHHHHHHHHHH---CGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEE
T ss_pred             HHhcCC---eEEEeeccCCCCeeeccHHHHHHHHHHh---CCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEc
Confidence            999999   99999964322 3577899999998543   5567788888877777777 55999999999999999999


Q ss_pred             ccccchhccCccchhhh---cCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842          283 AAYAGSACICPEFRHYL---NGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD  359 (499)
Q Consensus       283 ~A~g~~~~~~~~~~~~~---~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  359 (499)
                      +|||.-.-   ...+++   ....+.|.++-+.-|-|.+|.|.+++...++..+...-.   .|-               
T Consensus       192 nAYgvQ~~---~~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~---~Yp---------------  250 (389)
T PF05889_consen  192 NAYGVQSS---KCMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSK---EYP---------------  250 (389)
T ss_dssp             GTTTTT-H---HHHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHH---TSH---------------
T ss_pred             cchhhhHH---HHHHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHHHHHHH---Hhh---------------
Confidence            99987321   122211   123479999999999999999999998887654432211   121               


Q ss_pred             cccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEEcCCCce-EEEEEecCCCCCCcc
Q 010842          360 WQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP---RFEIVVPRHFA-LVCFRLNPYPHSGSA  433 (499)
Q Consensus       360 ~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~-~v~f~~~~~~~~~~~  433 (499)
                           +|-+  ..+.+...+..+|..|+...+....+.-.++.++|++..   +-.++..|... .+.|.......... 
T Consensus       251 -----GRas~sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~-  324 (389)
T PF05889_consen  251 -----GRASASPSLDLFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQ-  324 (389)
T ss_dssp             -----SHBTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCS-
T ss_pred             -----hhhhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhcc-
Confidence                 1112  236678889999999999999999999988888887531   33444334322 24444433211011 


Q ss_pred             hhHHHHHHHHHHHHhcCC---EEEEeeeECC--------EEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          434 DTEMLNRKLLDWVNSTGR---VYLTHTIVGG--------LYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       434 ~~~~~~~~l~~~l~~~g~---~~~~~~~~~g--------~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                         .....|...|..+|+   -.+.+..-..        ..+|-++.+ ..++++|||.++++|+++.+
T Consensus       325 ---k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~Asa-iG~~~eevd~~v~rL~k~i~  389 (389)
T PF05889_consen  325 ---KDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASA-IGMTREEVDYFVKRLDKIIK  389 (389)
T ss_dssp             ---SHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE--TT--HHHHHHHHHHHHHHHH
T ss_pred             ---chhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHH-hCCCHHHHHHHHHHHHHHhC
Confidence               112345566666662   1111110111        156777553 67999999999999998864

Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.

>PLN02397 aspartate transaminase

Probab=99.65  E-value=2.5e-13  Score=139.44  Aligned_cols=321  Identities=12%  Similarity=0.053  Sum_probs=193.0

Q ss_pred             HHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCC--CccccCCCccEEEcCCh--HHHHHHHHHHHHHHHHh
Q 010842          105 FLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLP--KTFMFSGTGGGVIQNTT--SDSILVTLIAARDRALD  179 (499)
Q Consensus       105 ~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~--~~~~~~~~~~g~~t~gg--t~A~~~al~~ar~~~~~  179 (499)
                      .+.+.+...++.+ ...|....+..++.+++.+|+.+..+.+  +...     ...-+.+|  +.+++.++.+..+    
T Consensus        70 ~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i-----~~~~i~~g~Ga~~l~~~~~~~~~----  140 (423)
T PLN02397         70 VVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRV-----ATVQCLSGTGSLRLGAEFLARFY----  140 (423)
T ss_pred             HHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCee-----EeeecccchHHHHHHHHHHHHhC----
Confidence            3444443333333 3368888899999999888885543221  1100     00112233  3334444443321    


Q ss_pred             HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc
Q 010842          180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST  259 (499)
Q Consensus       180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~  259 (499)
                             ++..|+++++++..+...++..|.   +++.+|.....++.+|++.+++.+.+.   ..+..+++.+.++|||
T Consensus       141 -------pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~v~l~~~~~~~~d~~~l~~~l~~~---~~~~~~i~~~~P~NPT  207 (423)
T PLN02397        141 -------PGSTIYIPNPTWGNHHNIFRDAGV---PVRTYRYYDPKTRGLDFDGLLEDLKAA---PDGSFVLLHACAHNPT  207 (423)
T ss_pred             -------CCCEEEEeCCCchhHHHHHHHcCC---eEEEeecccCcCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCC
Confidence                   567899999999999999999999   999999832224799999999887542   1124577888899999


Q ss_pred             ccc---CChhHHHHHHHHhCCEEEeeccccchhccCc--cchh--hhcCCCCCceeEecccccccC-CCcceEEE--EeC
Q 010842          260 TAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICP--EFRH--YLNGIERVDSFSFSPHKWLLS-YLDCCCLW--VKQ  329 (499)
Q Consensus       260 G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~--~~~~--~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~--~r~  329 (499)
                      |.+   +.+++|+++|++||+|+++|.+|..+.....  ....  .......--.++.+..|.++. ..-+|+++  ..+
T Consensus       208 G~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~G~RvG~~v~~~~~  287 (423)
T PLN02397        208 GVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILVAQSYAKNMGLYGERVGALSVVCKS  287 (423)
T ss_pred             CCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEEEEECcccCCCccccceEEEEEeCC
Confidence            999   5577889999999999999999987753110  0111  111111112445678999985 46688875  333


Q ss_pred             chhHHH---hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH--------HHHHHHHHHHHHHHHH
Q 010842          330 PGLLVK---ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV--------LNLQSHIRSDIRLAKM  398 (499)
Q Consensus       330 ~~~l~~---~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~--------~g~~~~~~~~~~~a~~  398 (499)
                      +..+..   .+.........                 +   ...+..+++...+..        +.++++.++..+.++.
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~-----------------~---~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~  347 (423)
T PLN02397        288 ADVAVRVKSQLKLIARPMYS-----------------N---PPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQK  347 (423)
T ss_pred             HHHHHHHHHHHHHHHhcccC-----------------C---CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            332211   11110000000                 0   012333444333321        1256667788888999


Q ss_pred             HHHHHhcCCC----eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCC
Q 010842          399 FEGFVKSDPR----FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLT  474 (499)
Q Consensus       399 l~~~L~~~~~----~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~  474 (499)
                      +.+.|+++ +    ++++ .|+.+.+.|--.+             ..++++|.++..+++.+   ++    |+++++  .
T Consensus       348 l~~~L~~~-~~~~~~~~~-~p~gg~fl~~~l~-------------~~~~~~Ll~~~~V~v~~---~~----Ri~~~~--~  403 (423)
T PLN02397        348 LYDALEAR-GSPGDWSHI-TKQIGMFSFTGLN-------------KEQVDRMTKEYHIYMTR---DG----RISMAG--L  403 (423)
T ss_pred             HHHHHHhc-CCCCCCCcc-cCCceEEEecCCC-------------HHHHHHHHHhCCEEECC---CC----eEEEee--C
Confidence            99999987 4    5544 4555555542111             23556665554444432   12    999853  7


Q ss_pred             cHHHHHHHHHHHHHHHH
Q 010842          475 DERHVVAAWELIMEGAD  491 (499)
Q Consensus       475 t~~di~~l~~~l~~~~~  491 (499)
                      ++++|++++++|+++..
T Consensus       404 ~~~~i~~~~~~i~~~~~  420 (423)
T PLN02397        404 SSKNVPYLADAIHAVVT  420 (423)
T ss_pred             CHHHHHHHHHHHHHHHh
Confidence            88999999999999864

>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.65  E-value=3.7e-14  Score=135.80  Aligned_cols=314  Identities=13%  Similarity=0.097  Sum_probs=203.0

Q ss_pred             ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEc---CCC
Q 010842          120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYG---SDQ  196 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~---s~~  196 (499)
                      .|....-..++|..+++...++||.+...        +-..||+.||+.+..+..+           ++..|+.   +..
T Consensus        63 yYgGce~VD~vE~laierak~LFga~~an--------VQPhSGs~AN~av~~All~-----------pGDtimgm~l~~G  123 (413)
T COG0112          63 YYGGCEYVDEVEELAIERAKKLFGAEYAN--------VQPHSGSQANQAVYLALLQ-----------PGDTIMGLDLSHG  123 (413)
T ss_pred             ccCCCeeHHHHHHHHHHHHHHHhCCCccc--------cCCCCchHHHHHHHHHHcC-----------CCCeEecccCCCC
Confidence            45566778899999999999999998653        6667899999988877654           5555554   344


Q ss_pred             CchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC
Q 010842          197 THSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG  276 (499)
Q Consensus       197 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~  276 (499)
                      .|-+.-.-....|.- -+++..++|++ ++.+|.|++++.+.+.+     |.+|++  |.+.+--.-|++++.+||++.|
T Consensus       124 GHltHg~~v~~sG~~-~~~v~Y~vd~e-t~~IDyD~~~k~a~e~k-----PK~ii~--G~SaY~r~id~~~~reIad~VG  194 (413)
T COG0112         124 GHLTHGSPVNFSGKL-FNVVSYGVDPE-TGLIDYDEVEKLAKEVK-----PKLIIA--GGSAYSRPIDFKRFREIADEVG  194 (413)
T ss_pred             CcccCCCCCCcccee-EEeEecccccc-cCccCHHHHHHHHHHhC-----CCEEEE--CccccccccCHHHHHHHHHHhC
Confidence            455443222233321 15666777754 47999999999987753     655544  4456667789999999999999


Q ss_pred             CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          277 IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       277 ~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      .+|.+|.||=.+......+..   -++.||++|.+.||+|.+|. .|++++++.+... .+...   ++.          
T Consensus       195 A~L~~DmAHiaGLVA~G~~p~---P~~~AdvVTtTTHKTlrGPr-GG~Il~~~eel~k-kin~a---VFP----------  256 (413)
T COG0112         195 AYLMVDMAHVAGLIAGGVHPN---PLPHADVVTTTTHKTLRGPR-GGIILTNDEELAK-KINSA---VFP----------  256 (413)
T ss_pred             ceEEehHHHHHHHHhcccCCC---CCCccceEeCCcccCCCCCC-ceEEEeccHHHHH-Hhhhh---cCC----------
Confidence            999999998766554433332   34569999999999999995 5777777744332 22110   111          


Q ss_pred             CCCcccCCCCCCCc-HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcch
Q 010842          357 FKDWQVGTGRRFKS-LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSAD  434 (499)
Q Consensus       357 ~~~~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~  434 (499)
                          +.+++.-... .+...+++.....+++++.++..++|+.|.+.|.+. |++++.. .+...+.+.+.+.. .+   
T Consensus       257 ----g~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnHl~lVDl~~~~-~~---  327 (413)
T COG0112         257 ----GLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNHLVLVDLRSKG-LT---  327 (413)
T ss_pred             ----ccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccceEEEEEcccCC-CC---
Confidence                1222222222 233445555566889999999999999999999986 9999863 45566666555321 01   


Q ss_pred             hHHHHHHHHHHHHhcCCEEEEee-eEC-----CEEEEEEec---cCCCCcHHHHHHHHHHHHHHHHH
Q 010842          435 TEMLNRKLLDWVNSTGRVYLTHT-IVG-----GLYMLRFAV---GASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       435 ~~~~~~~l~~~l~~~g~~~~~~~-~~~-----g~~~lRi~~---~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                          .++....|.+.|+.+=..+ +++     ....+|+..   +.-...++|++++.+.|.++...
T Consensus       328 ----Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~  390 (413)
T COG0112         328 ----GKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG  390 (413)
T ss_pred             ----HHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence                2223333334454331111 111     224589875   12234567888887777766543

>PRK08354 putative aminotransferase; Provisional

Probab=99.64  E-value=1.3e-13  Score=135.91  Aligned_cols=148  Identities=13%  Similarity=0.033  Sum_probs=107.0

Q ss_pred             HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC
Q 010842          134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA  213 (499)
Q Consensus       134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~  213 (499)
                      +++++++.+|.  .        .++|+|+++|+...+....            ++..|+++.++|+.+.++++.+|.   
T Consensus        45 l~~~ia~~~~~--~--------I~vt~G~~~al~~~~~~~~------------~gd~vlv~~P~y~~~~~~~~~~g~---   99 (311)
T PRK08354         45 LEEEFSKLFGE--P--------IVITAGITEALYLIGILAL------------RDRKVIIPRHTYGEYERVARFFAA---   99 (311)
T ss_pred             HHHHHHHHHCC--C--------EEECCCHHHHHHHHHHhhC------------CCCeEEEeCCCcHHHHHHHHHcCC---
Confidence            45568888873  2        4899999998765543221            456788899999999999999999   


Q ss_pred             CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEEeeccccchhc
Q 010842          214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSAC  290 (499)
Q Consensus       214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~  290 (499)
                      +++.+        .+|++.|++.+++ +      .+++.+.|+||||.+-+   +++|+++|+++|+|+++|.+|+.+..
T Consensus       100 ~~~~~--------~~d~~~l~~~~~~-~------~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~  164 (311)
T PRK08354        100 RIIKG--------PNDPEKLEELVER-N------SVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVK  164 (311)
T ss_pred             EEeec--------CCCHHHHHHhhcC-C------CEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccc
Confidence            88654        3578888887652 1      25788899999999955   67777888999999999999987643


Q ss_pred             cCccchhhhcCCCCCceeEecccccccCC-CcceEEEE
Q 010842          291 ICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWV  327 (499)
Q Consensus       291 ~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~  327 (499)
                      .. .  . ..  ..--.++.+..|.++.| .-+|+++.
T Consensus       165 ~~-~--~-~~--~~~vi~~~S~SK~~~l~GlRiG~~v~  196 (311)
T PRK08354        165 KP-E--S-PE--GENIIKLRTFTKSYGLPGIRVGYVKG  196 (311)
T ss_pred             cc-c--c-cC--CCcEEEEeccHhhcCCccceeeeeee
Confidence            21 1  1 00  11224556789999855 55788776

>PLN02624 ornithine-delta-aminotransferase

Probab=99.64  E-value=7.9e-13  Score=137.16  Aligned_cols=307  Identities=11%  Similarity=0.046  Sum_probs=171.5

Q ss_pred             HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCC
Q 010842          131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGV  210 (499)
Q Consensus       131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~  210 (499)
                      ..++.+.|++++|++.         .+++++|++||..|+..||.......+..+.+..+|.....-|-...-+..+.|-
T Consensus       119 ~~~la~~L~~~~~~~~---------~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~  189 (474)
T PLN02624        119 FPEFAEYLTSMFGYDM---------VLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCD  189 (474)
T ss_pred             HHHHHHHHHhhcCCCe---------EEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCC
Confidence            3334455777777654         3889999999999999998742211000000122344444445443333332221


Q ss_pred             -------C--CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCC
Q 010842          211 -------S--PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGI  277 (499)
Q Consensus       211 -------g--~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~  277 (499)
                             +  ...+..+|.       -|++.|++.++.   .+..+.+|++....+++|.+-|    |++|.++|++||+
T Consensus       190 ~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~---~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gi  259 (474)
T PLN02624        190 NEATRGFGPLLPGHLKVDF-------GDLDALEKIFEE---DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNV  259 (474)
T ss_pred             ccccccCCCCCCCceEeCC-------CCHHHHHHHHHh---CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence                   0  012233332       278999988863   2334567888888889999877    9999999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      ++++|++|.|+......+.....++ ..|.++++  |.++.+ ..+|.++.+++ .+ ..+..   .....         
T Consensus       260 llI~DEv~tG~GrtG~~~a~~~~~i-~pDiv~ls--K~lggG~~pigav~~~~~-i~-~~~~~---~~~~~---------  322 (474)
T PLN02624        260 LMIADEIQTGLARTGKMLACDWEEV-RPDVVILG--KALGGGVIPVSAVLADKD-VM-LCIKP---GEHGS---------  322 (474)
T ss_pred             EEEEeccccCcCcCcchhhHHhcCC-CCCEEEec--ccccCCCCcceeeeecHH-HH-hHhcc---CCcCC---------
Confidence            9999999986432111111112233 37888874  888766 46788777542 22 22211   00000         


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEEcCCCceEEEEEecCCCCCC
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPR-FEIVVPRHFALVCFRLNPYPHSG  431 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~-~~~~~~~~~~~v~f~~~~~~~~~  431 (499)
                          +. ++.+......-+++..+..+   ++.++..++.+++.+.|++    .|. +.-+ .+...++.+.+.... . 
T Consensus       323 ----T~-~g~pl~~aaa~aaLe~l~~~---~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~v-rg~G~~~~i~l~~~~-~-  391 (474)
T PLN02624        323 ----TF-GGNPLASAVAMAALQVVQDE---KLAERSAKLGQELRDQLQKIQKQFPKLIKEV-RGRGLLNAVVLNSPK-L-  391 (474)
T ss_pred             ----CC-CCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-EeeEEEEEEEecCCC-c-
Confidence                00 11121222333334433222   2344455556666665554    332 2212 223334444443211 0 


Q ss_pred             cchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          432 SADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       432 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                         ......++.+.|.++|..+ .+.   +..++|+++ +..+|++||+++++.|.++.+.
T Consensus       392 ---~~~~a~~~~~~L~e~GV~v-~p~---~~~~lR~~p-~l~~t~e~id~~l~~L~~~l~~  444 (474)
T PLN02624        392 ---GPVSAYDVCLKLKERGLLA-KPT---HDTIIRLAP-PLSISEDELQECSKALSDVLEH  444 (474)
T ss_pred             ---ChHHHHHHHHHHHhCCeEE-ecC---CCCEEEEEC-CccCCHHHHHHHHHHHHHHHHH
Confidence               0123467778888888543 332   346799998 4779999999999999887654

>PRK07049 methionine gamma-lyase; Validated

Probab=99.64  E-value=1.8e-13  Score=139.98  Aligned_cols=225  Identities=18%  Similarity=0.170  Sum_probs=156.8

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|....+|+.    ++++.|.+.         .++++||+.|+..++.+..+           ++..|+++...+..+.
T Consensus        81 ~~Pt~~~Le~~----lA~leg~~~---------~iv~~sG~~Ai~~~l~al~~-----------~Gd~Vv~~~p~Y~~~~  136 (427)
T PRK07049         81 NHPNSEIVEDR----LAVYEGAES---------AALFSSGMSAIATTLLAFVR-----------PGDVILHSQPLYGGTE  136 (427)
T ss_pred             CCcCHHHHHHH----HHHHhCCCc---------EEEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCCcccHH
Confidence            34666778877    888888654         38999999987777766543           5667888888887776


Q ss_pred             HHH----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH----
Q 010842          203 KVC----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE----  274 (499)
Q Consensus       203 ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~----  274 (499)
                      ..+    ...|+   +++.++ +     ..|+++|++.+.+..+. ..+.+|++..++||+|.+-|+++|.++|++    
T Consensus       137 ~~~~~~l~~~Gi---~~v~~~-~-----~~d~~~l~~~l~~~~~~-~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~  206 (427)
T PRK07049        137 TLLAKTFRNFGV---GAVGFA-D-----GLSEAAIGAAAEAAAAK-GRVSLILIETPANPTNSLVDVAAVRRVADAIEAR  206 (427)
T ss_pred             HHHHHHHHhcCc---EEEEEe-C-----CCCHHHHHHHHHhhccC-CCceEEEEECCCCCCCcccCHHHHHHHHHHhhhc
Confidence            553    45677   766665 1     35788898888654321 134578888999999999999999999988    


Q ss_pred             --hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC--CcceEEEEeCchhHHHhhcCCccCCCCCCCC
Q 010842          275 --YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY--LDCCCLWVKQPGLLVKALSTDPEYLKNKPSE  350 (499)
Q Consensus       275 --~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p--~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~  350 (499)
                        ++++++||.+|.......    .+..   .+|.++.+..|++++.  .-+|++.. +++.. +.+......       
T Consensus       207 ~~~~~~vvvDety~~~~~~~----pl~~---g~divv~S~SK~~gG~~glr~G~vv~-~~~l~-~~l~~~~~~-------  270 (427)
T PRK07049        207 QGHRPIIACDNTLLGPVFQK----PLEH---GADLSVYSLTKYVGGHSDLVAGAVLG-RKALI-RQVRALRSA-------  270 (427)
T ss_pred             ccCCCEEEEECCccccccCC----cccc---CCCEEEEcCceeecCCCCcEEEEEEC-CHHHH-HHHHHHHHh-------
Confidence              899999999987653221    1111   3799999999999853  33566553 33322 222111111       


Q ss_pred             CCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          351 SNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       351 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                                   .+........|+.++.+  +.+..++++..++++.+.+.|+++|+++-+
T Consensus       271 -------------~g~~ls~~~a~l~~r~L--~tl~~R~~~~~~~a~~la~~L~~~p~V~~v  317 (427)
T PRK07049        271 -------------IGTQLDPHSCWMLGRSL--ETLVLRMERANRNARAVAEFLRDHPKVEKL  317 (427)
T ss_pred             -------------cCCCCCHHHHHHHHcCC--ChHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence                         11122356677777665  567888999999999999999999987643

>PRK12462 phosphoserine aminotransferase; Provisional

Probab=99.64  E-value=6.5e-14  Score=138.03  Aligned_cols=338  Identities=14%  Similarity=-0.001  Sum_probs=206.9

Q ss_pred             ccccCCCCCChH-HHHHHHHHHHcccCCc------ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHH
Q 010842           92 FFAFFPATVSTA-GFLGEMLCACFNSVGF------NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSD  164 (499)
Q Consensus        92 ~~~~~~~~~~~~-~~~~~~l~~~~n~~~~------~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~  164 (499)
                      -+.|.|++...| .++.++-.+.+|.+..      ..-.+|...++-+++.+.|.++++.|+++     .--++++|||.
T Consensus         5 ~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y-----~Vlfl~GggT~   79 (364)
T PRK12462          5 QLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEY-----GVVFLQGGSSL   79 (364)
T ss_pred             cceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCC-----eEEEEeccHHH
Confidence            456777776655 5555555566664331      11245778888899999999999997653     11256667887


Q ss_pred             HHHHHHHHHHHHHHhHhhhhccCCe-EE-EcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCC--CccCHHHHHHHHH
Q 010842          165 SILVTLIAARDRALDAVGAENMHKL-VV-YGSDQTHST--FAKVCKLAGVSPANIRALPTSVDAN--FSLSPQLLRRAVE  238 (499)
Q Consensus       165 A~~~al~~ar~~~~~~~~~~g~~~~-~i-~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~--~~~d~~~L~~~i~  238 (499)
                      +.-++++....           ++. ++ ++. ..+++  +.+-++.+|    ++..+...+..+  .-.+++.++  +.
T Consensus        80 ~~ea~~~Nll~-----------~g~~~~~~~~-tG~fg~r~~~ea~~~g----~v~~~~~~~~~~~~~~p~~~~~~--~~  141 (364)
T PRK12462         80 QFSMIPMNFSR-----------PGAAAPEYVT-TGYWSRKAIGEASRVA----AMRVVWDGAASGYRTLPSLAELD--WD  141 (364)
T ss_pred             HHHHHHHHcCC-----------CCCcEEEEEe-CCHHHHHHHHHHHhcC----CceEecCcCCCCCCcCCCHHHhc--cC
Confidence            65555443322           222 22 332 35544  444455444    233333211111  244566641  11


Q ss_pred             HHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccC
Q 010842          239 ADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLS  318 (499)
Q Consensus       239 ~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~  318 (499)
                      ++      +.+|..++..|.+|+..|     ++.+.++..++||+.-+.+...+        .+.+.|.+..+.+|.++ 
T Consensus       142 ~d------~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pi--------d~~~~dvi~agsQKnlg-  201 (364)
T PRK12462        142 AR------APFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPF--------DVEAYGMVYAHAQKNLG-  201 (364)
T ss_pred             CC------CcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCC--------ChHHccEEEeeccccCC-
Confidence            22      237999999999999986     33344689999998754432222        12346999999999999 


Q ss_pred             CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHH--HHHHHHHHHHHH
Q 010842          319 YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVL--NLQSHIRSDIRL  395 (499)
Q Consensus       319 p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~--g~~~~~~~~~~~  395 (499)
                      |.|.++++++++.. .+.-...+.|+.-...     .+  ..+...+.+- ....+-.+++.+-.+  |++.+.+++.+.
T Consensus       202 P~Gltvvivs~~al-~~~~~~~p~~ldy~~~-----~~--~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~k  273 (364)
T PRK12462        202 PAGVTVAIIRRALL-ERVPDTLPPMLDFRTH-----VE--HRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARK  273 (364)
T ss_pred             CCceEEEEECHHHH-hhccccCCchhhHHHH-----Hh--cCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence            88999999988653 2222222333321100     00  0000011110 112333455555566  999999999999


Q ss_pred             HHHHHHHHhcCCCeEEEc-C---CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccC
Q 010842          396 AKMFEGFVKSDPRFEIVV-P---RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGA  471 (499)
Q Consensus       396 a~~l~~~L~~~~~~~~~~-~---~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~  471 (499)
                      ++.+++.|.+.++|.... .   .....|+|++.+         ..+.+++.+...++|.+-+.+...  .+.+|+|+- 
T Consensus       274 a~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~---------~~l~~~f~~~a~~~gl~~lkGhr~--vgg~Ras~y-  341 (364)
T PRK12462        274 AAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQ---------PRLDTLFKEQSTEAGFCGLSGHRS--IGGIRASLY-  341 (364)
T ss_pred             HHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCC---------HHHHHHHHHHHHHCCCccccCCcc--cCceEEEcC-
Confidence            999999999998665432 1   234568888754         356788889999999665544322  344999995 


Q ss_pred             CCCcHHHHHHHHHHHHHHHHH
Q 010842          472 SLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       472 ~~~t~~di~~l~~~l~~~~~~  492 (499)
                      ..++.++++.|++-++++.++
T Consensus       342 na~~~e~v~~L~~fm~~f~~~  362 (364)
T PRK12462        342 NAVSEQAVSRLCAFLKDFAIR  362 (364)
T ss_pred             CCCCHHHHHHHHHHHHHHHHh
Confidence            678999999999999988664

>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase

Probab=99.64  E-value=3.4e-13  Score=137.81  Aligned_cols=302  Identities=15%  Similarity=0.085  Sum_probs=182.6

Q ss_pred             ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842          120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS  199 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~  199 (499)
                      .|...++...+.+++.+++.+. +.+.+       ..++|+|+++++.. +.....           ++..|+++.+++.
T Consensus        70 ~Y~p~~g~~~lr~aia~~~~~~-~~~~d-------~I~it~Ga~~al~~-l~~l~~-----------~gd~Vlv~~P~y~  129 (402)
T TIGR03542        70 GYGPEQGYPFLREAIAENDYRG-RIDPE-------EIFISDGAKCDVFR-LQSLFG-----------SDNTVAVQDPVYP  129 (402)
T ss_pred             CCCCCCCCHHHHHHHHHHHHhc-CCCHH-------HEEECCCcHHHHHH-HHHhcC-----------CCCEEEEeCCCCc
Confidence            4555567788888877765332 45443       46888888887765 322211           4556888999999


Q ss_pred             hHHHHHHHhCC-CC-------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHH
Q 010842          200 TFAKVCKLAGV-SP-------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPL  268 (499)
Q Consensus       200 s~~ka~~~~G~-g~-------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I  268 (499)
                      .+...++..|+ |.       ..++.||+++++++..|+...     +      .+.+|+++.++||||.+-+   +++|
T Consensus       130 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----~------~~~~i~l~nP~NPTG~~~s~~~~~~l  198 (402)
T TIGR03542       130 AYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEE-----P------KIDIIYLCSPNNPTGTVLTKEQLKEL  198 (402)
T ss_pred             chHHHHHHcCCccccccccccceEEEeecchhhCCCCCcccc-----C------CceEEEEeCCCCCCCccCCHHHHHHH
Confidence            99999998887 11       156677876544455554211     1      2346777899999999966   8889


Q ss_pred             HHHHHHhCCEEEeeccccchhccCccchhhhcCCCC---CceeEecccccccCC-CcceEEEEeCchhH-------HHhh
Q 010842          269 AEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIER---VDSFSFSPHKWLLSY-LDCCCLWVKQPGLL-------VKAL  337 (499)
Q Consensus       269 ~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~---aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l-------~~~~  337 (499)
                      +++|++|++++++|.+|+.+..- +.....+..+..   --.++.+..|.++.| ..+|+++.... ..       ...+
T Consensus       199 ~~~a~~~~~~iI~De~y~~~~~~-~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~-l~~~~~~~~~~~~  276 (402)
T TIGR03542       199 VDYANEHGSLILFDAAYSAFISD-PSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKE-LTYADGHSVIQDW  276 (402)
T ss_pred             HHHHHHcCeEEEEEchhhhhccC-CCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHH-HhhcchhhHHHHH
Confidence            99999999999999999865421 111111111211   124467889999755 66888887543 11       0110


Q ss_pred             -cC-CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          338 -ST-DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG---VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       338 -~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                       .. ...+.                      ....+...++...+.   ...+++..+...+.++++.+.|++. ++++.
T Consensus       277 ~~~~~~~~~----------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~  333 (402)
T TIGR03542       277 ERRQCTKFN----------------------GASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA-GFKVY  333 (402)
T ss_pred             HHHhhhccc----------------------CCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-Cceec
Confidence             00 00000                      011233333333332   2334555666677778888889876 67765


Q ss_pred             cCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          413 VPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       413 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      .+...+.+++++.+.-       +  ..++.+.+.+ .|..+..+..+.  +..++|+++.   .++++++..++.|+++
T Consensus       334 ~~~~~~f~~v~l~~~~-------~--~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~---~~~~~l~~~l~~l~~~  401 (402)
T TIGR03542       334 GGEHAPYLWVKTPEGI-------S--SWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAF---GKRENIVEACERIKEA  401 (402)
T ss_pred             CCCceeEEEEECCCCC-------C--HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHhh
Confidence            4344556666664311       1  2456677664 465544443332  3578999974   2678899999888764

This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).

>PRK03715 argD acetylornithine transaminase protein; Provisional

Probab=99.63  E-value=3.8e-13  Score=136.43  Aligned_cols=308  Identities=11%  Similarity=0.032  Sum_probs=180.4

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~  206 (499)
                      ..+.+.++.+++++..+.+.         .++++|||+||..|+..+|......  ..+ ++.+|......|-+..-++.
T Consensus        76 ~~~~~~~la~~l~~~~~~~~---------v~f~~SGseA~e~Aik~ar~~~~~~--~~~-r~~ii~~~~~yHG~t~~~~~  143 (395)
T PRK03715         76 YNEPMAKLAGLLTQHSCFDK---------VFFANSGAEANEGAIKLARKWGRKH--KNG-AYEIITFDHSFHGRTLATMS  143 (395)
T ss_pred             cCHHHHHHHHHHhhccCCCE---------EEEeCCcHHHHHHHHHHHHHHhhcc--CCC-CcEEEEECCCcCCChHHHHh
Confidence            35677777777777654432         4999999999999999998642110  001 23455556667888777777


Q ss_pred             HhCCCCCCeEEeeCCCCCCC----ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCE
Q 010842          207 LAGVSPANIRALPTSVDANF----SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIW  278 (499)
Q Consensus       207 ~~G~g~~~v~~v~~~~~~~~----~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~  278 (499)
                      ..|...-.....|...  .+    ..|+++|++.+.+.      ..+|++.......|.+-|    +++|.++|++||++
T Consensus       144 ~s~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~l~~~------~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~l  215 (395)
T PRK03715        144 ASGKPGWDTIFAPQVP--GFPKAELNDIASVEKLITDK------TVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLL  215 (395)
T ss_pred             hcCCcccccCCCCCCC--CceeeCCchHHHHHHHcCCC------ceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence            6654110111111111  01    24788998888532      346777766777788776    99999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK  358 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  358 (499)
                      +++|+++.|+.....-+.....++ ..|.++++  |.++..+..|.++.+++-.   .+  .+.....            
T Consensus       216 lI~DEv~tG~GRtG~~~a~~~~gv-~PDi~t~g--K~lg~G~p~~av~~~~~i~---~~--~~~~~~~------------  275 (395)
T PRK03715        216 LIVDEVQTGCGRTGTLFAYELSGI-EPDIMTLG--KGIGGGVPLAALLAKAEVA---VF--EAGDQGG------------  275 (395)
T ss_pred             EEEeccccCCCCCcchhhHhhcCC-CCceeeeh--hhhhCCcceEEEEEccccc---cc--cCCCcCC------------
Confidence            999999987422211111112344 37888774  8887666788888766421   11  1111000            


Q ss_pred             CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEcCCCceEEEEEecCCCCCCcchh
Q 010842          359 DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD---PRFEIVVPRHFALVCFRLNPYPHSGSADT  435 (499)
Q Consensus       359 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~~  435 (499)
                        |. .+.+..+....+++..+..   ++..++..++.++|.+.|+++   .++.-+ .....++.+.+....       
T Consensus       276 --T~-~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~v-rG~Glm~~i~l~~~~-------  341 (395)
T PRK03715        276 --TY-NGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEGE-RGEGLLRALLLGKDI-------  341 (395)
T ss_pred             --CC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCeE-EcceeEEEEEecCch-------
Confidence              11 1222223334444554432   346777788888888888753   123212 123344555553311       


Q ss_pred             HHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          436 EMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       436 ~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .....+...++.++|..+ ...   +...+|+++ +..+|++||+.++++|.++.+++
T Consensus       342 ~~~~~~~~~~~~~~Gi~~-~~~---~~~~lR~~p-~l~~t~~ei~~~~~~l~~~l~~~  394 (395)
T PRK03715        342 GPQIVEKARDMQPDGLLL-NAP---RPNLLRFMP-ALNVTTEEIDQMIAMLRSVLDKL  394 (395)
T ss_pred             HHHHHHHHHhccCCCEEE-eec---CCCEEEEeC-CcccCHHHHHHHHHHHHHHHHhh
Confidence            111122223333448443 221   225699999 48899999999999999988764

>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional

Probab=99.62  E-value=3.9e-13  Score=137.35  Aligned_cols=302  Identities=13%  Similarity=0.077  Sum_probs=174.2

Q ss_pred             HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCC-eEEEcCCCCchhHHHHHHHhCCC
Q 010842          133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHK-LVVYGSDQTHSTFAKVCKLAGVS  211 (499)
Q Consensus       133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~-~~i~~s~~~H~s~~ka~~~~G~g  211 (499)
                      ++.+.|+++++.+.         .++++|||+||..|+..||......   .+.++ .++......|-+..-+..+.|..
T Consensus        85 ~la~~l~~~~~~~~---------v~~~~sGseA~e~Alk~ar~~~~~~---~~~~r~~ii~~~~~yHG~t~~~~~~~~~~  152 (406)
T PRK12381         85 RLAKKLIDATFADR---------VFFCNSGAEANEAALKLARKYAHDR---YGSHKSGIVAFKNAFHGRTLFTVSAGGQP  152 (406)
T ss_pred             HHHHHHHhhCCCCe---------EEEcCCcHHHHHHHHHHHHHHHhhc---CCCCCCeEEEECCCcCCcchhHHhhcCCc
Confidence            34445777776532         3899999999999999998653211   01122 33444555676665444444420


Q ss_pred             C---------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc-----cCChhHHHHHHHHhCC
Q 010842          212 P---------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA-----VDNVEPLAEVANEYGI  277 (499)
Q Consensus       212 ~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~-----id~l~~I~~ia~~~~~  277 (499)
                      .         ..+..+|       ..|+++|++.+.++      +.+|++. |.+++|.     .+.+++|.++|++||+
T Consensus       153 ~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~------~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~  218 (406)
T PRK12381        153 KYSQDFAPLPPDIRHAA-------YNDLNSASALIDDQ------TCAVIVE-PIQGEGGVIPADKAFLQGLRELCDRHNA  218 (406)
T ss_pred             ccccCCCCCCCCeeEeC-------CCCHHHHHHhccCC------eeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence            0         0122222       23789999888542      3345554 5566664     3668999999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF  357 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  357 (499)
                      ++++|.+|.|+.....-+.....++. .|.+++  -|.++..+..|.++.+++  +.+.+...   ....          
T Consensus       219 llI~DEv~tG~gr~G~~~~~~~~~v~-pDi~t~--sK~l~gG~~ig~~~~~~~--~~~~~~~~---~~~~----------  280 (406)
T PRK12381        219 LLIFDEVQTGVGRTGELYAYMHYGVT-PDVLTT--AKALGGGFPIGAMLTTEK--CASVMTVG---THGT----------  280 (406)
T ss_pred             EEEEcchhhCCCCCcchhhhHhhCCC-CCEEEe--hhhhhCCCceEEEEEcHH--HHhhcCCC---CCCC----------
Confidence            99999999665322111111122332 676555  598875567888887643  22333211   0000          


Q ss_pred             CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcCC--CceEEEEEecCCCCCCcch
Q 010842          358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVPR--HFALVCFRLNPYPHSGSAD  434 (499)
Q Consensus       358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~--~~~~v~f~~~~~~~~~~~~  434 (499)
                         +. .+.+.......++++.+.   -+++.++..++.+++.+.|+++. .+.++..+  ...++.+.+.+.       
T Consensus       281 ---t~-~~~pl~~aaa~a~l~~l~---~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~-------  346 (406)
T PRK12381        281 ---TY-GGNPLASAVAGKVLELIN---TPEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAE-------  346 (406)
T ss_pred             ---CC-CCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCc-------
Confidence               00 112222223333444432   22466777788888888887651 12222211  123334444331       


Q ss_pred             hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhccC
Q 010842          435 TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGS  497 (499)
Q Consensus       435 ~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~~  497 (499)
                      .......+.+.+.++|..+..    .+..++|+++. ...|++||++++++|.++.+++.++.
T Consensus       347 ~~~~~~~~~~~l~~~Gv~v~~----~g~~~lRl~p~-~~~t~~~i~~~~~~l~~~l~~~~~~~  404 (406)
T PRK12381        347 YAGKAKQISQEAAKAGVMVLI----AGPNVVRFAPA-LNISEEEITTGLDRFARACERFVSRG  404 (406)
T ss_pred             hhhHHHHHHHHHHHCCcEEee----CCCCEEEEeCC-ccCCHHHHHHHHHHHHHHHHHHHhcc
Confidence            012356778888889965432    13357999984 66899999999999999998886654

>PRK06959 putative threonine-phosphate decarboxylase; Provisional

Probab=99.62  E-value=4e-13  Score=133.85  Aligned_cols=277  Identities=13%  Similarity=0.006  Sum_probs=175.3

Q ss_pred             HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCC
Q 010842          132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVS  211 (499)
Q Consensus       132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g  211 (499)
                      .++++++++.+|.+..      ...++|+|+++++.. +..+..           ++. |++..+++..+..+++..|. 
T Consensus        56 ~~L~~~ia~~~~~~~~------~~I~i~~Gs~e~i~~-l~~~~~-----------~g~-v~v~~P~y~~y~~~~~~~g~-  115 (339)
T PRK06959         56 DGLAACAARYYGAPDA------AHVLPVAGSQAAIRA-LPALLP-----------RGR-VGIAPLAYSEYAPAFARHGH-  115 (339)
T ss_pred             HHHHHHHHHHhCCCCc------ccEEECcCHHHHHHH-HHHhcC-----------CCe-EEEcCCCcHHHHHHHHHCCC-
Confidence            4566679999999642      135888888887653 322211           333 66688899999999999999 


Q ss_pred             CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHH---HHHHhCCEEEeeccccch
Q 010842          212 PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAE---VANEYGIWVHVDAAYAGS  288 (499)
Q Consensus       212 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~---ia~~~~~~lhvD~A~g~~  288 (499)
                        +++.||.+.        +.+.+    ..      .+++.+.|+||||.+-+.+++.+   .|++++.|+++|.+|..+
T Consensus       116 --~~~~v~~~~--------~~~~~----~~------~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~  175 (339)
T PRK06959        116 --RVVPLDEAA--------DTLPA----AL------THLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADT  175 (339)
T ss_pred             --EEEeecccc--------hhccc----cC------CEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccC
Confidence              888887652        12211    11      16888889999999966655555   466789999999999875


Q ss_pred             hccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCC
Q 010842          289 ACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGR  366 (499)
Q Consensus       289 ~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr  366 (499)
                      ... +...... .... -.+..+..|.++.| .-+|+++.. ++.. +.+.. ...+-                      
T Consensus       176 ~~~-~s~~~~~-~~~~-vi~l~SfSK~~gl~GlRiGy~v~~-~~li-~~l~~~~~~~~----------------------  228 (339)
T PRK06959        176 LPA-ASLAAHT-DRPG-LVVLRSVGKFFGLAGVRAGFVLAA-PALL-AALRDALGAWT----------------------  228 (339)
T ss_pred             CCc-ccchhcc-CCCC-EEEEecChhhcCCcchheEEEecC-HHHH-HHHHHhcCCCC----------------------
Confidence            321 1111111 1111 15667889999755 668888764 3333 22221 11110                      


Q ss_pred             CCCcHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHH
Q 010842          367 RFKSLRLWMVLRSYGV-LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDW  445 (499)
Q Consensus       367 ~~~al~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~  445 (499)
                       ...+...++...+.. +..++..++..+.++++.+.|++. ++++.  +..+.+.++..  .          ..++.+.
T Consensus       229 -vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~f~~~~~~--~----------~~~l~~~  292 (339)
T PRK06959        229 -VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH-GFAVH--ATPLFSWTDDP--R----------AAALHAA  292 (339)
T ss_pred             -CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcc--CcceEEEEeCC--C----------HHHHHHH
Confidence             123344444444432 345566677777888999999887 67654  22233334432  1          3567888


Q ss_pred             HHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhccC
Q 010842          446 VNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGS  497 (499)
Q Consensus       446 l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~~  497 (499)
                      |.++|+.+ ..  +....++|+++.   .+.++.++++++|+++.+.+...+
T Consensus       293 l~~~GI~v-r~--~~~~~~lRisi~---~~~~e~~~l~~al~~~~~~~~~~~  338 (339)
T PRK06959        293 LARRGIWT-RY--FAPPPSVRFGLP---ADEAEWQRLEDALAECVPTLAAAS  338 (339)
T ss_pred             HHhCCeEE-EE--CCCCCeEEEECC---CCHHHHHHHHHHHHHHHHHHhhcc
Confidence            88888654 32  233458999984   367899999999999988876654

>PRK05664 threonine-phosphate decarboxylase; Reviewed

Probab=99.60  E-value=6.4e-13  Score=132.07  Aligned_cols=268  Identities=12%  Similarity=0.070  Sum_probs=168.6

Q ss_pred             HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC
Q 010842          134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA  213 (499)
Q Consensus       134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~  213 (499)
                      +++.+++.+|.+ .        .++|+|+++++...+.+  .           ++..|++..+++..+...++.+|+   
T Consensus        54 Lr~~ia~~~~~~-~--------I~it~Gs~~al~~~~~~--~-----------~gd~v~v~~P~y~~~~~~~~~~g~---  108 (330)
T PRK05664         54 LEAAARAYYGAP-Q--------LLPVAGSQAAIQALPRL--R-----------APGRVGVLSPCYAEHAHAWRRAGH---  108 (330)
T ss_pred             HHHHHHHHhCCC-C--------EEECcCHHHHHHHHHHc--c-----------CCCEEEEcCCChHHHHHHHHHcCC---
Confidence            344577878753 2        58899999987665321  1           566788999999999999999999   


Q ss_pred             CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEEeeccccchhc
Q 010842          214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSAC  290 (499)
Q Consensus       214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~  290 (499)
                      +++.||.+          ++++.++ ++      .+++.+.|+||||.+-+   +++|+++|+++++++++|.+|..+.-
T Consensus       109 ~~~~v~~~----------~~~~~~~-~~------~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~  171 (330)
T PRK05664        109 QVRELDEA----------EVEAALD-SL------DVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTP  171 (330)
T ss_pred             eEEEechh----------hHhhhhc-CC------CEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCC
Confidence            99888763          3444442 22      25778899999999955   56666778899999999999965421


Q ss_pred             cCccchhhhcCCCCCc-eeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842          291 ICPEFRHYLNGIERVD-SFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGRR  367 (499)
Q Consensus       291 ~~~~~~~~~~g~~~aD-si~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~  367 (499)
                       .+..... .  ..-. .++.+..|.++.| .-+|+++.. ++.. +.+.. ...+.                       
T Consensus       172 -~~s~~~~-~--~~~~vi~~~SfSK~~gl~GlRiG~~v~~-~~l~-~~~~~~~~~~~-----------------------  222 (330)
T PRK05664        172 -QHSLAAC-A--HRPGLIVLRSFGKFFGLAGARLGFVLAE-PALL-RALAELLGPWT-----------------------  222 (330)
T ss_pred             -ccccccc-c--cCCCEEEEeeccccccCCCcceEEEEeC-HHHH-HHHHHhcCCCC-----------------------
Confidence             1111111 1  1112 5677889999744 668888874 3332 22221 11110                       


Q ss_pred             CCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHH
Q 010842          368 FKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWV  446 (499)
Q Consensus       368 ~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l  446 (499)
                      ...+..+++...+. ....++..++..+.++++.+.|++. +++.. ....+.+.++. + .          ...+.+.|
T Consensus       223 ~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~-~~~~~f~~~~~-~-~----------~~~~~~~l  288 (330)
T PRK05664        223 VSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH-GLTPA-GGCALFQWVRT-E-D----------AAALHEFL  288 (330)
T ss_pred             CCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCcceEEEEec-C-C----------HHHHHHHH
Confidence            01233333333332 2334556667777788899999887 55321 12223333333 2 1          35677778


Q ss_pred             HhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          447 NSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       447 ~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      .++|+.+..   +....++|++++   .+.++.++++++|+++.++
T Consensus       289 ~~~gi~v~~---f~~~~~iRis~~---~~~~~~~~l~~al~~~~~~  328 (330)
T PRK05664        289 ARRGILTRL---FEQPASLRFGLP---ADEADWARLDQALLAYRKE  328 (330)
T ss_pred             HHCCeEEEE---CCCCCeEEEECC---CCHHHHHHHHHHHHHHHhh
Confidence            888865532   334468999986   2678899999999877554

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=99.60  E-value=1.7e-13  Score=137.24  Aligned_cols=327  Identities=15%  Similarity=0.154  Sum_probs=213.3

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCCchh
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHST  200 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~H~s  200 (499)
                      ++..+..++-.++..|||++.|++.-.        +-.++|..+-..+|.+.|.....+    |. .+-+++++..+|-.
T Consensus       575 eQaqGY~~lf~~Le~~Lc~iTG~D~~s--------~QPNsGA~GEYaGL~~IRaY~~~k----ge~hRnvClIPvSAHGT  642 (1001)
T KOG2040|consen  575 EQAQGYQQLFTELEKDLCEITGFDSFS--------LQPNSGAQGEYAGLRVIRAYLESK----GEGHRNVCLIPVSAHGT  642 (1001)
T ss_pred             HHHhhHHHHHHHHHHHhheeeccccee--------ecCCCCcccchhhHHHHHHHHHhc----cCCcceeEEEeecccCC
Confidence            445667788888889999999997631        334456666667777766554332    22 35677888889999


Q ss_pred             HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC-hhHHHHHHHHhCCEE
Q 010842          201 FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN-VEPLAEVANEYGIWV  279 (499)
Q Consensus       201 ~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~-l~~I~~ia~~~~~~l  279 (499)
                      -...+.+.|+   .|+.|.++.+|  .+|+.+|+++.++...+   -.++.+|.++| .|.+++ +++++++.|+||--+
T Consensus       643 NPASA~Magm---kvvpV~~~~~G--~id~~dLk~kaekh~~~---Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQV  713 (1001)
T KOG2040|consen  643 NPASAAMAGM---KVVPVGCDANG--NIDMVDLKAKAEKHKDN---LAALMVTYPST-HGVFEEGIDDICDIIHEHGGQV  713 (1001)
T ss_pred             ChhhHHhcCC---EEEEeeccCCC--CccHHHHHHHHHHhhhh---hheeEEecccc-cccccccHHHHHHHHHhcCCEE
Confidence            9999999999   99999998766  99999999998876542   24788899988 688854 999999999999999


Q ss_pred             Eeeccccchhc-cCccchhhhcCCCCCceeEecccccccCCCcce-----EEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842          280 HVDAAYAGSAC-ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCC-----CLWVKQPGLLVKALSTDPEYLKNKPSESNS  353 (499)
Q Consensus       280 hvD~A~g~~~~-~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g-----~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~  353 (499)
                      ..|||---... ++      ..|--++|+.-.+.||.++.|-|.|     -+.|+..  +       ++||.+...-...
T Consensus       714 YlDGANMNAqVGlc------~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~H--L-------apfLP~HpVvs~~  778 (1001)
T KOG2040|consen  714 YLDGANMNAQVGLC------RPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--L-------APFLPSHPVVSPG  778 (1001)
T ss_pred             EecCCCccceeccc------CCccccccceeecccceeeecCCCCCCCCCccchhhh--c-------cccCCCCCccCCC
Confidence            99998532211 11      1133359999999999998885544     4444431  2       3444432211000


Q ss_pred             -cccCCCcccCCCCCCC-c--H-HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEE----EEe
Q 010842          354 -VVDFKDWQVGTGRRFK-S--L-RLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVC----FRL  424 (499)
Q Consensus       354 -~~~~~~~~~~~sr~~~-a--l-~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~----f~~  424 (499)
                       ..+-...+.-.+.+++ +  | --|+.++.+|..|++..-+-.+-+|+|+.++|+.+  ++++.....+.+.    +..
T Consensus       779 ~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~~~~vaHEFIlD~  856 (1001)
T KOG2040|consen  779 RPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKILFRGENGLVAHEFILDL  856 (1001)
T ss_pred             CCCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--cceeEecCCcceeeeeeeec
Confidence             0000011111122232 2  3 35999999999999999999999999999999975  5555332222332    222


Q ss_pred             cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee-ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI-VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ++-......+    ...+.++|..-|  |-.|+. |--.+.+-|-.+ ..-+++++|++++++..+.+++
T Consensus       857 r~fK~~agie----avDvAKRL~DYg--FHaPTmswPV~gtLMIEPT-ESE~k~ElDRfcdAliSIreEI  919 (1001)
T KOG2040|consen  857 RPFKKTAGIE----AVDVAKRLMDYG--FHAPTMSWPVAGTLMIEPT-ESEDKAELDRFCDALISIREEI  919 (1001)
T ss_pred             hhhccccCCc----HHHHHHHHHhcc--CCCCccccccCCceEeccC-ccccHHHHHHHHHHHHHHHHHH
Confidence            3321101111    234556666657  444432 222344555554 6678899999999997777665

>COG3844 Kynureninase [Amino acid transport and metabolism]

Probab=99.59  E-value=5.5e-13  Score=124.04  Aligned_cols=315  Identities=16%  Similarity=0.099  Sum_probs=213.8

Q ss_pred             hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc-----h
Q 010842          125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH-----S  199 (499)
Q Consensus       125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H-----~  199 (499)
                      +....+-..+.+.++.++|.....        ++..++|..|+.-++++--+..        .+-.|++|+...     |
T Consensus        72 ~~W~~lp~~lgdklApLiGA~~~E--------vvv~dtts~nl~k~L~aalr~~--------~~r~vIv~E~~~fpTdly  135 (407)
T COG3844          72 ADWFDLPERLGDKLAPLIGARAGE--------VVVTDTTSINLFKVLAAALRPQ--------EGRRVIVSEGDNFPTDLY  135 (407)
T ss_pred             CchhhchhHHHHHhhhhhcCCCCc--------eEEeCCcchHHHHHHHHHhccC--------CCceEEeecCCCCCcchh
Confidence            344566677888899999997653        4444445566655554432211        233455565443     3


Q ss_pred             hHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842          200 TFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV  279 (499)
Q Consensus       200 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l  279 (499)
                      -.+..+.++|.|.        +-.  ..+.+++++++++++++      +|+.++.+.-||..-++.+|..++|++|+.+
T Consensus       136 ~a~g~~~~~~~~~--------~~~--~~~~P~~~~~~~~dd~A------vV~L~~V~y~TGql~dm~aiT~~AH~~galv  199 (407)
T COG3844         136 IAEGLADLLGIGY--------DLE--GVIAPRALEEAITDDVA------VVLLSHVNYKTGQLLDMRAITALAHQHGALV  199 (407)
T ss_pred             hhcchhhhhcccc--------cce--eeeChHHHHHhhccceE------EEEeccccccccceeeHHHHHHHHHhcCceE
Confidence            3455677788742        111  26788899999999876      8899999999999999999999999999999


Q ss_pred             EeeccccchhccCccchhhhcCCCCCceeEeccccccc-CCCcceEEEEeCchhHHHhhcCCccCCCCCCCCC-CC--cc
Q 010842          280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSES-NS--VV  355 (499)
Q Consensus       280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~-~~--~~  355 (499)
                      .-|=||+.+.+..+-+.      .++|+-+++.||+|+ +|.+.+++++.++.. .........++....... ..  ..
T Consensus       200 ~wDLAHsaGavp~~Lh~------~gaDfaigcsyKYLNgGPGapa~l~v~~~h~-e~~~~~lsgW~gha~pf~m~~~y~p  272 (407)
T COG3844         200 GWDLAHSAGAVPVDLHA------AGADFAIGCSYKYLNGGPGAPAGLFVAPRHR-ERSWPPLSGWWGHARPFAMEEVYAP  272 (407)
T ss_pred             EeehhcccCCcceeecc------cCCCeeeeeeceeccCCCCCceeEEeccccc-cccccccccccCCCCcchhhhccCc
Confidence            99999998877654333      259999999999995 466678888866532 223333445554322100 00  00


Q ss_pred             cCCCcccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-C--CeEEEcC----CCceEEEEEecC
Q 010842          356 DFKDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD-P--RFEIVVP----RHFALVCFRLNP  426 (499)
Q Consensus       356 ~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~--~~~~~~~----~~~~~v~f~~~~  426 (499)
                      ..+-..+.+|...  ....+-.+|.....-++.+..++...++.++.+.++.. +  ++++..|    .....|+|..+.
T Consensus       273 ~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~  352 (407)
T COG3844         273 GPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPH  352 (407)
T ss_pred             CccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCc
Confidence            0111112222221  22345556777777779999999999999999999864 2  5777764    345678887653


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       427 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                                  ..++.+.|.++|.+    ..+.....+|+.++-.+++-+||=..++.|.++.+.+.
T Consensus       353 ------------~~~V~qaLi~rGVi----gD~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a  404 (407)
T COG3844         353 ------------GYQVMQALIDRGVI----GDFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLA  404 (407)
T ss_pred             ------------HHHHHHHHHHcCcc----ccccCCCeeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence                        46778888889953    23445578999998889999999999999999887653

>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.58  E-value=4.8e-12  Score=130.00  Aligned_cols=316  Identities=13%  Similarity=0.042  Sum_probs=175.6

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      ..+.++.+.|++++.-..+       ...|+++||||+..|+..||...... +..| ++.+|......|-...-+....
T Consensus        85 ~~~~~la~~l~~~~p~~~~-------~v~f~~sGseA~e~A~klar~~~~~~-~~~~-r~~ii~~~~~yHG~t~~~ls~~  155 (423)
T PRK05964         85 EPAERLAQRLVALTPGGLD-------HVFFSDSGSVAVEVALKMALQYWRNR-GEPG-RSRFLSLRGGYHGDTIGTMSVG  155 (423)
T ss_pred             HHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEEcCCcCCccHHHHhcC
Confidence            4445566668887631111       24899999999999999998753211 0001 2223444444555443333332


Q ss_pred             CCC---------CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEec-CCCccccc----CChhHHHHHHHH
Q 010842          209 GVS---------PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATV-GTTSTTAV----DNVEPLAEVANE  274 (499)
Q Consensus       209 G~g---------~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~-gtt~~G~i----d~l~~I~~ia~~  274 (499)
                      +-+         ...+..+|...+.....++++|++.+.+.   +..+.+|++.- .....|.+    +.+++|.++|++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~---~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~  232 (423)
T PRK05964        156 DRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKH---AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDR  232 (423)
T ss_pred             CCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC---CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHH
Confidence            210         01234455432110122377888877532   22344444433 24445655    339999999999


Q ss_pred             hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCC---ccCCCCCCCC
Q 010842          275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD---PEYLKNKPSE  350 (499)
Q Consensus       275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~---~~yl~~~~~~  350 (499)
                      ||+++++|+++.|+.....-+.....++ ..|.++++  |+++.+ +..|+++.+++  +.+.+...   ..++..    
T Consensus       233 ~g~llI~DEv~tg~gr~G~~~a~~~~~v-~pDi~~~~--K~l~gG~~p~~av~~~~~--i~~~~~~~~~~~~~~~~----  303 (423)
T PRK05964        233 HGVLLIFDEIATGFGRTGTLFACEQAGV-SPDIMCLS--KGLTGGYLPLAATLCTAE--IFEAFYSDDRAKAFMHS----  303 (423)
T ss_pred             cCCEEEEechhhCCCcCcchhHHHhcCC-CCCeeeee--hhhhcCcccceEEEEcHH--HHHhhhcCCcccccccC----
Confidence            9999999999976532211111112233 37877765  999776 56888776543  22333211   000100    


Q ss_pred             CCCcccCCCcccCCCCCCCcHHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc--CCCceEEEEEec
Q 010842          351 SNSVVDFKDWQVGTGRRFKSLRLWMV---LRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV--PRHFALVCFRLN  425 (499)
Q Consensus       351 ~~~~~~~~~~~~~~sr~~~al~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~v~f~~~  425 (499)
                                   .+-....+.+.++   ++.+..   +.+.++..++.+++.+.|+++.++..+.  .....++.+.+.
T Consensus       304 -------------~T~~~np~~~aaa~a~l~~l~~---~~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~  367 (423)
T PRK05964        304 -------------PSYTANPLACAAANASLDLFED---EPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELD  367 (423)
T ss_pred             -------------CCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEec
Confidence                         1111233443333   443322   2456777788888888877653332221  123344556664


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ...      .+.....+.+.|.++|.++ .+.   + ..+|++. +..+|++|||+++++++++.+++
T Consensus       368 ~~~------~~~~~~~l~~~l~~~Gv~v-~~~---~-~~lR~~p-~l~~t~edId~~v~~l~~al~~~  423 (423)
T PRK05964        368 RPV------LERDGPALRAFALERGVLL-RPL---G-NTIYLMP-PYIITAEELDRITDAIVEVADEL  423 (423)
T ss_pred             cCc------chhHHHHHHHHHHHCCeEE-Eec---C-CEEEEeC-CcccCHHHHHHHHHHHHHHHhhC
Confidence            321      0123567888888899544 321   1 4699998 47899999999999999988764

>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.58  E-value=1.1e-12  Score=129.73  Aligned_cols=289  Identities=18%  Similarity=0.209  Sum_probs=193.1

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF  201 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~  201 (499)
                      ...|-...+|+.    ++++=|...         ++.+++|..|+..++.+...           ++..|+++...+...
T Consensus        60 ~~nPT~~~lE~~----~a~LEg~~~---------~~afsSGmaAI~~~~l~ll~-----------~GD~vl~~~~~YG~t  115 (396)
T COG0626          60 TGNPTRDALEEA----LAELEGGED---------AFAFSSGMAAISTALLALLK-----------AGDHVLLPDDLYGGT  115 (396)
T ss_pred             CCCccHHHHHHH----HHHhhCCCc---------EEEecCcHHHHHHHHHHhcC-----------CCCEEEecCCccchH
Confidence            446777888888    777776554         48889998887777666543           466777777776553


Q ss_pred             H----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHH-HHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC
Q 010842          202 A----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEA-DVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG  276 (499)
Q Consensus       202 ~----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~-~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~  276 (499)
                      .    +....+|+   ++.+++.       .+.+++++++.+ +++      +|.+-.++||+.-+-||.+|+++|+++|
T Consensus       116 ~~~~~~~l~~~gi---~~~~~d~-------~~~~~~~~~~~~~~tk------~v~lEtPsNP~l~v~DI~~i~~~A~~~g  179 (396)
T COG0626         116 YRLFEKILQKFGV---EVTFVDP-------GDDEALEAAIKEPNTK------LVFLETPSNPLLEVPDIPAIARLAKAYG  179 (396)
T ss_pred             HHHHHHHHHhcCe---EEEEECC-------CChHHHHHHhcccCce------EEEEeCCCCcccccccHHHHHHHHHhcC
Confidence            3    33445677   7777653       255566766664 554      8999999999999999999999999999


Q ss_pred             CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842          277 IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV  354 (499)
Q Consensus       277 ~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  354 (499)
                      +.++||..|+...+.-    ++..|   ||.+.-+..|++++.-+  .|++..+++......+.....++          
T Consensus       180 ~~vvVDNTfatP~~q~----PL~~G---aDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~----------  242 (396)
T COG0626         180 ALVVVDNTFATPVLQR----PLELG---ADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANT----------  242 (396)
T ss_pred             CEEEEECCcccccccC----hhhcC---CCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhc----------
Confidence            9999999998875432    22233   99999999999988755  46555555543321111111111          


Q ss_pred             ccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CC----------------Cc
Q 010842          355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PR----------------HF  417 (499)
Q Consensus       355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~----------------~~  417 (499)
                                |--..+...|+.++-  .+.+.-+++++.++|..+.++|++.|.++-+. |.                ..
T Consensus       243 ----------G~~l~p~dA~l~lRG--lkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~g  310 (396)
T COG0626         243 ----------GAVLSPFDAWLLLRG--LRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYG  310 (396)
T ss_pred             ----------CCCCCHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCc
Confidence                      112235566877764  48889999999999999999999999987543 31                34


Q ss_pred             eEEEEEecCCCCCCcchhHHHHHHHHHHHHhc------CCE--EEE-ee--e---E-------C--CEEEEEEeccCCCC
Q 010842          418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNST------GRV--YLT-HT--I---V-------G--GLYMLRFAVGASLT  474 (499)
Q Consensus       418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~~--~~~-~~--~---~-------~--g~~~lRi~~~~~~~  474 (499)
                      ++++|.+...         +...++.+.|.--      |-+  .+. +.  .   .       .  ..+.+|++++    
T Consensus       311 g~~Sf~l~~~---------~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVG----  377 (396)
T COG0626         311 GLFSFELKNE---------EAAKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVG----  377 (396)
T ss_pred             eEEEEEeCCh---------HHHHHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEec----
Confidence            6788888651         2234455443211      110  011 10  0   0       0  2467999996    


Q ss_pred             cHHHHHHHHHHHHHHHHHH
Q 010842          475 DERHVVAAWELIMEGADRL  493 (499)
Q Consensus       475 t~~di~~l~~~l~~~~~~l  493 (499)
                       -||++.+++.|++..+.+
T Consensus       378 -lEd~eDLi~Dl~~Al~~~  395 (396)
T COG0626         378 -LEDVEDLIADLEQALAKA  395 (396)
T ss_pred             -CCCHHHHHHHHHHHHHhh
Confidence             467888888887776543

>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated

Probab=99.57  E-value=1.4e-11  Score=126.33  Aligned_cols=317  Identities=14%  Similarity=0.096  Sum_probs=173.0

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEE-cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVI-QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      ..+.++.+.|++++..+...    .....| ++||||||..|+..||...       | ++.+|.....-|-...-+...
T Consensus        82 ~~~~~lae~l~~~~~~~~~~----~~~~~f~~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~ls~  149 (425)
T PRK09264         82 TAKREFLETFEETILKPRGL----DYKVQFTGPTGTNAVEAALKLARKVT-------G-RTNIVAFTNGFHGMTLGSLAV  149 (425)
T ss_pred             HHHHHHHHHHHHhhcCCcCC----CceEEEeCCCHHHHHHHHHHHHHHhc-------C-CCeEEEECCccCCccHHHHHh
Confidence            34444555677765322110    001245 4799999999999998652       1 222333344456544433333


Q ss_pred             hC---------CCCCCeEEeeCCCCCCCc-cCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc----CChhHHHHHHH
Q 010842          208 AG---------VSPANIRALPTSVDANFS-LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----DNVEPLAEVAN  273 (499)
Q Consensus       208 ~G---------~g~~~v~~v~~~~~~~~~-~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d~l~~I~~ia~  273 (499)
                      .|         .....+..+|........ -|+++|++.+++.......+.+|++--.....|.+    +.+++|.++|+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~  229 (425)
T PRK09264        150 TGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCR  229 (425)
T ss_pred             cCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHH
Confidence            22         111245666654210001 26788888886532111234556655555555654    46999999999


Q ss_pred             HhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccC-CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCC
Q 010842          274 EYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLS-YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESN  352 (499)
Q Consensus       274 ~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~  352 (499)
                      +||+++++|+++.|+......+.....++ ..|.++++  |.++. .+.+|+++++++  + ..+.  .... .      
T Consensus       230 ~~g~llI~DEV~tG~GrtG~~~~~~~~~v-~PDi~t~~--K~l~~~G~pigav~~~~~--i-~~~~--~~~~-~------  294 (425)
T PRK09264        230 KHDILLIVDDIQAGCGRTGTFFSFERAGI-TPDIVTLS--KSISGYGLPMALVLIKPE--L-DVWK--PGEH-N------  294 (425)
T ss_pred             HcCcEEEEechhhCCccccHHHHHhhcCC-CCCEEEec--cccCCCccceEEEEEchh--h-hccC--CCcc-C------
Confidence            99999999999977532211111111233 36888775  98875 456788888754  2 1111  0000 0      


Q ss_pred             CcccCCCcccCCCCCCCcHHHHHHH-HHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCC-CceEEEEEecC
Q 010842          353 SVVDFKDWQVGTGRRFKSLRLWMVL-RSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPR-HFALVCFRLNP  426 (499)
Q Consensus       353 ~~~~~~~~~~~~sr~~~al~~~~~l-~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~-~~~~v~f~~~~  426 (499)
                           .  +. .+.+.......+++ ..+..   .+..++..++.++|.+.|++    .|.+ +.... ...++.+.+.+
T Consensus       295 -----~--T~-~gnp~~~aaa~a~l~~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~~-~~~vrg~Gl~~~i~l~~  362 (425)
T PRK09264        295 -----G--TF-RGNNLAFVTATAALEEYWSD---DAFEKEVKAKGELVRERLEEIAAKYPGL-GAEVRGRGMMQGIDFGD  362 (425)
T ss_pred             -----C--CC-CCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHHhCCCc-eecceecccEEEEEecC
Confidence                 0  00 11111122222334 22222   24556666667777766654    3322 11111 22334555533


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842          427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       427 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~  496 (499)
                               ......+.+.+.++|..+.. .... ...||+++ ....|++||++++++|.++.+++.++
T Consensus       363 ---------~~~~~~l~~~~~~~Gv~~~~-~~~~-~~~lr~~p-~l~~t~~ei~~~~~~l~~~l~~~~~~  420 (425)
T PRK09264        363 ---------GELAGKIAAEAFENGLIIET-SGPE-DEVVKLLP-PLTIDEEELEEGLDILEEAVAEVLAE  420 (425)
T ss_pred             ---------hHHHHHHHHHHHHCCCEEec-cCCC-CCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence                     23456788888899965432 2111 25688887 36789999999999999998876543

>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional

Probab=99.56  E-value=1.1e-11  Score=127.57  Aligned_cols=313  Identities=10%  Similarity=0.031  Sum_probs=182.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      .....++.+.|++++.-+..       ...|+++|||||-.|+..||.....+    | +..+|......|-...-+...
T Consensus       123 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGsEAve~AlklAr~~t~~~----g-r~~ii~~~~~yHG~t~~~ls~  190 (459)
T PRK11522        123 DPLRAMLAKTLAALTPGKLK-------YSFFCNSGTESVEAALKLAKAYQSPR----G-KFTFIATSGAFHGKSLGALSA  190 (459)
T ss_pred             CHHHHHHHHHHHHhCCCCCC-------EEEEeCCchHHHHHHHHHHHHHhccC----C-CcEEEEecCCCCCCcHHHhhh
Confidence            33444455557777642211       24899999999999999998763211    1 122333334445544444443


Q ss_pred             hCCCC---------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHH
Q 010842          208 AGVSP---------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANE  274 (499)
Q Consensus       208 ~G~g~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~  274 (499)
                      .|-..         ..+..+|.       -|.++|++.+++....+..+.+|++--.....|.+-|    ++++.++|++
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~  263 (459)
T PRK11522        191 TAKSTFRKPFMPLLPGFRHVPF-------GNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDE  263 (459)
T ss_pred             cCCcccccCCCCCCCCCcccCC-------CCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHH
Confidence            33210         01222322       1788999988764333445666777666667788877    9999999999


Q ss_pred             hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842          275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS  353 (499)
Q Consensus       275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~  353 (499)
                      ||+.+++|.++.|+.....-+.....|+ ..|.+++  -|.++.. +.+|.++.+++ .. +.+... ++....      
T Consensus       264 ~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~--gK~lggG~~Pigav~~~~~-i~-~~~~~~-~~~~~~------  331 (459)
T PRK11522        264 FGALLILDEVQTGMGRTGKMFACEHENV-QPDILCL--AKALGGGVMPIGATIATEE-VF-SVLFDN-PFLHTT------  331 (459)
T ss_pred             cCCEEEeccceecCCccchhhhhhccCC-CCCEEEe--chhhhCCCccceeEEEcHH-HH-HHhccC-CcccCC------
Confidence            9999999999976422211111122344 3787766  6888754 35788887753 22 222211 111111      


Q ss_pred             cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeE-EEcC--CCceEEEEEecCCCC
Q 010842          354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFE-IVVP--RHFALVCFRLNPYPH  429 (499)
Q Consensus       354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~-~~~~--~~~~~v~f~~~~~~~  429 (499)
                              .-.+.+..+....++|+.+-.+   +..++..++.++|.+.|+++. .+. ++..  ....++.+.+...  
T Consensus       332 --------T~~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~--  398 (459)
T PRK11522        332 --------TFGGNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN--  398 (459)
T ss_pred             --------CCCCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCc--
Confidence                    0112222233344455555333   456777788888888887641 121 1111  1234455555431  


Q ss_pred             CCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          430 SGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       430 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                             .....+.+.+.++|.++ .+.. .+...+|+++. ...|++||++++++|.++.+++.
T Consensus       399 -------~~~~~i~~~l~~~Gvl~-~~~~-~~~~~lr~~Pp-l~~t~~~id~~l~~l~~~l~~~~  453 (459)
T PRK11522        399 -------EIGYNFASEMFRQRVLV-AGTL-NNAKTIRIEPP-LTLTIEQCEQVLKAARKALAAMR  453 (459)
T ss_pred             -------hHHHHHHHHHHHCCeEE-EecC-CCCCEEEEECC-ccCCHHHHHHHHHHHHHHHHHHH
Confidence                   23566788888888543 3322 23467999984 77899999999999999887764

>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]

Probab=99.55  E-value=9.1e-13  Score=133.69  Aligned_cols=230  Identities=21%  Similarity=0.191  Sum_probs=168.5

Q ss_pred             HHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCC
Q 010842          135 MDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPAN  214 (499)
Q Consensus       135 ~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~  214 (499)
                      .+..++.||.+.++        ++++|.|.||...+.+...           ++..|+++++.|.|+..++.+.|+   .
T Consensus        76 qe~aA~~fgAd~ty--------FvvNGTS~ank~vi~a~~~-----------~GD~VLvdRN~HKSi~~glilaGa---~  133 (557)
T COG1982          76 QELAARVFGADHTY--------FVVNGTSTANKAVINAVLT-----------PGDKVLVDRNCHKSIHHGLILAGA---T  133 (557)
T ss_pred             HHHHHHHhCCCceE--------EEECCccHHHHHHHHhhcC-----------CCCEEEecCCccHHHHHHHHHcCC---c
Confidence            35589999999986        8888888888877776643           688999999999999999999999   8


Q ss_pred             eEEeeCCCCCC----CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhc
Q 010842          215 IRALPTSVDAN----FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSAC  290 (499)
Q Consensus       215 v~~v~~~~~~~----~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~  290 (499)
                      .+++....+..    +.++.+.+++++.+.....   .++++|.|| ..|.+-++++|.+.++.+++|+.+|.+++...-
T Consensus       134 Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~---k~~vitnpT-YdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~  209 (557)
T COG1982         134 PVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAE---KLAVITNPT-YDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFD  209 (557)
T ss_pred             eEEecCCCCccccccCCCCHHHHHHHHHhChhhh---eeEEEecCc-cceEeecHHHHHHHHhhcCceEEhhhcCccccc
Confidence            88876554321    4789999999987654321   256677765 589999999999999999999999999987765


Q ss_pred             cCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCc-----hhHHHhh----cCCccCCCCCCCCCCCcccCCCcc
Q 010842          291 ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQP-----GLLVKAL----STDPEYLKNKPSESNSVVDFKDWQ  361 (499)
Q Consensus       291 ~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~-----~~l~~~~----~~~~~yl~~~~~~~~~~~~~~~~~  361 (499)
                      .++..... .--..+|.++.|.||.+.+-..++++.+++.     +.+.+++    +.+|.|.--               
T Consensus       210 ~~~~l~~~-~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~---------------  273 (557)
T COG1982         210 FSPMLPES-ALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLM---------------  273 (557)
T ss_pred             ccccCcch-hhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHH---------------
Confidence            55433221 1112499999999999998888999999972     3333333    222222211               


Q ss_pred             cCCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842          362 VGTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR  415 (499)
Q Consensus       362 ~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~  415 (499)
                             .++-+  +-+..   |+.-.++.++...+.++++++.+.++++|+++.++
T Consensus       274 -------ASlD~--Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~  321 (557)
T COG1982         274 -------ASLDV--ARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPE  321 (557)
T ss_pred             -------HHHHH--HHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecccc
Confidence                   11222  22222   44445556888899999999999999889888765

>PRK04260 acetylornithine aminotransferase; Provisional

Probab=99.55  E-value=1.1e-11  Score=125.48  Aligned_cols=277  Identities=13%  Similarity=0.116  Sum_probs=158.4

Q ss_pred             EEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC------CeEEeeCCCCCCCccC
Q 010842          156 GVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA------NIRALPTSVDANFSLS  229 (499)
Q Consensus       156 g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~------~v~~v~~~~~~~~~~d  229 (499)
                      .++++|||+||..|+..+|...       + ++.+|......|-+...++...|....      .+..++...    ..|
T Consensus        87 ~~~~~SGseA~~~Al~~ar~~~-------~-~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d  154 (375)
T PRK04260         87 AFFCNSGAEANEAAIKIARKAT-------G-KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI----FND  154 (375)
T ss_pred             EEEcCccHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC----CCC
Confidence            4799999999999999997642       1 233455556678877766655443100      011111110    248


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCC
Q 010842          230 PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERV  305 (499)
Q Consensus       230 ~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~a  305 (499)
                      +++|++.+.++      ..+|++....+++|.+.+    +++|.++|+++|+++++|++|.++......+.....++ .-
T Consensus       155 l~~l~~~l~~~------~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~-~p  227 (375)
T PRK04260        155 LNSVKALVNKN------TAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGI-EP  227 (375)
T ss_pred             HHHHHHhcCCC------eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCC-CC
Confidence            89999887532      346777777788888854    89999999999999999999976422111111112233 25


Q ss_pred             ceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHH-
Q 010842          306 DSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLN-  384 (499)
Q Consensus       306 Dsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g-  384 (499)
                      |.+  +..|.++..+..|+++.+++  +...+... .+..               +. .+.+..+..+..++..+..++ 
T Consensus       228 di~--t~sK~l~~G~~ig~~~~~~~--~~~~~~~~-~~~~---------------t~-~~~~~~~~aa~a~l~~~~~~~~  286 (375)
T PRK04260        228 DIF--TLAKGLANGVPVGAMLAKSS--LGGAFGYG-SHGS---------------TF-GGNKLSMAAASATLDIMLTAGF  286 (375)
T ss_pred             CEE--EecccccCCcceEEEEEcHH--HHhhcCCC-CCCC---------------CC-CcCHHHHHHHHHHHHHHHhhHH
Confidence            655  45898875566888888753  22222210 0000               00 111112223333444433233 


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEE
Q 010842          385 LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYM  464 (499)
Q Consensus       385 ~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~  464 (499)
                      .++..+....+.+.+.+.+.+.+.+.-+. .....+.+.+...           ..++.+++.++|..+...    +...
T Consensus       287 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~~~-----------~~~~~~~l~~~Gi~v~~~----~~~~  350 (375)
T PRK04260        287 LEQALENGNYLQEQLQKALQDKETVTTVR-GLGYMIGIETTAD-----------LSQLVEAARDKGLIVLTA----GTNV  350 (375)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCCCeeEEe-ccceEEEEEecCc-----------HHHHHHHHHhCCCEEecC----CCCE
Confidence            22333333334444444444444332221 2334455554221           356788888889754322    3467


Q ss_pred             EEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          465 LRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       465 lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      +|+++ +...+++||++++++|+++
T Consensus       351 lR~~~-~~~~t~~~i~~~l~~l~~~  374 (375)
T PRK04260        351 IRLLP-PLTLTKEEIEQGIAILSEV  374 (375)
T ss_pred             EEEcC-CCccCHHHHHHHHHHHHHh
Confidence            99999 4778899999999999765

>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]

Probab=99.53  E-value=2.2e-13  Score=132.47  Aligned_cols=266  Identities=15%  Similarity=0.215  Sum_probs=181.5

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh--hhhcc-----CCeEEEcCCCCch
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV--GAENM-----HKLVVYGSDQTHS  199 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~--~~~g~-----~~~~i~~s~~~H~  199 (499)
                      +.-+.-.+..|+..+|.+.++..++......|...-..|+..++..|....++..  -+.|+     ..+++|+|+..|.
T Consensus       163 an~i~Gdanh~fgnLF~FAdsqiycsdPaasfhadiadai~haVkLAikar~~~dhs~eG~~afaa~aaPt~YiS~alh~  242 (838)
T KOG0630|consen  163 ANSISGDANHVFGNLFHFADSQIYCSDPAASFHADIADAIGHAVKLAIKARCGGDHSLEGGIAFAALAAPTFYISEALHM  242 (838)
T ss_pred             HHhhccchHHHHHHHHhhcccccccCCchhhhhhhhhhHHHHHHHhhhhhccCCccccccccchHhhcCceEEEcccccH
Confidence            3445556778999999986642111101112222222344445544443333321  01122     3678999999998


Q ss_pred             h-HHHHHHHhCCCCCCeEEeeCCCCC--CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC
Q 010842          200 T-FAKVCKLAGVSPANIRALPTSVDA--NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG  276 (499)
Q Consensus       200 s-~~ka~~~~G~g~~~v~~v~~~~~~--~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~  276 (499)
                      - ...+|+-+|+.-..+..++-...+  .++||.-.+++.|+++..+|++|.++++..|++-+|..|.|-.|.++|++++
T Consensus       243 ~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eaha  322 (838)
T KOG0630|consen  243 DLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAHA  322 (838)
T ss_pred             HHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHhh
Confidence            6 556889999954344444322222  2599999999999999999999999999999999999999999999999997


Q ss_pred             -CEEEeeccccchhccCccchhhhcC-CCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842          277 -IWVHVDAAYAGSACICPEFRHYLNG-IERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV  354 (499)
Q Consensus       277 -~~lhvD~A~g~~~~~~~~~~~~~~g-~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  354 (499)
                       +|+|.-| ++..++.|.+....+.. .+..||++++.--|+++|.---+++-|.-.       ..+..-+         
T Consensus       323 kfWLHasG-haiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRPle-------g~aaSaf---------  385 (838)
T KOG0630|consen  323 KFWLHASG-HAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLE-------GSAASAF---------  385 (838)
T ss_pred             heeEeecc-chhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeecccc-------cccchhc---------
Confidence             9999987 34444455442222222 345899999999999999544444333211       0000000         


Q ss_pred             ccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                          +-.+...++..++.+|.+++++|...+.++++....+.+.+.+.+.+.++++++.
T Consensus       386 ----esdpi~rekLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eiemig  440 (838)
T KOG0630|consen  386 ----ESDPILREKLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIEMIG  440 (838)
T ss_pred             ----ccChHHHHhhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCceeEec
Confidence                0012356778899999999999999999999999999999999999999999875

>PRK08117 4-aminobutyrate aminotransferase; Provisional

Probab=99.52  E-value=6.5e-11  Score=122.00  Aligned_cols=318  Identities=11%  Similarity=0.021  Sum_probs=176.8

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      ..+.++.+.|++++.-..+       ..+|+++||+||..|+..||...       | ++.+|......|-+..-+..+.
T Consensus        86 ~~~~~la~~L~~~~~~~~~-------~v~f~~SGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~s~~  150 (433)
T PRK08117         86 ESILKLAEELAEITPGGLD-------CFFFSNSGAEAIEGALKLAKHVT-------K-RPYIISFTGCFHGRTLGALSVT  150 (433)
T ss_pred             HHHHHHHHHHHHhCCCCCC-------EEEEeCcHHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCCcCHHHHhhc
Confidence            3444455558887731111       24888999999999999998652       1 2334455555677655544332


Q ss_pred             CC--------C--CCCeEEeeCCCCCCCc------------cCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC--
Q 010842          209 GV--------S--PANIRALPTSVDANFS------------LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN--  264 (499)
Q Consensus       209 G~--------g--~~~v~~v~~~~~~~~~------------~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~--  264 (499)
                      +-        +  ...+..+|....  ++            -|+++|++.++... .+..+.+|++--.....|.+-|  
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~aavi~Epi~~~~G~~~~~~  227 (433)
T PRK08117        151 TSKSKYRKYYQPLLGSVYQAPYPYC--DRCPKGEDPEVCFLECLRDLESLFKHQV-TPEEVAAVIIEPVLGEGGYIVPPK  227 (433)
T ss_pred             CCCccccccCCCCCCCcEEeCCCcc--ccccccCchhHHHHHHHHHHHHHHHhcc-CCCcEEEEEECCeeCCCCCccCCH
Confidence            21        0  113445554321  11            15666777765421 1234556666666666788878  


Q ss_pred             --hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCcc
Q 010842          265 --VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPE  342 (499)
Q Consensus       265 --l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~  342 (499)
                        +++|.++|++||+.+++|.+|.|+.....-+.....++. .|.+  ..-|.++..+..|+++.+++  +...+...  
T Consensus       228 ~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~-pDi~--t~sK~lg~G~pigav~~~~~--i~~~~~~~--  300 (433)
T PRK08117        228 SFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVV-PDIM--TIAKGIASGLPLSAVVASKE--LMEQWPLG--  300 (433)
T ss_pred             HHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCC-CCEe--ehhhhccCCCcceeEEEcHH--HHhhccCC--
Confidence              999999999999999999999874322111111112332 5654  45798876566888877653  22222110  


Q ss_pred             CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC-CCc-eE
Q 010842          343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP-RHF-AL  419 (499)
Q Consensus       343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~-~~~-~~  419 (499)
                       . ..            .+. .+.+.......++++.+..+   ...++..++.+++.+.|+++. .+.++.. +.. .+
T Consensus       301 -~-~~------------~T~-~~np~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~  362 (433)
T PRK08117        301 -S-HG------------TTF-GGNPVACAAALATLEVIKEE---KLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLM  362 (433)
T ss_pred             -C-CC------------CCC-CcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcE
Confidence             0 00            011 11122222333344433222   455666677777777776541 1111111 111 22


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      +.+.+.+.. ...  .......+.+.+.+.|..+....  ....++|+++. ..+|+++|++++++|.++.+++.+
T Consensus       363 ~gi~~~~~~-~~~--~~~~~~~~~~~l~~~Gv~~~~~g--~~~~~lRl~p~-~~~t~~~i~~~~~~l~~~l~~~~~  432 (433)
T PRK08117        363 IGIEIVDPD-GEP--DGDAVEKILDKCLEKGLLFYLCG--NAGNVLRMIPP-LTVTKEEIDEGLDILDEALTEYEA  432 (433)
T ss_pred             EEEEEecCC-CCc--chHHHHHHHHHHHHCCCEEeecC--CCCCEEEEeCC-ccCCHHHHHHHHHHHHHHHHHHhc
Confidence            334443221 000  12345667788888997654321  12357999984 678999999999999999887643

>TIGR03372 putres_am_tran putrescine aminotransferase

Probab=99.51  E-value=1.1e-10  Score=119.42  Aligned_cols=307  Identities=9%  Similarity=0.022  Sum_probs=175.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      .....++.+.|++++..+..       ..+|+++|||||-.|+..||......    | +..+|.....-|-...-+...
T Consensus       116 ~~~~~~lAe~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t~~~----g-r~~ii~~~~~yHG~t~~~ls~  183 (442)
T TIGR03372       116 DPLRALLAKTLAALTPGKLK-------YSFFCNSGTESVEAALKLAKAYQSPR----G-KFTFIAASGAFHGKSLGALSA  183 (442)
T ss_pred             CHHHHHHHHHHHHhCCCCcC-------EEEEeCCchHHHHHHHHHHHHHHhhc----C-CcEEEEECCCccCCCHHHhhc
Confidence            33445556668887643222       24889999999999999998763211    1 122344444456554444433


Q ss_pred             hCC-------C--CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHH
Q 010842          208 AGV-------S--PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANE  274 (499)
Q Consensus       208 ~G~-------g--~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~  274 (499)
                      .|-       +  ...+..+|.+       |.+++++.+++....+..+.+|++--....-|.+-|    +++|.++|++
T Consensus       184 t~~~~~~~~~~p~~~~~~~~p~~-------d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~  256 (442)
T TIGR03372       184 TAKPAFRKPFMPLLPGFHHVAFG-------DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDE  256 (442)
T ss_pred             cCCcccCCCCCCCCCCCEEeCCC-------CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHH
Confidence            221       0  0123444432       678888888654434455666666666666788877    9999999999


Q ss_pred             hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842          275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS  353 (499)
Q Consensus       275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~  353 (499)
                      ||+.+++|.++.|+.....-+.....++ ..|.+++  -|.++.. +.+|.++.+++  +.+.+... .+....      
T Consensus       257 ~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~--gK~lg~G~~Pigavv~~~~--i~~~~~~~-~~~~~~------  324 (442)
T TIGR03372       257 FGALLILDEVQTGMGRTGKMFACEHEGV-QPDILCL--AKALGGGVMPIGATIATEA--VFSVLFDN-PFLHTT------  324 (442)
T ss_pred             cCCEEEEeecccCCCccccchhhhhcCC-CCCeeee--hhhhcCCcccceEEEecHH--HHHhhhcc-CccccC------
Confidence            9999999999976432221111222344 3788774  6888754 35777777643  22333211 111111      


Q ss_pred             cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CC-eEEEcCCCceEEEEEecCCC
Q 010842          354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PR-FEIVVPRHFALVCFRLNPYP  428 (499)
Q Consensus       354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~-~~~~~~~~~~~v~f~~~~~~  428 (499)
                              .-.+.+..+....++|+.+-.+   +..++..++.++|.+.|+++    |. +.-+ .....++.+.+..  
T Consensus       325 --------T~~gnp~~~Aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~~i~~v-RG~Gl~~giel~~--  390 (442)
T TIGR03372       325 --------TFGGNPLACAAALATINELLEK---NLPAQAAIKGDFLLDGFQQLAAEYPDLIIEA-RGKGLLMAIEFRD--  390 (442)
T ss_pred             --------CCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-ecceEEEEEEeCC--
Confidence                    0011122222333444444333   34556666677777766653    31 1111 1223345555543  


Q ss_pred             CCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          429 HSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       429 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                             +.....+.+.+.++|.++ .... .+...+|+... ...|++|||++++++.+.
T Consensus       391 -------~~~~~~i~~~l~~~Gvl~-~~~~-~~~~~lr~~Pp-l~~t~~~id~~~~~l~~~  441 (442)
T TIGR03372       391 -------NEIGYAFAKELFQQNILV-AGTL-NNAKSIRIEPP-LTITIEQCALVIKAAKDA  441 (442)
T ss_pred             -------hHHHHHHHHHHHHCCcEE-eecC-CCCCEEEEECC-cccCHHHHHHHHHHHHHh
Confidence                   123467888888888544 3221 12357999884 778999999999999875

Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.

>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.50  E-value=1.5e-12  Score=126.08  Aligned_cols=344  Identities=12%  Similarity=0.051  Sum_probs=211.1

Q ss_pred             CCCccccccCCCCCChHHHHHHHHHH-HcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHH
Q 010842           87 WLSPNFFAFFPATVSTAGFLGEMLCA-CFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDS  165 (499)
Q Consensus        87 ~~~p~~~~~~~~~~~~~~~~~~~l~~-~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A  165 (499)
                      ..+=.|+||-.+...-.....+.+.. .+.......+  -+...+-+++.+.+++++|.++.         ++.+-|-..
T Consensus       141 lgSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e--~G~~~~hkelE~l~A~f~g~e~a---------~vF~mGf~T  209 (519)
T KOG1357|consen  141 LGSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHE--AGTTEEHKELEELVARFLGVEDA---------IVFSMGFAT  209 (519)
T ss_pred             ecccccccccccCCcCChHHHHHHHHhcccccccchh--cccHHHHHHHHHHHHHhcCCcce---------EEEeccccc
Confidence            34556777764433322223333332 2222222222  24566777777889999999876         333333322


Q ss_pred             HHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCC
Q 010842          166 ILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGL  245 (499)
Q Consensus       166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~  245 (499)
                      |-+.+-+...           ++..|+-.+..|.|+...|++-|.   .++....+       |+.+||+.|.+....|.
T Consensus       210 Ns~~~p~l~~-----------~gsLIiSDelNHaSi~~GaRLSgA---tiRVfkHN-------dm~~LEr~Lrd~I~~gq  268 (519)
T KOG1357|consen  210 NSMNIPSLLG-----------KGSLIISDELNHASLITGARLSGA---TTRVFRHN-------DMQGLERLLRDAIVYGQ  268 (519)
T ss_pred             cccCcceeec-----------CCcceeeccccchheeccccccCc---eEEEEecC-------CHHHHHHHHHHHHhcCC
Confidence            3222222221           466677788899999999999999   88888754       78999999998877653


Q ss_pred             c----c---EEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchh----hhcCCCCCceeEecccc
Q 010842          246 V----P---LFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH----YLNGIERVDSFSFSPHK  314 (499)
Q Consensus       246 ~----p---~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~----~~~g~~~aDsi~~~~hK  314 (499)
                      .    |   .+|++-.-.+.-|.+.++.++.+++|+|..+||.|+||..++... .-+.    ...+-+.+|.+-.-+.|
T Consensus       269 P~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~-tGrgvce~~g~d~~dvDImMGtftK  347 (519)
T KOG1357|consen  269 PKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGA-TGRGVCEYFGVDPEDVDIMMGTFTK  347 (519)
T ss_pred             CCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCC-CCcceeeccCCCchhheeecceehh
Confidence            2    2   455555556689999999999999999999999999998876521 1111    11223457888888888


Q ss_pred             cccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh----cHHHHHHHHH
Q 010842          315 WLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY----GVLNLQSHIR  390 (499)
Q Consensus       315 ~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~----g~~g~~~~~~  390 (499)
                      .++..  .|.+..+ +. +.+.+.....+-...              ...+.+ -+.....+++.+    |.+.-++.++
T Consensus       348 Sfga~--GGyiags-k~-lid~lrt~s~~~~ya--------------t~~spp-vaqq~~ssl~~i~G~dgt~~g~~k~~  408 (519)
T KOG1357|consen  348 SFGAA--GGYIAGS-KE-LIDYLRTPSPSALYA--------------TSLSPP-VAQQILTSVKHIMGEDGTNRGRQKIE  408 (519)
T ss_pred             hcccc--cceecCc-HH-HHhhhccCCCceeec--------------ccCChH-HHHHHHHHHHhhcCCCcccHHHHHHH
Confidence            88642  3333332 22 323333322221111              111111 122333344443    3456788999


Q ss_pred             HHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee---eECCEEEEEE
Q 010842          391 SDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT---IVGGLYMLRF  467 (499)
Q Consensus       391 ~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---~~~g~~~lRi  467 (499)
                      +..+++++++..+++. +|.+.+..+++++..-+.+..         ....+.++|.+++..++...   +.--....|+
T Consensus       409 ~l~~ns~yfr~~l~~~-gfivyG~~dSpVvplll~~~~---------k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~  478 (519)
T KOG1357|consen  409 RLAENSRYFRWELQKM-GFIVYGNNDSPVVPLLLYGPA---------KIVAFSREMLERNIGVVVVGFPATPLLESRARF  478 (519)
T ss_pred             HHHhhhHHHHHhhhcC-cEEEecCCCCCcceeeecCcc---------cccHHHHHHHhcCceEEEEeCCCchHHHhHHHh
Confidence            9999999999999987 898887666665555443321         13344555666665433221   1111234788


Q ss_pred             eccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          468 AVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       468 ~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      |.. ...|.|+++++++.+.+..+..
T Consensus       479 c~S-a~ht~e~ld~~l~~i~~~g~~~  503 (519)
T KOG1357|consen  479 CLS-ASHTKEDLDRALEVIDRVGDED  503 (519)
T ss_pred             hhc-ccccHHHHHHHHHHHhhhchhh
Confidence            884 7889999999999999887543

>PLN02760 4-aminobutyrate:pyruvate transaminase

Probab=99.50  E-value=7.8e-11  Score=122.60  Aligned_cols=330  Identities=12%  Similarity=0.040  Sum_probs=180.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      +..+.++.+.|.+++.-..-      ...+|+++||+||..|+..||...... +..+ ++.+|......|-+..-++.+
T Consensus       132 ~~~~~~lae~L~~~~~~~~~------~~v~f~~SGsEA~e~AlKlAr~~~~~~-g~~~-r~~iI~~~~~yHG~t~~a~sl  203 (504)
T PLN02760        132 TKPSLDLAKELLEMFTARKM------GKVFFTNSGSEANDTQVKLVWYYNNAL-GRPN-KKKFIARSKSYHGSTLISASL  203 (504)
T ss_pred             cHHHHHHHHHHHhhcCCCCC------CEEEEeCChHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCccCChHhhhhc
Confidence            34445555557777532111      124889999999999999998643110 0001 234555666678776656554


Q ss_pred             hCCC---------CCCeEEeeCCCCCCCc-------------cCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC-
Q 010842          208 AGVS---------PANIRALPTSVDANFS-------------LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN-  264 (499)
Q Consensus       208 ~G~g---------~~~v~~v~~~~~~~~~-------------~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~-  264 (499)
                      .|..         ...+..+|.+.  .|+             ...++|++.+.+.  ....+.+|++--.....|.+-| 
T Consensus       204 sg~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAAvI~EPv~g~gG~~~p~  279 (504)
T PLN02760        204 SGLPALHQKFDLPAPFVLHTDCPH--YWRFHLPGETEEEFSTRLADNLENLILKE--GPETIAAFIAEPVMGAGGVIPPP  279 (504)
T ss_pred             cCChhhccCCCCCCCCcEEeCCCc--ccccCCCCCcHHHHHHHHHHHHHHHHHhc--CCCceEEEEECCccCCCCCcCCC
Confidence            4431         11133333221  011             1124566666421  1234556666555556688878 


Q ss_pred             ---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCC
Q 010842          265 ---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTD  340 (499)
Q Consensus       265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~  340 (499)
                         +++|.++|++||+++++|.++.|+.....-+.....|+. .|.+++  -|.++..+ ..|.++++++  +.+.+...
T Consensus       280 ~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~-PDivtl--gK~lggG~~PigAv~~~~~--i~d~~~~~  354 (504)
T PLN02760        280 ATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIK-PDLVSL--AKALSSAYMPIGAVLVSPE--ISDVIHSQ  354 (504)
T ss_pred             HHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCC-CcEEEe--cccccCCccccceEeecHH--HHhhhhcc
Confidence               999999999999999999999665443332222234553 887776  58876543 4666777643  22333211


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCce
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFA  418 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~  418 (499)
                      ......          +   ....+-....+.+.+++..+..-.-++.+++..++.++|.+.|+++....++.+  -...
T Consensus       355 ~~~~~~----------~---~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl  421 (504)
T PLN02760        355 SNKLGS----------F---AHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGL  421 (504)
T ss_pred             cccccC----------c---ccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCce
Confidence            000000          0   000111112344444443332111124677788888888888876532222211  1123


Q ss_pred             EEEEEecCCCC-CCcc-hhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          419 LVCFRLNPYPH-SGSA-DTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       419 ~v~f~~~~~~~-~~~~-~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ++.+.+..... .+.. ....+...+.+.+.++|.++..    .+ ..+|++.. ...|++|||++++++.++.+++
T Consensus       422 ~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~----~g-~~lrl~Pp-l~it~eeid~~~~~l~~al~~~  492 (504)
T PLN02760        422 ILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRV----AG-DNIMMSPP-LIITPEEVDELISIYGKALKAT  492 (504)
T ss_pred             EEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEe----cC-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHH
Confidence            44444432210 0000 0123466788888899965432    12 35898874 6689999999999999887765

>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]

Probab=99.49  E-value=4.6e-11  Score=115.57  Aligned_cols=333  Identities=12%  Similarity=0.118  Sum_probs=207.7

Q ss_pred             ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842          120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS  199 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~  199 (499)
                      .|.++.+..++-..+.+.....+..+...    ..+.++|+|.|.+...++..+.+           .+..|++...++.
T Consensus        95 QYg~s~G~peLl~fik~h~~~~ih~p~~~----~wdiiit~G~t~~l~~~l~~~~N-----------~gd~vlie~~ty~  159 (472)
T KOG0634|consen   95 QYGQSSGIPELLLFIKDHNRPTIHAPPYK----NWDIIITNGNTDGLFKVLRTLIN-----------RGDHVLIEEYTYP  159 (472)
T ss_pred             ccccccCcHHHHHHHHHhccccccCCCCC----CceEEEecCCchHHHHHHHHhhc-----------CCCceEEecccch
Confidence            45666777777777665444455554321    12578999999999999998877           4678999999999


Q ss_pred             hHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHc--C-CccEEEEEec--CCCcccccCCh---hHHHHH
Q 010842          200 TFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEA--G-LVPLFLCATV--GTTSTTAVDNV---EPLAEV  271 (499)
Q Consensus       200 s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~--g-~~p~~vv~t~--gtt~~G~id~l---~~I~~i  271 (499)
                      +...+++.+|+   .++.|+.|.+   .++++.|++.+..-+-.  + ..|. |.-|.  |.||||.--.+   ++|.+|
T Consensus       160 ~AL~s~~a~gv---~~ipv~md~~---Gi~pE~l~~il~~w~~~~~k~~~p~-vlYTIPTgqNPTG~tls~errk~iy~L  232 (472)
T KOG0634|consen  160 SALQSMEALGV---KIIPVKMDQD---GIDPESLEEILSNWKPGSYKKPKPH-VLYTIPTGQNPTGNTLSLERRKKIYQL  232 (472)
T ss_pred             HHHHhccccCc---eEEeccccCC---CCCHHHHHHHHhcCCcccccCCCCe-EEEeCcCCCCCCCCccCHHHHHHHHHH
Confidence            99999999999   8888888765   59999999998764322  1 2353 44444  56999998665   789999


Q ss_pred             HHHhCCEEEeeccccchhccC---------ccch------hhhcCCCCC----ceeEec-ccccccCCCcceEEEEeCch
Q 010842          272 ANEYGIWVHVDAAYAGSACIC---------PEFR------HYLNGIERV----DSFSFS-PHKWLLSYLDCCCLWVKQPG  331 (499)
Q Consensus       272 a~~~~~~lhvD~A~g~~~~~~---------~~~~------~~~~g~~~a----Dsi~~~-~hK~l~~p~~~g~l~~r~~~  331 (499)
                      |++|++.++.|..|.-..+..         |.+.      .+....-..    -+|..| +.|.+....-.|++-..+. 
T Consensus       233 ArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~-  311 (472)
T KOG0634|consen  233 ARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSL-  311 (472)
T ss_pred             HHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHH-
Confidence            999999999999986543321         1111      011111111    123222 3566654455666654332 


Q ss_pred             hHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHH----HHHHHHHHHHhc-C
Q 010842          332 LLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDI----RLAKMFEGFVKS-D  406 (499)
Q Consensus       332 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~----~~a~~l~~~L~~-~  406 (499)
                      .+.+.+...                  +...+.-..+...-+++.++..|++|+.+.+.+.+    ..+..+...+.+ +
T Consensus       312 ~l~ril~~a------------------e~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kyl  373 (472)
T KOG0634|consen  312 FLKRILDLA------------------EVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYL  373 (472)
T ss_pred             HHHHHhhhc------------------ceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            222221111                  11111211223466788889999988877776655    344455555544 3


Q ss_pred             CC--eEEEcCCCceE-EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE--C-----CEEEEEEeccCCCCcH
Q 010842          407 PR--FEIVVPRHFAL-VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV--G-----GLYMLRFAVGASLTDE  476 (499)
Q Consensus       407 ~~--~~~~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~-----g~~~lRi~~~~~~~t~  476 (499)
                      |.  +++. +|..+. ++++++-........+++.-+.+...+.+.|+.++.+..+  .     ++-++|+++.  ..+.
T Consensus       374 p~~~~~~~-~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a--~a~~  450 (472)
T KOG0634|consen  374 PKSVCEYH-PPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIA--FAEP  450 (472)
T ss_pred             CCCeeEEe-cCCcceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEee--cCCH
Confidence            43  3444 554444 4455531100112335666667777888889866655433  1     3348999995  4677


Q ss_pred             HHHHHHHHHHHHHHHHHhcc
Q 010842          477 RHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       477 ~di~~l~~~l~~~~~~l~~~  496 (499)
                      +++++.++++..++++....
T Consensus       451 e~l~~g~~rf~~~ike~f~~  470 (472)
T KOG0634|consen  451 EKLDEGIERFGSVIKEHFIT  470 (472)
T ss_pred             HHHHHHHHHHHHHHHHHhhc
Confidence            89999999998888876543

>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=99.49  E-value=9.4e-12  Score=121.15  Aligned_cols=296  Identities=15%  Similarity=0.119  Sum_probs=181.3

Q ss_pred             HHHHHHHHHcC-CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEE-cCCCCchhHHHHHHHh--
Q 010842          133 VVMDWLATMLK-LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVY-GSDQTHSTFAKVCKLA--  208 (499)
Q Consensus       133 ~~~~~la~l~g-~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~-~s~~~H~s~~ka~~~~--  208 (499)
                      ++.++|+++.+ .+.         .+|++||||||-.|+..||.+...      ..+..|+ +...-|-...-+....  
T Consensus        88 ~la~~L~~~s~~~d~---------vff~NSGaEA~EaAiKlARk~~~~------~~k~~Iia~~nsFHGRT~galS~t~~  152 (404)
T COG4992          88 ELAEKLVELSPFADR---------VFFCNSGAEANEAALKLARKYTGD------PEKSKIIAFENSFHGRTLGALSATGQ  152 (404)
T ss_pred             HHHHHHHhhCccccE---------EEEcCCcHHHHHHHHHHHHHHcCC------CCCcEEEEEcCCcCCccceeeeccCC
Confidence            34455888886 332         489999999999999999987531      1233333 3334453322221111  


Q ss_pred             -----CCC--CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCC
Q 010842          209 -----GVS--PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGI  277 (499)
Q Consensus       209 -----G~g--~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~  277 (499)
                           +.+  ...++.||.+       |+++|+++|+++++      +|++---.-..|.+-|    ++++.++|++||+
T Consensus       153 ~ky~~~F~Pl~~g~~~vpfn-------Di~al~~ai~~~ta------AvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~  219 (404)
T COG4992         153 PKYRKGFGPLLPGFRHVPFN-------DIEALEAAIDEDTA------AVIVEPIQGEGGVIPAPPEFLKALRELCDEHGA  219 (404)
T ss_pred             hhhccCCCCCCCCceecCCC-------CHHHHHHHhccCeE------EEEEecccCCCCCCCCCHHHHHHHHHHHHHhCe
Confidence                 111  1245666653       89999999999765      5555555556677633    7899999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF  357 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  357 (499)
                      .++.|..+.|......-+.....++. -|.++.  -|.|+..+..|.++.++. .. ..+       ...          
T Consensus       220 LLI~DEVQtG~GRTGk~fA~e~~gV~-PDI~tl--aK~LgGG~PigA~la~~~-~~-~~~-------~~G----------  277 (404)
T COG4992         220 LLILDEVQTGLGRTGKLFAYEHYGVE-PDILTL--AKALGGGFPIGAMLATEE-IA-SAF-------TPG----------  277 (404)
T ss_pred             EEEEeccccCCCccchHHHHHHhCCC-CCEEEe--eccccCCccceeeEEchh-hh-hcC-------CCC----------
Confidence            99999999886443333333333543 688776  588877788999988732 11 111       110          


Q ss_pred             CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcCC--CceEEEEEecCCCCCCcch
Q 010842          358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVPR--HFALVCFRLNPYPHSGSAD  434 (499)
Q Consensus       358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~--~~~~v~f~~~~~~~~~~~~  434 (499)
                       .++  .+-....|...++...+..-.-++.+++..++.++|.+.|+++. .+.++.+.  ..-++.+.+.+..      
T Consensus       278 -~Hg--STfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~------  348 (404)
T COG4992         278 -DHG--STFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPY------  348 (404)
T ss_pred             -ccc--CCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcc------
Confidence             000  01111345544444443222223456667777888888887752 12233221  2233444454320      


Q ss_pred             hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          435 TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       435 ~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                         ....+.+.+.++|.++...    +..++|+... ...+++||+..+++++++++....
T Consensus       349 ---~a~~~~~~~~~~gvL~~~a----~~~ViR~~Pp-L~i~~eei~~~~~~l~~~l~~~~~  401 (404)
T COG4992         349 ---RARDIVRALREEGVLVLPA----GPNVIRFLPP-LVITEEEIDEALDALERALAAASA  401 (404)
T ss_pred             ---cHHHHHHHHHHCCeEEecC----CCCeEEecCC-ccCCHHHHHHHHHHHHHHHHHhhh
Confidence               2467788888899554332    3358999984 778999999999999999887654

>PRK05769 4-aminobutyrate aminotransferase; Provisional

Probab=99.49  E-value=2.7e-10  Score=117.24  Aligned_cols=315  Identities=13%  Similarity=0.062  Sum_probs=174.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      +..+.++.+.|++++.-+..      ....|+++||||+..|+..||...       | ++.+|......|-...-++.+
T Consensus        96 ~~~~~~lAe~L~~~~p~~~~------~~v~f~~SGsEA~e~AlklAr~~t-------g-r~~Ii~~~~~yHG~t~~~ls~  161 (441)
T PRK05769         96 YEPAVELAERLVEIAPGGFE------KKVFFTNSGTESNEAAIKIARYHT-------G-RKYIIAFLGAFHGRTYGSLSL  161 (441)
T ss_pred             CHHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHHh-------C-CCeEEEECCCcCCccHHHHHh
Confidence            34555666778887742110      124899999999999999999652       1 222333344456554444443


Q ss_pred             hCC----------CCCCeEEeeCCCCCCCcc-----C--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842          208 AGV----------SPANIRALPTSVDANFSL-----S--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN  264 (499)
Q Consensus       208 ~G~----------g~~~v~~v~~~~~~~~~~-----d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~  264 (499)
                      .|-          ....+..+|...  .++.     |        .+.+++.+.+....+..+.+|++--.....|.+-|
T Consensus       162 t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~  239 (441)
T PRK05769        162 TASKPVQRKGFFPLMPGVIHVPYPN--PYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVP  239 (441)
T ss_pred             cCCCcccccCCCCCCCCeEEeCCCc--cccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCC
Confidence            321          012345555431  1111     1        23344423221111234556666655666788888


Q ss_pred             ----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC
Q 010842          265 ----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD  340 (499)
Q Consensus       265 ----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~  340 (499)
                          +++|.++|++||+.+++|.++.|+.....-+.....++ ..|.++++  |.++..+..|+++.+++- . ..+   
T Consensus       240 ~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv-~pDivt~~--K~l~~G~p~gav~~~~~i-~-~~~---  311 (441)
T PRK05769        240 PKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGV-EPDIITLA--KAIAGGLPLGAVIGRAEL-M-FLP---  311 (441)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCC-CCCEEEEc--ccccCCcccEEEEEehhh-h-hcC---
Confidence                99999999999999999999986432211111112244 26888764  777655668888876542 1 111   


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC--CCc
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP--RHF  417 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~--~~~  417 (499)
                      .... .             .+. .+.+........+|+.+..    +..++..++.++|.+.|+++. .+.++..  ...
T Consensus       312 ~~~~-~-------------~T~-~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G  372 (441)
T PRK05769        312 PGSH-A-------------NTF-GGNPVAAAAALATLEELEE----GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLG  372 (441)
T ss_pred             CCCC-C-------------CCC-CcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecce
Confidence            0000 0             011 1112222233344444422    566777778888888776531 1222211  122


Q ss_pred             eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .++.+.+....  . +........+.+.+.++|..+ .+   .+...+|++.. ...|++||+++++++.++..++
T Consensus       373 ~~~~i~~~~~~--~-~~~~~~~~~~~~~~~~~Gil~-~~---~~~~~lr~~p~-l~~t~~~id~~~~~l~~~l~~~  440 (441)
T PRK05769        373 LMIGVELVKDR--K-EPDPKLRDKVLYEAFKRGLLL-LG---AGKSAIRIIPP-LIITEEEADIGLEILEEAIKEL  440 (441)
T ss_pred             EEEEEEeccCC--c-cccHHHHHHHHHHHHhCCcEE-ec---CCCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHh
Confidence            34444443221  0 001234567788888899654 22   23467999884 7789999999999999988764

>PRK12403 putative aminotransferase; Provisional

Probab=99.49  E-value=1.5e-10  Score=119.65  Aligned_cols=324  Identities=12%  Similarity=0.038  Sum_probs=174.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccC-CeEEEc-CCCCchhHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMH-KLVVYG-SDQTHSTFAKVC  205 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~-~~~i~~-s~~~H~s~~ka~  205 (499)
                      .....++.+.|+++++...+       ..+++++||+||..|+..||......    |.+ +.+|+. ....|-+..-++
T Consensus        97 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseA~e~AiklAr~~~~~~----g~~~r~~ii~~~~~yHG~t~~~~  165 (460)
T PRK12403         97 HPAVIELSELLFSLLPGHYS-------HAIYTNSGSEANEVLIRTVRRYWQVL----GKPQKKIMIGRWNGYHGSTLAAT  165 (460)
T ss_pred             CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhh----CCCCCcEEEEECCCcCcccHhhh
Confidence            34445555668888763211       24899999999999999998653111    112 333332 334477766665


Q ss_pred             HHhCCC--------CCCeEEeeCCCC--CCCcc--------CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---
Q 010842          206 KLAGVS--------PANIRALPTSVD--ANFSL--------SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---  264 (499)
Q Consensus       206 ~~~G~g--------~~~v~~v~~~~~--~~~~~--------d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---  264 (499)
                      .+.|..        ...+..+|....  ..+.+        +.++|++.+.+..  ...+.+|++--.....|.+.|   
T Consensus       166 s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~--~~~iaavI~Epv~g~gG~~~~~~~  243 (460)
T PRK12403        166 ALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELG--AENVAGFVAEPFQGAGGMIFPPES  243 (460)
T ss_pred             hcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhC--CCceEEEEEccccCCCCCccCCHH
Confidence            554431        112344442210  00011        1345665554321  133555666555556688777   


Q ss_pred             -hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCc-
Q 010842          265 -VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDP-  341 (499)
Q Consensus       265 -l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~-  341 (499)
                       +++|.++|++||+.+++|.+++|+.....-+.....|+. .|.+++  -|.++..+ ..|.++++++  +.+.+.... 
T Consensus       244 yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~-PDiv~~--gK~lggG~~Piga~v~~~~--i~~~~~~~~~  318 (460)
T PRK12403        244 YWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFE-PDTLSI--AKGLTSGYVPMGGLVLSKR--IAEALVEQGG  318 (460)
T ss_pred             HHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCC-CCeEEE--cccccccccceEEEEECHH--HHHHHhcCCC
Confidence             999999999999999999999776432222221223554 688874  68887554 6777777643  223332111 


Q ss_pred             cCCCCCCCCCCCcccCCCcccCCCCCCCcHHH---HHHHHHhcHHHHHHHHHHHH-HHHHHHHHHHhc----CCCeEEEc
Q 010842          342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRL---WMVLRSYGVLNLQSHIRSDI-RLAKMFEGFVKS----DPRFEIVV  413 (499)
Q Consensus       342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~-~~a~~l~~~L~~----~~~~~~~~  413 (499)
                      .++..                 .+.....+.+   .++|+.+-.+.   .+++.. ++.++|.+.|++    .|-+.-+ 
T Consensus       319 ~~~~~-----------------~T~~gnPl~~Aaala~L~~i~~~~---l~~~~~~~~g~~l~~~L~~l~~~~~~i~~v-  377 (460)
T PRK12403        319 VFAHG-----------------LTYSGHPVAAAVAIANLKALRDEG---VVTRVKDDTGPYLQRCLREVFGDHPLVGEV-  377 (460)
T ss_pred             ccccC-----------------CCCCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhcCCCEEeE-
Confidence            11111                 1111223433   34444443333   345553 556666665543    3322111 


Q ss_pred             CCCceEEEEEecCCCCCCc--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          414 PRHFALVCFRLNPYPHSGS--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       414 ~~~~~~v~f~~~~~~~~~~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      .-...++.+.+........  .........+...+.++|.++...    + ..+|++.. ...|++||+++++++.++.+
T Consensus       378 rG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----~-~~~~l~Pp-l~it~~eid~~~~~l~~al~  451 (460)
T PRK12403        378 QGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST----L-GRMIMAPA-LVAGRAEIDELVDKTRIAVD  451 (460)
T ss_pred             eecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEec----C-CEEEEECC-CCCCHHHHHHHHHHHHHHHH
Confidence            1122334444432110000  001123445667778889554321    1 23787773 55799999999999999998


Q ss_pred             HHhcc
Q 010842          492 RLFKG  496 (499)
Q Consensus       492 ~l~~~  496 (499)
                      ++.++
T Consensus       452 ~~~~~  456 (460)
T PRK12403        452 RTARE  456 (460)
T ss_pred             HHHHH
Confidence            87654

>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]

Probab=99.49  E-value=1.1e-10  Score=117.08  Aligned_cols=317  Identities=12%  Similarity=0.059  Sum_probs=195.1

Q ss_pred             HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC---
Q 010842          133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG---  209 (499)
Q Consensus       133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G---  209 (499)
                      ++.+.|.+++.-+..      .-.+|+++||+||-.|+..||....        ...+|-....-|-...-++.+.|   
T Consensus       103 ~~ae~L~~~~p~~~~------~~~~f~~sGaeA~E~AiKiAr~~Tg--------r~~viaf~~afHG~T~galslT~~~~  168 (447)
T COG0160         103 ELAEKLTALAPGSGL------KKVFFGNSGAEAVEAAIKIARAYTG--------RPGVIAFDGAFHGRTLGALSLTGSKP  168 (447)
T ss_pred             HHHHHHHHhCCcccC------CeEEecCCcHHHHHHHHHHHHHHhC--------CCcEEEECCcccccchhhHHhccCcc
Confidence            334446666543211      1248999999999999999998752        22334445555766665555443   


Q ss_pred             -----CC--CCCeEEeeCCCC--CCC--------ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHH
Q 010842          210 -----VS--PANIRALPTSVD--ANF--------SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPL  268 (499)
Q Consensus       210 -----~g--~~~v~~v~~~~~--~~~--------~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I  268 (499)
                           .|  ...++.+|....  +.+        .-..+.+++.|.+.......|.++++--....-|.+.|    ++++
T Consensus       169 ~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l  248 (447)
T COG0160         169 PYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKAL  248 (447)
T ss_pred             ccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHH
Confidence                 22  124777876521  111        11334456656555555567888888887777888844    7999


Q ss_pred             HHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCC
Q 010842          269 AEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKP  348 (499)
Q Consensus       269 ~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~  348 (499)
                      .++|++||+.+++|.++.|+.....-+..-..|+ ..|.+|++  |.++.....|.++.|.+-.     ...+.-     
T Consensus       249 ~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv-~PDivt~a--K~ig~G~Pl~avv~r~ei~-----~~~~g~-----  315 (447)
T COG0160         249 RKLCREHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTLA--KSLGGGLPLSAVVGRAEIM-----DWPPGG-----  315 (447)
T ss_pred             HHHHHHcCCEEEEeccccCCCccccchhhhhcCC-CCCEEEec--ccccCCCceeEEeccHHhc-----ccCCcc-----
Confidence            9999999999999999998765443333334455 48999875  7777777788888776321     111100     


Q ss_pred             CCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcCCCc--eEEEEEec
Q 010842          349 SESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVPRHF--ALVCFRLN  425 (499)
Q Consensus       349 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~~--~~v~f~~~  425 (499)
                                   ..++-+...+.+.+++..+..-.-+.++++..++-+++.+.|.++. .+.++.+.+.  -.+.+.+.
T Consensus       316 -------------~~~Tf~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v  382 (447)
T COG0160         316 -------------HGGTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELV  382 (447)
T ss_pred             -------------cCCCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEe
Confidence                         1111222344444444444222222577778888888888887532 2334444321  23333333


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .+. .+.+...+...++.+++.++|.++.+....  .+++|+..- ...+++++|..++.|.++.++.
T Consensus       383 ~d~-~t~~p~~~~~~~i~~~~~~~Glil~~~G~~--~nviRi~PP-L~is~e~~d~~l~il~~al~~~  446 (447)
T COG0160         383 KDR-DTKEPDAELAAKIVARAFERGLLLLTCGPH--GNVLRILPP-LTISDEELDEGLDILEEALKEA  446 (447)
T ss_pred             cCC-CCCCCCHHHHHHHHHHHHHcCCEEeccCCC--CcEEEEeCC-cccCHHHHHHHHHHHHHHHHhh
Confidence            221 011122467889999999999866554322  367999883 6679999999999999987764

>PRK04612 argD acetylornithine transaminase protein; Provisional

Probab=99.48  E-value=1.9e-10  Score=117.21  Aligned_cols=306  Identities=11%  Similarity=0.070  Sum_probs=172.1

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc--CCe-EEEcCCCCchhHHHHH
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM--HKL-VVYGSDQTHSTFAKVC  205 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~--~~~-~i~~s~~~H~s~~ka~  205 (499)
                      ....++.+.|+++.+..+        ...|+++||+|+..|+..||......    |.  .+. +|......|-...-+.
T Consensus        82 ~~~~~la~~L~~~~~~~~--------~v~f~~sGseA~e~AlklAr~~~~~~----g~~~~r~~ii~~~~~yHG~t~~~~  149 (408)
T PRK04612         82 APPLKLAEELVTASRFAE--------KVFLCNSGTEANEAAIKLVRKWASSQ----GRPADKRVIVTFRGSFHGRTLAAV  149 (408)
T ss_pred             HHHHHHHHHHHhhCCCCC--------EEEEcCchHHHHHHHHHHHHHHHHhh----CCCCCCcEEEEECCCcCCccHHHH
Confidence            344455666777764322        24899999999999999999753211    21  133 3444444565544444


Q ss_pred             HHhCCCC---------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-C----ChhHHHHH
Q 010842          206 KLAGVSP---------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-D----NVEPLAEV  271 (499)
Q Consensus       206 ~~~G~g~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d----~l~~I~~i  271 (499)
                      ...|-..         ..++.+|.       -|++.|++.+..     ..+. .+..-|...+|.+ .    -+++|.++
T Consensus       150 s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~-----~~~a-avi~eP~~~~gg~~~~~~~~l~~l~~l  216 (408)
T PRK04612        150 TATAQPKYQEGYEPLPGGFRYVDF-------NDVEALEAAMAG-----GDVA-AVMLEPIQGEGGVMPAAPGFLARVRAL  216 (408)
T ss_pred             HhcCCcccccCCCCCCCCceEcCC-------CCHHHHHHhhCC-----CCEE-EEEECCccCCCCCcCCCHHHHHHHHHH
Confidence            4433210         01122221       278888887742     2233 4444444445544 3    28999999


Q ss_pred             HHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCC
Q 010842          272 ANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSES  351 (499)
Q Consensus       272 a~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~  351 (499)
                      |++||+++++|.+|.++.....-+.....++ ..|.+++  -|.++..+..|+++.+++  +.+.+...   . ..    
T Consensus       217 ~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~-~pdi~t~--~K~l~~G~piga~~~~~~--~~~~~~~~---~-~~----  283 (408)
T PRK04612        217 CDQHDALLVLDEIQCGMGRTGTLFAHWQEQV-TPDIVTL--AKALGGGFPIGAMLAGPK--VAETMQFG---A-HG----  283 (408)
T ss_pred             HHHcCCEEEEeccccCCCcCCchhhhhhcCC-CCCEEEE--cchhcCCCceEEEEECHH--HHhhhcCC---C-cC----
Confidence            9999999999999987433211111111122 2466655  688875566888877643  22333211   0 00    


Q ss_pred             CCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEc--CCCceEEEEEecCCC
Q 010842          352 NSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVV--PRHFALVCFRLNPYP  428 (499)
Q Consensus       352 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~--~~~~~~v~f~~~~~~  428 (499)
                              .+. .+.+..+.....+|..+-.   .++.++..++.+++.+.|+++. .+.++.  .....++.+.+.+..
T Consensus       284 --------~t~-~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~  351 (408)
T PRK04612        284 --------TTF-GGNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAH  351 (408)
T ss_pred             --------CCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCch
Confidence                    011 1222223333344444422   3566777777888888776642 122221  122334444443211


Q ss_pred             CCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842          429 HSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       429 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~  496 (499)
                             ......+.+.+.++|..+..    .+...+|++. +...|++||++++++|.+...++.++
T Consensus       352 -------~~~a~~i~~~l~~~Gvlv~~----~g~~~lRl~P-pl~it~eeid~~l~~l~~~l~~~~~~  407 (408)
T PRK04612        352 -------AGQAGAILDLAAEHGLLLLQ----AGPDVLRFVP-ALNLTDAELADGLARLRLALADYVAQ  407 (408)
T ss_pred             -------hhHHHHHHHHHHHCCeEEee----CCCCEEEEcC-CccCCHHHHHHHHHHHHHHHHHHhhc
Confidence                   12346677888888965432    2446799988 47789999999999999998877653

>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]

Probab=99.48  E-value=4.6e-11  Score=117.62  Aligned_cols=310  Identities=16%  Similarity=0.107  Sum_probs=184.7

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~  206 (499)
                      .+++|-++.+.++++++.-+-        .-|+++||||++.|++.||....        ++.+|-.....|-+.....-
T Consensus        91 Pte~Ei~~Aell~~~~p~~e~--------vrfvnSGTEAtmsAiRlARa~Tg--------R~kIikF~G~YHG~~D~~lv  154 (432)
T COG0001          91 PTELEVELAELLIERVPSIEK--------VRFVNSGTEATMSAIRLARAYTG--------RDKIIKFEGCYHGHSDSLLV  154 (432)
T ss_pred             CCHHHHHHHHHHHHhcCcccE--------EEEecchhHHHHHHHHHHHHhhC--------CCeEEEEcCCCCCCccHHHh
Confidence            367888888889999876332        37999999999999999997541        22233344555655444433


Q ss_pred             HhCCC----------------CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hh
Q 010842          207 LAGVS----------------PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VE  266 (499)
Q Consensus       207 ~~G~g----------------~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~  266 (499)
                      -.|-|                ...++.+|.+       |++.|++++++.   |..+.+|++--.-.+.|.|.|    ++
T Consensus       155 ~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-------D~~al~~~~~~~---g~~IAaVIvEPv~gn~g~i~p~~~Fl~  224 (432)
T COG0001         155 KAGSGAATLGSPSSPGVPADVAKHTLVLPYN-------DLEALEEAFEEY---GDDIAAVIVEPVAGNMGVVPPEPGFLE  224 (432)
T ss_pred             hcCcCcccCCCCCCCCCChhhhccEEEecCC-------CHHHHHHHHHHc---CCcEEEEEeccccCCCCCCCCCHHHHH
Confidence            32211                1134445543       899999998764   344566776666667888855    68


Q ss_pred             HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCC
Q 010842          267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLK  345 (499)
Q Consensus       267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~  345 (499)
                      ++.++|+++|+.|+.|...-|+-+.. .-.....|++ .|..|+  -|.++....+|++-.|.+ .+ +.+.. .+-|..
T Consensus       225 ~Lr~lt~e~G~lLI~DEViTGFR~~~-gGaq~~~gi~-PDlttl--GKiIGGGlP~ga~gGr~e-iM-~~~~p~g~vyqa  298 (432)
T COG0001         225 GLRELTEEHGALLIFDEVITGFRVAL-GGAQGYYGVE-PDLTTL--GKIIGGGLPIGAFGGRAE-IM-EQLAPLGPVYQA  298 (432)
T ss_pred             HHHHHHHHcCcEEEEecchhhcccCC-cccccccCcC-cchhhh--hhhhcCCcceeeeccHHH-HH-hhhCCCCCcccc
Confidence            89999999999999999987764321 1112233443 677765  588888888898877653 22 21111 111111


Q ss_pred             CCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcH-HH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEE
Q 010842          346 NKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGV-LN-LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALV  420 (499)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~-~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v  420 (499)
                                        ++-....+.+.+   +++.+-. ++ ++.+.+...++++-+.+.+.+. ++.+......+.+
T Consensus       299 ------------------GT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~~-g~~~~v~~~gsm~  359 (432)
T COG0001         299 ------------------GTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAERH-GIPLTVNRVGSMF  359 (432)
T ss_pred             ------------------CCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeeecceE
Confidence                              111223444443   4444432 22 4555444455555555555554 5544333334555


Q ss_pred             EEEecCCCCCC--c---chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          421 CFRLNPYPHSG--S---ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       421 ~f~~~~~~~~~--~---~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      ++.+.+.....  +   .+.. ...++...|.++|+ ++.+..+..      .+.+..+|++||++.++++.++.+++..
T Consensus       360 ~i~F~~~~~~n~~da~~sd~~-~~~~~~~~~l~~GV-~l~ps~~ea------~flS~ahte~di~~~~~a~~~~~~~~~~  431 (432)
T COG0001         360 GIFFTEEGVRNYADAKRSDVE-RFAKFFHHLLNRGV-YLAPSQFEA------GFLSTAHTEEDIDRTLEAADEAFKELAG  431 (432)
T ss_pred             EEEecCCCCCCHHHHHhhchH-HHHHHHHHHHhCCc-ccCCccccc------eeeecccCHHHHHHHHHHHHHHHHHhhc
Confidence            55554422111  0   1122 23445558888884 566654332      2234668999999999999998887754

>PRK08360 4-aminobutyrate aminotransferase; Provisional

Probab=99.47  E-value=4.6e-10  Score=115.46  Aligned_cols=320  Identities=12%  Similarity=0.058  Sum_probs=176.0

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      ..+.++.+.|+++++...+       ...|+++||||+..|+..||...       | ++.++-....-|-...-+....
T Consensus        84 ~~~~~la~~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~a~s~~  148 (443)
T PRK08360         84 VEPLLLAEKLIEIAPGDNP-------KVSFGLSGSDANDGAIKFARAYT-------K-RRKILSYLRSYYGSTYGAMSLT  148 (443)
T ss_pred             HHHHHHHHHHHHhCCCCCC-------EEEEcCCHHHHHHHHHHHHHHhc-------C-CCeEEEEeCCcCCcCHHHHHhc
Confidence            3445555668888754322       25899999999999999998652       1 2223333334455444444433


Q ss_pred             CCC---------CCCeEEeeCCCCCC--Cc--------cCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----h
Q 010842          209 GVS---------PANIRALPTSVDAN--FS--------LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----V  265 (499)
Q Consensus       209 G~g---------~~~v~~v~~~~~~~--~~--------~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l  265 (499)
                      |..         ...+..+|......  +.        -+.+.+++.++... .+..+.+|++.-..+++|.+-|    +
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iAAvi~eP~~~~~G~~~~~~~~l  227 (443)
T PRK08360        149 GLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEV-YAEGVAALFAEPIQGDAGMIVPPEDYF  227 (443)
T ss_pred             CCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhcc-CCCCeEEEEECCccCCCCCcCCCHHHH
Confidence            321         12345555432100  10        12344555554321 1234566666655578888754    8


Q ss_pred             hHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCC
Q 010842          266 EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLK  345 (499)
Q Consensus       266 ~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~  345 (499)
                      ++|.++|++||+++++|.+|.++.....-+.....++ ..|.+++  -|.++..+..|+++.+.+  +.+.+... .+. 
T Consensus       228 ~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~-~pDiitl--sK~l~~G~pigav~~~~~--i~~~~~~~-~~~-  300 (443)
T PRK08360        228 KKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGV-EPDIITL--GKPLGGGLPISATIGRAE--IMDSLPPL-AHA-  300 (443)
T ss_pred             HHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCC-CCCEEEe--cccccCCceeEEEEEcHH--HHhhhcCC-CCC-
Confidence            9999999999999999999987533221111111243 2577766  798886566888887643  22333210 000 


Q ss_pred             CCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEc--CCCceEEEE
Q 010842          346 NKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVV--PRHFALVCF  422 (499)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~--~~~~~~v~f  422 (499)
                                    .+. .+.+........++..+..+   +..++..++.+++.+.|+++. ...++.  .....++.+
T Consensus       301 --------------~T~-~~~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~gi  362 (443)
T PRK08360        301 --------------FTL-SGNPVASAAALAVIEEIEEK---NLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGV  362 (443)
T ss_pred             --------------CCC-CcCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEE
Confidence                          001 11111222333444444322   345666677777777765431 111121  123334444


Q ss_pred             EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          423 RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      .+..... ...........+..++.++|.++ .+.   +...+|++.. ..+|++||+++++++.++.+++.+
T Consensus       363 e~~~~~~-~~~~~~~~~~~~~~~l~~~Gi~~-~~~---~~~~lr~~P~-l~~t~~~id~~~~~l~~~l~~~~~  429 (443)
T PRK08360        363 DLVKDRE-TKERAYEEAAKVVWRAWELGLIV-TFF---SGNVLRIQPP-LTIEKEVLDEGLDILEEAIEDVEE  429 (443)
T ss_pred             EEecCCc-ccCccHHHHHHHHHHHHHCCeEE-eec---CCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence            4432110 00001233567888888999543 221   2356999884 788999999999999999887643

>PRK06058 4-aminobutyrate aminotransferase; Provisional

Probab=99.47  E-value=3e-10  Score=117.19  Aligned_cols=322  Identities=13%  Similarity=0.076  Sum_probs=174.7

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      .+...++.+.|++++.....      ...+|+++||+|+..|+..||...       | ++.+|.....-|-...-+..+
T Consensus        98 ~~~~~~la~~l~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~al~~  163 (443)
T PRK06058         98 YEGYVAVAEQLNRLTPGDHE------KRSALFNSGAEAVENAVKIARSYT-------G-RQAVVVFDHAYHGRTNLTMAL  163 (443)
T ss_pred             CHHHHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHhh-------C-CCeEEEECCCcCcChHHHHhh
Confidence            34555666778888753211      024889999999999999998652       1 222333444456555555443


Q ss_pred             hCC--------C--CCCeEEeeCCCC-CC---CccCH-HHHHHHHHHHHH--cCCccEEEEEecCCCcccccCC----hh
Q 010842          208 AGV--------S--PANIRALPTSVD-AN---FSLSP-QLLRRAVEADVE--AGLVPLFLCATVGTTSTTAVDN----VE  266 (499)
Q Consensus       208 ~G~--------g--~~~v~~v~~~~~-~~---~~~d~-~~L~~~i~~~~~--~g~~p~~vv~t~gtt~~G~id~----l~  266 (499)
                      .+.        +  ...+..+|.... ..   ...+. +.+++.++.-.+  .+..+.+|++.-.....|.+-|    ++
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~  243 (443)
T PRK06058        164 TAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLP  243 (443)
T ss_pred             cCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHH
Confidence            331        1  113344442210 00   01111 222222221111  1233555554444444455543    99


Q ss_pred             HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCC
Q 010842          267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKN  346 (499)
Q Consensus       267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~  346 (499)
                      +|.++|++||+.+++|.++.|+......+.....++ ..|.+++.  |.++..+..|+++.+++  +.+.+...  ..  
T Consensus       244 ~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv-~PDiv~~g--K~l~~G~Pi~av~~~~~--i~~~~~~~--~~--  314 (443)
T PRK06058        244 ALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGI-VPDLITTA--KGIAGGLPLSAVTGRAE--IMDAPHPG--GL--  314 (443)
T ss_pred             HHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCC-CCCEEEEc--ccccCCCccEEEEEcHH--HHhhccCC--CC--
Confidence            999999999999999999987643222222222344 36888884  98876677888888653  22222110  00  


Q ss_pred             CCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEc--CCCceEEEEE
Q 010842          347 KPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVV--PRHFALVCFR  423 (499)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~--~~~~~~v~f~  423 (499)
                                      ..+-....+...+++..+..-.-++..++..++.++|.+.|+++. ...++.  .....++.+.
T Consensus       315 ----------------~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~  378 (443)
T PRK06058        315 ----------------GGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIE  378 (443)
T ss_pred             ----------------CCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEEEE
Confidence                            011122344445554444211112456667777778887776631 122221  2333444555


Q ss_pred             ecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          424 LNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +.+..  ...........+.+.+.++|.++.....+ + .++|+... ...|++||++++++|.++.+++
T Consensus       379 ~~~~~--~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~-~-~~lr~~Pp-l~~t~~~i~~~~~~l~~~l~~~  443 (443)
T PRK06058        379 LVKPG--TTEPDAELTKALAAAAHAAGVIVLTCGTY-G-NVIRLLPP-LVIGDELLREGLDVLEAALADL  443 (443)
T ss_pred             EecCC--CCCCcHHHHHHHHHHHHHCCeEEeccCCC-C-CEEEEECC-CccCHHHHHHHHHHHHHHHHhC
Confidence            53321  00111245677888888999654322222 2 47999874 6789999999999999987653

>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase

Probab=99.46  E-value=2.8e-10  Score=116.24  Aligned_cols=311  Identities=14%  Similarity=0.073  Sum_probs=171.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEE-cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVI-QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~  206 (499)
                      ++...++.+.|++++..|...    .....| +++||||+..|+..||...       | ++.+|-....-|-...-+..
T Consensus        77 ~~~~~~lae~l~~~~~~~~~~----~~~~~f~~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~als  144 (412)
T TIGR02407        77 TEAKREFLETFNEIILKPRGL----DYKVQFPGPTGTNAVESALKLARKVT-------G-RSNVVSFTNAFHGMTLGSLS  144 (412)
T ss_pred             cHHHHHHHHHHHHhccCccCC----CceEEEeCCCchHHHHHHHHHHhhhc-------C-CCeEEEECCCcCCchHHHHH
Confidence            445555666677765222110    001245 5899999999999998652       1 22233344455655444444


Q ss_pred             HhCC-------C--CCCeEEeeCCCCCCC-ccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc----CChhHHHHHH
Q 010842          207 LAGV-------S--PANIRALPTSVDANF-SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----DNVEPLAEVA  272 (499)
Q Consensus       207 ~~G~-------g--~~~v~~v~~~~~~~~-~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d~l~~I~~ia  272 (499)
                      ..|.       |  ...+..+|....... .-+++.+++.+++.......+.+|++--...+.|.+    +-+++|.++|
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc  224 (412)
T TIGR02407       145 VTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLC  224 (412)
T ss_pred             hcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHH
Confidence            3321       1  124455554310000 124677888875432111234555555444556664    4489999999


Q ss_pred             HHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccC-CCcceEEEEeCchhHHHhhcCCccCCCCCCCCC
Q 010842          273 NEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLS-YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSES  351 (499)
Q Consensus       273 ~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~  351 (499)
                      ++||+++++|+++.|+......+.....++ ..|.++++  |+++. .+..|++++++..   ..+.  .. ...     
T Consensus       225 ~~~g~llI~DEV~tG~GRtG~~~a~~~~~v-~PDi~~~~--K~lg~~G~pigav~~~~~~---~~~~--~~-~~~-----  290 (412)
T TIGR02407       225 RRHDILLIVDDIQAGCGRTGTFFSFEPAGI-EPDIVCLS--KSISGYGLPLALTLIKPEL---DVWK--PG-EHN-----  290 (412)
T ss_pred             HHcCCEEEEechhhCCCccchhHHhcccCC-CCCEEEec--hhccCCccceeEEEEchhh---hccC--CC-ccC-----
Confidence            999999999999986532211111112344 37888775  99876 6778999987642   2221  00 000     


Q ss_pred             CCcccCCCcccCCCCCCCcH---HHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEcCCCceEEEEE
Q 010842          352 NSVVDFKDWQVGTGRRFKSL---RLWMVLRS-YGVLNLQSHIRSDIRLAKMFEGFVK----SDPRFEIVVPRHFALVCFR  423 (499)
Q Consensus       352 ~~~~~~~~~~~~~sr~~~al---~~~~~l~~-~g~~g~~~~~~~~~~~a~~l~~~L~----~~~~~~~~~~~~~~~v~f~  423 (499)
                                  .+-....+   ...+++.. +..+.   ..++..++.+++.+.|+    ..|++..-......++.+.
T Consensus       291 ------------~T~~gnpl~~aaa~a~l~~~i~~~~---l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~  355 (412)
T TIGR02407       291 ------------GTFRGNNLAFVTATAALEYYWSDDA---FEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIE  355 (412)
T ss_pred             ------------CCCCccHHHHHHHHHHHHHHhcccH---HHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEE
Confidence                        01111233   23444553 33333   34445555566655554    3443321112223344555


Q ss_pred             ecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          424 LNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      +.+         .....++.+.+.++|..+. +... +...+|++. ....|++|+++++++|.+..+
T Consensus       356 l~~---------~~~~~~~~~~~~~~Gv~v~-~~~~-~~~~lr~~p-~l~~t~~~i~~~~~~l~~~l~  411 (412)
T TIGR02407       356 CGD---------GDLAGKIAKAAFENGLIIE-TSGP-NDEVIKLLP-PLTIDEETLQQGLDILEQAVE  411 (412)
T ss_pred             ecC---------hHHHHHHHHHHHHCCCEEe-ccCC-CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHh
Confidence            543         2345678888889996543 2211 235699998 488999999999999998764

Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.

>PRK06541 hypothetical protein; Provisional

Probab=99.45  E-value=5.1e-10  Score=115.66  Aligned_cols=331  Identities=11%  Similarity=0.029  Sum_probs=179.1

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      ....++.+.|++++.-+.+       ...|+++||+|+..|+..||...... +..+ +..+|......|-...-+....
T Consensus        95 ~~~~~la~~l~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~a~s~~  165 (460)
T PRK06541         95 PPAIELAERLAALAPGDLN-------RVFFTTGGSEAVESAWKLAKQYFKLT-GKPG-KHKVISRAIAYHGTTQGALAIT  165 (460)
T ss_pred             HHHHHHHHHHHHhCCCCcC-------EEEEcCCcHHHHHHHHHHHHHHHHhc-CCCC-ccEEEEEcCcccCcchhhhcCc
Confidence            3444455557777642211       34899999999999999998753211 0000 1223344444565544444333


Q ss_pred             CCC---------CCCeEEeeCCCCCC---CccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----
Q 010842          209 GVS---------PANIRALPTSVDAN---FSLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----  264 (499)
Q Consensus       209 G~g---------~~~v~~v~~~~~~~---~~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----  264 (499)
                      |..         ...+..+|...--.   +.-+        ++.|++.++..  ....+.+|++.-...+.|.+-|    
T Consensus       166 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~Aavi~EPv~g~~G~~~~~~~y  243 (460)
T PRK06541        166 GLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE--GPDTVAAVFLEPVQNAGGCFPPPPGY  243 (460)
T ss_pred             CChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHH
Confidence            221         11234454331000   1112        25566666431  1234555555555677888888    


Q ss_pred             hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCc-c
Q 010842          265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDP-E  342 (499)
Q Consensus       265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~-~  342 (499)
                      +++|.++|++||+.+++|.++.|+.....-+.....++ ..|.+++  -|.++..+ ..|.++.+++. . ..+.... .
T Consensus       244 l~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv-~PDivt~--gK~l~~G~~pigav~~~~~i-~-~~~~~~~~~  318 (460)
T PRK06541        244 FERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGY-VPDIITC--AKGITSGYSPLGAMIASDRL-F-EPFLDGPTM  318 (460)
T ss_pred             HHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCC-CCCEEEe--cccccCCccceeEEEEcHHH-H-HHhhcCCCc
Confidence            99999999999999999999965532222111112344 3787774  68887544 57888776542 2 2222111 1


Q ss_pred             CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc--CCCceEE
Q 010842          343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV--PRHFALV  420 (499)
Q Consensus       343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~--~~~~~~v  420 (499)
                      ++..                 .+.....+.+.+++..+..-.-+...++..++.++|.+.|+++....++.  .....++
T Consensus       319 ~~~~-----------------~T~~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~  381 (460)
T PRK06541        319 FLHG-----------------YTFGGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFY  381 (460)
T ss_pred             cccC-----------------CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEE
Confidence            1110                 11112234444444443211112355777788888888887753222211  1222334


Q ss_pred             EEEecCCCC----CCcchhHH-HHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          421 CFRLNPYPH----SGSADTEM-LNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       421 ~f~~~~~~~----~~~~~~~~-~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      .+.+.....    ......+. ....+.+.+.++|.++ .+. ..+...+|++.. ..+|++|||+++++|.++..++.+
T Consensus       382 ~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~-~~~-~~g~~~lrl~Pp-l~~t~~~id~~~~~l~~~l~~~~~  458 (460)
T PRK06541        382 GIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYC-RAD-DRGDPVVQLAPP-LISGQEEFDEIEQILRSVLTEAWA  458 (460)
T ss_pred             EEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEE-Eec-CCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence            444432110    00111111 2246778888888543 332 124467999884 778999999999999999887654

>PRK08088 4-aminobutyrate aminotransferase; Validated

Probab=99.45  E-value=2.7e-10  Score=117.16  Aligned_cols=317  Identities=13%  Similarity=0.088  Sum_probs=171.7

Q ss_pred             HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC
Q 010842          130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG  209 (499)
Q Consensus       130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G  209 (499)
                      ...++.++|++..+.+..      ...+++++|++|+..|+..+|....        ++.+|.++..-|-...-+....+
T Consensus        85 ~~~~la~~l~~~~~~~~~------~~~~f~~sGsea~e~Alklar~~~~--------r~~iv~~~~~yHG~~~~~~~~~~  150 (425)
T PRK08088         85 PYLELCEKMNQKVPGDFA------KKTLLVTTGSEAVENAVKIARAATK--------RSGVIAFTGAYHGRTHYTLALTG  150 (425)
T ss_pred             HHHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHHhC--------CCeEEEECCccCCccHHHHHhhC
Confidence            334666778887764321      1248899999999999999986531        23345556556666544433322


Q ss_pred             C--------C--CCCeEEe--eCCCCCCCcc--CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHH
Q 010842          210 V--------S--PANIRAL--PTSVDANFSL--SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEV  271 (499)
Q Consensus       210 ~--------g--~~~v~~v--~~~~~~~~~~--d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~i  271 (499)
                      -        +  ...+..+  |.+.++ ...  +++.|++.++... .+..+.+|++.-.....|.+-+    +++|.++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~l~~~l~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l  228 (425)
T PRK08088        151 KVNPYSAGMGLMPGHVYRALYPCPLHG-VSEDDAIASIERIFKNDA-APEDIAAIIIEPVQGEGGFYAASPAFMQRLRAL  228 (425)
T ss_pred             CCCccccCCCCCCCCcEEcCCCccccC-ccHHHHHHHHHHHHHhcc-CCCceEEEEECcccCCCCCcCCCHHHHHHHHHH
Confidence            1        0  1122222  222211 111  1456777775321 2234555555554455566655    8999999


Q ss_pred             HHHhCCEEEeeccccchhccCccchhh-hcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCC
Q 010842          272 ANEYGIWVHVDAAYAGSACICPEFRHY-LNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSE  350 (499)
Q Consensus       272 a~~~~~~lhvD~A~g~~~~~~~~~~~~-~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~  350 (499)
                      |++||+++++|.+|+++... +..... ..++ ..|.  .+.-|.++..+..|+++.+.+  +.+.+.... +  .    
T Consensus       229 ~~~~~~~lI~Dev~~g~g~~-g~~~~~~~~~~-~pdi--~s~sK~l~~G~rig~v~~~~~--~~~~~~~~~-~--~----  295 (425)
T PRK08088        229 CDEHGIMLIADEVQTGAGRT-GTLFAMEQMGV-AADL--TTFAKSIAGGFPLAGVTGRAE--VMDAIAPGG-L--G----  295 (425)
T ss_pred             HHHcCCEEEEeccccCCCcC-cchhHHhhcCC-CCCE--EEEeccccCCCcceeeEecHH--HHhhcCCCC-C--C----
Confidence            99999999999999874322 111110 1222 2454  445799876677888887543  222222110 0  0    


Q ss_pred             CCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEcCCCceEEEEEecC
Q 010842          351 SNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVK----SDPRFEIVVPRHFALVCFRLNP  426 (499)
Q Consensus       351 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~----~~~~~~~~~~~~~~~v~f~~~~  426 (499)
                                   .+-....+...+++..+..-..++.+++..++.+++.+.|.    ..|.+.-+..+ ...+.+.+..
T Consensus       296 -------------~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~~~l~l~~  361 (425)
T PRK08088        296 -------------GTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFE  361 (425)
T ss_pred             -------------CCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEecc-ceEEEEEEec
Confidence                         01111234444444443222223444455555555554443    34443333223 3345555532


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       427 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ... ...........+..++.++|..+.....+  ..++|+++. ...|+++|++.++.|.++..++
T Consensus       362 ~~~-~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~iRl~~~-~~~t~~ei~~~i~~l~~~l~~~  424 (425)
T PRK08088        362 DGD-HSKPNAKLTAQIVARARDKGLILLSCGPY--YNVLRILVP-LTIEDAQIRQGLEIIAQCFDEA  424 (425)
T ss_pred             CCC-CCCCCHHHHHHHHHHHHhCCCEEecCCCC--CCEEEEECC-CCcCHHHHHHHHHHHHHHHHhh
Confidence            110 00001244677888888999765432222  257999994 6788999999999999987653

>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase

Probab=99.45  E-value=5.4e-11  Score=122.45  Aligned_cols=308  Identities=14%  Similarity=0.076  Sum_probs=157.9

Q ss_pred             HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC-CchhHHHHHHHhCC
Q 010842          132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ-THSTFAKVCKLAGV  210 (499)
Q Consensus       132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~-~H~s~~ka~~~~G~  210 (499)
                      .++.+.+++.+...+.        .++++|||+|+..|+..||...         ++..|++... -|-....+....+.
T Consensus        91 ~~lae~l~~~~~~~~~--------v~~~~sGseA~e~Alk~ar~~~---------gr~~ii~~~~~yhG~~~~~~~~~~~  153 (423)
T TIGR00713        91 ILLAKEIISRVPSVEM--------VRFVNSGTEATMSAVRLARGYT---------GRDKIIKFEGCYHGHHDALLVKAGS  153 (423)
T ss_pred             HHHHHHHHHhCCcccE--------EEEeCCHHHHHHHHHHHHHHhh---------CCCEEEEEcCCCCCChhhhhccccC
Confidence            3344446666643332        4899999999999999998753         2233444444 44433322222121


Q ss_pred             CCCCeEEeeCCCC-------CCC---ccCHHHHHHHHHHHHHcCCccEEEEEe-cCCCcccccCC----hhHHHHHHHHh
Q 010842          211 SPANIRALPTSVD-------ANF---SLSPQLLRRAVEADVEAGLVPLFLCAT-VGTTSTTAVDN----VEPLAEVANEY  275 (499)
Q Consensus       211 g~~~v~~v~~~~~-------~~~---~~d~~~L~~~i~~~~~~g~~p~~vv~t-~gtt~~G~id~----l~~I~~ia~~~  275 (499)
                      |... ...|..+.       ..+   ..|+++|++.+++.   +..+.+|++. ..++ +|.+.|    +++|.++|++|
T Consensus       154 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~---~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~  228 (423)
T TIGR00713       154 GAAT-LGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEY---GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEY  228 (423)
T ss_pred             cccc-cCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHc---CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHh
Confidence            1101 00010000       000   12899999988632   2234455554 4444 788866    79999999999


Q ss_pred             CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842          276 GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV  355 (499)
Q Consensus       276 ~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  355 (499)
                      |+++++|.+|.++ ...........++ ..|.++  .-|.++..+..|+++.+++  +.+.+.....+...         
T Consensus       229 ~~llI~DEv~~g~-r~g~~~~~~~~~~-~pDi~t--~sK~l~~G~pig~v~~~~~--i~~~~~~~~~~~~~---------  293 (423)
T TIGR00713       229 GSLLIFDEVMTGF-RVALGGAQEYFGV-EPDLTT--LGKIIGGGLPVGAFGGRRE--IMERLAPEGPVYQA---------  293 (423)
T ss_pred             CCEEEEEcccccc-ccCcchhHHHhCC-Ccchhh--hhhhhcCCCceeeeeEHHH--HHHhhCcCCCeeec---------
Confidence            9999999999776 3211111112233 256554  5788875566788877643  22333211000000         


Q ss_pred             cCCCcccCCCCCCCcHHHHH---HHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCC
Q 010842          356 DFKDWQVGTGRRFKSLRLWM---VLRSYGVLN-LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSG  431 (499)
Q Consensus       356 ~~~~~~~~~sr~~~al~~~~---~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~  431 (499)
                              .+-....+.+.+   ++..+..++ ++...+....+.+.+.+.+++. ++..-......++.+.+.......
T Consensus       294 --------~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~g~~~~v~~~~~~~~~  364 (423)
T TIGR00713       294 --------GTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDT-GIPHTVNRVGSMFSLFFTEEEVTN  364 (423)
T ss_pred             --------cCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEeeccEEEEEEecCCCCC
Confidence                    011112333333   444432222 2333333333444455555555 332211122234443333211000


Q ss_pred             --c--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          432 --S--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       432 --~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                        +  ..-......+.+.+.++|.+ +.+..   ...+|++..   .|++||++++++|.++.++
T Consensus       365 ~~~~~~~~~~~~~~~~~~l~~~Gv~-v~~~~---~~~~~l~~~---~t~~~i~~~~~~l~~~l~~  422 (423)
T TIGR00713       365 YADAKKSDTELFAKFFHEMLDKGVF-LPPSQ---FEACFLSAA---HTEEDIENTIEAAEEVFAE  422 (423)
T ss_pred             hhhhhcccHHHHHHHHHHHHHCCeE-EecCC---ccceeeECC---CCHHHHHHHHHHHHHHHhh
Confidence              0  00012345678888888854 44322   234777653   6899999999999988765

This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.

>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]

Probab=99.45  E-value=1.4e-11  Score=120.38  Aligned_cols=220  Identities=16%  Similarity=0.167  Sum_probs=157.5

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch---
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS---  199 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~---  199 (499)
                      ..|-...+|..    ++++-|.+..         +.+++|..|...++.....           .+..|++....+.   
T Consensus        75 ~nPt~~~le~~----iaal~ga~~~---------l~fsSGmaA~~~al~~L~~-----------~g~~iV~~~~~Y~gT~  130 (409)
T KOG0053|consen   75 GNPTRDVLESG----IAALEGAAHA---------LLFSSGMAAITVALLHLLP-----------AGDHIVATGDVYGGTL  130 (409)
T ss_pred             CCCchHHHHHH----HHHHhCCceE---------EEecccHHHHHHHHHHhcC-----------CCCcEEEeCCCcccHH
Confidence            35666777777    8999988764         7888887777777776542           3445555544443   


Q ss_pred             -hHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          200 -TFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       200 -s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                       -+.+....+|+   ....++++       |++++++++.++++      +|..-.|+||++.+-||++|+++||++|+.
T Consensus       131 ~~l~~~~~~~gi---e~~~vd~~-------~~~~~~~~i~~~t~------~V~~ESPsNPll~v~DI~~l~~la~~~g~~  194 (409)
T KOG0053|consen  131 RILRKFLPKFGG---EGDFVDVD-------DLKKILKAIKENTK------AVFLESPSNPLLKVPDIEKLARLAHKYGFL  194 (409)
T ss_pred             HHHHHHHHHhCc---eeeeechh-------hHHHHHHhhccCce------EEEEECCCCCccccccHHHHHHHHhhCCCE
Confidence             35555667788   77777654       67888888888665      899999999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      ++||..+++.... +   .+--   +||.++-+..||+++.-.  .|++..+..+..++..... .++            
T Consensus       195 vvVDnTf~~p~~~-~---pL~l---GADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~-~~l------------  254 (409)
T KOG0053|consen  195 VVVDNTFGSPYNQ-D---PLPL---GADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQ-EDL------------  254 (409)
T ss_pred             EEEeCCcCccccc-C---hhhc---CCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHH-HHh------------
Confidence            9999999887332 1   1212   399999999999987644  5666666444332222111 122            


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                              +.-..++.+|..+|-+  +.+.-++++..+++..+++.|++.|.++-+
T Consensus       255 --------g~~~~p~~~~ll~Rgl--ktl~lRi~~~~ena~~~A~~Le~~~~v~kv  300 (409)
T KOG0053|consen  255 --------GWCEDPFDLFLLSRGL--KTLHLRINKHSENALKIALLLEAHPKVKKV  300 (409)
T ss_pred             --------cCCCCHHHHHHHhcCc--chhhhhHHHHHHHHHHHHHHhhhCCceeEE
Confidence                    2223466777766644  666778889999999999999999888733

>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated

Probab=99.43  E-value=9.8e-11  Score=116.21  Aligned_cols=331  Identities=12%  Similarity=0.047  Sum_probs=184.9

Q ss_pred             CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC
Q 010842          117 VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ  196 (499)
Q Consensus       117 ~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~  196 (499)
                      .-..|..+|....||+.    ++++||++..         ++|..|+.++..+..+.......+.   |.....-+++..
T Consensus        66 GDD~Y~gdpSv~~Lee~----vael~G~E~a---------lpthqGRgaE~Il~~~~~~~~g~e~---g~~~~~~~v~hn  129 (467)
T TIGR02617        66 GDEAYSGSRSYYALAES----VKNIFGYQYT---------IPTHQGRGAEQIYIPVLIKKREQEK---GLDRSKMVAFSN  129 (467)
T ss_pred             CCcccccCchHHHHHHH----HHHHhCCceE---------EECCCCchHHHHHHHhhcccccccc---cccccccccceE
Confidence            34578899999999988    8889999864         8898889998887765532100000   000001133445


Q ss_pred             CchhHH-HHHHHhCCCCCCeEEeeCC--------CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC-ccccc---C
Q 010842          197 THSTFA-KVCKLAGVSPANIRALPTS--------VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT-STTAV---D  263 (499)
Q Consensus       197 ~H~s~~-ka~~~~G~g~~~v~~v~~~--------~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt-~~G~i---d  263 (499)
                      .|+-.. -.+.+.|.   .++.++.+        ..-.+.+|+++|+++|++... ...++ +..+..+| .-|.+   +
T Consensus       130 ~~fett~g~a~l~G~---~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~-~~i~~-v~~tlt~N~~GGqpvsle  204 (467)
T TIGR02617       130 YFFDTTQGHSQINGC---TARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP-NNVPY-IVATITCNSAGGQPVSLA  204 (467)
T ss_pred             EEEecchHHHHHcCc---eeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC-CCcee-eeeeEEEecCCCEEeCHH
Confidence            566543 45667787   66665432        111248999999999976421 12333 33333233 34544   6


Q ss_pred             ChhHHHHHHHHhCCEEEeeccccch-hccCcc---------chhhh-cCCCCCceeEecccccccCCCcceEEEEeCc--
Q 010842          264 NVEPLAEVANEYGIWVHVDAAYAGS-ACICPE---------FRHYL-NGIERVDSFSFSPHKWLLSYLDCCCLWVKQP--  330 (499)
Q Consensus       264 ~l~~I~~ia~~~~~~lhvD~A~g~~-~~~~~~---------~~~~~-~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~--  330 (499)
                      .+.++.++|++||+.+|.|||--.- +.+...         .+... .-...+|+++++..|.+++|.| |++..+++  
T Consensus       205 nlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvG-g~Lag~d~~~  283 (467)
T TIGR02617       205 NLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMG-GLLCFKDDSF  283 (467)
T ss_pred             HHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCccc-ceEEecchhH
Confidence            6788999999999999999974221 211100         01111 0124699999999999999965 55666666  


Q ss_pred             -hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHH-HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010842          331 -GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRL-WMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR  408 (499)
Q Consensus       331 -~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~-~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~  408 (499)
                       +.+.+.-.....|=           .+..|+   |...+-+.. ...|.-   .--..++++.....+||.+.|.+. |
T Consensus       284 ~~l~~~~~~~~i~~E-----------Gf~tYG---Glagrd~ea~a~Gl~e---~~~~~yl~~ri~qv~yl~~~L~~~-G  345 (467)
T TIGR02617       284 FDVYTECRTLCVVQE-----------GFPTYG---GLEGGAMERLAVGLYD---GMNLDWLAYRINQVQYLVNGLEEI-G  345 (467)
T ss_pred             HHHHHHHHhhccccc-----------CCcCcC---chhHHHHHHHHhhhhh---cccHHHHHHHHHHHHHHHHHHHhC-C
Confidence             43333222222111           111121   211121211 112221   122466777788889999999886 7


Q ss_pred             eEEEcCCCceEEEEE---ecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeE-------C------CEEEEEEeccC
Q 010842          409 FEIVVPRHFALVCFR---LNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIV-------G------GLYMLRFAVGA  471 (499)
Q Consensus       409 ~~~~~~~~~~~v~f~---~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~-------~------g~~~lRi~~~~  471 (499)
                      +.++. +...-|.+.   +.|.-+.    ...-.+.|...|. +.|+=-+--+.+       .      .-..+|+++--
T Consensus       346 vpi~~-~Gghav~iDa~~~lphip~----~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipR  420 (467)
T TIGR02617       346 VVCQQ-AGGHAAFVDAGKLLPHIPA----DQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPR  420 (467)
T ss_pred             CcEEe-cCccEEEEehhhhCCCCCh----hhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeecccc
Confidence            77765 443333231   1111000    0112344544443 334311111111       1      12579999853


Q ss_pred             CCCcHHHHHHHHHHHHHHHHH
Q 010842          472 SLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       472 ~~~t~~di~~l~~~l~~~~~~  492 (499)
                      -.-|.+++|.+.+++..+.++
T Consensus       421 rvyt~~h~d~v~~~~~~~~~~  441 (467)
T TIGR02617       421 ATYTQTHMDFIIEAFKHVKEN  441 (467)
T ss_pred             ccccHhHHHHHHHHHHHHHhh
Confidence            344899999999999988764

Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.

>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type

Probab=99.43  E-value=1.1e-09  Score=112.32  Aligned_cols=311  Identities=15%  Similarity=0.082  Sum_probs=170.3

Q ss_pred             HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC-
Q 010842          131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG-  209 (499)
Q Consensus       131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G-  209 (499)
                      +.++.+.|++++.-+..      ...+|+++||+|+..|+..||...       | ++.+|.....-|-...-++.+.| 
T Consensus        78 ~~~la~~l~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~~~~~~  143 (420)
T TIGR00700        78 YVALAEKLNRIAPGSGP------KKSVFFNSGAEAVENAVKIARSYT-------G-RPGVVAFDHGFHGRTNMTMALTAK  143 (420)
T ss_pred             HHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHhc-------C-CCcEEEECCCcCCCcHHHHHhcCC
Confidence            34455567777632110      124899999999999999998752       1 22234445555655544444322 


Q ss_pred             -------CC--CCCeEEeeCCCCC---------CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhH
Q 010842          210 -------VS--PANIRALPTSVDA---------NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEP  267 (499)
Q Consensus       210 -------~g--~~~v~~v~~~~~~---------~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~  267 (499)
                             .+  ...+..+|.....         .+.-+++.+++.+.... .+..+.+|++--....+|.+-|    +++
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~Epi~g~~G~~~~~~~~l~~  222 (420)
T TIGR00700       144 VMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDV-GANNVAALVIEPVQGEGGFIVPAKGFVPA  222 (420)
T ss_pred             CcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhc-CCCcEEEEEECCccCCCCCccCCHHHHHH
Confidence                   11  1234445442100         00112456666654211 2234556666655556777755    899


Q ss_pred             HHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCC
Q 010842          268 LAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNK  347 (499)
Q Consensus       268 I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~  347 (499)
                      |.++|++||+++++|.+|.++.....-+.....++ ..|.++  .-|.++..+..|+++.+++  +.+.+...  ..   
T Consensus       223 l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~-~pDi~~--lsK~l~~G~pig~v~~~~~--i~~~~~~~--~~---  292 (420)
T TIGR00700       223 LLDWCREHGIVFIADEVQTGFARTGAMFACEHEGP-EPDLIT--TAKSLADGLPLSGVTGRAE--IMDAPAPG--GL---  292 (420)
T ss_pred             HHHHHHHcCCEEEEEecccCCcccchhHHHhhcCC-CCCEEE--eeccccCCcceEEEEecHH--HHhhcCCC--Cc---
Confidence            99999999999999999987643221111111232 377666  5788876677888887653  22222210  00   


Q ss_pred             CCCCCCcccCCCcccCCCCCCCcHHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEcCCCceEE
Q 010842          348 PSESNSVVDFKDWQVGTGRRFKSLRLWMV---LRSYGVLNLQSHIRSDIRLAKMFEGFVK----SDPRFEIVVPRHFALV  420 (499)
Q Consensus       348 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~----~~~~~~~~~~~~~~~v  420 (499)
                                     ..+-....+...++   +..+..+.+.   ++..++.+++.+.|+    ..|.+.-+ .+...++
T Consensus       293 ---------------~~T~~~~pl~~aaa~a~l~~l~~~~~~---~~~~~~g~~l~~~L~~l~~~~~~~~~v-rg~G~~~  353 (420)
T TIGR00700       293 ---------------GGTYAGNPLACAAALAVLAIIESEGLI---ERARQIGRLVTDRLTTLKAVDPRIGDV-RGLGAMI  353 (420)
T ss_pred             ---------------CCCCCcCHHHHHHHHHHHHHHHhccHH---HHHHHHHHHHHHHHHHHHhhCCCEEEe-eccceEE
Confidence                           00111224444444   4444444433   333444444444443    34444333 2334455


Q ss_pred             EEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          421 CFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       421 ~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      .+.+.+..  ..........++.+.+.++|..+.....+ + .++|+++. ...++++|++++++|.++.
T Consensus       354 ~i~~~~~~--~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f-~-~~lRl~p~-l~~~~~~l~~~~~~l~~~l  418 (420)
T TIGR00700       354 AVELVDPG--TTEPDAGLAERIATAAHAAGLLLLTCGMF-G-NIIRFLPP-LTIGDELLSEGLDILCAIL  418 (420)
T ss_pred             EEEEecCC--CCCccHHHHHHHHHHHHHCCeEEeccCCC-C-CEEEEECC-CCcCHHHHHHHHHHHHHHh
Confidence            55553221  00112345677888888899665443322 2 57999873 4478999999999998875

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PLN00144 acetylornithine transaminase

Probab=99.41  E-value=7.4e-10  Score=112.11  Aligned_cols=300  Identities=15%  Similarity=0.076  Sum_probs=165.7

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-----CCeEEEcCCCCchhHHH
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-----HKLVVYGSDQTHSTFAK  203 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-----~~~~i~~s~~~H~s~~k  203 (499)
                      ..+.++.+.|+++.+.+.         ..++++||||+..|+..||..........+.     +..+|......|-...-
T Consensus        57 ~~~~~la~~l~~~~~~~~---------v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~  127 (382)
T PLN00144         57 IPQVELAKRLVASSFADR---------VFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLG  127 (382)
T ss_pred             HHHHHHHHHHHhcCCCCe---------EEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHH
Confidence            344455566777664332         4899999999999999998753221000000     12234445455655444


Q ss_pred             HHHHhCCC---------CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc--CC--hhHHHH
Q 010842          204 VCKLAGVS---------PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV--DN--VEPLAE  270 (499)
Q Consensus       204 a~~~~G~g---------~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i--d~--l~~I~~  270 (499)
                      +....+-.         ...+..+|.       -|+++|++.+..     ..+.+|++.-..++.|.+  ++  +++|.+
T Consensus       128 ~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~-----~~~aavi~eP~q~~gg~~~~~~~~~~~l~~  195 (382)
T PLN00144        128 ALALTSKEQYRTPFEPLMPGVTFVEY-------GNLEAARKLIQK-----GKTAAVFVEPVQGEGGIYPATKEFLQGLRA  195 (382)
T ss_pred             HHhcCCCccccccCCCCCCCeEEeCC-------CCHHHHHHhcCC-----CCeEEEEEccccCCCCCccCCHHHHHHHHH
Confidence            44433321         112233332       178899887742     234455555445554443  44  899999


Q ss_pred             HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCC
Q 010842          271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSE  350 (499)
Q Consensus       271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~  350 (499)
                      +|++||+++++|.++.++......+.....++. .|.+++  -|.++..+..|+++.+++  +.+.+...   ..     
T Consensus       196 l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~-PDi~t~--sK~l~~G~pig~v~~~~~--~~~~~~~~---~~-----  262 (382)
T PLN00144        196 LCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVE-PDIMTL--AKPLAGGLPIGAVLVTEK--VASAINPG---DH-----  262 (382)
T ss_pred             HHHHcCCEEEEechhhCCCccchHhhhhhcCCC-CCEEEe--cccccCCcceEEEEEcHH--HHhccCCC---CC-----
Confidence            999999999999999876432211111123442 675554  698876677888888643  22222110   00     


Q ss_pred             CCCcccCCCcccCCCCCCCcHHH---HHHHHHhcHHHHHHHHHHHHHHHHHHHH----HHhcCCCeEEEcCCCceEEEEE
Q 010842          351 SNSVVDFKDWQVGTGRRFKSLRL---WMVLRSYGVLNLQSHIRSDIRLAKMFEG----FVKSDPRFEIVVPRHFALVCFR  423 (499)
Q Consensus       351 ~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~~~a~~l~~----~L~~~~~~~~~~~~~~~~v~f~  423 (499)
                                  ..+.....+.+   .+++..+-...+.   ++..++.+++.+    .+.+.|.+.-+.. ....+.+.
T Consensus       263 ------------~~T~~~~pl~~aaa~a~l~~i~~~~~~---~~~~~~g~~l~~~l~~~~~~~~~~~~vrg-~G~~~~l~  326 (382)
T PLN00144        263 ------------GSTFAGGPLVCNAALAVLDKISKPGFL---ASVAKKGEYLRELLRRKLGGNPHVKEVRG-VGLLVGIQ  326 (382)
T ss_pred             ------------CCCCCCCHHHHHHHHHHHHHHhhchHH---HHHHHHHHHHHHHHHHHHhhCCCceeeec-CceEEEEE
Confidence                        01111223333   3444555333333   334444444444    4444543322212 33344445


Q ss_pred             ecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          424 LNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +...           ...+...+.++|..+...   ....++|+++. ...++++|+.+++.|.++..++
T Consensus       327 l~~~-----------~~~~~~~~~~~Gv~i~~~---~~~~~lrl~p~-~~~~~~~i~~~~~~l~~~l~~~  381 (382)
T PLN00144        327 LDVP-----------AGPLVDACRDSGLLVLTA---GKGDVVRLVPP-LVISEAELEQAVEILADCLPAL  381 (382)
T ss_pred             ecCc-----------cHHHHHHHHHCCeEEeec---CCCCEEEEeCC-CccCHHHHHHHHHHHHHHHHhc
Confidence            4211           246778888889654332   11367999984 5578999999999999987653

>PRK07678 aminotransferase; Validated

Probab=99.41  E-value=1.9e-09  Score=111.25  Aligned_cols=327  Identities=13%  Similarity=0.075  Sum_probs=175.0

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      +.+.++.+.|+++++....        ..|+++||+|+..|+..||...... +..+ ++.+|-.....|-...-+....
T Consensus        89 ~~~~~lae~l~~~~~~~~~--------v~f~~sGseA~e~AlklAr~~t~~~-g~~~-r~~ii~~~~~yHG~t~~als~~  158 (451)
T PRK07678         89 EPAIKLAEKLNEWLGGEYV--------IFFSNSGSEANETAFKIARQYHAQK-GEPH-RYKFISRYRAYHGNSMGALAAT  158 (451)
T ss_pred             HHHHHHHHHHHHhCCCCCE--------EEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCccHHHhhcC
Confidence            3444556668887754322        4899999999999999999754211 1001 1223333444565544444333


Q ss_pred             CCC---------CCCeEEeeCCCCCCCcc---------CH---HHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---
Q 010842          209 GVS---------PANIRALPTSVDANFSL---------SP---QLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---  264 (499)
Q Consensus       209 G~g---------~~~v~~v~~~~~~~~~~---------d~---~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---  264 (499)
                      |..         ...+..+|...  .++.         |.   +.+++.|+..  .+..+.+|++--.....|.+-|   
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPiqg~gG~~~~~~~  234 (451)
T PRK07678        159 GQAQRKYKYEPLAPGFLHVPPPD--CYRMPGIESEDIYDLECVKEIDRVMTWE--LSETIAAVIMEPIITGGGVLMPPQD  234 (451)
T ss_pred             CCcccccccCCCCCCCEEeCCCc--cccccccCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHH
Confidence            210         11334444321  1121         11   2345555421  1234555665554445677744   


Q ss_pred             -hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCcc
Q 010842          265 -VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPE  342 (499)
Q Consensus       265 -l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~  342 (499)
                       ++++.++|++||+.+++|.++.|+.....-+.....|+ ..|.+++  -|.++.. +..|.++++++-  .+.+.....
T Consensus       235 fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~PDivt~--gK~lggG~~Pi~av~~~~~i--~~~~~~~~~  309 (451)
T PRK07678        235 YMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-KPDIITM--AKGITSAYLPLSATAVKKEI--YEAFKGKGE  309 (451)
T ss_pred             HHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-CCCEEEe--ecccccCCcceeEEEEcHHH--HHHHhccCc
Confidence             89999999999999999999876643221111122455 3898887  5887655 368888887642  233322111


Q ss_pred             CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCC
Q 010842          343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMV---LRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPR  415 (499)
Q Consensus       343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~  415 (499)
                      +-              .+....+-...++.+.++   |..+..+   .+.++..++.++|.+.|++    .|.+.-+ .-
T Consensus       310 ~~--------------~~~h~~T~~gnp~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~~~~~~~~v~~v-rg  371 (451)
T PRK07678        310 YE--------------HFRHVNTFGGNPAACALALKNLEIMENE---NLIERSAQLGELLLEQLKEELGEHPLVGDI-RG  371 (451)
T ss_pred             cc--------------ccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEE-Ee
Confidence            00              000011112233444444   4444333   3556666677777766643    3322111 11


Q ss_pred             CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee--eECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT--IVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       416 ~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ...++.+.+..+.............++...+.++|.++....  ...+...+|++.. ..+|++|||++++++.++.+++
T Consensus       372 ~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Pp-l~it~~eid~~~~~l~~~l~~~  450 (451)
T PRK07678        372 KGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPP-LVISSEEIAFIVGTLKTALERI  450 (451)
T ss_pred             eceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECC-CcCCHHHHHHHHHHHHHHHHhc
Confidence            223334444321100000012345678888999996543211  1123467999884 6789999999999999988765

>PRK13360 omega amino acid--pyruvate transaminase; Provisional

Probab=99.41  E-value=9.5e-10  Score=113.14  Aligned_cols=322  Identities=15%  Similarity=0.158  Sum_probs=173.7

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      ..+.++.+.|++++.-..+       ...|+++||||+-.|+..||...... +. +.+.-+|.....-|-...-+..+.
T Consensus        89 ~~~~~la~~l~~~~p~~~~-------~v~f~~sGseA~e~AlklAr~~~~~~-g~-~~r~~ii~~~~~yHG~t~gals~t  159 (442)
T PRK13360         89 PKAFELANRIAEIAPGGLN-------HVFFTNSGSESVDTALKIALAYHRAR-GE-GSRTRLIGRERGYHGVGFGGISVG  159 (442)
T ss_pred             HHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CC-CCCcEEEEEcCCcCCccHhhhhcc
Confidence            3444566668777631111       24899999999999999999753211 00 001223333444455433333222


Q ss_pred             CC-------C--CCCeEEeeCCCC---CCCcc--------CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----
Q 010842          209 GV-------S--PANIRALPTSVD---ANFSL--------SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----  264 (499)
Q Consensus       209 G~-------g--~~~v~~v~~~~~---~~~~~--------d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----  264 (499)
                      |.       +  ...+..+|...+   ..+..        ..++|++.+...  ....+.+|++--.....|.+-|    
T Consensus       160 g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~f  237 (442)
T PRK13360        160 GIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH--DASTIAAVIVEPVAGSTGVLIPPKGY  237 (442)
T ss_pred             CChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHH
Confidence            21       1  113444554311   00111        245777777532  1234556666666666788888    


Q ss_pred             hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCcc-
Q 010842          265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPE-  342 (499)
Q Consensus       265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~-  342 (499)
                      +++|.++|++||+++++|.++.|+.....-+.....++. .|.+++  -|.++.. +.+|.++.+++  +.+.+...+. 
T Consensus       238 l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~-PDivt~--gK~l~gG~~P~gav~~~~~--i~~~~~~~~~~  312 (442)
T PRK13360        238 LQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGVT-PDLLTC--AKGLTNGAIPMGAVFVSSE--IHDAFMQGPEA  312 (442)
T ss_pred             HHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCC-Cceeee--eeccccCccceEEEEEcHH--HHHHhhcCCcc
Confidence            999999999999999999999655322211111223443 787766  6887543 34667776653  2233322111 


Q ss_pred             ---CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC-c-
Q 010842          343 ---YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH-F-  417 (499)
Q Consensus       343 ---yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-~-  417 (499)
                         ++..             .+.. +.+.......++++.+..+   ...++..++.+++.+.|+++..+..+.+.. . 
T Consensus       313 ~~~~~~~-------------~T~~-g~pl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~G  375 (442)
T PRK13360        313 GIEFFHG-------------YTYS-GHPLACAAALATLDLYERE---GLLTRAARLAPYWEDALHSLRDAPHVIDIRNLG  375 (442)
T ss_pred             ccccccC-------------CCCC-CCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccc
Confidence               1100             1111 2222233334445555333   355677777888888887643222221111 1 


Q ss_pred             eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ....+.+.+... .   ......++..++.++|... ..   .+ ..+|++.. ...|++|||+++++|.++.+++
T Consensus       376 l~~~~~l~~~~~-~---~~~~~~~~~~~l~~~Gvl~-~~---~~-~~lr~~Pp-l~~t~~eid~~~~~l~~~l~~~  441 (442)
T PRK13360        376 LVGAVELAPRDG-K---PGKRAYEVFLKCFEKGLMI-RY---TG-DILALSPP-LIIEEAQIDELFDILAQALKET  441 (442)
T ss_pred             eEEEEEEecCCC-C---cchhHHHHHHHHHHCCcEE-Ee---cC-CEEEEeCC-CccCHHHHHHHHHHHHHHHHHh
Confidence            112233322110 0   0122456777888889543 22   12 46999973 7789999999999999988765

>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.40  E-value=2.1e-10  Score=117.85  Aligned_cols=309  Identities=13%  Similarity=0.064  Sum_probs=167.7

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      ..+.++.+++++++....        ..++++|||+||..|+..++...       | ++.+|.....-|-...-+....
T Consensus        90 ~~~~~la~~L~~~~~~~~--------~v~~~~sGseA~e~Aik~a~~~~-------g-~~~ii~~~~~yHG~t~~~~~~~  153 (426)
T PRK00062         90 ELEVELAELVIELVPSIE--------MVRMVNSGTEATMSAIRLARGYT-------G-RDKIIKFEGCYHGHADSLLVKA  153 (426)
T ss_pred             HHHHHHHHHHHHhCCCCC--------EEEEecCHHHHHHHHHHHHHHHh-------C-CCeEEEEcCccCCchhhhhhcc
Confidence            445566677887763122        24899999999999999998752       1 2223443444455432222222


Q ss_pred             CC-----CCC----CeE-----EeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHH
Q 010842          209 GV-----SPA----NIR-----ALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAE  270 (499)
Q Consensus       209 G~-----g~~----~v~-----~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~  270 (499)
                      |-     +..    ..+     .+.+.     .-|+++|++.+++.   +..+.+|++.......|.+-|    +++|.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~  225 (426)
T PRK00062        154 GSGAATLGLPDSPGVPEDFAKHTLTAP-----YNDLEAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRE  225 (426)
T ss_pred             CccccccCCCCCCCCCcccccceEEcC-----CCCHHHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHH
Confidence            21     100    000     01111     13789999888642   233456666655566898877    999999


Q ss_pred             HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC-ccCCCCCCC
Q 010842          271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD-PEYLKNKPS  349 (499)
Q Consensus       271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~-~~yl~~~~~  349 (499)
                      +|++||+++++|.+|.|+ ...........++ ..|.++  ..|.++..+..|+++.++ + +.+.+... ..+...   
T Consensus       226 l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~-~pDi~~--~gK~l~~G~p~ga~~~~~-~-i~~~~~~~~~~~~~~---  296 (426)
T PRK00062        226 LCDEHGALLIFDEVMTGF-RVALGGAQGYYGV-TPDLTT--LGKIIGGGLPVGAFGGRR-E-IMEQLAPLGPVYQAG---  296 (426)
T ss_pred             HHHHcCCEEEEeechhcc-ccCCccHHHHhCC-CcchHh--hhhHhhCCCcceeeeEHH-H-HHHhhccCCCceecc---
Confidence            999999999999999866 3221111111232 246544  468887655577776654 2 33333211 111111   


Q ss_pred             CCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEec
Q 010842          350 ESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRLN  425 (499)
Q Consensus       350 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~~  425 (499)
                                  ..++.+.......+++..+..+   +..++..++.+++.+.|++    .+ +..-......++.+.+.
T Consensus       297 ------------T~~~~p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~vrg~G~~~~i~l~  360 (426)
T PRK00062        297 ------------TLSGNPLAMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKEAAKKAG-IPLTVNRVGSMFGLFFT  360 (426)
T ss_pred             ------------cCcCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHcC-CceEEEEecceEEEEEe
Confidence                        0112222223334445444322   3556666667777666653    32 32211233344555443


Q ss_pred             CCCCCC----cchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          426 PYPHSG----SADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       426 ~~~~~~----~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +.....    ..........+.+.+.++|.. +.+..   ...++++   ...|++||++++++|.++.+++
T Consensus       361 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~-v~~~~---~~~~~~~---~~~t~~ei~~~~~~l~~~l~~~  425 (426)
T PRK00062        361 DEPVTNYADAKKSDTERFARFFHAMLDEGVY-LAPSQ---FEAGFVS---AAHTDEDIEKTLEAARKAFAAL  425 (426)
T ss_pred             cCCCcchhhhccccHHHHHHHHHHHHHCCeE-eecCC---cCceeee---ccCCHHHHHHHHHHHHHHHHhh
Confidence            221000    000123346788888888854 33322   1235554   4579999999999999988654

>PRK06105 aminotransferase; Provisional

Probab=99.40  E-value=1.1e-09  Score=113.36  Aligned_cols=328  Identities=11%  Similarity=0.054  Sum_probs=178.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      ...+.++.+.|++++..+.+       -.+|+++||+|+-.|+..||...... +..+ ++.+|......|-...-+..+
T Consensus        91 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseAve~AlKlar~~~~~~-g~t~-r~~il~~~~~yHG~t~~a~s~  161 (460)
T PRK06105         91 HGPVIDLAEKLVAMAPVPMS-------KVFFTNSGSEANDTVVKLVWYYNNAL-GRPE-KKKIISRQRGYHGVTIASASL  161 (460)
T ss_pred             CHHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEecCccCCcchhheec
Confidence            44445556668888743222       24889999999999999998542111 0000 223444455556555444333


Q ss_pred             hCC-------C--CCCeEEeeCCCCCCCcc-------------CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC-
Q 010842          208 AGV-------S--PANIRALPTSVDANFSL-------------SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN-  264 (499)
Q Consensus       208 ~G~-------g--~~~v~~v~~~~~~~~~~-------------d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~-  264 (499)
                      .|.       |  ...+..+|...  .++.             ..++|++.+...  ....+.+|++--.....|.+-| 
T Consensus       162 t~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iAavIvEPiqg~gG~~~~~  237 (460)
T PRK06105        162 TGLPNNHRSFDLPLDRILHTGCPH--YYRFGLPGESEEAFATRLANELEALILAE--GPDTIAAFIGEPVMGAGGVIVPP  237 (460)
T ss_pred             cCCcccccccCCCCCCCEEcCCCc--ccccccCCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEccccCCCCCccCC
Confidence            221       1  11233443321  0111             245677766421  1234556666555556677766 


Q ss_pred             ---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCC
Q 010842          265 ---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD  340 (499)
Q Consensus       265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~  340 (499)
                         ++++.++|++||+.+++|.++.|+.....-+.....++. .|.+++  -|.++.. ...|.++.+++  +...+...
T Consensus       238 ~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v~-PDi~~~--gK~lggG~~P~~av~~~~~--i~~~~~~~  312 (460)
T PRK06105        238 KTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGIK-PDILVM--SKQLSSSYQPLSAVLMNEK--VYDPIADE  312 (460)
T ss_pred             HHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCCC-CCeeee--ecccccCcccceEEEEcHH--HHHHHhcc
Confidence               999999999999999999999665433222222223443 787776  4777654 35777777653  22333221


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--C
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--R  415 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~  415 (499)
                      .....             .+....+.....+.+.+   +|..+-.   ++.+++..++.++|.+.|+++....++.+  -
T Consensus       313 ~~~~~-------------~~~h~~T~~gnpl~~aaa~a~L~~i~~---~~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG  376 (460)
T PRK06105        313 SGKIG-------------TFGHGFTASGHPVAAAVALENLAIIEE---RDLVGNAAERGARLQARLRALADHPLVGEVRG  376 (460)
T ss_pred             cccCc-------------ccccCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHhhcCCCeEEEEe
Confidence            10000             00001112223344443   4444432   24667778888888888876533222211  1


Q ss_pred             CceEEEEEecCCCCC-Cc-chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          416 HFALVCFRLNPYPHS-GS-ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       416 ~~~~v~f~~~~~~~~-~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ...+..+.+.+.... .. ........++...+.++|.++ .+.   + ..+|++.. ...|++|||++++.+.++.+++
T Consensus       377 ~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~-~~~---g-~~i~l~Pp-l~it~~eid~~~~~l~~~l~~~  450 (460)
T PRK06105        377 VGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVIS-RAM---G-DTLAFCPP-LIITAAQVDEMVDRFGRALDDV  450 (460)
T ss_pred             cceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEE-Eec---C-CEEEEECC-CccCHHHHHHHHHHHHHHHHHH
Confidence            122334444322100 00 011233467888888889544 321   2 46998874 5579999999999999998876


Q ss_pred             hc
Q 010842          494 FK  495 (499)
Q Consensus       494 ~~  495 (499)
                      .+
T Consensus       451 ~~  452 (460)
T PRK06105        451 AA  452 (460)
T ss_pred             HH
Confidence            54

>PRK06777 4-aminobutyrate aminotransferase; Provisional

Probab=99.40  E-value=2.1e-09  Score=110.20  Aligned_cols=314  Identities=13%  Similarity=0.094  Sum_probs=171.1

Q ss_pred             HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCC
Q 010842          131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGV  210 (499)
Q Consensus       131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~  210 (499)
                      +.++.+.|++++..+..      ...+|+++||+|+..|+..||...       | ++.+|-....-|-...-+..+.|.
T Consensus        85 ~~~la~~l~~~~p~~~~------~~~~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~s~t~~  150 (421)
T PRK06777         85 YVTLAERINALAPIDGP------AKTAFFTTGAEAVENAVKIARAYT-------G-RPGVIAFGGAFHGRTLLTMALTGK  150 (421)
T ss_pred             HHHHHHHHHHhCCCCCC------ceEEEeCCcHHHHHHHHHHHHHhh-------C-CCeEEEEcCCcCCccHHHHhhcCC
Confidence            34445667777643111      124889999999999999998753       1 122333344456554444433331


Q ss_pred             --------C--CCCeEEeeCCCCCC---CccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-CC---hhHHHHHHH
Q 010842          211 --------S--PANIRALPTSVDAN---FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-DN---VEPLAEVAN  273 (499)
Q Consensus       211 --------g--~~~v~~v~~~~~~~---~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d~---l~~I~~ia~  273 (499)
                              +  ...+..+|......   ..-+++.+++.+++.. .+..+.+|++.-.....|.. -|   +++|.++|+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~  229 (421)
T PRK06777        151 VAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADI-APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCD  229 (421)
T ss_pred             CcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHHH
Confidence                    0  11233344321100   0123666777775321 12334455555555555643 33   899999999


Q ss_pred             HhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842          274 EYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS  353 (499)
Q Consensus       274 ~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~  353 (499)
                      +||+++++|.+|.++.....-+.....++ ..|.++  .-|.++..+..|+++.++.  +.+.+....  .         
T Consensus       230 ~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~pDiv~--~sK~l~~G~pigav~~~~~--i~~~~~~~~--~---------  293 (421)
T PRK06777        230 EHGILLIADEVQTGFARTGKLFAMEYYDV-KPDLIT--MAKSLGGGMPISAVVGRAE--VMDAPAPGG--L---------  293 (421)
T ss_pred             HcCCEEEEechhhCCccCCchhhhhhcCC-CCCEEe--eehhhcCCCceEEEEEcHH--HHhccCCCC--C---------
Confidence            99999999999987533221111111232 367665  5788875566888887643  223322110  0         


Q ss_pred             cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEEcCCCceEEEEEecCCCC
Q 010842          354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PRFEIVVPRHFALVCFRLNPYPH  429 (499)
Q Consensus       354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~~~~  429 (499)
                               ..+-....+...+++..+..-.-+++.++..++.+++.+.|+++    |.+.-+ .+...++.+.+.... 
T Consensus       294 ---------~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rg~G~~~~i~~~~~~-  362 (421)
T PRK06777        294 ---------GGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCPAIVDI-RARGSMVAVEFNDPQ-  362 (421)
T ss_pred             ---------CCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-cCceEEEEEEEecCc-
Confidence                     00111133444444443321111456677777788888777653    433322 344344444443211 


Q ss_pred             CCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          430 SGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       430 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                       .......+...+...+.++|.++.....+ + .++|+++. ...|+++|++++++|.++.
T Consensus       363 -~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~-g-~~lr~~pp-l~i~~~~i~~~~~~l~~~l  419 (421)
T PRK06777        363 -TGKPSPEFTRQYQRQALEEGLLLLSCGVH-G-NVIRFLYP-LTIPDAQFSKALNILTRLL  419 (421)
T ss_pred             -cCCccHHHHHHHHHHHHhCCeEEeecCCC-C-CEEEEeCC-CCCCHHHHHHHHHHHHHHH
Confidence             00111345677777788888654332222 2 47999873 5689999999999998875

>PRK07495 4-aminobutyrate aminotransferase; Provisional

Probab=99.40  E-value=6.1e-09  Score=106.72  Aligned_cols=317  Identities=13%  Similarity=0.056  Sum_probs=171.8

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      +.+.++.+.+++++.-+..      ...+|+++||||+..|+..||...       | ++.+|......|-...-+..+.
T Consensus        83 ~~~~~la~~l~~~~p~~~~------~~v~f~~SGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~~~~  148 (425)
T PRK07495         83 ENYVRLAERLNALVPGDFA------KKTIFVTTGAEAVENAVKIARAAT-------G-RSAVIAFGGGFHGRTFMGMSLT  148 (425)
T ss_pred             HHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHhh-------C-CCeEEEECCCcCCccHHHhhhc
Confidence            3444556668887742210      124899999999999999998752       1 1223334444565443333322


Q ss_pred             CC--------C--CCCeEEeeCCCCCCCccC----HHHHHHHHHHHHHcCCccEEEEEecCCCcccccC----ChhHHHH
Q 010842          209 GV--------S--PANIRALPTSVDANFSLS----PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD----NVEPLAE  270 (499)
Q Consensus       209 G~--------g--~~~v~~v~~~~~~~~~~d----~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id----~l~~I~~  270 (499)
                      |.        +  ...+..+|.+.+. ..++    .+++++.++.. ..+..+.+|++.-.....|.+-    -+++|.+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~~~~-~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~  226 (425)
T PRK07495        149 GKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLFKAD-VDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRE  226 (425)
T ss_pred             CCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHHHHhc-cCCCceEEEEECCccCCCCCccCCHHHHHHHHH
Confidence            21        1  1145566654321 1233    33445555321 1123355555554444466442    3899999


Q ss_pred             HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCC
Q 010842          271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSE  350 (499)
Q Consensus       271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~  350 (499)
                      +|++||+++++|.++.|+.....-+.....++ ..|.+++  -|.++..+..|+++.+++  +.+.+..  ...      
T Consensus       227 l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv-~pDi~tl--sK~l~~G~pigav~~~~~--i~~~~~~--~~~------  293 (425)
T PRK07495        227 LCDQHGILLIADEVQTGFARTGKLFAMEHHEV-AADLTTM--AKGLAGGFPLAAVTGRAE--IMDAPGP--GGL------  293 (425)
T ss_pred             HHHHcCCEEEEechhhcCCcCCCceeecccCC-CCCEEee--hhhhcCCccceEEEEcHH--HHhccCC--CCc------
Confidence            99999999999999987532221111111222 2576666  688876667888887653  2222211  000      


Q ss_pred             CCCcccCCCcccCCCCCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEE
Q 010842          351 SNSVVDFKDWQVGTGRRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFR  423 (499)
Q Consensus       351 ~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~  423 (499)
                                  ..+.....+.+.   ++++.+..+   +..++..++.++|.+.|++    .|.+.-+... ...+.+.
T Consensus       294 ------------~~T~~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~-Gl~~~ie  357 (425)
T PRK07495        294 ------------GGTYGGNPLGIAAAHAVLDVIEEE---DLCERANQLGNRLKQRLASLRETVPEIADIRGP-GFMNAVE  357 (425)
T ss_pred             ------------CCCCCCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecC-ceEEEEE
Confidence                        011112234444   445444333   3445555666666666654    3332111112 2334444


Q ss_pred             ecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          424 LNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      +.+...  ..........+.+.+.++|.++. ..... ...+|+... ...|+++||+++++|.++.+++..
T Consensus       358 l~~~~~--~~~~~~~~~~~~~~~~~~Gvl~~-~~g~~-~~~~r~~Pp-l~it~~~id~~~~~l~~~l~~~~~  424 (425)
T PRK07495        358 FNDADS--GLPSAEFANRVRLKALEKGLILL-TCGVH-GNVIRFLAP-ITIQDDVFAEALDILEASILEASA  424 (425)
T ss_pred             EecCCC--CCccHHHHHHHHHHHHHCCeEEe-ecCCC-CCEEEEeCC-CccCHHHHHHHHHHHHHHHHHHhc
Confidence            433210  00112345678888888996542 22111 256999874 778999999999999999887643

>PRK08593 4-aminobutyrate aminotransferase; Provisional

Probab=99.39  E-value=4.4e-09  Score=108.43  Aligned_cols=321  Identities=12%  Similarity=0.038  Sum_probs=172.7

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      +.+.++.+.|++++.-...      ....|+++||+||..|+..||...       | ++.+|......|-...-++.+.
T Consensus        85 ~~~~~lae~L~~~~p~~~~------~~v~f~~SGseA~e~AiklAr~~t-------g-r~~ii~~~~~YHG~t~~als~s  150 (445)
T PRK08593         85 EPLVRLAKKLCELAPGDFE------KRVTFGLSGSDANDGIIKFARAYT-------G-RPYIISFTNAYHGSTYGSLSMS  150 (445)
T ss_pred             HHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHhh-------C-CCeEEEECCCcCCCcHHHHhhc
Confidence            4445555668887742210      024889999999999999998653       1 2233444455576655554443


Q ss_pred             CCC----------CCCeEEeeCCCCCC--C-ccCH-------HHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----
Q 010842          209 GVS----------PANIRALPTSVDAN--F-SLSP-------QLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----  264 (499)
Q Consensus       209 G~g----------~~~v~~v~~~~~~~--~-~~d~-------~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----  264 (499)
                      +..          ...+..+|......  + ..+.       +++++.+.... ....+.+|++--.....|.+-|    
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavI~EPv~g~gG~~~~~~~y  229 (445)
T PRK08593        151 GISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYL-PADEVACIVIETIQGDGGLLEPVPGY  229 (445)
T ss_pred             CCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhc-CCCceEEEEEccccCCCCCcCCCHHH
Confidence            320          11344555432100  0 1122       33333332210 1123556666655566677766    


Q ss_pred             hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCC
Q 010842          265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYL  344 (499)
Q Consensus       265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl  344 (499)
                      +++|.++|++||+++++|+++.|+......+.....++ ..|.+++  -|.++..+..|+++.+++  +.+.+.. ..+.
T Consensus       230 l~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv-~pDi~t~--gK~l~~G~p~gav~~~~~--i~~~~~~-~~~~  303 (445)
T PRK08593        230 FEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNI-TPDLMSF--GKSLAGGMPMSAIVGRKE--IMESLEA-PAHL  303 (445)
T ss_pred             HHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCC-CCCEeee--cccccCCcccEEEEEcHH--HHhhhcc-CCCC
Confidence            99999999999999999999866532211111112244 3687765  577765456788887653  2233321 1111


Q ss_pred             CCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC--CCceEEE
Q 010842          345 KNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP--RHFALVC  421 (499)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~--~~~~~v~  421 (499)
                      .               +. .+.+..+....+++..+-.+   +++++..++.++|.+.|+++. ...++..  -....+.
T Consensus       304 ~---------------T~-~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~g  364 (445)
T PRK08593        304 F---------------TT-GANPVSCAAALATIDMIEDE---SLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIG  364 (445)
T ss_pred             C---------------CC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEE
Confidence            0               10 11121222333444444322   456666777777777776531 1111211  1112223


Q ss_pred             EEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          422 FRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       422 f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      +.+..... ...........+..++.++|..+ .+.   +...+|++.. ...|++||+.+++++.++.+++.+
T Consensus       365 i~l~~~~~-~~~~~~~~~~~~~~~~~~~Gv~~-~~~---~~~~lr~~p~-l~~t~~~id~~~~~l~~~l~~~~~  432 (445)
T PRK08593        365 IDIVSDKK-LKTRDNEAALKICNYCFEHGVVI-IAV---AGNVLRFQPP-LVITYEQLDTALNTIEQAFTALEA  432 (445)
T ss_pred             EEEecCCC-cCCCcHHHHHHHHHHHHHCCeEE-ecc---CCCEEEEECC-CccCHHHHHHHHHHHHHHHHHHhc
Confidence            33322110 00001234567888888999543 221   2256999984 888999999999999999887654

>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.38  E-value=2.3e-09  Score=110.12  Aligned_cols=303  Identities=15%  Similarity=0.078  Sum_probs=170.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      +..+.++.+.|++++....        ...|+++||||+..|+..||...       | ++.+|......|-...-++..
T Consensus        92 ~~~~~~la~~l~~~~p~~~--------~v~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~~~  155 (428)
T PRK12389         92 TELEIEFAKMLKEAIPSLE--------KVRFVNSGTEAVMTTIRVARAYT-------G-RTKIIKFAGCYHGHSDLVLVA  155 (428)
T ss_pred             CHHHHHHHHHHHHhCCCCc--------EEEEeCCHHHHHHHHHHHHHHhh-------C-CCEEEEECCCcCCChHHHHHh
Confidence            3445556666777764211        24899999999999999999763       1 223344455556554444444


Q ss_pred             hCCCC----------------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhH
Q 010842          208 AGVSP----------------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEP  267 (499)
Q Consensus       208 ~G~g~----------------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~  267 (499)
                      .|-+.                .++..+|.       -|++.|++.+++.   +..+.+|++.-.....|.+.|    +++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~---~~~vaavi~EPv~g~~G~~~p~~~yl~~  225 (428)
T PRK12389        156 AGSGPSTLGTPDSAGVPKSIAQEVITVPF-------NDIEALKEALDKW---GDEVAAVLVEPIVGNFGIVEPKPGFLEA  225 (428)
T ss_pred             cCCcccccCCCCCCCCCCcccCceEEcCC-------CCHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHH
Confidence            33210                01122221       1789999888642   234556666655666788888    999


Q ss_pred             HHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC-ccCCCC
Q 010842          268 LAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD-PEYLKN  346 (499)
Q Consensus       268 I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~-~~yl~~  346 (499)
                      |.++|++||+.+++|.++.|+ ...........|+ ..|.+++  -|.++..+..|.++.+++  +.+.+... +.+.. 
T Consensus       226 l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv-~PDivt~--gK~lggG~Pi~av~~~~~--i~~~~~~~~~~~~~-  298 (428)
T PRK12389        226 VNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGV-EPDLTAL--GKIIGGGLPIGAYGGRKD--IMEQVAPLGPAYQA-  298 (428)
T ss_pred             HHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCC-CCCeeee--chhhcCCCceeEEeEHHH--HHhhhccCCCcccc-
Confidence            999999999999999999876 3221111122344 3787766  688866566888876543  22333211 11110 


Q ss_pred             CCCCCCCcccCCCcccCCCCCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEEcCCCce
Q 010842          347 KPSESNSVVDFKDWQVGTGRRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPR-FEIVVPRHFA  418 (499)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~-~~~~~~~~~~  418 (499)
                                       .+-....+.+.   ++|..+..+   +..++..++.++|.+.|++    .|- .++.....  
T Consensus       299 -----------------~T~~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~g--  356 (428)
T PRK12389        299 -----------------GTMAGNPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAEKHGITITINRLKG--  356 (428)
T ss_pred             -----------------cCCccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCc--
Confidence                             11122334433   444444333   3566777778888777765    332 12222111  


Q ss_pred             EEEEEecCCCCCC--c--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          419 LVCFRLNPYPHSG--S--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       419 ~v~f~~~~~~~~~--~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      ++.+.+.......  .  ..-......+.+.+.++|..+ .+.   +...+.++   ...|++||+++++++.++.++
T Consensus       357 ~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~-~~~---~~~~~~~~---l~~t~e~id~~~~~l~~~l~~  427 (428)
T PRK12389        357 ALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINL-APS---KYEAWFLT---TAHTEEDIEETLEAVDRAFAQ  427 (428)
T ss_pred             EEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEe-ecC---CCCCeeec---CCCCHHHHHHHHHHHHHHHHh
Confidence            3333332111000  0  001234567888888889543 332   11123332   457999999999999988764

>PRK09221 beta alanine--pyruvate transaminase; Provisional

Probab=99.38  E-value=1.8e-09  Score=111.11  Aligned_cols=326  Identities=15%  Similarity=0.138  Sum_probs=172.4

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      ..+.++.+.|++++.-+.+       ...|+++||+|+..|+..||...... +. +.+..+|......|-...-+....
T Consensus        92 ~~~~~la~~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~~~~~-g~-~~r~~ii~~~~~yHG~t~gals~~  162 (445)
T PRK09221         92 PLAFELAERLAELAPGGLD-------HVFFTNSGSESVDTALKIALAYHRAR-GQ-GTRTRLIGRERGYHGVGFGGISVG  162 (445)
T ss_pred             HHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CC-CCCcEEEEECCCcCccchhhhccC
Confidence            3444455667777642211       24899999999999999998753211 00 011223444444564433333222


Q ss_pred             CC-------C--CCCeEEeeCCC---CCCCcc--------CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----
Q 010842          209 GV-------S--PANIRALPTSV---DANFSL--------SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----  264 (499)
Q Consensus       209 G~-------g--~~~v~~v~~~~---~~~~~~--------d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----  264 (499)
                      |.       +  ...+..+|...   ...+..        ..++|++.++..  ....+.+|++--.....|.+-|    
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAavi~Epv~g~~G~~~~~~~y  240 (445)
T PRK09221        163 GIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALH--DASTIAAVIVEPMAGSAGVLVPPKGY  240 (445)
T ss_pred             CChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCCCcccCCHHH
Confidence            21       1  01234444321   000110        135666666431  1134556666666677888888    


Q ss_pred             hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccC
Q 010842          265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEY  343 (499)
Q Consensus       265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~y  343 (499)
                      +++|.++|++||+++++|+++.|+.....-+.....++. .|.++++  |.++.. +..|.++.+++  +.+.+...+.+
T Consensus       241 l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv~-PDi~~~g--K~l~gG~~Pi~av~~~~~--i~~~~~~~~~~  315 (445)
T PRK09221        241 LQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGVT-PDIITFA--KGLTNGAIPMGAVIASDE--IYDAFMQGPEY  315 (445)
T ss_pred             HHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCCC-CCEEEec--cccccCcccceeeEEcHH--HHHhhccCccc
Confidence            999999999999999999998765322111111123442 6877664  666432 23566666643  22333221111


Q ss_pred             CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC--CceEEE
Q 010842          344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR--HFALVC  421 (499)
Q Consensus       344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~~~~v~  421 (499)
                      ....         ....+.. +.+.......++|+.+..+   ..+++..++.++|++.|+++.++..+.+.  ...+..
T Consensus       316 ~~~~---------~~~~T~~-~~pl~~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~  382 (445)
T PRK09221        316 AIEF---------FHGYTYS-AHPVACAAGLATLDIYREE---DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAG  382 (445)
T ss_pred             cccc---------ccccCCC-cCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEE
Confidence            0000         0000111 2121222223444444333   45678888889999888776332222111  111223


Q ss_pred             EEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          422 FRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       422 f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +.+.+.. ...   .....++.+++.++|..+ ..   .+ ..+|++.. ...|++||++++++|.++..++
T Consensus       383 v~~~~~~-~~~---~~~~~~~~~~~~~~Gv~~-~~---~~-~~lr~~Pp-l~~t~~eid~~~~~l~~~l~~~  444 (445)
T PRK09221        383 IELAPRP-GAP---GARGYEAFMKCFEKGLLV-RY---TG-DTIALSPP-LIIEKAQIDELVDALGDALRAV  444 (445)
T ss_pred             EEEeccc-ccc---cchHHHHHHHHHHCCeEE-ee---cC-CEEEEECC-ccCCHHHHHHHHHHHHHHHHhh
Confidence            3333211 000   112356778888889543 22   12 46999973 7789999999999999988764

>PRK05639 4-aminobutyrate aminotransferase; Provisional

Probab=99.38  E-value=2.7e-09  Score=110.11  Aligned_cols=318  Identities=13%  Similarity=0.041  Sum_probs=174.3

Q ss_pred             HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC
Q 010842          130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG  209 (499)
Q Consensus       130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G  209 (499)
                      .+.++.+.|+++++....       ...|+++|||||..|+..||...       | ++.+|-....-|-...-+..+.|
T Consensus        97 ~~~~lae~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~a~s~~~  161 (457)
T PRK05639         97 RAIRVAEKLAEISPIENP-------KVLFGLSGSDAVDMAIKVSKFST-------R-RPWILAFIGAYHGQTLGATSVAA  161 (457)
T ss_pred             HHHHHHHHHHhhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCCccHHHHHHcC
Confidence            344455667787653322       24899999999999999998652       1 22233334445655544444433


Q ss_pred             C--------C--CCCeEEeeCCCCCC--Cc----cCHHH--------HHHHHHHHHHcCCccEEEEEecCCCcccccCC-
Q 010842          210 V--------S--PANIRALPTSVDAN--FS----LSPQL--------LRRAVEADVEAGLVPLFLCATVGTTSTTAVDN-  264 (499)
Q Consensus       210 ~--------g--~~~v~~v~~~~~~~--~~----~d~~~--------L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~-  264 (499)
                      .        +  ..++..+|......  +.    -|.++        |++.+......+..+.+|++--.....|.+-| 
T Consensus       162 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~  241 (457)
T PRK05639        162 FQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPP  241 (457)
T ss_pred             CCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCC
Confidence            2        1  12355666542100  00    12333        33333221111234555655554445566533 


Q ss_pred             ---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCc
Q 010842          265 ---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDP  341 (499)
Q Consensus       265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~  341 (499)
                         +++|.++|++||+.+++|.++.|+.....-+.....++ ..|.+++  -|.++..++.|.++.+++- . +.+.  .
T Consensus       242 ~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~~--gK~l~gG~pi~av~~~~~i-~-~~~~--~  314 (457)
T PRK05639        242 ENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEV-KPDLIIF--GKGVASGMGLSGVIGRKEL-M-DLTS--G  314 (457)
T ss_pred             HHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCC-CCCEEEe--chhhcCCCcceeEEehHHH-H-hhcC--C
Confidence               79999999999999999999987532221112222355 3898885  7888766777888876542 1 2111  0


Q ss_pred             cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEcC--CCce
Q 010842          342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD-PRFEIVVP--RHFA  418 (499)
Q Consensus       342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~~~~~--~~~~  418 (499)
                      .++.               +. .+.+..+....+++..+..+   +.+++..++.++|.+.|+++ .++.++.+  -...
T Consensus       315 ~~~~---------------T~-~g~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl  375 (457)
T PRK05639        315 SALL---------------TP-AANPVISAAAEATLEIIEEE---NLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGL  375 (457)
T ss_pred             Cccc---------------CC-CcCHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHHhCCCEEeecccee
Confidence            1110               10 11111222333344444333   45566667777887777663 12222222  1222


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      ++.+.+..+..   .........+.+.+.++|.++ .+.. .+...+|+... ...|++|||+++++|.++.+++.
T Consensus       376 ~~gve~~~~~~---~~~~~~~~~~~~~~~~~Gv~~-~~~g-~~~~~lr~~Pp-l~it~~~id~~~~~l~~~l~~~~  445 (457)
T PRK05639        376 MIGVEIVKENG---KPDPELTGKICWRAFELGLIL-PSYG-MFGNVIRITPP-LVITKEIAEKGLEIMERAIKDAL  445 (457)
T ss_pred             EEEEEEecCCC---CCCHHHHHHHHHHHHhCCeEE-eecC-CCCCEEEEeCC-CccCHHHHHHHHHHHHHHHHHHH
Confidence            33444432110   001234567888888899543 3321 12357999984 78899999999999999987764

>PRK05965 hypothetical protein; Provisional

Probab=99.38  E-value=3.8e-09  Score=109.22  Aligned_cols=334  Identities=13%  Similarity=0.026  Sum_probs=181.3

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCe-EEEcCCCCchhHHHHHH
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKL-VVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~-~i~~s~~~H~s~~ka~~  206 (499)
                      ..+.++.+.|++++.-+.+       ..+|+++||||+-.|+..||......    |. .+. +|......|-...-+..
T Consensus        90 ~~~~~lae~L~~~~p~~~~-------~v~f~~sGSEAve~AlKlAr~~~~~~----g~~~r~kii~~~~~YHG~t~~a~s  158 (459)
T PRK05965         90 EPAIRLAAKLAERAPGSLN-------HVYFTLGGSDAVDSAVRFIRHYWNAT----GRPSKKQFISLERGYHGSSSVGAG  158 (459)
T ss_pred             HHHHHHHHHHHhhCCCCcC-------EEEEeCChhHHHHHHHHHHHHHHHhc----CCCCccEEEEecCCcCcccHHHHH
Confidence            3444555667777632211       34889999999999999999753211    21 122 34444445655433333


Q ss_pred             HhCC-------C--CCCeEEeeCCCC--CCCccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccC----
Q 010842          207 LAGV-------S--PANIRALPTSVD--ANFSLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD----  263 (499)
Q Consensus       207 ~~G~-------g--~~~v~~v~~~~~--~~~~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id----  263 (499)
                      ..|.       |  ...+..+|....  ..+.-|        +++|++.++..  ....+.+|++.-.....|.+-    
T Consensus       159 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAAvIvEPiqg~gG~~~p~~~  236 (459)
T PRK05965        159 LTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL--GADNVAAFFCEPIQGSGGVIVPPKG  236 (459)
T ss_pred             hcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCCCCccCCHH
Confidence            3221       1  123344543210  001123        25666666531  113455555554444456552    


Q ss_pred             ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCcc
Q 010842          264 NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDPE  342 (499)
Q Consensus       264 ~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~~  342 (499)
                      =+++|.++|++||+.+++|.++.|+.....-+.....|+. .|.+++  -|.++..+ ..|.++++++-  .+.+.....
T Consensus       237 yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~-PDiv~~--gKgl~gG~~Pi~av~~~~~i--~~~~~~~~~  311 (459)
T PRK05965        237 WLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVV-PDLMTV--AKGLTSGYVPMGAVLMSDHV--YQGIADGAG  311 (459)
T ss_pred             HHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCC-CCeEEe--chhhccCCcceeEEEEcHHH--HHHHhcccc
Confidence            2799999999999999999998876433322222233553 899988  58876664 68888887642  233321110


Q ss_pred             CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCceEE
Q 010842          343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFALV  420 (499)
Q Consensus       343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v  420 (499)
                      ...             .+....+.....+...+++..+..-.-++.+++..++.++|.+.|+++....++.+  -...++
T Consensus       312 ~~~-------------~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~  378 (459)
T PRK05965        312 AAA-------------PVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLG  378 (459)
T ss_pred             ccc-------------cccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEE
Confidence            000             00001111223444444444432111124566777888888888876432222211  112233


Q ss_pred             EEEecCCC-CCCc-chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhccCC
Q 010842          421 CFRLNPYP-HSGS-ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGSA  498 (499)
Q Consensus       421 ~f~~~~~~-~~~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~~~  498 (499)
                      .+.+.... ..+. ........++...+.++|.++ .+   .+..++|++.. ...|++||++++++|.++.+++.++++
T Consensus       379 gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~-~~---~g~~~i~~~Pp-L~it~~ei~~~~~~l~~~l~~~~~~~~  453 (459)
T PRK05965        379 ALELVADKATKTPFDAALDPADRIFDRAYANGLVF-RA---FGDGVLGFAPA-LCCTEGEFDLIFERTRKTLDDVLADPD  453 (459)
T ss_pred             EEEEeccccccCCCCchhHHHHHHHHHHHhCCeEE-Ee---cCCcEEEEECC-CcCCHHHHHHHHHHHHHHHHHHhcCcc
Confidence            44443211 0000 001234567888888999654 22   24466999874 678999999999999999998877664

>PRK06062 hypothetical protein; Provisional

Probab=99.38  E-value=3.8e-09  Score=108.99  Aligned_cols=319  Identities=11%  Similarity=0.033  Sum_probs=174.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      .+.+.++.+.|++++.-+.+       ...|+++||+|+..|+..||...       | ++.+|.....-|-...-+...
T Consensus        94 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGsEAve~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~als~  158 (451)
T PRK06062         94 NDARSEAARLIAERAPGDLS-------KVFFTNGGADANEHAVRMARLHT-------G-RPKVLSAYRSYHGGTGSAINL  158 (451)
T ss_pred             CHHHHHHHHHHHHhCCCCCC-------EEEEcCChHHHHHHHHHHHHHhh-------C-CceEEEEeCCCCCCCHHHHhh
Confidence            34445556667777642211       34899999999999999998753       1 222333444456554444444


Q ss_pred             hCCC--------CCCeEEeeCCCCCCCc------cC-------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC--
Q 010842          208 AGVS--------PANIRALPTSVDANFS------LS-------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN--  264 (499)
Q Consensus       208 ~G~g--------~~~v~~v~~~~~~~~~------~d-------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~--  264 (499)
                      .|..        ...+..++...  .++      -|       +++|++.++..  ....+.+|++--....-|.+-|  
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~  234 (451)
T PRK06062        159 TGDPRRWPNDTGRAGVVHFFGPF--LYRSEFHATTEEEECERALAHLERVIELE--GPSTIAAILLESVPGTAGILVPPP  234 (451)
T ss_pred             cCCcccccCCCCCCCCEEeCCCC--ccccccCCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCH
Confidence            3320        01223333221  111      12       56777777431  1234556666555566788888  


Q ss_pred             --hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCc
Q 010842          265 --VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDP  341 (499)
Q Consensus       265 --l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~  341 (499)
                        +++|.++|++||+.+++|.++.|+.....-+.....|+ ..|.+++  -|.++..+ ..|.++.+++  +.+.+... 
T Consensus       235 ~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv-~PDi~t~--gK~lggG~~Pigav~~~~~--i~~~~~~~-  308 (451)
T PRK06062        235 GYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGV-VPDLITF--AKGVNSGYVPLGGVAISEA--IAATFADR-  308 (451)
T ss_pred             HHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCC-CCCeeee--chhhhcCCcCcEEEEEcHH--HHHHhccC-
Confidence              99999999999999999999987533222112222355 3788876  68887654 5778887763  33344211 


Q ss_pred             cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHH-HHHHHHHhc----CCCeEEEcCCC
Q 010842          342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLA-KMFEGFVKS----DPRFEIVVPRH  416 (499)
Q Consensus       342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a-~~l~~~L~~----~~~~~~~~~~~  416 (499)
                      .+....             + -.+.+..+....++|..+..+.   .+++..++. +++.+.|++    .|.+.-+. -.
T Consensus       309 ~~~~~~-------------T-~~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vr-G~  370 (451)
T PRK06062        309 PYPGGL-------------T-YSGHPLACAAAVATINAMEEEG---IVENAARIGAEVLGPGLRELAERHPSVGEVR-GL  370 (451)
T ss_pred             CCCCCC-------------C-CCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhcCCcEEeEe-cc
Confidence            111100             0 1111222223334444443333   445555554 355555544    33221111 11


Q ss_pred             ceEEEEEecCCCC----CCcch-hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          417 FALVCFRLNPYPH----SGSAD-TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       417 ~~~v~f~~~~~~~----~~~~~-~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      ..++.+.+..+..    ..... .......+.+.+.++|.+. .+  . + ..+|++.. ..+|++|||++++++.++.+
T Consensus       371 Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~-~~--~-~-~~lrl~pp-l~~t~~eid~~~~~l~~~l~  444 (451)
T PRK06062        371 GVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLP-FV--N-G-NRIHVVPP-CTVTEDEVREGLAILDAALA  444 (451)
T ss_pred             ccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEE-ee--c-C-CEEEEECC-ccCCHHHHHHHHHHHHHHHH
Confidence            2233444322110    00000 0224567888899999653 22  1 2 36898873 67899999999999999987


Q ss_pred             HHhc
Q 010842          492 RLFK  495 (499)
Q Consensus       492 ~l~~  495 (499)
                      ++..
T Consensus       445 ~~~~  448 (451)
T PRK06062        445 VADA  448 (451)
T ss_pred             Hhhh
Confidence            7643

>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase

Probab=99.37  E-value=2.2e-09  Score=110.80  Aligned_cols=309  Identities=12%  Similarity=0.028  Sum_probs=168.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      +..+.++.+.+++.+..-+        ...|+++||||+..|+..||...       | ++.+|-.....|-........
T Consensus       138 ~~~~~~lAe~l~~~~p~~~--------~v~f~~SGsEA~e~AlklAR~~t-------g-r~~Ii~~~g~YHG~~~~~~~~  201 (474)
T PLN02482        138 CLLENVLAEMVIDAVPSVE--------MVRFVNSGTEACMGVLRLARAYT-------G-REKIIKFEGCYHGHADSFLVK  201 (474)
T ss_pred             CHHHHHHHHHHHHhCCCCC--------EEEEeCChHHHHHHHHHHHHHhc-------C-CCEEEEECCccCCCcchhhhh
Confidence            4566677788888874212        24899999999999999998753       1 122233333345432211111


Q ss_pred             h--CC---------CC-----CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhH
Q 010842          208 A--GV---------SP-----ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEP  267 (499)
Q Consensus       208 ~--G~---------g~-----~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~  267 (499)
                      .  |.         |.     ..+..+|.       -|+++|++.+++   .+..+.+|++.-.....|.+.|    +++
T Consensus       202 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------nd~~~l~~~l~~---~~~~iAavI~Epv~g~~G~i~p~~~fl~~  271 (474)
T PLN02482        202 AGSGVATLGLPDSPGVPKAATSATLTAPY-------NDLEAVKKLFEA---NKGEIAAVILEPVVGNSGFIVPKKEFLEG  271 (474)
T ss_pred             cCCCccccCCCCCCCCCCCCCCCeEEecC-------CChHHHHHHHHh---CCCceEEEEECCCCCCCCCcCCCHHHHHH
Confidence            1  11         00     01112221       178999998864   2234556666665566787766    568


Q ss_pred             HHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCC
Q 010842          268 LAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNK  347 (499)
Q Consensus       268 I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~  347 (499)
                      |.++|++||+.+++|.++.|+ ...........|+ ..|.+++  -|.++..+.+|.+..+++  +.+.+.....+....
T Consensus       272 lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv-~PDi~t~--gK~lggG~Pigav~g~~e--i~~~~~~~~~~~~~~  345 (474)
T PLN02482        272 LREITKENGALLVFDEVMTGF-RIAYGGAQEYFGI-TPDLTTL--GKVIGGGLPVGAYGGRRE--IMEMVAPAGPMYQAG  345 (474)
T ss_pred             HHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCC-CCCEEEe--cchhhCCCceEEEEEcHH--HHHhhccCCCccccc
Confidence            999999999999999998765 3322222222344 3788776  688876677888876643  223332111111100


Q ss_pred             CCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEE-cCCCceEEEEE
Q 010842          348 PSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP---RFEIV-VPRHFALVCFR  423 (499)
Q Consensus       348 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~-~~~~~~~v~f~  423 (499)
                                   |. .+.+.......++|..+..   ++..++..++.++|.+.|+++-   ++.++ .... .++.+.
T Consensus       346 -------------T~-~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~-g~~gi~  407 (474)
T PLN02482        346 -------------TL-SGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEAGKKAGHEMCGGYIS-GMFGFF  407 (474)
T ss_pred             -------------Cc-chhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccc-eEEEEE
Confidence                         00 0111122233344444432   2456677777778777776531   12222 2222 233333


Q ss_pred             ecCCCCCC--c--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          424 LNPYPHSG--S--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       424 ~~~~~~~~--~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +.......  +  ..-.....++...+.++|.. +.+.....    + .+ +...|++|||++++++.++.+++
T Consensus       408 f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~-~~~~~~~~----~-~p-sl~ht~~dId~~l~al~~~l~~~  474 (474)
T PLN02482        408 FTEGPVYNFADAKKSDTAKFARFHRGMLEEGVY-LAPSQFEA----G-FT-SLAHTEEDIDFTIAAAERVLARI  474 (474)
T ss_pred             EecCCccChhhhccCCHHHHHHHHHHHHHCCeE-EeccCCCC----C-cC-CCCCCHHHHHHHHHHHHHHHHhC
Confidence            32210000  0  00123345678888888854 33321111    1 12 46679999999999999987653

>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases

Probab=99.35  E-value=2.6e-09  Score=110.09  Aligned_cols=325  Identities=12%  Similarity=0.037  Sum_probs=174.5

Q ss_pred             HHHHHHHHHHHHHHcCCCC-ccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPK-TFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~-~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~  206 (499)
                      ++.+.++.+.|++++.... ..     .-.+++++||||+..|+..||...       | ++.+|......|-...-+..
T Consensus        81 ~~~~~~lae~L~~~~p~~~~~~-----~~~f~~~sGsEA~e~AlklAr~~t-------g-r~~Ii~~~~~yHG~t~~~~s  147 (442)
T TIGR00709        81 TPLKDAFIEALLNIIPKRKMDY-----KLQFPGPSGADAVEAAIKLAKTYT-------G-RTNVISFSGGFHGMTIGALA  147 (442)
T ss_pred             cHHHHHHHHHHHHhCCCcCCCc-----cEEEeCCCHHHHHHHHHHHHHHhc-------C-CCeEEEEcCCcCCchHHHHh
Confidence            3455555666888874321 00     012446899999999999999762       1 22344445556666555554


Q ss_pred             HhCC---------CCCCeEEeeCCCCCCCcc--------CHHHHHHHHHHHHH----cCCccEEEEEecCCCccccc---
Q 010842          207 LAGV---------SPANIRALPTSVDANFSL--------SPQLLRRAVEADVE----AGLVPLFLCATVGTTSTTAV---  262 (499)
Q Consensus       207 ~~G~---------g~~~v~~v~~~~~~~~~~--------d~~~L~~~i~~~~~----~g~~p~~vv~t~gtt~~G~i---  262 (499)
                      ..|.         ....+..+|...  .++.        +.+.+.+.+++...    ....+.+|++.-...+.|.+   
T Consensus       148 ~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~  225 (442)
T TIGR00709       148 VTGNLFAKNAVGMLMPGVQFMPYPH--EYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAP  225 (442)
T ss_pred             hcCChhhhccCCCCCCCcEEeCCCc--cccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCC
Confidence            4431         011344454431  1222        22333332322221    11234455555444455655   


Q ss_pred             -CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCc
Q 010842          263 -DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDP  341 (499)
Q Consensus       263 -d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~  341 (499)
                       +=+++|.++|++||+++++|.++.|+.....-+.....++. .|.+++  -|.++..+..|.++.+++  + ..+.  .
T Consensus       226 ~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~-PDiv~~--gK~l~~G~Pigav~~~~~--~-~~~~--~  297 (442)
T TIGR00709       226 SEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIE-PDFVVM--SKAVGGGLPLAVLLIAPE--F-DAWQ--P  297 (442)
T ss_pred             HHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCC-CcEEEE--cccccCCcccEEEEEchH--H-hccC--C
Confidence             23899999999999999999999876443222221223443 788885  688876677888888764  2 2221  1


Q ss_pred             cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC--CCce
Q 010842          342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP--RHFA  418 (499)
Q Consensus       342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~--~~~~  418 (499)
                      ....               +...+.+.......++|+.+..+   +..++..++.++|.+.|+++. ...++.+  -...
T Consensus       298 ~~~~---------------~T~~gnpla~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl  359 (442)
T TIGR00709       298 AGHT---------------GTFRGNQLAMVTGTEALNYWKDD---NLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGL  359 (442)
T ss_pred             CcCC---------------CCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccce
Confidence            0000               00112222222333344443333   345566677777777776531 1222222  1223


Q ss_pred             EEEEEecCCC-CCC---cch-hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          419 LVCFRLNPYP-HSG---SAD-TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       419 ~v~f~~~~~~-~~~---~~~-~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ++.+.+.... ..+   ... .......+...+.++|.++ .+.... ..++|+... ...|++||+++++++.++..++
T Consensus       360 ~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~-~~~~~~-~~~l~~~Pp-l~it~~ei~~~~~~l~~~l~~~  436 (442)
T TIGR00709       360 MQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLL-ETGGRE-GEVFRLLCP-ITIDQEECEEGISRFKQAVEEA  436 (442)
T ss_pred             EEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEE-eecCCC-CCEEEEECC-CCCCHHHHHHHHHHHHHHHHHH
Confidence            3444443211 000   000 1134567788888889543 332222 356899884 7789999999999999998887


Q ss_pred             hcc
Q 010842          494 FKG  496 (499)
Q Consensus       494 ~~~  496 (499)
                      .++
T Consensus       437 ~~~  439 (442)
T TIGR00709       437 LAE  439 (442)
T ss_pred             HHH
Confidence            654

This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.

>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional

Probab=99.35  E-value=8.4e-10  Score=110.34  Aligned_cols=280  Identities=12%  Similarity=0.079  Sum_probs=156.8

Q ss_pred             HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC----
Q 010842          134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG----  209 (499)
Q Consensus       134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G----  209 (499)
                      +.+.+++++|.+.         .+++++||+|+..|+..||...       | ++.+|..+...|-...-+....|    
T Consensus        71 la~~l~~~~~~~~---------v~~~~SGseA~e~Alklar~~~-------g-r~~Ii~~~~syHG~t~~~ls~~~~~~~  133 (364)
T PRK04013         71 MLEELSKWVNYEY---------VYMGNSGTEAVEAALKFARLYT-------G-RKEIIAMTNAFHGRTMGALSATWKPKY  133 (364)
T ss_pred             HHHHHHhhcCCCE---------EEEeCchHHHHHHHHHHHHHHh-------C-CCEEEEECCccccCchhhccCCCCccc
Confidence            3344677776643         3899999999999999998752       1 12234444444654433333222    


Q ss_pred             ---CCC--CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-CC---hhHHHHHHHHhCCEEE
Q 010842          210 ---VSP--ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-DN---VEPLAEVANEYGIWVH  280 (499)
Q Consensus       210 ---~g~--~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d~---l~~I~~ia~~~~~~lh  280 (499)
                         .+.  ..+..+|.       -|++++++.+.++      +.+|++.......|.+ -|   +++|.++|++||+.++
T Consensus       134 ~~~~~p~~~~~~~~~~-------~d~~~l~~~i~~~------~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI  200 (364)
T PRK04013        134 REDFEPLVPGFKHIPF-------NDVEAAKEAITKE------TAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLI  200 (364)
T ss_pred             ccCCCCCCCCcEEecC-------CCHHHHHHHhcCC------cEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence               110  12222322       2678888887532      3355555544444554 34   9999999999999999


Q ss_pred             eeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCc
Q 010842          281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDW  360 (499)
Q Consensus       281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~  360 (499)
                      +|+++.|+ ....-+.....++. .|.+++  -|.++..+..|.++.++.-        .+..  ..             
T Consensus       201 ~DEv~tG~-RtG~~~a~~~~gv~-PDiv~~--gK~lggG~P~~a~~~~~~~--------~~~~--~~-------------  253 (364)
T PRK04013        201 ADEVQSGL-RTGKFLAIEHYKVE-PDIVTM--GKGIGNGVPVSLTLTNFDV--------ERGK--HG-------------  253 (364)
T ss_pred             EechhhcC-CCCchhHHHhcCCC-CCEEEe--cccccCCceeEEEEecccc--------cCCC--cC-------------
Confidence            99998875 33222222223443 788887  5877655667777766431        0000  00             


Q ss_pred             ccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHH
Q 010842          361 QVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNR  440 (499)
Q Consensus       361 ~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~  440 (499)
                      +.-.+.+..+....+++..+-.+++.+.+++.      +. .+.. |.+.-+ .-..-++.+.+..+           ..
T Consensus       254 ~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~------l~-~l~~-~~v~~v-RG~Gl~~gve~~~~-----------~~  313 (364)
T PRK04013        254 STFGGNPLACKAVAVTLRILRRERLVEKAGEK------FI-EIKG-ERVVTT-RGRGLMIGIVLKKP-----------VG  313 (364)
T ss_pred             CCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH------HH-Hhcc-Ccceee-eeCcEEEEEEeCCc-----------HH
Confidence            00112222233344445555444444333321      22 2222 221111 11122334444321           24


Q ss_pred             HHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          441 KLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       441 ~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      .+.+.+.++|.+. .+   .+..++|+... ...|++|+++++++|.++.++++.
T Consensus       314 ~i~~~~~~~Gll~-~~---~g~~vlr~~Pp-l~it~~~i~~~~~~l~~~l~~~~~  363 (364)
T PRK04013        314 KYVEELQNRGYLV-HT---AGQRVIRLLPP-LIISKDTMEEAKSAIEGVINDILG  363 (364)
T ss_pred             HHHHHHHhCCcEE-ee---CCCCEEEEeCC-cccCHHHHHHHHHHHHHHHHHHhc
Confidence            5777888889544 22   23467999884 678999999999999999887653

>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]

Probab=99.35  E-value=2.4e-09  Score=102.29  Aligned_cols=340  Identities=17%  Similarity=0.125  Sum_probs=197.8

Q ss_pred             CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC
Q 010842          117 VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ  196 (499)
Q Consensus       117 ~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~  196 (499)
                      ..+.|+.|.+..-+.+.+.+.+.+.=|.|.+.     .+.++|+|+|.|+.+-|......          ++.-|+++-+
T Consensus       105 s~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p-----~dI~LT~GAS~ai~~il~l~~~~----------~~~GvliPiP  169 (475)
T KOG0258|consen  105 SLGAYSDSQGVPGVRKHVAEFIERRDGIPADP-----EDIFLTTGASPAIRSILSLLIAG----------KKTGVLIPIP  169 (475)
T ss_pred             cccccccccCChhHHHHHHHHHHhccCCCCCH-----HHeeecCCCcHHHHHHHHHHhcC----------CCCceEeecC
Confidence            55789999999999999999999998875442     36799999998877666554432          2333555655


Q ss_pred             CchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHH
Q 010842          197 THSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVAN  273 (499)
Q Consensus       197 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~  273 (499)
                      -++-+...+..+|.   ..+..-.|++.+|.+|.++|++.+++.. ++..|.++|+..+-|+||.+   +.+++|..+|+
T Consensus       170 QYPLYsAti~l~~~---~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~  245 (475)
T KOG0258|consen  170 QYPLYSATISLLGG---TQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEENIEGIICFAA  245 (475)
T ss_pred             CCchhHHHHHHhCC---cccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHHHHHHHHHHH
Confidence            66666666778888   6776667887889999999999999987 78999999999999999999   77999999999


Q ss_pred             HhCCEEEeeccccchhccCc-c---chhhhc--C--CC-CCceeEec-ccccccC--CCcceEEEE--eCchhHHHhhcC
Q 010842          274 EYGIWVHVDAAYAGSACICP-E---FRHYLN--G--IE-RVDSFSFS-PHKWLLS--YLDCCCLWV--KQPGLLVKALST  339 (499)
Q Consensus       274 ~~~~~lhvD~A~g~~~~~~~-~---~~~~~~--g--~~-~aDsi~~~-~hK~l~~--p~~~g~l~~--r~~~~l~~~~~~  339 (499)
                      ++++.+..|.+|--..+.-. +   ++..+.  |  .. .+..+++. .||...+  ....|.+=+  ++++.....+..
T Consensus       246 ~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl  325 (475)
T KOG0258|consen  246 EEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKL  325 (475)
T ss_pred             HcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHH
Confidence            99999999998754433211 1   111110  1  11 23333332 3444322  222333222  222211111111


Q ss_pred             CccCCCCCCCCCCCcccCCCcccCCCCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce
Q 010842          340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA  418 (499)
Q Consensus       340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~  418 (499)
                      ...-+...-..    ....+....--.+.. ...+|.       ..-..+++.....|+.+.+.+++.+|++.. +++..
T Consensus       326 ~si~lc~~V~G----Q~~vdl~VnPP~Pgd~Sy~~~~-------~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn-~~qGA  393 (475)
T KOG0258|consen  326 ASIKLCPQVSG----QKLVDLVVNPPKPGDPSYDLFS-------SEKDGILSSLRSRAKLTEDAFNSLEGISCN-PVQGA  393 (475)
T ss_pred             HhhhhcCCccc----hhhhceecCCCCCCCcchhhhh-------hhhHhHHHHHHHHhHHHHHHHhhcCceeec-cCccc
Confidence            00000000000    000000000000000 112221       122345666778888999999999998865 77777


Q ss_pred             EEEEEecCCCCCCcchhHHH---HHH-HH-HHHHhcCCEEEEeeeEC---CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          419 LVCFRLNPYPHSGSADTEML---NRK-LL-DWVNSTGRVYLTHTIVG---GLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~---~~~-l~-~~l~~~g~~~~~~~~~~---g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      +..|--.......-+.....   .+. .+ +.|.+.|+..+.++.++   |...+|.++. +..    + ..++.++++=
T Consensus       394 MY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiL-p~~----~-~~i~~~~~fH  467 (475)
T KOG0258|consen  394 MYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTIL-PPG----L-EIIEKFKKFH  467 (475)
T ss_pred             eeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeec-Cch----h-HHHHHHHHHH
Confidence            77773221110000000000   001 12 33456787777666654   5688999986 433    3 5555555554


Q ss_pred             HHH
Q 010842          491 DRL  493 (499)
Q Consensus       491 ~~l  493 (499)
                      +++
T Consensus       468 ~~f  470 (475)
T KOG0258|consen  468 AEF  470 (475)
T ss_pred             HHH
Confidence            444

>PRK06149 hypothetical protein; Provisional

Probab=99.34  E-value=5.7e-09  Score=117.36  Aligned_cols=319  Identities=11%  Similarity=0.010  Sum_probs=176.3

Q ss_pred             HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC
Q 010842          130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG  209 (499)
Q Consensus       130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G  209 (499)
                      ...++.+.|++++.-+.+       ..+|++|||+||..|+..||...       | ++.+|......|-...-+..+.+
T Consensus       625 ~~~elae~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~ga~~~s~  689 (972)
T PRK06149        625 AVAEFSERLAALAPDGLD-------TVFLVNSGSEANDLAIRLAWAAS-------G-RRDVVSVLEAYHGWTVATDAVST  689 (972)
T ss_pred             HHHHHHHHHHHhCCCCcC-------EEEEeCCchHHHHHHHHHHHHhc-------C-CCeEEEEeCCCCCcChhHhhhcC
Confidence            344445557777732111       24899999999999999998753       1 23344445555643322222211


Q ss_pred             ----------CCCCCeEEeeCCCC--CCCc-cC-----HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhH
Q 010842          210 ----------VSPANIRALPTSVD--ANFS-LS-----PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEP  267 (499)
Q Consensus       210 ----------~g~~~v~~v~~~~~--~~~~-~d-----~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~  267 (499)
                                ...+.+..++....  ..|. .+     .+++++.++.....+..+.+|++--.....|.+-|    +++
T Consensus       690 ~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~  769 (972)
T PRK06149        690 SIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQ  769 (972)
T ss_pred             CccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHH
Confidence                      10112344443210  1121 12     35666666554444455666666655556688878    999


Q ss_pred             HHHHHHHhCCEEEeeccccchhccCccc-hhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCC
Q 010842          268 LAEVANEYGIWVHVDAAYAGSACICPEF-RHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKN  346 (499)
Q Consensus       268 I~~ia~~~~~~lhvD~A~g~~~~~~~~~-~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~  346 (499)
                      |.++|++||+.+++|.++.|+......+ .....|+ ..|.+++  -|.++..+..|+++++++  +.+.+... .++..
T Consensus       770 l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv-~PDivt~--gK~lg~G~Pl~av~~~~~--i~~~~~~~-~~~~s  843 (972)
T PRK06149        770 VYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGV-VPDIITM--AKGMGNGHPLGAVITRRE--IAEALEAE-GYFFS  843 (972)
T ss_pred             HHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCC-CCCEEEe--cccccCCeeeEEEEEcHH--HHhhhccC-CcccC
Confidence            9999999999999999996653322211 1112355 3798877  688876567888888764  22333221 12111


Q ss_pred             CCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEEcCCCceEEEE
Q 010842          347 KPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PRFEIVVPRHFALVCF  422 (499)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f  422 (499)
                      +              . .+.+..+....++|..+-.+   ++.++..++.++|.+.|+++    |-+.-+. -...++.+
T Consensus       844 T--------------~-~gnP~~~aaala~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vr-G~Gl~~gv  904 (972)
T PRK06149        844 S--------------T-GGSPVSCRIGMAVLDVLREE---KLQENARRVGDHLKARLEALADRHPLIGAVH-GMGLYLGV  904 (972)
T ss_pred             C--------------C-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEe-ecceEEEE
Confidence            0              0 12222223333344444333   35566666667777777653    3221111 11223344


Q ss_pred             EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          423 RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      .+.... .+..........+.+++.++|.++ .+... ...++|+... ...|++||+.++++|.++..+
T Consensus       905 el~~~~-~~~~~~~~~~~~i~~~l~~~Gvl~-~~~g~-~~~vl~~~Pp-l~it~~~id~~~~~l~~~l~~  970 (972)
T PRK06149        905 ELVRDR-QTLEPATEETAAICDRLLELGVIM-QPTGD-HLNILKIKPP-LCLDRESADFFVDMLDRVLTE  970 (972)
T ss_pred             EEecCc-ccCCCChHHHHHHHHHHHhCCeEE-eecCC-CCCEEEEECC-CcCCHHHHHHHHHHHHHHHHh
Confidence            443211 000011234567888899999644 33211 1256898773 568999999999999998764

>PRK09792 4-aminobutyrate transaminase; Provisional

Probab=99.34  E-value=1.6e-08  Score=103.69  Aligned_cols=314  Identities=14%  Similarity=0.097  Sum_probs=173.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      ...+.++.+.|++++..+..      ...+|+++||+|+..|+..||...       | ++.+|.....-|-...-+...
T Consensus        82 ~~~~~~la~~l~~~~p~~~~------~~~~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~s~  147 (421)
T PRK09792         82 YESYVTLAEKINALAPVSGQ------AKTAFFTTGAEAVENAVKIARAHT-------G-RPGVIAFSGGFHGRTYMTMAL  147 (421)
T ss_pred             CHHHHHHHHHHHHhCCCCCC------ceEEEeCChHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCCccHHHHhh
Confidence            33444555667777643211      124889999999999999998642       1 122333344456544333333


Q ss_pred             hCC--------C--CCCeEEeeCCCCCCCcc----CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC-C---hhHHH
Q 010842          208 AGV--------S--PANIRALPTSVDANFSL----SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD-N---VEPLA  269 (499)
Q Consensus       208 ~G~--------g--~~~v~~v~~~~~~~~~~----d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id-~---l~~I~  269 (499)
                      .|.        +  ...+..+|...+.. .+    +++.+++.+++.. ....+.+|++.-..++.|.+- |   +++|.
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~v~~p~~~~-~~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~  225 (421)
T PRK09792        148 TGKVAPYKIGFGPFPGSVYHVPYPSDLH-GISTQDSLDAIERLFKSDI-EAKQVAAIIFEPVQGEGGFNVAPKELVAAIR  225 (421)
T ss_pred             cCCCcccccCCCCCCCCcEEcCCCcccc-cccHHHHHHHHHHHHHhcc-CCCceEEEEEccccCCCCCccCCHHHHHHHH
Confidence            221        1  11345555532211 12    3466776665311 123455677766677778653 5   89999


Q ss_pred             HHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCC
Q 010842          270 EVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPS  349 (499)
Q Consensus       270 ~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~  349 (499)
                      ++|++||+++++|.++.++......+.....++ ..|.+++  -|.++..+..|+++.+++  +.+.+...  ..     
T Consensus       226 ~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~-~pDi~t~--gK~l~~G~pigav~~~~~--i~~~~~~~--~~-----  293 (421)
T PRK09792        226 RLCDEHGIVMIADEVQSGFARTGKLFAMDHYAD-KPDLMTM--AKSLAGGMPLSGVVGNAN--IMDAPAPG--GL-----  293 (421)
T ss_pred             HHHHHcCCEEEEeccccCCCCCCchhHHHhcCC-CCcEEEe--ehhhcCCCceEEEEEcHH--HHhccCCC--Cc-----
Confidence            999999999999999987643221111111122 3676555  698876677888877543  22222110  00     


Q ss_pred             CCCCcccCCCcccCCCCCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEE
Q 010842          350 ESNSVVDFKDWQVGTGRRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCF  422 (499)
Q Consensus       350 ~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f  422 (499)
                                   ..+.....+...   ++++.+..+   +.+++..++.+++.+.|++    .|.+.-+ .-...++.+
T Consensus       294 -------------~~T~~gnpl~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~p~v~~v-rG~Gl~~~i  356 (421)
T PRK09792        294 -------------GGTYAGNPLAVAAAHAVLNIIDKE---SLCERANQLGQRLKNTLIDAKESVPAIAAV-RGLGSMIAA  356 (421)
T ss_pred             -------------CCCCCCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhCCCccee-cccceEEEE
Confidence                         011122334444   444444332   4555566666666666654    3432111 111334555


Q ss_pred             EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          423 RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      .+.+....  .......+.+...+.++|..+. +.. ....++|+.+. ...+++||++++++|.++..
T Consensus       357 e~~~~~~~--~~~~~~~~~l~~~~~~~Gv~i~-~~g-~~~~~irl~P~-l~i~~~ei~~~~~~l~~~l~  420 (421)
T PRK09792        357 EFNDPQTG--EPSAAIAQKIQQRALAQGLLLL-TCG-AYGNVIRFLYP-LTIPDAQFDAAMKILQDALS  420 (421)
T ss_pred             EecCCccC--CcchHHHHHHHHHHHHCCcEEe-ecC-CCCCEEEEeCC-CcCCHHHHHHHHHHHHHHHh
Confidence            55432100  0011346778888999996542 211 11367999873 55899999999999988753

>PRK07482 hypothetical protein; Provisional

Probab=99.33  E-value=7.5e-09  Score=107.10  Aligned_cols=330  Identities=12%  Similarity=0.007  Sum_probs=175.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEc-CCCCchhHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYG-SDQTHSTFAKVC  205 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~-s~~~H~s~~ka~  205 (499)
                      ++.+.++.+.|++++.-+.+       -..|+++||||+-.|+..||......    |. .+..|+. ....|-...-+.
T Consensus        93 ~~~~~~lAe~L~~~~p~~~~-------~v~f~~sGSEAve~AlKlAr~~~~~~----g~~~r~~Ii~~~~~YHG~t~ga~  161 (461)
T PRK07482         93 TEASITLSKRIIDRAPAGMS-------KVYYGLSGSDANETQIKLVWYYNNVL----GRPEKKKIISRWRGYHGSGVVTG  161 (461)
T ss_pred             CHHHHHHHHHHHHhCCCCcC-------EEEEeCchHHHHHHHHHHHHHHHHhc----CCCCCceEEEecCccCCccHhhh
Confidence            45555666778887732111       24899999999999999998653111    11 1233443 444454332222


Q ss_pred             HHhC---------CCCCCeEEeeCCCCCCC-----------ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC--
Q 010842          206 KLAG---------VSPANIRALPTSVDANF-----------SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD--  263 (499)
Q Consensus       206 ~~~G---------~g~~~v~~v~~~~~~~~-----------~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id--  263 (499)
                      .+.|         .....+..+|.....+.           .-++++|++.+...  ....+.+|++.-.....|.+-  
T Consensus       162 s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~  239 (461)
T PRK07482        162 SLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAE--GPDTIAAFIAEPVLGTGGIVPPP  239 (461)
T ss_pred             hccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCcEEEEEECCccCCCCCcCCC
Confidence            2221         11123444443210000           01456777777431  123355555554444456662  


Q ss_pred             --ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCC
Q 010842          264 --NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTD  340 (499)
Q Consensus       264 --~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~  340 (499)
                        =+++|.++|++||+.+++|.++.|+.....-+.....|+. .|.+++  -|.++..+ ..|.++++++  +.+.+...
T Consensus       240 ~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~-PDiv~~--gKgl~gG~~Pi~av~~~~~--i~~~~~~~  314 (461)
T PRK07482        240 AGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIE-PDLITV--AKGLTSAYAPLSGSIVGEK--VWDVLEQG  314 (461)
T ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCC-CCEEEE--ccccccCccccceeeecHH--HHHHHhcc
Confidence              2789999999999999999998877443332222334553 899997  58886654 5777777654  22333211


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEc
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVV  413 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~  413 (499)
                      ...  ..           .+....+-....+...+   +|+.+-.+   +..++..++.++|.+.|++    .|.+.-+ 
T Consensus       315 ~~~--~~-----------~~~h~~T~~gnpl~~Aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v-  377 (461)
T PRK07482        315 SDE--HG-----------AIGHGWTYSGHPICAAAALANLDILERE---NLVGNAAEVGAYFRARLRAAFGDHPLVGEV-  377 (461)
T ss_pred             ccc--CC-----------ccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEE-
Confidence            100  00           00011111223444444   44444333   3455566666777766653    3322111 


Q ss_pred             CCCceEEEEEecCCCC-CCcch-hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          414 PRHFALVCFRLNPYPH-SGSAD-TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       414 ~~~~~~v~f~~~~~~~-~~~~~-~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      .-...++.+.+..... ..... ......++...+.++|.++ ....  +...+|+... ..+|++||+++++++.+..+
T Consensus       378 rG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~-~~~~--~~~~i~~~Pp-l~it~~ei~~~~~~l~~~l~  453 (461)
T PRK07482        378 RGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIA-RAMP--HGDILGFAPP-LVLTRAEADEIVAIAKDAVD  453 (461)
T ss_pred             eeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEE-ecCC--CCCEEEEeCC-CCCCHHHHHHHHHHHHHHHH
Confidence            1122233344432110 00000 1124567888899999543 2211  1256898873 67899999999999999888


Q ss_pred             HHhcc
Q 010842          492 RLFKG  496 (499)
Q Consensus       492 ~l~~~  496 (499)
                      ++.++
T Consensus       454 ~~~~~  458 (461)
T PRK07482        454 EVLGR  458 (461)
T ss_pred             HHHHH
Confidence            76544

>PRK07480 putative aminotransferase; Validated

Probab=99.33  E-value=7.9e-09  Score=106.71  Aligned_cols=329  Identities=11%  Similarity=-0.005  Sum_probs=169.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEE-cCCCCchhHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVY-GSDQTHSTFAKVC  205 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~-~s~~~H~s~~ka~  205 (499)
                      ...+.++.+.|+++++.+.+       ..+|+++||+|+..|+..||......    |. .+..|+ .....|-...-+.
T Consensus        93 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseA~e~AlklAr~~~~~~----g~~~r~~ii~~~~~yHG~tl~a~  161 (456)
T PRK07480         93 HPPAIELAAKLAEVAPPGFN-------HVFFTNSGSEANDTVLRMVRHYWALK----GKPQKKVIISRKNGYHGSTVAGA  161 (456)
T ss_pred             CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhc----CCCCCcEEEEECCCcCCcchhhh
Confidence            34444555667777742211       34899999999999999998753211    11 133333 3444465443333


Q ss_pred             HHhCC-------C--CCCeEEeeCCCC--CCCccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC--
Q 010842          206 KLAGV-------S--PANIRALPTSVD--ANFSLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN--  264 (499)
Q Consensus       206 ~~~G~-------g--~~~v~~v~~~~~--~~~~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~--  264 (499)
                      ...|.       |  ...+..+|....  ..+..+        .+.|++.+.+.  .+..+.+|++--.....|.+.|  
T Consensus       162 s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~vAAvi~EPiqg~gG~~~~~~  239 (456)
T PRK07480        162 SLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL--GADNVAAFIGEPIQGAGGVIIPPA  239 (456)
T ss_pred             hccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCH
Confidence            32221       1  112333432210  000011        25555544321  1234555555544445677755  


Q ss_pred             --hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCc
Q 010842          265 --VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDP  341 (499)
Q Consensus       265 --l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~  341 (499)
                        +++|.++|++||+.+++|.++.|+.....-+.....|+ ..|.+++  -|.++..+ ..|.++.+++  +.+.+....
T Consensus       240 ~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~~--i~~~~~~~~  314 (456)
T PRK07480        240 TYWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGI-KPDLMTI--AKGLTSGYIPMGAVGVGDR--VAEVLIEEG  314 (456)
T ss_pred             HHHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCC-CCCeeee--ehhhccCCccceEEEEcHH--HHHHHhcCC
Confidence              89999999999999999999877633222112222344 3788777  58776543 5777777654  223331111


Q ss_pred             cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHH-HHHHHHHHHHHhcCCCeEEEcC--CCce
Q 010842          342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSD-IRLAKMFEGFVKSDPRFEIVVP--RHFA  418 (499)
Q Consensus       342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~-~~~a~~l~~~L~~~~~~~~~~~--~~~~  418 (499)
                      ..+...             +...+.+..+....++|..+-.++   .+++. .++.++|.+.|+++....++..  -...
T Consensus       315 ~~~~~~-------------~T~~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Gl  378 (456)
T PRK07480        315 GEFNHG-------------FTYSGHPVAAAVALANLRILRDEG---IVERVRDDTGPYLQKRLRELADHPLVGEVRGVGL  378 (456)
T ss_pred             CCcccC-------------CCCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecc
Confidence            111000             001122222233344444443333   44455 3556666666654322211111  1122


Q ss_pred             EEEEEecCCCCC-Cc-chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842          419 LVCFRLNPYPHS-GS-ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       419 ~v~f~~~~~~~~-~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~  496 (499)
                      ++.+.+...... .. .........+..++.++|.++. +.   + ..+|++.. ...|++|||+++++|.++..++.++
T Consensus       379 m~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~-~~---~-~~l~~~Pp-l~it~~eid~~~~~l~~al~~~~~~  452 (456)
T PRK07480        379 VGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMR-AV---G-DRMIISPP-LVITHAEIDELVEKARKALDATAAE  452 (456)
T ss_pred             eEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEe-ec---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            333444221100 00 0112234567778888996542 21   2 35888874 5679999999999999998887554

>PRK07036 hypothetical protein; Provisional

Probab=99.33  E-value=7.4e-09  Score=107.24  Aligned_cols=328  Identities=11%  Similarity=0.052  Sum_probs=174.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      ++.+.++.+.|++++.-+.+       ...|++|||+|+..|+..||...... +..+ +..+|.....-|-...-+..+
T Consensus        94 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~~~~~-g~t~-r~~Ii~~~~~YHG~t~~a~s~  164 (466)
T PRK07036         94 NAPAAELAAKLAELAPGDLN-------HVFLTTGGSTAVDSALRFVHYYFNVR-GRPA-KKHIITRGDAYHGSTYLTASL  164 (466)
T ss_pred             CHHHHHHHHHHHHhCCCCcC-------EEEEeCCchHHHHHHHHHHHHHHHhc-CCCC-ccEEEEEcCccCCccHhhhcc
Confidence            44555566667777632211       35899999999999999998653211 0000 122333344456544333333


Q ss_pred             hCCC---------CCCeEEeeCCCC--CCCccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----
Q 010842          208 AGVS---------PANIRALPTSVD--ANFSLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----  264 (499)
Q Consensus       208 ~G~g---------~~~v~~v~~~~~--~~~~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----  264 (499)
                      .|-.         ...+..+|....  ..+.+.        .+.+++.+..  ..+..+.+|++--.....|.+-|    
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~iAavi~EPv~g~gG~~~p~~~y  242 (466)
T PRK07036        165 TGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILS--LGADNIAAFIAEPILGSGGVIVPPPGY  242 (466)
T ss_pred             cCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHH--cCCCceEEEEEeCCcCCCCCccCCHHH
Confidence            3221         012444443210  001111        2344444432  12345666776666666687766    


Q ss_pred             hhHHHHHHHHhCCEEEeeccccchhccCccchhh-hcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCC--
Q 010842          265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY-LNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTD--  340 (499)
Q Consensus       265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~-~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~--  340 (499)
                      +++|.++|++||+.+++|.++.|+.....-+... ..|+. .|.+++  -|.++..+ .+|.++++++  +.+.+...  
T Consensus       243 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv~-PDivt~--gK~l~gG~~Pi~av~~~~~--i~~~~~~~~~  317 (466)
T PRK07036        243 HARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGIQ-PDIITF--AKGLTSGYQPLGAVIISER--LLDVISGPNA  317 (466)
T ss_pred             HHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCCC-CCEEEE--ccccccCccccEEEEEcHH--HHHHHhcccC
Confidence            9999999999999999999987753322111111 23443 788877  58876553 5788887754  22333211  


Q ss_pred             cc--CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CC
Q 010842          341 PE--YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RH  416 (499)
Q Consensus       341 ~~--yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~  416 (499)
                      +.  |...                 .+-....+.+.+++..+..-.-+++.++..++.++|.+.|+++....++..  -.
T Consensus       318 ~~~~~~~~-----------------~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~  380 (466)
T PRK07036        318 KGNVFTHG-----------------FTYSGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASLRELPLVGDVRGD  380 (466)
T ss_pred             cCcccccC-----------------CCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhccCCCEEEEEee
Confidence            00  1111                 111223444444444432111124666777777888777765422222211  11


Q ss_pred             ceEEEEEecCCCCCC-cch-hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          417 FALVCFRLNPYPHSG-SAD-TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       417 ~~~v~f~~~~~~~~~-~~~-~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      ..++.+.+..+.... ... .......+.+.+.++|.+. .+.   + ..+|++.. ..+|++|||++++++.++.+++.
T Consensus       381 Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~-~~~---~-~~~~l~Pp-l~it~~~id~~~~~l~~al~~~~  454 (466)
T PRK07036        381 HLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLV-RPL---E-HLCVLSPP-LIITRAQIDEIVAILRAAIEETA  454 (466)
T ss_pred             ceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEE-eec---C-CEEEEeCC-CcCCHHHHHHHHHHHHHHHHHHH
Confidence            233444443211000 000 1234567888888999644 221   2 35788763 55799999999999988776653

>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional

Probab=99.33  E-value=5.2e-09  Score=107.16  Aligned_cols=317  Identities=12%  Similarity=0.070  Sum_probs=166.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH---HHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF---AKV  204 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~---~ka  204 (499)
                      +..+.++.+.|+++++...+       ...|+++||||+..|+..||...       | ++.+|-....-|-..   ..+
T Consensus        92 ~~~~~~la~~L~~~~~~~~~-------~v~f~~SGsEA~e~AiklAr~~t-------g-r~~ii~~~~~yHG~td~~~~~  156 (433)
T PRK00615         92 SEQEILFAEELFSYLGLEDH-------KIRFVSSGTEATMTAVRLARGIT-------G-RSIIIKFLGCYHGHADTLLQG  156 (433)
T ss_pred             CHHHHHHHHHHHHhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhh-------C-CCEEEEEcCccCCCCcccCcc
Confidence            34455566778888754322       24899999999999999999753       1 122333333345432   111


Q ss_pred             HHHhCCCCCCe-EEeeCCCCCCC-----ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCCh----hHHHHHHHH
Q 010842          205 CKLAGVSPANI-RALPTSVDANF-----SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNV----EPLAEVANE  274 (499)
Q Consensus       205 ~~~~G~g~~~v-~~v~~~~~~~~-----~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l----~~I~~ia~~  274 (499)
                      ....+-..... ...+......+     .-|+++|++.+.+.   +..+.+|++.-.....|.+-|.    ++|.++|++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~  233 (433)
T PRK00615        157 ISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSL---GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRR  233 (433)
T ss_pred             cccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhc---CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHH
Confidence            11111100000 00000000000     12789999988642   2335566666666667887664    599999999


Q ss_pred             hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842          275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV  354 (499)
Q Consensus       275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  354 (499)
                      ||+.+++|.++.|+ ...........++ ..|.+++  -|.++..+.+|+++.+++  +.+.+... .+....       
T Consensus       234 ~g~llI~DEv~tG~-R~G~~ga~~~~gv-~PDi~~~--gK~lggG~p~~av~~~~~--i~~~~~~~-~~~~~~-------  299 (433)
T PRK00615        234 TGSLSIMDEVVTGF-RVAQGGAAAIYHV-KPDITVY--GKILGGGLPAAAVVAHKS--IMDHLAPE-GTIFQA-------  299 (433)
T ss_pred             cCCEEEEEcccccc-cccHhHHHHhcCC-CCCeEEE--cccccCCcceeeeeecHH--HHhhhcCC-CCcccC-------
Confidence            99999999999665 2222111122344 3788775  788875556788877654  22333211 111000       


Q ss_pred             ccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCe--EEEcCCCceEEEEEecCCCC
Q 010842          355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD---PRF--EIVVPRHFALVCFRLNPYPH  429 (499)
Q Consensus       355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~--~~~~~~~~~~v~f~~~~~~~  429 (499)
                            +.-.+.+..+....++|..+..+   ...++..++.++|.+.|++.   .++  ....  ...++.+.+.....
T Consensus       300 ------~T~~g~p~~~aa~la~L~~i~~~---~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r--~G~~~~i~~~~~~~  368 (433)
T PRK00615        300 ------GTLSGNPLAMAAGKASINLCREQ---GFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR--YGSMFSFFFNENRP  368 (433)
T ss_pred             ------CCCcccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe--eceEEEEEEeCCCC
Confidence                  00011122223334444444332   34566666666665555431   123  2222  22334444432110


Q ss_pred             CC--cc--hhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          430 SG--SA--DTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       430 ~~--~~--~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      ..  +.  .......++...+.++|.. +.+..+.. .    .+ +...|++|||++++++.++++.+.
T Consensus       369 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~-~~~~~~~~-~----~l-s~~ht~~did~~~~a~~~~~~~~~  430 (433)
T PRK00615        369 NNLAEAQLSDIEAFQTFYQSAFSKGVY-LSPSPFEA-S----FL-SSAHSMENLDYAQNVLIDSLEKVF  430 (433)
T ss_pred             CChHHHhhCCHHHHHHHHHHHHHCCee-ecCccccc-c----ce-ecCCCHHHHHHHHHHHHHHHHHHh
Confidence            00  00  0133456788889999953 33322111 1    22 355699999999999999988764

>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]

Probab=99.31  E-value=2.8e-10  Score=104.89  Aligned_cols=320  Identities=12%  Similarity=0.123  Sum_probs=179.6

Q ss_pred             CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcC-CC
Q 010842          118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGS-DQ  196 (499)
Q Consensus       118 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s-~~  196 (499)
                      ...|....+-+.+-+.+..++.+-+|+.-+.     -+..+|+|+..+.+......-.+.     .+|..+ .|+.+ .+
T Consensus        67 ~cnY~~pQG~~~li~ala~~l~~~ygwnit~-----~NIalTnGSQs~fFYlfNlF~G~~-----sdG~~k-~illPLaP  135 (417)
T COG3977          67 LCNYDGPQGKAVLIDALAKMLRREYGWNITA-----QNIALTNGSQSAFFYLFNLFAGRR-----SDGTEK-KILLPLAP  135 (417)
T ss_pred             HhcCCCCcchhHHHHHHHHHHHHHhCCCCcc-----ceeeecCCccchHHHHHHHhcCcc-----CCCcce-eEeeccCh
Confidence            4457777788889999999999999996432     256788887777766654332111     112222 23333 11


Q ss_pred             CchhHHHHHHHhCCCCCCeEEe------eCCCCC--CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CCh
Q 010842          197 THSTFAKVCKLAGVSPANIRAL------PTSVDA--NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNV  265 (499)
Q Consensus       197 ~H~s~~ka~~~~G~g~~~v~~v------~~~~~~--~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l  265 (499)
                      .+..      +.++|.+.=.+|      ...+.+  .|++|.++|+-.  +.+      -+|+++-++|+||.+   +.+
T Consensus       136 eYiG------Y~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~--e~~------g~ic~SRPtNPTGNVlTdeE~  201 (417)
T COG3977         136 EYIG------YADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHIG--EST------GAICVSRPTNPTGNVLTDEEL  201 (417)
T ss_pred             hhcc------ccccccCccceeeccCCcccccccceeeccCHHHcccc--ccc------ceEEecCCCCCCCCcccHHHH
Confidence            2211      222222211222      122223  278888888533  333      389999999999999   668


Q ss_pred             hHHHHHHHHhCCEEEeeccccchhcc--CccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccC
Q 010842          266 EPLAEVANEYGIWVHVDAAYAGSACI--CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEY  343 (499)
Q Consensus       266 ~~I~~ia~~~~~~lhvD~A~g~~~~~--~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~y  343 (499)
                      .+|.++|++||+++++|.|||-.+--  .......   +..--..++|..|.+....-||+++-.++  +.++++....-
T Consensus       202 ~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~---w~~NiilC~SLSK~GLPG~R~GIiIane~--viqaitnmn~i  276 (417)
T COG3977         202 AKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPL---WNENIILCMSLSKLGLPGSRCGIIIANEK--VIQAITNMNGI  276 (417)
T ss_pred             HHHHHHhhhcCCcEEEecccCCCCCceeccccccc---CCCCEEEEeehhhcCCCCcceeEEEccHH--HHHHHHhccce
Confidence            88999999999999999999764311  1111111   11233578899998876667888775543  22444332111


Q ss_pred             CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHH----HHHhcHHHHHHHHHHHHH-HHHHHHHHHhcCCCeEEEcCCCce
Q 010842          344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMV----LRSYGVLNLQSHIRSDIR-LAKMFEGFVKSDPRFEIVVPRHFA  418 (499)
Q Consensus       344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~----l~~~g~~g~~~~~~~~~~-~a~~l~~~L~~~~~~~~~~~~~~~  418 (499)
                      +                ++.-+|-..|+..-+.    |..+...-++-..++..+ .-..++..|-+. .+.+ ..|+..
T Consensus       277 i----------------sLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~-~~~i-HkpEGA  338 (417)
T COG3977         277 I----------------SLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEY-RCLI-HKPEGA  338 (417)
T ss_pred             e----------------eecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcc-ceee-ecCCcc
Confidence            1                1112222223222111    111211212211111111 122333333332 2333 356656


Q ss_pred             EEEE-EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE---------CCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          419 LVCF-RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV---------GGLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       419 ~v~f-~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---------~g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      ++.+ ++.+..        -.+..+.++|.+.|.+++.+..+         +...|+|++..   -+++.|+.-+..|.+
T Consensus       339 IFlWLWf~dLP--------Itt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~---~~~~~ie~Gva~lae  407 (417)
T COG3977         339 IFLWLWFKDLP--------ITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYV---PEPEKIEKGVAILAE  407 (417)
T ss_pred             eeehhhhccCC--------CCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEecC---CCHHHHHHHHHHHHH
Confidence            5543 443321        12678899999999887765543         23478998875   577889999999988


Q ss_pred             HHHHHhcc
Q 010842          489 GADRLFKG  496 (499)
Q Consensus       489 ~~~~l~~~  496 (499)
                      ..+++..+
T Consensus       408 ~ve~~yq~  415 (417)
T COG3977         408 EVERAYQE  415 (417)
T ss_pred             HHHHHHhc
Confidence            88877654

>PRK07481 hypothetical protein; Provisional

Probab=99.31  E-value=1.5e-08  Score=104.57  Aligned_cols=334  Identities=13%  Similarity=0.060  Sum_probs=173.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      +..+.++.+.|+++++-+.-      ....|+++||||+..|+..||...... +..| +..+|......|-...-+...
T Consensus        85 ~~~~~~lae~L~~~~~~~~~------~~v~f~~sGsEAve~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~ga~s~  156 (449)
T PRK07481         85 HPRAIELSYELIDMFAPEGM------RRVFFSSGGSDSVETALKLARQYWKVR-GQPE-RTKFISLKQGYHGTHFGGASV  156 (449)
T ss_pred             CHHHHHHHHHHHHhcCCCCC------CEEEEcCchHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCcchhhhcc
Confidence            34445566668888742111      134899999999999999998753211 1001 122344444456544333332


Q ss_pred             hCC-------C--CCCeEEeeCCCCC--CCc-cCHHHHHHHHHHH----H--HcCCccEEEEEecCCCcccccCC----h
Q 010842          208 AGV-------S--PANIRALPTSVDA--NFS-LSPQLLRRAVEAD----V--EAGLVPLFLCATVGTTSTTAVDN----V  265 (499)
Q Consensus       208 ~G~-------g--~~~v~~v~~~~~~--~~~-~d~~~L~~~i~~~----~--~~g~~p~~vv~t~gtt~~G~id~----l  265 (499)
                      .|-       +  ...+..++....-  .|. -|++.+++.+.+.    .  ..+..+.+|++--.....|.+-|    +
T Consensus       157 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl  236 (449)
T PRK07481        157 NGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFW  236 (449)
T ss_pred             CCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHH
Confidence            221       0  1123444332100  011 2555554433221    1  12234566666655555676644    8


Q ss_pred             hHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCccCC
Q 010842          266 EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDPEYL  344 (499)
Q Consensus       266 ~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~~yl  344 (499)
                      +++.++|++||+.+++|.++.|+.....-+.....++. .|.+++  -|.++..+ ..|.++++++  +.+.+...... 
T Consensus       237 ~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~-PDiv~~--gKgl~gG~~Pi~av~~~~~--i~~~~~~~~~~-  310 (449)
T PRK07481        237 PLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVK-PDIMCL--AKGITSGYVPLGATMVNAR--IADAFEANADF-  310 (449)
T ss_pred             HHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCC-CCEEEE--eecccCCCcCceEEEEcHH--HHHHHhccCcc-
Confidence            99999999999999999998776332221112223443 788888  58776553 5788888764  22333221100 


Q ss_pred             CCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC--CCceEEE
Q 010842          345 KNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP--RHFALVC  421 (499)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~--~~~~~v~  421 (499)
                       ..        .+   ....+.....+.+.+++..+..-.-++..++..++.++|.+.|+++. ...++..  -...++.
T Consensus       311 -~~--------~~---~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~g  378 (449)
T PRK07481        311 -GG--------AI---MHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLA  378 (449)
T ss_pred             -cc--------cc---ccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEE
Confidence             00        00   00111122344444444433211112455666677777777776542 1222211  1122334


Q ss_pred             EEecCCC-CCCc-chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          422 FRLNPYP-HSGS-ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       422 f~~~~~~-~~~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +.+.... .... .........+.+++.++|.++ .+.   + ..+|++.. ...|++|||++++++.++.+++
T Consensus       379 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~-~~~---g-~~i~l~Pp-l~it~~eid~~~~~l~~~l~~~  446 (449)
T PRK07481        379 LDLVADKATREPIDPSKGYANAVADVARENGVLV-RPS---G-TKIILSPP-LVIQREDVDRIVDALDAGLSAV  446 (449)
T ss_pred             EEecccccccCCCCchhHHHHHHHHHHHhCCeEE-Eec---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHhc
Confidence            4443211 0000 001234567888888899543 221   2 24788763 5579999999999999988765

>PRK06918 4-aminobutyrate aminotransferase; Reviewed

Probab=99.30  E-value=1.7e-08  Score=104.46  Aligned_cols=320  Identities=14%  Similarity=0.064  Sum_probs=167.0

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      ...+.++.+.|++++.-+..      ....|+++||||+..|+..||...       | ++.+|-.....|-...-+..+
T Consensus        96 ~~~~~~la~~L~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~ls~  161 (451)
T PRK06918         96 YEPYIELAEKLAALAPGSFD------KKVLFLNSGAEAVENAVKIARKYT-------K-RQGIISFSRGFHGRTLMTMTM  161 (451)
T ss_pred             cHHHHHHHHHHHHhCCCCCC------CEEEEcCCcHHHHHHHHHHHHHHh-------C-CCcEEEECCCcCccchhhhhh
Confidence            34455566678888743210      024899999999999999998753       1 222333344456554444333


Q ss_pred             hCC--------C--CCCeEEeeCCCC--CCCccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCccccc----C
Q 010842          208 AGV--------S--PANIRALPTSVD--ANFSLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----D  263 (499)
Q Consensus       208 ~G~--------g--~~~v~~v~~~~~--~~~~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d  263 (499)
                      .|-        +  ...+..+|....  ....+.        .+.+++.+.... .+..+.+|++.-.....|.+    +
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~EPi~g~gG~~~~~~~  240 (451)
T PRK06918        162 TSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEV-APETIAAVVMEPVQGEGGFIVPSKK  240 (451)
T ss_pred             cCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhc-CCCceEEEEECcccCCCCCccCCHH
Confidence            221        1  112444443210  000111        123333332111 12234445444433334554    2


Q ss_pred             ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccC
Q 010842          264 NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEY  343 (499)
Q Consensus       264 ~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~y  343 (499)
                      -+++|.++|++||+|+++|.+|.++......+.....++ ..|.++  .-|.++..+..|+++.+.+  +.+.+...   
T Consensus       241 ~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v-~pDi~t--~sK~l~~G~pig~v~~~~~--i~~~~~~~---  312 (451)
T PRK06918        241 FVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDV-VPDLIT--VSKSLGAGVPISGVIGRKE--IMDESAPG---  312 (451)
T ss_pred             HHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCC-CCCEEe--eehhhcCCCccEEEEEcHH--HHhccCCC---
Confidence            288999999999999999999987643221111111122 267554  5788876677899887643  22222110   


Q ss_pred             CCCCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCC
Q 010842          344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRH  416 (499)
Q Consensus       344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~  416 (499)
                      ..                 ..+-....+...+   ++..+..+.   ..++..++.+++.+.|++    .|.+.-+ ...
T Consensus       313 ~~-----------------~~T~~g~~l~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~l~~l~~~~~~~~~v-rg~  371 (451)
T PRK06918        313 EL-----------------GGTYAGSPLGCAAALAVLDIIEKEN---LNDRAIELGKVVMNRFEEMKNKYNCIGDV-RGL  371 (451)
T ss_pred             Cc-----------------CcCCCcCHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHHhhCCCceee-ccc
Confidence            00                 0011112344444   444332333   334444555555555544    3322212 223


Q ss_pred             ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      ..++.+.+..+.. ..........++.+.+.++|..+.....+ + .++|+++. ...|+++|++++++|.++++++..
T Consensus       372 G~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~-~-~~lrl~p~-l~~t~~~id~~l~~l~~~l~~~~~  446 (451)
T PRK06918        372 GAMCAFELVQDRK-TKEPDKTLTANICKEANKRGLLLLSAGTY-G-NVIRVLMP-LVITDEQLEEGLTIIEESLQACYE  446 (451)
T ss_pred             eeEEEEEEccCCC-cCCCcHHHHHHHHHHHHHCCeEEeecCCC-C-CEEEEECC-CccCHHHHHHHHHHHHHHHHHHHH
Confidence            3444444421100 00001244677888888899765443222 2 56999983 457899999999999999987643

>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=99.29  E-value=5.9e-09  Score=106.94  Aligned_cols=311  Identities=10%  Similarity=0.004  Sum_probs=168.3

Q ss_pred             HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCC
Q 010842          131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGV  210 (499)
Q Consensus       131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~  210 (499)
                      ..++.+.++++++-+-+       ...++.+||+|+..|+..||...... +..+ ++.+|..+...|-...-+..+.|-
T Consensus        90 ~~~la~~l~~~~~~~~~-------~v~f~~sGseA~e~AlklAr~~~~~~-~~~~-r~~il~~~~~yHG~t~~~~s~~~~  160 (427)
T TIGR00508        90 AIELCQKLVKMTPNALD-------CVFLADSGSVAVEVALKMALQYWQAK-GEKN-RQKFLTIRSGYHGDTFGAMSVCDP  160 (427)
T ss_pred             HHHHHHHHHhhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhh-CCCC-ccEEEEEcCCcCCccHhhhcccCC
Confidence            34455668887743212       35899999999999999999764221 0001 223444555556544333333221


Q ss_pred             ----------CCCCeEEeeCCCCCCC-----ccCHHHHHHHHHHHHHcCCccEEEEEecC-CCcccc----cCChhHHHH
Q 010842          211 ----------SPANIRALPTSVDANF-----SLSPQLLRRAVEADVEAGLVPLFLCATVG-TTSTTA----VDNVEPLAE  270 (499)
Q Consensus       211 ----------g~~~v~~v~~~~~~~~-----~~d~~~L~~~i~~~~~~g~~p~~vv~t~g-tt~~G~----id~l~~I~~  270 (499)
                                ....+..+|.... .+     .-|++++++.+.+.   +..+.+|++--. ....|.    .+++++|.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~l~~~l~~~---~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~  236 (427)
T TIGR00508       161 ENSMHSLYKGYLPEQIFAPAPQN-RFDEEWNEEAITPLAKLMELH---SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQA  236 (427)
T ss_pred             cccccccccccCCCCeEcCCCCc-cccchhHHHHHHHHHHHHHhc---CCcEEEEEEechhcCcCCcccCCHHHHHHHHH
Confidence                      0012223332211 11     11567777777532   223334444432 333332    377999999


Q ss_pred             HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCC--ccCCCCC
Q 010842          271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTD--PEYLKNK  347 (499)
Q Consensus       271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~--~~yl~~~  347 (499)
                      +|++||+.+++|.++.|+.....-+.....++ ..|.+++  -|.++..+ .++.++.+++  +.+.+...  ..+....
T Consensus       237 lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v-~pDi~~~--gK~l~gG~~p~~a~~~~~~--~~~~~~~~~~~~~~~~~  311 (427)
T TIGR00508       237 LCKQYDILLIADEIATGFGRTGKLFACEHAGV-VPDILCV--GKALTGGYMTLSATVTTDK--VAQTISSGEAGCFMHGP  311 (427)
T ss_pred             HHHHcCCEEEEeccccCCCcCCccchhhhcCC-CCCEEEe--chhhhcCcccceEEEEcHH--HHHHHhcCCCCccccCC
Confidence            99999999999999865422111111112344 3787775  78876553 4677766543  22333221  1111110


Q ss_pred             CCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCceEEEEEec
Q 010842          348 PSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFALVCFRLN  425 (499)
Q Consensus       348 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v~f~~~  425 (499)
                                   +. .+.+..+....++++.+..+   +..++..++.++|.+.|+++.....+..  ....++.+.+.
T Consensus       312 -------------T~-~g~p~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~  374 (427)
T TIGR00508       312 -------------TF-MGNPLACAVAEASLAILLEG---EWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMY  374 (427)
T ss_pred             -------------CC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEEC
Confidence                         00 12222233344445544322   3467777888888888876532111111  12344455553


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      ...         ....+.+++.++|..+ .+.   + ..+|++.. ..+|++|||++++++.+...
T Consensus       375 ~~~---------~~~~~~~~l~~~Gv~~-~~~---~-~~l~~~pp-l~~t~~~id~~~~~l~~~l~  425 (427)
T TIGR00508       375 KPV---------NVEELQKKFVEQGVWI-RPF---G-KLIYVMPP-YIITTEQLQKLTAALIEALH  425 (427)
T ss_pred             Ccc---------CHHHHHHHHHHCCeEE-Eec---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHh
Confidence            221         1356788888889543 322   1 35898873 66899999999999998864

All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.

>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.29  E-value=9e-09  Score=105.45  Aligned_cols=318  Identities=10%  Similarity=0.025  Sum_probs=173.5

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      ..+.++.+.|++++..+.+       ...|+++||+|+-.|+..||.....+ +..+ ++.+|......|-...-+..+.
T Consensus        87 ~~~~~lae~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~a~s~~  157 (429)
T PRK06173         87 EPAVELAQKLLEILPPSLN-------KIFFADSGSVAVEVAMKMALQYQQAK-GEVQ-RTKFATIRSGYHGDTWHAMSVC  157 (429)
T ss_pred             HHHHHHHHHHHhhCCCCcC-------EEEEeCCchHHHHHHHHHHHHHHHHh-CCCC-CcEEEEECCCcCCcchhhhccC
Confidence            3445555667777632111       34899999999999999999753221 1001 1223344444565433232221


Q ss_pred             C--------C--CCCCeEEeeCCCCC---CC-ccCHHHHHHHHHHHHHcCCccEEEEEecC-CCccccc----CChhHHH
Q 010842          209 G--------V--SPANIRALPTSVDA---NF-SLSPQLLRRAVEADVEAGLVPLFLCATVG-TTSTTAV----DNVEPLA  269 (499)
Q Consensus       209 G--------~--g~~~v~~v~~~~~~---~~-~~d~~~L~~~i~~~~~~g~~p~~vv~t~g-tt~~G~i----d~l~~I~  269 (499)
                      |        .  ....+..+|.....   .+ .-+++.|++.+..   .+..+.+|++--. ....|.+    +=+++|.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~---~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~  234 (429)
T PRK06173        158 DPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQ---KGDEIAALILEPVVQGAGGMYFYSPTYLVKAR  234 (429)
T ss_pred             CCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHh---CCCcEEEEEEcchhhccCCcccCCHHHHHHHH
Confidence            1        1  01123445432110   00 1146667777753   2234545555442 3444555    2279999


Q ss_pred             HHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCc--cCCCC
Q 010842          270 EVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDP--EYLKN  346 (499)
Q Consensus       270 ~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~--~yl~~  346 (499)
                      ++|++||+++++|.++.|+.....-+.....++ ..|.+++  -|.++..+ .++.++.+++  +.+.+....  .+...
T Consensus       235 ~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~p~~a~~~~~~--i~~~~~~~~~~~~~~~  309 (429)
T PRK06173        235 ELCDQYGVLLIFDEIATGFGRTGKLFALEHAGV-VPDIMCI--GKALTGGYLTLSATITTEA--IAQTICSGEAKCFMHG  309 (429)
T ss_pred             HHHHHcCCeEEecchhcCCCcCCcchHHHhcCC-CCCEEEe--ehhhhCCccccceEEecHH--HHHHHhcCCCCccccC
Confidence            999999999999999866422111111112344 3788874  78876553 5777777654  223332110  01111


Q ss_pred             CCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCceEEEEEe
Q 010842          347 KPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFALVCFRL  424 (499)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v~f~~  424 (499)
                      .             |. .+.+..+....++|+.+-.+   ...++..++.++|.+.|+++.++..+.+  ....++.+.+
T Consensus       310 ~-------------T~-~g~p~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel  372 (429)
T PRK06173        310 P-------------TF-MANPLACAIAAESIRLLLES---PWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEM  372 (429)
T ss_pred             C-------------CC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEe
Confidence            0             00 11222233444455554333   3466777888888888875433332222  2334555555


Q ss_pred             cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      ....         ....+.+.+.++|..+ .+.   + ..+|+... ...|++||++++++|.++..++.+
T Consensus       373 ~~~~---------~~~~i~~~l~e~Gi~v-~~~---g-~~l~~~Pp-l~it~~ei~~~~~~l~~~l~~~~~  428 (429)
T PRK06173        373 KEPV---------NMATLQPRFVEHGIWV-RPF---G-KLVYIMPP-FIISPDELSQLTSGLLRVLKQEYN  428 (429)
T ss_pred             CCcc---------cHHHHHHHHHHCCeEE-Eec---C-CEEEEeCC-ccCCHHHHHHHHHHHHHHHHHHhc
Confidence            4321         1456788888888543 322   2 47999884 778999999999999999887654

>PRK06148 hypothetical protein; Provisional

Probab=99.29  E-value=2.7e-08  Score=112.14  Aligned_cols=324  Identities=12%  Similarity=0.078  Sum_probs=177.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      ...+.++.+.|++++.-+.+       -..|++||||||..|+..||...       | ++.+|.....-|-...-+..+
T Consensus       662 ~~~~~~lAe~L~~~~p~~~~-------~v~f~nSGsEA~e~AlklAr~~t-------G-r~~ii~~~~~YHG~t~~a~s~  726 (1013)
T PRK06148        662 HDAIVAYAERLTATLPDGLT-------VAFFVNSGSEANSLALRLARAHT-------G-QRDAIVLDHAYHGTTTELIDL  726 (1013)
T ss_pred             CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHhc-------C-CCeEEEEcCCccCCCcchhhc
Confidence            34455556668877742212       24899999999999999999753       1 122333344445443322222


Q ss_pred             h--------CCC-CCCeEEeeCCC--CCCCc-cC-------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----
Q 010842          208 A--------GVS-PANIRALPTSV--DANFS-LS-------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----  264 (499)
Q Consensus       208 ~--------G~g-~~~v~~v~~~~--~~~~~-~d-------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----  264 (499)
                      .        +.+ ...+..++...  ...|. -+       .+.+++.++.....+..+.+|++--....-|.+-|    
T Consensus       727 s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~y  806 (1013)
T PRK06148        727 SPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGY  806 (1013)
T ss_pred             CchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHH
Confidence            1        111 12333333211  01111 11       24566666543333445666666655555677766    


Q ss_pred             hhHHHHHHHHhCCEEEeeccccchhccCcc-chhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccC
Q 010842          265 VEPLAEVANEYGIWVHVDAAYAGSACICPE-FRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEY  343 (499)
Q Consensus       265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~-~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~y  343 (499)
                      ++++.++|++||+.+++|.++.|+...... +.....|+ ..|.+++  -|.++..+..|.++.+++  +.+.+.....+
T Consensus       807 l~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv-~PDivt~--gK~lggG~Plgav~~~~e--i~~~~~~g~~~  881 (1013)
T PRK06148        807 LREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGV-VPDIVTM--GKPIGNGHPMGAVVTTRE--IADSFDNGMEY  881 (1013)
T ss_pred             HHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCC-Ccceeee--cccccCCcceEEEEEcHH--HHhhccCCCcc
Confidence            899999999999999999998776433221 11222354 3898888  688877678899988753  22333211001


Q ss_pred             CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC--CCceEE
Q 010842          344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP--RHFALV  420 (499)
Q Consensus       344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~--~~~~~v  420 (499)
                      . +               .-.+.+..+....++|..+..+   +..++..++.++|.+.|+++. ...++..  -...++
T Consensus       882 ~-~---------------Tf~gnpla~aaa~a~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~  942 (1013)
T PRK06148        882 F-N---------------TFGGNPVSCAIGLAVLDIIEDE---DLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFL  942 (1013)
T ss_pred             c-c---------------CCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEE
Confidence            0 0               0112222222333344444333   355666677777777776531 1111111  112233


Q ss_pred             EEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          421 CFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       421 ~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      .+.+..+.. +.+........+.+++.++|.++ .+... ...++|+... ..+|++|||+++++|.++..++.
T Consensus       943 gvel~~~~~-~~~~~~~~~~~i~~~~~~~Gvl~-~~~g~-~~~vlr~~Pp-l~it~~~id~~l~~l~~~l~~~~ 1012 (1013)
T PRK06148        943 GIELVTDRK-TKAPATAIARYVKNGARERGILI-GTEGP-HDNVLKIRPP-LIFSRADADHLLEVLDDVLAAAL 1012 (1013)
T ss_pred             EEEecCCcc-ccCccHHHHHHHHHHHHhCCeEE-eccCC-CCCEEEEeCC-ccCCHHHHHHHHHHHHHHHHHHh
Confidence            444432110 00111345677888899999654 32211 1266999884 77899999999999999987764

>PRK06917 hypothetical protein; Provisional

Probab=99.29  E-value=3.4e-08  Score=101.85  Aligned_cols=334  Identities=10%  Similarity=0.018  Sum_probs=174.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEE-cCCCCchhHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVY-GSDQTHSTFAKVC  205 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~-~s~~~H~s~~ka~  205 (499)
                      ++.+.++.+.|++++....+       ..+|+++||+|+..|+..||......    |. .+..|+ ....-|-...-+.
T Consensus        73 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~~~~r----g~t~r~~ii~~~~~yHG~t~~al  141 (447)
T PRK06917         73 SEPAEKLAKKLSDLSPGDLN-------WSFFVNSGSEANETAMKIAIQHFQER----GIQGKHKILSRWMSYHGITMGAL  141 (447)
T ss_pred             CHHHHHHHHHHHHhCCCCCC-------EEEEeCChHHHHHHHHHHHHHHHHhc----CCCCCCEEEEECCCcCCccHHHH
Confidence            45556667778888743222       24889999999999999998753221    11 233343 3444465544444


Q ss_pred             HHhCCCC---------CCeEEeeCCCCCCCc----------cCHHHHHHHHHHHHHcCCccEEEEEecCCCcc-cccC--
Q 010842          206 KLAGVSP---------ANIRALPTSVDANFS----------LSPQLLRRAVEADVEAGLVPLFLCATVGTTST-TAVD--  263 (499)
Q Consensus       206 ~~~G~g~---------~~v~~v~~~~~~~~~----------~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~-G~id--  263 (499)
                      ...|...         ..+..+|........          -+.+.|++.++...  ...+.+|++.-..... |.+-  
T Consensus       142 s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~iAAvi~EPi~g~~gG~~~p~  219 (447)
T PRK06917        142 SMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIG--AEHIAAFIAEPIIGAAGAAVVPP  219 (447)
T ss_pred             HhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcC--CCceEEEEEeccccCcCceecCC
Confidence            4433210         122333321100000          02456666665311  1234455554433323 3442  


Q ss_pred             --ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCC
Q 010842          264 --NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTD  340 (499)
Q Consensus       264 --~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~  340 (499)
                        =+++|.++|++||+.+++|.++.|+.....-+.....++. .|.+++  -|.++..+ ..|++..+++  +.+.+...
T Consensus       220 ~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~-PDi~~~--gK~l~~G~~Pi~a~~~~~~--i~~~~~~~  294 (447)
T PRK06917        220 KGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVE-PDIMTL--GKGLGAGYTPIAATVVSDR--VMEPILRG  294 (447)
T ss_pred             HHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCC-CCEEEe--eehhccCCcceEEEEEcHH--HHHHHhcc
Confidence              2799999999999999999998775332222222223443 788777  68887654 5778777653  22333221


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC--CCc
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP--RHF  417 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~--~~~  417 (499)
                      ...+....             ...+.+.......++++.+..+   +..++..++.++|.+.|+++. ...++..  -..
T Consensus       295 ~~~~~~~~-------------T~~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~G  358 (447)
T PRK06917        295 SRSIMSGH-------------TLSANPLSAATALAVLEYMEKH---NLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKG  358 (447)
T ss_pred             Cccccccc-------------CCCCCHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecc
Confidence            11111100             0111222223333444444333   355666677777777766531 1212211  112


Q ss_pred             eEEEEEecCCCC-CCc-chhHHHHHHHHHHHHhcCCEEEEeee---ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          418 ALVCFRLNPYPH-SGS-ADTEMLNRKLLDWVNSTGRVYLTHTI---VGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       418 ~~v~f~~~~~~~-~~~-~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      .++.+.+..+.. .+. .........+...+.++|.++.....   -.....+|++.. ..+|++||+.+++++.++.++
T Consensus       359 l~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Pp-l~it~~eid~~~~~l~~~l~~  437 (447)
T PRK06917        359 LLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPP-MTITYSELDELLSIFAKSVEE  437 (447)
T ss_pred             eEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECC-CcCCHHHHHHHHHHHHHHHHH
Confidence            233344422110 000 01124567788889999965432110   011357898873 668999999999999999988


Q ss_pred             Hhcc
Q 010842          493 LFKG  496 (499)
Q Consensus       493 l~~~  496 (499)
                      +.++
T Consensus       438 ~~~~  441 (447)
T PRK06917        438 MMQK  441 (447)
T ss_pred             HHHh
Confidence            7554

>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.28  E-value=2.2e-08  Score=103.28  Aligned_cols=326  Identities=10%  Similarity=0.065  Sum_probs=177.0

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      ....++.+.|+++++-+..       ..+|+++||+|+..|+..||.....+ +..+ +..+|......|-...-+..+.
T Consensus        97 ~~~~~lAe~L~~~~p~~~~-------~v~f~~sGseAve~AlKlA~~~~~~r-g~~~-r~~Ii~~~~~yHG~t~gals~~  167 (453)
T PRK06943         97 EPAIELAERLAALTGGTLG-------HAFFASDGASAVEIALKMSFHAWRNR-GRGD-KREFVCLANGYHGETIGALGVT  167 (453)
T ss_pred             HHHHHHHHHHHHhCCCCCC-------EEEEeCCCHHHHHHHHHHHHHHHHHh-CCCC-CCEEEEECCCcCCCcHHhhccc
Confidence            3444556668887753212       24899999999999999998653211 0001 1223444444565443333333


Q ss_pred             CCC---------CCCeEEeeCCCCCC--Cc--------cCHHHHHHHHHHHHHcCCccEEEEEec-CCCcccccC----C
Q 010842          209 GVS---------PANIRALPTSVDAN--FS--------LSPQLLRRAVEADVEAGLVPLFLCATV-GTTSTTAVD----N  264 (499)
Q Consensus       209 G~g---------~~~v~~v~~~~~~~--~~--------~d~~~L~~~i~~~~~~g~~p~~vv~t~-gtt~~G~id----~  264 (499)
                      |-.         ...+..+|......  +.        -++++|++.++.   .+..+.+|++.- .....|.+-    =
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAviiEPvvqg~gG~~~~~~~y  244 (453)
T PRK06943        168 DVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAE---RAGKIAALIVEPLVQCAAGMAMHDPSY  244 (453)
T ss_pred             CChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEeccccccCCcccCCHHH
Confidence            210         01234454321100  00        134667777652   223455555543 234456652    2


Q ss_pred             hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCccC
Q 010842          265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDPEY  343 (499)
Q Consensus       265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~~y  343 (499)
                      ++++.++|++||+.+++|.++.|+.....-+.....|+. .|.+++  -|.++..+ ..|.++++++  +.+.+..... 
T Consensus       245 l~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~-PDivt~--gKgl~gG~~Pi~av~~~~e--i~~~~~~~~~-  318 (453)
T PRK06943        245 LRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVW-PDFLCL--SKGISGGYLPLSLVLSRDA--IFAAFYDDDV-  318 (453)
T ss_pred             HHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCC-CCeEee--ehhhccCcccceEEEEcHH--HHHhhcccCc-
Confidence            799999999999999999998776433222222223553 899998  58776653 6888888764  2233321100 


Q ss_pred             CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEcCCCceEE
Q 010842          344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD---PRFEIVVPRHFALV  420 (499)
Q Consensus       344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v  420 (499)
                       ..            .+....+....++...+++..+..-.-++.+++..++.++|.+.|+++   |.+.-+. -...++
T Consensus       319 -~~------------~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~v~~vr-G~Gl~~  384 (453)
T PRK06943        319 -TR------------GFLHSHSYTGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPLAAHPQVRHLR-QRGTIF  384 (453)
T ss_pred             -cC------------CccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCEEeEe-ccccEE
Confidence             00            000111222234554444444321111235566677777777777654   3332111 112233


Q ss_pred             EEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842          421 CFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       421 ~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~  496 (499)
                      .+.+....    ........++.+++.++|.++ .+.   + ..+|++.. ...|++||++++++|.+..+++..+
T Consensus       385 gvel~~~~----~~~~~~~~~i~~~~~~~Gll~-~~~---g-~~l~~~Pp-l~it~~eid~~~~~l~~al~~~~~~  450 (453)
T PRK06943        385 AFDVALDG----DAARTFSRRFFEAALERELLL-RPI---G-TTVYLMPP-YVLDDDEIAWLAERTRATLDATLAE  450 (453)
T ss_pred             EEEEccCC----CcchHHHHHHHHHHHHCCcEE-Eec---C-CEEEEeCC-CcCCHHHHHHHHHHHHHHHHHHHHh
Confidence            34443211    001234677888888999654 221   2 35899863 6689999999999999998887543

>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type

Probab=99.28  E-value=1.9e-08  Score=103.44  Aligned_cols=309  Identities=10%  Similarity=0.025  Sum_probs=165.7

Q ss_pred             hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh--------hh----------hccC
Q 010842          126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV--------GA----------ENMH  187 (499)
Q Consensus       126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~--------~~----------~g~~  187 (499)
                      ...++.+.+.+.+++++.-+.+       ..+|++||||||..|+..||.......        ++          .|-+
T Consensus       102 ~~~~la~~l~~~l~~~~p~~~~-------~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~  174 (464)
T TIGR00699       102 PSKDWAKILKEGILKVAPKGQD-------QVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSP  174 (464)
T ss_pred             HHHHHHHHHHHhHHhhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCc
Confidence            3344555544444555531111       248999999999999999986532110        00          0111


Q ss_pred             C-eEEEcCCCCchhHHHHHHHhCCCC--------CCeEEeeCCCC-CCC-----------ccCHHHHHHHHHHHHHcCCc
Q 010842          188 K-LVVYGSDQTHSTFAKVCKLAGVSP--------ANIRALPTSVD-ANF-----------SLSPQLLRRAVEADVEAGLV  246 (499)
Q Consensus       188 ~-~~i~~s~~~H~s~~ka~~~~G~g~--------~~v~~v~~~~~-~~~-----------~~d~~~L~~~i~~~~~~g~~  246 (499)
                      + .+|......|-...-+....|-..        ..+..+|.... ..+           .-+++.|++.+++   .+..
T Consensus       175 r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~---~~~~  251 (464)
T TIGR00699       175 DLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKK---WHKP  251 (464)
T ss_pred             CCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHh---cCCc
Confidence            2 244444555766555555444210        11223333210 000           0135566676653   2233


Q ss_pred             cEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCC-CCceeEecccccccCCCc
Q 010842          247 PLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE-RVDSFSFSPHKWLLSYLD  321 (499)
Q Consensus       247 p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-~aDsi~~~~hK~l~~p~~  321 (499)
                      +.+|++--.....|.+-|    +++|.++|++||+.+++|.++.|+.....-+.....|+. +.|.+++  -|.++.   
T Consensus       252 iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~--gK~lg~---  326 (464)
T TIGR00699       252 VAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTF--SKKFQT---  326 (464)
T ss_pred             EEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEe--hhhhcc---
Confidence            556666665666688877    999999999999999999998765332221122233554 5888877  576631   


Q ss_pred             ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHH
Q 010842          322 CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKM  398 (499)
Q Consensus       322 ~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~  398 (499)
                      .|++..++      .+.....+..                 ..+-....+...   ++|..+-.+   +..++..++.++
T Consensus       327 gG~~~~~~------~~~~~~~~~~-----------------~~T~~gnp~~~aaa~a~L~~l~~~---~l~~~~~~~g~~  380 (464)
T TIGR00699       327 AGYFFHDP------AFRPNKPYRQ-----------------FNTWMGDPSRALILREIIQEIKRK---DLLENVAHVGDY  380 (464)
T ss_pred             CCccccch------hccCCCCccc-----------------ccCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHH
Confidence            23332221      1110000000                 011112233333   344444333   344555566666


Q ss_pred             HHHHHhc----CCC-eEEEc-CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCC
Q 010842          399 FEGFVKS----DPR-FEIVV-PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGAS  472 (499)
Q Consensus       399 l~~~L~~----~~~-~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~  472 (499)
                      |.+.|++    .|. +.-+. .....++.+.+..         ......+.+.+.++|.+. ...   +...+|+... .
T Consensus       381 l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~---------~~~~~~i~~~~~~~Gvl~-~~~---g~~~ir~~Pp-l  446 (464)
T TIGR00699       381 LYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPD---------EAKRDKLLKKARNNGVNI-GGC---GVKAIRLRPM-L  446 (464)
T ss_pred             HHHHHHHHHHhCCCceeeecccCeEEEEEEecCC---------HHHHHHHHHHHHHCCcEE-ecC---CCCeEEEeCC-C
Confidence            6666654    332 22121 1344455555532         233567888888999654 221   4467999984 7


Q ss_pred             CCcHHHHHHHHHHHHHH
Q 010842          473 LTDERHVVAAWELIMEG  489 (499)
Q Consensus       473 ~~t~~di~~l~~~l~~~  489 (499)
                      .+|++||+.++++|.++
T Consensus       447 ~it~~eid~~~~~l~~~  463 (464)
T TIGR00699       447 VFQKHHADIFLEIISKI  463 (464)
T ss_pred             CCCHHHHHHHHHHHHHh
Confidence            88999999999999875

Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.

>PRK06082 4-aminobutyrate aminotransferase; Provisional

Probab=99.28  E-value=4.6e-08  Score=101.15  Aligned_cols=314  Identities=13%  Similarity=0.074  Sum_probs=174.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      ++.+.++.+.|+++++...+       ...|++|||+|+..|+..||...       | ++.+|.....-|-...-++.+
T Consensus       112 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~a~s~  176 (459)
T PRK06082        112 NETAIECAEKLTEIAGGELN-------RVLFAPGGTSAIGMALKLARHIT-------G-NFKVVSLWDSFHGASLDAISV  176 (459)
T ss_pred             CHHHHHHHHHHHHhCCCCCC-------EEEECCCcHHHHHHHHHHHHHhc-------C-CCEEEEEeCCCcCccHHHHhh
Confidence            44555666668888753222       24899999999999999998652       1 222344455556655444444


Q ss_pred             hCC-------C--CCCeEEeeCCCCCCCc-----c------CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---
Q 010842          208 AGV-------S--PANIRALPTSVDANFS-----L------SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---  264 (499)
Q Consensus       208 ~G~-------g--~~~v~~v~~~~~~~~~-----~------d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---  264 (499)
                      .|-       +  ...+..+|...  .++     .      +++.|++.++.   .+ .+.+|++--.....+.+.|   
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~i~~---~~-~vAavIvEPv~g~g~~~~~~~y  250 (459)
T PRK06082        177 GGEACFRQGMGPLMAGVERIPPAV--SYRGAFPDADGSDVHYADYLEYVIEK---EG-GIGAFIAEAVRNTDVQVPSKAY  250 (459)
T ss_pred             cCCcccccCCCCCCCCCEEeCCCc--ccccccCChhHHHHHHHHHHHHHHhc---CC-CEEEEEECCccCCCCcCCCHHH
Confidence            332       0  01234444321  011     1      13456666642   12 3444444433333233444   


Q ss_pred             hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCccC
Q 010842          265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDPEY  343 (499)
Q Consensus       265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~~y  343 (499)
                      +++|.++|++||+.+++|.++.|+.....-+.....|+ ..|.+++  -|.++..+ ..|.++.++.  +...+..  .+
T Consensus       251 l~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv-~PDiv~~--gKgl~gG~~P~~av~~~~~--i~~~~~~--~~  323 (459)
T PRK06082        251 WKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI-EPDILCI--GKGLGGGLVPIAAMITKDK--YNTAAQI--SL  323 (459)
T ss_pred             HHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC-CCCEEEe--cccccCCCCcceEEEEcHH--HHhhccC--CC
Confidence            89999999999999999999887533221112222355 3888884  78887653 6788887764  2122110  00


Q ss_pred             CCCCCCCCCCcccCCCcccCCCCCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC--CCc
Q 010842          344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP--RHF  417 (499)
Q Consensus       344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~--~~~  417 (499)
                      .                 . .+.....+.+.   +++..+..+   +.+++..++.++|.+.|+++. ...++..  -..
T Consensus       324 ~-----------------~-~T~~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~G  382 (459)
T PRK06082        324 G-----------------H-YTHEKSPLGCAAALATIEVIEQE---GLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIG  382 (459)
T ss_pred             C-----------------C-CCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeecc
Confidence            0                 0 11122334333   344444322   456677777888887776531 1212211  122


Q ss_pred             eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842          418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~  496 (499)
                      .++.+.+..+.. ...........+...+.++|.++. +.   +..++|++.. ...|++||+++++++.++..++.++
T Consensus       383 l~~~ve~~~~~~-~~~~~~~~~~~~~~~~~~~Gvl~~-~~---~~~~i~~~Pp-l~it~~eid~~~~~l~~~l~~~~~~  455 (459)
T PRK06082        383 LLWGVELVTDRH-TKERAYDEAEAVLYRCLNNGLSFK-VS---QGNVIQLSPP-LIITREELTQALAILEEAIAKICQD  455 (459)
T ss_pred             ceeEEEEccCcc-ccCccHHHHHHHHHHHHhCCCEEE-ec---CCCEEEEeCC-CccCHHHHHHHHHHHHHHHHHHhhh
Confidence            334444432110 001112345677888888996543 21   2356999873 5679999999999999999887554

>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.27  E-value=1.4e-08  Score=105.04  Aligned_cols=302  Identities=12%  Similarity=0.062  Sum_probs=164.5

Q ss_pred             EEc-CChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCC-------C--CCCeEEeeCCCCCC-
Q 010842          157 VIQ-NTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGV-------S--PANIRALPTSVDAN-  225 (499)
Q Consensus       157 ~~t-~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~-------g--~~~v~~v~~~~~~~-  225 (499)
                      +|+ ++||||+..|+..||...       | ++.+|......|-...-++.+.|-       +  ...+..+|...... 
T Consensus       130 ~f~~~SGSEAve~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~  201 (464)
T PRK06938        130 QFCGPTGTDAVEAALKLVKTAT-------G-RSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRC  201 (464)
T ss_pred             EEeCCCcHHHHHHHHHHHHHhh-------C-CCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccc
Confidence            454 799999999999998652       1 233444444556554444443321       0  11345565432110 


Q ss_pred             -C--------ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccC
Q 010842          226 -F--------SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACIC  292 (499)
Q Consensus       226 -~--------~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~  292 (499)
                       +        ..+.+.+++.+++.......+.+|++--....-|.+-|    ++++.++|++||+.+++|.++.|+....
T Consensus       202 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG  281 (464)
T PRK06938        202 PFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTG  281 (464)
T ss_pred             cccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc
Confidence             0        02367788877542211123455555544444466533    7999999999999999999987764322


Q ss_pred             ccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHH
Q 010842          293 PEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLR  372 (499)
Q Consensus       293 ~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~  372 (499)
                      .-+.....|+. .|.+++  -|.++..+..|.++.++.  + ..+.  +...                  ..+-....+.
T Consensus       282 ~~~a~e~~gv~-PDiv~~--gKglggG~PlsAv~~~~~--~-~~~~--~~~~------------------~~T~~gnpla  335 (464)
T PRK06938        282 KMFAFEHAGII-PDVVVL--SKAIGGSLPLAVVVYREW--L-DTWQ--PGAH------------------AGTFRGNQMA  335 (464)
T ss_pred             HHHHHHhcCCC-CCEEEe--eccccCCCceEEEeehhH--h-hccC--CCCC------------------CCCCCcCHHH
Confidence            21222223453 799988  577766677888888753  2 2221  1110                  0111123344


Q ss_pred             HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcC--CCceEEEEEecCCCCCC----cch-hHHHHHHHHH
Q 010842          373 LWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVP--RHFALVCFRLNPYPHSG----SAD-TEMLNRKLLD  444 (499)
Q Consensus       373 ~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~--~~~~~v~f~~~~~~~~~----~~~-~~~~~~~l~~  444 (499)
                      ..+++..+..-.-++..++..++.++|.+.|+++. ...++..  -...++.+.+.......    ... .......+..
T Consensus       336 ~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (464)
T PRK06938        336 MAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQR  415 (464)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHH
Confidence            44444433211112355666666777777766531 1111211  12233444443211000    000 1234567788


Q ss_pred             HHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          445 WVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       445 ~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      .+.++|.++. +... ...++|+... ...|++||+++++++.++..++..
T Consensus       416 ~~~~~Gll~~-~~g~-~~~~l~~~Pp-l~it~~eid~~~~~l~~~l~~~~~  463 (464)
T PRK06938        416 ECLRRGLILE-LGGR-HGSVVRFLPP-LIITAEQIDEVAEIFAEAVAAAVA  463 (464)
T ss_pred             HHHHCCeEEe-ecCC-CCCEEEEECC-CccCHHHHHHHHHHHHHHHHHHhc
Confidence            8888996442 2211 1256999874 778999999999999999887653

>PRK07483 hypothetical protein; Provisional

Probab=99.27  E-value=2.5e-08  Score=102.65  Aligned_cols=331  Identities=11%  Similarity=0.053  Sum_probs=173.5

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEc-CCCCchhHHHHHHH
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYG-SDQTHSTFAKVCKL  207 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~-s~~~H~s~~ka~~~  207 (499)
                      ....++.+.|++++.-..+       ...|+++||+|+-.|+..||...... +.  ..+..|+. ....|-...-+..+
T Consensus        73 ~~~~~lae~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~~~~~-g~--~~r~~Ii~~~~~YHG~t~~a~s~  142 (443)
T PRK07483         73 EPAEALADRLVAAAPAGLE-------HVYFVSGGSEAVEAALKLARQYFVEI-GQ--PQRRHFIARRQSYHGNTLGALAI  142 (443)
T ss_pred             HHHHHHHHHHHHhCCCCCC-------EEEEcCCcHHHHHHHHHHHHHHHHhc-CC--CCCcEEEEECCCcCCcCHHHhhh
Confidence            3444555667777632111       24899999999999999998753211 11  12333443 44456554433333


Q ss_pred             hCC---------CCCCeEEeeCCCCCCCcc-------------CHHHHHHHHHHHHHcCCccEEEEEecCCC-cccccCC
Q 010842          208 AGV---------SPANIRALPTSVDANFSL-------------SPQLLRRAVEADVEAGLVPLFLCATVGTT-STTAVDN  264 (499)
Q Consensus       208 ~G~---------g~~~v~~v~~~~~~~~~~-------------d~~~L~~~i~~~~~~g~~p~~vv~t~gtt-~~G~id~  264 (499)
                      .|-         +...+..+|...  .|+-             .+++|++.+...  ....+.+|++--... .-|.+-|
T Consensus       143 s~~~~~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvivEPiqg~~gG~~~~  218 (443)
T PRK07483        143 GGNAWRREPFAPLLIEAHHVSPCY--AYREQRAGESDEAYGQRLADELEAKILEL--GPDTVAAFVAETVVGATAGAVPP  218 (443)
T ss_pred             cCCcccccccCCCCCCCEEeCCCc--cccccccCCCHHHHHHHHHHHHHHHHHhc--CCCceEEEEEeCcccCcCCeEeC
Confidence            221         111234444321  0111             024566555421  112333444433222 2355544


Q ss_pred             ----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcC
Q 010842          265 ----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALST  339 (499)
Q Consensus       265 ----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~  339 (499)
                          +++|.++|++||+.+++|.++.|+.....-+.....++. .|.+++  -|.++..+ ..|.++++++  +.+.+..
T Consensus       219 ~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~-PDiv~~--gK~l~gG~~Pi~av~~~~~--i~~~~~~  293 (443)
T PRK07483        219 VPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVA-PDLVTI--AKGLGAGYQPIGAVLASDR--IYDAIAD  293 (443)
T ss_pred             CHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCC-CCeeee--hhhhccCccccEEEEEcHH--HHHHHhc
Confidence                899999999999999999998776432222222223443 788888  58876654 6888888764  2233322


Q ss_pred             CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEcC--CC
Q 010842          340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD-PRFEIVVP--RH  416 (499)
Q Consensus       340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~~~~~--~~  416 (499)
                      .+..+...                .+.....+.+.+++..+..-.-++.+++..++.++|.+.|+++ ....++.+  -.
T Consensus       294 ~~~~~~h~----------------~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~  357 (443)
T PRK07483        294 GSGFFQHG----------------HTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERLGQHPHVGDIRGR  357 (443)
T ss_pred             CCCccccC----------------CCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeec
Confidence            11111110                1112234444444444321111245666677777777777542 12222211  11


Q ss_pred             ceEEEEEecCCC-CCCc-chhHHHHHHHHHHHHhcCCEEEEee-eECC--EEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          417 FALVCFRLNPYP-HSGS-ADTEMLNRKLLDWVNSTGRVYLTHT-IVGG--LYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       417 ~~~v~f~~~~~~-~~~~-~~~~~~~~~l~~~l~~~g~~~~~~~-~~~g--~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      ..++.+.+.... .... .........+.+.+.++|.++.... ...+  ...+|+... ...|++|||+++++|.+...
T Consensus       358 Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~Pp-L~it~~eid~~~~~l~~~l~  436 (443)
T PRK07483        358 GLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPP-FIITAAQIDEIVERLGDAID  436 (443)
T ss_pred             ccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHH
Confidence            223334432211 0000 0012345678888899996543221 1111  246999884 77899999999999999988


Q ss_pred             HHhc
Q 010842          492 RLFK  495 (499)
Q Consensus       492 ~l~~  495 (499)
                      ++..
T Consensus       437 ~~~~  440 (443)
T PRK07483        437 AALA  440 (443)
T ss_pred             HHHh
Confidence            7654

>PRK07046 aminotransferase; Validated

Probab=99.26  E-value=3.5e-08  Score=101.78  Aligned_cols=309  Identities=17%  Similarity=0.096  Sum_probs=166.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      +..|.++.+.++++++++.         ..|+++||||+..|+..||...       | ++.+|-....-|-........
T Consensus       114 ~~~~~~lAe~l~~~~~~~~---------v~F~nSGtEA~e~AlrlAR~~T-------G-r~~ii~~~g~YHG~~d~~l~~  176 (453)
T PRK07046        114 SEDAAWVGEELARRFGLPY---------WQVATTATDANRFVLRWARAVT-------G-RPKILVFNGCYHGTVDDVFVD  176 (453)
T ss_pred             CHHHHHHHHHHHHHhCCCE---------EEEECCHHHHHHHHHHHHHHhh-------C-CCEEEEECCCCCCCcHHhHhh
Confidence            5667777788888886433         3899999999999999999763       1 222333344445442222111


Q ss_pred             h------------CCCC---CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHH
Q 010842          208 A------------GVSP---ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPL  268 (499)
Q Consensus       208 ~------------G~g~---~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I  268 (499)
                      .            |...   ..+..+|.       -|++.|++.+..     ..+.+|++--.....|.+-|    ++++
T Consensus       177 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------nd~~~l~~~l~~-----~~vAavi~EPi~g~~G~~~p~~~fl~~l  244 (453)
T PRK07046        177 LVDGRPVQRPGLLGQVHDLTATTRVVEF-------NDLAALEAALAD-----GDVAAVLAEPAMTNIGMVLPEPGFHEAL  244 (453)
T ss_pred             ccCCCCCCCCCCCCCCccccCceEeeCC-------CCHHHHHHHhCC-----CCeEEEEECCCCCCCCCcCCCHHHHHHH
Confidence            1            1100   01122221       278999988842     23445555544445566644    7999


Q ss_pred             HHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC-ccCCCCC
Q 010842          269 AEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD-PEYLKNK  347 (499)
Q Consensus       269 ~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~-~~yl~~~  347 (499)
                      .++|++||+.+++|.++. +-.-.... ....++. .|.+++  -|.++..+.+|++..+++- . +.+... ...... 
T Consensus       245 r~lc~~~g~llI~DEV~t-fr~g~Gg~-~~~~gv~-PDi~t~--gK~lggG~Pi~av~g~~~i-~-~~~~~~~~~~~~~-  316 (453)
T PRK07046        245 RELTRRYGTLLVIDETHT-ISSGPGGY-TRAHGLE-PDFLVV--GKPIAGGVPCAVYGFSAEL-A-ERAQAAKASAPPG-  316 (453)
T ss_pred             HHHHHHhCCEEEEEcccc-CccCCcch-hHHhCCC-ccceee--hhhhcCCCcceeeeehHHH-H-HHHhhccccCCCC-
Confidence            999999999999999874 10000011 1122553 788876  6888766789988887642 2 333210 000000 


Q ss_pred             CCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEEcCCCceEEEE
Q 010842          348 PSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPR-FEIVVPRHFALVCF  422 (499)
Q Consensus       348 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~-~~~~~~~~~~~v~f  422 (499)
                                 ......+-....+.+.+++..+..-.-++..++..++.++|.+.|++    .+- +.+.....  .+.+
T Consensus       317 -----------~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G~--~~~i  383 (453)
T PRK07046        317 -----------HSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIARHGLPWHVTRVGA--RVEF  383 (453)
T ss_pred             -----------CceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCc--EEEE
Confidence                       00111122223444444444332111123455556666666666653    321 12222222  2334


Q ss_pred             EecCCCCCCcch-----hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          423 RLNPYPHSGSAD-----TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       423 ~~~~~~~~~~~~-----~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      .+.+.......+     .......+...+.++|..+ .+.   + ..++++.   .+|++||+++++++.++.+++.
T Consensus       384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~-~~~---~-~~~~~~p---~~t~~did~~~~~~~~~l~~~~  452 (453)
T PRK07046        384 QFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLI-TPF---H-NMMLVCP---ATTAADVDRLVAAFDACLGELL  452 (453)
T ss_pred             EEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEE-ecc---c-CcEEEeC---CCCHHHHHHHHHHHHHHHHHHh
Confidence            332211000000     1234566778888899644 321   1 3466654   3899999999999999988764

>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.24  E-value=4.4e-08  Score=101.43  Aligned_cols=328  Identities=14%  Similarity=0.044  Sum_probs=177.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      ++...++.+.|++++.-+.+       ...|+++||+|+..|+..||...... +..+ ++.+|.....-|-...-+..+
T Consensus        89 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGsEAve~AlKlAr~~~~~~-g~t~-r~~ii~~~~~yHG~t~ga~s~  159 (466)
T PRK07030         89 HEPVIELSERLVKITPPGLS-------RCFYADNGSSAIEVALKMSFHYWRNR-GKPR-KKRFVTLTNSYHGETLAAMSV  159 (466)
T ss_pred             CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHHh-CCCC-CcEEEEECCCcCcccHHHHhc
Confidence            44555566678887632111       34899999999999999998753211 0001 122344455556555444444


Q ss_pred             hCCCC---------CCeEEeeCCCCC--CCc--------cCHHHHHHHHHHHHHcCCccEEEEEec-CCCcccccCC---
Q 010842          208 AGVSP---------ANIRALPTSVDA--NFS--------LSPQLLRRAVEADVEAGLVPLFLCATV-GTTSTTAVDN---  264 (499)
Q Consensus       208 ~G~g~---------~~v~~v~~~~~~--~~~--------~d~~~L~~~i~~~~~~g~~p~~vv~t~-gtt~~G~id~---  264 (499)
                      .|...         ..+..+|....-  .+.        -+++.+++.+..   .+..+.+|++.- .....|.+-|   
T Consensus       160 ~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~---~~~~iAAvi~EP~iqg~gG~~~~~~~  236 (466)
T PRK07030        160 GDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAE---HHDEIAAVIVEPLIQGAGGMRMYHPV  236 (466)
T ss_pred             cCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEecccccCCCcccCCHH
Confidence            33210         123444432100  000        124556766652   233455555554 2344466532   


Q ss_pred             -hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCcc
Q 010842          265 -VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDPE  342 (499)
Q Consensus       265 -l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~~  342 (499)
                       +++|.++|++||+.+++|.++.|+.....-+.....++. .|.+++  -|.++..+ ..|.++++++-  .+.+.....
T Consensus       237 yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv~-PDiv~~--gKgl~gG~~Pi~av~~~~ei--~~~~~~~~~  311 (466)
T PRK07030        237 YLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGIR-PDFLCL--SKALTGGYLPLAAVLTTDTV--YQAFYDDYP  311 (466)
T ss_pred             HHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCCC-CCEEee--ehhccCCcccceEEEecHHH--HHHHhcccc
Confidence             799999999999999999998776433222222233553 899998  58776663 67888877642  233321100


Q ss_pred             CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCc
Q 010842          343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHF  417 (499)
Q Consensus       343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~  417 (499)
                      -.  .        .+   ....+.....+.+.+   +|+.+-.+   +.+++..++.++|.+.|+++.....+..  -..
T Consensus       312 ~~--~--------~~---~h~~T~~gnpla~aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~G  375 (466)
T PRK07030        312 TL--R--------AF---LHSHSYTGNPLACAAALATLDIFEQD---NVIENNRALARRMAEATAHLADHPHVAEVRQTG  375 (466)
T ss_pred             cc--c--------cc---ccCCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCEEEeEece
Confidence            00  0        00   001111123344433   44444333   4567777778888777766422211211  122


Q ss_pred             eEEEEEecCCCCC-Cc-chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          418 ALVCFRLNPYPHS-GS-ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       418 ~~v~f~~~~~~~~-~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      .++.+.+...... .. ........++.+++.++|.++ .+.   + ..+|+... ...|++||+.+++.+.+..+++.
T Consensus       376 l~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~-~~~---g-~~i~~~Pp-l~it~~eid~~~~~l~~al~~~~  448 (466)
T PRK07030        376 MILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALL-RPL---G-SVVYFLPP-YVITPEQIDFLAEVASEGIDIAT  448 (466)
T ss_pred             eEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEE-Eec---C-CEEEEECC-ccCCHHHHHHHHHHHHHHHHHHh
Confidence            2344444321100 00 001123457888888999543 321   2 36898873 77899999999999999998874

>PRK08297 L-lysine aminotransferase; Provisional

Probab=99.24  E-value=2.8e-08  Score=102.40  Aligned_cols=296  Identities=13%  Similarity=0.069  Sum_probs=154.7

Q ss_pred             EEEcCChHHHHHHHHHHHHHHHHhHhhhhcc----CCeEEEcCCCCchhHHHHHHHhCCCCC--------CeEEeeCCCC
Q 010842          156 GVIQNTTSDSILVTLIAARDRALDAVGAENM----HKLVVYGSDQTHSTFAKVCKLAGVSPA--------NIRALPTSVD  223 (499)
Q Consensus       156 g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~----~~~~i~~s~~~H~s~~ka~~~~G~g~~--------~v~~v~~~~~  223 (499)
                      ..|++||||||..|+..||..........|.    +..+|-.....|-...-+....|....        ....+|... 
T Consensus       113 v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~-  191 (443)
T PRK08297        113 LFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPK-  191 (443)
T ss_pred             EEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCC-
Confidence            5899999999999999998653110000121    122344444456554444444332000        000111110 


Q ss_pred             CCCc--------------cCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc----CChhHHHHHHHHhCCEEEeeccc
Q 010842          224 ANFS--------------LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----DNVEPLAEVANEYGIWVHVDAAY  285 (499)
Q Consensus       224 ~~~~--------------~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d~l~~I~~ia~~~~~~lhvD~A~  285 (499)
                      -.+.              -+++++++.+..   .+..+.+|++.-.....|.+    +-+++|.++|++||+.+++|+++
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~  268 (443)
T PRK08297        192 LRFPLPGEDLEEVEALEAEALAQARAAFER---HPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQ  268 (443)
T ss_pred             CCCCCcccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechh
Confidence            0000              023445555543   23456666666555555665    56899999999999999999999


Q ss_pred             cchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCC
Q 010842          286 AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTG  365 (499)
Q Consensus       286 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s  365 (499)
                      .|+.....-+.....++ ..|.+++  -|.+  |  .|.++++++  +.....   ..+....        .    ...+
T Consensus       269 tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l--~--~~a~l~~~~--i~~~~~---~~~~~~~--------~----~~~T  324 (443)
T PRK08297        269 TGVGLTGTAWAYQQLGV-RPDIVAF--GKKT--Q--VCGIMAGRR--VDEVED---NVFAVSS--------R----INST  324 (443)
T ss_pred             hccCccchHHHHHhcCC-CCCEEEe--cccc--c--ccceecchH--HHHhhh---hhccCcc--------c----cCCC
Confidence            77533211111112344 3788886  5765  3  333444432  111110   0000000        0    0011


Q ss_pred             CCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHH
Q 010842          366 RRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRK  441 (499)
Q Consensus       366 r~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~  441 (499)
                      -....+.+.+++..+..-.-++.+++..++.+++.+.|++    .|.+-.-......++.+.+..         ......
T Consensus       325 ~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~~---------~~~~~~  395 (443)
T PRK08297        325 WGGNLVDMVRARRILEVIEEDGLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLPT---------TADRDE  395 (443)
T ss_pred             CCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEecC---------HHHHHH
Confidence            1123344444444332111124556666777777776654    343210112233455555533         223567


Q ss_pred             HHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          442 LLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       442 l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +.+.+.++|.++. +.   +...+|++.. ..+|++||++++++|.++.+++
T Consensus       396 ~~~~l~~~Gvl~~-~~---~~~~lr~~P~-l~~t~~eid~~l~~l~~~l~~~  442 (443)
T PRK08297        396 VIRRLWEEGVLVL-PC---GERSIRFRPA-LTVTTEEIDAAIDALRRALPEV  442 (443)
T ss_pred             HHHHHHHCCEEEe-cC---CCCeEEEECC-ccCCHHHHHHHHHHHHHHHHhh
Confidence            8888888895542 21   3356899874 7789999999999999988765

>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated

Probab=99.24  E-value=1.8e-08  Score=103.07  Aligned_cols=313  Identities=9%  Similarity=-0.021  Sum_probs=167.2

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCe-EEEcCCCCchhHHHHHHH
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKL-VVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~-~i~~s~~~H~s~~ka~~~  207 (499)
                      +...++.+.|+++++-+.+       ...++++||||+..|+..||......    |.++. +|......|-...-+..+
T Consensus        86 ~~~~~la~~L~~~~p~~~~-------~v~f~~SGsEAve~AlklAr~~~~~~----g~~r~kii~~~~~yHG~t~~a~s~  154 (428)
T PRK07986         86 PPAIELCRKLVAMTPQPLE-------CVFLADSGSVAVEVAMKMALQYWQAK----GEPRQRFLTLRHGYHGDTFGAMSV  154 (428)
T ss_pred             HHHHHHHHHHHhhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhc----CCCCcEEEEECCCcCCCcHhhhcc
Confidence            4455566668887643212       24899999999999999998753111    11222 344444456543333332


Q ss_pred             hCC--------C--CCCeEEeeCCCCC---CC-ccCHHHHHHHHHHHHHcCCccEEEEEecC-CCccccc----CChhHH
Q 010842          208 AGV--------S--PANIRALPTSVDA---NF-SLSPQLLRRAVEADVEAGLVPLFLCATVG-TTSTTAV----DNVEPL  268 (499)
Q Consensus       208 ~G~--------g--~~~v~~v~~~~~~---~~-~~d~~~L~~~i~~~~~~g~~p~~vv~t~g-tt~~G~i----d~l~~I  268 (499)
                      .|-        +  ...+..+|.....   .+ .-|+++|++.++.   .+....+|++--. ....|.+    +.+++|
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~---~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l  231 (428)
T PRK07986        155 CDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAA---HRHEIAAVILEPIVQGAGGMRIYHPEWLKRV  231 (428)
T ss_pred             cCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHh---CCCcEEEEEEechhcCcCCcccCCHHHHHHH
Confidence            221        0  0123344432110   01 2366778877753   2223334444332 3333443    349999


Q ss_pred             HHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCc-cCCCC
Q 010842          269 AEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDP-EYLKN  346 (499)
Q Consensus       269 ~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~-~yl~~  346 (499)
                      .++|++||+++++|.++.|+.....-+.....++ ..|.+++  -|.++.. ..+|.++.+++  +.+.+.... ..+..
T Consensus       232 ~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~~--i~~~~~~~~~~~~~~  306 (428)
T PRK07986        232 RKLCDREGILLIADEIATGFGRTGKLFACEHAGI-APDILCL--GKALTGGTMTLSATLTTRE--VAETISNGEAGCFMH  306 (428)
T ss_pred             HHHHHHcCCEEEEeccccCCccCCCeeeecccCC-CCCEEEe--chhhhCCcccCcchhchHH--HHHHhhcCCCCcccc
Confidence            9999999999999999866422111111112344 2688874  6887655 35666666643  223332211 00000


Q ss_pred             CCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCceEEEEEe
Q 010842          347 KPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFALVCFRL  424 (499)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v~f~~  424 (499)
                      .            .+. .+.+..+....++|+.+-.+   +..++..++.++|.+.|+++.....+.+  -...++.+.+
T Consensus       307 ~------------~T~-~g~p~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~  370 (428)
T PRK07986        307 G------------PTF-MGNPLACAVANASLSLLESG---DWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVET  370 (428)
T ss_pred             C------------CCC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEe
Confidence            0            001 12222233444455555333   3466777778888887776422222211  1122344444


Q ss_pred             cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      ....         ....+.+.+.++|..+ .+.   | ..+|++.. ...|++||++++++|.++.+
T Consensus       371 ~~~~---------~~~~~~~~l~~~Gl~~-~~~---g-~~i~~~Pp-l~it~~ei~~~~~~l~~~l~  422 (428)
T PRK07986        371 TRPV---------NMAALQRFFVEQGVWI-RPF---G-KLIYLMPP-YIILPEQLQRLTAAVNRAVQ  422 (428)
T ss_pred             CCcc---------cHHHHHHHHHHCCcEE-Eec---C-CEEEEeCC-CCCCHHHHHHHHHHHHHHHh
Confidence            3211         1356778888889644 221   3 46999874 67899999999999988754

>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional

Probab=99.23  E-value=8.6e-08  Score=99.14  Aligned_cols=322  Identities=14%  Similarity=0.070  Sum_probs=171.9

Q ss_pred             HHHHHHHHHHHHHHcCCCC-ccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEE-cCCCCchhHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPK-TFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVY-GSDQTHSTFAKVC  205 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~-~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~-~s~~~H~s~~ka~  205 (499)
                      +..+.++.+.|++++.... ..     .-.++++|||||+..|+..||...         .+..|+ .....|-...-+.
T Consensus       100 ~~~~~~lAe~L~~~~p~~~~~~-----~~~f~~~SGsEAve~AlklAr~~t---------gr~~Ii~~~~~yHG~t~~al  165 (459)
T PRK06931        100 TPLKDAFSEYLLSLLPGQGKEY-----CLQFTGPSGADAVEAAIKLAKTYT---------GRSNVISFSGGYHGMTHGAL  165 (459)
T ss_pred             CHHHHHHHHHHHHhCCCccccc-----eEEEeCCCcHHHHHHHHHHHHHhc---------CCCeEEEECCCcCCccHHHH
Confidence            4555566677888774321 10     012445899999999999998753         222343 3444455444444


Q ss_pred             HHhCCC---------CCCeEEeeCCCCCCCc--------cCHHHHHHHHHHHHH----cCCccEEEEEecCCCcccccCC
Q 010842          206 KLAGVS---------PANIRALPTSVDANFS--------LSPQLLRRAVEADVE----AGLVPLFLCATVGTTSTTAVDN  264 (499)
Q Consensus       206 ~~~G~g---------~~~v~~v~~~~~~~~~--------~d~~~L~~~i~~~~~----~g~~p~~vv~t~gtt~~G~id~  264 (499)
                      .+.|-.         ...+..+|...  .++        -+.+.+++.+++...    ....+.+|++--.....|.+-|
T Consensus       166 s~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~  243 (459)
T PRK06931        166 AVTGNLSPKNAVNGLMPGVQFMPYPH--EYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPA  243 (459)
T ss_pred             hhcCCcccccCCCCCCCCcEEeCCCc--cccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCC
Confidence            333210         11345555432  111        134555544444332    1233455555444444465533


Q ss_pred             ----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC
Q 010842          265 ----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD  340 (499)
Q Consensus       265 ----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~  340 (499)
                          ++++.++|++||+.+++|.++.|+.....-+.....++ ..|.+++  -|.++..+..|++..++.  + +.+.  
T Consensus       244 ~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv-~PDivt~--gK~l~gG~Pi~av~~~~~--~-~~~~--  315 (459)
T PRK06931        244 PVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGI-EPDIIVM--SKAVGGGLPLAVLGIKKE--F-DAWQ--  315 (459)
T ss_pred             CHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCC-CCCEEEe--cccccCCcceeeeeeHHH--H-hhcc--
Confidence                89999999999999999999877643322222222344 3898888  577765566777776642  2 2221  


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCC
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRH  416 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~  416 (499)
                      +....+              |. .+.+..+....++|..+..++   ..++..++.++|.+.|++    .|.+.-+ .-.
T Consensus       316 ~~~~~~--------------T~-~gnpla~aaala~L~~l~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~i~~v-rG~  376 (459)
T PRK06931        316 PGGHTG--------------TF-RGNQLAMATGLTTLKILKEEN---LAQNAAERGEWLKAQLAELQKRYPCIGNV-RGR  376 (459)
T ss_pred             CCCCCC--------------CC-CCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHhCCCeEeE-ecC
Confidence            110000              11 122222223334444443333   445566666666666654    3321111 112


Q ss_pred             ceEEEEEecCCCCCC----cch-hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          417 FALVCFRLNPYPHSG----SAD-TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       417 ~~~v~f~~~~~~~~~----~~~-~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      ..++.+.+.......    ... .......+...+.++|.++. +... ...++|+... ...|++||+++++++.++..
T Consensus       377 Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~-~~~~-~~~~l~~~Pp-l~it~~eid~~~~~l~~~l~  453 (459)
T PRK06931        377 GLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLE-RGGR-NGNVVRLLPP-LLITQAECEEFIDRFEQALL  453 (459)
T ss_pred             ceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEe-ecCC-CCCEEEEECC-CCcCHHHHHHHHHHHHHHHH
Confidence            233444443211000    000 12345677888888996542 2211 1356998884 77899999999999999988


Q ss_pred             HHhc
Q 010842          492 RLFK  495 (499)
Q Consensus       492 ~l~~  495 (499)
                      ++.+
T Consensus       454 ~~~~  457 (459)
T PRK06931        454 AAVK  457 (459)
T ss_pred             HHHh
Confidence            7765

>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.23  E-value=9.7e-08  Score=98.85  Aligned_cols=332  Identities=10%  Similarity=0.049  Sum_probs=175.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      +..+.++.+.|++++....+       ...|+++||+|+..|+..||...... +..| ++.+|.....-|-...-+..+
T Consensus        98 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseAve~AlklAr~~~~~~-g~tg-r~~ii~~~~~YHG~t~~als~  168 (460)
T PRK06916         98 NVPSILLAEKLIEVVPEGLK-------KVFYSDSGATAVEIAIKMAFQYWQNK-GKPK-KQRFVTLKNAYHGDTIGAVSV  168 (460)
T ss_pred             CHHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCcCCcccHHhHhc
Confidence            34445566668887743211       24899999999999999998753211 1011 122344455556655444444


Q ss_pred             hCCC---------CCCeEEeeCCCCC--CCc--------cCHHHHHHHHHHHHHcCCccEEEEEec-CCCccccc----C
Q 010842          208 AGVS---------PANIRALPTSVDA--NFS--------LSPQLLRRAVEADVEAGLVPLFLCATV-GTTSTTAV----D  263 (499)
Q Consensus       208 ~G~g---------~~~v~~v~~~~~~--~~~--------~d~~~L~~~i~~~~~~g~~p~~vv~t~-gtt~~G~i----d  263 (499)
                      .|-.         ...+..+|....-  .+.        -+++.+++.++.   .+..+.+|++-- .....|.+    +
T Consensus       169 s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~  245 (460)
T PRK06916        169 GAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE---KHEEIAAIIVEPLVQGAGGMITMPKG  245 (460)
T ss_pred             cCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcccCCHH
Confidence            3321         0123445432100  001        135566666652   223455555543 23444655    2


Q ss_pred             ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCcc
Q 010842          264 NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDPE  342 (499)
Q Consensus       264 ~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~~  342 (499)
                      =++++.++|++||+.+++|.++.|+.....-+.....++. .|.+++  -|.++..+ ..|.++.+++-  .+.+...  
T Consensus       246 fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~-PDiv~~--gK~l~gG~~Pi~av~~~~ei--~~~~~~~--  318 (460)
T PRK06916        246 YLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVT-PDIMTA--GKGLTGGYLPIAITVTTDEI--YNAFYGD--  318 (460)
T ss_pred             HHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCC-CCeeee--ehhhhcCccccceeeecHHH--HHHhhcc--
Confidence            2799999999999999999998765332222122223443 788876  58776553 67888887642  2222211  


Q ss_pred             CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCceEE
Q 010842          343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFALV  420 (499)
Q Consensus       343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v  420 (499)
                      +....        .+.   ...+.....+.+.+++..+..-.-+...++..++.+++.+.|+++.....+.+  -...++
T Consensus       319 ~~~~~--------~~~---~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~  387 (460)
T PRK06916        319 YEEQK--------TFF---HGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMV  387 (460)
T ss_pred             ccccC--------ccc---cCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCcee
Confidence            10000        000   01111123444444444332111123567777888888888876532221211  111223


Q ss_pred             EEEecCCCCC-Ccch-hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          421 CFRLNPYPHS-GSAD-TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       421 ~f~~~~~~~~-~~~~-~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      .+.+..+... +... ......++...+.++|.++ .+.   + ..+|+.. ...+|++||+++++++.+..+++..
T Consensus       388 giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~-~~~---g-~~l~~~P-pl~it~~~id~~~~~l~~~l~~~~~  458 (460)
T PRK06916        388 GIELVKNKETKEPFEWTERVGVQVCKRSRELGMLT-RPL---G-NTIVFMP-PLASTIDELDEMLRILYKAISDVTE  458 (460)
T ss_pred             eEEeecccccccCCCchhhHHHHHHHHHHHCCeEE-Eec---C-CEEEEeC-CcccCHHHHHHHHHHHHHHHHhhcc
Confidence            3333221100 0000 1123457888888899544 221   2 4688887 3778999999999999999887654

>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.21  E-value=7.1e-08  Score=99.87  Aligned_cols=327  Identities=13%  Similarity=0.056  Sum_probs=172.0

Q ss_pred             HHHHHHHHHHHHHcCCCC---ccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH
Q 010842          129 ELEIVVMDWLATMLKLPK---TFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC  205 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~---~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~  205 (499)
                      ....++.+.|++++.-..   ..     ....|+++||+||-.|+..||...... +..+ ++.+|......|-...-+.
T Consensus       107 ~~~~~lae~L~~~~p~~~~~~~~-----~~v~f~~sGSEAvE~AlKlAr~~~~~~-g~~~-r~~ii~~~~syHG~t~gal  179 (472)
T PRK08742        107 EPAVQLAEQLLAIAPRQDGRAPL-----SKVFYADNGSAGVEVALKMAFHYFHNR-GEHR-RTRFIALENGYHGETIGAL  179 (472)
T ss_pred             HHHHHHHHHHHHhCCCcccCCCC-----CEEEEeCCchHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCCchhhh
Confidence            344556666877764210   00     135899999999999999999764221 1011 2233444545565544443


Q ss_pred             HHhCCC---------CCCeEEeeCCCCCCCcc------------CHHHHHHHHHHHHHcCCccEEEEEec-CCCccccc-
Q 010842          206 KLAGVS---------PANIRALPTSVDANFSL------------SPQLLRRAVEADVEAGLVPLFLCATV-GTTSTTAV-  262 (499)
Q Consensus       206 ~~~G~g---------~~~v~~v~~~~~~~~~~------------d~~~L~~~i~~~~~~g~~p~~vv~t~-gtt~~G~i-  262 (499)
                      ...|..         ...+..+|....  ++.            +++.+++.++.   .+..+.+|++-- .....|.+ 
T Consensus       180 s~~~~~~~~~~~~p~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~iAAvI~EPviqg~gG~~~  254 (472)
T PRK08742        180 AVGDIPLYRRVYAPLLLESLFAPSPDA--YLAEPGQSAEDYALQAADALQALFEQ---SPGEICALILEPRLQCAGGMRM  254 (472)
T ss_pred             hccCCcccccccCCCCCCCEEeCCCCc--cccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEccccccCCCccc
Confidence            333321         012344544211  111            35666666642   223444555543 23344654 


Q ss_pred             ---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhc
Q 010842          263 ---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALS  338 (499)
Q Consensus       263 ---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~  338 (499)
                         +=++++.++|++||+.+++|.++.|+.....-+.....|+ ..|.+++  -|.++..+ ..|.++++++  +.+.+.
T Consensus       255 ~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv-~PDiv~~--gKgl~gG~~Plaav~~~~e--i~~~~~  329 (472)
T PRK08742        255 HHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV-MPDLLCL--SKGLTGGFLPLSAVLATQQ--LYDAFL  329 (472)
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC-CCCEEEE--cccccCCCCCcceeeccHH--HHHHhh
Confidence               2279999999999999999999877643322222222355 3899988  58876553 5777777654  223332


Q ss_pred             CCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-
Q 010842          339 TDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-  414 (499)
Q Consensus       339 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-  414 (499)
                      ....   ..        .+   ....+.....+...+   +|..+-.++   .+++..++.++|.+.++.+....++.+ 
T Consensus       330 ~~~~---~~--------~~---~h~~T~~gnpl~~Aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~~~~~~~~~~i~dv  392 (472)
T PRK08742        330 DDSR---ER--------AF---LHSHSYTGNPLACAAALATLDIFADDD---VIARNQPTAARMTQLAAQIGEHPHVADV  392 (472)
T ss_pred             ccCc---cC--------cc---CcCCCCCccHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHhcCCCeeeE
Confidence            1100   00        00   001111223344433   444443333   445555556666555544322222211 


Q ss_pred             -CCceEEEEEecCCCCC-Cc-chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          415 -RHFALVCFRLNPYPHS-GS-ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       415 -~~~~~v~f~~~~~~~~-~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                       -....+.+.+..+... +. .........+.+++.++|.++ .+.   | ..+|+... ...|++||++++++|.+..+
T Consensus       393 RG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~-~~~---g-~vi~~~Pp-L~it~~ei~~~~~~l~~~l~  466 (472)
T PRK08742        393 RQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVL-RPL---G-DVLYWMPP-YCVDEAQLALLADTTRHAID  466 (472)
T ss_pred             eccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEE-Eec---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHH
Confidence             1222344444321100 00 001123466778888889554 221   3 46999884 77899999999999999988


Q ss_pred             HHhc
Q 010842          492 RLFK  495 (499)
Q Consensus       492 ~l~~  495 (499)
                      ++..
T Consensus       467 ~~~~  470 (472)
T PRK08742        467 EAVA  470 (472)
T ss_pred             HHhc
Confidence            7653

>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]

Probab=99.20  E-value=6.7e-09  Score=98.42  Aligned_cols=324  Identities=13%  Similarity=0.113  Sum_probs=194.7

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccE-EEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEE---EcCCCC
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGG-VIQNTTSDSILVTLIAARDRALDAVGAENMHKLVV---YGSDQT  197 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g-~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i---~~s~~~  197 (499)
                      ....-..++|.-+.+.-.+.||++++.|     |. +-.-+||-||+..-.+...           |..+|   -.+...
T Consensus        79 GGne~ID~iE~LCq~RALeaF~ldp~kW-----GVNVQp~SGSPANfavYtall~-----------Ph~RiMGLDLP~GG  142 (477)
T KOG2467|consen   79 GGNEYIDQIELLCQKRALEAFGLDPEKW-----GVNVQPYSGSPANFAVYTALLK-----------PHERIMGLDLPSGG  142 (477)
T ss_pred             CcchHHHHHHHHHHHHHHHHhCCCHHHC-----ceeeccCCCCchhhHHHhhhcC-----------CCCeeeeccCCCCC
Confidence            3344667888888888899999987642     22 3445888899866655432           33333   245556


Q ss_pred             chhHHHHH---HHhCCCCCCeE----EeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHH
Q 010842          198 HSTFAKVC---KLAGVSPANIR----ALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAE  270 (499)
Q Consensus       198 H~s~~ka~---~~~G~g~~~v~----~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~  270 (499)
                      |.|.--..   ++...   .+.    ...+|++ ++-||.|.||+.-..     .+|.+|+  +|++...-.-|...+.+
T Consensus       143 HLsHGy~T~~kkISa~---SiyFeSmPYkv~~~-TG~IDYD~Le~~A~~-----frPk~ii--aG~SaY~R~~DYaR~R~  211 (477)
T KOG2467|consen  143 HLSHGYQTPTKKISAT---SIYFESMPYKVDPS-TGYIDYDKLEKTATL-----FRPKLII--AGTSAYSRLIDYARFRK  211 (477)
T ss_pred             ccccccccCCceeeee---eeecccCceeeCCC-CCceehHHHHHHHHh-----cCCcEEE--eccccchhhccHHHHHH
Confidence            65522111   11111   111    1233433 468999999987544     3465544  45566777789999999


Q ss_pred             HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhh-cCCccCCCCCCC
Q 010842          271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL-STDPEYLKNKPS  349 (499)
Q Consensus       271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~-~~~~~yl~~~~~  349 (499)
                      ||.+.|..|.+|-||-.+........   .-++.+|.++...||.|.+|.| |++++|..-.-...- .....|      
T Consensus       212 Iad~~gA~Lm~DMAHISgLVAA~vip---sPFey~DiVTTTTHKsLRGPRg-~mIFyRkGvk~~~~k~g~~i~y------  281 (477)
T KOG2467|consen  212 IADKVGAYLMADMAHISGLVAAGVIP---SPFEYCDIVTTTTHKSLRGPRG-AMIFYRKGVKSIKPKQGKEILY------  281 (477)
T ss_pred             HHHhcCceeehhhhhHHHHHhcccCC---CcccccceeeccccccccCCcc-eeEEEeccCCcCCCCCCCccee------
Confidence            99999999999999855433221111   1256799999999999999964 566666532110000 001111      


Q ss_pred             CCCCcccCCCc-ccCCCCCCCcH-HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecC
Q 010842          350 ESNSVVDFKDW-QVGTGRRFKSL-RLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNP  426 (499)
Q Consensus       350 ~~~~~~~~~~~-~~~~sr~~~al-~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~  426 (499)
                      +.+...++.-+ ++|+|.....+ .+..+|+.-....+.+..++...+++.|.+.|.+. |++++.. .+...+.+.+.+
T Consensus       282 dlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLvDLr~  360 (477)
T KOG2467|consen  282 DLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVLVDLRP  360 (477)
T ss_pred             chhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEEEeccc
Confidence            11122233222 56666665544 56678888888889999999999999999999987 8998853 566677777776


Q ss_pred             CCCCCcchhHHHHHHHHHHH----HhcCCEEEEeeeECCEEEEEEec---cCCCCcHHHHHHHHHHHHHHH
Q 010842          427 YPHSGSADTEMLNRKLLDWV----NSTGRVYLTHTIVGGLYMLRFAV---GASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       427 ~~~~~~~~~~~~~~~l~~~l----~~~g~~~~~~~~~~g~~~lRi~~---~~~~~t~~di~~l~~~l~~~~  490 (499)
                      .+ .+.    ...+++++.+    ++.-  +.+....-..+.+|+..   +.-...++|.+++.+-|.+.+
T Consensus       361 ~G-~dG----arvE~vle~~~I~~NKNt--vpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av  424 (477)
T KOG2467|consen  361 KG-VDG----ARVEKVLELCHIALNKNT--VPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAV  424 (477)
T ss_pred             cC-Cch----HHHHHHHHHhhhhhcCCc--CCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHH
Confidence            54 122    2234444443    1211  11111111224588865   122235688887777775544

>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional

Probab=99.17  E-value=4.8e-08  Score=99.95  Aligned_cols=307  Identities=10%  Similarity=-0.009  Sum_probs=160.7

Q ss_pred             HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCe-EEEcCCCCchhHHHHHHH
Q 010842          130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKL-VVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~-~i~~s~~~H~s~~ka~~~  207 (499)
                      ...++.+.|+++++.+.+       ...|+++||+|+-.|+..||......    |. .+. +|......|-...-+..+
T Consensus        84 ~~~~lae~L~~~~p~~~~-------~v~f~~SGseA~e~AlklAr~~~~~~----g~~~r~~ii~~~~~yHG~t~~als~  152 (422)
T PRK05630         84 PAIKLTRKLLNLTDNGLD-------HVFYSDSGSVSVEVAIKMALQYSKGQ----GHPERTRLLTWRSGYHGDTFAAMSV  152 (422)
T ss_pred             HHHHHHHHHHhhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhc----CCCCCcEEEEECCCcCCccHHHhcc
Confidence            344455667777642211       24899999999999999998753211    11 123 344455556544444333


Q ss_pred             hCC--------C--CCCeEEeeCCCCCCCccCH-------HHHHHHHHHHHHcCCccEEEEEecC-CCccccc----CCh
Q 010842          208 AGV--------S--PANIRALPTSVDANFSLSP-------QLLRRAVEADVEAGLVPLFLCATVG-TTSTTAV----DNV  265 (499)
Q Consensus       208 ~G~--------g--~~~v~~v~~~~~~~~~~d~-------~~L~~~i~~~~~~g~~p~~vv~t~g-tt~~G~i----d~l  265 (499)
                      .+-        +  ...+..+|....  ...+.       +.+++.+.+      .+.+|++.-. ....|.+    +.+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~------~iAAvi~EPi~qg~gG~~~~~~~~l  224 (422)
T PRK05630        153 CDPEGGMHSLWKGTLPEQIFAPAPPV--RGSSPQEISEYLRSLELLIDE------TVAAIIIEPIVQGAGGMRFHDVALI  224 (422)
T ss_pred             CCCcccccccccccCCCCeEcCCCcc--cCCChHHHHHHHHHHHHHHhh------ceEEEEEechhcCcCCcccCCHHHH
Confidence            221        0  013344544311  11122       233333322      2334444331 3334544    568


Q ss_pred             hHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCC--cc
Q 010842          266 EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD--PE  342 (499)
Q Consensus       266 ~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~--~~  342 (499)
                      ++|.++|++||+.+++|.++-|+.....-+.....++ ..|.+++  -|.++.. ...|+++.+++  +.+.+...  ..
T Consensus       225 ~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~~--i~~~~~~~~~~~  299 (422)
T PRK05630        225 EGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGV-TPDIMCV--GKALTGGFMSFAATLCTDK--VAQLISTPNGGG  299 (422)
T ss_pred             HHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCC-CCCeeee--echhhcCccccceeeccHH--HHHHHhccCCCC
Confidence            9999999999999999999866532211111112344 3788866  6888554 24677766653  22333211  00


Q ss_pred             CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCceEE
Q 010842          343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFALV  420 (499)
Q Consensus       343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v  420 (499)
                      .+...          .  |. .+.+..+....++++.+..+   ...++..++.++|.+.|+.+.....+.+  -...++
T Consensus       300 ~~~h~----------~--T~-~g~Pla~aaa~aaL~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~  363 (422)
T PRK05630        300 ALMHG----------P--TF-MANPLACAVAHASLEIIETG---MWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIG  363 (422)
T ss_pred             ccccC----------C--CC-cCCHHHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEE
Confidence            00000          0  00 12122223334445555333   3455667777777776664322111111  123344


Q ss_pred             EEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          421 CFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       421 ~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      .+.+....         ....+.+.+.++|..+ .+.   + .++|+... ..+|++|||+++++|.++.+
T Consensus       364 ~ie~~~~~---------~~~~~~~~~~~~Gl~~-~~~---g-~~l~~~Pp-L~it~~~i~~~~~~l~~al~  419 (422)
T PRK05630        364 VVEMEQPV---------DMEEATQAAVDHGVWL-RPF---G-RLVYVMPP-YITTSEQIAQICAALAAAVK  419 (422)
T ss_pred             EEEECCcc---------cHHHHHHHHHHCCeEE-Eec---C-CEEEEECC-ccCCHHHHHHHHHHHHHHHh
Confidence            45553211         1346777888889543 221   3 47898874 67899999999999998764

>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=99.17  E-value=3.1e-09  Score=101.57  Aligned_cols=307  Identities=14%  Similarity=0.061  Sum_probs=191.2

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~  206 (499)
                      .-.+|+.    +++.+|.+++         ++.+-|-.++..++.+...           .+++|++.+..++.+.++.+
T Consensus       141 HldlE~~----iakF~G~E~a---------ivYs~gF~ti~S~ipafsK-----------rGDIi~~de~~nfaIq~Glq  196 (467)
T KOG1358|consen  141 HLDLEKR----IAKFMGTEDA---------IVYSYGFSTIESAIPAFSK-----------RGDIIFVDEAVNFAIQKGLQ  196 (467)
T ss_pred             ecccHHH----HHHhhCCcce---------eeeccccchhhhcchhhhc-----------cCcEEEEehhhhHHHHHHHh
Confidence            3456666    9999999876         5555444333334444322           47789999999999999887


Q ss_pred             HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH----HcCC---ccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842          207 LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV----EAGL---VPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV  279 (499)
Q Consensus       207 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~----~~g~---~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l  279 (499)
                      +.--   .+++..       ..|+++|++.+.+.+    +..+   .-.+||+..-.-++|.+-|+.+|.++..+|...+
T Consensus       197 lSRS---~i~~Fk-------hndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~Rv  266 (467)
T KOG1358|consen  197 LSRS---TISYFK-------HNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRV  266 (467)
T ss_pred             hhhh---eeEEec-------CCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEE
Confidence            7655   666654       448888888775433    2222   1236777777788999999999999999999999


Q ss_pred             EeeccccchhccC-cc--chhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          280 HVDAAYAGSACIC-PE--FRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       280 hvD~A~g~~~~~~-~~--~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      ++|..|..+.+.. ..  ..+...++...|.++.+.--.+..  +.|+..-+.--...+.++. .+|.+.          
T Consensus       267 ildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas--~GgFc~G~~~i~~hQrLSg-~~Y~fS----------  333 (467)
T KOG1358|consen  267 ILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALAS--GGGFCAGKSFIADHQRLSG-SGYCFS----------  333 (467)
T ss_pred             EEecccccccccccCccccccCCCCccceeeeeecccccccc--cCceeecceeeEeeeeccc-cceeee----------
Confidence            9999887654321 00  011222355688888887555432  2233222211001111111 123222          


Q ss_pred             CCCcccCCCCCCC---cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcc
Q 010842          357 FKDWQVGTGRRFK---SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSA  433 (499)
Q Consensus       357 ~~~~~~~~sr~~~---al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~  433 (499)
                               +..-   +-++..++..+  +.-.++++........+.+.|+...++++...+.++++-.++.+.. .+-+
T Consensus       334 ---------AslPp~la~aa~~ai~i~--~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~-~s~e  401 (467)
T KOG1358|consen  334 ---------ASLPPYLAGAAIKAILIE--EWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSY-GSRE  401 (467)
T ss_pred             ---------ccCchhhhhhHHHHHHHH--hhCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccc-cchH
Confidence                     1111   12222233332  3333466667777788888998888899999999999888876632 1112


Q ss_pred             hhHHHHHHHHHHHHhcCCEEEEeeeEC------CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          434 DTEMLNRKLLDWVNSTGRVYLTHTIVG------GLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       434 ~~~~~~~~l~~~l~~~g~~~~~~~~~~------g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +-..+-+.+.++...++........+.      -..-+|+|+ +...+++||+++.+.|++.+..+
T Consensus       402 ~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~-~a~~seeel~ra~~~ik~~~~~~  466 (467)
T KOG1358|consen  402 KEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICV-SAGMSEEELERAAELIKEVASAV  466 (467)
T ss_pred             HHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEE-eCCCCHHHHHHHHHHHHHHHHhh
Confidence            223445667777666665443322221      124699999 58899999999999999988764

>TIGR03251 LAT_fam L-lysine 6-transaminase

Probab=99.17  E-value=5.5e-08  Score=99.99  Aligned_cols=289  Identities=12%  Similarity=0.052  Sum_probs=146.9

Q ss_pred             EEEcCChHHHHHHHHHHHHHHHHhHhhhhcc----CCeEEEcCCCCchhHHHHHHHhCCC-CCC---e----EEe--e--
Q 010842          156 GVIQNTTSDSILVTLIAARDRALDAVGAENM----HKLVVYGSDQTHSTFAKVCKLAGVS-PAN---I----RAL--P--  219 (499)
Q Consensus       156 g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~----~~~~i~~s~~~H~s~~ka~~~~G~g-~~~---v----~~v--~--  219 (499)
                      ..|+++||||+..|+..||....+.....|.    ++.+|-....-|-...-+....|.. ...   .    ..+  |  
T Consensus       106 v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~  185 (431)
T TIGR03251       106 LFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKL  185 (431)
T ss_pred             EEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcc
Confidence            4899999999999999998653110000121    1223444445565554444443421 000   0    001  1  


Q ss_pred             ---CCCCCCCc-------cCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc----CChhHHHHHHHHhCCEEEeeccc
Q 010842          220 ---TSVDANFS-------LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----DNVEPLAEVANEYGIWVHVDAAY  285 (499)
Q Consensus       220 ---~~~~~~~~-------~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d~l~~I~~ia~~~~~~lhvD~A~  285 (499)
                         .+.+. ..       -+++++++.+..   .+..+.+|++.-.....|.+    +.+++|.++|++||+.+++|+++
T Consensus       186 ~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~  261 (431)
T TIGR03251       186 TFPLDAPN-LDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQ  261 (431)
T ss_pred             cCCccccc-cchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecch
Confidence               11000 00       123344444432   23456677777655556765    46899999999999999999999


Q ss_pred             cchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCch-hHHH-hhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842          286 AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPG-LLVK-ALSTDPEYLKNKPSESNSVVDFKDWQVG  363 (499)
Q Consensus       286 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~-~l~~-~~~~~~~yl~~~~~~~~~~~~~~~~~~~  363 (499)
                      .|+.....-+.....++ ..|.+++.  |.+  | .+|++ .+++- .... .+.. +....              .+ -
T Consensus       262 tG~GrtG~~~a~~~~gv-~PDi~~~g--K~~--~-~~g~~-~~~~i~~~~~~~~~~-~~~~~--------------~T-~  318 (431)
T TIGR03251       262 TGVGLTGTAWAYQQLGV-QPDIVAFG--KKT--Q-VCGIM-AGRRVDEVADNVFAV-PSRLN--------------ST-W  318 (431)
T ss_pred             hccCccchHHHHHhcCC-CCCEEEec--ccC--c-cceEE-ecchHHHhhhhcccC-ccccC--------------CC-C
Confidence            87533211111112344 38888864  443  3 34444 33321 1100 0100 00000              01 1


Q ss_pred             CCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEecCCCCCCcchhHHHH
Q 010842          364 TGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLN  439 (499)
Q Consensus       364 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~  439 (499)
                      .+.+.......+++..+..++   ..++..++.+++.+.|++    .|++..-......++.+.+.+         ....
T Consensus       319 ~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~---------~~~~  386 (431)
T TIGR03251       319 GGNLVDMVRATRILEIIEEER---LVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPS---------TADR  386 (431)
T ss_pred             CCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCC---------HHHH
Confidence            111212223334444443333   334444555555555543    332211111223445555533         2235


Q ss_pred             HHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          440 RKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       440 ~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      ..+.+.+.++|.++. +.   +...+|+++ +..+|++||++++++|.+
T Consensus       387 ~~~~~~l~~~Gvl~~-~~---g~~~lr~~P-~l~~t~~eid~~l~~l~~  430 (431)
T TIGR03251       387 DEVIRQLYREGVLLL-GC---GERSIRFRP-PLTVTREEIDAAIDAIRR  430 (431)
T ss_pred             HHHHHHHHhCCeEEe-cC---CCCeEEEEC-CccCCHHHHHHHHHHHHh
Confidence            678888888896542 21   335699988 478999999999999876

Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.

>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]

Probab=99.15  E-value=1.2e-08  Score=97.69  Aligned_cols=306  Identities=11%  Similarity=0.054  Sum_probs=177.7

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCe-EEEcCCCCchhHH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKL-VVYGSDQTHSTFA  202 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~-~i~~s~~~H~s~~  202 (499)
                      +.....+-.++.+.++++++.|+++     --+++.+|+|...-++.+.....          .+. -|....-+.++..
T Consensus        45 sk~~~~v~~~a~~~lreLl~iPd~Y-----~VlflqGGat~qf~~~p~nLl~~----------~~~~yv~~g~Ws~~a~~  109 (365)
T COG1932          45 SKEFKNVLEEAEKDLRELLNIPDDY-----KVLFLQGGATGQFAMAPMNLLGK----------RGTDYVDTGAWSEFAIK  109 (365)
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCccHHHHHHHHHhhhcc----------cCceeEeeeehhHhHHH
Confidence            3445566667788899999999986     23455666776555555544321          111 1222222233344


Q ss_pred             HHHHHhC-CCCCCeEEeeCCCCCC-CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC-hhHHHHHHHHhCCEE
Q 010842          203 KVCKLAG-VSPANIRALPTSVDAN-FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN-VEPLAEVANEYGIWV  279 (499)
Q Consensus       203 ka~~~~G-~g~~~v~~v~~~~~~~-~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~-l~~I~~ia~~~~~~l  279 (499)
                      .+-++.. .   .+..+.....+. .-.+++..+  +.++.      .+|+.+...|.+|+--| ...+..   +  ..+
T Consensus       110 eA~~~~~~~---~~~~~~~~~~~~~~iP~~~~~~--~~~~~------ayv~~~~NeTi~Gv~v~~~p~~~~---~--~~~  173 (365)
T COG1932         110 EAKKVGKQP---KLIDARIEEAGYGSIPDLSKWD--FSDND------AYVHFCWNETISGVEVPELPDIGS---D--GLL  173 (365)
T ss_pred             HHHHhcccc---cccccceeccCccCCCChhhcc--cCCCc------cEEEEecCCcccceEccCCCCCCC---C--ceE
Confidence            4433332 2   222222111111 133444333  22221      26889998999998633 233221   1  789


Q ss_pred             EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCC-CCCCCcccC
Q 010842          280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKP-SESNSVVDF  357 (499)
Q Consensus       280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~-~~~~~~~~~  357 (499)
                      ++|+.-+.+....        .+.+.|.|.++.+|.++ |-|.+++++|+.. +.+.-+. .|.-+.... .+.+.    
T Consensus       174 v~D~SS~ilsr~i--------Dvsk~dviyagaQKnlG-paGltvvIvr~~~-l~r~~~~~~P~if~y~~~~~~~s----  239 (365)
T COG1932         174 VADASSAILSRPI--------DVSKYDVIYAGAQKNLG-PAGLTVVIVRPDL-LERAESYTLPSIFDYLTHADNGS----  239 (365)
T ss_pred             EEecccHHhcCCC--------ChhHcceEEEehhhccC-ccceEEEEEcHHH-HhcccccCCchHhhchhhhccCC----
Confidence            9998765543332        34458999999999998 6679999998753 3222121 222111110 00000    


Q ss_pred             CCcccCCCCCCCcHHHHHH---HHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC---CCceEEEEEecCCCCC
Q 010842          358 KDWQVGTGRRFKSLRLWMV---LRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP---RHFALVCFRLNPYPHS  430 (499)
Q Consensus       358 ~~~~~~~sr~~~al~~~~~---l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~---~~~~~v~f~~~~~~~~  430 (499)
                          .-.+.  ..+.+++.   ++.+ ..-|++.+.++..+.++.|++.+.+.+-+.-...   .....|||.+..    
T Consensus       240 ----~yNTP--ptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~----  309 (365)
T COG1932         240 ----MYNTP--PTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTLVD----  309 (365)
T ss_pred             ----ccCCc--HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccceeEEEEcCc----
Confidence                00111  11222222   2222 4567899999999999999999998743332221   234568898864    


Q ss_pred             CcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          431 GSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       431 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                           .++.+.+++.+.++|.+...+..  ..+.+|+++. .....++++.|++-++.+.++
T Consensus       310 -----~~ld~~fv~eae~~gl~~lkGhr--~vgGmRasiy-nA~~~e~veaL~~fm~~f~~~  363 (365)
T COG1932         310 -----AELDKGFVAEAEAAGLIYLKGHR--SVGGLRASIY-NAVPLEDVEALTDFMDWFEET  363 (365)
T ss_pred             -----HHHHHHHHHHHHHcCCceecccc--CCCceeeeee-cCCCHHHHHHHHHHHHHHHHh
Confidence                 46788899999999977766632  2233999995 678999999999999887664

>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional

Probab=99.14  E-value=4.4e-08  Score=100.71  Aligned_cols=304  Identities=11%  Similarity=0.017  Sum_probs=151.3

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcC-CCCchhHHHHH--
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGS-DQTHSTFAKVC--  205 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s-~~~H~s~~ka~--  205 (499)
                      ..+.++.+.|++++....        ...|+++||+|+..|+..||...         .+..|+.. ...+.+.....  
T Consensus        88 ~~~~~la~~l~~~~p~~~--------~v~f~~sGseA~e~AlklAr~~t---------gr~~i~~~~~~~~h~~~~~~~g  150 (431)
T PRK06209         88 AIELDAAESFLELIDGAD--------MVKFCKNGSDATSAAVRLARAYT---------GRDLVARCADHPFFSTDDWFIG  150 (431)
T ss_pred             HHHHHHHHHHHHhCCccc--------eEEEecCHHHHHHHHHHHHHHHh---------CCCeEEEeccCccccccccccc
Confidence            344455667888773212        24899999999999999998763         12233322 11211111100  


Q ss_pred             -HH--hCCCCCCe-EEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842          206 -KL--AGVSPANI-RALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV  281 (499)
Q Consensus       206 -~~--~G~g~~~v-~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv  281 (499)
                       ..  .|.....+ ..+.+.     .-|+++|++.+++.   ...+.+|++-......+..+.+++|.++|++||+.+++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~---~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~  222 (431)
T PRK06209        151 TTPMSAGIPASVSALTVTFR-----YNDIASLEALFEDH---PGRIACVILEPATADEPQDGFLHEVRRLCHENGALFIL  222 (431)
T ss_pred             cCCCCCCCChhHhccccccC-----CCCHHHHHHHHHhC---CCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence             00  01100000 011111     22889999988642   22343444433222233334599999999999999999


Q ss_pred             eccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcc
Q 010842          282 DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQ  361 (499)
Q Consensus       282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~  361 (499)
                      |+++.|+... ........++ ..|.+++  -|.++..+..|.+..++.  +...+...   ..+..         ..+.
T Consensus       223 DEv~tG~~~~-~~g~~~~~gv-~PDi~t~--gK~lggG~p~~av~~~~~--i~~~~~~~---~~~~~---------~~~~  284 (431)
T PRK06209        223 DEMITGFRWH-MRGAQKLYGI-VPDLSCF--GKALGNGFAVSALAGKRE--YMELGGLE---HTDRE---------RVFL  284 (431)
T ss_pred             EcccccCCcC-cchhhHHhCC-Ccceeee--hhhhcCCcccEEEEEHHH--HHhhhccc---ccCCC---------Ccee
Confidence            9998665321 1001111244 3687665  688876566777777643  21221000   00000         0000


Q ss_pred             cCCCCCC---CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEE-E-cCCCceEEEEEecCCCCCCc
Q 010842          362 VGTGRRF---KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEI-V-VPRHFALVCFRLNPYPHSGS  432 (499)
Q Consensus       362 ~~~sr~~---~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~-~-~~~~~~~v~f~~~~~~~~~~  432 (499)
                      ...+...   .+....++++.+..++   ..++..++.+++++.|++    .+ +.. + .......+.+......   .
T Consensus       285 ~~~T~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~~~-~~~~vr~~G~~~~~~~~~~~~~---~  357 (431)
T PRK06209        285 LSTTHGAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAGVNEAAAEHG-LQDHVRVSGRPCCLTYSTLDGN---G  357 (431)
T ss_pred             eccCCCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeecceEEEEEecCCcc---c
Confidence            0111111   2233445555554333   344555555566655543    32 211 1 1111111112111110   0


Q ss_pred             chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          433 ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       433 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      .........+.+++.++|..+ .        .++++   ..+|++||+++++++.++.+++.
T Consensus       358 ~~~~~~~~~~~~~l~~~Gi~~-p--------~l~is---~~ht~~dId~~l~~l~~~l~~~~  407 (431)
T PRK06209        358 QPSQAFRTLFLQETIRRGVLM-P--------SLVVS---YAHGDADIERTIDAVHGALGVYR  407 (431)
T ss_pred             CCcHHHHHHHHHHHHHCCccc-c--------ccccc---ccCCHHHHHHHHHHHHHHHHHHH
Confidence            011234456778888889643 1        13333   45799999999999999888763

>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]

Probab=99.08  E-value=2.5e-07  Score=92.59  Aligned_cols=320  Identities=11%  Similarity=0.068  Sum_probs=172.8

Q ss_pred             HHHHHHcCC-CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccC-CeEEEc-CCCCchhHHHHHHHhCCC-
Q 010842          136 DWLATMLKL-PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMH-KLVVYG-SDQTHSTFAKVCKLAGVS-  211 (499)
Q Consensus       136 ~~la~l~g~-~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~-~~~i~~-s~~~H~s~~ka~~~~G~g-  211 (499)
                      +.|+++..- +-+       ..+|++|||+|+-+|+..++......    |.+ +-.++. ....|-+..-++.+.|.. 
T Consensus        94 ~~L~~~aP~~~l~-------~vFf~~sGSeAvEtAlKma~qY~~~~----G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~  162 (449)
T COG0161          94 EKLAELAPEGGLD-------HVFFTDSGSEAVETALKMALQYWRAR----GQPQRKKFISRRNGYHGDTLGAMSVGGPVA  162 (449)
T ss_pred             HHHHHhCCCCCcc-------EEEEeCCchHHHHHHHHHHHHHHHhc----CCCcceEEEEeccCcCcccchheeccCchh
Confidence            347777751 111       34899999999999999998765443    333 222333 344466655555554421 


Q ss_pred             ---------CCCeEEeeCCC---C---CCCc----cCHHHHHHHHHHHHHcC-CccEEEEEecCCCc-ccccCC----hh
Q 010842          212 ---------PANIRALPTSV---D---ANFS----LSPQLLRRAVEADVEAG-LVPLFLCATVGTTS-TTAVDN----VE  266 (499)
Q Consensus       212 ---------~~~v~~v~~~~---~---~~~~----~d~~~L~~~i~~~~~~g-~~p~~vv~t~gtt~-~G~id~----l~  266 (499)
                               ...+..+|...   .   +.+.    -..++||+.|.+.   | ..+.++++--.--. .|.+-|    ++
T Consensus       163 ~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~---g~~~IAAfI~EPv~g~agG~~~pp~~Yl~  239 (449)
T COG0161         163 LRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEH---GPETIAAFIVEPVVGGAGGMLVPPPGYLK  239 (449)
T ss_pred             hhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhc---CcccEEEEEecccccccCCcccCChHHHH
Confidence                     11233444332   0   1011    2245566655542   3 33333333322222 555533    79


Q ss_pred             HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCC-ccCC
Q 010842          267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD-PEYL  344 (499)
Q Consensus       267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~-~~yl  344 (499)
                      ++.+||++||+.|+.|.+--|+-....-+.....++ .-|.+++.  |.+... ...|.++++++  +.+.+... ..-+
T Consensus       240 ~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi-~PDi~~~a--KGLT~GY~Pl~a~l~~~~--I~~~~~~~~~~~f  314 (449)
T COG0161         240 RVREICDKYGILLIADEVATGFGRTGKMFACEHAGI-VPDILCLA--KGLTGGYLPLSAVLTSDR--IYEAFSDGDAGAF  314 (449)
T ss_pred             HHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCC-CCCeeeec--ccccccchhhHhHhhhHH--HHHHHhcccCCee
Confidence            999999999999999998766643322222222333 26777764  766332 23566666654  22333332 1111


Q ss_pred             CCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEcCC--CceEEE
Q 010842          345 KNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEIVVPR--HFALVC  421 (499)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~--~~~~v~  421 (499)
                                      ....+.....++..+++..+..-.-+.++++..++..+|.+.|++ +++...+.+.  ...+..
T Consensus       315 ----------------~HG~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~  378 (449)
T COG0161         315 ----------------MHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGA  378 (449)
T ss_pred             ----------------ccCCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEE
Confidence                            112222334555555555543222234566667888888888886 4433344332  223334


Q ss_pred             EEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842          422 FRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       422 f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~  496 (499)
                      +.+..+......--.....++.+...++|.+ +.+.   |. .+=++.- .-.|++||+++++++.+.+++..++
T Consensus       379 iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~-iRp~---g~-~i~~~PP-liit~~eid~l~~~l~~al~~~~~~  447 (449)
T COG0161         379 IELVADKATKTPFEARVGARVRAAALERGLL-IRPL---GD-VIYLMPP-LIITREEIDELVDALREALDETLAD  447 (449)
T ss_pred             EEEecccccccchhhhHHHHHHHHHHHCCeE-Eeec---CC-EEEEcCC-ccCCHHHHHHHHHHHHHHHHHHHhc
Confidence            4554432100000134456777888888943 3332   22 3444442 4569999999999999999877654

>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]

Probab=99.05  E-value=8.8e-08  Score=90.88  Aligned_cols=329  Identities=15%  Similarity=0.147  Sum_probs=184.5

Q ss_pred             CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC
Q 010842          117 VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ  196 (499)
Q Consensus       117 ~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~  196 (499)
                      ..-.|..+...-.|...    +.+.||+....       -.-.+-|.|.++..+..-...        -.++.+..+..+
T Consensus        71 GDEAYagsrs~~~L~~a----vkdifGfq~~i-------PthQGRgAE~Il~~i~ik~~~--------~~pg~~~~~~sN  131 (471)
T COG3033          71 GDEAYAGSRSYYALADA----VKDIFGFQYTI-------PTHQGRGAENILIPILIKKGE--------QEPGSKMVAFSN  131 (471)
T ss_pred             cchhhcccccHHHHHHH----HHHhcCceeee-------eccCCccHHHHHHHHHhhhcc--------ccCCcccccccc
Confidence            34467777777777776    67778885431       011223445555544321100        114445556667


Q ss_pred             CchhHHHH-HHHhCCCCCCeEEeeCCCCCC--------CccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CC
Q 010842          197 THSTFAKV-CKLAGVSPANIRALPTSVDAN--------FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DN  264 (499)
Q Consensus       197 ~H~s~~ka-~~~~G~g~~~v~~v~~~~~~~--------~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~  264 (499)
                      .|+-..++ ....|.   .++-+++++..+        +.+|++.|++.|++-.. ...|.++.....++..|..   +.
T Consensus       132 ~~FdTTr~h~~~ng~---~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~-~nvp~I~~tiT~NsagGQpVSm~n  207 (471)
T COG3033         132 YHFDTTRGHIQINGA---TPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGA-DNVPYIVLTITNNSAGGQPVSMAN  207 (471)
T ss_pred             ceecchhHHHHhcCC---ccccccccccccccccCCCCCccCHHHHHHHHHHhCc-ccCcEEEEEEeccccCCCcchHHh
Confidence            88876555 456666   566665543211        47899999999987543 3457655555555655643   78


Q ss_pred             hhHHHHHHHHhCCEEEeecc-ccchhccC----ccchhh------hcCCCCCceeEecccccccCCCcceEEEEeCchhH
Q 010842          265 VEPLAEVANEYGIWVHVDAA-YAGSACIC----PEFRHY------LNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLL  333 (499)
Q Consensus       265 l~~I~~ia~~~~~~lhvD~A-~g~~~~~~----~~~~~~------~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l  333 (499)
                      ++++.+||++|+++++.|+| |+-.+.+.    +.|++.      ..-+..+|-++.|+.|-..++. .|++.++|+..+
T Consensus       208 ~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnm-GGfl~~~D~~~f  286 (471)
T COG3033         208 MKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNM-GGFLCFKDDSFF  286 (471)
T ss_pred             HHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceecc-ccEEEecCccHH
Confidence            89999999999999999987 33333333    223321      0114469999999999998885 588899998522


Q ss_pred             ---HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHH-HHHHHHHHHHHHHHHHHHhcCCCe
Q 010842          334 ---VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNL-QSHIRSDIRLAKMFEGFVKSDPRF  409 (499)
Q Consensus       334 ---~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~-~~~~~~~~~~a~~l~~~L~~~~~~  409 (499)
                         ...-...   +...     +.+   .|+--.||...  ++...|+    +++ ..++++.....+||.+.|.+. |+
T Consensus       287 Dvy~~~~~~~---V~~e-----G~~---tYGgl~Grdme--alAvGL~----e~~~~~yl~~Rv~Qv~YL~~~l~~~-GV  348 (471)
T COG3033         287 DVYEECRTLV---VVQE-----GFP---TYGGLAGRDME--ALAVGLR----EGVNFDYLAHRVAQVQYLADGLEEA-GV  348 (471)
T ss_pred             HHHHHHHhhe---Eeec-----ccc---ccCcccchhHH--HHHHHHH----HhcCcHHHHHHHHHHHHHHHHHHhc-CC
Confidence               1111111   1110     111   11111122222  2222232    222 245566667778888889887 88


Q ss_pred             EEEcCCCceEEEEEec---CCCCCCcchhHHH-HHHHHHHHH-hcCCEEEEeeeE-------CC------EEEEEEeccC
Q 010842          410 EIVVPRHFALVCFRLN---PYPHSGSADTEML-NRKLLDWVN-STGRVYLTHTIV-------GG------LYMLRFAVGA  471 (499)
Q Consensus       410 ~~~~~~~~~~v~f~~~---~~~~~~~~~~~~~-~~~l~~~l~-~~g~~~~~~~~~-------~g------~~~lRi~~~~  471 (499)
                      .++.+....-+.+...   |.-   .  .+++ .+.+.-.|. +.|+-.+.-+.+       .+      -..+|+++--
T Consensus       349 pi~~paGGHavfvda~~~lphi---p--~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipR  423 (471)
T COG3033         349 PIVQPAGGHAVFVDAGKFLPHI---P--AEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPR  423 (471)
T ss_pred             eeEecCCCceEEeehhhhcCCC---C--hhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccc
Confidence            8776655544443321   210   0  1111 334444443 334322221111       11      1469999843


Q ss_pred             CCCcHHHHHHHHHHHHHHHHH
Q 010842          472 SLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       472 ~~~t~~di~~l~~~l~~~~~~  492 (499)
                      ..-|.+++|.++++++++.++
T Consensus       424 rtYt~~HmD~V~~a~~~l~e~  444 (471)
T COG3033         424 RTYTQTHMDFVIEAFKALKEN  444 (471)
T ss_pred             cccchhHHHHHHHHHHHHHhc
Confidence            344899999999999888754

>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]

Probab=98.98  E-value=3.7e-09  Score=95.89  Aligned_cols=233  Identities=15%  Similarity=0.111  Sum_probs=149.5

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH-HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS-DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC  205 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt-~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~  205 (499)
                      ...+-.+.....-.+.|+-.-.      ..++++-+| ++.-.++...|.+. ++      .+.+|+ ......|-.|.+
T Consensus        55 l~~isne~a~~~i~l~glhav~------nc~vvpl~tgmslslc~~s~r~kr-pk------akyiiw-~ridqks~~ksi  120 (432)
T KOG3843|consen   55 LACISNEFAKDAIHLAGLHAVA------NCFVVPLATGMSLSLCFLSLRHKR-PK------AKYIIW-LRIDQKSCFKSI  120 (432)
T ss_pred             HHHHHHHHHHHHHHHhhhhhhh------ceeEEeccccccHHHHHHHHhhcC-Cc------ccEEEE-EecchHHHHHHH
Confidence            3344445555566777764321      123333333 55556666666542 11      244444 566778888888


Q ss_pred             HHhCCCCCCeEEeeCCCC-CCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHhCCEEEe
Q 010842          206 KLAGVSPANIRALPTSVD-ANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEYGIWVHV  281 (499)
Q Consensus       206 ~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhv  281 (499)
                      -..|+   +++.|..-.+ +....|++.+++.|++..     |-+|.+.+.||++-+.   |.+++|+.||..|+++.+|
T Consensus       121 ~~agf---epiiie~i~d~d~l~tdleav~~~iee~g-----~dcilci~sttscfapr~pd~leaiaaica~~diphiv  192 (432)
T KOG3843|consen  121 IHAGF---EPIIIENILDGDELITDLEAVEAIIEELG-----EDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIV  192 (432)
T ss_pred             HhcCC---CceeeeccccchHHHHhHHHHHHHHHHhC-----CceEEEEeecccccCCCCCchHHHHHHHHHccCchhhh
Confidence            88999   8877754322 236779999999888753     2356667766665544   8899999999999999999


Q ss_pred             eccccchhccCccchhh---hcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842          282 DAAYAGSACICPEFRHY---LNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK  358 (499)
Q Consensus       282 D~A~g~~~~~~~~~~~~---~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  358 (499)
                      ..|||.-.   .+..+.   ...+.++|.++-+..|.+.+|.|..++..-+...++ ..  ...|.....          
T Consensus       193 nnayglqs---ee~i~~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq-~i--ak~ypgras----------  256 (432)
T KOG3843|consen  193 NNAYGLQS---EECIHKIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQ-EI--AKMYPGRAS----------  256 (432)
T ss_pred             ccccccch---HHHHHHHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHH-HH--HHhCCCccc----------
Confidence            99997642   222222   223567999999999999999887766432222121 11  111211110          


Q ss_pred             CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 010842          359 DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS  405 (499)
Q Consensus       359 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~  405 (499)
                              ....+.+..+|..+|..++.+...+..++-.+++..+.+
T Consensus       257 --------a~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~  295 (432)
T KOG3843|consen  257 --------ASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIK  295 (432)
T ss_pred             --------cCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence                    012467788888999999999988888877777766654

>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]

Probab=98.98  E-value=5.5e-07  Score=86.87  Aligned_cols=311  Identities=14%  Similarity=0.084  Sum_probs=186.1

Q ss_pred             ccccChhhHHHHHHHHHHHHHH-cCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842          120 NWLASPASTELEIVVMDWLATM-LKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH  198 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l-~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H  198 (499)
                      .|-.-.+...+-.+    ++++ ||-+...+..+.--++-|.|||-|+-.+..-.....         ++..|++|++++
T Consensus        64 ~Yl~i~G~~~f~~~----~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~---------~~~~vwis~PtW  130 (396)
T COG1448          64 NYLPIEGLPEFLEA----VQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFF---------PDATVWISDPTW  130 (396)
T ss_pred             ccCCcCCcHHHHHH----HHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhC---------CCceEEeCCCCc
Confidence            34444455555555    4443 563321111111134778899988877665443321         566799999999


Q ss_pred             hhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHh
Q 010842          199 STFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEY  275 (499)
Q Consensus       199 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~  275 (499)
                      .-........|+   ++...|.-...+-.+|.+.+-+.|++..+   .-+++.--++.||||.-   +..++|+++.++.
T Consensus       131 ~NH~~If~~aGl---~v~~Y~Yyd~~~~~~df~~mla~L~~a~~---~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r  204 (396)
T COG1448         131 PNHKAIFEAAGL---EVETYPYYDAETKGLDFDGMLADLKTAPE---GSVVLLHGCCHNPTGIDPTEEQWQELADLIKER  204 (396)
T ss_pred             HhHHHHHHhcCC---ceeeeeccccccccccHHHHHHHHHhCCC---CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc
Confidence            888888888999   99988875433446899998888876432   22345555678999986   5568899999999


Q ss_pred             CCEEEeeccccchhccCccch----hhhcCCCCCceeEecccccccCC---CcceEEEEeCchhHHHhhcCCccCCCCCC
Q 010842          276 GIWVHVDAAYAGSACICPEFR----HYLNGIERVDSFSFSPHKWLLSY---LDCCCLWVKQPGLLVKALSTDPEYLKNKP  348 (499)
Q Consensus       276 ~~~lhvD~A~g~~~~~~~~~~----~~~~g~~~aDsi~~~~hK~l~~p---~~~g~l~~r~~~~l~~~~~~~~~yl~~~~  348 (499)
                      |+.-.+|-||-|+.--.++-.    ...... .-=.++.|..|.++.-   .|+-.++..+.+...+.++.-..-++...
T Consensus       205 ~lip~~D~AYQGF~~GleeDa~~lR~~a~~~-~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~y  283 (396)
T COG1448         205 GLIPFFDIAYQGFADGLEEDAYALRLFAEVG-PELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNY  283 (396)
T ss_pred             CCeeeeehhhhhhccchHHHHHHHHHHHHhC-CcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhcc
Confidence            999999999988754333211    111111 1246788889988642   22333444555544444443222222211


Q ss_pred             CCCCCcccCCCcccCCCCCC-CcHHHHH------HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-C--CeEEEcCCCce
Q 010842          349 SESNSVVDFKDWQVGTGRRF-KSLRLWM------VLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD-P--RFEIVVPRHFA  418 (499)
Q Consensus       349 ~~~~~~~~~~~~~~~~sr~~-~al~~~~------~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~--~~~~~~~~~~~  418 (499)
                                      |.+. ...++..      .|+..=...+..+.+|..++++.|.+.|++. +  +|..+ ..+.+
T Consensus       284 ----------------SnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i-~~Q~G  346 (396)
T COG1448         284 ----------------SNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFI-ISQRG  346 (396)
T ss_pred             ----------------CCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchH-hhcCc
Confidence                            0010 1111111      2333334556778888999999999999872 2  35554 23445


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      +++|  .+.           +.+-+.+|.++.-+|+...   |    |+++.  ..++..|+.+.++|.++
T Consensus       347 MFsy--~Gl-----------s~~QV~rLree~~IY~v~s---G----Ri~va--Gl~~~ni~~va~ai~~v  395 (396)
T COG1448         347 MFSY--TGL-----------SPEQVDRLREEFGIYLVAS---G----RINVA--GLNTSNIDYVAKAIAAV  395 (396)
T ss_pred             eeec--CCC-----------CHHHHHHHHHhccEEEecC---C----eeeec--cCChhhHHHHHHHHHhh
Confidence            5544  332           2233455555444554332   2    88884  36788999999998875

>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]

Probab=98.92  E-value=3.5e-07  Score=85.03  Aligned_cols=323  Identities=15%  Similarity=0.136  Sum_probs=201.0

Q ss_pred             HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcC----CCCchhHHHHHH
Q 010842          131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGS----DQTHSTFAKVCK  206 (499)
Q Consensus       131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s----~~~H~s~~ka~~  206 (499)
                      ..-++..++.+.|..+..        +....+-.+|+..++...-+-.+       ++..|+.-    ...||+++..++
T Consensus       113 De~il~l~~~iVGA~e~E--------vavmNsLTvNlh~Ll~sFyKPTe-------kR~KILlE~kaFPSDhYAiesQ~~  177 (465)
T KOG3846|consen  113 DEPILPLLAPIVGAQENE--------VAVMNSLTVNLHSLLISFYKPTE-------KRFKILLEKKAFPSDHYAIESQCK  177 (465)
T ss_pred             chhhhhhhhhhccCCchh--------hhhHhhhhhHHHHHHHHhcCCcc-------hhhhhhhccCCCCchHHHHHhhhh
Confidence            334566788899987653        32223334566665543221000       12223322    236899999999


Q ss_pred             HhCCCCC-CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842          207 LAGVSPA-NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY  285 (499)
Q Consensus       207 ~~G~g~~-~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~  285 (499)
                      +-|+... ..+.+...+ |.-.+..+++-..|++   +|....+|+.+.....||..-++.+|...-+..|+.+-.|=||
T Consensus       178 lhG~~~e~sm~~iePRE-GEetlRteDILd~IEk---ngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAH  253 (465)
T KOG3846|consen  178 LHGISPENSMIQIEPRE-GEETLRTEDILDTIEK---NGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAH  253 (465)
T ss_pred             hcCCChHHheEEecccc-cccchhHHHHHHHHHh---cCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhh
Confidence            9999543 345555443 4457888888888765   4666778888888899999999999997777789999999888


Q ss_pred             cchhccCccchhhhcCCCCCceeEecccccccC-CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC-----CC
Q 010842          286 AGSACICPEFRHYLNGIERVDSFSFSPHKWLLS-YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF-----KD  359 (499)
Q Consensus       286 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~-----~~  359 (499)
                      +.+-...  +-+. .   ++|+.+|...|++++ +.|.|.+++.++.. ......-.+|+.........+.+.     +.
T Consensus       254 AvgNVpL--~LHd-W---gVDFACWCSYKYlnaGaGgIgGlFvHekh~-~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa  326 (465)
T KOG3846|consen  254 AVGNVPL--QLHD-W---GVDFACWCSYKYLNAGAGGIGGLFVHEKHT-KESLPRLAGWWGHDPSKRFQMDNVLELIPGA  326 (465)
T ss_pred             hhcCCce--EEee-c---CCceEEEeeecccccCCCccceeeeehhhh-cchhhHHhhhccCCcchhhhhccccccCccc
Confidence            7653322  1111 1   399999999999965 46678888876532 222233344444332211111111     11


Q ss_pred             cccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe-----------EEEcCC----CceEEEE
Q 010842          360 WQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRF-----------EIVVPR----HFALVCF  422 (499)
Q Consensus       360 ~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~-----------~~~~~~----~~~~v~f  422 (499)
                      .++..|.+.  ...++..+|..+.+-.+.+...+..-++.|+...++...+.           .++.|.    +...++.
T Consensus       327 ~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl  406 (465)
T KOG3846|consen  327 LGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSL  406 (465)
T ss_pred             cccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEE
Confidence            111122222  23456666777766668888888888888888877764332           233221    2333444


Q ss_pred             EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          423 RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      .+..+           +..+...|.++|.+.-    -+..+.+|++....+++-.||..++++|.++...+.
T Consensus       407 ~Fssp-----------~~~vfqeL~krGv~~D----kR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e  463 (465)
T KOG3846|consen  407 YFSSP-----------TPKVFQELHKRGVIGD----KRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLE  463 (465)
T ss_pred             EeCCC-----------chHHHHHHHHcCeecc----ccCCCceEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence            44332           3567777888884321    123467999998889999999999999999887654

>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]

Probab=98.90  E-value=7e-07  Score=85.94  Aligned_cols=286  Identities=13%  Similarity=0.028  Sum_probs=161.1

Q ss_pred             EEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEE-cCCCCchhHHHHHHHhCCCCCCeEEeeCCC------------
Q 010842          156 GVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVY-GSDQTHSTFAKVCKLAGVSPANIRALPTSV------------  222 (499)
Q Consensus       156 g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~-~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~------------  222 (499)
                      .+|++||||||-+||++||...         ....|+ ....-|-....++.+.|++   .++-+.+.            
T Consensus       112 vfF~nsGsEANelal~mar~Yt---------~~~diIa~r~~YHG~t~~t~glt~~~---~~k~~~~~~~~~~~~~~~Pd  179 (442)
T KOG1404|consen  112 VFFVNSGSEANELALKMARLYT---------GNLDIIARRNSYHGNTLYTLGLTGLS---PWKQNFPGVASGVHHTMNPD  179 (442)
T ss_pred             EEEecCCchHHHHHHHHHHHhc---------CCceEEEeeccccCCchhhcccccCC---cccccCCCCCCcccccCCCC
Confidence            4899999999999999999764         222344 3444576666666666662   22221110            


Q ss_pred             --CCCCccC-----HH----HHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEEeeccccc
Q 010842          223 --DANFSLS-----PQ----LLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAG  287 (499)
Q Consensus       223 --~~~~~~d-----~~----~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~  287 (499)
                        .+-|.=+     .+    +|+..|..+...  .+.+.++-......|.+.+    +++..++|+++|..++.|.++.|
T Consensus       180 p~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~--~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtG  257 (442)
T KOG1404|consen  180 PYRGIFGGSNEEEASDRYAKELEDLILYDGPE--TVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTG  257 (442)
T ss_pred             cccccCCCCchhhhHHHHHHHHHHHHHhcCCC--ceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhc
Confidence              0111111     23    333444333322  2333444333344588755    78999999999999999999988


Q ss_pred             hhccCccchhhhcCCCC----CceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842          288 SACICPEFRHYLNGIER----VDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVG  363 (499)
Q Consensus       288 ~~~~~~~~~~~~~g~~~----aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~  363 (499)
                      +....     .+.|++.    -|.+|+  -|.++.....|.+++..+  +...+.....|.+.-                
T Consensus       258 fGRtG-----~~wgfe~h~v~PDIvTm--AKgiGnG~Pl~AVvtt~E--Ia~v~~~~~~~fnTy----------------  312 (442)
T KOG1404|consen  258 FGRTG-----HMWGFESHGVVPDIVTM--AKGIGNGFPLGAVVTTPE--IADVLNQKSSHFNTY----------------  312 (442)
T ss_pred             ccccc-----ccccccccCCCccHHHH--HhhccCCCcceeeecCHH--HHHHHHhcccccccc----------------
Confidence            75432     1223222    344443  588877677888887664  224444433232221                


Q ss_pred             CCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcCCC--ceEEEEEecCCCCCCcchhHHHHH
Q 010842          364 TGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVPRH--FALVCFRLNPYPHSGSADTEMLNR  440 (499)
Q Consensus       364 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~--~~~v~f~~~~~~~~~~~~~~~~~~  440 (499)
                      .+.+..+....+.|+.+-+   +++.++..+...||.+.|.++. ..+++.+.+  .-++-..+..+......-......
T Consensus       313 ggnP~a~avg~aVL~Vike---e~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~  389 (442)
T KOG1404|consen  313 GGNPVACAVGLAVLKVIKE---ENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGA  389 (442)
T ss_pred             CCCchhHHHHHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHH
Confidence            2223223333344444433   4566777888999999988753 355555432  112223332211000000133455


Q ss_pred             HHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842          441 KLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI  486 (499)
Q Consensus       441 ~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l  486 (499)
                      .+-+.+.+.|..+ .-..+.|. ++|++.- .-.|++||+.+++..
T Consensus       390 ~i~~~cke~Gvlv-g~g~i~G~-vfriaPP-lciT~edi~f~~~~~  432 (442)
T KOG1404|consen  390 VIGEQCKELGVLV-GKGGIHGN-VFRIAPP-LCITKEDIDFAVEYF  432 (442)
T ss_pred             HHHHHHHHhCeee-ecccccce-EEEecCC-eeccHHHHHHHHHHH
Confidence            6677777788544 55555665 7999873 557999997777755

>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]

Probab=98.88  E-value=6.1e-06  Score=80.15  Aligned_cols=301  Identities=12%  Similarity=0.011  Sum_probs=163.6

Q ss_pred             cEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCC-eEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC---C-CC-Ccc
Q 010842          155 GGVIQNTTSDSILVTLIAARDRALDAVGAENMHK-LVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV---D-AN-FSL  228 (499)
Q Consensus       155 ~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~-~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~---~-~~-~~~  228 (499)
                      -..|+++||+||..||..||.....+.   ...+ .+|..-...|--..-++...+.   .-+.+|.++   + .. ---
T Consensus       118 rvff~nsGTeAne~ALK~Ark~~~~~~---~~~~t~~Iaf~nsyHG~tlgals~~~~---s~y~~~~~p~~p~v~~~~yn  191 (433)
T KOG1401|consen  118 RVFFCNSGTEANETALKFARKFTGKKH---PEKKTKFIAFENSYHGRTLGALSVTGN---SKYGLPFDPIAPDVVTAEYN  191 (433)
T ss_pred             EEEEecCCcHHHHHHHHHHHHhhcccC---CccceeEEEEecCcCCcchhHHHhhcc---cccCCCCCCCCCceeecccC
Confidence            358999999999999999997654321   1112 2444455556555445444333   222222211   0 00 023


Q ss_pred             CHHHHHHHHHHHHHcCCccEEEEEecCCCccccc--CC--hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCC
Q 010842          229 SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV--DN--VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIER  304 (499)
Q Consensus       229 d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i--d~--l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~  304 (499)
                      |+.+|++.++..+.   .+.+|++--..-.-|.+  +|  +..|..+|+++|+.++.|..+-|+....+.+.+...++ .
T Consensus       192 d~t~l~k~~~~h~~---~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~-~  267 (433)
T KOG1401|consen  192 DSTALEKLFESHKG---EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGV-T  267 (433)
T ss_pred             CHHHHHHHHHhCCC---ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCc-C
Confidence            79999999987542   13455555555555555  44  68899999999999999999988666555555444443 3


Q ss_pred             CceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHH---HHHHHHhc
Q 010842          305 VDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRL---WMVLRSYG  381 (499)
Q Consensus       305 aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g  381 (499)
                      -|.+|+  -|.|+.....|...++++-  ...++..-+ +.+.                .+-...++..   ..+|..+.
T Consensus       268 PDI~t~--aK~L~gGlPigA~~v~~kV--~~~i~~~~~-l~hg----------------~Tf~gnpLacsa~~~~l~~l~  326 (433)
T KOG1401|consen  268 PDITTV--AKPLGGGLPIGATGVRDKV--AEMISPGDH-LYHG----------------GTFSGNPLACSAGIKVLDELK  326 (433)
T ss_pred             Ccceee--hhhccCCceeEEEeehHHH--HhhcCCCCc-cccC----------------cccCCChhhhhHHHHHHHHHc
Confidence            677776  4888766778999998853  233433322 2111                1111233433   33444444


Q ss_pred             -HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC
Q 010842          382 -VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG  460 (499)
Q Consensus       382 -~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~  460 (499)
                       .+.++..-.....+++.+.+.+.+.+.-..-.--+..++-|.+..+. .    ....+.+-...+...+..   .....
T Consensus       327 ~~e~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~-~----~~~d~~~~~~ll~~~~~~---~~~~~  398 (433)
T KOG1401|consen  327 DPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPV-Y----KFADAAREQGLLILTLGK---GLLEE  398 (433)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeech-h----hhhhhhhhhhHHHHHHhc---ccccc
Confidence             34556666666778888888887765432221111122223222110 0    000111111122221110   00112


Q ss_pred             CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          461 GLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       461 g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      +..+.++.+++-.+|.|.++++++++.+...++-
T Consensus       399 gv~i~P~~~l~~~~~~E~i~~~l~i~~~~l~~~~  432 (433)
T KOG1401|consen  399 GVRIAPIYLLTVEHTPEVIQRLLTILEKVLSALN  432 (433)
T ss_pred             eEEEeccccccccCcHHHHHHHHHHHHHHHHHhc
Confidence            2233332233344568999999999998877653

>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase

Probab=98.85  E-value=1.1e-05  Score=88.18  Aligned_cols=231  Identities=15%  Similarity=0.116  Sum_probs=123.3

Q ss_pred             HHHHHHHHHHH--HcCCccEEEEEecC-CCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCC
Q 010842          231 QLLRRAVEADV--EAGLVPLFLCATVG-TTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE  303 (499)
Q Consensus       231 ~~L~~~i~~~~--~~g~~p~~vv~t~g-tt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~  303 (499)
                      +.+++.|++..  ..+..+.+|++--. ...-|.+-|    ++++.++|++||+.|+.|.++.|+......+.....|+.
T Consensus       567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~  646 (817)
T PLN02974        567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCK  646 (817)
T ss_pred             HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCC
Confidence            45666664321  11233444444432 233466532    799999999999999999999887544333333333443


Q ss_pred             CCceeEecccccccCCC-cceEEEEeCchhHHHhhcCCc--cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHH---HHH
Q 010842          304 RVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALSTDP--EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLW---MVL  377 (499)
Q Consensus       304 ~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~~~--~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l  377 (499)
                       .|.+++.  |.+...+ ..|.++++++  +.+.|....  ..+..                ..+....++...   ++|
T Consensus       647 -PDIi~~g--KgLtgG~~Plaa~l~~~~--I~~~f~~~~~~~~~~h----------------g~Ty~gnpl~cAaala~L  705 (817)
T PLN02974        647 -PDIACYA--KLLTGGLVPLAATLATEE--VFEAFRGPSKLDALLH----------------GHSYTAHPMGCAAAAKAL  705 (817)
T ss_pred             -CCEEeec--ccccCCCCccEEEEEcHH--HHHhhccccccCCccc----------------CCCCCcCHHHHHHHHHHH
Confidence             7888874  8876653 6788887764  223332110  00101                112222334444   445


Q ss_pred             HHhcHH-HHHHHHHHHHHHHHHHHHHH----hcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCC
Q 010842          378 RSYGVL-NLQSHIRSDIRLAKMFEGFV----KSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGR  451 (499)
Q Consensus       378 ~~~g~~-g~~~~~~~~~~~a~~l~~~L----~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~  451 (499)
                      +.+-.+ -++...++..++..++.+.|    ++.|.+.=+. ....++.+.+..... ++........++.+++. ++|.
T Consensus       706 ~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VR-g~Gl~~~iel~~~~~-~~~~~~~~a~~v~~~~~~~~Gl  783 (817)
T PLN02974        706 QWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVV-SLGTVLALELDAEGS-GSGYSSLYARSVVRRLRREDGI  783 (817)
T ss_pred             HHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEE-eeeeEEEEEEecCCc-ccccchHHHHHHHHHHHHhCCE
Confidence            444332 22344455555555555444    4444432221 122344444443210 00001234567777787 7885


Q ss_pred             EEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          452 VYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       452 ~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      +. .+  . | .++|+.. .+.++++++++++++|.+..
T Consensus       784 ~~-r~--~-G-nvi~l~p-P~~i~~e~l~~~~~~l~~~~  816 (817)
T PLN02974        784 YA-RP--L-G-NVVYLMC-GPTTSPETCTRLLRKVYRRL  816 (817)
T ss_pred             EE-Ee--c-C-CEEEEeC-CCCCCHHHHHHHHHHHHHHh
Confidence            43 22  2 2 4688776 48899999999999998753

>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]

Probab=98.81  E-value=2.3e-07  Score=84.32  Aligned_cols=253  Identities=11%  Similarity=0.025  Sum_probs=145.8

Q ss_pred             eEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHH
Q 010842          189 LVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPL  268 (499)
Q Consensus       189 ~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I  268 (499)
                      ..|+...+++.-+.-.+.+.++   +|+.||.++  +|.+++|++.+.++.+.+    |.++.+|.+.|++|.+--.+.|
T Consensus       112 eKIl~cPPtysMY~v~A~iNd~---eVvkvpl~p--dF~lnvdai~evl~~ds~----iK~~F~tSPgNPtg~~ik~~di  182 (375)
T KOG0633|consen  112 EKILDCPPTYSMYVVDAAINDA---EVVKVPLNP--DFSLNVDAIAEVLELDSK----IKCIFLTSPGNPTGSIIKEDDI  182 (375)
T ss_pred             cceeecCCcceeEEEEeecCCc---eEEEecCCC--CccccHHHHHHHHhcccc----ceEEEEcCCCCCCcccccHHHH
Confidence            4566555565544455677888   999999987  589999999999887643    6689999999999999776777


Q ss_pred             HHHHHHh-CCEEEeeccccchhccCccchhhhcCCCCCce-eEecccccccC-CCcceEEEEeCchhHHHh-hcCCccCC
Q 010842          269 AEVANEY-GIWVHVDAAYAGSACICPEFRHYLNGIERVDS-FSFSPHKWLLS-YLDCCCLWVKQPGLLVKA-LSTDPEYL  344 (499)
Q Consensus       269 ~~ia~~~-~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDs-i~~~~hK~l~~-p~~~g~l~~r~~~~l~~~-~~~~~~yl  344 (499)
                      -++.+-- |..++||.||--+.... ....+....  -.. +.-...|.++. ..-.|+-++.-  .+.+. .+..++|-
T Consensus       183 ~KiLe~p~nglVVvDEAYidFsg~~-S~~~lV~kY--pNLivlqTlSKsfGLAGiRvG~~~~~~--~ia~iln~~KaPYN  257 (375)
T KOG0633|consen  183 LKILEMPDNGLVVVDEAYIDFSGVE-SRMKLVKKY--PNLIVLQTLSKSFGLAGIRVGYGAFPL--SIAEILNRAKAPYN  257 (375)
T ss_pred             HHHHhCCCCcEEEEeeeeEeecccc-ccchHhHhC--CceeehhhhhhhcCcceeEeecccccH--HHHHHHHhccCCcc
Confidence            6666543 68899999985543211 101111111  111 11223344332 22233333221  12121 23344443


Q ss_pred             CCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEcCCCceEE
Q 010842          345 KNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG---VLNLQSHIRSDIRLAKMFEGFVKSDPRFE-IVVPRHFALV  420 (499)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~~~~~v  420 (499)
                      ...                       ..--++|.++.   .+.++...+...+-+.+|...|.++|.+. .+.+...+.+
T Consensus       258 iS~-----------------------~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFi  314 (375)
T KOG0633|consen  258 ISV-----------------------AGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFI  314 (375)
T ss_pred             ccc-----------------------hhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEE
Confidence            221                       11123333332   23344444555566677888888888765 3345566777


Q ss_pred             EEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEE-eeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          421 CFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLT-HTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       421 ~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~-~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      ..++.+.+       +...+.+..++. +.|.++-- ++...=++++|++++    |+|+-+-+++.++++
T Consensus       315 Li~v~~~~-------n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvG----t~EentvL~k~~K~~  374 (375)
T KOG0633|consen  315 LIEVTGGD-------NGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVG----TPEENTVLMKCLKQF  374 (375)
T ss_pred             EEEEcCCC-------cHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcC----CcccchHHHHHHHhh
Confidence            77775432       455666666554 44543322 223334689999997    556667777777654

>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]

Probab=98.80  E-value=2.7e-07  Score=90.31  Aligned_cols=151  Identities=21%  Similarity=0.167  Sum_probs=101.1

Q ss_pred             EEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHH
Q 010842          156 GVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRR  235 (499)
Q Consensus       156 g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~  235 (499)
                      +++++..+.|.+..+.+.-...     +..++... .+. ..|+++...+++.|.   .++.|...  +  +....+++.
T Consensus        86 ~~ivnnn~aAVll~~~al~~~~-----EvVis~g~-lV~-gg~~~v~d~~~~aG~---~l~EvG~t--n--~t~~~d~~~  151 (395)
T COG1921          86 AAIVNNNAAAVLLTLNALAEGK-----EVVVSRGE-LVE-GGAFRVPDIIRLAGA---KLVEVGTT--N--RTHLKDYEL  151 (395)
T ss_pred             eeeECCcHHHHHHHHhhhccCC-----eEEEEccc-ccc-CCCCChhHHHHHcCC---EEEEeccc--C--cCCHHHHHH
Confidence            5888887777766555442210     00001111 233 589999999999999   88777653  3  789999999


Q ss_pred             HHHHHHHcCCccEEEEEecCCCccccc--CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccc
Q 010842          236 AVEADVEAGLVPLFLCATVGTTSTTAV--DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPH  313 (499)
Q Consensus       236 ~i~~~~~~g~~p~~vv~t~gtt~~G~i--d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~h  313 (499)
                      +|.++++      ++.-++.++. |..  -++++++++||++|++++||.+-|...-.-+..+..+.  .++|.+++|++
T Consensus       152 AIne~ta------~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la--~GaDLV~~Sgd  222 (395)
T COG1921         152 AINENTA------LLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALA--LGADLVSFSGD  222 (395)
T ss_pred             HhccCCe------eEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHh--cCCCEEEEecc
Confidence            9999886      4555554432 433  36778999999999999999876553221122222221  24999999999


Q ss_pred             ccccCCCcceEEEEeCc
Q 010842          314 KWLLSYLDCCCLWVKQP  330 (499)
Q Consensus       314 K~l~~p~~~g~l~~r~~  330 (499)
                      |.|++|. +|++.-|..
T Consensus       223 KllgGPq-aGii~GkKe  238 (395)
T COG1921         223 KLLGGPQ-AGIIVGKKE  238 (395)
T ss_pred             hhcCCCc-cceEechHH
Confidence            9999995 777776653

>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]

Probab=98.78  E-value=9.4e-07  Score=89.69  Aligned_cols=367  Identities=14%  Similarity=0.094  Sum_probs=208.6

Q ss_pred             hhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCC-hHHHHHHHHHH-----HcccCCcccccC
Q 010842           51 PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVS-TAGFLGEMLCA-----CFNSVGFNWLAS  124 (499)
Q Consensus        51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~l~~-----~~n~~~~~~~~~  124 (499)
                      |..++...+..+| .|..+.++++++.+...++.. |.  .|.|.-.-+.. ++.++..++..     -+.+++...+++
T Consensus        85 P~~Ir~~~~l~~~-~~~~E~eml~~l~~ia~kNk~-~k--sfIGmGYyn~~vP~~I~RNilenp~W~TqYTPYQ~EIsQG  160 (1001)
T KOG2040|consen   85 PKSIRLKRPLKMD-KPLCESEMLQHLEDIASKNKI-WK--SFIGMGYYNTHVPAVILRNILENPGWYTQYTPYQAEISQG  160 (1001)
T ss_pred             chhhcccchhcCC-CCcCHHHHHHHHHHHHhhhhH-HH--HhhccccccccCcHHHHHHhhhCCcceeccCCCchhhhhh
Confidence            4455555555564 678899999999987766652 33  35442222333 34444444432     123344444555


Q ss_pred             hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842          125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka  204 (499)
                      ..-..+-.+.+  ++++.|+|-+       +..+..-||.|.-.-.++.|..          ++-.++++...|+.....
T Consensus       161 RLEsllNyQTm--i~dlTGL~~a-------NASLLDEgTAaaEAm~l~~~~~----------krkk~vvd~~~hpqtlsV  221 (1001)
T KOG2040|consen  161 RLESLLNYQTM--ITDLTGLPMA-------NASLLDEGTAAAEAMALCNRIN----------KRKKFVVDSNCHPQTLSV  221 (1001)
T ss_pred             hHHHHhhhHHh--hhhccCCccc-------chhhhccchhHHHHHHHHHhhc----------ccceEEecCCCCcchhhh
Confidence            55555666644  8999999865       3355555564432222223322          223378888999876555


Q ss_pred             HHH--hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842          205 CKL--AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD  282 (499)
Q Consensus       205 ~~~--~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD  282 (499)
                      ++.  -|+|. .+..++          +.+...-       ......|++..|.| .|.+.|.+++++.+++.|..+++-
T Consensus       222 ~~TRa~~~~i-~v~~~~----------~~~~~~s-------~~~v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s~vv~a  282 (1001)
T KOG2040|consen  222 VKTRAKGFGI-KVVVSD----------IKEADYS-------SKDVSGVLVQYPDT-EGSVLDFDELVELAHANGSLVVMA  282 (1001)
T ss_pred             hhccccccce-eEEecC----------HHHhhcc-------ccceeEEEEEcCCC-CCcccCHHHHHHHhhccCceEEEe
Confidence            432  23311 322222          2211111       11234688888887 699999999999999999876553


Q ss_pred             ccccchhccCccchhhhcCCCCCceeEecccccccCCCc-----ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842          283 AAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-----CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF  357 (499)
Q Consensus       283 ~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-----~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  357 (499)
                      .-.-...++-|.      |-=+||....+.+.++ +|.|     .|++.+++.     .....|+.+.+...+..+...+
T Consensus       283 tDLLaLtiLrpP------gefGaDIavGSsQRFG-VPlGYGGPHAaFfAv~~~-----l~R~mPGRiiGvtkD~~gk~a~  350 (1001)
T KOG2040|consen  283 TDLLALTILRPP------GEFGADIAVGSSQRFG-VPLGYGGPHAAFFAVSES-----LVRMMPGRIIGVTKDALGKEAY  350 (1001)
T ss_pred             ehhhHHHccCCh------hhcCceeeeccccccC-ccccCCCchHHHHHHHHH-----HHhhCCCceEeeeecccccHHH
Confidence            222111111111      1114999999998865 4544     455555432     2234455554443322222111


Q ss_pred             C---CcccCCCCCC-------CcHHHHHHHH-----HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEE
Q 010842          358 K---DWQVGTGRRF-------KSLRLWMVLR-----SYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCF  422 (499)
Q Consensus       358 ~---~~~~~~sr~~-------~al~~~~~l~-----~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f  422 (499)
                      +   +-.-|..||-       .|.++.+.+.     +.|.+|++++.++....+..|...|+.. +-++...+.+-.+.+
T Consensus       351 RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~~k~fFDTLkI  429 (1001)
T KOG2040|consen  351 RLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQHKPFFDTLKI  429 (1001)
T ss_pred             HHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhccccccceEEE
Confidence            1   0001112221       2333333332     2499999999999999999999999986 678887887777777


Q ss_pred             EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          423 RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      ++...           .+++.++..++++-+-   .+ ..+.+-+++ -..++++|+|.++..+.+
T Consensus       430 ~~~~s-----------~~~~l~rA~~~~iNlr---~~-ed~tigvsl-DETv~~~DvddLl~vf~~  479 (1001)
T KOG2040|consen  430 RCGCS-----------AEEVLDRAAKRQINLR---LV-EDGTIGVSL-DETVTEKDVDDLLWVFNE  479 (1001)
T ss_pred             EecCc-----------HHHHHHHHHhhcCceE---Ee-ecCceEEee-cccccHHHHHHHHHHHcc
Confidence            77542           3455555555553221   11 123366677 488999999999998853

>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases

Probab=98.77  E-value=4e-06  Score=81.19  Aligned_cols=303  Identities=13%  Similarity=0.104  Sum_probs=158.3

Q ss_pred             HHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh----hhccCCeEEEcCCCCchhHHHHHHHhCC
Q 010842          135 MDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG----AENMHKLVVYGSDQTHSTFAKVCKLAGV  210 (499)
Q Consensus       135 ~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~----~~g~~~~~i~~s~~~H~s~~ka~~~~G~  210 (499)
                      ++.+++++|.+.+.        ++..|-|.=|++--..++.....-.+    +...++...+|+.+.+-.....++.+|+
T Consensus        75 r~l~a~llgv~~~~--------viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~Gi  146 (425)
T PF12897_consen   75 RELFAELLGVPPEN--------VIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFGI  146 (425)
T ss_dssp             HHHHHHHHTS-GGG--------EEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT-
T ss_pred             HHHHHHHhCCCHHH--------EEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhCc
Confidence            44599999998764        55554444344433333332222111    1123577899999999999999999999


Q ss_pred             CCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHH-HHHhCCEEEeecccc
Q 010842          211 SPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEV-ANEYGIWVHVDAAYA  286 (499)
Q Consensus       211 g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~i-a~~~~~~lhvD~A~g  286 (499)
                         +.+.||.+++|   .|+|.+|+.+.++..-   --+-++---+||+|..-.   +++++.+ +.+.++.+.-|-||+
T Consensus       147 ---emi~VpM~~dG---PDmD~Ve~LV~~D~sv---KGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~  217 (425)
T PF12897_consen  147 ---EMIPVPMTEDG---PDMDMVEELVAEDPSV---KGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYA  217 (425)
T ss_dssp             ---EEEEEEEETTE---E-HHHHHHHTHTSTTE---EEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTT
T ss_pred             ---EEEecCCCCCC---CCHHHHHHHHhcCCcc---ceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCce
Confidence               99999999875   8999999999765431   113444455789999944   4555554 346799999999998


Q ss_pred             chhccCc--cch--hhh-----cCCCCCceeEecccccccCCCcceEEEEeCch--hHHHhhcCCccCCCCCCCCCCCcc
Q 010842          287 GSACICP--EFR--HYL-----NGIERVDSFSFSPHKWLLSYLDCCCLWVKQPG--LLVKALSTDPEYLKNKPSESNSVV  355 (499)
Q Consensus       287 ~~~~~~~--~~~--~~~-----~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~--~l~~~~~~~~~yl~~~~~~~~~~~  355 (499)
                      ...+..+  ...  ..+     .|-..--.+-.|..|.-+...|.+++......  .+.+.++..  -+           
T Consensus       218 vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~--tI-----------  284 (425)
T PF12897_consen  218 VHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQ--TI-----------  284 (425)
T ss_dssp             T-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH---S-----------
T ss_pred             EeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcCc--ee-----------
Confidence            8766322  111  111     23222335566788887766666766654432  111111110  00           


Q ss_pred             cCCCcccCCCCCCCcHHHHHHHHHhc-HH-HHHHHHHHHHHH--------HHHHHHHHh-cCCCeEEEcCCC-ceEEEEE
Q 010842          356 DFKDWQVGTGRRFKSLRLWMVLRSYG-VL-NLQSHIRSDIRL--------AKMFEGFVK-SDPRFEIVVPRH-FALVCFR  423 (499)
Q Consensus       356 ~~~~~~~~~sr~~~al~~~~~l~~~g-~~-g~~~~~~~~~~~--------a~~l~~~L~-~~~~~~~~~~~~-~~~v~f~  423 (499)
                                 ..+-+......+.++ .+ |+++.++++.+.        -+.|.+.|. .. ++--+..|. ...|+|.
T Consensus       285 -----------gpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~-~ia~Wt~P~GGYFIsld  352 (425)
T PF12897_consen  285 -----------GPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGL-GIASWTKPKGGYFISLD  352 (425)
T ss_dssp             --------------HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGG-TSEEE---SBSS-EEEE
T ss_pred             -----------CccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCC-CeeEecCCCCceEEEEe
Confidence                       112244444555553 35 777777666653        344555665 32 444455554 4567777


Q ss_pred             ecCCCCCCcchhHHHHHHHHHHHHhcCCEEEE-eeeE--C---CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          424 LNPYPHSGSADTEMLNRKLLDWVNSTGRVYLT-HTIV--G---GLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~--~---g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      ..+..          .+++.+...+.|+.+.. +..+  +   ....||++.+  +-+.+|++..++.+.-+++
T Consensus       353 ~~~G~----------AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS--~P~leel~~Am~~~~~cv~  414 (425)
T PF12897_consen  353 VLDGT----------AKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPS--YPSLEELETAMDVFATCVK  414 (425)
T ss_dssp             ESTT-----------HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--S--SS-HHHHHHHHHHHHHHHH
T ss_pred             cCCCh----------HHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCC--CCCHHHHHHHHHHHHHHHH
Confidence            65532          67888888888965443 2222  1   1356999985  3578999999998876554

; PDB: 3D6K_C 3EZ1_A 3PPL_B.

>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]

Probab=98.77  E-value=4.4e-06  Score=78.65  Aligned_cols=297  Identities=15%  Similarity=0.192  Sum_probs=161.7

Q ss_pred             HHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccC--CeEE-EcCCCCchhHHHH-------
Q 010842          135 MDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMH--KLVV-YGSDQTHSTFAKV-------  204 (499)
Q Consensus       135 ~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~--~~~i-~~s~~~H~s~~ka-------  204 (499)
                      .+.+.++||++.-         +-+++|.||+-+|+..||.+....   ++++  +..| .+-..-|-...-+       
T Consensus       107 ~~~vt~lf~~~kv---------lpmnTGaEa~Eta~KLaR~wgy~~---K~ip~nka~il~~~~nFhGrT~~ais~s~d~  174 (427)
T KOG1402|consen  107 AEYVTKLFGYDKV---------LPMNTGAEAVETACKLARKWGYRK---KNIPKNKAKILSAENNFHGRTLGAISLSTDP  174 (427)
T ss_pred             HHHHHHhcCccee---------eecccchhHHHHHHHHHHHHHHhh---ccCCccceeEEEecccccCceeeeEEecCCc
Confidence            3458999999764         557788999999999999764432   1333  1122 2222223211111       


Q ss_pred             HHHhCCCCC---CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc--CC--hhHHHHHHHHhCC
Q 010842          205 CKLAGVSPA---NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV--DN--VEPLAEVANEYGI  277 (499)
Q Consensus       205 ~~~~G~g~~---~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i--d~--l~~I~~ia~~~~~  277 (499)
                      -...|.|.-   .+..||.+       |.++|+.++++..   ..-|+|=-..|  .-|.+  +|  |++..++|.+|++
T Consensus       175 ds~~~fgp~~P~~~~~v~Y~-------d~eale~~l~~~~---vaaFivEPIQG--EaGVvvP~~GYL~~vreLCtkynv  242 (427)
T KOG1402|consen  175 DSWDGFGPFLPGVVDKVPYG-------DAEALEVALKSPN---VAAFIVEPIQG--EAGVVVPPPGYLKKVRELCTKYNV  242 (427)
T ss_pred             chhhccCCCCCCcceeeccC-------CHHHHHHHhcCCC---eeEEEeecccc--ccceEeCCchhHHHHHHHHHhhcE
Confidence            112334321   24555543       7899999987621   12233333333  45766  33  8999999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccC-CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLS-YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      .++.|..+.|......-+..-...+ +-|.+.+  -|.+.+ -+..+.++..+.-.+    ...|.-             
T Consensus       243 l~I~DEvQTGl~RTGk~la~d~env-~PDivil--gKalSGG~~Pvsavl~~~~im~----~~~pge-------------  302 (427)
T KOG1402|consen  243 LLIADEVQTGLARTGKLLACDYENV-RPDIVIL--GKALSGGVYPVSAVLADDDIML----NIKPGE-------------  302 (427)
T ss_pred             EEEehhhhhcccccCcEEEeehhhc-CCCeEEE--eccccCCeeeeEEEEecHHHHh----ccCCCc-------------
Confidence            9999999877543211110000111 2566655  355532 355666665443221    111110             


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-e-EEEc--CCCceEEEEEecCCCCCCc
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR-F-EIVV--PRHFALVCFRLNPYPHSGS  432 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~-~-~~~~--~~~~~~v~f~~~~~~~~~~  432 (499)
                         +  ..+.....|..-.++..+..---+++.+++..+-..|+.+|.+++. + .++.  .-..-+..+.+.+...   
T Consensus       303 ---H--gsTyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~---  374 (427)
T KOG1402|consen  303 ---H--GSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKT---  374 (427)
T ss_pred             ---c--ccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccc---
Confidence               0  0111123455555555554444467788889999999999988653 2 0111  1122223333333210   


Q ss_pred             chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          433 ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       433 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                        .....-.++-.+.+.|.  +.-+.. + ..+|++.- ...+++|+++-+++|.+..
T Consensus       375 --~~~~aw~~cl~lk~~g~--LAkptH-~-~IiRfaPP-L~I~e~dl~eg~e~i~k~i  425 (427)
T KOG1402|consen  375 --SGQDAWDVCLALKENGL--LAKPTH-G-NIIRFAPP-LVISEEDLREGIEAIEKTI  425 (427)
T ss_pred             --cchhHHHHHHccccccc--ccCCCC-C-CeEEecCC-cccCHHHHHHHHHHHHHHh
Confidence              11223345556666773  322222 2 37999883 6679999999999998864

>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue

Probab=98.74  E-value=4.3e-06  Score=83.25  Aligned_cols=189  Identities=15%  Similarity=0.059  Sum_probs=109.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      +....++.++|.++++-...       ...+++|||+|+-.|+..||...... ...+ +..++-.....|-...-+..+
T Consensus        58 ~~~~~~la~~L~~~~p~~~~-------~v~f~~sGseAve~Alkla~~~~~~~-~~~~-r~~il~~~~~yHG~t~~~~s~  128 (339)
T PF00202_consen   58 HPEAAELAEKLAELFPGGLD-------RVFFANSGSEAVEAALKLARQYHNKR-AYTG-RRKILAFEGSYHGRTLGALSL  128 (339)
T ss_dssp             EHHHHHHHHHHHHHSSTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT-HHHT-TTEEEEETTTB-TSSHHHHHH
T ss_pred             ccchhhhhhhhhhccccccc-------eeeeccCchHHHHHHHHHhhcccccc-cccC-CceEEEeeeeeeccCcccccc
Confidence            44455566778888833222       35899999999999999999221110 0001 233333344456544434333


Q ss_pred             hC---------CCCCCeEEeeCCCCCC---CccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc----CChhHHHHH
Q 010842          208 AG---------VSPANIRALPTSVDAN---FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV----DNVEPLAEV  271 (499)
Q Consensus       208 ~G---------~g~~~v~~v~~~~~~~---~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i----d~l~~I~~i  271 (499)
                      .+         -....+..+|.+....   ..-..+++++.+.+...  ....+|++--.....|.+    +=+++|.++
T Consensus       129 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~iaavivEPi~g~~G~~~~~~~~l~~l~~l  206 (339)
T PF00202_consen  129 TGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNA--DEIAAVIVEPIQGEGGMIPPPPEYLRELREL  206 (339)
T ss_dssp             SSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHG--GGEEEEEEESSBTTTTSBEE-TTHHHHHHHH
T ss_pred             cCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcC--CcEEEEEEeccccccCccccccchhhehccc
Confidence            22         1112567777652110   00112224444443322  234455555555555655    227999999


Q ss_pred             HHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCc
Q 010842          272 ANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQP  330 (499)
Q Consensus       272 a~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~  330 (499)
                      |++||+.+++|..+.|+.....-+.....++. .|.+++.  |.++..+..|.++++++
T Consensus       207 c~~~gillI~DEV~tG~gRtG~~~a~~~~gv~-PDiv~~g--K~l~gG~p~sav~~~~~  262 (339)
T PF00202_consen  207 CREHGILLIADEVQTGFGRTGKFFASEHYGVD-PDIVTFG--KGLGGGLPISAVLGSEE  262 (339)
T ss_dssp             HHHTT-EEEEEETTTTTTTTSSSSGHHHHTSS-SSEEEEE--GGGGTTSSEEEEEEEHH
T ss_pred             ccccccceecccccccccccCCccceeccccc-Ccccccc--cchhhhhhcccccccch
Confidence            99999999999999887544333333334553 7999996  99877788999998874

On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....

>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor

Probab=98.50  E-value=1.3e-07  Score=91.87  Aligned_cols=161  Identities=17%  Similarity=0.142  Sum_probs=38.1

Q ss_pred             HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC------chhHHHHHHH
Q 010842          134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT------HSTFAKVCKL  207 (499)
Q Consensus       134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~------H~s~~ka~~~  207 (499)
                      +.+.+++++|....         +++++...|++.++.+...            +-.|++|...      .+.+...++.
T Consensus        52 v~~ll~~ltgAeaA---------~VvNnnaAAv~L~l~~la~------------~~EvIvsRGelVeiGgsFRip~vm~~  110 (367)
T PF03841_consen   52 VEELLCELTGAEAA---------LVVNNNAAAVLLALNTLAK------------GKEVIVSRGELVEIGGSFRIPDVMRQ  110 (367)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccccccccccc---------ccccccccccccccccccc------------cccccccccccccccccccccccccc
Confidence            44558888988765         7777766777766654321            1134445433      3346667777


Q ss_pred             hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc--cccc--CChhHHHHHHHHhCCEEEeec
Q 010842          208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS--TTAV--DNVEPLAEVANEYGIWVHVDA  283 (499)
Q Consensus       208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~--~G~i--d~l~~I~~ia~~~~~~lhvD~  283 (499)
                      .|.   .++.|-+.  +  +..+++.+++|.++|+      ++.-.+.+|.  .|..  -+++++++++|+|++++++|.
T Consensus       111 sGa---~lvEVGtt--N--~t~~~Dye~AI~e~Ta------~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~Dl  177 (367)
T PF03841_consen  111 SGA---RLVEVGTT--N--RTHLSDYEKAITENTA------ALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDL  177 (367)
T ss_dssp             ---------------------------------------------------------------HHHHHHHHHT--EEEE-
T ss_pred             ccc---cccccccc--c--cccccccccccccccc------ccccccccccccccccccccHHHHHHHHhhcCCcEEEEC
Confidence            888   88888764  2  6789999999999987      5666665554  2222  479999999999999999997


Q ss_pred             cccchhccCccc----hhhhc-CC-CCCceeEecccccccCCCcceEEEEeCc
Q 010842          284 AYAGSACICPEF----RHYLN-GI-ERVDSFSFSPHKWLLSYLDCCCLWVKQP  330 (499)
Q Consensus       284 A~g~~~~~~~~~----~~~~~-g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~  330 (499)
                      +-|...-+ ..+    .+.+. -+ .++|.++||+.|.+++|- +|+++-|..
T Consensus       178 gsG~l~dl-~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gkk~  228 (367)
T PF03841_consen  178 GSGLLVDL-SPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIVGKKE  228 (367)
T ss_dssp             TTHHHHHH-HTT----------CCCCT-SEEEEETTSSSSS-S--EEEEEEHH
T ss_pred             CCCCCcCc-ccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEEeCHH
Confidence            65443211 111    11111 11 359999999999999985 788887764

3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.

>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]

Probab=98.25  E-value=0.00023  Score=66.01  Aligned_cols=343  Identities=13%  Similarity=0.034  Sum_probs=185.7

Q ss_pred             cCCCCCCh-HHHHHHHHHHHcccCCcccc------cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH
Q 010842           95 FFPATVST-AGFLGEMLCACFNSVGFNWL------ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL  167 (499)
Q Consensus        95 ~~~~~~~~-~~~~~~~l~~~~n~~~~~~~------~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~  167 (499)
                      |-+++... .+++-++-...+|-++...+      .+.-...+-......+.+|+..|+++.     --++.+|||.- +
T Consensus        11 FaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~-----vlf~QGGGt~q-F   84 (370)
T KOG2790|consen   11 FAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYK-----VLFLQGGGTGQ-F   84 (370)
T ss_pred             cCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCcee-----EEEEeCCCccc-c
Confidence            33444333 35566666677765543322      133455666667888999999998851     23456677732 2


Q ss_pred             HHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCC-ccCHHHHHHHHHHHHHcCCc
Q 010842          168 VTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANF-SLSPQLLRRAVEADVEAGLV  246 (499)
Q Consensus       168 ~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~-~~d~~~L~~~i~~~~~~g~~  246 (499)
                      .|+..-.-.     .++|..-.-|++..=+-.+.++|-++.-.   +.+..+..+...+ -.|.+.++-..+  .     
T Consensus        85 aAv~lNL~g-----lK~g~~AdYiVTGsWS~KA~~EAkk~~~~---~~V~~~~k~y~ygkvPd~~~w~~~~d--a-----  149 (370)
T KOG2790|consen   85 AAVPLNLIG-----LKHGRCADYVVTGSWSAKAAEEAKKYGTP---NIVIPKLKSYTYGKVPDPSTWELNPD--A-----  149 (370)
T ss_pred             cccchhhhc-----cccCCccceEEeccccHHHHHHHHhhCCc---eEEeccccccccCcCCChhhcccCCC--c-----
Confidence            222111000     01122223455543333445555544333   3444333211100 134444433211  1     


Q ss_pred             cEEEEEecCCCcccccCC-hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEE
Q 010842          247 PLFLCATVGTTSTTAVDN-VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCL  325 (499)
Q Consensus       247 p~~vv~t~gtt~~G~id~-l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l  325 (499)
                       -+|..+...|..|.--| +.    +-.-+|..++.|-.-   -++     .+--++...+.|...++|..+ |.|..++
T Consensus       150 -~yvyyCaNETVHGVEf~~~P----~~~~~~~vlVaDmSS---nfl-----SrpvDvsk~gvi~aGAQKN~G-~aG~Tvv  215 (370)
T KOG2790|consen  150 -SYVYYCANETVHGVEFDFIP----VNDPKGAVLVADMSS---NFL-----SRPVDVSKFGVIFAGAQKNVG-PAGVTVV  215 (370)
T ss_pred             -cEEEEecCceeeceecCCCC----CCCCCCceEEEeccc---chh-----cCCccchhcceEEeccccccC-ccccEEE
Confidence             27888888899998633 33    223467888888432   111     112234457789999999987 6788888


Q ss_pred             EEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC-CCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHH
Q 010842          326 WVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR-FKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFV  403 (499)
Q Consensus       326 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L  403 (499)
                      ++|+.- +.+.....|.-+.-....       .+.++-.+.+ |..-..-+.++.+ ...|++++-+...+.++.+++.|
T Consensus       216 ivr~dl-lg~~~~~tP~v~dyk~~~-------~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~i  287 (370)
T KOG2790|consen  216 IVRKDL-LGNALDITPSVLDYKIMD-------KNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAI  287 (370)
T ss_pred             EEehhh-hcccccCCccccceeeec-------cccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence            888742 333333333322211100       0111111211 1111122233332 23567777778889999999999


Q ss_pred             hcCCCeEEE-cCC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHH
Q 010842          404 KSDPRFEIV-VPR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHV  479 (499)
Q Consensus       404 ~~~~~~~~~-~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di  479 (499)
                      .+..||-.. .+|   .-..|+||+.+         +++-.++++...+++.+-+.+  .+..+.+|.|+- -..+-+++
T Consensus       288 D~s~gfy~cpVe~~~RS~MNV~Fri~~---------d~Le~eFLkeA~~~~mv~LKG--hRSVGGiRASlY-NAisv~~~  355 (370)
T KOG2790|consen  288 DNSNGFYRCPVEPSVRSRMNVPFRIEK---------DELEAEFLKEAAKEHMVQLKG--HRSVGGIRASLY-NAISVEEV  355 (370)
T ss_pred             HhcCCeEEcccchhhhhhcccceeecc---------hHHHHHHHHHHHHhhhhcccc--ccccccchhhhh-ccccHHHH
Confidence            998787544 233   23458899975         345566666666666332222  234456999985 45789999


Q ss_pred             HHHHHHHHHHHHH
Q 010842          480 VAAWELIMEGADR  492 (499)
Q Consensus       480 ~~l~~~l~~~~~~  492 (499)
                      +.+++-++++.+.
T Consensus       356 q~L~~~m~~F~k~  368 (370)
T KOG2790|consen  356 QKLAAFMKEFQKK  368 (370)
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999988764

>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria []

Probab=98.19  E-value=0.00028  Score=68.28  Aligned_cols=169  Identities=13%  Similarity=0.164  Sum_probs=98.4

Q ss_pred             hhHHHHHHHHHHHHHHcCCCCccccCCCccEEE---cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEE-cCCCCchhH
Q 010842          126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVI---QNTTSDSILVTLIAARDRALDAVGAENMHKLVVY-GSDQTHSTF  201 (499)
Q Consensus       126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~---t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~-~s~~~H~s~  201 (499)
                      +-..+|+.    +++.||.+..         ++   ..+||.|+-++|.....           |++.++ ++...+-.+
T Consensus        55 GRd~le~i----yA~vfgaE~A---------LVRpq~vSGTHAi~~~Lfg~Lr-----------pGD~ll~~tG~PYDTL  110 (403)
T PF06838_consen   55 GRDKLERI----YADVFGAEDA---------LVRPQFVSGTHAIALALFGVLR-----------PGDELLSITGKPYDTL  110 (403)
T ss_dssp             HHHHHHHH----HHHHCT-SEE---------EEETTS-SHHHHHHHHHHHH-------------TT-EEEESSSS--CCH
T ss_pred             cHHHHHHH----HHHHhCchhh---------hhcccccchHHHHHHHHHhcCC-----------CCCeEEEcCCCchhhH
Confidence            34556665    8999998764         22   34789998888877654           555544 565667778


Q ss_pred             HHHHHHhCCCCC-------CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEec--CC--CcccccCChhHHHH
Q 010842          202 AKVCKLAGVSPA-------NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATV--GT--TSTTAVDNVEPLAE  270 (499)
Q Consensus       202 ~ka~~~~G~g~~-------~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~--gt--t~~G~id~l~~I~~  270 (499)
                      .+.+.+-|-+..       +...||..++|  .+|.+.++++|+++++      +|...-  |.  -+.=.+++|+++.+
T Consensus       111 ~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~dg--~~D~~~i~~~~~~~tk------~v~IQRSrGYs~R~sl~i~~I~~~i~  182 (403)
T PF06838_consen  111 EEVIGIRGNGPGSLKEFGIKYREVPLTEDG--TIDWEAIKKALKPNTK------MVLIQRSRGYSWRPSLTIEEIKEIIK  182 (403)
T ss_dssp             HHHHTSSSSSSSSTGGGT-EEEE--B-TTS--SB-HHHHHHHHHTTEE------EEEEE-S-TTSSS----HHHHHHHHH
T ss_pred             HHHhCCCCCCCCChHHhCceeEEEeecCCC--CcCHHHHHHhhccCce------EEEEecCCCCCCCCCCCHHHHHHHHH
Confidence            877654332111       56778888766  9999999999997665      343332  21  12334477888888


Q ss_pred             HHHHh--CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchh
Q 010842          271 VANEY--GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGL  332 (499)
Q Consensus       271 ia~~~--~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~  332 (499)
                      ++|+.  ++++.||-|||-+.=.   ..+.-.   +||.+..|.-|..+.. ..+|..++-+++.
T Consensus       183 ~vk~~~p~~iifVDNCYGEFvE~---~EP~~v---GADl~aGSLIKNpGGgiAptGGYIaGr~~l  241 (403)
T PF06838_consen  183 FVKEINPDVIIFVDNCYGEFVET---QEPTEV---GADLMAGSLIKNPGGGIAPTGGYIAGRKDL  241 (403)
T ss_dssp             HHHHH-TTSEEEEE-TTTTTTSS---S-GGGG---T-SEEEEETTSGGGTTT-SS-EEEEESHHH
T ss_pred             HHHhhCCCeEEEEeCCcceeccc---cCcccc---chhheeccceeCCCCCccCcCCEEechHHH
Confidence            88775  6899999999887422   122222   4999999999997543 2344444444443

; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.

>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]

Probab=97.53  E-value=0.022  Score=53.54  Aligned_cols=301  Identities=13%  Similarity=0.071  Sum_probs=158.8

Q ss_pred             EEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh------CCCCCC---eEEeeCCC--CC
Q 010842          156 GVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA------GVSPAN---IRALPTSV--DA  224 (499)
Q Consensus       156 g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~------G~g~~~---v~~v~~~~--~~  224 (499)
                      .+|+++|||||-+||+.||+...        ...+|.+....|--+...+++.      |-|...   |+.-|+.+  .|
T Consensus       105 c~F~NSGSEANDLALRLAR~ftk--------hqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrG  176 (452)
T KOG1403|consen  105 CFFVNSGSEANDLALRLARNFTK--------HQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRG  176 (452)
T ss_pred             EEEecCCchhhHHHHHHHHhhcc--------cCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCcccccc
Confidence            48999999999999999998642        2445555444443333322221      222222   33334321  11


Q ss_pred             CCc-----------cCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEEeeccccchh
Q 010842          225 NFS-----------LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSA  289 (499)
Q Consensus       225 ~~~-----------~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~  289 (499)
                      .|+           .-.+.+++.+++....|....+.++-.-.+--|.|-|    ++++++..+.+|-.++.|..+-|+.
T Consensus       177 K~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFG  256 (452)
T KOG1403|consen  177 KFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFG  256 (452)
T ss_pred             ccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhccc
Confidence            121           2345677777766666654444444444444565533    6888999999999999999987765


Q ss_pred             ccCccc-hhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842          290 CICPEF-RHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGRR  367 (499)
Q Consensus       290 ~~~~~~-~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~  367 (499)
                      .....+ .....++ --|.+++  -|-++-....+++..+.+  +.++|.. ...|+..-                +|.+
T Consensus       257 RvG~hyWafq~y~f-iPDIVtm--gKpmGNGhPVa~Vattke--IA~Af~atgv~YFNTy----------------GGnP  315 (452)
T KOG1403|consen  257 RVGSHYWAFQTYNF-IPDIVTM--GKPMGNGHPVAAVATTKE--IAQAFHATGVEYFNTY----------------GGNP  315 (452)
T ss_pred             ccchhhhhhhhhcc-ccchhee--cccCCCCCeeeEEeccHH--HHHHhccccceehhcc----------------CCCc
Confidence            443222 1222221 1455554  244443444666666553  3355544 45555432                2333


Q ss_pred             CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEEcCCCc-e-EEEEEecCCCCCCcchhHHHHHHHHH
Q 010842          368 FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIVVPRHF-A-LVCFRLNPYPHSGSADTEMLNRKLLD  444 (499)
Q Consensus       368 ~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~~~~~~-~-~v~f~~~~~~~~~~~~~~~~~~~l~~  444 (499)
                      .......+.|+....+.   +.++..+..++|...|+++. ..+++++.+. + .+.+.+..+. .+..........+..
T Consensus       316 VsCAv~laVm~v~e~E~---Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~-~tRtP~tk~A~~~v~  391 (452)
T KOG1403|consen  316 VSCAVGLAVMRVCEDEN---LQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDR-KTRTPDTKEAHWVVN  391 (452)
T ss_pred             hhHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeeccc-ccCCCcHHHHHHHHH
Confidence            33333344555544444   44556666777777666532 2455554331 1 1222222211 011111334566777


Q ss_pred             HHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          445 WVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       445 ~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      +|.+...+.++... -+++.+++-.- ---+++++++++..|.++..
T Consensus       392 rlke~y~VLlsaDG-Ph~NilKiKPP-mCFneena~e~v~~ld~iLT  436 (452)
T KOG1403|consen  392 RLKELYRVLLSADG-PHRNILKIKPP-MCFNEENADEFVLGLDEILT  436 (452)
T ss_pred             HHHHhhhEEEecCC-CCCceeecCCC-cccChhhHHHHHHHHHHHHH
Confidence            88777766665322 13456766431 11367788888888877664

>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]

Probab=97.48  E-value=0.013  Score=55.38  Aligned_cols=285  Identities=15%  Similarity=0.160  Sum_probs=162.5

Q ss_pred             ccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHH
Q 010842          154 GGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLL  233 (499)
Q Consensus       154 ~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L  233 (499)
                      ..|+-+-|||-|+..+..-.-...         .+-.||+|.++.......+.-.|+-  .+...|.=..++-.+|++.+
T Consensus       100 v~~vQslsGTGAl~~~A~Fl~~~~---------~~~~VY~SnPTW~nH~~if~~aGf~--tv~~Y~yWd~~~k~~d~e~~  168 (410)
T KOG1412|consen  100 VFGVQSLSGTGALRIAADFLATFY---------NKNTVYVSNPTWENHHAIFEKAGFT--TVATYPYWDAENKCVDLEGF  168 (410)
T ss_pred             ccceeeccccchhhhhHHHHHHhc---------ccceeEecCCchhHHHHHHHHcCCc--eeeeeeeecCCCceecHHHH
Confidence            356777888888776644322111         3446999999988888888888851  34444432222347888888


Q ss_pred             HHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccCccch-----hhh-cCCC
Q 010842          234 RRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFR-----HYL-NGIE  303 (499)
Q Consensus       234 ~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~-----~~~-~g~~  303 (499)
                      -..|+.... +  -.+|+..+..||||. ||    ..+|+++.++.++.-..|-||-|++.--+...     ... .|++
T Consensus       169 Lsdl~~APe-~--si~iLhaCAhNPTGm-DPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e  244 (410)
T KOG1412|consen  169 LSDLESAPE-G--SIIILHACAHNPTGM-DPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFE  244 (410)
T ss_pred             HHHHhhCCC-C--cEEeeeccccCCCCC-CCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCe
Confidence            877766432 1  123334444788885 55    46789999999999999999988764332211     111 2221


Q ss_pred             CCceeEecccccccC--C-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC--CCcHHHHHHHH
Q 010842          304 RVDSFSFSPHKWLLS--Y-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR--FKSLRLWMVLR  378 (499)
Q Consensus       304 ~aDsi~~~~hK~l~~--p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~--~~al~~~~~l~  378 (499)
                        =+++-++-|.++.  + .||--+.++++.......+...--++...                +.+  ++|--+...|.
T Consensus       245 --~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~----------------SNPPAyGArIV~kvL~  306 (410)
T KOG1412|consen  245 --LFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNW----------------SNPPAYGARIVHKVLS  306 (410)
T ss_pred             --EEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhcc----------------CCCcchhhHHHHHHhc
Confidence              2567778887753  2 34444566776544333222211111110                111  01111111111


Q ss_pred             -----HhcHHHHHHHHHHHHHHHHHHHHHHhcC--CC-eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcC
Q 010842          379 -----SYGVLNLQSHIRSDIRLAKMFEGFVKSD--PR-FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTG  450 (499)
Q Consensus       379 -----~~g~~g~~~~~~~~~~~a~~l~~~L~~~--~~-~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g  450 (499)
                           .-=...++.+..|..+++..|++.|..+  || |.-+ -.+.++++|  .+.           +..-++.|.++.
T Consensus       307 tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI-~~QiGMFSy--TGL-----------tp~qV~~li~~h  372 (410)
T KOG1412|consen  307 TPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHI-TQQIGMFSY--TGL-----------TPAQVDHLIENH  372 (410)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH-Hhhccceee--cCC-----------CHHHHHHHHHhc
Confidence                 1112446677788888999999998865  33 2111 123444444  332           334567787778


Q ss_pred             CEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          451 RVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       451 ~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      .+|+...   |    |++++.  .....++++..+|.+..+.+.
T Consensus       373 ~vyLl~~---G----RInisG--LN~~NveyVAkAIde~Vr~~~  407 (410)
T KOG1412|consen  373 KVYLLSD---G----RINISG--LNMKNVEYVAKAIDETVRAIK  407 (410)
T ss_pred             eEEEecC---C----cEeeec--cccccHHHHHHHHHHHHHhhc
Confidence            7776543   1    666642  344678999999988887654

>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]

Probab=97.19  E-value=0.022  Score=54.78  Aligned_cols=221  Identities=13%  Similarity=0.086  Sum_probs=120.1

Q ss_pred             CHHHHHHHHHHHHHcCCccEEEEEec----CCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCC-
Q 010842          229 SPQLLRRAVEADVEAGLVPLFLCATV----GTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE-  303 (499)
Q Consensus       229 d~~~L~~~i~~~~~~g~~p~~vv~t~----gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-  303 (499)
                      .++++|+.|.+-.++......+++--    |--..++-+=+..+.+||++||+-++||.++-|+.....-+.+-..+++ 
T Consensus       254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~  333 (484)
T KOG1405|consen  254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS  333 (484)
T ss_pred             HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence            46778888877665443333444332    2223455566899999999999999999998776544433433333332 


Q ss_pred             CCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHH
Q 010842          304 RVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVL  383 (499)
Q Consensus       304 ~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~  383 (499)
                      -.|.+||+- |+..    .|++  .+.+     |....+|              +.+..-+|-+++.+-+-..++.+..+
T Consensus       334 PpD~vTFSK-K~q~----gGff--h~~~-----frpn~pY--------------rifNTWmGdP~k~lll~~vv~~I~~~  387 (484)
T KOG1405|consen  334 PPDVVTFSK-KFQT----GGFF--HDEE-----FRPNEPY--------------RIFNTWMGDPSKNLLLEEVVQEIKRE  387 (484)
T ss_pred             Cccceehhh-hhhc----Cccc--cCcc-----cCCCchH--------------HHhhhhcCChHHHHHHHHHHHHHhHH
Confidence            278888763 4332    2222  1211     1111122              11112234444455554555554444


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE
Q 010842          384 NLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV  459 (499)
Q Consensus       384 g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~  459 (499)
                      +   +++......++|...|.+    .|+.---..-+...+.+.+..         .....+++..+..+|.. +++.  
T Consensus       388 ~---Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps---------~~~Rdk~i~~~~~nGv~-~GGC--  452 (484)
T KOG1405|consen  388 D---LLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPS---------GSIRDKLILIARLNGVN-LGGC--  452 (484)
T ss_pred             H---HHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCC---------hHHHHHHHHHHHHcCce-eccc--
Confidence            3   445555556666666554    343210001233444555543         34456777777778843 2332  


Q ss_pred             CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          460 GGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       460 ~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                       |...+|+-.+ ..-++.+.+-+++.+.++.+.
T Consensus       453 -g~~siRfRPs-Lvf~~~Ha~i~l~~~~k~l~~  483 (484)
T KOG1405|consen  453 -GDKSIRFRPS-LVFRKHHADIFLDIFDKILAG  483 (484)
T ss_pred             -ccceeeeccc-eeehhhhHHHHHHHHHHHhcc
Confidence             3334666553 446788899999999887654

>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]

Probab=96.89  E-value=0.02  Score=53.89  Aligned_cols=154  Identities=18%  Similarity=0.171  Sum_probs=96.6

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeE-EEcCCCCchhHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLV-VYGSDQTHSTFAKVCK  206 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~-i~~s~~~H~s~~ka~~  206 (499)
                      ..||..    .++.||.+....     . .-.-+||.|+-+||.-..+           |++. +++....+-.++....
T Consensus        68 dtLe~v----yA~vf~aE~a~V-----R-pq~isGTHAI~~aLfg~LR-----------pgDell~i~G~PYDTLeevIG  126 (416)
T COG4100          68 DTLERV----YAQVFGAEAALV-----R-PQIISGTHAIACALFGILR-----------PGDELLYITGSPYDTLEEVIG  126 (416)
T ss_pred             hHHHHH----HHHHhcccccee-----e-eeeecchhHHHHHHHhccC-----------CCCeEEEecCCcchhHHHHhc
Confidence            345555    788888865421     0 1223567777777664432           3433 4455555666666554


Q ss_pred             HhCCCCC-------CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCC-----CcccccCChhHHHHHHHH
Q 010842          207 LAGVSPA-------NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGT-----TSTTAVDNVEPLAEVANE  274 (499)
Q Consensus       207 ~~G~g~~-------~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gt-----t~~G~id~l~~I~~ia~~  274 (499)
                      +-|-|..       .-+.||...+|  .+|.+.++..+++.++       ++...-+     -+.=.+++|+++..+.|+
T Consensus       127 ~rg~~~gSL~dfgi~Y~~v~Lt~~g--kiD~~~v~~~i~~~tk-------li~IQRS~GY~~RpS~~I~eI~~~i~~vk~  197 (416)
T COG4100         127 LRGEGQGSLKDFGIKYKAVPLTADG--KIDIQAVKTAISDRTK-------LIGIQRSKGYAWRPSLSIAEIEEMITFVKE  197 (416)
T ss_pred             cCCCCcccHHHhCcceeecccccCC--cccHHHHHHhcCccce-------EEEEEeccCcCCCCcccHHHHHHHHHHHHh
Confidence            4332211       45678887766  9999999999998876       3333322     244456788888888887


Q ss_pred             h--CCEEEeeccccchhccCccchhhhcCCCCCceeEeccccccc
Q 010842          275 Y--GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLL  317 (499)
Q Consensus       275 ~--~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~  317 (499)
                      -  ++.+.||-|||-+.=   +..+.-.   +||.+..+.-|.-+
T Consensus       198 inpn~ivFVDNCYGEFvE---~~EPt~v---GaDliAGSLIKNpG  236 (416)
T COG4100         198 INPNVIVFVDNCYGEFVE---EKEPTHV---GADLIAGSLIKNPG  236 (416)
T ss_pred             cCCCEEEEEeccchhhhh---ccCcccc---chhhhccceeeCCC
Confidence            5  689999999988742   1111112   38888888888643

>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]

Probab=96.43  E-value=0.035  Score=53.35  Aligned_cols=260  Identities=15%  Similarity=0.152  Sum_probs=144.3

Q ss_pred             CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---C
Q 010842          187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---D  263 (499)
Q Consensus       187 ~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d  263 (499)
                      +.-.||+|.+++.-..+.-...|+   .+..+..-...+..+|.+.+-+.+.+.. .|  -++++--+..|+||.=   +
T Consensus       145 ~~~~I~ip~PTWgNh~~if~~ag~---~~~~yrYyd~~t~gld~~g~ledl~~~p-~g--s~ilLhaCaHNPTGvDPt~e  218 (427)
T KOG1411|consen  145 PSRDIYIPDPTWGNHKNIFKDAGL---PVKFYRYYDPKTRGLDFKGMLEDLGEAP-EG--SIILLHACAHNPTGVDPTKE  218 (427)
T ss_pred             cccceeecCCcccccCccccccCc---ceeeeeeccccccccchHHHHHHHhcCC-CC--cEEEeehhhcCCCCCCccHH
Confidence            455799999998777777778888   6655543322245788877666665432 12  2445555567888864   4


Q ss_pred             ChhHHHHHHHHhCCEEEeeccccchhccCc---cc--hhhh-cCCCCCceeEecccccccCC---CcceEEEEeCchhHH
Q 010842          264 NVEPLAEVANEYGIWVHVDAAYAGSACICP---EF--RHYL-NGIERVDSFSFSPHKWLLSY---LDCCCLWVKQPGLLV  334 (499)
Q Consensus       264 ~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~---~~--~~~~-~g~~~aDsi~~~~hK~l~~p---~~~g~l~~r~~~~l~  334 (499)
                      ..++|.++.++.+..-+.|.||-|++.-..   .+  |... .|  .--.++-+.-|.++.-   .|+=-+++++.+...
T Consensus       219 qw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g--~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~  296 (427)
T KOG1411|consen  219 QWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDG--HEILLAQSYAKNMGLYGERVGALSVVCKDADEAK  296 (427)
T ss_pred             HHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcC--CceEeehhhhhhcchhhhccceeEEEecCHHHHH
Confidence            467889999999999999999988764321   11  1111 11  1124566677776532   223234555554332


Q ss_pred             HhhcC-----CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-
Q 010842          335 KALST-----DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR-  408 (499)
Q Consensus       335 ~~~~~-----~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~-  408 (499)
                      +.-++     +|-|-....              .+.|-...+---..|+.-=...+..+.+|.+.+++.+.+.|++... 
T Consensus       297 rV~SQlk~liRpmYSnPP~--------------hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~  362 (427)
T KOG1411|consen  297 RVESQLKILIRPMYSNPPL--------------HGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSP  362 (427)
T ss_pred             HHHHHHHHHhcccccCCCc--------------cchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCC
Confidence            22221     333332211              1111110000000111111234566778889999999999987521 


Q ss_pred             --eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842          409 --FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI  486 (499)
Q Consensus       409 --~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l  486 (499)
                        |+-+ -.+.+.+||.-..             .+..+.|..+..+|++..       -|+|+.  ..+...+.++.++|
T Consensus       363 ~~W~hI-~~QIGMF~fTgl~-------------peQv~~l~ke~~iYmT~d-------GRiS~a--G~ss~nV~yLa~ai  419 (427)
T KOG1411|consen  363 GNWSHI-TKQIGMFCFTGLN-------------PEQVDWLTKEYHIYLTKD-------GRISMA--GLSSSNVPYLADAI  419 (427)
T ss_pred             ccHHHH-HHhhheeeecCCC-------------HHHHHHHHhhheeeeccC-------ceEeec--cccccCCcccchhh
Confidence              1111 1356778875432             334566666666676632       377774  24455688888888


Q ss_pred             HHHHH
Q 010842          487 MEGAD  491 (499)
Q Consensus       487 ~~~~~  491 (499)
                      .++.+
T Consensus       420 h~vtk  424 (427)
T KOG1411|consen  420 HAVTK  424 (427)
T ss_pred             HhHhc
Confidence            77654

>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species

Probab=96.14  E-value=0.17  Score=49.12  Aligned_cols=295  Identities=14%  Similarity=0.111  Sum_probs=134.4

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~  206 (499)
                      ..+||+++ +.|-++.|--...     +--++.+.|+.-++.|..-|.....    ....++..|+.+.+-++++.....
T Consensus        45 s~eL~~~I-r~LH~~VGNAvt~-----gr~IV~GtGsTQL~~AalyALSp~~----~~~~~p~~VVa~aPYY~~Y~~qt~  114 (363)
T PF04864_consen   45 SPELERQI-RRLHRVVGNAVTD-----GRYIVFGTGSTQLFNAALYALSPNA----SPSSSPASVVAAAPYYSSYPEQTD  114 (363)
T ss_dssp             -HHHHHHH-HHHHHHH-SB--T-----TSEEEEECHHHHHHHHHHHHHCHHT-----TTSSSEEEEE-SS--CHHHHHCC
T ss_pred             cHHHHHHH-HHHHHHhcccccc-----CcEEEEcCCHHHHHHHHHHhcCCCC----CCCCCCceeEecCCCccchHHHHH
Confidence            35677764 3466677753221     1124444444434555544443220    001145566666555555665555


Q ss_pred             HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842          207 LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA  286 (499)
Q Consensus       207 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g  286 (499)
                      .+.-   ......-|.. .|.          ..   ....+++=++|.|+||.|.+-.     .+++.-+..++-|-||-
T Consensus       115 ~f~s---~~y~w~Gda~-~~~----------~~---~~~~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYY  172 (363)
T PF04864_consen  115 FFDS---RLYKWAGDAS-NFK----------NS---DNPSPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYY  172 (363)
T ss_dssp             CT-B---TTEEEEEECC-CGT----------T----S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-
T ss_pred             hccc---cCccccccHH-hhc----------cC---CCCCCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeee
Confidence            5544   3344443332 122          11   1134678899999999998621     12344566778998874


Q ss_pred             chhccCccchhhhcCCCCCceeEeccccccc-CCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCC
Q 010842          287 GSACICPEFRHYLNGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTG  365 (499)
Q Consensus       287 ~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s  365 (499)
                      ..     .+-+.-. -..-|.+-|...|.=+ +..-.|+-++||++...+.    ..|+...             ++..|
T Consensus       173 WP-----hyTpI~~-~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM----~~y~~ln-------------TiGvS  229 (363)
T PF04864_consen  173 WP-----HYTPITA-PADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKM----TKYMELN-------------TIGVS  229 (363)
T ss_dssp             ST-----TTS---S--B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHH----HHHHHHH-------------CSS--
T ss_pred             cc-----cccccCC-CCCCceEEEEEecccCccccccceeeecCHHHHHHH----HHHHHHh-------------cccCc
Confidence            43     2222111 1135889999888643 3445899999998755332    2333221             12222


Q ss_pred             CC--CCcHHHHHHHHH-hcHH-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CC------------CceEEEEEe
Q 010842          366 RR--FKSLRLWMVLRS-YGVL-----NLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PR------------HFALVCFRL  424 (499)
Q Consensus       366 r~--~~al~~~~~l~~-~g~~-----g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~------------~~~~v~f~~  424 (499)
                      |-  .+++++.-++.. ++.+     -+.--.+...+.=+.|.+.+.+...|.+.. +|            ....-++++
T Consensus       230 ~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkC  309 (363)
T PF04864_consen  230 RDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKC  309 (363)
T ss_dssp             HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEec
Confidence            22  245555443322 2221     111112222233345667777766676643 22            223344555


Q ss_pred             cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-GLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      ...+       +..+.   +.|.+.|++--++..++ +..++|+|+.   -+++|.+.+++.|..+
T Consensus       310 e~ee-------d~DC~---~~l~~~~I~tr~G~~fga~~ryVRlSml---~~~d~Fd~l~~rL~~l  362 (363)
T PF04864_consen  310 EREE-------DEDCY---AVLREAKIITRSGVLFGADSRYVRLSML---KRDDDFDQLLERLSKL  362 (363)
T ss_dssp             SSCG-------GSSHH---HHHHCTTEEEEEGGGGTS-TTEEEEESS---S-HHHHHHHHHHHHCC
T ss_pred             CCcc-------cccHH---HHHHhCCcccCCCCccCCCCCeEEEecc---CCHHHHHHHHHHHHhh
Confidence            4321       11122   23334453322333343 2468999997   6889999999998753

Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.

>PLN02994 1-aminocyclopropane-1-carboxylate synthase

Probab=91.87  E-value=0.42  Score=41.53  Aligned_cols=63  Identities=5%  Similarity=-0.017  Sum_probs=45.9

Q ss_pred             cccChhhHHHHHHHHHHHHHHcC--CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842          121 WLASPASTELEIVVMDWLATMLK--LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH  198 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g--~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H  198 (499)
                      |....+..++.+++.+|+.+.+|  .+-..     ...++|+|++.|+..++.+..+           ++..|+++.+.+
T Consensus        88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~p-----d~Ivvt~Ga~~al~~l~~~l~d-----------pGD~VlVp~P~Y  151 (153)
T PLN02994         88 FQDYHGLANFRKAIANFMAEARGGRVKFDA-----DMIVLSAGATAANEIIMFCIAD-----------PGDAFLVPTPYY  151 (153)
T ss_pred             CCCCCCcHHHHHHHHHHHHHHhCCCCccch-----hheEEcCCHHHHHHHHHHHHcC-----------CCCEEEEeCCCC
Confidence            44455678999999999999988  32111     1468999999998887776644           577788887765


Q ss_pred             h
Q 010842          199 S  199 (499)
Q Consensus       199 ~  199 (499)
                      .
T Consensus       152 ~  152 (153)
T PLN02994        152 A  152 (153)
T ss_pred             C
Confidence            4

>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]

Probab=86.56  E-value=9.8  Score=36.57  Aligned_cols=117  Identities=21%  Similarity=0.170  Sum_probs=68.2

Q ss_pred             EEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC-ch-h--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHH
Q 010842          157 VIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT-HS-T--FAKVCKLAGVSPANIRALPTSVDANFSLSPQL  232 (499)
Q Consensus       157 ~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~-H~-s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~  232 (499)
                      ++|.||.++|..-..+|..+++      |. +.+.++-... -| .  ..--..++|.   .++.++...+  +.++ ..
T Consensus        67 lvT~GgiQSNh~r~tAavA~~l------Gl-~~v~ile~~~~~y~~ngn~Ll~~l~G~---~~~~~~~~~d--~~~~-~~  133 (323)
T COG2515          67 LVTYGGIQSNHVRQTAAVAAKL------GL-KCVLILENIEANYLLNGNLLLSKLMGA---EVRAVDAGTD--IGIN-AS  133 (323)
T ss_pred             EEEecccchhHHHHHHHHHHhc------CC-cEEEEEeccccccccccchhhhhhcCc---eEEEecCCCC--hhhc-hh
Confidence            8999999999987777655432      22 3344433222 00 0  1222356788   8888875432  3222 23


Q ss_pred             HHHHHHHHHHcCCccEEEEEecCCCcccc---cCChhHHHHHHHH-hCCEEEeeccccc
Q 010842          233 LRRAVEADVEAGLVPLFLCATVGTTSTTA---VDNVEPLAEVANE-YGIWVHVDAAYAG  287 (499)
Q Consensus       233 L~~~i~~~~~~g~~p~~vv~t~gtt~~G~---id~l~~I~~ia~~-~~~~lhvD~A~g~  287 (499)
                      .+...++-+++|.+|+ |+.-.|.++.|.   +.=..||.+-+++ ..+-.+|.++-++
T Consensus       134 ~~~~~e~~~~~g~kpy-vIp~GG~~~~g~lGyv~~a~Ei~~Q~~~~~~fD~vVva~gs~  191 (323)
T COG2515         134 AEELAEEVRKQGGKPY-VIPEGGSSPLGALGYVRLALEIAEQAEQLLKFDSVVVAPGSG  191 (323)
T ss_pred             hHHHHHHHHhcCCCCc-EeccCCcCccccccHHHHHHHHHHHHhhccCCCEEEEeCCCc
Confidence            3344444556788895 556666888554   4666788888877 4565666655333

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	499
3rbf_A	480	Crystal Structure Of Human Aromatic L-Amino Acid De		1e-124
3rch_A	480	Crystal Structure Of Human Aromatic L-Amino Acid De		1e-123
1js3_A	486	Crystal Structure Of Dopa Decarboxylase In Complex		1e-118
4e1o_A	481	Human Histidine Decarboxylase Complex With Histidin		1e-111
3k40_A	475	Crystal Structure Of Drosophila 3,4-Dihydroxyphenyl		1e-108
3vp6_A	511	Structural Characterization Of Glutamic Acid Decarb		1e-35
2okj_A	504	The X-Ray Crystal Structure Of The 67kda Isoform Of		5e-35
2okk_A	497	The X-Ray Crystal Structure Of The 65kda Isoform Of		1e-30
2jis_A	515	Human Cysteine Sulfinic Acid Decarboxylase (Csad) I		1e-30
2qma_A	497	Crystal Structure Of Glutamate Decarboxylase Domain		8e-22
3f9t_A	397	Crystal Structure Of L-tyrosine Decarboxylase Mfna		1e-06

>pdb|3RBF|A Chain A, Crystal Structure Of Human Aromatic L-Amino Acid Decarboxylase (Aadc) In The Apo Form Length = 480

Iteration: 1
 Score =  442 bits (1136), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 216/491 (43%), Positives = 306/491 (62%), Gaps = 23/491 (4%)
Query: 17  LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDV 76
           ++A EFR++  +MVD++A+Y + IE   V   VEPG+LR  +P +AP  P++FE I+ DV
Sbjct: 1   MNASEFRRRGKEMVDYVANYMEGIEGRQVYPDVEPGYLRPLIPAAAPQEPDTFEDIINDV 60
Query: 77  QEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMD 136
           ++ I+PG+THW SP FFA+FP   S    L +MLC     +GF+W ASPA TELE V+MD
Sbjct: 61  EKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMD 120
Query: 137 WLATMLKLPKTFM--FSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN--------M 186
           WL  ML+LPK F+   +G GGGVIQ + S++ LV L+AAR + +  + A +        M
Sbjct: 121 WLGKMLELPKAFLNEKAGEGGGVIQGSASEATLVALLAARTKVIHRLQAASPELTQAAIM 180
Query: 187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV 246
            KLV Y SDQ HS+  +   + GV    ++A+P+  D NF++    L+ A+E D  AGL+
Sbjct: 181 EKLVAYSSDQAHSSVERAGLIGGV---KLKAIPS--DGNFAMRASALQEALERDKAAGLI 235
Query: 247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD 306
           P F+ AT+GTT+  + DN+  +  + N+  IW+HVDAAYAGSA ICPEFRH LNG+E  D
Sbjct: 236 PFFMVATLGTTTCCSFDNLLEVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVEFAD 295
Query: 307 SFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR 366
           SF+F+PHKWLL   DC  +WVK+   L  A   DP YLK+   +S  + D++ WQ+  GR
Sbjct: 296 SFNFNPHKWLLVNFDCSAMWVKKRTDLTGAFRLDPTYLKHSHQDSGLITDYRHWQIPLGR 355
Query: 367 RFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP 426
           RF+SL++W V R YGV  LQ++IR  ++L+  FE  V+ DPRFEI V     LVCFRL  
Sbjct: 356 RFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFESLVRQDPRFEICVEVILGLVCFRLK- 414
Query: 427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486
                   +  +N  LL  +NS  +++L    +   ++LRFA+ +   +  HV  AWE I
Sbjct: 415 -------GSNKVNEALLQRINSAKKIHLVPCHLRDKFVLRFAICSRTVESAHVQRAWEHI 467
Query: 487 MEGADRLFKGS 497
            E A  + +  
Sbjct: 468 KELAADVLRAE 478

>pdb|3RCH|A Chain A, Crystal Structure Of Human Aromatic L-Amino Acid Decarboxylase (Aadc) In The Open Conformation With Llp And Plp Bound To Chain-A And Chain- B Respectively Length = 480

Iteration: 1
 Score =  439 bits (1130), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 215/490 (43%), Positives = 305/490 (62%), Gaps = 23/490 (4%)
Query: 17  LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDV 76
           ++A EFR++  +MVD++A+Y + IE   V   VEPG+LR  +P +AP  P++FE I+ DV
Sbjct: 1   MNASEFRRRGKEMVDYVANYMEGIEGRQVYPDVEPGYLRPLIPAAAPQEPDTFEDIINDV 60
Query: 77  QEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMD 136
           ++ I+PG+THW SP FFA+FP   S    L +MLC     +GF+W ASPA TELE V+MD
Sbjct: 61  EKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMD 120
Query: 137 WLATMLKLPKTFM--FSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN--------M 186
           WL  ML+LPK F+   +G GGGVIQ + S++ LV L+AAR + +  + A +        M
Sbjct: 121 WLGKMLELPKAFLNEKAGEGGGVIQGSASEATLVALLAARTKVIHRLQAASPELTQAAIM 180
Query: 187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV 246
            KLV Y SDQ HS+  +   + GV    ++A+P+  D NF++    L+ A+E D  AGL+
Sbjct: 181 EKLVAYSSDQAHSSVERAGLIGGV---KLKAIPS--DGNFAMRASALQEALERDKAAGLI 235
Query: 247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD 306
           P F+ AT+GTT+  + DN+  +  + N+  IW+HVDAAYAGSA ICPEFRH LNG+E  D
Sbjct: 236 PFFMVATLGTTTCCSFDNLLEVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVEFAD 295
Query: 307 SFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR 366
           SF+F+PH WLL   DC  +WVK+   L  A   DP YLK+   +S  + D++ WQ+  GR
Sbjct: 296 SFNFNPHXWLLVNFDCSAMWVKKRTDLTGAFRLDPTYLKHSHQDSGLITDYRHWQIPLGR 355
Query: 367 RFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP 426
           RF+SL++W V R YGV  LQ++IR  ++L+  FE  V+ DPRFEI V     LVCFRL  
Sbjct: 356 RFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFESLVRQDPRFEICVEVILGLVCFRLK- 414
Query: 427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486
                   +  +N  LL  +NS  +++L    +   ++LRFA+ +   +  HV  AWE I
Sbjct: 415 -------GSNKVNEALLQRINSAKKIHLVPCHLRDKFVLRFAICSRTVESAHVQRAWEHI 467
Query: 487 MEGADRLFKG 496
            E A  + + 
Sbjct: 468 KELAADVLRA 477

>pdb|1JS3|A Chain A, Crystal Structure Of Dopa Decarboxylase In Complex With The Inhibitor Carbidopa Length = 486

Iteration: 1
 Score =  423 bits (1088), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 211/480 (43%), Positives = 300/480 (62%), Gaps = 23/480 (4%)
Query: 17  LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDV 76
           ++A +FR++  +MVD++ADY + IE   V   V+PG+LR  +P +AP  P++FE IL+DV
Sbjct: 1   MNASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDV 60
Query: 77  QEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMD 136
           ++ I+PG+THW SP FFA+FP   S    L +MLC     +GF+W ASPA TELE V+MD
Sbjct: 61  EKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMD 120
Query: 137 WLATMLKLPKTFMFSGTGGG--VIQNTTSDSILVTLIAARDRALDAVGAEN--------M 186
           WL  ML+LP+ F+    G G  VIQ + S++ LV L+AAR + +  + A +        +
Sbjct: 121 WLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVL 180
Query: 187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV 246
            KLV Y SDQ HS+  +   + GV    ++A+P+  D  F++    L+ A+E D  AGL+
Sbjct: 181 EKLVAYASDQAHSSVERAGLIGGV---KLKAIPS--DGKFAMRASALQEALERDKAAGLI 235
Query: 247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD 306
           P F+ AT+GTTS  + DN+  +  + +E  IW+HVDAAYAGSA ICPEFRH LNG+E  D
Sbjct: 236 PFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFAD 295
Query: 307 SFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR 366
           SF+F+PHKWLL   DC  +WVK+   L  A   DP YLK+    S  + D++ WQ+  GR
Sbjct: 296 SFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGR 355
Query: 367 RFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP 426
           RF+SL++W V R YGV  LQ++IR  ++L+  FE FV  DPRFE+       LVCFRL  
Sbjct: 356 RFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLK- 414
Query: 427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486
                   ++ LN  LL+ +NS  +++L    + G ++LRFA+ +   +  HV  AWE I
Sbjct: 415 -------GSDGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHI 467

>pdb|4E1O|A Chain A, Human Histidine Decarboxylase Complex With Histidine Methyl Ester (Hme) Length = 481

Iteration: 1
 Score =  397 bits (1020), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 201/485 (41%), Positives = 292/485 (60%), Gaps = 26/485 (5%)
Query: 17  LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDV 76
           ++ +E+R++  +MVD+I  Y   +    V   V+PG+LR+ LP+SAP  P+S+++I  D+
Sbjct: 6   MEPEEYRERGREMVDYICQYLSTVRERRVTPDVQPGYLRAQLPESAPEDPDSWDSIFGDI 65
Query: 77  QEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMD 136
           +  I+PG+ HW SP+  A++PA  S    LG+ML    N +GF W +SPA TELE+ VMD
Sbjct: 66  ERIIMPGVVHWQSPHMHAYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMD 125
Query: 137 WLATMLKLPKTFMF---SGTGGGVIQNTTSDSILVTLIAARDRAL--------DAVGAEN 185
           WLA ML LP+ F+    S  GGGV+Q+T S+S L+ L+AAR   +        DA  +  
Sbjct: 126 WLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSL 185
Query: 186 MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGL 245
             +LV Y SDQ HS+   V K   +S   ++ LP  VD NFSL  + L++A+E D + GL
Sbjct: 186 NARLVAYASDQAHSS---VEKAGLISLVKMKFLP--VDDNFSLRGEALQKAIEEDKQRGL 240
Query: 246 VPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERV 305
           VP+F+CAT+GTT   A D +  L  +    G+W+H+DAAYAG+A +CPEFR +L GIE  
Sbjct: 241 VPVFVCATLGTTGVCAFDXLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYA 300
Query: 306 DSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTG 365
           DSF+F+P KW++ + DC   WVK    L +  S +P YL++  + S    DF  WQ+   
Sbjct: 301 DSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRH--ANSGVATDFMHWQIPLS 358
Query: 366 RRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLN 425
           RRF+S++LW V+RS+GV NLQ+H+R    +AK FE  V++DP FEI   RH  LV FRL 
Sbjct: 359 RRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVFRLK 418
Query: 426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWEL 485
             P+S       L   +L  +   GR++L    +    ++RF V +  T    ++  W L
Sbjct: 419 G-PNS-------LTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRDWNL 470
Query: 486 IMEGA 490
           I + A
Sbjct: 471 IRDAA 475

>pdb|3K40|A Chain A, Crystal Structure Of Drosophila 3,4-Dihydroxyphenylalanine Decarboxylase Length = 475

Iteration: 1
 Score =  389 bits (999), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/489 (40%), Positives = 288/489 (58%), Gaps = 30/489 (6%)
Query: 17  LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDV 76
           ++A EF+  A  MVDFIA+Y +NI    VL +V+PG+L+  +PD+AP +PE ++ +++D+
Sbjct: 1   MEAPEFKDFAKTMVDFIAEYLENIRERRVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDI 60
Query: 77  QEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMD 136
           +  I+PG+THW SP F A+FP   S    + +ML      +GF W+ASPA TELE+V+MD
Sbjct: 61  ERVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMD 120
Query: 137 WLATMLKLPKTFMFSG--TGGGVIQNTTSDSILVTLIAARDRALDAVGAENMH------- 187
           WL  ML+LP  F+      GGGVIQ T S+S LV L+ A+ + L  V  + +H       
Sbjct: 121 WLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEV--KELHPEWDEHT 178
Query: 188 ---KLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG 244
              KLV Y SDQ HS+  +   L GV   ++++       N  +    L +A+E DV  G
Sbjct: 179 ILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQS------ENHRMRGAALEKAIEQDVAEG 232
Query: 245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIER 304
           L+P +   T+GTT++ A D ++    V N++ +W+HVDAAYAGSA ICPE+RH + GIE 
Sbjct: 233 LIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIES 292
Query: 305 VDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGT 364
            DSF+F+PH W+L   DC  +W+K P  +V A + DP YLK+      S  D++ WQ+  
Sbjct: 293 ADSFNFNPHXWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKH--DMQGSAPDYRHWQIPL 350
Query: 365 GRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRL 424
           GRRF++L+LW VLR YGV NLQ+HIR     AK F     +D RFE+    +  LVCFRL
Sbjct: 351 GRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRL 410
Query: 425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWE 484
                 GS +    N  LL  +N  G ++L    +  +Y LR A+ +  T    +  +W+
Sbjct: 411 K-----GSNER---NEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWK 462
Query: 485 LIMEGADRL 493
            +   AD +
Sbjct: 463 EVSAAADEM 471

>pdb|3VP6|A Chain A, Structural Characterization Of Glutamic Acid Decarboxylase; Insights Into The Mechanism Of Autoinactivation Length = 511

Iteration: 1
 Score =  147 bits (371), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 171/383 (44%), Gaps = 15/383 (3%)
Query: 66  PESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASP 125
           PES E IL D ++ +  G+     P FF      +   G  GE L +  N+  F +  +P
Sbjct: 73  PESLEQILVDCRDTLKYGVRTG-HPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAP 131
Query: 126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN 185
               +E + +  +  ++        S  G G+     + S + +++AAR +    V  + 
Sbjct: 132 VFVLMEQITLKKMREIVGWS-----SKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKG 186
Query: 186 MH---KLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE 242
           M    KLV++ S+Q+H +  K     G    N+  +    +    + P      +    +
Sbjct: 187 MAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNV--ILIKCNERGKIIPADFEAKILEAKQ 244
Query: 243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI 302
            G VP ++ AT GTT   A D ++ +A++  +Y +W+HVDAA+ G   +  + RH LNGI
Sbjct: 245 KGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGI 304
Query: 303 ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQV 362
           ER +S +++PH  +   L C  + VK+ G+L         YL  +    +   D  D  +
Sbjct: 305 ERANSVTWNPHXMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAI 364
Query: 363 GTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV---PRHFAL 419
             GR     + W++ ++ G +  ++ I   + LA+     +K+   FE+V    P H   
Sbjct: 365 QCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEH-TN 423
Query: 420 VCFRLNPYPHSGSADTEMLNRKL 442
           VCF   P    G  D+     KL
Sbjct: 424 VCFWYIPQSLRGVPDSPQRREKL 446

>pdb|2OKJ|A Chain A, The X-Ray Crystal Structure Of The 67kda Isoform Of Glutamic Acid Decarboxylase (Gad67) Length = 504

Iteration: 1
 Score =  145 bits (366), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 171/383 (44%), Gaps = 15/383 (3%)
Query: 66  PESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASP 125
           PES E IL D ++ +  G+     P FF      +   G  GE L +  N+  F +  +P
Sbjct: 70  PESLEQILVDCRDTLKYGVRTG-HPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAP 128
Query: 126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN 185
               +E + +  +  ++        S  G G+     + S + +++AAR +    V  + 
Sbjct: 129 VFVLMEQITLKKMREIVGWS-----SKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKG 183
Query: 186 MH---KLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE 242
           M    KLV++ S+Q+H +  K     G    N+  +    +    + P      +    +
Sbjct: 184 MAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNV--ILIKCNERGKIIPADFEAKILEAKQ 241
Query: 243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI 302
            G VP ++ AT GTT   A D ++ +A++  +Y +W+HVDAA+ G   +  + RH LNGI
Sbjct: 242 KGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGI 301
Query: 303 ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQV 362
           ER +S +++PH  +   L C  + VK+ G+L         YL     + +   D  D  +
Sbjct: 302 ERANSVTWNPHXMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAI 361
Query: 363 GTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV---PRHFAL 419
             GR     + W++ ++ G +  ++ I   + LA+     +K+   FE+V    P H   
Sbjct: 362 QCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEH-TN 420
Query: 420 VCFRLNPYPHSGSADTEMLNRKL 442
           VCF   P    G  D+     KL
Sbjct: 421 VCFWYIPQSLRGVPDSPQRREKL 443

>pdb|2OKK|A Chain A, The X-Ray Crystal Structure Of The 65kda Isoform Of Glutamic Acid Decarboxylase (Gad65) Length = 497

Iteration: 1
 Score =  131 bits (329), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 163/368 (44%), Gaps = 15/368 (4%)
Query: 65  RPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLAS 124
           +P++ E IL   Q  +   I     P +F      +   G   + L +  N+  F +  +
Sbjct: 65  QPQNLEEILMHCQTTLKYAIKTG-HPRYFNQLSTGLDMVGLAADWLTSTANTNMFTYEIA 123
Query: 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE 184
           P    LE V +  +  ++  P      G+G G+     + S +  ++ AR +    V  +
Sbjct: 124 PVFVLLEYVTLKKMREIIGWP-----GGSGDGIFSPGGAISNMYAMMIARFKMFPEVKEK 178
Query: 185 NMH---KLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV 241
            M    +L+ + S+ +H +  K     G+   ++  +    D    + P  L R +    
Sbjct: 179 GMAALPRLIAFTSEHSHFSLKKGAAALGIGTDSV--ILIKCDERGKMIPSDLERRILEAK 236
Query: 242 EAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNG 301
           + G VP  + AT GTT   A D +  +A++  +Y IW+HVDAA+ G   +  + +  L+G
Sbjct: 237 QKGFVPFLVSATAGTTVYGAFDPLLAVADICKKYKIWMHVDAAWGGGLLMSRKHKWKLSG 296
Query: 302 IERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQ 361
           +ER +S +++PH  +   L C  L V++ GL+         YL  +    +   D  D  
Sbjct: 297 VERANSVTWNPHXMMGVPLQCSALLVREEGLMQNCNQMHASYLFQQDKHYDLSYDTGDKA 356
Query: 362 VGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV---PRHFA 418
           +  GR     +LW++ R+ G    ++H+   + LA+     +K+   +E+V    P+H  
Sbjct: 357 LQCGRHVDVFKLWLMWRAKGTTGFEAHVDKCLELAEYLYNIIKNREGYEMVFDGKPQH-T 415
Query: 419 LVCFRLNP 426
            VCF   P
Sbjct: 416 NVCFWYIP 423

>pdb|2JIS|A Chain A, Human Cysteine Sulfinic Acid Decarboxylase (Csad) In Complex With Plp. Length = 515

Iteration: 1
 Score =  130 bits (328), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 173/400 (43%), Gaps = 20/400 (5%)
Query: 50  EPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEM 109
           EP  L+  L      + ES + IL+  +  I   +     P FF    + +      G +
Sbjct: 70  EPEELKQLLDLELRSQGESQKQILERCRAVIRYSVKTG-HPRFFNQLFSGLDPHALAGRI 128
Query: 110 LCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTG----GGVIQNTTSDS 165
           +    N+  + +  +P    +E  V+  L  ++        SG G    GG I N     
Sbjct: 129 ITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWS-----SGDGIFCPGGSISN----- 178
Query: 166 ILVTLIAARDRALDAV--GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVD 223
           +    +A   R  D    G   +  L ++ S + H +  K     G+   ++R +    D
Sbjct: 179 MYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVV--KAD 236
Query: 224 ANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDA 283
               + P+ L R +      G VP  + AT GTT   A D +E +A+V   +G+W+HVDA
Sbjct: 237 ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDA 296
Query: 284 AYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQ-PGLLVKALSTDPE 342
           A+ GS  +    RH L+GI+R DS +++PHK L + L C  L ++    LL +   +   
Sbjct: 297 AWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQAS 356
Query: 343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGF 402
           YL  +    +  +D  D  V  GRR   L+LW++ ++ G   L+  I     LA+     
Sbjct: 357 YLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEE 416
Query: 403 VKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKL 442
           +K    FE+V+   F  VCF   P    G  ++   + +L
Sbjct: 417 MKKREGFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERL 456

>pdb|2QMA|A Chain A, Crystal Structure Of Glutamate Decarboxylase Domain Of Diaminobutyrate-Pyruvate Transaminase And L-2,4-Diaminobutyrate Decarboxylase From Vibrio Parahaemolyticus Length = 497

Iteration: 1
 Score =  101 bits (252), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 156/367 (42%), Gaps = 30/367 (8%)
Query: 114 FNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAA 173
            N    +W  + ++T +E  V++WL     L +      T GG   N         L  A
Sbjct: 125 LNQSXDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQXG------LXLA 178
Query: 174 RDRALDAVGAENMHKL---------VVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDA 224
           RD   D +   ++ KL          +  S ++H T  K     G+    +  +  + D 
Sbjct: 179 RDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWXGLGEKAVXTVDANADG 238
Query: 225 NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAA 284
              ++ +L     +A  E GL+P  +  T GTT   A+D+++ +A+ A ++  W HVD A
Sbjct: 239 TXDIT-KLDEVIAQAKAE-GLIPFAIVGTAGTTDHGAIDDLDFIADXAVKHDXWXHVDGA 296
Query: 285 YAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYL 344
           Y G A I    +  L G+ER  S S   HK     + C  L V       K L    +YL
Sbjct: 297 YGG-ALILSSHKSRLKGVERAHSISVDFHKLFYQTISCGALLVNDKSNF-KFLLHHADYL 354
Query: 345 KNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFE--GF 402
             +  E  ++V   D  + T +RF +L+++   ++ G   L      D  LA+  E    
Sbjct: 355 NREHDELPNLV---DKSIATTKRFDALKVFXTXQNVGPKALGD--XYDHLLAQTLEVADX 409
Query: 403 VKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGL 462
           ++++ +FE++     + V FR        +AD + LN+ L     + G   L  TIV G 
Sbjct: 410 IRTNDQFELLAEPSLSTVLFRATHE----TADLDELNKALRLEALTRGIAVLGETIVDGK 465
Query: 463 YMLRFAV 469
             L+F +
Sbjct: 466 TALKFTI 472

>pdb|3F9T|A Chain A, Crystal Structure Of L-tyrosine Decarboxylase Mfna (ec 4.1.1.25) (np_247014.1) From Methanococcus Jannaschii At 2.11 A Resolution Length = 397

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 59/125 (47%), Gaps = 19/125 (15%)
Query: 198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEA-DVEAGLVPLFLCATVGT 256
           H +F K     G    ++  +   +  ++++  + ++ AVE  DV+       +    GT
Sbjct: 133 HFSFEK-----GREXXDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDG------IIGIAGT 181
Query: 257 TSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIER-------VDSFS 309
           T    +DN+E L+++A E  I++HVDAA+ G      + ++   G+         VDS +
Sbjct: 182 TELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSIT 241
Query: 310 FSPHK 314
             PHK
Sbjct: 242 IDPHK 246

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	499
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	0.0
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	0.0
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	0.0
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	0.0
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	0.0
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	0.0
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	2e-44
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	4e-42
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	3e-40
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	1e-36
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	1e-31
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	4e-23
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	1e-12
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	1e-11
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	2e-05
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	6e-05
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	3e-04
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	3e-04

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A* Length = 486

 Score =  628 bits (1622), Expect = 0.0
 Identities = 215/487 (44%), Positives = 305/487 (62%), Gaps = 23/487 (4%)

Query: 17  LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDV 76
           ++A +FR++  +MVD++ADY + IE   V   V+PG+LR  +P +AP  P++FE IL+DV
Sbjct: 1   MNASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDV 60

Query: 77  QEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMD 136
           ++ I+PG+THW SP FFA+FP   S    L +MLC     +GF+W ASPA TELE V+MD
Sbjct: 61  EKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMD 120

Query: 137 WLATMLKLPKTFMF--SGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN--------M 186
           WL  ML+LP+ F+   +G GGGVIQ + S++ LV L+AAR + +  + A +        +
Sbjct: 121 WLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVL 180

Query: 187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV 246
            KLV Y SDQ HS+  +   + GV    ++A+P+  D  F++    L+ A+E D  AGL+
Sbjct: 181 EKLVAYASDQAHSSVERAGLIGGV---KLKAIPS--DGKFAMRASALQEALERDKAAGLI 235

Query: 247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD 306
           P F+ AT+GTTS  + DN+  +  + +E  IW+HVDAAYAGSA ICPEFRH LNG+E  D
Sbjct: 236 PFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFAD 295

Query: 307 SFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR 366
           SF+F+PHKWLL   DC  +WVK+   L  A   DP YLK+    S  + D++ WQ+  GR
Sbjct: 296 SFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGR 355

Query: 367 RFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP 426
           RF+SL++W V R YGV  LQ++IR  ++L+  FE FV  DPRFE+       LVCFRL  
Sbjct: 356 RFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLKG 415

Query: 427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486
                   ++ LN  LL+ +NS  +++L    + G ++LRFA+ +   +  HV  AWE I
Sbjct: 416 --------SDGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHI 467

Query: 487 MEGADRL 493
              A  L
Sbjct: 468 RGLAAEL 474

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens} Length = 481

 Score =  625 bits (1615), Expect = 0.0
 Identities = 195/493 (39%), Positives = 287/493 (58%), Gaps = 26/493 (5%)

Query: 14  FKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETIL 73
              ++ +E+R++  +MVD+I  Y   +    V   V+PG+LR+ LP+SAP  P+S+++I 
Sbjct: 3   LGSMEPEEYRERGREMVDYICQYLSTVRERRVTPDVQPGYLRAQLPESAPEDPDSWDSIF 62

Query: 74  KDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIV 133
            D++  I+PG+ HW SP+  A++PA  S    LG+ML    N +GF W +SPA TELE+ 
Sbjct: 63  GDIERIIMPGVVHWQSPHMHAYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMN 122

Query: 134 VMDWLATMLKLPKTFMF---SGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN----- 185
           VMDWLA ML LP+ F+    S  GGGV+Q+T S+S L+ L+AAR   +  +         
Sbjct: 123 VMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADE 182

Query: 186 ---MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE 242
                +LV Y SDQ HS+  K   ++ V    ++ LP   D NFSL  + L++A+E D +
Sbjct: 183 SSLNARLVAYASDQAHSSVEKAGLISLV---KMKFLPV--DDNFSLRGEALQKAIEEDKQ 237

Query: 243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI 302
            GLVP+F+CAT+GTT   A D +  L  +    G+W+H+DAAYAG+A +CPEFR +L GI
Sbjct: 238 RGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGI 297

Query: 303 ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQV 362
           E  DSF+F+P KW++ + DC   WVK    L +  S +P YL++  + S    DF  WQ+
Sbjct: 298 EYADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRH--ANSGVATDFMHWQI 355

Query: 363 GTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCF 422
              RRF+S++LW V+RS+GV NLQ+H+R    +AK FE  V++DP FEI   RH  LV F
Sbjct: 356 PLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSFEIPAKRHLGLVVF 415

Query: 423 RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAA 482
           RL             L   +L  +   GR++L    +    ++RF V +  T    ++  
Sbjct: 416 RLKG--------PNSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRD 467

Query: 483 WELIMEGADRLFK 495
           W LI + A  +  
Sbjct: 468 WNLIRDAATLILS 480

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} Length = 475

 Score =  616 bits (1591), Expect = 0.0
 Identities = 199/489 (40%), Positives = 288/489 (58%), Gaps = 26/489 (5%)

Query: 17  LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDV 76
           ++A EF+  A  MVDFIA+Y +NI    VL +V+PG+L+  +PD+AP +PE ++ +++D+
Sbjct: 1   MEAPEFKDFAKTMVDFIAEYLENIRERRVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDI 60

Query: 77  QEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMD 136
           +  I+PG+THW SP F A+FP   S    + +ML      +GF W+ASPA TELE+V+MD
Sbjct: 61  ERVIMPGVTHWHSPKFHAYFPTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMD 120

Query: 137 WLATMLKLPKTFMFS--GTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN--------M 186
           WL  ML+LP  F+    G GGGVIQ T S+S LV L+ A+ + L  V   +        +
Sbjct: 121 WLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTIL 180

Query: 187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV 246
            KLV Y SDQ HS+  +   L GV    +R++      N  +    L +A+E DV  GL+
Sbjct: 181 GKLVGYCSDQAHSSVERAGLLGGV---KLRSVQ---SENHRMRGAALEKAIEQDVAEGLI 234

Query: 247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD 306
           P +   T+GTT++ A D ++    V N++ +W+HVDAAYAGSA ICPE+RH + GIE  D
Sbjct: 235 PFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESAD 294

Query: 307 SFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR 366
           SF+F+PHKW+L   DC  +W+K P  +V A + DP YLK+      S  D++ WQ+  GR
Sbjct: 295 SFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHD--MQGSAPDYRHWQIPLGR 352

Query: 367 RFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP 426
           RF++L+LW VLR YGV NLQ+HIR     AK F     +D RFE+    +  LVCFRL  
Sbjct: 353 RFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFELAAEINMGLVCFRLKG 412

Query: 427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486
                   +   N  LL  +N  G ++L    +  +Y LR A+ +  T    +  +W+ +
Sbjct: 413 --------SNERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEV 464

Query: 487 MEGADRLFK 495
              AD + +
Sbjct: 465 SAAADEMEQ 473

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A* Length = 504

 Score =  594 bits (1534), Expect = 0.0
 Identities = 113/507 (22%), Positives = 205/507 (40%), Gaps = 27/507 (5%)

Query: 6   SNM-AESVQFKPLDAQEFRKQAHQMVDFIADYYQNIE--SYPVLTQVEPGFLRSALPD-- 60
           SN+ A  +       ++  +   ++VD + +Y +     S  VL    P  L   +    
Sbjct: 4   SNLFARDLLPAKNGEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFN 63

Query: 61  -SAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGF 119
                 PES E IL D ++ +  G+     P FF      +   G  GE L +  N+  F
Sbjct: 64  LELSDHPESLEQILVDCRDTLKYGVRTG-HPRFFNQLSTGLDIIGLAGEWLTSTANTNMF 122

Query: 120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD 179
            +  +P    +E + +  +  ++        S  G G+     + S + +++AAR +   
Sbjct: 123 TYEIAPVFVLMEQITLKKMREIVGWS-----SKDGDGIFSPGGAISNMYSIMAARYKYFP 177

Query: 180 AV---GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRA 236
            V   G   + KLV++ S+Q+H +  K     G    N+  +    +    + P      
Sbjct: 178 EVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKC--NERGKIIPADFEAK 235

Query: 237 VEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFR 296
           +    + G VP ++ AT GTT   A D ++ +A++  +Y +W+HVDAA+ G   +  + R
Sbjct: 236 ILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHR 295

Query: 297 HYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD 356
           H LNGIER +S +++PHK +   L C  + VK+ G+L         YL     + +   D
Sbjct: 296 HKLNGIERANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYD 355

Query: 357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV--P 414
             D  +  GR     + W++ ++ G +  ++ I   + LA+     +K+   FE+V    
Sbjct: 356 TGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFEMVFNGE 415

Query: 415 RHFALVCFRLNPYPHSGSADTEM-------LNRKLLDWVNSTGRVYLTHT-IVGGLYMLR 466
                VCF   P    G  D+         +  K+   +  +G   + +          R
Sbjct: 416 PEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFR 475

Query: 467 FAVGASLTDERHVVAAWELIMEGADRL 493
             +      +  +    E I      L
Sbjct: 476 MVISNPAATQSDIDFLIEEIERLGQDL 502

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens} Length = 515

 Score =  575 bits (1484), Expect = 0.0
 Identities = 115/502 (22%), Positives = 198/502 (39%), Gaps = 24/502 (4%)

Query: 5   DSNMAESVQFKPLDAQEF-RKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAP 63
           DS    S+   P+  +   R     +VD       ++    V    EP  L+  L     
Sbjct: 25  DSEALPSLAGDPVAVEALLRAVFGVVVDEAIQKGTSVSQ-KVCEWKEPEELKQLLDLELR 83

Query: 64  HRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLA 123
            + ES + IL+  +  I   +     P FF    + +      G ++    N+  + +  
Sbjct: 84  SQGESQKQILERCRAVIRYSVKTG-HPRFFNQLFSGLDPHALAGRIITESLNTSQYTYEI 142

Query: 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV-- 181
           +P    +E  V+  L  ++          +G G+     S S +  +  AR +       
Sbjct: 143 APVFVLMEEEVLRKLRALVGWS-------SGDGIFCPGGSISNMYAVNLARYQRYPDCKQ 195

Query: 182 -GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEAD 240
            G   +  L ++ S + H +  K     G+   ++R +    D    + P+ L R +   
Sbjct: 196 RGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKA--DERGKMVPEDLERQIGMA 253

Query: 241 VEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN 300
              G VP  + AT GTT   A D +E +A+V   +G+W+HVDAA+ GS  +    RH L+
Sbjct: 254 EAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLD 313

Query: 301 GIERVDSFSFSPHKWLLSYLDCCCLWVKQPG-LLVKALSTDPEYLKNKPSESNSVVDFKD 359
           GI+R DS +++PHK L + L C  L ++    LL +   +   YL  +    +  +D  D
Sbjct: 314 GIQRADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGD 373

Query: 360 WQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFAL 419
             V  GRR   L+LW++ ++ G   L+  I     LA+     +K    FE+V+   F  
Sbjct: 374 KVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVN 433

Query: 420 VCFRLNPYPHSGSADTEM-------LNRKLLDWVNSTGRVYLTHTIVGG-LYMLRFAVGA 471
           VCF   P    G  ++         +   L + +   G + + +   G      R  V  
Sbjct: 434 VCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVAN 493

Query: 472 SLTDERHVVAAWELIMEGADRL 493
           S      +      +      L
Sbjct: 494 SALTCADMDFLLNELERLGQDL 515

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus} Length = 497

 Score =  572 bits (1477), Expect = 0.0
 Identities = 102/488 (20%), Positives = 192/488 (39%), Gaps = 29/488 (5%)

Query: 16  PLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPD-SAPHRPESFETILK 74
            L + EF          +   ++ +      + ++P  L  A+      ++    ++++ 
Sbjct: 28  ELGSAEFASVMSHTTSAMKSVFEQVN--APYSGMDPKALEDAINAVDLDNKNAPLKSVID 85

Query: 75  DVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVV 134
           DV E +         P+  A             E + A  N    +W  + ++T +E  V
Sbjct: 86  DVAELVAKNAIFTQHPDCIAHLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKV 145

Query: 135 MDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-------- 186
           ++WL     L +         G+  +  + S  + L+ ARD   D +   ++        
Sbjct: 146 VNWLCDKYDLSE------KADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDY 199

Query: 187 -HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGL 245
             KL +  S ++H T  K     G+    +  +    +A+ ++    L   +      GL
Sbjct: 200 ADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDA--NADGTMDITKLDEVIAQAKAEGL 257

Query: 246 VPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERV 305
           +P  +  T GTT   A+D+++ +A++A ++ +W+HVD AY G A I    +  L G+ER 
Sbjct: 258 IPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGG-ALILSSHKSRLKGVERA 316

Query: 306 DSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTG 365
            S S   HK     + C  L V       K L    +YL  +  E   + +  D  + T 
Sbjct: 317 HSISVDFHKLFYQTISCGALLVNDKSNF-KFLLHHADYLNREHDE---LPNLVDKSIATT 372

Query: 366 RRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLN 425
           +RF +L+++M +++ G   L       +         ++++ +FE++     + V FR  
Sbjct: 373 KRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLFRAT 432

Query: 426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWEL 485
                 +AD + LN+ L     + G   L  TIV G   L+F +           +    
Sbjct: 433 H----ETADLDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSK 488

Query: 486 IMEGADRL 493
           I   A  L
Sbjct: 489 INMLAVEL 496

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A* Length = 514

 Score =  162 bits (411), Expect = 2e-44
 Identities = 74/415 (17%), Positives = 133/415 (32%), Gaps = 43/415 (10%)

Query: 22  FRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKII 81
            + Q     D   D+  ++ S     Q++P   R       P        IL ++     
Sbjct: 36  IQSQPPARRDPTMDWLASLRS-----QIKPYRDRFPSHARLPRAGLPRAEILAEIAAMGA 90

Query: 82  PGITHWLSPN-FFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLAT 140
                W       A +        FL E+      S   +    P++ + E  V+   A 
Sbjct: 91  AESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAH 150

Query: 141 MLKLPK---TFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT 197
           ML       T   + T GG      ++S+L+ +   RD A    G               
Sbjct: 151 MLGGDAAGGTVCGTVTSGG------TESLLLAMKTYRDWARATKGIT---APEAVVPVSA 201

Query: 198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT 257
           H+ F K  +  G+    +   P  +DA++      +R A+  +       + +  +    
Sbjct: 202 HAAFDKAAQYFGI---KLVRTP--LDADYRADVAAMREAITPN------TVVVAGSAPGY 250

Query: 258 STTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPE-----FRHYLNGIERVDSFSFSP 312
               VD +  +A +A E+GI  HVDA   G      E        +   +E V S S   
Sbjct: 251 PHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADT 310

Query: 313 HKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLR 372
           HK+         +  ++P LL        ++       S +         G+     S  
Sbjct: 311 HKYGYGAKGTSVILYRRPDLLHYQYFIAADWPG-GLYFSPTF-------AGSRPGALSAT 362

Query: 373 LWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPY 427
            W  + S G        R  ++ A   +  V++ P  +I+      ++    +  
Sbjct: 363 AWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGD-PLWVIAVASDEL 416

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae} Length = 497

 Score =  156 bits (395), Expect = 4e-42
 Identities = 52/376 (13%), Positives = 118/376 (31%), Gaps = 39/376 (10%)

Query: 63  PHRPESFETILKDVQE-KIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNW 121
           P      + +++++ +   +   T W                  L     A       N 
Sbjct: 39  PSNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGGDDLIHL--QTIAYEKYCVANQ 96

Query: 122 L---ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRAL 178
           L     PA  ++E  V+  +  M   P     S TG G   +  ++S+L+  ++A+  AL
Sbjct: 97  LHPDVFPAVRKMESEVVSMVLRMFNAP-----SDTGCGTTTSGGTESLLLACLSAKMYAL 151

Query: 179 DAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVE 238
              G     +  +      H+ F K     G+    +R +       + +    +++ + 
Sbjct: 152 HHRGI---TEPEIIAPVTAHAGFDKAAYYFGM---KLRHVELDPT-TYQVDLGKVKKFIN 204

Query: 239 ADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG------SACIC 292
            +       + L  +         D++E L ++A +Y + +HVD+               
Sbjct: 205 KN------TVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGY 258

Query: 293 PEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESN 352
                    +  V S S   HK+  +      +  +   L +     +P +         
Sbjct: 259 KNLPLLDFRVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGGLYGS-- 316

Query: 353 SVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMF-EGFVKSDPRFEI 411
                     G+      +  W  + + G        +  +  A  F +   ++ P  +I
Sbjct: 317 ------PTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDI 370

Query: 412 VVPRHFALVCFRLNPY 427
           +    ++++ F     
Sbjct: 371 MGNPRYSVISFSSKTL 386

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9 Length = 456

 Score =  149 bits (378), Expect = 3e-40
 Identities = 56/414 (13%), Positives = 120/414 (28%), Gaps = 61/414 (14%)

Query: 63  PHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWL 122
           P      E I   ++   +                A   +          C        L
Sbjct: 59  PENGIDDEKIKLFLKFLSMMDTDKDPKSVRIGEREARTYSKIHEELSSGFCHGIGRSGNL 118

Query: 123 A-----SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRA 177
                 +  ++ +  +    L +  K       +        +T   SI + L AAR + 
Sbjct: 119 VDPQPKASGASIMYALTNKILESFFKQL---GLNVHAIATPISTGM-SISLCLSAARKKY 174

Query: 178 LDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAV 237
                       VV     +H +  K     G++   +  +         +  + +  A+
Sbjct: 175 ---------GSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLD--GDRVYVPVEDIENAI 223

Query: 238 EADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH 297
           + ++E G  P  + +T+        D++  +A++   Y I   ++ AY   A     +  
Sbjct: 224 KKEIELGNRPC-VLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAY---AIQNNYYLE 279

Query: 298 YLNGI--ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV 355
            L      RVD+   S  K LL+ +    ++      + +   + P              
Sbjct: 280 KLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISLSYP-------------- 325

Query: 356 DFKDWQVGTGRRFKS--LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRF---E 410
                    GR   +  +   + L S G  N    +++     K+ +  +    +    +
Sbjct: 326 ---------GRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGK 376

Query: 411 IVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYM 464
            +        C  +N       +D   +  KL +   +  R        G  Y+
Sbjct: 377 FLDVESPIASCISVN-------SDPVEIAAKLYNLRVTGPRGIKKTDHFGNCYL 423

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii} Length = 397

 Score =  139 bits (351), Expect = 1e-36
 Identities = 64/378 (16%), Positives = 133/378 (35%), Gaps = 44/378 (11%)

Query: 63  PHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWL 122
             +  S + IL+++++        +   N F    + V       +++     +   +  
Sbjct: 6   QEKGVSEKEILEELKKYRSLD-LKYEDGNIFGSMCSNVLP--ITRKIVDIFLETNLGDPG 62

Query: 123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG 182
               +  LE   +  L ++L     +    +GG       +++ L+ L   ++   +   
Sbjct: 63  LFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGG-------TEANLMALRCIKNIWREKRR 115

Query: 183 AE--NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEAD 240
                     +      H +F K  ++  +        P  +  ++++  + ++ AVE  
Sbjct: 116 KGLSKNEHPKIIVPITAHFSFEKGREMMDL---EYIYAP--IKEDYTIDEKFVKDAVEDY 170

Query: 241 VEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICP--EFRHY 298
              G++        GTT    +DN+E L+++A E  I++HVDAA+ G   + P  + ++ 
Sbjct: 171 DVDGII-----GIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGL--VIPFLDDKYK 223

Query: 299 LNGIER-------VDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSES 351
             G+         VDS +  PHK     +    +  K  G   + L  D  YL      +
Sbjct: 224 KKGVNYKFDFSLGVDSITIDPHKMGHCPIPSGGILFKDIGYK-RYLDVDAPYLTETRQAT 282

Query: 352 NSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI 411
                      GT   F     + VLR  G    +  +   +         +K +  F+ 
Sbjct: 283 IL---------GTRVGFGGACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKENN-FKP 332

Query: 412 VVPRHFALVCFRLNPYPH 429
           V+     +V      Y  
Sbjct: 333 VIEPILNIVAIEDEDYKE 350

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana} Length = 502

 Score =  126 bits (318), Expect = 1e-31
 Identities = 53/335 (15%), Positives = 118/335 (35%), Gaps = 30/335 (8%)

Query: 105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSD 164
              +++ +  N    +    P +TEL+   ++ +A +   P     +  G G + ++  +
Sbjct: 71  ECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSS--E 128

Query: 165 SILVTLIAARDRALDAVGAE--NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV 222
           +I++  +A + +  +   AE   + K  +         + K  +   V    ++ +  S 
Sbjct: 129 AIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEV---ELKEVKLSE 185

Query: 223 DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG------ 276
              + + PQ     V+ +       + + A +G+T     ++V+ L ++  E        
Sbjct: 186 G-YYVMDPQQAVDMVDEN------TICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWD 238

Query: 277 IWVHVDAAYAGSACICPEFRHYLN-GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVK 335
             +HVDAA  G            +  +  V S + S HK+ L Y     +  +    L +
Sbjct: 239 TPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPE 298

Query: 336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRL 395
            L     YL      + ++         +    + +  +  L   G    ++ + +    
Sbjct: 299 ELIFHINYL-GADQPTFTL-------NFSKGSSQVIAQYYQLIRLGHEGYRNVMENCREN 350

Query: 396 AKMFEGFVKSDPRFEIVV-PRHFALVCFRLNPYPH 429
             +    ++   RF IV       LV F L     
Sbjct: 351 MIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSSC 385

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A* Length = 452

 Score =  100 bits (251), Expect = 4e-23
 Identities = 53/323 (16%), Positives = 111/323 (34%), Gaps = 40/323 (12%)

Query: 125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD---AV 181
           P S  +++  ++ +A +   P        G   I ++  ++ ++  +A + R      A 
Sbjct: 77  PQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSS--EACMLGGMAMKWRWRKRMEAA 134

Query: 182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV 241
           G       +V G       + K  +   V    +R +P        + P+ +  A + + 
Sbjct: 135 GKPTDKPNLVCGP--VQICWHKFARYWDV---ELREIPMRPG-QLFMDPKRMIEACDEN- 187

Query: 242 EAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE------YGIWVHVDAAYAGSACICPEF 295
                 + +  T G T T   +  +PL +  ++        I +H+DAA  G   + P  
Sbjct: 188 -----TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGF--LAPFV 240

Query: 296 RHYLN---GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESN 352
              +     + RV S S S HK+ L+ L C  +  +    L + L  + +YL      + 
Sbjct: 241 APDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLG-GQIGTF 299

Query: 353 SVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV 412
           ++         +    + +  +      G         +  ++A      +     +E +
Sbjct: 300 AI-------NFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFI 352

Query: 413 VPRHFA----LVCFRLNPYPHSG 431
                      VCF+L      G
Sbjct: 353 CTGRPDEGIPAVCFKLKDGEDPG 375

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A* Length = 450

 Score = 68.9 bits (168), Expect = 1e-12
 Identities = 38/243 (15%), Positives = 70/243 (28%), Gaps = 39/243 (16%)

Query: 161 TTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPT 220
            T  S+ +  +  R +   A       K +++       +  K    AG  P  I  +  
Sbjct: 125 ATGMSLTLCFLTLRHKRPKA-------KYIIW-PRIDQKSCFKSMVTAGFEPVVIENVL- 175

Query: 221 SVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA---VDNVEPLAEVANEYGI 277
                     + +   ++   E G  P  +     TT+  A    D +E LA +   Y I
Sbjct: 176 -EGDELRTDLKAVEAKIQ---ELG--PEHILCLHSTTACFAPRVPDRLEELAVICANYDI 229

Query: 278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL 337
              V+ AY   +  C         + R+D+F  S  K  +  +    +       +    
Sbjct: 230 PHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDIS 289

Query: 338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAK 397
              P                     G      SL + + L S G    +  ++    +  
Sbjct: 290 KMYP---------------------GRASASPSLDVLITLLSLGCSGYRKLLKERKEMFV 328

Query: 398 MFE 400
              
Sbjct: 329 YLS 331

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens} Length = 501

 Score = 65.9 bits (160), Expect = 1e-11
 Identities = 40/243 (16%), Positives = 71/243 (29%), Gaps = 39/243 (16%)

Query: 161 TTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPT 220
            T  S+ +  +  R +   A       K +++       +  K    AG  P  I  +  
Sbjct: 143 ATGMSLTLCFLTLRHKRPKA-------KYIIW-PRIDQKSCFKSMITAGFEPVVIENVL- 193

Query: 221 SVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA---VDNVEPLAEVANEYGI 277
                     + +   V+   E G  P  +     TTS  A    D +E LA +   Y I
Sbjct: 194 -EGDELRTDLKAVEAKVQ---ELG--PDCILCIHSTTSCFAPRVPDRLEELAVICANYDI 247

Query: 278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL 337
              V+ AY   +  C         + R+D+F  S  K  +  +    +       + +  
Sbjct: 248 PHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEIS 307

Query: 338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAK 397
              P                     G      SL + + L S G    +  ++    +  
Sbjct: 308 KMYP---------------------GRASASPSLDVLITLLSLGSNGYKKLLKERKEMFS 346

Query: 398 MFE 400
              
Sbjct: 347 YLS 349

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2 Length = 467

 Score = 46.3 bits (109), Expect = 2e-05
 Identities = 34/209 (16%), Positives = 69/209 (33%), Gaps = 35/209 (16%)

Query: 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183
           S    +L+    +       +P      G G           +L+       +A + V  
Sbjct: 75  SRNYYDLKDKAKELFNYDYIIPAH---QGRGA----ENILFPVLLKYKQKEGKAKNPVFI 127

Query: 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANI---RALPTSVDANF--SLSPQLLRRAVE 238
            N H       D T +      +L G    NI   +A  +    ++      + L+  + 
Sbjct: 128 SNFH------FDTTAA----HVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIA 177

Query: 239 ADVEAGLVPLFLCATVGTTSTTAV--DNVEPLAEVANEYGIWVHVDAAYAGSACI---CP 293
                 +V +    T  +     V   N++ + E+A ++GI+V +D+A            
Sbjct: 178 QHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKAR 237

Query: 294 EFRHYLNGIERV--------DSFSFSPHK 314
           + ++    I+ V        D+ + S  K
Sbjct: 238 DPKYKNATIKEVIFDMYKYADALTMSAKK 266

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli} Length = 755

 Score = 44.7 bits (105), Expect = 6e-05
 Identities = 33/205 (16%), Positives = 57/205 (27%), Gaps = 37/205 (18%)

Query: 160 NTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALP 219
             TS S    + A        V   N HK +  G             L G  P     + 
Sbjct: 228 VGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQG-----------LMLTGAKP---VYMV 273

Query: 220 TSVDANF--------SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT---AVDNVEPL 268
            S +            + P+ L++ +              +    T+ T      N +  
Sbjct: 274 PSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEA 333

Query: 269 AEVANEYGIWVHVDAAYAGSACICPEFR-HYLNGIERVDSFSF------SPHKWLLSYLD 321
            ++  +    +H D A+ G A   P +  HY    E  D          S HK L +   
Sbjct: 334 QDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQ 393

Query: 322 CCCLWVKQPGLLVKALSTDPEYLKN 346
              + V++    +     +      
Sbjct: 394 ASYIHVREGRGAI-----NFSRFNQ 413

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A* Length = 730

 Score = 42.4 bits (99), Expect = 3e-04
 Identities = 28/202 (13%), Positives = 54/202 (26%), Gaps = 25/202 (12%)

Query: 160 NTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA------ 213
             +S++      A        +   N HK          S +     +AG  P       
Sbjct: 196 GGSSNANNTVTSALVSNGDLVLFDRNNHK----------SVYNSALAMAGGRPVYLQTNR 245

Query: 214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST--TAVDNVEPLAEV 271
           N       +  +     ++   A + D E           V    T    + N   + + 
Sbjct: 246 NPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKR 305

Query: 272 ANEYGIWVHVDAAYAGSACICPEFRHY-------LNGIERVDSFSFSPHKWLLSYLDCCC 324
                 ++  D+A+ G     P  R+        L   +       S HK    +     
Sbjct: 306 IGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQ 365

Query: 325 LWVKQPGLLVKALSTDPEYLKN 346
           +  K   +  +    D ++  N
Sbjct: 366 IHKKDSHIKGQLRYCDHKHFNN 387

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A* Length = 371

 Score = 42.0 bits (99), Expect = 3e-04
 Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 9/118 (7%)

Query: 213 ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVA 272
            NI  +P +   +++++P+   + +E   + G V L L            D V+ +A+V 
Sbjct: 115 LNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPD-VKKIAKVC 173

Query: 273 NEYGIWVHVDAAYAGSACICPEFRHYLNGIER-VDSFSFSPHKWLLSYLDCCCLWVKQ 329
           +EY + + V+ AYA            ++  E   D    S HK + +      + +K+
Sbjct: 174 SEYDVPLLVNGAYA-----IGRMP--VSLKEIGADFIVGSGHKSMAASGPIGVMGMKE 224

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	499
4e1o_A	481	HDC, histidine decarboxylase; lyase; HET: PLP PVH;	100.0
3k40_A	475	Aromatic-L-amino-acid decarboxylase; PLP dependent	100.0
3vp6_A	511	Glutamate decarboxylase 1; catalytic loop SWAP, ly	100.0
1js3_A	486	DDC;, DOPA decarboxylase; carbidopa, parkinson'S d	100.0
2okj_A	504	Glutamate decarboxylase 1; PLP-dependent decarboxy	100.0
2jis_A	515	Cysteine sulfinic acid decarboxylase; pyridoxal ph	100.0
2qma_A	497	Diaminobutyrate-pyruvate transaminase and L-2,4- d	100.0
2dgk_A	452	GAD-beta, GADB, glutamate decarboxylase beta; gadb	100.0
3hbx_A	502	GAD 1, glutamate decarboxylase 1; calmodulin-bindi	100.0
3mc6_A	497	Sphingosine-1-phosphate lyase; carboxy-lyase activ	100.0
3mad_A	514	Sphingosine-1-phosphate lyase; carboxy-lyase activ	100.0
3bc8_A	450	O-phosphoseryl-tRNA(SEC) selenium transferase; dis	100.0
3f9t_A	397	TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L	100.0
2z67_A	456	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	100.0
1wyu_B	474	Glycine dehydrogenase subunit 2 (P-protein); alpha	100.0
3hl2_A	501	O-phosphoseryl-tRNA(SEC) selenium transferase; sel	99.97
1wyu_A	438	Glycine dehydrogenase (decarboxylating) subunit 1;	99.97
3nnk_A	411	Ureidoglycine-glyoxylate aminotransferase; PLP-dep	99.97
4hvk_A	382	Probable cysteine desulfurase 2; transferase and I	99.96
3isl_A	416	Purine catabolism protein PUCG; pyridoxalphosphate	99.96
4eb5_A	382	Probable cysteine desulfurase 2; scaffold, transfe	99.96
3kgw_A	393	Alanine-glyoxylate aminotransferase; AAH25799.1, p	99.96
2dr1_A	386	PH1308 protein, 386AA long hypothetical serine ami	99.96
2yrr_A	353	Aminotransferase, class V; structural genomics, NP	99.96
2huf_A	393	Alanine glyoxylate aminotransferase; alpha and bet	99.96
3lvm_A	423	Cysteine desulfurase; structural genomics, montrea	99.96
3zrp_A	384	Serine-pyruvate aminotransferase (AGXT); HET: PLP;	99.96
2z9v_A	392	Aspartate aminotransferase; pyridoxamine, pyruvate	99.95
1iug_A	352	Putative aspartate aminotransferase; wild type, py	99.95
3e9k_A	465	Kynureninase; kynurenine-L-hydrolase, kynurenine h	99.95
3ffr_A	362	Phosphoserine aminotransferase SERC; structural ge	99.95
1vjo_A	393	Alanine--glyoxylate aminotransferase; 17130350, AL	99.95
1t3i_A	420	Probable cysteine desulfurase; PLP-binding enzyme,	99.95
2ch1_A	396	3-hydroxykynurenine transaminase; PLP-enzyme, kynu	99.95
1eg5_A	384	Aminotransferase; PLP-dependent enzymes, iron-sulf	99.95
1kmj_A	406	Selenocysteine lyase; persulfide perselenide NIFS	99.95
3f0h_A	376	Aminotransferase; RER070207000802, structural geno	99.94
3dzz_A	391	Putative pyridoxal 5'-phosphate-dependent C-S LYA;	99.94
1j32_A	388	Aspartate aminotransferase; HET: PLP; 2.10A {Phorm	99.94
3vax_A	400	Putative uncharacterized protein DNDA; desulfurase	99.94
1svv_A	359	Threonine aldolase; structural genomics, structura	99.94
1m32_A	366	2-aminoethylphosphonate-pyruvate aminotransferase;	99.94
3cai_A	406	Possible aminotransferase; RV3778C; 1.80A {Mycobac	99.94
1elu_A	390	L-cysteine/L-cystine C-S lyase; FES cluster biosyn	99.94
1b9h_A	388	AHBA synthase, protein (3-amino-5-hydroxybenzoic a	99.94
2w8t_A	427	SPT, serine palmitoyltransferase; HET: LLP; 1.25A	99.94
1xi9_A	406	Putative transaminase; alanine aminotransferase, s	99.94
2bkw_A	385	Alanine-glyoxylate aminotransferase 1; analine-gly	99.94
2gb3_A	409	Aspartate aminotransferase; TM1698, structural gen	99.93
1v72_A	356	Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2	99.93
4dq6_A	391	Putative pyridoxal phosphate-dependent transferas;	99.93
2e7j_A	371	SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-st	99.93
1gd9_A	389	Aspartate aminotransferase; pyridoxal enzyme, temp	99.93
1c7n_A	399	Cystalysin; transferase, aminotransferase, pyridox	99.93
3tqx_A	399	2-amino-3-ketobutyrate coenzyme A ligase; energy m	99.93
1o4s_A	389	Aspartate aminotransferase; TM1255, structural gen	99.93
1qz9_A	416	Kynureninase; kynurenine, tryptophan, PLP, vitamin	99.93
3l8a_A	421	METC, putative aminotransferase, probable beta-cys	99.93
3nra_A	407	Aspartate aminotransferase; structural genomics, j	99.93
2fnu_A	375	Aminotransferase; protein-product complex, structu	99.93
3kax_A	383	Aminotransferase, classes I and II; PLP, C-S lyase	99.92
2c81_A	418	Glutamine-2-deoxy-scyllo-inosose aminotransferase;	99.92
3dyd_A	427	Tyrosine aminotransferase; PLP, SGC, structural ge	99.92
1d2f_A	390	MALY protein; aminotransferase fold, large PLP-bin	99.92
1fc4_A	401	2-amino-3-ketobutyrate conenzyme A ligase; 2-amino	99.92
3e77_A	377	Phosphoserine aminotransferase; SERC, PLP, structu	99.92
2zc0_A	407	Alanine glyoxylate transaminase; alanine:glyoxylat	99.92
3piu_A	435	1-aminocyclopropane-1-carboxylate synthase; fruit	99.92
3g0t_A	437	Putative aminotransferase; NP_905498.1, putative a	99.92
3a9z_A	432	Selenocysteine lyase; PLP, cytoplasm, pyridoxal ph	99.92
3ke3_A	379	Putative serine-pyruvate aminotransferase; structu	99.92
1u08_A	386	Hypothetical aminotransferase YBDL; alpha beta pro	99.92
3h14_A	391	Aminotransferase, classes I and II; YP_167802.1, S	99.92
3a2b_A	398	Serine palmitoyltransferase; vitamin B6-dependent	99.92
3dr4_A	391	Putative perosamine synthetase; deoxysugar, pyrido	99.92
3frk_A	373	QDTB; aminotransferase, sugar-modification, natura	99.92
2vyc_A	755	Biodegradative arginine decarboxylase; pyridoxal p	99.92
1iay_A	428	ACC synthase 2, 1-aminocyclopropane-1-carboxylate	99.92
1rv3_A	483	Serine hydroxymethyltransferase, cytosolic; one-ca	99.92
3op7_A	375	Aminotransferase class I and II; PLP-dependent tra	99.91
3uwc_A	374	Nucleotide-sugar aminotransferase; lipopolysacchar	99.91
3tcm_A	500	Alanine aminotransferase 2; pyridoxal phosphate (P	99.91
3m5u_A	361	Phosphoserine aminotransferase; alpha-beta half sa	99.91
1b5p_A	385	Protein (aspartate aminotransferase); pyridoxal en	99.91
2o0r_A	411	RV0858C (N-succinyldiaminopimelate aminotransfera;	99.91
3ele_A	398	Amino transferase; RER070207001803, structural gen	99.91
3aow_A	448	Putative uncharacterized protein PH0207; protein-P	99.91
1v2d_A	381	Glutamine aminotransferase; PLP, riken structural	99.91
1vp4_A	425	Aminotransferase, putative; structural genomics, j	99.91
2oga_A	399	Transaminase; PLP-dependent enzyme, desosamine, de	99.91
2x3l_A	446	ORN/Lys/Arg decarboxylase family protein; lyase; H	99.91
1bw0_A	416	TAT, protein (tyrosine aminotransferase); tyrosine	99.91
3ffh_A	363	Histidinol-phosphate aminotransferase; APC88260, l	99.91
1yiz_A	429	Kynurenine aminotransferase; glutamine transaminas	99.91
3euc_A	367	Histidinol-phosphate aminotransferase 2; YP_297314	99.91
2z61_A	370	Probable aspartate aminotransferase 2; amino acid	99.91
3ly1_A	354	Putative histidinol-phosphate aminotransferase; st	99.91
3cq5_A	369	Histidinol-phosphate aminotransferase; PLP, PMP, a	99.91
2fyf_A	398	PSAT, phosphoserine aminotransferase; PLP-dependen	99.9
3get_A	365	Histidinol-phosphate aminotransferase; NP_281508.1	99.9
3fdb_A	377	Beta C-S lyase, putative PLP-dependent beta-cystat	99.9
3ftb_A	361	Histidinol-phosphate aminotransferase; structural	99.9
3kki_A	409	CAI-1 autoinducer synthase; quorum sensing, CQSA,	99.9
2dkj_A	407	Serine hydroxymethyltransferase; PLP dependent enz	99.9
2x5d_A	412	Probable aminotransferase; HET: LLP PLP; 2.25A {Ps	99.9
1mdo_A	393	ARNB aminotransferase; type 1 aminotransferase fol	99.9
1bs0_A	384	Protein (8-amino-7-oxonanoate synthase); PLP-depen	99.9
2zyj_A	397	Alpha-aminodipate aminotransferase; alpha-aminoadi	99.9
1c4k_A	730	Protein (ornithine decarboxylase); lyase; HET: PLP	99.9
2cb1_A	412	O-acetyl homoserine sulfhydrylase; PLP enzyme, lya	99.9
3fvs_A	422	Kynurenine--oxoglutarate transaminase 1; alpha bet	99.9
1o69_A	394	Aminotransferase; structural genomics, unknown fun	99.9
2dou_A	376	Probable N-succinyldiaminopimelate aminotransfera;	99.9
3qm2_A	386	Phosphoserine aminotransferase; structural genomic	99.9
3b8x_A	390	WBDK, pyridoxamine 5-phosphate-dependent dehydrase	99.89
3nyt_A	367	Aminotransferase WBPE; PLP binding, nucleotide-sug	99.89
2bwn_A	401	5-aminolevulinate synthase; tetrapyrrole biosynthe	99.89
3b46_A	447	Aminotransferase BNA3; kynurenine aminotransferase	99.89
2vi8_A	405	Serine hydroxymethyltransferase; SHMT, E53Q, FTHF,	99.89
2po3_A	424	4-dehydrase; external aldimine, PLP, aminotransfer	99.89
2o1b_A	404	Aminotransferase, class I; aminotrasferase; HET: P	99.89
2a7v_A	490	Serine hydroxymethyltransferase; structural genomi	99.89
3ihj_A	498	Alanine aminotransferase 2; helix, structural geno	99.89
2rfv_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate, PL	99.89
3ju7_A	377	Putative PLP-dependent aminotransferase; NP_978343	99.89
1gc0_A	398	Methionine gamma-lyase; pyridoxal-5'-phosphate; HE	99.89
1lc5_A	364	COBD, L-threonine-O-3-phosphate decarboxylase; PLP	99.89
1e5e_A	404	MGL, methionine gamma-lyase; methionine biosynthes	99.88
3ezs_A	376	Aminotransferase ASPB; NP_207418.1, structural gen	99.88
2c0r_A	362	PSAT, phosphoserine aminotransferase; pyridoxal-5'	99.88
1jg8_A	347	L-ALLO-threonine aldolase; glycine biosynthesis, p	99.88
3n0l_A	417	Serine hydroxymethyltransferase; alpha beta class,	99.88
3lws_A	357	Aromatic amino acid beta-eliminating lyase/threoni	99.88
3qhx_A	392	Cystathionine gamma-synthase METB (CGS); structura	99.88
1w23_A	360	Phosphoserine aminotransferase; pyridoxal-5'-phosp	99.88
1ax4_A	467	Tryptophanase; tryptophan biosynthesis, tryptophan	99.88
3jtx_A	396	Aminotransferase; NP_283882.1, structural genomics	99.87
3e2y_A	410	Kynurenine-oxoglutarate transaminase 3; alpha beta	99.87
3hdo_A	360	Histidinol-phosphate aminotransferase; PSI-II, his	99.87
2x5f_A	430	Aspartate_tyrosine_phenylalanine pyridoxal-5' phos	99.87
3p1t_A	337	Putative histidinol-phosphate aminotransferase; PL	99.87
2ez2_A	456	Beta-tyrosinase, tyrosine phenol-lyase; PLP-depend	99.87
3gbx_A	420	Serine hydroxymethyltransferase; structural genomi	99.87
1cs1_A	386	CGS, protein (cystathionine gamma-synthase); lyase	99.87
1fg7_A	356	Histidinol phosphate aminotransferase; HISC, histi	99.87
3pj0_A	359	LMO0305 protein; structural genomics, joint center	99.87
1qgn_A	445	Protein (cystathionine gamma-synthase); methionine	99.87
3ri6_A	430	O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate	99.87
3ecd_A	425	Serine hydroxymethyltransferase 2; ssgcid, decode,	99.86
3qgu_A	449	LL-diaminopimelate aminotransferase; L-lysine, pyr	99.86
3rq1_A	418	Aminotransferase class I and II; structural genomi	99.86
2oqx_A	467	Tryptophanase; lyase, pyridoxal phosphate, tryptop	99.86
3fsl_A	397	Aromatic-amino-acid aminotransferase; tyrosine ami	99.86
3if2_A	444	Aminotransferase; YP_265399.1, structura genomics,	99.86
2r2n_A	425	Kynurenine/alpha-aminoadipate aminotransferase mit	99.86
1pff_A	331	Methionine gamma-lyase; homocysteine; 2.50A {Trich	99.86
1vef_A	395	Acetylornithine/acetyl-lysine aminotransferase; PL	99.85
3b1d_A	392	Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococ	99.76
3bb8_A	437	CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartat	99.85
3acz_A	389	Methionine gamma-lyase; L-methionine; HET: LLP; 1.	99.85
3t18_A	413	Aminotransferase class I and II; PSI-biology, MCSG	99.85
3ei9_A	432	LL-diaminopimelate aminotransferase; lysine biosyn	99.84
4f4e_A	420	Aromatic-amino-acid aminotransferase; ssgcid, stru	99.84
3fkd_A	350	L-threonine-O-3-phosphate decarboxylase; structura	99.84
2fq6_A	415	Cystathionine beta-lyase; protein-inhibitor comple	99.84
3h7f_A	447	Serine hydroxymethyltransferase 1; cytoplasm, one-	99.84
3ruy_A	392	Ornithine aminotransferase; structural genomics, c	99.84
3ndn_A	414	O-succinylhomoserine sulfhydrylase; seattle struct	99.84
2ctz_A	421	O-acetyl-L-homoserine sulfhydrylase; crystal, O-ac	99.84
3g7q_A	417	Valine-pyruvate aminotransferase; NP_462565.1, str	99.84
7aat_A	401	Aspartate aminotransferase; transferase(aminotrans	99.83
2eh6_A	375	Acoat, acetylornithine aminotransferase; ARGD, str	99.83
3n75_A	715	LDC, lysine decarboxylase, inducible; pyridoxal-5'	99.83
3ez1_A	423	Aminotransferase MOCR family; YP_604413.1, struct	99.83
2ord_A	397	Acoat, acetylornithine aminotransferase; TM1785, a	99.83
1n8p_A	393	Cystathionine gamma-lyase; three open alpha/beta s	99.83
1ajs_A	412	Aspartate aminotransferase; PIG, in the presence o	99.83
1sff_A	426	4-aminobutyrate aminotransferase; enzyme complexes	99.83
1yaa_A	412	Aspartate aminotransferase; HET: PLP; 2.05A {Sacch	99.82
3cog_A	403	Cystathionine gamma-lyase; CTH, PLP, propargylglyc	99.82
3ppl_A	427	Aspartate aminotransferase; dimer, PLP-dependent t	99.82
4adb_A	406	Succinylornithine transaminase; transferase, PLP e	99.82
3meb_A	448	Aspartate aminotransferase; pyridoxal PHOS transfe	99.82
3nx3_A	395	Acoat, acetylornithine aminotransferase; csgid, st	99.82
3asa_A	400	LL-diaminopimelate aminotransferase; PLP dependent	99.82
2ay1_A	394	Aroat, aromatic amino acid aminotransferase; HET:	99.82
3dxv_A	439	Alpha-amino-epsilon-caprolactam racemase; fold-TYP	99.81
2pb2_A	420	Acetylornithine/succinyldiaminopimelate aminotran;	99.81
3nmy_A	400	Xometc, cystathionine gamma-lyase-like protein; Cy	99.81
1ibj_A	464	CBL, cystathionine beta-lyase; PLP-dependent enzym	99.81
3d6k_A	422	Putative aminotransferase; APC82464, corynebacteri	99.81
3f6t_A	533	Aspartate aminotransferase; YP_194538.1, STRU geno	99.8
2q7w_A	396	Aspartate aminotransferase; mechanism-based inhibi	99.8
1s0a_A	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.8
1uu1_A	335	Histidinol-phosphate aminotransferase; histidine b	99.8
1z7d_A	433	Ornithine aminotransferase; structural genomics co	99.8
3i4j_A	430	Aminotransferase, class III; structural GENOMICS,N	99.79
2eo5_A	419	419AA long hypothetical aminotransferase; PLP enzy	99.79
3i16_A	427	Aluminum resistance protein; YP_878183.1, carbon-s	99.78
2oat_A	439	Ornithine aminotransferase; 5-fluoromethylornithin	99.78
3jzl_A	409	Putative cystathionine beta-lyase involved in ALU	99.78
2aeu_A	374	Hypothetical protein MJ0158; selenocysteine syntha	99.78
3n5m_A	452	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.78
1zod_A	433	DGD, 2,2-dialkylglycine decarboxylase; pyridoxal,	99.77
3dod_A	448	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.77
4eu1_A	409	Mitochondrial aspartate aminotransferase; ssgcid,	99.77
3tfu_A	457	Adenosylmethionine-8-amino-7-oxononanoate aminotr;	99.77
3a8u_X	449	Omega-amino acid--pyruvate aminotransferase; large	99.77
3hmu_A	472	Aminotransferase, class III; structural genomics,	99.76
4ffc_A	453	4-aminobutyrate aminotransferase (GABT); structura	99.76
4a6r_A	459	Omega transaminase; transferase, PLP-binding enzym	99.76
3hvy_A	427	Cystathionine beta-lyase family protein, YNBB B.S	99.75
3gju_A	460	Putative aminotransferase; pyridoxal phosphate, PL	99.75
3oks_A	451	4-aminobutyrate transaminase; ssgcid, transferase,	99.75
3k28_A	429	Glutamate-1-semialdehyde 2,1-aminomutase 2; biosyn	99.75
3i5t_A	476	Aminotransferase; pyridoxal 5'-phosphate, PSI-2, N	99.75
2cjg_A	449	L-lysine-epsilon aminotransferase; internal aldimi	99.74
3l44_A	434	Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha	99.74
2cy8_A	453	D-phgat, D-phenylglycine aminotransferase; structu	99.72
3ht4_A	431	Aluminum resistance protein; lyase, putative cysta	99.72
3fq8_A	427	Glutamate-1-semialdehyde 2,1-aminomutase; drug res	99.71
1ohv_A	472	4-aminobutyrate aminotransferase; PLP-dependent en	99.71
2epj_A	434	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.71
4e77_A	429	Glutamate-1-semialdehyde 2,1-aminomutase; structur	99.71
3k7y_A	405	Aspartate aminotransferase; aminotrans pyridoxal p	99.69
2zy4_A	546	L-aspartate beta-decarboxylase; pyridoxal 5'-phosp	99.68
3bwn_A	391	AT1G70560, L-tryptophan aminotransferase; auxin sy	99.68
2e7u_A	424	Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzy	99.62
3ou5_A	490	Serine hydroxymethyltransferase, mitochondrial; st	99.6
4h51_A	420	Aspartate aminotransferase; ssgcid, structural gen	99.57
2hox_A	427	ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINA	99.56
4ao9_A	454	Beta-phenylalanine aminotransferase; HET: PLP; 1.5	99.52
4atq_A	456	4-aminobutyrate transaminase; transferase; HET: PL	99.46
2yky_A	465	Beta-transaminase; transferase; HET: PLP SFE; 1.69	99.11
4e3q_A	473	Pyruvate transaminase; aminotransferase, transfera	99.35
4a0g_A	831	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.2

>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.5e-74  Score=602.27  Aligned_cols=467  Identities=42%  Similarity=0.818  Sum_probs=426.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCcccc
Q 010842           14 FKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFF   93 (499)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~   93 (499)
                      +.+||.++||+.+++++|.+++|+++++++||.+..+|++++..++..+|++|.+.+++++++.+.+.++.++|+||+|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~   82 (481)
T 4e1o_A            3 LGSMEPEEYRERGREMVDYICQYLSTVRERRVTPDVQPGYLRAQLPESAPEDPDSWDSIFGDIERIIMPGVVHWQSPHMH   82 (481)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHHHHHSGGGSCSSCCCCTTTTGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTSTTBC
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCee
Confidence            45799999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCcccc---CCCccEEEcCChHHHHHHHH
Q 010842           94 AFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMF---SGTGGGVIQNTTSDSILVTL  170 (499)
Q Consensus        94 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~---~~~~~g~~t~ggt~A~~~al  170 (499)
                      +|+++++++|+++++++.+++|++...|..+|+.+++|+++++|+++++|++..++.   .+.++|++|+|||+||++|+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al  162 (481)
T 4e1o_A           83 AYYPALTSWPSLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIAL  162 (481)
T ss_dssp             SSSCCCCCHHHHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHH
T ss_pred             EeCCCCCCHHHHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999876421   23457899999999999999


Q ss_pred             HHHHHHHHhHhhhh-------c-cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH
Q 010842          171 IAARDRALDAVGAE-------N-MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE  242 (499)
Q Consensus       171 ~~ar~~~~~~~~~~-------g-~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~  242 (499)
                      +++|++...+.+..       | .++.+|++|..+|+|+.+++++.|.   +++.||+++  +++||+++|+++|+++++
T Consensus       163 ~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~---~~~~v~~~~--~~~~d~~~Le~~i~~~~~  237 (481)
T 4e1o_A          163 LAARKNKILEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLV---KMKFLPVDD--NFSLRGEALQKAIEEDKQ  237 (481)
T ss_dssp             HHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTC---EEEEECCCT--TSCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCC---ceEEEEcCC--CCcCCHHHHHHHHHHHHh
Confidence            99998876543221       1 2678999999999999999999999   999999975  469999999999999988


Q ss_pred             cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842          243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC  322 (499)
Q Consensus       243 ~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~  322 (499)
                      +|..|++|++++|+|++|.+|||++|+++|++||+|+|||+|||++.+.+++++....|++.+||+++|+|||+++|++|
T Consensus       238 ~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~  317 (481)
T 4e1o_A          238 RGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDC  317 (481)
T ss_dssp             TTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSC
T ss_pred             CCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCce
Confidence            89999999999999999999999999999999999999999999998888888888889889999999999999999999


Q ss_pred             eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010842          323 CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGF  402 (499)
Q Consensus       323 g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~  402 (499)
                      |+++++++..+.+.+...+.|+.....  ....++.+++++++|+++++++|++++.+|.+|+++++++..++++++.+.
T Consensus       318 g~l~~~~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~  395 (481)
T 4e1o_A          318 TGFWVKDKYKLQQTFSVNPIYLRHANS--GVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESL  395 (481)
T ss_dssp             EEEEESBHHHHHTTTCCCCGGGCCTTT--TTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCHHHHHHHhcCCchhccCccc--CCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998777788888899877542  234677889999999999999999999999999999999999999999999


Q ss_pred             HhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHH
Q 010842          403 VKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAA  482 (499)
Q Consensus       403 L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l  482 (499)
                      |+++|+++++.++.+++++|++.+.        +..+.++.++|.++|.++++++.+.+..++|++++++.+|++||+++
T Consensus       396 L~~~~g~~~~~~~~~~~v~f~~~~~--------~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~  467 (481)
T 4e1o_A          396 VRNDPSFEIPAKRHLGLVVFRLKGP--------NSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTSQFTTRDDILRD  467 (481)
T ss_dssp             HHTCTTEECCSCCCSSEEEEEESSC--------HHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCCTTCCHHHHHHH
T ss_pred             HhcCCCeEEecCCceeEEEEEeCCc--------hHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCCCCCCHHHHHHH
Confidence            9999999998888999999999653        45678899999999988888889999999999999999999999999


Q ss_pred             HHHHHHHHHHHhc
Q 010842          483 WELIMEGADRLFK  495 (499)
Q Consensus       483 ~~~l~~~~~~l~~  495 (499)
                      +++|+++++++++
T Consensus       468 ~~~i~~~~~~l~~  480 (481)
T 4e1o_A          468 WNLIRDAATLILS  480 (481)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999988764

>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6

Probab=100.00  E-value=1.4e-74  Score=600.91  Aligned_cols=465  Identities=43%  Similarity=0.827  Sum_probs=405.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccC
Q 010842           17 LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFF   96 (499)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~   96 (499)
                      ||.++||+.+++++|.+++|+++++++||.+..+|++++..++..+|++|.+.+++++++.+.+.++.++|+||+|+||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~   80 (475)
T 3k40_A            1 MEAPEFKDFAKTMVDFIAEYLENIRERRVLPEVKPGYLKPLIPDAAPEKPEKWQDVMQDIERVIMPGVTHWHSPKFHAYF   80 (475)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCSSCTTCSGGGSCSSCCSSCCCHHHHHHHHHHHTGGGCCCTTCTTBCCSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCCCCCcCceeeC
Confidence            68899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCcccc--CCCccEEEcCChHHHHHHHHHHHH
Q 010842           97 PATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMF--SGTGGGVIQNTTSDSILVTLIAAR  174 (499)
Q Consensus        97 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~--~~~~~g~~t~ggt~A~~~al~~ar  174 (499)
                      ++++.+++++++++.+.+|+|...|..+|..+++|+++++|+++++|++.+++.  .+.++|++|+|||+||++|++++|
T Consensus        81 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar  160 (475)
T 3k40_A           81 PTANSYPAIVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAK  160 (475)
T ss_dssp             CCCCCHHHHHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999875421  223579999999999999999999


Q ss_pred             HHHHhHhhhh-------c-cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCc
Q 010842          175 DRALDAVGAE-------N-MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV  246 (499)
Q Consensus       175 ~~~~~~~~~~-------g-~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~  246 (499)
                      ++...+.+..       | .++.+|++|..+|+|+.+++++.|+   +++.||+++  ++ ||+++|+++|+++++++..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~---~~~~v~~d~--~~-~d~~~L~~~i~~~~~~~~~  234 (475)
T 3k40_A          161 AKKLKEVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGV---KLRSVQSEN--HR-MRGAALEKAIEQDVAEGLI  234 (475)
T ss_dssp             HHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTC---EEEEECCBT--TB-CCHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHHhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCC---ceEEEECCC--CC-cCHHHHHHHHHHHHHCCCc
Confidence            8865542211       1 1467899999999999999999999   999999975  47 9999999999999888888


Q ss_pred             cEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEE
Q 010842          247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLW  326 (499)
Q Consensus       247 p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~  326 (499)
                      |++|++++|+|++|.+||+++|+++|++||+|+|||+|||++.+.+++++..+.+++++||+++|+|||+++|++||+++
T Consensus       235 ~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~  314 (475)
T 3k40_A          235 PFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMW  314 (475)
T ss_dssp             EEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred             cEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEE
Confidence            99999999999999999999999999999999999999999888888888888888899999999999999999999999


Q ss_pred             EeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010842          327 VKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD  406 (499)
Q Consensus       327 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~  406 (499)
                      ++++..+.+.+...+.|+.....  +..+++.+++++++|+++++++|++++.+|.+|+++++++..++++++.+.|+++
T Consensus       315 ~~~~~~l~~~~~~~~~yl~~~~~--~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~  392 (475)
T 3k40_A          315 LKDPSWVVNAFNVDPLYLKHDMQ--GSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVAD  392 (475)
T ss_dssp             ESSGGGC-----------------------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             EeCHHHHHHHhcCCccccCCCcC--CCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99988776777778889876432  2345678899999999999999999999999999999999999999999999999


Q ss_pred             CCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842          407 PRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI  486 (499)
Q Consensus       407 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l  486 (499)
                      |+++++.++.+++++|++.+.        +..+.++.++|.++|.++++++.+.|..++|++++++.+|++||++++++|
T Consensus       393 ~g~~l~~~~~~~iv~f~~~~~--------~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~~~tt~~di~~~~~~i  464 (475)
T 3k40_A          393 SRFELAAEINMGLVCFRLKGS--------NERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICSRFTQSEDMEYSWKEV  464 (475)
T ss_dssp             TTEEESSCCBTTEEEEEESSC--------HHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHH
T ss_pred             CCEEEecCCceEEEEEEeCCc--------hHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCCCCCCHHHHHHHHHHH
Confidence            999999888999999999753        456788999999999988899999999999999999999999999999999


Q ss_pred             HHHHHHHhccC
Q 010842          487 MEGADRLFKGS  497 (499)
Q Consensus       487 ~~~~~~l~~~~  497 (499)
                      +++++++.+++
T Consensus       465 ~~~~~~~~~~~  475 (475)
T 3k40_A          465 SAAADEMEQEQ  475 (475)
T ss_dssp             HHHHHHHHTCC
T ss_pred             HHHHHHHhccC
Confidence            99999988764

>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*

Probab=100.00  E-value=1.1e-68  Score=561.37  Aligned_cols=475  Identities=23%  Similarity=0.376  Sum_probs=418.6

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCChhHHHhc---CCCCCCCCCCCHHHHHHHHHhhhcCCCCC
Q 010842           12 VQFKPLDAQEFRKQAHQMVDFIADYYQNIESY--PVLTQVEPGFLRSA---LPDSAPHRPESFETILKDVQEKIIPGITH   86 (499)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~---~~~~~p~~~~~~~~i~~~~~~~~~~~~~~   86 (499)
                      ..+...+.+++++++++++|.+++|+++..++  +|.+..+|++++..   ++.++|++|.+++++++++.+.+.++ .+
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~   92 (511)
T 3vp6_A           14 LLPAKNGEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYG-VR   92 (511)
T ss_dssp             STTSTTCHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHHCBTTBCCCCCSSCCCHHHHHHHHHHHHHTS-CC
T ss_pred             cCCCCCChHHHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHhhCCCCCCCCCCCHHHHHHHHHHHhhcc-CC
Confidence            44555789999999999999999999998665  46788899999999   88999999999999999999988766 46


Q ss_pred             CCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHH
Q 010842           87 WLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSI  166 (499)
Q Consensus        87 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~  166 (499)
                      ++||+|+||+|+++.+++++++++.+++|++...|..+|+.+++|+++++|+++++|++...     ++|++|+|||+||
T Consensus        93 ~~~p~f~~~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~-----~~~~~t~ggt~a~  167 (511)
T 3vp6_A           93 TGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKD-----GDGIFSPGGAISN  167 (511)
T ss_dssp             TTSTTEESSSSCCCCHHHHHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSS-----CEEEEESSHHHHH
T ss_pred             CCCCCceEeecCCCcHHHHHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCC-----CceEECCchHHHH
Confidence            79999999999999999999999999999999999999999999999999999999998531     3689999999999


Q ss_pred             HHHHHHHHHHHHhHhhhhc---cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHc
Q 010842          167 LVTLIAARDRALDAVGAEN---MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEA  243 (499)
Q Consensus       167 ~~al~~ar~~~~~~~~~~g---~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~  243 (499)
                      ++|+.+++++..++..++|   .++.+|++|..+|+|+.++++++|+|..+++.||++.+  ++||+++|+++|+++.++
T Consensus       168 ~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d~~--~~~d~~~Le~~i~~~~~~  245 (511)
T 3vp6_A          168 MYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNER--GKIIPADFEAKILEAKQK  245 (511)
T ss_dssp             HHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTT--SCBCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecCCC--CccCHHHHHHHHHHHHhc
Confidence            9999999987544333334   36789999999999999999999998888999999854  699999999999999888


Q ss_pred             CCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcce
Q 010842          244 GLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCC  323 (499)
Q Consensus       244 g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g  323 (499)
                      |..|++|++++|+|++|.+|||++|+++|++||+|+|||+||+++.+.+++++..+.|++++||+++|+|||+++|.+||
T Consensus       246 g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g  325 (511)
T 3vp6_A          246 GYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCS  325 (511)
T ss_dssp             TCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCE
T ss_pred             CCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeE
Confidence            99999999999999999999999999999999999999999999999899888888888899999999999999999999


Q ss_pred             EEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q 010842          324 CLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFV  403 (499)
Q Consensus       324 ~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L  403 (499)
                      +++++++..+...+...+.|+...........++.+++++++|+++++++|++++.+|.+|+++++++..++++++++.|
T Consensus       326 ~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L  405 (511)
T 3vp6_A          326 AILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKI  405 (511)
T ss_dssp             EEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999988777778889999987654444556778899999999999999999999999999999999999999999999


Q ss_pred             hcCCCeEEEc--CCCceEEEEEecCCCCCC---c----chhHHHHHHHHHHHHhcCCEEEEeeeECC-EEEEEEeccCCC
Q 010842          404 KSDPRFEIVV--PRHFALVCFRLNPYPHSG---S----ADTEMLNRKLLDWVNSTGRVYLTHTIVGG-LYMLRFAVGASL  473 (499)
Q Consensus       404 ~~~~~~~~~~--~~~~~~v~f~~~~~~~~~---~----~~~~~~~~~l~~~l~~~g~~~~~~~~~~g-~~~lRi~~~~~~  473 (499)
                      ++.|+++++.  +|.+++++|++.|.....   .    ...+..+.++.++|.++|.+++..+...+ ..++|++++|+.
T Consensus       406 ~~~pg~~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRi~~~~~~  485 (511)
T 3vp6_A          406 KNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVISNPA  485 (511)
T ss_dssp             HSCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCCCTT
T ss_pred             hcCCCEEEEecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEeCCceEEEEEEecCCC
Confidence            9999999997  688999999987643100   0    12344567899999999988777666555 468999998999


Q ss_pred             CcHHHHHHHHHHHHHHHHHHh
Q 010842          474 TDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       474 ~t~~di~~l~~~l~~~~~~l~  494 (499)
                      ++++||+.++++|+++++.+-
T Consensus       486 ~t~~di~~ll~~i~~~~~~~~  506 (511)
T 3vp6_A          486 ATQSDIDFLIEEIERLGQDLH  506 (511)
T ss_dssp             CCHHHHHHHHHHHHHHHC---
T ss_pred             CCHHHHHHHHHHHHHHHHhhh
Confidence            999999999999999987653

>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*

Probab=100.00  E-value=5.1e-69  Score=562.25  Aligned_cols=467  Identities=46%  Similarity=0.868  Sum_probs=406.6

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccC
Q 010842           17 LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFF   96 (499)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~   96 (499)
                      ||.++||+++++++|.+++|+++++++||.+..+|++++..++..+|++|.+++++++++.+.+.++..+|+||+|+||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~   80 (486)
T 1js3_A            1 MNASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYF   80 (486)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCCCCTTCSGGGSCSSCCSSCCCHHHHHHHHHHTTGGGCCCTTSTTBCSSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCceEeC
Confidence            68899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCcccc--CCCccEEEcCChHHHHHHHHHHHH
Q 010842           97 PATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMF--SGTGGGVIQNTTSDSILVTLIAAR  174 (499)
Q Consensus        97 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~--~~~~~g~~t~ggt~A~~~al~~ar  174 (499)
                      ++++.+++.+++++.+++|++...|..+|..+++|+++++|+++++|++.++..  .+.++|++|+|||+||++++.++|
T Consensus        81 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~  160 (486)
T 1js3_A           81 PTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAAR  160 (486)
T ss_dssp             CCCCCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999864211  012468999999999999999998


Q ss_pred             HHHHhHhhhh-c-------cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCc
Q 010842          175 DRALDAVGAE-N-------MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV  246 (499)
Q Consensus       175 ~~~~~~~~~~-g-------~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~  246 (499)
                      +...++.+.. |       .++.+|+++..+|+++.++++.+|+   .++.||++.  +++||+++|+++|++++++|..
T Consensus       161 ~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~---~v~~v~~d~--~~~~d~~~L~~~i~~~~~~g~~  235 (486)
T 1js3_A          161 TKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGV---KLKAIPSDG--KFAMRASALQEALERDKAAGLI  235 (486)
T ss_dssp             HHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTC---EEEEECCCT--TSCCCHHHHHHHHHHHHHTTCE
T ss_pred             HHHhhhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCC---ceEEeecCC--CCCCCHHHHHHHHHHHHhCCCC
Confidence            7644321111 1       1245789999999999999999999   999999974  4699999999999999999999


Q ss_pred             cEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEE
Q 010842          247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLW  326 (499)
Q Consensus       247 p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~  326 (499)
                      |++|++++|+|++|.++|+++|+++|++||+|+|||+|||++.+.++++++.+.+++++|++++|+|||+++|++||+++
T Consensus       236 p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~  315 (486)
T 1js3_A          236 PFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMW  315 (486)
T ss_dssp             EEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred             ceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEE
Confidence            99999999999999999999999999999999999999999888788788777788889999999999999999999999


Q ss_pred             EeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010842          327 VKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD  406 (499)
Q Consensus       327 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~  406 (499)
                      ++++..+.+.+...+.|+...........++.+++++++|+++++++|++++.+|.+++++++++..++++++.+.|++.
T Consensus       316 ~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~  395 (486)
T 1js3_A          316 VKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQD  395 (486)
T ss_dssp             ESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             EeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99987666677777888876432222345667788999999999999999999999999999999999999999999999


Q ss_pred             CCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842          407 PRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI  486 (499)
Q Consensus       407 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l  486 (499)
                      |+++++.+|.+++++|++.+.        +..+.++.++|.++|.++++++.+.+..++|++++++.+|++||+++++.|
T Consensus       396 ~~~~~~~~~~~~~v~f~~~~~--------~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l  467 (486)
T 1js3_A          396 PRFEVCAEVTLGLVCFRLKGS--------DGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHI  467 (486)
T ss_dssp             TTEEECSCCCSSEEEEEESSC--------HHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHH
T ss_pred             CCeEEeCCCceeEEEEEecCh--------HHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHHHHHHHH
Confidence            999998878899999998652        345688899999999888888888889999999988999999999999999


Q ss_pred             HHHHHHHhcc
Q 010842          487 MEGADRLFKG  496 (499)
Q Consensus       487 ~~~~~~l~~~  496 (499)
                      +++++++.++
T Consensus       468 ~~~~~~~~~~  477 (486)
T 1js3_A          468 RGLAAELLAA  477 (486)
T ss_dssp             HHHHHHHHC-
T ss_pred             HHHHHHHHhh
Confidence            9998887654

>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*

Probab=100.00  E-value=1.1e-65  Score=539.30  Aligned_cols=477  Identities=23%  Similarity=0.372  Sum_probs=409.4

Q ss_pred             cccCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCC--CCCCCCChhHHHhc---CCCCCCCCCCCHHHHHHHHHhhhcCC
Q 010842            9 AESVQFKPLDAQEFRKQAHQMVDFIADYYQNIESY--PVLTQVEPGFLRSA---LPDSAPHRPESFETILKDVQEKIIPG   83 (499)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~---~~~~~p~~~~~~~~i~~~~~~~~~~~   83 (499)
                      +..+-|..|+.++|++++++++|.+++|++++.++  ||.+..+|++++..   ++.++|++|.+++++++++.+.+.++
T Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~   87 (504)
T 2okj_A            8 ARDLLPAKNGEEQTVQFLLEVVDILLNYVRKTFDRSTKVLDFHHPHQLLEGMEGFNLELSDHPESLEQILVDCRDTLKYG   87 (504)
T ss_dssp             GGGSTTSTTCHHHHHHHHHHHHHHHHHHHHHHTCTTSCSCCCCCHHHHHSCBTTBCCCCCSSCCCHHHHHHHHHHHHHTS
T ss_pred             hccccCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCCHHHHHHHhhccCCCCCCCCCCHHHHHHHHHHHhhcc
Confidence            44566777999999999999999999999998764  48999999999999   89999999999999999998877655


Q ss_pred             CCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH
Q 010842           84 ITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS  163 (499)
Q Consensus        84 ~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt  163 (499)
                      . ++.||+|++|+++++.+++++++++.+++|+|...|..+|..+++|+++++|+++++|++...     +++++|+|||
T Consensus        88 ~-~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~-----~~~~~t~ggt  161 (504)
T 2okj_A           88 V-RTGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKD-----GDGIFSPGGA  161 (504)
T ss_dssp             C-CTTCTTEESSSSCCCCHHHHHHHHHHHHHCCBSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSS-----CEEEEESSHH
T ss_pred             C-CCCCCCEEEEccCCCCHHHHHHHHHHHhhccCCCchhhChHHHHHHHHHHHHHHHHhCCCCCC-----CCEEEeCCcH
Confidence            5 456999999999999999999999999999999999999999999999999999999998411     2689999999


Q ss_pred             HHHHHHHHHHHHHHHhHhhhhcc---CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHH
Q 010842          164 DSILVTLIAARDRALDAVGAENM---HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEAD  240 (499)
Q Consensus       164 ~A~~~al~~ar~~~~~~~~~~g~---~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~  240 (499)
                      +||++++.++|++..+..+..|.   ++.+|++|..+|+++.++++.+|+|.++++.||+++  +++||+++|+++|+++
T Consensus       162 ea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~  239 (504)
T 2okj_A          162 ISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCNE--RGKIIPADFEAKILEA  239 (504)
T ss_dssp             HHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHHcCCCcccEEEEecCC--CCCCCHHHHHHHHHHH
Confidence            99999999998754332222232   255899999999999999999999876899999975  3699999999999998


Q ss_pred             HHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC
Q 010842          241 VEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL  320 (499)
Q Consensus       241 ~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~  320 (499)
                      .++|..|++|++++|+|++|.++|+++|+++|++||+|+|||+||+++.+.+++++..+.+++++|++++|+|||+++|+
T Consensus       240 ~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~  319 (504)
T 2okj_A          240 KQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLL  319 (504)
T ss_dssp             HHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCS
T ss_pred             HHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCc
Confidence            88888899999999999999999999999999999999999999999988888877777788889999999999999999


Q ss_pred             cceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q 010842          321 DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFE  400 (499)
Q Consensus       321 ~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~  400 (499)
                      +||++++|++..+...+...++|+...........++.+++++++||++++++|++++.+|.+|+++++++..++++++.
T Consensus       320 ~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~~~~~~~~~~a~~l~  399 (504)
T 2okj_A          320 QCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLY  399 (504)
T ss_dssp             CCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence            99999999976666667778889876443222335677888999999999999999999999999999999999999999


Q ss_pred             HHHhcCCCeEEEc--CCCceEEEEEecCCCC--C-Cc----chhHHHHHHHHHHHHhcCCEEEEeeeECCE-EEEEEecc
Q 010842          401 GFVKSDPRFEIVV--PRHFALVCFRLNPYPH--S-GS----ADTEMLNRKLLDWVNSTGRVYLTHTIVGGL-YMLRFAVG  470 (499)
Q Consensus       401 ~~L~~~~~~~~~~--~~~~~~v~f~~~~~~~--~-~~----~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~-~~lRi~~~  470 (499)
                      +.|+++|+++++.  +|..++++|++.+...  . +.    ...+..+.++.++|.++|.+++.++.+.+. .++|++++
T Consensus       400 ~~L~~~~~~~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~~~~~~~~lRis~~  479 (504)
T 2okj_A          400 AKIKNREEFEMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGTTMVGYQPQGDKANFFRMVIS  479 (504)
T ss_dssp             HHHTTCTTEEESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEECCC
T ss_pred             HHHhcCCCEEEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhCCcEEEEeeEECCceEEEEEEeC
Confidence            9999999999987  5788999999865310  0 00    011224678889999999888877777765 79999998


Q ss_pred             CCCCcHHHHHHHHHHHHHHHHHH
Q 010842          471 ASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       471 ~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      |+.+|++||++++++|+++++++
T Consensus       480 ~~~~t~edi~~~~~~l~~~~~~~  502 (504)
T 2okj_A          480 NPAATQSDIDFLIEEIERLGQDL  502 (504)
T ss_dssp             CTTCCHHHHHHHHHHHHHHHTC-
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHH
Confidence            89999999999999999987655

>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}

Probab=100.00  E-value=5.4e-64  Score=527.48  Aligned_cols=468  Identities=23%  Similarity=0.334  Sum_probs=395.4

Q ss_pred             CCCCHHHHHHHHHHHHHHHHH-HHHhcCC--CCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCcc
Q 010842           15 KPLDAQEFRKQAHQMVDFIAD-YYQNIES--YPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPN   91 (499)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~   91 (499)
                      .+|+.++|++++++++|.+++ |+++..+  +||.+..+|++++..++.++|++|.+++++++++.+.+.++. ++.||+
T Consensus        32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~p~  110 (515)
T 2jis_A           32 LAGDPVAVEALLRAVFGVVVDEAIQKGTSVSQKVCEWKEPEELKQLLDLELRSQGESQKQILERCRAVIRYSV-KTGHPR  110 (515)
T ss_dssp             CSCCHHHHHHHHHHHHHHHHHHTTTGGGCTTSCSCCCCCHHHHHHHHCCCCCSSCCCHHHHHHHHHHHHHHSC-CTTSTT
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCCCHHHHHhhcccCCCCCCCCHHHHHHHHHHHhcCCC-CCCCCC
Confidence            348999999999999999999 9988764  499999999999999999999999999999999988776665 456999


Q ss_pred             ccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHH
Q 010842           92 FFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLI  171 (499)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~  171 (499)
                      |++|+++++.++++++++++.++|++...|..+|..+++|.++++|+++++|++..       ++++|+|||+||++++.
T Consensus       111 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~~~-------~~~~t~ggtea~~~al~  183 (515)
T 2jis_A          111 FFNQLFSGLDPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWSSG-------DGIFCPGGSISNMYAVN  183 (515)
T ss_dssp             EESSSCCCCCHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCSSC-------EEEEESSHHHHHHHHHH
T ss_pred             eEEEeeCCCCHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCCCC-------CeEEcCCcHHHHHHHHH
Confidence            99999999999999999999989999889999999999999999999999999843       68999999999999999


Q ss_pred             HHHHHHHhHhhhhc---cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccE
Q 010842          172 AARDRALDAVGAEN---MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPL  248 (499)
Q Consensus       172 ~ar~~~~~~~~~~g---~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~  248 (499)
                      ++|++..+..+..|   .++.+|+++..+|+++.++++.+|+|.++++.||++++  +++|+++|+++|+++.++|.+|.
T Consensus       184 ~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~~--~~~d~~~L~~~i~~~~~~g~~~~  261 (515)
T 2jis_A          184 LARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKADER--GKMVPEDLERQIGMAEAEGAVPF  261 (515)
T ss_dssp             HHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCTT--SCBCHHHHHHHHHHHHHTTCEEE
T ss_pred             HHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEecCCC--CcCCHHHHHHHHHHHHhCCCCcE
Confidence            99875432111112   24568999999999999999999998778999999753  69999999999998888888899


Q ss_pred             EEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEe
Q 010842          249 FLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVK  328 (499)
Q Consensus       249 ~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r  328 (499)
                      +|++++|+|++|.++|+++|+++|++||+|+|||+||+++.+.+++++..+.+++++|++++|+|||+++|++||++++|
T Consensus       262 ~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l~~~  341 (515)
T 2jis_A          262 LVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSALLLQ  341 (515)
T ss_dssp             EEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEEES
T ss_pred             EEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEEEEe
Confidence            99999999999999999999999999999999999999998888887777788888999999999999999999999999


Q ss_pred             Cc-hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 010842          329 QP-GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP  407 (499)
Q Consensus       329 ~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~  407 (499)
                      ++ ..+.+.+...++|+.+.........++..++++++||++++++|++++.+|.+|+++++++..++++++.+.|+++|
T Consensus       342 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~  421 (515)
T 2jis_A          342 DTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGLERRIDQAFVLARYLVEEMKKRE  421 (515)
T ss_dssp             CCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred             ChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            98 55556677778898654332223345667788999999999999999999999999999999999999999999999


Q ss_pred             CeEEEcCCCceEEEEEecCCCC-C--Ccc----hhHHHHHHHHHHHHhcCCEEEEeeeECC-EEEEEEeccCCCCcHHHH
Q 010842          408 RFEIVVPRHFALVCFRLNPYPH-S--GSA----DTEMLNRKLLDWVNSTGRVYLTHTIVGG-LYMLRFAVGASLTDERHV  479 (499)
Q Consensus       408 ~~~~~~~~~~~~v~f~~~~~~~-~--~~~----~~~~~~~~l~~~l~~~g~~~~~~~~~~g-~~~lRi~~~~~~~t~~di  479 (499)
                      +++++.+|.++.++|++.+... .  +..    ..+..+..+.+.+.++|.++++.+.+.+ ..++|++++++.+|++||
T Consensus       422 g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi  501 (515)
T 2jis_A          422 GFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADM  501 (515)
T ss_dssp             TEEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHH
T ss_pred             CEEEeCCCCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHH
Confidence            9999988888899998854210 0  011    1223345678889999988877766655 478999997799999999


Q ss_pred             HHHHHHHHHHHHH
Q 010842          480 VAAWELIMEGADR  492 (499)
Q Consensus       480 ~~l~~~l~~~~~~  492 (499)
                      ++++++|++++++
T Consensus       502 d~~~~~l~~~~~~  514 (515)
T 2jis_A          502 DFLLNELERLGQD  514 (515)
T ss_dssp             HHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHhh
Confidence            9999999987654

>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}

Probab=100.00  E-value=6.5e-63  Score=517.30  Aligned_cols=462  Identities=21%  Similarity=0.351  Sum_probs=391.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHHhcCCC-CCCCCCCCHHHHHHHHHhhhcCCCCCCCCcc
Q 010842           13 QFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPD-SAPHRPESFETILKDVQEKIIPGITHWLSPN   91 (499)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~   91 (499)
                      .+.+++.++|++++++++|.+++|+++.+ +| ++..+|++++..++. .+|++|.+.+++++++.+.+.++.++|+||+
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (497)
T 2qma_A           25 HTGELGSAEFASVMSHTTSAMKSVFEQVN-AP-YSGMDPKALEDAINAVDLDNKNAPLKSVIDDVAELVAKNAIFTQHPD  102 (497)
T ss_dssp             CSSTTTTHHHHHHHHHHHHHHHHHHHHCC-SS-SCCCCHHHHHHHHHTCCSSSCCCCHHHHHHHHHHHTTTTSCCTTSTT
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHhhcc-CC-CCCCCHHHHHHhccccCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCC
Confidence            44578999999999999999999999974 45 778889999999886 5899999999999999999999999999999


Q ss_pred             ccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHH
Q 010842           92 FFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLI  171 (499)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~  171 (499)
                      |++|+++++.+++++++++...+|++...|..+|..+++|+++++|+++++|++..      ..+++|+|||+||++++.
T Consensus       103 yl~~~~~~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~------~~~~~t~ggt~a~~~al~  176 (497)
T 2qma_A          103 CIAHLHTPPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEK------ADGIFTSGGTQSNQMGLM  176 (497)
T ss_dssp             BCSSSCCCCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTT------CEEEEESSHHHHHHHHHH
T ss_pred             eeEeCCCCCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCC------CCeEEcCCchHHHHHHHH
Confidence            99999999999999999999999998889999999999999999999999999753      268999999999999999


Q ss_pred             HHHHHHHhH-----hhhhcc----CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH
Q 010842          172 AARDRALDA-----VGAENM----HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE  242 (499)
Q Consensus       172 ~ar~~~~~~-----~~~~g~----~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~  242 (499)
                      ++|++...+     ....|.    ++.+|+++..+|+|+.++++.+|+|.++++.||+++  +++||+++|+++|+++.+
T Consensus       177 ~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~~--~~~~d~~~L~~~i~~~~~  254 (497)
T 2qma_A          177 LARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDANA--DGTMDITKLDEVIAQAKA  254 (497)
T ss_dssp             HHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBCT--TSSBCGGGHHHHHHHHHH
T ss_pred             HHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecCC--CCcCCHHHHHHHHHHHHH
Confidence            998764421     011232    244899999999999999999999776799999975  469999999999998877


Q ss_pred             cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842          243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC  322 (499)
Q Consensus       243 ~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~  322 (499)
                      ++.+|++|++++|+|++|.++|+++|+++|++||+|+|||+||+++...++ ++..+.+++++|++++|+|||+++|++|
T Consensus       255 ~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~-~~~~~~gi~~~D~i~~s~hK~l~~p~~~  333 (497)
T 2qma_A          255 EGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSS-HKSRLKGVERAHSISVDFHKLFYQTISC  333 (497)
T ss_dssp             TTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGST-TGGGGTTGGGCSEEEEETTTTTCCCSSC
T ss_pred             CCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCc-chHhhcCcccCCEEEEcchhccCCCcce
Confidence            787888999999999999999999999999999999999999999887766 6666777878999999999999999999


Q ss_pred             eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010842          323 CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGF  402 (499)
Q Consensus       323 g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~  402 (499)
                      |+++++++..+ +.+...+.|+.....   ...++..++++++|+++++++|++++.+|.+++++++++..++++++.+.
T Consensus       334 G~l~~~~~~~~-~~~~~~~~yl~~~~~---~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~  409 (497)
T 2qma_A          334 GALLVNDKSNF-KFLLHHADYLNREHD---ELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADM  409 (497)
T ss_dssp             EEEEESCGGGG-GGGCC-----------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCHHHH-HHhcCCchhcCCccc---cCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence            99999988654 455556678754321   13456677889999999999999999999999999999999999999999


Q ss_pred             HhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHH
Q 010842          403 VKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAA  482 (499)
Q Consensus       403 L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l  482 (499)
                      |+++|+++++.++..++++|++.+..    ...+.++.++.+.+.++|.+++.++.+.+..++|++++++.+|++||+++
T Consensus       410 L~~~~~~~~~~~~~~~~v~f~~~~~~----~~~~~l~~~l~~~l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~  485 (497)
T 2qma_A          410 IRTNDQFELLAEPSLSTVLFRATHET----ADLDELNKALRLEALTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESL  485 (497)
T ss_dssp             HHTCTTEEECSCCSSSEEEEEECCSS----SCHHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHH
T ss_pred             HhhCCCeEEEcCCCceEEEEEEcCCc----cCHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHH
Confidence            99999999988888899999987532    12345677888999999998888888888899999997899999999999


Q ss_pred             HHHHHHHHHHH
Q 010842          483 WELIMEGADRL  493 (499)
Q Consensus       483 ~~~l~~~~~~l  493 (499)
                      ++.|+++++++
T Consensus       486 ~~~l~~~~~~~  496 (497)
T 2qma_A          486 LSKINMLAVEL  496 (497)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHhh
Confidence            99999988764

>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*

Probab=100.00  E-value=4.8e-49  Score=407.48  Aligned_cols=411  Identities=15%  Similarity=0.194  Sum_probs=320.4

Q ss_pred             hhHHHhcCCCCCCCCCCCHHHHHHHHHhhh-cCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHH
Q 010842           51 PGFLRSALPDSAPHRPESFETILKDVQEKI-IPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTE  129 (499)
Q Consensus        51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~  129 (499)
                      +..++..++.++|++|++.+++++++.+++ .++..+++||+|++..     .+..+.+++..+++.+...|..+|...+
T Consensus         7 ~~~~~~~~~~~lp~~g~~~~~v~~~~~~~~~~~~~~~~~~~~f~~~~-----~~~~v~e~~~~a~~~~~~~~~~~~~~~~   81 (452)
T 2dgk_A            7 KSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTW-----DDENVHKLMDLSINKNWIDKEEYPQSAA   81 (452)
T ss_dssp             --------CCSCCCSCCCHHHHHHHHHHHGGGSCCCTTBCSCCSCCC-----CCHHHHHHHHHTTTCBTTCTTTCHHHHH
T ss_pred             hHHhhhccCCCCCCCCCCHHHHHHHHHHHhcCCCCCccCCCCeeCCC-----chHHHHHHHHHHhccCCCChhhChhHHH
Confidence            445666777889999999999999999988 6777788999998721     1245789999999888888999999999


Q ss_pred             HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccC--CeEEEcCCCCchhHHHHHHH
Q 010842          130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMH--KLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~--~~~i~~s~~~H~s~~ka~~~  207 (499)
                      +|+++++|+++++|++.+..  +.+.+++|+|||+||++++.+++++...+....|.+  +.+|+++. +|+++.++++.
T Consensus        82 l~~~~~~~la~l~g~~~~~~--~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~  158 (452)
T 2dgk_A           82 IDLRCVNMVADLWHAPAPKN--GQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARY  158 (452)
T ss_dssp             HHHHHHHHHHHHTTCCCCTT--SCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCcccc--cCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHH
Confidence            99999999999999976410  002479999999999999999887543322222322  35788898 99999999999


Q ss_pred             hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh------CCEEEe
Q 010842          208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY------GIWVHV  281 (499)
Q Consensus       208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~------~~~lhv  281 (499)
                      +|+   +++.||++++ +|++|+++|+++|+++      +.+|++++|+|++|.++|+++|+++|+++      |+|+||
T Consensus       159 ~G~---~v~~v~~~~~-~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~v  228 (452)
T 2dgk_A          159 WDV---ELREIPMRPG-QLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHI  228 (452)
T ss_dssp             TTC---EEEECCCBTT-BCSCCHHHHHHHCCTT------EEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEE
T ss_pred             cCc---eEEEEecCCC-CCeECHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEE
Confidence            999   9999999862 4799999999999653      46899999999999999999999999996      999999


Q ss_pred             eccccchhc--cCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842          282 DAAYAGSAC--ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD  359 (499)
Q Consensus       282 D~A~g~~~~--~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  359 (499)
                      |+||+++..  ..+..+..+ .++++|++++++|||+++|.++|+++++++..+.+.+...+.|+...         +.+
T Consensus       229 D~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~---------~~~  298 (452)
T 2dgk_A          229 DAASGGFLAPFVAPDIVWDF-RLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQ---------IGT  298 (452)
T ss_dssp             ECTTGGGTHHHHCTTCCCST-TSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCC---------EEE
T ss_pred             EcccHHHHHHhhCccchhhc-CCCCCcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCC---------CCC
Confidence            999998754  233322222 25579999999999999999999999998754434444456676431         123


Q ss_pred             cccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC----CCceEEEEEecCCCCCCcch
Q 010842          360 WQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP----RHFALVCFRLNPYPHSGSAD  434 (499)
Q Consensus       360 ~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~~~  434 (499)
                      ++++++|++ .++++|++++.+|.+++++++++..++++++.+.|+++++++++.+    +.+++++|++.+..   ...
T Consensus       299 ~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~---~~~  375 (452)
T 2dgk_A          299 FAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGE---DPG  375 (452)
T ss_dssp             CCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTC---CCS
T ss_pred             cccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcc---ccc
Confidence            456778887 6789999999999999999999999999999999999999999865    67899999986521   000


Q ss_pred             hHHHHHHHHHHHHhcCCE---EEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          435 TEMLNRKLLDWVNSTGRV---YLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       435 ~~~~~~~l~~~l~~~g~~---~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      .  ...++.++|.++|+.   +..++.+.+..++|++++ ..+|++|+++++++|+++.+++.+
T Consensus       376 ~--~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRis~~-~~~t~e~id~li~~l~~~~~~~~~  436 (452)
T 2dgk_A          376 Y--TLYDLSERLRLRGWQVPAFTLGGEATDIVVMRIMCR-RGFEMDFAELLLEDYKASLKYLSD  436 (452)
T ss_dssp             C--CHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             C--CHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEEEec-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence            0  025678888888973   333444456778999997 556799999999999999887654

>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}

Probab=100.00  E-value=3.7e-46  Score=389.93  Aligned_cols=414  Identities=17%  Similarity=0.187  Sum_probs=331.7

Q ss_pred             CCCChhHHHhcCCC-CCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccCh
Q 010842           47 TQVEPGFLRSALPD-SAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASP  125 (499)
Q Consensus        47 ~~~~~~~l~~~~~~-~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p  125 (499)
                      +...+.+++..++. .+|+.|.+.+++++.+.+.+..    ..+|++......+..++..+.+++..+++.+...|..+|
T Consensus        16 ~~~~~~~~~~~lp~~~~p~~~~~~~~~~~~~~~~i~l----~gnp~~~l~s~~t~~~~~~v~~~l~~~~~~~~~~~~~~p   91 (502)
T 3hbx_A           16 STFASRYVRTSLPRFKMPENSIPKEAAYQIINDELML----DGNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDEYP   91 (502)
T ss_dssp             CTTTSSGGGSCCCSSSCCSSCCCHHHHHHHHHHHGGG----SCCGGGBTTCCSCCCCCHHHHHHHHHTTTCBTTCTTTCH
T ss_pred             ccccchhhhhhccCCCCCCCCCCHHHHHHHHHHHhcc----CCCCCceeccccCCCCCHHHHHHHHHHhccCCCChhcCh
Confidence            34467889999987 8999999999999999987743    257775432222233445678888899998888889999


Q ss_pred             hhHHHHHHHHHHHHHHcCCC--CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc--CCeEEEcCCCCchhH
Q 010842          126 ASTELEIVVMDWLATMLKLP--KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM--HKLVVYGSDQTHSTF  201 (499)
Q Consensus       126 ~~~~lE~~~~~~la~l~g~~--~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~--~~~~i~~s~~~H~s~  201 (499)
                      ...++|+++++|+++++|++  .+.    ...|++|+|||+||++++.+++.+..++.+.+|.  .++.|+++..+|+++
T Consensus        92 ~~~~le~~~~~~la~l~g~~~~~~~----~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~  167 (502)
T 3hbx_A           92 VTTELQNRCVNMIAHLFNAPLEEAE----TAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCW  167 (502)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCSSC----CCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHH
T ss_pred             hHHHHHHHHHHHHHHHhCCCccccc----CCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHH
Confidence            99999999999999999998  221    1257889999999999999988765543333332  345899999999999


Q ss_pred             HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh------
Q 010842          202 AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY------  275 (499)
Q Consensus       202 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~------  275 (499)
                      .++++++|+   .++.||++++ ++++|+++|+++|+++      |.+|+++.++|++|.++|+++|+++|+++      
T Consensus       168 ~~~~~~~G~---~~~~v~~~~~-~~~~d~~~l~~~i~~~------t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~  237 (502)
T 3hbx_A          168 EKFARYFEV---ELKEVKLSEG-YYVMDPQQAVDMVDEN------TICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGW  237 (502)
T ss_dssp             HHHHHHTTC---EEEEECCBTT-BCSCCHHHHHHHCCTT------EEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCC
T ss_pred             HHHHHHcCc---eeEEEecCCC-cCcCCHHHHHHHHhhC------CEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCC
Confidence            999999999   9999999864 3799999999998764      56899999999999999999999999999      


Q ss_pred             CCEEEeeccccchhc--cCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842          276 GIWVHVDAAYAGSAC--ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS  353 (499)
Q Consensus       276 ~~~lhvD~A~g~~~~--~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~  353 (499)
                      |+|+|||+||+++..  ..+..+..+ .+.++|++++++|||+++|.++|+++++++..+...+...+.|+....     
T Consensus       238 ~~~l~VD~A~~~~~~p~~~~~~~~~~-~~~~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~-----  311 (502)
T 3hbx_A          238 DTPIHVDAASGGFIAPFLYPELEWDF-RLPLVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQ-----  311 (502)
T ss_dssp             CCCEEEECTTGGGTHHHHCTTCCCST-TSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCE-----
T ss_pred             CCeEEEECCccchhhhhhCccccccc-CCCCceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCC-----
Confidence            999999999997753  244443322 256799999999999999999999999987766555666677876532     


Q ss_pred             cccCCCcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCC
Q 010842          354 VVDFKDWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSG  431 (499)
Q Consensus       354 ~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~  431 (499)
                          ..+++.++|+. .++++|++++.+|.+++++++++..+++++|.+.|+++++++++.+ +..++++|++.+..   
T Consensus       312 ----~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~---  384 (502)
T 3hbx_A          312 ----PTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFNIVSKDEGVPLVAFSLKDSS---  384 (502)
T ss_dssp             ----EECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEECSCSSSSSEEEEEESSCS---
T ss_pred             ----CCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCCCceEEEEEecCCC---
Confidence                23456677776 5789999999999999999999999999999999999988999876 78999999996531   


Q ss_pred             cchhHHHHHHHHHHHHhcCCEEEE---eeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842          432 SADTEMLNRKLLDWVNSTGRVYLT---HTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       432 ~~~~~~~~~~l~~~l~~~g~~~~~---~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~  496 (499)
                          .....++.++|.++|+++..   +....+..++|++++ ..+|++|++.+++.|+++.+++.+.
T Consensus       385 ----~~~~~~l~~~L~~~Gi~v~~~~~p~~~~~~~~lRisv~-~~~t~edid~li~~L~~~l~~l~~~  447 (502)
T 3hbx_A          385 ----CHTEFEISDMLRRYGWIVPAYTMPPNAQHITVLRVVIR-EDFSRTLAERLVIDIEKVMRELDEL  447 (502)
T ss_dssp             ----SCCHHHHHHHHHTTTCBCCEEECCTTCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred             ----cCCHHHHHHHHHhCCcEEeeccCCcccCCceEEEEEeC-CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence                00134788888899976422   333456688999995 8899999999999999998877554

>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.9e-41  Score=352.45  Aligned_cols=392  Identities=14%  Similarity=0.204  Sum_probs=305.2

Q ss_pred             CCCCCCCCCCHHHHHHHHHhhhcC-CCCCCCCccccccCCCCC-ChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHH
Q 010842           59 PDSAPHRPESFETILKDVQEKIIP-GITHWLSPNFFAFFPATV-STAGFLGEMLCACFNSVGFNWLASPASTELEIVVMD  136 (499)
Q Consensus        59 ~~~~p~~~~~~~~i~~~~~~~~~~-~~~~~~~p~~~~~~~~~~-~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~  136 (499)
                      ...+|++|.+.+++++++.++... +...|.+|+|+|+++.++ .....+.+.+....+.+...|..+|+..++|+++.+
T Consensus        35 ~~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  114 (497)
T 3mc6_A           35 FPQLPSNGIPQDDVIEELNKLNDLIPHTQWKEGKVSGAVYHGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVS  114 (497)
T ss_dssp             CSSCCSSCCCHHHHHHHHHHHHHSSCCCCGGGTCBSSSCSCCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCCCCHHHHHHHHHHHhhhcCCCCCCCCCEeeecCCCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHH
Confidence            357899999999999999998753 567889999999875543 344555566666555577788899999999999999


Q ss_pred             HHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeE
Q 010842          137 WLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIR  216 (499)
Q Consensus       137 ~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~  216 (499)
                      |+++++|++...     ..+++++|||+|+.+++.++++.....   .|.++.+|+++..+|.++.++++.+|+   +++
T Consensus       115 ~la~~~g~~~~~-----~~~~~~~ggt~a~~~a~~a~~~~~~~~---~g~~~~~Vi~~~~~h~~~~~~~~~~G~---~~~  183 (497)
T 3mc6_A          115 MVLRMFNAPSDT-----GCGTTTSGGTESLLLACLSAKMYALHH---RGITEPEIIAPVTAHAGFDKAAYYFGM---KLR  183 (497)
T ss_dssp             HHHHHTTCCTTT-----CCEEEESSHHHHHHHHHHHHHHHHHHH---SCCSSCEEEEETTSCHHHHHHHHHSCC---EEE
T ss_pred             HHHHHhCCCCCC-----CeEEEcCcHHHHHHHHHHHHHHHHHhc---CCCCCceEEEeCCccHHHHHHHHHcCC---eEE
Confidence            999999998211     257999999999999999998754332   244456899999999999999999999   999


Q ss_pred             EeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhcc-----
Q 010842          217 ALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACI-----  291 (499)
Q Consensus       217 ~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~-----  291 (499)
                      .||++++ ++++|+++|+++|+++      +.+|+++.++|++|.++|+++|+++|++||+|+|||+||+++...     
T Consensus       184 ~v~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~  256 (497)
T 3mc6_A          184 HVELDPT-TYQVDLGKVKKFINKN------TVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKA  256 (497)
T ss_dssp             EECBCTT-TCSBCTTTTGGGCCSS------EEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTT
T ss_pred             EEecCcc-cCcCCHHHHHHHHhhC------CEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhh
Confidence            9999862 4699999999998653      568999999999999999999999999999999999999976542     


Q ss_pred             ----CccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842          292 ----CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR  367 (499)
Q Consensus       292 ----~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~  367 (499)
                          .|.+..   ...++|++++++|||+++|.++|+++++++......+...+.|....         +...++. +++
T Consensus       257 ~~~~~~~~~~---~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~-g~~  323 (497)
T 3mc6_A          257 GYKNLPLLDF---RVPGVTSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTGGL---------YGSPTLA-GSR  323 (497)
T ss_dssp             TCCSCCCCST---TSTTCCEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTTSC---------BCCSSSC-SSC
T ss_pred             cccCCccccc---cCCCCcEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccCCC---------cCCcCcc-cCC
Confidence                111221   22358999999999999999999999988654322122222232221         1122333 344


Q ss_pred             CC--cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHH
Q 010842          368 FK--SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLD  444 (499)
Q Consensus       368 ~~--al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~  444 (499)
                      +.  .+.+|++++.++.+++++++++..++++++.+.|++ +|+++++.++..++++|+.....          ..++.+
T Consensus       324 ~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~~v~~~~~~~~----------~~~l~~  393 (497)
T 3mc6_A          324 PGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYSVISFSSKTLN----------IHELSD  393 (497)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSSEEEEECTTTT----------HHHHHH
T ss_pred             cchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCeeEEEEeCCCCC----------HHHHHH
Confidence            44  456999999999999999999999999999999999 79999988888899999764322          467888


Q ss_pred             HHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842          445 WVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       445 ~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~  496 (499)
                      .|.++|+.+...   .....+|++++  .+|++|+++++++|+++.+++.+.
T Consensus       394 ~L~~~Gi~v~~~---~~~~~~ri~~~--~~t~e~i~~~~~~L~~~l~~~~~~  440 (497)
T 3mc6_A          394 RLSKKGWHFNAL---QKPVALHMAFT--RLSAHVVDEICDILRTTVQELKSE  440 (497)
T ss_dssp             HHHTTTCBCEEC---CSSCCEEEECC--TTTTCTHHHHHHHHHHHHHHHTCC
T ss_pred             HHHhCCEEEecC---CCCCeEEEEEe--CCCHHHHHHHHHHHHHHHHHHHhC
Confidence            888889644221   22235899985  578999999999999998877543

>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*

Probab=100.00  E-value=1.3e-40  Score=349.85  Aligned_cols=391  Identities=17%  Similarity=0.173  Sum_probs=310.0

Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCC-CCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHH
Q 010842           60 DSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPA-TVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWL  138 (499)
Q Consensus        60 ~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~l  138 (499)
                      ..+|++|.+.+++++++.+.+.++...|.+|+|+|++.. .+..+..+.+.+....+.+...+..+|...++|.++.+|+
T Consensus        69 ~~lp~~g~~~~~i~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~l  148 (514)
T 3mad_A           69 ARLPRAGLPRAEILAEIAAMGAAESPAWRDGYASGAVYHGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMT  148 (514)
T ss_dssp             SSCCSSCCCHHHHHHHHHHHHHHHHHHHHTTCBSSSCSCCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHhccCCCCCCCceEEEecCCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHH
Confidence            567899999999999999988888888999999998754 4556778888888888888888889999999999999999


Q ss_pred             HHHcCCCC---ccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCe
Q 010842          139 ATMLKLPK---TFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANI  215 (499)
Q Consensus       139 a~l~g~~~---~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v  215 (499)
                      ++++|++.   .      .+|++|+|||+||..++.++++.....   .|.++.+|+++..+|.++.++++.+|+   ++
T Consensus       149 a~~~g~~~~~~~------v~~~~t~ggt~a~~~al~a~~~~g~~~---~g~~~d~Vi~~~~~~~~~~~~~~~~G~---~v  216 (514)
T 3mad_A          149 AHMLGGDAAGGT------VCGTVTSGGTESLLLAMKTYRDWARAT---KGITAPEAVVPVSAHAAFDKAAQYFGI---KL  216 (514)
T ss_dssp             HHHTTGGGGTSC------CEEEEESSHHHHHHHHHHHHHHHHHHH---HCCSSCEEEEETTSCTHHHHHHHHHTC---EE
T ss_pred             HHHcCCCCccCC------cceEEcCcHHHHHHHHHHHHHHHhhhh---cCCCCCeEEEeCccchHHHHHHHHcCC---ee
Confidence            99999973   3      256999999999999999998754322   234557899999999999999999999   99


Q ss_pred             EEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhcc----
Q 010842          216 RALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACI----  291 (499)
Q Consensus       216 ~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~----  291 (499)
                      +.||+++  ++++|+++|+++|+++      +.+|+++.++|++|.++|+++|+++|++||+|+|+|+||+++...    
T Consensus       217 ~~v~~~~--~~~~d~~~Le~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~  288 (514)
T 3mad_A          217 VRTPLDA--DYRADVAAMREAITPN------TVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAER  288 (514)
T ss_dssp             EEECBCT--TSCBCHHHHHHHCCTT------EEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHH
T ss_pred             EEeeeCC--CCCCCHHHHHHHhccC------CEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHh
Confidence            9999986  4699999999998653      458999999999999999999999999999999999999987542    


Q ss_pred             ----CccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC
Q 010842          292 ----CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR  367 (499)
Q Consensus       292 ----~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~  367 (499)
                          .+.+..   ...++|++++++|||+++|.++|+++++++......+.....|..+         .+...++.+++.
T Consensus       289 ~g~~~~~~~~---~~~g~d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~gs~~  356 (514)
T 3mad_A          289 LGYPVPPFDF---RLEGVTSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFIAADWPGG---------LYFSPTFAGSRP  356 (514)
T ss_dssp             TTCCCCCCST---TSTTCCEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEEESSCTTC---------SEEESSSCSSCC
T ss_pred             cCCCCCcccc---cCCCCcEEEECchhccCCCCCeEEEEEeCHHHhccccccccccCCC---------cccCCccCCCCc
Confidence                111111   2335899999999999999999999999875432111111122111         111223344444


Q ss_pred             CC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHH
Q 010842          368 FK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWV  446 (499)
Q Consensus       368 ~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l  446 (499)
                      .. .+++|++++.++.+++++++++..++++++.+.|+++|+++++.++. ++++|......          ..++.++|
T Consensus       357 ~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~-~~~~~~~~~~~----------~~~l~~~L  425 (514)
T 3mad_A          357 GALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKILGDPL-WVIAVASDELN----------IYQVMEEM  425 (514)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEESSCCS-SEEEEECSSSC----------HHHHHHHH
T ss_pred             hHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEeCCCe-EEEEEeCCCCC----------HHHHHHHH
Confidence            43 57899999999999999999999999999999999999999886654 56777653322          45678888


Q ss_pred             HhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842          447 NSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       447 ~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~  496 (499)
                      .++|+.+ .+.  ....++|++++++.+++++|++++++|+++.+++.+.
T Consensus       426 ~~~Gi~v-~g~--~~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~~  472 (514)
T 3mad_A          426 AGRGWRL-NGL--HRPPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRAH  472 (514)
T ss_dssp             HTTTCBC-EEE--TTTTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHHC
T ss_pred             HhcCCEe-ccC--CCCCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            8889654 322  2234699999878888899999999999999887644

>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*

Probab=100.00  E-value=4e-39  Score=324.74  Aligned_cols=380  Identities=13%  Similarity=0.094  Sum_probs=269.8

Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCCCCCC-----------------CCccccccCCCCCChHHHHHHHHHHHcccCCcccc
Q 010842           60 DSAPHRPESFETILKDVQEKIIPGITHW-----------------LSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWL  122 (499)
Q Consensus        60 ~~~p~~~~~~~~i~~~~~~~~~~~~~~~-----------------~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~  122 (499)
                      ..+|++|.+.++|...|.++-..+..+|                 ..||||||+++.    +..+|++..    |. .|.
T Consensus        21 ~~~p~~g~~~~~i~~~l~~~~~~d~~~~~~~~~~geregrv~~~~~~~r~~g~~hg~----~~~~d~l~~----~~-~~~   91 (450)
T 3bc8_A           21 GKCPEDGWDESTLELFLHELAVMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGI----GRSGDISAV----QP-KAA   91 (450)
T ss_dssp             CCCCSSCCCHHHHHHHHHHHHHTBGGGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCB----CC-----------CC-SBH
T ss_pred             ccCCccCCCHHHHHHHHHHHhhCCCCccccccccCcccceEecccccCCccceecch----hHHHHHHHh----Cc-ccc
Confidence            4689999999999998887654444444                 247999999886    455677776    33 788


Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH-HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS-DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF  201 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt-~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~  201 (499)
                      .+|+...+|+++..|+.+++|+|..+      ++++++|+| +++.++|.++|....        ++..|++++.+|.|+
T Consensus        92 ~~~~~~~~e~~~~~~~~~~lGlp~~~------~~~lV~GaT~~~~a~~L~aar~~~~--------~~~~viv~r~aHkSv  157 (450)
T 3bc8_A           92 GSSLLNKITNSLVLNVIKLAGVHSVA------SCFVVPMATGMSLTLCFLTLRHKRP--------KAKYIIWPRIDQKSC  157 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCTTCC------EEEEESSCHHHHHHHHHHHHHHHCT--------TCCEEEEECCCCHHH
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCc------eEEEECCHHHHHHHHHHHHcchhhc--------CCCEEEEECCcHHHH
Confidence            89999999999999999999999874      568999998 888888888887421        234567778899999


Q ss_pred             HHHHHHhCCCCCCeEEeeCCC-CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842          202 AKVCKLAGVSPANIRALPTSV-DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH  280 (499)
Q Consensus       202 ~ka~~~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh  280 (499)
                      .|++.++|+   .++.|+... +..+.||+++|+++|+++..  ..+++|+.+.+++.+|++|||++|+++|++||+|+|
T Consensus       158 ~kAl~l~Gl---~p~~v~~~~~~~~~~id~~~le~aI~~~~~--~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~  232 (450)
T 3bc8_A          158 FKSMVTAGF---EPVVIENVLEGDELRTDLKAVEAKIQELGP--EHILCLHSTTACFAPRVPDRLEELAVICANYDIPHV  232 (450)
T ss_dssp             HHHHHHTTC---EEEEECCEEETTEEECCHHHHHHHHHHHCG--GGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEE
T ss_pred             HHHHHHcCC---eeEEEEeeecCccCCcCHHHHHHHHHhcCC--CCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEE
Confidence            999999999   666665421 12479999999999988642  246778888777778899999999999999999999


Q ss_pred             eeccccchhccCccchhhhcCC--CCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842          281 VDAAYAGSACICPEFRHYLNGI--ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK  358 (499)
Q Consensus       281 vD~A~g~~~~~~~~~~~~~~g~--~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  358 (499)
                      ||+|||+...+.++...  .++  ++||+++.|+|||+.+|++++++++|+++.+.+..   ..|....           
T Consensus       233 VD~A~G~~~~~~~~l~~--~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~---~~~~g~~-----------  296 (450)
T 3bc8_A          233 VNNAYGLQSSKCMHLIQ--QGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDIS---KMYPGRA-----------  296 (450)
T ss_dssp             EECTTTTTCHHHHHHHH--HHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHH---HHSCSCB-----------
T ss_pred             EECCCchhhhhhHhHHH--HHhcccCCCEEEECCccCCCchhccEEEEecCHHHHHHHH---HHhhcCC-----------
Confidence            99999986543322111  222  57999999999999999999999999887664432   2233111           


Q ss_pred             CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEEcCCCce-EEEEEecCCCCCCcch
Q 010842          359 DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP---RFEIVVPRHFA-LVCFRLNPYPHSGSAD  434 (499)
Q Consensus       359 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~-~v~f~~~~~~~~~~~~  434 (499)
                           .+  ..++.+|++++.+|.+++++.+++..++++++++.|++++   +++++..+..+ ..++.+....  ...+
T Consensus       297 -----s~--SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~--~~~~  367 (450)
T 3bc8_A          297 -----SA--SPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTID--GHHD  367 (450)
T ss_dssp             -----CS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTS--SSSS
T ss_pred             -----cc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeeccccc--cccc
Confidence                 00  1259999999999999999999999999999999999988   88887644322 2233232110  0000


Q ss_pred             hHHHHHHHHHHHHhc---CCEEEEe--------ee---------ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          435 TEMLNRKLLDWVNST---GRVYLTH--------TI---------VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       435 ~~~~~~~l~~~l~~~---g~~~~~~--------~~---------~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      .+  ..+|.-.+...   |.-+..+        ..         .....++=+.+ ....+++|+++++++|+++.+++.
T Consensus       368 ~D--~tkl~i~~~~~g~sG~~v~~~~~~~~~~~~~l~~~gi~~E~~~~~~i~~~~-sig~~~~di~~l~~~L~~~~~~~~  444 (450)
T 3bc8_A          368 KA--VTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAA-AIGMKMQDVDLFIKRLDKCLNIVR  444 (450)
T ss_dssp             CH--HHHHHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEEC-CTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CC--CceeEEEecCCCCccceeeecccccchhHHHHHHcCCeeecCCCCcEEEEe-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence            11  22333333333   3322200        00         11223454454 478999999999999999877664


Q ss_pred             c
Q 010842          495 K  495 (499)
Q Consensus       495 ~  495 (499)
                      +
T Consensus       445 ~  445 (450)
T 3bc8_A          445 K  445 (450)
T ss_dssp             H
T ss_pred             h
Confidence            4

>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}

Probab=100.00  E-value=1.9e-35  Score=299.23  Aligned_cols=382  Identities=17%  Similarity=0.169  Sum_probs=290.9

Q ss_pred             CCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHH
Q 010842           61 SAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLAT  140 (499)
Q Consensus        61 ~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~  140 (499)
                      .+|+.|.+.+++++.+.+.. +....+.+|+|+|+.++++.+ . +.+.+...+..+...+...|...+++.++.+|+++
T Consensus         4 ~lp~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~-~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~   80 (397)
T 3f9t_A            4 NMQEKGVSEKEILEELKKYR-SLDLKYEDGNIFGSMCSNVLP-I-TRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGS   80 (397)
T ss_dssp             SCCSSCCCHHHHHHHHHHHH-TTSCCGGGTCBCSCSCCCCCT-H-HHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCeEEEecCCCcH-H-HHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHH
Confidence            57899999999999999865 555667899999999765543 3 45666666665444455567889999999999999


Q ss_pred             HcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh--hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEe
Q 010842          141 MLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV--GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRAL  218 (499)
Q Consensus       141 l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~--~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v  218 (499)
                      ++|.+.+       .+++|+|||+|+..++.+++.......  +..+.++..|+++..+|+++.++++..|+   +++.|
T Consensus        81 ~~~~~~~-------~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v  150 (397)
T 3f9t_A           81 LLNNKDA-------YGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFEKGREMMDL---EYIYA  150 (397)
T ss_dssp             HTTCTTC-------EEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHHHHHHHHTC---EEEEE
T ss_pred             HhCCCCC-------CEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHHHHHHHcCc---eeEEE
Confidence            9999765       469999999999999998876422110  00111467899999999999999999999   99999


Q ss_pred             eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccch--
Q 010842          219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFR--  296 (499)
Q Consensus       219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~--  296 (499)
                      |++++  +.+|+++|++++++.     .+.+|+++.++|++|.+.|+++|.++|++||+|+|+|++|+++.+......  
T Consensus       151 ~~~~~--~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~  223 (397)
T 3f9t_A          151 PIKED--YTIDEKFVKDAVEDY-----DVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYK  223 (397)
T ss_dssp             CBCTT--SSBCHHHHHHHHHHS-----CCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGC
T ss_pred             eeCCC--CcCCHHHHHHHHhhc-----CCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccc
Confidence            99864  699999999999872     134788899999999999999999999999999999999987654211100  


Q ss_pred             ------hhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-C
Q 010842          297 ------HYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-K  369 (499)
Q Consensus       297 ------~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~  369 (499)
                            ...... .+|++++++||+++.|.++|+++++++... +.+....+|+....          .....+++.. .
T Consensus       224 ~~~~~~~~~~~~-~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~----------~~~~~~~~~~~~  291 (397)
T 3f9t_A          224 KKGVNYKFDFSL-GVDSITIDPHKMGHCPIPSGGILFKDIGYK-RYLDVDAPYLTETR----------QATILGTRVGFG  291 (397)
T ss_dssp             CTTCCCCCSGGG-TCSEEECCTTTTTCCCSSCEEEEESSGGGG-GGTCEECTTSSSSE----------ECSSCSSCCSHH
T ss_pred             cccccccccccc-cCCeEEEccccccCCCCCceEEEEeCHHHH-HhhccCCccccCCC----------ccccccccccch
Confidence                  000112 589999999999999999999999887543 33333344544321          0112233332 4


Q ss_pred             cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc
Q 010842          370 SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST  449 (499)
Q Consensus       370 al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~  449 (499)
                      .+.+|+++..++..+++++.++..++++++.+.|++. +++++.++..++++|....            ..++.+.|.++
T Consensus       292 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~~  358 (397)
T 3f9t_A          292 GACTYAVLRYLGREGQRKIVNECMENTLYLYKKLKEN-NFKPVIEPILNIVAIEDED------------YKEVCKKLRDR  358 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCCSSSEEEEECTT------------HHHHHHHHHHT
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEcCCCccEEEEEeCC------------HHHHHHHHHhC
Confidence            5788889998888999999999999999999999998 8887777888888887643            35677888888


Q ss_pred             CCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          450 GRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       450 g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      |+.+ .+..  ...++|+++. ..+|++|+++++++|+++.+
T Consensus       359 gi~v-~~~~--~~~~~Ri~~~-~~~~~e~i~~~~~~l~~~l~  396 (397)
T 3f9t_A          359 GIYV-SVCN--CVKALRIVVM-PHIKREHIDNFIEILNSIKR  396 (397)
T ss_dssp             TCBC-EECS--SSSEEEEECC-TTCCHHHHHHHHHHHHHHC-
T ss_pred             CeEE-eccC--CCCEEEEEEc-CCCCHHHHHHHHHHHHHhhC
Confidence            8643 3322  2367999995 78899999999999988753

>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9

Probab=100.00  E-value=1.3e-36  Score=314.47  Aligned_cols=398  Identities=12%  Similarity=0.083  Sum_probs=279.3

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCcccc
Q 010842           14 FKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFF   93 (499)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~   93 (499)
                      .+.+-++.|.+.+.++++...++++.+-.                ...+|++|.+.+++.+.+.+....+.     ..|+
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~lp~~g~~~~~i~~~~~~~~~~~~-----~~yl   84 (456)
T 2z67_A           26 IEGLIPKNMEKRGELVLNEYLKEIEDVFN----------------HRKIPENGIDDEKIKLFLKFLSMMDT-----DKDP   84 (456)
T ss_dssp             CCSSSCHHHHHHHHHHHHHHTHHHHHHHH----------------HCSCCSSCCCHHHHHHHHHHHHTTBG-----GGCT
T ss_pred             hhccCcHHHHHHHHHHHHHHHHHHHHhhc----------------cCCCCCCCCCHHHHHHHHHHHHhccc-----cccc
Confidence            33444688899999988877777665421                13578889998888887776543322     1233


Q ss_pred             ccCCCCCChHHHHHHHHH--------------HHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEc
Q 010842           94 AFFPATVSTAGFLGEMLC--------------ACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQ  159 (499)
Q Consensus        94 ~~~~~~~~~~~~~~~~l~--------------~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t  159 (499)
                      .+...++.++.++..+..              ..+..|. .|..+|...++++++++|+++++|++..        +++|
T Consensus        85 d~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~g~~~~--------~~~t  155 (456)
T 2z67_A           85 KSVRIGEREARTYSKIHEELSSGFCHGIGRSGNLVDPQP-KASGASIMYALTNKILESFFKQLGLNVH--------AIAT  155 (456)
T ss_dssp             TCEECSSCCCCCSCHHHHHHTTTCTTCBSBTTBTTSCCT-TBHHHHHHHHHHHHHHHHHHHHTTCCCE--------EEEE
T ss_pred             cccccccccccccccccCccccccCCCccHHHHHHhhCc-ccccCcHHHHHHHHHHHHHHHHcCCCCC--------EEEe
Confidence            333222222222211111              1111222 4566778899999999999999999753        5999


Q ss_pred             CChH-HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC-CCCCccCHHHHHHHH
Q 010842          160 NTTS-DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV-DANFSLSPQLLRRAV  237 (499)
Q Consensus       160 ~ggt-~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~~i  237 (499)
                      +||| ++|+.++.+++...         ++.+|+++..+|+++.++++..|+   +++.||+.+ ++++.+|+++|+++|
T Consensus       156 ~g~te~a~~~al~~~~~~~---------~~~~vi~~~~~h~s~~~~~~~~G~---~~~~v~~~~~~~~~~~d~~~l~~~i  223 (456)
T 2z67_A          156 PISTGMSISLCLSAARKKY---------GSNVVIYPYASHKSPIKAVSFVGM---NMRLVETVLDGDRVYVPVEDIENAI  223 (456)
T ss_dssp             SSCHHHHHHHHHHHHHHHH---------CCCEEEEECCCCHHHHHHHHHTTC---EEEEECCEEETTEEECCHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHhc---------CCCEEEEECCCcHHHHHHHHHcCC---CceEEEEeccCCCCCcCHHHHHHHH
Confidence            9999 67777888766432         234566677799999999999999   899888731 234799999999999


Q ss_pred             HHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhc-cCccchhhhcCCCCCceeEecccccc
Q 010842          238 EADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSAC-ICPEFRHYLNGIERVDSFSFSPHKWL  316 (499)
Q Consensus       238 ~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~-~~~~~~~~~~g~~~aDsi~~~~hK~l  316 (499)
                      +++..++ .+++|+.+.++|++|.++|+++|+++|+++|+|+|||+||++... ..+.....+.+  ++|++++++|||+
T Consensus       224 ~~~~~~~-~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~--~~D~~~~s~hK~~  300 (456)
T 2z67_A          224 KKEIELG-NRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKY--RVDAVVSSSDKNL  300 (456)
T ss_dssp             HHHHHTT-CCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTS--CCSEEEEEHHHHH
T ss_pred             HHHhhCC-CeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCC--CCCEEEEcCCCCc
Confidence            4332222 467788999999999999999999999999999999999987654 22332222333  5999999999999


Q ss_pred             cCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 010842          317 LSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLA  396 (499)
Q Consensus       317 ~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a  396 (499)
                      ++|.++|++++|++..+.. +  .+.|.....                  ...++.+|+++..+|.++++++.++..+++
T Consensus       301 ~~p~g~G~l~~~~~~~~~~-l--~~~~~g~~~------------------~~~~~~~~aal~~l~~~~~~~~~~~~~~~~  359 (456)
T 2z67_A          301 LTPIGGGLVYSTDAEFIKE-I--SLSYPGRAS------------------ATPVVNTLVSLLSMGSKNYLELVKNQKNSK  359 (456)
T ss_dssp             CCCSSCEEEEESCHHHHHH-H--HTTSCSCBC------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCeEEEEEcCHHHHhh-c--CcCCCCCCC------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999987654432 2  233331100                  002678999999999999999999999999


Q ss_pred             HHHHHHHhcCC---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCE--EEE-------eee--ECCE
Q 010842          397 KMFEGFVKSDP---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRV--YLT-------HTI--VGGL  462 (499)
Q Consensus       397 ~~l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~--~~~-------~~~--~~g~  462 (499)
                      +++.+.|+++|   ++.++ +|. ++++|++....      .   ..++.++|.++|..  -+.       +..  ....
T Consensus       360 ~~l~~~L~~~~~~~g~~v~-~~~-~~v~~~~~~~~------~---~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~  428 (456)
T 2z67_A          360 KLLDELLNDLSKKTGGKFL-DVE-SPIASCISVNS------D---PVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTH  428 (456)
T ss_dssp             HHHHHHHHHHHHHSSCCBC-CCC-CSSEEEEECSS------C---HHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSC
T ss_pred             HHHHHHHHhcccccCCEec-CCC-CeEEEEEeccc------H---HHHHHHHHHHcCCCcceEEeecCccccccccccCc
Confidence            99999999886   76655 444 88888873211      0   24566667777631  111       000  1123


Q ss_pred             EEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          463 YMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       463 ~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      .++|+++. ..+|++||++++++|+++
T Consensus       429 ~~vr~s~~-~~~t~eeid~~l~~L~~~  454 (456)
T 2z67_A          429 DYIVMNAA-IGVRTEDIVNSVSKLEKI  454 (456)
T ss_dssp             CEEEEECC-TTCCHHHHHHHHHHHHTC
T ss_pred             chhhhhhh-cCCCHHHHHHHHHHHHHH
Confidence            67999984 889999999999999865

>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*

Probab=100.00  E-value=5.9e-31  Score=273.31  Aligned_cols=391  Identities=13%  Similarity=0.059  Sum_probs=267.1

Q ss_pred             hhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccc-cChhhHH
Q 010842           51 PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWL-ASPASTE  129 (499)
Q Consensus        51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~-~~p~~~~  129 (499)
                      |++++...+..+|  +.+..++++++.++...+...+.+..|+| .......|.++.++.....+-+..... .+++..+
T Consensus        31 p~~~~~~~~~~lp--~~~e~~~~~~~~~l~~~~~~~~~~~~~lg-~~~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~  107 (474)
T 1wyu_B           31 PKEHLREVPPRLP--EVDELTLVRHYTGLSRRQVGVDTTFYPLG-SCTMKYNPKLHEEAARLFADLHPYQDPRTAQGALR  107 (474)
T ss_dssp             CGGGBCSSCCCCC--CCCHHHHHHHHHHHHTTCCCTTTSCCCBT-TTCCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHH
T ss_pred             CHHHhccCCCCCC--CCCHHHHHHHHHHHHhCCCCcccCccccc-cccccCCHHHHHHHHHHHHhcCCCCchhhChHHHH
Confidence            4555555455778  78999999999998777665455667777 333344466555555442221222222 5788899


Q ss_pred             HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc--cCCeEEEcCCCCchhHHHHHHH
Q 010842          130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN--MHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g--~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      ++.++.+|+++++|++..        .++++|||+|+..++.+++.....+    |  .++..|+++..+|.++.++++.
T Consensus       108 l~~~l~~~la~~~g~~~~--------~~~~~ggt~a~~~al~~~~~~~~~~----Gd~~~r~~Vlv~~~~h~~~~~~~~~  175 (474)
T 1wyu_B          108 LMWELGEYLKALTGMDAI--------TLEPAAGAHGELTGILIIRAYHEDR----GEGRTRRVVLVPDSAHGSNPATASM  175 (474)
T ss_dssp             HHHHHHHHHHHHHTCSEE--------ECCCSSHHHHHHHHHHHHHHHHHHT----TCTTTCCEEEEETTSCTHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCce--------eecChHHHHHHHHHHHHHHHHHHhc----CCccCCCEEEEeCCcChhhHHHHHH
Confidence            999999999999999754        3688999999999998887543221    2  1344788899999999999999


Q ss_pred             hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-CChhHHHHHHHHhCCEEEeecccc
Q 010842          208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-DNVEPLAEVANEYGIWVHVDAAYA  286 (499)
Q Consensus       208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d~l~~I~~ia~~~~~~lhvD~A~g  286 (499)
                      .|+   +++.||++++  +.+|+++|+++|++++      .+|+++.+ |++|.+ +|+++|+++|++||+|+|+|++|+
T Consensus       176 ~G~---~vv~v~~~~~--~~~d~~~L~~~i~~~t------~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~  243 (474)
T 1wyu_B          176 AGY---QVREIPSGPE--GEVDLEALKRELGPHV------AALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANL  243 (474)
T ss_dssp             TTC---EEEEECBCTT--SSBCHHHHHHHCSTTE------EEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGG
T ss_pred             CCC---EEEEecCCCC--CCcCHHHHHHhhCCCc------eEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchh
Confidence            999   9999999754  6999999999986543      36777777 469999 899999999999999999999997


Q ss_pred             chhccCccchhhhcCCCCCceeEecccccccCCC-----cceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC----
Q 010842          287 GSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-----DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF----  357 (499)
Q Consensus       287 ~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-----~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~----  357 (499)
                      .+...  ..+....   ++|++++++||+++.|.     ++|+++++++. . +.+..  .++......  ...++    
T Consensus       244 ~~~~g--~~~~~~~---g~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l-~-~~l~~--~~~~~~g~~--~~~~~~~~~  312 (474)
T 1wyu_B          244 NAIMG--WARPGDM---GFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHL-A-PYLPV--PLVERGEEG--FYLDFDRPK  312 (474)
T ss_dssp             GGTTT--TCCHHHH---TCSEEECCTTTTTCCCCTTSCCCCCCEEECGGG-G-GGCCS--CEEEECSSC--EEEECCCTT
T ss_pred             hhhcc--CCCcccC---CCcEEEEeCccccccCCCCCCCCeEEEEEcHHH-H-HhCCC--CeeeccCCe--eEecccCcc
Confidence            65431  1111111   38999999999999996     68999998752 2 22221  111000000  00000    


Q ss_pred             --CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-CceEEEEEecCCCCCCcch
Q 010842          358 --KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-HFALVCFRLNPYPHSGSAD  434 (499)
Q Consensus       358 --~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~~~  434 (499)
                        ......++........|..++.+|.+++++..++..++++++.+.|++. ++++..++ .++.+.+.+ +..      
T Consensus       313 ~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~-~~~------  384 (474)
T 1wyu_B          313 SIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKEK-GYRVPYDGPSMHEFVAQP-PEG------  384 (474)
T ss_dssp             CCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCSSCSSCCSCEEEBC-STT------
T ss_pred             cCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcEecCCCCcceEEEEEc-CCC------
Confidence              0000001111124566777777888999999999999999999999987 88764332 333234444 211      


Q ss_pred             hHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          435 TEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       435 ~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                        ....++.++|.++|+.+ ....+.  ...++|++++ ..+|++|+++++++|+++.+
T Consensus       385 --~~~~~l~~~L~~~Gi~~-~~~~~~~~~~~~lRis~~-~~~t~e~id~~~~~L~~~~~  439 (474)
T 1wyu_B          385 --FRALDLAKGLLELGFHP-PTVYFPLIVKEALMVEPT-ETEAKETLEAFAEAMGALLK  439 (474)
T ss_dssp             --CCHHHHHHHHHHTTCCC-CEESCSTTSTTCEEECCC-TTSCHHHHHHHHHHHHHHHT
T ss_pred             --CCHHHHHHHHHHCCccc-cccccccccCCEEEEEee-cCCCHHHHHHHHHHHHHHHH
Confidence              01456777888888653 221121  2467999995 77899999999999998764

>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}

Probab=99.97  E-value=1.3e-29  Score=251.43  Aligned_cols=389  Identities=12%  Similarity=0.071  Sum_probs=247.7

Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHH-c------ccCCcccccCh-------
Q 010842           60 DSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCAC-F------NSVGFNWLASP-------  125 (499)
Q Consensus        60 ~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~------n~~~~~~~~~p-------  125 (499)
                      ..+|++|-+.+.|.-.|.++-..++.+     |.+.+--+---.-+...++... +      ...+..-+.-|       
T Consensus        39 r~~P~~g~~d~~ie~~l~~la~mdsnn-----~~~~~g~GERE~Rv~s~lv~rrh~~~~HGiGRSGd~~~~QPKAaGssl  113 (501)
T 3hl2_A           39 GKCPENGWDESTLELFLHELAIMDSNN-----FLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSL  113 (501)
T ss_dssp             CCCCSSCCCHHHHHHHHHHHHTTBGGG-----CSSCCCCSSCCCCCSCHHHHHHTTTCCSCBSCSSCTTCCCTTBHHHHH
T ss_pred             CCCCccCCCHHHHHHHHHHHHhhccCC-----CcccCCcccchHHHHHHHHHhhccCcccCCCCccccccCCCCccchHH
Confidence            488999999888877777765555544     3332211111111111122211 1      11111111112       


Q ss_pred             hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH
Q 010842          126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC  205 (499)
Q Consensus       126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~  205 (499)
                      ....-|..+.+||+.+ |+|...      ..++++|+|.+++..++++..+..+       .+..|++++.+|.|+.+++
T Consensus       114 l~~ltn~l~ld~L~~~-G~~~~~------~~flVnGsTgg~lamilaa~r~~rp-------g~d~VIvpRn~HKSv~kAl  179 (501)
T 3hl2_A          114 LNKITNSLVLDIIKLA-GVHTVA------NCFVVPMATGMSLTLCFLTLRHKRP-------KAKYIIWPRIDQKSCFKSM  179 (501)
T ss_dssp             HHHHHHHHHHHHHHHT-TCTTCC------EEEEESSCHHHHHHHHHHHHHHHCT-------TCCEEEEECCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHc-CCCCCC------cEEEECcHHHHHHHHHHHHcCcccC-------CCCEEEEecchHHHHHHHH
Confidence            2234466778899888 999762      4688999996666665555443111       1256778999999999999


Q ss_pred             HHhCCCCCCeEEeeCCC-CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCC-CcccccCChhHHHHHHHHhCCEEEeec
Q 010842          206 KLAGVSPANIRALPTSV-DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGT-TSTTAVDNVEPLAEVANEYGIWVHVDA  283 (499)
Q Consensus       206 ~~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gt-t~~G~id~l~~I~~ia~~~~~~lhvD~  283 (499)
                      .++|+   .+++|+... +..+.+|+++|+++|++.   +....+++++..+ +..+.++||++|+++|++||+|+|||+
T Consensus       180 iL~Gl---~Pv~V~p~~d~~~~~id~e~le~aI~e~---ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDe  253 (501)
T 3hl2_A          180 ITAGF---EPVVIENVLEGDELRTDLKAVEAKVQEL---GPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNN  253 (501)
T ss_dssp             HHTTC---EEEEECEEEETTEEEECHHHHHHHHHHH---CGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEEC
T ss_pred             HHcCC---eEEEEeeeecccccCCCHHHHHHHHHhc---CCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeC
Confidence            99999   999887621 124799999999999986   2123334444433 334577999999999999999999999


Q ss_pred             cccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842          284 AYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVG  363 (499)
Q Consensus       284 A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~  363 (499)
                      |||+...++++........++||.++.|+||++.+|.+++++++++++.+.+..   ..|....                
T Consensus       254 AhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~~---~~yPGr~----------------  314 (501)
T 3hl2_A          254 AYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEIS---KMYPGRA----------------  314 (501)
T ss_dssp             TTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHHH---HTSCSCB----------------
T ss_pred             cchhhhhhhhhhHHHHHhcCCCcEEEecccccceeecCceEEEeCCHHHHHHHH---HhCCCCC----------------
Confidence            999976544332221112336999999999999999999999999987665432   2222110                


Q ss_pred             CCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEEcCCC-ceEEEEEecCCCCCCcchhHHHH
Q 010842          364 TGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP---RFEIVVPRH-FALVCFRLNPYPHSGSADTEMLN  439 (499)
Q Consensus       364 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~-~~~v~f~~~~~~~~~~~~~~~~~  439 (499)
                        ..+.++.+|++++.+|.+||+++++++.+++++|++.|+++.   +-+++..+. .-.+++.+..........+..+.
T Consensus       315 --S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~~~~t~~g  392 (501)
T 3hl2_A          315 --SASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLG  392 (501)
T ss_dssp             --CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTSCHHHHHH
T ss_pred             --CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEecccccccccccHHHHH
Confidence              123468899999999999999999999999999999999853   345554332 22344444332101112233333


Q ss_pred             HHHHHHHHhcCCEEEEee--------eECC---------EEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842          440 RKLLDWVNSTGRVYLTHT--------IVGG---------LYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       440 ~~l~~~l~~~g~~~~~~~--------~~~g---------~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~  496 (499)
                      ..|..+-. +|-=++.++        .+.+         ..++=++.. ..++++|||.+++.|.++..++.++
T Consensus       393 s~Lf~r~v-sG~Rvv~~~~~~~i~g~~f~~~g~h~~~~~~~yl~~a~a-iG~~~~~v~~~~~~l~~~~~~~~~~  464 (501)
T 3hl2_A          393 SMLFTRQV-SGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASA-IGMKMQDVDLFIKRLDRCLKAVRKE  464 (501)
T ss_dssp             HHHHHTTC-CSCEEECTTCCEEETTEEESSTTTTSSCCSSCEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred             HHHHhcCC-CcceeecCCCceEECCeeecCcccCCCCCCchHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            33333321 121122221        1211         245666654 7789999999999999999887654

>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*

Probab=99.97  E-value=8.2e-29  Score=254.72  Aligned_cols=377  Identities=15%  Similarity=0.103  Sum_probs=245.8

Q ss_pred             ChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHH--HHHcccC-CcccccChh
Q 010842           50 EPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEML--CACFNSV-GFNWLASPA  126 (499)
Q Consensus        50 ~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l--~~~~n~~-~~~~~~~p~  126 (499)
                      -|++++.. +.++| +|.+..++++++..+..++..  ..-.|.|.-..+...|..+.+++  ...+... ......+++
T Consensus        30 ~p~~~~~~-~~~lp-~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~g~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~g  105 (438)
T 1wyu_A           30 LPKEILSP-PIDLP-EPLPEWKVLEELRRLAAQNLP--AHKAFLGGGVRSHHVPPVVQALAARGEFLTAYTPYQPEVSQG  105 (438)
T ss_dssp             SCGGGSSC-CCCCC-CCCCHHHHHHHHHHHHHTSCC--CTTCCCCSSCCCCCCCHHHHHHHTSHHHHHCCSCCSGGGCHH
T ss_pred             CcHHHhcC-CCCCC-CCCCHHHHHHHHHHHHhcCcC--ccccccCCCccCCcCcHHHHHHHhcchhhhcCCCCcchhhhh
Confidence            37778777 78899 889999999999887655432  01113332222223445554444  2333222 111245788


Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH-
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC-  205 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~-  205 (499)
                      ..+++.++.+++++++|.+..       .+++++|+|.++..++.+.+..          ++..|+++..+|.++..++ 
T Consensus       106 ~~~~~~~~~~~la~~~g~~~~-------~i~~~~g~taa~ea~~~a~~~~----------~gd~Viv~~~~h~s~~~~~~  168 (438)
T 1wyu_A          106 VLQATFEYQTMIAELAGLEIA-------NASMYDGATALAEGVLLALRET----------GRMGVLVSQGVHPEYRAVLR  168 (438)
T ss_dssp             HHHHHHHHHHHHHHHHTSSEE-------CSCBSSHHHHHHHHHHHHHHHH----------TCCEEEEETTSCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCcc-------ceEEeCcHHHHHHHHHHHHhcC----------CCCEEEEcCccCHhHHHHHH
Confidence            889999999999999999754       3578999984433333332211          5668999999999987655 


Q ss_pred             ---HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842          206 ---KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD  282 (499)
Q Consensus       206 ---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD  282 (499)
                         +..|+   +++.||++ +  +.+|+++    |++      .+.+|+++++ |++|.++|+++|+++|+++|+|+|||
T Consensus       169 ~~a~~~G~---~v~~v~~~-~--~~~d~~~----i~~------~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd  231 (438)
T 1wyu_A          169 AYLEAVGA---KLLTLPLE-G--GRTPLPE----VGE------EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAV  231 (438)
T ss_dssp             HHHHHTTC---EEEEECCB-T--TBCCCCC----CCT------TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHCCC---EEEEEcCc-C--CccCHHH----hCC------CeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEE
Confidence               45899   99999973 3  4888776    332      2568888998 99999999999999999999999966


Q ss_pred             cc-ccchhccCccchhhhcCCCCCceeEecccc-----cccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          283 AA-YAGSACICPEFRHYLNGIERVDSFSFSPHK-----WLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       283 ~A-~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK-----~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      +. ++.+.+..+  ..     .++|++++++||     |+++| ++|+++++++. . +.+   +.++.+...+..+...
T Consensus       232 ~d~~a~g~~~~~--~~-----~g~D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~~~-~-~~l---~~~~~g~~~~~~~~~~  298 (438)
T 1wyu_A          232 ADPLSLGVLKPP--GA-----YGADIAVGDGQSLGLPMGFGGP-HFGFLATKKAF-V-RQL---PGRLVSETVDVEGRRG  298 (438)
T ss_dssp             CCTTGGGTBCCH--HH-----HTCSEEEEECTTTTCCCGGGCS-CCEEEEECGGG-G-GGC---CSCCEEEEEBTTSCEE
T ss_pred             echhhccCcCCC--cc-----CCCCEEEECCcccCCCccCCCC-CeeEEEEcHHH-H-HhC---CCceeccccccCCCcc
Confidence            43 322222222  11     148999999888     77788 89999987642 2 222   2222111000000000


Q ss_pred             CC------Cc--c-cCCCCCC---Cc-HHH--HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEE
Q 010842          357 FK------DW--Q-VGTGRRF---KS-LRL--WMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALV  420 (499)
Q Consensus       357 ~~------~~--~-~~~sr~~---~a-l~~--~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v  420 (499)
                      +.      +.  . ...+...   .+ ..+  ++.+..++.+|++++.++..++++++.+.|+++||++++.+ +.+..+
T Consensus       299 ~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~  378 (438)
T 1wyu_A          299 FILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEF  378 (438)
T ss_dssp             EEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEE
T ss_pred             eeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEECCCCCeEEEE
Confidence            00      00  0 0011111   11 233  33477788899999999999999999999999999998865 455666


Q ss_pred             EEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE-EEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          421 CFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY-LTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       421 ~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      +|+... .          ..++.++|.++|+.+ +.++.+.+..++|++++ +.+|++|+++++++|+++
T Consensus       379 ~~~~~~-~----------~~~~~~~L~~~gi~v~~~~~~~~~~~~lRis~~-~~~t~edi~~~~~~l~~~  436 (438)
T 1wyu_A          379 ALALPK-D----------PEAVRRALAERGFHGATPVPREYGENLALFAAT-ELHEEEDLLALREALKEV  436 (438)
T ss_dssp             EEECSS-C----------HHHHHHHHHHTTCCCCEECCTTSCSSEEEEECC-TTCCHHHHHHHHHHHHHH
T ss_pred             EEeCCC-C----------HHHHHHHHHHCCceeccccccccCCCeEEEEec-ccCCHHHHHHHHHHHHHH
Confidence            666431 1          456778888888654 12333233568999996 889999999999999875

>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}

Probab=99.97  E-value=2e-28  Score=249.35  Aligned_cols=359  Identities=12%  Similarity=0.015  Sum_probs=249.3

Q ss_pred             CCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHH
Q 010842           86 HWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDS  165 (499)
Q Consensus        86 ~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A  165 (499)
                      ...+|.++-+.|++..++..+.+.+...+.   ..  .++....+..++.+++++++|.+...      ..++++|||+|
T Consensus         8 ~~~~~~~~~~~pgp~~~~~~v~~a~~~~~~---~~--~~~~~~~~~~~~~~~la~~~~~~~~~------~v~~~~sgt~a   76 (411)
T 3nnk_A            8 QLNPPSRLLMGPGPINADPRVLRAMSSQLI---GQ--YDPAMTHYMNEVMALYRGVFRTENRW------TMLVDGTSRAG   76 (411)
T ss_dssp             SCCCCCCEEESSSCCCCCHHHHHHHTSCCC---CT--TCHHHHHHHHHHHHHHHHHHTCCCSE------EEEEESCHHHH
T ss_pred             ccCCccceeecCCCCCCCHHHHHHhhcccc---cc--ccHHHHHHHHHHHHHHHHHhCCCCCc------EEEECCCcHHH
Confidence            346888888888887776666555544221   11  24666678888999999999997642      25788899999


Q ss_pred             HHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHc
Q 010842          166 ILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEA  243 (499)
Q Consensus       166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~  243 (499)
                      +..++.+..+           ++..|+++..+|++  +.++++..|+   +++.+|++.+  +.+|+++|+++|++.   
T Consensus        77 l~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~---  137 (411)
T 3nnk_A           77 IEAILVSAIR-----------PGDKVLVPVFGRFGHLLCEIARRCRA---EVHTIEVPWG--EVFTPDQVEDAVKRI---  137 (411)
T ss_dssp             HHHHHHHHCC-----------TTCEEEEEECSHHHHHHHHHHHHTTC---EEEEEECCTT--CCCCHHHHHHHHHHH---
T ss_pred             HHHHHHHhcC-----------CCCEEEEecCCchHHHHHHHHHHcCC---eEEEEecCCC--CCCCHHHHHHHHhhC---
Confidence            9988887632           56778889999988  8889999999   9999999754  589999999999863   


Q ss_pred             CCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcce
Q 010842          244 GLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCC  323 (499)
Q Consensus       244 g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g  323 (499)
                        .+.+|++++++|++|.+.|+++|+++|++||+|+|+|++++.+....+. .    . ..+|++++++|||+++|.++|
T Consensus       138 --~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~-~----~-~~~d~~~~s~~K~l~~~~g~g  209 (411)
T 3nnk_A          138 --RPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLET-D----V-WGLDAVSAGMQKCLGGPSGTS  209 (411)
T ss_dssp             --CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCT-T----T-TTCSEEECCSTTTTCCCSSEE
T ss_pred             --CCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccch-h----c-cCCcEEEecCccccCCCCceE
Confidence              1347889999999999999999999999999999999998765432211 1    1 148999999999998899999


Q ss_pred             EEEEeCchhHHHhhcC----CccCCCCCCCC---CCCcccCCC----------cccCC-CCCC-CcHHHHHHHHHhcHHH
Q 010842          324 CLWVKQPGLLVKALST----DPEYLKNKPSE---SNSVVDFKD----------WQVGT-GRRF-KSLRLWMVLRSYGVLN  384 (499)
Q Consensus       324 ~l~~r~~~~l~~~~~~----~~~yl~~~~~~---~~~~~~~~~----------~~~~~-sr~~-~al~~~~~l~~~g~~g  384 (499)
                      +++++++. . +.+..    .+.|.......   ......+.+          ..... +... ....+..++..+...|
T Consensus       210 ~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g  287 (411)
T 3nnk_A          210 PITLSARM-E-EAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEG  287 (411)
T ss_dssp             EEEECHHH-H-HHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHC
T ss_pred             EEEECHHH-H-HHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhh
Confidence            99987643 2 22211    12222211100   000000000          00011 1111 1234555666666677


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC---ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC
Q 010842          385 LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH---FALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG  460 (499)
Q Consensus       385 ~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~  460 (499)
                      ++++.++..++++++.+.|++. +++++.++.   .++++|.+....         ...++.+.|.++ |+.+..+....
T Consensus       288 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~l~~~~gi~v~~g~~~~  357 (411)
T 3nnk_A          288 LDYGIARHKLHGDALVKGIQAM-GLETFGDLKHKMNNVLGVVIPQGI---------NGDQARKLMLEDFGIEIGTSFGPL  357 (411)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEECCTTC---------CHHHHHHHHHHHHSEEEEECCGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHc-CCEeCCCcccccccEEEEECCCCC---------CHHHHHHHHHHhcCeEEeCccCCC
Confidence            8999999999999999999987 887765432   466777764211         135677777666 75443332222


Q ss_pred             CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          461 GLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       461 g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      ...++|++++++.+|++||++++++|+++.+++.
T Consensus       358 ~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~  391 (411)
T 3nnk_A          358 HGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLK  391 (411)
T ss_dssp             TTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred             CCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcC
Confidence            3357999985467799999999999999987653

>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*

Probab=99.96  E-value=1.2e-27  Score=240.68  Aligned_cols=342  Identities=12%  Similarity=0.103  Sum_probs=237.3

Q ss_pred             ccccCCCCCChHHHHHHHHHHHccc----CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH
Q 010842           92 FFAFFPATVSTAGFLGEMLCACFNS----VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL  167 (499)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~~n~----~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~  167 (499)
                      |+++..+.+.++.++.. +...+..    ....+..+.....+..++.+++++++|.+.+       ..++|+|||+|+.
T Consensus         3 yld~~~~~~~~~~v~~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~-------~i~~~~g~~~a~~   74 (382)
T 4hvk_A            3 YFDYTSAKPVDERILEA-MLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG-------TVVFTSGATEANN   74 (382)
T ss_dssp             BCBTTTCCCCCHHHHHH-HHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTE-------EEEEESSHHHHHH
T ss_pred             eecCCCcCCCCHHHHHH-HHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcC-------eEEEECCchHHHH
Confidence            55555555555544433 3333321    1123444456678888899999999999754       3699999999999


Q ss_pred             HHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh---CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842          168 VTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA---GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG  244 (499)
Q Consensus       168 ~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~---G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g  244 (499)
                      .++.+.......       ++..|+++..+|+++..++..+   |+   +++.||++++  +.+|+++|+++++++    
T Consensus        75 ~~~~~~~~~~~~-------~gd~vi~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~----  138 (382)
T 4hvk_A           75 LAIIGYAMRNAR-------KGKHILVSAVEHMSVINPAKFLQKQGF---EVEYIPVGKY--GEVDVSFIDQKLRDD----  138 (382)
T ss_dssp             HHHHHHHHHHGG-------GCCEEEEETTCCHHHHHHHHHHHHTTC---EEEEECBCTT--SCBCHHHHHHHCCTT----
T ss_pred             HHHHHhhhhhcC-------CCCEEEECCCCcHHHHHHHHHHHhcCC---EEEEeccCCC--CCcCHHHHHHHhccC----
Confidence            988876532111       5678999999999998877664   88   9999999854  599999999998653    


Q ss_pred             CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceE
Q 010842          245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCC  324 (499)
Q Consensus       245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~  324 (499)
                        +.+|+++.++|++|.+.|+++|.++|++||+ +|+|++|+.+....+. ..  .   .+|++++++||++ +|.|+|+
T Consensus       139 --~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~-~~--~---~~d~~~~s~~K~~-g~~g~g~  208 (382)
T 4hvk_A          139 --TILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDV-EK--I---GADMLTISSNDIY-GPKGVGA  208 (382)
T ss_dssp             --EEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCH-HH--H---TCSEEEEESGGGT-SCTTCEE
T ss_pred             --ceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCc-hh--c---CCCEEEEeHHHhc-CCCceEE
Confidence              3589999999999999999999999999999 9999998765432221 10  1   3799999999975 4778999


Q ss_pred             EEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC-C-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010842          325 LWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR-F-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGF  402 (499)
Q Consensus       325 l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~  402 (499)
                      ++++++..+       ..++.....         ......+.. . ....+..++.. ..++++++.++..++++++.+.
T Consensus       209 ~~~~~~~~~-------~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~~~~~~~~~~~l~~~  271 (382)
T 4hvk_A          209 LWIRKEAKL-------QPVILGGGQ---------ENGLRSGSENVPSIVGFGKAAEI-TAMEWREEAERLRRLRDRIIDN  271 (382)
T ss_dssp             EEEETTCCC-------CCSSCSSCT---------GGGTSCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEcCccCc-------CcccccCCC---------cCccccCCcCHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHH
Confidence            999875311       112211100         000111111 0 11223333332 3468889999999999999999


Q ss_pred             HhcCCCeEEEcCCC---ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-------------C-----
Q 010842          403 VKSDPRFEIVVPRH---FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-------------G-----  461 (499)
Q Consensus       403 L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-------------g-----  461 (499)
                      |+++|++++..++.   .++++|.+....          ..++.+.|.++|+.+..+..+.             +     
T Consensus       272 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~  341 (382)
T 4hvk_A          272 VLKIEESYLNGHPEKRLPNNVNVRFSYIE----------GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEE  341 (382)
T ss_dssp             HTTSTTEEECSCSSSBCTTEEEEEETTCC----------HHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHHH
T ss_pred             HhcCCCeEEeCCccccCCCEEEEEECCCC----------HHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChhh
Confidence            99999999875432   357788775432          3567777877886543322111             0     


Q ss_pred             -EEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          462 -LYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       462 -~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                       ..++|+++. +.+|++|+++++++|+++.+++.+
T Consensus       342 ~~~~iRl~~~-~~~t~e~i~~~~~~l~~~~~~~~~  375 (382)
T 4hvk_A          342 AHGTLLLTLG-RYNTDEDVDRLLEVLPGVIERLRS  375 (382)
T ss_dssp             HHTEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCeEEEEcC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence             468999995 788999999999999999887754

>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}

Probab=99.96  E-value=4.6e-28  Score=247.03  Aligned_cols=357  Identities=12%  Similarity=0.063  Sum_probs=240.8

Q ss_pred             CCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHH
Q 010842           87 WLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSI  166 (499)
Q Consensus        87 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~  166 (499)
                      ..+|+++.+.|++...+..+.+.+..   ...  ...++....+..++.+++++++|.+.+.      ..++++|||+|+
T Consensus         7 ~~~~~~~~~~p~p~~~~~~v~~a~~~---~~~--~~~~~~~~~~~~~l~~~la~~~g~~~~~------~~~~~~s~t~al   75 (416)
T 3isl_A            7 LCTPLRTIMTPGPVEVDPRVLRVMST---PVV--GQFDPAFTGIMNETMEMLRELFQTKNRW------AYPIDGTSRAGI   75 (416)
T ss_dssp             CCCCCCEECSSSSCCCCHHHHHHTTS---CCC--CTTSHHHHHHHHHHHHHHHHHTTCCCSE------EEEEESCHHHHH
T ss_pred             cCcccceeecCCCcCcCHHHHHHhcc---cCC--CCccHHHHHHHHHHHHHHHHHhCCCCCc------EEEecCcHHHHH
Confidence            44677777777776666555444433   111  1223556788889999999999987652      124789999999


Q ss_pred             HHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842          167 LVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG  244 (499)
Q Consensus       167 ~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g  244 (499)
                      ..++.+...           ++..|+++..+|++  +.++++..|+   +++.+|++.++  .+|+++|+++|++..   
T Consensus        76 ~~~~~~l~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~--~~d~~~l~~~i~~~~---  136 (416)
T 3isl_A           76 EAVLASVIE-----------PEDDVLIPIYGRFGYLLTEIAERYGA---NVHMLECEWGT--VFDPEDIIREIKKVK---  136 (416)
T ss_dssp             HHHHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTTC--CCCHHHHHHHHHHHC---
T ss_pred             HHHHHHhcC-----------CCCEEEEecCCcccHHHHHHHHhcCC---eeEEEecCCCC--CCCHHHHHHHHhhCC---
Confidence            888776521           56678888899998  8888999999   99999998654  899999999998431   


Q ss_pred             CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceE
Q 010842          245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCC  324 (499)
Q Consensus       245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~  324 (499)
                        +.+|++++++|++|.+.|+++|+++|++||+++|+|++|+.+....+.     .. ..+|++++++|||+++|.++|+
T Consensus       137 --~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~-----~~-~~~d~~~~s~~K~l~g~~g~g~  208 (416)
T 3isl_A          137 --PKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKV-----DE-WKIDAAIGGTQKCLSVPSGMAP  208 (416)
T ss_dssp             --CSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCT-----TT-TTCSEEECCSSSTTCCCSSEEE
T ss_pred             --CcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcch-----hh-cCCCEEEecCccccCCCCCeEE
Confidence              348899999999999999999999999999999999998755432211     01 1389999999999998999999


Q ss_pred             EEEeCchhHHHhhcCC----ccC--------CCCCCCCCCCcccC-------CCcccCC-CCCC-CcHHHHHHHHHhcHH
Q 010842          325 LWVKQPGLLVKALSTD----PEY--------LKNKPSESNSVVDF-------KDWQVGT-GRRF-KSLRLWMVLRSYGVL  383 (499)
Q Consensus       325 l~~r~~~~l~~~~~~~----~~y--------l~~~~~~~~~~~~~-------~~~~~~~-sr~~-~al~~~~~l~~~g~~  383 (499)
                      ++++++. . +.+...    .+|        ..+.........+.       ....... +... ....++.++..+...
T Consensus       209 ~~~~~~~-~-~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~  286 (416)
T 3isl_A          209 ITYNERV-A-DVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEE  286 (416)
T ss_dssp             EEECHHH-H-HHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred             EEECHHH-H-HHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence            9987642 2 222211    011        11000000000000       0001111 1111 123455666666666


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC---ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeE
Q 010842          384 NLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH---FALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIV  459 (499)
Q Consensus       384 g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~  459 (499)
                      +++++.++..++++++.+.|++. ++++..++.   ..+++|.+....         ...++.+.|.++ |+.+..+...
T Consensus       287 g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~L~~~~gi~v~~g~~~  356 (416)
T 3isl_A          287 GLETRFERHRHHEAALAAGIKAM-GLRLFGDDSCKMPVVTCVEIPGGI---------DGESVRDMLLAQFGIEIASSFGP  356 (416)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCTTEEEEECCTTC---------CHHHHHHHHHHHHCEECBCCCST
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHc-CCEeccCccccCCcEEEEeCCCCC---------CHHHHHHHHHHhCCEEEecCCCC
Confidence            78999999999999999999985 888775432   467778774211         145677777766 7443322211


Q ss_pred             CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          460 GGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       460 ~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .+..++|+++....+++++|++++++|+++.+++
T Consensus       357 ~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~  390 (416)
T 3isl_A          357 LAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRH  390 (416)
T ss_dssp             TTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHc
Confidence            2346899999534445555999999999998765

>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*

Probab=99.96  E-value=2.9e-27  Score=238.23  Aligned_cols=342  Identities=12%  Similarity=0.094  Sum_probs=233.7

Q ss_pred             ccccCCCCCChHHHHHHHHHHHccc---CCc-ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH
Q 010842           92 FFAFFPATVSTAGFLGEMLCACFNS---VGF-NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL  167 (499)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~~n~---~~~-~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~  167 (499)
                      |+.+..+++.++.++.. +...+..   +.. .|..++.......++.+++++++|.+.+       ..++|+|||+|+.
T Consensus         3 yld~~~~~~~~~~v~~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a~~   74 (382)
T 4eb5_A            3 YFDYTSAKPVDERILEA-MLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGG-------TVVFTSGATEANN   74 (382)
T ss_dssp             BCBTTTCCCCCHHHHHH-HHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTE-------EEEEESSHHHHHH
T ss_pred             eeccCCCCCCCHHHHHH-HHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEcCchHHHHH
Confidence            45555444445544433 3333321   111 2444455677888899999999998643       3689999999999


Q ss_pred             HHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH---hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842          168 VTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL---AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG  244 (499)
Q Consensus       168 ~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~---~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g  244 (499)
                      .++.+.+.....       ++..|+++..+|.++..++..   .|+   +++.||++++  +.+|+++|+++|+++    
T Consensus        75 ~~~~~l~~~~~~-------~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~----  138 (382)
T 4eb5_A           75 LAIIGYAMRNAR-------KGKHILVSAVEHMSVINPAKFLQKQGF---EVEYIPVGKY--GEVDVSFIDQKLRDD----  138 (382)
T ss_dssp             HHHHHHHHHHGG-------GCCEEEEETTCCHHHHHHHHHHTTTTC---EEEEECBCTT--SCBCHHHHHHHCCTT----
T ss_pred             HHHHHHHhhccC-------CCCEEEECCCcchHHHHHHHHHHhCCc---EEEEeccCCC--CccCHHHHHHHhcCC----
Confidence            998887632111       456788999999999888775   477   8999998754  589999999988643    


Q ss_pred             CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceE
Q 010842          245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCC  324 (499)
Q Consensus       245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~  324 (499)
                        +.+|++++++|++|.+.|+++|.++|++||+| |+|++|+.+....+ ...    . .+|++++++||++ +|.|+|+
T Consensus       139 --~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~-~~~----~-~~di~~~s~sK~~-g~~g~G~  208 (382)
T 4eb5_A          139 --TILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVD-VEK----I-GADMLTISSNDIY-GPKGVGA  208 (382)
T ss_dssp             --EEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCC-HHH----H-TCSEEEEETGGGT-CCSSCEE
T ss_pred             --CeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccC-ccc----c-CCCEEEeehHHhc-CCCceEE
Confidence              45789999999999999999999999999999 99999985432111 111    1 3799999999985 4778999


Q ss_pred             EEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010842          325 LWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGF  402 (499)
Q Consensus       325 l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~  402 (499)
                      ++++++..+       ..++.....         ......+...  ....+..++..+ .++++++.++..++++++.+.
T Consensus       209 ~~~~~~~~l-------~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~~  271 (382)
T 4eb5_A          209 LWIRKEAKL-------QPVILGGGQ---------ENGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIIDN  271 (382)
T ss_dssp             EEEETTCCC-------CCSSCSSCT---------GGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEcccccc-------CceecCCCc---------cccccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHH
Confidence            998875211       111111000         0001111111  112334444443 357888999999999999999


Q ss_pred             HhcCCCeEEEcCC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE-------------------C
Q 010842          403 VKSDPRFEIVVPR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV-------------------G  460 (499)
Q Consensus       403 L~~~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-------------------~  460 (499)
                      |+++|++++..++   ..++++|++.+..          ..++.+.|.+.|+.+..+..+                   .
T Consensus       272 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~  341 (382)
T 4eb5_A          272 VLKIEESYLNGHPEKRLPNNVNVRFSYIE----------GESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHEE  341 (382)
T ss_dssp             HTTSTTEEECSCSSSBCTTEEEEEETTSC----------HHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHH
T ss_pred             HhhCCCeEEeCCcccCCCCEEEEEeCCcC----------HHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCChhc
Confidence            9999899887543   1457778775322          345667777778654332210                   0


Q ss_pred             CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          461 GLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       461 g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      +..++|+++. ..+|++|+++++++|+++.+++.+
T Consensus       342 ~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~~~  375 (382)
T 4eb5_A          342 AHGTLLLTLG-RYNTDEDVDRLLEVLPGVIERLRS  375 (382)
T ss_dssp             HTTEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCeEEEECC-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence            1357999984 778999999999999999887764

>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*

Probab=99.96  E-value=1.7e-27  Score=240.73  Aligned_cols=358  Identities=11%  Similarity=0.023  Sum_probs=240.9

Q ss_pred             CCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH
Q 010842           88 LSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL  167 (499)
Q Consensus        88 ~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~  167 (499)
                      ..|+++.+.|++..++..+.+.+.....   ..  ..+.......++.+++++++|.+...      ..++|+|||+|+.
T Consensus        20 ~~~~~~~~~p~p~~~~~~v~~a~~~~~~---~~--~~~~~~~~~~~l~~~la~~~~~~~~~------~v~~~~gg~~al~   88 (393)
T 3kgw_A           20 SVPTRLLLGPGPSNLAPRVLAAGSLRMI---GH--MQKEMLQIMEEIKQGIQYVFQTRNPL------TLVVSGSGHCAME   88 (393)
T ss_dssp             CCCCCEECSSSCCCCCHHHHHHTTCCCC---CT--TSHHHHHHHHHHHHHHHHHHTCCCSE------EEEESCCTTTHHH
T ss_pred             CCccceeccCCCCCCCHHHHHHhccccc---Cc--ccHHHHHHHHHHHHHHHHHhCCCCCc------EEEEeCCcHHHHH
Confidence            4577888888877766666555443221   11  23555677888899999999987541      3589999999998


Q ss_pred             HHHHHHHHHHHhHhhhhccCCeEEEcCCCCch--hHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCC
Q 010842          168 VTLIAARDRALDAVGAENMHKLVVYGSDQTHS--TFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGL  245 (499)
Q Consensus       168 ~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~--s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~  245 (499)
                      .++.+..+           ++..|+++..+|+  .+...++..|.   +++.+|++.++  .+|+++|++++++.     
T Consensus        89 ~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~--~~d~~~l~~~i~~~-----  147 (393)
T 3kgw_A           89 TALFNLLE-----------PGDSFLTGTNGIWGMRAAEIADRIGA---RVHQMIKKPGE--HYTLQEVEEGLAQH-----  147 (393)
T ss_dssp             HHHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTTC--CCCHHHHHHHHHHH-----
T ss_pred             HHHHhcCC-----------CCCEEEEEeCCchhHHHHHHHHHcCC---ceEEEeCCCCC--CCCHHHHHHHHhhC-----
Confidence            88887632           4667777777876  34778888999   99999998654  89999999999873     


Q ss_pred             ccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEE
Q 010842          246 VPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCL  325 (499)
Q Consensus       246 ~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l  325 (499)
                      .+.+|+++.++|++|.+.|+++|.++|++||+|+++|++|+.+....+.     . -..+|++++++||++++|.|+|++
T Consensus       148 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~-----~-~~~~d~~~~s~sK~~~~~~g~g~~  221 (393)
T 3kgw_A          148 KPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYM-----D-QQGIDIMYSSSQKVLNAPPGISLI  221 (393)
T ss_dssp             CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCT-----T-TTTCCEEEEESSSTTCCCSSCEEE
T ss_pred             CCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccch-----h-hcCCCEEEecCcccccCCCceeEE
Confidence            1347899999999999999999999999999999999998744322110     0 113799999999999888899999


Q ss_pred             EEeCchhHHHhhcCCcc---C-CCCCCCCCCCcccC-CCcccC-CCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 010842          326 WVKQPGLLVKALSTDPE---Y-LKNKPSESNSVVDF-KDWQVG-TGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKM  398 (499)
Q Consensus       326 ~~r~~~~l~~~~~~~~~---y-l~~~~~~~~~~~~~-~~~~~~-~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~  398 (499)
                      +++++. ..........   + +.....  ...... ...... .+... ....+..++..+..++++++.++..+++++
T Consensus       222 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~  298 (393)
T 3kgw_A          222 SFNDKA-KYKVYSRKTKPVSFYTDITYL--AKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAH  298 (393)
T ss_dssp             EECHHH-HHHHHTCSSCCSCSTTCHHHH--HHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred             EECHHH-HHHHhccCCCCCceeecHHHH--HHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence            987642 2222111111   1 000000  000000 000000 01111 123444556666667789999999999999


Q ss_pred             HHHHHhcCCCeEEEcCC---C-ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeECCEEEEEEeccCCC
Q 010842          399 FEGFVKSDPRFEIVVPR---H-FALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVGGLYMLRFAVGASL  473 (499)
Q Consensus       399 l~~~L~~~~~~~~~~~~---~-~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lRi~~~~~~  473 (499)
                      +.+.|+++ ++++..+.   . ..+++|.+....         ...++.++|.++ |+.+..+....+..++|++++...
T Consensus       299 l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~  368 (393)
T 3kgw_A          299 LHKHLQEM-GLKFFVKDPEIRLPTITTVTVPAGY---------NWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYN  368 (393)
T ss_dssp             HHHHHHHT-TCCBSSSSGGGBCSSEEEEECCTTB---------CHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGG
T ss_pred             HHHHHHHc-CCeeccCChhhcCCeEEEEeCCCCC---------CHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccC
Confidence            99999998 88776322   1 244556664211         135677777777 754333222233467999984355


Q ss_pred             CcHHHHHHHHHHHHHHHHHHhcc
Q 010842          474 TDERHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       474 ~t~~di~~l~~~l~~~~~~l~~~  496 (499)
                      +|++|+++++++|+++.+++.+.
T Consensus       369 ~~~~~i~~~~~~l~~~l~~~~~~  391 (393)
T 3kgw_A          369 ATTENVDRVAEALREALQHCPKN  391 (393)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSCBC
T ss_pred             CCHHHHHHHHHHHHHHHHhhhhc
Confidence            69999999999999999877544

>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}

Probab=99.96  E-value=5.5e-27  Score=236.50  Aligned_cols=349  Identities=13%  Similarity=0.027  Sum_probs=238.6

Q ss_pred             cccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHH
Q 010842           91 NFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVT  169 (499)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~a  169 (499)
                      .|+.+-...+.++. +.+.+...+..   .|  ++....+.+++.+++++++|.+ ..       ..++|+|||+|+..+
T Consensus        21 ~~l~~~~~~~~~~~-v~~a~~~~~~~---~~--~~~~~~~~~~~~~~la~~~g~~~~~-------~v~~~~g~t~a~~~~   87 (386)
T 2dr1_A           21 YKLFTAGPVACFPE-VLEIMKVQMFS---HR--SKEYRKVHMDTVERLREFLEVEKGE-------VLLVPSSGTGIMEAS   87 (386)
T ss_dssp             SEECCSSSCCCCHH-HHHHTTSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCSSSE-------EEEESSCHHHHHHHH
T ss_pred             ceeecCCCcCCcHH-HHHHHhccccc---cc--CHHHHHHHHHHHHHHHHHhCCCCCc-------EEEEeCChHHHHHHH
Confidence            46665433333343 44444443321   22  3455788899999999999997 22       358999999999988


Q ss_pred             HHHHHHHHHhHhhhhccCCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCcc
Q 010842          170 LIAARDRALDAVGAENMHKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVP  247 (499)
Q Consensus       170 l~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p  247 (499)
                      +.+..+           ++..|+++..+|++  +..+++..|+   +++.+|++.+  +.+|+++|++++++.    ..+
T Consensus        88 ~~~l~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~l~~~----~~~  147 (386)
T 2dr1_A           88 IRNGVS-----------KGGKVLVTIIGAFGKRYKEVVESNGR---KAVVLEYEPG--KAVKPEDLDDALRKN----PDV  147 (386)
T ss_dssp             HHHHSC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTT--CCCCHHHHHHHHHHC----TTC
T ss_pred             HHHhhc-----------CCCeEEEEcCCchhHHHHHHHHHhCC---ceEEEecCCC--CCCCHHHHHHHHhcC----CCC
Confidence            887632           45678889999998  8889999999   9999999763  589999999999641    124


Q ss_pred             EEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEE
Q 010842          248 LFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWV  327 (499)
Q Consensus       248 ~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~  327 (499)
                      .+|+++.++|++|.+.|+++|+++|++||+++|+|++|+.+....+     +... .+|++++++||+++.|.++|++++
T Consensus       148 ~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~di~~~s~sK~~~~~~g~G~~~~  221 (386)
T 2dr1_A          148 EAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIK-----FDKW-GLDVVFSSSQKAFGVPPGLAIGAF  221 (386)
T ss_dssp             CEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCSEEEEETTSTTCCCSSCEEEEE
T ss_pred             cEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCcccc-----cccc-CCcEEEEeccccccCCCceEEEEE
Confidence            5788889999999999999999999999999999999986643221     1111 479999999999999888999998


Q ss_pred             eCchhHHHhhcCC--ccCCCCCCCCCCCcccCC-CcccCCCCCC-CcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHH
Q 010842          328 KQPGLLVKALSTD--PEYLKNKPSESNSVVDFK-DWQVGTGRRF-KSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGF  402 (499)
Q Consensus       328 r~~~~l~~~~~~~--~~yl~~~~~~~~~~~~~~-~~~~~~sr~~-~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~  402 (499)
                      +++ .. +.+...  ..+......   ...... ......+... ....+..+++.+... +++++.++..++++++.+.
T Consensus       222 ~~~-~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~  296 (386)
T 2dr1_A          222 SER-FL-EIAEKMPERGWYFDIPL---YVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREG  296 (386)
T ss_dssp             CHH-HH-HHHTTCTTCCSTTCHHH---HHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CHH-HH-HHHhcCCCCceEEeHHH---HHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence            754 22 222210  111000000   000000 0000111111 123444556555445 6888999999999999999


Q ss_pred             HhcCCCeEEEcCC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHH
Q 010842          403 VKSDPRFEIVVPR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHV  479 (499)
Q Consensus       403 L~~~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di  479 (499)
                      |++. ++++..+.   ..++++|++....         ...++.++|.++|+.+..+....+..++|+++. ..+|++|+
T Consensus       297 L~~~-g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~-~~~~~~~i  365 (386)
T 2dr1_A          297 VREI-GLDILAEPGHESPTITAVLTPPGI---------KGDEVYEAMRKRGFELAKGYGSVKEKTFRIGHM-GYMKFEDI  365 (386)
T ss_dssp             HHHT-TCCBSSCTTCBCSSEEEEECCTTC---------CHHHHHHHHHHTTEECEECCGGGTTTEEEEECC-SSCCHHHH
T ss_pred             HHHc-CCeeCcCccccCCceEEEEcCCCC---------CHHHHHHHHHHCCeEEecCccccCCCEEEEECC-CCCCHHHH
Confidence            9988 88776442   3567777774211         145677888888754433322223457999995 67899999


Q ss_pred             HHHHHHHHHHHHHHh
Q 010842          480 VAAWELIMEGADRLF  494 (499)
Q Consensus       480 ~~l~~~l~~~~~~l~  494 (499)
                      ++++++|+++.+++.
T Consensus       366 ~~~~~~l~~~~~~~~  380 (386)
T 2dr1_A          366 QEMLDNLREVINELK  380 (386)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcC
Confidence            999999999987764

>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*

Probab=99.96  E-value=2.1e-27  Score=236.27  Aligned_cols=341  Identities=13%  Similarity=0.043  Sum_probs=230.0

Q ss_pred             cCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHH
Q 010842           95 FFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAAR  174 (499)
Q Consensus        95 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar  174 (499)
                      +.|++..++..+.+.+...+..     ..++.......++.+++++++|.+...     ...++|+|||+|+..++.+..
T Consensus         4 ~~~gp~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~~-----~~v~~t~g~t~a~~~~~~~~~   73 (353)
T 2yrr_A            4 LTPGPTPIPERVQKALLRPMRG-----HLDPEVLRVNRAIQERLAALFDPGEGA-----LVAALAGSGSLGMEAGLANLD   73 (353)
T ss_dssp             CSSSSCCCCHHHHGGGGSCCCC-----TTCHHHHHHHHHHHHHHHHHHCCCTTC-----EEEEESSCHHHHHHHHHHTCS
T ss_pred             CCCCCCCCCHHHHHHHhccccc-----ccCHHHHHHHHHHHHHHHHHhCCCCCC-----ceEEEcCCcHHHHHHHHHHhc
Confidence            4455544555555555444432     134666778888999999999986110     146899999999988877653


Q ss_pred             HHHHhHhhhhccCCeEEEcCCCCchhH--HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEE
Q 010842          175 DRALDAVGAENMHKLVVYGSDQTHSTF--AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCA  252 (499)
Q Consensus       175 ~~~~~~~~~~g~~~~~i~~s~~~H~s~--~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~  252 (499)
                                  + ..|+++...|++.  .+.++..|+   +++.+|++++  +.+|+++|++++++.     .+.+|++
T Consensus        74 ------------~-d~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~l~~~-----~~~~v~~  130 (353)
T 2yrr_A           74 ------------R-GPVLVLVNGAFSQRVAEMAALHGL---DPEVLDFPPG--EPVDPEAVARALKRR-----RYRMVAL  130 (353)
T ss_dssp             ------------C-CCEEEEECSHHHHHHHHHHHHTTC---CEEEEECCTT--SCCCHHHHHHHHHHS-----CCSEEEE
T ss_pred             ------------C-CcEEEEcCCCchHHHHHHHHHcCC---ceEEEeCCCC--CCCCHHHHHHHHHhC-----CCCEEEE
Confidence                        1 3477778888884  566788899   9999999864  589999999999762     2347888


Q ss_pred             ecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchh
Q 010842          253 TVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGL  332 (499)
Q Consensus       253 t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~  332 (499)
                      +.++|++|.+.|+++|.++|++||+|+|+|++|+.+....+ ..    .. .+|++++++|||+++|.|+|+++++++. 
T Consensus       131 ~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~-~~----~~-~~d~~~~s~~K~~~~~~g~G~~~~~~~~-  203 (353)
T 2yrr_A          131 VHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFS-MR----AM-GVDYAFTGSQKCLSAPPGLAPIAASLEA-  203 (353)
T ss_dssp             ESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCC-HH----HH-TCSEEECCTTSTTCCCSSCEEEEECHHH-
T ss_pred             EccCCCcceecCHHHHHHHHHHcCCeEEEEcCccccccccc-cc----cc-CceEEEecCcccccCCCceEEEEECHHH-
Confidence            99999999999999999999999999999999964432211 11    11 3799999999999888899999987642 


Q ss_pred             HHHhhcCCccCCCCCCCCCCCcccCC-CcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010842          333 LVKALSTDPEYLKNKPSESNSVVDFK-DWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFE  410 (499)
Q Consensus       333 l~~~~~~~~~yl~~~~~~~~~~~~~~-~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~  410 (499)
                      + +.+...+.+.....    ...... .....++... ....+..++..+...+++++.++..++++++.+.|++. +++
T Consensus       204 ~-~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~  277 (353)
T 2yrr_A          204 R-KAFTGKRGWYLDLA----RVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFR  277 (353)
T ss_dssp             H-HHCCCCSCSTTCHH----HHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred             H-HHhccCCCccccHH----HHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCc
Confidence            2 33321111110000    000000 0000111111 12334456666656678899999999999999999988 888


Q ss_pred             EEcCC--CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHH-HHHHHHH
Q 010842          411 IVVPR--HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVV-AAWELIM  487 (499)
Q Consensus       411 ~~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~-~l~~~l~  487 (499)
                      ++.++  ...+++|++....         ...++.++|.++|+.+..+.......++|+++. ...+++|++ +++++|+
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~-~~~~~~~~~~~~~~~l~  347 (353)
T 2yrr_A          278 PYPKASPLPTVLVVRPPEGV---------DADRLVRALYAEGVAVAGGIGPTRGQVLRLGLM-GEGARREAYQAFLKALD  347 (353)
T ss_dssp             ESCSSSBCTTEEEEECCTTC---------CHHHHHHHHHHTTEECEECCGGGTTTCEEEECS-GGGSCHHHHHHHHHHHH
T ss_pred             cccCccCCCeEEEEECCCCC---------CHHHHHHHHHHCCEEEeCCccccCCCeEEEecC-ccCCHHHHHHHHHHHHH
Confidence            87543  3455677764211         145677888888855443332333467999994 667888898 9999999


Q ss_pred             HHHH
Q 010842          488 EGAD  491 (499)
Q Consensus       488 ~~~~  491 (499)
                      ++.+
T Consensus       348 ~~l~  351 (353)
T 2yrr_A          348 RALA  351 (353)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8764

>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*

Probab=99.96  E-value=5.4e-27  Score=237.32  Aligned_cols=353  Identities=12%  Similarity=0.050  Sum_probs=234.3

Q ss_pred             CccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHH
Q 010842           89 SPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILV  168 (499)
Q Consensus        89 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~  168 (499)
                      .|+.+.+.+++..++..+.+.+...+..   .|  ++.......++.+++++++|.+.+.      ..++|+|||+|+..
T Consensus        17 ~~~~~~~~~g~~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~l~~~la~~~g~~~~~------~i~~~~g~t~a~~~   85 (393)
T 2huf_A           17 TPNKLLMGPGPSNAPQRVLDAMSRPILG---HL--HPETLKIMDDIKEGVRYLFQTNNIA------TFCLSASGHGGMEA   85 (393)
T ss_dssp             CCCCEECSSSCCCCCHHHHHHTTSCCCC---TT--SHHHHHHHHHHHHHHHHHHTCCCSE------EEEESSCHHHHHHH
T ss_pred             CCCeEEecCCCCCCCHHHHHHHHhhhcc---CC--CHHHHHHHHHHHHHHHHHhCCCCCc------EEEEcCcHHHHHHH
Confidence            4455556666555555555555544432   22  4555677788899999999986531      35899999999999


Q ss_pred             HHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH--HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCc
Q 010842          169 TLIAARDRALDAVGAENMHKLVVYGSDQTHSTF--AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV  246 (499)
Q Consensus       169 al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~--~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~  246 (499)
                      ++.+...           ++..|+++..+|++.  .+.++..|.   +++.+|++++  +.+|+++|+++|++.     .
T Consensus        86 ~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~-----~  144 (393)
T 2huf_A           86 TLCNLLE-----------DGDVILIGHTGHWGDRSADMATRYGA---DVRVVKSKVG--QSLSLDEIRDALLIH-----K  144 (393)
T ss_dssp             HHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTT--CCCCHHHHHHHHHHH-----C
T ss_pred             HHHHHhC-----------CCCEEEEECCCcchHHHHHHHHHcCC---eeEEEeCCCC--CCCCHHHHHHHHhcc-----C
Confidence            8887632           456788888899883  345566788   9999999764  489999999999762     1


Q ss_pred             cEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEE
Q 010842          247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLW  326 (499)
Q Consensus       247 p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~  326 (499)
                      +.+|++++++|++|.+.|+++|+++|++||+++|+|++++.+....+     +.. ..+|++++++||++++|.|+|+++
T Consensus       145 ~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~-----~~~-~~~d~~~~s~sK~l~g~~G~G~~~  218 (393)
T 2huf_A          145 PSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMF-----MDR-WEIDAMYTGSQKVLGAPPGITPVS  218 (393)
T ss_dssp             CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC-----TTT-TTCSEEECCSSSTTCCCSSCEEEE
T ss_pred             CcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcc-----hhh-cCccEEEECCCcccccCCCeEEEE
Confidence            33788899999999999999999999999999999999865432211     111 138999999999998888999999


Q ss_pred             EeCchhHHHhhcCC----ccCCCCCCCCCCCccc-CC---CcccC-CCCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHH
Q 010842          327 VKQPGLLVKALSTD----PEYLKNKPSESNSVVD-FK---DWQVG-TGRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLA  396 (499)
Q Consensus       327 ~r~~~~l~~~~~~~----~~yl~~~~~~~~~~~~-~~---~~~~~-~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a  396 (499)
                      +++ +.. +.+...    .+|..+..    ...+ +.   ..... ++.... ...+..+++.+...+++++.++..+++
T Consensus       219 ~~~-~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~  292 (393)
T 2huf_A          219 FSH-RAV-ERYKRRNTKVKVYYWDMS----LVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCA  292 (393)
T ss_dssp             ECH-HHH-HHHHTCSSCCSCGGGCHH----HHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred             ECH-HHH-HHHhhcCCCCceEEEchH----HHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence            864 333 333221    22211100    0000 00   00000 111111 122333555554456888899999999


Q ss_pred             HHHHHHHhcCCCeEEEcCC--Cc-eEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeECCEEEEEEeccCC
Q 010842          397 KMFEGFVKSDPRFEIVVPR--HF-ALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVGGLYMLRFAVGAS  472 (499)
Q Consensus       397 ~~l~~~L~~~~~~~~~~~~--~~-~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lRi~~~~~  472 (499)
                      +++.+.|+++ +++++.++  .. .+++|++....         ...++.++|.++ |+.+..+....+..++|++++.+
T Consensus       293 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~  362 (393)
T 2huf_A          293 KRLYRGLQDA-GFELYADPKDRLSTVTTIKVPQGV---------DWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQ  362 (393)
T ss_dssp             HHHHHHHHHT-TCCBSSCGGGBCTTEEEEECCTTC---------CHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGG
T ss_pred             HHHHHHHHHc-CCeeccCccccCCcEEEEEcCCCC---------CHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccC
Confidence            9999999988 88776443  22 36777764211         034567777654 74432222222446799999535


Q ss_pred             CCcHHHHHHHHHHHHHHHHHHhc
Q 010842          473 LTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       473 ~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      .++++|+++++++|+++.+++..
T Consensus       363 ~~~~e~i~~~~~~l~~~~~~~~~  385 (393)
T 2huf_A          363 NATTERVDRVLQVFQEAVAAVKP  385 (393)
T ss_dssp             GCSHHHHHHHHHHHHHHHHHHCC
T ss_pred             cCCHHHHHHHHHHHHHHHHHcCC
Confidence            57899999999999999887643

>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*

Probab=99.96  E-value=2.1e-26  Score=235.45  Aligned_cols=343  Identities=15%  Similarity=0.147  Sum_probs=233.5

Q ss_pred             cccccCCCCCChHHHHHHHHHHHcc--cC-C---c-ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH
Q 010842           91 NFFAFFPATVSTAGFLGEMLCACFN--SV-G---F-NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS  163 (499)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~~n--~~-~---~-~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt  163 (499)
                      .|+++..+++.++.+ .+.+...+.  .. .   . .+..+........++.+++++++|.+.+       ..++|+|||
T Consensus        24 iyld~~~~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-------~v~~~~ggt   95 (423)
T 3lvm_A           24 IYLDYSATTPVDPRV-AEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-------EIVFTSGAT   95 (423)
T ss_dssp             EECBTTTCCCCCHHH-HHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESSHH
T ss_pred             EeecCCCcCCCCHHH-HHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCC-------eEEEeCChH
Confidence            456665444444444 444444333  11 1   1 2333345567778889999999999754       369999999


Q ss_pred             HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh---CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHH
Q 010842          164 DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA---GVSPANIRALPTSVDANFSLSPQLLRRAVEAD  240 (499)
Q Consensus       164 ~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~---G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~  240 (499)
                      +|+..++.+..+...+       ++..|+++..+|.++..++..+   |+   +++.+|++++  +.+|+++|+++++++
T Consensus        96 ~a~~~a~~~l~~~~~~-------~gd~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~  163 (423)
T 3lvm_A           96 ESDNLAIKGAANFYQK-------KGKHIITSKTEHKAVLDTCRQLEREGF---EVTYLAPQRN--GIIDLKELEAAMRDD  163 (423)
T ss_dssp             HHHHHHHHHHHHHHTT-------TCCEEEEETTSCHHHHHHHHHHHHTTC---EEEEECCCTT--SCCCHHHHHHHCCTT
T ss_pred             HHHHHHHHHHHHhhcc-------CCCEEEECCccchHHHHHHHHHHHcCC---EEEEeccCCC--CccCHHHHHHhcCCC
Confidence            9999999887653211       4678899999999998888655   88   9999998864  589999999998653


Q ss_pred             HHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC
Q 010842          241 VEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL  320 (499)
Q Consensus       241 ~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~  320 (499)
                            +.+|+++.++|++|.+.|+++|+++|++||+++++|++|+.+....+.     ... .+|++++++||++ +|.
T Consensus       164 ------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~-----~~~-~~di~~~s~sK~~-g~~  230 (423)
T 3lvm_A          164 ------TILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDL-----SQL-KVDLMSFSGHKIY-GPK  230 (423)
T ss_dssp             ------EEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCT-----TTS-CCSEEEEESTTTT-SCS
T ss_pred             ------cEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcCh-----hhc-CCCEEEechHHhc-CCC
Confidence                  458889999999999999999999999999999999999875432211     111 3899999999965 577


Q ss_pred             cceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCC-CC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 010842          321 DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR-RF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKM  398 (499)
Q Consensus       321 ~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr-~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~  398 (499)
                      ++|+++++++..     .....+.......         .....+. .. ....+..++..+. +.++++.++..+++++
T Consensus       231 g~G~~~~~~~~~-----~~~~~~~~~~~~~---------~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~  295 (423)
T 3lvm_A          231 GIGALYVRRKPR-----VRIEAQMHGGGHE---------RGMRSGTLPVHQIVGMGEAYRIAK-EEMATEMERLRGLRNR  295 (423)
T ss_dssp             SCEEEEECBTTB-----CCCCCSSCSSCTT---------TTTCCSCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred             CeEEEEEecccc-----CCCCccccCCccc---------ccccCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence            799999876421     1111111111000         0000111 11 1122334444432 3478899999999999


Q ss_pred             HHHHHhcCCCeEEEcCCC---ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE---------------C
Q 010842          399 FEGFVKSDPRFEIVVPRH---FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV---------------G  460 (499)
Q Consensus       399 l~~~L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---------------~  460 (499)
                      +.+.|+++|+++++.++.   .+.++|++....          ...+.+.|.+   +.+.+...               .
T Consensus       296 l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~l~~~l~~---i~v~~g~~~~~~~~~~~~~~~~~g  362 (423)
T 3lvm_A          296 LWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVE----------GESLIMALKD---LAVSSGSACTSASLEPSYVLRALG  362 (423)
T ss_dssp             HHHHHTTSTTEEEESCSTTBCTTEEEEEETTSC----------HHHHHHHTTT---EECBCCCC-----CCCCHHHHHHT
T ss_pred             HHHHHhcCCCEEEeCCccccCCCeEEEEeCCCC----------HHHHHHHHhh---heeccCccccCCCccccHHHHHhC
Confidence            999999999999886543   357778774432          3445555544   33332211               0


Q ss_pred             -----CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          461 -----GLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       461 -----g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                           ...++|+++. ..+|++||++++++|+++.+++.+
T Consensus       363 ~~~~~~~~~iRi~~~-~~~t~e~i~~~~~~l~~~~~~~~~  401 (423)
T 3lvm_A          363 LNDELAHSSIRFSLG-RFTTEEEIDYTIELVRKSIGRLRD  401 (423)
T ss_dssp             CCHHHHHTEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCccccCceEEEECC-CCCCHHHHHHHHHHHHHHHHHhhc
Confidence                 0367999995 788999999999999999887654

>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*

Probab=99.96  E-value=2e-27  Score=239.46  Aligned_cols=317  Identities=15%  Similarity=0.078  Sum_probs=225.7

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--H
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--F  201 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--~  201 (499)
                      ++....+..++.+++++++|.+...     ...++|+|||+|+. ++.+...           ++..|+++..+|++  +
T Consensus        30 ~~~~~~~~~~~~~~la~~~~~~~~~-----~~v~~~~g~t~al~-~~~~~~~-----------~gd~vi~~~~~~~~~~~   92 (384)
T 3zrp_A           30 SKEFVEALAYSLKGLRYVMGASKNY-----QPLIIPGGGTSAME-SVTSLLK-----------PNDKILVVSNGVFGDRW   92 (384)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTCCTTS-----EEEEEESCHHHHHH-HGGGGCC-----------TTCEEEEECSSHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCC-----cEEEEcCCcHHHHH-HHHhhcC-----------CCCEEEEecCCcchHHH
Confidence            4556778888999999999997620     14699999999998 7765421           46678888889876  6


Q ss_pred             HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842          202 AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV  281 (499)
Q Consensus       202 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv  281 (499)
                      ...++..|+   +++.+|++.+  +.+|+++|++++++.     .+.+|+++.++|++|.+.|+++|.++|++||+|+|+
T Consensus        93 ~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~  162 (384)
T 3zrp_A           93 EQIFKRYPV---NVKVLRPSPG--DYVKPGEVEEEVRKS-----EYKLVALTHVETSTGVREPVKDVINKIRKYVELIVV  162 (384)
T ss_dssp             HHHHTTSSC---EEEEECCSTT--CCCCHHHHHHHHHHS-----CEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEE
T ss_pred             HHHHHHcCC---cEEEecCCCC--CCCCHHHHHHHHHhC-----CCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEE
Confidence            666778898   9999999864  489999999999762     145889999999999999999999999999999999


Q ss_pred             eccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHh-hc-CCccCCCCCCCCCCCcccCCC
Q 010842          282 DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKA-LS-TDPEYLKNKPSESNSVVDFKD  359 (499)
Q Consensus       282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~-~~-~~~~yl~~~~~~~~~~~~~~~  359 (499)
                      |++|+.+....+.     .. ..+|++++++||++++|.|+|+++++++. +.+. .. ....+....       ..+..
T Consensus       163 D~a~~~~~~~~~~-----~~-~~~d~~~~s~~K~~~~~~g~g~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~  228 (384)
T 3zrp_A          163 DGVSSVGAEEVKA-----EE-WNVDVYLTASQKALGSAAGLGLLLLSPKA-LSILDSQNSIAGYYLDL-------RNWLP  228 (384)
T ss_dssp             ECTTTTTTSCCCT-----TT-TTCSEEEEETTSTTCCCSSEEEEEECHHH-HHHHHHCCCSCCSTTCH-------HHHHH
T ss_pred             ECcccccCccccc-----cc-cCCCEEEecCcccccCCCceEEEEECHHH-HHHhcCCCCCCcccccH-------HHHHH
Confidence            9999765432111     11 14899999999999888899999987643 2221 11 011111000       00000


Q ss_pred             cccC----CCCCC------CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC----CceEEEEEec
Q 010842          360 WQVG----TGRRF------KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR----HFALVCFRLN  425 (499)
Q Consensus       360 ~~~~----~sr~~------~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~----~~~~v~f~~~  425 (499)
                      ....    ...++      ....+..++..+...+++++.++..++++++.+.|+++ +++++.++    ...+++|++.
T Consensus       229 ~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~  307 (384)
T 3zrp_A          229 VMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIVARRPESYSNTVTGVILK  307 (384)
T ss_dssp             HHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGGBCSSEEEEECS
T ss_pred             HHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccccCccEEEEECC
Confidence            0000    11111      12345566666666778999999999999999999998 88876544    3566677775


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      ...          ..++.+.|.++|+.+..+..... .++|+++. ..+|++|+++++++|+++.+++.
T Consensus       308 ~~~----------~~~~~~~l~~~gi~v~~g~~~~~-~~iRi~~~-~~~~~e~i~~~~~~l~~~l~~~~  364 (384)
T 3zrp_A          308 VAD----------PQKVLAGTVNEGVEFAPGVHPAF-KYFRIGHM-GWVTPNDAIIAISVIERTLRKLG  364 (384)
T ss_dssp             SSC----------HHHHHHHHHTTTCCCEECCCTTC-CEEEEECC-SSCCHHHHHHHHHHHHHHHHHHT
T ss_pred             CCC----------HHHHHHHHHHCCEEEecCCCCCc-CEEEEecc-ccCCHHHHHHHHHHHHHHHHHcC
Confidence            422          45678888888865443221111 67999985 66899999999999999988764

>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*

Probab=99.95  E-value=2.6e-26  Score=232.24  Aligned_cols=353  Identities=11%  Similarity=-0.001  Sum_probs=235.9

Q ss_pred             CCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH
Q 010842           88 LSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL  167 (499)
Q Consensus        88 ~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~  167 (499)
                      .++.|+.+....+.++. +.+.+...+..   .  .++.......++.+++++++|.+.+       ..++|+|||+|+.
T Consensus         7 ~~~~yl~~~~~~~~~~~-v~~a~~~~~~~---~--~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~t~g~t~a~~   73 (392)
T 2z9v_A            7 ADPVITLTAGPVNAYPE-VLRGLGRTVLY---D--YDPAFQLLYEKVVDKAQKAMRLSNK-------PVILHGEPVLGLE   73 (392)
T ss_dssp             SCCSEECSSSCCCCCHH-HHHHTTSCCCC---T--TSHHHHHHHHHHHHHHHHHTTCSSC-------CEEESSCTHHHHH
T ss_pred             CCcceeecCCCcCCCHH-HHHHHhccccc---c--ccHHHHHHHHHHHHHHHHHhCCCCC-------EEEEeCCchHHHH
Confidence            35567776543343443 44444443432   1  2355566777888999999998643       3689999999999


Q ss_pred             HHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH--HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCC
Q 010842          168 VTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF--AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGL  245 (499)
Q Consensus       168 ~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~--~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~  245 (499)
                      .++.+...           ++..|+++..+|++.  ...++..|+   +++.+|++++  +.+|+++|++++++.    .
T Consensus        74 ~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~l~~~----~  133 (392)
T 2z9v_A           74 AAAASLIS-----------PDDVVLNLASGVYGKGFGYWAKRYSP---HLLEIEVPYN--EAIDPQAVADMLKAH----P  133 (392)
T ss_dssp             HHHHHHCC-----------TTCCEEEEESSHHHHHHHHHHHHHCS---CEEEEECCTT--SCCCHHHHHHHHHHC----T
T ss_pred             HHHHHhcC-----------CCCEEEEecCCcccHHHHHHHHHcCC---ceEEeeCCCC--CCCCHHHHHHHHhcC----C
Confidence            88887632           456788888899875  344566899   9999999865  489999999999641    1


Q ss_pred             ccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEE
Q 010842          246 VPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCL  325 (499)
Q Consensus       246 ~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l  325 (499)
                      .+.+|+++.++|+||.+.|+++|.++|++||+|+|+|++|+.+....+ .    ... .+|++++++|||+++|.|+|++
T Consensus       134 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~-~----~~~-~~d~~~~s~sK~~~~~~g~G~l  207 (392)
T 2z9v_A          134 EITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTH-P----EDC-KADIYVTGPNKCLGAPPGLTMM  207 (392)
T ss_dssp             TCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCC-G----GGG-TCSEEEECSSSTTCCCSCCEEE
T ss_pred             CCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccc-c----ccc-cceEEEecCcccccCCCceeEE
Confidence            245788999999999999999999999999999999999976433221 1    111 3799999999999988899999


Q ss_pred             EEeCchhHHHhhcC-C--cc-CCCCCCCCCCCcccCCCccc-CCCCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 010842          326 WVKQPGLLVKALST-D--PE-YLKNKPSESNSVVDFKDWQV-GTGRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMF  399 (499)
Q Consensus       326 ~~r~~~~l~~~~~~-~--~~-yl~~~~~~~~~~~~~~~~~~-~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l  399 (499)
                      +++++. . +.+.. .  +. +..+.....   ..+..... .++.... ...+..++..+...|++++.++..++++++
T Consensus       208 ~~~~~~-~-~~l~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l  282 (392)
T 2z9v_A          208 GVSERA-W-AKMKANPLAPRASMLSIVDWE---NAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAM  282 (392)
T ss_dssp             EECHHH-H-HHHHTCTTSCCSSTTCSGGGT---TTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             EECHHH-H-HHhhhccCCCCceeccHHHHH---hhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence            987642 2 22211 1  11 111100000   00000000 1111111 123455666655556888999999999999


Q ss_pred             HHHHhcCCCeEEEcCC----CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeECCEEEEEEeccCCCC
Q 010842          400 EGFVKSDPRFEIVVPR----HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVGGLYMLRFAVGASLT  474 (499)
Q Consensus       400 ~~~L~~~~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lRi~~~~~~~  474 (499)
                      .+.|+++ +++++.++    ..++++|++....         ...++.++|.++ |+.+..+....+..++|+++..+.+
T Consensus       283 ~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~  352 (392)
T 2z9v_A          283 RAGVTAM-GLSVWAASDSIASPTTTAVRTPDGV---------DEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTA  352 (392)
T ss_dssp             HHHHHHT-TCCBSSSSGGGBCTTEEEEECCTTC---------CHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGC
T ss_pred             HHHHHHc-CCeeccCCccccCCceEEEECCCCC---------CHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCccccc
Confidence            9999987 88876523    3566778774211         135677778776 8554433322344679999643478


Q ss_pred             cHHHHHHHHHHHHHHHHHHh
Q 010842          475 DERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       475 t~~di~~l~~~l~~~~~~l~  494 (499)
                      |++|+++++++|+++.+++.
T Consensus       353 ~~~~i~~~~~~l~~~~~~~~  372 (392)
T 2z9v_A          353 QPIYAIAALTALGGAMNAAG  372 (392)
T ss_dssp             SHHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHHcC
Confidence            99999999999999887653

>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.95  E-value=5.1e-27  Score=233.69  Aligned_cols=340  Identities=14%  Similarity=0.029  Sum_probs=229.1

Q ss_pred             cCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHH
Q 010842           95 FFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAAR  174 (499)
Q Consensus        95 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar  174 (499)
                      +.|++..++..+.+.+...+..     ..++.......++++++++++|.+.+       ..++|+|||+|+..++.+..
T Consensus         5 ~~~~p~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~l~~~la~~~g~~~~-------~i~~~~g~t~a~~~~~~~~~   72 (352)
T 1iug_A            5 LTPGPVRLHPKALEALARPQLH-----HRTEAAREVFLKARGLLREAFRTEGE-------VLILTGSGTLAMEALVKNLF   72 (352)
T ss_dssp             CSSSSCCCCHHHHHHHHSCCCC-----TTSHHHHHHHHHHHHHHHHHHTCSSE-------EEEEESCHHHHHHHHHHHHC
T ss_pred             ccCCCCCCCHHHHHHhccCCCC-----ccCHHHHHHHHHHHHHHHHHhCCCCc-------eEEEcCchHHHHHHHHHhcc
Confidence            3445544455555666655542     13455566777888999999998743       46999999999999888763


Q ss_pred             HHHHhHhhhhccCCeEEEcCCCCchhHH--HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEE
Q 010842          175 DRALDAVGAENMHKLVVYGSDQTHSTFA--KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCA  252 (499)
Q Consensus       175 ~~~~~~~~~~g~~~~~i~~s~~~H~s~~--ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~  252 (499)
                      .           ++..|+++..+|++..  +.++..|+   +++.+|++.+  +.+|+++|++   +      .+.+|++
T Consensus        73 ~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~---~------~~~~v~~  127 (352)
T 1iug_A           73 A-----------PGERVLVPVYGKFSERFYEIALEAGL---VVERLDYPYG--DTPRPEDVAK---E------GYAGLLL  127 (352)
T ss_dssp             C-----------TTCEEEEEECSHHHHHHHHHHHHTTC---EEEEEECCTT--CCCCTTTSCC---S------SCSEEEE
T ss_pred             C-----------CCCeEEEEeCCchhHHHHHHHHHcCC---ceEEEeCCCC--CCCCHHHHhc---c------CCcEEEE
Confidence            2           4567888889999965  45566788   9999999764  4899998877   1      2447888


Q ss_pred             ecCCCcccccCChhHHHHHHHHh--CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCc
Q 010842          253 TVGTTSTTAVDNVEPLAEVANEY--GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQP  330 (499)
Q Consensus       253 t~gtt~~G~id~l~~I~~ia~~~--~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~  330 (499)
                      ++++|+||.+.|+++|.++|++|  |+|+|+|++|+.+....+ ..    .. .+|++++++|||+++|.|+|+++++++
T Consensus       128 ~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~-~~----~~-~~d~~~~s~~K~~~~~~g~G~~~~~~~  201 (352)
T 1iug_A          128 VHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVA-LE----AM-GVDAAASGSQKGLMCPPGLGFVALSPR  201 (352)
T ss_dssp             ESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCC-SG----GG-TCSEEEEESSSTTCCCSCEEEEEECHH
T ss_pred             EEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCccee-cc----cc-CeeEEEecCcccccCCCceeEEEECHH
Confidence            99999999999999999999999  999999999975432221 11    11 389999999999999989999998654


Q ss_pred             hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 010842          331 GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRF  409 (499)
Q Consensus       331 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~  409 (499)
                      . + +.+.. ..+......   ............+.... ...+..++..+... ++++.++..++++++.+.|++. ++
T Consensus       202 ~-~-~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-g~  273 (352)
T 1iug_A          202 A-L-ERLKP-RGYYLDLAR---ELKAQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG-GL  273 (352)
T ss_dssp             H-H-HTCCC-CSSTTCHHH---HHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred             H-H-HHhhC-CCceeeHHH---HHhhcccCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHC-CC
Confidence            2 2 22211 111000000   00000000000111111 12334455544433 7888999999999999999998 88


Q ss_pred             EEEcCC-CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          410 EIVVPR-HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       410 ~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      +++.++ ..++++|++....         ...++.++|.++|+.+..+....+..++|+++. ..+|++|+++++++|++
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~  343 (352)
T 1iug_A          274 RPVPKRFSPAVAAFYLPEGV---------PYARVKEAFAQRGAVIAGGQGPLKGKVFRLSLM-GAYDRYEALGVAGMFRE  343 (352)
T ss_dssp             EESCSSBCTTCEEEECCTTC---------CHHHHHHHHHTTTEECEECCGGGTTTEEEECCC-SSCCHHHHHHHHHHHHH
T ss_pred             cccccccCCeEEEEEcCCCC---------CHHHHHHHHHHCCEEEEeCCCccCCCEEEEEcc-ccCCHHHHHHHHHHHHH
Confidence            877543 4567788775211         145677888888854433322123467999995 67889999999999999


Q ss_pred             HHHHHhc
Q 010842          489 GADRLFK  495 (499)
Q Consensus       489 ~~~~l~~  495 (499)
                      +.+++..
T Consensus       344 ~~~~~~~  350 (352)
T 1iug_A          344 VLEEILP  350 (352)
T ss_dssp             HHHHHC-
T ss_pred             HHHHhcC
Confidence            9887743

>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*

Probab=99.95  E-value=7.9e-27  Score=241.81  Aligned_cols=357  Identities=11%  Similarity=0.053  Sum_probs=238.2

Q ss_pred             cccccCCCCCChH---HHHHHHHHHHcccCCccccc-ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHH
Q 010842           91 NFFAFFPATVSTA---GFLGEMLCACFNSVGFNWLA-SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSI  166 (499)
Q Consensus        91 ~~~~~~~~~~~~~---~~~~~~l~~~~n~~~~~~~~-~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~  166 (499)
                      .|+...+.++.+.   ..+.+.+....+.+...|.. .+....+.+++.+++++++|.+.+       ..++|+|+|+++
T Consensus        69 iyld~~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~t~g~t~al  141 (465)
T 3e9k_A           69 IYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEK-------EIALMNALTVNL  141 (465)
T ss_dssp             EECBTTTSCCEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGG-------GEEECSCHHHHH
T ss_pred             EEecCCccCCChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcC-------CEEEECCHHHHH
Confidence            3555554443332   33445554433333333332 233455666788999999999754       468999999988


Q ss_pred             HHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh----HHHHHHHhCCCCCCe-----EEeeCCCCCCCccCHHHHHHHH
Q 010842          167 LVTLIAARDRALDAVGAENMHKLVVYGSDQTHST----FAKVCKLAGVSPANI-----RALPTSVDANFSLSPQLLRRAV  237 (499)
Q Consensus       167 ~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s----~~ka~~~~G~g~~~v-----~~v~~~~~~~~~~d~~~L~~~i  237 (499)
                      ..++.+..+.        +.++.+|+++..+|++    +...++..|+   ++     ..+|.+.  ++.+|+++|+++|
T Consensus       142 ~~~~~~~~~~--------~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~---~~~~~~v~~~~~~~--~~~~d~~~l~~~i  208 (465)
T 3e9k_A          142 HLLMLSFFKP--------TPKRYKILLEAKAFPSDHYAIESQLQLHGL---NIEESMRMIKPREG--EETLRIEDILEVI  208 (465)
T ss_dssp             HHHHHHHCCC--------CSSSCEEEEETTCCHHHHHHHHHHHHHTTC---CHHHHEEEECCCTT--CSSCCHHHHHHHH
T ss_pred             HHHHHHhccc--------cCCCCEEEEcCCcCCchHHHHHHHHHHcCC---cceeeeEEEecCCC--CCccCHHHHHHHH
Confidence            8777765321        2245679999999988    4456778898   64     3345543  4699999999999


Q ss_pred             HHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccccccc
Q 010842          238 EADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLL  317 (499)
Q Consensus       238 ~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~  317 (499)
                      ++..   ..+.+|++++++|+||.+.|+++|.++|++||+++|+|+||+.+....+-..   .   .+|++++++||+++
T Consensus       209 ~~~~---~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~---~---~~D~~~~s~~K~l~  279 (465)
T 3e9k_A          209 EKEG---DSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHD---W---GVDFACWCSYKYLN  279 (465)
T ss_dssp             HHHG---GGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHH---H---TCCEEEECSSSTTC
T ss_pred             HhcC---CCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhh---c---CCCEEEECcccccc
Confidence            8642   1356899999999999999999999999999999999999987654332111   1   38999999999994


Q ss_pred             -CCCcceEEEEeCchhHHHhhc-CCccCCCCCC---C--CCCCcccCCCcccCCCCCC--CcHHHHHHHHHhcHHHHHHH
Q 010842          318 -SYLDCCCLWVKQPGLLVKALS-TDPEYLKNKP---S--ESNSVVDFKDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSH  388 (499)
Q Consensus       318 -~p~~~g~l~~r~~~~l~~~~~-~~~~yl~~~~---~--~~~~~~~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~  388 (499)
                       .|.++|+++++++. . +.+. ....|.....   .  .....+......++.+...  ....+++++..+...+++++
T Consensus       280 ~gp~~~g~l~~~~~~-~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~~  357 (465)
T 3e9k_A          280 AGAGGIAGAFIHEKH-A-HTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKAL  357 (465)
T ss_dssp             CCTTCCCEEEECGGG-T-TTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHHH
T ss_pred             cCCCceEEEEEcHHH-H-hhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHHH
Confidence             78888999987642 1 1111 1111111100   0  0000000001112222222  24566777777777778999


Q ss_pred             HHHHHHHHHHHHHHHhcC----------CCeEEEcCC----CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEE
Q 010842          389 IRSDIRLAKMFEGFVKSD----------PRFEIVVPR----HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYL  454 (499)
Q Consensus       389 ~~~~~~~a~~l~~~L~~~----------~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~  454 (499)
                      .++..++++++.+.|+++          ++++++.+.    ..++++|++...           ..++.+.|.++|+++.
T Consensus       358 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~~-----------~~~l~~~L~~~Gi~v~  426 (465)
T 3e9k_A          358 RKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSVP-----------NKDVFQELEKRGVVCD  426 (465)
T ss_dssp             HHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECCT-----------TCCHHHHHHTTTEECE
T ss_pred             HHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecCC-----------HHHHHHHHHHCCEEEe
Confidence            999999999999999885          789988654    267788887521           2356777888885432


Q ss_pred             EeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          455 THTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       455 ~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                          +.+..++|+++++..+|++||++++++|+++.++.
T Consensus       427 ----~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~  461 (465)
T 3e9k_A          427 ----KRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSA  461 (465)
T ss_dssp             ----EETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred             ----cCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence                33446899998668899999999999999987643

>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}

Probab=99.95  E-value=1.1e-27  Score=239.48  Aligned_cols=343  Identities=13%  Similarity=0.043  Sum_probs=232.7

Q ss_pred             cccccCCCCCChHHHHHHHHHHHcccCC-cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHH
Q 010842           91 NFFAFFPATVSTAGFLGEMLCACFNSVG-FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVT  169 (499)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~-~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~a  169 (499)
                      +++.+.|++..+|..+.+.+...+.... .....++....+.+++.+++++++|.+...      ..++|+|||+|+..+
T Consensus         4 ~~~~~~p~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~------~v~~~~g~t~al~~~   77 (362)
T 3ffr_A            4 NKIYFTPGPSELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNY------EVLFLASATEIWERI   77 (362)
T ss_dssp             CCEEECSSSCCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTE------EEEEESCHHHHHHHH
T ss_pred             cceeccCCCcCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCc------EEEEeCCchHHHHHH
Confidence            3566777776665555544444443222 122346777788899999999999986421      468999999999888


Q ss_pred             HHHHHHHHHhHhhhhccCCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCcc
Q 010842          170 LIAARDRALDAVGAENMHKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVP  247 (499)
Q Consensus       170 l~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p  247 (499)
                      +.+...           +  .+++....|++  +...++..|+   +++.||.+.+  +.+|+++|+  +.+      .+
T Consensus        78 ~~~l~~-----------~--~~i~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~--~~~------~~  131 (362)
T 3ffr_A           78 IQNCVE-----------K--KSFHCVNGSFSKRFYEFAGELGR---EAYKEEAAFG--KGFYPADIT--VPA------DA  131 (362)
T ss_dssp             HHHHCS-----------S--EEEEEECSHHHHHHHHHHHHTTC---EEEEEECCTT--CCCCGGGCC--CCT------TC
T ss_pred             HHhccC-----------C--cEEEEcCcHHHHHHHHHHHHhCC---CeEEEecCCC--CCCCHHHHh--ccC------Cc
Confidence            876631           3  34444556666  4456778899   9999998753  589999998  332      34


Q ss_pred             EEEEEecCCCcccccCChhHHHHHHHHh-CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEE
Q 010842          248 LFLCATVGTTSTTAVDNVEPLAEVANEY-GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLW  326 (499)
Q Consensus       248 ~~vv~t~gtt~~G~id~l~~I~~ia~~~-~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~  326 (499)
                      .+|++++++|++|.+.|+++|+++|++| |+|+|+|++|+.+....        .+..+|++++++|||+++|.|+|+++
T Consensus       132 ~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~--------~~~~~d~~~~s~~K~~~~~~G~g~~~  203 (362)
T 3ffr_A          132 EIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKF--------DWTKIDSVFFSVQKCFGLPAGLGVWI  203 (362)
T ss_dssp             CEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCC--------CTTSCSEEEEETTSTTCCCSCCEEEE
T ss_pred             cEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCccc--------ChhHCcEEEEecccccCCCCceEEEE
Confidence            5888999999999999999999999999 99999999987653221        12238999999999999888999988


Q ss_pred             EeCchhHHHhhcCC-----ccCCCCCCCCCCCccc-CCCcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 010842          327 VKQPGLLVKALSTD-----PEYLKNKPSESNSVVD-FKDWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMF  399 (499)
Q Consensus       327 ~r~~~~l~~~~~~~-----~~yl~~~~~~~~~~~~-~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l  399 (499)
                      ++++. +.+.....     ..+.....    ...+ ........+... ....+..+++.+...+++++.++..++++++
T Consensus       204 ~~~~~-~~~~~~~~~gg~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l  278 (362)
T 3ffr_A          204 LNDRV-IEKSKALLAKRKSIGTYHTIP----SMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALI  278 (362)
T ss_dssp             EEHHH-HHHHHHHHHTTCCCCSTTSHH----HHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred             ECHHH-HHHhhhccccCCCCcccccHH----HHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence            87642 21111110     11110000    0000 000000111111 1234555666655667899999999999999


Q ss_pred             HHHHhcCCCeEEEcCC----CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCc
Q 010842          400 EGFVKSDPRFEIVVPR----HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTD  475 (499)
Q Consensus       400 ~~~L~~~~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t  475 (499)
                      .+.|+++|+++++.+.    ...+++|.+.. .          ..++.+.|.++|+.+..+....+..++|+++. ..++
T Consensus       279 ~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~-~~~~  346 (362)
T 3ffr_A          279 NTYIESSKVFSFGVEDAKLRSMTTIVANTTM-L----------PGEINKILEPFDMAVGAGYGSKKETQIRIANF-PAHS  346 (362)
T ss_dssp             HHHHHHCSSEEESSSCGGGBCSSEEEEEESS-C----------HHHHHHHHGGGTEEEEECSGGGTTTEEEEECC-TTSC
T ss_pred             HHHHHHccCceeccCChhhcCCceEEEecCC-C----------HHHHHHHHHHCCeEEecCccccCCCEEEEECC-CCCC
Confidence            9999999999987521    34567777654 2          56788888888865544333334567999995 6789


Q ss_pred             HHHHHHHHHHHHHHH
Q 010842          476 ERHVVAAWELIMEGA  490 (499)
Q Consensus       476 ~~di~~l~~~l~~~~  490 (499)
                      ++||++++++|+++.
T Consensus       347 ~e~i~~l~~~l~~~~  361 (362)
T 3ffr_A          347 LEQVHKLVQTLKEKI  361 (362)
T ss_dssp             HHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999998763

>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3

Probab=99.95  E-value=1.3e-26  Score=234.61  Aligned_cols=317  Identities=14%  Similarity=0.031  Sum_probs=222.3

Q ss_pred             hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--HH
Q 010842          125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--FA  202 (499)
Q Consensus       125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--~~  202 (499)
                      +....+.+++.+++++++|.+.+.      ..++|+|||+|+..++.++.+           ++..|+++..+|++  +.
T Consensus        63 ~~~~~~~~~~~~~la~~~g~~~~~------~v~~t~g~t~al~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~  125 (393)
T 1vjo_A           63 PAFLALMDEIQSLLRYVWQTENPL------TIAVSGTGTAAMEATIANAVE-----------PGDVVLIGVAGYFGNRLV  125 (393)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCCCSC------EEEESSCHHHHHHHHHHHHCC-----------TTCEEEEEESSHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCCCCCc------EEEEeCchHHHHHHHHHhccC-----------CCCEEEEEcCChhHHHHH
Confidence            446678889999999999996430      259999999999998887742           45678888899998  99


Q ss_pred             HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842          203 KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD  282 (499)
Q Consensus       203 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD  282 (499)
                      .+++..|+   +++.+|++.+  +.+|+++|++++++.     .+.+|+++.++|++|.+.|+++|.++|+++|+++++|
T Consensus       126 ~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D  195 (393)
T 1vjo_A          126 DMAGRYGA---DVRTISKPWG--EVFSLEELRTALETH-----RPAILALVHAETSTGARQPLEGVGELCREFGTLLLVD  195 (393)
T ss_dssp             HHHHHTTC---EEEEEECCTT--CCCCHHHHHHHHHHH-----CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEE
T ss_pred             HHHHHcCC---ceEEEecCCC--CCCCHHHHHHHHhhC-----CceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEE
Confidence            99999999   9999999864  589999999999763     1337888999999999999999999999999999999


Q ss_pred             ccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC----ccCCCCCCCCCCCcccC-
Q 010842          283 AAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD----PEYLKNKPSESNSVVDF-  357 (499)
Q Consensus       283 ~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~----~~yl~~~~~~~~~~~~~-  357 (499)
                      ++|+.+....+     +.. ..+|+++.++||+++.|.++|+++++++. . +.+...    .++..+...    ..++ 
T Consensus       196 ea~~~g~~~~~-----~~~-~~~di~~~s~sK~l~~~~~~G~l~~~~~~-~-~~~~~~~~~~~~~~~~~~~----~~~~~  263 (393)
T 1vjo_A          196 TVTSLGGVPIF-----LDA-WGVDLAYSCSQKGLGCSPGASPFTMSSRA-I-EKLQRRRTKVANWYLDMNL----LGKYW  263 (393)
T ss_dssp             CTTTTTTSCCC-----TTT-TTCSEEECCSSSTTCSCSSCEEEEECHHH-H-HHHHTCSSCCSCSTTCHHH----HHHHH
T ss_pred             CCccccCcCCc-----ccc-cCccEEEEcCcccccCCCceEEEEECHHH-H-HHHhccCCCCCceecCcHh----hhhhh
Confidence            99984322111     111 24799999999999999889999987642 2 222111    111110000    0000 


Q ss_pred             CCcccCC-CCC-CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC---ceEEEEEecCCCCCCc
Q 010842          358 KDWQVGT-GRR-FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH---FALVCFRLNPYPHSGS  432 (499)
Q Consensus       358 ~~~~~~~-sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~  432 (499)
                      ....... +.. .....+..+++.+..++++++.++..++++++.+.|++. ++++..+..   .++++|++....    
T Consensus       264 ~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~----  338 (393)
T 1vjo_A          264 GSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLSLHVEKEYRLPTLTTVCIPDGV----  338 (393)
T ss_dssp             STTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCTTC----
T ss_pred             ccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCcccCCccccCCcEEEEEcCCCC----
Confidence            0000111 111 112344555665555678889999999999999999988 887764432   356777763211    


Q ss_pred             chhHHHHHHHHHHHHhc-CCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          433 ADTEMLNRKLLDWVNST-GRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       433 ~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                           ...++.++|.++ |+.+..+....+..++|+++....++++++++++++|+++.
T Consensus       339 -----~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l  392 (393)
T 1vjo_A          339 -----DGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL  392 (393)
T ss_dssp             -----CHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred             -----CHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence                 145677788777 86544433333456799996445678889999999998764

>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3

Probab=99.95  E-value=1.8e-26  Score=235.48  Aligned_cols=321  Identities=12%  Similarity=0.073  Sum_probs=220.4

Q ss_pred             HHHHHHHHHHHHHHcCC-CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh----HH
Q 010842          128 TELEIVVMDWLATMLKL-PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST----FA  202 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~-~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s----~~  202 (499)
                      .....++.+++++++|. +.+       ..++|+|||+|+..++.+++.....       ++..|+++..+|.+    +.
T Consensus        71 ~~~~~~l~~~la~~~~~~~~~-------~v~~~~g~t~a~~~~~~~~~~~~~~-------~gd~Vl~~~~~~~~~~~~~~  136 (420)
T 1t3i_A           71 TDAYEAVRNKVAKFINARSPR-------EIVYTRNATEAINLVAYSWGMNNLK-------AGDEIITTVMEHHSNLVPWQ  136 (420)
T ss_dssp             HHHHHHHHHHHHHHTTCSCGG-------GEEEESSHHHHHHHHHHHTHHHHCC-------TTCEEEEETTCCGGGTHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCC-------eEEEcCChHHHHHHHHHHhhhcccC-------CCCEEEECcchhHHHHHHHH
Confidence            45556677889999998 433       4699999999999998887421111       45678889999988    66


Q ss_pred             HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842          203 KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD  282 (499)
Q Consensus       203 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD  282 (499)
                      ..++..|+   +++.+|++.  ++.+|+++|+++++++      +.+|+++.++|++|.+.|+++|.++|++||+|+|+|
T Consensus       137 ~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D  205 (420)
T 1t3i_A          137 MVAAKTGA---VLKFVQLDE--QESFDLEHFKTLLSEK------TKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVD  205 (420)
T ss_dssp             HHHHHHCC---EEEEECBCT--TSSBCHHHHHHHCCTT------EEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHhcCc---EEEEeccCC--CCCcCHHHHHHhhCCC------ceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEE
Confidence            77888999   999999874  3689999999998643      458889999999999999999999999999999999


Q ss_pred             ccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCc-cCCCCCC-CCCCCcccCCCc
Q 010842          283 AAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDP-EYLKNKP-SESNSVVDFKDW  360 (499)
Q Consensus       283 ~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~-~yl~~~~-~~~~~~~~~~~~  360 (499)
                      ++|+.+.... ....    . ..|++++++||.+ +|.|+|+++++++ .. +.+.... .+..... ......+....+
T Consensus       206 ~a~~~~~~~~-~~~~----~-~~di~~~s~sK~~-~~~g~G~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (420)
T 1t3i_A          206 ACQSAPHYPL-DVQL----I-DCDWLVASGHKMC-APTGIGFLYGKEE-IL-EAMPPFFGGGEMIAEVFFDHFTTGELPH  276 (420)
T ss_dssp             CTTTTTTSCC-CHHH----H-TCSEEEEEGGGTT-SCTTCEEEEECHH-HH-HHSCCCSCSTTSEEEECSSCEEECCTTG
T ss_pred             hhhccCCccC-chhh----c-CCCEEEEehhhhc-CCCceEEEEEchH-HH-hhcCceecCCCccccccccccCCCCchh
Confidence            9998654321 1111    1 3799999999954 5677999888643 22 3332111 0000000 000000000001


Q ss_pred             ccCCCCC-CC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----CceEEEEEecCCCCCCcc
Q 010842          361 QVGTGRR-FK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----HFALVCFRLNPYPHSGSA  433 (499)
Q Consensus       361 ~~~~sr~-~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----~~~~v~f~~~~~~~~~~~  433 (499)
                      ....+.. .. .+.++.+++.+...+++++.++..++++++.+.|+++|+++++.++     ..++++|.+.+..     
T Consensus       277 ~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-----  351 (420)
T 1t3i_A          277 KFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGLH-----  351 (420)
T ss_dssp             GGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTBC-----
T ss_pred             hccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEECCCC-----
Confidence            1111111 11 1223335565655578889999999999999999999999988654     3677888764321     


Q ss_pred             hhHHHHHHHHHHHHhcCCEEEEee-------eECC-EEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          434 DTEMLNRKLLDWVNSTGRVYLTHT-------IVGG-LYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       434 ~~~~~~~~l~~~l~~~g~~~~~~~-------~~~g-~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                           ..++.+.|.+.|+.+..+.       ...+ ..++|+++. ..++++|+++++++|+++.+.+
T Consensus       352 -----~~~~~~~l~~~gi~v~~~~~~~~~~~~~~g~~~~iRis~~-~~~~~~~i~~~~~~l~~~~~~~  413 (420)
T 1t3i_A          352 -----ASDVATMVDQDGIAIRSGHHCTQPLHRLFDASGSARASLY-FYNTKEEIDLFLQSLQATIRFF  413 (420)
T ss_dssp             -----HHHHHHHHHTTTEECBCSCTTCHHHHHHTTCCCCEEEECC-TTCCHHHHHHHHHHHHHHHHHT
T ss_pred             -----HHHHHHHHHHCCeEEeeccccchHHHHhcCCCCeEEEecC-CCCCHHHHHHHHHHHHHHHHHh
Confidence                 3456777778885432221       1112 568999995 7789999999999999998876

>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*

Probab=99.95  E-value=1.1e-26  Score=235.44  Aligned_cols=358  Identities=12%  Similarity=0.012  Sum_probs=237.6

Q ss_pred             CCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHH
Q 010842           87 WLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSI  166 (499)
Q Consensus        87 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~  166 (499)
                      ...++.+.+.+++..++..+.+.+...+..   .|  ++.......++.+++++++|.+.+.      ..++|+|||+|+
T Consensus        14 ~~~~~~~~~~~~p~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~l~~~la~~~~~~~~~------~v~~~~g~t~al   82 (396)
T 2ch1_A           14 LIIPEKIMMGPGPSNCSKRVLTAMTNTVLS---NF--HAELFRTMDEVKDGLRYIFQTENRA------TMCVSGSAHAGM   82 (396)
T ss_dssp             CCCCCCBCCSSSSCCCCHHHHHHTTSCCCC---TT--CHHHHHHHHHHHHHHHHHHTCCCSC------EEEESSCHHHHH
T ss_pred             CCCCcceeecCCCCCCCHHHHHHhcccccc---CC--ChhHHHHHHHHHHHHHHHhCCCCCc------EEEECCcHHHHH
Confidence            345666777777666665555555443321   23  4444456677888899999987541      258999999999


Q ss_pred             HHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH--HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842          167 LVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA--KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG  244 (499)
Q Consensus       167 ~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~--ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g  244 (499)
                      ..++.+...           ++..|+++..+|.++.  +.++..|+   +++.||++.+  +.+|+++|++++++.    
T Consensus        83 ~~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~l~~~----  142 (396)
T 2ch1_A           83 EAMLSNLLE-----------EGDRVLIAVNGIWAERAVEMSERYGA---DVRTIEGPPD--RPFSLETLARAIELH----  142 (396)
T ss_dssp             HHHHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTT--SCCCHHHHHHHHHHH----
T ss_pred             HHHHHHhcC-----------CCCeEEEEcCCcccHHHHHHHHHcCC---ceEEecCCCC--CCCCHHHHHHHHHhC----
Confidence            988877632           4567888889998874  57888999   9999998753  589999999999763    


Q ss_pred             CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceE
Q 010842          245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCC  324 (499)
Q Consensus       245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~  324 (499)
                       .+.+|+++.++|+||.+.|+++|.++|+++|+++|+|++|+.+....+     +... .+|++++++||+++.|.++|+
T Consensus       143 -~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~-----~~~~-~~d~~~~s~~K~~~~~~g~g~  215 (396)
T 2ch1_A          143 -QPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFY-----MDKW-EIDAVYTGAQKVLGAPPGITP  215 (396)
T ss_dssp             -CCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCC-----TTTT-TCCEEECCCC-CCCCCSSCEE
T ss_pred             -CCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccc-----hhhc-CcCEEEEcCCccccCCCCeEE
Confidence             133788899999999999999999999999999999999984422111     1111 379999999999999989999


Q ss_pred             EEEeCchhHHHhhcCC----ccCCCCCCCC--CCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 010842          325 LWVKQPGLLVKALSTD----PEYLKNKPSE--SNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAK  397 (499)
Q Consensus       325 l~~r~~~~l~~~~~~~----~~yl~~~~~~--~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~  397 (499)
                      +++++. .+ ..+...    ..+..+....  .-.......+ ...+... ....+..++..+..++++++.++..++++
T Consensus       216 ~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~  292 (396)
T 2ch1_A          216 ISISPK-AL-DVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKR-YHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQ  292 (396)
T ss_dssp             EEECHH-HH-HHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCC-CCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             EEECHH-HH-HhhhhccCcccceEechHHHHHhhhhhcccCC-CCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            988763 23 222211    1111100000  0000000000 0111111 11334445655555678889999999999


Q ss_pred             HHHHHHhcCCCeEEEcCCC----ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeECCEEEEEEeccCC
Q 010842          398 MFEGFVKSDPRFEIVVPRH----FALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVGGLYMLRFAVGAS  472 (499)
Q Consensus       398 ~l~~~L~~~~~~~~~~~~~----~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lRi~~~~~  472 (499)
                      ++.+.|+++ +++++.+..    ..+++|++....         ...++.++|.++ |+.+..+.......++|++++.+
T Consensus       293 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~  362 (396)
T 2ch1_A          293 ILYEGLGKM-GLDIFVKDPRHRLPTVTGIMIPKGV---------DWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGE  362 (396)
T ss_dssp             HHHHHHHHH-TCCBSSCSGGGBCTTEEEEECCTTC---------CHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGG
T ss_pred             HHHHHHHHC-CCeeccCCccccCCceEEEEcCCCC---------CHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCC
Confidence            999999988 887764432    136777764210         135677777665 86443222222346799999545


Q ss_pred             CCcHHHHHHHHHHHHHHHHHHhc
Q 010842          473 LTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       473 ~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      .++++|+++++++|+++.+++..
T Consensus       363 ~~~~e~i~~~~~~l~~~l~~~~~  385 (396)
T 2ch1_A          363 CSTVQKIQFYLYGFKESLKATHP  385 (396)
T ss_dssp             GCSHHHHHHHHHHHHHHHHHHCT
T ss_pred             cCCHHHHHHHHHHHHHHHHHhCc
Confidence            67999999999999999887754

>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*

Probab=99.95  E-value=2.5e-25  Score=224.01  Aligned_cols=341  Identities=14%  Similarity=0.101  Sum_probs=227.0

Q ss_pred             ccccCCCCCChHHHHHHHHHHHccc---CC-cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH
Q 010842           92 FFAFFPATVSTAGFLGEMLCACFNS---VG-FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL  167 (499)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~~n~---~~-~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~  167 (499)
                      |+++...++.++.++ +.+...+..   +. ..+..+........++.+++++++|.+.+       ..++|+|||+|+.
T Consensus         4 yld~~~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a~~   75 (384)
T 1eg5_A            4 YFDNNATTRVDDRVL-EEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPS-------EIFFTSCATESIN   75 (384)
T ss_dssp             ECBTTTCCCCCHHHH-HHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGG-------GEEEESCHHHHHH
T ss_pred             EEecCccCCCCHHHH-HHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCC-------eEEEECCHHHHHH
Confidence            555554444445444 333433321   11 11222334456677788889999998754       3699999999999


Q ss_pred             HHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH---HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842          168 VTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC---KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG  244 (499)
Q Consensus       168 ~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g  244 (499)
                      .++.+++....       .++..|+++..+|.++...+   +..|+   +++.+|++++  +.+|+++|+++++++    
T Consensus        76 ~~~~~~~~~~~-------~~gd~vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~----  139 (384)
T 1eg5_A           76 WILKTVAETFE-------KRKRTIITTPIEHKAVLETMKYLSMKGF---KVKYVPVDSR--GVVKLEELEKLVDED----  139 (384)
T ss_dssp             HHHHHHHHHTT-------TTCCEEEECTTSCHHHHHHHHHHHHTTC---EEEECCBCTT--SCBCHHHHHHHCCTT----
T ss_pred             HHHHhhhhhcc-------CCCCEEEECCCCchHHHHHHHHHHhcCC---EEEEEccCCC--CccCHHHHHHHhCCC----
Confidence            99888763100       04567888999999987766   67788   9999998753  589999999988643    


Q ss_pred             CccEEEEEecCCCcccccCChhHHHHHHHHhC--CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842          245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYG--IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC  322 (499)
Q Consensus       245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~--~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~  322 (499)
                        +.+|+++.++|++|.+.|+++|.++|++||  +++|+|++|+.+.... .    +... .+|++++++||+++ |.|+
T Consensus       140 --~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~-~----~~~~-~~di~~~s~sK~~g-~~G~  210 (384)
T 1eg5_A          140 --TFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPF-S----LEKL-EVDYASFSAHKFHG-PKGV  210 (384)
T ss_dssp             --EEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCC-C----CTTT-CCSEEEEEGGGGTS-CTTC
T ss_pred             --CeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCccc-C----chhc-CCCEEEecHHHhcC-CCce
Confidence              457888999999999999999999999999  9999999987332111 1    1122 48999999999865 5568


Q ss_pred             eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcH---HHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 010842          323 CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSL---RLWMVLRSYGVLNLQSHIRSDIRLAKMF  399 (499)
Q Consensus       323 g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al---~~~~~l~~~g~~g~~~~~~~~~~~a~~l  399 (499)
                      |+++++++.      ... .++......         .....+ ....+   .++.+++.. .+++++..++..++++++
T Consensus       211 G~~~~~~~~------~~~-~~~~~~~~~---------~~~~~~-~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l  272 (384)
T 1eg5_A          211 GITYIRKGV------PIR-PLIHGGGQE---------RGLRSG-TQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRSKL  272 (384)
T ss_dssp             EEEEECTTS------CCC-CSBCSSCTT---------TTTBCS-CCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHH
T ss_pred             EEEEEcCCC------ccc-cccccCccc---------ccccCC-CCChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHH
Confidence            999987642      011 111111000         000011 11222   233444432 356788899999999999


Q ss_pred             HHHHhcCCCeEEEcCC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC----------------
Q 010842          400 EGFVKSDPRFEIVVPR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG----------------  460 (499)
Q Consensus       400 ~~~L~~~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----------------  460 (499)
                      .+.|++ ++++++.++   ....+.|.+....          ..++.+.|.+.|+.+..+..+.                
T Consensus       273 ~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~  341 (384)
T 1eg5_A          273 VSGLMN-LGAHIITPLEISLPNTLSVSFPNIR----------GSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVD  341 (384)
T ss_dssp             HHHHHT-TTCEECSCTTSBCTTEEEEECTTCC----------HHHHHHHHHHTTEECBC------------CHHHHTTCC
T ss_pred             HHHhCC-CCeEEeCCcccCCCCEEEEEeCCCC----------HHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCC
Confidence            999998 689887543   2356777765321          3466777777785433222121                


Q ss_pred             ---CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          461 ---GLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       461 ---g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                         +..++|+++. +.+|++|+++++++|+++.+++.+
T Consensus       342 ~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~~~  378 (384)
T 1eg5_A          342 RRIAQGAIRISLC-KYNTEEEVDYFLKKIEEILSFLDL  378 (384)
T ss_dssp             HHHHHHEEEEECC-TTCCHHHHHHHHHHHHHHHHHC--
T ss_pred             hhhcCCeEEEECC-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence               1368999984 778999999999999999887644

>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*

Probab=99.95  E-value=1.7e-25  Score=227.07  Aligned_cols=319  Identities=16%  Similarity=0.140  Sum_probs=218.8

Q ss_pred             hHHHHHHHHHHHHHHcCC-CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH----
Q 010842          127 STELEIVVMDWLATMLKL-PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF----  201 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~-~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~----  201 (499)
                      ......++.+++++++|. +.+       ..++|+|||+|+..++.+++.....       ++..|+++..+|++.    
T Consensus        65 ~~~~~~~l~~~la~~~~~~~~~-------~v~~~~g~t~a~~~~~~~~~~~~~~-------~gd~vl~~~~~~~~~~~~~  130 (406)
T 1kmj_A           65 ATEKMENVRKRASLFINARSAE-------ELVFVRGTTEGINLVANSWGNSNVR-------AGDNIIISQMEHHANIVPW  130 (406)
T ss_dssp             HHHHHHHHHHHHHHHTTCSCGG-------GEEEESSHHHHHHHHHHHTHHHHCC-------TTCEEEEETTCCGGGTHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCCCC-------eEEEeCChhHHHHHHHHHhhhhcCC-------CCCEEEEecccchHHHHHH
Confidence            345566677889999998 333       4689999999999999887532111       456788888998764    


Q ss_pred             HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842          202 AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV  281 (499)
Q Consensus       202 ~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv  281 (499)
                      ...++..|+   +++.+|++++  +.+|+++|+++++++      +.+|+++.++|++|.+.|+++|+++|++||+++++
T Consensus       131 ~~~~~~~g~---~~~~~~~~~~--~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~  199 (406)
T 1kmj_A          131 QMLCARVGA---ELRVIPLNPD--GTLQLETLPTLFDEK------TRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLV  199 (406)
T ss_dssp             HHHHHHHTC---EEEEECBCTT--SCBCGGGHHHHCCTT------EEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEE
T ss_pred             HHHHHhCCC---EEEEEecCCC--CCcCHHHHHHHhccC------CeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEE
Confidence            345778899   9999998753  589999999998643      45888999999999999999999999999999999


Q ss_pred             eccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCC-C---CC--Ccc
Q 010842          282 DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPS-E---SN--SVV  355 (499)
Q Consensus       282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~-~---~~--~~~  355 (499)
                      |++|+.+....+ ...    . ..|+++.++||++ +|.|+|+++++++ .. +.+...   ..+... .   ..  ...
T Consensus       200 D~~~~~g~~~~~-~~~----~-~~d~~~~s~~K~~-g~~G~G~~~~~~~-~~-~~~~~~---~~~~~~~~~~~~~~~~~~  267 (406)
T 1kmj_A          200 DGAQAVMHHPVD-VQA----L-DCDFYVFSGHKLY-GPTGIGILYVKEA-LL-QEMPPW---EGGGSMIATVSLSEGTTW  267 (406)
T ss_dssp             ECTTTTTTSCCC-HHH----H-TCSEEEEEGGGTT-SCTTCEEEEECHH-HH-HHCCCS---SCSTTSEEEEETTTEEEE
T ss_pred             EchhhcCCCCCc-ccc----c-CCCEEEEEchhcc-CCCCcEEEEEeHH-HH-hhcCCc---ccCCCceeeccccccccc
Confidence            999987543221 111    1 3899999999988 5667999998643 22 333211   100000 0   00  000


Q ss_pred             cCCCcccCCCCC-CC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-CceEEEEEecCCCCCCc
Q 010842          356 DFKDWQVGTGRR-FK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-HFALVCFRLNPYPHSGS  432 (499)
Q Consensus       356 ~~~~~~~~~sr~-~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~  432 (499)
                      ....+..+.+.. .. ...+..++..+...+++++.++..++++++.+.|+++|+++++.++ ..++++|.+.+..    
T Consensus       268 ~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----  343 (406)
T 1kmj_A          268 TKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHH----  343 (406)
T ss_dssp             CCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTSTTEEEESCTTCCSEEEEEETTCC----
T ss_pred             CCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCcCCEEEEEECCCC----
Confidence            000011111111 11 1222244555544578888899999999999999999999987553 6678888764321    


Q ss_pred             chhHHHHHHHHHHHHhcCCEEEEeee--------ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          433 ADTEMLNRKLLDWVNSTGRVYLTHTI--------VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       433 ~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                            ..++.+.|.++|+.+..+..        ++...++|+++. ..+|++|+++++++|+++.+.+
T Consensus       344 ------~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g~~~~iRis~~-~~~t~~~i~~~~~~l~~~~~~l  405 (406)
T 1kmj_A          344 ------AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLA-MYNTHEEVDRLVTGLQRIHRLL  405 (406)
T ss_dssp             ------HHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCEEEEECC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred             ------HHHHHHHHhhCCcEEEeccccchHHHHhcCCCCeEEEEee-cCCCHHHHHHHHHHHHHHHHhh
Confidence                  34567777788855433321        122468999995 7789999999999999987754

>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}

Probab=99.94  E-value=6.2e-26  Score=228.11  Aligned_cols=340  Identities=12%  Similarity=0.023  Sum_probs=224.9

Q ss_pred             cCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHH
Q 010842           95 FFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAAR  174 (499)
Q Consensus        95 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar  174 (499)
                      +.|++..+|..+.+.+...+..   .  .++....+..++.+++++++|.+.+.     ...++|+|||+|+..++.+..
T Consensus        23 ~~pgp~~~~~~v~~a~~~~~~~---~--~~~~~~~~~~~~~~~la~~~g~~~~~-----~~i~~~~ggt~al~~~~~~~~   92 (376)
T 3f0h_A           23 FTVGPVMSSEEVRAIGAEQVPY---F--RTTEFSSTMLENEKFMLEYAKAPEGS-----KAVFMTCSSTGSMEAVVMNCF   92 (376)
T ss_dssp             CSSSSCCCCHHHHHHHTSCCCC---C--SSHHHHHHHHHHHHHHHHHHTCCTTC-----EEEEESSCHHHHHHHHHHHHC
T ss_pred             ecCCCCCCcHHHHHHhcCCCCC---C--CCHHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCChhHHHHHHHHhcc
Confidence            4566655555555555443321   1  24566678888999999999997531     023458999999998887764


Q ss_pred             HHHHhHhhhhccCCeEEEcCCCCchhH--HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEE
Q 010842          175 DRALDAVGAENMHKLVVYGSDQTHSTF--AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCA  252 (499)
Q Consensus       175 ~~~~~~~~~~g~~~~~i~~s~~~H~s~--~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~  252 (499)
                      .           ++..|+++...+++.  ...+...|.   +++.+|++.+  +.+|+++|+++++++      +.+|++
T Consensus        93 ~-----------~gd~vi~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~~~~~------~~~v~~  150 (376)
T 3f0h_A           93 T-----------KKDKVLVIDGGSFGHRFVQLCEIHEI---PYVALKLEHG--KKLTKEKLYEYDNQN------FTGLLV  150 (376)
T ss_dssp             C-----------TTCCEEEEESSHHHHHHHHHHHHTTC---CEEEEECCTT--CCCCHHHHHTTTTSC------CCEEEE
T ss_pred             C-----------CCCeEEEEeCChhhHHHHHHHHHcCC---ceEEEeCCCC--CCCCHHHHHHhhccC------ceEEEE
Confidence            2           455566666655553  345677788   9999998753  589999999876432      447888


Q ss_pred             ecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchh
Q 010842          253 TVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGL  332 (499)
Q Consensus       253 t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~  332 (499)
                      +.++|++|.+.|+++|+++|++||+++|+|++++.+....+ ...  .   .+|++++++||++++|.|+|+++++++. 
T Consensus       151 ~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~-~~~--~---~~d~~~~s~~K~l~~~~G~g~~~~~~~~-  223 (376)
T 3f0h_A          151 NVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFN-MNE--C---GADVMITGSQKVLACPPGISVIVLAPRG-  223 (376)
T ss_dssp             ESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCC-HHH--H---TCSEEEEETTTTTCCCSSCEEEEECHHH-
T ss_pred             ecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCcccc-ccc--c---CccEEEecCcccccCCCceEEEEECHHH-
Confidence            88999999999999999999999999999999987643321 111  1   3799999999999988899998876642 


Q ss_pred             HHHhhc-CCccCCCCCCCCCCCcccCCCcccCCCCCC--Cc---HHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhc
Q 010842          333 LVKALS-TDPEYLKNKPSESNSVVDFKDWQVGTGRRF--KS---LRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGFVKS  405 (499)
Q Consensus       333 l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~--~a---l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~  405 (499)
                      ...... ....+.....       .........+..+  ..   ..+..++..+... +++++.++..++++++.+.|++
T Consensus       224 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~  296 (376)
T 3f0h_A          224 VERVEKSKVRTMYFDLK-------DALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKD  296 (376)
T ss_dssp             HHHHHTCCCCCSTTCHH-------HHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHhhcCCCCceeecHH-------HHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence            222211 1111111000       0000000011111  12   3455566666555 6899999999999999999998


Q ss_pred             CCCeEEEcCCC-ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHH
Q 010842          406 DPRFEIVVPRH-FALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAW  483 (499)
Q Consensus       406 ~~~~~~~~~~~-~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~  483 (499)
                      + ++++..+.. ..++.+...+..          ..++.++|.++ |+.+..+....+..++|+++. ..+|++|+++++
T Consensus       297 ~-~~~~~~~~~~~~~~~~~~~~~~----------~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~-~~~t~e~i~~~~  364 (376)
T 3f0h_A          297 L-PFELVSESPANGVTSVHPTTAN----------AYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHI-GALTHEDNTTLV  364 (376)
T ss_dssp             S-SEEECCSSBBTTEEEEEESSSC----------HHHHHHHHHHHSSEECEECCGGGTTTCEEEECC-SSCCHHHHHHHH
T ss_pred             c-CCccCccccCceEEEEeCCCCC----------HHHHHHHHHHhCCEEEecCccccCCCEEEEecC-CCCCHHHHHHHH
Confidence            7 677765433 334444432221          45677888887 754333322223467999995 678999999999


Q ss_pred             HHHHHHHHH
Q 010842          484 ELIMEGADR  492 (499)
Q Consensus       484 ~~l~~~~~~  492 (499)
                      ++|+++.++
T Consensus       365 ~~l~~~l~~  373 (376)
T 3f0h_A          365 NAFKDLQKR  373 (376)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHh
Confidence            999988653

>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0

Probab=99.94  E-value=1e-25  Score=227.69  Aligned_cols=335  Identities=11%  Similarity=0.070  Sum_probs=229.3

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ..+.+.+...+......|...  ..++++++.+++++.+|.+...     ...++|+|||+|+..++.+...        
T Consensus        43 ~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~-----~~i~~~~g~~~a~~~~~~~l~~--------  107 (391)
T 3dzz_A           43 PEIMASMEEKLKVAAFGYESV--PAEYYKAVADWEEIEHRARPKE-----DWCVFASGVVPAISAMVRQFTS--------  107 (391)
T ss_dssp             HHHHHHHHHHHTTCCCCCBCC--CHHHHHHHHHHHHHHHSCCCCG-----GGEEEESCHHHHHHHHHHHHSC--------
T ss_pred             HHHHHHHHHHHhcCcCCCCCC--CHHHHHHHHHHHHHHhCCCCCH-----HHEEECCCHHHHHHHHHHHhCC--------
Confidence            344555555555433444333  6889999999999999954221     1468999999999888877632        


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC-CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS-VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~-~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                         ++..|+++..+|.++..+++..|.   +++.+|++ .+++|.+|+++|++++++.     .+.+|+++.++|++|.+
T Consensus       108 ---~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~i~~p~nptG~~  176 (391)
T 3dzz_A          108 ---PGDQILVQEPVYNMFYSVIEGNGR---RVISSDLIYENSKYSVNWADLEEKLATP-----SVRMMVFCNPHNPIGYA  176 (391)
T ss_dssp             ---TTCEEEECSSCCHHHHHHHHHTTC---EEEECCCEEETTEEECCHHHHHHHHTST-----TEEEEEEESSBTTTTBC
T ss_pred             ---CCCeEEECCCCcHHHHHHHHHcCC---EEEEeeeeecCCceeecHHHHHHHHhcc-----CceEEEEECCCCCCCcc
Confidence               466799999999999999999999   99999986 3455779999999998631     24578889999999999


Q ss_pred             ---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCC-CCCc--eeEeccccccc-CCCcceEEEEeCchhHHH
Q 010842          263 ---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI-ERVD--SFSFSPHKWLL-SYLDCCCLWVKQPGLLVK  335 (499)
Q Consensus       263 ---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~-~~aD--si~~~~hK~l~-~p~~~g~l~~r~~~~l~~  335 (499)
                         +++++|+++|++||+++|+|++|+++.............. ...|  .++.+.||+++ .+..+|++++++++... 
T Consensus       177 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~-  255 (391)
T 3dzz_A          177 WSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNPDLRA-  255 (391)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHH-
T ss_pred             cCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCHHHHH-
Confidence               8899999999999999999999987654321111111111 1245  88999999996 44678999887654332 


Q ss_pred             hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEcC
Q 010842          336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEIVVP  414 (499)
Q Consensus       336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~  414 (499)
                      .+........                ...........+..++.. +.+.++++.++..++++++.+.|++ +|++++..+
T Consensus       256 ~~~~~~~~~~----------------~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~  318 (391)
T 3dzz_A          256 RAEESFFLAG----------------IGEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVKVLDS  318 (391)
T ss_dssp             HHHHHHHHHT----------------CSSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEECCC
T ss_pred             HHHHHHHhhc----------------cCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEecc
Confidence            2211000000                000111112233333333 4566888899999999999999998 899988754


Q ss_pred             CCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      .....+++.+....        ....++.++|. +.|+.+..+..+.  +..++|++++   +++++|++++++|.++.+
T Consensus       319 ~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~i~~~l~~l~~~l~  387 (391)
T 3dzz_A          319 NASYLAWVDISALG--------MNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA---CPKELVIDGMQRLKQGVL  387 (391)
T ss_dssp             CBSSEEEEECGGGC--------SCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC---SCHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEEehhhcC--------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHHHHH
Confidence            44334445554311        01456777775 6786544433332  3478999985   689999999999999877


Q ss_pred             HH
Q 010842          492 RL  493 (499)
Q Consensus       492 ~l  493 (499)
                      ++
T Consensus       388 ~~  389 (391)
T 3dzz_A          388 NL  389 (391)
T ss_dssp             TC
T ss_pred             Hh
Confidence            54

>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1

Probab=99.94  E-value=6.4e-26  Score=229.15  Aligned_cols=332  Identities=16%  Similarity=0.104  Sum_probs=227.5

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ..+.+.+...+......|...++..++++++.+|+.+.+|.+...     ...++|+|||+|+..++.+..+        
T Consensus        46 ~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~--------  112 (388)
T 1j32_A           46 KHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGA-----DNILVTNGGKQSIFNLMLAMIE--------  112 (388)
T ss_dssp             HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCC--------
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEcCCHHHHHHHHHHHhcC--------
Confidence            344555555554333456555678999999999999998874221     2468999999999988887632        


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-  262 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-  262 (499)
                         ++..|+++..+|.++..+++..|.   +++.+|.+++.+|.+|+++|+++++++      +.+|+++.++|++|.+ 
T Consensus       113 ---~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~  180 (388)
T 1j32_A          113 ---PGDEVIIPAPFWVSYPEMVKLAEG---TPVILPTTVETQFKVSPEQIRQAITPK------TKLLVFNTPSNPTGMVY  180 (388)
T ss_dssp             ---TTCEEEEESSCCTHHHHHHHHTTC---EEEEECCCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCC
T ss_pred             ---CCCEEEEcCCCChhHHHHHHHcCC---EEEEecCCcccCCCCCHHHHHHhcCcC------ceEEEEeCCCCCCCcCC
Confidence               456788899999999999999999   999999875434789999999998643      4478888899999999 


Q ss_pred             --CChhHHHHHHHHhCCEEEeeccccchhccCcc---chhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842          263 --DNVEPLAEVANEYGIWVHVDAAYAGSACICPE---FRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA  336 (499)
Q Consensus       263 --d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~---~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~  336 (499)
                        +++++|+++|++||+++|+|++|+++......   ...........|.++.++||+++.| ..+|+++.+++  +.+.
T Consensus       181 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~--~~~~  258 (388)
T 1j32_A          181 TPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVP--LVKA  258 (388)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHH--HHHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhccCCcccceEEEEeCHH--HHHH
Confidence              45999999999999999999999876432111   1111000123789999999999644 33899887653  2222


Q ss_pred             hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842          337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP  414 (499)
Q Consensus       337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~  414 (499)
                      +.....+.                    +.....+..+++...+  +.+.+++..++..++++++.+.|+++|++++..+
T Consensus       259 l~~~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~  318 (388)
T 1j32_A          259 ATKIQGHS--------------------TSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECPKP  318 (388)
T ss_dssp             HHHHHHTT--------------------TCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCCCC
T ss_pred             HHHHHhhc--------------------ccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhCCCCcccCC
Confidence            21100000                    0011234444444443  4566788888999999999999999889887643


Q ss_pred             CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .....+++.+...+        ....++.++|.+ .|+.+..+..+....++|+++.   +++++|+++++.|.++.+++
T Consensus       319 ~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~---~~~~~i~~~~~~l~~~l~~~  387 (388)
T 1j32_A          319 DGAFYMFPSIAKTG--------RSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA---TDLDTIKRGMERLEKFLHGI  387 (388)
T ss_dssp             CBTTEECCBCGGGT--------CCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC---SCHHHHHHHHHHHHHHHHHH
T ss_pred             CeeEEEEEecCCCC--------CCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEec---CCHHHHHHHHHHHHHHHHHh
Confidence            33222333332100        013567777765 5865444333433467999985   68999999999999988765

>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}

Probab=99.94  E-value=2.4e-26  Score=233.14  Aligned_cols=352  Identities=11%  Similarity=0.038  Sum_probs=209.4

Q ss_pred             CCccccccCCCCCChHHHHHHHHHHHc----ccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH
Q 010842           88 LSPNFFAFFPATVSTAGFLGEMLCACF----NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS  163 (499)
Q Consensus        88 ~~p~~~~~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt  163 (499)
                      .+..|+++...++.++.++.. +...+    ......+..+.....+..++.+++++++|.+.+       ..++|+|||
T Consensus        19 ~~~iyld~~~~~~~~~~v~~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-------~v~~~~g~t   90 (400)
T 3vax_A           19 SHMTYLDAAATTRVDQRVADI-VLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPD-------ELIFTSGAT   90 (400)
T ss_dssp             ---CCCCCCCCSSSCHHHHHH-HHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGG-------GEEEESCHH
T ss_pred             CCcEEecCCCCCCCCHHHHHH-HHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCC-------cEEEeCCHH
Confidence            344566666555544544433 33322    111123444455667788899999999999754       469999999


Q ss_pred             HHHHHHHHHHHHHHHhHhhhhccCCe-EEEcCCCCchhHHHHHHHh---CCCCCCeEEeeCCCCCCCccCHHHHHHHHHH
Q 010842          164 DSILVTLIAARDRALDAVGAENMHKL-VVYGSDQTHSTFAKVCKLA---GVSPANIRALPTSVDANFSLSPQLLRRAVEA  239 (499)
Q Consensus       164 ~A~~~al~~ar~~~~~~~~~~g~~~~-~i~~s~~~H~s~~ka~~~~---G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~  239 (499)
                      +|+..++.+.......       ++. .|+++...|+++...+..+   |+   +++.||++++  +.+|+++|+++|++
T Consensus        91 ~al~~~~~~l~~~~~~-------~gd~~Vl~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~  158 (400)
T 3vax_A           91 ESNNIALLGLAPYGER-------TGRRHIITSAIEHKAVLEPLEHLAGRGF---EVDFLTPGPS--GRISVEGVMERLRP  158 (400)
T ss_dssp             HHHHHHHHTTHHHHHH-------HTCCEEEEETTSCHHHHHHHHHHHTTTC---EEEEECCCTT--CCCCHHHHHTTCCT
T ss_pred             HHHHHHHHHHHHhhcc-------CCCCEEEECccccHhHHHHHHHHHhcCC---eEEEEccCCC--CCcCHHHHHHhcCC
Confidence            9999998877532111       355 7888999999988777664   77   8999998864  58999999999865


Q ss_pred             HHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC
Q 010842          240 DVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY  319 (499)
Q Consensus       240 ~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p  319 (499)
                      +      +.+|+++.++|++|.+.|+++|.++|++||+++++|++|+.+....     .....  +|+++.++||+ ++|
T Consensus       159 ~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~-----~~~~~--~d~~~~s~~K~-~g~  224 (400)
T 3vax_A          159 D------TLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPG-----DLTTP--IDMISISGHKI-GAP  224 (400)
T ss_dssp             T------EEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGG-----GGGSC--CSEEEEETGGG-TSC
T ss_pred             C------ceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCc-----Chhhc--CcEEEEeHHHh-CCC
Confidence            3      4589999999999999999999999999999999999997543211     12223  89999999995 557


Q ss_pred             CcceEEE-EeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHH---HHHHHHhcHHHHHHHHHHHHHH
Q 010842          320 LDCCCLW-VKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRL---WMVLRSYGVLNLQSHIRSDIRL  395 (499)
Q Consensus       320 ~~~g~l~-~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~~~  395 (499)
                      .|+|+++ ++++...... .....++.....         ......+ ......+   ..++..+ .++++++.++..++
T Consensus       225 ~g~g~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~~~~~~-~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~  292 (400)
T 3vax_A          225 KGVGALVTRRREEMDDER-VPLEPIMFGGGQ---------ERKLRPG-TLPVPLIMGLAEAAKIF-EAEHAQWQVAAQDL  292 (400)
T ss_dssp             SSCEEEEECBCSSSTTCB-CCCCCSSCSSCT---------GGGTSCS-CCCHHHHHHHHHHHHHH-HHSHHHHHHHHHHH
T ss_pred             CceEEEEEecchhccccc-cccCceecCCCc---------eeeeecC-CCCHHHHHHHHHHHHHH-HhhHHHHHHHHHHH
Confidence            7899999 8874221000 000111111000         0000111 1112222   2333332 35788899999999


Q ss_pred             HHHHHHHHhcCCCeEEEcCCC---ceEEEEEecCCCCCCcchhHHHHHHHH-HHHHhcCCEEEEeee----------EC-
Q 010842          396 AKMFEGFVKSDPRFEIVVPRH---FALVCFRLNPYPHSGSADTEMLNRKLL-DWVNSTGRVYLTHTI----------VG-  460 (499)
Q Consensus       396 a~~l~~~L~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~----------~~-  460 (499)
                      ++++.+.|+ .+++++..++.   .+++.|.+....      ...+.+.+. .-+...|..+.....          .. 
T Consensus       293 ~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~L~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~  365 (400)
T 3vax_A          293 RSRLLAGLA-STSFQVNGDQDHVVPHILNLSFEDVD------AEAFLVTLKDLVAVATGSASTSASFTPSHVLRAMGLPE  365 (400)
T ss_dssp             HHHHHHHHT-TTTCEECSCTTSBCTTEEEEECTTCC------HHHHHHHHHHHHHHTTTTEEEEEEECCHHHHHTTTCCH
T ss_pred             HHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeCCCC------HHHHHHHHhcCcEEEecccccCCCCCccHHHHHcCCCc
Confidence            999999999 88999876543   357777765422      122333332 112233433332210          00 


Q ss_pred             --CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          461 --GLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       461 --g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                        ...++|+++++..+|++|+++++++|+++.++
T Consensus       366 ~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~  399 (400)
T 3vax_A          366 EAASKSLRFSWTPGQATDLDVEELARGVAKLKPS  399 (400)
T ss_dssp             HHHTSEEEEEEEEC--------------------
T ss_pred             cccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence              02679999922778999999999999987653

>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1

Probab=99.94  E-value=3.2e-25  Score=221.12  Aligned_cols=322  Identities=12%  Similarity=0.058  Sum_probs=220.0

Q ss_pred             hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      ++..+.+.+...+..    |..+.+...+++++.+|+++++|.+.+       ..++|+|||+|+..++.++++      
T Consensus        26 ~~~~v~~a~~~~~~~----~~~~~g~~~~~~~~~~~l~~~~g~~~~-------~v~~~~g~t~a~~~~~~~~~~------   88 (359)
T 1svv_A           26 MHPKILDLMARDNMT----QHAGYGQDSHCAKAARLIGELLERPDA-------DVHFISGGTQTNLIACSLALR------   88 (359)
T ss_dssp             CCHHHHHHHHHHTTC----CCCSTTCSHHHHHHHHHHHHHHTCTTS-------EEEEESCHHHHHHHHHHHHCC------
T ss_pred             CCHHHHHHHHHHHhh----ccccccccHHHHHHHHHHHHHhCCCCc-------cEEEeCCchHHHHHHHHHHhC------
Confidence            334455556665543    333445677889999999999997654       468999999999999888743      


Q ss_pred             hhhccCCeEEEcCCCCchhHHH--HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH-HcCCccEEEEEecCCCc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAK--VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV-EAGLVPLFLCATVGTTS  258 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~k--a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~-~~g~~p~~vv~t~gtt~  258 (499)
                           ++..|+++..+|.++..  .++..|.   +++.+|.+   ++.+|+++|++.++++. +.+..+.+|+++.+ |+
T Consensus        89 -----~gd~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~p  156 (359)
T 1svv_A           89 -----PWEAVIATQLGHISTHETGAIEATGH---KVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-TE  156 (359)
T ss_dssp             -----TTEEEEEETTSHHHHSSTTHHHHTTC---CEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CT
T ss_pred             -----CCCEEEEcccchHHHHHHHHHhcCCC---eeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CC
Confidence                 46689999999999888  4788899   99999985   36899999999997641 12334567888877 68


Q ss_pred             ccccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCC-CCCceeEecccccccCCCcceEEEEeCch--h
Q 010842          259 TTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPG--L  332 (499)
Q Consensus       259 ~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~--~  332 (499)
                      +|.+.|   +++|+++|++||+|+|+|++|.++.+..........++ ..+|++++++||+++ |.++|+++++++.  .
T Consensus       157 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~-~~~~g~l~~~~~~~~~  235 (359)
T 1svv_A          157 VGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGG-MFGEALIILNDALKPN  235 (359)
T ss_dssp             TSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTC-SSCEEEEECSGGGCTT
T ss_pred             CceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCC-CCceEEEEEcccHHHH
Confidence            999988   99999999999999999999955432111110000000 148999999999855 7888998886532  1


Q ss_pred             HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          333 LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       333 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                      +...... ..+..                 ..+.  .....  ....+...++++..++..++++++.+.| +.+++++.
T Consensus       236 ~~~~~~~-~~~~~-----------------~~~~--~~~~~--~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~~~~~~  292 (359)
T 1svv_A          236 ARHLIKQ-RGALM-----------------AKGW--LLGIQ--FEVLMKDNLFFELGAHSNKMAAILKAGL-EACGIRLA  292 (359)
T ss_dssp             HHHHHHH-TTCCC-----------------TTTH--HHHHH--HHHHTSTTHHHHHHHHHHHHHHHHHHHH-HHTTCCBS
T ss_pred             HHHHHhc-CCccc-----------------ccch--hhHHH--HHHHHhhhhHHHHHHHHHHHHHHHHHHh-ccCCeEEc
Confidence            1110000 00000                 0000  01111  1223445667888899999999999999 56788876


Q ss_pred             cCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          413 VPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       413 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      .+...+.+++.+.              .++.++|.++ |+.+.. ....+..++|+++ +..++++|+++++++|+++.+
T Consensus       293 ~~~~~~~~~~~~~--------------~~~~~~l~~~~gi~v~~-~~~~~~~~iRi~~-~~~~~~~~i~~~~~~l~~~~~  356 (359)
T 1svv_A          293 WPSASNQLFPILE--------------NTMIAELNNDFDMYTVE-PLKDGTCIMRLCT-SWATEEKECHRFVEVLKRLVA  356 (359)
T ss_dssp             SCCSSSEECBEEE--------------HHHHHHHTTTEECEEEE-EETTTEEEEEEEC-CTTCCHHHHHHHHHHHHHC--
T ss_pred             cCCccceEEEEcC--------------HHHHHHHHHhcCEEEEe-cccCCCceEEEEc-cCcCCHHHHHHHHHHHHHHHh
Confidence            5555555554431              3577888888 876522 1123568899997 477899999999999998765


Q ss_pred             H
Q 010842          492 R  492 (499)
Q Consensus       492 ~  492 (499)
                      +
T Consensus       357 ~  357 (359)
T 1svv_A          357 S  357 (359)
T ss_dssp             -
T ss_pred             c
Confidence            4

>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3

Probab=99.94  E-value=1.9e-25  Score=223.36  Aligned_cols=314  Identities=12%  Similarity=0.081  Sum_probs=211.1

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-HHHHHHH
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-FAKVCKL  207 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-~~ka~~~  207 (499)
                      ....++.+++++++|.+.+.     ...++|+|||+|+..++.+++..          .+.+++.+...|.+ +..++..
T Consensus        37 ~~~~~l~~~la~~~g~~~~~-----~~v~~~~g~t~a~~~~~~~~~~~----------gd~vi~~~~~~~~~~~~~~~~~  101 (366)
T 1m32_A           37 GVVEQIRQQLTALATASEGY-----TSVLLQGSGSYAVEAVLGSALGP----------QDKVLIVSNGAYGARMVEMAGL  101 (366)
T ss_dssp             TTHHHHHHHHHHHHCSSSSE-----EEEEEESCHHHHHHHHHHHSCCT----------TCCEEEEESSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCcC-----cEEEEecChHHHHHHHHHHhcCC----------CCeEEEEeCCCccHHHHHHHHH
Confidence            34455667789999843211     13699999999999988876421          12345555677876 6678888


Q ss_pred             hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842          208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG  287 (499)
Q Consensus       208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~  287 (499)
                      .|+   +++.+|++.+  +.+|+++|+++|+++.    .+.+|+++.++|++|.+.|+++|.++|++||+|+|+|++|+.
T Consensus       102 ~g~---~~~~v~~~~~--~~~d~~~l~~~l~~~~----~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~  172 (366)
T 1m32_A          102 MGI---AHHAYDCGEV--ARPDVQAIDAILNADP----TISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSF  172 (366)
T ss_dssp             HTC---CEEEEECCTT--SCCCHHHHHHHHHHCT----TCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTT
T ss_pred             hCC---ceEEEeCCCC--CCCCHHHHHHHHhcCC----CeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccc
Confidence            999   9999998754  5899999999997631    234677889999999999999999999999999999999975


Q ss_pred             hhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC-ccCCCCCCCCCCCcccCCCc-ccCCC
Q 010842          288 SACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD-PEYLKNKPSESNSVVDFKDW-QVGTG  365 (499)
Q Consensus       288 ~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~~~-~~~~s  365 (499)
                      +....+     +... .+|+++.++||+++.|.|+|++++++.  +.+.+... ..|.....      ..+..+ .....
T Consensus       173 ~~~~~~-----~~~~-~~di~~~s~~K~~~~~~g~G~~~~~~~--~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~  238 (366)
T 1m32_A          173 GGIPMD-----IAAL-HIDYLISSANKCIQGVPGFAFVIAREQ--KLAACKGHSRSLSLDLY------AQWRCMEDNHGK  238 (366)
T ss_dssp             TTSCCC-----TTTT-TCSEEEEESSSTTCCCSSEEEEEEEHH--HHTTCTTCCSCSTTCHH------HHHHHHHHTTTC
T ss_pred             cCcCcc-----cccc-CccEEEecCcccccCCCceEEEEECHH--HHHhhcCCCCCccccHH------HHHhhhcccCCC
Confidence            533211     1111 379999999999988888999999864  22222111 11111000      000000 00011


Q ss_pred             CCC--Cc---HHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCce-EEEEEecCC-CCCCcchh
Q 010842          366 RRF--KS---LRLWMVLRSYGVLN-LQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFA-LVCFRLNPY-PHSGSADT  435 (499)
Q Consensus       366 r~~--~a---l~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~-~v~f~~~~~-~~~~~~~~  435 (499)
                      +++  ..   ..+..++..+...| ++++.++..++++++.+.|++. +++++.+  +..+ +++|++... .       
T Consensus       239 ~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------  310 (366)
T 1m32_A          239 WRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNTLLDDELHSPIITAFYSPEDPQ-------  310 (366)
T ss_dssp             CSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCSSEEEEECCCCTT-------
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CCeeccCchhcCceEEEEEcCccCC-------
Confidence            112  11   23445555554455 7888999999999999999988 7776644  2334 677776530 1       


Q ss_pred             HHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          436 EMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       436 ~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                       ....++.+.|.++|+.+ .+....+..++|+++. ..++++|+++++++|+++.+
T Consensus       311 -~~~~~~~~~l~~~gi~v-~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~  363 (366)
T 1m32_A          311 -YRFSEFYRRLKEQGFVI-YPGKVSQSDCFRIGNI-GEVYAADITALLTAIRTAMY  363 (366)
T ss_dssp             -CCHHHHHHHHHHTTEEC-EECCCSSSCEEEEECC-SSCCHHHHHHHHHHHHHHCT
T ss_pred             -CCHHHHHHHHHHCCEEE-ECCcCCCCCEEEEecC-CCCCHHHHHHHHHHHHHHHH
Confidence             01456777888888543 3332224567999995 77899999999999988754

>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}

Probab=99.94  E-value=2e-25  Score=226.80  Aligned_cols=342  Identities=11%  Similarity=0.091  Sum_probs=222.8

Q ss_pred             cccccCCCCCChHHHHHHHHHHHccc----CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHH
Q 010842           91 NFFAFFPATVSTAGFLGEMLCACFNS----VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSI  166 (499)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~~n~----~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~  166 (499)
                      .|+.+...++.++.+ .+.+...+..    ....|..++.......++.+++++++|.+.+       ..++|+|||+++
T Consensus        28 ~~ld~~~~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~al   99 (406)
T 3cai_A           28 VHFDAPAGMLIPDSV-ATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPG-------GVVLGADRAVLL   99 (406)
T ss_dssp             EECBGGGCCCCCHHH-HHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESCHHHHH
T ss_pred             EEEeCCCcCCCCHHH-HHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCChHHHH
Confidence            466655444444443 3444443321    1123333344566777788889999998644       368999999988


Q ss_pred             HHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH----hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH
Q 010842          167 LVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL----AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE  242 (499)
Q Consensus       167 ~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~----~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~  242 (499)
                      ..++.+.... .       .++..|+++..+|.++..++..    .|.   +++.+|++++ ++.+|+++|+++|+++  
T Consensus       100 ~~~~~~l~~~-~-------~~gd~vi~~~~~~~~~~~~~~~~~~~~g~---~v~~v~~~~~-~~~~d~~~l~~~l~~~--  165 (406)
T 3cai_A          100 SLLAEASSSR-A-------GLGYEVIVSRLDDEANIAPWLRAAHRYGA---KVKWAEVDIE-TGELPTWQWESLISKS--  165 (406)
T ss_dssp             HHHHHHTGGG-G-------BTTCEEEEETTSCGGGTHHHHHHHHHHBC---EEEEECCCTT-TCCCCGGGHHHHCCTT--
T ss_pred             HHHHHHHhhc-c-------CCCCEEEEcCCccHHHHHHHHHHHHhcCC---eEEEEecCcc-cCCcCHHHHHHHhCCC--
Confidence            7766543110 0       1456788899999987665544    688   9999998732 3589999999998643  


Q ss_pred             cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842          243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC  322 (499)
Q Consensus       243 ~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~  322 (499)
                          +.+|++++++|++|.+.|+++|.++|+++|+++|+|++|+.+....+ ...  .   .+|++++++||+++ |. +
T Consensus       166 ----~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~-~~~--~---~~d~~~~s~~K~~g-~~-~  233 (406)
T 3cai_A          166 ----TRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLD-IRE--T---DADVVTVNAHAWGG-PP-I  233 (406)
T ss_dssp             ----EEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCC-HHH--H---CCSEEEEEGGGGTS-CS-C
T ss_pred             ----ceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCC-chh--c---CCCEEEeehhhhcC-CC-c
Confidence                45888999999999999999999999999999999999986543222 111  1   38999999999875 65 8


Q ss_pred             e-EEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCC-CCCc-HHHHHHHHHhcHH--------------HH
Q 010842          323 C-CLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR-RFKS-LRLWMVLRSYGVL--------------NL  385 (499)
Q Consensus       323 g-~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr-~~~a-l~~~~~l~~~g~~--------------g~  385 (499)
                      | +++++++  +.+.+.....+. +.     .    .......+. ...+ ..+..++..+...              ++
T Consensus       234 G~~~~~~~~--~~~~l~~~~~~~-~~-----~----~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~  301 (406)
T 3cai_A          234 GAMVFRDPS--VMNSFGSVSTNP-YA-----T----GPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSM  301 (406)
T ss_dssp             EEEEESCHH--HHHTSCCCCSCT-TC-----C----GGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHH
T ss_pred             CeEEEEehH--HHhhcCCcccCC-CC-----C----ccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhH
Confidence            8 8877653  222222111011 00     0    000111111 1111 1223344433221              47


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCCeEEEcCC--CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee------
Q 010842          386 QSHIRSDIRLAKMFEGFVKSDPRFEIVVPR--HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT------  457 (499)
Q Consensus       386 ~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~------  457 (499)
                      +++.++..++++++.+.|+++|+++++.+.  ..++++|++....          ..++.+.|.+.|+.+..+.      
T Consensus       302 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~L~~~gi~v~~g~~~~~~~  371 (406)
T 3cai_A          302 QSADAYLNRVFDYLMVSLRSLPLVMLIGRPEAQIPVVSFAVHKVP----------ADRVVQRLADNGILAIANTGSRVLD  371 (406)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCTTEEECCCCSSBCSEEEEEETTBC----------HHHHHHHHHHTTEECEECCSCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCCeEEcCCccccCCEEEEEECCcC----------HHHHHHHHHHCCcEEecCChHHHHH
Confidence            888889999999999999999999887543  3567888775322          3567777777785443322      


Q ss_pred             eE---CCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          458 IV---GGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       458 ~~---~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      .+   .+..++|+++. ..+|++|+++++++|+++
T Consensus       372 ~~g~~~~~~~iRis~~-~~~t~e~i~~~~~~l~~~  405 (406)
T 3cai_A          372 VLGVNDVGGAVTVGLA-HYSTMAEVDQLVRALASL  405 (406)
T ss_dssp             HHTTTTTTCCEEEECC-TTCCHHHHHHHHHHHHTC
T ss_pred             HcCCCCCCCeEEEEee-cCCCHHHHHHHHHHHHHh
Confidence            11   12467999995 778999999999998764

>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*

Probab=99.94  E-value=3.2e-25  Score=223.88  Aligned_cols=315  Identities=13%  Similarity=0.117  Sum_probs=215.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH---
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV---  204 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka---  204 (499)
                      .....++.+.+++++|.+.+       ..++|+|||+|+..++.+.+-.          ++..|+++..+|.++..+   
T Consensus        58 ~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~a~~~~~~~~~~~----------~gd~vl~~~~~~~~~~~~~~~  120 (390)
T 1elu_A           58 QQLIAQLRQALAETFNVDPN-------TITITDNVTTGCDIVLWGLDWH----------QGDEILLTDCEHPGIIAIVQA  120 (390)
T ss_dssp             HHHHHHHHHHHHHHTTSCGG-------GEEEESSHHHHHHHHHHHSCCC----------TTCEEEEETTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCHH-------HEEEeCChHHHHHHHHhCCCCC----------CCCEEEEecCcccHHHHHHHH
Confidence            34556677779999998654       3689999999998888776311          456788899999986543   


Q ss_pred             -HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHH----HhCCEE
Q 010842          205 -CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVAN----EYGIWV  279 (499)
Q Consensus       205 -~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~----~~~~~l  279 (499)
                       ++..|.   +++.+|++...++.+|+++|+++|+++      +.+|+++.++|++|.+.|+++|.++|+    ++|+++
T Consensus       121 ~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~l  191 (390)
T 1elu_A          121 IAARFGI---TYRFFPVAATLNQGDAAAVLANHLGPK------TRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRV  191 (390)
T ss_dssp             HHHHHCC---EEEEECCGGGSSSSCHHHHHHTTCCTT------EEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEE
T ss_pred             HHHHhCc---EEEEEcCCCCCCccchHHHHHHhcCCC------ceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEE
Confidence             677899   999999863224689999999988643      457889999999999999999999999    999999


Q ss_pred             EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC-ccCCCCCCCCCCCcccCC
Q 010842          280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD-PEYLKNKPSESNSVVDFK  358 (499)
Q Consensus       280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~  358 (499)
                      |+|++|+.+....+     +.. ...|+++.++|||+++|.++|+++++++. . +.+... ..+-...........++.
T Consensus       192 i~Dea~~~g~~~~~-----~~~-~~~d~~~~s~~K~~~~~~g~G~~~~~~~~-~-~~~~~~~~g~~~~~~~~~~~~~~~~  263 (390)
T 1elu_A          192 LVDGAQSAGSLPLD-----FSR-LEVDYYAFTGHKWFAGPAGVGGLYIHGDC-L-GEINPTYVGWRSITYGAKGEPTGWA  263 (390)
T ss_dssp             EEECTTTBTTBCCC-----TTT-SCCSEEEEESSSTTCCCTTCEEEEECTTT-G-GGCCCCSCCTTTEEECTTSCEEEEC
T ss_pred             EEEcccccCCcCCC-----hhh-cCCCEEEccccccccCCCceEEEEECHHh-H-hhcCCccccCCcccccccCcccccc
Confidence            99999975432211     111 24799999999999999999999997642 2 222110 000000000000000000


Q ss_pred             C--cccCCCCCC--CcHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCceEEEEEecCCCCCC
Q 010842          359 D--WQVGTGRRF--KSLRLWMVLRSYGVLN-LQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFALVCFRLNPYPHSG  431 (499)
Q Consensus       359 ~--~~~~~sr~~--~al~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v~f~~~~~~~~~  431 (499)
                      +  .....+...  ....+..++..+...+ ++++.++..++++++.+.|+++|+++++.+  +..++++|++....   
T Consensus       264 ~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~---  340 (390)
T 1elu_A          264 EGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSPL---  340 (390)
T ss_dssp             SGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECSSS---
T ss_pred             cchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEEEcCCCC---
Confidence            0  011111111  1123445666554445 888999999999999999999989988753  45678888774211   


Q ss_pred             cchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          432 SADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       432 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                            ...++.++|.++|+.+..+.   +..++|+++ +..++++|+++++++|+++
T Consensus       341 ------~~~~~~~~l~~~gi~v~~~~---~~~~iRis~-~~~~~~~~i~~~~~~l~~~  388 (390)
T 1elu_A          341 ------GHRAIVQKLEEQRIYLRTIA---DPDCIRACC-HYITDEEEINHLLARLADF  388 (390)
T ss_dssp             ------CHHHHHHHHHHTTEECEEET---TTTEEEEEC-CTTCCHHHHHHHHHHHTTC
T ss_pred             ------CHHHHHHHHHHCCEEEEecC---CCCeEEEec-ccCCCHHHHHHHHHHHHhh
Confidence                  13567777777785443322   346799998 4778999999999998764

>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*

Probab=99.94  E-value=1.7e-24  Score=218.79  Aligned_cols=332  Identities=12%  Similarity=0.103  Sum_probs=220.1

Q ss_pred             HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842          105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE  184 (499)
Q Consensus       105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~  184 (499)
                      .+.+.+...+......|..++...++|++    +++++|.+..         +++++||+|+..++.+.+-.        
T Consensus        18 ~~~~a~~~~l~~~~~~~~~~~~~~~l~~~----la~~~~~~~~---------i~~~sGt~al~~~l~~l~~~--------   76 (388)
T 1b9h_A           18 AERNGLVRALEQGQWWRMGGDEVNSFERE----FAAHHGAAHA---------LAVTNGTHALELALQVMGVG--------   76 (388)
T ss_dssp             HHHHHHHHHHHTSCCBTTTCSHHHHHHHH----HHHHTTCSEE---------EEESCHHHHHHHHHHHTTCC--------
T ss_pred             HHHHHHHHHHHcCCeeecCCHHHHHHHHH----HHHHhCCCeE---------EEeCCHHHHHHHHHHHcCCC--------
Confidence            34445555554332345556667777776    7788887643         66666799999888776211        


Q ss_pred             ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842          185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN  264 (499)
Q Consensus       185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~  264 (499)
                        ++..|+++..+|.++..+++..|+   +++.+|++++ +|.+|+++|+++|++++      .+|+   +++++|.+.|
T Consensus        77 --~gd~Vi~~~~~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~i~~~~------~~v~---~~n~tG~~~~  141 (388)
T 1b9h_A           77 --PGTEVIVPAFTFISSSQAAQRLGA---VTVPVDVDAA-TYNLDPEAVAAAVTPRT------KVIM---PVHMAGLMAD  141 (388)
T ss_dssp             --TTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCTT-TCCBCHHHHHHHCCTTE------EEEC---CBCGGGCCCC
T ss_pred             --CcCEEEECCCccHHHHHHHHHcCC---EEEEEecCCC-cCCCCHHHHHHhcCcCc------eEEE---EeCCccCcCC
Confidence              456789999999999999999999   9999999864 37899999999986432      2444   7889999999


Q ss_pred             hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchh--HHHhhcCCcc
Q 010842          265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGL--LVKALSTDPE  342 (499)
Q Consensus       265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~--l~~~~~~~~~  342 (499)
                      +++|+++|++||+++|+|++|+.+......  . ...+..+++.+++.||++.++ .+|+++.+++..  +....... .
T Consensus       142 l~~i~~la~~~~~~li~D~a~~~g~~~~~~--~-~~~~~~i~~~S~s~~K~l~g~-~~G~~~~~~~~~~~~~~~~~~~-~  216 (388)
T 1b9h_A          142 MDALAKISADTGVPLLQDAAHAHGARWQGK--R-VGELDSIATFSFQNGKLMTAG-EGGAVVFPDGETEKYETAFLRH-S  216 (388)
T ss_dssp             HHHHHHHHHHHTCCBCEECTTCTTCEETTE--E-GGGSSSCEEEECCTTSSSCSS-SCEEEEECTTCHHHHHHHHHHT-B
T ss_pred             HHHHHHHHHHcCCEEEEecchhcCCccCCe--e-cccccceEEEEccCCCcccCC-CeEEEEECCHHHHHHHHHHHHH-h
Confidence            999999999999999999999865432111  1 112224788889999999765 568888776533  32221111 0


Q ss_pred             CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-----C-C
Q 010842          343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-----R-H  416 (499)
Q Consensus       343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-----~-~  416 (499)
                      + ....    ....+.......+.+...+..++.+..  .+.+++.+++..++++++.+.|+++|++++..+     + .
T Consensus       217 ~-~~~~----~~~~~~~~~~g~~~~~~~~~~a~~~~~--~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~  289 (388)
T 1b9h_A          217 C-GRPR----DDRRYFHKIAGSNMRLNEFSASVLRAQ--LARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNS  289 (388)
T ss_dssp             T-TCCT----TCSSCCCCSCCCBCBCBHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCC
T ss_pred             C-CCCc----cCccceeecccccCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccc
Confidence            0 0000    000010001111112334444444333  356778888888999999999999999987752     2 2


Q ss_pred             ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee-eE--C--------------------------CEEEEEE
Q 010842          417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT-IV--G--------------------------GLYMLRF  467 (499)
Q Consensus       417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~--~--------------------------g~~~lRi  467 (499)
                      .+++++++.+..       .....++.+.|.++|+.+.... ..  .                          ....+|+
T Consensus       290 ~~~~~~~~~~~~-------~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l  362 (388)
T 1b9h_A          290 HYMAMFRIPGLT-------EERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWL  362 (388)
T ss_dssp             CSEEEEECTTCC-------HHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEE
T ss_pred             eEEEEEEeCCcC-------cccHHHHHHHHHHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEe
Confidence            467777775421       1224667888888887543321 10  0                          0136999


Q ss_pred             eccCCCC-cHHHHHHHHHHHHHHHHH
Q 010842          468 AVGASLT-DERHVVAAWELIMEGADR  492 (499)
Q Consensus       468 ~~~~~~~-t~~di~~l~~~l~~~~~~  492 (499)
                      ++. +.+ |++||++++++|+++.++
T Consensus       363 ~~~-~~~~t~edi~~~~~~l~~~~~~  387 (388)
T 1b9h_A          363 HHR-VLLAGEPELHATAEIIADAVAR  387 (388)
T ss_dssp             EGG-GGGSCHHHHHHHHHHHHHHHHH
T ss_pred             cCC-CCCCCHHHHHHHHHHHHHHHhh
Confidence            994 788 999999999999988754

>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*

Probab=99.94  E-value=2.9e-24  Score=220.00  Aligned_cols=301  Identities=12%  Similarity=0.070  Sum_probs=212.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      .....++.+++++++|.+..         +++++||+||..++.+...           ++..|+++...|.++..+++.
T Consensus       108 ~~~~~~l~~~la~~~g~~~~---------i~~~sGs~a~~~al~~l~~-----------~gd~vl~~~~~h~~~~~~~~~  167 (427)
T 2w8t_A          108 FHDHMEVEQALRDFYGTTGA---------IVFSTGYMANLGIISTLAG-----------KGEYVILDADSHASIYDGCQQ  167 (427)
T ss_dssp             CHHHHHHHHHHHHHHTCSEE---------EEESCHHHHHHHHHHHHSC-----------TTCEEEEETTCCHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhCCCce---------EEecCcHHHHHHHHHHhcC-----------CCCEEEECCcccHHHHHHHHH
Confidence            45666677778999988643         8888899999887776522           466788899999999999999


Q ss_pred             hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842          208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG  287 (499)
Q Consensus       208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~  287 (499)
                      .|.   +++.+|       .+|+++|++++++...  ..+.+|+++.++|++|.+.|+++|+++|++||+++++|++|++
T Consensus       168 ~g~---~~~~~~-------~~d~~~le~~l~~~~~--~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~  235 (427)
T 2w8t_A          168 GNA---EIVRFR-------HNSVEDLDKRLGRLPK--EPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSM  235 (427)
T ss_dssp             SCS---EEEEEC-------TTCHHHHHHHHHTSCS--SSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTT
T ss_pred             cCC---eeEEeC-------CCCHHHHHHHHHhccC--CCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccc
Confidence            998   888776       3589999999875211  1456888889999999999999999999999999999999988


Q ss_pred             hhccCccchhhh--cCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC-ccCCCCCCCCCCCcccCCCcccC
Q 010842          288 SACICPEFRHYL--NGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD-PEYLKNKPSESNSVVDFKDWQVG  363 (499)
Q Consensus       288 ~~~~~~~~~~~~--~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~  363 (499)
                      +.+. +..+...  .++ ..+|+++.++||+++.| | |+++.++. .. +.+... ..|...                 
T Consensus       236 ~~~~-~~g~~~~~~~~~~~~~di~~~s~sK~~g~~-g-G~v~~~~~-l~-~~l~~~~~~~~~~-----------------  293 (427)
T 2w8t_A          236 GFFG-PNGRGVYEAQGLEGQIDFVVGTFSKSVGTV-G-GFVVSNHP-KF-EAVRLACRPYIFT-----------------  293 (427)
T ss_dssp             TTSS-TTSCCHHHHTTCTTCCSEEEEESSSTTCSC-C-EEEEECCT-TG-GGGGGTCHHHHSS-----------------
T ss_pred             cccC-CCCCchHhhcCCCcCCcEEEecchhhhccC-C-CEEEeCHH-HH-HHHHHhccccccc-----------------
Confidence            6543 1111111  222 35799999999999843 4 88877643 22 222211 112111                 


Q ss_pred             CCCCCCcHHH---HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-CceEEEEEecCCCCCCcchhHHHH
Q 010842          364 TGRRFKSLRL---WMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-HFALVCFRLNPYPHSGSADTEMLN  439 (499)
Q Consensus       364 ~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~  439 (499)
                      +  ....+.+   ..+++.+  +.++++.++..++++++.+.|++. ++++..++ ..+++++.+..         ....
T Consensus       294 ~--~~~~~~~aa~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~---------~~~~  359 (427)
T 2w8t_A          294 A--SLPPSVVATATTSIRKL--MTAHEKRERLWSNARALHGGLKAM-GFRLGTETCDSAIVAVMLED---------QEQA  359 (427)
T ss_dssp             C--CCCHHHHHHHHHHHHHH--TSCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSSEEEEEESS---------HHHH
T ss_pred             C--CCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCCEEEEEECC---------HHHH
Confidence            1  1122222   2344443  224678888899999999999987 88876455 66777777743         2335


Q ss_pred             HHHHHHHHhcCCEEEEeee---ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhccC
Q 010842          440 RKLLDWVNSTGRVYLTHTI---VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGS  497 (499)
Q Consensus       440 ~~l~~~l~~~g~~~~~~~~---~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~~  497 (499)
                      .++.++|.++|+.+.....   ..+..++|+++. ..+|++||++++++|+++.+++.+..
T Consensus       360 ~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~-~~~t~e~i~~~~~~l~~~l~~~~~~~  419 (427)
T 2w8t_A          360 AMMWQALLDGGLYVNMARPPATPAGTFLLRCSIC-AEHTPAQIQTVLGMFQAAGRAVGVIG  419 (427)
T ss_dssp             HHHHHHHHHTTEECEEECTTTSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHHTCC-
T ss_pred             HHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeC-CCCCHHHHHHHHHHHHHHHHHhCccc
Confidence            6788888888854433221   124578999995 77899999999999999988876543

>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1

Probab=99.94  E-value=4.2e-25  Score=224.71  Aligned_cols=330  Identities=11%  Similarity=0.043  Sum_probs=224.1

Q ss_pred             HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842          105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE  184 (499)
Q Consensus       105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~  184 (499)
                      .+.+.+...+......|...++..++++++.+|+.+.+|++...     ...++|+|||+|+..++.+...         
T Consensus        58 ~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~-----~~v~~t~g~~~al~~~~~~l~~---------  123 (406)
T 1xi9_A           58 HMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITP-----DDVRVTAAVTEALQLIFGALLD---------  123 (406)
T ss_dssp             HHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCC---------
T ss_pred             HHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCH-----HHEEEcCChHHHHHHHHHHhCC---------
Confidence            34444444444333345555667899999999999988764321     2569999999999988877632         


Q ss_pred             ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842          185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN  264 (499)
Q Consensus       185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~  264 (499)
                        ++..|+++..+|.++..+++..|+   +++.+|++++++|.+|+++|+++++++      +.+|+++.++|++|.+-|
T Consensus       124 --~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~nptG~~~~  192 (406)
T 1xi9_A          124 --PGDEILVPGPSYPPYTGLVKFYGG---KPVEYRTIEEEDWQPDIDDIRKKITDR------TKAIAVINPNNPTGALYD  192 (406)
T ss_dssp             --TTCEEEEEESCCHHHHHHHHHTTC---EEEEEEEEGGGTSEECHHHHHHHCCTT------EEEEEEESSCTTTCCCCC
T ss_pred             --CCCEEEEcCCCCccHHHHHHHcCC---EEEEeecCCCcCCcCCHHHHHHhhCcC------ceEEEEECCCCCCCCCcC
Confidence              456788899999999999999999   999999875334789999999998642      446778889999999855


Q ss_pred             ---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCC-CCC-ceeEecccccccCC-CcceEEE--EeCc---hhH
Q 010842          265 ---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI-ERV-DSFSFSPHKWLLSY-LDCCCLW--VKQP---GLL  333 (499)
Q Consensus       265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~-~~a-Dsi~~~~hK~l~~p-~~~g~l~--~r~~---~~l  333 (499)
                         +++|+++|++||+|+++|++|+++.. ...... +..+ ... |.++.++||+++.| ..+|+++  .++.   +..
T Consensus       193 ~~~l~~i~~~a~~~~~~li~De~~~~~~~-~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~  270 (406)
T 1xi9_A          193 KKTLEEILNIAGEYEIPVISDEIYDLMTY-EGEHIS-PGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVR  270 (406)
T ss_dssp             HHHHHHHHHHHHHHTCCEEEECTTTTCBS-SSCCCC-HHHHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHH
T ss_pred             HHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCC-HHHcCCCceEEEEeccccccCCCccEEEEEEEecCchhHHHHH
Confidence               99999999999999999999988654 211111 1111 235 77888999999743 3478888  4331   322


Q ss_pred             HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010842          334 VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI  411 (499)
Q Consensus       334 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~  411 (499)
                       +.+.....+..                   +  ...+..+++...+  +.++++++.++..++++++.+.|+++|++++
T Consensus       271 -~~l~~~~~~~~-------------------~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~  328 (406)
T 1xi9_A          271 -EAIDRLARIRL-------------------C--PNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGIST  328 (406)
T ss_dssp             -HHHHHHHHHTC-------------------C--SCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred             -HHHHHHHHhhc-------------------C--CCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCee
Confidence             22211111100                   0  0123333333333  4456788888899999999999999989887


Q ss_pred             EcCCCceEEEE-EecCC-CCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842          412 VVPRHFALVCF-RLNPY-PHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELI  486 (499)
Q Consensus       412 ~~~~~~~~v~f-~~~~~-~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l  486 (499)
                      .. +..+.++| .+... +    .    ...++.++|. +.|+.+..+..+.  +..++|+++.   +++++|++++++|
T Consensus       329 ~~-~~~~~~~~~~~~~~~~----~----~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~---~~~~~i~~~~~~l  396 (406)
T 1xi9_A          329 TK-PQGAFYIFPKIEVGPW----K----NDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL---PPIEILEEAMDRF  396 (406)
T ss_dssp             CC-CCBSSEECCEECSCSC----S----SHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC---SCHHHHHHHHHHH
T ss_pred             ec-CCeeEEEEEecCccCC----C----CHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEec---CCHHHHHHHHHHH
Confidence            64 44344443 45321 1    0    1355677776 6785544433332  2467999985   7899999999999


Q ss_pred             HHHHHHHhc
Q 010842          487 MEGADRLFK  495 (499)
Q Consensus       487 ~~~~~~l~~  495 (499)
                      .++.+++.+
T Consensus       397 ~~~l~~~~~  405 (406)
T 1xi9_A          397 EKFMKERLK  405 (406)
T ss_dssp             HHHHHHC--
T ss_pred             HHHHHHHhc
Confidence            999877643

>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.94  E-value=2.3e-25  Score=224.49  Aligned_cols=352  Identities=13%  Similarity=0.070  Sum_probs=227.3

Q ss_pred             ccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHH
Q 010842           90 PNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVT  169 (499)
Q Consensus        90 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~a  169 (499)
                      |+++.+.|++...+..+.+.+......   .+  +|.......+++++++++++.....   .....++|+|||+|+..+
T Consensus         4 ~~~~~~~p~p~~~~~~v~~a~~~~~~~---~~--~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~v~~~~g~t~al~~~   75 (385)
T 2bkw_A            4 SVDTLLIPGPIILSGAVQKALDVPSLG---HT--SPEFVSIFQRVLKNTRAVFKSAAAS---KSQPFVLAGSGTLGWDIF   75 (385)
T ss_dssp             CCCEECSSSSCCCCHHHHHTTSCCCCC---TT--SHHHHHHHHHHHHHHHHHTTCCGGG---TCEEEEEESCTTHHHHHH
T ss_pred             ccceeecCCCcCchHHHHHHHhccccc---cC--CHHHHHHHHHHHHHHHHHhCCCCCC---CCceEEEcCchHHHHHHH
Confidence            456777777776665555555443321   12  5555556666788899998874210   001468999999999998


Q ss_pred             HHHHHHHHHhHhhhhccCCeEEEcCCC--CchhHHHHHHHhCCCCCCeEEeeC-CCCCCCccCHHHHHHHHHHHHHcCCc
Q 010842          170 LIAARDRALDAVGAENMHKLVVYGSDQ--THSTFAKVCKLAGVSPANIRALPT-SVDANFSLSPQLLRRAVEADVEAGLV  246 (499)
Q Consensus       170 l~~ar~~~~~~~~~~g~~~~~i~~s~~--~H~s~~ka~~~~G~g~~~v~~v~~-~~~~~~~~d~~~L~~~i~~~~~~g~~  246 (499)
                      +.+.....        .++..|++...  .|.++.++++..|+   +++.||+ +.  ++.+|+++|+++|++.     .
T Consensus        76 ~~~~~~~~--------~~gd~vlv~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~~d~~~l~~~l~~~-----~  137 (385)
T 2bkw_A           76 ASNFILSK--------APNKNVLVVSTGTFSDRFADCLRSYGA---QVDVVRPLKI--GESVPLELITEKLSQN-----S  137 (385)
T ss_dssp             HHHHSCTT--------CSCCEEEEECSSHHHHHHHHHHHHTTC---EEEEECCSST--TSCCCHHHHHHHHHHS-----C
T ss_pred             HHHHhccC--------CCCCeEEEEcCCcchHHHHHHHHHcCC---ceEEEecCCC--CCCCCHHHHHHHHhcC-----C
Confidence            88763100        13445544433  34455577888899   9999998 64  3589999999999761     1


Q ss_pred             cEEEEEecCCCcccccCChhHHHHHHHHh--CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceE
Q 010842          247 PLFLCATVGTTSTTAVDNVEPLAEVANEY--GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCC  324 (499)
Q Consensus       247 p~~vv~t~gtt~~G~id~l~~I~~ia~~~--~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~  324 (499)
                      +.+|++++++|++|.+.|+++|+++|++|  |+|+|+|++|+.+....+     +... .+|++++++|||+++|.|+|+
T Consensus       138 ~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~-----~~~~-~~d~~~~s~~K~~~~~~G~G~  211 (385)
T 2bkw_A          138 YGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFE-----FDEW-GVDFALTASQKAIGAPAGLSI  211 (385)
T ss_dssp             CSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCC-----TTTT-TCSEEEEESSSTTCCCSCEEE
T ss_pred             CCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCcccc-----cccc-CceEEEecCccccccCCcceE
Confidence            34788899999999999999999999999  999999999975433211     1111 379999999999998889999


Q ss_pred             EEEeCchhHHHhhc-----CCccCCCCCCCCCCCcccC-CCcccC-CCC--CCC---cHHHHHHHHHhcHHHHHHHHHHH
Q 010842          325 LWVKQPGLLVKALS-----TDPEYLKNKPSESNSVVDF-KDWQVG-TGR--RFK---SLRLWMVLRSYGVLNLQSHIRSD  392 (499)
Q Consensus       325 l~~r~~~~l~~~~~-----~~~~yl~~~~~~~~~~~~~-~~~~~~-~sr--~~~---al~~~~~l~~~g~~g~~~~~~~~  392 (499)
                      ++++++. +.+.+.     ....|.....    ..... ..+... ..+  ...   ...+..+++.+...+++++.++.
T Consensus       212 ~~~~~~~-~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~  286 (385)
T 2bkw_A          212 SLCSSRF-MDYALNDSKNGHVHGYFSSLR----RWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLH  286 (385)
T ss_dssp             EEECHHH-HHHHTCHHHHCCCSCSTTCHH----HHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHH
T ss_pred             EEEcHHH-HHHHHhhccCCCCCceeecHH----HHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHH
Confidence            9987643 221221     0111110000    00000 000000 001  011   12344555555455688889999


Q ss_pred             HHHHHHHHHHH-hcCCCeEEEcC-C----CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE--CCEEE
Q 010842          393 IRLAKMFEGFV-KSDPRFEIVVP-R----HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV--GGLYM  464 (499)
Q Consensus       393 ~~~a~~l~~~L-~~~~~~~~~~~-~----~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~g~~~  464 (499)
                      .++++++.+.| +++ +++++.+ +    ..++++|++..            ..++.++|.++|+. +.+...  .+..+
T Consensus       287 ~~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~~gi~-v~~g~~~~~~~~~  352 (385)
T 2bkw_A          287 REMSDWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYVAD------------PPDVIAFLKSHGVV-IAGGIHKDIGPKY  352 (385)
T ss_dssp             HHHHHHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEECSC------------HHHHHHHHHHTTEE-CBCCCCTTTGGGE
T ss_pred             HHHHHHHHHHHHHhc-CceecccCcccccCCceEEEecCC------------HHHHHHHHHHCCeE-EeCCCCcccCCCE
Confidence            99999999999 888 8887742 1    35677777632            35677777777744 333221  13468


Q ss_pred             EEEe-cc-C-CCCcHHHHHHHHHHHHHHHHH
Q 010842          465 LRFA-VG-A-SLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       465 lRi~-~~-~-~~~t~~di~~l~~~l~~~~~~  492 (499)
                      +|++ +. + ..+|++|+++++++|+++.++
T Consensus       353 iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~  383 (385)
T 2bkw_A          353 IRIGHMGVTACNKNLPYMKNCFDLIKLALQR  383 (385)
T ss_dssp             EEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred             EEEEccccccccCCHHHHHHHHHHHHHHHHh
Confidence            9999 53 1 247999999999999987543

>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.93  E-value=3.4e-25  Score=225.63  Aligned_cols=327  Identities=13%  Similarity=0.082  Sum_probs=228.7

Q ss_pred             HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842          105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE  184 (499)
Q Consensus       105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~  184 (499)
                      .+.+.+ ..+......|...++..++++++.+|+.+.+|.+...     ...++|+|||+|+..++.+...         
T Consensus        60 ~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~v~~~~g~t~a~~~~~~~~~~---------  124 (409)
T 2gb3_A           60 VFFERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKP-----ENVLVTNGGSEAILFSFAVIAN---------  124 (409)
T ss_dssp             HHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCG-----GGEEEESHHHHHHHHHHHHHCC---------
T ss_pred             HHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCH-----HHEEEeCCHHHHHHHHHHHhCC---------
Confidence            345555 6665433456656667899999999999988864321     2469999999999998887632         


Q ss_pred             ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC-
Q 010842          185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD-  263 (499)
Q Consensus       185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id-  263 (499)
                        ++..|+++..+|.++..+++..|.   +++.+|.++++++.+ +++|+++++++      +.+|+++.++|++|.+- 
T Consensus       125 --~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~-~~~l~~~l~~~------~~~v~~~~p~nptG~~~~  192 (409)
T 2gb3_A          125 --PGDEILVLEPFYANYNAFAKIAGV---KLIPVTRRMEEGFAI-PQNLESFINER------TKGIVLSNPCNPTGVVYG  192 (409)
T ss_dssp             --TTCEEEEEESCCTHHHHHHHHHTC---EEEEEECCGGGTSCC-CTTGGGGCCTT------EEEEEEESSCTTTCCCCC
T ss_pred             --CCCEEEEcCCCchhHHHHHHHcCC---EEEEeccCCCCCCcc-HHHHHHhhCcC------CeEEEECCCCCCCCCCcC
Confidence              456788899999999999999999   999999875334666 88998887542      44778889999999984 


Q ss_pred             --ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCC
Q 010842          264 --NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD  340 (499)
Q Consensus       264 --~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~  340 (499)
                        ++++|+++|++||+++++|++|+++.... .....+.++...|+++.++||+++.| ..+|++++++++.. +.+...
T Consensus       193 ~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~-~~l~~~  270 (409)
T 2gb3_A          193 KDEMRYLVEIAERHGLFLIVDEVYSEIVFRG-EFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELI-SHAMKL  270 (409)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHH-HHHHHH
T ss_pred             HHHHHHHHHHHHHcCCEEEEECcccccccCC-CCCCccccCCCCEEEEecchhccCCccceEEEEEECcHHHH-HHHHHH
Confidence              58999999999999999999998764321 11222334445799999999999744 34899988773322 222110


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA  418 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~  418 (499)
                      ..+.                    + ....+..+++...+  +.++++++.++..++++++.+.|++. +++++..+..+
T Consensus       271 ~~~~--------------------~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~  328 (409)
T 2gb3_A          271 AQGR--------------------L-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH-GLKRFTKPSGA  328 (409)
T ss_dssp             HHHS--------------------C-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCBCCCSBS
T ss_pred             Hhcc--------------------C-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc-CceeeeCCCee
Confidence            0000                    0 11233344444444  56778888899999999999999988 78772234433


Q ss_pred             E-EEEEecCCCCCCcchhHHHHHHHHHHHHhc------CCEEEEeeeE-----CCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842          419 L-VCFRLNPYPHSGSADTEMLNRKLLDWVNST------GRVYLTHTIV-----GGLYMLRFAVGASLTDERHVVAAWELI  486 (499)
Q Consensus       419 ~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~~~~~~~~~-----~g~~~lRi~~~~~~~t~~di~~l~~~l  486 (499)
                      . +++++....          ..++.++|.++      |+.+..+..+     .+..++|+++.   +++++|++++++|
T Consensus       329 ~~~~~~~~~~~----------~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~---~~~e~i~~~~~~l  395 (409)
T 2gb3_A          329 FYITAELPVED----------AEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV---LEKDLLSRAIDVL  395 (409)
T ss_dssp             SEEEEECSSSC----------HHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC---SCHHHHHHHHHHH
T ss_pred             EEEEEEeCCCC----------HHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeC---CCHHHHHHHHHHH
Confidence            3 444553211          35677777766      7544433333     23568999985   7999999999999


Q ss_pred             HHHHHHHhc
Q 010842          487 MEGADRLFK  495 (499)
Q Consensus       487 ~~~~~~l~~  495 (499)
                      +++.+++.+
T Consensus       396 ~~~l~~~~~  404 (409)
T 2gb3_A          396 MEGLKMFCS  404 (409)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHhhh
Confidence            999887754

>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1

Probab=99.93  E-value=1.9e-25  Score=222.60  Aligned_cols=303  Identities=15%  Similarity=0.090  Sum_probs=207.8

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH--
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV--  204 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka--  204 (499)
                      ...++.++.+|+++++| ++.       ..++|+|||+|+..++.+++.           ++..|+++..+|++...+  
T Consensus        41 ~~~~~~~l~~~la~~~g-~~~-------~v~~~~~gt~a~~~al~~~~~-----------~gd~vi~~~~~~~~~~~~~~  101 (356)
T 1v72_A           41 TDELTAQVKRKFCEIFE-RDV-------EVFLVPTGTAANALCLSAMTP-----------PWGNIYCHPASHINNDECGA  101 (356)
T ss_dssp             CSHHHHHHHHHHHHHHT-SCC-------EEEEESCHHHHHHHHHHTSCC-----------TTEEEEECTTSHHHHSSTTH
T ss_pred             cchHHHHHHHHHHHHhC-CCC-------cEEEeCCccHHHHHHHHHhcC-----------CCCEEEEcCccchhhhhchH
Confidence            34567778888999999 432       358999999999998887642           567888899999998877  


Q ss_pred             HHHh--CCCCCCeEEeeCCCCCCCccCHHHHHH-HHHHHH-HcCCccEEEEEecCCCcccc---cCChhHHHHHHHHhCC
Q 010842          205 CKLA--GVSPANIRALPTSVDANFSLSPQLLRR-AVEADV-EAGLVPLFLCATVGTTSTTA---VDNVEPLAEVANEYGI  277 (499)
Q Consensus       205 ~~~~--G~g~~~v~~v~~~~~~~~~~d~~~L~~-~i~~~~-~~g~~p~~vv~t~gtt~~G~---id~l~~I~~ia~~~~~  277 (499)
                      +..+  |.   +++.+|.+   ++.+|+++|++ ++++.. ..+.++.+|+++.+++ +|.   .+++++|+++|++||+
T Consensus       102 ~~~~~~g~---~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~  174 (356)
T 1v72_A          102 PEFFSNGA---KLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSL  174 (356)
T ss_dssp             HHHHTTSC---EEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTC
T ss_pred             HHHHhCCc---EEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCC
Confidence            7777  88   89999875   25899999999 886421 1122466788888664 999   6789999999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      |+|+|++|+.+............++ ..+|++++++||+ +.|.|+|+++.++ +...+ +.....+. +.         
T Consensus       175 ~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~-g~~~G~g~~~~~~-~~~~~-~~~~~~~~-~~---------  241 (356)
T 1v72_A          175 GLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKN-GVLAAEAIVLFNT-SLATE-MSYRRKRA-GH---------  241 (356)
T ss_dssp             EEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGG-TCSSCEEEEESSG-GGHHH-HHHHHHHT-TC---------
T ss_pred             eEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccC-CCcCccEEEEECH-HHHhh-HHHHhhcc-Cc---------
Confidence            9999999975432111111111111 2589999999999 5688888887743 32221 11000000 00         


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhH
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTE  436 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~  436 (499)
                             . ...........+..+..+.+.++.++..++++++.+.|++++++++..++..+.+++++.           
T Consensus       242 -------~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~-----------  302 (356)
T 1v72_A          242 -------L-SSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTEANILFCRLD-----------  302 (356)
T ss_dssp             -------C-CSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCCSSEEEEEEC-----------
T ss_pred             -------h-hhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhCCCcEEccCCCccEEEEEcC-----------
Confidence                   0 000122233344555445566778888999999999999988999876666677766652           


Q ss_pred             HHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          437 MLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       437 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                         .++.++|.++|+.+..+. +. ..++|+++ +..+|++|+++++++|+++.++.
T Consensus       303 ---~~~~~~l~~~gi~v~~g~-~~-~~~iRi~~-~~~~~~~~i~~~~~~l~~~l~~~  353 (356)
T 1v72_A          303 ---SAMIDALLKAGFGFYHDR-WG-PNVVRFVT-SFATTAEDVDHLLNQVRLAADRT  353 (356)
T ss_dssp             ---HHHHHHHHHTTCBCBCSS-SS-TTEEEEEC-CTTCCHHHHHHHHHHHHHTC---
T ss_pred             ---HHHHHHHHhcCeEEeccc-cC-CCeEEEEe-cCCCCHHHHHHHHHHHHHHHHhh
Confidence               146677777786543322 32 46799997 47889999999999999876543

>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*

Probab=99.93  E-value=1.4e-24  Score=219.39  Aligned_cols=324  Identities=11%  Similarity=0.087  Sum_probs=223.8

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCC--CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKL--PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~--~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      ..+.+.+...+......|..  ...++++++.+++++.+|.  +.+       ..++|+|||+|+..++.+..+      
T Consensus        48 ~~v~~a~~~~~~~~~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~-------~v~~~~g~~~a~~~~~~~~~~------  112 (391)
T 4dq6_A           48 PCIIDSLKNRLEQEIYGYTT--RPDSYNESIVNWLYRRHNWKIKSE-------WLIYSPGVIPAISLLINELTK------  112 (391)
T ss_dssp             HHHHHHHHHHHTTCCCCCBC--CCHHHHHHHHHHHHHHHCCCCCGG-------GEEEESCHHHHHHHHHHHHSC------
T ss_pred             HHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHHHHHHhCCCCcHH-------HeEEcCChHHHHHHHHHHhCC------
Confidence            34455555555543344433  3588999999999999994  333       469999999999888877632      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC--CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS--VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST  259 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~--~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~  259 (499)
                           ++..|+++..+|.++..+++..|.   +++.+|++  .+++|.+|+++|++++++       +.+|+++.++|++
T Consensus       113 -----~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~v~i~~p~npt  177 (391)
T 4dq6_A          113 -----ANDKIMIQEPVYSPFNSVVKNNNR---ELIISPLQKLENGNYIMDYEDIENKIKD-------VKLFILCNPHNPV  177 (391)
T ss_dssp             -----TTCEEEECSSCCTHHHHHHHHTTC---EEEECCCEECTTSCEECCHHHHHHHCTT-------EEEEEEESSBTTT
T ss_pred             -----CCCEEEEcCCCCHHHHHHHHHcCC---eEEeeeeeecCCCceEeeHHHHHHHhhc-------CCEEEEECCCCCC
Confidence                 456788999999999999999999   99999988  556688999999999865       3478888999999


Q ss_pred             ccc---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCC----CCCceeEecccccccC-CCcceEEEEeCch
Q 010842          260 TAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI----ERVDSFSFSPHKWLLS-YLDCCCLWVKQPG  331 (499)
Q Consensus       260 G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~----~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~  331 (499)
                      |.+   +++++|+++|++||+++++|++|+.+......... +..+    .....++.+.||+++. ...+|+++.+++.
T Consensus       178 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~  256 (391)
T 4dq6_A          178 GRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIP-MASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEK  256 (391)
T ss_dssp             TBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHH
T ss_pred             CcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccC-HHHcCccccCcEEEEEechhhccCcccceEEEEeCCHH
Confidence            999   78999999999999999999999875432111111 1111    0133778899999973 4568888887644


Q ss_pred             hHHHhhcCC-ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc-CC
Q 010842          332 LLVKALSTD-PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKS-DP  407 (499)
Q Consensus       332 ~l~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~-~~  407 (499)
                      .. +.+... ..+...                    ....+...++...+  +.+.++++.++..++++++.+.|++ +|
T Consensus       257 ~~-~~~~~~~~~~~~~--------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  315 (391)
T 4dq6_A          257 DY-KLLDDAFTRIDIK--------------------RNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINENMP  315 (391)
T ss_dssp             HH-HHHHHHHHHTTCC--------------------CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred             HH-HHHHHHHHhhcCC--------------------CCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence            32 222110 000000                    01223333333322  3456788888999999999999988 78


Q ss_pred             CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHH
Q 010842          408 RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWE  484 (499)
Q Consensus       408 ~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~  484 (499)
                      ++++..+.....+++.+....        ....++.++|.++ |+.+..+..+.  +..++|++++   +++++|+++++
T Consensus       316 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~i~~~l~  384 (391)
T 4dq6_A          316 KLKVRKPEGTYLLWVDFSALG--------LSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA---CPRSMLEEALI  384 (391)
T ss_dssp             TSEECCCSBSSEEEEECGGGC--------CCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC---SCHHHHHHHHH
T ss_pred             CCEecCCCccEEEEEEhhhcC--------CCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc---CCHHHHHHHHH
Confidence            998875443333345654311        0145678888887 75444433332  3478999986   68899999999


Q ss_pred             HHHHHH
Q 010842          485 LIMEGA  490 (499)
Q Consensus       485 ~l~~~~  490 (499)
                      +|.++.
T Consensus       385 ~l~~~l  390 (391)
T 4dq6_A          385 RIKNAI  390 (391)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            998764

>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*

Probab=99.93  E-value=1.4e-25  Score=224.92  Aligned_cols=300  Identities=14%  Similarity=0.117  Sum_probs=212.4

Q ss_pred             hHHHHHHHHHH-HHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH
Q 010842          127 STELEIVVMDW-LATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC  205 (499)
Q Consensus       127 ~~~lE~~~~~~-la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~  205 (499)
                      ......++.++ +++++|.+ .        .++|+|||+|+..++.++..           ++..|+++..+|+++..++
T Consensus        51 ~~~~~~~l~~~~la~~~~~~-~--------v~~~~g~t~a~~~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~  110 (371)
T 2e7j_A           51 KTPPIHDFIHNQLPKFLGCD-V--------ARVTNGAREAKFAVMHSLAK-----------KDAWVVMDENCHYSSYVAA  110 (371)
T ss_dssp             --CCHHHHHHTHHHHHTTSS-E--------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHcCCC-E--------EEEeCChHHHHHHHHHHHhC-----------CCCEEEEccCcchHHHHHH
Confidence            34456677888 99999987 4        48999999999998887732           4668999999999999999


Q ss_pred             HHhCCCCCCeEEee--CCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeec
Q 010842          206 KLAGVSPANIRALP--TSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDA  283 (499)
Q Consensus       206 ~~~G~g~~~v~~v~--~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~  283 (499)
                      +..|+   +++.+|  .+++  +.+|+++|++++++.... ..+.+|+++.++|++|.+.|+++|.++|++||+|+|+|+
T Consensus       111 ~~~g~---~~~~v~~~~~~~--~~~d~~~l~~~l~~~~~~-~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~  184 (371)
T 2e7j_A          111 ERAGL---NIALVPKTDYPD--YAITPENFAQTIEETKKR-GEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNG  184 (371)
T ss_dssp             HHTTC---EEEEECCCCTTT--CCCCHHHHHHHHHHHTTT-SCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEEC
T ss_pred             HHcCC---eEEEeecccCCC--CCcCHHHHHHHHHhhccc-CCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEEC
Confidence            99999   999999  7653  699999999999754221 245689999999999999999999999999999999999


Q ss_pred             cccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHh-hcCC-ccCCCCCCCCCCCcccCCCcc
Q 010842          284 AYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKA-LSTD-PEYLKNKPSESNSVVDFKDWQ  361 (499)
Q Consensus       284 A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~-~~~~-~~yl~~~~~~~~~~~~~~~~~  361 (499)
                      +|+.+....+ ...  .   .+|++++++||+++.|.++|+++++++. . +. +... ..+..             +..
T Consensus       185 a~~~~~~~~~-~~~--~---~~di~~~s~sK~~~~~~~~G~~~~~~~~-~-~~~~~~~~~~~~~-------------~~~  243 (371)
T 2e7j_A          185 AYAIGRMPVS-LKE--I---GADFIVGSGHKSMAASGPIGVMGMKEEW-A-EIVLRRSEKYKNK-------------EVE  243 (371)
T ss_dssp             TTTBTTBCCC-HHH--H---TCSEEEEEHHHHSSCCSSCEEEEECTTT-T-TTTTCBCSSCTTS-------------BGG
T ss_pred             ccccCCCCCC-hhh--c---CCCEEEecCCcCCCCCCCcEEEEEechh-h-hhhccccccCccc-------------ccc
Confidence            9988654211 111  1   3789999999999998899999998642 1 11 1110 00110             000


Q ss_pred             cCCCCCCCcH---HHHHHHHHhcHHHHHHHHHHH--HHHHHHHHHHHhcCCCeEEEcCC--CceEEEEEecCCCCCCcch
Q 010842          362 VGTGRRFKSL---RLWMVLRSYGVLNLQSHIRSD--IRLAKMFEGFVKSDPRFEIVVPR--HFALVCFRLNPYPHSGSAD  434 (499)
Q Consensus       362 ~~~sr~~~al---~~~~~l~~~g~~g~~~~~~~~--~~~a~~l~~~L~~~~~~~~~~~~--~~~~v~f~~~~~~~~~~~~  434 (499)
                      ...+. ....   .+..+++.+..    ++.++.  .++++++.+.|++. +++++.++  ..+++++++.  .      
T Consensus       244 ~~~~~-~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~--~------  309 (371)
T 2e7j_A          244 LLGCT-ARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAE--V------  309 (371)
T ss_dssp             GTTCC-CCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECH--H------
T ss_pred             cccCC-cCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEECC--C------
Confidence            01111 1122   22233433321    566677  88999999999988 89887553  4667777663  1      


Q ss_pred             hHHHHHHHHHHHHhcCCEEEEeeeE-C---C--EEEEE-EeccCCC-CcHHHHHHHHHHHHHHHHHH
Q 010842          435 TEMLNRKLLDWVNSTGRVYLTHTIV-G---G--LYMLR-FAVGASL-TDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       435 ~~~~~~~l~~~l~~~g~~~~~~~~~-~---g--~~~lR-i~~~~~~-~t~~di~~l~~~l~~~~~~l  493 (499)
                          ..++.+.|.+.|+.+. +... .   +  ..++| +++. .. ++++|+++++++|+++.+++
T Consensus       310 ----~~~~~~~l~~~gi~~~-~~~~~~~~~g~~~~~iRii~~~-~~~~~~~~i~~~~~~l~~~~~~~  370 (371)
T 2e7j_A          310 ----LYEISKKAKGGRFFLY-RELKSRKIHGIKPGLTRYFKLS-TYGLSDEEVDYVLNAFKEIIEKY  370 (371)
T ss_dssp             ----HHHHHHHSSSGGGHHH-HHHHHTTEECSCTTCCSEEEEE-CTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             ----HHHHHHHHHHCCEEEE-eccccccccCCCCCceEEEEee-ccCCCHHHHHHHHHHHHHHHHhc
Confidence                3556777777775432 2111 0   2  45799 9995 55 89999999999999987653

>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*

Probab=99.93  E-value=1e-24  Score=220.46  Aligned_cols=331  Identities=13%  Similarity=0.053  Sum_probs=225.1

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCcc-EEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGG-GVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~-g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      ..+.+.+...+......|...++..++++++.+|+.+.+|.+...     .. .++|+|||+|+..++.+..+       
T Consensus        42 ~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~~v~~~~g~~~a~~~~~~~~~~-------  109 (389)
T 1gd9_A           42 QHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADP-----KTEIMVLLGANQAFLMGLSAFLK-------  109 (389)
T ss_dssp             HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCT-----TTSEEEESSTTHHHHHHHTTTCC-------
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC-----CCeEEEcCChHHHHHHHHHHhCC-------
Confidence            345555555554333445555567899999999999988863211     14 69999999999888876532       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|+++..+|.++..+++..|+   +++.+|++++++|.+|+++|+++++++      +.+|+++.++|+||.+
T Consensus       110 ----~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~  176 (389)
T 1gd9_A          110 ----DGEEVLIPTPAFVSYAPAVILAGG---KPVEVPTYEEDEFRLNVDELKKYVTDK------TRALIINSPCNPTGAV  176 (389)
T ss_dssp             ----TTCEEEEEESCCTTHHHHHHHHTC---EEEEEECCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCCC
T ss_pred             ----CCCEEEEcCCCchhHHHHHHHCCC---EEEEeccCCccCCCCCHHHHHHhcCcC------ceEEEEECCCCCCCcC
Confidence                456788899999999999999999   999999875334789999999988642      4467788999999999


Q ss_pred             C---ChhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842          263 D---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA  336 (499)
Q Consensus       263 d---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~  336 (499)
                      -   ++++|+++|++||+++++|++|+++..........  +.+....|.++.++||+++.| ..+|++++++ ... +.
T Consensus       177 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~-~~  254 (389)
T 1gd9_A          177 LTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPS-WII-ER  254 (389)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCH-HHH-HH
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcCCcccceEEEEECH-HHH-HH
Confidence            6   59999999999999999999998865421111111  112234789999999998744 4479988864 222 22


Q ss_pred             hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHH--HHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVL--NLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~--g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                      +.....+...                    ....+..+++...+  +.+  +++++.++..++++++.+.|++. ++++.
T Consensus       255 l~~~~~~~~~--------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~  313 (389)
T 1gd9_A          255 MVKFQMYNAT--------------------CPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM-GLPTV  313 (389)
T ss_dssp             HHHHHTTTTC--------------------SCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCCC
T ss_pred             HHHHHhhhcc--------------------CCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc-CCeec
Confidence            2111111000                    01123333333333  234  67888888999999999999988 77766


Q ss_pred             cCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          413 VPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       413 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      .+.....+++.+....        ....++.++|. +.|+.+..+..+.  +..++|++++   .++++|+++++.|.++
T Consensus       314 ~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~---~~~~~i~~~l~~l~~~  382 (389)
T 1gd9_A          314 KPKGAFYIFPRIRDTG--------LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYA---TAYEKLEEAMDRMERV  382 (389)
T ss_dssp             CCCBTTEECCBCGGGT--------CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECC---SCHHHHHHHHHHHHHH
T ss_pred             CCCeeeEEEEeccCCC--------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec---CCHHHHHHHHHHHHHH
Confidence            4333333444553211        01356777776 6785544433332  2467999986   2889999999999988


Q ss_pred             HHHH
Q 010842          490 ADRL  493 (499)
Q Consensus       490 ~~~l  493 (499)
                      .++.
T Consensus       383 ~~~~  386 (389)
T 1gd9_A          383 LKER  386 (389)
T ss_dssp             HHHT
T ss_pred             HHhc
Confidence            7653

>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*

Probab=99.93  E-value=2.1e-24  Score=218.89  Aligned_cols=334  Identities=11%  Similarity=0.048  Sum_probs=225.6

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ..+.+.+...+......|...  ..++++++.+|+.+.+|.+...     ...++|+|||+|+..++.+...        
T Consensus        47 ~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~-----~~v~~t~g~~~a~~~~~~~l~~--------  111 (399)
T 1c7n_A           47 PELIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQT-----DWIINTAGVVPAVFNAVREFTK--------  111 (399)
T ss_dssp             HHHHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHHCC--------
T ss_pred             HHHHHHHHHHHhcCCCCCCCC--cHHHHHHHHHHHHHHhCCCCCh-----hhEEEcCCHHHHHHHHHHHhcC--------
Confidence            345555555543323344433  7889999999999988853211     1468999999999888876632        


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC-CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS-VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~-~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                         ++..|+++..+|.++..+++..|.   +++.+|.+ ++++|.+|+++|++++++.     .+.+|+++.++|++|.+
T Consensus       112 ---~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~g~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~  180 (399)
T 1c7n_A          112 ---PGDGVIIITPVYYPFFMAIKNQER---KIIECELLEKDGYYTIDFQKLEKLSKDK-----NNKALLFCSPHNPVGRV  180 (399)
T ss_dssp             ---TTCEEEECSSCCTHHHHHHHTTTC---EEEECCCEEETTEEECCHHHHHHHHTCT-----TEEEEEEESSBTTTTBC
T ss_pred             ---CCCEEEEcCCCcHhHHHHHHHcCC---EEEecccccCCCCEEEcHHHHHHHhccC-----CCcEEEEcCCCCCCCcC
Confidence               456788899999999999999999   99999986 3345779999999998621     24467788999999999


Q ss_pred             CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCC----CCCceeEecccccccCC-CcceEEEEeCchhHH
Q 010842          263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI----ERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLV  334 (499)
Q Consensus       263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~----~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~  334 (499)
                      -|   +++|+++|++||+++++|++|+++......... +..+    ...+.++.+.+|+++.| ..+|++++++++...
T Consensus       181 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~  259 (399)
T 1c7n_A          181 WKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTV-FQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRE  259 (399)
T ss_dssp             CCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCC-GGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHHH
T ss_pred             cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCccc-HHHcCccccCcEEEEEeChhhccccchheEEEEECCHHHHH
Confidence            88   999999999999999999999876432111111 1111    12457788999999744 457999987654332


Q ss_pred             HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEE
Q 010842          335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEI  411 (499)
Q Consensus       335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~  411 (499)
                      ........+-.                   + ....+..+++...+  +.+.+++..++..++++++.+.|++ +|++++
T Consensus       260 ~l~~~~~~~~~-------------------~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  319 (399)
T 1c7n_A          260 RFTKSRDATSG-------------------M-PFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKA  319 (399)
T ss_dssp             HHHHHHHHTTC-------------------C-CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBC
T ss_pred             HHHHHHhhccc-------------------C-CCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhhCCCCeE
Confidence            21111111100                   0 01233444443333  3567888888899999999999998 888876


Q ss_pred             EcCCCceEE-EEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          412 VVPRHFALV-CFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       412 ~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                      .. +..+.+ ++.+....        ....++.+.|. +.|+.+..+..+.  +..++|++++.   ++++|+++++.|.
T Consensus       320 ~~-~~~~~~~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~---~~~~l~~~l~~l~  387 (399)
T 1c7n_A          320 PL-IEGTYLQWIDFRALK--------MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAA---PSSVIQESLERLN  387 (399)
T ss_dssp             CC-CSBSSEEEEECGGGC--------CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHHHH
T ss_pred             ec-CCceEEEEEEcccCC--------CCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEecc---CHHHHHHHHHHHH
Confidence            54 444444 45664310        01356777886 6787655443332  34689999963   3789999999999


Q ss_pred             HHHHHHhcc
Q 010842          488 EGADRLFKG  496 (499)
Q Consensus       488 ~~~~~l~~~  496 (499)
                      ++.+++.+.
T Consensus       388 ~~l~~~~~~  396 (399)
T 1c7n_A          388 KALKDLKNR  396 (399)
T ss_dssp             HHHHHHC--
T ss_pred             HHHHHHHhc
Confidence            998877543

>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}

Probab=99.93  E-value=6.4e-24  Score=215.05  Aligned_cols=301  Identities=12%  Similarity=0.080  Sum_probs=214.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      .....++.+++++++|.+..         +++++||+|+..++.+..+           ++..|+++..+|.++..+++.
T Consensus        87 ~~~~~~l~~~la~~~~~~~~---------i~~~sGt~a~~~~l~~~~~-----------~gd~v~~~~~~~~~~~~~~~~  146 (399)
T 3tqx_A           87 QTIHKELEKDISEFLGTDDT---------ILYSSCFDANGGLFETLLG-----------PEDAIISDELNHASIIDGIRL  146 (399)
T ss_dssp             BHHHHHHHHHHHHHHTCSEE---------EEESCHHHHHHTTHHHHCC-----------TTCEEEEETTCCHHHHHHHHS
T ss_pred             chHHHHHHHHHHHHHCCCcE---------EEECchHHHHHHHHHHhcC-----------CCCEEEECCcccHHHHHHHHH
Confidence            45556667779999998753         7777789999887765532           567899999999999999999


Q ss_pred             hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842          208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG  287 (499)
Q Consensus       208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~  287 (499)
                      .|.   +++.+|.       +|+++|++.+++....+..+.+|+.+.++|++|.+.|+++|.++|++||+++|+|++|+.
T Consensus       147 ~g~---~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~  216 (399)
T 3tqx_A          147 CKA---QRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAV  216 (399)
T ss_dssp             CCS---EEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTT
T ss_pred             cCC---ceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccc
Confidence            999   8888875       477899999988665555678899999999999999999999999999999999999974


Q ss_pred             hhccCccchh--hhcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCC
Q 010842          288 SACICPEFRH--YLNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGT  364 (499)
Q Consensus       288 ~~~~~~~~~~--~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~  364 (499)
                      +... .....  ...++ ...|+++.+.||+++++.| |+++.++. ...........|....                 
T Consensus       217 ~~~~-~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~~~-~~~~~~~~~~~~~~~~-----------------  276 (399)
T 3tqx_A          217 GFIG-ENGRGTPEYCGVADRVDILTGTLGKALGGASG-GYTSGHKE-IIEWLRNRSRPYLFSN-----------------  276 (399)
T ss_dssp             TTSS-TTSCCHHHHHTCTTCCSEEEEESSSSSCSSCC-EEEEECHH-HHHHHHHHCHHHHSSC-----------------
T ss_pred             cccC-CCCCchHHhhCCCCCCcEEEecchHhcccCce-EEEEcCHH-HHHHHHHhCcceeccC-----------------
Confidence            3321 11111  12222 3579999999999985544 77776543 2222212122222110                 


Q ss_pred             CCCCCcHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHH
Q 010842          365 GRRFKSLRLWMVLRSYG--VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKL  442 (499)
Q Consensus       365 sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l  442 (499)
                        ....+.+.+.+..+.  .+++++..++..++++++.+.|++. ++++. ++..+++++.+..         .....++
T Consensus       277 --~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~---------~~~~~~~  343 (399)
T 3tqx_A          277 --TVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKL-GFQLV-PGNHPIIPVMLGD---------AQLATNM  343 (399)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCSSSEEEEEEEC---------HHHHHHH
T ss_pred             --CCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC---------HHHHHHH
Confidence              112233333333322  1567888899999999999999987 77765 5666777777653         2235678


Q ss_pred             HHHHHhcCCEEEEeee----ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          443 LDWVNSTGRVYLTHTI----VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       443 ~~~l~~~g~~~~~~~~----~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .++|.++|+.+. +..    ..+..++|+++. ..++++|+++++++|+++.+++
T Consensus       344 ~~~l~~~gi~v~-~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~  396 (399)
T 3tqx_A          344 ADHLLQEGIYVV-GFSYPVVPMGKARIRVQMS-AVHTQQQLDRAIEAFGQVGKKL  396 (399)
T ss_dssp             HHHHHHTTEECC-EECTTTSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHCCCEEe-eeCCCCCCCCCceEEEEee-cCCCHHHHHHHHHHHHHHHHHh
Confidence            888888885443 332    234578999995 7889999999999999998765

>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.93  E-value=1.4e-24  Score=219.52  Aligned_cols=324  Identities=12%  Similarity=0.051  Sum_probs=224.4

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ..+.+.+...+......|...++..++++++.+|+.+.+|.+...     ...++|+|||+|+..++.+...        
T Consensus        57 ~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~-----~~v~~~~g~t~al~~~~~~l~~--------  123 (389)
T 1o4s_A           57 EPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISP-----DQVVVTNGAKQALFNAFMALLD--------  123 (389)
T ss_dssp             HHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCG-----GGEEEESHHHHHHHHHHHHHCC--------
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCH-----HHEEEecCHHHHHHHHHHHhCC--------
Confidence            445555665554433456555678899999999999988874111     1469999999999988877632        


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD  263 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id  263 (499)
                         ++..|+++..+|.++..+++..|.   +++.+|.+++++|.+|+++|+++++++      +.+|+++.++|++|.+-
T Consensus       124 ---~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~  191 (389)
T 1o4s_A          124 ---PGDEVIVFSPVWVSYIPQIILAGG---TVNVVETFMSKNFQPSLEEVEGLLVGK------TKAVLINSPNNPTGVVY  191 (389)
T ss_dssp             ---TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECCGGGTTCCCHHHHHHTCCTT------EEEEEEESSCTTTCCCC
T ss_pred             ---CCCEEEEcCCCchhHHHHHHHcCC---EEEEEecCCccCCCCCHHHHHHhcccC------ceEEEEcCCCCCCCCCC
Confidence               456788899999999999999999   999999875334789999999988643      34677889999999996


Q ss_pred             C---hhHHHHHHHHhCCEEEeeccccchhccCc--cchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhh
Q 010842          264 N---VEPLAEVANEYGIWVHVDAAYAGSACICP--EFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKAL  337 (499)
Q Consensus       264 ~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~--~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~  337 (499)
                      |   +++|+++|+++|+++++|++|+.+....+  .... +.+....|.++.++||+++.| ..+|+++++++  +.+.+
T Consensus       192 ~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~l~~~~~--~~~~l  268 (389)
T 1o4s_A          192 RREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILD-VSEGFDRIVYINGFSKSHSMTGWRVGYLISSEK--VATAV  268 (389)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHH-HCSSSTTEEEEEESTTTTTCGGGCCEEEECCHH--HHHHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhh-cCCCCCcEEEEeechhhcCCcccceEEEEeCHH--HHHHH
Confidence            6   99999999999999999999987653211  1111 222235799999999999744 34899888643  22222


Q ss_pred             cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCc
Q 010842          338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHF  417 (499)
Q Consensus       338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~  417 (499)
                      .....+..                    .....+..+++...+.. ++++..++..++++++.+.|++. ++++..+...
T Consensus       269 ~~~~~~~~--------------------~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~  326 (389)
T 1o4s_A          269 SKIQSHTT--------------------SCINTVAQYAALKALEV-DNSYMVQTFKERKNFVVERLKKM-GVKFVEPEGA  326 (389)
T ss_dssp             HHHHHHHT--------------------CSCCHHHHHHHHHHTTC-CCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSBS
T ss_pred             HHHhhhcc--------------------cCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhc-CCeeecCCcc
Confidence            11100000                    00123445555555543 37778888889999999999987 7776543333


Q ss_pred             eEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      ..+++.+. ..          ..++.++|. +.|+.+..+..+....++|++++   +++++|+++++.|.++.+
T Consensus       327 ~~~~~~~~-~~----------~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~---~~~~~l~~~l~~l~~~l~  387 (389)
T 1o4s_A          327 FYLFFKVR-GD----------DVKFCERLLEEKKVALVPGSAFLKPGFVRLSFA---TSIERLTEALDRIEDFLN  387 (389)
T ss_dssp             SEEEEECS-SC----------HHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC---SCHHHHHHHHHHHHHHHT
T ss_pred             eEEEEeCC-CC----------HHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEe---CCHHHHHHHHHHHHHHHh
Confidence            33444553 21          355677776 67865444433332348999996   388999999999987653

>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3

Probab=99.93  E-value=4.9e-24  Score=217.27  Aligned_cols=311  Identities=17%  Similarity=0.156  Sum_probs=206.8

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCC-eEEEcCCCCchhHHHHHH-
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHK-LVVYGSDQTHSTFAKVCK-  206 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~-~~i~~s~~~H~s~~ka~~-  206 (499)
                      ....++.+++++++|.+.+       ..++|+|||+++..++.+++.....     +.++ .+|+++...|.++..++. 
T Consensus        71 ~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~al~~al~~~~~~~~~-----~~~gd~vii~~~~~~~~~~~~~~~  138 (416)
T 1qz9_A           71 DLSERLGNRLATLIGARDG-------EVVVTDTTSINLFKVLSAALRVQAT-----RSPERRVIVTETSNFPTDLYIAEG  138 (416)
T ss_dssp             GHHHHHHHHHHTTTTCCTT-------SEEECSCHHHHHHHHHHHHHHHHHH-----HSTTCCEEEEETTSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCcc-------cEEEeCChhHHHHHHHHhhcccccc-----cCCCCcEEEEcCCCCCchHHHHHH
Confidence            4556677889999998643       3588999999887787776521100     0033 357777889998766543 


Q ss_pred             ---Hh--CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842          207 ---LA--GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV  281 (499)
Q Consensus       207 ---~~--G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv  281 (499)
                         ..  |+   +++.||+         +++|+++|++      .+.+|++++++|++|.+.|+++|+++|++||+|+|+
T Consensus       139 ~~~~~~~g~---~~~~v~~---------~~~l~~~i~~------~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~  200 (416)
T 1qz9_A          139 LADMLQQGY---TLRLVDS---------PEELPQAIDQ------DTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIW  200 (416)
T ss_dssp             HHHHHCSSC---EEEEESS---------GGGHHHHCST------TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEE
T ss_pred             HHHHhcCCc---eEEEeCc---------HHHHHHHhCC------CceEEEEeccccCcccccCHHHHHHHHHHcCCEEEE
Confidence               34  88   8888875         5678887753      245899999999999999999999999999999999


Q ss_pred             eccccchhccCccchhhhcCCCCCceeEecccccccCCCcc-eEEEEeCchhHHHhhcC-CccCCCCCC-CCCCCcccCC
Q 010842          282 DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC-CCLWVKQPGLLVKALST-DPEYLKNKP-SESNSVVDFK  358 (499)
Q Consensus       282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~-g~l~~r~~~~l~~~~~~-~~~yl~~~~-~~~~~~~~~~  358 (499)
                      |++|+.+....+ ...    . .+|++++++||+++.+.++ |+++++++. . +.+.. ...|..... .+......+.
T Consensus       201 D~a~~~g~~~~~-~~~----~-~~d~~~~s~~K~l~~g~~~~g~l~~~~~~-~-~~l~~~~~g~~g~~~~~~~~~~~~~~  272 (416)
T 1qz9_A          201 DLAHSAGAVPVD-LHQ----A-GADYAIGCTYKYLNGGPGSQAFVWVSPQL-C-DLVPQPLSGWFGHSRQFAMEPRYEPS  272 (416)
T ss_dssp             ECTTTTTTSCCC-HHH----H-TCSEEEECSSSTTCCCTTCCCEEEECTTT-T-TTSCCSCCCGGGBCTTSCCCSSCCBC
T ss_pred             EccccccCcCCC-hhh----c-CCCEEEecCcccCCCCCCCeEEEEECHHH-H-hccCCCccccCccccccCCCCccCCC
Confidence            999975433221 111    1 3899999999998777787 999987652 1 11111 111110000 0000000000


Q ss_pred             --CcccCCCCC-C-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-C--CeEEEcCC----CceEEEEEecCC
Q 010842          359 --DWQVGTGRR-F-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD-P--RFEIVVPR----HFALVCFRLNPY  427 (499)
Q Consensus       359 --~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~--~~~~~~~~----~~~~v~f~~~~~  427 (499)
                        ......+.. . ....+..+++.+..++++++.++..++++++.+.|++. |  +++++.+.    ..++++|++.. 
T Consensus       273 ~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-  351 (416)
T 1qz9_A          273 NGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE-  351 (416)
T ss_dssp             SSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT-
T ss_pred             cchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCC-
Confidence              001111111 1 12344556666655688899999999999999999885 6  88887553    35677776632 


Q ss_pred             CCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          428 PHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       428 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                                 ..++.+.|.++|+. +.   ..+..++|+++.++.+|++|+++++++|+++.++.
T Consensus       352 -----------~~~l~~~l~~~gi~-~~---~~~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~  402 (416)
T 1qz9_A          352 -----------GYAVIQALIDRGVI-GD---YREPRIMRFGFTPLYTTFTEVWDAVQILGEILDRK  402 (416)
T ss_dssp             -----------HHHHHHHHHTTTEE-CE---EETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             -----------HHHHHHHHHhCCcE-ec---cCCCCeEEEeCcccCCCHHHHHHHHHHHHHHHhcc
Confidence                       35677888888843 22   22446799999534789999999999999988764

>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}

Probab=99.93  E-value=2.7e-24  Score=219.87  Aligned_cols=332  Identities=13%  Similarity=0.083  Sum_probs=224.2

Q ss_pred             HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842          105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE  184 (499)
Q Consensus       105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~  184 (499)
                      .+.+.+...+......|...  ..++++++.+|+++.+|++...     ...++|+||++|+..++.++..         
T Consensus        78 ~v~~a~~~~~~~~~~~y~~~--~~~l~~~l~~~l~~~~g~~~~~-----~~v~~~~g~~ea~~~a~~~~~~---------  141 (421)
T 3l8a_A           78 EIKEAIINYGREHIFGYNYF--NDDLYQAVIDWERKEHDYAVVK-----EDILFIDGVVPAISIALQAFSE---------  141 (421)
T ss_dssp             HHHHHHHHHHHHCCSSCBCC--CHHHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHSC---------
T ss_pred             HHHHHHHHHHhcCCcCCCCC--CHHHHHHHHHHHHHHhCCCCCH-----HHEEEcCCHHHHHHHHHHHhcC---------
Confidence            34455555554333344433  3789999999999999954221     1469999999999999887642         


Q ss_pred             ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC-CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-
Q 010842          185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS-VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-  262 (499)
Q Consensus       185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~-~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-  262 (499)
                        ++..|+++..+|.++..++...|.   +++.+|++ .+++|.+|+++|++++++.     .+.+|+++.++|++|.+ 
T Consensus       142 --~gd~Vi~~~~~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~le~~i~~~-----~~~~vil~~p~nptG~~~  211 (421)
T 3l8a_A          142 --KGDAVLINSPVYYPFARTIRLNDH---RLVENSLQIINGRFEIDFEQLEKDIIDN-----NVKIYLLCSPHNPGGRVW  211 (421)
T ss_dssp             --TEEEEEEEESCCHHHHHHHHHTTE---EEEEEECEEETTEEECCHHHHHHHHHHT-----TEEEEEEESSBTTTTBCC
T ss_pred             --CCCEEEECCCCcHHHHHHHHHCCC---EEEeccccccCCCeeeCHHHHHHHhhcc-----CCeEEEECCCCCCCCCcC
Confidence              456788899999999999999999   99999987 4556889999999999741     23478889999999999 


Q ss_pred             --CChhHHHHHHHHhCCEEEeeccccchhccCccchhhh---cCCCCCceeEeccccccc-CCCcceEEEEeCchhHHHh
Q 010842          263 --DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL---NGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLLVKA  336 (499)
Q Consensus       263 --d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~---~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l~~~  336 (499)
                        +++++|+++|++||+++++|++|+++...........   ......+.++.+++|+++ ....+|++++++++.. +.
T Consensus       212 ~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~-~~  290 (421)
T 3l8a_A          212 DNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESLR-RK  290 (421)
T ss_dssp             CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHHH-HH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHHH-HH
Confidence              7899999999999999999999987643221111111   111234577889999997 4467899988865433 22


Q ss_pred             hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC
Q 010842          337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH  416 (499)
Q Consensus       337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~  416 (499)
                      +.......                +......+....+..++.. +.+.+++..++..++++++.+.|++.|+++++.+..
T Consensus       291 ~~~~~~~~----------------~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~~~~~~~  353 (421)
T 3l8a_A          291 FQYRQLAN----------------NQHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIKVMEPEG  353 (421)
T ss_dssp             HHHHHHHT----------------TCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCEEECCSB
T ss_pred             HHHHHHhc----------------ccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCceEeCCCe
Confidence            21110000                0001111112222333332 566788888999999999999998888998875444


Q ss_pred             ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeE--CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIV--GGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      ...+++.+....        ....++.+.|.++ |..+..+..+  .+..++|++++   +++++|++++++|+++.+
T Consensus       354 ~~~~~v~~~~~~--------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~---~~~~~i~~~l~~l~~~l~  420 (421)
T 3l8a_A          354 TYLVWLDFSAYA--------IAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVA---TPKNTVQEALSRIISVFG  420 (421)
T ss_dssp             SSEEEEECGGGT--------CCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHHHHC-
T ss_pred             eEEEEEeccccC--------CCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHHHHh
Confidence            333435554311        0024567777644 7544333333  23478999985   689999999999988753

>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}

Probab=99.93  E-value=1.2e-24  Score=221.21  Aligned_cols=318  Identities=12%  Similarity=0.065  Sum_probs=218.3

Q ss_pred             ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842          120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS  199 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~  199 (499)
                      .|...++..++.+++.+++++.+|.+.+.    ....++|+|||+|+..++.+...           ++..|+++..+|.
T Consensus        73 ~y~~~~g~~~l~~~l~~~l~~~~g~~~~~----~~~i~~~~g~~~a~~~~~~~l~~-----------~gd~vl~~~~~~~  137 (407)
T 3nra_A           73 AYTEYRGDLGIRDLLAPRLAAFTGAPVDA----RDGLIITPGTQGALFLAVAATVA-----------RGDKVAIVQPDYF  137 (407)
T ss_dssp             HSCCTTCCHHHHHHHHHHHHHHHTSCCCT----TTSEEEESHHHHHHHHHHHTTCC-----------TTCEEEEEESCCT
T ss_pred             CcCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCcHHHHHHHHHHhCC-----------CCCEEEEcCCccc
Confidence            45556677899999999999999984210    01368999999999888776532           4667888999999


Q ss_pred             hHHHHHHHhCCCCCCeEEeeCCC----CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHH
Q 010842          200 TFAKVCKLAGVSPANIRALPTSV----DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVA  272 (499)
Q Consensus       200 s~~ka~~~~G~g~~~v~~v~~~~----~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia  272 (499)
                      ++..+++..|.   +++.+|++.    +.++.+|+++|+++++++      +.+|+++.++|++|.+-|   +++|+++|
T Consensus       138 ~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~~~~~l~~i~~~~  208 (407)
T 3nra_A          138 ANRKLVEFFEG---EMVPVQLDYVSADETRAGLDLTGLEEAFKAG------ARVFLFSNPNNPAGVVYSAEEIGQIAALA  208 (407)
T ss_dssp             HHHHHHHHTTC---EEEEEEBCCCSSCCSSCCBCHHHHHHHHHTT------CCEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred             chHHHHHHcCC---EEEEeecccccccCcCCCcCHHHHHHHHhhC------CcEEEEcCCCCCCCcccCHHHHHHHHHHH
Confidence            99999999999   999999842    134789999999999763      336788999999999988   99999999


Q ss_pred             HHhCCEEEeeccccchhccCccchhhhc---CCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCC
Q 010842          273 NEYGIWVHVDAAYAGSACICPEFRHYLN---GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKP  348 (499)
Q Consensus       273 ~~~~~~lhvD~A~g~~~~~~~~~~~~~~---g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~  348 (499)
                      ++||+++++|++|+++.+..........   .....+.++.+++|+++.| ..+|+++.+. ... +.+.....+...  
T Consensus       209 ~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-~~~-~~l~~~~~~~~~--  284 (407)
T 3nra_A          209 ARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSR-AII-ARMEKLQAIVSL--  284 (407)
T ss_dssp             HHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECH-HHH-HHHHHHHHHHTS--
T ss_pred             HHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCH-HHH-HHHHHHHhhhcc--
Confidence            9999999999999876532211111110   1123557888999999844 5678887643 222 222111000000  


Q ss_pred             CCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecC
Q 010842          349 SESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP  426 (499)
Q Consensus       349 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~  426 (499)
                                        ....+..+++...+  +.+.+++..++..++++++.+.|+++|++++..+.....+.+.+..
T Consensus       285 ------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~  346 (407)
T 3nra_A          285 ------------------RAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPK  346 (407)
T ss_dssp             ------------------SSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCC
T ss_pred             ------------------CCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCC
Confidence                              00122333333333  2356788888899999999999999989887644443445444433


Q ss_pred             CCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          427 YPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       427 ~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      ..        ....++.+.|.+ .|+.+..+..+.  +..++|++++   +++++|++++++|.++.+++.
T Consensus       347 ~~--------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~---~~~~~i~~~~~~l~~~~~~~~  406 (407)
T 3nra_A          347 LA--------VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFS---QDHEAAVAAARRIVTLVERYR  406 (407)
T ss_dssp             BS--------SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECC---SCHHHHHHHHHHHHHHHHHHB
T ss_pred             CC--------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeC---CCHHHHHHHHHHHHHHHHHhh
Confidence            11        013456677754 475444333332  4578999996   389999999999999887653

>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*

Probab=99.93  E-value=1.7e-24  Score=217.40  Aligned_cols=332  Identities=11%  Similarity=0.054  Sum_probs=212.7

Q ss_pred             HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842          105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE  184 (499)
Q Consensus       105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~  184 (499)
                      .+.+.+...+...  .+..++...++++    .+++++|.+ .        .++|+|||+|+..++.+++.. ..     
T Consensus        14 ~v~~a~~~~~~~~--~~~~~~~~~~l~~----~la~~~~~~-~--------v~~~~ggt~al~~~~~~~~~~-~~-----   72 (375)
T 2fnu_A           14 EDKKAVLEVLNSK--QLTQGKRSLLFEE----ALCEFLGVK-H--------ALVFNSATSALLTLYRNFSEF-SA-----   72 (375)
T ss_dssp             HHHHHHHHHHTSS--CCSSSHHHHHHHH----HHHHHHTCS-E--------EEEESCHHHHHHHHHHHSSCC-CT-----
T ss_pred             HHHHHHHHHHHcC--cccCChHHHHHHH----HHHHHhCCC-e--------EEEeCCHHHHHHHHHHHhccc-CC-----
Confidence            3445555555432  1223454444554    488888876 2        499999999999888876310 00     


Q ss_pred             ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842          185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN  264 (499)
Q Consensus       185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~  264 (499)
                        ++..|+++..+|.++..++...|+   +++.+|+++++  .+|+++|+++++++      +.+|+.+++   +|.+.|
T Consensus        73 --~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~--~~d~~~l~~~i~~~------~~~v~~~~~---tG~~~~  136 (375)
T 2fnu_A           73 --DRNEIITTPISFVATANMLLESGY---TPVFAGIKNDG--NIDELALEKLINER------TKAIVSVDY---AGKSVE  136 (375)
T ss_dssp             --TSCEEEECSSSCTHHHHHHHHTTC---EEEECCBCTTS--SBCGGGSGGGCCTT------EEEEEEECG---GGCCCC
T ss_pred             --CCCEEEECCCccHhHHHHHHHCCC---EEEEeccCCCC--CCCHHHHHhhcCcC------ceEEEEeCC---cCCccC
Confidence              456899999999999999999999   99999998654  89999999988643      235566554   899999


Q ss_pred             hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeC-chhHHHhhcCCccC
Q 010842          265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQ-PGLLVKALSTDPEY  343 (499)
Q Consensus       265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~-~~~l~~~~~~~~~y  343 (499)
                      +++|.++|++||+++|+|++|+.+......   .+.....+++.++++||+++ | |+|++++++ ++.. +.+..   +
T Consensus       137 l~~i~~l~~~~~~~li~D~a~~~~~~~~~~---~~~~~~~i~~~s~s~~K~~~-~-g~g~~~~~~~~~~~-~~~~~---~  207 (375)
T 2fnu_A          137 VESVQKLCKKHSLSFLSDSSHALGSEYQNK---KVGGFALASVFSFHAIKPIT-T-AEGGAVVTNDSELH-EKMKL---F  207 (375)
T ss_dssp             HHHHHHHHHHHTCEEEEECTTCTTCEETTE---ETTSSSSEEEEECCTTSSSC-C-SSCEEEEESCHHHH-HHHHH---H
T ss_pred             HHHHHHHHHHcCCEEEEECccccCCeECCe---eccccCCeEEEeCCCCCCcc-c-cCceEEEeCCHHHH-HHHHH---H
Confidence            999999999999999999999865432111   11122236677888899995 5 788888853 4332 21111   0


Q ss_pred             CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----Cce
Q 010842          344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----HFA  418 (499)
Q Consensus       344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----~~~  418 (499)
                      ......+. ....+.  ....+.++....+.+++.....++++++.++..++++++.+.|+++|++++..++     ...
T Consensus       208 ~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~  284 (375)
T 2fnu_A          208 RSHGMLKK-DFFEGE--VKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNH  284 (375)
T ss_dssp             TBTTEEES-SSSCEE--ESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCS
T ss_pred             HhcCCccc-cccccc--cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceE
Confidence            00000000 000000  0011212222233333333345778889999999999999999999999886541     223


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee-e------EC--------------CEEEEEEeccCCCCcHH
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT-I------VG--------------GLYMLRFAVGASLTDER  477 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~------~~--------------g~~~lRi~~~~~~~t~~  477 (499)
                      .+.+.+....      .. ...++.+.|.++|+.+.... .      +.              +..++|+++. +.+|++
T Consensus       285 ~~~~~~~~~~------~~-~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~-~~~t~~  356 (375)
T 2fnu_A          285 LYPILMHQKF------FT-CKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCH-ANLNLE  356 (375)
T ss_dssp             CEEEEECGGG------GG-GHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCC-TTCCHH
T ss_pred             EEEEEeCccc------cc-hHHHHHHHHHHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCC-CCCCHH
Confidence            3455554310      00 14567777877785432110 0      00              1257999984 889999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010842          478 HVVAAWELIMEGADRL  493 (499)
Q Consensus       478 di~~l~~~l~~~~~~l  493 (499)
                      |+++++++|+++.+++
T Consensus       357 ~i~~~~~~l~~~~~~~  372 (375)
T 2fnu_A          357 SVQNIAHSVLKTFESF  372 (375)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999988765

>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*

Probab=99.92  E-value=4.1e-24  Score=218.24  Aligned_cols=323  Identities=14%  Similarity=0.091  Sum_probs=208.9

Q ss_pred             hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH
Q 010842          126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC  205 (499)
Q Consensus       126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~  205 (499)
                      +...+..++.+++++++|.+..         +++++||+|+..++.+.+-.          ++..|+++..+|.++..++
T Consensus        39 g~~~l~~~l~~~la~~~g~~~~---------i~~~~gt~al~~~~~~~~~~----------~gd~Vl~~~~~~~~~~~~~   99 (418)
T 2c81_A           39 GEESMERKFAKAFADFNGVPYC---------VPTTSGSTALMLALEALGIG----------EGDEVIVPSLTWIATATAV   99 (418)
T ss_dssp             SSCCHHHHHHHHHHHHHTCSEE---------EEESCHHHHHHHHHHHTTCC----------TTCEEEEESSSCTHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHhCCCcE---------EEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCccHhHHHHH
Confidence            3344556666779999998743         88899999999888876211          4567899999999999999


Q ss_pred             HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842          206 KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY  285 (499)
Q Consensus       206 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~  285 (499)
                      +..|+   +++.+|++++ ++.+|+++|+++++++      +.+|++   ++++|.+.|+++|.++|+++|+++|+|++|
T Consensus       100 ~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~~---~~~~G~~~~~~~i~~~~~~~~~~li~D~a~  166 (418)
T 2c81_A          100 LNVNA---LPVFVDVEAD-TYCIDPQLIKSAITDK------TKAIIP---VHLFGSMANMDEINEIAQEHNLFVIEDCAQ  166 (418)
T ss_dssp             HHTTC---EEEEECBCTT-TCSBCHHHHGGGCCTT------EEEECC---BCCTTCCCCHHHHHHHHHHTTCEEEEECTT
T ss_pred             HHcCC---EEEEEecCCC-CCCcCHHHHHHhhCCC------CeEEEE---eCCcCCcccHHHHHHHHHHCCCEEEEECcc
Confidence            99999   9999998753 4799999999988643      234544   357999999999999999999999999999


Q ss_pred             cchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCC-CCCCcccCCC-----
Q 010842          286 AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPS-ESNSVVDFKD-----  359 (499)
Q Consensus       286 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~-~~~~~~~~~~-----  359 (499)
                      +.+......  . ...+..+++.++++||+++.+ .+|+++.+++.......... .+...... .......+.+     
T Consensus       167 ~~~~~~~~~--~-~~~~~~~~~~s~s~~K~~~~g-~~g~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~  241 (418)
T 2c81_A          167 SHGSVWNNQ--R-AGTIGDIGAFSCQQGKVLTAG-EGGIIVTKNPRLFELIQQLR-ADSRVYCDDSSELMHGDMQLVKKG  241 (418)
T ss_dssp             CTTCEETTE--E-TTSSSSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHH-BTTEEECSCGGGCCTTCBSEEECC
T ss_pred             cccCccCCE--e-cccccceEEEeccCCcccCCC-CeEEEEECCHHHHHHHHHHH-HhCccccccccccccchhhccccc
Confidence            877532111  1 111223667777789999874 67777775554322111100 00000000 0000000110     


Q ss_pred             cccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCc------eEEEEEecCCCCCCcc
Q 010842          360 WQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHF------ALVCFRLNPYPHSGSA  433 (499)
Q Consensus       360 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~------~~v~f~~~~~~~~~~~  433 (499)
                      ..+..+.+...+..+..+.  ..++++++.++..++++++.+.|+++|++++..++..      .++++.+.+.. ..  
T Consensus       242 ~~~g~~~~~~~~~aa~~~~--~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--  316 (418)
T 2c81_A          242 DIQGSNYCLSEFQSAILLD--QLQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQTYYGYVFRFDPVK-FG--  316 (418)
T ss_dssp             SSCCCBCCCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEECCCSEEEEEECGGG-TT--
T ss_pred             cccCcCCCcCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCcccccEEEEEEEcccc-cc--
Confidence            0011222233443333332  3366788889999999999999999999998744332      35556664200 00  


Q ss_pred             hhHHHHHHHHHHHHhc-CCE---EEEee-eE------C--------------------C---------EEEEEEeccCCC
Q 010842          434 DTEMLNRKLLDWVNST-GRV---YLTHT-IV------G--------------------G---------LYMLRFAVGASL  473 (499)
Q Consensus       434 ~~~~~~~~l~~~l~~~-g~~---~~~~~-~~------~--------------------g---------~~~lRi~~~~~~  473 (499)
                        .....++.+.|.++ |+.   +..+. ..      .                    +         ...+|+++ ++.
T Consensus       317 --~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~-~~~  393 (418)
T 2c81_A          317 --GLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSERASGQSIVIHH-AIL  393 (418)
T ss_dssp             --TCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHHHHHHEEEEEG-GGG
T ss_pred             --ccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHHHHhCEEEecC-Ccc
Confidence              00135677777777 865   32211 00      0                    1         25799999 588


Q ss_pred             C-cHHHHHHHHHHHHHHHHHH
Q 010842          474 T-DERHVVAAWELIMEGADRL  493 (499)
Q Consensus       474 ~-t~~di~~l~~~l~~~~~~l  493 (499)
                      + |++||++++++|+++.+++
T Consensus       394 ~gt~edi~~~~~~l~~~~~~~  414 (418)
T 2c81_A          394 LAEPSHLSLLVDAVAELARKF  414 (418)
T ss_dssp             GSCHHHHHHHHHHHHHHHHTT
T ss_pred             CCCHHHHHHHHHHHHHHHHhh
Confidence            9 9999999999999987654

>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*

Probab=99.92  E-value=5.6e-24  Score=217.91  Aligned_cols=340  Identities=10%  Similarity=0.027  Sum_probs=225.2

Q ss_pred             hHHHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcC--CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHH
Q 010842          102 TAGFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLK--LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRAL  178 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g--~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~  178 (499)
                      ++..+.+.+...+... ...|...++..++++++.+++.+. |  .+.+       ..++|+|||+|+..++.+..+   
T Consensus        72 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~~~-------~v~~t~g~t~al~~~~~~l~~---  140 (427)
T 3dyd_A           72 TDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIASYYHCP-EAPLEAK-------DVILTSGCSQAIDLCLAVLAN---  140 (427)
T ss_dssp             CCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHHHHHHCBT-TBCCCGG-------GEEEESSHHHHHHHHHHHHCC---
T ss_pred             CCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHHHHHHhhc-CCCCChH-------HEEEecCcHHHHHHHHHHhcC---
Confidence            3344555555544332 235655667778888854444332 2  2222       469999999999988887642   


Q ss_pred             hHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc
Q 010842          179 DAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS  258 (499)
Q Consensus       179 ~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~  258 (499)
                              ++..|+++.++|..+...++..|+   +++.+|.++++++.+|+++|+++++++      +.+|+++.++|+
T Consensus       141 --------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~np  203 (427)
T 3dyd_A          141 --------PGQNILVPRPGFSLYKTLAESMGI---EVKLYNLLPEKSWEIDLKQLEYLIDEK------TACLIVNNPSNP  203 (427)
T ss_dssp             --------TTCEEEEEESCCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHSSCCTT------EEEEEEESSCTT
T ss_pred             --------CCCEEEEcCCCchhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHhccC------CCEEEEECCCCC
Confidence                    466788899999999999999999   999999876556899999999988653      347888899999


Q ss_pred             ccccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCc-eeEecccccccCC-CcceEEEEeCc---
Q 010842          259 TTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD-SFSFSPHKWLLSY-LDCCCLWVKQP---  330 (499)
Q Consensus       259 ~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aD-si~~~~hK~l~~p-~~~g~l~~r~~---  330 (499)
                      ||.+-|   +++|+++|+++|+++++|++|+++............--...+ .++.+.+|.++.| ..+|+++++++   
T Consensus       204 tG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~  283 (427)
T 3dyd_A          204 CGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDI  283 (427)
T ss_dssp             TCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTS
T ss_pred             CCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchh
Confidence            999999   999999999999999999999876542211111111001123 4456999986544 55899998864   


Q ss_pred             --hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010842          331 --GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR  408 (499)
Q Consensus       331 --~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~  408 (499)
                        ..+...+.........                  ........+..++.....+.++++.++..++++++.+.|+++|+
T Consensus       284 ~~~~i~~~l~~~~~~~~~------------------~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g  345 (427)
T 3dyd_A          284 FGNEIRDGLVKLSQRILG------------------PCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAIPG  345 (427)
T ss_dssp             SHHHHHHHHHHHHHHHCC------------------SCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred             hHHHHHHHHHHHHhccCC------------------CCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence              1122221110000000                  00011222333344334677889999999999999999999999


Q ss_pred             eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          409 FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       409 ~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                      ++++.+.....+.+.+........    ....++.++|. +.|+.+..+..+....++|++++   +++++|++++++|.
T Consensus       346 ~~~~~p~~g~~~~~~l~~~~~~~~----~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~---~~~e~i~~~l~~l~  418 (427)
T 3dyd_A          346 LRPVRPSGAMYLMVGIEMEHFPEF----ENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVIT---VPEVMMLEACSRIQ  418 (427)
T ss_dssp             EEEECCSBTTEEEEEECGGGCTTC----SSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESC---SCHHHHHHHHHHHH
T ss_pred             ceecCCCeeEEEEEecCHhhcCCC----CCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEEC---CCHHHHHHHHHHHH
Confidence            987755555555556542100000    01345666664 56765555545555678999985   68999999999999


Q ss_pred             HHHHHHh
Q 010842          488 EGADRLF  494 (499)
Q Consensus       488 ~~~~~l~  494 (499)
                      ++.+++.
T Consensus       419 ~~l~~~~  425 (427)
T 3dyd_A          419 EFCEQHY  425 (427)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhh
Confidence            9987764

>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.92  E-value=1.4e-23  Score=212.20  Aligned_cols=332  Identities=11%  Similarity=0.001  Sum_probs=221.9

Q ss_pred             HHHHHHHHHHHcccCCcccccChhhHH-HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPASTE-LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~-lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      +..+.+.+...++.....|...  ..+ +++++.+|+.+.+|.+...     ...++|+|||+|+..++.+...      
T Consensus        43 ~~~v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~-----~~v~~t~g~~~al~~~~~~l~~------  109 (390)
T 1d2f_A           43 APCIIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAIDS-----QTVVYGPSVIYMVSELIRQWSE------  109 (390)
T ss_dssp             CHHHHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCCG-----GGEEEESCHHHHHHHHHHHSSC------
T ss_pred             CHHHHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCCH-----HHEEEcCCHHHHHHHHHHHhcC------
Confidence            3445566666665433445433  567 9999999999988853221     1469999999999888876532      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCC-CCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVD-ANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT  260 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G  260 (499)
                           ++..|+++..+|.++..+++..|.   +++.+|++.+ ++|.+|+++|++++++.     .+.+|+++.++|++|
T Consensus       110 -----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~l~~~-----~~~~v~l~~p~nptG  176 (390)
T 1d2f_A          110 -----TGEGVVIHTPAYDAFYKAIEGNQR---TVMPVALEKQADGWFCDMGKLEAVLAKP-----ECKIMLLCSPQNPTG  176 (390)
T ss_dssp             -----TTCEEEEEESCCHHHHHHHHHTTC---EEEEEECEECSSSEECCHHHHHHHHTST-----TEEEEEEESSCTTTC
T ss_pred             -----CCCEEEEcCCCcHHHHHHHHHCCC---EEEEeecccCCCccccCHHHHHHHhccC-----CCeEEEEeCCCCCCC
Confidence                 456788899999999999999999   9999998754 25779999999998641     245677789999999


Q ss_pred             ccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCC-CC-ceeEecccccccCC-CcceEEEEeCchhHH
Q 010842          261 AVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE-RV-DSFSFSPHKWLLSY-LDCCCLWVKQPGLLV  334 (499)
Q Consensus       261 ~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-~a-Dsi~~~~hK~l~~p-~~~g~l~~r~~~~l~  334 (499)
                      .+-|   +++|+++|++||+++++|++|+.+.......... ..+. .. |. ..+.+|+++.| ..+|+++++++....
T Consensus       177 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~-~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~~~~~  254 (390)
T 1d2f_A          177 KVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPW-SNVARGDWAL-LTSGSKSFNIPALTGAYGIIENSSSRD  254 (390)
T ss_dssp             CCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCG-GGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSHHHHH
T ss_pred             cCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCH-HHcchhhHhh-ccCccHhhcccChhheEEEECCHHHHH
Confidence            9966   8999999999999999999998764321111111 1121 12 56 88999999744 457999887654332


Q ss_pred             HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEE
Q 010842          335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEI  411 (499)
Q Consensus       335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~  411 (499)
                       .+.....+  ..             +  .+ ....+..+++...+  +.+.+++..++..++++++.+.|++ +|++++
T Consensus       255 -~~~~~~~~--~~-------------~--~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~  315 (390)
T 1d2f_A          255 -AYLSALKG--RD-------------G--LS-SPSVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNW  315 (390)
T ss_dssp             -HHHHHHHT--TS-------------C--CC-SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCC
T ss_pred             -HHHHHHhh--hc-------------c--cC-CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCEE
Confidence             22110000  00             0  00 01233334333333  3566788888889999999999998 788876


Q ss_pred             EcCCCceEE-EEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          412 VVPRHFALV-CFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       412 ~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                      . ++..+.+ ++.+...+        ....++.+.|. +.|+.+..+..+.  +..++|++++.   ++++|+++++.|.
T Consensus       316 ~-~~~~~~~~~~~~~~~~--------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~---~~~~l~~~l~~l~  383 (390)
T 1d2f_A          316 Q-IPQSTYLAWLDLRPLN--------IDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGC---PRSKLEKGVAGLI  383 (390)
T ss_dssp             C-CCSBCSEEEEECGGGC--------CCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCS---CHHHHHHHHHHHH
T ss_pred             e-cCCccEEEEEEccccC--------CCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecC---CHHHHHHHHHHHH
Confidence            5 3444444 45654310        01356778887 5675544433332  34679999963   5789999999999


Q ss_pred             HHHHHH
Q 010842          488 EGADRL  493 (499)
Q Consensus       488 ~~~~~l  493 (499)
                      ++.+++
T Consensus       384 ~~l~~~  389 (390)
T 1d2f_A          384 NAIRAV  389 (390)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            887654

>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4

Probab=99.92  E-value=3.1e-23  Score=210.36  Aligned_cols=303  Identities=13%  Similarity=0.073  Sum_probs=207.8

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      ....++.+.+++++|.+..         +++++||+|+..++.+...           ++..|+++...|.++..+++..
T Consensus        90 ~~~~~l~~~la~~~g~~~~---------i~~~sGs~a~~~~~~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~  149 (401)
T 1fc4_A           90 DSHKELEQKLAAFLGMEDA---------ILYSSCFDANGGLFETLLG-----------AEDAIISDALNHASIIDGVRLC  149 (401)
T ss_dssp             HHHHHHHHHHHHHHTCSEE---------EEESCHHHHHHTTHHHHCC-----------TTCEEEEETTCCHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhCCCcE---------EEeCChHHHHHHHHHHHcC-----------CCCEEEEcchhHHHHHHHHHHc
Confidence            3445555668888898732         7778889999887776532           4567888999999999999988


Q ss_pred             CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecccc-c
Q 010842          209 GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA-G  287 (499)
Q Consensus       209 G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g-~  287 (499)
                      |.   .++.+|.       +|+++|++++++....+..+.+|+++.++|++|.+.|+++|.++|++||+++++|++|+ +
T Consensus       150 g~---~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g  219 (401)
T 1fc4_A          150 KA---KRYRYAN-------NDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVG  219 (401)
T ss_dssp             CS---EEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTT
T ss_pred             CC---ceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECccccc
Confidence            98   8888762       48999999998754433346688889999999999999999999999999999999996 4


Q ss_pred             hhccCccchhhhcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCC
Q 010842          288 SACICPEFRHYLNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR  366 (499)
Q Consensus       288 ~~~~~~~~~~~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr  366 (499)
                      +............++ ...|+++.++||+++.+.+ |+++.++ +...........|...                   .
T Consensus       220 ~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g-G~~~~~~-~~~~~l~~~~~~~~~~-------------------~  278 (401)
T 1fc4_A          220 FVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG-GYTAARK-EVVEWLRQRSRPYLFS-------------------N  278 (401)
T ss_dssp             TSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC-EEEEECH-HHHHHHHHHCHHHHHS-------------------C
T ss_pred             ccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC-EEEEcCH-HHHHHHHHhCcCceeC-------------------C
Confidence            421111110111222 2479999999999965655 8888753 3332211111111100                   0


Q ss_pred             CCCcHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHH
Q 010842          367 RFKSLRLWMVLRSYGV-LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDW  445 (499)
Q Consensus       367 ~~~al~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~  445 (499)
                      ....+.+++++..+.. +..++..++..++++++.+.|++. ++++. ++..+++++.+..         .....++.+.
T Consensus       279 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~---------~~~~~~l~~~  347 (401)
T 1fc4_A          279 SLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA-GFTLA-GADHAIIPVMLGD---------AVVAQKFARE  347 (401)
T ss_dssp             CCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCCBC-CSSSSEEEEEEEC---------HHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCCCEEEEEcCC---------hHHHHHHHHH
Confidence            1123333443333321 114677888889999999999987 77766 5566777777743         1235677888


Q ss_pred             HHhcCCEEEEeeeE---CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          446 VNSTGRVYLTHTIV---GGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       446 l~~~g~~~~~~~~~---~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      |.++|+.+.....+   .+..++|+++. ..++++|+++++++|+++.+++.
T Consensus       348 l~~~gi~v~~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~~~~~~  398 (401)
T 1fc4_A          348 LQKEGIYVTGFFYPVVPKGQARIRTQMS-AAHTPEQITRAVEAFTRIGKQLG  398 (401)
T ss_dssp             HHHTTEECCEECTTSSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHCCcEEeeecCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHhC
Confidence            88888543322211   23578999995 77899999999999999987763

>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}

Probab=99.92  E-value=2.1e-24  Score=215.24  Aligned_cols=310  Identities=10%  Similarity=0.007  Sum_probs=208.9

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEE-cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVI-QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF  201 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~  201 (499)
                      .++.+.++-+++++.+++++|.++..      ..+| |+|||+|+-+++......         .++..+++....|++.
T Consensus        52 r~~~~~~~~~~ar~~la~ll~~~~~~------evif~t~~~T~a~n~a~~~l~~~---------~~Gd~v~~~~~g~~~~  116 (377)
T 3e77_A           52 RSSDFAKIINNTENLVRELLAVPDNY------KVIFLQGGGCGQFSAVPLNLIGL---------KAGRCADYVVTGAWSA  116 (377)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHTCCTTE------EEEEESSHHHHHHHHHHHHHGGG---------STTCEEEECCCSHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHhCCCCCC------eEEEEcCchHHHHHHHHHhccCC---------CCCCeEEEEECCHHHH
Confidence            35667788888999999999997531      3577 689999988777654321         0234555555677663


Q ss_pred             --HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842          202 --AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV  279 (499)
Q Consensus       202 --~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l  279 (499)
                        .+.++..|.   .++.+|++.+  +..++++++.+++++++      +|.+++.+|.+|.+.|+     +|+++|+++
T Consensus       117 ~~~~~a~~~G~---~~~~~~~~~~--~~~~~~~~~~~i~~~t~------lV~~~h~et~tG~~~pi-----i~~~~~~~~  180 (377)
T 3e77_A          117 KAAEEAKKFGT---INIVHPKLGS--YTKIPDPSTWNLNPDAS------YVYYCANETVHGVEFDF-----IPDVKGAVL  180 (377)
T ss_dssp             HHHHHHTTTSE---EEECSCCCSS--SCSCCCGGGCCCCTTCS------CEEEESEETTTTEECSS-----CCCCTTCCE
T ss_pred             HHHHHHHHhCC---ceEEeccCCC--cCCCCChHHhccCCCcc------EEEEeCccCchheEchh-----hhccCCCEE
Confidence              334445566   7777887643  36777777666655443      78899999999999999     478899999


Q ss_pred             EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842          280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD  359 (499)
Q Consensus       280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  359 (499)
                      |||++++.+....+-        ...|.+++++|||++ |.|.|++++|++.. .+.-...+.|+.           +..
T Consensus       181 ~vD~~q~~g~~~id~--------~~~~~~~~s~~K~~g-p~G~g~l~~~~~~l-~~~~~~~p~~~~-----------~~~  239 (377)
T 3e77_A          181 VCDMSSNFLSKPVDV--------SKFGVIFAGAQKNVG-SAGVTVVIVRDDLL-GFALRECPSVLE-----------YKV  239 (377)
T ss_dssp             EEECTTTTTSSCCCG--------GGCSEEEEEGGGTTS-CTTCEEEEEETTSC-SCCCTTSCGGGC-----------HHH
T ss_pred             EEEcccccCCCCCch--------hhcCEEEEecccccC-CCccEEEEEcHHHH-hhccCCCCchhh-----------HHH
Confidence            999999877654432        124568999999995 99999999997532 111011122221           000


Q ss_pred             cccCCCCCC-----CcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CC--Cc-eEEEEEecCCCC
Q 010842          360 WQVGTGRRF-----KSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PR--HF-ALVCFRLNPYPH  429 (499)
Q Consensus       360 ~~~~~sr~~-----~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~--~~-~~v~f~~~~~~~  429 (499)
                      +.-...+.+     ....+-.+++.+-.. |++++.++..++++++++.|+++|++++.. ++  .. .+++|.+.....
T Consensus       240 ~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~  319 (377)
T 3e77_A          240 QAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRIGNAKG  319 (377)
T ss_dssp             HHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEESSTTC
T ss_pred             HhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEcCCCCC
Confidence            000011111     123555667777667 899999999999999999999999998643 22  33 368999875320


Q ss_pred             CCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          430 SGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       430 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                        +   .++...+.+.+.+.|++...+  ......+|+|+. ..+|++|||+++++|+++.++
T Consensus       320 --~---~~~~~~~l~~l~~~Gi~~~~g--~~~~g~iRiS~~-~~~t~edId~l~~al~~~~~~  374 (377)
T 3e77_A          320 --D---DALEKRFLDKALELNMLSLKG--HRSVGGIRASLY-NAVTIEDVQKLAAFMKKFLEM  374 (377)
T ss_dssp             --C---HHHHHHHHHHHHHTTEESCBC--CTTTCSEEEECC-TTSCHHHHHHHHHHHHHHHHH
T ss_pred             --c---hhHHHHHHHHHHHCCcEEeCC--CCcCCEEEEECC-CCCCHHHHHHHHHHHHHHHHH
Confidence              0   123345677777788543222  122345999995 789999999999999998765

>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}

Probab=99.92  E-value=2e-23  Score=212.14  Aligned_cols=337  Identities=14%  Similarity=0.109  Sum_probs=223.1

Q ss_pred             hHHHHHHHHHHHcccC---CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHH
Q 010842          102 TAGFLGEMLCACFNSV---GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRAL  178 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~  178 (499)
                      ++..+.+.+...+...   .. |...++..++++++.+|+.+.+|.+...     ...++|+|||+|+..++.++.+   
T Consensus        50 ~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~-----~~v~~t~g~t~a~~~~~~~~~~---  120 (407)
T 2zc0_A           50 PRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSP-----ENIVITIGGTGALDLLGRVLID---  120 (407)
T ss_dssp             CHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCG-----GGEEEESHHHHHHHHHHHHHCC---
T ss_pred             CHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCc-----ceEEEecCHHHHHHHHHHHhcC---
Confidence            3445555555544322   23 5555567899999999998888853211     1468999999999988887742   


Q ss_pred             hHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEE-EEecCCC
Q 010842          179 DAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFL-CATVGTT  257 (499)
Q Consensus       179 ~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~v-v~t~gtt  257 (499)
                              ++..|+++..+|.++..+++..|.   +++.+|++++   .+|+++|++++++....+..+.+| +...++|
T Consensus       121 --------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~n  186 (407)
T 2zc0_A          121 --------PGDVVITENPSYINTLLAFEQLGA---KIEGVPVDND---GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQN  186 (407)
T ss_dssp             --------TTCEEEEEESCCHHHHHHHHTTTC---EEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCT
T ss_pred             --------CCCEEEEeCCChHHHHHHHHHcCC---EEEEcccCCC---CCCHHHHHHHHHhhhcccCCceEEEECCCCCC
Confidence                    456788899999999999999999   9999998753   399999999997433232234455 5678899


Q ss_pred             cccccCChh---HHHHHHHHhCCEEEeeccccchhccCccchhhhcCC--CCCceeEecccccccCCCcceEEEEeCchh
Q 010842          258 STTAVDNVE---PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI--ERVDSFSFSPHKWLLSYLDCCCLWVKQPGL  332 (499)
Q Consensus       258 ~~G~id~l~---~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~--~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~  332 (499)
                      ++|.+.|++   +|+++|++||+++|+|++|+++.+....... +..+  ...+.++.+.+|+++....+|++++++ +.
T Consensus       187 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~-~~  264 (407)
T 2zc0_A          187 PMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVP-LKALDNEGRVIVAGTLSKVLGTGFRIGWIIAEG-EI  264 (407)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCC-GGGGCSSCCEEEEEESTTTTCTTSCCEEEECCH-HH
T ss_pred             CCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCC-hhhcCCCCCEEEEcccccccCCCcceEEEecCH-HH
Confidence            999998886   9999999999999999999886432111111 1111  123456778899999334589988863 32


Q ss_pred             HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--c--H-HHHHHHHHHHHHHHHHHHHHHhc-C
Q 010842          333 LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--G--V-LNLQSHIRSDIRLAKMFEGFVKS-D  406 (499)
Q Consensus       333 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g--~-~g~~~~~~~~~~~a~~l~~~L~~-~  406 (499)
                      . +.+.......                    +.....+..+++...+  +  . +.+++..++..++++++.+.|++ .
T Consensus       265 ~-~~~~~~~~~~--------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~  323 (407)
T 2zc0_A          265 L-KKVLMQKQPI--------------------DFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDIMLKALENHL  323 (407)
T ss_dssp             H-HHHHHHHTTT--------------------TSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHHHHHHHHHHC
T ss_pred             H-HHHHHHHHhh--------------------cCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            2 2221110000                    0011223333333333  2  2 34566777788889999999987 5


Q ss_pred             CCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC----CEEEEEEeccCCCCcHHHHHH
Q 010842          407 PRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG----GLYMLRFAVGASLTDERHVVA  481 (499)
Q Consensus       407 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~----g~~~lRi~~~~~~~t~~di~~  481 (499)
                      |++++..+.....+++++....         ...++.+.|.++ |+.+..+..+.    +..++|+++. .. |+++|++
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~-~~-~~~~i~~  392 (407)
T 2zc0_A          324 PNAEFTKPIAGMFVMFFLPEGA---------DGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFS-RP-SKEEIPI  392 (407)
T ss_dssp             TTSCBCCCSBSSEEEEECSTTC---------CHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECS-SS-CTTHHHH
T ss_pred             CCCEEecCCCcEEEEEEcCCCC---------CHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeC-CC-CHHHHHH
Confidence            7777654444456667764311         135677888877 75443332221    3468999996 33 7999999


Q ss_pred             HHHHHHHHHHHHhc
Q 010842          482 AWELIMEGADRLFK  495 (499)
Q Consensus       482 l~~~l~~~~~~l~~  495 (499)
                      ++++|.++.+++.+
T Consensus       393 ~~~~l~~~l~~~~~  406 (407)
T 2zc0_A          393 GIKKLAKLYKEKFG  406 (407)
T ss_dssp             HHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHhc
Confidence            99999999887754

>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*

Probab=99.92  E-value=2.1e-23  Score=214.07  Aligned_cols=324  Identities=12%  Similarity=0.051  Sum_probs=221.9

Q ss_pred             cccChhhHHHHHHHHHHHHHHcCC----CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC
Q 010842          121 WLASPASTELEIVVMDWLATMLKL----PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ  196 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g~----~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~  196 (499)
                      |....+..++++++.+|+.+..|.    +.+       ..++|+|||+||..++.+.++           ++..|+++..
T Consensus        82 y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~-------~v~~~~gg~~a~~~~~~~l~~-----------~gd~vl~~~p  143 (435)
T 3piu_A           82 FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPN-------HLVLTAGATSANETFIFCLAD-----------PGEAVLIPTP  143 (435)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHHTTTSSCCCGG-------GEEEEEHHHHHHHHHHHHHCC-----------TTCEEEEEES
T ss_pred             cCCCCCcHHHHHHHHHHHHHhhCCCCCCCHH-------HEEEcCChHHHHHHHHHHhcC-----------CCCeEEECCC
Confidence            444556689999998988877663    232       469999999999988887643           4567888999


Q ss_pred             CchhHHHHHH-HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHH
Q 010842          197 THSTFAKVCK-LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVA  272 (499)
Q Consensus       197 ~H~s~~ka~~-~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia  272 (499)
                      .|.++..++. ..|.   +++.+|.+++++|.+|+++|+++|++..+.+..+.+|+++.++|++|.+-+   +++|+++|
T Consensus       144 ~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~  220 (435)
T 3piu_A          144 YYPGFDRDLKWRTGV---EIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFV  220 (435)
T ss_dssp             CCTTHHHHTTTTTCC---EEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred             ccccHHHHHHHhcCC---EEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHH
Confidence            9999998887 7888   999999987666889999999999886666666778899999999999944   68888999


Q ss_pred             HHhCCEEEeeccccchhccCccchh---hhcCC--------CCCceeEecccccccC-CCcceEEEEeCchhHHHhhcCC
Q 010842          273 NEYGIWVHVDAAYAGSACICPEFRH---YLNGI--------ERVDSFSFSPHKWLLS-YLDCCCLWVKQPGLLVKALSTD  340 (499)
Q Consensus       273 ~~~~~~lhvD~A~g~~~~~~~~~~~---~~~g~--------~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~~l~~~~~~~  340 (499)
                      ++||+++++|++|+++.+.......   .....        .....++.+.||+++. ...+|+++.+++... +.+...
T Consensus       221 ~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~-~~~~~~  299 (435)
T 3piu_A          221 EDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVV-AAATKM  299 (435)
T ss_dssp             HHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHH-HHHHHH
T ss_pred             HHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHH-HHHHHH
Confidence            9999999999999875443221111   11110        1123678899999974 456899888665432 222211


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-----VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR  415 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~  415 (499)
                      ..+..                      ...+...+....+.     .+.+++..++..++++++.+.|++. ++++..+.
T Consensus       300 ~~~~~----------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~  356 (435)
T 3piu_A          300 SSFGL----------------------VSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKS-GISCLNGN  356 (435)
T ss_dssp             GGGSC----------------------CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-TCEECCCC
T ss_pred             hhcCC----------------------CCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCC
Confidence            11110                      01222222222221     2345667778888899999999987 88876544


Q ss_pred             CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeE--CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIV--GGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       416 ~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      ...++.+.+....  ... ......++.++|.++ |..+..+..+  .+..++|+++. .. ++++|++++++|.++.++
T Consensus       357 ~g~~~~~~l~~~~--~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~-~~-~~e~i~~~l~~l~~~l~~  431 (435)
T 3piu_A          357 AGLFCWVDMRHLL--RSN-TFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFA-NL-PERTLDLAMQRLKAFVGE  431 (435)
T ss_dssp             SSSEEEEECGGGS--SSS-SHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECS-SS-CHHHHHHHHHHHHHHHHH
T ss_pred             eeEEEEEEccccc--ccC-CchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEee-CC-CHHHHHHHHHHHHHHHHH
Confidence            4356666664321  000 111245677788777 7544433332  34578999985 33 899999999999999877


Q ss_pred             Hh
Q 010842          493 LF  494 (499)
Q Consensus       493 l~  494 (499)
                      +.
T Consensus       432 ~~  433 (435)
T 3piu_A          432 YY  433 (435)
T ss_dssp             HC
T ss_pred             Hh
Confidence            53

>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}

Probab=99.92  E-value=1.3e-23  Score=215.75  Aligned_cols=343  Identities=10%  Similarity=0.008  Sum_probs=224.1

Q ss_pred             HHHHHHHHHcccCC-cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHH--HHHHhHh
Q 010842          105 FLGEMLCACFNSVG-FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAAR--DRALDAV  181 (499)
Q Consensus       105 ~~~~~l~~~~n~~~-~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar--~~~~~~~  181 (499)
                      .+.+.+...+.... ..|....+..++++++.+|+.+.+|.+...     ...++|+|||+|+..++.+..  .      
T Consensus        61 ~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~-----~~i~~t~g~t~al~~~~~~l~~~~------  129 (437)
T 3g0t_A           61 IGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPA-----RACVPTVGSMQGCFVSFLVANRTH------  129 (437)
T ss_dssp             HHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHTTSC------
T ss_pred             HHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCc-----ccEEEeCCHHHHHHHHHHHHhcCC------
Confidence            34444444444233 455555556899999999999888875321     256999999999988887764  2      


Q ss_pred             hhhccCCe--EEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc
Q 010842          182 GAENMHKL--VVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST  259 (499)
Q Consensus       182 ~~~g~~~~--~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~  259 (499)
                           ++.  .|+++..+|.++..+++..|.   +++.+|++++ ++.+|+++|+++++..     .+.+|+++.++|+|
T Consensus       130 -----~gd~~~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~-----~~~~v~l~~p~npt  195 (437)
T 3g0t_A          130 -----KNREYGTLFIDPGFNLNKLQCRILGQ---KFESFDLFEY-RGEKLREKLESYLQTG-----QFCSIIYSNPNNPT  195 (437)
T ss_dssp             -----TTCSCCEEEEESCCHHHHHHHHHHTC---CCEEEEGGGG-CTTHHHHHHHHHHTTT-----CCCEEEEESSCTTT
T ss_pred             -----CCCccEEEEeCCCcHhHHHHHHHcCC---EEEEEeecCC-CCccCHHHHHHHHhcC-----CceEEEEeCCCCCC
Confidence                 455  688889999999999999999   9999999744 4789999999998321     23467788999999


Q ss_pred             cccCC---hhHHHHHHHHhCCEEEeeccccchhccCccch-------hhhcCCCCCceeEeccccccc-CCCcceEEEEe
Q 010842          260 TAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFR-------HYLNGIERVDSFSFSPHKWLL-SYLDCCCLWVK  328 (499)
Q Consensus       260 G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~-------~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r  328 (499)
                      |.+-|   +++|+++|++||+++|+|++|+.+.+......       ..+.+....+.++.+.||+++ ....+|+++.+
T Consensus       196 G~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  275 (437)
T 3g0t_A          196 WQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSSKAFSYAGQRIGVLMIS  275 (437)
T ss_dssp             CCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEESTTTTSCGGGCCEEEEEC
T ss_pred             CCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCccCCCCccceeEEEEEC
Confidence            99976   77789999999999999999986543210000       111222346688899999997 44568888876


Q ss_pred             CchhHHH-hhc-CCccCCCCCCCCCCCccc-CCCcccCCCCCCCcHHHHHHHHHhcHH--H---HHHHHHHHHHHHHHHH
Q 010842          329 QPGLLVK-ALS-TDPEYLKNKPSESNSVVD-FKDWQVGTGRRFKSLRLWMVLRSYGVL--N---LQSHIRSDIRLAKMFE  400 (499)
Q Consensus       329 ~~~~l~~-~~~-~~~~yl~~~~~~~~~~~~-~~~~~~~~sr~~~al~~~~~l~~~g~~--g---~~~~~~~~~~~a~~l~  400 (499)
                      ++ .. + .+. ....+.....     ... +.......+.....+..+++...+...  +   ++++.++..++++++.
T Consensus       276 ~~-~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~  348 (437)
T 3g0t_A          276 GK-LY-EREYPDLEESFGRLRF-----GEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMK  348 (437)
T ss_dssp             HH-HH-HCBCGGGHHHHSCSBH-----HHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHH
T ss_pred             HH-Hh-hhhhhcccccccccch-----hHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHH
Confidence            42 22 2 100 0000000000     000 000000000011234444444444322  2   7888899999999999


Q ss_pred             HHHhcCCCeEEE------cC-CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECC--EEEEEEeccC
Q 010842          401 GFVKSDPRFEIV------VP-RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGG--LYMLRFAVGA  471 (499)
Q Consensus       401 ~~L~~~~~~~~~------~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g--~~~lRi~~~~  471 (499)
                      +.|+++ ++++.      .+ .....+++.+.+..          ..++.++|.++|+.+.....+..  ..++|++++ 
T Consensus       349 ~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~l~~~L~~~gi~v~~~~~~~~~~~~~iRis~~-  416 (437)
T 3g0t_A          349 KMFLDN-GFNIVYDKDGNEPLADGFYFTVGYKGMD----------SSKLIEKFVRYGMCAITLKTTGSKRNEAMRICTS-  416 (437)
T ss_dssp             HHHHTT-TEEESSCEETTEECCSSSEEEEEETTCC----------HHHHHHHHHHTTEECEESTTTTCCCTTCEEEECS-
T ss_pred             HHHHHc-CCEEeccccCCCCCceeEEEEEecCCCC----------HHHHHHHHHHcCeEEeeccccCCCCCCEEEEEEe-
Confidence            999998 88887      24 45556666665322          45677888888855443322221  156999995 


Q ss_pred             CCCcHHHHHHHHHHHHHHHHH
Q 010842          472 SLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       472 ~~~t~~di~~l~~~l~~~~~~  492 (499)
                      . .+++||++++++|+++.++
T Consensus       417 ~-~~~e~i~~~~~~l~~~~~~  436 (437)
T 3g0t_A          417 L-LPESQFPDLEKRLQMLNAE  436 (437)
T ss_dssp             S-SCGGGHHHHHHHHHHHHHH
T ss_pred             c-CCHHHHHHHHHHHHHHHhc
Confidence            3 4899999999999987653

>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*

Probab=99.92  E-value=1.7e-23  Score=214.56  Aligned_cols=358  Identities=13%  Similarity=0.079  Sum_probs=224.5

Q ss_pred             CccccccCCCCCChHHHHHHHHHHHccc---C-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHH
Q 010842           89 SPNFFAFFPATVSTAGFLGEMLCACFNS---V-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSD  164 (499)
Q Consensus        89 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~---~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~  164 (499)
                      ...|+++...++.++.++. .+...+..   + ...|..++.......++++++++++|.+.+       ..++|+|||+
T Consensus        18 ~~~~Ld~~~~~~~~~~v~~-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~-------~v~~~~g~t~   89 (432)
T 3a9z_A           18 RKVYMDYNATTPLEPEVIQ-AVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQ-------DIIFTSGGTE   89 (432)
T ss_dssp             CCEECBTTTCCCCCHHHHH-HHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESCHHH
T ss_pred             CcEEeeCCccCCCCHHHHH-HHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcC-------eEEEeCChHH
Confidence            3456666554444554443 33333321   1 123444556677888999999999998644       4699999999


Q ss_pred             HHHHHHHHHHHHHHh---Hhhhh------cc-CCeEEEcCCCCchhHHHHHHH----hCCCCCCeEEeeCCCCCCCccCH
Q 010842          165 SILVTLIAARDRALD---AVGAE------NM-HKLVVYGSDQTHSTFAKVCKL----AGVSPANIRALPTSVDANFSLSP  230 (499)
Q Consensus       165 A~~~al~~ar~~~~~---~~~~~------g~-~~~~i~~s~~~H~s~~ka~~~----~G~g~~~v~~v~~~~~~~~~~d~  230 (499)
                      |+..++.+..+....   ..+.+      +. ....|+++..+|.++.++...    .|.   +++.||++++ ++.+|+
T Consensus        90 a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~---~v~~v~~~~~-~~~~d~  165 (432)
T 3a9z_A           90 SNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVA---EVTFVPVSKV-NGQVEV  165 (432)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSC---EEEEECCCTT-TSSCCH
T ss_pred             HHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCc---EEEEEecCcc-cCCcCH
Confidence            999998887532111   00000      00 114788899999998776543    577   8999998752 358999


Q ss_pred             HHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC----------CEEEeeccccchhccCccchhhhc
Q 010842          231 QLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG----------IWVHVDAAYAGSACICPEFRHYLN  300 (499)
Q Consensus       231 ~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~----------~~lhvD~A~g~~~~~~~~~~~~~~  300 (499)
                      ++|+++++++      +.+|+++.++|+||.+.|+++|.++|+++|          +|+|+|++|+.+....+ ...   
T Consensus       166 ~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~-~~~---  235 (432)
T 3a9z_A          166 EDILAAVRPT------TCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVD-VED---  235 (432)
T ss_dssp             HHHHHTCCTT------EEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCC-HHH---
T ss_pred             HHHHHhccCC------ceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccC-hhh---
Confidence            9999988643      458899999999999999999999999999          99999999976532211 111   


Q ss_pred             CCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCC-CCCCC-cHHHHHHHH
Q 010842          301 GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGT-GRRFK-SLRLWMVLR  378 (499)
Q Consensus       301 g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~-sr~~~-al~~~~~l~  378 (499)
                       . .+|++++++||+++ |. +|+++++++...   ....+.+.... .    .     ...+. +.... ...+..++.
T Consensus       236 -~-~~d~~~~s~~K~~g-~~-~G~~~~~~~~~~---~~~~~~~~~~~-~----~-----~~~~~~~~~~~~~~a~~aal~  298 (432)
T 3a9z_A          236 -L-GVDFLTIVGHKFYG-PR-IGALYVRGVGKL---TPLYPMLFGGG-Q----E-----RNFRPGTENTPMIAGLGKAAD  298 (432)
T ss_dssp             -H-CCSEEEEEGGGTTC-CS-CEEEEETTBTTT---BCCCCSCCSSC-G----G-----GGTSCSCCCHHHHHHHHHHHH
T ss_pred             -c-CCCEEEEehhHhcC-Cc-ceEEEEcccccc---CCcCceeecCC-c----c-----ccccCCCcCHHHHHHHHHHHH
Confidence             1 38999999999975 66 999999865311   11112111110 0    0     00011 11111 122333444


Q ss_pred             HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE--cC-----CCceEEEEEecCCCCCCcchhHHHHHHHHHHHH----
Q 010842          379 SYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV--VP-----RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN----  447 (499)
Q Consensus       379 ~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~--~~-----~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~----  447 (499)
                      .+ .++++++.++..++++++.+.|++++++++.  .+     ....+++|.+....    .  +  ...+.+.+.    
T Consensus       299 ~~-~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~--~~~~~~~l~~i~~  369 (432)
T 3a9z_A          299 LV-SENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQ----L--R--GYMVLAQCQTLLA  369 (432)
T ss_dssp             HH-HHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTT----C--C--HHHHHHHCSSEEC
T ss_pred             HH-HhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCC----C--c--HHHHHHHhcCeEE
Confidence            33 3578889999999999999999886665443  22     12236778776421    0  0  123333321    


Q ss_pred             hcCCEEEEee------e--ECC------EEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          448 STGRVYLTHT------I--VGG------LYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       448 ~~g~~~~~~~------~--~~g------~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      +.|..+....      .  ..|      ..++|+++. ..+|++|+++++++|+++.+++.+
T Consensus       370 ~~G~~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~-~~~t~eei~~~~~~l~~~~~~~~~  430 (432)
T 3a9z_A          370 SVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVG-RSTTRAEVDLIVQDLKQAVNQLEG  430 (432)
T ss_dssp             BSSCGGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred             eccccccCCCCCCccHHHHhcCCCccccCceEEEEcC-CCCCHHHHHHHHHHHHHHHHHhcC
Confidence            1121110000      0  001      257999995 778999999999999999887643

>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}

Probab=99.92  E-value=1.1e-23  Score=212.26  Aligned_cols=318  Identities=10%  Similarity=0.035  Sum_probs=211.9

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH--
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF--  201 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~--  201 (499)
                      ++...++.+++.+++++++|.+..        .++|+|||+|+..++... .           ++..|+++...|++.  
T Consensus        30 ~~~~~~~~~~~~~~l~~~~~~~~~--------v~~~~sgt~a~~~~~~~~-~-----------~gd~vi~~~~~~~~~~~   89 (379)
T 3ke3_A           30 SKAFQEVMNDLLSNLKTVYNAEAA--------VIIPGSGTYGMEAVARQL-T-----------IDEDCLIIRNGWFSYRW   89 (379)
T ss_dssp             SHHHHHHHHHHHHHHHHHHTCSEE--------EEEESCHHHHHHHHHHHH-C-----------TTCEEEEEECSHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHhCCCCE--------EEEcCChhHHHHHHHHhC-C-----------CCCeEEEEeCCchhHHH
Confidence            666778888899999999998743        488999999988766432 1           455677777788763  


Q ss_pred             HHHHHHhCCCCCCeEEeeCCCCC------C-CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHH
Q 010842          202 AKVCKLAGVSPANIRALPTSVDA------N-FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEV  271 (499)
Q Consensus       202 ~ka~~~~G~g~~~v~~v~~~~~~------~-~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~i  271 (499)
                      ...+...|++. +++.++++..+      . ..+|+++|++++++..     +.+|++++++|++|.+.|   +++|+++
T Consensus        90 ~~~~~~~g~~~-~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~~~G~~~~~~~l~~i~~~  163 (379)
T 3ke3_A           90 TQILEKGKFAK-SSTVLTAERTEDTEAPKPFAPVDIETAVAKIKEDK-----SAIVYAPHVETSSGIILSEEYIKALSEA  163 (379)
T ss_dssp             HHHHHHHCCSS-EEEEEECEESSCCSSCCCEECCCHHHHHHHHHHHT-----CSEEEEESEETTTTEECCHHHHHHHHHH
T ss_pred             HHHHHHhCCCC-ceEEEeccccccccccCCCCCCCHHHHHHHHhhcC-----CcEEEEEeecCCCceeCCHHHHHHHHHH
Confidence            34566666532 56777765311      1 2589999999996531     237888999999999999   9999999


Q ss_pred             HHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhc-CCccCCCCCCCC
Q 010842          272 ANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALS-TDPEYLKNKPSE  350 (499)
Q Consensus       272 a~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~-~~~~yl~~~~~~  350 (499)
                      |++||+++|+|++++ +....+- .  ..   ++|.+++++|||+++|.|+|+++++++. +..... ...++..+..  
T Consensus       164 ~~~~~~~li~D~~~~-g~~~~~~-~--~~---~~d~~~~s~~K~l~~~~g~g~~~~~~~~-~~~l~~~~~~~~~~~~~--  233 (379)
T 3ke3_A          164 VHSVGGLLVIDCIAS-GCVWLDM-K--EL---GIDVLISAPQKGWSSTPCAGLVMLSAAA-IKKVESTESNCFSLDLK--  233 (379)
T ss_dssp             HHHTTCEEEEECTTC-TTCCCCH-H--HH---TCSEEEECTTTTTCSCCCEEEEEECHHH-HHHHHTCCCSCSTTCHH--
T ss_pred             HHHcCCEEEEEeccc-CCccccc-c--cc---CCCEEEecchhhcCCCCceEEEEECHHH-HHhhhcCCCCceeecHH--
Confidence            999999999999987 4322211 1  01   3899999999999999999999987653 222211 1112211000  


Q ss_pred             CCCcccCCCc--cc-CCCCCC-------CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC--Cce
Q 010842          351 SNSVVDFKDW--QV-GTGRRF-------KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR--HFA  418 (499)
Q Consensus       351 ~~~~~~~~~~--~~-~~sr~~-------~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~--~~~  418 (499)
                           .+.+.  .. .+++.+       ....+..++..+..+|++++.++..++++++++.|+++ +++++.++  ..+
T Consensus       234 -----~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~  307 (379)
T 3ke3_A          234 -----QWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAP  307 (379)
T ss_dssp             -----HHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCS
T ss_pred             -----HHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCc
Confidence                 00000  00 011111       11234456666666788999999999999999999988 78876543  234


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee-----ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI-----VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-----~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ++.....+.        ..  ..+.+.|.++|+.+..+..     ..+..++|++++ ..+|++||++++++|+++.+++
T Consensus       308 ~i~~~~~~~--------~~--~~~~~~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~-~~~t~~di~~~~~~l~~~l~~~  376 (379)
T 3ke3_A          308 GVVVSYTER--------DD--MHKGSAFAEAGLQIAAGVPLKVGEPDNFKTFRLGLF-GLDKLTDIDGTVERFEKALDEV  376 (379)
T ss_dssp             SEEEEECSC--------HH--HHSSHHHHHTTCCCEECCCCSSCCCTTCCEEEEECC-SHHHHTCHHHHHHHHHHHHHHH
T ss_pred             eEEEEccCC--------cc--hHHHHHHHHCCeEEeCCccccccccCcCCEEEEeCC-cCCCHHHHHHHHHHHHHHHHHh
Confidence            333322221        11  1124566777865433321     112467999995 7789999999999999998877


Q ss_pred             h
Q 010842          494 F  494 (499)
Q Consensus       494 ~  494 (499)
                      .
T Consensus       377 ~  377 (379)
T 3ke3_A          377 L  377 (379)
T ss_dssp             H
T ss_pred             c
Confidence            5

>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1

Probab=99.92  E-value=1e-23  Score=212.86  Aligned_cols=326  Identities=10%  Similarity=0.074  Sum_probs=221.2

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCc-cEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTG-GGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      ..+.+.+...+......|...++..++++++.+|+.+.+|.+...     . ..++|+|||+|+..++.+..+       
T Consensus        46 ~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~-----~~~v~~~~g~~~a~~~~~~~~~~-------  113 (386)
T 1u08_A           46 RYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDA-----DSDITVTAGATEALYAAITALVR-------  113 (386)
T ss_dssp             HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCT-----TTTEEEESSHHHHHHHHHHHHCC-------
T ss_pred             HHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCCEEEcCChHHHHHHHHHHhCC-------
Confidence            445566665554333456555668899999999999998864221     1 369999999999888877632       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|+++..+|.++..+++..|.   +++.+|.+.+ +|.+|+++|++++.++      +.+|+++.++|++|.+
T Consensus       114 ----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~  179 (386)
T 1u08_A          114 ----NGDEVICFDPSYDSYAPAIALSGG---IVKRMALQPP-HFRVDWQEFAALLSER------TRLVILNTPHNPSATV  179 (386)
T ss_dssp             ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECCTT-TCCCCHHHHHHHCCTT------EEEEEEESSCTTTCCC
T ss_pred             ----CCCEEEEeCCCchhHHHHHHHcCC---EEEEeecCcc-cCcCCHHHHHHhhccc------CEEEEEeCCCCCCCcc
Confidence                456788899999999999999999   9999998754 4789999999988532      4577788999999999


Q ss_pred             CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhh--cCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842          263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL--NGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA  336 (499)
Q Consensus       263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~  336 (499)
                      -|   +++|+++|++||+|+++|++|+.+.+.........  .+....|.++.++||+++.| ..+|+++++++  +.+.
T Consensus       180 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--~~~~  257 (386)
T 1u08_A          180 WQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAP--ISAE  257 (386)
T ss_dssp             CCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHH--HHHH
T ss_pred             CCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCHH--HHHH
Confidence            65   78999999999999999999987543221111111  11124789999999999744 34899888643  2222


Q ss_pred             hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842          337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP  414 (499)
Q Consensus       337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~  414 (499)
                      +.....+..                  .+  ...+...++...+  +.+++++..++..++++++.+.|++. ++++..+
T Consensus       258 l~~~~~~~~------------------~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~  316 (386)
T 1u08_A          258 IRKVHQYLT------------------FS--VNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNES-RLEILPC  316 (386)
T ss_dssp             HHHHHHHHT------------------SS--CCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSS-SCEECCC
T ss_pred             HHHHHHhhc------------------cC--CChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCC
Confidence            211100000                  00  0122222222222  25667888889999999999999987 8887644


Q ss_pred             CCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeE----CCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIV----GGLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~----~g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      .....+++.+....   ..    ...++.++|. +.|+.+..+..+    .+..++|+++.   +++++|++++++|++
T Consensus       317 ~~g~~~~~~~~~~~---~~----~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~---~~~~~i~~~~~~l~~  385 (386)
T 1u08_A          317 EGTYFLLVDYSAVS---TL----DDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFA---KKESTLLAAAERLRQ  385 (386)
T ss_dssp             CBSSEEEEECTTTC---CS----CHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECC---SCHHHHHHHHHHHTT
T ss_pred             CceEEEEEecCCCC---CC----CHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEc---CCHHHHHHHHHHHhh
Confidence            44456667665320   00    1345667666 467554433333    24578999996   489999999998864

>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}

Probab=99.92  E-value=6.2e-23  Score=207.50  Aligned_cols=329  Identities=13%  Similarity=0.033  Sum_probs=218.7

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ..+.+.+...+......|....+..++++++.+++.+.+|.+...     ...++|+|||+|+..++.+..+        
T Consensus        47 ~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~v~~t~g~~~al~~~~~~l~~--------  113 (391)
T 3h14_A           47 RGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDP-----GRVVITPGSSGGFLLAFTALFD--------  113 (391)
T ss_dssp             HHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHHCC--------
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCH-----HHEEEecChHHHHHHHHHHhcC--------
Confidence            345556666665444556555667899999999999998864321     2579999999999888876632        


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD  263 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id  263 (499)
                         ++..|+++..+|.++...++..|.   +++.+|++++++|.+|+++|+++         .+.+|+++.++|++|.+-
T Consensus       114 ---~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~---------~~~~v~i~~p~nptG~~~  178 (391)
T 3h14_A          114 ---SGDRVGIGAPGYPSYRQILRALGL---VPVDLPTAPENRLQPVPADFAGL---------DLAGLMVASPANPTGTML  178 (391)
T ss_dssp             ---TTCEEEEEESCCHHHHHHHHHTTC---EEEEEECCGGGTTSCCHHHHTTS---------CCSEEEEESSCTTTCCCC
T ss_pred             ---CCCEEEEcCCCCccHHHHHHHcCC---EEEEeecCcccCCCCCHHHHHhc---------CCeEEEECCCCCCCCccC
Confidence               456788899999999999999999   99999998766688999999876         234788889999999997


Q ss_pred             C---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccccccc-CCCcceEEEEeCchhHHHhhcC
Q 010842          264 N---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLLVKALST  339 (499)
Q Consensus       264 ~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l~~~~~~  339 (499)
                      |   +++|+++|++||+++|+|++|+.+..... .... ......+.++.+.+|+++ ....+|+++.+++. . +.+..
T Consensus       179 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~-~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~-~-~~~~~  254 (391)
T 3h14_A          179 DHAAMGALIEAAQAQGASFISDEIYHGIEYEAK-AVTA-LELTDECYVINSFSKYFSMTGWRVGWMVVPEDQ-V-RVVER  254 (391)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC-CCCG-GGTCSSSEEEEESSSTTCCTTSCCEEEECCGGG-H-HHHHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEECcchhcccCCC-CcCh-hhcCCCEEEEEechhccCCccceeEEEEeCHHH-H-HHHHH
Confidence            7   88999999999999999999987543221 1111 112235577778999997 44668888876542 2 22211


Q ss_pred             CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCc-
Q 010842          340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHF-  417 (499)
Q Consensus       340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~-  417 (499)
                      ...+.                    +-....+..++++..+ +.+.+++..++..++++++.+.|++.+ +..+.++.. 
T Consensus       255 ~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~~  313 (391)
T 3h14_A          255 IAQNM--------------------FICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKAG-FTRIAPPDGA  313 (391)
T ss_dssp             HHHHT--------------------TCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHT-CCCBCCCCBT
T ss_pred             HHhhh--------------------ccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcC-CCcccCCCee
Confidence            00000                    0001233333333333 567788888999999999999999874 443334443 


Q ss_pred             eEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC---CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG---GLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~---g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ..+++.+....        ....++.++|.++ |+.+..+..+.   +..++|++++ .  ++++|++++++|.++.++.
T Consensus       314 ~~~~~~~~~~~--------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~-~--~~~~i~~~l~~l~~~~~~~  382 (391)
T 3h14_A          314 FYVYADVSDLT--------DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYA-R--ATADIEEGLDRLEAFMQAR  382 (391)
T ss_dssp             TEEEEECTTTC--------SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECC-S--CHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEEecCccC--------CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEec-C--CHHHHHHHHHHHHHHHHHh
Confidence            33444554311        0135667776665 85544433332   3578999996 2  7899999999999998876


Q ss_pred             hcc
Q 010842          494 FKG  496 (499)
Q Consensus       494 ~~~  496 (499)
                      ...
T Consensus       383 ~~~  385 (391)
T 3h14_A          383 GEG  385 (391)
T ss_dssp             ---
T ss_pred             ccc
Confidence            443

>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}

Probab=99.92  E-value=1.5e-23  Score=212.57  Aligned_cols=299  Identities=12%  Similarity=0.061  Sum_probs=211.7

Q ss_pred             hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842          125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka  204 (499)
                      .+...+.+++.+++++++|.+.         .++|+|||+|+..++.+..+           ++..|+++..+|.++..+
T Consensus        84 ~g~~~~~~~l~~~la~~~g~~~---------v~~~~ggt~a~~~~~~~~~~-----------~gd~V~~~~p~~~~~~~~  143 (398)
T 3a2b_A           84 NGTLDIHVELEEKLSAYVGKEA---------AILFSTGFQSNLGPLSCLMG-----------RNDYILLDERDHASIIDG  143 (398)
T ss_dssp             TCCCHHHHHHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHHSSC-----------TTCEEEEETTCCHHHHHH
T ss_pred             cCCcHHHHHHHHHHHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEECCccCHHHHHH
Confidence            3456788888999999999742         49999999999988887632           566889999999999999


Q ss_pred             HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecc
Q 010842          205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAA  284 (499)
Q Consensus       205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A  284 (499)
                      ++..|.   +++.+|.       +|+++|++++++...  ..+.+|+.+.++|++|.+.|+++|.++|++||+++++|++
T Consensus       144 ~~~~g~---~~~~v~~-------~d~~~l~~~l~~~~~--~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~  211 (398)
T 3a2b_A          144 SRLSFS---KVIKYGH-------NNMEDLRAKLSRLPE--DSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDA  211 (398)
T ss_dssp             HHHSSS---EEEEECT-------TCHHHHHHHHHTSCS--SSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECT
T ss_pred             HHHcCC---ceEEeCC-------CCHHHHHHHHHhhcc--CCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECC
Confidence            999999   8888875       589999999865211  1356788899999999999999999999999999999999


Q ss_pred             ccchhccCccchhh--hcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCc
Q 010842          285 YAGSACICPEFRHY--LNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDW  360 (499)
Q Consensus       285 ~g~~~~~~~~~~~~--~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~  360 (499)
                      |+.+.+. ......  ..++ +++|.++.++||+++ |.| |+++.++ +.. +.+.. ...+....             
T Consensus       212 ~~~~~~~-~~~~~~~~~~~~~~~~di~~~s~sK~~~-~~G-G~~~~~~-~~~-~~l~~~~~~~~~~~-------------  273 (398)
T 3a2b_A          212 HSLGVIG-HKGAGTASHFGLNDDVDLIMGTFSKSLA-SLG-GFVAGDA-DVI-DFLKHNARSVMFSA-------------  273 (398)
T ss_dssp             TTTTTSS-GGGCCHHHHHTCGGGCSEEEEESSSTTC-SSC-EEEEECH-HHH-HHHHHHCHHHHSSB-------------
T ss_pred             CcccccC-CCCCchHhhcCCCcCCeEEEeccccccc-CCC-cEEEeCH-HHH-HHHHHhcccceecC-------------
Confidence            9765431 111111  1132 247999999999998 555 8888754 322 22211 11111110             


Q ss_pred             ccCCCCCCCcHH---HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHH
Q 010842          361 QVGTGRRFKSLR---LWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEM  437 (499)
Q Consensus       361 ~~~~sr~~~al~---~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~  437 (499)
                            ....+.   +..+++.+  +.++++.++..++++++.+.|++. ++++. ++..+++++.+..         ..
T Consensus       274 ------~~~~~~~a~~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~~~~~~---------~~  334 (398)
T 3a2b_A          274 ------SMTPASVASTLKALEII--QNEPEHIEKLWKNTDYAKAQLLDH-GFDLG-ATESPILPIFIRS---------NE  334 (398)
T ss_dssp             ------CCCHHHHHHHHHHHHHH--HHCTHHHHHHHHHHHHHHHHHHHT-TCCBC-SCCSSEEEEECCC---------HH
T ss_pred             ------CCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHhc-CCCcC-CCCCCEEEEEcCC---------HH
Confidence                  011122   22344432  335677888889999999999987 77765 4455667776632         22


Q ss_pred             HHHHHHHHHHhcCCEEEEeeeEC---CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          438 LNRKLLDWVNSTGRVYLTHTIVG---GLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       438 ~~~~l~~~l~~~g~~~~~~~~~~---g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ...++.++|.++|+.+.....+.   +..++|+++. ..++++++++++++|+++.+++
T Consensus       335 ~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~-~~~~~e~i~~~~~~l~~~l~~~  392 (398)
T 3a2b_A          335 KTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLM-ATHTYDQIDEAIEKMVKVFKQA  392 (398)
T ss_dssp             HHHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECC-TTCCHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEe-CCCCHHHHHHHHHHHHHHHHHh
Confidence            35678888888885543332221   3568999995 6689999999999999988765

>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*

Probab=99.92  E-value=2.8e-24  Score=217.45  Aligned_cols=309  Identities=13%  Similarity=0.088  Sum_probs=208.0

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      .++...+++++    +++++|.+.         +++++|||+|+..++.+++-.          ++..|+++..+|.++.
T Consensus        54 ~~~~~~~l~~~----la~~~~~~~---------~i~~~~gt~al~~~l~~~~~~----------~gd~vl~~~~~~~~~~  110 (391)
T 3dr4_A           54 VGRFIVEFEKA----FADYCGVKH---------AIACNNGTTALHLALVAMGIG----------PGDEVIVPSLTYIASA  110 (391)
T ss_dssp             CSHHHHHHHHH----HHHHHTCSE---------EEEESSHHHHHHHHHHHHTCC----------TTCEEEEESSSCTHHH
T ss_pred             CChHHHHHHHH----HHHHhCCCc---------EEEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCchHHHH
Confidence            45666677766    777788763         499999999999888876211          4667999999999999


Q ss_pred             HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842          203 KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD  282 (499)
Q Consensus       203 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD  282 (499)
                      .+++..|+   +++.+|++++ ++.+|+++|++++++++      .+|+   .++++|.+.|+++|+++|+++|+++++|
T Consensus       111 ~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~~------~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D  177 (391)
T 3dr4_A          111 NSVTYCGA---TPVLVDNDPR-TFNLDAAKLEALITPRT------KAIM---PVHLYGQICDMDPILEVARRHNLLVIED  177 (391)
T ss_dssp             HHHHHTTC---EEEEECBCTT-TCSBCGGGSGGGCCTTE------EEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHCCC---EEEEEecCcc-ccCcCHHHHHHhcCCCc------eEEE---EECCCCChhhHHHHHHHHHHcCCEEEEE
Confidence            99999999   9999999854 47999999999886432      2444   4679999999999999999999999999


Q ss_pred             ccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCccc
Q 010842          283 AAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQV  362 (499)
Q Consensus       283 ~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~  362 (499)
                      ++|+.+....+...   ..+..+++++++.||+++++ .+|+++.+++.... .+.....+-....    .  .+  +..
T Consensus       178 ~a~~~g~~~~~~~~---~~~~di~~~S~s~~K~l~~g-~gg~~~~~~~~~~~-~~~~~~~~g~~~~----~--~~--~~~  244 (391)
T 3dr4_A          178 AAEAVGATYRGKKS---GSLGDCATFSFFGNAIITTG-EGGMITTNDDDLAA-KMRLLRGQGMDPN----R--RY--WFP  244 (391)
T ss_dssp             CTTCTTCEETTEET---TSSSSEEEEECBTTSSSCCB-SCEEEEESCHHHHH-HHHHHHBTTCCTT----S--TT--CCS
T ss_pred             CcccccceECCeee---cccCCEEEEECCCCCcCCcC-CeEEEEECCHHHHH-HHHHHHhcCCCCC----C--cc--ccc
Confidence            99986544332211   11223566777799999763 46777676654321 1111000000000    0  00  011


Q ss_pred             CCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--C-----CceEEEEEecCCCCCCcchh
Q 010842          363 GTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--R-----HFALVCFRLNPYPHSGSADT  435 (499)
Q Consensus       363 ~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~-----~~~~v~f~~~~~~~~~~~~~  435 (499)
                      ..+..+....+.+++.....++++++.++..++++++.+.|++. ++++..+  +     ...++.+.+....       
T Consensus       245 ~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~i~~~~~~-------  316 (391)
T 3dr4_A          245 IVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQKLARL-GNRVTKPHVALTGRHVFWMYTVRLGEGL-------  316 (391)
T ss_dssp             SCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCCCCTTSCCCCSSEEEEECSSC-------
T ss_pred             ccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcCCCCCCcceeEEEEEEECCcc-------
Confidence            12233344455555555555788899999999999999999998 8877654  1     2234556554310       


Q ss_pred             HHHHHHHHHHHHhcCCEEEEeee-------E-------------CCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          436 EMLNRKLLDWVNSTGRVYLTHTI-------V-------------GGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       436 ~~~~~~l~~~l~~~g~~~~~~~~-------~-------------~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      .....++.+.|.++|+.+..+..       +             .....+|+++ ++.+|++||++++++|+++
T Consensus       317 ~~~~~~l~~~L~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~-~~~~t~edi~~~~~~l~~~  389 (391)
T 3dr4_A          317 STTRDQVIKDLDALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPT-HAGLTEADIDRVIAALDQV  389 (391)
T ss_dssp             SSCHHHHHHHHHHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECC-CTTCCHHHHHHHHHHHHTT
T ss_pred             chhHHHHHHHHHHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccC-CCCCCHHHHHHHHHHHHHH
Confidence            00145678888888865433210       0             0135799998 5899999999999999864

>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}

Probab=99.92  E-value=6.9e-25  Score=220.46  Aligned_cols=323  Identities=14%  Similarity=0.088  Sum_probs=211.3

Q ss_pred             HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      +..+.+.+...+...  .|..++...++|++    +++++|.+.         +++++|||+|+..++.++.-.      
T Consensus        16 ~~~~~~a~~~~~~~~--~~~~~~~~~~l~~~----la~~~~~~~---------~i~~~sgt~al~~~l~~l~~~------   74 (373)
T 3frk_A           16 EYEIKFKFEEIYKRN--WFILGDEDKKFEQE----FADYCNVNY---------CIGCGNGLDALHLILKGYDIG------   74 (373)
T ss_dssp             HHHHHHHHHHHHHHT--CCSSSHHHHHHHHH----HHHHHTSSE---------EEEESCHHHHHHHHHHHTTCC------
T ss_pred             CHHHHHHHHHHHHCC--CccCCchHHHHHHH----HHHHhCCCe---------EEEeCCHHHHHHHHHHHcCCC------
Confidence            334444455444432  24556777777777    777788753         499999999999888876211      


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|+++..+|.++..+++..|+   +++.+|++++ ++.+|+++|+++++++      +.+|+   +++++|.+
T Consensus        75 ----~gd~Vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~l~~~------~~~v~---~~n~~G~~  137 (373)
T 3frk_A           75 ----FGDEVIVPSNTFIATALAVSYTGA---KPIFVEPDIR-TYNIDPSLIESAITEK------TKAII---AVHLYGQP  137 (373)
T ss_dssp             ----TTCEEEEETTSCTHHHHHHHHHSC---EEEEECEETT-TTEECGGGTGGGCCTT------EEEEE---EECCTTCC
T ss_pred             ----CcCEEEECCCCcHHHHHHHHHcCC---EEEEEecccc-ccCcCHHHHHHhcCCC------CeEEE---EECCCcCc
Confidence                466899999999999999999999   9999999854 4799999999988653      33454   56789999


Q ss_pred             CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEec--ccccccCCCcceEEEEeCchhHHHhhcCC
Q 010842          263 DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFS--PHKWLLSYLDCCCLWVKQPGLLVKALSTD  340 (499)
Q Consensus       263 d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~--~hK~l~~p~~~g~l~~r~~~~l~~~~~~~  340 (499)
                      .|+++|.++|+++|+++|+|+||+.+......  .  .+ ..+|.++++  +||+++.+..+|+++.+++....+.....
T Consensus       138 ~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~--~--~~-~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~  212 (373)
T 3frk_A          138 ADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGM--K--VG-SLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALS  212 (373)
T ss_dssp             CCHHHHHHHHHHHTCEEEEECTTCTTCEETTE--E--TT-SSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHcCCEEEEECCcccCCEECCE--e--cc-ccccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHH
Confidence            99999999999999999999999865432211  1  11 125777766  77999764456777776654322111000


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC---c
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH---F  417 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---~  417 (499)
                       .+-...        .+.  ....+..+....+.+++.....+++++..++..++++++.+.|++++ +++...+.   .
T Consensus       213 -~~g~~~--------~~~--~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~  280 (373)
T 3frk_A          213 -NYGSEK--------KYH--HIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKH  280 (373)
T ss_dssp             -BTTCSB--------TTB--CCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEEC
T ss_pred             -hcCccc--------CCc--cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCce
Confidence             000000        000  01112222333444444444457788899999999999999999987 76543221   1


Q ss_pred             eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee--eEC---------------------CEEEEEEeccCCCC
Q 010842          418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT--IVG---------------------GLYMLRFAVGASLT  474 (499)
Q Consensus       418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~~---------------------g~~~lRi~~~~~~~  474 (499)
                      +.+.|.+....          ...+.+.|.++|+.+-...  ...                     ....+|+++ ++.+
T Consensus       281 ~~~~~~~~~~~----------~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~-~~~~  349 (373)
T 3frk_A          281 VWYTFVIRSEK----------RDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPI-WYGM  349 (373)
T ss_dssp             CCSSEEEEESS----------HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECC-CTTC
T ss_pred             eeEEEEEEeCC----------HHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccC-CCCC
Confidence            11222222211          4567788888886432111  000                     115799999 5999


Q ss_pred             cHHHHHHHHHHHHHHHH
Q 010842          475 DERHVVAAWELIMEGAD  491 (499)
Q Consensus       475 t~~di~~l~~~l~~~~~  491 (499)
                      |++||++++++|++...
T Consensus       350 t~~di~~~~~~l~~~~~  366 (373)
T 3frk_A          350 KNEEIEYVIDKINAWKL  366 (373)
T ss_dssp             CHHHHHHHHHHHHTCC-
T ss_pred             CHHHHHHHHHHHHHHhh
Confidence            99999999999987644

>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}

Probab=99.92  E-value=2.4e-23  Score=226.00  Aligned_cols=313  Identities=14%  Similarity=0.103  Sum_probs=211.9

Q ss_pred             HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCC
Q 010842          133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSP  212 (499)
Q Consensus       133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~  212 (499)
                      +..+.+++++|.+..        .++++|+|+||..++.+...           ++..|+++...|.|+..++...|+  
T Consensus       209 ~~ee~la~l~G~d~~--------i~~~~Gtt~a~~~~i~al~~-----------~GD~Vlv~~~~h~s~~~~~~~~G~--  267 (755)
T 2vyc_A          209 ESEKYAARVFGADRS--------WSVVVGTSGSNRTIMQACMT-----------DNDVVVVDRNCHKSIEQGLMLTGA--  267 (755)
T ss_dssp             HHHHHHHHHHTCSEE--------EEESSHHHHHHHHHHHHHCC-----------TTCEEEEESSCCHHHHHHHHHHCC--
T ss_pred             HHHHHHHHHhCCCce--------EEECCcHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHHHHHHHcCC--
Confidence            344669999998754        26777777888888877632           567899999999999999999999  


Q ss_pred             CCeEEeeCCCCCCC----cc-----CHHHHHHHHHHH--HH--cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842          213 ANIRALPTSVDANF----SL-----SPQLLRRAVEAD--VE--AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV  279 (499)
Q Consensus       213 ~~v~~v~~~~~~~~----~~-----d~~~L~~~i~~~--~~--~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l  279 (499)
                       .++.++.+.+ +|    .+     |+++|+++|++.  ++  .+.+|.+|+++++ |++|.+.|+++|+++|++||+++
T Consensus       268 -~~v~v~~~~~-~~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~l  344 (755)
T 2vyc_A          268 -KPVYMVPSRN-RYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRL  344 (755)
T ss_dssp             -EEEEECCCBC-TTSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEE
T ss_pred             -EEEEEeCCCC-ccccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEE
Confidence             9999988643 22    35     999999999863  22  4556667888887 68999999999999999999999


Q ss_pred             EeeccccchhccCccchhhhcCCCC--Cce------eEecccccccCCCcceEEEEeCc--hhHHHhhcCCccCCCCCCC
Q 010842          280 HVDAAYAGSACICPEFRHYLNGIER--VDS------FSFSPHKWLLSYLDCCCLWVKQP--GLLVKALSTDPEYLKNKPS  349 (499)
Q Consensus       280 hvD~A~g~~~~~~~~~~~~~~g~~~--aDs------i~~~~hK~l~~p~~~g~l~~r~~--~~l~~~~~~~~~yl~~~~~  349 (499)
                      |||+||+++..+.+.++... .+..  +|+      ++.++||++++|.++|++++++.  ..-...+......+     
T Consensus       345 ivDeA~~~~~~~~~~~~~~~-~~~g~~aD~~~~~~iv~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~~-----  418 (755)
T 2vyc_A          345 HFDEAWYGYARFNPIYADHY-AMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMH-----  418 (755)
T ss_dssp             EEECTTCTTGGGCGGGTTSS-SSCSCCCCCSSBEEEEEEETTTSSSCCTTCEEEEEECCBTCCCHHHHHHHHHHT-----
T ss_pred             EEECcCchhcccCcccCCcc-hhcCCcCCccCCCeEEEECccccccCcCCeeeeeecCcccccCHHHHHHHHHHh-----
Confidence            99999987654444332111 1123  676      99999999999988999999875  11000010000000     


Q ss_pred             CCCCcccCCCcccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC---------eEEEcCCCc-
Q 010842          350 ESNSVVDFKDWQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR---------FEIVVPRHF-  417 (499)
Q Consensus       350 ~~~~~~~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~---------~~~~~~~~~-  417 (499)
                                   +.+.+.  ....+-++++.+..+|.++++++..++++++++.|+++++         ++++.+... 
T Consensus       419 -------------~s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~  485 (755)
T 2vyc_A          419 -------------ATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVT  485 (755)
T ss_dssp             -------------SCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEE
T ss_pred             -------------CCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeeccCchhcc
Confidence                         111111  1234445666665565678899999999999999998877         777654311 


Q ss_pred             ------------------------------------------------eEEEEEecCCCCCCc-chhHHHHHHHHHHHHh
Q 010842          418 ------------------------------------------------ALVCFRLNPYPHSGS-ADTEMLNRKLLDWVNS  448 (499)
Q Consensus       418 ------------------------------------------------~~v~f~~~~~~~~~~-~~~~~~~~~l~~~l~~  448 (499)
                                                                      ..++|...+.+..+. .+.......+.+.|.+
T Consensus       486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~  565 (755)
T 2vyc_A          486 DPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGR  565 (755)
T ss_dssp             CTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHT
T ss_pred             ccccccccccccccchhccchhhhhccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHH
Confidence                                                            244555542110000 0000112455566666


Q ss_pred             cCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          449 TGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       449 ~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .|+.. ..   .+.+.+|+++ ++.+|++++++++++|.++.+..
T Consensus       566 ~gI~~-e~---~~~~~v~~~~-~~g~t~~~~~~l~~al~~~~~~~  605 (755)
T 2vyc_A          566 HGIVP-TR---TTDFQIMFLF-SMGVTRGKWGTLVNTLCSFKRHY  605 (755)
T ss_dssp             TTCCC-SE---ECSSEEEEEC-CTTCCTTTTHHHHHHHHHHHHHH
T ss_pred             CCCEE-ee---cCCCeEEEEE-CCCCCHHHHHHHHHHHHHHHHhh
Confidence            67432 11   2446689988 58899999999999999997655

>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*

Probab=99.92  E-value=1.3e-22  Score=207.67  Aligned_cols=323  Identities=11%  Similarity=0.047  Sum_probs=219.7

Q ss_pred             ccccChhhHHHHHHHHHHHHHHcCCC----CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCC
Q 010842          120 NWLASPASTELEIVVMDWLATMLKLP----KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSD  195 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l~g~~----~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~  195 (499)
                      .|....+..++++++.+|+.+.+|.+    .+       ..++++|+|+++..++.+..+           ++..|+++.
T Consensus        78 ~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~-------~i~~~~G~~~ai~~~~~~~~~-----------~gd~Vl~~~  139 (428)
T 1iay_A           78 NFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPE-------RVVMAGGATGANETIIFCLAD-----------PGDAFLVPS  139 (428)
T ss_dssp             HCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTT-------SCEEEEHHHHHHHHHHHHHCC-----------TTCEEEEES
T ss_pred             CCCCCCCcHHHHHHHHHHHHHhcCCCCCCChh-------hEEEccChHHHHHHHHHHhCC-----------CCCeEEEcc
Confidence            34433457899999999999888843    32       358999999999888877642           456788899


Q ss_pred             CCchhHHHHH-HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHH
Q 010842          196 QTHSTFAKVC-KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEV  271 (499)
Q Consensus       196 ~~H~s~~ka~-~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~i  271 (499)
                      .+|.++...+ ...|+   +++.+|.+.+++|.+|+++|++++++....+..+.+|+++.++|++|.+.|   +++|+++
T Consensus       140 p~y~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~  216 (428)
T 1iay_A          140 PYYPAFNRDLRWRTGV---QLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSF  216 (428)
T ss_dssp             SCCTTHHHHTTTTTCC---EEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred             CCCcchHHHHHHhcCC---EEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHH
Confidence            9999988755 46788   899999875445789999999999876555555677888999999999999   9999999


Q ss_pred             HHHhCCEEEeeccccchhccCccc---hhhhcC----CCCCc--eeEecccccccCC-CcceEEEEeCchhHHHhhcCCc
Q 010842          272 ANEYGIWVHVDAAYAGSACICPEF---RHYLNG----IERVD--SFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDP  341 (499)
Q Consensus       272 a~~~~~~lhvD~A~g~~~~~~~~~---~~~~~g----~~~aD--si~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~  341 (499)
                      |++||+++++|++|+++.+.....   ......    --..|  .++.+.||+++.| ..+|+++..++... +.+....
T Consensus       217 ~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~-~~~~~~~  295 (428)
T 1iay_A          217 TNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVV-NCARKMS  295 (428)
T ss_dssp             HHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHH-HHHHHHH
T ss_pred             HHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHH-HHHHHHH
Confidence            999999999999998854321111   111111    00157  6789999999754 45799888655433 2221110


Q ss_pred             cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC
Q 010842          342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-----LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH  416 (499)
Q Consensus       342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~  416 (499)
                      .+.                      ....+...++...+..     +.+++..++..++++++.+.|+++ +++++.+..
T Consensus       296 ~~~----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~  352 (428)
T 1iay_A          296 SFG----------------------LVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVV-GIKCLKNNA  352 (428)
T ss_dssp             TTS----------------------CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBCCCSS
T ss_pred             hcc----------------------cCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcccCCCe
Confidence            000                      0123344444444422     256777888889999999999988 777654334


Q ss_pred             ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      .+.+++++....  ... ......++.++|.++ |+.+..+..+.  +..++|+++.  ..+++++++++++|+++.++
T Consensus       353 g~~~~~~~~~~~--~~~-~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~--~~~~e~i~~~~~~l~~~l~~  426 (428)
T 1iay_A          353 GLFCWMDLRPLL--RES-TFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA--NMDDGTVDIALARIRRFVGV  426 (428)
T ss_dssp             SSEEEEECGGGC--SSS-SHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS--SSCHHHHHHHHHHHHHHHHT
T ss_pred             eEEEEEechhhc--CCC-chhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe--cCCHHHHHHHHHHHHHHHhc
Confidence            556667764311  000 012345678888876 75544433332  2468999995  37999999999999987653

>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*

Probab=99.92  E-value=3.7e-24  Score=222.39  Aligned_cols=326  Identities=13%  Similarity=0.066  Sum_probs=205.8

Q ss_pred             cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh
Q 010842          121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST  200 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s  200 (499)
                      |..++...++|+.+++++++++|.+.+.+    ...+++++|++||+.++.+..+           ++..|+++...|.+
T Consensus        82 y~~~~~~~~le~~~~~~~a~~~g~~~~~~----~~~V~~~sGs~an~~~~~all~-----------pGD~Vl~~~~~~~~  146 (483)
T 1rv3_A           82 YGGTEHIDELETLCQKRALQAYGLDPQCW----GVNVQPYSGSPANFAVYTALVE-----------PHGRIMGLDLPDGG  146 (483)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHTTCCTTTE----EEECCCSSHHHHHHHHHHHHTC-----------TTCEEEEECGGGTC
T ss_pred             cCcchhHHHHHHHHHHHHHHHhCCCcccC----ceEEEECCcHHHHHHHHHHhcC-----------CCCEEEEecCccCc
Confidence            45566778999999999999999974310    0125556666888777765532           57788888888876


Q ss_pred             HHH--------HHHHhCCCCCCeEEeeC--CCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHH
Q 010842          201 FAK--------VCKLAGVSPANIRALPT--SVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAE  270 (499)
Q Consensus       201 ~~k--------a~~~~G~g~~~v~~v~~--~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~  270 (499)
                      +..        .+...|.   .++.+++  +++ ++.+|+++|++++++.     +|.+|++ ++++++ .+.|+++|++
T Consensus       147 ~~~~~~~~~~~~v~~~G~---~~~~v~~~~~~~-~~~iD~d~le~~i~~~-----~tklIi~-~~sn~~-~~~dl~~i~~  215 (483)
T 1rv3_A          147 HLTHGFMTDKKKISATSI---FFESMAYKVNPD-TGYIDYDRLEENARLF-----HPKLIIA-GTSCYS-RNLDYGRLRK  215 (483)
T ss_dssp             CGGGCCBCSSCBCSHHHH---HSEEEEECBCTT-TCSBCHHHHHHHHHHH-----CCSEEEE-CCSSCC-SCCCHHHHHH
T ss_pred             CcchhhhhcccCcccccc---eEEEEECccccC-CCcCCHHHHHHHHhhc-----CCcEEEE-eCCcCC-CcCCHHHHHH
Confidence            543        2334443   2455554  533 4799999999999742     1336666 666666 8899999999


Q ss_pred             HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchh-HHHhhcCCccCCCCCCC
Q 010842          271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGL-LVKALSTDPEYLKNKPS  349 (499)
Q Consensus       271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~-l~~~~~~~~~yl~~~~~  349 (499)
                      +|+++|+++|+|+||+.+....+.....+   ..+|++++++||++.+|.+ |+++++++.. +...-.....|  .   
T Consensus       216 ia~~~g~~livD~ah~~g~~~~~~~~~p~---~~~div~~s~~K~l~Gprg-G~i~~~~~~~~~~~~~g~~~~y--~---  286 (483)
T 1rv3_A          216 IADENGAYLMADMAHISGLVVAGVVPSPF---EHCHVVTTTTHKTLRGCRA-GMIFYRRGVRSVDPKTGKEILY--N---  286 (483)
T ss_dssp             HHHHTTCEEEEECTTTHHHHHHTSSCCGG---GTCSEEEEESSGGGCCCSC-EEEEEECSBCC-------CCBC--C---
T ss_pred             HHHHcCCEEEEEccchhcccccCCCCCCC---CCCcEEEecCcccCCCCCc-eEEEEcchhhhhccccCcchhh--H---
Confidence            99999999999999875543322211111   2589999999999988987 9999987521 00000000000  0   


Q ss_pred             CCCCcccCC-CcccCCCCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-CceEEEEEecC
Q 010842          350 ESNSVVDFK-DWQVGTGRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-HFALVCFRLNP  426 (499)
Q Consensus       350 ~~~~~~~~~-~~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-~~~~v~f~~~~  426 (499)
                       .....+.. ....+++.... ...+..++......+++++.++..++++++.+.|++. +++++.+. ....+.+.+.+
T Consensus       287 -~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~  364 (483)
T 1rv3_A          287 -LESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVEL-GYKIVTGGSDNHLILVDLRS  364 (483)
T ss_dssp             -HHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEGGG
T ss_pred             -HHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhc-CCEeccCCCCCceEEEeccC
Confidence             00000000 00011111111 2344556666656788999999999999999999988 89987542 22344444433


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhcCCEEEE---eee--ECCEEEEEEeccCCCCc----HHHHHHHHHHHHHHHHH
Q 010842          427 YPHSGSADTEMLNRKLLDWVNSTGRVYLT---HTI--VGGLYMLRFAVGASLTD----ERHVVAAWELIMEGADR  492 (499)
Q Consensus       427 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~~--~~g~~~lRi~~~~~~~t----~~di~~l~~~l~~~~~~  492 (499)
                      .+      .  ...++.+.|.+.|+.+..   +..  ..+..++|+++. ..+|    ++|++++++.|.++.+.
T Consensus       365 ~g------~--~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~-~~~t~g~~~edi~~~~~~l~~~l~~  430 (483)
T 1rv3_A          365 KG------T--DGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRLGTP-ALTSRGLLEKDFQKVAHFIHRGIEL  430 (483)
T ss_dssp             GT------C--CHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEEECH-HHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CC------C--CHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEeecC-CcccCCCCHHHHHHHHHHHHHHHHh
Confidence            11      0  033455666667754331   221  113467999995 5556    99999999999988765

>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*

Probab=99.91  E-value=2e-23  Score=209.85  Aligned_cols=312  Identities=11%  Similarity=0.087  Sum_probs=212.6

Q ss_pred             cCCcccccChhhHHHHHHHHHHHHHHc-CCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcC
Q 010842          116 SVGFNWLASPASTELEIVVMDWLATML-KLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGS  194 (499)
Q Consensus       116 ~~~~~~~~~p~~~~lE~~~~~~la~l~-g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s  194 (499)
                      .....|...++..+++++    +++++ +.+.+       ..++|+|||+|+..++.+..+           ++..|+++
T Consensus        54 ~~~~~y~~~~g~~~l~~~----la~~~~~~~~~-------~v~~~~g~~~a~~~~~~~l~~-----------~gd~Vl~~  111 (375)
T 3op7_A           54 GTKLNYGWIEGSPAFKKS----VSQLYTGVKPE-------QILQTNGATGANLLVLYSLIE-----------PGDHVISL  111 (375)
T ss_dssp             TSCCSSCCTTCCHHHHHH----HHTTSSSCCGG-------GEEEESHHHHHHHHHHHHHCC-----------TTCEEEEE
T ss_pred             cCCcCCCCCCChHHHHHH----HHHHhccCChh-------hEEEcCChHHHHHHHHHHhcC-----------CCCEEEEe
Confidence            334456556667788888    55555 34433       469999999999988876632           56678889


Q ss_pred             CCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHH
Q 010842          195 DQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEV  271 (499)
Q Consensus       195 ~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~i  271 (499)
                      ..+|.++..+++..|.   +++.+|++.+++|.+|+++|+++++++      +.+|+++.++|++|.+-|   +++|+++
T Consensus       112 ~~~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~l~~i~~l  182 (375)
T 3op7_A          112 YPTYQQLYDIPKSLGA---EVDLWQIEEENGWLPDLEKLRQLIRPT------TKMICINNANNPTGAVMDRTYLEELVEI  182 (375)
T ss_dssp             ESSCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHHHCCTT------CCEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred             CCCchhHHHHHHHcCC---EEEEEeccccCCCCCCHHHHHHhhccC------CeEEEEcCCCCCCCCCCCHHHHHHHHHH
Confidence            9999999999999999   999999885555789999999998643      337788899999999999   9999999


Q ss_pred             HHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCC
Q 010842          272 ANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSE  350 (499)
Q Consensus       272 a~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~  350 (499)
                      |++||+++++|++|+.+...  ...... .....+.+..+.+|+++.| ..+|+++. +++.. +.+.....+..     
T Consensus       183 a~~~~~~li~De~~~~~~~~--~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~v~~-~~~l~-~~~~~~~~~~~-----  252 (375)
T 3op7_A          183 ASEVGAYILSDEVYRSFSEL--DVPSII-EVYDKGIAVNSLSKTYSLPGIRIGWVAA-NHQVT-DILRDYRDYTM-----  252 (375)
T ss_dssp             HHTTTCEEEEECCSCCCSSS--CCCCHH-HHCTTEEEEEESSSSSSCGGGCCEEEEC-CHHHH-HHHTTTGGGTT-----
T ss_pred             HHHcCCEEEEEccccccccc--CCCchh-hhcCCEEEEeEChhhcCCcccceEEEEe-CHHHH-HHHHHHHhhhc-----
Confidence            99999999999999875432  111111 1112457788899999744 55788877 44333 33322211110     


Q ss_pred             CCCcccCCCcccCCCCCCCcHHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCC
Q 010842          351 SNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYP  428 (499)
Q Consensus       351 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~  428 (499)
                                     .....+..+++...+.  .+.+++..++..++++++.+.|++.|++++..+.....+.+.+....
T Consensus       253 ---------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  317 (375)
T 3op7_A          253 ---------------ICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDM  317 (375)
T ss_dssp             ---------------SCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSS
T ss_pred             ---------------cCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCC
Confidence                           0112333333333332  34456666777888999999999988998765444334444443211


Q ss_pred             CCCcchhHHHHHHHHHHH-HhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          429 HSGSADTEMLNRKLLDWV-NSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       429 ~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                               ...++.+++ .+.|+.+..+..+....++|++++   .+.++|++++++|.++.+++.+
T Consensus       318 ---------~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~~---~~~~~i~~~l~~l~~~l~~~~~  373 (375)
T 3op7_A          318 ---------PMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGFA---CEQETLIKGLEKLSQFLRRFDK  373 (375)
T ss_dssp             ---------CHHHHHHHHHHHHCEECEEGGGGTCTTEEEECCC---SCHHHHHHHHHHHHHHHGGGC-
T ss_pred             ---------CHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHHhh
Confidence                     134566666 466865544444444578999986   3458999999999998876643

>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}

Probab=99.91  E-value=6.7e-24  Score=213.14  Aligned_cols=321  Identities=14%  Similarity=0.099  Sum_probs=214.5

Q ss_pred             HHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc
Q 010842          106 LGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN  185 (499)
Q Consensus       106 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g  185 (499)
                      +.+.+...+...  .|...+...+++++    +++++|.+.         .++++|||+|+..++.+++-.         
T Consensus        21 ~~~~~~~~~~~~--~~~~~~~~~~l~~~----la~~~~~~~---------~~~~~~gt~a~~~~~~~~~~~---------   76 (374)
T 3uwc_A           21 YLNDLREFIKTA--DFTLGAELEKFEKR----FAALHNAPH---------AIGVGTGTDALAMSFKMLNIG---------   76 (374)
T ss_dssp             HHHHHHHHHHHT--CCSSCHHHHHHHHH----HHHHTTCSE---------EEEESCHHHHHHHHHHHTTCC---------
T ss_pred             HHHHHHHHHHcC--CcccChhHHHHHHH----HHHHhCCCc---------EEEeCCHHHHHHHHHHHcCCC---------
Confidence            555555555432  34456666666666    888888763         489999999998888766211         


Q ss_pred             cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCCh
Q 010842          186 MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNV  265 (499)
Q Consensus       186 ~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l  265 (499)
                       ++..|+++..+|.++..+++..|+   +++.+|++.  ++.+|+++|+++++++      +.+|+   ++|++|.+.|+
T Consensus        77 -~gd~v~~~~~~~~~~~~~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~~~~~------~~~v~---~~n~~G~~~~~  141 (374)
T 3uwc_A           77 -AGDEVITCANTFIASVGAIVQAGA---TPVLVDSEN--GYVIDPEKIEAAITDK------TKAIM---PVHYTGNIADM  141 (374)
T ss_dssp             -TTCEEEEESSSCHHHHHHHHHTTC---EEEEECBCT--TSSBCGGGTGGGCCTT------EEEEC---CBCGGGCCCCH
T ss_pred             -CCCEEEECCCccHHHHHHHHHcCC---EEEEEecCC--CCCcCHHHHHHhCCCC------ceEEE---EeCCcCCcCCH
Confidence             466789999999999999999999   999999873  4699999999988653      22444   77899999999


Q ss_pred             hHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccc--ccccCCCcceEEEEeCchhHHHhhcCCccC
Q 010842          266 EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPH--KWLLSYLDCCCLWVKQPGLLVKALSTDPEY  343 (499)
Q Consensus       266 ~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~h--K~l~~p~~~g~l~~r~~~~l~~~~~~~~~y  343 (499)
                      ++|+++|++||+++|+|++|+.+........    + ..+|.+++++|  |+++.+..+|+++.+++.............
T Consensus       142 ~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~----~-~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~  216 (374)
T 3uwc_A          142 PALAKIAKKHNLHIVEDACQTILGRINDKFV----G-SWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHG  216 (374)
T ss_dssp             HHHHHHHHHTTCEEEEECTTCTTCEETTEET----T-SSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTT
T ss_pred             HHHHHHHHHcCCEEEEeCCCccCceeCCeec----c-ccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcC
Confidence            9999999999999999999986543221111    1 12699999977  999864457777777654332111111000


Q ss_pred             CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEEcCCCc---eE
Q 010842          344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR-FEIVVPRHF---AL  419 (499)
Q Consensus       344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~~~~~~---~~  419 (499)
                      ...         .+.  ....+..+....+.+++.....++++++.++..++++++.+.|+++++ +++...+..   ..
T Consensus       217 ~~~---------~~~--~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~  285 (374)
T 3uwc_A          217 LIN---------RDV--CVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRREGVYHVF  285 (374)
T ss_dssp             EEE---------TTE--ESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCCTTEECCC
T ss_pred             ccc---------cCc--cccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCCCCCceee
Confidence            000         000  001112223334444554445577888999999999999999999988 887543321   11


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee--eE------C---------------CEEEEEEeccCCCCcH
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT--IV------G---------------GLYMLRFAVGASLTDE  476 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~------~---------------g~~~lRi~~~~~~~t~  476 (499)
                      +.|......          ..++.+.|.++|+.+....  ..      .               ....+|+++ ++.+|+
T Consensus       286 ~~~~~~~~~----------~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~-~~~~t~  354 (374)
T 3uwc_A          286 HIYVLRVKY----------RDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPA-HPYLTE  354 (374)
T ss_dssp             SSEEEEETT----------HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECC-CTTSCH
T ss_pred             EEEEEEcCC----------HHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccC-CCCCCH
Confidence            122222111          4567777888886432221  00      0               126799998 588999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010842          477 RHVVAAWELIMEGADR  492 (499)
Q Consensus       477 ~di~~l~~~l~~~~~~  492 (499)
                      +||++++++|+++.++
T Consensus       355 edi~~~~~~l~~~l~~  370 (374)
T 3uwc_A          355 EEINYIIKKVREFYLE  370 (374)
T ss_dssp             HHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999998754

>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}

Probab=99.91  E-value=1.8e-22  Score=210.70  Aligned_cols=330  Identities=12%  Similarity=0.052  Sum_probs=223.1

Q ss_pred             CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC
Q 010842          118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT  197 (499)
Q Consensus       118 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~  197 (499)
                      ...|..+++...+++++.+|+.+..|.+...     ...++|+|+|+|+..++.+....          ++..|+++.++
T Consensus       127 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~~~al~~~~~~l~~~----------~gd~Vlv~~p~  191 (500)
T 3tcm_A          127 TGAYSHSQGIHGLRDAIASGIASRDGFPANA-----DDIFLTDGASPGVHLMMQLLIRN----------EKDGILVPIPQ  191 (500)
T ss_dssp             SSSCCCTTCCHHHHHHHHHHHHHHHSSCCCG-----GGEEEESSSHHHHHHHHHHHCCS----------TTEEEEEEESC
T ss_pred             CCCcCCCcChHHHHHHHHHHHHhhcCCCCCc-----ccEEEcCCHHHHHHHHHHHHcCC----------CCCEEEEeCCC
Confidence            4577788888999999999999988865321     25699999999998888765311          56789999999


Q ss_pred             chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHH
Q 010842          198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANE  274 (499)
Q Consensus       198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~  274 (499)
                      |.++..+++..|.   +++.+|++++++|.+|+++|+++|++..+.+..+.+|+++.++||||.+   +++++|+++|++
T Consensus       192 y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~  268 (500)
T 3tcm_A          192 YPLYSASIALHGG---ALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKN  268 (500)
T ss_dssp             CTHHHHHHHHTTC---EEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             cHhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHH
Confidence            9999999999999   9999999987678999999999999877667677788888999999999   457778888999


Q ss_pred             hCCEEEeeccccchhccCc----cchhhhcCC----CCCcee-Eecccccc-cCC-CcceEEEEe--CchhHHHhhcCCc
Q 010842          275 YGIWVHVDAAYAGSACICP----EFRHYLNGI----ERVDSF-SFSPHKWL-LSY-LDCCCLWVK--QPGLLVKALSTDP  341 (499)
Q Consensus       275 ~~~~lhvD~A~g~~~~~~~----~~~~~~~g~----~~aDsi-~~~~hK~l-~~p-~~~g~l~~r--~~~~l~~~~~~~~  341 (499)
                      ||+++++|++|+.+.+...    ........+    .....+ ..+.+|.+ +.| ..+|++.+.  ++... +.+....
T Consensus       269 ~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~-~~l~~~~  347 (500)
T 3tcm_A          269 EGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVR-EQIYKIA  347 (500)
T ss_dssp             HTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHH-HHHHHHH
T ss_pred             cCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHH-HHHHHHH
Confidence            9999999999987644211    111111111    122333 45889998 333 457888763  33332 2221100


Q ss_pred             cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc------------HHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 010842          342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG------------VLNLQSHIRSDIRLAKMFEGFVKSDPRF  409 (499)
Q Consensus       342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g------------~~g~~~~~~~~~~~a~~l~~~L~~~~~~  409 (499)
                      ....                  ++   ..+..+++...+.            .+..+++.++..++++++.+.|+++|++
T Consensus       348 ~~~~------------------~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~  406 (500)
T 3tcm_A          348 SVNL------------------CS---NITGQILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGI  406 (500)
T ss_dssp             HTTC------------------CC---CHHHHHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTE
T ss_pred             hccc------------------CC---CHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence            0000                  00   1222232222221            1345666777888999999999999999


Q ss_pred             EEEcCCCceEEEE-EecCCCCCCcchhHH-------HHHHH-HHHHHhcCCEEEEeeeE---CCEEEEEEeccCCCCcHH
Q 010842          410 EIVVPRHFALVCF-RLNPYPHSGSADTEM-------LNRKL-LDWVNSTGRVYLTHTIV---GGLYMLRFAVGASLTDER  477 (499)
Q Consensus       410 ~~~~~~~~~~v~f-~~~~~~~~~~~~~~~-------~~~~l-~~~l~~~g~~~~~~~~~---~g~~~lRi~~~~~~~t~~  477 (499)
                      ++. +|+.+++.| ++..+.    ..++.       ....+ .+.|.+.|+.+..+..+   .+..++|++++   ++++
T Consensus       407 ~~~-~~~g~~~~~~~~~lp~----~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~---~~~e  478 (500)
T 3tcm_A          407 TCN-EAEGAMYVFPQICLPQ----KAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTIL---PQED  478 (500)
T ss_dssp             ECC-CCCBTTEECCEECCCH----HHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESC---SCTT
T ss_pred             EEe-cCCeEEEEeeeecCch----hhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEEC---CCHH
Confidence            876 455555544 232110    00000       01222 34455568655544333   34568999996   7889


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q 010842          478 HVVAAWELIMEGADRLFK  495 (499)
Q Consensus       478 di~~l~~~l~~~~~~l~~  495 (499)
                      +|++++++|.++.+++.+
T Consensus       479 ~i~~~i~~l~~~~~~~~~  496 (500)
T 3tcm_A          479 KIPAVISRFTVFHEAFMS  496 (500)
T ss_dssp             THHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999887754

>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.91  E-value=9.4e-24  Score=209.85  Aligned_cols=335  Identities=12%  Similarity=0.038  Sum_probs=219.9

Q ss_pred             cccccCCCCCChHHHHHHHHHHHcc---cC-Cccc---ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEE-cCCh
Q 010842           91 NFFAFFPATVSTAGFLGEMLCACFN---SV-GFNW---LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVI-QNTT  162 (499)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~~n---~~-~~~~---~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~gg  162 (499)
                      +.+.|.|++...|..+.+.+...+.   .| ...+   ..++.+.++-+++++.+++++|.++..      ..+| |+||
T Consensus         5 ~~~~f~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~------~v~f~t~~~   78 (361)
T 3m5u_A            5 RKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDY------EVLFLQGGA   78 (361)
T ss_dssp             CCEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTE------EEEEESSHH
T ss_pred             ceEeecCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCcH
Confidence            4456777777776666666665442   12 1111   125566777788899999999996431      3477 9999


Q ss_pred             HHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH
Q 010842          163 SDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE  242 (499)
Q Consensus       163 t~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~  242 (499)
                      |+|+-+++.... .        |....+|+.+..+|.++ +.++..|+   ++..+++++++.+.++++. +  |+++++
T Consensus        79 T~a~n~~~~~~~-~--------~~~~~~i~~~~~~~~~~-~~a~~~G~---~v~~~~~~~~g~~~~~~~~-~--l~~~t~  142 (361)
T 3m5u_A           79 SLQFAMIPMNLA-L--------NGVCEYANTGVWTKKAI-KEAQILGV---NVKTVASSEESNFDHIPRV-E--FSDNAD  142 (361)
T ss_dssp             HHHHHHHHHHHC-C--------SSCEEEEECSHHHHHHH-HHHHHTTC---CEEEEEECTTTTSCSCCCC-C--CCTTSS
T ss_pred             HHHHHHHHHhcC-C--------CCeEEEEeCCHHHHHHH-HHHHHcCC---ceEEEecccCcCCCcCChh-h--cCCCCC
Confidence            999887776542 1        11223455555555433 44566788   9999999876523256665 3  655443


Q ss_pred             cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842          243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC  322 (499)
Q Consensus       243 ~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~  322 (499)
                            +|.+++.+|.+|.+.|.     +++ +|+++|||++++.+....+        +...|.+++++|||++ |.|+
T Consensus       143 ------lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id--------~~~~d~~~~s~~K~~g-p~G~  201 (361)
T 3m5u_A          143 ------YAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVD--------FSNIALFYGGVQKNAG-ISGL  201 (361)
T ss_dssp             ------EEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCC--------CTTEEEEEEETTTTSS-CTTC
T ss_pred             ------EEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCC--------cccCCEEEEechhccC-CCcc
Confidence                  78889999999998552     334 4999999999987755433        2237999999999996 9999


Q ss_pred             eEEEEeCchhHHHhhc-CCccCCCCCCCCCCCcccCCCcccCCCCCC-----CcHHHHHHHHHhcHH-HHHHHHHHHHHH
Q 010842          323 CCLWVKQPGLLVKALS-TDPEYLKNKPSESNSVVDFKDWQVGTGRRF-----KSLRLWMVLRSYGVL-NLQSHIRSDIRL  395 (499)
Q Consensus       323 g~l~~r~~~~l~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-----~al~~~~~l~~~g~~-g~~~~~~~~~~~  395 (499)
                      |++++|++.. .+... ..+.|+....           ..-...+.+     ....+..+++.+-.. |++++.++..++
T Consensus       202 g~l~~~~~~~-~~~~~~~~p~~~~~~~-----------~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l  269 (361)
T 3m5u_A          202 SCIFIRKDML-ERSKNKQIPSMLNYLT-----------HAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQK  269 (361)
T ss_dssp             EEEEEEHHHH-HHHHTCCCCGGGCHHH-----------HHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred             EEEEEcHHHH-hhhcCCCCCceeehHH-----------HhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence            9999987542 22211 2233321100           000011111     124556667766666 799999999999


Q ss_pred             HHHHHHHHhcCCCe-EEEcCC--C-ceEEEEEecC-CCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEecc
Q 010842          396 AKMFEGFVKSDPRF-EIVVPR--H-FALVCFRLNP-YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVG  470 (499)
Q Consensus       396 a~~l~~~L~~~~~~-~~~~~~--~-~~~v~f~~~~-~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~  470 (499)
                      ++++++.|++++++ +++.++  . ..+++|.+.+ ..      .+   ..+...|.++|+....+  ......+|++++
T Consensus       270 ~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~~~~~~------~~---~~~~~~L~~~gI~~~~g--~~~~g~iRiS~~  338 (361)
T 3m5u_A          270 ATMLYECIDLSNGFYKGHADKKDRSLMNVSFNIAKNKD------LE---PLFVKEAEEAGMIGLKG--HRILGGIRASIY  338 (361)
T ss_dssp             HHHHHHHHHTSTTSEEESSCGGGBCSSEEEEEESSCTT------HH---HHHHHHHHHTTEECCBC--CTTTCSEEEECC
T ss_pred             HHHHHHHHHHCCCeeeccCCHHHcCCeEEEEECCCchh------hh---HHHHHHHHHCCCEEecC--CCccCeEEEEcc
Confidence            99999999999876 654332  2 3578898864 21      12   35667777788543222  112245999996


Q ss_pred             CCCCcHHHHHHHHHHHHHHHHH
Q 010842          471 ASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       471 ~~~~t~~di~~l~~~l~~~~~~  492 (499)
                       ..+|++|||+++++|+++.++
T Consensus       339 -~~~t~edId~l~~al~~~~~~  359 (361)
T 3m5u_A          339 -NALNLDQVKTLCEFMKEFQGK  359 (361)
T ss_dssp             -TTSCHHHHHHHHHHHHHHHHH
T ss_pred             -CCCCHHHHHHHHHHHHHHHHh
Confidence             779999999999999998765

>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*

Probab=99.91  E-value=3.1e-23  Score=209.41  Aligned_cols=325  Identities=14%  Similarity=0.089  Sum_probs=217.6

Q ss_pred             HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842          105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE  184 (499)
Q Consensus       105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~  184 (499)
                      .+.+.+...+......|....+..++++++.+|+.+.+|.+.+.     ...++|+|||+|+..++.+..+         
T Consensus        48 ~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~g~~~al~~~~~~l~~---------  113 (385)
T 1b5p_A           48 HVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTP-----EETIVTVGGSQALFNLFQAILD---------  113 (385)
T ss_dssp             HHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCG-----GGEEEESHHHHHHHHHHHHHCC---------
T ss_pred             HHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----HHEEEcCChHHHHHHHHHHhcC---------
Confidence            34444444443323345555567899999999999888864211     1468999999999888876532         


Q ss_pred             ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842          185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN  264 (499)
Q Consensus       185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~  264 (499)
                        ++..|+++.++|..+..+++..|.   +++.+|++++++|.+|+++|+++++++      +.+|+.+.++||||.+-+
T Consensus       114 --~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~NPtG~~~~  182 (385)
T 1b5p_A          114 --PGDEVIVLSPYWVSYPEMVRFAGG---VVVEVETLPEEGFVPDPERVRRAITPR------TKALVVNSPNNPTGAVYP  182 (385)
T ss_dssp             --TTCEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGGTTCCCHHHHHTTCCTT------EEEEEEESSCTTTCCCCC
T ss_pred             --CCCEEEEcCCCchhHHHHHHHcCC---EEEEeecCcccCCCCCHHHHHHhcCCC------CEEEEEeCCCCCCCCCcC
Confidence              466788899999999999999999   999999985335789999999988643      347888899999999855


Q ss_pred             ---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCC-CCceeEecccccccCC-CcceEEEEeCchhHHHhhcC
Q 010842          265 ---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE-RVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST  339 (499)
Q Consensus       265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~  339 (499)
                         +++|+++|++||+++++|++|+.+.... .... +..+. ..+.+..+++|+++.| ..+|+++.++. .. +.+..
T Consensus       183 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~-~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~-~~-~~l~~  258 (385)
T 1b5p_A          183 KEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFS-PGRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE-VI-KAMAS  258 (385)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCC-GGGTCTTTEEEEEESTTTTTCGGGCCEEEECCHH-HH-HHHHH
T ss_pred             HHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCC-HHHcCCCCEEEEEechhhcCCcccceEEEEeCHH-HH-HHHHH
Confidence               8999999999999999999998754311 1111 11111 3467788999999755 34888887542 22 22211


Q ss_pred             CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-----cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842          340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-----GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP  414 (499)
Q Consensus       340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~  414 (499)
                      ...+.                    +.....+..+++...+     +.+.+++..++..++++++.+.|+++ ++++..+
T Consensus       259 ~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~  317 (385)
T 1b5p_A          259 VSRQS--------------------TTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAVRP  317 (385)
T ss_dssp             HHHTT--------------------TCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCCC
T ss_pred             HHhhc--------------------cCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCeecCC
Confidence            00000                    0011233444443333     34557778888888899999999887 7776543


Q ss_pred             CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      .....+...+...+        ....++.+.|.++|+.+..+..+....++|++++   +++++|+++++.|.++.
T Consensus       318 ~~~~~~~~~~~~~~--------~~~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~---~~~~~i~~~l~~l~~~l  382 (385)
T 1b5p_A          318 SGAFYVLMDTSPIA--------PDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA---TSEENLRKALERFARVL  382 (385)
T ss_dssp             SBTTEEEEECTTTC--------SSHHHHHHHHHHTTEECEESGGGTCTTEEEEECC---SCHHHHHHHHHHGGGGC
T ss_pred             CeeEEEEEecCCCC--------CCHHHHHHHHHHCCeEEecccccCCCCeEEEEec---CCHHHHHHHHHHHHHHH
Confidence            33233344443111        0135677777777865544444432457999985   68889999999887654

>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}

Probab=99.91  E-value=1.1e-23  Score=214.51  Aligned_cols=334  Identities=13%  Similarity=0.085  Sum_probs=223.5

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCc-cEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTG-GGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      ..+.+.+...+......|...++..++++++.+|+.+.+|.+...     . ..++|+|||+|+..++.+..+       
T Consensus        41 ~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~-----~~~v~~t~g~~~al~~~~~~~~~-------  108 (411)
T 2o0r_A           41 PKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDP-----ETEVLVTVGATEAIAAAVLGLVE-------  108 (411)
T ss_dssp             HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCT-----TTSEEEEEHHHHHHHHHHHHHCC-------
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCC-----CceEEEeCCHHHHHHHHHHHhcC-------
Confidence            345555555554333456555667899999999999998864221     1 368999999999988877632       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCC-CCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVD-ANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                          ++..|+++..+|.++..+++..|.   +++.+|++.+ ++|.+|+++|+++++++      +.+|+++.++|++|.
T Consensus       109 ----~gd~Vl~~~~~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~l~~~------~~~v~l~~~~nptG~  175 (411)
T 2o0r_A          109 ----PGSEVLLIEPFYDSYSPVVAMAGA---HRVTVPLVPDGRGFALDADALRRAVTPR------TRALIINSPHNPTGA  175 (411)
T ss_dssp             ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEEETTEEECCHHHHHHHCCTT------EEEEEEESSCTTTCC
T ss_pred             ----CCCEEEEeCCCcHhHHHHHHHcCC---EEEEeeccccccCCCCCHHHHHHhhccC------ceEEEEeCCCCCCCC
Confidence                456788899999999999999999   9999998753 23679999999988642      447788899999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842          262 VDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK  335 (499)
Q Consensus       262 id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~  335 (499)
                      +-|   +++|+++|++||+++++|++|+++.+........  +.+....|.++.++||+++.| ..+|++++++ +.. +
T Consensus       176 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~-~  253 (411)
T 2o0r_A          176 VLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPA-ELI-A  253 (411)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCH-HHH-H
T ss_pred             CCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCH-HHH-H
Confidence            955   5999999999999999999998764321111111  111234789999999998744 3489988853 322 2


Q ss_pred             hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842          336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR  415 (499)
Q Consensus       336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~  415 (499)
                      .+.....+..              +   .........+..++.. +.+++++..++..++++++.+.|++. ++++..+.
T Consensus       254 ~l~~~~~~~~--------------~---~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~  314 (411)
T 2o0r_A          254 GVRAAKQYLS--------------Y---VGGAPFQPAVALALDT-EDAWVAALRNSLRARRDRLAAGLTEI-GFAVHDSY  314 (411)
T ss_dssp             HHHHHHHHHT--------------S---CCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHH-TCEECCCC
T ss_pred             HHHHHHhhcc--------------C---CCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHHc-CCEecCCC
Confidence            2211111100              0   0001111223333432 35678888889999999999999887 78876443


Q ss_pred             CceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeE-C------------CEEEEEEeccCCCCcHHHHHH
Q 010842          416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIV-G------------GLYMLRFAVGASLTDERHVVA  481 (499)
Q Consensus       416 ~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~-~------------g~~~lRi~~~~~~~t~~di~~  481 (499)
                      ....+++.+....   ..    ...++.++|. +.|+.+..+..+ .            +..++|+++.   .++++|++
T Consensus       315 ~g~~~~~~~~~~~---~~----~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~---~~~e~i~~  384 (411)
T 2o0r_A          315 GTYFLCADPRPLG---YD----DSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFC---KRDDTLDE  384 (411)
T ss_dssp             BSSEEEEECGGGT---CC----CHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECC---SCHHHHHH
T ss_pred             eeEEEEEecCCCC---CC----CHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEec---CCHHHHHH
Confidence            3335667765310   00    0345666665 457654443333 1            3468999985   37899999


Q ss_pred             HHHHHHHHHHHH
Q 010842          482 AWELIMEGADRL  493 (499)
Q Consensus       482 l~~~l~~~~~~l  493 (499)
                      ++++|.++.++.
T Consensus       385 ~~~~l~~~~~~~  396 (411)
T 2o0r_A          385 AIRRLSVLAERP  396 (411)
T ss_dssp             HHHHHGGGGC--
T ss_pred             HHHHHHHHHhcc
Confidence            999998865543

>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}

Probab=99.91  E-value=5.8e-23  Score=208.13  Aligned_cols=327  Identities=9%  Similarity=0.056  Sum_probs=219.7

Q ss_pred             HHHHHHHHHHcccC----CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh
Q 010842          104 GFLGEMLCACFNSV----GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD  179 (499)
Q Consensus       104 ~~~~~~l~~~~n~~----~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~  179 (499)
                      ..+.+.+...+...    ...|...++..++++++.+|+.+.+|.+...     ...++|+|||+|+..++.+..+    
T Consensus        51 ~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~-----~~i~~~~g~~~al~~~~~~l~~----  121 (398)
T 3ele_A           51 QIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNA-----DNLYMTMGAAASLSICFRALTS----  121 (398)
T ss_dssp             HHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHHCC----
T ss_pred             HHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCCh-----HHEEEccCHHHHHHHHHHHHcC----
Confidence            34445555444332    2345555667899999999999999864221     2469999999999988887632    


Q ss_pred             HhhhhccCC-eEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc
Q 010842          180 AVGAENMHK-LVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS  258 (499)
Q Consensus       180 ~~~~~g~~~-~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~  258 (499)
                             ++ ..|+++.++|.++...++..|.   +++.+|++++ ++.+|+++|+++++++      +.+|+++.++|+
T Consensus       122 -------~g~d~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~~p~np  184 (398)
T 3ele_A          122 -------DAYDEFITIAPYFPEYKVFVNAAGA---RLVEVPADTE-HFQIDFDALEERINAH------TRGVIINSPNNP  184 (398)
T ss_dssp             -------STTCEEEEESSCCTHHHHHHHHTTC---EEEEECCCTT-TSSCCHHHHHHTCCTT------EEEEEECSSCTT
T ss_pred             -------CCCCEEEEeCCCchhhHHHHHHcCC---EEEEEecCCc-CCcCCHHHHHHHhCcC------CCEEEEcCCCCC
Confidence                   45 6788899999999999999999   9999999865 4899999999988643      447888899999


Q ss_pred             ccccCC---hhHHHHHHHH------hCCEEEeeccccchhccCccchhhhcCCCCCceeEeccccccc-CCCcceEEEEe
Q 010842          259 TTAVDN---VEPLAEVANE------YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLL-SYLDCCCLWVK  328 (499)
Q Consensus       259 ~G~id~---l~~I~~ia~~------~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r  328 (499)
                      ||.+-|   +++|+++|++      ||+++++|++|+.+....... .........+.++.+.+|+++ .+..+|+++++
T Consensus       185 tG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~  263 (398)
T 3ele_A          185 SGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKV-PFVTKYYDNTLVCYSYSKSLSLPGERIGYVLVP  263 (398)
T ss_dssp             TCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCC-CCGGGTCSSEEEEEESTTTSSCTTTCCEEEECC
T ss_pred             CCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCc-CChHhhcCCeEEEEehhhcCCCccceeEEEEEc
Confidence            999977   7777789999      999999999998754321111 111122235678889999997 44678999887


Q ss_pred             Cchh----HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh
Q 010842          329 QPGL----LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVK  404 (499)
Q Consensus       329 ~~~~----l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~  404 (499)
                      +...    +...+........                   ......+..++....+....   ..++..++++++.+.|+
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~l~~~L~  321 (398)
T 3ele_A          264 DEVYDKAELYAAVCGAGRALG-------------------YVCAPSLFQKMIVKCQGATG---DINAYKENRDLLYEGLT  321 (398)
T ss_dssp             TTSTTHHHHHHHHHHHHHHTT-------------------CCCSCHHHHHHHTTCTTCCC---CHHHHHHHHHHHHHHHH
T ss_pred             chhhhHHHHHHHHHHHhhhcc-------------------ccCCCHHHHHHHHHHhcCHH---HHHHHHHHHHHHHHHHH
Confidence            6521    1111100000000                   00011233333333222111   34566677888888888


Q ss_pred             cCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHH
Q 010842          405 SDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWE  484 (499)
Q Consensus       405 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~  484 (499)
                      +. ++++..+.....+++.+....          ..++.+.|.++|+.+..+..+....++|++++   +++++|+++++
T Consensus       322 ~~-g~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~e~i~~~l~  387 (398)
T 3ele_A          322 RI-GYHCFKPDGAFYMFVKALEDD----------SNAFCEKAKEEDVLIVAADGFGCPGWVRISYC---VDREMIKHSMP  387 (398)
T ss_dssp             HH-TCCEECCSBSSEEEEECSSSC----------HHHHHHHHHTTTEECEESGGGTCTTEEEEECC---SCHHHHHHHHH
T ss_pred             Hc-CCeecCCCeeEEEEEEcCCCC----------HHHHHHHHHHCCEEEeCccccCCCCeEEEEec---CCHHHHHHHHH
Confidence            76 777764443333566654321          45677778788865544444444568999984   68999999999


Q ss_pred             HHHHHHHHH
Q 010842          485 LIMEGADRL  493 (499)
Q Consensus       485 ~l~~~~~~l  493 (499)
                      +|.++.+++
T Consensus       388 ~l~~~l~~~  396 (398)
T 3ele_A          388 AFEKIYKKY  396 (398)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHh
Confidence            999988765

>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*

Probab=99.91  E-value=3.9e-22  Score=205.41  Aligned_cols=336  Identities=11%  Similarity=0.075  Sum_probs=225.5

Q ss_pred             HHHHHHHHHHHcccC---CcccccChhhHHHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHHHHHHHHHHH
Q 010842          103 AGFLGEMLCACFNSV---GFNWLASPASTELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVTLIAARDRAL  178 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~  178 (499)
                      +..+.+.+...+...   ...|...++..++++++.+++.+.+|.+ .+       ..++|+|+|+|+..++.+..+   
T Consensus        93 ~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~-------~v~~t~G~~~al~~~~~~l~~---  162 (448)
T 3aow_A           93 KEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGISQDN-------DIMITSGSQQALDLIGRVFLN---  162 (448)
T ss_dssp             HHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCTTS-------EEEEESSHHHHHHHHHHHHCC---
T ss_pred             HHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcCChh-------hEEEeCcHHHHHHHHHHHHcC---
Confidence            445555555554332   1345555678899999889888888984 22       469999999999888877632   


Q ss_pred             hHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEE-EEecCCC
Q 010842          179 DAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFL-CATVGTT  257 (499)
Q Consensus       179 ~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~v-v~t~gtt  257 (499)
                              ++..|++...+|.++..+++..|.   +++.||.+++   .+|+++|+++++.....+.++.+| +...++|
T Consensus       163 --------~Gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~---g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~N  228 (448)
T 3aow_A          163 --------PGDIVVVEAPTYLAALQAFNFYEP---QYIQIPLDDE---GMKVEILEEKLKELKSQGKKVKVVYTVPTFQN  228 (448)
T ss_dssp             --------TTCEEEEEESCCHHHHHHHHTTCC---EEEEEEEETT---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCT
T ss_pred             --------CCCEEEEeCCChHHHHHHHHHcCC---EEEEeccCCC---CCCHHHHHHHHhhhhccCCCCeEEEECCCCCC
Confidence                    466788899999999999999999   9999998764   499999999997432232345565 5678899


Q ss_pred             cccccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhc-CCCCCceeEecccccccCCCcceEEEEeCchhH
Q 010842          258 STTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN-GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLL  333 (499)
Q Consensus       258 ~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~-g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l  333 (499)
                      +||.+-+   +++|+++|++||+++++|++|+.+.+.......... +....+.+..+.+|+++....+|+++.+++ ..
T Consensus       229 PtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~~GlriG~v~~~~~-l~  307 (448)
T 3aow_A          229 PAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILAPGFRIGWMVGDPG-II  307 (448)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTCGGGCCEEEEECHH-HH
T ss_pred             CcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhccccccEEEEEeCHH-HH
Confidence            9999965   579999999999999999999876432111111110 112245677888999983245899988643 22


Q ss_pred             HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc----HHHHHHHHHHHHHHHHHHHHHHhc-CC-
Q 010842          334 VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG----VLNLQSHIRSDIRLAKMFEGFVKS-DP-  407 (499)
Q Consensus       334 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g----~~g~~~~~~~~~~~a~~l~~~L~~-~~-  407 (499)
                       +.+.......                +. ++   ..+..+++...+.    .+.++++.++..++++++.+.|++ .| 
T Consensus       308 -~~l~~~~~~~----------------~~-~~---~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~  366 (448)
T 3aow_A          308 -RKMEIAKQST----------------DL-CT---NVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRDAMLEALEEFMPE  366 (448)
T ss_dssp             -HHHHHHHHHH----------------HS-SC---CHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCT
T ss_pred             -HHHHHHHHHh----------------cC-CC---CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence             2221110000                00 00   2333344433332    244666677777888999999986 57 


Q ss_pred             CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE----CCEEEEEEeccCCCCcHHHHHHHH
Q 010842          408 RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV----GGLYMLRFAVGASLTDERHVVAAW  483 (499)
Q Consensus       408 ~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lRi~~~~~~~t~~di~~l~  483 (499)
                      ++++..+.....+++++....         ...++.++|.++|+.+..+..+    .+..++|+++. . .++++|++++
T Consensus       367 g~~~~~p~~g~~~~v~~~~~~---------~~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls~~-~-~~~e~i~~~~  435 (448)
T 3aow_A          367 GVKWTKPEGGMFIWVTLPDGI---------DSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFT-Y-VDEDKIMEGI  435 (448)
T ss_dssp             TCEECCCSBSSEEEEECSTTC---------CHHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEECS-S-SCTHHHHHHH
T ss_pred             CeEEeCCCccEEEEEEcCCCC---------CHHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEEeC-C-CCHHHHHHHH
Confidence            688764444555666664311         1356778888888655544433    24578999996 3 4889999999


Q ss_pred             HHHHHHHHHHhc
Q 010842          484 ELIMEGADRLFK  495 (499)
Q Consensus       484 ~~l~~~~~~l~~  495 (499)
                      ++|.++.+++.+
T Consensus       436 ~~L~~~l~~~~~  447 (448)
T 3aow_A          436 KRLAETIKEELK  447 (448)
T ss_dssp             HHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHh
Confidence            999999887654

>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*

Probab=99.91  E-value=1.8e-23  Score=210.72  Aligned_cols=318  Identities=14%  Similarity=0.081  Sum_probs=213.7

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ..+.+.+...+.. ...|...+...++++.    +++++|.+.+       ..++|+|||+|+..++.+...        
T Consensus        41 ~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~----la~~~~~~~~-------~v~~~~g~~~a~~~~~~~~~~--------  100 (381)
T 1v2d_A           41 PFLLEAVRRALGR-QDQYAPPAGLPALREA----LAEEFAVEPE-------SVVVTSGATEALYVLLQSLVG--------  100 (381)
T ss_dssp             HHHHHHHHHHTTT-SCSCCCTTCCHHHHHH----HHHHHTSCGG-------GEEEESSHHHHHHHHHHHHCC--------
T ss_pred             HHHHHHHHHHHHH-hcCCCCCCCCHHHHHH----HHHhcCCChh-------hEEEcCChHHHHHHHHHHhCC--------
Confidence            3455555555543 2345544456667766    6666887654       369999999999988887632        


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC--CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS--VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~--~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                         ++..|+++..+|.++..+++..|+   +++.+|++  ++ ++.+|+++|+++++++      +.+|+++.++|++|.
T Consensus       101 ---~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~~~~nptG~  167 (381)
T 1v2d_A          101 ---PGDEVVVLEPFFDVYLPDAFLAGA---KARLVRLDLTPE-GFRLDLSALEKALTPR------TRALLLNTPMNPTGL  167 (381)
T ss_dssp             ---TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEEETT-EEECCHHHHHTTCCTT------EEEEEEESSCTTTCC
T ss_pred             ---CCCEEEEcCCCchhHHHHHHHcCC---EEEEEeCCCCCc-cCCcCHHHHHHhcCcC------CEEEEECCCCCCCCC
Confidence               456788899999999999999999   99999987  33 3689999999988532      457888899999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhh
Q 010842          262 VDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKAL  337 (499)
Q Consensus       262 id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~  337 (499)
                      +-|   +++|+++|++||+++|+|++|+++.+ .........-....|.++.++||+++.| ..+|+++++++ .. +.+
T Consensus       168 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~-~~-~~~  244 (381)
T 1v2d_A          168 VFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKE-FM-PRL  244 (381)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTT-TH-HHH
T ss_pred             ccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHH-HH-HHH
Confidence            965   89999999999999999999987643 1111111110235899999999998744 34899888653 22 222


Q ss_pred             cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--c--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--G--VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g--~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                      .....+..              +    +  ...+..+++...+  +  .++++++.++..++++++.+.|++. ++++..
T Consensus       245 ~~~~~~~~--------------~----~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~  303 (381)
T 1v2d_A          245 AGMRQWTS--------------F----S--APTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-GLRVYV  303 (381)
T ss_dssp             HHHHHHHT--------------S----S--CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCCEEC
T ss_pred             HHHHhhcc--------------c----C--CCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC-CCEecC
Confidence            11000000              0    0  0122222222222  2  4567888899999999999999985 888775


Q ss_pred             CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC----CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG----GLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      +.....+++.+.+.            + +.+.+.+.|+.+..+..+.    +..++|+++. .  ++++|+++++.|.++
T Consensus       304 ~~~~~~~~~~~~~~------------~-~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~-~--~~~~i~~~~~~l~~~  367 (381)
T 1v2d_A          304 PEGTYFLMAELPGW------------D-AFRLVEEARVALIPASAFYLEDPPKDLFRFAFC-K--TEEELHLALERLGRV  367 (381)
T ss_dssp             CSBSSEEEEECTTC------------C-HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECC-S--CHHHHHHHHHHHHHH
T ss_pred             CCcceEEEEecChH------------h-HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeC-C--CHHHHHHHHHHHHHH
Confidence            44344555655331            1 4455566786544433332    3468999996 3  899999999999988


Q ss_pred             HHHHh
Q 010842          490 ADRLF  494 (499)
Q Consensus       490 ~~~l~  494 (499)
                      .++..
T Consensus       368 l~~~r  372 (381)
T 1v2d_A          368 VNSPR  372 (381)
T ss_dssp             C----
T ss_pred             Hhhcc
Confidence            76543

>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1

Probab=99.91  E-value=9e-23  Score=208.80  Aligned_cols=337  Identities=10%  Similarity=0.060  Sum_probs=224.7

Q ss_pred             HHHHHHHHHHHcccC---CcccccChhhHHHHHHHHHHHHHHcCCC---CccccCCCccEEEcCChHHHHHHHHHHHHHH
Q 010842          103 AGFLGEMLCACFNSV---GFNWLASPASTELEIVVMDWLATMLKLP---KTFMFSGTGGGVIQNTTSDSILVTLIAARDR  176 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~---~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~  176 (499)
                      +..+.+.+...+..+   ...|...++..++++++.+|+.+.+|.+   .+       ..++|+|||+|+..++.+..+ 
T Consensus        60 ~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~-------~v~~t~G~~~al~~~~~~l~~-  131 (425)
T 1vp4_A           60 RKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDED-------NLIFTVGSQQALDLIGKLFLD-  131 (425)
T ss_dssp             HHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGG-------GEEEEEHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcc-------cEEEeccHHHHHHHHHHHhCC-
Confidence            445555555555432   2345555567899999999998887853   33       468999999998888776532 


Q ss_pred             HHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHc--CCccEEE-EEe
Q 010842          177 ALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEA--GLVPLFL-CAT  253 (499)
Q Consensus       177 ~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~--g~~p~~v-v~t  253 (499)
                                ++..|+++..+|.++..+++..|.   +++.+|++++   .+|+++|++++++..++  +..+.+| +.+
T Consensus       132 ----------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~  195 (425)
T 1vp4_A          132 ----------DESYCVLDDPAYLGAINAFRQYLA---NFVVVPLEDD---GMDLNVLERKLSEFDKNGKIKQVKFIYVVS  195 (425)
T ss_dssp             ----------TTCEEEEEESCCHHHHHHHHTTTC---EEEEEEEETT---EECHHHHHHHHHHHHHTTCGGGEEEEEEEC
T ss_pred             ----------CCCEEEEeCCCcHHHHHHHHHcCC---EEEEeccCCC---CCCHHHHHHHHHhhhhcccCCCceEEEECC
Confidence                      456788899999999999999999   9999998753   39999999999863221  1234455 577


Q ss_pred             cCCCcccccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhh-cCCCCCceeEecccccccCCCcceEEEEeC
Q 010842          254 VGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL-NGIERVDSFSFSPHKWLLSYLDCCCLWVKQ  329 (499)
Q Consensus       254 ~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~-~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~  329 (499)
                      .++|+||.+-|   +++|+++|++||+++++|++|+.+........... .+....+.++.+.+|+++....+|++++++
T Consensus       196 ~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~  275 (425)
T 1vp4_A          196 NFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGSK  275 (425)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEECCH
T ss_pred             CCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccccccceEEEeeCH
Confidence            89999999965   67899999999999999999987643211111110 011235677889999998334579988864


Q ss_pred             chhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc----HHHHHHHHHHHHHHHHHHHHHHhc
Q 010842          330 PGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG----VLNLQSHIRSDIRLAKMFEGFVKS  405 (499)
Q Consensus       330 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g----~~g~~~~~~~~~~~a~~l~~~L~~  405 (499)
                       +.. +.+.......                +.    ....+..+++...+.    .+.+++..++..++++++.+.|++
T Consensus       276 -~~~-~~l~~~~~~~----------------~~----~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~  333 (425)
T 1vp4_A          276 -EFI-RKIVQAKQSA----------------DL----CSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEE  333 (425)
T ss_dssp             -HHH-HHHHHHHHHH----------------HS----SCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred             -HHH-HHHHHHhhhh----------------cC----CCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence             322 2221100000                00    012344444444442    345667777778889999999987


Q ss_pred             C-C---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC----CEEEEEEeccCCCCcHH
Q 010842          406 D-P---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG----GLYMLRFAVGASLTDER  477 (499)
Q Consensus       406 ~-~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----g~~~lRi~~~~~~~t~~  477 (499)
                      . |   ++++..+...+.+++++....  +       ..++.+.|.++|+.+..+..+.    +..++|+++..  .+++
T Consensus       334 ~~~~~~g~~~~~~~~g~~~~~~~~~~~--~-------~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~--~~~e  402 (425)
T 1vp4_A          334 YFSDIPGVKWVKSEGGLFIWLTLPEGF--D-------TWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFCL--PPDE  402 (425)
T ss_dssp             HSTTSTTCEECCCSBSSEEEEECCTTC--C-------TTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECSS--SCHH
T ss_pred             hCCCCCceEEecCCccEEEEEEcCCCC--C-------HHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEeCC--CCHH
Confidence            3 5   688765544556777764310  0       2346667777786544433331    35689999963  3899


Q ss_pred             HHHHHHHHHHHHHHHHhcc
Q 010842          478 HVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       478 di~~l~~~l~~~~~~l~~~  496 (499)
                      ++++++++|.++.+++.++
T Consensus       403 ~i~~~l~~l~~~l~~~~~~  421 (425)
T 1vp4_A          403 KIVEGIKRLREVVLEYGKE  421 (425)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            9999999999998876544

>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*

Probab=99.91  E-value=1.6e-23  Score=212.65  Aligned_cols=324  Identities=18%  Similarity=0.146  Sum_probs=213.0

Q ss_pred             HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842          105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE  184 (499)
Q Consensus       105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~  184 (499)
                      .+.+.+...+..+  .|..++...+++++    +++++|.+.         .+++++||+|+..++.+++-.        
T Consensus        45 ~v~~a~~~~~~~~--~y~~~~~~~~l~~~----la~~~~~~~---------~v~~~~Gt~a~~~~l~~~~~~--------  101 (399)
T 2oga_A           45 ETDAAIARVLDSG--RYLLGPELEGFEAE----FAAYCETDH---------AVGVNSGMDALQLALRGLGIG--------  101 (399)
T ss_dssp             HHHHHHHHHHHHT--CCSSSHHHHHHHHH----HHHHTTSSE---------EEEESCHHHHHHHHHHHTTCC--------
T ss_pred             HHHHHHHHHHhcC--CCCCchhHHHHHHH----HHHHHCCCe---------EEEecCHHHHHHHHHHHhCCC--------
Confidence            3444455444332  34445666666665    788888763         388999999998888776211        


Q ss_pred             ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842          185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN  264 (499)
Q Consensus       185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~  264 (499)
                        ++..|+++..+|.++..+++..|+   +++.+|++++ ++.+|+++|+++|+++      +.+|+   +++++|.+.|
T Consensus       102 --~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~---~~n~tG~~~~  166 (399)
T 2oga_A          102 --PGDEVIVPSHTYIASWLAVSATGA---TPVPVEPHED-HPTLDPLLVEKAITPR------TRALL---PVHLYGHPAD  166 (399)
T ss_dssp             --TTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCSS-SSSBCHHHHHHHCCTT------EEEEC---CBCGGGCCCC
T ss_pred             --CcCEEEECCCccHHHHHHHHHCCC---EEEEEecCCC-CCCcCHHHHHHhcCCC------CeEEE---EeCCcCCccC
Confidence              456788899999999999999999   9999998753 4789999999998653      23444   4678999999


Q ss_pred             hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccc--ccccCCCcceEEEEeCchhHHHhhcCCcc
Q 010842          265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPH--KWLLSYLDCCCLWVKQPGLLVKALSTDPE  342 (499)
Q Consensus       265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~h--K~l~~p~~~g~l~~r~~~~l~~~~~~~~~  342 (499)
                      +++|.++|+++|+++++|++|+.+.....  .. . + ...|.++++.|  |+++.|..+|+++.++++......... .
T Consensus       167 l~~i~~l~~~~~~~li~Dea~~~g~~~~~--~~-~-~-~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~-~  240 (399)
T 2oga_A          167 MDALRELADRHGLHIVEDAAQAHGARYRG--RR-I-G-AGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLR-N  240 (399)
T ss_dssp             HHHHHHHHHHHTCEECEECTTCTTCEETT--EE-T-T-CTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHH-B
T ss_pred             HHHHHHHHHHcCCEEEEECcccccCccCC--ee-c-c-cccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHH-h
Confidence            99999999999999999999976533211  11 1 1 12588888885  999865456777776554332211100 0


Q ss_pred             CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCc-eE--
Q 010842          343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHF-AL--  419 (499)
Q Consensus       343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~-~~--  419 (499)
                      +  ...      ..+.......+.+...+..++++..+  +.++++.++..++++++.+.|+++|++++...+.. +.  
T Consensus       241 ~--g~~------~~~~~~~~g~~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~  310 (399)
T 2oga_A          241 Y--GSR------QKYSHETKGTNSRLDEMQAAVLRIRL--AHLDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPDTDPVW  310 (399)
T ss_dssp             T--TCS------STTCCCSCCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTTEECCC
T ss_pred             c--Ccc------ccccccccccCCCcCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCccee
Confidence            0  000      00100011122244556666665544  55667788888999999999999888876543322 21  


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee--EC--------C-------------EEEEEEeccCCCCcH
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI--VG--------G-------------LYMLRFAVGASLTDE  476 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~~--------g-------------~~~lRi~~~~~~~t~  476 (499)
                      +.|.+....          ..++.+.|.++|+.+.....  ..        +             ..++|+++ ++.+|+
T Consensus       311 ~~~~~~~~~----------~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~-~~~~t~  379 (399)
T 2oga_A          311 HLFTVRTER----------RDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPI-GPHLER  379 (399)
T ss_dssp             SSEEEECSS----------HHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECC-STTCCH
T ss_pred             EEEEEECCC----------HHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccC-CCCCCH
Confidence            123332211          35677778888864422110  00        0             25799998 488999


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 010842          477 RHVVAAWELIMEGADRL  493 (499)
Q Consensus       477 ~di~~l~~~l~~~~~~l  493 (499)
                      +|+++++++|+++.+++
T Consensus       380 edi~~~~~~l~~~~~~l  396 (399)
T 2oga_A          380 PQALRVIDAVREWAERV  396 (399)
T ss_dssp             HHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHHHHHHHh
Confidence            99999999999987764

>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}

Probab=99.91  E-value=1.1e-24  Score=224.24  Aligned_cols=291  Identities=13%  Similarity=0.060  Sum_probs=194.7

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      ....++.+++++ +|.+..        .++|+|+|+||..++.++..           ++..|+++..+|.++.+++...
T Consensus        57 ~~~~~~~~~la~-~g~~~~--------v~~~~G~t~a~~~~~~a~~~-----------~gd~Vlv~~~~h~s~~~~~~~~  116 (446)
T 2x3l_A           57 EVILKSMKQVEK-HSDYDG--------YFLVNGTTSGILSVIQSFSQ-----------KKGDILMARNVHKSVLHALDIS  116 (446)
T ss_dssp             SHHHHHHHHHCS-CTTEEE--------EEESSHHHHHHHHHHHTTTT-----------SSSCEEECTTCCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHh-cCCCce--------EEEeCCHHHHHHHHHHHhcC-----------CCCEEEEecCccHHHHHHHHHc
Confidence            344566777999 998743        48899999999998887632           5667999999999999999999


Q ss_pred             CCCCCCeEEeeC--CCCCC--CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecc
Q 010842          209 GVSPANIRALPT--SVDAN--FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAA  284 (499)
Q Consensus       209 G~g~~~v~~v~~--~~~~~--~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A  284 (499)
                      |+   .++.++.  +++..  +.+|+++|   +.++      +.+|+++. +|++|.+.|+++|+++|++||+|+|+|+|
T Consensus       117 G~---~~~~v~~~~~~~~~~~~~~d~~~l---~~~~------~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea  183 (446)
T 2x3l_A          117 QQ---EGHFIETHQSPLTNHYNKVNLSRL---NNDG------HKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEA  183 (446)
T ss_dssp             TC---CEEECEEEECTTTSSEEEEEC----------------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECT
T ss_pred             CC---eEEEEeCeeccccCcCCCCCHHHH---cCCC------ceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcch
Confidence            99   9999998  53200  47898887   3322      33677777 56699999999999999999999999999


Q ss_pred             ccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCC
Q 010842          285 YAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGT  364 (499)
Q Consensus       285 ~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~  364 (499)
                      |++...+.+...... .. .+|+++.++||+++++.++|+++++++..-...+.....+                  .+.
T Consensus       184 ~~~~~~f~~~~~~~~-~~-g~Di~~~S~~K~l~~~~g~g~l~~~~~~i~~~~~~~~~~~------------------~~~  243 (446)
T 2x3l_A          184 HGAHFGLQGFPDSTL-NY-QADYVVQSFHKTLPALTMGSVLYIHKNAPYRENIIEYLSY------------------FQT  243 (446)
T ss_dssp             TCTTTTSTTSCCCGG-GG-TCSEEEECHHHHSSSCTTCEEEEEETTCTTHHHHHHHHHH------------------HSC
T ss_pred             hhhhhccCCCCCChH-Hc-CCCEEEECCccccccccccEEEEEcCCcCCHHHHHHHHHH------------------HcC
Confidence            987332222100111 11 3799999999999988899999998753100111100000                  011


Q ss_pred             CCCC-C-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHH
Q 010842          365 GRRF-K-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKL  442 (499)
Q Consensus       365 sr~~-~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l  442 (499)
                      +.+. . ...+..+++.+...+.+++.++..++++++++.     +++++.+.....+++.+.+..          ..++
T Consensus       244 ~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~-----g~~~~~~~~~~~l~i~~~~~~----------~~~l  308 (446)
T 2x3l_A          244 SSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK-----GFEMLQVDDPLKLLIKYEGFT----------GHDI  308 (446)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-----TCEEEECSSTTEEEEECTTSC----------HHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-----CCEECcCCCCeEEEEEeCCcC----------HHHH
Confidence            1111 1 123444555554445555778888888888777     677775433335666664322          3567


Q ss_pred             HHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          443 LDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       443 ~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .+.|.++|+.+ ..   .+..++|++++ ..+|++|+ +++++|+++.+++
T Consensus       309 ~~~L~~~GI~v-~~---~g~~~iRi~~~-~~~t~e~i-~l~~aL~~~~~~~  353 (446)
T 2x3l_A          309 QNWFMNAHIYL-EL---ADDYQALAILP-LWHHDDTY-LFDSLLRKIEDMI  353 (446)
T ss_dssp             HHHHHHTTEEE-SE---ECSSCEEEECC-CCCTTCCC-CHHHHHHHHHTCC
T ss_pred             HHHHHHCCCEE-Ee---cCCCEEEEEee-cCCCHHHH-HHHHHHHHHHHhh
Confidence            77787787443 21   13357999995 77899999 9999999987644

>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1

Probab=99.91  E-value=1e-22  Score=207.56  Aligned_cols=341  Identities=15%  Similarity=0.077  Sum_probs=222.8

Q ss_pred             HHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHc------CCCCccccCCCccEEEcCChHHHHHHHHHHHHHH
Q 010842          104 GFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATML------KLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDR  176 (499)
Q Consensus       104 ~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~------g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~  176 (499)
                      ..+.+.+...+... ...|...++..++++++.+|+.+.+      |.+...     ...++|+|||+|+..++.+..+ 
T Consensus        53 ~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~-----~~v~~~~g~~~al~~~~~~l~~-  126 (416)
T 1bw0_A           53 AAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVK-----DNVVLCSGGSHGILMAITAICD-  126 (416)
T ss_dssp             HHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCG-----GGEEEESHHHHHHHHHHHHHCC-
T ss_pred             HHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCc-----ceEEEeCChHHHHHHHHHHhCC-
Confidence            34444455444322 2345444567889999888887432      322110     2469999999999888877632 


Q ss_pred             HHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCC
Q 010842          177 ALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGT  256 (499)
Q Consensus       177 ~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gt  256 (499)
                                ++..|+++..+|.++..+++..|+   +++.+|++++++|.+|+++|+++++++      +.+|+++.++
T Consensus       127 ----------~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~------~~~v~i~~p~  187 (416)
T 1bw0_A          127 ----------AGDYALVPQPGFPHYETVCKAYGI---GMHFYNCRPENDWEADLDEIRRLKDDK------TKLLIVTNPS  187 (416)
T ss_dssp             ----------TTCEEEEEESCCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHHHCCTT------EEEEEEESSC
T ss_pred             ----------CCCEEEEcCCCcHhHHHHHHHcCc---EEEEeecCcccCCCCCHHHHHHHhccC------CeEEEEeCCC
Confidence                      456788899999999999999999   999999875434789999999988643      3467788899


Q ss_pred             CcccccCC---hhHHHHHHHHhCCEEEeeccccchhccCc----cchhhhcCCCC--CceeEecccccccCC-CcceEEE
Q 010842          257 TSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICP----EFRHYLNGIER--VDSFSFSPHKWLLSY-LDCCCLW  326 (499)
Q Consensus       257 t~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~----~~~~~~~g~~~--aDsi~~~~hK~l~~p-~~~g~l~  326 (499)
                      |++|.+.|   +++|+++|++||+++++|++|+.+.+...    .... +..+..  .+.++.+.+|+++.| ..+|+++
T Consensus       188 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~Glr~G~~~  266 (416)
T 1bw0_A          188 NPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTS-VADFETTVPRVILGGTAKNLVVPGWRLGWLL  266 (416)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCC-TTSSCCSCCEEEEEESTTTTSCGGGCCEEEE
T ss_pred             CCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccC-HHHccCCCcEEEEecchhhCCCCCceEEEEE
Confidence            99999988   99999999999999999999987532211    1111 122211  235677899998765 4589998


Q ss_pred             EeCc-hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010842          327 VKQP-GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGF  402 (499)
Q Consensus       327 ~r~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~  402 (499)
                      ++++ ..+.........+. .               ...+  ...+...+   ++...+.+++++..++..++++++.+.
T Consensus       267 ~~~~~~~~~~~~~~~~~~~-~---------------~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~  328 (416)
T 1bw0_A          267 YVDPHGNGPSFLEGLKRVG-M---------------LVCG--PCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNH  328 (416)
T ss_dssp             EECTTCSCHHHHHHHHHHH-H---------------HHTC--SCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             eeCchhhHHHHHHHHHHHh-c---------------cccC--CCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence            8775 21111100000000 0               0000  11233333   333334677888999999999999999


Q ss_pred             HhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHH
Q 010842          403 VKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVA  481 (499)
Q Consensus       403 L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~  481 (499)
                      |+++|+++++.+...+.+.+++.........    ...++.++|. ++|+.+..+..+....++|++++   +++++|++
T Consensus       329 L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~---~~~e~l~~  401 (416)
T 1bw0_A          329 IGECIGLAPTMPRGAMYLMSRIDLEKYRDIK----TDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTT---RPVEVYRE  401 (416)
T ss_dssp             HTTSTTEEECCCCBTTEEEEEECGGGBSSCC----SHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC---SCHHHHHH
T ss_pred             HHhCCCCcccCCCeeEEEEEeCCHHHcCCCC----CHHHHHHHHHHHCCEEEecccccCCCCeEEEEec---CCHHHHHH
Confidence            9998899876544455566666421000000    1345666664 66865544444443468999994   67899999


Q ss_pred             HHHHHHHHHHHHhc
Q 010842          482 AWELIMEGADRLFK  495 (499)
Q Consensus       482 l~~~l~~~~~~l~~  495 (499)
                      +++.|.++.++..+
T Consensus       402 ~l~~l~~~l~~~~~  415 (416)
T 1bw0_A          402 AVERIKAFCQRHAA  415 (416)
T ss_dssp             HHHHHHHHHHHHBC
T ss_pred             HHHHHHHHHHHhhc
Confidence            99999998876543

>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0

Probab=99.91  E-value=3.3e-22  Score=199.98  Aligned_cols=308  Identities=12%  Similarity=0.100  Sum_probs=212.2

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ..+.+.+...+.. ...| ..+...+++    +++++++|.+.+       ..++|+|||+|+..++.+...        
T Consensus        48 ~~v~~a~~~~~~~-~~~y-~~~~~~~lr----~~la~~~~~~~~-------~v~~~~g~t~a~~~~~~~~~~--------  106 (363)
T 3ffh_A           48 KKVAAIQANSSVE-TEIY-PDGWASSLR----KEVADFYQLEEE-------ELIFTAGVDELIELLTRVLLD--------  106 (363)
T ss_dssp             HHHHHHHHTCBSC-CCBC-----CHHHH----HHHHHHHTCCGG-------GEEEESSHHHHHHHHHHHHCS--------
T ss_pred             HHHHHHHHHHHHH-hhcC-CCcchHHHH----HHHHHHhCCChh-------hEEEeCCHHHHHHHHHHHHcc--------
Confidence            3444555554432 2222 233444444    458888887654       469999999999888876532        


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD  263 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id  263 (499)
                         ++..|+++..+|.++...++..|.   +++.+|.+++  +.+|+++|+++++++      +.+|+++.++|++|.+.
T Consensus       107 ---~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~------~~~v~~~~p~nptG~~~  172 (363)
T 3ffh_A          107 ---TTTNTVMATPTFVQYRQNALIEGA---EVREIPLLQD--GEHDLEGMLNAIDEK------TTIVWICNPNNPTGNYI  172 (363)
T ss_dssp             ---TTCEEEEEESSCHHHHHHHHHHTC---EEEEEECCTT--SCCCHHHHHHHCCTT------EEEEEEESSCTTTCCCC
T ss_pred             ---CCCEEEEcCCChHHHHHHHHHcCC---EEEEecCCCC--CCcCHHHHHHhcccC------CCEEEEeCCCCCcCCCc
Confidence               456788888999999999999999   9999999863  699999999998653      44788899999999999


Q ss_pred             ChhHHHHHHHHh--CCEEEeeccccchhccCccchhhh--cCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhc
Q 010842          264 NVEPLAEVANEY--GIWVHVDAAYAGSACICPEFRHYL--NGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALS  338 (499)
Q Consensus       264 ~l~~I~~ia~~~--~~~lhvD~A~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~  338 (499)
                      |+++|.++|+.+  |+++|+|++|+.+..  +......  ......+.+..+.+|+++.| ..+|+++++ ++.. +.+.
T Consensus       173 ~~~~l~~l~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~-~~l~  248 (363)
T 3ffh_A          173 ELADIQAFLDRVPSDVLVVLDEAYIEYVT--PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD-KEII-RQLN  248 (363)
T ss_dssp             CHHHHHHHHTTSCTTSEEEEECTTGGGCS--SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEEC-HHHH-HHHH
T ss_pred             CHHHHHHHHHhCCCCcEEEEeCchHhhcC--ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecC-HHHH-HHHH
Confidence            999999999888  999999999987643  1111111  11122346677889999743 456888884 3332 2221


Q ss_pred             C-CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC
Q 010842          339 T-DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH  416 (499)
Q Consensus       339 ~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~  416 (499)
                      . ...|                       ....+..+++...+ ..+++++..++..++++++.+.|++++++++. ++.
T Consensus       249 ~~~~~~-----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~  304 (363)
T 3ffh_A          249 IVRPPF-----------------------NTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEKVKLY-PAN  304 (363)
T ss_dssp             HTCCSC-----------------------CCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEC-CCC
T ss_pred             HhCCCC-----------------------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCCceEC-CCC
Confidence            1 1000                       11234444444444 23667888889999999999999997799876 455


Q ss_pred             ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      .+.+++.+.. .          ..++.+.|.++|+.+..+..+....++|++++    +++|+++++++|+++
T Consensus       305 ~~~~~~~~~~-~----------~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~----~~~~i~~~~~~l~~~  362 (363)
T 3ffh_A          305 GNFVLIDLGI-E----------AGTIFSYLEKNGYITRSGAALGFPTAVRITIG----KEEDNSAVIALLEKL  362 (363)
T ss_dssp             SSEEEEECSS-C----------HHHHHHHHHHTTEECEETTTTTCTTEEEEECC----CHHHHHHHHHHHHHH
T ss_pred             CeEEEEECCC-C----------HHHHHHHHHHCCeEEEeCccCCCCCeEEEECC----CHHHHHHHHHHHHHh
Confidence            5667776643 1          45677788888855444333333568999984    899999999999875

>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*

Probab=99.91  E-value=5.5e-23  Score=210.58  Aligned_cols=339  Identities=12%  Similarity=0.076  Sum_probs=223.0

Q ss_pred             HHHHHHHHHHccc---CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCc-cEEEcCChHHHHHHHHHHHHHHHHh
Q 010842          104 GFLGEMLCACFNS---VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTG-GGVIQNTTSDSILVTLIAARDRALD  179 (499)
Q Consensus       104 ~~~~~~l~~~~n~---~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~-~g~~t~ggt~A~~~al~~ar~~~~~  179 (499)
                      ..+.+.+...++.   ....|...++..++++++.+|+.+.+|.+...     . ..++|+|||+|+..++.+...    
T Consensus        53 ~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~-----~~~v~~~~g~~~a~~~~~~~~~~----  123 (429)
T 1yiz_A           53 KYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINP-----MTEVLVTVGAYEALYATIQGHVD----  123 (429)
T ss_dssp             HHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCT-----TTSEEEESHHHHHHHHHHHHHCC----
T ss_pred             HHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCC-----cCCEEEecChHHHHHHHHHHhcC----
Confidence            3455666665543   22345545567899999999999988864211     1 368999999999988887632    


Q ss_pred             HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCC--------CCccCHHHHHHHHHHHHHcCCccEEEE
Q 010842          180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDA--------NFSLSPQLLRRAVEADVEAGLVPLFLC  251 (499)
Q Consensus       180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~--------~~~~d~~~L~~~i~~~~~~g~~p~~vv  251 (499)
                             ++..|+++..+|.++..+++..|.   +++.+|.+.+.        +|.+|+++|+++++++      +.+|+
T Consensus       124 -------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~  187 (429)
T 1yiz_A          124 -------EGDEVIIIEPFFDCYEPMVKAAGG---IPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK------TKMII  187 (429)
T ss_dssp             -------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTT------EEEEE
T ss_pred             -------CCCEEEEcCCCchhHHHHHHHcCC---EEEEEeCCcccccccccccCcccCHHHHHHHhccC------ceEEE
Confidence                   456788888999999999999999   99999987642        4689999999988532      45777


Q ss_pred             EecCCCcccccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEE
Q 010842          252 ATVGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCL  325 (499)
Q Consensus       252 ~t~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l  325 (499)
                      ++.++|++|.+-|   +++|+++|++||+++++|++|+++.+........  +.+....|.++.++||+++.| ..+|++
T Consensus       188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~  267 (429)
T 1yiz_A          188 INTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWA  267 (429)
T ss_dssp             EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEE
T ss_pred             ECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEE
Confidence            7899999999974   9999999999999999999998764322111111  111234788999999998744 348998


Q ss_pred             EEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh----c--HHHHHHHHHHHHHHHHHH
Q 010842          326 WVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY----G--VLNLQSHIRSDIRLAKMF  399 (499)
Q Consensus       326 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~----g--~~g~~~~~~~~~~~a~~l  399 (499)
                      +++++ .. +.+.....+..              +   .........+..++...    +  .+.+++..++..++++++
T Consensus       268 ~~~~~-~~-~~l~~~~~~~~--------------~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l  328 (429)
T 1yiz_A          268 YGPEA-LL-KNLQMVHQNCV--------------Y---TCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYM  328 (429)
T ss_dssp             ESCHH-HH-HHHHHHHHTTT--------------C---CCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHH
T ss_pred             EeCHH-HH-HHHHHHHhhcc--------------c---CCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHH
Confidence            88643 22 22211100000              0   00000111223333331    3  455778888888999999


Q ss_pred             HHHHhcCCCeEEEcCCCceEEEEEecCCCCC---CcchhHHHHHHHHHHHH-hcCCEEEEeeeEC-------CEEEEEEe
Q 010842          400 EGFVKSDPRFEIVVPRHFALVCFRLNPYPHS---GSADTEMLNRKLLDWVN-STGRVYLTHTIVG-------GLYMLRFA  468 (499)
Q Consensus       400 ~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~---~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~-------g~~~lRi~  468 (499)
                      .+.|++. ++++..+.....+++++......   ..........++.++|. ++|+.+..+..+.       +..++|++
T Consensus       329 ~~~L~~~-g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis  407 (429)
T 1yiz_A          329 ASFLAEV-GMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYC  407 (429)
T ss_dssp             HHHHHHH-TCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEE
T ss_pred             HHHHHhC-CCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEE
Confidence            9999887 78876554445677776532000   00000011356677776 5675443332332       24689999


Q ss_pred             ccCCCCcHHHHHHHHHHHHHHH
Q 010842          469 VGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       469 ~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      +.   +++++|++++++|.++.
T Consensus       408 ~~---~~~e~i~~~l~~l~~~l  426 (429)
T 1yiz_A          408 FF---KKDENLQKAAEILRKWK  426 (429)
T ss_dssp             CC---SCHHHHHHHHHHHHHHS
T ss_pred             ec---CCHHHHHHHHHHHHHhc
Confidence            96   48999999999998764

>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0

Probab=99.91  E-value=8.7e-23  Score=204.54  Aligned_cols=284  Identities=14%  Similarity=0.100  Sum_probs=201.2

Q ss_pred             HHHHHHHHcCC-CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCC
Q 010842          134 VMDWLATMLKL-PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSP  212 (499)
Q Consensus       134 ~~~~la~l~g~-~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~  212 (499)
                      +.+++++++|. +.+       ..++|+|||+|+..++.+...           ++..|+++..+|.++..+++..|.  
T Consensus        72 l~~~la~~~g~~~~~-------~i~~~~g~t~a~~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~g~--  131 (367)
T 3euc_A           72 LRAKLKEVMQVPAGM-------EVLLGNGSDEIISMLALAAAR-----------PGAKVMAPVPGFVMYAMSAQFAGL--  131 (367)
T ss_dssp             HHHHHHHHHTCCTTC-------EEEEEEHHHHHHHHHHHHTCC-----------TTCEEEEEESCSCCSCHHHHTTTC--
T ss_pred             HHHHHHHHhCCCCcc-------eEEEcCCHHHHHHHHHHHHcC-----------CCCEEEEcCCCHHHHHHHHHHcCC--
Confidence            44458888898 332       468999999999888776532           456788899999999999999999  


Q ss_pred             CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHh--CCEEEeeccccc
Q 010842          213 ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEY--GIWVHVDAAYAG  287 (499)
Q Consensus       213 ~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~--~~~lhvD~A~g~  287 (499)
                       +++.+|+++  ++.+|+++|++++++.     .+.+|+++.++|++|.+   +++++|+++|++|  |+++++|++|+.
T Consensus       132 -~~~~v~~~~--~~~~d~~~l~~~l~~~-----~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~  203 (367)
T 3euc_A          132 -EFVGVPLRA--DFTLDRGAMLAAMAEH-----QPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQP  203 (367)
T ss_dssp             -EEEEEECCT--TSCCCHHHHHHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCC
T ss_pred             -eEEEecCCC--CCCCCHHHHHHHhhcc-----CCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchh
Confidence             999999986  4699999999999872     12377788999999999   5678888889999  999999999987


Q ss_pred             hhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCC
Q 010842          288 SACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGR  366 (499)
Q Consensus       288 ~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr  366 (499)
                      +..  ........ ....+.++.+.+|++.....+|+++.++ ... +.+.. ...|                       
T Consensus       204 ~~~--~~~~~~~~-~~~~~i~~~s~sK~~~~G~r~G~~~~~~-~~~-~~~~~~~~~~-----------------------  255 (367)
T 3euc_A          204 FAQ--ESWMSRLT-DFGNLLVMRTVSKLGLAGIRLGYVAGDP-QWL-EQLDKVRPPY-----------------------  255 (367)
T ss_dssp             SSS--CCSGGGGG-TCTTEEEEEECCCTTSCSCCEEEEEECH-HHH-HHHGGGCCSS-----------------------
T ss_pred             hcc--cchHHHHh-hCCCEEEEecchhhcccccCceeeeeCH-HHH-HHHHHhCCCC-----------------------
Confidence            532  11111111 1234577889999944445678888743 322 22211 1100                       


Q ss_pred             CCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHH
Q 010842          367 RFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDW  445 (499)
Q Consensus       367 ~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~  445 (499)
                      ....+..+++...+. .+.+++..++..++++++.+.|+++|++++. ++..+.+.+.+.  .          ..++.+.
T Consensus       256 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~~~~-~~~~~~~~~~~~--~----------~~~l~~~  322 (367)
T 3euc_A          256 NVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVF-PSAANFLLARVP--D----------AAQTFDR  322 (367)
T ss_dssp             CCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSTTCEEC-CCSSSEEEEECS--C----------HHHHHHH
T ss_pred             CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEEEEECC--C----------HHHHHHH
Confidence            012344444444432 4567888899999999999999999999854 555566666664  2          4567777


Q ss_pred             HHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          446 VNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       446 l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      |.++|+.+..+..+.  +..++|++++    +++|+++++++|+++.
T Consensus       323 l~~~gi~v~~~~~~~~~~~~~iRis~~----~~~~i~~~~~~l~~~l  365 (367)
T 3euc_A          323 LLARKVLIKNVSKMHPLLANCLRVTVS----TPEENAQFLEAFAASL  365 (367)
T ss_dssp             HHTTTEECEECGGGCGGGTTEEEEECC----CHHHHHHHHHHHHHHT
T ss_pred             HHHCCeEEEECCccCCCCCCEEEEecC----CHHHHHHHHHHHHHHh
Confidence            888886544333321  2468999984    8999999999998864

>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}

Probab=99.91  E-value=7.1e-23  Score=205.46  Aligned_cols=316  Identities=12%  Similarity=0.048  Sum_probs=216.1

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ..+.+.+...+......|...++..++++++.+|+.+.+|.+...     ...++|+|||+|+..++.+..+        
T Consensus        45 ~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~--------  111 (370)
T 2z61_A           45 KPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIP-----DNIIITGGSSLGLFFALSSIID--------  111 (370)
T ss_dssp             HHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCG-----GGEEEESSHHHHHHHHHHHHCC--------
T ss_pred             HHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCCh-----hhEEECCChHHHHHHHHHHhcC--------
Confidence            445555555554333455555567899999999999888864321     2469999999999988887632        


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD  263 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id  263 (499)
                         ++..|+++..+|.++..+++..|.   +++.+|        +|+++|++++++      .+.+|+++.++|++|.+.
T Consensus       112 ---~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~--------~d~~~l~~~l~~------~~~~v~~~~p~nptG~~~  171 (370)
T 2z61_A          112 ---DGDEVLIQNPCYPCYKNFIRFLGA---KPVFCD--------FTVESLEEALSD------KTKAIIINSPSNPLGEVI  171 (370)
T ss_dssp             ---TTCEEEEESSCCTHHHHHHHHTTC---EEEEEC--------SSHHHHHHHCCS------SEEEEEEESSCTTTCCCC
T ss_pred             ---CCCEEEEeCCCchhHHHHHHHcCC---EEEEeC--------CCHHHHHHhccc------CceEEEEcCCCCCcCccc
Confidence               456788899999999999999999   888887        589999988854      244677889999999999


Q ss_pred             ChhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCC
Q 010842          264 NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD  340 (499)
Q Consensus       264 ~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~  340 (499)
                      |++ |.++|++||+++++|++|+.+.... .....  +.+....|.++.+.||+++.| ..+|+++.+++  +.+.+...
T Consensus       172 ~~~-l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--~~~~~~~~  247 (370)
T 2z61_A          172 DRE-IYEFAYENIPYIISDEIYNGLVYEG-KCYSAIEFDENLEKTILINGFSKLYAMTGWRIGYVISNDE--IIEAILKL  247 (370)
T ss_dssp             CHH-HHHHHHHHCSEEEEECTTTTCBSSS-CCCCGGGTCTTCSSEEEEEESTTTTTCGGGCCEEEECCHH--HHHHHHHH
T ss_pred             CHH-HHHHHHHcCCEEEEEcchhhcccCC-CCcCHHHccCCCCcEEEEecChhccCCccceEEEEEECHH--HHHHHHHH
Confidence            999 9999999999999999998764321 11111  112235788999999999744 34888887763  22222110


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCc
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHF  417 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~  417 (499)
                      .....                    .....+..+++...+   +.+.+++..++..++++++.+.|++. ++++..+...
T Consensus       248 ~~~~~--------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~  306 (370)
T 2z61_A          248 QQNLF--------------------ISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF-GWEVNNPIGA  306 (370)
T ss_dssp             HHHHT--------------------SSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCBCCCCCBT
T ss_pred             Hhhcc--------------------cCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc-CCeecCCCcc
Confidence            00000                    001234444444444   45667788888899999999999987 7776543322


Q ss_pred             eEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      ..+.+.+.. .          ..++.++|. +.|+.+..+..+.  +..++|++++   +++++|+++++.|.++.+
T Consensus       307 ~~~~~~~~~-~----------~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~---~~~~~i~~~~~~l~~~l~  369 (370)
T 2z61_A          307 YYVFPNIGE-D----------GREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA---NSYENIKEGLERIKEFLN  369 (370)
T ss_dssp             TEECCBCSS-C----------HHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC---SCHHHHHHHHHHHHHHHC
T ss_pred             eEEEEecCC-C----------HHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe---CCHHHHHHHHHHHHHHHh
Confidence            233334432 1          355677776 5685544433332  3568999995   688999999999988753

>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}

Probab=99.91  E-value=3.5e-22  Score=199.01  Aligned_cols=292  Identities=11%  Similarity=0.051  Sum_probs=206.3

Q ss_pred             HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCC
Q 010842          132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVS  211 (499)
Q Consensus       132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g  211 (499)
                      .++++++++++|.+.+       ..++|+|||+|+..++.+..+           ++..|+++..+|.++...++..|. 
T Consensus        54 ~~l~~~la~~~~~~~~-------~i~~~~g~~~a~~~~~~~l~~-----------~gd~vl~~~~~~~~~~~~~~~~g~-  114 (354)
T 3ly1_A           54 LMLGNKLAAHHQVEAP-------SILLTAGSSEGIRAAIEAYAS-----------LEAQLVIPELTYGDGEHFAKIAGM-  114 (354)
T ss_dssp             HHHHHHHHHHTTSCGG-------GEEEESHHHHHHHHHHHHHCC-----------TTCEEEEESSSCTHHHHHHHHTTC-
T ss_pred             HHHHHHHHHHhCCChH-------HEEEeCChHHHHHHHHHHHhC-----------CCCeEEECCCCchHHHHHHHHcCC-
Confidence            4556668999998654       468999999999888876532           456788899999999999999999 


Q ss_pred             CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH--hCCEEEeeccccchh
Q 010842          212 PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE--YGIWVHVDAAYAGSA  289 (499)
Q Consensus       212 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~--~~~~lhvD~A~g~~~  289 (499)
                        +++.+|.+++  +.+|+++|++++++.    ..+.+|+++.++|++|.+-|++++.++++.  +|+++++|++|+.+.
T Consensus       115 --~~~~~~~~~~--~~~d~~~l~~~l~~~----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~  186 (354)
T 3ly1_A          115 --KVTKVKMLDN--WAFDIEGLKAAVAAY----SGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFV  186 (354)
T ss_dssp             --EEEEECCCTT--SCCCHHHHHHHHHTC----SSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGC
T ss_pred             --EEEEecCCCC--CCCCHHHHHHHhccC----CCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhc
Confidence              9999998753  699999999999731    124578888999999999999998888887  999999999998764


Q ss_pred             ccCc--cchhhhcCCCCCceeEeccccccc-CCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCC
Q 010842          290 CICP--EFRHYLNGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR  366 (499)
Q Consensus       290 ~~~~--~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr  366 (499)
                      ....  ............+.++.++||+++ .+..+|+++.++ ... +.+...... .                     
T Consensus       187 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-~~~-~~~~~~~~~-~---------------------  242 (354)
T 3ly1_A          187 NDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHP-TVI-ALMGRYVAG-E---------------------  242 (354)
T ss_dssp             CCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCH-HHH-HHHGGGTTC-S---------------------
T ss_pred             cccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCH-HHH-HHHHHhcCC-C---------------------
Confidence            3211  111112222135588889999997 446688888743 322 332221110 0                     


Q ss_pred             CCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHH
Q 010842          367 RFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDW  445 (499)
Q Consensus       367 ~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~  445 (499)
                      ....+..+++...+. .+.++++.++..++++++.+.|++. ++++. ++..+.+++.+.. .          ..++.+.
T Consensus       243 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~-~~~~~~~~~~~~~-~----------~~~~~~~  309 (354)
T 3ly1_A          243 KINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALEDL-KLPYL-PSEGNFVFHQLVV-P----------LKDYQTH  309 (354)
T ss_dssp             CCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCCSSEEEEECSS-C----------HHHHHHH
T ss_pred             CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCCceEEEEECCC-C----------HHHHHHH
Confidence            112344444444442 3567888888999999999999887 77765 4555666666643 1          4567777


Q ss_pred             HHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          446 VNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       446 l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      |.++|+. +.+....+..++|++++    +++|+++++++|+++.++
T Consensus       310 l~~~gi~-v~g~~~~~~~~iRis~~----~~~~i~~~~~~l~~~l~~  351 (354)
T 3ly1_A          310 MADAGVL-IGRAFPPADNWCRISLG----TPQEMQWVADTMREFRKK  351 (354)
T ss_dssp             HHHTTEE-CCCCCTTCTTEEEEECC----CHHHHHHHHHHHHHHHHT
T ss_pred             HHHCCEE-EeecCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHHh
Confidence            7778854 33222234578999984    789999999999987653

>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A

Probab=99.91  E-value=1.1e-21  Score=196.81  Aligned_cols=293  Identities=14%  Similarity=0.046  Sum_probs=207.7

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~  206 (499)
                      ..++++++.+|+.+.+|++...     ...++|+|+++|+..++.+..+           ++..|+++..+|.++..+++
T Consensus        71 ~~~l~~~la~~l~~~~g~~~~~-----~~v~~~~G~~~al~~~~~~l~~-----------~gd~Vl~~~~~y~~~~~~~~  134 (369)
T 3cq5_A           71 AVELRDELAAYITKQTGVAVTR-----DNLWAANGSNEILQQLLQAFGG-----------PGRTALGFQPSYSMHPILAK  134 (369)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCS-----------TTCEEEEEESSCTHHHHHHH
T ss_pred             HHHHHHHHHHhhhhcccCCCCh-----HhEEECCChHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHH
Confidence            3689999999999887764211     1468899999988777776532           45678889999999999999


Q ss_pred             HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842          207 LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA  286 (499)
Q Consensus       207 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g  286 (499)
                      ..|.   +++.+|.+.  +|.+|+++|++++++.     .+.+|+++.++|++|.+.|++++.++|+.+++++++|++|+
T Consensus       135 ~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~-----~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~  204 (369)
T 3cq5_A          135 GTHT---EFIAVSRGA--DFRIDMDVALEEIRAK-----QPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYA  204 (369)
T ss_dssp             HTTC---EEEEEECCT--TSSCCHHHHHHHHHHH-----CCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTG
T ss_pred             HcCC---EEEEecCCc--CCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCch
Confidence            9999   999999764  4689999999999762     13367778999999999999999999999999999999998


Q ss_pred             chhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCC
Q 010842          287 GSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTG  365 (499)
Q Consensus       287 ~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s  365 (499)
                      .+... +............+.++.+.||+++.| ..+|+++++++ .. +.+......                +    +
T Consensus       205 ~~~~~-~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-~~-~~l~~~~~~----------------~----~  261 (369)
T 3cq5_A          205 EFSPS-PSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANPA-FI-DAVMLVRLP----------------Y----H  261 (369)
T ss_dssp             GGCCS-CCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECTH-HH-HHHHTTSCT----------------T----C
T ss_pred             hhcCC-cchHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCHH-HH-HHHHHcCCC----------------C----C
Confidence            76532 111111122111457889999999744 45799888653 22 333221110                0    0


Q ss_pred             CCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHH
Q 010842          366 RRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLD  444 (499)
Q Consensus       366 r~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~  444 (499)
                        ...+..+++...+. .+.+++..++..++++++.+.|++. ++++. ++..+++++.+. ..          ..++.+
T Consensus       262 --~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~-~~----------~~~l~~  326 (369)
T 3cq5_A          262 --LSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEEL-GYAVV-PSESNFVFFGDF-SD----------QHAAWQ  326 (369)
T ss_dssp             --SCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHHH-TCEEE-CCSSSEEEEECC-SS----------HHHHHH
T ss_pred             --CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEC-CCCCeEEEEECC-CC----------HHHHHH
Confidence              12344444444442 3457778888889999999999884 78876 555567777664 11          345677


Q ss_pred             HHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          445 WVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       445 ~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      +|.++|+.+ .+.  ....++|+++.    +++|+++++++|+++.
T Consensus       327 ~l~~~gi~v-~~~--~~~~~iRis~~----~~~~i~~~~~~l~~~~  365 (369)
T 3cq5_A          327 AFLDRGVLI-RDV--GIAGHLRTTIG----VPEENDAFLDAAAEII  365 (369)
T ss_dssp             HHHHTTEEC-BCC--SCTTEEEEECC----CHHHHHHHHHHHHHHH
T ss_pred             HHHHCCEEE-EEC--CCCCeEEEEeC----CHHHHHHHHHHHHHHH
Confidence            777778543 333  22467999984    7899999999998875

>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*

Probab=99.90  E-value=4e-23  Score=209.56  Aligned_cols=341  Identities=14%  Similarity=0.019  Sum_probs=213.7

Q ss_pred             ccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEE-cCChHHHHHH
Q 010842           90 PNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVI-QNTTSDSILV  168 (499)
Q Consensus        90 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~A~~~  168 (499)
                      |..+.+.+++..+|..+.+.+....+........+|....+.+++++++++++|.+...      ..++ |+|||+|+..
T Consensus        39 ~~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~------~i~~~t~g~t~al~~  112 (398)
T 2fyf_A           39 PRDGRFGSGPSKVRLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGY------EVILGNGGATAFWDA  112 (398)
T ss_dssp             CSSCBCCSSSCCCCHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTC------EEEEEETCHHHHHHH
T ss_pred             cCCccccCCCCCCCHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEeCCchhHHHHH
Confidence            33444555555555444444443211111111235666677888999999999997421      3577 9999999998


Q ss_pred             HHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-HHHHHHHh--CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCC
Q 010842          169 TLIAARDRALDAVGAENMHKLVVYGSDQTHST-FAKVCKLA--GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGL  245 (499)
Q Consensus       169 al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-~~ka~~~~--G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~  245 (499)
                      ++.+..+           ++ +++++...|.. +...+...  |.   .++.||++ ++ +..+.+     +.      .
T Consensus       113 ~~~~l~~-----------~g-v~~v~~~~~~~~~~~~~~~~~~g~---~~~~v~~~-~g-~~~~~~-----i~------~  164 (398)
T 2fyf_A          113 AAFGLID-----------KR-SLHLTYGEFSAKFASAVSKNPFVG---EPIIITSD-PG-SAPEPQ-----TD------P  164 (398)
T ss_dssp             HHHHTCS-----------SC-EEEEECSHHHHHHHHHHHHCTTSC---CCEEEECC-TT-CCCCCC-----CC------T
T ss_pred             HHHHhcC-----------CC-eEEEeCCHHHHHHHHHHHHhCCCC---ceEEEecC-CC-CCCCcc-----cc------C
Confidence            8877631           33 23334444532 23345666  56   88899987 33 333321     22      2


Q ss_pred             ccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEE
Q 010842          246 VPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCL  325 (499)
Q Consensus       246 ~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l  325 (499)
                      ++.+|++++++|+||.+.|+++|.++   +|+|+|+|++|+.+....+        +..+|++++++||+++.|.++|++
T Consensus       165 ~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~--------~~~~di~~~s~sK~~~~~gg~g~l  233 (398)
T 2fyf_A          165 SVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVD--------IAETDAYYFAPQKNFASDGGLWLA  233 (398)
T ss_dssp             TCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCC--------GGGCSEEEECTTSTTCSCSSEEEE
T ss_pred             CCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccC--------cccCcEEEEecCcccCCCCceEEE
Confidence            34578888999999999999999887   8999999999986643221        123899999999999988678888


Q ss_pred             EEeCchhHHHhh------cCCccCCCCCCCCCCCcccC--CCcccCCCCCC-CcHHHHHHHHHhcHHH-HHHHHHHHHHH
Q 010842          326 WVKQPGLLVKAL------STDPEYLKNKPSESNSVVDF--KDWQVGTGRRF-KSLRLWMVLRSYGVLN-LQSHIRSDIRL  395 (499)
Q Consensus       326 ~~r~~~~l~~~~------~~~~~yl~~~~~~~~~~~~~--~~~~~~~sr~~-~al~~~~~l~~~g~~g-~~~~~~~~~~~  395 (499)
                      +++++. +....      ...+.|+.....     ...  ..... .+... ....+..+++.+...| ++++.++..++
T Consensus       234 ~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~  306 (398)
T 2fyf_A          234 IMSPAA-LSRIEAIAATGRWVPDFLSLPIA-----VENSLKNQTY-NTPAIATLALLAEQIDWLVGNGGLDWAVKRTADS  306 (398)
T ss_dssp             EECHHH-HHHHHHHHHTTCCCCGGGCHHHH-----HHHHTTTCCS-SCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred             EECHHH-HHHhhcccccCCCCCcEEehHHH-----hhhcccCCCC-CCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence            887642 22111      001223221100     000  00000 11111 1224455666555555 88999999999


Q ss_pred             HHHHHHHHhcCCCeEEEc-CC--Cce-EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccC
Q 010842          396 AKMFEGFVKSDPRFEIVV-PR--HFA-LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGA  471 (499)
Q Consensus       396 a~~l~~~L~~~~~~~~~~-~~--~~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~  471 (499)
                      ++++.+.|+++|+++++. +|  ..+ +++|++....         ...++.++|.++|+.+..+....+..++|+++. 
T Consensus       307 ~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~l~~~L~~~gI~v~~g~~~~~~~~iRis~~-  376 (398)
T 2fyf_A          307 SQRLYSWAQERPYTTPFVTDPGLRSQVVGTIDFVDDV---------DAGTVAKILRANGIVDTEPYRKLGRNQLRVAMF-  376 (398)
T ss_dssp             HHHHHHHHHHSTTEEESCCSGGGBCSSEEEEEECTTS---------CHHHHHHHHHHTTCBCCSCCTTTCSSEEEEECC-
T ss_pred             HHHHHHHHHHcCCceeccCChhhcCCcEEEEECCCCC---------CHHHHHHHHHHCCcEEecCcccCCCCEEEEEec-
Confidence            999999999998999874 23  345 7888874310         145677888888865433211123467999996 


Q ss_pred             CCCcHHHHHHHHHHHHHHHHH
Q 010842          472 SLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       472 ~~~t~~di~~l~~~l~~~~~~  492 (499)
                      ..+|++|+++++++|+++.++
T Consensus       377 ~~~t~e~i~~~~~~l~~~l~~  397 (398)
T 2fyf_A          377 PAVEPDDVSALTECVDWVVER  397 (398)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHHHh
Confidence            678999999999999988654

>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}

Probab=99.90  E-value=2.8e-22  Score=200.70  Aligned_cols=309  Identities=12%  Similarity=0.067  Sum_probs=212.1

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ..+.+.+...+.. ...|.... ..++++    .+++++|.+.+       ..++|+|||+|+..++.+..+        
T Consensus        46 ~~v~~a~~~~~~~-~~~y~~~~-~~~lr~----~la~~~~~~~~-------~v~~~~g~~~a~~~~~~~l~~--------  104 (365)
T 3get_A           46 PKAIECLRQNANK-AHLYPDDS-MIELKS----TLAQKYKVQNE-------NIIIGAGSDQVIEFAIHSKLN--------  104 (365)
T ss_dssp             HHHHHHHHHHGGG-TTSCCCTT-CHHHHH----HHHHHHTCCGG-------GEEEESSHHHHHHHHHHHHCC--------
T ss_pred             HHHHHHHHHHHHh-hccCCCCC-hHHHHH----HHHHHhCCCcc-------eEEECCCHHHHHHHHHHHHhC--------
Confidence            3444555555542 23333222 244444    48888887654       469999999999888776532        


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD  263 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id  263 (499)
                         ++..|+++..+|.++...++..|.   +++.+|++. .++ +|+++|+++++++      +.+|+++.++|++|.+-
T Consensus       105 ---~gd~vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~-~~~-~d~~~l~~~l~~~------~~~v~~~~p~nptG~~~  170 (365)
T 3get_A          105 ---SKNAFLQAGVTFAMYEIYAKQCGA---KCYKTQSIT-HNL-DEFKKLYETHKDE------IKLIFLCLPNNPLGECL  170 (365)
T ss_dssp             ---TTCEEEECSSCCTHHHHHHHHHTC---EEEECSSSS-CCH-HHHHHHHHHTTTT------EEEEEEESSCTTTCCCC
T ss_pred             ---CCCEEEEeCCChHHHHHHHHHcCC---EEEEEecCC-CCC-CCHHHHHHHhCCC------CCEEEEcCCCCCCCCCc
Confidence               466788999999999999999999   999999832 357 9999999998643      44788889999999999


Q ss_pred             ChhHHHHHHH--HhCCEEEeeccccchhc--cCcc---chhhhcCCCCCceeEecccccccC-CCcceEEEEeCchhHHH
Q 010842          264 NVEPLAEVAN--EYGIWVHVDAAYAGSAC--ICPE---FRHYLNGIERVDSFSFSPHKWLLS-YLDCCCLWVKQPGLLVK  335 (499)
Q Consensus       264 ~l~~I~~ia~--~~~~~lhvD~A~g~~~~--~~~~---~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~~l~~  335 (499)
                      |++++.++++  ++|+++++|++|+.+.+  ....   ..... +....+.++.+.||+++. +..+|+++. +++.. +
T Consensus       171 ~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~-~  247 (365)
T 3get_A          171 DASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELI-KEFDNVLYLGTFSKLYGLGGLRIGYGIA-NANII-S  247 (365)
T ss_dssp             CHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHH-HHCTTEEEEEESSSTTSCTTTCCEEEEE-CHHHH-H
T ss_pred             CHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHh-ccCCCEEEEeecchHhcCcchheEEEEc-CHHHH-H
Confidence            9999999888  67999999999986652  1111   11111 111356788899999974 456888887 43332 2


Q ss_pred             hhcC-CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          336 ALST-DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       336 ~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                      .+.. ...|                       ....+..+++...+ ..+++++..++..++++++.+.|++. ++++. 
T Consensus       248 ~~~~~~~~~-----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~-  302 (365)
T 3get_A          248 AFYKLRAPF-----------------------NVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH-NIKII-  302 (365)
T ss_dssp             HHHHHSCTT-----------------------CSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEC-
T ss_pred             HHHHhcCCC-----------------------CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEC-
Confidence            2211 1100                       01234444444443 23668888899999999999999998 88875 


Q ss_pred             CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      ++..+.+.+.+....          ..++.+.|.++|+.+..+..+. ..++|++++    +++|+++++++|+++.
T Consensus       303 ~~~~~~~~~~~~~~~----------~~~~~~~l~~~gi~v~~g~~~~-~~~iRis~~----~~~~i~~l~~~l~~~l  364 (365)
T 3get_A          303 DSYTNFITYFFDEKN----------STDLSEKLLKKGIIIRNLKSYG-LNAIRITIG----TSYENEKFFTEFDKIL  364 (365)
T ss_dssp             CCSSSEEEEECSSSC----------HHHHHHHHHTTTEECEECGGGT-CSEEEEECC----CHHHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEECCCCC----------HHHHHHHHHHCCEEEEECccCC-CCEEEEEcC----CHHHHHHHHHHHHHHh
Confidence            455566666664311          4567788888885544433333 678999984    7899999999998864

>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}

Probab=99.90  E-value=1.2e-22  Score=204.04  Aligned_cols=323  Identities=11%  Similarity=0.018  Sum_probs=216.7

Q ss_pred             HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842          105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE  184 (499)
Q Consensus       105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~  184 (499)
                      .+.+.+...+......|.. .. .++++++.+++.+.+|.+...     ...++|+|||+|+..++.+..+         
T Consensus        40 ~v~~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~-----~~i~~t~g~~~a~~~~~~~~~~---------  103 (377)
T 3fdb_A           40 AVLQAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQARP-----EWIFPIPDVVRGLYIAIDHFTP---------  103 (377)
T ss_dssp             HHHHHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHSC---------
T ss_pred             HHHHHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCH-----HHEEEeCChHHHHHHHHHHhcC---------
Confidence            3445555555433344544 34 789999999999888864321     2469999999999888876532         


Q ss_pred             ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842          185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN  264 (499)
Q Consensus       185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~  264 (499)
                        ++..|+++..+|.++..+++..|.   +++.+|++.+    +|+++|++++++++      .+|+++.++|++|.+-|
T Consensus       104 --~gd~vl~~~~~~~~~~~~~~~~g~---~~~~~~~~~~----~d~~~l~~~l~~~~------~~v~i~~p~nptG~~~~  168 (377)
T 3fdb_A          104 --AQSKVIVPTPAYPPFFHLLSATQR---EGIFIDATGG----INLHDVEKGFQAGA------RSILLCNPYNPLGMVFA  168 (377)
T ss_dssp             --TTCCEEEEESCCTHHHHHHHHHTC---CEEEEECTTS----CCHHHHHHHHHTTC------CEEEEESSBTTTTBCCC
T ss_pred             --CCCEEEEcCCCcHhHHHHHHHcCC---EEEEccCCCC----CCHHHHHHHhccCC------CEEEEeCCCCCCCCCCC
Confidence              456688888999999999999999   9999998753    99999999997643      37888899999999964


Q ss_pred             ---hhHHHHHHHHhCCEEEeeccccchhccC-ccchhhhcCC--CCCceeEecccccccCC-CcceEEEEeCchhHHHhh
Q 010842          265 ---VEPLAEVANEYGIWVHVDAAYAGSACIC-PEFRHYLNGI--ERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKAL  337 (499)
Q Consensus       265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~-~~~~~~~~g~--~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~  337 (499)
                         +++|+++|++||+++++|++|+.+.... ...... ..+  ...+.+..+.+|+++.| ..+|++++.++... +.+
T Consensus       169 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~-~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~-~~~  246 (377)
T 3fdb_A          169 PEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAG-VSDTAASVCITITAPSKAWNIAGLKCAQIIFSNPSDA-EHW  246 (377)
T ss_dssp             HHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGG-SCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSHHHH-HHH
T ss_pred             HHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccH-HHccCCCcEEEEEeChHhccCcchhheEEEeCCHHHH-HHH
Confidence               6777788999999999999998754322 111111 111  11346788999999644 56787777665433 222


Q ss_pred             cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEcC
Q 010842          338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEIVVP  414 (499)
Q Consensus       338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~  414 (499)
                      .....+..                    .....+..+++...+  +.+.++++.++..++++++.+.|++ +|++++..+
T Consensus       247 ~~~~~~~~--------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~  306 (377)
T 3fdb_A          247 QQLSPVIK--------------------DGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHDFLLHEIPKRIPGAKITPM  306 (377)
T ss_dssp             HHSCHHHH--------------------CCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCEECCC
T ss_pred             HHHHHhhc--------------------CCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhhCCCceEecC
Confidence            11111100                    011233344433333  3466788889999999999999988 889988744


Q ss_pred             CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      .....+++.+.....         ..++.+.+.++ |+.+..+..+.  +..++|++++   +++++|++++++|.++.+
T Consensus       307 ~~~~~~~~~~~~~~~---------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~---~~~e~i~~~l~~l~~~l~  374 (377)
T 3fdb_A          307 QATYLMWIDFRDTTI---------EGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFA---TSREVLEEAIDRMAKAVS  374 (377)
T ss_dssp             SBCSEEEEECTTSCC---------CSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHHHHHT
T ss_pred             CeeEEEEEECcccCC---------CHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeC---CCHHHHHHHHHHHHHHHh
Confidence            433333455544210         12345555554 75444333332  2478999986   489999999999998765


Q ss_pred             H
Q 010842          492 R  492 (499)
Q Consensus       492 ~  492 (499)
                      +
T Consensus       375 ~  375 (377)
T 3fdb_A          375 H  375 (377)
T ss_dssp             T
T ss_pred             h
Confidence            4

>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0

Probab=99.90  E-value=7.4e-22  Score=197.15  Aligned_cols=291  Identities=12%  Similarity=0.027  Sum_probs=204.5

Q ss_pred             hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842          125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka  204 (499)
                      +...++++.    +++++|.+.+       ..++|+|||+|+..++.++               ..|+++..+|.++..+
T Consensus        61 ~~~~~l~~~----la~~~~~~~~-------~i~~~~g~t~al~~~~~~~---------------d~vi~~~~~~~~~~~~  114 (361)
T 3ftb_A           61 VNYRRLNKS----IENYLKLKDI-------GIVLGNGASEIIELSISLF---------------EKILIIVPSYAEYEIN  114 (361)
T ss_dssp             TTCHHHHHH----HHHHHTCCSC-------EEEEESSHHHHHHHHHTTC---------------SEEEEEESCCTHHHHH
T ss_pred             ccHHHHHHH----HHHHhCCCcc-------eEEEcCCHHHHHHHHHHHc---------------CcEEEecCChHHHHHH
Confidence            444555554    7777887654       3689999999998887755               2488888999999999


Q ss_pred             HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEEe
Q 010842          205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVHV  281 (499)
Q Consensus       205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lhv  281 (499)
                      ++..|.   +++.+|+++++  .+++++|++++++ +      .+|+++.++|++|.+-|   +++|+++|++||+++++
T Consensus       115 ~~~~g~---~~~~~~~~~~~--~~~~~~l~~~l~~-~------~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~  182 (361)
T 3ftb_A          115 AKKHGV---SVVFSYLDENM--CIDYEDIISKIDD-V------DSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIII  182 (361)
T ss_dssp             HHHTTC---EEEEEECCTTS--CCCHHHHHHHTTT-C------SEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred             HHHcCC---eEEEeecCccc--CCCHHHHHHhccC-C------CEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEE
Confidence            999999   99999998765  6788999998865 3      37888999999999965   67788888899999999


Q ss_pred             eccccchhccCccchh-hhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842          282 DAAYAGSACICPEFRH-YLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD  359 (499)
Q Consensus       282 D~A~g~~~~~~~~~~~-~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  359 (499)
                      |++|+.+... ..... ...+......++.+.+|+++.| ..+|++++.++... +.+.......               
T Consensus       183 De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~-~~~~~~~~~~---------------  245 (361)
T 3ftb_A          183 DEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIA-AKIKAKQNPW---------------  245 (361)
T ss_dssp             ECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHH-HHHHTTSCTT---------------
T ss_pred             ECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHH-HHHHhhCCCC---------------
Confidence            9999876542 11110 0111112346677999999744 56788875665543 2222111000               


Q ss_pred             cccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEcCCCceEEEEEecCCCCCCcchhHH
Q 010842          360 WQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFE-IVVPRHFALVCFRLNPYPHSGSADTEM  437 (499)
Q Consensus       360 ~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~~~~~v~f~~~~~~~~~~~~~~~  437 (499)
                             ....+..+++...+. .+++++..++..++++++.+.|+++|+++ +. ++..+.+.+++....         
T Consensus       246 -------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~---------  308 (361)
T 3ftb_A          246 -------NINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIKRVF-SPHANFVLCRLENIS---------  308 (361)
T ss_dssp             -------CSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEE-CCSSSEEEEEESSSC---------
T ss_pred             -------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCceec-CCCCeEEEEEcCCCC---------
Confidence                   112344444444442 46678888899999999999999999998 65 555667777775422         


Q ss_pred             HHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          438 LNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       438 ~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                       ..++.+.|.++|+.+..+..+.  +..++|++++    +.+++++++++|+++.+.
T Consensus       309 -~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~~  360 (361)
T 3ftb_A          309 -GEKLYDSLLKEDIVIRRCCNFIGLDDSFVRFAIK----DEKKNTKFLRALKGVENN  360 (361)
T ss_dssp             -HHHHHHHHHTTTEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHHHT
T ss_pred             -HHHHHHHHHHCCeEEeeCccCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHhc
Confidence             4567888888885544433332  2468999984    788999999999887653

>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A

Probab=99.90  E-value=5e-22  Score=202.16  Aligned_cols=290  Identities=12%  Similarity=0.098  Sum_probs=201.8

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      ....++.+++++++|.+..         +++++||+||..++.+..+           ++..|+++...|.++..++...
T Consensus       104 ~~~~~l~~~la~~~g~~~~---------i~~~sGt~a~~~~l~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~  163 (409)
T 3kki_A          104 YDKPMIEKRLAKFTGFDEC---------LLSQSGWNANVGLLQTICQ-----------PNTNVYIDFFAHMSLWEGARYA  163 (409)
T ss_dssp             TTSCHHHHHHHHHHTCSEE---------EEESCHHHHHHHHHHHHCC-----------TTCEEEEETTSCHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCeE---------EEecchHHHHHHHHHHhcC-----------CCCEEEECCCcCHHHHHHHHHc
Confidence            3444556668888888654         7778889999888876532           5678889999999999999999


Q ss_pred             CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccch
Q 010842          209 GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGS  288 (499)
Q Consensus       209 G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~  288 (499)
                      |.   +++.++.       +|+++|++++++..     +.+|+++.++|++|.+.|+++|+++|++||+|+++|++|+++
T Consensus       164 g~---~~~~~~~-------~d~~~le~~l~~~~-----~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g  228 (409)
T 3kki_A          164 NA---QAHPFMH-------NNCDHLRMLIQRHG-----PGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLG  228 (409)
T ss_dssp             TC---EEEEECT-------TCHHHHHHHHHHHC-----SCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTT
T ss_pred             CC---eEEEecC-------CCHHHHHHHHHhcC-----CeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCcccc
Confidence            98   7777653       58999999998642     247888899999999999999999999999999999999875


Q ss_pred             hccCccchh--hhcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCC
Q 010842          289 ACICPEFRH--YLNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGT  364 (499)
Q Consensus       289 ~~~~~~~~~--~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~  364 (499)
                      .+. +....  ...++ ...|.++.+.+|+++.+  .|+++.++. .. +.+.. ...+...                 .
T Consensus       229 ~~g-~~g~~~~~~~~~~~~~di~~~s~sK~~~~~--gg~v~~~~~-~~-~~~~~~~~~~~~~-----------------~  286 (409)
T 3kki_A          229 THG-PNGAGLLAELGLTREVHFMTASLAKTFAYR--AGAIWCNNE-VN-RCVPFISYPAIFS-----------------S  286 (409)
T ss_dssp             TSS-GGGCCHHHHHTCGGGCSEEEEESSSTTCSS--CEEEEESSS-GG-GTHHHHCHHHHHS-----------------B
T ss_pred             ccC-CCCCcchhhcCCCCCCCEEEeecchhhCCC--ceEEEECHH-HH-HHHHHhCcCcccc-----------------C
Confidence            431 11111  11122 35789999999999866  477666543 22 11111 1111111                 0


Q ss_pred             CCCCCcHH---HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHH
Q 010842          365 GRRFKSLR---LWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRK  441 (499)
Q Consensus       365 sr~~~al~---~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~  441 (499)
                        ....+.   +..++..+  +..+++.++..++++++.+.|++. ++++.  +..+++.+.+..         .....+
T Consensus       287 --~~~~~~~aa~~aal~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~--~~~~~~~~~~~~---------~~~~~~  350 (409)
T 3kki_A          287 --TLLPYEAAGLETTLEII--ESADNRRQHLDRMARKLRIGLSQL-GLTIR--SESQIIGLETGD---------ERNTEK  350 (409)
T ss_dssp             --CCCHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHTT-TCCCC--CSSSEEEEEEES---------HHHHHH
T ss_pred             --CCcHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCccC--CCCCEEEEEeCC---------HHHHHH
Confidence              112222   23334333  222567778889999999999987 67654  355667777654         223456


Q ss_pred             HHHHHHhcCCEEEEee---eECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          442 LLDWVNSTGRVYLTHT---IVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       442 l~~~l~~~g~~~~~~~---~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      +.++|.++|+.+....   ...+..++|+++. ..+|++||++++++|+++.+.
T Consensus       351 ~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~-~~~t~e~i~~~~~~l~~~l~~  403 (409)
T 3kki_A          351 VRDYLESNGVFGSVFCRPATSKNKNIIRLSLN-SDVNDEQIAKIIEVCSDAVNY  403 (409)
T ss_dssp             HHHHHHHTTEECEEECTTSSCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCceEeeeCCCCcCCCCcEEEEEcc-CCCCHHHHHHHHHHHHHHHhc
Confidence            8888888885432211   1235688999995 778999999999999998765

>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}

Probab=99.90  E-value=2.2e-23  Score=211.71  Aligned_cols=307  Identities=13%  Similarity=0.059  Sum_probs=204.9

Q ss_pred             hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH---
Q 010842          125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF---  201 (499)
Q Consensus       125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~---  201 (499)
                      +....+|+.+++++++++|.+...        +++++||+|+..++.++..           ++..|+++..+|.++   
T Consensus        65 ~~~~~~e~~ar~~la~~~g~~~~~--------i~~~sGt~a~~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~  125 (407)
T 2dkj_A           65 EVIDRVESLAIERAKALFGAAWAN--------VQPHSGSQANMAVYMALME-----------PGDTLMGMDLAAGGHLTH  125 (407)
T ss_dssp             HHHHHHHHHHHHHHHHHHTCSEEE--------CCCSSHHHHHHHHHHHHCC-----------TTCEEEEECGGGTCCGGG
T ss_pred             hHHHHHHHHHHHHHHHHhCCCcce--------EEecchHHHHHHHHHHhcC-----------CCCEEEEecccccCccch
Confidence            434477877778999999987542        5666778898888877632           456788888899877   


Q ss_pred             HHHHHHhCCCCCCeEEeeC--CCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842          202 AKVCKLAGVSPANIRALPT--SVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV  279 (499)
Q Consensus       202 ~ka~~~~G~g~~~v~~v~~--~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l  279 (499)
                      ..+++..|.   .++.+++  ++ .++.+|+++|++++++.     .+.+|+++.+++  |.+.|+++|.++|++||+++
T Consensus       126 ~~~~~~~g~---~~~~~~~~~~~-~~~~~d~~~l~~~l~~~-----~~~~v~~~~p~~--~~~~~l~~i~~l~~~~~~~l  194 (407)
T 2dkj_A          126 GSRVNFSGK---LYKVVSYGVRP-DTELIDLEEVRRLALEH-----RPKVIVAGASAY--PRFWDFKAFREIADEVGAYL  194 (407)
T ss_dssp             TCTTSHHHH---HSEEEEECCCT-TTSSCCHHHHHHHHHHH-----CCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEE
T ss_pred             HHHHHhcCc---eEEEEecCCCc-ccCccCHHHHHHHHhhc-----CCeEEEEecccc--CCCCCHHHHHHHHHHcCCEE
Confidence            455556665   4455555  32 24789999999999752     123566655555  47889999999999999999


Q ss_pred             EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842          280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD  359 (499)
Q Consensus       280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  359 (499)
                      ++|++|+.+....+....   .++..|.++.++||++.++.+ |++++++++...........+..              
T Consensus       195 i~Dea~~~g~~~~~~~~~---~~~~~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~l~~~~~~~~~--------------  256 (407)
T 2dkj_A          195 VVDMAHFAGLVAAGLHPN---PLPYAHVVTSTTHKTLRGPRG-GLILSNDPELGKRIDKLIFPGIQ--------------  256 (407)
T ss_dssp             EEECTTTHHHHHTTCSCC---CTTTCSEEEEESSGGGCCCSC-EEEEESCHHHHHHHHHHHTTTTC--------------
T ss_pred             EEEccccccccccCccCC---ccccccEEEEeccccCCCCCc-eEEEECCHHHHHHHHhhhccccc--------------
Confidence            999999874433222111   122479999999999987765 88888754433211111101100              


Q ss_pred             cccCCCCCCC-cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcchhHH
Q 010842          360 WQVGTGRRFK-SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSADTEM  437 (499)
Q Consensus       360 ~~~~~sr~~~-al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~  437 (499)
                          .+.... ...+..++..+..++++++.++..++++++.+.|++. +++++.+ +..+++++.+....        .
T Consensus       257 ----~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~--------~  323 (407)
T 2dkj_A          257 ----GGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GYRIVTGGTDNHLFLVDLRPKG--------L  323 (407)
T ss_dssp             ----SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT--------C
T ss_pred             ----CCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecCCCCceEEEEECcccC--------C
Confidence                000001 1133445555445778899999999999999999998 8888753 45677777775311        0


Q ss_pred             HHHHHHHHHHhcCCEEEEeee------ECCEEEEEEeccCC---CCcHHHHHHHHHHHHHHHHH
Q 010842          438 LNRKLLDWVNSTGRVYLTHTI------VGGLYMLRFAVGAS---LTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       438 ~~~~l~~~l~~~g~~~~~~~~------~~g~~~lRi~~~~~---~~t~~di~~l~~~l~~~~~~  492 (499)
                      ....+.+.|.+.|+.+..+..      .....++|+++..+   ..|++|+++++++|+++.++
T Consensus       324 ~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~  387 (407)
T 2dkj_A          324 TGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE  387 (407)
T ss_dssp             CHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence            134567777777854433221      11245799998521   37899999999999998776

>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}

Probab=99.90  E-value=1.4e-22  Score=206.55  Aligned_cols=335  Identities=12%  Similarity=0.068  Sum_probs=219.3

Q ss_pred             HHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          104 GFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       104 ~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      ..+.+.+...+... ...|...++..++++++.+|+.+.+|.+...    ....++|+|||+|+..++.+...       
T Consensus        53 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~----~~~v~~t~g~~~a~~~~~~~~~~-------  121 (412)
T 2x5d_A           53 PHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDP----ESEAIVTIGSKEGLAHLMLATLD-------  121 (412)
T ss_dssp             HHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCT----TTSEEEESCHHHHHHHHHHHHCC-------
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CcCEEEcCChHHHHHHHHHHhCC-------
Confidence            34555555555432 2345545667899999999998888863110    00369999999999988877532       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|+++..+|.++...++..|.   +++.+|.+++++|.+|+++|+++++++      +.+|+++.++|+||.+
T Consensus       122 ----~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~i~~~------~~~v~l~~p~nptG~~  188 (412)
T 2x5d_A          122 ----HGDTILVPNPSYPIHIYGAVIAGA---QVRSVPLVPGIDFFNELERAIRESIPK------PRMMILGFPSNPTAQC  188 (412)
T ss_dssp             ----TTCEEEEEESCCHHHHHHHHHHTC---EEEEEECSTTSCHHHHHHHHHHTEESC------CSEEEEESSCTTTCCC
T ss_pred             ----CCCEEEEcCCCchhHHHHHHHcCC---EEEEeecCCccCCCCCHHHHHHhcccC------ceEEEECCCCCCCCCc
Confidence                456788899999999999999999   999999986534678999999887532      3367778999999999


Q ss_pred             CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842          263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA  336 (499)
Q Consensus       263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~  336 (499)
                      -|   +++|+++|++||+++++|++|+.+.+........  +.+....|.++.++||+++.| ..+|+++.++ ... +.
T Consensus       189 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~-~~  266 (412)
T 2x5d_A          189 VELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMAGWRIGFMVGNP-ELV-SA  266 (412)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCTTSCCEEEEECH-HHH-HH
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCcccceEEEEcCH-HHH-HH
Confidence            65   6889999999999999999998865322111111  111124688899999999744 4579988753 222 22


Q ss_pred             hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842          337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP  414 (499)
Q Consensus       337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~  414 (499)
                      +.....+..                    .....+..+++...+  +.+.++++.++..++++++.+.|++. ++++. +
T Consensus       267 l~~~~~~~~--------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~  324 (412)
T 2x5d_A          267 LARIKSYHD--------------------YGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA-GWMVE-N  324 (412)
T ss_dssp             HHHHHHHHC--------------------CCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHH-TCCCC-C
T ss_pred             HHHHHhhhc--------------------cCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEec-C
Confidence            211100000                    001233334433333  34667888888899999999999887 77765 3


Q ss_pred             CCce-EEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          415 RHFA-LVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       415 ~~~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      +..+ .+++.+...-  .    .....++.++|.+ .|+.+..+..+.  +..++|++++ .  ++++|+++++.|.++.
T Consensus       325 ~~~g~~~~~~~~~~~--~----~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~-~--~~~~l~~~l~~l~~~l  395 (412)
T 2x5d_A          325 PKASMYVWAKIPEPY--A----HLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALI-E--NRDRLRQAVRGIKAMF  395 (412)
T ss_dssp             CSBSSEEEEECCTTT--G----GGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC-S--CHHHHHHHHHHHHHHH
T ss_pred             CCeeeEEEEEcCCcc--C----CCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEec-C--CHHHHHHHHHHHHHHH
Confidence            4434 4555663210  0    0013566777754 586544433332  2467999996 3  7899999999999998


Q ss_pred             HHHhc
Q 010842          491 DRLFK  495 (499)
Q Consensus       491 ~~l~~  495 (499)
                      +++..
T Consensus       396 ~~~~~  400 (412)
T 2x5d_A          396 RADGL  400 (412)
T ss_dssp             HHTTC
T ss_pred             HhcCC
Confidence            77543

>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*

Probab=99.90  E-value=1.3e-22  Score=205.19  Aligned_cols=330  Identities=15%  Similarity=0.111  Sum_probs=210.0

Q ss_pred             HHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc
Q 010842          107 GEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM  186 (499)
Q Consensus       107 ~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~  186 (499)
                      .+.+...+...  .+..++...+++++    +++++|.+.         +++|+|||+|+..++.+.+-.          
T Consensus        23 ~~a~~~~~~~~--~~~~~~~~~~l~~~----la~~~~~~~---------~~~~~~gt~al~~~~~~~~~~----------   77 (393)
T 1mdo_A           23 LAAVKTVLDSG--WITTGPKNQELEAA----FCRLTGNQY---------AVAVSSATAGMHIALMALGIG----------   77 (393)
T ss_dssp             HHHHHHHHHHT--CCSSSHHHHHHHHH----HHHHHCCSE---------EEEESCHHHHHHHHHHHTTCC----------
T ss_pred             HHHHHHHHhcC--CcCCChHHHHHHHH----HHHHhCCCc---------EEEecChHHHHHHHHHHcCCC----------
Confidence            34455555432  12345666666666    777777653         489999999999888876211          


Q ss_pred             CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChh
Q 010842          187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVE  266 (499)
Q Consensus       187 ~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~  266 (499)
                      ++..|+++..+|.++..+++..|+   +++.+|++++ ++.+|+++|+++++++      +.+|+++   +++|.+.|++
T Consensus        78 ~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~~~---~~~G~~~~~~  144 (393)
T 1mdo_A           78 EGDEVITPSMTWVSTLNMIVLLGA---NPVMVDVDRD-TLMVTPEHIEAAITPQ------TKAIIPV---HYAGAPADLD  144 (393)
T ss_dssp             TTCEEEEESSSCHHHHHHHHHTTC---EEEEECBCTT-TCCBCHHHHHHHCCTT------EEEECCB---CGGGCCCCHH
T ss_pred             CCCEEEeCCCccHhHHHHHHHCCC---EEEEEeccCC-cCCCCHHHHHHhcCCC------ceEEEEe---CCCCCcCCHH
Confidence            456789999999999999999999   9999999864 3789999999998643      3355544   4799999999


Q ss_pred             HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccc--ccccCCCcceEEEEeCchhHHHhhcCCccCC
Q 010842          267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPH--KWLLSYLDCCCLWVKQPGLLVKALSTDPEYL  344 (499)
Q Consensus       267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~h--K~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl  344 (499)
                      +|.++|+++|+++++|++|+.+.....  +..  +.  .|.+++++|  |+++.+ .+|+++.++++.............
T Consensus       145 ~i~~l~~~~~~~li~D~a~~~g~~~~~--~~~--~~--~d~~~~S~~k~K~l~~~-~~g~~~~~~~~~~~~l~~~~~~~~  217 (393)
T 1mdo_A          145 AIYALGERYGIPVIEDAAHATGTSYKG--RHI--GA--RGTAIFSFHAIKNITCA-EGGIVVTDNPQFADKLRSLKFHGL  217 (393)
T ss_dssp             HHHHHHHHHTCCBCEECTTCTTCEETT--EET--TS--SSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHTBTTE
T ss_pred             HHHHHHHHcCCeEEEECccccCCeECC--eec--CC--CCeEEEeCCCCCccccc-cceEEEeCCHHHHHHHHHHHhcCC
Confidence            999999999999999999985433221  111  11  799999999  999754 567777765543322111110000


Q ss_pred             CCCCCCCCCcccCCCccc---CCC--CCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC----
Q 010842          345 KNKPSESNSVVDFKDWQV---GTG--RRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR----  415 (499)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~---~~s--r~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~----  415 (499)
                      ....  .........+..   ..+  .+...+...+++..  .+++++..++..++++++.+.|++.+ +++...+    
T Consensus       218 ~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~--l~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~  292 (393)
T 1mdo_A          218 GVDA--WDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQ--LQKLDALNARRAAIAAQYHQAMADLP-FQPLSLPSWEH  292 (393)
T ss_dssp             ECC-------------CCEESSCCCBCCCCHHHHHHHHHH--HHTHHHHHHHHHHHHHHHHHHHHTSS-CEECCCCSSCE
T ss_pred             cccc--hhhhcccccccccccccCccCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCC-cccccCCCCCC
Confidence            0000  000000000111   111  12334444444433  36678888999999999999999986 8875322    


Q ss_pred             --CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE----------------C-----CEEEEEEeccCC
Q 010842          416 --HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV----------------G-----GLYMLRFAVGAS  472 (499)
Q Consensus       416 --~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----------------~-----g~~~lRi~~~~~  472 (499)
                        ...++++++.+..      ......++.+.|.++|+.+..+...                .     +..++|+++. +
T Consensus       293 ~~~~~~~~v~~~~~~------~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~-~  365 (393)
T 1mdo_A          293 IHAWHLFIIRVDEAR------CGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLF-P  365 (393)
T ss_dssp             ECCCSCEEEECCHHH------HSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECCC-T
T ss_pred             CceeEEEEEEecccc------cccCHHHHHHHHHhCCCCcccccCccccChhhhccCCccCChhHHHHHhCEEEecCC-C
Confidence              2335677764200      0001456778888888643221110                0     1236999984 8


Q ss_pred             CCcHHHHHHHHHHHHHHHHHH
Q 010842          473 LTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       473 ~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .+|++|+++++++|+++.+..
T Consensus       366 ~~t~~~i~~~~~~l~~~~~~~  386 (393)
T 1mdo_A          366 DMTESDFDRVITALHQIAGQG  386 (393)
T ss_dssp             TCCHHHHHHHHHHHHHHHC--
T ss_pred             CCCHHHHHHHHHHHHHHHhcC
Confidence            899999999999999886543

>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*

Probab=99.90  E-value=1.8e-22  Score=203.59  Aligned_cols=291  Identities=10%  Similarity=0.051  Sum_probs=199.5

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      ....++.+.+++++|.+..         +++++||+|+..++.+..+           ++..|+++...|.++..+++..
T Consensus        84 ~~~~~l~~~la~~~g~~~~---------i~~~sGt~a~~~~~~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~  143 (384)
T 1bs0_A           84 VVHQALEEELAEWLGYSRA---------LLFISGFAANQAVIAAMMA-----------KEDRIAADRLSHASLLEAASLS  143 (384)
T ss_dssp             HHHHHHHHHHHHHHTCSEE---------EEESCHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhCCCcE---------EEeCCcHHHHHHHHHHhCC-----------CCcEEEEcccccHHHHHHHHHc
Confidence            3445555668888888643         7777789999888776522           4567888999999999999999


Q ss_pred             CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccch
Q 010842          209 GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGS  288 (499)
Q Consensus       209 G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~  288 (499)
                      |.   +++.+|.       +|+++|++.+++..   ..+.+|+...++|++|.+.|+++|.++|++||+++++|++|+.+
T Consensus       144 g~---~~~~~~~-------~d~~~l~~~l~~~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~  210 (384)
T 1bs0_A          144 PS---QLRRFAH-------NDVTHLARLLASPC---PGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTG  210 (384)
T ss_dssp             SS---EEEEECT-------TCHHHHHHHHHSCC---SSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred             CC---CEEEeCC-------CCHHHHHHHHHhcC---CCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccc
Confidence            98   8888873       48899999886531   12457788889999999999999999999999999999999755


Q ss_pred             hccCccchh--hhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCC
Q 010842          289 ACICPEFRH--YLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTG  365 (499)
Q Consensus       289 ~~~~~~~~~--~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~s  365 (499)
                      ... +....  ...+ ...|.++.++||+++ |.| |+++.++ +.. +.+.. ...|..                   +
T Consensus       211 ~~~-~~~~~~~~~~~-~~~di~~~s~sK~~~-~~G-G~~~~~~-~~~-~~l~~~~~~~~~-------------------~  265 (384)
T 1bs0_A          211 VIG-EQGRGSCWLQK-VKPELLVVTFGKGFG-VSG-AAVLCSS-TVA-DYLLQFARHLIY-------------------S  265 (384)
T ss_dssp             TSS-GGGCCHHHHTT-CCCSEEEEESSSTTS-SCC-EEEEECH-HHH-HHHHHHCHHHHS-------------------S
T ss_pred             eec-CCCCchHHhcC-CCCcEEEeeccchhh-ccC-cEEEeCH-HHH-HHHHHhchhhhc-------------------C
Confidence            321 01111  1112 247899999999998 545 8888753 322 22211 111111                   0


Q ss_pred             CCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHH
Q 010842          366 RRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKL  442 (499)
Q Consensus       366 r~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l  442 (499)
                      .....+...   .+++.+...++++..++..++++++.+.|++. ++++. ++..+++++.+..         .....++
T Consensus       266 ~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~---------~~~~~~l  334 (384)
T 1bs0_A          266 TSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFTLA-DSCSAIQPLIVGD---------NSRALQL  334 (384)
T ss_dssp             BCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEEC-SCCSSBCCEEEES---------HHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCccc-CCCCCEEEEEeCC---------HHHHHHH
Confidence            011223333   34443321156788888999999999999988 68776 3455566666642         1235678


Q ss_pred             HHHHHhcCCEEEEeeeE---CCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          443 LDWVNSTGRVYLTHTIV---GGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       443 ~~~l~~~g~~~~~~~~~---~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      .++|.++|+.+.....+   .+..++|+++. ..+|++++++++++|+++
T Consensus       335 ~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~-~~~~~~~i~~~~~~l~~~  383 (384)
T 1bs0_A          335 AEKLRQQGCWVTAIRPPTVPAGTARLRLTLT-AAHEMQDIDRLLEVLHGN  383 (384)
T ss_dssp             HHHHHHTTEECCEECTTSSCTTCEEECCBCC-TTCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHCCcEEEeecCCCCCCCCceEEEEEc-CCCCHHHHHHHHHHHHhh
Confidence            88888887543322211   24578999995 778999999999999875

>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*

Probab=99.90  E-value=1.5e-22  Score=205.10  Aligned_cols=325  Identities=13%  Similarity=0.059  Sum_probs=214.7

Q ss_pred             HHHHHHHHHHHcccC---CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh
Q 010842          103 AGFLGEMLCACFNSV---GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD  179 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~  179 (499)
                      +..+.+.+...+...   ...|...++..+++++    +++++|.+.+       ..++|+|+|+|+..++.+..+    
T Consensus        49 ~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~----la~~~g~~~~-------~v~~~~g~~~al~~~~~~~~~----  113 (397)
T 2zyj_A           49 KEEAAEAAARILREKGEVALQYSPTEGYAPLRAF----VAEWIGVRPE-------EVLITTGSQQALDLVGKVFLD----  113 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHH----HHHHHTSCGG-------GEEEESHHHHHHHHHHHHHCC----
T ss_pred             HHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHH----HHHHhCCChh-------hEEEeccHHHHHHHHHHHhCC----
Confidence            344555555444321   1344444566777777    5555576543       468999999998888776532    


Q ss_pred             HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEE-EEecCCCc
Q 010842          180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFL-CATVGTTS  258 (499)
Q Consensus       180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~v-v~t~gtt~  258 (499)
                             ++..|+++..+|.++...++..|.   +++.+|.+++   .+|+++|++++++.     .+.+| +...++|+
T Consensus       114 -------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~---~~d~~~l~~~l~~~-----~~~~v~~~~~~~np  175 (397)
T 2zyj_A          114 -------EGSPVLLEAPSYMGAIQAFRLQGP---RFLTVPAGEE---GPDLDALEEVLKRE-----RPRFLYLIPSFQNP  175 (397)
T ss_dssp             -------TTCEEEEEESCCHHHHHHHHTTCC---EEEEEEEETT---EECHHHHHHHHHHC-----CCSCEEECCBSCTT
T ss_pred             -------CCCEEEEeCCCcHHHHHHHHHcCC---EEEecCcCCC---CCCHHHHHHHHhhc-----CCeEEEECCCCcCC
Confidence                   456788888999999999999999   9999998753   39999999999751     12244 56788999


Q ss_pred             ccccCCh---hHHHHHHHHhCCEEEeeccccchhccCcc---chhhhcCCC---CCceeEecccccccCCCcceEEEEeC
Q 010842          259 TTAVDNV---EPLAEVANEYGIWVHVDAAYAGSACICPE---FRHYLNGIE---RVDSFSFSPHKWLLSYLDCCCLWVKQ  329 (499)
Q Consensus       259 ~G~id~l---~~I~~ia~~~~~~lhvD~A~g~~~~~~~~---~~~~~~g~~---~aDsi~~~~hK~l~~p~~~g~l~~r~  329 (499)
                      +|.+-|.   ++|+++|++||+++++|++|+.+......   ....  +..   ....++.+.||+++....+|++++++
T Consensus       176 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~--~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~  253 (397)
T 2zyj_A          176 TGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFEL--AREAGYPGVIYLGSFSKVLSPGLRVAFAVAHP  253 (397)
T ss_dssp             TCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHH--HHHHTCCCEEEEEESTTTTCGGGCCEEEECCH
T ss_pred             CCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhh--CcccCCCeEEEEecccccccccceeEEEecCH
Confidence            9999765   48999999999999999999876432111   1111  101   12367889999999335689998864


Q ss_pred             chhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH---HHHHHHHHHHHHHHHHHHHHHhc-
Q 010842          330 PGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV---LNLQSHIRSDIRLAKMFEGFVKS-  405 (499)
Q Consensus       330 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~---~g~~~~~~~~~~~a~~l~~~L~~-  405 (499)
                      +  +.+.+.......                +. ++   ..+...++...+..   +.+++..++..++++++.+.|++ 
T Consensus       254 ~--~~~~l~~~~~~~----------------~~-~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~  311 (397)
T 2zyj_A          254 E--ALQKLVQAKQGA----------------DL-HT---PMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHALDRE  311 (397)
T ss_dssp             H--HHHHHHHHHHHH----------------HS-SC---CHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             H--HHHHHHHHHHhh----------------cC-CC---CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            2  222221110000                00 00   23334444444321   45677778888889999999987 


Q ss_pred             CC-CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC----CEEEEEEeccCCCCcHHHHH
Q 010842          406 DP-RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG----GLYMLRFAVGASLTDERHVV  480 (499)
Q Consensus       406 ~~-~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----g~~~lRi~~~~~~~t~~di~  480 (499)
                      .| ++++..+.....+++++....         ...++.++|.++|+.+..+..+.    +..++|+++..  .++++|+
T Consensus       312 ~~~g~~~~~~~~g~~~~~~~~~~~---------~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~~~--~~~~~i~  380 (397)
T 2zyj_A          312 VPKEVRYTRPKGGMFVWMELPKGL---------SAEGLFRRALEENVAFVPGGPFFANGGGENTLRLSYAT--LDREGIA  380 (397)
T ss_dssp             SCTTSEECCCSBSSEEEEECSTTC---------CHHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEECSS--SCHHHHH
T ss_pred             CCCCeEEccCCccEEEEEEcCCCC---------CHHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEcCC--CCHHHHH
Confidence            57 688765555556667664311         14567888888886554433332    34689999963  3899999


Q ss_pred             HHHHHHHHHHHHHhc
Q 010842          481 AAWELIMEGADRLFK  495 (499)
Q Consensus       481 ~l~~~l~~~~~~l~~  495 (499)
                      +++++|.++.+++.+
T Consensus       381 ~~~~~l~~~l~~~~~  395 (397)
T 2zyj_A          381 EGVRRLGRALKGLLA  395 (397)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999887653

>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*

Probab=99.90  E-value=2.9e-22  Score=215.64  Aligned_cols=323  Identities=12%  Similarity=0.019  Sum_probs=207.3

Q ss_pred             HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH-HHHhCCC
Q 010842          133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV-CKLAGVS  211 (499)
Q Consensus       133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka-~~~~G~g  211 (499)
                      ++.+.+++++|.+..        .++++|+|+||..++.+...           ++..|+++...|.|+..+ +++.|+ 
T Consensus       177 e~e~~lA~~~gae~~--------i~v~nGtt~an~~ai~al~~-----------pGD~VLv~~~~H~S~~~~~~~l~Ga-  236 (730)
T 1c4k_A          177 AAEKHAARVYNADKT--------YFVLGGSSNANNTVTSALVS-----------NGDLVLFDRNNHKSVYNSALAMAGG-  236 (730)
T ss_dssp             HHHHHHHHHTTCSEE--------EEESSHHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHTTTTCC-
T ss_pred             HHHHHHHHHHCCCcE--------EEECCHHHHHHHHHHHHhcC-----------CCCEEEEcCCchHHHHHHHHHHCCC-
Confidence            344559999998765        26777777999888877532           567899999999999998 888888 


Q ss_pred             CCCeEEeeCCCCC---CCccCHHHH-----HHHHHHH-HH--cCCcc-EEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842          212 PANIRALPTSVDA---NFSLSPQLL-----RRAVEAD-VE--AGLVP-LFLCATVGTTSTTAVDNVEPLAEVANEYGIWV  279 (499)
Q Consensus       212 ~~~v~~v~~~~~~---~~~~d~~~L-----~~~i~~~-~~--~g~~p-~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l  279 (499)
                        .++.++.+.+.   .+.+|+++|     +++|+++ .+  ....| .+|+++.+ |++|.+.|+++|+++|+++|+++
T Consensus       237 --~~v~v~~~~~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~l  313 (730)
T 1c4k_A          237 --RPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYI  313 (730)
T ss_dssp             --EEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEE
T ss_pred             --EEEEEeCCccccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeE
Confidence              88888765321   124788888     7777543 11  01123 46777777 57999999999999999999999


Q ss_pred             EeeccccchhccCccchh--hh-cCCCCCc----eeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCC
Q 010842          280 HVDAAYAGSACICPEFRH--YL-NGIERVD----SFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESN  352 (499)
Q Consensus       280 hvD~A~g~~~~~~~~~~~--~~-~g~~~aD----si~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~  352 (499)
                      |||+||+++..+.+..+.  .+ ....++|    +++.++||++++|.++|+++++++..     .....++...     
T Consensus       314 ivDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~gg~I~v~~~~l-----~g~~~~i~~~-----  383 (730)
T 1c4k_A          314 EFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHI-----KGQLRYCDHK-----  383 (730)
T ss_dssp             EEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGG-----TTSTTCCCHH-----
T ss_pred             EEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCCCEEEEEecchhh-----cCcccccCHH-----
Confidence            999999865444443321  11 1011367    99999999999998899999988642     0111111100     


Q ss_pred             CcccCCCcccCCCCCCC--cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEcCCC-------------
Q 010842          353 SVVDFKDWQVGTGRRFK--SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEIVVPRH-------------  416 (499)
Q Consensus       353 ~~~~~~~~~~~~sr~~~--al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~~-------------  416 (499)
                       ..+..-...+.+.+.-  ...+-.+++.+..++..+++++..++++++++.|++ +++++++.+..             
T Consensus       384 -~~~~~~~~~~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~~p~~~~~~~~~~~~~~~  462 (730)
T 1c4k_A          384 -HFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDGDTED  462 (730)
T ss_dssp             -HHHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGSCHHH
T ss_pred             -HHHHHHHHhCCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEcccccccccccccccccc
Confidence             0000000111122211  123334555554434467789999999999999998 78999865421             


Q ss_pred             -----------------------c---eE----EEEEecCC--CCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEE
Q 010842          417 -----------------------F---AL----VCFRLNPY--PHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYM  464 (499)
Q Consensus       417 -----------------------~---~~----v~f~~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~  464 (499)
                                             .   .+    +.|...+.  ..+.-.........+.+.|.++|+.. ..  . +...
T Consensus       463 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L~e~GI~v-~~--~-~~~~  538 (730)
T 1c4k_A          463 MANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGIIP-EK--S-DLNS  538 (730)
T ss_dssp             HTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCCC-SE--E-CSSE
T ss_pred             ccccchhhccCccchhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHHHHCCcEE-EE--C-CCCe
Confidence                                   0   01    45554210  00000000011455677777778532 22  1 3456


Q ss_pred             EEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          465 LRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       465 lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      +|+++ ++.+|++++++++++|.++.+.+.
T Consensus       539 ir~~~-s~g~t~e~i~~Ll~aL~~i~~~~~  567 (730)
T 1c4k_A          539 ILFLM-TPAETPAKMNNLITQLLQLQRLIE  567 (730)
T ss_dssp             EEEEC-CTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEe-CCCCCHHHHHHHHHHHHHHHHhcc
Confidence            89988 588999999999999999987663

>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}

Probab=99.90  E-value=1e-21  Score=200.18  Aligned_cols=300  Identities=13%  Similarity=0.116  Sum_probs=196.8

Q ss_pred             HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH---
Q 010842          130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK---  206 (499)
Q Consensus       130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~---  206 (499)
                      ...++.+++++++|.+.         .++|+|||+|+..++.+...           ++..|+++...|.++...+.   
T Consensus        57 ~~~~l~~~la~~~g~~~---------~~~~~~gt~a~~~al~~l~~-----------~gd~vi~~~~~~~~~~~~~~~~~  116 (412)
T 2cb1_A           57 TAKALEERLKALEGALE---------AVVLASGQAATFAALLALLR-----------PGDEVVAAKGLFGQTIGLFGQVL  116 (412)
T ss_dssp             HHHHHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHTTCC-----------TTCEEEEETTCCHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchhHHHHHHHHH
Confidence            34445556889998753         48999999999998886521           45678889999988776643   


Q ss_pred             -HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842          207 -LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY  285 (499)
Q Consensus       207 -~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~  285 (499)
                       ..|+   +++.+|.        |+++|+++|+++      +.+|+++.++|++|.+.|+++|+++|++||+++|+|++|
T Consensus       117 ~~~g~---~~~~~~~--------~~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~  179 (412)
T 2cb1_A          117 SLMGV---TVRYVDP--------EPEAVREALSAK------TRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTF  179 (412)
T ss_dssp             TTTTC---EEEEECS--------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGG
T ss_pred             HHcCC---EEEEECC--------CHHHHHHHhccC------CeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCC
Confidence             4677   7888875        378898888653      347888999999999999999999999999999999999


Q ss_pred             cchhccCccchhhhcCCCCCceeEecccccccCCCc-ceEEEEeCch-hHHHhhcCCccCCCCCCC-----CCCCcccCC
Q 010842          286 AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-CCCLWVKQPG-LLVKALSTDPEYLKNKPS-----ESNSVVDFK  358 (499)
Q Consensus       286 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~r~~~-~l~~~~~~~~~yl~~~~~-----~~~~~~~~~  358 (499)
                      +.+.....   ...   ..+|++++++||+++.|.+ .|.++++++. .+.+.....++.......     .........
T Consensus       180 ~~~~~~~~---~~~---~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r  253 (412)
T 2cb1_A          180 GAAGALCR---PLA---WGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVR  253 (412)
T ss_dssp             GTTTTSCC---GGG---GTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHH
T ss_pred             ccccccCC---ccc---cCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhhccchHHHHHHHH
Confidence            87622111   111   1489999999999998876 6777766532 110000001111000000     000000000


Q ss_pred             Ccc-cCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----------------CceEE
Q 010842          359 DWQ-VGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----------------HFALV  420 (499)
Q Consensus       359 ~~~-~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~~~v  420 (499)
                      .++ ...+....+...|+.+..+  +.+.+++++..++++++.+.|.+.|+++.+..|                 ..+++
T Consensus       254 ~~~~~~~g~~~~~~~a~~~~~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~~~~~~~~~iv  331 (412)
T 2cb1_A          254 TLGLSLCGMALSPFNAYLLFQGL--ETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNARKYLASGGPIL  331 (412)
T ss_dssp             HHHTTTTCCCCCHHHHHHHHHHG--GGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHHHHCSSSCSEE
T ss_pred             HHHHHhcCCCCChHHhHHHHcCC--chHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHHhCCCCceEE
Confidence            011 0112233456666666544  666778888889999999999999998855222                 34688


Q ss_pred             EEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee---------eE---------------CC--EEEEEEeccCCCC
Q 010842          421 CFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT---------IV---------------GG--LYMLRFAVGASLT  474 (499)
Q Consensus       421 ~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~---------~~---------------~g--~~~lRi~~~~~~~  474 (499)
                      +|.+ + .          .+.+.+.+.+.|... .+.         ..               .|  ...+|+|++ ..+
T Consensus       332 ~~~~-~-~----------~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g-~~~  397 (412)
T 2cb1_A          332 TLDL-G-D----------LERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVG-LED  397 (412)
T ss_dssp             EEEC-S-S----------HHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECC-SSC
T ss_pred             EEEe-C-C----------HHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEec-cCC
Confidence            8988 4 2          233444455557654 321         00               01  468999995 889


Q ss_pred             cHHHHHHHHHHHHH
Q 010842          475 DERHVVAAWELIME  488 (499)
Q Consensus       475 t~~di~~l~~~l~~  488 (499)
                      ++++|+.+.++|++
T Consensus       398 ~~~~i~~l~~al~~  411 (412)
T 2cb1_A          398 PLDLLALFEEALEA  411 (412)
T ss_dssp             HHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHhh
Confidence            99999999999864

>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*

Probab=99.90  E-value=1.8e-22  Score=206.14  Aligned_cols=339  Identities=13%  Similarity=0.061  Sum_probs=222.8

Q ss_pred             HHHHHHHHHHcccCC--cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          104 GFLGEMLCACFNSVG--FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~--~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      ..+.+.+...+....  ..|....+..++++++.+|+.+.+|.+...    ....++|+|||+|+..++.+...      
T Consensus        44 ~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~----~~~i~~~~g~~~a~~~~~~~~~~------  113 (422)
T 3fvs_A           44 DFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDP----LRNVLVTVGGYGALFTAFQALVD------  113 (422)
T ss_dssp             HHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCH----HHHEEEESHHHHHHHHHHHHHCC------
T ss_pred             HHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC----CCcEEEECChHHHHHHHHHHHcC------
Confidence            344555555554322  355555567899999999999999875320    01369999999999888876632      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC----CC------CCccCHHHHHHHHHHHHHcCCccEEEE
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV----DA------NFSLSPQLLRRAVEADVEAGLVPLFLC  251 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~----~~------~~~~d~~~L~~~i~~~~~~g~~p~~vv  251 (499)
                           ++..|+++..+|.++...++..|.   +++.+|++.    +|      +|.+|+++|+++++++      +.+|+
T Consensus       114 -----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~------~~~v~  179 (422)
T 3fvs_A          114 -----EGDEVIIIEPFFDCYEPMTMMAGG---RPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR------TKALV  179 (422)
T ss_dssp             -----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTT------EEEEE
T ss_pred             -----CCCEEEEcCCCchhhHHHHHHcCC---EEEEEecccccccccccccccCCCCCHHHHHhhcCCC------ceEEE
Confidence                 456788889999999999999999   999999886    22      5789999999988643      44788


Q ss_pred             EecCCCcccccC---ChhHHHHHHHHhCCEEEeeccccchhccCccchhhh--cCCCCCceeEecccccccCC-CcceEE
Q 010842          252 ATVGTTSTTAVD---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL--NGIERVDSFSFSPHKWLLSY-LDCCCL  325 (499)
Q Consensus       252 ~t~gtt~~G~id---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~l~~p-~~~g~l  325 (499)
                      ++.++|++|.+-   ++++|+++|++||+++++|++|+.+...........  ......+.+..+.+|+++.| ..+|++
T Consensus       180 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~  259 (422)
T 3fvs_A          180 LNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWV  259 (422)
T ss_dssp             EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEE
T ss_pred             ECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCCccceEEEE
Confidence            889999999997   599999999999999999999987543221111111  11112446778899999744 668888


Q ss_pred             EEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---------cHHHHHHHHHHHHHHH
Q 010842          326 WVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---------GVLNLQSHIRSDIRLA  396 (499)
Q Consensus       326 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---------g~~g~~~~~~~~~~~a  396 (499)
                      +.+++ .+ +.+.......                    +.....+..+++...+         ..+.++++.++..+++
T Consensus       260 ~~~~~-~~-~~~~~~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  317 (422)
T 3fvs_A          260 LGPDH-IM-KHLRTVHQNS--------------------VFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCR  317 (422)
T ss_dssp             ECCHH-HH-HHHHHHHHTT--------------------TCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHH
T ss_pred             EeCHH-HH-HHHHHHHhhc--------------------cCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHH
Confidence            77653 22 2221100000                    0001223333333333         2456788888999999


Q ss_pred             HHHHHHHhcCCCeEEEcCCCceEEEEEecCCCC-CC---cchhHHHHHHHHHHHH-hcCCEEEEeeeE-------CCEEE
Q 010842          397 KMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPH-SG---SADTEMLNRKLLDWVN-STGRVYLTHTIV-------GGLYM  464 (499)
Q Consensus       397 ~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~-~~---~~~~~~~~~~l~~~l~-~~g~~~~~~~~~-------~g~~~  464 (499)
                      +++.+.|++. ++++..+.....+++.+..... ..   .........++.+.+. +.|+.+..+..+       .+..+
T Consensus       318 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~  396 (422)
T 3fvs_A          318 DHMIRSLQSV-GLKPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDHY  396 (422)
T ss_dssp             HHHHHHHHTT-TCEEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCSE
T ss_pred             HHHHHHHHHc-CCeecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHhcCCcCCCCCCCe
Confidence            9999999988 8887765555555555532100 00   0000000235555544 457554444433       24678


Q ss_pred             EEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          465 LRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       465 lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      +|++++   .++++|++++++|+++.++
T Consensus       397 iRis~~---~~~e~i~~~l~~l~~~l~~  421 (422)
T 3fvs_A          397 IRFCFV---KDEATLQAMDEKLRKWKVE  421 (422)
T ss_dssp             EEEECC---CCHHHHHHHHHHHHHHHHC
T ss_pred             EEEEec---CCHHHHHHHHHHHHHHHhh
Confidence            999986   3999999999999987654

>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*

Probab=99.90  E-value=4.7e-22  Score=201.36  Aligned_cols=316  Identities=13%  Similarity=0.081  Sum_probs=203.5

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK  203 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k  203 (499)
                      +|...+++++    +++++|.+         ..++++|||+|+..++.+.+-.          ++..|+++..+|.++..
T Consensus        31 g~~~~~l~~~----la~~~~~~---------~v~~~~ggt~al~~~~~~l~~~----------~gd~Vl~~~~~~~~~~~   87 (394)
T 1o69_A           31 GEFVNRFEQS----VKDYSKSE---------NALALNSATAALHLALRVAGVK----------QDDIVLASSFTFIASVA   87 (394)
T ss_dssp             THHHHHHHHH----HHHHHCCS---------EEEEESCHHHHHHHHHHHTTCC----------TTCEEEEESSSCGGGTH
T ss_pred             ChHHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHcCCC----------CCCEEEECCCccHHHHH
Confidence            4556666666    77777763         2599999999999888876211          45678999999999999


Q ss_pred             HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeec
Q 010842          204 VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDA  283 (499)
Q Consensus       204 a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~  283 (499)
                      +++..|+   +++.+|+++  +|.+|+++|+++|++..   ..+.+|+++.   ++|...|+++|.++|+++|+++|+|+
T Consensus        88 ~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~---~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~De  156 (394)
T 1o69_A           88 PICYLKA---KPVFIDCDE--TYNIDVDLLKLAIKECE---KKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDA  156 (394)
T ss_dssp             HHHHTTC---EEEEECBCT--TSSBCHHHHHHHHHHCS---SCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEEC
T ss_pred             HHHHcCC---EEEEEEeCC--CCCcCHHHHHHHHhccc---CCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEEC
Confidence            9999999   999999884  46999999999997521   1133555554   78999999999999999999999999


Q ss_pred             cccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842          284 AYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVG  363 (499)
Q Consensus       284 A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~  363 (499)
                      +|+.+......  . ...+..+|.++++.||.++ |.++|+++++++............+....       ..+ . ..+
T Consensus       157 a~~~g~~~~~~--~-~~~~~~~~~~s~s~~K~l~-~~~~G~~~~~~~~l~~~l~~~~~~~~~~~-------~~~-~-~~~  223 (394)
T 1o69_A          157 AEALGSFYKNK--A-LGTFGEFGVYSYNGNKIIT-TSGGGMLIGKNKEKIEKARFYSTQARENC-------LHY-E-HLD  223 (394)
T ss_dssp             TTCTTCEETTE--E-TTSSSSEEEEECCTTSSSC-CSSCEEEEESCHHHHHHHHHHTBTCCCSS-------SSC-C-CSS
T ss_pred             cCcccceeCCc--c-cccccCcEEEEEeCCccCC-CCCceEEEECCHHHHHHHHHHHHhccccC-------ccc-c-ccc
Confidence            99833322211  1 1112348899999999876 66899999876553322211111111000       000 0 112


Q ss_pred             CCCCCCc--HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----CceEEEEEecCCC--------
Q 010842          364 TGRRFKS--LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----HFALVCFRLNPYP--------  428 (499)
Q Consensus       364 ~sr~~~a--l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----~~~~v~f~~~~~~--------  428 (499)
                      .+.+++.  +...+++..  .+.+++.+++..++++++.+.|++.  ++++.++     .+.++++.+.+..        
T Consensus       224 ~g~~~~~~~~~aa~~l~~--l~~l~~~~~~~~~~~~~l~~~L~~~--~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  299 (394)
T 1o69_A          224 YGYNYRLSNVLGAIGVAQ--MEVLEQRVLKKREIYEWYKEFLGEY--FSFLDELENSRSNRWLSTALINFDKNELNACQK  299 (394)
T ss_dssp             CCCBCBCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHTTT--EECCCCCTTEECCCSSEEEEESCCGGGSCCCCE
T ss_pred             cCcccCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccc--ccccCCCCCCcceeEEEEEEecchhhccccccc
Confidence            2333333  333333333  3567888899999999999999887  6665432     2235677765310        


Q ss_pred             ----CCCcchhHHHHHHHHHHHHhcCCEEEEee-------eECC-------------EEEEEEeccCCCCcHHHHHHHHH
Q 010842          429 ----HSGSADTEMLNRKLLDWVNSTGRVYLTHT-------IVGG-------------LYMLRFAVGASLTDERHVVAAWE  484 (499)
Q Consensus       429 ----~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-------~~~g-------------~~~lRi~~~~~~~t~~di~~l~~  484 (499)
                          ............++.+.|.++|+.+-.+.       .+..             ...+|+.. ++.+|++||+++++
T Consensus       300 ~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~t~edi~~~~~  378 (394)
T 1o69_A          300 DINISQKNITLHPKISKLIEDLKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPS-GTAMSKDDVYEISK  378 (394)
T ss_dssp             EEECCCCCCCCCHHHHHHHHHHHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECC-CTTCCHHHHHHHHH
T ss_pred             cccccccccccccCHHHHHHHHHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccC-CCCCCHHHHHHHHH
Confidence                00000001124567888888886432220       1111             02355555 68999999999999


Q ss_pred             HHHHHHH
Q 010842          485 LIMEGAD  491 (499)
Q Consensus       485 ~l~~~~~  491 (499)
                      +|+++.+
T Consensus       379 ~l~~~~~  385 (394)
T 1o69_A          379 LILKSIK  385 (394)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHHh
Confidence            9988754

>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}

Probab=99.90  E-value=6.9e-22  Score=198.71  Aligned_cols=323  Identities=13%  Similarity=0.059  Sum_probs=216.3

Q ss_pred             HHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          104 GFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       104 ~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      ..+.+.+...+... ...|...++..++++++.+|+.+.+|.+.+.    ....++|+|||+|+..++.+..+       
T Consensus        41 ~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~----~~~v~~~~g~~~a~~~~~~~l~~-------  109 (376)
T 2dou_A           41 EAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDP----RREALALIGSQEGLAHLLLALTE-------  109 (376)
T ss_dssp             HHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCT----TTSEEEESSHHHHHHHHHHHHCC-------
T ss_pred             HHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CccEEEcCCcHHHHHHHHHHhcC-------
Confidence            34555666655432 2344443567889999999998888986210    01369999999999888876532       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|+++..+|.++..+++..|.   +++.+|+ ++ ++.+|+++|+++++++      +.+|+++.++|++|.+
T Consensus       110 ----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~-~~-~~~~d~~~l~~~l~~~------~~~v~l~~p~nptG~~  174 (376)
T 2dou_A          110 ----PEDLLLLPEVAYPSYFGAARVASL---RTFLIPL-RE-DGLADLKAVPEGVWRE------AKVLLLNYPNNPTGAV  174 (376)
T ss_dssp             ----TTCEEEEESSCCHHHHHHHHHTTC---EEEEECB-CT-TSSBCGGGSCHHHHHH------EEEEEECSSCTTTCCC
T ss_pred             ----CCCEEEECCCCcHhHHHHHHHcCC---EEEEeeC-CC-CCCCCHHHHHHhhccC------ceEEEECCCCCCcCcc
Confidence                456788899999999999999999   9999998 33 4789999999999654      3477778899999999


Q ss_pred             CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhc--CCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842          263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN--GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA  336 (499)
Q Consensus       263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~--g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~  336 (499)
                      -|   +++|+++|++||+++++|++|+.+.... .......  +....+.++.+.+|+++.| ..+|+++.++ +.. +.
T Consensus       175 ~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-~~~-~~  251 (376)
T 2dou_A          175 ADWGYFEEALGLARKHGLWLIHDNPYVDQVYEG-EAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE-EAL-AR  251 (376)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSS-CCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECH-HHH-HH
T ss_pred             CCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCH-HHH-HH
Confidence            66   7889999999999999999998764321 1111111  1123567788999999744 4578887643 322 22


Q ss_pred             hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842          337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP  414 (499)
Q Consensus       337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~  414 (499)
                      +........                  .  ....+...++...+  +.+.+++..++..++++++.+.|++.  +++..+
T Consensus       252 l~~~~~~~~------------------~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~~~~~~  309 (376)
T 2dou_A          252 LERVKGVID------------------F--NQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV--LSLLPP  309 (376)
T ss_dssp             HHHHHHHHC------------------C--CSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--SEECCC
T ss_pred             HHHHHHhcc------------------c--CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--cCccCC
Confidence            211100000                  0  00123333343333  35667888888889999999999887  776533


Q ss_pred             CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      .....+++++....         ...++.++|.++|+.+..+..+.  +..++|++++   .++++|+++++.|.++
T Consensus       310 ~~~~~~~~~~~~~~---------~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~~---~~~~~i~~~l~~l~~~  374 (376)
T 2dou_A          310 RATMYLWGRLPEGV---------DDLEFGLRLVERGVALAPGRGFGPGGKGFVRIALV---RPLEELLEAAKRIREA  374 (376)
T ss_dssp             CBSSEEEEECCTTC---------CHHHHHHHHHHTTEECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHHHT
T ss_pred             CeeEEEEEECCCCC---------CHHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEec---CCHHHHHHHHHHHHHH
Confidence            33334556664311         13567788888885544433332  2468999986   2789999999998875

>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*

Probab=99.90  E-value=2.2e-23  Score=209.09  Aligned_cols=336  Identities=11%  Similarity=0.004  Sum_probs=204.9

Q ss_pred             cCCCCCChHHHHHHHHHHHc----ccCCcc---cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEE-cCChHHHH
Q 010842           95 FFPATVSTAGFLGEMLCACF----NSVGFN---WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVI-QNTTSDSI  166 (499)
Q Consensus        95 ~~~~~~~~~~~~~~~l~~~~----n~~~~~---~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~-t~ggt~A~  166 (499)
                      +.|++...|..+.+.+...+    ++....   ...++.+.++-+++++.+++++|.++..      ..+| |+|||+|+
T Consensus        31 ~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~------evif~t~~~T~a~  104 (386)
T 3qm2_A           31 FSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNY------KVLFCHGGGRGQF  104 (386)
T ss_dssp             CCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTE------EEEEEESCTTHHH
T ss_pred             ccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHHH
Confidence            44555555555555554333    111111   1124555666677888999999997531      3477 69999998


Q ss_pred             HHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh-CCCCCCeEEeeCC--CCCCCccCHHHHHHHHHHHHHc
Q 010842          167 LVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA-GVSPANIRALPTS--VDANFSLSPQLLRRAVEADVEA  243 (499)
Q Consensus       167 ~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~-G~g~~~v~~v~~~--~~~~~~~d~~~L~~~i~~~~~~  243 (499)
                      .+++.....           ++..+++....|++. ++...+ ..|  ++..+|++  ++| ..+++++++.+|+++++ 
T Consensus       105 n~ai~~l~~-----------~gd~v~~~~~~~~~~-~~~~~a~~~G--~v~~v~~~~~~~G-~~~~~~~~~~~l~~~t~-  168 (386)
T 3qm2_A          105 AGVPLNLLG-----------DKTTADYVDAGYWAA-SAIKEAKKYC--APQIIDAKITVDG-KRAVKPMREWQLSDNAA-  168 (386)
T ss_dssp             HHHHHHHCT-----------TCCEEEEEESSHHHH-HHHHHHTTTS--EEEEEECEEEETT-EEEECCGGGCCCCTTCS-
T ss_pred             HHHHHhccC-----------CCCeEEEEeCCHHHH-HHHHHHHHhC--CeEEEecCcccCC-CCCCchHHHhhcCCCCc-
Confidence            887765421           223333333345553 222222 234  58889987  444 23788888877766544 


Q ss_pred             CCccEEEEEecCCCccccc-CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842          244 GLVPLFLCATVGTTSTTAV-DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC  322 (499)
Q Consensus       244 g~~p~~vv~t~gtt~~G~i-d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~  322 (499)
                           +|++++.+|.+|.+ +|+++|+     +|+++|||++++.+....+-        ...|.+++++|||++ |.|+
T Consensus       169 -----lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv--------~~~~~~~~s~hK~lG-P~G~  229 (386)
T 3qm2_A          169 -----YLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDV--------SRYGVIYAGAQKNIG-PAGL  229 (386)
T ss_dssp             -----CEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCG--------GGCSEEEEETTTTTC-CTTE
T ss_pred             -----EEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCc--------cccCEEEEecccccC-CCcc
Confidence                 68899999999995 9999996     89999999999877654432        124568899999996 9999


Q ss_pred             eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHH
Q 010842          323 CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFE  400 (499)
Q Consensus       323 g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~  400 (499)
                      |++++|++.. .+.....+.++....     ..... .. .++... ....+-.+++.+... |++++.++..+++++++
T Consensus       230 g~l~v~~~~~-~~~~~~~p~~~~~~~-----~~~~~-~~-~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~  301 (386)
T 3qm2_A          230 TLVIVREDLL-GKAHESCPSILDYTV-----LNDND-SM-FNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLY  301 (386)
T ss_dssp             EEEEEEGGGC-SCCCTTSCGGGCHHH-----HHHC---------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             EEEEECHHHH-hhhcccCCcHHHHHH-----HhhcC-CC-CCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence            9999997531 110011121211000     00000 00 011111 234566777777677 89999999999999999


Q ss_pred             HHHhcCCCe-EEEcCC--C-ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcH
Q 010842          401 GFVKSDPRF-EIVVPR--H-FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDE  476 (499)
Q Consensus       401 ~~L~~~~~~-~~~~~~--~-~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~  476 (499)
                      +.|+++ ++ ....++  . ..+++|.+.+..      .   ...+...|.+.|++...+  ......+|+|+. ..+|+
T Consensus       302 ~~l~~~-~~~~~~~~~~~rs~~iv~f~~~~~~------~---~~~~~~~L~~~gI~~~~g--~~~~~~iRiS~~-~~~t~  368 (386)
T 3qm2_A          302 GVIDNS-DFYRNDVAQANRSRMNVPFQLADNT------L---DKVFLEESFAAGLHALKG--HRVVGGMRASIY-NAMPI  368 (386)
T ss_dssp             HHHHTC-SSEECCBCGGGBCSSEEEEEESSGG------G---HHHHHHHHHHTTEECCBC--CTTTCSEEEECC-TTSCH
T ss_pred             HHHHHC-CCcccCCCHHHcCceEEEEECCCcc------c---cHHHHHHHHHCCCEEeCC--CCCcCeEEEEcC-CCCCH
Confidence            999988 55 332222  2 358899886421      1   245666677788543222  111234999995 78999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010842          477 RHVVAAWELIMEGADR  492 (499)
Q Consensus       477 ~di~~l~~~l~~~~~~  492 (499)
                      +|||+++++|+++.++
T Consensus       369 edId~l~~~l~~~~~~  384 (386)
T 3qm2_A          369 EGVKALTDFMIDFERR  384 (386)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999998765

>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*

Probab=99.89  E-value=2e-21  Score=196.41  Aligned_cols=337  Identities=11%  Similarity=0.090  Sum_probs=208.2

Q ss_pred             CChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh
Q 010842          100 VSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD  179 (499)
Q Consensus       100 ~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~  179 (499)
                      +..+..+.+.+...+...  .|..++...++|++    +++++|.+.         .+++++||+|+..++.+++...  
T Consensus        11 ~~~~~~~~~a~~~~~~~~--~~~~~~~~~~l~~~----la~~~~~~~---------~i~~~sGt~a~~~al~~~~~~~--   73 (390)
T 3b8x_A           11 STWDDLEYKAIQSVLDSK--MFTMGEYVKQYETQ----FAKTFGSKY---------AVMVSSGSTANLLMIAALFFTK--   73 (390)
T ss_dssp             CCCCHHHHHHHHHHHHHT--CCSSCHHHHHHHHH----HHHHHTCSE---------EEEESCHHHHHHHHHHHTTSSS--
T ss_pred             CCCCHHHHHHHHHHHHcC--CCCCChHHHHHHHH----HHHHHCCCc---------EEEECCHHHHHHHHHHHHHhhh--
Confidence            333333444455444322  24456666777766    777788763         3899999999998888763100  


Q ss_pred             Hhhhhcc-CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc
Q 010842          180 AVGAENM-HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS  258 (499)
Q Consensus       180 ~~~~~g~-~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~  258 (499)
                         ..+. ++..|+++..+|.++..+++..|+   +++.+|++++ ++.+|+++|+++|+++      +.+|+++   ++
T Consensus        74 ---~~~~~~g~~Vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~---~~  137 (390)
T 3b8x_A           74 ---KPRLKKGDEIIVPAVSWSTTYYPLQQYGL---RVKFVDIDIN-TLNIDIESLKEAVTDS------TKAILTV---NL  137 (390)
T ss_dssp             ---SCSCCTTCEEEEESSSCHHHHHHHHHTTC---EEEEECBCTT-TCSBCHHHHHHHCCTT------EEEEEEE---CG
T ss_pred             ---hcCCCCcCEEEECCCCcHHHHHHHHHcCC---EEEEEecCcc-ccCcCHHHHHHHhCcC------CeEEEEE---CC
Confidence               0001 456789999999999999999999   9999999865 4799999999998653      2355554   36


Q ss_pred             ccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCC-CCCceeEecccccccCCCcceEEEEeCchhHHH--
Q 010842          259 TTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVK--  335 (499)
Q Consensus       259 ~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~--  335 (499)
                      +|...|+++|+++|+++|+++|+|++|+.+.....  ..  .+. ....++++.+.|.+.+|.| |+++++++....+  
T Consensus       138 ~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~--~~--~g~~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~~~~~  212 (390)
T 3b8x_A          138 LGNPNNFDEINKIIGGRDIILLEDNCESMGATFNN--KC--AGTFGLMGTFSSFYSNHIATMEG-GCIVTDDEEIYHILL  212 (390)
T ss_dssp             GGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEETT--EE--TTSSSSEEEEECCTTSSSCSSSC-EEEEESCHHHHHHHH
T ss_pred             ccChhhHHHHHHHHHHcCCEEEEECcCcccCEECC--cc--cccccceEEEEccCCCCCccCCc-eEEEeCCHHHHHHHH
Confidence            78999999999999999999999999985543311  11  121 1223444444455555544 8888776443211  


Q ss_pred             hhcCCccCCCCCC--------CCCCCcccCCCcccCCCCC--CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 010842          336 ALSTDPEYLKNKP--------SESNSVVDFKDWQVGTGRR--FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS  405 (499)
Q Consensus       336 ~~~~~~~yl~~~~--------~~~~~~~~~~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~  405 (499)
                      .+... .+..+..        ...........+. ..+.+  ...+..++++..+  +.+++..++..++++++.+.|++
T Consensus       213 ~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~aa~~l~~l--~~l~~~~~~~~~~~~~l~~~L~~  288 (390)
T 3b8x_A          213 CIRAH-GWTRNLPKKNKVTGVKSDDQFEESFKFV-LPGYNVRPLEMSGAIGIEQL--KKLPRFISVRRKNAEYFLDKFKD  288 (390)
T ss_dssp             HHTBT-TBSTTSCSEETTTEECCSCTTTSSSCBC-SCCCBCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHhc-CCCcccccccccccccccccccccccee-ccccccCcCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcC
Confidence            11111 1000000        0000000000011 12222  3456667666654  77889999999999999999999


Q ss_pred             CCCeEEEcCC-CceE--EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEE---ee-----e-EC--C----------
Q 010842          406 DPRFEIVVPR-HFAL--VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLT---HT-----I-VG--G----------  461 (499)
Q Consensus       406 ~~~~~~~~~~-~~~~--v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~-----~-~~--g----------  461 (499)
                      +|++++..++ ..+.  +.+.+.+..   ..    ...++.+.|.++|+.+-.   ++     . +.  +          
T Consensus       289 ~~~~~~~~~~~~~~~~~~~i~~~~~~---~~----~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (390)
T 3b8x_A          289 HPYLDVQQETGESSWFGFSFIIKKDS---GV----IRKQLVENLNSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNA  361 (390)
T ss_dssp             CSSEEECCCCSBCCCCEEEEEECTTS---CC----CHHHHHHHHHHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHH
T ss_pred             CCCcccCCCCCCcccEEEEEEecCcC---cc----cHHHHHHHHHHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHH
Confidence            9999876532 2232  444554210   00    135677777777854322   11     1 11  0          


Q ss_pred             ----EEEEEEeccCCCCcHHHHHHHHHHH
Q 010842          462 ----LYMLRFAVGASLTDERHVVAAWELI  486 (499)
Q Consensus       462 ----~~~lRi~~~~~~~t~~di~~l~~~l  486 (499)
                          ...+|+++ ++.+|++||++++++|
T Consensus       362 ~~~~~~~l~l~~-~~~~t~~di~~i~~~l  389 (390)
T 3b8x_A          362 EYLDKNGLFVGN-HQIELFDEIDYLREVL  389 (390)
T ss_dssp             HHHHHHEEEEEC-CSSCCHHHHHHHHHHT
T ss_pred             HHHhcCEEEeeC-CCCCCHHHHHHHHHhh
Confidence                13699998 5999999999999876

>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*

Probab=99.89  E-value=3.3e-23  Score=207.76  Aligned_cols=318  Identities=15%  Similarity=0.129  Sum_probs=209.4

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ..+.+.+...+...  .|..++...++|++    +++++|.+.         +++++|||+|+..++.+++-.       
T Consensus        16 ~~v~~a~~~~~~~~--~~~~~~~~~~l~~~----la~~~~~~~---------~~~~~sGt~al~~al~~~~~~-------   73 (367)
T 3nyt_A           16 DKIDAGIQRVLRHG--QYILGPEVTELEDR----LADFVGAKY---------CISCANGTDALQIVQMALGVG-------   73 (367)
T ss_dssp             HHHHHHHHHHHHHC--CCSSCHHHHHHHHH----HHHHHTCSE---------EEEESCHHHHHHHHHHHTTCC-------
T ss_pred             HHHHHHHHHHHhcC--CccCChHHHHHHHH----HHHHhCCCc---------EEEeCCHHHHHHHHHHHhCCC-------
Confidence            34444455544432  34456777777776    778888763         499999999999988876311       


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD  263 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id  263 (499)
                         ++..|+++..+|.++..++...|+   +++.++++++ ++.+|+++|+++|++++      .+|+   +++++|...
T Consensus        74 ---~gd~Vi~~~~~~~~~~~~~~~~G~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~------~~v~---~~~~~G~~~  137 (367)
T 3nyt_A           74 ---PGDEVITPGFTYVATAETVALLGA---KPVYVDIDPR-TYNLDPQLLEAAITPRT------KAII---PVSLYGQCA  137 (367)
T ss_dssp             ---TTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCTT-TCSBCGGGTGGGCCTTE------EEEC---CBCGGGCCC
T ss_pred             ---CcCEEEECCCccHHHHHHHHHcCC---EEEEEecCCc-cCCcCHHHHHHhcCcCC------cEEE---eeCCccChh
Confidence               466899999999999999999999   9999999865 37999999999985432      2444   677999999


Q ss_pred             ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEec--ccccccCCCcceEEEEeCchhHHHhhcCCc
Q 010842          264 NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFS--PHKWLLSYLDCCCLWVKQPGLLVKALSTDP  341 (499)
Q Consensus       264 ~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~--~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~  341 (499)
                      |+++|.++|+++|+++|+|++|+.+.......    .+. ..|.++++  +||+++.+..+|+++.+++...........
T Consensus       138 ~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~----~~~-~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~  212 (367)
T 3nyt_A          138 DFDAINAIASKYGIPVIEDAAQSFGASYKGKR----SCN-LSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIAR  212 (367)
T ss_dssp             CHHHHHHHHHHTTCCBEEECTTTTTCEETTEE----TTS-SSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTB
T ss_pred             hHHHHHHHHHHcCCEEEEECccccCCeECCee----ccC-CCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHh
Confidence            99999999999999999999997544322111    111 12777777  699998744577777766544322111110


Q ss_pred             cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----C
Q 010842          342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----H  416 (499)
Q Consensus       342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----~  416 (499)
                       +   ..     ...+....+..+.+...+..++.+..+  +.+++..++..++++++.+.|++. ++.+...+     .
T Consensus       213 -~---g~-----~~~~~~~~~g~~~~~~~~~aa~~~~~l--~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~  280 (367)
T 3nyt_A          213 -H---GQ-----DRRYHHIRVGVNSRLDTLQAAILLPKL--EIFEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVNNISV  280 (367)
T ss_dssp             -T---TE-----EETTEECSCCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTEECC
T ss_pred             -c---CC-----CcCceeeccCcCCCccHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhccC-CeeccCCCCCCcee
Confidence             0   00     000000011223334455555555554  567888889999999999999987 45543222     1


Q ss_pred             ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee--e------EC------------CEEEEEEeccCCCCcH
Q 010842          417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT--I------VG------------GLYMLRFAVGASLTDE  476 (499)
Q Consensus       417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~------~~------------g~~~lRi~~~~~~~t~  476 (499)
                      ...+.+...  .          .+.+.+.|.++|+.+....  .      +.            ....+|+.+ ++.+|+
T Consensus       281 ~~~~~~~~~--~----------~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~-~~~~t~  347 (367)
T 3nyt_A          281 YAQYTVRMD--N----------RESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPM-HPYLDT  347 (367)
T ss_dssp             CSSEEEECS--S----------HHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECC-CTTCCH
T ss_pred             eEEEEEEeC--C----------HHHHHHHHHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccC-CCCCCH
Confidence            223333332  1          3567777777786332111  0      11            135799998 699999


Q ss_pred             HHHHHHHHHHHHH
Q 010842          477 RHVVAAWELIMEG  489 (499)
Q Consensus       477 ~di~~l~~~l~~~  489 (499)
                      +||+++++.|++.
T Consensus       348 ~~i~~v~~~~~~~  360 (367)
T 3nyt_A          348 ASIKIICAALTNL  360 (367)
T ss_dssp             HHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHH
Confidence            9999999999764

>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*

Probab=99.89  E-value=1.1e-21  Score=198.97  Aligned_cols=299  Identities=14%  Similarity=0.102  Sum_probs=200.0

Q ss_pred             HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCC
Q 010842          131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGV  210 (499)
Q Consensus       131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~  210 (499)
                      ..++.+.+++++|.+..         +++++|+++|+.++.+.....         ++..|+++...|.++..+++..|.
T Consensus        93 ~~~l~~~la~~~~~~~~---------i~~~sG~~a~~~~~~~l~~~~---------~gd~Vl~~~~~~~~~~~~~~~~g~  154 (401)
T 2bwn_A           93 HRRLEAEIAGLHQKEAA---------LVFSSAYNANDATLSTLRVLF---------PGLIIYSDSLNHASMIEGIKRNAG  154 (401)
T ss_dssp             HHHHHHHHHHHTTCSEE---------EEESCHHHHHHHHHHHHHHHS---------TTCEEEEETTCCHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHhCCCcE---------EEECCcHHHHHHHHHHHhcCC---------CCCEEEECchhhHHHHHHHHHcCC
Confidence            33445558888887543         444556668877766542210         456788899999999999999999


Q ss_pred             CCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhc
Q 010842          211 SPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSAC  290 (499)
Q Consensus       211 g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~  290 (499)
                         +++.+|.+       |+++|++.++....  ..+.+|+++.++|++|.+.|+++|+++|++||+++++|++|+.+.+
T Consensus       155 ---~~~~v~~~-------d~~~le~~l~~~~~--~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~  222 (401)
T 2bwn_A          155 ---PKRIFRHN-------DVAHLRELIAADDP--AAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMY  222 (401)
T ss_dssp             ---CEEEECTT-------CHHHHHHHHHHSCT--TSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTS
T ss_pred             ---eEEEEcCC-------CHHHHHHHHHhhcc--CCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEecccccccc
Confidence               99999864       78999998864210  2356899999999999999999999999999999999999984432


Q ss_pred             cCccchhh--hcCC-CCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCCC
Q 010842          291 ICPEFRHY--LNGI-ERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTGR  366 (499)
Q Consensus       291 ~~~~~~~~--~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr  366 (499)
                       .+.....  ..++ +..|.+..+.+|+++.|.  |+++.+ +... +.+.. ...+....                .+.
T Consensus       223 -~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G--G~~~~~-~~~~-~~l~~~~~~~~~~~----------------~~~  281 (401)
T 2bwn_A          223 -GPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG--GYIAAS-ARMV-DAVRSYAPGFIFST----------------SLP  281 (401)
T ss_dssp             -STTSCCHHHHHTCGGGCSEEEEESSSTTCSCC--EEEEEC-HHHH-HHHHHHCHHHHTSB----------------CCC
T ss_pred             -CCCCceeeeccCccccCcEEEeechhhccCCC--CEEecC-HHHH-HHHHHhCcCceecC----------------CCC
Confidence             1111111  1222 246888889999998653  776654 3222 22211 11111100                010


Q ss_pred             CCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHH
Q 010842          367 RFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWV  446 (499)
Q Consensus       367 ~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l  446 (499)
                      ......+..+++.+...+++++.++..++++++.+.|++. +++++. +..++++|.+..         .....++.++|
T Consensus       282 ~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~---------~~~~~~~~~~L  350 (401)
T 2bwn_A          282 PAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMPIID-HGSHIVPVVIGD---------PVHTKAVSDML  350 (401)
T ss_dssp             HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCC-CSSSCEEEECCC---------HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCcccC-CCCCeEEEEeCC---------hHHHHHHHHHH
Confidence            1122344556666655667888999999999999999987 777663 455677776642         12245677777


Q ss_pred             H-hcCCEEEEeeeE---CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          447 N-STGRVYLTHTIV---GGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       447 ~-~~g~~~~~~~~~---~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      . +.|+.+.....+   .+..++|+++. ..+|++||++++++|+++.++
T Consensus       351 ~~~~gi~v~~~~~~~~~~~~~~iRis~~-~~~t~~~i~~~~~~l~~~~~~  399 (401)
T 2bwn_A          351 LSDYGVYVQPINFPTVPRGTERLRFTPS-PVHDLKQIDGLVHAMDLLWAR  399 (401)
T ss_dssp             HHHHCEECCEECTTTSCTTCCEEEECCC-TTSCHHHHHHHHHHHHHHC--
T ss_pred             HhcCCEEEeecCCCCCCCCCceEEEEee-CCCCHHHHHHHHHHHHHHHHh
Confidence            5 667543222211   23458999995 778999999999999987654

>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}

Probab=99.89  E-value=6.3e-23  Score=211.37  Aligned_cols=338  Identities=11%  Similarity=0.065  Sum_probs=222.4

Q ss_pred             hHHHHHHHHHHHccc-CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842          102 TAGFLGEMLCACFNS-VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA  180 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~  180 (499)
                      +|..+.+.+...+.. ....|....+..++++++.+|+.+.+|.+.+.     ...++|+|||+|+..++.+..+     
T Consensus        71 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~-----~~v~~t~G~~~al~~~~~~l~~-----  140 (447)
T 3b46_A           71 PPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKA-----ENVTVTTGANEGILSCLMGLLN-----  140 (447)
T ss_dssp             CCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCG-----GGEEEESHHHHHHHHHHHHHCC-----
T ss_pred             CCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh-----hhEEEeCCHHHHHHHHHHHHcC-----
Confidence            344566666666654 23456555567899999999998888864221     1469999999999988887632     


Q ss_pred             hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCC----------CCccCHHHHHHHHHHHHHcCCccEEE
Q 010842          181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDA----------NFSLSPQLLRRAVEADVEAGLVPLFL  250 (499)
Q Consensus       181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~----------~~~~d~~~L~~~i~~~~~~g~~p~~v  250 (499)
                            ++..|+++...|.++..+++..|.   +++.||+++++          +|.+|+++|+++++++      +.+|
T Consensus       141 ------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v  205 (447)
T 3b46_A          141 ------AGDEVIVFEPFFDQYIPNIELCGG---KVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSK------TKAV  205 (447)
T ss_dssp             ------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTT------EEEE
T ss_pred             ------CCCEEEEeCCCchhHHHHHHHcCC---EEEEEeCCCccccccccccccCcccCHHHHHHhhccC------CeEE
Confidence                  456788888999999999999999   99999987542          4789999999988632      4478


Q ss_pred             EEecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCc--cchhhhcCCCCCceeEecccccccCC-CcceE
Q 010842          251 CATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICP--EFRHYLNGIERVDSFSFSPHKWLLSY-LDCCC  324 (499)
Q Consensus       251 v~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~--~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~  324 (499)
                      +++.++|+||.+   +++++|+++|++||+++++|++|+.+.+..+  .......+....|.++.+.+|+++.| ..+|+
T Consensus       206 ~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~  285 (447)
T 3b46_A          206 IINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGW  285 (447)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEE
T ss_pred             EEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEE
Confidence            888999999999   5799999999999999999999987543211  11111011124788999999999744 45899


Q ss_pred             EEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhc-HHHHHHHHHHHHHHHHHHH
Q 010842          325 LWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYG-VLNLQSHIRSDIRLAKMFE  400 (499)
Q Consensus       325 l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g-~~g~~~~~~~~~~~a~~l~  400 (499)
                      ++.++++.. +.+.....+..                  .+  ...+...+   ++.... .+.++++.++..++++++.
T Consensus       286 ~~~~~~~l~-~~l~~~~~~~~------------------~~--~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~  344 (447)
T 3b46_A          286 VLSLNAELL-SYAAKAHTRIC------------------FA--SPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFT  344 (447)
T ss_dssp             EECSCHHHH-HHHHHHHHHHT------------------SS--CCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             EEeCCHHHH-HHHHHHHhhcc------------------CC--CChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHH
Confidence            988444333 22211000000                  00  01222222   333221 3457778888889999999


Q ss_pred             HHHhcCCCeEEEcCCCceEEEEEecCCCCCCcc----hh--HHHHHHHHHHHHh-cCCEEEEeeeEC-------CEEEEE
Q 010842          401 GFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSA----DT--EMLNRKLLDWVNS-TGRVYLTHTIVG-------GLYMLR  466 (499)
Q Consensus       401 ~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~----~~--~~~~~~l~~~l~~-~g~~~~~~~~~~-------g~~~lR  466 (499)
                      +.|++. ++++..+.....+++.+.....-...    ..  .....++.++|.+ .|+.+..+..+.       +..++|
T Consensus       345 ~~L~~~-g~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iR  423 (447)
T 3b46_A          345 SIFDEL-GLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLR  423 (447)
T ss_dssp             HHHHHH-TCCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEE
T ss_pred             HHHHHC-CCeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEE
Confidence            999987 78776444444555666431000000    00  0123467777764 675444333332       246899


Q ss_pred             EeccCCCCcHHHHHHHHHHHHHH
Q 010842          467 FAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       467 i~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      ++++   .++++|++++++|.++
T Consensus       424 ls~~---~~~e~l~~~~~~l~~~  443 (447)
T 3b46_A          424 FAVC---KDDAYLENAVERLKLL  443 (447)
T ss_dssp             EECC---SCHHHHHHHHHHGGGG
T ss_pred             EEEe---CCHHHHHHHHHHHHHH
Confidence            9996   3789999999998763

>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...

Probab=99.89  E-value=3.5e-22  Score=202.74  Aligned_cols=311  Identities=12%  Similarity=0.087  Sum_probs=203.8

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..+...++|+++++++++++|.+...        +++++||+|+..++.++..           ++..|+++..+|.++.
T Consensus        63 ~~~~~~~l~~~~r~~la~~~g~~~~~--------i~~~sGt~a~~~a~~~~~~-----------~gd~Vl~~~~~~~~~~  123 (405)
T 2vi8_A           63 GCEYVDIVEELARERAKQLFGAEHAN--------VQPHSGAQANMAVYFTVLE-----------HGDTVLGMNLSHGGHL  123 (405)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHTCSEEE--------CCCSSHHHHHHHHHHHHCC-----------TTCEEEEECGGGTCCT
T ss_pred             cchHHHHHHHHHHHHHHHHhCCCceE--------EEecCcHHHHHHHHHHhcC-----------CCCEEEEecccccchh
Confidence            34667789988999999999987542        5556779999988887732           4567888888887764


Q ss_pred             H-H--HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842          203 K-V--CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV  279 (499)
Q Consensus       203 k-a--~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l  279 (499)
                      . .  +...|.+. .++.++++++ ++.+|+++|++++++..     +.+|++ .+ +..|...|+++|.++|++||+++
T Consensus       124 ~~~~~~~~~g~~~-~~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~~~v~~-~~-~~~~~~~~l~~i~~l~~~~~~~l  194 (405)
T 2vi8_A          124 THGSPVNFSGVQY-NFVAYGVDPE-THVIDYDDVREKARLHR-----PKLIVA-AA-AAYPRIIDFAKFREIADEVGAYL  194 (405)
T ss_dssp             TTTCTTSHHHHHS-EEEEECBCTT-TCSBCHHHHHHHHHHHC-----CSEEEE-CC-SSCCSCCCHHHHHHHHHHHTCEE
T ss_pred             cccchhhhcccee-EEEecccccc-cCCcCHHHHHHHHHhcC-----CeEEEE-eC-CCCCccCCHHHHHHHHHHcCCEE
Confidence            3 1  12323211 5667776533 46899999999997631     224444 33 34577789999999999999999


Q ss_pred             EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC-ccCCCCCCCCCCCcccCC
Q 010842          280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD-PEYLKNKPSESNSVVDFK  358 (499)
Q Consensus       280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~-~~yl~~~~~~~~~~~~~~  358 (499)
                      |+|++|+.+....+...   ..+...|+++.++||++++|.| |++++++ +.. +.+... ..+..             
T Consensus       195 i~Dea~~~g~~~~~~~~---~~~~~~di~~~s~sK~~~g~~g-G~~~~~~-~~~-~~l~~~~~~~~~-------------  255 (405)
T 2vi8_A          195 MVDMAHIAGLVAAGLHP---NPVPYAHFVTTTTHKTLRGPRG-GMILCQE-QFA-KQIDKAIFPGIQ-------------  255 (405)
T ss_dssp             EEECTTTHHHHHTTSSC---CSTTTCSEEEEESSSTTCCCSC-EEEEECH-HHH-HHHHHHHTTTTC-------------
T ss_pred             EEEccccccccccCcCC---CccccCCEEEEeccccCCCCCC-eEEEEcH-HHH-HHHHhhhccccc-------------
Confidence            99999985433221111   1233589999999999987777 8888763 322 222111 01100             


Q ss_pred             CcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcchhH
Q 010842          359 DWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSADTE  436 (499)
Q Consensus       359 ~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~  436 (499)
                           ++... ....+..++..+..++++++.++..++++++.+.|++. +++++.+ ...+.+++.+....        
T Consensus       256 -----~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~--------  321 (405)
T 2vi8_A          256 -----GGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLVSGGTDNHLLLVDLRPQQ--------  321 (405)
T ss_dssp             -----SSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT--------
T ss_pred             -----CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEecCCCCceEEEEEccCCC--------
Confidence                 01011 11223344554444678899999999999999999998 8888754 34567777765311        


Q ss_pred             HHHHHHHHHHHhcCCEEEEee------eECCEEEEEEeccC---CCCcHHHHHHHHHHHHHHHHHHh
Q 010842          437 MLNRKLLDWVNSTGRVYLTHT------IVGGLYMLRFAVGA---SLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       437 ~~~~~l~~~l~~~g~~~~~~~------~~~g~~~lRi~~~~---~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      .....+.+.|.++|+.+..+.      ...+..++|+++..   +.++++|+++++++|+++.+++.
T Consensus       322 ~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~~  388 (405)
T 2vi8_A          322 LTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNVG  388 (405)
T ss_dssp             CCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCTT
T ss_pred             CCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhccc
Confidence            013456667777785443321      01123569999852   14689999999999999876543

>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}

Probab=99.89  E-value=3.3e-21  Score=197.13  Aligned_cols=327  Identities=16%  Similarity=0.087  Sum_probs=211.2

Q ss_pred             HHHHHHHHHHHcccCCccccc-ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          103 AGFLGEMLCACFNSVGFNWLA-SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~-~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      |..+.+.+...+..+  .|.. ++...+++++    +++++|.+.         .++|+|||+|+..++.+..       
T Consensus        31 p~~~~~a~~~~~~~~--~y~~~~~~~~~l~~~----la~~~~~~~---------v~~~~ggt~al~~~l~~l~-------   88 (424)
T 2po3_A           31 RARLYERLDRALDSQ--WLSNGGPLVREFEER----VAGLAGVRH---------AVATCNATAGLQLLAHAAG-------   88 (424)
T ss_dssp             HHHHHHHHHHHHHHT--CCSSSCHHHHHHHHH----HHHHHTSSE---------EEEESCHHHHHHHHHHHHT-------
T ss_pred             hHHHHHHHHHHHhcC--CcccCCHHHHHHHHH----HHHHhCCCe---------EEEeCCHHHHHHHHHHHcC-------
Confidence            444555555555432  2444 5666667666    677777642         4999999999998888763       


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                           ++..|+++..+|.++..++...|+   +++.+|++++ ++.+|+++|+++++++      +.+|+++   +++|.
T Consensus        89 -----~gd~Vlv~~~~~~~~~~~~~~~G~---~~~~v~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~---~~tG~  150 (424)
T 2po3_A           89 -----LTGEVIMPSMTFAATPHALRWIGL---TPVFADIDPD-TGNLDPDQVAAAVTPR------TSAVVGV---HLWGR  150 (424)
T ss_dssp             -----CCSEEEEESSSCTHHHHHHHHTTC---EEEEECBCTT-TSSBCHHHHGGGCCTT------EEEEEEE---CGGGC
T ss_pred             -----CCCEEEECCCccHHHHHHHHHcCC---EEEEEecCCC-cCCcCHHHHHHhhCcC------CcEEEEE---CCCCC
Confidence                 235788899999999999999999   9999999863 4789999999988643      3355554   37999


Q ss_pred             cCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccc--ccccCCCcceEEEEeCchhHHHhhcC
Q 010842          262 VDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPH--KWLLSYLDCCCLWVKQPGLLVKALST  339 (499)
Q Consensus       262 id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~h--K~l~~p~~~g~l~~r~~~~l~~~~~~  339 (499)
                      +.++++|+++|+++|+++++|++|+.+.....  .. +..  ..|.++.++|  |+++. ..+|+++.++++........
T Consensus       151 ~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~--~~-~~~--~~di~~~S~sk~K~l~~-~~~G~~v~~~~~l~~~l~~~  224 (424)
T 2po3_A          151 PCAADQLRKVADEHGLRLYFDAAHALGCAVDG--RP-AGS--LGDAEVFSFHATKAVNA-FEGGAVVTDDADLAARIRAL  224 (424)
T ss_dssp             CCCHHHHHHHHHHTTCEEEEECTTCTTCEETT--EE-TTS--SSSEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCEEEEECccccCCeECC--ee-ccc--ccCEEEEeCCCCCCccC-CCCeEEEeCCHHHHHHHHHH
Confidence            99999999999999999999999984322211  11 111  1466666665  88875 56787777654433221111


Q ss_pred             CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC---
Q 010842          340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH---  416 (499)
Q Consensus       340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~---  416 (499)
                      . .+....      .+...  ......++..+..++++..  .++++++.++..++++++.+.|+++|++++..++.   
T Consensus       225 ~-~~~~~~------~~~~~--~~g~~~~~~~~~aa~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~  293 (424)
T 2po3_A          225 H-NFGFDL------PGGSP--AGGTNAKMSEAAAAMGLTS--LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRHGL  293 (424)
T ss_dssp             H-BTTTTC------TTCCT--TCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGGSC
T ss_pred             H-hcCccc------ccccc--ccCcCCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCCCc
Confidence            0 000000      00000  1112224445555555543  36788888999999999999999988998875332   


Q ss_pred             --ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee--eEC------C------E-------EEEEEeccCCC
Q 010842          417 --FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT--IVG------G------L-------YMLRFAVGASL  473 (499)
Q Consensus       417 --~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~~------g------~-------~~lRi~~~~~~  473 (499)
                        +.++.+.+.+..      ......++.+.|.+.|+.+....  ...      +      .       ..+|+++ +..
T Consensus       294 ~~~~~~~i~~~~~~------~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~-~~~  366 (424)
T 2po3_A          294 NNHQYVIVEIDEAT------TGIHRDLVMEVLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPT-GTA  366 (424)
T ss_dssp             CCCCCEEEEECHHH------HSSCHHHHHHHHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECC-STT
T ss_pred             cccEEEEEEECCcc------chhhHHHHHHHHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeC-CCC
Confidence              245556554200      00013567777777785432211  000      0      0       1277776 588


Q ss_pred             CcHHHHHHHHHHHHHHHHHH
Q 010842          474 TDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       474 ~t~~di~~l~~~l~~~~~~l  493 (499)
                      +|++|+++++++|+++.++.
T Consensus       367 ~t~e~i~~~~~~L~~~~~~~  386 (424)
T 2po3_A          367 IGDDDIRRVADLLRLCATRG  386 (424)
T ss_dssp             CCHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhhh
Confidence            99999999999999887654

>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}

Probab=99.89  E-value=3.2e-22  Score=203.32  Aligned_cols=326  Identities=10%  Similarity=-0.011  Sum_probs=218.1

Q ss_pred             HHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          105 FLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       105 ~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      .+.+.+...+... ...|...++..++++++.+|+.+.+|.+.+.    ....++|+|+|+|+..++.+..+        
T Consensus        64 ~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~v~~t~G~~~al~~~~~~l~~--------  131 (404)
T 2o1b_A           64 GIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDK----EDEVCILYGTKNGLVAVPTCVIN--------  131 (404)
T ss_dssp             HHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCT----TTSEEEESSHHHHHHHHHHHHCC--------
T ss_pred             HHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----cccEEEcCCcHHHHHHHHHHhcC--------
Confidence            4555555555321 2235444567899999999999988975110    01368999999999888877632        


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD  263 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id  263 (499)
                         ++..|+++..+|.++..+++..|.   +++.+|.+++ ++.+|+++|++++++++      .+|+++.++|++|.+-
T Consensus       132 ---~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~~------~~v~l~~p~nptG~~~  198 (404)
T 2o1b_A          132 ---PGDYVLLPDPGYTDYLAGVLLADG---KPVPLNLEPP-HYLPDWSKVDSQIIDKT------KLIYLTYPNNPTGSTA  198 (404)
T ss_dssp             ---TTCEEEEEESCCSSHHHHHHHTTC---EEEEEECCTT-TCCCCGGGSCHHHHHHE------EEEEECSSCTTTCCCC
T ss_pred             ---CCCEEEEcCCCchhHHHHHHHCCC---EEEEeccCcc-cCcCCHHHHHHhhccCc------eEEEEcCCCCCCCccC
Confidence               456788888999999999999999   9999998863 47899999999997543      3677788999999996


Q ss_pred             C---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcC--CCCCceeEecccccccCC-CcceEEEEeCchhHHHhh
Q 010842          264 N---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNG--IERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKAL  337 (499)
Q Consensus       264 ~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g--~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~  337 (499)
                      |   +++|+++|+++|+++++|++|+.+.+.. .......-  ....+.++.++||+++.| ..+|+++.++ +.. +.+
T Consensus       199 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-~~~-~~l  275 (404)
T 2o1b_A          199 TKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDA-KNPSILASENGKDVAIEIYSLSKGYNMSGFRVGFAVGNK-DMI-QAL  275 (404)
T ss_dssp             CHHHHHHHHHHHTTSSCEEEEECTTTTCBSSS-CCCCGGGSTTHHHHEEEEEESTTTTTCGGGCCEEEEECH-HHH-HHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCChhhcCCCCCCEEEEEecchhccCchhheEeEecCH-HHH-HHH
Confidence            5   7899999999999999999998764321 11111111  112467889999999744 4578887743 322 222


Q ss_pred             cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842          338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR  415 (499)
Q Consensus       338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~  415 (499)
                      .....+..                  .  ....+..+++...+  +.+.+++..++..++++++.+.|++. ++++.. +
T Consensus       276 ~~~~~~~~------------------~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~-~  333 (404)
T 2o1b_A          276 KKYQTHTN------------------A--GMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA-DLPFVH-A  333 (404)
T ss_dssp             HHHHHHHC------------------C--CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEC-C
T ss_pred             HHHHhhcc------------------C--CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc-CCeecC-C
Confidence            11100000                  0  01233344444433  35667888888889999999999988 787764 4


Q ss_pred             Cce-EEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          416 HFA-LVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       416 ~~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      ..+ .+++++....         ...++.++|. +.|+.+..+..+.  +..++|++++ .  ++++|+++++.|.++.+
T Consensus       334 ~~g~~~~~~~~~~~---------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~-~--~~e~l~~~l~~l~~~l~  401 (404)
T 2o1b_A          334 KGGIYVWLETPPGY---------DSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLA-L--DDQKLDEAAIRLTELAY  401 (404)
T ss_dssp             CBSSEEEEECCTTC---------CHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECC-S--CTTHHHHHHHHHHGGGG
T ss_pred             CcceEEEEeCCCCC---------CHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEc-C--CHHHHHHHHHHHHHHHH
Confidence            434 3556664210         0345666665 4575544433332  2467999996 3  67899999999987754


Q ss_pred             H
Q 010842          492 R  492 (499)
Q Consensus       492 ~  492 (499)
                      +
T Consensus       402 ~  402 (404)
T 2o1b_A          402 L  402 (404)
T ss_dssp             G
T ss_pred             h
Confidence            3

>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A

Probab=99.89  E-value=6.1e-22  Score=204.23  Aligned_cols=316  Identities=12%  Similarity=0.052  Sum_probs=188.9

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..+...++|+.+++++++++|.+.+.+    +..++++|||+||..++.+..+           ++..|+++...|.+..
T Consensus        94 G~~~~~~lE~~a~~~~a~l~g~~~~~~----~~~v~~~sGt~An~~al~al~~-----------pGD~Vl~~~~~h~g~l  158 (490)
T 2a7v_A           94 GAEVVDEIELLCQRRALEAFDLDPAQW----GVNVQPYSGSPANLAVYTALLQ-----------PHDRIMGLDLPDGGHL  158 (490)
T ss_dssp             ----CTHHHHHHHHHHHHHTTCCTTTE----EEECCCSSHHHHHHHHHHHHCC-----------SCEECCC---------
T ss_pred             ccHHHHHHHHHHHHHHHHHcCCCcccC----ceEEeCCchHHHHHHHHHHHcC-----------CCCEecccCccccccc
Confidence            345567999999999999999986410    0125667999999998887642           6788988887775421


Q ss_pred             --------HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH
Q 010842          203 --------KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE  274 (499)
Q Consensus       203 --------ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~  274 (499)
                              +.+...|... .++.++++++ ++.+|+++|++++.+..     |.+|++..+  .+|.+.|+++|+++|++
T Consensus       159 ~h~~~~~~~~i~~~g~~~-~~~~~~vd~~-~~~iD~d~le~~l~~~~-----~klIi~~~s--~~~~~~dl~~i~~ia~~  229 (490)
T 2a7v_A          159 THGYMSDVKRISATSIFF-ESMPYKLNPK-TGLIDYNQLALTARLFR-----PRLIIAGTS--AYARLIDYARMREVCDE  229 (490)
T ss_dssp             -----------------------CCBCTT-TCSBCHHHHHHHHHHHC-----CSEEEECCS--SCCSCCCHHHHHHHHHH
T ss_pred             cchhhhcchhHHHcCCeE-EEEecccccc-cCCcCHHHHHHHHhhcC-----CcEEEEcCC--CCCCcccHHHHHHHHHH
Confidence                    1334556511 2334445533 47999999999997531     335555443  34667899999999999


Q ss_pred             hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCch-------------hHHHhhcCCc
Q 010842          275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPG-------------LLVKALSTDP  341 (499)
Q Consensus       275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~-------------~l~~~~~~~~  341 (499)
                      ||+++|+|+||+.+....+.....+   ..+|++++++||++++|.| |+++.++..             .+.+.+..  
T Consensus       230 ~g~~livD~Ah~~glv~~g~~~~~~---~~aDiv~~S~hK~l~Gp~G-G~i~~~~~~~~~~~~~~~~~~~~l~~~i~~--  303 (490)
T 2a7v_A          230 VKAHLLADMAHISGLVAAKVIPSPF---KHADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGREIPYTFEDRINF--  303 (490)
T ss_dssp             TTCEEEEECGGGHHHHHTTSSCCGG---GTCSEEEEESSGGGCSCSC-EEEEEECSEEEEETTTEEEEECCCHHHHHH--
T ss_pred             cCCEEEEccccccccccCCcCCCCC---CCCCEEEECCcccCccccc-hheeeccchhcccccccchhhHHHHHHHHH--
Confidence            9999999999875543322211112   2589999999999988865 888887641             01111100  


Q ss_pred             cCCCCCCCCCCCcccCCCcccCCCCCCCc-HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceE
Q 010842          342 EYLKNKPSESNSVVDFKDWQVGTGRRFKS-LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFAL  419 (499)
Q Consensus       342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~  419 (499)
                       .++.              +.+++..... ..+..+++..-.+.++++.++..+++++|++.|++. |++++.+ ...++
T Consensus       304 -~~~~--------------g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~~-G~~v~~~~t~t~l  367 (490)
T 2a7v_A          304 -AVFP--------------SLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHL  367 (490)
T ss_dssp             -HHTT--------------TTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred             -Hhcc--------------cCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc-CcEEecCCCCCeE
Confidence             0010              0112211111 222334444333466888899999999999999986 8998753 45567


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-----CEEEEEEec---cCCCCcHHHHHHHHHHHHHHHH
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-----GLYMLRFAV---GASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----g~~~lRi~~---~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      +.+.+.+.+      .  ...++.+.|.+.|+.+-..+...     ....+|+++   ++...+++|++++++.|.++..
T Consensus       368 v~vdl~~~g------~--~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~  439 (490)
T 2a7v_A          368 VLVDLRPKG------L--DGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN  439 (490)
T ss_dssp             EEEECTTTT------C--CHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCC------C--CHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHH
Confidence            777765432      0  13446666667775433221111     124699965   2344689999999999988775


Q ss_pred             H
Q 010842          492 R  492 (499)
Q Consensus       492 ~  492 (499)
                      .
T Consensus       440 ~  440 (490)
T 2a7v_A          440 I  440 (490)
T ss_dssp             H
T ss_pred             h
Confidence            3

>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}

Probab=99.89  E-value=2.8e-21  Score=201.45  Aligned_cols=334  Identities=15%  Similarity=0.084  Sum_probs=215.8

Q ss_pred             CcccccChhhHHHHHHHHHHHHHHcC-CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCC
Q 010842          118 GFNWLASPASTELEIVVMDWLATMLK-LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSD  195 (499)
Q Consensus       118 ~~~~~~~p~~~~lE~~~~~~la~l~g-~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~  195 (499)
                      ...|..+.+...+++++.+|+.+..| ++.+.     ...++|+|+++|+.+++.+..+.        |. ++..|+++.
T Consensus       122 ~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~-----~~i~~t~G~~~ai~~~~~~l~~~--------gd~~~d~Vlv~~  188 (498)
T 3ihj_A          122 LGSYSASQGVNCIREDVAAYITRRDGGVPADP-----DNIYLTTGASDGISTILKILVSG--------GGKSRTGVMIPI  188 (498)
T ss_dssp             ------CCSCHHHHHHHHHHHHHHTTTCCCCG-----GGEEEESSHHHHHHHHHHHHCCC--------CGGGSEEEEEEE
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCc-----ccEEEcCCHHHHHHHHHHHHcCC--------CCCCCCEEEEeC
Confidence            35677778888999999999999985 64221     25699999999998887765321        11 235899999


Q ss_pred             CCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHH
Q 010842          196 QTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVA  272 (499)
Q Consensus       196 ~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia  272 (499)
                      +.|.++..+++..|.   .++.++++++++|.+|+++|++++++... +..+.+|+++.++||||.+   +++++|+++|
T Consensus       189 p~y~~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~~le~~l~~~~~-~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la  264 (498)
T 3ihj_A          189 PQYPLYSAVISELDA---IQVNYYLDEENCWALNVNELRRAVQEAKD-HCDPKVLCIINPGNPTGQVQSRKCIEDVIHFA  264 (498)
T ss_dssp             SCCTHHHHHHHHTTC---EEEEEECBGGGTTBCCHHHHHHHHHHHTT-TSEEEEEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred             CCchhHHHHHHHcCC---EEEEeeccccccCCCCHHHHHHHHHhhhc-cCCCeEEEEECCCCCCCCcCCHHHHHHHHHHH
Confidence            999999999999999   99999999876799999999999987532 2245678888999999999   5578899999


Q ss_pred             HHhCCEEEeeccccchhccCc-c---chhhhcCC-----CCCce-eEeccccccc--CCCcceEEEE--eCchhHHHhhc
Q 010842          273 NEYGIWVHVDAAYAGSACICP-E---FRHYLNGI-----ERVDS-FSFSPHKWLL--SYLDCCCLWV--KQPGLLVKALS  338 (499)
Q Consensus       273 ~~~~~~lhvD~A~g~~~~~~~-~---~~~~~~g~-----~~aDs-i~~~~hK~l~--~p~~~g~l~~--r~~~~l~~~~~  338 (499)
                      ++||+++++|.+|+.+.+... .   .......+     ..... +..+.+|.+.  ....+|++.+  .++... +.+.
T Consensus       265 ~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~-~~l~  343 (498)
T 3ihj_A          265 WEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIK-GQLV  343 (498)
T ss_dssp             HHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHH-HHHH
T ss_pred             HHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHH-HHHH
Confidence            999999999999987654211 1   11111111     11223 4558899984  3456788775  444332 2221


Q ss_pred             CC-ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc------------HHHHHHHHHHHHHHHHHHHHHHhc
Q 010842          339 TD-PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG------------VLNLQSHIRSDIRLAKMFEGFVKS  405 (499)
Q Consensus       339 ~~-~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g------------~~g~~~~~~~~~~~a~~l~~~L~~  405 (499)
                      .. ..++.                      ...+..++....+.            .+..+++.++..++++++.+.|++
T Consensus       344 ~~~~~~~~----------------------~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~  401 (498)
T 3ihj_A          344 KLLSVRLC----------------------PPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQ  401 (498)
T ss_dssp             HHHHHSCC----------------------CCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHhccCC----------------------CCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            11 01110                      01233333333331            122345667788899999999999


Q ss_pred             CCCeEEEcCCCceEEEE-EecCCCCCCc--chhHHHHHH--HHHHHHhcCCEEEEeeeE---CCEEEEEEeccCCCCcHH
Q 010842          406 DPRFEIVVPRHFALVCF-RLNPYPHSGS--ADTEMLNRK--LLDWVNSTGRVYLTHTIV---GGLYMLRFAVGASLTDER  477 (499)
Q Consensus       406 ~~~~~~~~~~~~~~v~f-~~~~~~~~~~--~~~~~~~~~--l~~~l~~~g~~~~~~~~~---~g~~~lRi~~~~~~~t~~  477 (499)
                      +|++++. +|..+++.| ++..+.....  ...+.....  +.+.|.+.|+.+..+..+   .+..++|+++.   .+++
T Consensus       402 ~~g~~~~-~p~gg~~~~~~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~---~~~e  477 (498)
T 3ihj_A          402 VPGIHCN-PLQGAMYAFPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTIL---PPVE  477 (498)
T ss_dssp             STTEECC-CCCBSSEECCEECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECC---SCHH
T ss_pred             CCCcEec-CCCeEEEEEEeccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeC---CCHH
Confidence            9999876 555555555 4432100000  000000122  234455678766654443   34568999994   6899


Q ss_pred             HHHHHHHHHHHHHHHHhc
Q 010842          478 HVVAAWELIMEGADRLFK  495 (499)
Q Consensus       478 di~~l~~~l~~~~~~l~~  495 (499)
                      ++++++++|.++.+++.+
T Consensus       478 ~l~~~i~~L~~~~~~~~~  495 (498)
T 3ihj_A          478 KLKTVLQKVKDFHINFLE  495 (498)
T ss_dssp             HHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHH
Confidence            999999999999887754

>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*

Probab=99.89  E-value=6.5e-22  Score=200.62  Aligned_cols=287  Identities=16%  Similarity=0.175  Sum_probs=195.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH--
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC--  205 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~--  205 (499)
                      .....++.+++++++|.+.         .+++++||+|+..++.+...           ++..|+++...|.++...+  
T Consensus        63 ~~~~~~l~~~la~~~g~~~---------~i~~~sG~~a~~~~l~~~~~-----------~gd~vi~~~~~~~~~~~~~~~  122 (398)
T 2rfv_A           63 NPTTDALEKKLAVLERGEA---------GLATASGISAITTTLLTLCQ-----------QGDHIVSASAIYGCTHAFLSH  122 (398)
T ss_dssp             CHHHHHHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSSCHHHHHHHHT
T ss_pred             ChHHHHHHHHHHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCCcccHHHHHHH
Confidence            4455666677999999863         37888899999988887632           4567888999999988876  


Q ss_pred             --HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeec
Q 010842          206 --KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDA  283 (499)
Q Consensus       206 --~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~  283 (499)
                        +..|.   +++.+|.+       |+++|+++++++      +.+|+++.++|++|.+.|+++|+++|++||+++|+|+
T Consensus       123 ~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De  186 (398)
T 2rfv_A          123 SMPKFGI---NVRFVDAA-------KPEEIRAAMRPE------TKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDN  186 (398)
T ss_dssp             HHHHTTC---EEEEECTT-------SHHHHHHHCCTT------EEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEEC
T ss_pred             HHHHcCC---EEEEeCCC-------CHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEEC
Confidence              77888   88888863       789999888643      4588889999999999999999999999999999999


Q ss_pred             cccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcc
Q 010842          284 AYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQ  361 (499)
Q Consensus       284 A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~  361 (499)
                      +|+.+....+    ...   .+|+++.++||+++.|.+  +|+++.+++. +...+........                
T Consensus       187 ~~~~~~~~~~----~~~---~~di~~~s~sK~~~~~g~~~~G~~~~~~~~-~~~~~~~~~~~~~----------------  242 (398)
T 2rfv_A          187 TFMSPYCQQP----LQL---GADIVVHSVTKYINGHGDVIGGIIVGKQEF-IDQARFVGLKDIT----------------  242 (398)
T ss_dssp             TTTCTTTCCG----GGG---TCSEEEEETTTTTTCSSCCCCEEEEECHHH-HHHHHHTHHHHTT----------------
T ss_pred             CCcccccCCc----hhh---CCcEEEEeCcccccCCCCceEEEEEECHHH-HHHHHHHHHHhCC----------------
Confidence            9986644221    111   389999999999988876  6888877542 2211111000000                


Q ss_pred             cCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE--------------cC---CCceEEEEEe
Q 010842          362 VGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV--------------VP---RHFALVCFRL  424 (499)
Q Consensus       362 ~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~--------------~~---~~~~~v~f~~  424 (499)
                         +-....+..|+.++.+  +.+..++++..++++.+.+.|++.+.++-+              .+   ...++++|.+
T Consensus       243 ---~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~  317 (398)
T 2rfv_A          243 ---GGCMSPFNAWLTLRGV--KTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEI  317 (398)
T ss_dssp             ---CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEE
T ss_pred             ---CCCCCHHHHHHHHhhh--hhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEE
Confidence               0011345566666655  345566677777888888888876543322              11   2467888877


Q ss_pred             cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee-e---------------------ECC--EEEEEEeccCCCCcHHHHH
Q 010842          425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT-I---------------------VGG--LYMLRFAVGASLTDERHVV  480 (499)
Q Consensus       425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~---------------------~~g--~~~lRi~~~~~~~t~~di~  480 (499)
                      .+.        .....++.+++...|.. ++.+ .                     ..|  ..++|++++ ..+++++|+
T Consensus       318 ~~~--------~~~~~~l~~~~~~~~i~-~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~-~~~~~~~i~  387 (398)
T 2rfv_A          318 AGG--------LEAGRRMINSVELCLLA-VSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVG-LEDPEDIIN  387 (398)
T ss_dssp             TTH--------HHHHHHHHTTCSSSEEC-SCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECC-SSCHHHHHH
T ss_pred             cCC--------HHHHHHHHHhCCcceec-cCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEec-CCCHHHHHH
Confidence            531        12234455544333321 1111 0                     012  468999996 788999999


Q ss_pred             HHHHHHHHH
Q 010842          481 AAWELIMEG  489 (499)
Q Consensus       481 ~l~~~l~~~  489 (499)
                      +++++|+++
T Consensus       388 ~l~~al~~~  396 (398)
T 2rfv_A          388 DLEHAIRKA  396 (398)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhh
Confidence            999998764

>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}

Probab=99.89  E-value=1.3e-21  Score=196.69  Aligned_cols=311  Identities=9%  Similarity=0.045  Sum_probs=203.0

Q ss_pred             ChhhHHHHHHHHHHH-HHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          124 SPASTELEIVVMDWL-ATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       124 ~p~~~~lE~~~~~~l-a~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      +|...++|++    + ++++|...        ..++++|||+|+..++.+..-.          ++..|+++..+|.++.
T Consensus        35 ~~~~~~l~~~----~~a~~~g~~~--------~~v~~~sgt~al~~al~~l~~~----------~Gd~Vi~~~~~~~~~~   92 (377)
T 3ju7_A           35 GPINQRFEQT----IMSGFFQNRG--------AVTTVANATLGLMAAIQLKKRK----------KGKYALMPSFTFPATP   92 (377)
T ss_dssp             CHHHHHHHHH----HHHHTSTTCS--------EEEEESCHHHHHHHHHHHHSCT----------TCCEEEEESSSCTHHH
T ss_pred             CHHHHHHHHH----HHHHHhCCCC--------eEEEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCCcHHHH
Confidence            6777888887    7 88888322        2499999999999888765111          5778999999999999


Q ss_pred             HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHH-HHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEe
Q 010842          203 KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAV-EADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHV  281 (499)
Q Consensus       203 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i-~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhv  281 (499)
                      .++...|+   +++.++++++ +|.+|+++|++++ +++.    ++.+|+   +++++|.+.|+++|+++|+ +|+++|+
T Consensus        93 ~~~~~~G~---~~~~v~~~~~-~~~~d~~~l~~~i~~~~~----~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~  160 (377)
T 3ju7_A           93 LAAIWCGL---EPYFIDISID-DWYMDKTVLWDKIEELKE----EVAIVV---PYATFGSWMNLEEYEELEK-KGVPVVV  160 (377)
T ss_dssp             HHHHHTTC---EEEEECBCTT-TCSBCHHHHHHHHHHHGG----GEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEE
T ss_pred             HHHHHcCC---EEEEEecCCc-cCCcCHHHHHHHHhcCCC----CceEEE---EECCCCCccCHHHHHHHHh-cCCEEEE
Confidence            99999999   9999999854 5899999999998 4430    122444   5668999999999999999 9999999


Q ss_pred             eccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcc
Q 010842          282 DAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQ  361 (499)
Q Consensus       282 D~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~  361 (499)
                      |++|+.+.....  +........++.+++++||++++ ...|++++++++...+...... +-...        .+....
T Consensus       161 D~a~a~g~~~~~--~~~g~~~~d~~~~S~~~~K~l~~-g~gG~~~~~~~~l~~~~~~~~~-~g~~~--------~~~~~~  228 (377)
T 3ju7_A          161 DAAPGFGLMNGG--MHYGQDFSGMIIYSFHATKPFGI-GEGGLIYSKNEEDIQRIKRMGN-FGFDT--------NRECTM  228 (377)
T ss_dssp             ECTTCTTCEETT--EETTTTCSSEEEEECBTTSSSCC-BSCEEEEESCHHHHHHHHHHTB-TTBCT--------TSCBCS
T ss_pred             ECCCccCCeECC--EeccCCCCcEEEEECCCCCcCCC-CCcEEEEECCHHHHHHHHHHHh-cCCCC--------CCceee
Confidence            999975543211  11101122356677778999987 4677777777653322211110 00000        000001


Q ss_pred             cCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-EcCC----Cc-eEEEEEecCCCCCCcchh
Q 010842          362 VGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI-VVPR----HF-ALVCFRLNPYPHSGSADT  435 (499)
Q Consensus       362 ~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~-~~~~----~~-~~v~f~~~~~~~~~~~~~  435 (499)
                      .....+...+..++.+..+  +.+++++++..++++++.+.|++++++.+ +.++    .. ..+.++.....       
T Consensus       229 ~g~~~~~~~~~aa~~~~~l--~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  299 (377)
T 3ju7_A          229 MGFNCKMSEYAAAIGIATM--KKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPILCPEEV-------  299 (377)
T ss_dssp             SCCBCCCCHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEECCTTS-------
T ss_pred             ccccCCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEEeCChh-------
Confidence            1122233455555555544  78889999999999999999998875421 1111    11 12344443210       


Q ss_pred             HHHHHHHHHHHHhcCCEEEEee--e------EC-------------CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          436 EMLNRKLLDWVNSTGRVYLTHT--I------VG-------------GLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       436 ~~~~~~l~~~l~~~g~~~~~~~--~------~~-------------g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                        ..+++.+.|.++|+..-.+.  .      +.             ....+|+.+ ++.+|++|++++++.|+++...
T Consensus       300 --~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~-~~~~t~~di~~v~~~l~~~~~~  374 (377)
T 3ju7_A          300 --RNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPL-WEGMTKEIVEQIVICLGQKVVS  374 (377)
T ss_dssp             --CHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECC-CTTCCHHHHHHHHHHHTC----
T ss_pred             --hHHHHHHHHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCC-CCCCCHHHHHHHHHHHHHHHhc
Confidence              14678888888886332211  1      01             135799998 6999999999999999877653

>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*

Probab=99.89  E-value=1.1e-21  Score=198.83  Aligned_cols=286  Identities=15%  Similarity=0.112  Sum_probs=194.6

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|...++|+    .+++++|.+.         .+++++||+|+..++.+...           ++..|+++...|.++.
T Consensus        63 ~~~~~~~l~~----~la~~~g~~~---------~i~~~sG~~a~~~~l~~~~~-----------~gd~vl~~~~~~~~~~  118 (398)
T 1gc0_A           63 SNPTLNLLEA----RMASLEGGEA---------GLALASGMGAITSTLWTLLR-----------PGDEVLLGNTLYGCTF  118 (398)
T ss_dssp             CCHHHHHHHH----HHHHHHTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSCCSHHH
T ss_pred             CChHHHHHHH----HHHHHhCCCc---------EEEECCHHHHHHHHHHHHhc-----------CCCEEEEeCCCchhHH
Confidence            3344444554    5888888763         37888889999988887632           4567888999999987


Q ss_pred             HHH----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 KVC----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                      ..+    ...|+   +++.++.+       |+++|+++|+++      +.+|+++.++|++|.+.|+++|+++|+++|++
T Consensus       119 ~~~~~~~~~~g~---~~~~~~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~  182 (398)
T 1gc0_A          119 AFLHHGIGEFGV---KLRHVDMA-------DLQALEAAMTPA------TRVIYFESPANPNMHMADIAGVAKIARKHGAT  182 (398)
T ss_dssp             HHHHHTGGGGTC---EEEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHGGGTCE
T ss_pred             HHHHHHHHHcCC---EEEEECCC-------CHHHHHHhcCCC------CeEEEEECCCCCCcccccHHHHHHHHHHcCCE
Confidence            776    55677   88888753       889999988653      45888899999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      +|+|++|+.+....+.    ..   .+|.++.+.||+++.|.+  +|+++.+++. +.+.+.....++.           
T Consensus       183 li~D~~~~~~~~~~~~----~~---~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~-~~~~~~~~~~~~~-----------  243 (398)
T 1gc0_A          183 VVVDNTYCTPYLQRPL----EL---GADLVVHSATKYLSGHGDITAGIVVGSQAL-VDRIRLQGLKDMT-----------  243 (398)
T ss_dssp             EEEECTTTHHHHCCGG----GG---TCSEEEEETTTTTTCSSSCCCEEEEECHHH-HHHHHHTHHHHHT-----------
T ss_pred             EEEECCCcccccCCch----hh---CceEEEECCccccCCCCCCeEEEEEEChHH-HHHHHHHHhhccC-----------
Confidence            9999999876543221    11   389999999999998876  6888776542 2212211111100           


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE--------------cC---CCceE
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV--------------VP---RHFAL  419 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~--------------~~---~~~~~  419 (499)
                              +.....+..|+.++.+  +.+..+.++..++++++.+.|+++|.++-+              .+   ...++
T Consensus       244 --------~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~  313 (398)
T 1gc0_A          244 --------GAVLSPHDAALLMRGI--KTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGM  313 (398)
T ss_dssp             --------CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTE
T ss_pred             --------CCCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceE
Confidence                    1111345566666554  556777888888899999999887665421              11   24677


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEE---e---------ee------------ECC--EEEEEEeccCCC
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLT---H---------TI------------VGG--LYMLRFAVGASL  473 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~---------~~------------~~g--~~~lRi~~~~~~  473 (499)
                      ++|.+.+.        .   ....+.+.+.+.....   +         ..            ..|  ..++|+++. ..
T Consensus       314 ~~~~l~~~--------~---~~~~~~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g-~~  381 (398)
T 1gc0_A          314 IAFELKGG--------I---GAGRRFMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVG-LE  381 (398)
T ss_dssp             EEEEETTH--------H---HHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECC-SS
T ss_pred             EEEEECCC--------H---HHHHHHHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeC-cC
Confidence            88877531        1   2223333334433222   1         00            011  368999996 78


Q ss_pred             CcHHHHHHHHHHHHHH
Q 010842          474 TDERHVVAAWELIMEG  489 (499)
Q Consensus       474 ~t~~di~~l~~~l~~~  489 (499)
                      +++++|+.+.++|+++
T Consensus       382 ~~~~~i~~l~~al~~~  397 (398)
T 1gc0_A          382 DIDDLLADVQQALKAS  397 (398)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhc
Confidence            8999999999998865

>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*

Probab=99.89  E-value=4.4e-21  Score=192.00  Aligned_cols=312  Identities=11%  Similarity=0.012  Sum_probs=205.4

Q ss_pred             HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842          105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE  184 (499)
Q Consensus       105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~  184 (499)
                      .+.+.+...+.. ...|. .+...+++++    +++++|.+.+       ..++|+|||+|+..++.+.  .        
T Consensus        41 ~v~~a~~~~~~~-~~~y~-~~~~~~l~~~----la~~~~~~~~-------~v~~~~g~~~al~~~~~~~--~--------   97 (364)
T 1lc5_A           41 SVKRALIDNLDC-IERYP-DADYFHLHQA----LARHHQVPAS-------WILAGNGETESIFTVASGL--K--------   97 (364)
T ss_dssp             HHHHHHHHTGGG-GGSCC-CTTCHHHHHH----HHHHHTSCGG-------GEEEESSHHHHHHHHHHHH--C--------
T ss_pred             HHHHHHHHHHHH-hhcCC-CCCHHHHHHH----HHHHHCcCHH-------HEEECCCHHHHHHHHHHHc--C--------
Confidence            345555555532 22342 2345566665    6777787644       3589999999998887766  1        


Q ss_pred             ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842          185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN  264 (499)
Q Consensus       185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~  264 (499)
                        + ..|++...+|.++..+++..|.   +++.+|.+.++++.+ ++++.+.+.+      .+.+|+++.++|++|.+-|
T Consensus        98 --g-d~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~-l~~~~~~~~~------~~~~v~i~~p~nptG~~~~  164 (364)
T 1lc5_A           98 --P-RRAMIVTPGFAEYGRALAQSGC---EIRRWSLREADGWQL-TDAILEALTP------DLDCLFLCTPNNPTGLLPE  164 (364)
T ss_dssp             --C-SEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGGTTCC-CTTHHHHCCT------TCCEEEEESSCTTTCCCCC
T ss_pred             --C-CeEEEeCCCcHHHHHHHHHcCC---eEEEEeCCcccccch-hHHHHHhccC------CCCEEEEeCCCCCCCCCCC
Confidence              2 4577788899999999999999   999999875332443 3434333321      2346777899999999988


Q ss_pred             ---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC-
Q 010842          265 ---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-  339 (499)
Q Consensus       265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-  339 (499)
                         +++|+++|++||+++++|++|+.+........... +....+.++.+.||+++.| ..+|++++.+++.. +.+.. 
T Consensus       165 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~-~~l~~~  242 (364)
T 1lc5_A          165 RPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPAL-KDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAM-ARMRRQ  242 (364)
T ss_dssp             HHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGC-TTCTTEEEEEESTTTTTCTTTCCEEEECCCHHHH-HHHHHH
T ss_pred             HHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHh-ccCCCEEEEEECchhhcCCccceEEEEECCHHHH-HHHHHh
Confidence               89999999999999999999987643111111111 1123678889999999755 45788883344333 22211 


Q ss_pred             CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce
Q 010842          340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-LNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA  418 (499)
Q Consensus       340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~  418 (499)
                      ...|                       ....+..+++...+.. +.+++..++..++++++.+.|++.|++++. ++..+
T Consensus       243 ~~~~-----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~g~  298 (364)
T 1lc5_A          243 QMPW-----------------------SVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVY-PGRAN  298 (364)
T ss_dssp             SCTT-----------------------CSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEC-CCSSS
T ss_pred             CCCC-----------------------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCCCCEEC-CCCCe
Confidence            1000                       1134555555555532 457778888888999999999998899876 45556


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .+.+.+...           ..++.+.|.++|+.+..+..+.  +..++|++++    +.+|+++++++|+++.+++
T Consensus       299 ~~~~~~~~~-----------~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~~~~~  360 (364)
T 1lc5_A          299 YLLLRCERE-----------DIDLQRRLLTQRILIRSCANYPGLDSRYYRVAIR----SAAQNERLLAALRNVLTGI  360 (364)
T ss_dssp             EEEEEESCT-----------TCCHHHHHHTTTEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHC---
T ss_pred             EEEEECCCc-----------HHHHHHHHHHCCcEEeeCcccCCCCCCEEEEEeC----CHHHHHHHHHHHHHHhhcc
Confidence            677766431           2346777777885544433332  2468999984    5889999999999887654

>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*

Probab=99.88  E-value=3.7e-21  Score=195.35  Aligned_cols=282  Identities=15%  Similarity=0.176  Sum_probs=196.0

Q ss_pred             HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH----HHHHh
Q 010842          133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK----VCKLA  208 (499)
Q Consensus       133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k----a~~~~  208 (499)
                      ++.+.+++++|.+.         .++++||++|+..++.+..+           ++..|+++...|.++..    .++..
T Consensus        66 ~l~~~ia~~~g~~~---------~i~~~~g~~ai~~~~~~l~~-----------~gd~Vl~~~~~y~~~~~~~~~~~~~~  125 (404)
T 1e5e_A           66 NLEGKIAFLEKTEA---------CVATSSGMGAIAATVLTILK-----------AGDHLISDECLYGCTHALFEHALTKF  125 (404)
T ss_dssp             HHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEESCCCHHHHHHHHTHHHHT
T ss_pred             HHHHHHHHHhCCCc---------EEEeCChHHHHHHHHHHHhC-----------CCCEEEEeCCCchhHHHHHHHHHHHc
Confidence            34445888888763         38888999998888776532           46678889999999888    78888


Q ss_pred             CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH-hCCEEEeeccccc
Q 010842          209 GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE-YGIWVHVDAAYAG  287 (499)
Q Consensus       209 G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~-~~~~lhvD~A~g~  287 (499)
                      |+   +++.+|.+       |+++|+++|+++      +.+|+++.++|++|.+.|+++|+++|++ +|+++++|++|+.
T Consensus       126 g~---~~~~v~~~-------d~~~l~~~i~~~------t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~  189 (404)
T 1e5e_A          126 GI---QVDFINTA-------IPGEVKKHMKPN------TKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCS  189 (404)
T ss_dssp             TC---EEEEECTT-------STTHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTC
T ss_pred             CC---EEEEECCC-------CHHHHHHhcCCC------CcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCch
Confidence            99   99998864       678898888653      3478899999999999999999999999 9999999999987


Q ss_pred             hhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCC
Q 010842          288 SACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTG  365 (499)
Q Consensus       288 ~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s  365 (499)
                      +....+.    ..   ++|.++.++||+++.|.+  +|+++.+++. +.+.+.....++.                   +
T Consensus       190 ~~~~~~~----~~---~~di~~~S~sK~~~~~g~ri~G~~~~~~~~-~~~~l~~~~~~~~-------------------g  242 (404)
T 1e5e_A          190 PMITNPV----DF---GVDVVVHSATKYINGHTDVVAGLICGKADL-LQQIRMVGIKDIT-------------------G  242 (404)
T ss_dssp             TTTCCGG----GG---TCSEEEEETTTTTTCSSCCCCEEEEECHHH-HHHHHHTCCCCCC-------------------C
T ss_pred             hhhCCcc----cc---CCEEEEEcCccccCCCCCCeEEEEEECHHH-HHHHHHHHHHhCC-------------------C
Confidence            6543221    11   489999999999998876  6888887643 3212322111110                   0


Q ss_pred             CCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEcC------------C----CceEEEEEecCCC
Q 010842          366 RRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFE-IVVP------------R----HFALVCFRLNPYP  428 (499)
Q Consensus       366 r~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~------------~----~~~~v~f~~~~~~  428 (499)
                      .....+..|+++..+  +.+..++++..++++.+.+.+++.+.+. ++.+            +    ..++++|.+..  
T Consensus       243 ~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~--  318 (404)
T 1e5e_A          243 SVISPHDAWLITRGL--STLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKS--  318 (404)
T ss_dssp             CCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETT--
T ss_pred             CCCCHHHHHHHHHhH--hHHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCC--
Confidence            112345667776665  3456677777888888888888876553 2211            1    26778887643  


Q ss_pred             CCCcchhHHHHHHHHHHHHhcCCEEEEeeeE-------------------------CC--EEEEEEeccCCCCcHHHHHH
Q 010842          429 HSGSADTEMLNRKLLDWVNSTGRVYLTHTIV-------------------------GG--LYMLRFAVGASLTDERHVVA  481 (499)
Q Consensus       429 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-------------------------~g--~~~lRi~~~~~~~t~~di~~  481 (499)
                             .  ...+.+.+.+.|. +..+..+                         .|  ..++|++++.     +|+++
T Consensus       319 -------~--~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~-----e~~~~  383 (404)
T 1e5e_A          319 -------G--FEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGI-----EDADE  383 (404)
T ss_dssp             -------H--HHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCS-----SCHHH
T ss_pred             -------C--HHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCC-----CCHHH
Confidence                   1  1223344445565 3332211                         12  4689999962     78999


Q ss_pred             HHHHHHHHHHHHhcc
Q 010842          482 AWELIMEGADRLFKG  496 (499)
Q Consensus       482 l~~~l~~~~~~l~~~  496 (499)
                      +++.|+++.+.+++.
T Consensus       384 li~~l~~al~~~~~~  398 (404)
T 1e5e_A          384 LIADFKQGLDALLRS  398 (404)
T ss_dssp             HHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999998877653

>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0

Probab=99.88  E-value=4.3e-21  Score=192.78  Aligned_cols=317  Identities=11%  Similarity=0.014  Sum_probs=212.6

Q ss_pred             HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      |..+.+.+...+. ....|....+..++++++.+|+.+.+|.+...     ...++|+|||+|+..++.+...       
T Consensus        38 ~~~v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~-----~~i~~t~g~~~al~~~~~~~~~-------  104 (376)
T 3ezs_A           38 PKFIQDALKNHTH-SLNIYPKSAFEESLRAAQRGFFKRRFKIELKE-----NELISTLGSREVLFNFPSFVLF-------  104 (376)
T ss_dssp             CHHHHHHHHTTGG-GGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCG-----GGEEEESSSHHHHHHHHHHHTT-------
T ss_pred             CHHHHHHHHHhhh-hcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCH-----HHEEECcCcHHHHHHHHHHHcC-------
Confidence            3445555555442 23345544567899999999999999973111     1469999999999888877642       


Q ss_pred             hhccC--CeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842          183 AENMH--KLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT  260 (499)
Q Consensus       183 ~~g~~--~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G  260 (499)
                          +  +..|+++..+|.++...++..|.   +++.+|.++++  .+++ +|++++.++++      +|+++.++|++|
T Consensus       105 ----~~~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~--~~~~-~l~~~~~~~~~------~v~~~~p~nptG  168 (376)
T 3ezs_A          105 ----DYQNPTIAYPNPFYQIYEGAAKFIKA---KSLLMPLTKEN--DFTP-SLNEKELQEVD------LVILNSPNNPTG  168 (376)
T ss_dssp             ----TCSSCEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGG--TSCC-CCCHHHHHHCS------EEEECSSCTTTC
T ss_pred             ----CCCCCEEEEecCCcHhHHHHHHHcCC---EEEEcccCCCC--Ccch-hHHhhhccCCC------EEEEcCCCCCcC
Confidence                4  56788899999999999999999   99999998654  3444 77777776543      677789999999


Q ss_pred             ccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcC-------CCCCceeEeccccccc-CCCcceEEEEeC
Q 010842          261 AVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNG-------IERVDSFSFSPHKWLL-SYLDCCCLWVKQ  329 (499)
Q Consensus       261 ~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g-------~~~aDsi~~~~hK~l~-~p~~~g~l~~r~  329 (499)
                      .+-|   +++|+++|++||+++++|++|+.+.... ........       ....+.+..+.+|+++ ....+|+++.+.
T Consensus       169 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~  247 (376)
T 3ezs_A          169 RTLSLEELISWVKLALKHDFILINDECYSEIYENT-PPPSLLEACMLAGNEAFKNVLVIHSLSKRSSAPGLRSGFIAGDS  247 (376)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSS-CCCCHHHHHHHTTCTTCTTEEEEEESTTTTTCGGGCCEEEEECH
T ss_pred             CCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCC-CCCCHHHccccccccccCcEEEEecchhccCCccceeEEEeeCH
Confidence            9966   6777888999999999999998764422 11111110       1246788899999996 446678877643


Q ss_pred             chhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010842          330 PGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPR  408 (499)
Q Consensus       330 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~  408 (499)
                       +.. +.+.....+.                    +.....+..+++...+. .+.+++..++..++++++.+.|+   +
T Consensus       248 -~~~-~~~~~~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~---~  302 (376)
T 3ezs_A          248 -RLL-EKYKAFRAYL--------------------GYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIFK---N  302 (376)
T ss_dssp             -HHH-HHHHHHHTTT--------------------CCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHST---T
T ss_pred             -HHH-HHHHHHHhhh--------------------cCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhc---C
Confidence             322 2221110000                    00112333344333332 34577888888888999998887   4


Q ss_pred             eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeEC----CEEEEEEeccCCCCcHHHHHHHH
Q 010842          409 FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVG----GLYMLRFAVGASLTDERHVVAAW  483 (499)
Q Consensus       409 ~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~----g~~~lRi~~~~~~~t~~di~~l~  483 (499)
                      +.  .+.....+.+.+.  .          ..++.++|.+ .|+.+..+..+.    +..++|++++   .|+++|++++
T Consensus       303 ~~--~~~~~~~~~~~~~--~----------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~---~~~~~i~~~l  365 (376)
T 3ezs_A          303 TL--IYPYSFYVYLPVQ--N----------GENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALV---YDTPLLEKPL  365 (376)
T ss_dssp             CC--CCSBSSEEEEECS--C----------HHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECC---SCHHHHHHHH
T ss_pred             CC--CCCcceEEEEECC--C----------HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEc---CCHHHHHHHH
Confidence            54  2334445555554  1          3566777776 687655443332    4578999986   3899999999


Q ss_pred             HHHHHHHH
Q 010842          484 ELIMEGAD  491 (499)
Q Consensus       484 ~~l~~~~~  491 (499)
                      ++|.++.+
T Consensus       366 ~~l~~~l~  373 (376)
T 3ezs_A          366 EIIETYRE  373 (376)
T ss_dssp             HHHHHHHC
T ss_pred             HHHHHHHH
Confidence            99998764

>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*

Probab=99.88  E-value=9.5e-22  Score=196.64  Aligned_cols=306  Identities=13%  Similarity=0.014  Sum_probs=196.6

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCcc-EEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGG-GVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--  200 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~-g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--  200 (499)
                      +|...++.+++.+++++++|.+++.      . .++|+|||+|+..++.+..+           ++..|++....|++  
T Consensus        44 ~~~~~~~~~~~~~~la~~~g~~~~~------~~i~~t~g~t~a~~~~~~~l~~-----------~gd~vl~~~~~~~~~~  106 (362)
T 2c0r_A           44 GAVYEAVHNEAQARLLALLGNPTGY------KVLFIQGGASTQFAMIPMNFLK-----------EGQTANYVMTGSWASK  106 (362)
T ss_dssp             SHHHHHHHHHHHHHHHHHTTCCSSE------EEEEESSHHHHHHHHHHHHHCC-----------TTCEEEEEECSHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHhCCCCCc------EEEEECCCchHHHHHHHHhcCC-----------CCCeEEEEecCcHhHH
Confidence            5666777888999999999997521      2 35779999999888776532           44556655556666  


Q ss_pred             HHHHHHHhCCCCCCeEEeeCCC--CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-CChhHHHHHHHHhCC
Q 010842          201 FAKVCKLAGVSPANIRALPTSV--DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-DNVEPLAEVANEYGI  277 (499)
Q Consensus       201 ~~ka~~~~G~g~~~v~~v~~~~--~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-d~l~~I~~ia~~~~~  277 (499)
                      +...++..|    +++.||++.  +.+..+|.++++  +++      .+.+|++++++|+||.+ .|+++|      +|+
T Consensus       107 ~~~~~~~~g----~~~~v~~~~~~~~~~~~~~~~~~--i~~------~t~~v~~~~~~n~tG~~~~~l~~i------~~~  168 (362)
T 2c0r_A          107 ALKEAKLIG----DTHVAASSEASNYMTLPKLQEIQ--LQD------NAAYLHLTSNETIEGAQFKAFPDT------GSV  168 (362)
T ss_dssp             HHHHHHHHS----CEEEEEECGGGTTCSCCCGGGCC--CCT------TEEEEEEESEETTTTEECSSCCCC------TTS
T ss_pred             HHHHHHHhC----CeEEEecccccccccCCCHHHcc--cCC------CcCEEEEeCCcCccceeccccccc------CCC
Confidence            335555554    477788762  111235666553  322      35589999999999995 899987      899


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF  357 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  357 (499)
                      |+|+|++|+.+....        .+...|++++++|||++ |.|+|+++++++. . +.+....+++.+..    ...  
T Consensus       169 ~vivD~a~~~~~~~~--------~~~~~d~~~~s~~K~~g-~~G~G~l~~~~~~-~-~~l~~~~~~~~~~~----~~~--  231 (362)
T 2c0r_A          169 PLIGDMSSDILSRPF--------DLNQFGLVYAGAQKNLG-PSGVTVVIVREDL-V-AESPKHLPTMLRYD----TYV--  231 (362)
T ss_dssp             CEEEECTTTTTSSCC--------CGGGCSEEEEETTTTTC-CSSCEEEEEEGGG-S-SSCCTTSCGGGCHH----HHH--
T ss_pred             EEEEEChhhccCCcc--------chhHCcEEEEecccccc-CcCcEEEEEcHHH-H-hhccccCchHHhHH----HHh--
Confidence            999999997654321        12235999999999997 7789999997642 1 11111101111000    000  


Q ss_pred             CCcccCCCCC-CCcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCe-EEEcCC---CceEEEEEecCCCCCC
Q 010842          358 KDWQVGTGRR-FKSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGFVKSDPRF-EIVVPR---HFALVCFRLNPYPHSG  431 (499)
Q Consensus       358 ~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~-~~~~~~---~~~~v~f~~~~~~~~~  431 (499)
                      ......++.. .....+..+++.+... +++++.++..++++++.+.|++++++ ++..++   ...+++|.+..     
T Consensus       232 ~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  306 (362)
T 2c0r_A          232 KNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS-----  306 (362)
T ss_dssp             HTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC-----
T ss_pred             hccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEEEEcCC-----
Confidence            0000001111 1123445555554444 78999999999999999999998646 775432   34567776642     


Q ss_pred             cchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          432 SADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       432 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                          .....++.+.|.++|+++..+...  ..++|++++ ..++++|+++++++|+++.++.
T Consensus       307 ----~~~~~~~~~~L~~~gi~~~~g~~~--~~~iRis~~-~~~~~e~i~~l~~~l~~~~~~~  361 (362)
T 2c0r_A          307 ----EELEKEFVKASEQEGFVGLKGHRS--VGGLRASIY-NAVPYESCEALVQFMEHFKRSR  361 (362)
T ss_dssp             ----HHHHHHHHHHHHHTTEESCBCCTT--TCSEEEECC-TTSCHHHHHHHHHHHHHHHHHH
T ss_pred             ----cchHHHHHHHHHHCCCeeccCCCC--CCEEEEECC-CCCCHHHHHHHHHHHHHHHHhc
Confidence                123567788888888643322211  246999995 6788999999999999987653

>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*

Probab=99.88  E-value=3.4e-22  Score=198.59  Aligned_cols=304  Identities=15%  Similarity=0.139  Sum_probs=190.7

Q ss_pred             ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842          120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS  199 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~  199 (499)
                      .|...+...+++++    +++++|.+.         .++++|||+|+..++.+..+           ++..|+++..+|.
T Consensus        33 ~y~~~~~~~~l~~~----la~~~g~~~---------~~~~~~gt~a~~~~~~~~~~-----------~gd~Vl~~~~~~~   88 (347)
T 1jg8_A           33 VYGEDPTINELERL----AAETFGKEA---------ALFVPSGTMGNQVSIMAHTQ-----------RGDEVILEADSHI   88 (347)
T ss_dssp             GGTCCHHHHHHHHH----HHHHHTCSE---------EEEESCHHHHHHHHHHHHCC-----------TTCEEEEETTCHH
T ss_pred             ccCCChHHHHHHHH----HHHHhCCce---------EEEecCcHHHHHHHHHHhcC-----------CCCEEEEcCcchh
Confidence            45556666666655    888888754         38899999999887765422           5677888999998


Q ss_pred             hHHH---HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc-cccCC---hhHHHHHH
Q 010842          200 TFAK---VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST-TAVDN---VEPLAEVA  272 (499)
Q Consensus       200 s~~k---a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~-G~id~---l~~I~~ia  272 (499)
                      +...   .+...|+   +++.+ .++  ++.+|+++|+++|++....+.++.+|+.+.++|++ |.+-|   +++|+++|
T Consensus        89 ~~~~~~~~~~~~g~---~~~~v-~~~--~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a  162 (347)
T 1jg8_A           89 FWYEVGAMAVLSGV---MPHPV-PGK--NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIA  162 (347)
T ss_dssp             HHSSTTHHHHHTCC---EEEEE-CEE--TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHH
T ss_pred             hhccccchhhccCe---EEEEe-cCC--CCccCHHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHH
Confidence            7543   5677888   88888 443  35799999999885310001135578889999999 99855   57889999


Q ss_pred             HHhCCEEEeeccccchhc--cCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCC
Q 010842          273 NEYGIWVHVDAAYAGSAC--ICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSE  350 (499)
Q Consensus       273 ~~~~~~lhvD~A~g~~~~--~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~  350 (499)
                      ++||+++|+|+||.-+..  .......+.   ..+|++++++||+++.|.  |.+++.+++...+...... ++..    
T Consensus       163 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~l~~~~--G~~~~~~~~~~~~~~~~~~-~~~~----  232 (347)
T 1jg8_A          163 KEHGINVHIDGARIFNASIASGVPVKEYA---GYADSVMFCLSKGLCAPV--GSVVVGDRDFIERARKARK-MLGG----  232 (347)
T ss_dssp             HHHTCEEEEEETTHHHHHHHHCCCHHHHH---HTCSEEEEESSSTTCCSS--CEEEEECHHHHHHHHHHHH-HHTC----
T ss_pred             HHCCCEEEeehhhhhcchhhcCCChHHhc---ccccEEEEecccccCCCc--eEEEEcCHHHHHHHHHHHH-HcCC----
Confidence            999999999998742211  111111111   247889999999998774  4444444433322111100 1100    


Q ss_pred             CCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cCCCceEEEEEecCCCC
Q 010842          351 SNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VPRHFALVCFRLNPYPH  429 (499)
Q Consensus       351 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~v~f~~~~~~~  429 (499)
                                    +.+..++..+++...+  +...+.+++..++++++.+.|++. ++++. .++..+++++++.... 
T Consensus       233 --------------~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~-  294 (347)
T 1jg8_A          233 --------------GMRQAGVLAAAGIIAL--TKMVDRLKEDHENARFLALKLKEI-GYSVNPEDVKTNMVILRTDNLK-  294 (347)
T ss_dssp             --------------CCSSTHHHHHHHHHHH--HHSSTTHHHHHHHHHHHHHHHHHH-TCBCCGGGCCSSEEEEECTTSS-
T ss_pred             --------------chhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhc-CceeccCCCcceEEEEEccccc-
Confidence                          0011223223332222  111122344456778888888877 67643 3455677777764211 


Q ss_pred             CCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          430 SGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       430 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                         .    ...++.++|.++|+.+...    +..++|+++ +..++++|+++++++|+++.+++
T Consensus       295 ---~----~~~~~~~~l~~~gi~v~~~----~~~~iRl~~-~~~~~~e~i~~~~~~l~~~l~~~  346 (347)
T 1jg8_A          295 ---V----NAHGFIEALRNSGVLANAV----SDTEIRLVT-HKDVSRNDIEEALNIFEKLFRKF  346 (347)
T ss_dssp             ---S----CHHHHHHHHHHHTEECEEE----ETTEEEEEC-CTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             ---C----CHHHHHHHHHHCCCEEecC----CCCeEEEEe-CCCCCHHHHHHHHHHHHHHHHhc
Confidence               0    1356777777778544322    134699998 47789999999999999987653

>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0

Probab=99.88  E-value=2.1e-21  Score=197.82  Aligned_cols=311  Identities=13%  Similarity=0.045  Sum_probs=194.1

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF  201 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~  201 (499)
                      ...+....+|+.+.+++++++|.+.+.        +++++||+|+..++.+..+           ++..|+++..+|.++
T Consensus        64 ~~~~~~~~~~~~~~~~la~~~g~~~~~--------i~~~sGt~a~~~~~~~~~~-----------~gd~vl~~~~~~~~~  124 (417)
T 3n0l_A           64 GGCEFVDEIETLAIERCKKLFNCKFAN--------VQPNSGSQANQGVYAALIN-----------PGDKILGMDLSHGGH  124 (417)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHTCSEEE--------CCCSSHHHHHHHHHHHHSC-----------TTCEEEEECC-----
T ss_pred             ccchHHHHHHHHHHHHHHHHhCCCCcc--------eEeccHHHHHHHHHHHhcC-----------CCCEEEecccccccc
Confidence            344566789999999999999986542        5556669999988877632           567788898999876


Q ss_pred             HH---HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          202 AK---VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       202 ~k---a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                      ..   .+...|.+. .++.++++  .++.+|+++|++++++..     +.+|+.+.++  +|.+.|+++|.++|++||++
T Consensus       125 ~~~~~~~~~~g~~~-~~~~~~~~--~~~~~d~~~l~~~i~~~~-----~~~v~~~~~~--~G~~~~l~~i~~l~~~~~~~  194 (417)
T 3n0l_A          125 LTHGAKVSSSGKMY-ESCFYGVE--LDGRIDYEKVREIAKKEK-----PKLIVCGASA--YARVIDFAKFREIADEIGAY  194 (417)
T ss_dssp             -----------CCS-EEEEECCC--TTSSCCHHHHHHHHHHHC-----CSEEEECCSS--CCSCCCHHHHHHHHHHHTCE
T ss_pred             cchhhhhhhhccee-eeEeccCC--CCCCcCHHHHHHHHHhcC-----CeEEEECCcc--cCccCCHHHHHHHHHHcCCE
Confidence            55   344445411 34555555  346899999999997431     2366666655  39999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK  358 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  358 (499)
                      +|+|++|+.+.........   .+..+|++++++||++.+|. +|+++.+++...............             
T Consensus       195 li~Dea~~~g~~~~~~~~~---~~~~~di~~~s~sK~l~g~~-~G~~~~~~~~~~~~~~~~~~~~~~-------------  257 (417)
T 3n0l_A          195 LFADIAHIAGLVVAGEHPS---PFPYAHVVSSTTHKTLRGPR-GGIIMTNDEELAKKINSAIFPGIQ-------------  257 (417)
T ss_dssp             EEEECTTTHHHHHTTSSCC---CTTTCSEEEEESSTTTCSCS-CEEEEESCHHHHHHHHHHHTTTTC-------------
T ss_pred             EEEECccchhhhhcccCCC---ccccceEEEeeCccccCCCC-eeEEEECCHHHHHHHhhhhCCccc-------------
Confidence            9999997654433222111   12247999999999997776 488887754433221111000000             


Q ss_pred             CcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcchhH
Q 010842          359 DWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSADTE  436 (499)
Q Consensus       359 ~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~  436 (499)
                           ++... ....+..++.....++++++.++..++++++.+.|++ ++++++.. ...+.+.+.+.+.+        
T Consensus       258 -----~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~--------  323 (417)
T 3n0l_A          258 -----GGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMD-RKFKLVSDGTDNHLVLMSFLDRE--------  323 (417)
T ss_dssp             -----SSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGGSCSSSEEEEECTTSS--------
T ss_pred             -----CCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh-CCceeccCCCCceEEEEEcccCC--------
Confidence                 01000 1123344454444567889999999999999999998 58887652 34455666654321        


Q ss_pred             HHHHHHHHHHHhcCCEEEEeee------ECCEEEEEEecc---CCCCcHHHHHHHHHHHHHHHHH
Q 010842          437 MLNRKLLDWVNSTGRVYLTHTI------VGGLYMLRFAVG---ASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       437 ~~~~~l~~~l~~~g~~~~~~~~------~~g~~~lRi~~~---~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      .....+.+.|.+.|+.+.....      ......+|+++.   ....++++|++++++|.++.++
T Consensus       324 ~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~  388 (417)
T 3n0l_A          324 FSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDD  388 (417)
T ss_dssp             SCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence            0134556666677854322111      112245899863   1235689999999999988754

>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}

Probab=99.88  E-value=1.4e-21  Score=194.90  Aligned_cols=331  Identities=12%  Similarity=0.021  Sum_probs=206.5

Q ss_pred             CccccccCCCCCChHHHHHHHHHHHc-ccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH
Q 010842           89 SPNFFAFFPATVSTAGFLGEMLCACF-NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL  167 (499)
Q Consensus        89 ~p~~~~~~~~~~~~~~~~~~~l~~~~-n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~  167 (499)
                      +..|+|.-+. +..+..+.+++.... ......|...|...++|+.    +++++|.+..         ++++|||+|+.
T Consensus        11 ~~~~l~~~~~-p~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~----la~~~~~~~~---------i~~~~G~~a~~   76 (357)
T 3lws_A           11 QTTGQISGHG-KRNVGVLKTAFAAVADEMASDQYGTGAIIEPFEQK----FADVLGMDDA---------VFFPSGTMAQQ   76 (357)
T ss_dssp             TCSEESSBSS-CCBHHHHHHHHTTSCTTCBCEETTEETTHHHHHHH----HHHHHTCSEE---------EEESCHHHHHH
T ss_pred             hhcccccCCC-CCCHHHHHHHHHHhhcccCcccccCChHHHHHHHH----HHHHhCCCcE---------EEecCcHHHHH
Confidence            4456666544 345555555554321 1112344445666666655    8888887543         77799999999


Q ss_pred             HHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH---HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842          168 VTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK---VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG  244 (499)
Q Consensus       168 ~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k---a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g  244 (499)
                      .++.+.....         ++.+|+++...|++...   .+...|.   +++.+|.+   ++.+|+++|+++.+      
T Consensus        77 ~al~~~~~~g---------d~~~vi~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~---~~~~d~~~l~~~~~------  135 (357)
T 3lws_A           77 VALRIWSDET---------DNRTVAYHPLCHLEIHEQDGLKELHPI---ETILVGAA---DRLMTLDEIKALPD------  135 (357)
T ss_dssp             HHHHHHHHHH---------TCCEEEECTTCHHHHSSTTHHHHHSSC---EEEECSCT---TSCCCHHHHHTCCS------
T ss_pred             HHHHHHhhcC---------CCcEEEecccceeeeeccchhhhccCc---EEEEecCC---CCCcCHHHHhcCcC------
Confidence            8888765431         22267788888887655   3456677   88888743   35899999998721      


Q ss_pred             CccEEEEEecCCCcc-cccCC---hhHHHHHHHHhCCEEEeeccccchhc--cCccchhhhcCCCCCceeEecccccccC
Q 010842          245 LVPLFLCATVGTTST-TAVDN---VEPLAEVANEYGIWVHVDAAYAGSAC--ICPEFRHYLNGIERVDSFSFSPHKWLLS  318 (499)
Q Consensus       245 ~~p~~vv~t~gtt~~-G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~--~~~~~~~~~~g~~~aDsi~~~~hK~l~~  318 (499)
                        +.+|+++.++|++ |.+.+   +++|+++|++||+|+|+|+||+....  .........   ..+|+++.++||+++.
T Consensus       136 --~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~  210 (357)
T 3lws_A          136 --IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIA---GLFDSIYISFYKGLGG  210 (357)
T ss_dssp             --CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHH---TTSSEEEEESSSTTCC
T ss_pred             --cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHH---hcCCEEEEeccccCCC
Confidence              2368888888888 88764   89999999999999999999862211  111111222   3478999999999977


Q ss_pred             CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 010842          319 YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKM  398 (499)
Q Consensus       319 p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~  398 (499)
                      |.+ |+++. +++.......... .+...                  .+.......+++..+  +...+.+++..+++++
T Consensus       211 ~~g-g~~~~-~~~~~~~~~~~~~-~~~~~------------------~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~  267 (357)
T 3lws_A          211 IAG-AILAG-PAAFCQTARIWKR-RYGGD------------------LISLYPYIVSADYYY--ELRKDRMGQYYEQAKQ  267 (357)
T ss_dssp             SSC-EEEEE-CHHHHHHHHHHHH-HTTCC------------------CSCCHHHHHHHHHHH--HHHTTCHHHHHHHHHH
T ss_pred             Cce-EEEEc-CHHHHHHHHHHHH-HhcCC------------------cccchHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence            877 66655 4433322111110 00000                  000111111122222  2233445556788899


Q ss_pred             HHHHHhcCCCeEEE-cCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE-CCEEEEEEeccCC--CC
Q 010842          399 FEGFVKSDPRFEIV-VPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV-GGLYMLRFAVGAS--LT  474 (499)
Q Consensus       399 l~~~L~~~~~~~~~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~g~~~lRi~~~~~--~~  474 (499)
                      +.+.|+++|++++. .++..+.+++++....       .....++.+.|.++|+.+..+... .+..++|+++...  ..
T Consensus       268 l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~~  340 (357)
T 3lws_A          268 LAEQFNALPGVHTTPEVPVSNMFHLHFDGQA-------ADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGEL  340 (357)
T ss_dssp             HHHHHHTSTTEEEESSSCSSSEEEEEEESCH-------HHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGGS
T ss_pred             HHHHHHhCCCCeeccCCCcceEEEEEecCCh-------HHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhhc
Confidence            99999999999985 4667788888775421       122456777888888544332222 4667899988533  35


Q ss_pred             cHHHHHHHHHHHHHH
Q 010842          475 DERHVVAAWELIMEG  489 (499)
Q Consensus       475 t~~di~~l~~~l~~~  489 (499)
                      +++++++.++.|.+.
T Consensus       341 ~~~~l~~al~~l~~a  355 (357)
T 3lws_A          341 DQQTRDAGFARLRQA  355 (357)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHh
Confidence            788899888888765

>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*

Probab=99.88  E-value=2.5e-21  Score=195.84  Aligned_cols=285  Identities=15%  Similarity=0.096  Sum_probs=197.9

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|...++|+.    +++++|.+.         .++++|||+|+..++.+...           ++..|+++...|.+..
T Consensus        64 ~~~~~~~l~~~----la~~~g~~~---------~~~~~sGt~A~~~al~~~~~-----------~gd~Vi~~~~~y~~~~  119 (392)
T 3qhx_A           64 GNPTRTALEAA----LAAVEDAAF---------GRAFSSGMAAADCALRAMLR-----------PGDHVVIPDDAYGGTF  119 (392)
T ss_dssp             CCHHHHHHHHH----HHHHTTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHH
T ss_pred             CChHHHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCcchHH
Confidence            34554555554    889998764         38999999999988876632           4567888999998877


Q ss_pred             HHH----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 KVC----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                      ..+    ...|+   +++.+|.+       |+++|+++|+++      +.+|++..++|++|.+.|+++|+++|++||++
T Consensus       120 ~~~~~~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~  183 (392)
T 3qhx_A          120 RLIDKVFTGWNV---EYTPVALA-------DLDAVRAAIRPT------TRLIWVETPTNPLLSIADIAGIAQLGADSSAK  183 (392)
T ss_dssp             HHHHHTGGGGTC---EEEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCE
T ss_pred             HHHHHHHHhcCc---EEEEeCCC-------CHHHHHHhhCCC------CeEEEEECCCCCCcEEecHHHHHHHHHHcCCE
Confidence            666    55688   88888764       899999998754      34788899999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      +|+|++|+.+....+.    ..   .+|.++.+.||+++.+.+  +|+++.+++.... .+....               
T Consensus       184 li~D~~~~~~~~~~~~----~~---~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~-~l~~~~---------------  240 (392)
T 3qhx_A          184 VLVDNTFASPALQQPL----SL---GADVVLHSTTKYIGGHSDVVGGALVTNDEELDQ-SFAFLQ---------------  240 (392)
T ss_dssp             EEEECTTTCTTTCCGG----GG---TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHH-HHHHHH---------------
T ss_pred             EEEECCCcccccCChH----Hh---CCcEEEEcCccccCCCCCceEEEEEECcHHHHH-HHHHHH---------------
Confidence            9999999865332221    11   389999999999997743  7888877654332 211100               


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC-----------------ceE
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH-----------------FAL  419 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-----------------~~~  419 (499)
                           ...+.....+..|+.++.+  +.+..++++..++++++.+.|++.|.+..+..|.                 ..+
T Consensus       241 -----~~~g~~~~~~~~~~~~~~l--~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~  313 (392)
T 3qhx_A          241 -----NGAGAVPGPFDAYLTMRGL--KTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGM  313 (392)
T ss_dssp             -----HHHCCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSE
T ss_pred             -----HhcCCCCCHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceE
Confidence                 0112233456777777654  5577788889999999999999999886543221                 457


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE---------EEeeeE-----------CCEEEEEEeccCCCCcHHHH
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY---------LTHTIV-----------GGLYMLRFAVGASLTDERHV  479 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---------~~~~~~-----------~g~~~lRi~~~~~~~t~~di  479 (499)
                      ++|.+.+.        ....+++.+.+...|...         ..+...           -....+|+|++ ..+++++|
T Consensus       314 ~~~~l~~~--------~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg-~e~~~~~i  384 (392)
T 3qhx_A          314 VSVRMRAG--------RTAAEQLCAKTNIFILAESLGSVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVG-IEDVADLL  384 (392)
T ss_dssp             EEEEETTC--------HHHHHHHHHHCSSSEECSCCCCSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECC-SSCHHHHH
T ss_pred             EEEEeCCc--------HHHHHHHHHhCCCceECCCCCCCCceeeCcccccccccCHHHcCCCCCeEEEEec-cCCHHHHH
Confidence            88888652        233556666665443211         111100           12356999996 66777777


Q ss_pred             HHHHHHH
Q 010842          480 VAAWELI  486 (499)
Q Consensus       480 ~~l~~~l  486 (499)
                      +.+.++|
T Consensus       385 ~~l~~al  391 (392)
T 3qhx_A          385 DDLKQAL  391 (392)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            7777665

>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*

Probab=99.88  E-value=2e-22  Score=201.14  Aligned_cols=333  Identities=13%  Similarity=0.006  Sum_probs=209.5

Q ss_pred             CCCChHHHHHHHHHHHccc----CCccccc---ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCCh-HHHHHHH
Q 010842           98 ATVSTAGFLGEMLCACFNS----VGFNWLA---SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTT-SDSILVT  169 (499)
Q Consensus        98 ~~~~~~~~~~~~l~~~~n~----~~~~~~~---~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~gg-t~A~~~a  169 (499)
                      ++..+|..+.+.+...+..    ....|..   ++....+..++.+++++++|.+..      ...++|+|+ |+|+..+
T Consensus        10 g~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~------~~v~~~~g~gt~al~~~   83 (360)
T 1w23_A           10 GPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPND------YQILFLQGGASLQFTML   83 (360)
T ss_dssp             SSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTT------EEEEEESSHHHHHHHHH
T ss_pred             CCcCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC------ceEEEECCcchHHHHHH
Confidence            3334444555555555532    1222333   667777888899999999999632      135888888 8998877


Q ss_pred             HHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHH-HHHHHHHcCCccE
Q 010842          170 LIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRR-AVEADVEAGLVPL  248 (499)
Q Consensus       170 l~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~-~i~~~~~~g~~p~  248 (499)
                      +.+....        |.++.+|+++..+|++... ++.  .|  +++.||++++. +.+|+++|++ +++++      +.
T Consensus        84 ~~~l~~~--------~~~g~~vi~~~~~~~~~~~-~~~--~g--~~~~v~~~~~~-~~~d~~~l~~~~i~~~------~k  143 (360)
T 1w23_A           84 PMNLLTK--------GTIGNYVLTGSWSEKALKE-AKL--LG--ETHIAASTKAN-SYQSIPDFSEFQLNEN------DA  143 (360)
T ss_dssp             HHHHCCT--------TCEEEEEECSHHHHHHHHH-HHT--TS--EEEEEEECGGG-TSCSCCCGGGCCCCTT------EE
T ss_pred             HHHhcCC--------CCcccEEEecchhHHHHHH-HHH--hC--CeEEeeccccc-CcCCccchHhhccCCC------CC
Confidence            7655321        1135578888778877433 333  34  58889987521 3589999988 77432      45


Q ss_pred             EEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEe
Q 010842          249 FLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVK  328 (499)
Q Consensus       249 ~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r  328 (499)
                      +|++++++|+||.+-|  +   |+++||+++++|++|+.+....+        +...|++++++||+++ |.|+|+++++
T Consensus       144 ~v~~~~~~nptG~~~~--~---i~~~~~~~li~D~a~~~~~~~~~--------~~~~di~~~s~sK~~~-~~G~G~~~~~  209 (360)
T 1w23_A          144 YLHITSNNTIYGTQYQ--N---FPEINHAPLIADMSSDILSRPLK--------VNQFGMIYAGAQKNLG-PSGVTVVIVK  209 (360)
T ss_dssp             EEEEESEETTTTEECS--S---CCCCCSSCEEEECTTTTTSSCCC--------GGGCSEEEEETTTTTS-CTTCEEEEEE
T ss_pred             EEEEeCCCCCcceecc--c---ccccCCceEEEechhhcCCCCcC--------cccCCEEEEEcccccC-CCCcEEEEEc
Confidence            7888999999999854  2   23389999999999987643211        1123899999999887 6689999987


Q ss_pred             CchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccC-CCCCC-CcHHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHh
Q 010842          329 QPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVG-TGRRF-KSLRLWMVLRSYGVL-NLQSHIRSDIRLAKMFEGFVK  404 (499)
Q Consensus       329 ~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~-~sr~~-~al~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~L~  404 (499)
                      ++. + +.+.. .+.++...        ........ .+... ....+..++..+... +++++.++..++++++.+.|+
T Consensus       210 ~~~-~-~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~  279 (360)
T 1w23_A          210 KDL-L-NTKVEQVPTMLQYA--------THIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTID  279 (360)
T ss_dssp             HHH-H-CSCCTTCCGGGCHH--------HHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHH-H-hhcccCCcchhhhh--------hhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence            542 1 21211 11111000        00000000 11111 112344455554444 788999999999999999999


Q ss_pred             cCCCe-EEEcCC--Cce-EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHH
Q 010842          405 SDPRF-EIVVPR--HFA-LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVV  480 (499)
Q Consensus       405 ~~~~~-~~~~~~--~~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~  480 (499)
                      +++++ ....++  ..+ +++|++.+         .....++.++|.++|+.+..+..  ...++|+++. ..+++++++
T Consensus       280 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~~~gi~~~~~~~--~~~~iRis~~-~~~~~~~i~  347 (360)
T 1w23_A          280 ESNGFYVGHAEKGSRSLMNVTFNLRN---------EELNQQFLAKAKEQGFVGLNGHR--SVGGCRASIY-NAVPIDACI  347 (360)
T ss_dssp             TTTTSSEESSCGGGBCSSEEEEECSS---------HHHHHHHHHHHHHTTEESCBCCT--TTCSEEEECC-TTSCHHHHH
T ss_pred             HccCcccccCCchhccCcEEEEEcCC---------CccHHHHHHHHHHCCeeeecCCC--CCCeEEEEec-CCCCHHHHH
Confidence            98765 554222  234 67777643         12245677778888854422211  1357999995 778999999


Q ss_pred             HHHHHHHHHHHH
Q 010842          481 AAWELIMEGADR  492 (499)
Q Consensus       481 ~l~~~l~~~~~~  492 (499)
                      +++++|+++.++
T Consensus       348 ~~~~~l~~~~~~  359 (360)
T 1w23_A          348 ALRELMIQFKEN  359 (360)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhh
Confidence            999999987653

>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2

Probab=99.88  E-value=4.7e-21  Score=198.37  Aligned_cols=357  Identities=11%  Similarity=0.088  Sum_probs=204.3

Q ss_pred             cccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHH
Q 010842           91 NFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTL  170 (499)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al  170 (499)
                      .|+.+.++.+. +. +.+.+...+......|...+...+++++    +++++|.+.         .++|+|||+|+..++
T Consensus        44 ~ylD~~~~~~~-~~-v~~a~~~~~~~~~~~y~~~~~~~~l~~~----la~~~~~~~---------v~~t~ggt~A~~~al  108 (467)
T 1ax4_A           44 VYIDLLTDSGT-NA-MSDHQWAAMITGDEAYAGSRNYYDLKDK----AKELFNYDY---------IIPAHQGRGAENILF  108 (467)
T ss_dssp             CSEECSCSSSC-CC-EEHHHHHHHHTCCCCSSSCHHHHHHHHH----HHHHHCCCE---------EEEESSHHHHHHHHH
T ss_pred             eeeecccCcCC-HH-HHHHHHHHHhhcccccccCccHHHHHHH----HHHHcCCCc---------EEEcCCcHHHHHHHH
Confidence            46666544433 22 2233333333323356556666666655    777777642         599999999999999


Q ss_pred             HHHHHHHHhHhhhhccCCeEEEcCCCCc-hhHHHHHHHhCCCCCCeEEeeCCC----C----CCCccCHHHHHHHHHHHH
Q 010842          171 IAARDRALDAVGAENMHKLVVYGSDQTH-STFAKVCKLAGVSPANIRALPTSV----D----ANFSLSPQLLRRAVEADV  241 (499)
Q Consensus       171 ~~ar~~~~~~~~~~g~~~~~i~~s~~~H-~s~~ka~~~~G~g~~~v~~v~~~~----~----~~~~~d~~~L~~~i~~~~  241 (499)
                      .++++.....    |..+..|+++ ..| .++..++...|.   .++.++.+.    +    .++.+|+++|+++|++..
T Consensus       109 ~~~~~~~~~~----Gd~~~~viv~-~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~  180 (467)
T 1ax4_A          109 PVLLKYKQKE----GKAKNPVFIS-NFHFDTTAAHVELNGC---KAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHG  180 (467)
T ss_dssp             HHHHHHHHHT----TCCSSCEEEE-SSCCHHHHHHHHHTTC---EEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHC
T ss_pred             HHHHHhhccC----CCccceEEEe-ccccchhhHHHhccCC---ceecccccccccccccCCcccccCHHHHHHHHHhcC
Confidence            9887532110    1111115556 566 455677888888   777765431    0    124799999999998641


Q ss_pred             HcCCccEEEEEecCCCcc-ccc---CChhHHHHHHHHhCCEEEeeccccc-hhcc--------Cc-cchhhhcC-CCCCc
Q 010842          242 EAGLVPLFLCATVGTTST-TAV---DNVEPLAEVANEYGIWVHVDAAYAG-SACI--------CP-EFRHYLNG-IERVD  306 (499)
Q Consensus       242 ~~g~~p~~vv~t~gtt~~-G~i---d~l~~I~~ia~~~~~~lhvD~A~g~-~~~~--------~~-~~~~~~~g-~~~aD  306 (499)
                        ...+.+|+++.++|++ |.+   +++++|+++|++||+|+|+|++++. ...+        .+ ....+... ...+|
T Consensus       181 --~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  258 (467)
T 1ax4_A          181 --ADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYAD  258 (467)
T ss_dssp             --GGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCS
T ss_pred             --CCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccc
Confidence              0124578888889999 775   6688999999999999999998654 1110        00 00011000 02478


Q ss_pred             eeEecccccccCCCcceEEEEeCc-hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcH-HHHHHHHHhcHHH
Q 010842          307 SFSFSPHKWLLSYLDCCCLWVKQP-GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSL-RLWMVLRSYGVLN  384 (499)
Q Consensus       307 si~~~~hK~l~~p~~~g~l~~r~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al-~~~~~l~~~g~~g  384 (499)
                      ++++++||+++.|.| |+++.+++ +...........+ ....          .+   .+.....+ .+..++...- + 
T Consensus       259 ~~~~s~sK~~g~~~G-g~~~~~d~~~l~~~~~~~~~~~-~~~~----------~~---~~~~~~~~~a~~~~l~~~~-~-  321 (467)
T 1ax4_A          259 ALTMSAKKDPLLNIG-GLVAIRDNEEIFTLARQRCVPM-EGFV----------TY---GGLAGRDMAAMVQGLEEGT-E-  321 (467)
T ss_dssp             EEEEETTSTTCCSSC-EEEEESSCHHHHHHHHHHHHHH-TCST----------TT---TTCCHHHHHHHHHHHHHTT-C-
T ss_pred             eEEEeccccCCCCcc-eEEEeCCHHHHHHHHHhhcccc-cccc----------cc---CCccchHHHHHHHHHHHhh-h-
Confidence            999999999987744 66666645 4332211111111 0000          00   01110111 1111232221 1 


Q ss_pred             HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCC-CCcchhHHHHHHHHHHH-HhcCCEEEEeeeE---
Q 010842          385 LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPH-SGSADTEMLNRKLLDWV-NSTGRVYLTHTIV---  459 (499)
Q Consensus       385 ~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~-~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~---  459 (499)
                       ++.+++..++++++.+.|++ ++++++.+.....+.+....... ....  .....++.++| .+.|..+...+.+   
T Consensus       322 -~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~L~~~~gv~v~~~g~~~~~  397 (467)
T 1ax4_A          322 -EEYLHYRIGQVKYLGDRLRE-AGIPIQYPTGGHAVFVDCKKLVPQIPGD--QFPAQAVINALYLESGVRAVEIGSFLLG  397 (467)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHH-TTCCBCSSCCSSEEEEESTTTCTTSCGG--GCHHHHHHHHHHHHHCEECEEESHHHHC
T ss_pred             -hhHHHHHHHHHHHHHHHHHh-CCCCcccCCCceEEEEehhhhccccccC--CCCHHHHHHHHHHhcCceeeecCccccc
Confidence             23455556778889999987 57776655555556555211000 0000  11145677777 6778654431211   


Q ss_pred             -----C-----CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          460 -----G-----GLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       460 -----~-----g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                           +     ...++|+++....+|++||++++++|+++.+++
T Consensus       398 ~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~  441 (467)
T 1ax4_A          398 RDPATGEQKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKF  441 (467)
T ss_dssp             BCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred             cccccccccccccceEEEecccccCCHHHHHHHHHHHHHHHHhh
Confidence                 1     136899998534589999999999999988764

>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}

Probab=99.87  E-value=8.9e-21  Score=191.82  Aligned_cols=321  Identities=12%  Similarity=0.060  Sum_probs=211.8

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCC---CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLP---KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA  180 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~---~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~  180 (499)
                      ..+.+.+...+. ....|....+..++++++.+|+.+.+|.+   .+      ...++|+|||+|+..++.+...     
T Consensus        46 ~~v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~------~~i~~t~g~~~al~~~~~~~~~-----  113 (396)
T 3jtx_A           46 KVITDALTASLH-ELEKYPLTAGLPELRQACANWLKRRYDGLTVDAD------NEILPVLGSREALFSFVQTVLN-----  113 (396)
T ss_dssp             HHHHHHHHHTGG-GGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTT------TSEEEESSHHHHHHHHHHHHCC-----
T ss_pred             HHHHHHHHHHhh-hccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCC------CeEEEcCCcHHHHHHHHHHHhC-----
Confidence            344555555443 23345444557899999999999999964   22      0368999999999888877642     


Q ss_pred             hhhhccCC-----eEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecC
Q 010842          181 VGAENMHK-----LVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVG  255 (499)
Q Consensus       181 ~~~~g~~~-----~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~g  255 (499)
                            ++     ..|+++..+|.++..+++..|.   +++.+|++++ ++.+|+++|++++.++      +.+|+++.+
T Consensus       114 ------~g~~~~~d~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~-g~~~d~~~l~~~~~~~------~~~v~l~~p  177 (396)
T 3jtx_A          114 ------PVSDGIKPAIVSPNPFYQIYEGATLLGGG---EIHFANCPAP-SFNPDWRSISEEVWKR------TKLVFVCSP  177 (396)
T ss_dssp             ------C---CCCCEEEEEESCCHHHHHHHHHTTC---EEEEEECCTT-TCCCCGGGSCHHHHHT------EEEEEEESS
T ss_pred             ------CCCccCCCEEEEcCCCcHhHHHHHHHcCC---EEEEeecCCC-CCccCHHHHHHhhccC------cEEEEEECC
Confidence                  22     5788899999999999999999   9999999654 4789999999999764      347777899


Q ss_pred             CCcccccCChhH---HHHHHHHhCCEEEeeccccchhccCccchhhhc-----C-CCCCceeEecccccccCC-CcceEE
Q 010842          256 TTSTTAVDNVEP---LAEVANEYGIWVHVDAAYAGSACICPEFRHYLN-----G-IERVDSFSFSPHKWLLSY-LDCCCL  325 (499)
Q Consensus       256 tt~~G~id~l~~---I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~-----g-~~~aDsi~~~~hK~l~~p-~~~g~l  325 (499)
                      +|+||.+-|.++   |+++|++||+++++|++|+.+............     + -...+.++.+.+|.++.| ..+|++
T Consensus       178 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~  257 (396)
T 3jtx_A          178 NNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPGLRSGFV  257 (396)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGGGCCEEE
T ss_pred             CCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccccccCCcccceEEE
Confidence            999999966555   999999999999999999875432211111110     0 123678888999975544 567887


Q ss_pred             EEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHh
Q 010842          326 WVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVK  404 (499)
Q Consensus       326 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~  404 (499)
                      +.. +... +.+.....+..                    .....+...++...+. .+.+++..++..++.+++.+.|+
T Consensus       258 ~~~-~~~~-~~~~~~~~~~~--------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~  315 (396)
T 3jtx_A          258 AGD-AELL-KNFLLYRTYHG--------------------SAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQ  315 (396)
T ss_dssp             EEC-HHHH-HHHHHHHHHHT--------------------CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EeC-HHHH-HHHHHHHhhcc--------------------cCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            654 3322 22211100000                    0112233333333332 35677888888889999999998


Q ss_pred             cCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeE--------CCEEEEEEeccCCCCc
Q 010842          405 SDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIV--------GGLYMLRFAVGASLTD  475 (499)
Q Consensus       405 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~--------~g~~~lRi~~~~~~~t  475 (499)
                      +.  +.+..+.....+++.+....          ..++.++|.+ .|+.+..+..+        .+..++|++++ .  +
T Consensus       316 ~~--~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~~-~--~  380 (396)
T 3jtx_A          316 QV--FDVKLPDASFYIWLKVPDGD----------DLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIALV-A--D  380 (396)
T ss_dssp             TT--SCCCCCSSSSEEEEECTTSC----------HHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEECC-S--C
T ss_pred             hc--CCccCCCeeEEEEEECCCCC----------HHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEEc-C--C
Confidence            75  33333333345555654321          3456666644 47554443322        23478999986 2  8


Q ss_pred             HHHHHHHHHHHHHH
Q 010842          476 ERHVVAAWELIMEG  489 (499)
Q Consensus       476 ~~di~~l~~~l~~~  489 (499)
                      +++|++++++|.++
T Consensus       381 ~~~i~~~l~~l~~~  394 (396)
T 3jtx_A          381 VATCVKAAEDIVSL  394 (396)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999999875

>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*

Probab=99.87  E-value=1.4e-21  Score=198.66  Aligned_cols=336  Identities=10%  Similarity=0.020  Sum_probs=217.5

Q ss_pred             HHHHHHHHHHHcccC-CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          103 AGFLGEMLCACFNSV-GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      +..+.+.+...+... ...|....+..++++++.+|+.+.+|.+...    ....++|+|||+|+..++.+..+      
T Consensus        38 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~----~~~i~~~~g~~~a~~~~~~~~~~------  107 (410)
T 3e2y_A           38 PSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDP----NEEILVAVGAYGSLFNSIQGLVD------  107 (410)
T ss_dssp             CHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCT----TTSEEEESHHHHHHHHHHHHHCC------
T ss_pred             CHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCcHHHHHHHHHHhcC------
Confidence            344555555555432 2345555557899999999999988874210    01469999999999988877632      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC---------CCCCccCHHHHHHHHHHHHHcCCccEEEEE
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV---------DANFSLSPQLLRRAVEADVEAGLVPLFLCA  252 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~---------~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~  252 (499)
                           ++..|+++..+|.++...+...|.   +++.+|++.         +.+|.+|+++|+++++++      +.+|++
T Consensus       108 -----~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~------~~~v~~  173 (410)
T 3e2y_A          108 -----PGDEVIIMVPFYDCYEPMVRMAGA---VPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSK------TKAIIL  173 (410)
T ss_dssp             -----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTT------EEEEEE
T ss_pred             -----CCCEEEEeCCCchhhHHHHHHcCC---EEEEEeccccccccccccccCCcCCHHHHHhhcCCC------ceEEEE
Confidence                 456788889999999999999999   999999862         124679999999988543      447888


Q ss_pred             ecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhh--cCCCCCceeEeccccccc-CCCcceEEE
Q 010842          253 TVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL--NGIERVDSFSFSPHKWLL-SYLDCCCLW  326 (499)
Q Consensus       253 t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~l~-~p~~~g~l~  326 (499)
                      +.++|++|.+   +++++|+++|++||+++++|++|+.+...........  .+....+.+..+.+|.++ ....+|+++
T Consensus       174 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~  253 (410)
T 3e2y_A          174 NTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSI  253 (410)
T ss_dssp             ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSCGGGCCEEEE
T ss_pred             eCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCCCCceEEEEE
Confidence            8999999999   6899999999999999999999987543221111111  111123467778999997 446688887


Q ss_pred             EeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---------cHHHHHHHHHHHHHHHH
Q 010842          327 VKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---------GVLNLQSHIRSDIRLAK  397 (499)
Q Consensus       327 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---------g~~g~~~~~~~~~~~a~  397 (499)
                      .+++ .+ +.+.......                    +.....+...++...+         ..+.++++.++..++++
T Consensus       254 ~~~~-~~-~~~~~~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  311 (410)
T 3e2y_A          254 GPAH-LI-KHLQTVQQNS--------------------FYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRD  311 (410)
T ss_dssp             CCHH-HH-HHHHHHHHTT--------------------TCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHH
T ss_pred             ECHH-HH-HHHHHHHHhh--------------------ccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHH
Confidence            7553 22 2221100000                    0001223333333332         24567888888899999


Q ss_pred             HHHHHHhcCCCeEEEcCCCceEEEEEecCCCC-CCcch-hHHHHHHHHHHHH-hcCCEEEEeeeEC-------CEEEEEE
Q 010842          398 MFEGFVKSDPRFEIVVPRHFALVCFRLNPYPH-SGSAD-TEMLNRKLLDWVN-STGRVYLTHTIVG-------GLYMLRF  467 (499)
Q Consensus       398 ~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~-~~~~~-~~~~~~~l~~~l~-~~g~~~~~~~~~~-------g~~~lRi  467 (499)
                      ++.+.|+++ ++++..+.....+++.+..... .+... ......++.+++. +.|+.+..+..+.       +..++|+
T Consensus       312 ~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~~~~~~iRi  390 (410)
T 3e2y_A          312 RMVRLLNSV-GLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRF  390 (410)
T ss_dssp             HHHHHHHTT-TCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHHHHTTEEEE
T ss_pred             HHHHHHHHC-CCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCCCCCCEEEE
Confidence            999999988 8887755554555555543110 00000 0001224455443 4575544444342       2478999


Q ss_pred             eccCCCCcHHHHHHHHHHHHH
Q 010842          468 AVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       468 ~~~~~~~t~~di~~l~~~l~~  488 (499)
                      +++   .++++|++++++|++
T Consensus       391 s~~---~~~e~l~~~l~~l~~  408 (410)
T 3e2y_A          391 CFI---KKDSTLDAAEEIFRA  408 (410)
T ss_dssp             ECC---CCHHHHHHHHHHHHT
T ss_pred             EEc---CCHHHHHHHHHHHHh
Confidence            986   399999999999875

>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}

Probab=99.87  E-value=5.8e-21  Score=190.80  Aligned_cols=307  Identities=11%  Similarity=0.051  Sum_probs=204.5

Q ss_pred             HHHHHHHHHcccC---CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          105 FLGEMLCACFNSV---GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       105 ~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      .+.+.+...+...   ...|. .+...+++++    +++++|.+.+       ..++|+|||+|+..++.+..+      
T Consensus        43 ~v~~a~~~~~~~~~~~~~~y~-~~~~~~lr~~----la~~~g~~~~-------~i~~t~g~~~al~~~~~~l~~------  104 (360)
T 3hdo_A           43 EVVKAILEELGPDGAALRIYP-SASSQKLREV----AGELYGFDPS-------WIIMANGSDEVLNNLIRAFAA------  104 (360)
T ss_dssp             HHHHHHHHHHTTTCGGGGSCC-CSSCHHHHHH----HHHHHTCCGG-------GEEEESSHHHHHHHHHHHHCC------
T ss_pred             HHHHHHHHHHhcccchhhcCC-CCchHHHHHH----HHHHhCcCcc-------eEEEcCCHHHHHHHHHHHHhC------
Confidence            3445555555432   22332 2333445544    7788887554       469999999999888876532      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                           ++..|+++..+|.++...++..|.   +++.+|.+++  +.+  +++++.+        .+.+|+++.++|++|.
T Consensus       105 -----~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~--~~~--~~l~~~~--------~~~~v~i~~p~nptG~  164 (360)
T 3hdo_A          105 -----EGEEIGYVHPSYSYYGTLAEVQGA---RVRTFGLTGD--FRI--AGFPERY--------EGKVFFLTTPNAPLGP  164 (360)
T ss_dssp             -----TTCEEEEESSSCTHHHHHHHHHTC---EEEEECBCTT--SSB--TTCCSSB--------CSSEEEEESSCTTTCC
T ss_pred             -----CCCEEEEcCCChHHHHHHHHHCCC---EEEEeeCCCC--CCH--HHHHhhc--------CCCEEEEeCCCCCCCC
Confidence                 456788899999999999999999   9999998753  455  4443322        1237888899999999


Q ss_pred             cCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCC
Q 010842          262 VDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD  340 (499)
Q Consensus       262 id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~  340 (499)
                      +-|+++|.++|+++|+++++|++|+.+..  ......... ...+.++.+++|+++.| ..+|+++.+ ++.. +.+...
T Consensus       165 ~~~~~~l~~l~~~~~~~li~De~~~~~~~--~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~~~~-~~~~-~~~~~~  239 (360)
T 3hdo_A          165 SFPLEYIDELARRCAGMLVLDETYAEFAE--SNALELVRR-HENVVVTRTLSKSYSLAGMRIGLAIAR-PEVI-AALDKI  239 (360)
T ss_dssp             CCCHHHHHHHHHHBSSEEEEECTTGGGSS--CCCTHHHHH-CSSEEEEEESTTTTSCTTSCCEEEECC-HHHH-HHHHHH
T ss_pred             CcCHHHHHHHHHHCCCEEEEECChHhhCC--cchhHHhcc-CCCEEEEecchHhhcCCccceeeEeeC-HHHH-HHHHHh
Confidence            99999999999999999999999987421  111111111 12457788999998744 567888773 3322 222111


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceE
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFAL  419 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~  419 (499)
                      ...                +      ....+..+++...+. .+.+++..++..++++++.+.|++. ++++. ++..+.
T Consensus       240 ~~~----------------~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~  295 (360)
T 3hdo_A          240 RDH----------------Y------NLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSI-GYDVI-PSQGNY  295 (360)
T ss_dssp             SCS----------------C------CSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEC-CCSSSE
T ss_pred             CCC----------------C------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEc-CCCccE
Confidence            000                0      012344444443332 3567888889999999999999988 88875 556566


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      +.+.+....          ..++.+.|.++|+.+.......+..++|++++    +++|+++++++|+++.+.
T Consensus       296 ~~~~~~~~~----------~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~----~~~e~~~l~~al~~~~~~  354 (360)
T 3hdo_A          296 LFATPPDRD----------GKRVYDGLYARKVLVRHFSDPLLAHGMRISIG----TREEMEQTLAALKEIGEG  354 (360)
T ss_dssp             EEEECTTCC----------HHHHHHHHHHTTEECBCCCSTTTTTSEEEECC----CHHHHHHHHHHHHHHHC-
T ss_pred             EEEECCCCC----------HHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHhcc
Confidence            666654322          45677778888854332222233478999984    899999999999988653

>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}

Probab=99.87  E-value=8.3e-21  Score=194.42  Aligned_cols=314  Identities=10%  Similarity=0.051  Sum_probs=210.8

Q ss_pred             cccccChhhHHHHHHHHHHHHHHc-CCCCccccCCCcc---EEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcC
Q 010842          119 FNWLASPASTELEIVVMDWLATML-KLPKTFMFSGTGG---GVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGS  194 (499)
Q Consensus       119 ~~~~~~p~~~~lE~~~~~~la~l~-g~~~~~~~~~~~~---g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s  194 (499)
                      ..|....+..++++++.+|+.+.. +.+.+       .   .++|+|||+|+..++.+..+           ++..|+++
T Consensus        82 ~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~-------~~~~i~~t~g~~~al~~~~~~l~~-----------~gd~Vl~~  143 (430)
T 2x5f_A           82 FPYAPPQGIEELRDLWQQKMLRDNPELSID-------NMSRPIVTNALTHGLSLVGDLFVN-----------QDDTILLP  143 (430)
T ss_dssp             SSCCCTTCCHHHHHHHHHHHHHHCTTCCGG-------GBCCCEEESHHHHHHHHHHHHHCC-----------TTCEEEEE
T ss_pred             cccCCCCCCHHHHHHHHHHHhccCcccCCC-------ccceEEEcCCchHHHHHHHHHHhC-----------CCCEEEEc
Confidence            345544567889999888887663 33322       3   59999999999888877632           45678889


Q ss_pred             CCCchhHHHHHHH-hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHH
Q 010842          195 DQTHSTFAKVCKL-AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAE  270 (499)
Q Consensus       195 ~~~H~s~~ka~~~-~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~  270 (499)
                      ..+|..+...++. .|.   +++.+|+++++ +.+|+++|++++++.   +..+.+|+++.++|+||.+-|   +++|++
T Consensus       144 ~p~y~~~~~~~~~~~g~---~~~~~~~~~~~-~~~d~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~~~~~l~~i~~  216 (430)
T 2x5f_A          144 EHNWGNYKLVFNTRNGA---NLQTYPIFDKD-GHYTTDSLVEALQSY---NKDKVIMILNYPNNPTGYTPTHKEVTTIVE  216 (430)
T ss_dssp             SSCCTHHHHHHTTTTCC---EEEEECCBCTT-SCBCSHHHHHHHHHC---CSSEEEEEECSSCTTTCCCCCHHHHHHHHH
T ss_pred             CCcCccHHHHHHHhcCC---eEEEEeccCcc-CCcCHHHHHHHHHhc---CCCCEEEEEcCCCCCCCCcCCHHHHHHHHH
Confidence            9999999999998 999   99999987643 689999999999752   223457788999999999988   899999


Q ss_pred             HHHH-----hCCEEEeeccccchhccCccchh---hhcCCCCC---ceeEecccccccCC-CcceEEEE--eCchhHHHh
Q 010842          271 VANE-----YGIWVHVDAAYAGSACICPEFRH---YLNGIERV---DSFSFSPHKWLLSY-LDCCCLWV--KQPGLLVKA  336 (499)
Q Consensus       271 ia~~-----~~~~lhvD~A~g~~~~~~~~~~~---~~~g~~~a---Dsi~~~~hK~l~~p-~~~g~l~~--r~~~~l~~~  336 (499)
                      +|++     ||+++++|++|+.+.........   .+.+....   +.+..+.||+++.| ..+|++++  +++... +.
T Consensus       217 ~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~-~~  295 (430)
T 2x5f_A          217 AIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTK-EV  295 (430)
T ss_dssp             HHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHH-HH
T ss_pred             HHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHH-HH
Confidence            9999     99999999999876432211111   12222234   56688999999755 34799888  233322 22


Q ss_pred             hcCCccC-CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-----HHHHHHHHHHHHHHHHHHHHHHh----cC
Q 010842          337 LSTDPEY-LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-----VLNLQSHIRSDIRLAKMFEGFVK----SD  406 (499)
Q Consensus       337 ~~~~~~y-l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-----~~g~~~~~~~~~~~a~~l~~~L~----~~  406 (499)
                      +...... ...                 .+.....+..+++...+.     .+.+++..++..++++++.+.|+    +.
T Consensus       296 l~~~~~~~~~~-----------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~  358 (430)
T 2x5f_A          296 LEAKVKGLIRS-----------------NISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQYHS  358 (430)
T ss_dssp             HHHHHHHHHHT-----------------TTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGTT
T ss_pred             HHHHHhhhhhc-----------------ccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence            2110000 000                 000112344444444432     12233377778888899999998    44


Q ss_pred             CCeEEEcCCCce-EEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHH
Q 010842          407 PRFEIVVPRHFA-LVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWE  484 (499)
Q Consensus       407 ~~~~~~~~~~~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~  484 (499)
                       ++++.. +..+ .+++.+.+..          ..++.++|.+ .|+.+ .+.   +..++|++++ . +++++|+++++
T Consensus       359 -g~~~~~-~~~g~~~~~~~~~~~----------~~~~~~~l~~~~gi~v-~~g---~~~~iRis~~-~-~~~e~i~~~~~  420 (430)
T 2x5f_A          359 -HWQAYD-FNSGYFMAIKVHDVD----------PEALRKHLIDKYSIGV-IAL---NATDIRIAFS-C-VEKDDIPHVFD  420 (430)
T ss_dssp             -TEEECC-CCBSSEEEEEESSSC----------HHHHHHHHHHHHCEEC-EEC---SSSEEEEEGG-G-SCGGGHHHHHH
T ss_pred             -CceeeC-CCceEEEEeCCCCCC----------HHHHHHHHHHhCCEEE-ecC---CCCeEEEEEe-c-CCHHHHHHHHH
Confidence             787764 4433 4666665211          3567777776 78544 332   4467999996 3 58899999999


Q ss_pred             HHHHHHHHH
Q 010842          485 LIMEGADRL  493 (499)
Q Consensus       485 ~l~~~~~~l  493 (499)
                      +|+++.+++
T Consensus       421 ~l~~~l~~~  429 (430)
T 2x5f_A          421 SIAKAIDDL  429 (430)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999988764

>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}

Probab=99.87  E-value=3e-20  Score=183.67  Aligned_cols=300  Identities=11%  Similarity=0.063  Sum_probs=203.6

Q ss_pred             HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842          105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE  184 (499)
Q Consensus       105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~  184 (499)
                      .+.+.+...... ...| ..+...++++.    +++++|.+.+       ..++|+|+|+++..++.+.           
T Consensus        33 ~v~~a~~~~~~~-~~~y-~~~~~~~lr~~----la~~~~~~~~-------~i~~t~G~~~~l~~~~~~~-----------   88 (337)
T 3p1t_A           33 RVQAAIAAAAAR-INRY-PFDAEPRVMRK----LAEHFSCPED-------NLMLVRGIDECFDRISAEF-----------   88 (337)
T ss_dssp             HHHHHHHHHGGG-TTSC-CTTHHHHHHHH----HHHHHTSCGG-------GEEEESHHHHHHHHHHHHS-----------
T ss_pred             HHHHHHHHhhhh-hccC-CCCchHHHHHH----HHHHhCcCHH-------HEEEeCCHHHHHHHHHHhc-----------
Confidence            344555554432 2334 34555555555    7888888654       3588999998887776654           


Q ss_pred             ccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842          185 NMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN  264 (499)
Q Consensus       185 g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~  264 (499)
                        ++..|+++.++|.++...++..|+   +++.+|++++  +.+|+++|+++.        .+.+|+++.++|+||.+.|
T Consensus        89 --~gd~vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~~--------~~~~v~i~~p~nptG~~~~  153 (337)
T 3p1t_A           89 --SSMRFVTAWPGFDGYRARIAVSGL---RHFEIGLTDD--LLLDPNDLAQVS--------RDDCVVLANPSNPTGQALS  153 (337)
T ss_dssp             --TTSEEEEESSSCSHHHHHHTTSCC---EEEEECBCTT--SSBCHHHHTTCC--------TTEEEEEESSCTTTCCCCC
T ss_pred             --CCCeEEEeCCCcHHHHHHHHHcCC---EEEEecCCCC--CCCCHHHHHhhc--------CCCEEEEeCCCCCCCCCCC
Confidence              244688899999999999999999   9999998753  699999998751        2358899999999999999


Q ss_pred             hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccccccc-CCCcceEEEEeCchhHHHhhcCCccC
Q 010842          265 VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLLVKALSTDPEY  343 (499)
Q Consensus       265 l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l~~~~~~~~~y  343 (499)
                      +++|.++|+++++ +++|++|+.+....+    ........+.++.+.+|+++ .+..+|+++.++. .. +.+.....+
T Consensus       154 ~~~l~~l~~~~~~-~ivDea~~~~~~~~~----~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~-~~-~~l~~~~~~  226 (337)
T 3p1t_A          154 AGELDQLRQRAGK-LLIDETYVDYSSFRA----RGLAYGENELVFRSFSKSYGLAGLRLGALFGPSE-LI-AAMKRKQWF  226 (337)
T ss_dssp             HHHHHHHHHHCSE-EEEECTTGGGSSCSS----SCCCCBTTEEEEEESSSTTCCTTTCCEEEECCHH-HH-HHHHTTSCT
T ss_pred             HHHHHHHHHhCCc-EEEECCChhhccccc----cccccCCCEEEEeeCchhccCcchheEEEEeCHH-HH-HHHHhhcCC
Confidence            9999999999997 666999986432111    11122346788899999997 4466788876543 22 222211000


Q ss_pred             CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEE
Q 010842          344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCF  422 (499)
Q Consensus       344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f  422 (499)
                      .                      ....+...+....+. .+.+++.+++..++++++.+.|++. ++++. ++..+.+.+
T Consensus       227 ~----------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~  282 (337)
T 3p1t_A          227 C----------------------NVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL-GYRVA-SSEANFVLV  282 (337)
T ss_dssp             T----------------------CSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT-TCCBC-CCSSSEEEE
T ss_pred             C----------------------CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-cCEEC-CCCCeEEEE
Confidence            0                      012233333333432 2456777888888899999999987 77765 555566666


Q ss_pred             EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          423 RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      ....            ...+.+.|.++|+.+..+..+....++|++++    +++|+++++++|+++.
T Consensus       283 ~~~~------------~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~----~~~~~~~l~~al~~~~  334 (337)
T 3p1t_A          283 ENAA------------GERTLRFLRERGIQVKDAGQFGLHHHIRISIG----REEDNDRLLAALAEYS  334 (337)
T ss_dssp             ECTT------------THHHHHHHHHTTEECEEGGGGTCCSEEEEECC----CHHHHHHHHHHHHHHT
T ss_pred             EcCC------------HHHHHHHHHHCCeEEEECccCCCCCeEEEecC----CHHHHHHHHHHHHHHh
Confidence            5532            13455667777865544444444568999985    6899999999998864

>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*

Probab=99.87  E-value=3.5e-20  Score=191.27  Aligned_cols=320  Identities=13%  Similarity=0.043  Sum_probs=201.1

Q ss_pred             ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc-
Q 010842          120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH-  198 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H-  198 (499)
                      .|..++...+++++    +++++|.+.         .++|+|||+|+..++.++.+           ++.  +++..+| 
T Consensus        70 ~y~~~~~~~~l~~~----la~~~~~~~---------~~~~~~gt~a~~~al~~l~~-----------~gd--i~~~~~~~  123 (456)
T 2ez2_A           70 AYAGSENFYHLERT----VQELFGFKH---------IVPTHQGRGAENLLSQLAIK-----------PGQ--YVAGNMYF  123 (456)
T ss_dssp             CSSSCHHHHHHHHH----HHHHHCCSE---------EEEESSHHHHHHHHHHHHCC-----------TTC--EEEESSCC
T ss_pred             hcccChhHHHHHHH----HHHHhCCCc---------EEEeCCcHHHHHHHHHHhCC-----------CCC--Eecccccc
Confidence            46667777777777    777777653         49999999999998877632           333  4566777 


Q ss_pred             hhHHHHHHHhCCCCCCeEEeeCCCC----C----CCccCHHHHHHHHHHHHHcCCccEEEEEecCCC-cccccCC---hh
Q 010842          199 STFAKVCKLAGVSPANIRALPTSVD----A----NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT-STTAVDN---VE  266 (499)
Q Consensus       199 ~s~~ka~~~~G~g~~~v~~v~~~~~----~----~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt-~~G~id~---l~  266 (499)
                      .++..++...|.   .++.++++++    .    ++.+|+++|+++|+++++  ..+.+|+++.++| ++|.+-|   ++
T Consensus       124 ~~~~~~~~~~G~---~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~--~~~~~v~l~~p~n~ptG~~~~~~~l~  198 (456)
T 2ez2_A          124 TTTRYHQEKNGA---VFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGA--ENIAYICLAVTVNLAGGQPVSMANMR  198 (456)
T ss_dssp             HHHHHHHHHTTC---EEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCG--GGEEEEEEESSBTTTTSBCCCHHHHH
T ss_pred             chhHHHHHHcCC---EEEEecccccccccccccccCCCCHHHHHHHHHhccc--cceeEEEEeccCCCCCCccCCHHHHH
Confidence            788899999999   9999998732    1    268999999999987541  1234677777877 9999866   99


Q ss_pred             HHHHHHHHhCCEEEeeccccch---------hccCccch-hh--hcCCCCCceeEecccccccCCCcceEEEEeCchhHH
Q 010842          267 PLAEVANEYGIWVHVDAAYAGS---------ACICPEFR-HY--LNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLV  334 (499)
Q Consensus       267 ~I~~ia~~~~~~lhvD~A~g~~---------~~~~~~~~-~~--~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~  334 (499)
                      +|+++|++||+|+|+|++|+.+         ........ ..  ..+ ...|.+++++||+++.| .+|+++.++++...
T Consensus       199 ~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~~S~kk~~~~~-~gG~~~~~~~~~~~  276 (456)
T 2ez2_A          199 AVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMF-SYADGCTMSGKKDCLVN-IGGFLCMNDDEMFS  276 (456)
T ss_dssp             HHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHH-TTCSEEEEETTTTTCCS-SCEEEEESCHHHHH
T ss_pred             HHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhc-ccCCEEEEeCcccCCCC-ceeEEEECCHHHHH
Confidence            9999999999999999999763         11111110 00  001 13688888899998755 46777775554332


Q ss_pred             HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHH-HHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNL-QSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~-~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                      ........+. +..             ...+.....+.. +++...  +.+ ++..++..++++++.+.|++. +++++.
T Consensus       277 ~~~~~~~~~~-~~~-------------~~~~~~~~~~~a-~a~~~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~  338 (456)
T 2ez2_A          277 SAKELVVVYE-GMP-------------SYGGLAGRDMEA-MAIGLR--EAMQYEYIEHRVKQVRYLGDKLKAA-GVPIVE  338 (456)
T ss_dssp             HHHHHHHHHT-CCT-------------TTTTCCHHHHHH-HHHHHH--HHTCHHHHHHHHHHHHHHHHHHHHT-TCCBCS
T ss_pred             HHHHHHhhcc-Ccc-------------cccCcchhHHHH-HHHHHH--HHhHHHHHHHHHHHHHHHHHHHhcC-CCcccc
Confidence            2111111110 000             000111112211 122221  333 467777888889999999885 777655


Q ss_pred             CCCceEEEEEecC--CCCCCcchhHHH-HHHHHHHH-HhcCCEEEEeee-------------ECCEEEEEEeccCCCCcH
Q 010842          414 PRHFALVCFRLNP--YPHSGSADTEML-NRKLLDWV-NSTGRVYLTHTI-------------VGGLYMLRFAVGASLTDE  476 (499)
Q Consensus       414 ~~~~~~v~f~~~~--~~~~~~~~~~~~-~~~l~~~l-~~~g~~~~~~~~-------------~~g~~~lRi~~~~~~~t~  476 (499)
                      +.....+.+.+..  .. .+   ...+ .+.+.++| .+.|+..+....             ..+..++|+++....+++
T Consensus       339 p~~~~~~~~~~~~~~~~-~~---~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~  414 (456)
T 2ez2_A          339 PVGGHAVFLDARRFCEH-LT---QDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTY  414 (456)
T ss_dssp             SCCSSEEEEEHHHHTTT-SC---GGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCH
T ss_pred             CCCceEEEEEhHHhcCC-CC---hhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCH
Confidence            5444555555421  11 01   1222 45556666 466754433221             112367999996333799


Q ss_pred             HHHHHHHHHHHHHHHHHh
Q 010842          477 RHVVAAWELIMEGADRLF  494 (499)
Q Consensus       477 ~di~~l~~~l~~~~~~l~  494 (499)
                      +||++++++|+++.++..
T Consensus       415 e~i~~~~~~l~~~l~~~~  432 (456)
T 2ez2_A          415 AHMDVVADGIIKLYQHKE  432 (456)
T ss_dssp             HHHHHHHHHHHHHHHTGG
T ss_pred             HHHHHHHHHHHHHHhhhh
Confidence            999999999999887643

>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*

Probab=99.87  E-value=1.4e-21  Score=199.14  Aligned_cols=308  Identities=12%  Similarity=0.047  Sum_probs=191.5

Q ss_pred             hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH---
Q 010842          126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA---  202 (499)
Q Consensus       126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~---  202 (499)
                      ....+++.+.+++++++|.+...        +++++||+|+..++.+...           ++..|+++..+|.++.   
T Consensus        73 ~~~~~~~~~~~~la~~~~~~~~~--------v~~~sGs~a~~~a~~~~~~-----------~gd~v~~~~~~~~~~~~~~  133 (420)
T 3gbx_A           73 YVDVVEQLAIDRAKELFGADYAN--------VQPHSGSQANFAVYTALLQ-----------PGDTVLGMNLAQGGHLTHG  133 (420)
T ss_dssp             -CHHHHHHHHHHHHHHHTCSEEE--------CCCSSHHHHHHHHHHHHCC-----------TTCEEEEEEEC--------
T ss_pred             HHHHHHHHHHHHHHHHhCCCCce--------eEecCcHHHHHHHHHHhcC-----------CCCEEEecchhhcceeccc
Confidence            34567888889999999997653        5566779999888776532           5667888888898743   


Q ss_pred             HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842          203 KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD  282 (499)
Q Consensus       203 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD  282 (499)
                      ......|.+. ..+.++.+.  ++.+|+++|++++++..     +.+|+++.+++  |...|+++|+++|++||+++++|
T Consensus       134 ~~~~~~g~~~-~~~~~~~~~--~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~--~~~~~l~~l~~l~~~~~~~li~D  203 (420)
T 3gbx_A          134 SPVNFSGKLY-NIVPYGIDE--SGKIDYDEMAKLAKEHK-----PKMIIGGFSAY--SGVVDWAKMREIADSIGAYLFVD  203 (420)
T ss_dssp             ----CHHHHS-EEEEEEECT--TCSCCHHHHHHHHHHHC-----CSEEEECCTTC--CSCCCHHHHHHHHHHTTCEEEEE
T ss_pred             hhhhhcccce-eEEeccCCc--cCCcCHHHHHHHHHhcC-----CeEEEEecCcc--CCccCHHHHHHHHHHcCCEEEEE
Confidence            2222334310 334455553  46899999999998741     23666666655  56889999999999999999999


Q ss_pred             ccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCc-hhHHHhhcCCccCCCCCCCCCCCcccCCCcc
Q 010842          283 AAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQP-GLLVKALSTDPEYLKNKPSESNSVVDFKDWQ  361 (499)
Q Consensus       283 ~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~-~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~  361 (499)
                      ++|+.+......+..   .+..+|+++.++||++++|.| |+++.++. ..+.+.+..   +.....             
T Consensus       204 e~~~~~~~~~~~~~~---~~~~~di~~~s~sK~~~g~~g-g~~~~~~~~~~~~~~~~~---~~~~~~-------------  263 (420)
T 3gbx_A          204 MAHVAGLIAAGVYPN---PVPHAHVVTTTTHKTLAGPRG-GLILAKGGDEELYKKLNS---AVFPSA-------------  263 (420)
T ss_dssp             CTTTHHHHHTTSSCC---STTTSSEEEEESSGGGCSCSC-EEEEESSCCHHHHHHHHH---HHC----------------
T ss_pred             CCcchhceecccCCc---ccccCCEEEeecccCCCCCCc-eEEEEcCCcHHHHHHhhh---hcCCCC-------------
Confidence            998655432222111   123489999999999977764 77777651 112222211   000000             


Q ss_pred             cCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcchhHHHH
Q 010842          362 VGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSADTEMLN  439 (499)
Q Consensus       362 ~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~  439 (499)
                       ..+... ....+..++.....++++++.++..++++++.+.|++ .+++++.+ +..+.+.+.+.+..        ...
T Consensus       264 -~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~--------~~~  333 (420)
T 3gbx_A          264 -QGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLN-RGYKVVSGGTENHLFLLDLVDKN--------LTG  333 (420)
T ss_dssp             --CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHH-TTCEEGGGSCSSSEEEEECGGGT--------CCH
T ss_pred             -CCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHh-cCCeeccCCCCCeEEEEEcCCCC--------CCH
Confidence             000000 1123344454444577888999999999999999988 48888753 45566666664321        013


Q ss_pred             HHHHHHHHhcCCEEEEe------eeECCEEEEEEeccCC---CCcHHHHHHHHHHHHHHHHH
Q 010842          440 RKLLDWVNSTGRVYLTH------TIVGGLYMLRFAVGAS---LTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       440 ~~l~~~l~~~g~~~~~~------~~~~g~~~lRi~~~~~---~~t~~di~~l~~~l~~~~~~  492 (499)
                      ..+.+.|.+.|+.+...      ....+...+|+++...   ..++++|++++++|+++.++
T Consensus       334 ~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~  395 (420)
T 3gbx_A          334 KEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDN  395 (420)
T ss_dssp             HHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHCCcEeccccCCCCccccCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhC
Confidence            45566676778654331      1112234499988421   24589999999999887654

>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3

Probab=99.87  E-value=2.9e-20  Score=187.69  Aligned_cols=283  Identities=16%  Similarity=0.176  Sum_probs=193.2

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK  203 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k  203 (499)
                      .|...+++++    +++++|.+..         +++++||+|+..++.++..           ++..|+++...|.++..
T Consensus        51 ~~~~~~l~~~----la~~~~~~~~---------i~~~sGt~a~~~~~~~~~~-----------~g~~vl~~~~~~~~~~~  106 (386)
T 1cs1_A           51 NPTRDVVQRA----LAELEGGAGA---------VLTNTGMSAIHLVTTVFLK-----------PGDLLVAPHDCYGGSYR  106 (386)
T ss_dssp             CHHHHHHHHH----HHHHHTCSEE---------EEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHH
T ss_pred             CccHHHHHHH----HHHHhCCCcE---------EEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCCcHhHHH
Confidence            3555555555    7788887633         6667779999988877632           45678888899988555


Q ss_pred             H----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842          204 V----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV  279 (499)
Q Consensus       204 a----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l  279 (499)
                      .    ++..|+   +++.+|.+       |+++|+++++++      +.+|+++.++|++|.+.|+++|+++|++||+++
T Consensus       107 ~~~~~~~~~g~---~~~~~~~~-------d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~l  170 (386)
T 1cs1_A          107 LFDSLAKRGCY---RVLFVDQG-------DEQALRAALAEK------PKLVLVESPSNPLLRVVDIAKICHLAREVGAVS  170 (386)
T ss_dssp             HHHHHHTTTSC---EEEEECTT-------CHHHHHHHHHTC------CSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEE
T ss_pred             HHHHHHHhcCC---EEEEeCCC-------CHHHHHHhhccC------CcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEE
Confidence            4    355677   88888753       889999999753      347888999999999999999999999999999


Q ss_pred             EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc--eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842          280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC--CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF  357 (499)
Q Consensus       280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~--g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  357 (499)
                      |+|++|+++....+.    .   ..+|.++.++||+++.|.+.  |++++++++... .+.......             
T Consensus       171 i~De~~~~~~~~~~~----~---~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~-~l~~~~~~~-------------  229 (386)
T 1cs1_A          171 VVDNTFLSPALQNPL----A---LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVT-ELAWWANNI-------------  229 (386)
T ss_dssp             EEECTTTCTTTCCGG----G---GTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHH-HHHHHHHHH-------------
T ss_pred             EEECCCcccccCCcc----c---cCceEEEEcCcccccCCCCceeEEEEeCcHHHHH-HHHHHHHhc-------------
Confidence            999999887543221    1   14899999999999988764  888887643322 221100000             


Q ss_pred             CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-C----------------CCceEE
Q 010842          358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-P----------------RHFALV  420 (499)
Q Consensus       358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~----------------~~~~~v  420 (499)
                             +.....+..|++++.+  +.+.++.++..++++++.+.|++++.+.-.. +                ...+++
T Consensus       230 -------~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~  300 (386)
T 1cs1_A          230 -------GVTGGAFDSYLLLRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAML  300 (386)
T ss_dssp             -------TCBCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEE
T ss_pred             -------CCCCCHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEE
Confidence                   0011234445544443  4566677788888999999998887764331 1                125678


Q ss_pred             EEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC---------------------------CEEEEEEeccCCC
Q 010842          421 CFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG---------------------------GLYMLRFAVGASL  473 (499)
Q Consensus       421 ~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---------------------------g~~~lRi~~~~~~  473 (499)
                      +|.+...           ...+.+.|.+.|+.. .+..+.                           ...++|+++. ..
T Consensus       301 ~~~~~~~-----------~~~~~~~l~~~gi~~-~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~-~~  367 (386)
T 1cs1_A          301 SFELDGD-----------EQTLRRFLGGLSLFT-LAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTG-IE  367 (386)
T ss_dssp             EEEESSC-----------HHHHHHHHHTCSSSE-EBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECC-SS
T ss_pred             EEEECCC-----------HHHHHHHHHhCCcce-EcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEc-cC
Confidence            8877531           234566666777643 321111                           1368999996 67


Q ss_pred             CcHHHHHHHHHHHHHH
Q 010842          474 TDERHVVAAWELIMEG  489 (499)
Q Consensus       474 ~t~~di~~l~~~l~~~  489 (499)
                      +++++|+.+.++|+++
T Consensus       368 ~~~~~i~~l~~al~~~  383 (386)
T 1cs1_A          368 DGEDLIADLENGFRAA  383 (386)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHh
Confidence            8888899888888765

>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*

Probab=99.87  E-value=1.9e-20  Score=186.82  Aligned_cols=284  Identities=13%  Similarity=0.088  Sum_probs=196.2

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCC-eEEEcCCCCchhHHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHK-LVVYGSDQTHSTFAKVC  205 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~-~~i~~s~~~H~s~~ka~  205 (499)
                      ..+++++    +++++|.+.+       ..++|+|+|+++..++.+..+           ++ ..|+++..+|.++..++
T Consensus        60 ~~~lr~~----la~~~~~~~~-------~v~~~~G~~~ai~~~~~~~~~-----------~g~d~Vl~~~p~~~~~~~~~  117 (356)
T 1fg7_A           60 PKAVIEN----YAQYAGVKPE-------QVLVSRGADEGIELLIRAFCE-----------PGKDAILYCPPTYGMYSVSA  117 (356)
T ss_dssp             CHHHHHH----HHHHHTSCGG-------GEEEESHHHHHHHHHHHHHCC-----------TTTCEEEECSSSCTHHHHHH
T ss_pred             HHHHHHH----HHHHhCCChH-------HEEEcCCHHHHHHHHHHHHhC-----------CCCCEEEEeCCChHHHHHHH
Confidence            4555555    7777788654       358999999998888776632           44 67888999999999999


Q ss_pred             HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHH---HHHHHhCCEEEee
Q 010842          206 KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLA---EVANEYGIWVHVD  282 (499)
Q Consensus       206 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~---~ia~~~~~~lhvD  282 (499)
                      +..|.   +++.+|.++  +|.+|+++|+++++ +      +.+|+++.++|+||.+-|.++|.   ++|+ +|+++++|
T Consensus       118 ~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~-~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~D  184 (356)
T 1fg7_A          118 ETIGV---ECRTVPTLD--NWQLDLQGISDKLD-G------VKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVAD  184 (356)
T ss_dssp             HHHTC---EEEECCCCT--TSCCCHHHHHTSCT-T------EEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEE
T ss_pred             HHcCC---EEEEeeCCC--CCCCCHHHHHHHhc-C------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEE
Confidence            99999   999999874  46899999998875 2      34788889999999997765554   5555 89999999


Q ss_pred             ccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCc
Q 010842          283 AAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDW  360 (499)
Q Consensus       283 ~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~  360 (499)
                      ++|+.+.. ......... ....+.+..+.+|+++.| ..+|+++.++ +.. +.+.. ...|                 
T Consensus       185 e~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-~~~-~~l~~~~~~~-----------------  243 (356)
T 1fg7_A          185 EAYIEFCP-QASLAGWLA-EYPHLAILRTLSKAFALAGLRCGFTLANE-EVI-NLLMKVIAPY-----------------  243 (356)
T ss_dssp             CTTGGGSG-GGCSGGGTT-TCTTEEEEEESSSTTCCGGGCCEEEEECH-HHH-HHHHHHSCSS-----------------
T ss_pred             ccchhhcC-CCcHHHHHh-hCCCEEEEecchHhhcCchhhhEEEEeCH-HHH-HHHHHhcCCC-----------------
Confidence            99987641 111111111 112567788999999744 4578888843 322 22211 1111                 


Q ss_pred             ccCCCCCCCcHHHHHHHHHhcHHH---HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHH
Q 010842          361 QVGTGRRFKSLRLWMVLRSYGVLN---LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEM  437 (499)
Q Consensus       361 ~~~~sr~~~al~~~~~l~~~g~~g---~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~  437 (499)
                            ....+..+++...+...+   +++..++..++++++.+.|++++++..+.++..+.+.+++.  .         
T Consensus       244 ------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~--~---------  306 (356)
T 1fg7_A          244 ------PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFK--A---------  306 (356)
T ss_dssp             ------CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEET--T---------
T ss_pred             ------CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECC--C---------
Confidence                  112455566666665444   67788888899999999999987654444556666777664  2         


Q ss_pred             HHHHHHHHHHhcCCEEEE-eeeECCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          438 LNRKLLDWVNSTGRVYLT-HTIVGGLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       438 ~~~~l~~~l~~~g~~~~~-~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                       ..++.++|.++|+.+.. +..+....++|+++.    +++|+++++++|++
T Consensus       307 -~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~~----~~~e~~~~~~~l~~  353 (356)
T 1fg7_A          307 -SSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG----TREESQRVIDALRA  353 (356)
T ss_dssp             -HHHHHHHHHHTTEECEECTTSTTCTTEEEEECC----CHHHHHHHHHHHHT
T ss_pred             -HHHHHHHHHHCCEEEEECCCCCCCCCeEEEEeC----CHHHHHHHHHHHHh
Confidence             35677778777855433 222222347999985    58999999999875

>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}

Probab=99.87  E-value=1.5e-20  Score=187.62  Aligned_cols=301  Identities=12%  Similarity=0.013  Sum_probs=189.8

Q ss_pred             cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh
Q 010842          121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST  200 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s  200 (499)
                      |...+...+++    +++++++|.+..         ++++|||+|+..++.+.....         ++.+|+++...|++
T Consensus        44 ~~~~~~~~~l~----~~la~~~~~~~~---------i~~~~g~~a~~~a~~~~~~~g---------~~~vvi~~~~~~~~  101 (359)
T 3pj0_A           44 YGNGAVIEDFE----TKIAKILGKQSA---------VFFPSGTMAQQIALRIWADRK---------ENRRVAYHPLSHLE  101 (359)
T ss_dssp             TTBSHHHHHHH----HHHHHHHTCSEE---------EEESCHHHHHHHHHHHHHHHH---------TCCEEEECTTCHHH
T ss_pred             ccCCHHHHHHH----HHHHHHhCCCcE---------EEeCCHHHHHHHHHHHHHhcC---------CCcEEEEeccceee
Confidence            44445555555    458888988654         777999999999888776531         23357777778876


Q ss_pred             HHHH---HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc-cccCChhHH---HHHHH
Q 010842          201 FAKV---CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST-TAVDNVEPL---AEVAN  273 (499)
Q Consensus       201 ~~ka---~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~-G~id~l~~I---~~ia~  273 (499)
                      ....   +...|.   .++.+|.+   ++.+|+++|+++ .+      .+.+|+++.++|++ |.+.|++++   +++|+
T Consensus       102 ~~~~~~~~~~~g~---~~~~v~~~---~~~~d~~~l~~~-~~------~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~  168 (359)
T 3pj0_A          102 IHEQDGLKELQQI---TPLLLGTA---NQLLTIDDIKSL-RE------PVSSVLIELPQREIGGQLPAFEELEKISEYCH  168 (359)
T ss_dssp             HSSTTHHHHHHCC---EEEECSCT---TSCCCHHHHHTC-SS------CCSEEEEESSBGGGTSBCCCHHHHHHHHHHHH
T ss_pred             ehhcchHHHhcCc---eEEecCCc---CCCcCHHHHHhc-cC------CceEEEEEecccCCCcccCCHHHHHHHHHHHH
Confidence            5432   356788   88888873   358999999987 22      24477888887777 788665555   99999


Q ss_pred             HhCCEEEeeccccchhcc--CccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCC
Q 010842          274 EYGIWVHVDAAYAGSACI--CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSES  351 (499)
Q Consensus       274 ~~~~~lhvD~A~g~~~~~--~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~  351 (499)
                      +||+|+|+|++|..+...  ........   ..+|++++++||+++.|.+ |+++ .+++... .+..........    
T Consensus       169 ~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d~~~~s~sK~~~~~~g-g~~~-~~~~l~~-~~~~~~~~~~~~----  238 (359)
T 3pj0_A          169 EQGISLHLDGARLWEITPFYQKSAEEIC---ALFDSVYVSFYKGIGGIAG-AILA-GNDDFVQ-EAKIWKRRYGGD----  238 (359)
T ss_dssp             HHTCEEEEEETTCGGGHHHHTCCHHHHH---TTCSEEEEESSSTTCCSSC-EEEE-ECHHHHH-HHHHHHHHTTCC----
T ss_pred             HcCCEEEEECcchhcchhhhCCCHHHhh---ccCCEEEEeccccCCCcce-EEEE-CCHHHHH-HHHHHHHHhCCC----
Confidence            999999999998644311  11111222   3489999999999988855 5544 4444332 221100000000    


Q ss_pred             CCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cCCCceEEEEEecCCCCC
Q 010842          352 NSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VPRHFALVCFRLNPYPHS  430 (499)
Q Consensus       352 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~v~f~~~~~~~~  430 (499)
                                   ... ......+++..+  +...+.+++..++++++.+.|+++|++++. .++..+.+.+++....  
T Consensus       239 -------------~~~-~~~~~~a~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~--  300 (359)
T 3pj0_A          239 -------------LIS-LYPYILSADYYF--EKRIGKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSA--  300 (359)
T ss_dssp             -------------CSC-CHHHHHHHHHHH--HHHGGGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCH--
T ss_pred             -------------cch-hHHHHHHHHHHH--HHHHHHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCcc--
Confidence                         000 011111111122  112245566788899999999999999986 4566777777775421  


Q ss_pred             CcchhHHHHHHHHHHHHhcCCEEEEeee--ECCEEEEEEeccCC--CCcHHHHHHHHHHHHHH
Q 010842          431 GSADTEMLNRKLLDWVNSTGRVYLTHTI--VGGLYMLRFAVGAS--LTDERHVVAAWELIMEG  489 (499)
Q Consensus       431 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~~g~~~lRi~~~~~--~~t~~di~~l~~~l~~~  489 (499)
                           ......+.+.|.++|+.+..+..  ..+..++|+++...  ..+.+++++.++.|.+.
T Consensus       301 -----~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~  358 (359)
T 3pj0_A          301 -----DEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE  358 (359)
T ss_dssp             -----HHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred             -----chhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence                 22356778888888865433322  25678899988522  35788888888887654

>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*

Probab=99.87  E-value=1.1e-20  Score=193.44  Aligned_cols=282  Identities=13%  Similarity=0.134  Sum_probs=191.8

Q ss_pred             HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH----HHH
Q 010842          132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV----CKL  207 (499)
Q Consensus       132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka----~~~  207 (499)
                      .++.+++++++|.+..         +++++|++|+..++.+..+           ++..|+++...|.++...    +..
T Consensus       117 ~~l~~~lA~l~g~~~~---------v~~~sG~~Ai~~al~~l~~-----------~Gd~Vi~~~~~y~~~~~~~~~~~~~  176 (445)
T 1qgn_A          117 VVLEEKISALEGAEST---------LLMASGMCASTVMLLALVP-----------AGGHIVTTTDCYRKTRIFIETILPK  176 (445)
T ss_dssp             HHHHHHHHHHHTCSEE---------EEESCHHHHHHHHHHHHSC-----------SSCEEEEETTSCHHHHHHHHHTGGG
T ss_pred             HHHHHHHHHHhCCCcE---------EEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhHHHHHHHHHHH
Confidence            3344458888888643         7777888999888875532           456788888899887664    455


Q ss_pred             hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842          208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG  287 (499)
Q Consensus       208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~  287 (499)
                      .|+   +++.||.+       |+++|+++|++++     +.+|++..++|++|.+.|+++|+++|+++|+++|+|++|+.
T Consensus       177 ~G~---~v~~v~~~-------d~~~l~~ai~~~t-----v~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~  241 (445)
T 1qgn_A          177 MGI---TATVIDPA-------DVGALELALNQKK-----VNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFAT  241 (445)
T ss_dssp             GTC---EEEEECSS-------CHHHHHHHHHHSC-----EEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTC
T ss_pred             cCC---EEEEeCCC-------CHHHHHHHhccCC-----CCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcc
Confidence            788   88888753       8999999998643     24788899999999999999999999999999999999986


Q ss_pred             hhccCccchhhhcCCCCCceeEecccccccCCC--cceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCC
Q 010842          288 SACICPEFRHYLNGIERVDSFSFSPHKWLLSYL--DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTG  365 (499)
Q Consensus       288 ~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~--~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s  365 (499)
                      +....+    .  . .++|.++.+.||+++.+.  .+|+++.++. .+ +.+..   +...                 .+
T Consensus       242 ~~~~~~----~--~-~g~Div~~S~sK~~gg~gd~~~G~l~~~~~-l~-~~l~~---~~~~-----------------~g  292 (445)
T 1qgn_A          242 PLNQKA----L--A-LGADLVLHSATKFLGGHNDVLAGCISGPLK-LV-SEIRN---LHHI-----------------LG  292 (445)
T ss_dssp             TTTCCT----T--T-TTCSEEEECTTTTTTCSSSCCCEEEEECHH-HH-HHHHH---HHHH-----------------HC
T ss_pred             cccCCc----c--c-cCCEEEEECCcccccccccceEEEEEECHH-HH-HHHHH---HHHH-----------------hC
Confidence            543221    1  1 148999999999998553  2888887653 22 22210   0000                 01


Q ss_pred             CCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe-EEEcC-----C-----------CceEEEEEecCCC
Q 010842          366 RRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRF-EIVVP-----R-----------HFALVCFRLNPYP  428 (499)
Q Consensus       366 r~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~-~~~~~-----~-----------~~~~v~f~~~~~~  428 (499)
                      .....+..|+.++.+  +.+..++++..++++++.+.|++.|++ .+..+     |           ..++++|.+.+. 
T Consensus       293 ~~~~~~~a~~~~~~l--~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~-  369 (445)
T 1qgn_A          293 GALNPNAAYLIIRGM--KTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGD-  369 (445)
T ss_dssp             CCCCHHHHHHHHHHG--GGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSC-
T ss_pred             CCCCHHHHHHHHHhH--HHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCC-
Confidence            112345556665544  667778888888999999999999988 44433     1           357889988642 


Q ss_pred             CCCcchhHHHHHHHHHHHHhcC------CEE---EEeee------------ECC--EEEEEEeccCCCCcHHHHHHHHHH
Q 010842          429 HSGSADTEMLNRKLLDWVNSTG------RVY---LTHTI------------VGG--LYMLRFAVGASLTDERHVVAAWEL  485 (499)
Q Consensus       429 ~~~~~~~~~~~~~l~~~l~~~g------~~~---~~~~~------------~~g--~~~lRi~~~~~~~t~~di~~l~~~  485 (499)
                             .....++++.+...+      .++   ..+..            ..|  ...+|+|++     .||++.+++.
T Consensus       370 -------~~~~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG-----~Edid~li~~  437 (445)
T 1qgn_A          370 -------LLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG-----VEDFDDLKAD  437 (445)
T ss_dssp             -------HHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC-----SSCHHHHHHH
T ss_pred             -------HHHHHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEec-----cCCHHHHHHH
Confidence                   122455666553212      111   10000            012  368999996     3589999999


Q ss_pred             HHHHHHH
Q 010842          486 IMEGADR  492 (499)
Q Consensus       486 l~~~~~~  492 (499)
                      |+++.+.
T Consensus       438 L~~al~~  444 (445)
T 1qgn_A          438 ILQALDS  444 (445)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhh
Confidence            9988764

>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}

Probab=99.87  E-value=3.5e-21  Score=196.37  Aligned_cols=257  Identities=14%  Similarity=0.125  Sum_probs=179.0

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|...++|+.    +++++|.+..         +++++|++|+..++.+...           ++..|+++...|.+..
T Consensus        80 ~~p~~~~le~~----lA~l~g~~~~---------v~~~sG~~Ai~~al~al~~-----------~Gd~Vi~~~~~y~~~~  135 (430)
T 3ri6_A           80 SNPTVEDLEQR----LKNLTGALGV---------LALGSGMAAISTAILTLAR-----------AGDSVVTTDRLFGHTL  135 (430)
T ss_dssp             CCHHHHHHHHH----HHHHHTCSEE---------EEESCHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHH
T ss_pred             CCHHHHHHHHH----HHHHHCCCcE---------EEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhHH
Confidence            45666666666    8888887653         8888999998888876632           5678889999998877


Q ss_pred             H----HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCE
Q 010842          203 K----VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIW  278 (499)
Q Consensus       203 k----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~  278 (499)
                      .    .+...|+   +++.||.+       |+++|+++|+++      +.+|++..++|++|.+.|+++|+++|+++|++
T Consensus       136 ~~~~~~~~~~G~---~~~~v~~~-------d~~~l~~ai~~~------t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~  199 (430)
T 3ri6_A          136 SLFQKTLPSFGI---EVRFVDVM-------DSLAVEHACDET------TKLLFLETISNPQLQVADLEALSKVVHAKGIP  199 (430)
T ss_dssp             HHHHTHHHHTTC---EEEEECTT-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHTTTCC
T ss_pred             HHHHHHHHHcCC---EEEEeCCC-------CHHHHHHhhCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence            7    6678898   89998864       899999998654      34888999999999999999999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCC--CcceEEEEeCchhHH---------HhhcCCccCCCCC
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY--LDCCCLWVKQPGLLV---------KALSTDPEYLKNK  347 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p--~~~g~l~~r~~~~l~---------~~~~~~~~yl~~~  347 (499)
                      +++|++|+.+....+.    ..   ++|.++.+++|+++.|  .-+|+++.+....+.         +.+.. ..|+...
T Consensus       200 livD~a~~~~~~~~~~----~~---g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~-~~~i~~~  271 (430)
T 3ri6_A          200 LVVDTTMTPPYLLEAK----RL---GVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGP-MAFLYKA  271 (430)
T ss_dssp             EEEECTTSCTTTCCGG----GG---TCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGG-GHHHHHH
T ss_pred             EEEECCCcccccCChH----Hc---CCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhch-hhHHHHH
Confidence            9999999866542221    12   3899999999999876  246666654432110         00000 0000000


Q ss_pred             CCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC-----------
Q 010842          348 PSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH-----------  416 (499)
Q Consensus       348 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-----------  416 (499)
                               ...+....+.....+..|+.++  |.+.+..++++..++++++.+.|++.|+++.+..|.           
T Consensus       272 ---------~~~~~~~~g~~~~~~~a~l~l~--~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~  340 (430)
T 3ri6_A          272 ---------RKEVFQNLGPSLSPHNAYLQSL--GLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAK  340 (430)
T ss_dssp             ---------HHTHHHHHCCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHH
T ss_pred             ---------HHHHHHhcCCCCCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHH
Confidence                     0000001122234566676665  457888899999999999999999999988554333           


Q ss_pred             -----ce-EEEEEecCCCCCCcchhHHHHHHHHHHHH
Q 010842          417 -----FA-LVCFRLNPYPHSGSADTEMLNRKLLDWVN  447 (499)
Q Consensus       417 -----~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~  447 (499)
                           .+ +++|.+..         .....++.+.+.
T Consensus       341 ~~~g~Gg~~lsf~l~~---------~~~~~~~~~~l~  368 (430)
T 3ri6_A          341 RQFRYAGSILTFELES---------KEASYRFMDALK  368 (430)
T ss_dssp             HHCSSCCSEEEEECSS---------HHHHHHHHHHCS
T ss_pred             HhCCCCceEEEEEECC---------HHHHHHHHHhCC
Confidence                 34 88888863         234566666654

>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}

Probab=99.86  E-value=1.5e-20  Score=191.92  Aligned_cols=307  Identities=12%  Similarity=0.082  Sum_probs=190.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-HHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-FAKVCK  206 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-~~ka~~  206 (499)
                      ..+++...+++++++|.+...        ++++|||+|+..++.+...           ++..|+++..+|.+ +...+.
T Consensus        77 ~~~~~~a~~~~~~~~~~~~~~--------v~~~~Gs~a~~~al~~~~~-----------~gd~Vi~~~~~~~~~~~~~~~  137 (425)
T 3ecd_A           77 DEVEALAIERVKRLFNAGHAN--------VQPHSGAQANGAVMLALAK-----------PGDTVLGMSLDAGGHLTHGAK  137 (425)
T ss_dssp             CHHHHHHHHHHHHHHTCSEEE--------CCCSSHHHHHHHHHHHHCC-----------TTCEEEEECC-----------
T ss_pred             HHHHHHHHHHHHHHhCCCCce--------eecCchHHHHHHHHHHccC-----------CCCEEEEcccccccceecchh
Confidence            355666668899999987642        5689999999888876632           56678889999987 323333


Q ss_pred             --HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecc
Q 010842          207 --LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAA  284 (499)
Q Consensus       207 --~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A  284 (499)
                        ..|.+. .++.++.+++ ++.+|+++|++++.+..     +.+|+++.+++  |...++++|.++|++||+++|+|++
T Consensus       138 ~~~~g~~~-~~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~~~v~~~~~~~--~~~~~l~~i~~l~~~~~~~li~De~  208 (425)
T 3ecd_A          138 PALSGKWF-NALQYGVSRD-TMLIDYDQVEALAQQHK-----PSLIIAGFSAY--PRKLDFARFRAIADSVGAKLMVDMA  208 (425)
T ss_dssp             -------C-EEEEECCCTT-TSSCCHHHHHHHHHHHC-----CSEEEEECSCC--CSCCCHHHHHHHHHHHTCEEEEECG
T ss_pred             hhhcccce-eeeecCCCcc-cCccCHHHHHHHHhhcC-----CcEEEEccccC--CCcCCHHHHHHHHHHcCCEEEEECc
Confidence              444411 3345555543 47999999999997531     23666665554  7889999999999999999999999


Q ss_pred             ccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCC
Q 010842          285 YAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGT  364 (499)
Q Consensus       285 ~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~  364 (499)
                      |+.+....+.....   +..+|+++.++||++.+|. +|+++.+++... +.+..   +....              ...
T Consensus       209 ~~~g~~~~~~~~~~---~~~~di~~~s~sK~l~g~~-~g~~~~~~~~~~-~~~~~---~~~~~--------------~~~  266 (425)
T 3ecd_A          209 HIAGVIAAGRHANP---VEHAHVVTSTTHKTLRGPR-GGFVLTNDEEIA-KKINS---AVFPG--------------LQG  266 (425)
T ss_dssp             GGHHHHHTTSSCCG---GGTCSEEEEESSGGGCCCS-CEEEEESCHHHH-HHHHH---HHC-------------------
T ss_pred             ChHhhhhcccccCc---hhcCcEEEecCCcccCCCC-cEEEEeCCHHHH-HHHHh---hhCcc--------------ccC
Confidence            76554432222111   2237999999999997665 588777754332 22211   00000              000


Q ss_pred             CCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcchhHHHHHHH
Q 010842          365 GRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSADTEMLNRKL  442 (499)
Q Consensus       365 sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~l  442 (499)
                      +... ....+++++.....++++++.++..++++++.+.|++. +++++.+ +..+++.+.+.+..        .....+
T Consensus       267 ~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~--------~~~~~~  337 (425)
T 3ecd_A          267 GPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTDNHLLLVDLRPKG--------LKGAQV  337 (425)
T ss_dssp             CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT--------CCHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCceEEEEEeCCCC--------CCHHHH
Confidence            0000 12334445544455778889999999999999999985 7888753 35566766665321        013456


Q ss_pred             HHHHHhcCCEEEEee---e---ECCEEEEEEecc---CCCCcHHHHHHHHHHHHHHHHHH
Q 010842          443 LDWVNSTGRVYLTHT---I---VGGLYMLRFAVG---ASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       443 ~~~l~~~g~~~~~~~---~---~~g~~~lRi~~~---~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .+.|.++|+.+....   .   ......+|+++.   ....++++|++++++|+++.++.
T Consensus       338 ~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~  397 (425)
T 3ecd_A          338 EQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL  397 (425)
T ss_dssp             HHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence            666767785443211   0   112346999853   23345999999999999887765

>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}

Probab=99.86  E-value=6.1e-20  Score=189.03  Aligned_cols=307  Identities=12%  Similarity=0.005  Sum_probs=202.7

Q ss_pred             cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842          119 FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH  198 (499)
Q Consensus       119 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H  198 (499)
                      ..|...++..++++++.+|+.  .|++...     ...++|+|+++++..+ .+..+           ++..|+++..+|
T Consensus       105 ~~y~~~~g~~~lr~~ia~~~~--~g~~~~~-----~~i~~t~G~~~al~~~-~~l~~-----------~gd~Vl~~~p~~  165 (449)
T 3qgu_A          105 SGYGAEQGQGALREAVASTFY--GHAGRAA-----DEIFISDGSKCDIARI-QMMFG-----------SKPTVAVQDPSY  165 (449)
T ss_dssp             CCSTTTTCCHHHHHHHHHHHH--TTTTCCG-----GGEEEESCHHHHHHHH-HHHHC-----------SSSCEEEEESCC
T ss_pred             CCCCCCCCcHHHHHHHHHHHH--cCCCCCH-----HHEEEccCHHHHHHHH-HHHhC-----------CCCEEEEcCCCC
Confidence            455555667889999887776  5543221     2468999999887665 33221           466788899999


Q ss_pred             hhHHHHHHHhCCCCCC----------eEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---h
Q 010842          199 STFAKVCKLAGVSPAN----------IRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---V  265 (499)
Q Consensus       199 ~s~~ka~~~~G~g~~~----------v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l  265 (499)
                      .++..+++..|.   +          ++.+|++.++.+..|++++           ..+.+|+++.++|+||.+-+   +
T Consensus       166 ~~~~~~~~~~g~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~v~l~~p~NPtG~~~~~~~l  231 (449)
T 3qgu_A          166 PVYVDTSVMMGM---TGDHNGTGFDGIEYMVCNPDNHFFPDLSKA-----------KRTDIIFFCSPNNPTGAAATRAQL  231 (449)
T ss_dssp             THHHHHHHHHTC---SCCBCSSSBTTEEEEECCGGGTTCCCGGGC-----------CCCSEEEEESSCTTTCCCCCHHHH
T ss_pred             hhHHHHHHHcCC---cccccccccceeEEEecccccCCcCChhHc-----------CCCCEEEEeCCCCCCCCcCCHHHH
Confidence            999999999998   7          9999998765566665432           12346777799999999955   8


Q ss_pred             hHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEeccccccc-CCCcceEEEEeCchhH------HHh
Q 010842          266 EPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLL------VKA  336 (499)
Q Consensus       266 ~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l------~~~  336 (499)
                      ++|+++|++||+++++|++|+++..........  +.+....+.++.+.+|+++ ....+|+++.+++..-      ...
T Consensus       232 ~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~  311 (449)
T 3qgu_A          232 TELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHAD  311 (449)
T ss_dssp             HHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHH
T ss_pred             HHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHHH
Confidence            888999999999999999998864321111111  1112245688899999997 4467899887654210      000


Q ss_pred             hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG---VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                      +.....+                    .......+...++...+.   .+.++++.++..++++++.+.|++. ++++..
T Consensus       312 ~~~~~~~--------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~  370 (449)
T 3qgu_A          312 WNRVMTT--------------------CFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM-GFSVYG  370 (449)
T ss_dssp             HHHHHHH--------------------SCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEE
T ss_pred             HHHHhhc--------------------ccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeC
Confidence            0000000                    000112344555555543   3567788888999999999999988 788775


Q ss_pred             CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeE--CCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIV--GGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      +.....+.+.+....          ..++.++|.++ |+.+..+..+  .+..++|+++.   .++++|++++++|+++.
T Consensus       371 ~~~~~~~~~~~~~~~----------~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~---~~~e~i~~~l~~l~~~~  437 (449)
T 3qgu_A          371 GDDAPYIWVGFPGKP----------SWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAF---GSRENILEAVRRFKEAY  437 (449)
T ss_dssp             SSSSSEEEEECTTSC----------HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHHHHH
T ss_pred             CCCeeEEEEECCCCC----------HHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEec---CCHHHHHHHHHHHHHHH
Confidence            544566666664211          34566666665 7544443333  23478999975   48999999999999876


Q ss_pred             HH
Q 010842          491 DR  492 (499)
Q Consensus       491 ~~  492 (499)
                      ++
T Consensus       438 ~~  439 (449)
T 3qgu_A          438 GK  439 (449)
T ss_dssp             C-
T ss_pred             Hh
Confidence            54

>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}

Probab=99.86  E-value=1.6e-20  Score=191.49  Aligned_cols=333  Identities=8%  Similarity=-0.005  Sum_probs=211.7

Q ss_pred             hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      ++..+.+.+..........|....+..++++++.+|+.+..+.+..      ...++|+|||+|+..++.+..+      
T Consensus        57 ~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~------~~i~~t~g~~~al~~~~~~l~~------  124 (418)
T 3rq1_A           57 FLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKECFGNFRPEGH------IRSIATAGGTGGIHHLIHNYTE------  124 (418)
T ss_dssp             CCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSE------EEEEEESHHHHHHHHHHHHHSC------
T ss_pred             ccHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHHHhcccCcccc------ccEEECCchHHHHHHHHHHhcC------
Confidence            3344555555544323345655667889999988888777664311      1358999999999988876532      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecC-CCccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVG-TTSTT  260 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~g-tt~~G  260 (499)
                           ++..|+++.++|.++...++..|.   +++.+|+++++ +.+|+++|++++++..... ...+|+++.+ +|+||
T Consensus       125 -----~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~~~-~~~d~~~l~~~l~~~~~~~-~~~~vi~~~p~~NPtG  194 (418)
T 3rq1_A          125 -----PGDEVLTADWYWGAYRVICSDTGR---TLVTYSLFDEH-NNFNHEAFQNRVNELAAKQ-TNVVVIFNTPGNNPTG  194 (418)
T ss_dssp             -----TTCEEEEESSCCTHHHHHHHHTTC---EEEEECSBCTT-SSBCHHHHHHHHHHHHHHC-SEEEEEEECSSCTTTC
T ss_pred             -----CCCEEEECCCCchhHHHHHHHcCC---EEEEEeeeCCC-CCcCHHHHHHHHHHhhccC-CCEEEEEeCCCCCCCC
Confidence                 567788999999999999999999   99999986543 7999999999998642211 1236777778 89999


Q ss_pred             ccCChhHHH---HHHH------HhCCEEEeeccccchhccCccchhh---hcCCCCCc---eeEecccccccCC-CcceE
Q 010842          261 AVDNVEPLA---EVAN------EYGIWVHVDAAYAGSACICPEFRHY---LNGIERVD---SFSFSPHKWLLSY-LDCCC  324 (499)
Q Consensus       261 ~id~l~~I~---~ia~------~~~~~lhvD~A~g~~~~~~~~~~~~---~~g~~~aD---si~~~~hK~l~~p-~~~g~  324 (499)
                      .+-|.+++.   ++|+      +||+++++|++|.++..........   ..++. -|   .++.+.+|.++.| ...|+
T Consensus       195 ~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~sK~~~~~G~r~G~  273 (418)
T 3rq1_A          195 YSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLP-KEILTCVCYSLSKGFTMYGQRVGA  273 (418)
T ss_dssp             CCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCC-TTEEEEEEEESTTTTTCCSSCCEE
T ss_pred             CCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcC-CCceEEEEEeCCCCCcCcCCcceE
Confidence            997765555   5555      8999999999997654321111111   11221 23   5667899998754 55788


Q ss_pred             EEE--eCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH--------HHHHHHHHHHHH
Q 010842          325 LWV--KQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV--------LNLQSHIRSDIR  394 (499)
Q Consensus       325 l~~--r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~--------~g~~~~~~~~~~  394 (499)
                      ++.  ++++.. +.+.....+....                .......+...++...+..        +..+++.++..+
T Consensus       274 ~~~~~~~~~~~-~~~~~~~~~~~~~----------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~  336 (418)
T 3rq1_A          274 MIGISDDEEIA-DEFFEVNKSTSRA----------------TWSNICRPAMRTMANIVADPAKFKEYEAERNCYYQLIRD  336 (418)
T ss_dssp             EEEEESSHHHH-HHHHHHHHHHHHH----------------HTSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCHHHH-HHHHHHHHHHHhh----------------ccCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence            876  244332 2221111110000                0001123444444444422        123345566777


Q ss_pred             HHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCC
Q 010842          395 LAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLT  474 (499)
Q Consensus       395 ~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~  474 (499)
                      +++++.+.|+++ ++++. ++..+.+.|.-.+ .          ..++.+.|.++|+.+..+     ..++|++++  ..
T Consensus       337 ~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~-~----------~~~~~~~l~~~gi~v~~g-----~~~iRis~~--~~  396 (418)
T 3rq1_A          337 RADIFKQEAAQV-GLPML-PYRGGFFITIPTD-S----------ANAICEELKKEHIYVIAL-----ANGIRIAAC--GI  396 (418)
T ss_dssp             HHHHHHHHHHHH-TCCCC-CCCSSSEEEEECT-T----------HHHHHHHHHHTTEECEEC-----SSEEEEEGG--GS
T ss_pred             HHHHHHHHHHhc-CCCCC-CCCceEEEEcCCC-C----------HHHHHHHHHhCCEEEecC-----CCCeEEEEe--cC
Confidence            888888888887 77765 3444444332112 1          345667777778544332     346999974  35


Q ss_pred             cHHHHHHHHHHHHHHHHHHh
Q 010842          475 DERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       475 t~~di~~l~~~l~~~~~~l~  494 (499)
                      ++++|++++++|.++.+++.
T Consensus       397 ~~~~i~~~~~~l~~~l~~~~  416 (418)
T 3rq1_A          397 PKCQMTGLAEKIYNAMKSLG  416 (418)
T ss_dssp             CHHHHTTHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHHHh
Confidence            89999999999999987763

>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*

Probab=99.86  E-value=2.2e-20  Score=193.40  Aligned_cols=353  Identities=11%  Similarity=0.039  Sum_probs=201.1

Q ss_pred             cccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHH
Q 010842           91 NFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTL  170 (499)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al  170 (499)
                      .|+.+.++.+. +. +.+.+...+......|..++...+++++    +++++|.+.         +++|+|||+||..++
T Consensus        42 ~ylD~~~~~~~-~~-v~~a~~~~l~~~~~~y~~~~~~~~l~~~----la~~~~~~~---------v~~t~~gt~A~~~al  106 (467)
T 2oqx_A           42 VFIDLLTDSGT-GA-VTQSMQAAMMRGDEAYSGSRSYYALAES----VKNIFGYQY---------TIPTHQGRGAEQIYI  106 (467)
T ss_dssp             CSEECSCCSSC-SC-CCHHHHHHTTSCCCCSSSCHHHHHHHHH----HHHHHCCSE---------EEEEC--CCSHHHHH
T ss_pred             eeEecccCCCc-HH-HHHHHHHHhccCcceeccCchhHHHHHH----HHHHhCcCc---------EEEcCCcHHHHHHHH
Confidence            56666554443 33 3333444454333456666766666665    777777643         599999999999999


Q ss_pred             HHHHHHHHhHhhhhccCC-eEEEcCCCCchhH-HHHHHHhCCCCCCeEEe------eCCC--CCCCccCHHHHHHHHHHH
Q 010842          171 IAARDRALDAVGAENMHK-LVVYGSDQTHSTF-AKVCKLAGVSPANIRAL------PTSV--DANFSLSPQLLRRAVEAD  240 (499)
Q Consensus       171 ~~ar~~~~~~~~~~g~~~-~~i~~s~~~H~s~-~ka~~~~G~g~~~v~~v------~~~~--~~~~~~d~~~L~~~i~~~  240 (499)
                      .++++.....   .|.++ ..|+++ ..|+.. .......|.   .++..      +.+.  ..++.+|+++|+++|++.
T Consensus       107 ~~~~~~~~~~---~G~~~~d~Ii~~-~~h~~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~  179 (467)
T 2oqx_A          107 PVLIKKREQE---KGLDRSKMVAFS-NYFFDTTQGHSQINGC---TVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEV  179 (467)
T ss_dssp             HHHHHHHHHH---HCCCTTTCEEEE-SSCCHHHHHHHHHTTC---EEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHH
T ss_pred             HHHhcccccc---CCCCccceEEec-ccccccchhhhhccCc---ceeeccccccccCCCCCCccCCcCHHHHHHHHHhc
Confidence            9887531110   02111 335555 577553 333344454   44332      2220  013589999999999863


Q ss_pred             HHcCCccEEEEEecCCCcc-ccc---CChhHHHHHHHHhCCEEEeeccccc-hhc--------cCcc-chhhh-cCCCCC
Q 010842          241 VEAGLVPLFLCATVGTTST-TAV---DNVEPLAEVANEYGIWVHVDAAYAG-SAC--------ICPE-FRHYL-NGIERV  305 (499)
Q Consensus       241 ~~~g~~p~~vv~t~gtt~~-G~i---d~l~~I~~ia~~~~~~lhvD~A~g~-~~~--------~~~~-~~~~~-~g~~~a  305 (499)
                      .  ..++.+|+++.++|++ |.+   +++++|+++|++||+|||+|++++. ...        ..+. ..... ...+.+
T Consensus       180 ~--~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~  257 (467)
T 2oqx_A          180 G--PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYA  257 (467)
T ss_dssp             C--GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGC
T ss_pred             C--CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccC
Confidence            1  0123468888888887 665   5689999999999999999987755 221        1111 11111 001347


Q ss_pred             ceeEecccccccCCCcceEEEEeCc---hhHHHhhcCCccCC--CCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh
Q 010842          306 DSFSFSPHKWLLSYLDCCCLWVKQP---GLLVKALSTDPEYL--KNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY  380 (499)
Q Consensus       306 Dsi~~~~hK~l~~p~~~g~l~~r~~---~~l~~~~~~~~~yl--~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~  380 (499)
                      |++++++||+++.|.| |+++.+++   +.+.. +.   .+.  ....             .+.+. ..+..+ .++...
T Consensus       258 d~~~~s~sK~~g~~~G-g~~~~~~~~~~~~~~~-~~---~~~~~~~~~-------------~~~~~-~~~~~~-~al~~~  317 (467)
T 2oqx_A          258 DMLAMSAKKDAMVPMG-GLLCMKDDSFFDVYTE-CR---TLCVVQEGF-------------PTYGG-LEGGAM-ERLAVG  317 (467)
T ss_dssp             SEEEEESSSTTCCSSC-EEEEECSGGGHHHHHH-HH---HHHHHTTSS-------------CCCCC-CCHHHH-HHHHHH
T ss_pred             CeEEEecccccCCCCc-eEEEecChhHHHHHHH-HH---HhhhccCCc-------------ccccc-hhhhHH-HHHHHh
Confidence            8899999999988754 66666655   22211 11   110  0000             00000 011111 122211


Q ss_pred             cHHHH-HHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecC--CCCCCcchhHHH-HHHHHHHH-HhcCCEEEE
Q 010842          381 GVLNL-QSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP--YPHSGSADTEML-NRKLLDWV-NSTGRVYLT  455 (499)
Q Consensus       381 g~~g~-~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~--~~~~~~~~~~~~-~~~l~~~l-~~~g~~~~~  455 (499)
                      -.+.+ ++.+++..++++++.+.|++. ++++. +.....+.+.+..  .. .+.   ..+ ..++.++| .+.|+.+..
T Consensus       318 l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~~~~-~~~---~~~~~~~l~~~L~~~~gv~~~~  391 (467)
T 2oqx_A          318 LYDGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ-QAGGHAAFVDAGKLLPH-IPA---DQFPAQALACELYKVAGIRAVE  391 (467)
T ss_dssp             HHHTTCHHHHHHHHHHHHHHHHHHHHT-TCCEE-EECSSCEEEEHHHHSTT-SCG---GGCHHHHHHHHHHHHHCEECEE
T ss_pred             hHhhhhHHHHHHHHHHHHHHHHHHHHC-CCeee-cCCceEEEEechhhccc-CCc---ccccHHHHHHHHHHhcCceecc
Confidence            01222 235566678889999999887 77776 5455566666631  11 011   122 45667777 677865443


Q ss_pred             eeeE-------------CCEEEEEEeccCCC-CcHHHHHHHHHHHHHHHHHHh
Q 010842          456 HTIV-------------GGLYMLRFAVGASL-TDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       456 ~~~~-------------~g~~~lRi~~~~~~-~t~~di~~l~~~l~~~~~~l~  494 (499)
                      ...+             .+..++|+++. .. +|++||++++++|+++.+++.
T Consensus       392 ~~~~~~~~~~~~g~~~~~~~~~iRl~~~-~~~~t~e~i~~~~~~l~~~l~~~~  443 (467)
T 2oqx_A          392 IGSFLLGRDPKTGKQLPCPAELLRLTIP-RATYTQTHMDFIIEAFKHVKENAA  443 (467)
T ss_dssp             ESHHHHCBCTTTCSBCCCSCCEEEECCC-TTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred             cccccccccccccccccCccCeEEEEec-CCCCCHHHHHHHHHHHHHHHhhhh
Confidence            2211             02368999985 66 899999999999999887643

>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*

Probab=99.86  E-value=1e-20  Score=191.48  Aligned_cols=358  Identities=11%  Similarity=0.035  Sum_probs=214.8

Q ss_pred             HHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHH-Hccc-CCcccccChhhHHHHHHHHHHHHHHcCC---
Q 010842           70 ETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCA-CFNS-VGFNWLASPASTELEIVVMDWLATMLKL---  144 (499)
Q Consensus        70 ~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~-~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~---  144 (499)
                      -.+.+.+.+.-.++........|+..-...+.++ .+.+.+.. .+.. ....|...++..++.+++.+|+.+..+.   
T Consensus        14 ~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~-~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~   92 (397)
T 3fsl_A           14 LTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQ-AVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLK   92 (397)
T ss_dssp             HHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCH-HHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH
T ss_pred             hhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcH-HHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCccccc
Confidence            3444445444334444443333333222222224 44555555 5544 3345666667788999887777655442   


Q ss_pred             CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCC
Q 010842          145 PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDA  224 (499)
Q Consensus       145 ~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~  224 (499)
                      ++..      ..++|+|||+|+..++......  .       ++..|+++..+|.++...++..|.   +++.+|+..+.
T Consensus        93 ~~~~------~i~~t~g~~~a~~~~~~~~~~~--~-------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~  154 (397)
T 3fsl_A           93 QQRV------ATIQTLGGSGALKVGADFLKRY--F-------PESGVWVSDPTWENHVAIFAGAGF---EVSTYPWYDEA  154 (397)
T ss_dssp             TTCE------EEEEESHHHHHHHHHHHHHHHH--C-------TTCCEEEESSCCHHHHHHHHHTTC---CEEEECCEETT
T ss_pred             ccce------EEEEcCCcHHHHHHHHHHHHhc--C-------CCCeEEEeCCCchhHHHHHHHcCC---ceEEEeeeecc
Confidence            2300      2589999999998886433211  0       456788899999999999999999   99999984323


Q ss_pred             CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccC-ccchhh--
Q 010842          225 NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACIC-PEFRHY--  298 (499)
Q Consensus       225 ~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~-~~~~~~--  298 (499)
                      ++.+|+++|++++++.   .....+++.+.++|+||.+   +++++|+++|++||+++++|++|+.+.... ......  
T Consensus       155 ~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~  231 (397)
T 3fsl_A          155 TNGVRFNDLLATLKTL---QAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRA  231 (397)
T ss_dssp             TTEECHHHHHHHHTTC---CTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHH
T ss_pred             CCcCcHHHHHHHHHhC---CCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHH
Confidence            4799999999998742   1224578888999999999   566799999999999999999998765421 111111  


Q ss_pred             hcCCCCCceeEecccccccCC-CcceEEEE--eCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHH
Q 010842          299 LNGIERVDSFSFSPHKWLLSY-LDCCCLWV--KQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM  375 (499)
Q Consensus       299 ~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~--r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~  375 (499)
                      +.+...-..+..+.+|.++.| ..+|++++  .++..+.+.......+.....              ..   ...+...+
T Consensus       232 ~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~---~~~~~~~~  294 (397)
T 3fsl_A          232 IASAGLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNY--------------SS---PPNFGAQV  294 (397)
T ss_dssp             HHHTTCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTT--------------SS---CCSHHHHH
T ss_pred             HHhcCCCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhcc--------------CC---CCHHHHHH
Confidence            112223456777889999844 45788875  343333222111000000000              00   01222222


Q ss_pred             HHHHhc--------HHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHH
Q 010842          376 VLRSYG--------VLNLQSHIRSDIRLAKMFEGFVKSDP---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLD  444 (499)
Q Consensus       376 ~l~~~g--------~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~  444 (499)
                      +...+.        .+.++++.++..++++++.+.|++.+   ++++.. |..+.+.|.  ...          .+.+.+
T Consensus       295 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~--~~~----------~~~~~~  361 (397)
T 3fsl_A          295 VAAVLNDEALKASWLKEVEEMRTRILAMRQELVKVLSTEMPERNFDYLL-NQRGMFSYT--GLS----------AAQVDR  361 (397)
T ss_dssp             HHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCTHHH-HCCSSEEEC--CCC----------HHHHHH
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeec-CCceEEEec--CCC----------HHHHHH
Confidence            222221        45577788888899999999998864   565442 333333331  111          233555


Q ss_pred             HHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          445 WVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       445 ~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      .+.+.|+. +.+.   +    |++++ . .++++|++++++|+++
T Consensus       362 ~l~~~gi~-v~~g---~----Ris~~-~-~~~~~i~~~~~~l~~~  396 (397)
T 3fsl_A          362 LREEFGVY-LIAS---G----RMCVA-G-LNTANVQRVAKAFAAV  396 (397)
T ss_dssp             HHHTTCEE-CCTT---C----EEEGG-G-CCTTTHHHHHHHHHHH
T ss_pred             HHHhCCEE-ECCC---C----eEEEE-e-cCHhhHHHHHHHHHhh
Confidence            56666743 3332   1    99885 2 3557799999999875

>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}

Probab=99.86  E-value=2.2e-20  Score=191.98  Aligned_cols=322  Identities=12%  Similarity=0.088  Sum_probs=198.3

Q ss_pred             cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCe---------
Q 010842          119 FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKL---------  189 (499)
Q Consensus       119 ~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~---------  189 (499)
                      ..|....+..++++++.+|+.+.+|.+...     ...++|+|||+|+..++.+...           ++.         
T Consensus        77 ~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~-----~~i~~t~G~t~al~~~~~~l~~-----------~gd~~~~~~~~~  140 (444)
T 3if2_A           77 ANYSNPQGDSAFIDALVGFFNRHYDWNLTS-----ENIALTNGSQNAFFYLFNLFGG-----------AFVNEHSQDKES  140 (444)
T ss_dssp             HSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHSSE-----------EEECC-------
T ss_pred             hccCCCCCCHHHHHHHHHHHHhhcCCCCCH-----HHEEEecCcHHHHHHHHHHHhC-----------CCcccccccccc
Confidence            346666677899999999999888864321     2579999999999988876532           122         


Q ss_pred             -----EEEcC-CCCchhHHHHH------HHhCCCCCCeEEeeCCC-CC--CCccCHHHHHHHHHHHHHcCCccEEEEEec
Q 010842          190 -----VVYGS-DQTHSTFAKVC------KLAGVSPANIRALPTSV-DA--NFSLSPQLLRRAVEADVEAGLVPLFLCATV  254 (499)
Q Consensus       190 -----~i~~s-~~~H~s~~ka~------~~~G~g~~~v~~v~~~~-~~--~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~  254 (499)
                           .|+++ ..+|..+..++      ...|.   .++.+|++. ++  +|.+|+++|++++...+   ..+.+|+++.
T Consensus       141 ~g~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~---~~~~~v~i~~  214 (444)
T 3if2_A          141 KSVDKSILLPLTPEYIGYSDVHVEGQHFAAVLP---HIDEVTHDGEEGFFKYRVDFEALENLPALKE---GRIGAICCSR  214 (444)
T ss_dssp             CEEEEEEEESSSSCCGGGTTCCSSSCCEEECCC---EEEEEEETTEEEEEEEECCHHHHHTCHHHHT---TCEEEEEEES
T ss_pred             ccccceEEEeCCCCccchhhcccccchhhccCc---eEEecccccccCccccCCCHHHHHHHHHhcC---CCceEEEeCC
Confidence                 45544 66777666533      22344   677788764 22  36899999999864321   1345788888


Q ss_pred             CCCcccccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCch
Q 010842          255 GTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPG  331 (499)
Q Consensus       255 gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~  331 (499)
                      ++|++|.+-|   +++|+++|++||+++|+|++|+.+.... .+..........+.++.++||++....++|+++.+.+ 
T Consensus       215 p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~-  292 (444)
T 3if2_A          215 PTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNI-IYSDAHLNWDNNTILCFSLSKIGLPGMRTGIIVADAK-  292 (444)
T ss_dssp             SCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCCCCCCTTEEEEEESTTTTCGGGCCEEEECCHH-
T ss_pred             CCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCccccc-ccccccccCCCCEEEEechhhccCCCCceEEEEECHH-
Confidence            9999999988   8899999999999999999997532111 1111111223467888999998555567787766432 


Q ss_pred             hHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHH----HHH-HHHHHHHHHHHHHHHHhc-
Q 010842          332 LLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLN----LQS-HIRSDIRLAKMFEGFVKS-  405 (499)
Q Consensus       332 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g----~~~-~~~~~~~~a~~l~~~L~~-  405 (499)
                       +...+.......                    +.....+...++...+....    ..+ +.++..++.+++.+.|.+ 
T Consensus       293 -l~~~~~~~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  351 (444)
T 3if2_A          293 -VIEAVSAMNAVV--------------------NLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQA  351 (444)
T ss_dssp             -HHHHHHHHHHHH--------------------HSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHhc--------------------cCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence             222221100000                    00112233333333322111    122 334445555666666654 


Q ss_pred             CC--CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC----------CEEEEEEeccCCC
Q 010842          406 DP--RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG----------GLYMLRFAVGASL  473 (499)
Q Consensus       406 ~~--~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----------g~~~lRi~~~~~~  473 (499)
                      ++  ++++..+.....+++.+....        ....++.+.|.++|+.+..+..+.          +..++|++++ . 
T Consensus       352 l~~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~-~-  421 (444)
T 3if2_A          352 LGDYPLMIHKPEGAIFLWLWFKDLP--------ISTLDLYERLKAKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIA-A-  421 (444)
T ss_dssp             SSSSSEEEECCCBSSEEEEEETTCS--------SCHHHHHHHHHHTTEECEEGGGSCTTCCCTTCSGGGSEEEEESS-S-
T ss_pred             cccCCceEecCCccEEEEEEcCCCC--------CCHHHHHHHHHHCCeEEecchhhcCCCCCcccccCCCeEEEEEe-C-
Confidence            44  466664544555666665311        014567777877886554433321          1258999996 3 


Q ss_pred             CcHHHHHHHHHHHHHHHHHHhcc
Q 010842          474 TDERHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       474 ~t~~di~~l~~~l~~~~~~l~~~  496 (499)
                       ++++|++++++|.++.+++..+
T Consensus       422 -~~e~i~~~l~~l~~~~~~~~~~  443 (444)
T 3if2_A          422 -DEQTLIDGIKVIGEVVRELYDN  443 (444)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHTC
T ss_pred             -CHHHHHHHHHHHHHHHHHHHcc
Confidence             8999999999999999887653

>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*

Probab=99.86  E-value=9.4e-20  Score=186.34  Aligned_cols=324  Identities=13%  Similarity=0.068  Sum_probs=207.6

Q ss_pred             cccChhhHHHHHHHHHHHHHHcCCCCcccc--CCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842          121 WLASPASTELEIVVMDWLATMLKLPKTFMF--SGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH  198 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~--~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H  198 (499)
                      |....+..++.+++.+|+.+.+|.+.....  .+....++|+|+++|+..++.+..+           ++..|++..++|
T Consensus        74 Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~-----------~gd~Vlv~~p~y  142 (425)
T 2r2n_A           74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIIN-----------PGDNVLLDEPAY  142 (425)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSCC
T ss_pred             CCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCC-----------CCCEEEEeCCCc
Confidence            444556678999999999999998641000  0001468999999999888877632           466788899999


Q ss_pred             hhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH------HcCCccEEEEE-ecCCCcccccCChh---HH
Q 010842          199 STFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV------EAGLVPLFLCA-TVGTTSTTAVDNVE---PL  268 (499)
Q Consensus       199 ~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~------~~g~~p~~vv~-t~gtt~~G~id~l~---~I  268 (499)
                      ..+...++..|.   +++.||++++   .+|+++|++++++..      ..+..+.+|++ ..++|+||.+-+.+   +|
T Consensus       143 ~~~~~~~~~~g~---~~~~v~~~~~---~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l  216 (425)
T 2r2n_A          143 SGTLQSLHPLGC---NIINVASDES---GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEI  216 (425)
T ss_dssp             HHHHHHHGGGTC---EEEEECEETT---EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHH
T ss_pred             HHHHHHHHHcCC---EEEEeCcCCC---CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHH
Confidence            999999999999   9999998753   599999999986310      00112335544 67899999997755   99


Q ss_pred             HHHHHHhCCEEEeeccccchhccCccchhhhc-CCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCC
Q 010842          269 AEVANEYGIWVHVDAAYAGSACICPEFRHYLN-GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNK  347 (499)
Q Consensus       269 ~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~-g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~  347 (499)
                      +++|++||+++++|++|+.+.+.......... +....+.+..+.+|+++....+|+++.+++  +.+.+........  
T Consensus       217 ~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~~GlRiG~~~~~~~--l~~~l~~~~~~~~--  292 (425)
T 2r2n_A          217 YELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIISSGLRIGFLTGPKP--LIERVILHIQVST--  292 (425)
T ss_dssp             HHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTCSTTCCEEEEEEHH--HHHHHHHHHHTTT--
T ss_pred             HHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhccCccceEEEecCHH--HHHHHHHHHHHhc--
Confidence            99999999999999999865432111111110 111245777899999973344799888753  2222211000000  


Q ss_pred             CCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---cH----HHHHHHHHHHHHHHHHHHHHHhc-CCCeE-EEcCCCce
Q 010842          348 PSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---GV----LNLQSHIRSDIRLAKMFEGFVKS-DPRFE-IVVPRHFA  418 (499)
Q Consensus       348 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~----~g~~~~~~~~~~~a~~l~~~L~~-~~~~~-~~~~~~~~  418 (499)
                                        .....+..+++...+   +.    +.++++.++..++++++.+.|++ .|++. +..+....
T Consensus       293 ------------------~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~  354 (425)
T 2r2n_A          293 ------------------LHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGM  354 (425)
T ss_dssp             ------------------CSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSS
T ss_pred             ------------------CCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceE
Confidence                              001223333333333   22    33555666777888889899987 67774 44344445


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-----CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-----GLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .+++.+....  +   .   .+.+.+.+.++|+.+..+..+.     +..++|++++ . .++++|++++++|.++.++.
T Consensus       355 ~~~~~~~~~~--~---~---~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~-~-~~~~~i~~~~~~l~~~l~~~  424 (425)
T 2r2n_A          355 FLWIKVKGIN--D---V---KELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS-S-ASPEQMDVAFQVLAQLIKES  424 (425)
T ss_dssp             EEEEEETTCS--C---C---HHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEECS-S-CCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCC--C---H---HHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEEeC-C-CCHHHHHHHHHHHHHHHHHh
Confidence            5666664321  0   0   1224566667786554443332     2468999985 3 58999999999999987654

>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3

Probab=99.86  E-value=1e-20  Score=186.65  Aligned_cols=277  Identities=14%  Similarity=0.137  Sum_probs=183.3

Q ss_pred             HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH----HHhC
Q 010842          134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC----KLAG  209 (499)
Q Consensus       134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~----~~~G  209 (499)
                      +.+.+++++|.+..         +++++||+|+..++.+...           ++..|+++..+|.++...+    +..|
T Consensus         3 l~~~la~~~g~~~~---------i~~~sG~~a~~~~~~~~~~-----------~g~~v~~~~~~~~~~~~~~~~~~~~~g   62 (331)
T 1pff_A            3 LEGKIAKLEHAEAC---------AATASGMGAIAASVWTFLK-----------AGDHLISDDCLYGCTHALFEHQLRKFG   62 (331)
T ss_dssp             HHHHHHHHHTCSEE---------EEESSHHHHHHHHHHHHCC-----------TTCEEEEESCCCHHHHHHHHTHHHHTT
T ss_pred             HHHHHHHHhCCCeE---------EEeCChHHHHHHHHHHhcC-----------CCCEEEEcCCCcchHHHHHHHHHHhcC
Confidence            34558899998733         7777789999888876521           4567888999999987765    4578


Q ss_pred             CCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH-hCCEEEeeccccch
Q 010842          210 VSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE-YGIWVHVDAAYAGS  288 (499)
Q Consensus       210 ~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~-~~~~lhvD~A~g~~  288 (499)
                      +   +++.+|.       +|+++|+++++++      +.+|+++.++|++|.+.|+++|.++|++ +|+++++|++|+.+
T Consensus        63 ~---~~~~~~~-------~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~  126 (331)
T 1pff_A           63 V---EVDFIDM-------AVPGNIEKHLKPN------TRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASP  126 (331)
T ss_dssp             C---EEEEECT-------TSTTHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHH
T ss_pred             C---EEEEeCC-------CCHHHHHHhhcCC------CeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCccc
Confidence            8   8888875       3778888887643      4478889999999999999999999999 99999999999876


Q ss_pred             hccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCCcccCCC
Q 010842          289 ACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKDWQVGTG  365 (499)
Q Consensus       289 ~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~s  365 (499)
                      ....+.    .   ..+|.+++++||+++.|.+  +|+++.++++.. +.+.. ...|.                    +
T Consensus       127 ~~~~~~----~---~~~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~-~~l~~~~~~~~--------------------~  178 (331)
T 1pff_A          127 ILTNPL----D---LGVDIVVHSATKYINGHTDVVAGLVCSRADIIA-KVKSQGIKDIT--------------------G  178 (331)
T ss_dssp             HHCCGG----G---GTCSEEEEETTTTTSSSSSCCCEEEEECHHHHH-HHHHTCCCCCC--------------------C
T ss_pred             ccCChh----h---cCCcEEEEECccccCCCCCceEEEEEeCcHHHH-HHHHHHHHhhc--------------------C
Confidence            543221    1   1389999999999998876  788887763333 22221 11100                    0


Q ss_pred             CCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC--------------CeEEEcC---CCceEEEEEecCCC
Q 010842          366 RRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP--------------RFEIVVP---RHFALVCFRLNPYP  428 (499)
Q Consensus       366 r~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~--------------~~~~~~~---~~~~~v~f~~~~~~  428 (499)
                      .....+..|..+..+  +.+..+.++..++++.+.+.+++.+              ++++..+   ...++++|.+.+  
T Consensus       179 ~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--  254 (331)
T 1pff_A          179 AIISPHDAWLITRGT--LTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVDG--  254 (331)
T ss_dssp             CCCCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECSS--
T ss_pred             CCCCHHHHHHHHcCc--chHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC--
Confidence            011234445443333  3344445555556666666655433              2322211   135677887652  


Q ss_pred             CCCcchhHHHHHHHHHHHHhcCCEEEEee------------------------eECC--EEEEEEeccCCCCcHHHHHHH
Q 010842          429 HSGSADTEMLNRKLLDWVNSTGRVYLTHT------------------------IVGG--LYMLRFAVGASLTDERHVVAA  482 (499)
Q Consensus       429 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~------------------------~~~g--~~~lRi~~~~~~~t~~di~~l  482 (499)
                                ...+.+.+.+.|+......                        ...|  ..++|+++. ..+++++|+.+
T Consensus       255 ----------~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~-~~~t~~~i~~l  323 (331)
T 1pff_A          255 ----------LEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVG-CENVQDIIDDL  323 (331)
T ss_dssp             ----------HHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECC-SSCHHHHHHHH
T ss_pred             ----------HHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEe-cCCHHHHHHHH
Confidence                      2345666667776332210                        0011  368999995 78999999999


Q ss_pred             HHHHHHH
Q 010842          483 WELIMEG  489 (499)
Q Consensus       483 ~~~l~~~  489 (499)
                      +++|+++
T Consensus       324 ~~~l~~~  330 (331)
T 1pff_A          324 KQALDLV  330 (331)
T ss_dssp             HHHHHTC
T ss_pred             HHHHHHh
Confidence            9998753

>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*

Probab=99.85  E-value=1e-19  Score=184.10  Aligned_cols=293  Identities=13%  Similarity=0.068  Sum_probs=183.3

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      ....++.+++++++|.+.+       ..++|+|||+|+..++.+++... +       ++.+|+.+...|.++..++...
T Consensus        87 ~~~~~l~~~la~~~~~~~~-------~v~~~~gg~~a~~~al~~~~~~~-~-------~~~vi~~~~~y~~~~~~~~~~~  151 (395)
T 1vef_A           87 PMRGEFYRTLTAILPPELN-------RVFPVNSGTEANEAALKFARAHT-G-------RKKFVAAMRGFSGRTMGSLSVT  151 (395)
T ss_dssp             HHHHHHHHHHHHTSCTTEE-------EEEEESSHHHHHHHHHHHHHHHH-S-------CCEEEEETTCCCCSSHHHHHTC
T ss_pred             HHHHHHHHHHHHhcCCCcC-------EEEEcCcHHHHHHHHHHHHHHHh-C-------CCeEEEEcCCcCCCchhhhhhc
Confidence            4555666779999876543       46999999999999998765321 0       2334444444466676677776


Q ss_pred             CCCCCCeE---EeeCCCCCC-C-ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEE
Q 010842          209 GVSPANIR---ALPTSVDAN-F-SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWV  279 (499)
Q Consensus       209 G~g~~~v~---~v~~~~~~~-~-~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~l  279 (499)
                      |.   .++   .+|+..+-. . ..|+++|+++|+++      +.+|+++..++++|.+.|    +++|+++|++||+++
T Consensus       152 g~---~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~l  222 (395)
T 1vef_A          152 WE---PKYREPFLPLVEPVEFIPYNDVEALKRAVDEE------TAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALL  222 (395)
T ss_dssp             CC---HHHHGGGCSCSSCEEEECTTCHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEE
T ss_pred             CC---cccccccCCCCCCeeEeCCCcHHHHHHHhccC------EEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEE
Confidence            66   321   112211100 0 25899999988642      446777777788999877    999999999999999


Q ss_pred             EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842          280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD  359 (499)
Q Consensus       280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  359 (499)
                      |+|++|+++............++ ..|++++  ||+++.+.++|+++++++  +.+.+... .+                
T Consensus       223 i~Dea~~~~~~~g~~~~~~~~~~-~~d~~s~--sK~~~~g~~~G~~~~~~~--~~~~l~~~-~~----------------  280 (395)
T 1vef_A          223 ILDEIQTGMGRTGKRFAFEHFGI-VPDILTL--AKALGGGVPLGVAVMREE--VARSMPKG-GH----------------  280 (395)
T ss_dssp             EEECTTTTTTTTSSSSTHHHHTC-CCSEEEE--CGGGGTTSSCEEEEEEHH--HHHTSCTT-SS----------------
T ss_pred             EEEecccCCccCCchhHhhhcCC-CCCEEEE--cccccCCCceEEEEehHH--HHhhhccC-Cc----------------
Confidence            99999986422111111111222 3687754  999998888999998764  32322210 00                


Q ss_pred             cccCCCCCCCcHHH---HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC--eEEEcCCCceEEEEEecCCCCCCcch
Q 010842          360 WQVGTGRRFKSLRL---WMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR--FEIVVPRHFALVCFRLNPYPHSGSAD  434 (499)
Q Consensus       360 ~~~~~sr~~~al~~---~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~--~~~~~~~~~~~v~f~~~~~~~~~~~~  434 (499)
                         ..+.....+..   ..+++.+..   +++.++..++++++.+.|++++.  +... ++..+++++.+...       
T Consensus       281 ---~~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-~~~g~~~~~~~~~~-------  346 (395)
T 1vef_A          281 ---GTTFGGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPSPKIREV-RGMGLMVGLELKEK-------  346 (395)
T ss_dssp             ---CCSSTTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCCTTEEEE-EEETTEEEEEESSC-------
T ss_pred             ---CCCcCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhcCceEEE-EEEEEEEEEEEcCh-------
Confidence               00111123333   333443322   34677888899999999988743  2111 23445677776432       


Q ss_pred             hHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          435 TEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       435 ~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                          ..++.+.|. ++|+.+ .+.   +..++|+++. ..++++|+++++++|+++.
T Consensus       347 ----~~~l~~~l~~~~gi~v-~~~---~~~~iRi~~~-~~~~~~~i~~~~~~l~~~l  394 (395)
T 1vef_A          347 ----AAPYIARLEKEHRVLA-LQA---GPTVIRFLPP-LVIEKEDLERVVEAVRAVL  394 (395)
T ss_dssp             ----SHHHHHHHHHHHCEEC-EES---STTEEEECCC-TTCCHHHHHHHHHHHHHHH
T ss_pred             ----HHHHHHHHHHHCCeEE-ecC---CCCEEEEeCC-CCCCHHHHHHHHHHHHHHh
Confidence                245667777 678543 332   3467999984 7789999999999998764

>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*

Probab=99.76  E-value=3.9e-23  Score=209.16  Aligned_cols=327  Identities=12%  Similarity=0.093  Sum_probs=211.9

Q ss_pred             HHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc
Q 010842          106 LGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN  185 (499)
Q Consensus       106 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g  185 (499)
                      +.+.+...+......|...  ..++++++.+|+.+.+|.+...     ...++|+||++|+..++.+..+          
T Consensus        49 v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~-----~~v~~~~g~~~a~~~~~~~~~~----------  111 (392)
T 3b1d_A           49 VKQAIHDYAEQLVYGYTYA--SDELLQAVLDWEKSEHQYSFDK-----EDIVFVEGVVPAISIAIQAFTK----------  111 (392)
Confidence            4444444443323334332  6789999999999888843211     1358999999999888877643          


Q ss_pred             cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCC-CCCCCccCHHHHHHHHHH-HHHcCCccEEEEEecCCCcccccC
Q 010842          186 MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTS-VDANFSLSPQLLRRAVEA-DVEAGLVPLFLCATVGTTSTTAVD  263 (499)
Q Consensus       186 ~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~-~~~~~~~d~~~L~~~i~~-~~~~g~~p~~vv~t~gtt~~G~id  263 (499)
                       ++..|+++..+|.++..+++..|.   +++.+|.+ .+++|.+|+++|++++++ ++      .+|+++.++|++|.+-
T Consensus       112 -~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~------~~v~~~~~~nptG~~~  181 (392)
T 3b1d_A          112 -EGEAVLINSPVYPPFARSVRLNNR---KLVSNSLKEENGLFQIDFEQLENDIVENDV------KLYLLCNPHNPGGRVW  181 (392)
Confidence             345688899999999999999999   99999985 334578999999999873 33      2566788999999985


Q ss_pred             C---hhHHHHHHHHhCCEEEeeccccchhccCccchhhh---cCCCCCceeEeccccccc-CCCcceEEEEeCchhHHHh
Q 010842          264 N---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL---NGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGLLVKA  336 (499)
Q Consensus       264 ~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~---~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~l~~~  336 (499)
                      +   +++|+++|++||+++++|++|+.+...........   ......+.++.+.+|+++ ....+|+++.+++... +.
T Consensus       182 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~-~~  260 (392)
T 3b1d_A          182 EREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENPTLC-AQ  260 (392)
Confidence            4   99999999999999999999987653221111111   111124567788999997 4456888887654322 22


Q ss_pred             hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEc
Q 010842          337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEIVV  413 (499)
Q Consensus       337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~  413 (499)
                      +.......                +....   ..+..+++...+  +.+.+++..++..++++++.+.|++ +|++++..
T Consensus       261 ~~~~~~~~----------------~~~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  321 (392)
T 3b1d_A          261 FKHQQLVN----------------NHHEV---SSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQEAPRLKVMK  321 (392)
Confidence            21110000                00000   112222222222  3456777778888889999999987 78887653


Q ss_pred             CCCceEEE-EEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          414 PRHFALVC-FRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       414 ~~~~~~v~-f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                       +..+.+. +.+....        ....++.++|. +.|+.+..+..+.  +..++|++++   .++++|++++++|.++
T Consensus       322 -~~~~~~~~i~~~~~~--------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~---~~~e~i~~~l~~l~~~  389 (392)
T 3b1d_A          322 -PQGTYLIWLDFSDYG--------LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIA---APKSLVEEICKRIVCC  389 (392)
Confidence             4444443 4443210        11345677775 5676554433332  4578999986   3578999999999876


Q ss_pred             HH
Q 010842          490 AD  491 (499)
Q Consensus       490 ~~  491 (499)
                      .+
T Consensus       390 l~  391 (392)
T 3b1d_A          390 LP  391 (392)
Confidence            54

>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*

Probab=99.85  E-value=1.1e-19  Score=183.55  Aligned_cols=217  Identities=12%  Similarity=0.139  Sum_probs=156.4

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK  203 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k  203 (499)
                      .|...++|    +++++++|.+.         .+++++||+|+..++.+...           ++..|+++...|.+...
T Consensus        58 ~~~~~~l~----~~la~~~g~~~---------~i~~~sG~~ai~~~~~~~~~-----------~gd~vl~~~~~y~~~~~  113 (389)
T 3acz_A           58 NPTVEQFE----EMVCSIEGAAG---------SAAFGSGMGAISSSTLAFLQ-----------KGDHLIAGDTLYGCTVS  113 (389)
T ss_dssp             CHHHHHHH----HHHHHHHTCSE---------EEEESSHHHHHHHHHTTTCC-----------TTCEEEEESSCCHHHHH
T ss_pred             ChHHHHHH----HHHHHHhCCCe---------EEEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHHH
Confidence            44444444    45888888863         37888899999888776521           45678889999998766


Q ss_pred             H----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEE
Q 010842          204 V----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWV  279 (499)
Q Consensus       204 a----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~l  279 (499)
                      .    ++..|+   +++.+|.       .|+++|+++|+++      +.+|++..++|++|.+.|+++|+++|+++|+++
T Consensus       114 ~~~~~~~~~g~---~~~~v~~-------~d~~~l~~~i~~~------~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~l  177 (389)
T 3acz_A          114 LFTHWLPRFGI---EVDLIDT-------SDVEKVKAAWKPN------TKMVYLESPANPTCKVSDIKGIAVVCHERGARL  177 (389)
T ss_dssp             HHHHHHHHTTC---EEEEECT-------TCHHHHHHTCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEE
T ss_pred             HHHHHHHHcCC---EEEEECC-------CCHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCEE
Confidence            5    577888   8888875       3889999988653      347888999999999999999999999999999


Q ss_pred             EeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC
Q 010842          280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF  357 (499)
Q Consensus       280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~  357 (499)
                      ++|++|+.+....+    ..   ..+|.++.+.||+++.|.+  +|+++.++++.. +.+.....+.             
T Consensus       178 ivD~~~~~~~~~~~----~~---~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~-~~l~~~~~~~-------------  236 (389)
T 3acz_A          178 VVDATFTSPCFLKP----LE---LGADIALHSVSKYINGHGDVIGGVSSAKTAEDI-ATIKFYRKDA-------------  236 (389)
T ss_dssp             EEECTTTCTTTCCG----GG---TTCSEEEEETTTTTTCSSCCCCEEEEESSHHHH-HHHHHHHHHH-------------
T ss_pred             EEECCCccccccCc----cc---cCCeEEEECChhhccCCCCceeEEEEECcHHHH-HHHHHHHHhc-------------
Confidence            99999987643221    11   1489999999999999877  688888762322 2111100000             


Q ss_pred             CCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010842          358 KDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFE  410 (499)
Q Consensus       358 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~  410 (499)
                             +........|+.++.+  +.+..++++..++++.+.+.|++.+.++
T Consensus       237 -------g~~~~~~~~~~~~~~l--~~l~~r~~~~~~~~~~l~~~l~~~~~v~  280 (389)
T 3acz_A          237 -------GSLMAPMDAFLCARGM--KTLPIRMQIHMENGLKVAKFLEQHEKIV  280 (389)
T ss_dssp             -------CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHHCTTEE
T ss_pred             -------CCCCCHHHHHHHHcCc--cHHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence                   0011345667666655  4566677888888899999998876654

>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*

Probab=99.84  E-value=2.3e-19  Score=183.74  Aligned_cols=308  Identities=12%  Similarity=0.043  Sum_probs=201.4

Q ss_pred             ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842          120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS  199 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~  199 (499)
                      .|...++..++++++.+|+.+.++.+.+       ..++|+|+++++.. +....+           ++..|+++...|.
T Consensus        93 ~y~~~~g~~~l~~~ia~~~~~~~~~~~~-------~i~~t~G~~~al~~-l~~l~~-----------~gd~Vl~~~p~y~  153 (432)
T 3ei9_A           93 GYGAEQGAKPLRAAIAKTFYGGLGIGDD-------DVFVSDGAKCDISR-LQVMFG-----------SNVTIAVQDPSYP  153 (432)
T ss_dssp             CCCCTTCCHHHHHHHHHHHHTTTTCCGG-------GEEEESCHHHHHHH-HHHHHC-----------TTCCEEEEESCCT
T ss_pred             CCCCCCCCHHHHHHHHHHHHccCCCCcc-------eEEECCChHHHHHH-HHHHcC-----------CCCEEEEeCCCCH
Confidence            4555566789999988888865555543       46899999887654 332211           4667888999999


Q ss_pred             hHHHHHHHhCCCC---------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC---ChhH
Q 010842          200 TFAKVCKLAGVSP---------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD---NVEP  267 (499)
Q Consensus       200 s~~ka~~~~G~g~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id---~l~~  267 (499)
                      ++..+++..|...         .+++.+|++.++++..|++.           ...+.+|+++.++|+||.+-   ++++
T Consensus       154 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------~~~~~~v~l~~p~NPtG~~~~~~~l~~  222 (432)
T 3ei9_A          154 AYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST-----------VGRTDIIFFCSPNNPTGAAATREQLTQ  222 (432)
T ss_dssp             HHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG-----------CCCCSEEEEESSCTTTCCCCCHHHHHH
T ss_pred             HHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh-----------CCCCCEEEEeCCCCCCCCCCCHHHHHH
Confidence            9999999888411         16888998765445555432           11234677789999999985   4677


Q ss_pred             HHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEeccccccc-CCCcceEEEEeCchh------HHHhhc
Q 010842          268 LAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLL-SYLDCCCLWVKQPGL------LVKALS  338 (499)
Q Consensus       268 I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~r~~~~------l~~~~~  338 (499)
                      |+++|++||+++++|++|+.+.... .....  ..+....+.++.+++|+++ ....+|+++.++...      +...+.
T Consensus       223 l~~la~~~~~~li~Dea~~~~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~  301 (432)
T 3ei9_A          223 LVEFAKKNGSIIVYDSAYAMYMSDD-NPRSIFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFN  301 (432)
T ss_dssp             HHHHHHHHTCEEEEECTTGGGCCSS-CCSSGGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHH
T ss_pred             HHHHHHHcCcEEEEccchHhhccCC-CCCChhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHH
Confidence            7888999999999999998764321 11111  1122235678899999997 445689888776431      011111


Q ss_pred             CCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC
Q 010842          339 TDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR  415 (499)
Q Consensus       339 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~  415 (499)
                      ....+..                    .....+...+++..+   +.+.++++.++..++++++.+.|++. ++++..+.
T Consensus       302 ~~~~~~~--------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~  360 (432)
T 3ei9_A          302 RIICTCF--------------------NGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL-GYDVYGGK  360 (432)
T ss_dssp             HHHHHSC--------------------CCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCEEECS
T ss_pred             HHhcccc--------------------CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC-CceecCCC
Confidence            0000000                    011234444444444   33567788888999999999999988 88877555


Q ss_pred             CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       416 ~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      ....+.+.+....          ..++.+++.++ |+.+..+..+.  +..++|+++.   +++++|+++++.|++....
T Consensus       361 ~~~~~~~~~~~~~----------~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis~~---~~~e~l~~~l~rl~~~~~~  427 (432)
T 3ei9_A          361 NAPYVWVHFPNQS----------SWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVSAF---GHRENILEACRRFKQLYKH  427 (432)
T ss_dssp             SSSEEEEECTTSC----------HHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHHHHHTT
T ss_pred             cceEEEEECCCCC----------HHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEEec---CCHHHHHHHHHHHHHHhhh
Confidence            5566666665322          34556666554 75444433332  3578999985   5899999999999886543

>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*

Probab=99.84  E-value=1.4e-20  Score=192.08  Aligned_cols=360  Identities=11%  Similarity=-0.009  Sum_probs=216.2

Q ss_pred             HHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHccc-CCcccccChhhHHHHHHHHHHHHHHcCC---
Q 010842           69 FETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNS-VGFNWLASPASTELEIVVMDWLATMLKL---  144 (499)
Q Consensus        69 ~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~---  144 (499)
                      .-.+.+.+.+.-.++..+.....|...-...+.+ ..+.+.+...+.. ....|....+..++.+++.+++....+.   
T Consensus        36 i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~-~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~  114 (420)
T 4f4e_A           36 ILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLL-RAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIA  114 (420)
T ss_dssp             HHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCC-HHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHH
T ss_pred             HHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCc-HHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccc
Confidence            3455555554333444444333322222122222 3445555555543 3345666677788999988887655442   


Q ss_pred             CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCC
Q 010842          145 PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDA  224 (499)
Q Consensus       145 ~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~  224 (499)
                      ++.      ...++|+|||+|+..++......  .       ++..|+++.++|.++...++..|.   +++.+|+..+.
T Consensus       115 ~~~------~~i~~t~G~t~al~~~~~~~~~~--~-------~gd~Vlv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~  176 (420)
T 4f4e_A          115 AGR------VVTAQALGGTGALKIGADFLRTL--N-------PKAKVAISDPSWENHRALFDMAGF---EVVAYPYYDAK  176 (420)
T ss_dssp             TTC------EEEEEEEHHHHHHHHHHHHHHHH--C-------TTCCEEEEESCCHHHHHHHHHTTC---CEEEEECEETT
T ss_pred             cCc------eEEEECCccHHHHHHHHHHHHHh--C-------CCCEEEEeCCCcHhHHHHHHHcCC---eEEEeeeeccc
Confidence            220      03589999999998885432111  0       466788899999999999999999   99999983223


Q ss_pred             CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCc-cchh--h
Q 010842          225 NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICP-EFRH--Y  298 (499)
Q Consensus       225 ~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~-~~~~--~  298 (499)
                      ++.+|+++|++.+++.   .....+++.+.++|+||.+   +++++|+++|++||+++++|++|+++....+ ....  .
T Consensus       177 ~~~~d~~~l~~~l~~~---~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~  253 (420)
T 4f4e_A          177 TNGVNFDGMLAALNGY---EPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRL  253 (420)
T ss_dssp             TTEECHHHHHHHHTTC---CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHH
T ss_pred             cCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHH
Confidence            4799999999998632   1224578889999999999   5577999999999999999999987654321 1111  1


Q ss_pred             hcCCCCCceeEecccccccCC-CcceEEEE--eCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHH
Q 010842          299 LNGIERVDSFSFSPHKWLLSY-LDCCCLWV--KQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM  375 (499)
Q Consensus       299 ~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~--r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~  375 (499)
                      ..+....+.++.+.+|.++.| ..+|++++  .++....+.......+.....              ..   ...+..++
T Consensus       254 ~~~~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~---~~~~~~~~  316 (420)
T 4f4e_A          254 FAAANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNY--------------SN---PPTHGGAI  316 (420)
T ss_dssp             HHHTTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTT--------------SS---CCSHHHHH
T ss_pred             HHhcCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhccc--------------CC---CCHHHHHH
Confidence            112233567788999999843 55788764  333322111111000000000              00   01222232


Q ss_pred             HHHHhc--------HHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHH
Q 010842          376 VLRSYG--------VLNLQSHIRSDIRLAKMFEGFVKSD---PRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLD  444 (499)
Q Consensus       376 ~l~~~g--------~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~  444 (499)
                      +...+.        .+.++++.++..++++++.+.|+++   +++++.. |..+.+.|.  ...          .+.+.+
T Consensus       317 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~--~~~----------~~~~~~  383 (420)
T 4f4e_A          317 VAAVLASPELRASWVQELGEMRDRIRAMRNGLVERLKAAGIERDFSFIN-AQRGMFSYS--GLT----------SAQVDR  383 (420)
T ss_dssp             HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCTHHH-HSCSSEEEC--CCC----------HHHHHH
T ss_pred             HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeEC-CCccEEEEe--CCC----------HHHHHH
Confidence            222221        3446778888889999999999887   4565443 333434331  111          133445


Q ss_pred             HHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          445 WVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       445 ~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      .+.+.|+. +.+.       .|++++  ..++++|++++++|+++.
T Consensus       384 ~l~~~gI~-v~~~-------~Ris~~--~~~~~~i~~~~~~l~~~l  419 (420)
T 4f4e_A          384 LREEFGIY-AVST-------GRICVA--ALNTRNLDVVANAIAAVL  419 (420)
T ss_dssp             HHHHHCEE-CCTT-------SEEEGG--GCCTTTHHHHHHHHHHHH
T ss_pred             HHHhCCEE-ecCC-------CeEEEe--cCCHHHHHHHHHHHHHHh
Confidence            55566743 3331       399985  236677999999998864

>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}

Probab=99.84  E-value=3.2e-19  Score=177.35  Aligned_cols=280  Identities=9%  Similarity=-0.039  Sum_probs=190.4

Q ss_pred             HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCC
Q 010842          133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSP  212 (499)
Q Consensus       133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~  212 (499)
                      ++++++++++|.+.+       ..++|+|+|+|+..++.+..             +..|+++..+|.++..+++..|.  
T Consensus        54 ~lr~~la~~~~~~~~-------~i~~t~g~~~al~~~~~~l~-------------gd~Vi~~~p~~~~~~~~~~~~g~--  111 (350)
T 3fkd_A           54 TLRQMLAKRNSVDNN-------AILVTNGPTAAFYQIAQAFR-------------GSRSLIAIPSFAEYEDACRMYEH--  111 (350)
T ss_dssp             HHHHHHHHHTTCCGG-------GEEEESHHHHHHHHHHHHTT-------------TCEEEEEESCCHHHHHHHHHTTC--
T ss_pred             HHHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHHC-------------CCEEEEeCCCcHHHHHHHHHcCC--
Confidence            345568889998654       36899999999988877653             33588888999999999999999  


Q ss_pred             CCeEEeeC-CCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC-CEEEeeccccchhc
Q 010842          213 ANIRALPT-SVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG-IWVHVDAAYAGSAC  290 (499)
Q Consensus       213 ~~v~~v~~-~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~-~~lhvD~A~g~~~~  290 (499)
                       +++.+|+ ++.+  .+++        +      .+.+|+++.++|+||.+-|+++|.++++.++ .++++|++|+.+..
T Consensus       112 -~~~~v~~~~~~~--~~~~--------~------~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~li~Dea~~~~~~  174 (350)
T 3fkd_A          112 -EVCFYPSNEDIG--EADF--------S------NMDFCWLCNPNNPDGRLLQRTEILRLLNDHPDTTFVLDQSYVSFTT  174 (350)
T ss_dssp             -EEEEEETTSCGG--GSCC--------T------TCSEEEEESSCTTTCCCCCHHHHHHHHHHCTTSEEEEECTTTTSCS
T ss_pred             -eEEEEecCCccc--cCcc--------C------CCCEEEEeCCCCCcCCCCCHHHHHHHHHhCCCCEEEEECchhhhcc
Confidence             9999999 6533  3444        1      2346788999999999999999999999876 79999999976543


Q ss_pred             cCccchhhhcCCCCCceeEecccccccC-CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC
Q 010842          291 ICPEFRHYLNGIERVDSFSFSPHKWLLS-YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK  369 (499)
Q Consensus       291 ~~~~~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~  369 (499)
                      ..+.... ..+....+.++.+++|+++. ...+|+++. +++.. +.+.......                      ...
T Consensus       175 ~~~~~~~-~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~-~~~~~-~~~~~~~~~~----------------------~~~  229 (350)
T 3fkd_A          175 EEVIRPA-DIKGRKNLVMVYSFSHAYGIPGLRIGYIVA-NKDFM-KRVAAFSTPW----------------------AVN  229 (350)
T ss_dssp             SCCCCGG-GGTTCSSEEEEEESHHHHSCGGGCCEEEEC-CHHHH-HHHHTTCCTT----------------------CSC
T ss_pred             CcchhhH-HhhcCCCEEEEecCchhccCcchheEeEEe-CHHHH-HHHHHhCCCC----------------------CCC
Confidence            2211111 11122345778899999984 466888887 44433 2222111000                      112


Q ss_pred             cHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh
Q 010842          370 SLRLWMVLRSYGVLN-LQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS  448 (499)
Q Consensus       370 al~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~  448 (499)
                      .+..+++...+.... +.+.+++..++++++.+.|+++|++++. ++..+.+.+++....          ..++.++|.+
T Consensus       230 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~l~~~L~~  298 (350)
T 3fkd_A          230 ALAIEAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGVEVH-PSGTTFFLLRLKKGT----------AAELKKYMLE  298 (350)
T ss_dssp             HHHHHHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTEEEC-CCSSSEEEEEESSSC----------HHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEC-CCCCcEEEEECCCCC----------HHHHHHHHHH
Confidence            344455544442222 3334445558889999999999999875 555566667775421          4567788887


Q ss_pred             -cCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          449 -TGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       449 -~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                       .|+.+..+..+.  +..++|++++    +.+++++++++|+++.+
T Consensus       299 ~~gi~v~~g~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~~~  340 (350)
T 3fkd_A          299 EYNMLIRDASNFRGLDESYVRITTQ----RPAQNQLFIKALETFLE  340 (350)
T ss_dssp             TTCEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHHHT
T ss_pred             HCCEEEEeCccCCCCCCCEEEEEcC----CHHHHHHHHHHHHHHHH
Confidence             775544433332  2568999985    78899999999988764

>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*

Probab=99.84  E-value=5.5e-20  Score=186.86  Aligned_cols=287  Identities=11%  Similarity=0.088  Sum_probs=194.6

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|...++|++    +++++|.+..         ++++|||+|+..++.+...           ++..|+++...|.+..
T Consensus        80 ~~p~~~~le~~----lA~l~g~~~~---------i~~ssGt~Ai~~al~~l~~-----------~Gd~Vi~~~~~y~~~~  135 (415)
T 2fq6_A           80 GTLTHFSLQQA----MCELEGGAGC---------VLFPCGAAAVANSILAFIE-----------QGDHVLMTNTAYEPSQ  135 (415)
T ss_dssp             CCHHHHHHHHH----HHHHHTCSEE---------EEESSHHHHHHHHHHTTCC-----------TTCEEEEETTSCHHHH
T ss_pred             CCchHHHHHHH----HHHHhCCCeE---------EEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHH
Confidence            45666667666    8888887543         7889999999888775421           4667888999998877


Q ss_pred             HHH----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH--hC
Q 010842          203 KVC----KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE--YG  276 (499)
Q Consensus       203 ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~--~~  276 (499)
                      ..+    +..|+   +++.++.+       |+++|+++|++++      .+|++..++|++|.+.|+++|+++|++  +|
T Consensus       136 ~~~~~~l~~~G~---~v~~v~~~-------d~~~le~ai~~~t------klV~~e~~~NptG~v~dl~~I~~la~~~~~g  199 (415)
T 2fq6_A          136 DFCSKILSKLGV---TTSWFDPL-------IGADIVKHLQPNT------KIVFLESPGSITMEVHDVPAIVAAVRSVVPD  199 (415)
T ss_dssp             HHHHHTGGGGTC---EEEEECTT-------CGGGGGGGCCTTE------EEEEEESSCTTTCCCCCHHHHHHHHHHHCTT
T ss_pred             HHHHHHHHHcCc---EEEEECCC-------CHHHHHHhhccCC------cEEEEECCCCCCCEeecHHHHHHHHHhhcCC
Confidence            655    34678   88888753       7889999886543      478889999999999999999999999  99


Q ss_pred             CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842          277 IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV  354 (499)
Q Consensus       277 ~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  354 (499)
                      +++|+|++|+.+....|    ...   .+|.++.++||+++.+.+  .|+++.++. .+. .+......           
T Consensus       200 ~~livD~a~a~~~~~~p----~~~---g~Div~~S~sK~lg~~g~~~~G~l~~~~~-~~~-~l~~~~~~-----------  259 (415)
T 2fq6_A          200 AIIMIDNTWAAGVLFKA----LDF---GIDVSIQAATKYLVGHSDAMIGTAVCNAR-CWE-QLRENAYL-----------  259 (415)
T ss_dssp             CEEEEECTTTTTTSSCG----GGG---TCSEEEEETTTTTTCSSSCCCEEEEECTT-THH-HHHHHHHH-----------
T ss_pred             CEEEEECCCcccccCCc----ccc---CCeEEEEeCccccCCCCCceEEEEEeCHH-HHH-HHHHHHHh-----------
Confidence            99999999986532222    111   489999999999997754  688877654 222 11110000           


Q ss_pred             ccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-cC----------------CCc
Q 010842          355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV-VP----------------RHF  417 (499)
Q Consensus       355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~----------------~~~  417 (499)
                               .+........|..++.  .+.+..++++..++++.+.+.|++.|.+.-+ .+                ...
T Consensus       260 ---------~G~~~~~~~a~~~~~~--l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g  328 (415)
T 2fq6_A          260 ---------MGQMVDADTAYITSRG--LRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSS  328 (415)
T ss_dssp             ---------TTCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCC
T ss_pred             ---------cCCCCCHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCc
Confidence                     0111123455655544  3677788888899999999999998876533 21                135


Q ss_pred             eEEEEEecCC-CCCCcchhHHHHHHHHHHHHhc------CCE---EEE--e---ee-E----CC--EEEEEEeccCCCCc
Q 010842          418 ALVCFRLNPY-PHSGSADTEMLNRKLLDWVNST------GRV---YLT--H---TI-V----GG--LYMLRFAVGASLTD  475 (499)
Q Consensus       418 ~~v~f~~~~~-~~~~~~~~~~~~~~l~~~l~~~------g~~---~~~--~---~~-~----~g--~~~lRi~~~~~~~t  475 (499)
                      ++++|.+.+. .       .....++++.+...      |.+   ...  +   +. .    .|  ...+|+|++ ..++
T Consensus       329 ~i~sf~l~g~~~-------~~~~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G-~e~~  400 (415)
T 2fq6_A          329 GLFSFVLKKKLN-------NEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIG-LEDV  400 (415)
T ss_dssp             SEEEEEESSCCC-------HHHHHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECC-SSCH
T ss_pred             eEEEEEECCCCC-------HHHHHHHHHhCCcCeEeccCCCCceeEEecCCCccccccchhhcCCCCCEEEEEec-CCCH
Confidence            6888888642 1       12244555544211      211   111  1   00 0    12  368999996 8889


Q ss_pred             HHHHHHHHHHHHH
Q 010842          476 ERHVVAAWELIME  488 (499)
Q Consensus       476 ~~di~~l~~~l~~  488 (499)
                      +++|+.+.++|++
T Consensus       401 ~d~i~~l~~al~~  413 (415)
T 2fq6_A          401 DDLIADLDAGFAR  413 (415)
T ss_dssp             HHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999988864

>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}

Probab=99.84  E-value=1.4e-19  Score=186.30  Aligned_cols=308  Identities=13%  Similarity=0.039  Sum_probs=191.7

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-HH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-FA  202 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-~~  202 (499)
                      .+....+|...++++++++|.+...        ++++|||+||..++.+.++           ++..|+++..+|.+ +.
T Consensus        86 ~~~~~~~e~~a~~~la~~~g~~~~~--------v~~~sGs~a~~~a~~~~~~-----------~Gd~Vl~~~~~~~~~~~  146 (447)
T 3h7f_A           86 CEHVDVVENLARDRAKALFGAEFAN--------VQPHSGAQANAAVLHALMS-----------PGERLLGLDLANGGHLT  146 (447)
T ss_dssp             CHHHHHHHHHHHHHHHHHHTCSEEE--------CCCSSHHHHHHHHHHHHCC-----------TTCEEEEECGGGTCCGG
T ss_pred             cHHHHHHHHHHHHHHHHHcCCCceE--------EEeCCHHHHHHHHHHHhcC-----------CCCEEEecCcccccccc
Confidence            3444456665558999999987642        4488999999988877643           56678888888765 21


Q ss_pred             HH--HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEE
Q 010842          203 KV--CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVH  280 (499)
Q Consensus       203 ka--~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lh  280 (499)
                      ..  ....|.+. .++.+|++++ ++.+|+++|++++.+.+     |.+|+++.++++++.  ++++|+++|++||+++|
T Consensus       147 ~~~~~~~~g~~~-~~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli  217 (447)
T 3h7f_A          147 HGMRLNFSGKLY-ENGFYGVDPA-THLIDMDAVRATALEFR-----PKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLL  217 (447)
T ss_dssp             GTCTTSHHHHSS-EEEEECCCTT-TCSCCHHHHHHHHHHHC-----CSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEE
T ss_pred             hhhhhhhcCCee-EEEEcCcCcc-cCCcCHHHHHHHHHhcC-----CeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEE
Confidence            11  12222210 4556666643 47899999999997532     236666677776665  99999999999999999


Q ss_pred             eeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCCC
Q 010842          281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFKD  359 (499)
Q Consensus       281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~~  359 (499)
                      +|++|+.+......+...   ++.+|+++.++||++++|.+ |+++.++. .. +.+.. ..++..              
T Consensus       218 ~Dea~~~g~~~~g~~~~~---~~~~di~~~s~sK~l~G~~g-G~i~~~~~-~~-~~l~~~~~~~~~--------------  277 (447)
T 3h7f_A          218 VDMAHFAGLVAAGLHPSP---VPHADVVSTTVHKTLGGGRS-GLIVGKQQ-YA-KAINSAVFPGQQ--------------  277 (447)
T ss_dssp             EECTTTHHHHHTTSSCCS---TTTCSEEEEESSGGGCCCSC-EEEEECGG-GH-HHHHHHHTTTTC--------------
T ss_pred             EECCchhhhhcCCCCCCC---CCCCcEEEecCCcCCCCCCe-EEEEECHH-HH-HHHhhhcCCccc--------------
Confidence            999975543322211111   23589999999999987765 77777653 22 22211 011110              


Q ss_pred             cccCCCCCC--CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEEcC-CCceEEEEEecCCCCCCc
Q 010842          360 WQVGTGRRF--KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PRFEIVVP-RHFALVCFRLNPYPHSGS  432 (499)
Q Consensus       360 ~~~~~sr~~--~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~-~~~~~v~f~~~~~~~~~~  432 (499)
                           +...  ....+.+++.....++++++.++..++++++.+.|++.    ++++++.. ...+.+.+.+.+.+.   
T Consensus       278 -----~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---  349 (447)
T 3h7f_A          278 -----GGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPL---  349 (447)
T ss_dssp             -----SSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSC---
T ss_pred             -----CCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCC---
Confidence                 0011  12333444444445578889999999999999999876    58888752 344556666544220   


Q ss_pred             chhHHHHHHHHHHHHhcCCEEEE---ee---eECCEEEEEEeccC---CCCcHHHHHHHHHHHHHHHHH
Q 010842          433 ADTEMLNRKLLDWVNSTGRVYLT---HT---IVGGLYMLRFAVGA---SLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       433 ~~~~~~~~~l~~~l~~~g~~~~~---~~---~~~g~~~lRi~~~~---~~~t~~di~~l~~~l~~~~~~  492 (499)
                           ....+.+.+.+.|..+..   +.   ......++|+++..   ...+++|++++++.|.++.++
T Consensus       350 -----~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~  413 (447)
T 3h7f_A          350 -----DGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIATALAT  413 (447)
T ss_dssp             -----CHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHS
T ss_pred             -----CHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence                 023344445555744321   11   11223569998631   125789999999999887654

>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.84  E-value=2.7e-19  Score=180.75  Aligned_cols=295  Identities=13%  Similarity=0.104  Sum_probs=184.9

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc--CCeEEEcCCCCchhHHHHHH
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM--HKLVVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~--~~~~i~~s~~~H~s~~ka~~  206 (499)
                      ....++.+++++++|. +.        .++++|||+|+..++.+++......   .|.  ++..|++...+|.+....+.
T Consensus        78 ~~~~~l~~~la~~~g~-~~--------v~~~~~gt~a~~~al~~~~~~~~~~---~~~~~~~~~vi~~~~~~~~~~~~~~  145 (392)
T 3ruy_A           78 DQLGPWYEKVAKLTNK-EM--------VLPMNTGAEAVETAIKTARRWAYDV---KKVEANRAEIIVCEDNFHGRTMGAV  145 (392)
T ss_dssp             TTHHHHHHHHHHHHTC-SE--------EEEESSHHHHHHHHHHHHHHHHHHT---SCCCTTCCEEEEETTCCCCSSHHHH
T ss_pred             HHHHHHHHHHHHhcCC-CE--------EEEeCcHHHHHHHHHHHHHHhhhhc---cCCCCCCcEEEEEcCCcCCCCHhhh
Confidence            3445566779999983 32        4999999999999998876531110   011  24467777777765444443


Q ss_pred             HhCCC-C---------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHH
Q 010842          207 LAGVS-P---------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVA  272 (499)
Q Consensus       207 ~~G~g-~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia  272 (499)
                      .++.. .         ..+..++.       .|+++|+++++++      +.+|+++.++|++|.+.|    +++|+++|
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~~i~~l~  212 (392)
T 3ruy_A          146 SMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKAAITPN------TAAFILEPIQGEAGINIPPAGFLKEALEVC  212 (392)
T ss_dssp             HTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHHHCCTT------EEEEEECSSBSTTTSBCCCTTHHHHHHHHH
T ss_pred             hccCChhhccccCCCCCCCeeeCc-------ccHHHHHHHhccC------eEEEEEeCccCCCCCccCCHHHHHHHHHHH
Confidence            33221 0         01333332       2899999998733      458888889999999988    99999999


Q ss_pred             HHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCC
Q 010842          273 NEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSES  351 (499)
Q Consensus       273 ~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~  351 (499)
                      ++||+++|+|++|+++............++ ..|.++++  |++... ...|+++.+++  +.+.+..   ....     
T Consensus       213 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~~~S--K~l~gG~~~~G~~~~~~~--~~~~~~~---~~~~-----  279 (392)
T 3ruy_A          213 KKENVLFVADEIQTGLGRTGKVFACDWDNV-TPDMYILG--KALGGGVFPISCAAANRD--ILGVFEP---GSHG-----  279 (392)
T ss_dssp             HTTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTTSCCEEEEECHH--HHTTCCT---TSSC-----
T ss_pred             HHcCCEEEEeechhCCCccccchhhhccCC-CCCEEEEc--hhhhCChhhhEEEEECHH--HHhhhcc---CCcC-----
Confidence            999999999999975432211111111222 36888876  987653 45888887552  2121111   0000     


Q ss_pred             CCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC--CCeEEEcCCCceEEEEEecCCCC
Q 010842          352 NSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD--PRFEIVVPRHFALVCFRLNPYPH  429 (499)
Q Consensus       352 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~v~f~~~~~~~  429 (499)
                                  .+.....+...++...+.....++..++..++++++.+.|+++  +.+... ++..+++.+.+.. . 
T Consensus       280 ------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~g~~~~~~~~~-~-  344 (392)
T 3ruy_A          280 ------------STFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEIDNPMITEV-RGKGLFIGIELNE-P-  344 (392)
T ss_dssp             ------------CSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCCCTTEEEE-EEETTEEEEEESS-C-
T ss_pred             ------------CCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhcCCCceEE-EeeeeEEEEEEcc-h-
Confidence                        0111223444444433322122567788889999999999887  334433 3445666676643 2 


Q ss_pred             CCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          430 SGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       430 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                               ..++.+.|.++|+. +.+.   +..++|+++. ..+|++|+++++++|+++.
T Consensus       345 ---------~~~l~~~l~~~gi~-v~~~---~~~~iRi~~~-~~~~~~~i~~~~~~l~~~l  391 (392)
T 3ruy_A          345 ---------ARPYCEQLKAAGLL-CKET---HENVIRIAPP-LVISEEDLEWAFQKIKAVL  391 (392)
T ss_dssp             ---------SHHHHHHHHTTTEE-CCCB---TTTEEEECCC-TTCCHHHHHHHHHHHHHHH
T ss_pred             ---------HHHHHHHHHHCCcE-EecC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHh
Confidence                     35677778888843 3322   2467999984 7789999999999998864

>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}

Probab=99.84  E-value=9.9e-20  Score=185.10  Aligned_cols=249  Identities=14%  Similarity=0.106  Sum_probs=174.0

Q ss_pred             HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH---
Q 010842          131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL---  207 (499)
Q Consensus       131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~---  207 (499)
                      ..++.+++++++|.+.         .++++||++|+..++.+...           ++..|+++...|.+....+..   
T Consensus        83 ~~~l~~~la~~~g~~~---------~~~~~sG~~Ai~~al~~l~~-----------~Gd~Vi~~~~~y~~~~~~~~~~~~  142 (414)
T 3ndn_A           83 VSVFEERLRLIEGAPA---------AFATASGMAAVFTSLGALLG-----------AGDRLVAARSLFGSCFVVCSEILP  142 (414)
T ss_dssp             HHHHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHTTCC-----------TTCEEEEESCCCHHHHHHHHTHHH
T ss_pred             HHHHHHHHHHHHCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCccchHHHHHHHHHH
Confidence            3344455889998753         38999999998887776532           566788899999987776644   


Q ss_pred             -hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842          208 -AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA  286 (499)
Q Consensus       208 -~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g  286 (499)
                       .|+   +++.||.+       |+++|++++++++      .+|++..++|++|.+.|+++|+++|+++|+++++|++|+
T Consensus       143 ~~g~---~~~~v~~~-------d~~~l~~ai~~~t------~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~  206 (414)
T 3ndn_A          143 RWGV---QTVFVDGD-------DLSQWERALSVPT------QAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFA  206 (414)
T ss_dssp             HTTC---EEEEECTT-------CHHHHHHHTSSCC------SEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTT
T ss_pred             HcCc---EEEEeCCC-------CHHHHHHhcCCCC------eEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCc
Confidence             888   89888864       8899999986543      378889999999999999999999999999999999998


Q ss_pred             chhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCC
Q 010842          287 GSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGT  364 (499)
Q Consensus       287 ~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~  364 (499)
                      .+....+.    ..   ++|.++.+.+|+++.+..  +|+++.+++. +.+.+......                    .
T Consensus       207 ~~~~~~~~----~~---g~div~~S~sK~l~~~G~~~~G~vv~~~~~-~~~~l~~~~~~--------------------~  258 (414)
T 3ndn_A          207 TPLLQQGF----PL---GVDVVVYSGTKHIDGQGRVLGGAILGDREY-IDGPVQKLMRH--------------------T  258 (414)
T ss_dssp             HHHHCCCG----GG---TCSEEEEETTTTTTCSSCCCCEEEEECHHH-HTTHHHHHHHH--------------------H
T ss_pred             ccccCCch----hc---CCCeEeccCCccccCCCCceEEEEEECHHH-HHHHHHHHHHH--------------------c
Confidence            65433221    11   379999999999986543  7887776542 21111100000                    0


Q ss_pred             CCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC-----------------ceEEEEEecCC
Q 010842          365 GRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH-----------------FALVCFRLNPY  427 (499)
Q Consensus       365 sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-----------------~~~v~f~~~~~  427 (499)
                      +.....+..|+.++.  .+.+..++++..++++++.+.|++.|++..+..|.                 ..+++|.+.+.
T Consensus       259 g~~~~~~~a~~~~~~--l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~  336 (414)
T 3ndn_A          259 GPAMSAFNAWVLLKG--LETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCP  336 (414)
T ss_dssp             CCCCCHHHHHHHHHH--GGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSC
T ss_pred             CCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCC
Confidence            112245666766664  47788889999999999999999999886543332                 35788887542


Q ss_pred             CCCCcchhHHHHHHHHHHHHhc
Q 010842          428 PHSGSADTEMLNRKLLDWVNST  449 (499)
Q Consensus       428 ~~~~~~~~~~~~~~l~~~l~~~  449 (499)
                      .    ........++.+.+...
T Consensus       337 ~----~~~~~~~~~~~~~l~~~  354 (414)
T 3ndn_A          337 E----DVAKQRAFEVLDKMRLI  354 (414)
T ss_dssp             G----GGHHHHHHHHHHHCSSS
T ss_pred             c----cccHHHHHHHHHhCccc
Confidence            0    00023356677766543

>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3

Probab=99.84  E-value=7.5e-19  Score=179.35  Aligned_cols=255  Identities=15%  Similarity=0.139  Sum_probs=169.1

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|...++|+.    +++++|.+..         +++++||+|+..++.+...           ++..|+++...|.+..
T Consensus        56 ~~~~~~~l~~~----la~~~g~~~~---------v~~~sGt~A~~~~l~~~~~-----------~gd~vi~~~~~~~~~~  111 (421)
T 2ctz_A           56 MNPTVDVLEKR----LAALEGGKAA---------LATASGHAAQFLALTTLAQ-----------AGDNIVSTPNLYGGTF  111 (421)
T ss_dssp             BCHHHHHHHHH----HHHHHTCSEE---------EEESSHHHHHHHHHHHHCC-----------TTCEEEECSCCCHHHH
T ss_pred             CChHHHHHHHH----HHHHhCCCce---------EEecCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHH
Confidence            34444555555    8888887643         7777889999988876521           4667899999999887


Q ss_pred             HHH----HHhCCCCCCeEEe-eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842          203 KVC----KLAGVSPANIRAL-PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI  277 (499)
Q Consensus       203 ka~----~~~G~g~~~v~~v-~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~  277 (499)
                      ..+    +..|+   +++.+ +.+       |+++|+++|+++      +.+|++..++|++|.+.|+++|+++|+++|+
T Consensus       112 ~~~~~~~~~~g~---~~~~~~~~~-------d~~~l~~~i~~~------~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~  175 (421)
T 2ctz_A          112 NQFKVTLKRLGI---EVRFTSREE-------RPEEFLALTDEK------TRAWWVESIGNPALNIPDLEALAQAAREKGV  175 (421)
T ss_dssp             HHHHTHHHHTTC---EEEECCTTC-------CHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHcCC---EEEEECCCC-------CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence            765    67788   88888 643       889999988653      3478899999999999999999999999999


Q ss_pred             EEEeeccc-cchhccCccchhhhcCCCCCceeEecccccccCCCc-ceEEEEeC--chh----HHHhhcCCccCCCCCCC
Q 010842          278 WVHVDAAY-AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-CCCLWVKQ--PGL----LVKALSTDPEYLKNKPS  349 (499)
Q Consensus       278 ~lhvD~A~-g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~r~--~~~----l~~~~~~~~~yl~~~~~  349 (499)
                      ++|+|++| +.+.. ..   ....   .+|++++++||+++.|.+ .|.+++++  ...    +.........|......
T Consensus       176 ~livD~~~~~~g~~-~~---~~~~---~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~  248 (421)
T 2ctz_A          176 ALIVDNTFGMGGYL-LR---PLAW---GAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLT  248 (421)
T ss_dssp             EEEEECGGGGGGTS-CC---GGGG---TCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHH
T ss_pred             EEEEECCccccccc-CC---cccc---CCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhh
Confidence            99999999 65421 11   1111   389999999999998764 66666652  111    11111111111100000


Q ss_pred             CCCCcccCC-----CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC----------
Q 010842          350 ESNSVVDFK-----DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP----------  414 (499)
Q Consensus       350 ~~~~~~~~~-----~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~----------  414 (499)
                      .......+.     ......+.....+..|+.++.+  +.+..++++..++++++.+.|+++|+++.+..          
T Consensus       249 ~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l--~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~  326 (421)
T 2ctz_A          249 EAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGM--ETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHD  326 (421)
T ss_dssp             HHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHH
T ss_pred             hhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCc--chHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHH
Confidence            000000000     0000122344556666665543  56777788888999999999999999987631          


Q ss_pred             --------CCceEEEEEecC
Q 010842          415 --------RHFALVCFRLNP  426 (499)
Q Consensus       415 --------~~~~~v~f~~~~  426 (499)
                              ...++++|.+.+
T Consensus       327 ~~~~~~~~~~g~ivsf~l~~  346 (421)
T 2ctz_A          327 RAQKYFKGKPGAVLTFGLKG  346 (421)
T ss_dssp             HHHHHHTTCCCSEEEEEETT
T ss_pred             HHHHhccCCCceEEEEEeCC
Confidence                    235678888864

>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}

Probab=99.84  E-value=1e-19  Score=185.29  Aligned_cols=338  Identities=14%  Similarity=0.107  Sum_probs=200.5

Q ss_pred             HHHHHHHHHHcccCC-----cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHH
Q 010842          104 GFLGEMLCACFNSVG-----FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRAL  178 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~-----~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~  178 (499)
                      ..+.+.+...+..+.     ..|...++..++++++.+|+.+.+|.+...     ...++|+|||+|+..++.+....- 
T Consensus        49 ~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~-----~~i~~t~G~t~al~~~~~~l~~~g-  122 (417)
T 3g7q_A           49 DYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEP-----QNIALTNGSQSAFFYLFNLFAGRR-  122 (417)
T ss_dssp             HHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCG-----GGEEEESCHHHHHHHHHHHHSBC--
T ss_pred             HHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCc-----ccEEEeCCcHHHHHHHHHHHcCCC-
Confidence            455555555543221     256666677899999999998888864321     257999999999998888764210 


Q ss_pred             hHhhhhccCCeEEEcC-CCCchhHHHHHHHh----CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEe
Q 010842          179 DAVGAENMHKLVVYGS-DQTHSTFAKVCKLA----GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCAT  253 (499)
Q Consensus       179 ~~~~~~g~~~~~i~~s-~~~H~s~~ka~~~~----G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t  253 (499)
                          .+| .+..|+++ ..+|..+...+...    +.+. .+..++.+.. ++.+|+++|+  +.+      .+.+|+.+
T Consensus       123 ----d~~-~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~d~~~l~--~~~------~~~~v~~~  187 (417)
T 3g7q_A          123 ----ADG-STKKVLFPLAPEYIGYADSGLEDDLFVSARP-NIELLPEGQF-KYHVDFEHLH--IGE------ETGMICVS  187 (417)
T ss_dssp             --------CCBEEEESSCCCHHHHHC-----CCEEECCC-EEEEEGGGEE-EEECCGGGCC--CCT------TEEEEEEE
T ss_pred             ----ccC-CcceEEEeCCCccccchhhccchhhhccccC-cccccCCccc-ccccCHHHhc--ccc------CceEEEEC
Confidence                000 11157776 77787776665432    2311 3333443211 3678999988  332      24578889


Q ss_pred             cCCCcccccCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCc
Q 010842          254 VGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQP  330 (499)
Q Consensus       254 ~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~  330 (499)
                      .++|+||.+-|   +++|+++|++||+++++|++|+.+.... .+..........+.++.+.+|++.....+|+++.+. 
T Consensus       188 ~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~G~r~G~~~~~~-  265 (417)
T 3g7q_A          188 RPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGI-IFSEARPLWNPNIILCMSLSKLGLPGSRCGIIIAND-  265 (417)
T ss_dssp             SSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCC-BCSCCCCCCCTTEEEEEESGGGTCTTSCCEEEECCH-
T ss_pred             CCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccc-cccccccCCCCCEEEEEechhccCCCcceEEEEeCH-
Confidence            99999999977   8999999999999999999997532111 111111122346778889999755556688876643 


Q ss_pred             hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHH----HH-HHHHHHHHHHHHHHHHhc
Q 010842          331 GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNL----QS-HIRSDIRLAKMFEGFVKS  405 (499)
Q Consensus       331 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~----~~-~~~~~~~~a~~l~~~L~~  405 (499)
                      +.. +.+.......                    +.....+...++...+....+    .+ +.++..++.+++.+.|++
T Consensus       266 ~~~-~~~~~~~~~~--------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  324 (417)
T 3g7q_A          266 KTI-TAIANMNGII--------------------SLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRR  324 (417)
T ss_dssp             HHH-HHHHHHHHHH--------------------CCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred             HHH-HHHHHhhcce--------------------eeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            222 2221100000                    001122333333333321112    22 344555666677777765


Q ss_pred             -CC--CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-C--------EEEEEEeccCCC
Q 010842          406 -DP--RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-G--------LYMLRFAVGASL  473 (499)
Q Consensus       406 -~~--~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g--------~~~lRi~~~~~~  473 (499)
                       ++  ++++..+.....+++.+....        ....++.+.|.++|+.+..+..+. +        ..++|++++ . 
T Consensus       325 ~l~~~~~~~~~~~~g~~~~~~~~~~~--------~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~~~~~~iRis~~-~-  394 (417)
T 3g7q_A          325 YLSEERCLIHKPEGAIFLWLWFKDLP--------ITTELLYQRLKARGVLMVPGHYFFPGLDKPWPHTHQCMRMNYV-P-  394 (417)
T ss_dssp             HCCTTTCEEECCCBSSEEEEECTTCS--------SCHHHHHHHHHHTTEECEEGGGGCTTBSSCCGGGGGEEEEESC-S-
T ss_pred             hcccCCceeeCCCcceEEEEEcCCCC--------CCHHHHHHHHHHCCEEEECchhhCCCCccccccCCCeEEEEec-C-
Confidence             45  467665544555666664311        013567777777886554433321 1        468999995 3 


Q ss_pred             CcHHHHHHHHHHHHHHHHHHhcc
Q 010842          474 TDERHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       474 ~t~~di~~l~~~l~~~~~~l~~~  496 (499)
                       ++++|++++++|.++.+++.++
T Consensus       395 -~~~~i~~~~~~l~~~l~~~~~~  416 (417)
T 3g7q_A          395 -EPDKIEAGVKILAEEIERAWRE  416 (417)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CHHHHHHHHHHHHHHHHHHHhc
Confidence             8999999999999998877543

>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*

Probab=99.83  E-value=3.3e-19  Score=180.72  Aligned_cols=356  Identities=10%  Similarity=0.003  Sum_probs=215.0

Q ss_pred             HHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcc-cCCcccccChhhHHHHHHHHHHHHHHcCCC--C
Q 010842           70 ETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFN-SVGFNWLASPASTELEIVVMDWLATMLKLP--K  146 (499)
Q Consensus        70 ~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~--~  146 (499)
                      -.+.+.+...-.++..+.....|+.+...++..+. +.+.+..... .....|....+..++.+++.+|+.+..|.+  +
T Consensus        16 ~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~-v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~   94 (401)
T 7aat_A           16 LGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNC-VRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKS   94 (401)
T ss_dssp             HHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHH-HHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT
T ss_pred             HHHHHHHhhCCCCCceeeeeeeEECCCCCEechHH-HHHHHHHhcccccccCCCCCCCCHHHHHHHHHHhcCCCcccccc
Confidence            44445554433344444444444444433333333 3443444332 234456666677889999888887766642  2


Q ss_pred             ccccCCCccEEE--cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCC
Q 010842          147 TFMFSGTGGGVI--QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDA  224 (499)
Q Consensus       147 ~~~~~~~~~g~~--t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~  224 (499)
                      +       ..++  |+|||+|+..++.+.+...        .++..|+++.++|..+...++..|.   +++.+|++.+.
T Consensus        95 ~-------~i~~v~t~G~~~al~~~~~~l~~~~--------~~gd~Vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~  156 (401)
T 7aat_A           95 G-------RYVTVQGISGTGSLRVGANFLQRFF--------KFSRDVYLPKPSWGNHTPIFRDAGL---QLQAYRYYDPK  156 (401)
T ss_dssp             T-------CEEEEEEEHHHHHHHHHHHHHHHHC--------TTCCEEEEEESCCTTHHHHHHHTTC---EEEEEECEETT
T ss_pred             C-------ceEEEecCcchHHHHHHHHHHHHhc--------cCCCEEEEcCCCchhHHHHHHHcCC---eeEeeeeeccc
Confidence            2       2455  9999999998877654211        1466788899999999999999999   99999986434


Q ss_pred             CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCcc--chhh-
Q 010842          225 NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPE--FRHY-  298 (499)
Q Consensus       225 ~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~--~~~~-  298 (499)
                      ++.+|++++++.+++ .  ...+.+|+.+.++||||.+   +++++|+++|++||+++++|.+|+.+......  .... 
T Consensus       157 ~~~~d~~~l~~~l~~-~--~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~  233 (401)
T 7aat_A          157 TCSLDFTGAMEDISK-I--PEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALR  233 (401)
T ss_dssp             TTEECHHHHHHHHTT-S--CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHH
T ss_pred             cCccCHHHHHHHHHh-C--CCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHH
Confidence            579999999988865 1  2235678889999999976   55889999999999999999999876542210  0000 


Q ss_pred             -hcCCCCCceeEecccccccCC-CcceEEEEe--Cchh---HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcH
Q 010842          299 -LNGIERVDSFSFSPHKWLLSY-LDCCCLWVK--QPGL---LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSL  371 (499)
Q Consensus       299 -~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r--~~~~---l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al  371 (499)
                       ......-..++.+++|.++.| ..+|++++.  ++..   +...+..   +....              . .  ...+.
T Consensus       234 ~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~---~~~~~--------------~-~--~~~~~  293 (401)
T 7aat_A          234 HFIEQGIDVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKI---LIRPM--------------Y-S--NPPMN  293 (401)
T ss_dssp             HHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHH---HHHHH--------------H-S--SCCHH
T ss_pred             HHHhcCCcEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHH---HHHhc--------------c-C--CCChH
Confidence             112223456789999999755 347887762  3321   1111110   00000              0 0  00122


Q ss_pred             HHHHHHHHh--c------HHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHH
Q 010842          372 RLWMVLRSY--G------VLNLQSHIRSDIRLAKMFEGFVKSDP---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNR  440 (499)
Q Consensus       372 ~~~~~l~~~--g------~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~  440 (499)
                      ...++...+  +      .+.+++..++..++++++.+.|++..   ++++. +|..+.+.|.  +..          .+
T Consensus       294 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-~~~~~~~~~~--~~~----------~~  360 (401)
T 7aat_A          294 GARIASLILNTPELRKEWLVEVKGMADRIISMRTQLVSNLKKEGSSHNWQHI-TDQIGMFCFT--GLK----------PE  360 (401)
T ss_dssp             HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHH-HHCCSSEEEC--CCC----------HH
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcee-cCCcceEEec--CCC----------HH
Confidence            333332222  1      34466777788889999999998862   34433 2343444442  211          12


Q ss_pred             HHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          441 KLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       441 ~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      .+...+.+.|+. +.+       .+|++++ ..++ ++|++++++|+++.
T Consensus       361 ~~~~ll~~~gi~-v~~-------~~Ris~~-~~~~-~~i~~~~~~l~~~~  400 (401)
T 7aat_A          361 QVERLTKEFSIY-MTK-------DGRISVA-GVAS-SNVGYLAHAIHQVT  400 (401)
T ss_dssp             HHHHHHHHHCEE-CCT-------TCEEEGG-GCCT-TTHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCEe-ccC-------CCeEEec-cCCh-hhHHHHHHHHHHHh
Confidence            222223445743 332       2799996 4444 45999999998864

>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}

Probab=99.83  E-value=6.6e-19  Score=176.71  Aligned_cols=287  Identities=10%  Similarity=0.042  Sum_probs=179.9

Q ss_pred             HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCC-eEEEcCCCC-chhHHHHHHHhC
Q 010842          132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHK-LVVYGSDQT-HSTFAKVCKLAG  209 (499)
Q Consensus       132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~-~~i~~s~~~-H~s~~ka~~~~G  209 (499)
                      .++.+++++++|.++        ..++|+|||+|+..++.+++.....     +.++ ..|+++..+ |.+...+....|
T Consensus        73 ~~l~~~la~~~g~~~--------~v~~~~g~t~a~~~~~~~~~~~~~~-----~~~g~~~vl~~~~~y~~~~~~~~~~~~  139 (375)
T 2eh6_A           73 EELAHKLVKHFWTEG--------KVFFANSGTESVEAAIKLARKYWRD-----KGKNKWKFISFENSFHGRTYGSLSATG  139 (375)
T ss_dssp             HHHHHHHHHTSSSCE--------EEEEESSHHHHHHHHHHHHHHHHHH-----TTCCCCEEEEEBTCCCCSSHHHHHHCB
T ss_pred             HHHHHHHHhhcCCCC--------eEEEeCchHHHHHHHHHHHHHHhcc-----CCCCCCEEEEECCCcCCCchhhhhhcC
Confidence            344566888899853        3599999999999998865432100     0133 567777666 444444444333


Q ss_pred             C-----CCC----CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhC
Q 010842          210 V-----SPA----NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYG  276 (499)
Q Consensus       210 ~-----g~~----~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~  276 (499)
                      .     |..    .+..+|.       +|+++|+++++++      +.+|+++.++|++|.+.|    +++|+++|++||
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~  206 (375)
T 2eh6_A          140 QPKFHKGFEPLVPGFSYAKL-------NDIDSVYKLLDEE------TAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKD  206 (375)
T ss_dssp             CGGGTTTTCSCCSSEEEECT-------TCHHHHHTTCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHHHT
T ss_pred             CccccCCCCCCCCCceeCCC-------chHHHHHHHhcCC------eEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhC
Confidence            2     000    1223321       5899999888642      457888889999999977    999999999999


Q ss_pred             CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          277 IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       277 ~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      +++|+|++|+++............+. ..|+++++  |+++.+.++|+++++++  +.+.+...   ...          
T Consensus       207 ~~li~De~~~~~~~~~~~~~~~~~~~-~~d~~s~S--K~~~~g~~~G~~~~~~~--~~~~~~~~---~~~----------  268 (375)
T 2eh6_A          207 VLLIIDEVQTGIGRTGEFYAYQHFNL-KPDVIALA--KGLGGGVPIGAILAREE--VAQSFTPG---SHG----------  268 (375)
T ss_dssp             CEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTSCCEEEEEEHH--HHTTCCTT---SCC----------
T ss_pred             CEEEEeccccCCCCCCcchhhhhcCC-CCCEEEEc--ccccCCCCeEEEEEcHH--HHhhhcCC---CCC----------
Confidence            99999999986422111111111121 37888877  88887888999998763  22222110   000          


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhH
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTE  436 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~  436 (499)
                             .+.....+...+++..+.  .+++..++..++++++.+.|++++...+  ++..+++++.+...         
T Consensus       269 -------~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~--~~~g~~~~~~~~~~---------  328 (375)
T 2eh6_A          269 -------STFGGNPLACRAGTVVVD--EVEKLLPHVREVGNYFKEKLKELGKGKV--KGRGLMLGLELERE---------  328 (375)
T ss_dssp             -------CSSTTCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSSEE--EEETTEEEEECSSC---------
T ss_pred             -------CCCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCCc--eEEEEEEEEEEcCc---------
Confidence                   000112344444443332  1226778888899999999988754222  23445666666432         


Q ss_pred             HHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          437 MLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       437 ~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                        ..++.+.|.++|+.+ .+.   +..++|+++. ..++++|+++++++|+++
T Consensus       329 --~~~~~~~l~~~gi~~-~~~---~~~~iRi~~~-~~~~~~~i~~~~~~l~~~  374 (375)
T 2eh6_A          329 --CKDYVLKALEKGLLI-NCT---AGKVLRFLPP-LIIQKEHIDRAISVLREI  374 (375)
T ss_dssp             --CHHHHHHHHHTTEEC-EEE---TTTEEEECCC-TTCCHHHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHCCCEE-ecC---CCCEEEEECC-CCCCHHHHHHHHHHHHHh
Confidence              245667777778543 322   3457999984 678999999999999875

>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*

Probab=99.83  E-value=5.8e-19  Score=188.39  Aligned_cols=239  Identities=13%  Similarity=0.126  Sum_probs=164.1

Q ss_pred             hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH
Q 010842          126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC  205 (499)
Q Consensus       126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~  205 (499)
                      ...++|+.    +++++|.+..+        ++++|+|.||..++.+..+           ++..|++++.+|.|+..++
T Consensus       196 ~i~eaE~~----lA~~fGa~~a~--------~v~nGts~An~~ai~al~~-----------pGD~VLv~r~~H~S~~~~l  252 (715)
T 3n75_A          196 PHKEAEQY----IARVFNADRSY--------MVTNGTSTANKIVGMYSAP-----------AGSTILIDRNCHKSLTHLM  252 (715)
T ss_dssp             HHHHHHHH----HHHHHTCSEEE--------EESSHHHHHHHHHHHHHCC-----------TTCEEEEESSCCHHHHHHH
T ss_pred             HHHHHHHH----HHHHhCCCCce--------EECcHHHHHHHHHHHHhCC-----------CCCEEEECCCccHHHHHHH
Confidence            34455555    99999998763        5566667898877776532           6788999999999999999


Q ss_pred             HHhCCCCCCeEEeeCCCCCCCcc---------CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC
Q 010842          206 KLAGVSPANIRALPTSVDANFSL---------SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG  276 (499)
Q Consensus       206 ~~~G~g~~~v~~v~~~~~~~~~~---------d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~  276 (499)
                      .+.|+   .+++++.+.+ .|.+         |+++|+++|++..+ .+.|.+|+++.+ |++|.+.|+++|+++|+++ 
T Consensus       253 ~lsGa---~pv~v~~~~~-~~gi~~~i~~~~~d~e~Le~~l~~~~~-~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~-  325 (715)
T 3n75_A          253 MMSDV---TPIYFRPTRN-AYGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK-  325 (715)
T ss_dssp             HHSCC---EEEEECCCBC-TTCCBCCCCGGGGSHHHHHHHHHHSTT-CCSCSEEEEESS-CTTSEEECHHHHHHHCCCS-
T ss_pred             HHcCC---EEEEEecccc-ccccccCcccccCCHHHHHHHHhhCcC-ccCceEEEEECC-CCCCccCCHHHHHHHhCcC-
Confidence            99999   9999987643 3443         89999999986432 123557888888 8999999999999999876 


Q ss_pred             CEEEeeccccchhccCccchhh--hcCCCCCcee---EecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCC
Q 010842          277 IWVHVDAAYAGSACICPEFRHY--LNGIERVDSF---SFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSES  351 (499)
Q Consensus       277 ~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi---~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~  351 (499)
                       +++||+||+++..+.+.+...  +..-..+|.+   +.++||+++++.++|++++++.... ..+.....++..     
T Consensus       326 -~livDEAH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqgs~i~v~~~i~~-~~~~~~~~~~~S-----  398 (715)
T 3n75_A          326 -SIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNE-ETFNEAYMMHTT-----  398 (715)
T ss_dssp             -EEEEECTTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTCEEEEEESCCCH-HHHHHHHHHTSC-----
T ss_pred             -cEEEccccccccccCCccccccccccCcCCCEEEEEEecccccccCCCCeeEEEeCchhhH-HHHHHHHHhhcC-----
Confidence             489999999876455543311  1110126776   8999999999889999999875211 111111111111     


Q ss_pred             CCcccCCCcccCCCCCCC--cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEEcC
Q 010842          352 NSVVDFKDWQVGTGRRFK--SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR------FEIVVP  414 (499)
Q Consensus       352 ~~~~~~~~~~~~~sr~~~--al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~------~~~~~~  414 (499)
                                   +.+.-  ...+-++++.+-.+.-+++.++..++++++++.|+++++      ++++.+
T Consensus       399 -------------TSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~  456 (715)
T 3n75_A          399 -------------TSPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQP  456 (715)
T ss_dssp             -------------SSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSC
T ss_pred             -------------CCchHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCc
Confidence                         11111  123334455543222355788999999999999988764      566543

>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}

Probab=99.83  E-value=2.7e-19  Score=182.67  Aligned_cols=315  Identities=10%  Similarity=-0.013  Sum_probs=195.8

Q ss_pred             cc-ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH--HHHHHHHHHHHhHhhhhcc------CCeE
Q 010842          120 NW-LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL--VTLIAARDRALDAVGAENM------HKLV  190 (499)
Q Consensus       120 ~~-~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~--~al~~ar~~~~~~~~~~g~------~~~~  190 (499)
                      .| ...++..+++++    ++++++.+.+       ..++|+|+++++.  .++.+..... +     |.      .+..
T Consensus        64 ~Yp~~~~g~~~lr~~----ia~~~~~~~~-------~i~~t~G~~~al~~~~~~~~l~~~~-~-----g~~~~~~~~gd~  126 (423)
T 3ez1_A           64 NYPGGVAGLPSARAL----FAGYLDVKAE-------NVLVWNNSSLELQGLVLTFALLHGV-R-----GSTGPWLSQTPK  126 (423)
T ss_dssp             SSCSCTTCCHHHHHH----HHHHTTSCGG-------GEEECSSCHHHHHHHHHHHHHHTCC-T-----TCSSCGGGGCCE
T ss_pred             CCCCCCCChHHHHHH----HHHHhCCChh-------hEEEeCCcHHHHHHHHHHHHHhccC-C-----CccccccCCCCE
Confidence            44 444556667766    6677787654       4689999999986  5655543200 0     00      0467


Q ss_pred             EEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEe-cCCCcccccCChh---
Q 010842          191 VYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCAT-VGTTSTTAVDNVE---  266 (499)
Q Consensus       191 i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t-~gtt~~G~id~l~---  266 (499)
                      |+++.++|..+...++..|.   +++.||++.+   .+|+++|++++++    ...+.+|+++ .++|+||.+-|.+   
T Consensus       127 Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~---g~d~~~l~~~l~~----~~~~~~v~~~~~~~NPtG~~~~~~~l~  196 (423)
T 3ez1_A          127 MIVTVPGYDRHFLLLQTLGF---ELLTVDMQSD---GPDVDAVERLAGT----DPSVKGILFVPTYSNPGGETISLEKAR  196 (423)
T ss_dssp             EEEEESCCHHHHHHHHHHTC---EEEEEEEETT---EECHHHHHHHHHS----CTTEEEEEECSSSCTTTCCCCCHHHHH
T ss_pred             EEEcCCCcHHHHHHHHHcCC---EEEeccCCCC---CCCHHHHHHHHhh----CCCceEEEECCCCCCCCCcCCCHHHHH
Confidence            88899999999999999999   9999999864   4999999999852    1123455444 7899999997776   


Q ss_pred             HHHHHH-HHhCCEEEeeccccchhccC---ccchhhh-----cCCCCCceeEecccccccCCCcceEEEEeCchhHHHhh
Q 010842          267 PLAEVA-NEYGIWVHVDAAYAGSACIC---PEFRHYL-----NGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL  337 (499)
Q Consensus       267 ~I~~ia-~~~~~~lhvD~A~g~~~~~~---~~~~~~~-----~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~  337 (499)
                      +|+++| ++||+++++|++|+...+..   +......     .+....+.+..+.+|++..+..+|+++.+++ .. +.+
T Consensus       197 ~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~G~r~G~~~~~~~-~~-~~~  274 (423)
T 3ez1_A          197 RLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKITFAGAGLGFVASSED-NI-RWL  274 (423)
T ss_dssp             HHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTSCSSSSCEEEEECHH-HH-HHH
T ss_pred             HHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhccCCcceEEEEeCHH-HH-HHH
Confidence            888888 99999999999998532221   1111111     1222356788899998766678888877653 22 222


Q ss_pred             cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH------HHHHHHHHHHHHH----HHHHHHHHhcCC
Q 010842          338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV------LNLQSHIRSDIRL----AKMFEGFVKSDP  407 (499)
Q Consensus       338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~------~g~~~~~~~~~~~----a~~l~~~L~~~~  407 (499)
                      .....+.                    +.....+..+++...+..      +.+++..+...+.    .+.+.+.|..++
T Consensus       275 ~~~~~~~--------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~  334 (423)
T 3ez1_A          275 SKYLGAQ--------------------SIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGG  334 (423)
T ss_dssp             HHHHHHS--------------------CSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred             HHHHhhh--------------------ccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCC
Confidence            1110000                    001123334444333322      2233333333333    344445555554


Q ss_pred             -CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEE-eeeE-----CCEEEEEEeccCCCCcHHHHH
Q 010842          408 -RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLT-HTIV-----GGLYMLRFAVGASLTDERHVV  480 (499)
Q Consensus       408 -~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~-----~g~~~lRi~~~~~~~t~~di~  480 (499)
                       ++++..+.....+.+.+....          ...+.+.+.++|+.+.. +..+     .+..++|+++. .. ++++|+
T Consensus       335 ~~~~~~~p~~g~~~~~~~~~~~----------~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~-~~-~~~~i~  402 (423)
T 3ez1_A          335 EYATWTLPKGGYFISLDTAEPV----------ADRVVKLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPT-RP-PVEEVR  402 (423)
T ss_dssp             SSEEECCCSBSSCEEEEESSSC----------HHHHHHHHHHTTEECCCTTTTSSTTCCSSSCEEEECCS-SS-CHHHHH
T ss_pred             CceEEeCCCccEEEEEECCCCc----------HHHHHHHHHHCCcEEecCcccccCCCCCCCCeEEEEcC-CC-CHHHHH
Confidence             477664545556666765421          35566777778854433 2112     23578999995 33 899999


Q ss_pred             HHHHHHHHHHHHHhc
Q 010842          481 AAWELIMEGADRLFK  495 (499)
Q Consensus       481 ~l~~~l~~~~~~l~~  495 (499)
                      +++++|.++.+++..
T Consensus       403 ~~~~~l~~~l~~~~~  417 (423)
T 3ez1_A          403 TAMQVVAACIRLATE  417 (423)
T ss_dssp             HHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHH
Confidence            999999998876643

>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*

Probab=99.83  E-value=6.2e-19  Score=178.45  Aligned_cols=295  Identities=12%  Similarity=0.034  Sum_probs=185.1

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      ....++.+++++++|.+         ..++|+|||+|+..++.+++.....  +..| ++.+|+.+...|.+...++...
T Consensus        82 ~~~~~l~~~la~~~g~~---------~v~~~~gg~~a~~~al~~~~~~~~~--~~~~-~~~vi~~~~~yh~~~~~~~~~~  149 (397)
T 2ord_A           82 RPQMELAELLSKNTFGG---------KVFFANTGTEANEAAIKIARKYGKK--KSEK-KYRILSAHNSFHGRTLGSLTAT  149 (397)
T ss_dssp             HHHHHHHHHHHHTTTSC---------EEEEESSHHHHHHHHHHHHHHHHHH--HCTT-CCEEEEEBTCCCCSSHHHHHHS
T ss_pred             HHHHHHHHHHHHhcCCC---------eEEEeCCHHHHHHHHHHHHHHHhhc--CCCC-CceEEEEcCCcCCCchhhhhcc
Confidence            45556667788888842         2499999999999998887642110  0001 2234445555677777777777


Q ss_pred             CCC---------CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc----cCChhHHHHHHHHh
Q 010842          209 GVS---------PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA----VDNVEPLAEVANEY  275 (499)
Q Consensus       209 G~g---------~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~----id~l~~I~~ia~~~  275 (499)
                      |..         ...++.+|.       .|+++|+++++++      +.+|+++.++|++|.    .+++++|+++|++|
T Consensus       150 g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~  216 (397)
T 2ord_A          150 GQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSED------VCAVFLEPIQGESGIVPATKEFLEEARKLCDEY  216 (397)
T ss_dssp             BCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCTT------EEEEEECSEECTTTCEECCHHHHHHHHHHHHHH
T ss_pred             CChhhccccCCCCCCeeEecC-------CCHHHHHHHhhcC------eEEEEEecccCCCCcccCCHHHHHHHHHHHHHc
Confidence            761         001666664       2899999988642      458888889999999    38899999999999


Q ss_pred             CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842          276 GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV  355 (499)
Q Consensus       276 ~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  355 (499)
                      |+++++|++|+++............+. ..|.+++  +|+++.+..+|+++++++. .  .+..  .  ...        
T Consensus       217 ~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~s~--sK~~~~G~r~G~~~~~~~~-~--~l~~--~--~~~--------  278 (397)
T 2ord_A          217 DALLVFDEVQCGMGRTGKLFAYQKYGV-VPDVLTT--AKGLGGGVPIGAVIVNERA-N--VLEP--G--DHG--------  278 (397)
T ss_dssp             TCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECSTT-C--CCCT--T--SSC--------
T ss_pred             CCEEEEEecccCCccCccchhhhhhCC-CCCeeee--ccccCCCcCeEEEEEchHh-c--ccCC--C--CcC--------
Confidence            999999999976432111111111122 2687765  7999976779999887641 1  1110  0  000        


Q ss_pred             cCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEEcCCCceEEEEEecCCC
Q 010842          356 DFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PRFEIVVPRHFALVCFRLNPYP  428 (499)
Q Consensus       356 ~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~~~  428 (499)
                              .+.....+..++   +++.+..   +++.++..++++++.+.|++.    +.+... ++..+++++.+....
T Consensus       279 --------~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~~~~  346 (397)
T 2ord_A          279 --------TTFGGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEYDVVADV-RGMGLMIGIQFREEV  346 (397)
T ss_dssp             --------CSSTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEECTTS
T ss_pred             --------CCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhCCceEEE-EEEeEEEEEEECChH
Confidence                    000112333333   3433322   356677778888888888654    332222 234466777765321


Q ss_pred             CCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          429 HSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       429 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                               ...++.+.|.++|..+...    +..++|+++. ..++++|+++++++|+++.++
T Consensus       347 ---------~~~~l~~~l~~~gi~v~~~----~~~~iRis~~-~~~~~e~i~~~~~~l~~~l~~  396 (397)
T 2ord_A          347 ---------SNREVATKCFENKLLVVPA----GNNTIRFLPP-LTVEYGEIDLAVETLKKVLQG  396 (397)
T ss_dssp             ---------CHHHHHHHHHHTTEECEEE----TTTEEEECCC-TTCCHHHHHHHHHHHHHHHHT
T ss_pred             ---------HHHHHHHHHHHCCCEEccC----CCCEEEEECC-cCCCHHHHHHHHHHHHHHHhh
Confidence                     1356777777778543322    3457999973 678999999999999988654

>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3

Probab=99.83  E-value=1.2e-19  Score=183.47  Aligned_cols=285  Identities=13%  Similarity=0.110  Sum_probs=188.5

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK  203 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k  203 (499)
                      .+...++++    .+++++|.+..         +++++||+|+..++. ...           ++..|+++...|.+...
T Consensus        54 ~~~~~~lr~----~la~~~g~~~~---------i~~~sGt~a~~~al~-~~~-----------~gd~Vi~~~~~y~~~~~  108 (393)
T 1n8p_A           54 NPNRENLER----AVAALENAQYG---------LAFSSGSATTATILQ-SLP-----------QGSHAVSIGDVYGGTHR  108 (393)
T ss_dssp             CHHHHHHHH----HHHHHTTCSEE---------EEESCHHHHHHHHHH-TSC-----------SSCEEEEESSCCHHHHH
T ss_pred             ChhHHHHHH----HHHHHhCCCcE---------EEECChHHHHHHHHH-HcC-----------CCCEEEEeCCCchHHHH
Confidence            344444554    48889988643         777778999988877 321           45678888888886555


Q ss_pred             H----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh----
Q 010842          204 V----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY----  275 (499)
Q Consensus       204 a----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~----  275 (499)
                      .    ++..|+   +++.+|++       | ++|+++|+++      +.+|++..++|++|.+.|+++|+++|+++    
T Consensus       109 ~~~~~~~~~G~---~v~~v~~~-------d-~~l~~~i~~~------t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~  171 (393)
T 1n8p_A          109 YFTKVANAHGV---ETSFTNDL-------L-NDLPQLIKEN------TKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQ  171 (393)
T ss_dssp             HHHHTSTTTCS---CCEEESSH-------H-HHHHHHSCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHcCc---EEEEeCCC-------h-HHHHHhcccC------ceEEEEECCCCCcceecCHHHHHHHHHHhCCCC
Confidence            3    445677   88888864       6 7888877543      45788899999999999999999999999    


Q ss_pred             CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cc-eEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842          276 GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DC-CCLWVKQPGLLVKALSTDPEYLKNKPSESNS  353 (499)
Q Consensus       276 ~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~-g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~  353 (499)
                      |+++|+|++|+.+....  ...    + .+|.++.++||+++.+. .. |+++.+++..+....... ..          
T Consensus       172 ~~~livD~a~~~~~~~~--~~~----~-~~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~~~-~~----------  233 (393)
T 1n8p_A          172 DVILVVDNTFLSPYISN--PLN----F-GADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQFLQ-NA----------  233 (393)
T ss_dssp             TCEEEEECTTTHHHHCC--GGG----G-TCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHH-HH----------
T ss_pred             CCEEEEeCCccccccCC--HHH----c-CCeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHHHH-Hh----------
Confidence            99999999998775421  111    1 38999999999998553 14 777776544332211110 00          


Q ss_pred             cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEE-cC-----C-----------
Q 010842          354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR-FEIV-VP-----R-----------  415 (499)
Q Consensus       354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~-~~~~-~~-----~-----------  415 (499)
                                .+........|+.++.+  +.+...+++..++++.+.+.|++.|. +.-+ .+     +           
T Consensus       234 ----------~g~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~  301 (393)
T 1n8p_A          234 ----------IGAIPSPFDAWLTHRGL--KTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRD  301 (393)
T ss_dssp             ----------HCCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGG
T ss_pred             ----------cCCCCCHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCC
Confidence                      01112345555555444  45667778888889999999988876 5432 22     1           


Q ss_pred             -C-ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEE---------EEee-eE-----------CC--EEEEEEecc
Q 010842          416 -H-FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY---------LTHT-IV-----------GG--LYMLRFAVG  470 (499)
Q Consensus       416 -~-~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---------~~~~-~~-----------~g--~~~lRi~~~  470 (499)
                       . .++++|.+.+.        ......+++.+...++.+         ..+. ..           .|  ...+|+|++
T Consensus       302 ~~~~~i~~~~l~~~--------~~~~~~~l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g  373 (393)
T 1n8p_A          302 ALGGGMISFRIKGG--------AEAASKFASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVG  373 (393)
T ss_dssp             GCCCSEEEEEESSC--------HHHHHHHHHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECC
T ss_pred             CCCccEEEEEeCCc--------HHHHHHHHhhCCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEc
Confidence             2 56788888542        223455666553222111         1000 00           12  368999996


Q ss_pred             CCCCcHHHHHHHHHHHHHH
Q 010842          471 ASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       471 ~~~~t~~di~~l~~~l~~~  489 (499)
                       ..+++++|+.+.++|+++
T Consensus       374 -~~~~~~~i~~l~~al~~~  391 (393)
T 1n8p_A          374 -IEDTDDLLEDIKQALKQA  391 (393)
T ss_dssp             -SSCHHHHHHHHHHHHHHH
T ss_pred             -cCCHHHHHHHHHHHHHHh
Confidence             889999999999999875

>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*

Probab=99.83  E-value=2.6e-19  Score=182.11  Aligned_cols=325  Identities=13%  Similarity=0.043  Sum_probs=204.0

Q ss_pred             HHHHHHHHHHc-c-cCCcccccChhhHHHHHHHHHHHHHHcCC--CCccccCCCccEEE--cCChHHHHHHHHHHHHHHH
Q 010842          104 GFLGEMLCACF-N-SVGFNWLASPASTELEIVVMDWLATMLKL--PKTFMFSGTGGGVI--QNTTSDSILVTLIAARDRA  177 (499)
Q Consensus       104 ~~~~~~l~~~~-n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~--~~~~~~~~~~~g~~--t~ggt~A~~~al~~ar~~~  177 (499)
                      ..+.+.+...+ + .....|...++..++++++.+|+....|.  +.+       ..++  |+|||+|+..++..++.. 
T Consensus        51 ~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~-------~v~~~~t~gg~~a~~~~~~~~~~~-  122 (412)
T 1ajs_A           51 PVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEK-------RVGGVQSLGGTGALRIGAEFLARW-  122 (412)
T ss_dssp             HHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT-------CEEEEEEEHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCCC-------cEEEEECCCcHHHHHHHHHHHHHh-
Confidence            44555555555 2 12334655566788888877776544443  222       3588  999999998886543321 


Q ss_pred             HhHhhhhccCC-----eEEEcCCCCchhHHHHHHHhCCCCCC-eEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEE
Q 010842          178 LDAVGAENMHK-----LVVYGSDQTHSTFAKVCKLAGVSPAN-IRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLC  251 (499)
Q Consensus       178 ~~~~~~~g~~~-----~~i~~s~~~H~s~~ka~~~~G~g~~~-v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv  251 (499)
                       .       ++     ..|+++..+|.++...++..|.   + ++.+|.+.++++.+|+++|++++++.   +....+|+
T Consensus       123 -~-------~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~  188 (412)
T 1ajs_A          123 -Y-------NGTNNKDTPVYVSSPTWENHNGVFTTAGF---KDIRSYRYWDTEKRGLDLQGFLSDLENA---PEFSIFVL  188 (412)
T ss_dssp             -S-------SSSSCCCSCEEEEESCCTHHHHHHHHTTC---SCEEEEECEETTTTEECHHHHHHHHHHS---CTTCEEEE
T ss_pred             -C-------cCcCCCCCeEEEcCCCcHHHHHHHHHcCC---ceeEEEeeecCCCCccCHHHHHHHHHhC---CCCcEEEE
Confidence             0       34     5688888999999999999999   9 99999853235789999999998752   11235677


Q ss_pred             EecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccC--ccchhh--hcCCCCCceeEecccccccCC-Ccce
Q 010842          252 ATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACIC--PEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCC  323 (499)
Q Consensus       252 ~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~--~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g  323 (499)
                      .+.++|+||.+   +++++|+++|++||+++++|++|.++....  ......  +.....-+.++.+.+|.++.+ ..+|
T Consensus       189 ~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG  268 (412)
T 1ajs_A          189 HACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVG  268 (412)
T ss_dssp             ESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSCCGGGCEE
T ss_pred             ECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccCCCCcceE
Confidence            89999999999   456789999999999999999998764321  011111  111111237788999988763 3478


Q ss_pred             EEEEe--Cchh---HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--------HHHHHHHHH
Q 010842          324 CLWVK--QPGL---LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--------VLNLQSHIR  390 (499)
Q Consensus       324 ~l~~r--~~~~---l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~  390 (499)
                      ++++.  +++.   +...+.....+..                 .+   ...+..+++...+.        .+.+++..+
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~  328 (412)
T 1ajs_A          269 NLTVVAKEPDSILRVLSQMQKIVRVTW-----------------SN---PPAQGARIVARTLSDPELFHEWTGNVKTMAD  328 (412)
T ss_dssp             EEEEECSSHHHHHHHHHHHHHHHHTTT-----------------SS---CCSHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCHHHHHHHHHHHHHHHhccc-----------------CC---CChHHHHHHHHHHcCcchhHHHHHHHHHHHH
Confidence            88882  4432   1111110000000                 00   01233333333332        236677888


Q ss_pred             HHHHHHHHHHHHHhcCC---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEE
Q 010842          391 SDIRLAKMFEGFVKSDP---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRF  467 (499)
Q Consensus       391 ~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi  467 (499)
                      +..++++++.+.|++.+   ++++.. +..+.+.|.  ...          ...+...+.+.|+ ++.+       .+|+
T Consensus       329 ~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~--~~~----------~~~~~~~l~~~gv-~v~~-------~~Ri  387 (412)
T 1ajs_A          329 RILSMRSELRARLEALKTPGTWNHIT-DQIGMFSFT--GLN----------PKQVEYLINQKHI-YLLP-------SGRI  387 (412)
T ss_dssp             HHHHHHHHHHHHHHHTTCSSCCHHHH-HCCSSEEEC--CCC----------HHHHHHHHHTTCE-ECCT-------TSEE
T ss_pred             HHHHHHHHHHHHHHhhCCCCCeeEEc-CCCceEEEe--CCC----------HHHHHHHHHhCCE-EecC-------CcEE
Confidence            88899999999999874   365543 333333332  111          2233344456674 3333       2699


Q ss_pred             eccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          468 AVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       468 ~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +++ . .+++++++++++|+++.+++
T Consensus       388 s~~-~-~~~~~i~~~~~~l~~~l~~~  411 (412)
T 1ajs_A          388 NMC-G-LTTKNLDYVATSIHEAVTKI  411 (412)
T ss_dssp             EGG-G-CCTTTHHHHHHHHHHHHHHC
T ss_pred             Eee-e-CCHHHHHHHHHHHHHHHHhc
Confidence            986 2 48899999999999987653

>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*

Probab=99.83  E-value=6.9e-18  Score=172.29  Aligned_cols=313  Identities=12%  Similarity=0.072  Sum_probs=184.1

Q ss_pred             HHHHHHHHHHHc-CCCC-ccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          131 EIVVMDWLATML-KLPK-TFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       131 E~~~~~~la~l~-g~~~-~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      ..++.+.+++++ | +. +       ..++|+||++|+..++..++... .       ++.+|+.+...|.+...++...
T Consensus        86 ~~~l~~~la~~~~~-~~~~-------~v~~~~g~~~a~~~~~~~a~~~~-~-------~~~vi~~~p~y~~~~~~~~~~~  149 (426)
T 1sff_A           86 YLELCEIMNQKVPG-DFAK-------KTLLVTTGSEAVENAVKIARAAT-K-------RSGTIAFSGAYHGRTHYTLALT  149 (426)
T ss_dssp             HHHHHHHHHHHSSC-SSCE-------EEEEESSHHHHHHHHHHHHHHHH-T-------CCEEEEETTCCCCSSHHHHHHS
T ss_pred             HHHHHHHHHHhCCc-cccc-------EEEEeCchHHHHHHHHHHHHHhh-C-------CCeEEEECCCcCCCchHhhhhc
Confidence            344455578877 5 22 2       36999999999999988654321 1       3434444455566676777776


Q ss_pred             CCC--------C--CCeEEeeCCC---CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHH
Q 010842          209 GVS--------P--ANIRALPTSV---DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEV  271 (499)
Q Consensus       209 G~g--------~--~~v~~v~~~~---~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~i  271 (499)
                      |..        .  ..++.+|++.   +..+.+|+++|++++++.. .+..+.+|+++...+++|.+.+    +++|.++
T Consensus       150 g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l  228 (426)
T 1sff_A          150 GKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDA-APEDIAAIVIEPVQGEGGFYASSPAFMQRLRAL  228 (426)
T ss_dssp             SCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTC-CGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHH
T ss_pred             CCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHHHhcc-CCCceEEEEEecccCCCCcccCCHHHHHHHHHH
Confidence            651        0  1277788753   1134689999999987410 0112445655443334997777    9999999


Q ss_pred             HHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCC
Q 010842          272 ANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSES  351 (499)
Q Consensus       272 a~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~  351 (499)
                      |++||+++++|++|+++....+.......++ ..|.++  .+|+++....+|+++.+++  +.+.+...    ..     
T Consensus       229 ~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~di~s--~sK~~~~GlriG~~~~~~~--~~~~l~~~----~~-----  294 (426)
T 1sff_A          229 CDEHGIMLIADEVQSGAGRTGTLFAMEQMGV-APDLTT--FAKSIAGGFPLAGVTGRAE--VMDAVAPG----GL-----  294 (426)
T ss_dssp             HHHHTCEEEEECTTTTTTTTSSSSGGGGTTS-CCSEEE--ECGGGGTSSCCEEEEEEHH--HHTTSCTT----SB-----
T ss_pred             HHHcCCEEEEechhhccCcccchhhhhhcCC-CCCEEE--EcccccCCCceEEEEEcHH--HHhhhccC----Cc-----
Confidence            9999999999999986432111111011122 267664  4699985455799988753  22222110    00     


Q ss_pred             CCcccCCCcccCCCCCCCcHH---HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEe
Q 010842          352 NSVVDFKDWQVGTGRRFKSLR---LWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRL  424 (499)
Q Consensus       352 ~~~~~~~~~~~~~sr~~~al~---~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~  424 (499)
                                 ..+.....+.   +..+++.+..+   ++.++..++++++.+.|++    .+.+..+ ++..+++++.+
T Consensus       295 -----------~~~~~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~  359 (426)
T 1sff_A          295 -----------GGTYAGNPIACVAALEVLKVFEQE---NLLQKANDLGQKLKDGLLAIAEKHPEIGDV-RGLGAMIAIEL  359 (426)
T ss_dssp             -----------CCSSSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHTCTTEEEE-EEETTEEEEEE
T ss_pred             -----------CcCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEEEEEE
Confidence                       0011112333   33344444322   3556667777777777765    4444333 23456777777


Q ss_pred             cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .+...... .......++.++|.++|+.+..+..  ...++|+++. ..++++++++++++|+++.+++
T Consensus       360 ~~~~~~~~-~~~~~~~~l~~~l~~~gi~v~~~~~--~~~~iRi~~~-~~~~~~~i~~~~~~l~~~l~~~  424 (426)
T 1sff_A          360 FEDGDHNK-PDAKLTAEIVARARDKGLILLSCGP--YYNVLRILVP-LTIEDAQIRQGLEIISQCFDEA  424 (426)
T ss_dssp             BGGGCTTS-BCHHHHHHHHHHHHHTTEECEEEST--TSCEEEECCC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred             ecCccccC-CChHHHHHHHHHHHHCCcEEecCCC--CCCEEEEECC-ccCCHHHHHHHHHHHHHHHHHH
Confidence            42100000 0022356788888888854433322  2467999984 6789999999999999988765

>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1

Probab=99.82  E-value=1.6e-19  Score=183.77  Aligned_cols=357  Identities=9%  Similarity=-0.022  Sum_probs=215.5

Q ss_pred             HHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHH-HcccC-CcccccChhhHHHHHHHHHHHHHHcCC--
Q 010842           69 FETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCA-CFNSV-GFNWLASPASTELEIVVMDWLATMLKL--  144 (499)
Q Consensus        69 ~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~-~~n~~-~~~~~~~p~~~~lE~~~~~~la~l~g~--  144 (499)
                      ...+.+.+.+.-.+......+..++++..... ++..+.+.+.. .+... ...|...++..++++++.+|+.+..|.  
T Consensus        16 ~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~-~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~   94 (412)
T 1yaa_A           16 LFGIKQRYGQDQRATKVDLGIGAYRDDNGKPW-VLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDAL   94 (412)
T ss_dssp             THHHHHHHHTCCCSSCEECSSCCCBCTTSCBC-CCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHH
T ss_pred             HHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCC-CcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCC
Confidence            34555555443123334444444444432223 33445555555 55422 234555566788999988887665553  


Q ss_pred             CCccccCCCccEEE--cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeC-C
Q 010842          145 PKTFMFSGTGGGVI--QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPT-S  221 (499)
Q Consensus       145 ~~~~~~~~~~~g~~--t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~-~  221 (499)
                      +.+       ..++  |+|||+|+..++...+..  .       ++..|+++.++|.++...++..|.   +++.+|. +
T Consensus        95 ~~~-------~i~~~~t~g~~~a~~~~~~~~~~~--~-------~gd~Vl~~~p~~~~~~~~~~~~g~---~~~~v~~~~  155 (412)
T 1yaa_A           95 QED-------RVISVQSLSGTGALHISAKFFSKF--F-------PDKLVYLSKPTWANHMAIFENQGL---KTATYPYWA  155 (412)
T ss_dssp             HTT-------CEEEEEEEHHHHHHHHHHHHHHHH--C-------TTCCEEEEESCCTTHHHHHHTTTC---CEEEEECEE
T ss_pred             Ccc-------eEEEEeccchHhHHHHHHHHHHHh--C-------CCCEEEEeCCCCccHHHHHHHcCc---eEEEEeeec
Confidence            122       3578  999999988775433221  0       455688888999999999999999   9999998 5


Q ss_pred             CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC---ChhHHHHHHHHhCCEEEeeccccchhccC--ccch
Q 010842          222 VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD---NVEPLAEVANEYGIWVHVDAAYAGSACIC--PEFR  296 (499)
Q Consensus       222 ~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~--~~~~  296 (499)
                      ++ ++.+|+++|++++++.   .....+++.+.++|+||.+-   ++++|+++|++||+++++|++|+++....  ....
T Consensus       156 ~~-~~~~d~~~l~~~l~~~---~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~  231 (412)
T 1yaa_A          156 NE-TKSLDLNGFLNAIQKA---PEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAY  231 (412)
T ss_dssp             TT-TTEECHHHHHHHHHHS---CTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTH
T ss_pred             CC-CCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhH
Confidence            33 4689999999999753   11124556699999999995   46788999999999999999997654321  0111


Q ss_pred             hh--hcCCCC---CceeEecccccccCC-CcceEEE--E----eCchh---HHHhhcCCccCCCCCCCCCCCcccCCCcc
Q 010842          297 HY--LNGIER---VDSFSFSPHKWLLSY-LDCCCLW--V----KQPGL---LVKALSTDPEYLKNKPSESNSVVDFKDWQ  361 (499)
Q Consensus       297 ~~--~~g~~~---aDsi~~~~hK~l~~p-~~~g~l~--~----r~~~~---l~~~~~~~~~yl~~~~~~~~~~~~~~~~~  361 (499)
                      ..  +.....   -+.++.+.+|.++.+ ..+|+++  .    +++..   +.+.+.....+..                
T Consensus       232 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~----------------  295 (412)
T 1yaa_A          232 AVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEV----------------  295 (412)
T ss_dssp             HHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTT----------------
T ss_pred             HHHHHHhcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhcc----------------
Confidence            11  111111   246677889998742 3368887  4    24331   2222211000000                


Q ss_pred             cCCCCCCCcHHHHHHHHHhc--------HHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEEcCCCceEEEEEecCCCCC
Q 010842          362 VGTGRRFKSLRLWMVLRSYG--------VLNLQSHIRSDIRLAKMFEGFVKSDP---RFEIVVPRHFALVCFRLNPYPHS  430 (499)
Q Consensus       362 ~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~  430 (499)
                         + ....+...++...+.        .+.++++.++..++++++.+.|++.+   ++++.. +..+.+.|.  ...  
T Consensus       296 ---~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~~~~~~--~~~--  366 (412)
T 1yaa_A          296 ---S-NPPAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIV-NQCGMFSFT--GLT--  366 (412)
T ss_dssp             ---S-SCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHH-HCCSSEEEC--CCC--
T ss_pred             ---C-CCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeec-cCceEEEee--CCC--
Confidence               0 001233333333331        24677888888889999999998864   365543 333444432  211  


Q ss_pred             CcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          431 GSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       431 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                              ...+...+.+.|+. +.+       ++|++++ . .+++++++++++|+++.+.
T Consensus       367 --------~~~~~~~l~~~gi~-v~~-------~~Ris~~-~-~~~~~i~~~~~~l~~~~~~  410 (412)
T 1yaa_A          367 --------PQMVKRLEETHAVY-LVA-------SGRASIA-G-LNQGNVEYVAKAIDEVVRF  410 (412)
T ss_dssp             --------HHHHHHHHHHHCEE-CCT-------TSEEEGG-G-CCTTTHHHHHHHHHHHHHH
T ss_pred             --------HHHHHHHHHhCCEE-ecc-------CcEEEEc-c-CCHhHHHHHHHHHHHHHHh
Confidence                    12343334456743 333       4899996 2 5899999999999988764

>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B

Probab=99.82  E-value=3.1e-19  Score=181.07  Aligned_cols=283  Identities=16%  Similarity=0.142  Sum_probs=185.5

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK  203 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k  203 (499)
                      .|...++|+.    +++++|.+..         +++++|++|+..++. ...           ++..|+++...|.+...
T Consensus        66 ~p~~~~l~~~----la~~~g~~~~---------i~~~sG~~ai~~~~~-l~~-----------~gd~Vl~~~~~y~~~~~  120 (403)
T 3cog_A           66 NPTRNCLEKA----VAALDGAKYC---------LAFASGLAATVTITH-LLK-----------AGDQIICMDDVYGGTNR  120 (403)
T ss_dssp             CHHHHHHHHH----HHHHHTCSEE---------EEESCHHHHHHHHHT-TSC-----------TTCEEEEESSCCHHHHH
T ss_pred             CchHHHHHHH----HHHHhCCCcE---------EEECCHHHHHHHHHH-HhC-----------CCCEEEEeCCCcchHHH
Confidence            4666677776    7777887643         677778888877765 321           45678889999987555


Q ss_pred             H----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC-CE
Q 010842          204 V----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG-IW  278 (499)
Q Consensus       204 a----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~-~~  278 (499)
                      .    ++..|+   +++.+|.+       |+++|+++|+++      +.+|++..++|++|.+.|+++|+++|+++| ++
T Consensus       121 ~~~~~~~~~G~---~v~~v~~~-------d~~~l~~~i~~~------t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~  184 (403)
T 3cog_A          121 YFRQVASEFGL---KISFVDCS-------KIKLLEAAITPE------TKLVWIETPTNPTQKVIDIEGCAHIVHKHGDII  184 (403)
T ss_dssp             HHHHTGGGGTC---EEEEECTT-------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCE
T ss_pred             HHHHHHHHcCC---EEEEECCC-------CHHHHHHhcCcC------CeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCE
Confidence            4    356788   88888864       789999888653      347888999999999999999999999999 99


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      +++|++|+.+....+    .  . -.+|.++.+.||+++.|.+  +|+++.+++.... .+.......            
T Consensus       185 livD~~~~~~~~~~~----~--~-~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~-~l~~~~~~~------------  244 (403)
T 3cog_A          185 LVVDNTFMSPYFQRP----L--A-LGADISMYSATKYMNGHSDVVMGLVSVNCESLHN-RLRFLQNSL------------  244 (403)
T ss_dssp             EEEECTTTCTTTCCT----T--T-TTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHH-HHHHHHHHH------------
T ss_pred             EEEECCCcccccCCc----c--c-cCCeEEEEcChhhccCCCCCeEEEEEECcHHHHH-HHHHHHHhc------------
Confidence            999999987653221    1  1 1489999999999998876  5888887654322 211100000            


Q ss_pred             CCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE--------------EcC---CCceE
Q 010842          357 FKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEI--------------VVP---RHFAL  419 (499)
Q Consensus       357 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~--------------~~~---~~~~~  419 (499)
                              +-....+..|+.++.+  +.+..++++..+++..+.+.+++.|.++-              ..+   ...++
T Consensus       245 --------g~~~~~~~~~~~~~~l--~~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~  314 (403)
T 3cog_A          245 --------GAVPSPIDCYLCNRGL--KTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGM  314 (403)
T ss_dssp             --------CCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSE
T ss_pred             --------CCCCCHHHHHHHHhhh--hHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceE
Confidence                    0011245666666554  44566677777777777777776654332              111   12567


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEE------------ee-----eE-------CC--EEEEEEeccCCC
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLT------------HT-----IV-------GG--LYMLRFAVGASL  473 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~------------~~-----~~-------~g--~~~lRi~~~~~~  473 (499)
                      ++|.+.+.        ..   ...+.+.+.|.+...            +.     ..       .|  ..++|++++ ..
T Consensus       315 ~~~~l~~~--------~~---~~~~~l~~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg-~e  382 (403)
T 3cog_A          315 VTFYIKGT--------LQ---HAEIFLKNLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVG-LE  382 (403)
T ss_dssp             EEEEESSC--------HH---HHHHHHHHCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECC-SS
T ss_pred             EEEEecCC--------HH---HHHHHHHhCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeC-CC
Confidence            88876532        11   222333334542211            10     00       02  468999996 66


Q ss_pred             CcHHHHHHHHHHHHHH
Q 010842          474 TDERHVVAAWELIMEG  489 (499)
Q Consensus       474 ~t~~di~~l~~~l~~~  489 (499)
                      +++++|+.+.++|+++
T Consensus       383 ~~~d~i~~l~~al~~~  398 (403)
T 3cog_A          383 DEEDLLEDLDQALKAA  398 (403)
T ss_dssp             CHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHh
Confidence            7777788777777654

>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}

Probab=99.82  E-value=3.5e-19  Score=182.19  Aligned_cols=318  Identities=12%  Similarity=-0.012  Sum_probs=195.9

Q ss_pred             ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH--HHHHHHHHHHHhH--hhhhccCCeEEEcCC
Q 010842          120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL--VTLIAARDRALDA--VGAENMHKLVVYGSD  195 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~--~al~~ar~~~~~~--~~~~g~~~~~i~~s~  195 (499)
                      .|....+..+++++    ++++++.+.+       ..++|+|+++++.  .++.+..+.. +.  ......++..|+++.
T Consensus        73 ~Y~~~~g~~~lr~~----ia~~~~~~~~-------~i~~t~G~~~al~~~~~~~~l~~~~-~g~~~~~~~~~gd~V~v~~  140 (427)
T 3ppl_A           73 NYGGLDGIVDIRQI----WADLLGVPVE-------QVLAGDASSLNIMFDVISWSYIFGN-NDSVQPWSKEETVKWICPV  140 (427)
T ss_dssp             SSCCSSCCHHHHHH----HHHHHTSCGG-------GEEECSSCHHHHHHHHHHHHHHHCC-TTCSSCGGGSSCCEEEEEE
T ss_pred             CCCCCCCcHHHHHH----HHHHhCCCcc-------eEEEeCCcHHHHHHHHHHHHHhccC-CcccccccCCCCCEEEEcC
Confidence            34444455667776    5555577654       4689999999884  5555443200 00  000000156788999


Q ss_pred             CCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEe-cCCCcccccCChh---HHHHH
Q 010842          196 QTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCAT-VGTTSTTAVDNVE---PLAEV  271 (499)
Q Consensus       196 ~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t-~gtt~~G~id~l~---~I~~i  271 (499)
                      ++|.++...++..|.   +++.||++++   .+|+++|+++++.     ..+.+|+++ .++|+||.+-|.+   +|+++
T Consensus       141 p~y~~~~~~~~~~g~---~~~~v~~~~~---g~d~~~l~~~l~~-----~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~  209 (427)
T 3ppl_A          141 PGYDRHFSITERFGF---EMISVPMNED---GPDMDAVEELVKN-----PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAM  209 (427)
T ss_dssp             SCCHHHHHHHHHTTC---EEEEEEEETT---EECHHHHHHHTTS-----TTEEEEEECCSSCTTTCCCCCHHHHHHHHHC
T ss_pred             CCcHHHHHHHHHcCC---EEEEeCCCCC---CCCHHHHHHHHhc-----CCCeEEEECCCCCCCCCccCCHHHHHHHHHH
Confidence            999999999999999   9999999864   3999999998832     123355545 7899999998777   88888


Q ss_pred             H-HHhCCEEEeeccccchhccCcc-----chhhh--cCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccC
Q 010842          272 A-NEYGIWVHVDAAYAGSACICPE-----FRHYL--NGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEY  343 (499)
Q Consensus       272 a-~~~~~~lhvD~A~g~~~~~~~~-----~~~~~--~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~y  343 (499)
                      | ++||+++|+|++|+.+.+....     ...+.  .+....+.+..+.+|++..+..+|+++.+.. .. ..+.....+
T Consensus       210 a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~r~G~~~~~~~-l~-~~~~~~~~~  287 (427)
T 3ppl_A          210 ETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKITLAGAGVSFFLTSAE-NR-KWYTGHAGI  287 (427)
T ss_dssp             CCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTSCTTSSCEEEECCHH-HH-HHHHHHHHH
T ss_pred             HhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhccCcCccEEEEEcCHH-HH-HHHHHHhhc
Confidence            8 9999999999999875332111     11110  1223356788899999666677888776532 22 222111000


Q ss_pred             CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHH----hcCCCeEEEcC
Q 010842          344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-----LNLQSHIRSDIRLAKMFEGFV----KSDPRFEIVVP  414 (499)
Q Consensus       344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~~a~~l~~~L----~~~~~~~~~~~  414 (499)
                      .                    +.....+..+++...+..     +.+++..+...+..+.+.+.|    ...+++++..+
T Consensus       288 ~--------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~p  347 (427)
T 3ppl_A          288 R--------------------GIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSRLAEYGVAQWTVP  347 (427)
T ss_dssp             H--------------------CSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCCEECCC
T ss_pred             c--------------------cCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCceEEeCC
Confidence            0                    011123444444444432     223344444444444555544    44445766555


Q ss_pred             CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee-E-----CCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI-V-----GGLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~-----~g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      .....+++.+....          ..++.+.+.++|+.+..++. +     .+..++|++++ . .++++|++++++|.+
T Consensus       348 ~~g~~~~~~~~~~~----------~~~~~~~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~-~-~~~~~i~~~~~~l~~  415 (427)
T 3ppl_A          348 AGGYFISLDVVPGT----------ASRVAELAKEAGIALTGAGSSYPLRQDPENKNLRLAPS-L-PPVEELEVAMDGVAT  415 (427)
T ss_dssp             SBSSCEEEECSTTC----------HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCS-S-SCHHHHHHHHHHHHH
T ss_pred             CccEEEEEECCcch----------HHHHHHHHHHCCCEEecCcCcCCCCCCCCCCeEEEECC-C-CCHHHHHHHHHHHHH
Confidence            45555666664421          35567777778854433121 1     24578999995 3 389999999999999


Q ss_pred             HHHHHh
Q 010842          489 GADRLF  494 (499)
Q Consensus       489 ~~~~l~  494 (499)
                      +.+++.
T Consensus       416 ~l~~~~  421 (427)
T 3ppl_A          416 CVLLAA  421 (427)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            887764

>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A

Probab=99.82  E-value=2e-18  Score=175.06  Aligned_cols=304  Identities=14%  Similarity=0.072  Sum_probs=184.1

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-C-CeEEEcCCCCchhHHHHHH
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-H-KLVVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~-~~~i~~s~~~H~s~~ka~~  206 (499)
                      ....++.+++++++|.+.         .++|+|||+|+..++.+++......    |. + +.+|+.+...|.+...+..
T Consensus        81 ~~~~~l~~~la~~~~~~~---------v~~~~gg~~a~~~al~~~~~~~~~~----~~~g~~~vi~~~~~y~~~~~~~~~  147 (406)
T 4adb_A           81 EPVLRLAKKLIDATFADR---------VFFCNSGAEANEAALKLARKFAHDR----YGSHKSGIVAFKNAFHGRTLFTVS  147 (406)
T ss_dssp             HHHHHHHHHHHHHSSCSE---------EEEESSHHHHHHHHHHHHHHHHHHH----TCTTCCEEEEETTCCCCSSHHHHH
T ss_pred             HHHHHHHHHHHhhCCCCe---------EEEeCcHHHHHHHHHHHHHHHHHhc----CCCCCcEEEEECCCcCCCcHHHhh
Confidence            345566777999998653         4999999999999998876532111    11 2 3344444445555555555


Q ss_pred             HhCCCC---------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc-----CChhHHHHHH
Q 010842          207 LAGVSP---------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV-----DNVEPLAEVA  272 (499)
Q Consensus       207 ~~G~g~---------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i-----d~l~~I~~ia  272 (499)
                      ..|...         .++..+|.       .|+++|+++++++      +.+|+++ +++++|.+     +++++|+++|
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~  213 (406)
T 4adb_A          148 AGGQPAYSQDFAPLPADIRHAAY-------NDINSASALIDDS------TCAVIVE-PIQGEGGVVPASNAFLQGLRELC  213 (406)
T ss_dssp             HSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHTTCSTT------EEEEEEC-SEETTTTSEECCHHHHHHHHHHH
T ss_pred             ccCCccccccCCCCCCCceEeCC-------CcHHHHHHHhcCC------eEEEEEe-CCcCCCCCccCCHHHHHHHHHHH
Confidence            544210         13333332       4899999988633      3467777 88888854     5799999999


Q ss_pred             HHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCC
Q 010842          273 NEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESN  352 (499)
Q Consensus       273 ~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~  352 (499)
                      ++||+++|+|++|+++............++ ..|.+++  +|+++....+|+++.+++  +.+.+...   ...      
T Consensus       214 ~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~d~~t~--sK~~~~G~r~G~~~~~~~--~~~~~~~~---~~~------  279 (406)
T 4adb_A          214 NRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPDLLTT--AKALGGGFPVGALLATEE--CARVMTVG---THG------  279 (406)
T ss_dssp             HHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECHH--HHHTCCTT---SSC------
T ss_pred             HHcCCEEEEeccccCCCccchhHHHHhcCC-CCCEEEe--chhhcCCCCeEEEEEcHH--HHhhhccC---CcC------
Confidence            999999999999986432221111112232 2677766  999985556888877543  22222111   000      


Q ss_pred             CcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEEcCCCceEEEEEecCCC
Q 010842          353 SVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PRFEIVVPRHFALVCFRLNPYP  428 (499)
Q Consensus       353 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~~~  428 (499)
                                 .+.....+...+++..+..-..++..++..++++++.+.|++.    +.+.-. +....++.+.+....
T Consensus       280 -----------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~  347 (406)
T 4adb_A          280 -----------TTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEV-RGLGLLIGCVLNADY  347 (406)
T ss_dssp             -----------CSSTTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEECTTT
T ss_pred             -----------CCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceEE-EEEEEEEEEEEeCCc
Confidence                       0011123444444433321111566777788888888888764    222111 123345666665421


Q ss_pred             CCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhccC
Q 010842          429 HSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGS  497 (499)
Q Consensus       429 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~~  497 (499)
                             .....++.+.|.++|..+..    .+..++|+++ +..+|++|+++++++|+++.+++.++.
T Consensus       348 -------~~~~~~~~~~l~~~gi~v~~----~~~~~iRi~~-~~~~~~e~i~~~~~~l~~~l~~~~~~~  404 (406)
T 4adb_A          348 -------AGQAKQISQEAAKAGVMVLI----AGGNVVRFAP-ALNVSEEEVTTGLDRFAAACEHFVSRG  404 (406)
T ss_dssp             -------TTCHHHHHHHHHHTTEECEE----SSTTEEEECC-CTTCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred             -------HHHHHHHHHHHHHCCcEEee----cCCCeEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence                   01145677888888854433    2356799987 477899999999999999998876543

>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}

Probab=99.82  E-value=4.1e-18  Score=175.32  Aligned_cols=356  Identities=11%  Similarity=0.034  Sum_probs=215.5

Q ss_pred             CHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHc---ccCCcccccChhhHHHHHHHHHHHHHHcCC
Q 010842           68 SFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACF---NSVGFNWLASPASTELEIVVMDWLATMLKL  144 (499)
Q Consensus        68 ~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~---n~~~~~~~~~p~~~~lE~~~~~~la~l~g~  144 (499)
                      ..-.+.+.+...-.+..++.....|+.+-..++..++ +.+.+....   ......|...++..++.+++.+|+   +|.
T Consensus        35 ~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a-v~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l---~g~  110 (448)
T 3meb_A           35 AILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPA-VKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLM---FGK  110 (448)
T ss_dssp             TTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHH-HHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHH---HCT
T ss_pred             hHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHH-HHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHh---cCC
Confidence            4456666666554444455555556555444443444 334333333   123345666667778888866665   366


Q ss_pred             C-----CccccCCCccEEE--cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH----HhCCCCC
Q 010842          145 P-----KTFMFSGTGGGVI--QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK----LAGVSPA  213 (499)
Q Consensus       145 ~-----~~~~~~~~~~g~~--t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~----~~G~g~~  213 (499)
                      +     ++       ..++  |+|||+|+..++......         .++..|+++.++|.++...++    ..|+   
T Consensus       111 ~~~~~~~~-------~i~~~~t~ggt~al~l~~~~~~~~---------~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~---  171 (448)
T 3meb_A          111 DSKAAQEG-------RIASCQSLSGTGSLHIGFEFLHLW---------MPKAEFYMPSTTWPNHYGIYDKVFNKLKV---  171 (448)
T ss_dssp             TCHHHHTT-------CEEEEEESHHHHHHHHHHHHHHHH---------CTTCCEEEESSCCTHHHHHHHHHHCTTTS---
T ss_pred             CccccCcC-------cEEEEECCcHHHHHHHHHHHHHHh---------CCCCEEEECCCCCHhHHHHHHhhHHhCCC---
Confidence            5     22       3577  999999987654322111         045678899999999999999    8999   


Q ss_pred             CeEEeeC-CCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEEeeccccchh
Q 010842          214 NIRALPT-SVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSA  289 (499)
Q Consensus       214 ~v~~v~~-~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~  289 (499)
                      +++.+|+ ++++++.+|+++|++++++.   .....+++.+.++|+||.+-+   +++|+++|++||+++++|++|+++.
T Consensus       172 ~v~~~~~~~~~~~~~~d~e~l~~~l~~~---~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~  248 (448)
T 3meb_A          172 PYKEYTYLRKDGELEIDFSNTKKDIQSA---PEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFA  248 (448)
T ss_dssp             CCEEECCBCTTSCSSBCHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTS
T ss_pred             eEEEEeccccccCCCcCHHHHHHHHHhC---CCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEeccccccc
Confidence            9999998 54324799999999999752   122457788899999999966   5569999999999999999998765


Q ss_pred             ccCc-----cchhhhcCCCCCceeEecccccccCC-CcceEE--EE--------eCch---hHHHhhcCCccCCCCCCCC
Q 010842          290 CICP-----EFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCL--WV--------KQPG---LLVKALSTDPEYLKNKPSE  350 (499)
Q Consensus       290 ~~~~-----~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l--~~--------r~~~---~l~~~~~~~~~yl~~~~~~  350 (499)
                      ....     ...... ....-..++.+++|.++.| ..+|++  +.        .++.   .+...+.....+...    
T Consensus       249 ~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~----  323 (448)
T 3meb_A          249 TGSFEADAFAVRMFV-DAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWS----  323 (448)
T ss_dssp             SSCHHHHTHHHHHHH-HTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTS----
T ss_pred             CCCcccCchhHHHHh-hcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccC----
Confidence            3221     011111 1112335688899999754 447877  45        3431   121111110000000    


Q ss_pred             CCCcccCCCcccCCCCCCCcHHHHHHHHHhcH--------HHHHHHHHHHHHHHHHHHHHHhcC--CC------eEEEcC
Q 010842          351 SNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV--------LNLQSHIRSDIRLAKMFEGFVKSD--PR------FEIVVP  414 (499)
Q Consensus       351 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~--------~g~~~~~~~~~~~a~~l~~~L~~~--~~------~~~~~~  414 (499)
                                      ....+..+++...+..        +.++++.++..++++++.+.|+++  |+      ++.. .
T Consensus       324 ----------------~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~-~  386 (448)
T 3meb_A          324 ----------------MSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHI-L  386 (448)
T ss_dssp             ----------------SCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHH-H
T ss_pred             ----------------CccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCccccccee-C
Confidence                            0113344444444322        346777788889999999999886  44      4333 2


Q ss_pred             CCceEEEEEecCCCCCCcchhHHHHHHHHHHH-HhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWV-NSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      |..+.+.|.  +..           .++..++ .+.|+ ++.++.      .|++++ . .++++|++++++|.++.+++
T Consensus       387 ~~~g~~~~~--~~~-----------~~~~~~ll~~~gV-~v~~G~------gRis~a-~-~~~~~i~~~~~~l~~~l~~~  444 (448)
T 3meb_A          387 TAIGMFTFT--GLT-----------PEHVDYLKEKWSI-YLVKAG------GRMSMC-G-LTESNCDYVAEAIHDAVTKL  444 (448)
T ss_dssp             HCCSSEEEC--CCC-----------HHHHHHHHHHHCE-EECSGG------GEEEGG-G-CCTTTHHHHHHHHHHHHHHS
T ss_pred             CCceEEEec--CCC-----------HHHHHHHHHhCCE-EEeCCC------cEEEEe-c-CCHHHHHHHHHHHHHHHHhc
Confidence            333334432  211           2334444 34464 444422      299985 2 35567999999999988754

>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}

Probab=99.82  E-value=3.2e-18  Score=173.14  Aligned_cols=300  Identities=13%  Similarity=0.037  Sum_probs=180.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC-chhHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT-HSTFAKVCK  206 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~-H~s~~ka~~  206 (499)
                      .....++.+++++++|. +        ..++++|||+|+..++.+++......    |.++..|++...+ |.+...+..
T Consensus        77 ~~~~~~l~~~la~~~~~-~--------~v~~~~gg~ea~~~al~~~~~~~~~~----g~~~~~vi~~~~~yhg~~~~~~~  143 (395)
T 3nx3_A           77 NENIAAAAKNLAKASAL-E--------RVFFTNSGTESIEGAMKTARKYAFNK----GVKGGQFIAFKHSFHGRTLGALS  143 (395)
T ss_dssp             CHHHHHHHHHHHHHHTC-S--------EEEEESSHHHHHHHHHHHHHHHHHHT----TCTTCEEEEETTCCCCSSHHHHT
T ss_pred             CHHHHHHHHHHHHhcCC-C--------eEEEeCCHHHHHHHHHHHHHHHhhcc----CCCCCEEEEEcCCcCCCCHHHHh
Confidence            45666677789999883 2        25999999999999998887542211    1233445554444 444433332


Q ss_pred             HhCC---------CCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHH
Q 010842          207 LAGV---------SPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVAN  273 (499)
Q Consensus       207 ~~G~---------g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~  273 (499)
                      ..+-         -..++..+|.+       |+++|+++++++      +.+|++...++++|.+.|    +++|+++|+
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~-------d~~~l~~~l~~~------~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~  210 (395)
T 3nx3_A          144 LTANEKYQKPFKPLISGVKFAKYN-------DISSVEKLVNEK------TCAIILESVQGEGGINPANKDFYKALRKLCD  210 (395)
T ss_dssp             TCCCHHHHGGGCSCCSCEEEECTT-------CHHHHHTTCCTT------EEEEEEESEECTTSCEECCHHHHHHHHHHHH
T ss_pred             hcCCcccccccCCCCCCcEEeCCC-------CHHHHHHhccCC------eEEEEEeCccCCCCcccCCHHHHHHHHHHHH
Confidence            2220         00145555532       799999988633      346777777788899877    999999999


Q ss_pred             HhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842          274 EYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS  353 (499)
Q Consensus       274 ~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~  353 (499)
                      +||+++|+|++|.++......+.....++ ..|.++++  |.++.+..+|+++.+++. +.+.+...   ...       
T Consensus       211 ~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~~~~G~~~G~~~~~~~~-~~~~~~~~---~~~-------  276 (395)
T 3nx3_A          211 EKDILLIADEIQCGMGRSGKFFAYEHAQI-LPDIMTSA--KALGCGLSVGAFVINQKV-ASNSLEAG---DHG-------  276 (395)
T ss_dssp             HHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGTTTSCCEEEEECHHH-HHHHSCTT---CCS-------
T ss_pred             HcCCEEEEEecccCCCcCCcchhHHhcCC-CCCEEEec--ccccCCCceEEEEEchhh-hhhhcCCc---ccC-------
Confidence            99999999999986532211111111222 26777765  888777788988876542 12333211   000       


Q ss_pred             cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEcCCCceEEEEEecCCCC
Q 010842          354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVK----SDPRFEIVVPRHFALVCFRLNPYPH  429 (499)
Q Consensus       354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~----~~~~~~~~~~~~~~~v~f~~~~~~~  429 (499)
                                .+.....+...+++..+..-.-++..++..++.+++++.|+    +.|.+..+ ++..+++.+.+.... 
T Consensus       277 ----------~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~~-  344 (395)
T 3nx3_A          277 ----------STYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDFCKKR-KGLGFMQGLSLDKSV-  344 (395)
T ss_dssp             ----------SCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEEEEEECTTS-
T ss_pred             ----------CCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EeEEEEEEEEeCCcc-
Confidence                      01111344444444443211112344555555555555554    45655443 334456667665421 


Q ss_pred             CCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          430 SGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       430 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                              ...++.+.|.++|..+...    +..++|+++ +..+|++|+++++++|+++.++
T Consensus       345 --------~~~~~~~~l~~~Gi~v~~~----~~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~  394 (395)
T 3nx3_A          345 --------KVAKVIQKCQENALLLISC----GENDLRFLP-PLILQKEHIDEMSEKLRKALKS  394 (395)
T ss_dssp             --------CHHHHHHHHHHTTEECEEE----TTTEEEECC-CTTCCHHHHHHHHHHHHHHHHT
T ss_pred             --------hHHHHHHHHHHCCCEEecC----CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHh
Confidence                    1456777888888544332    346799998 4778999999999999988653

>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*

Probab=99.82  E-value=5.3e-19  Score=179.26  Aligned_cols=305  Identities=15%  Similarity=0.055  Sum_probs=187.2

Q ss_pred             ccccChhhHHHHHHHHHHHHHHcC-CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCc
Q 010842          120 NWLASPASTELEIVVMDWLATMLK-LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTH  198 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l~g-~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H  198 (499)
                      .|...++..++++++.+++.  .| .+.+       ..++|+|+++++..++... .           ++..|+++.++|
T Consensus        70 ~y~~~~g~~~lr~~la~~l~--~g~~~~~-------~v~~~~G~~~al~~~~~~~-~-----------~gd~Vl~~~p~y  128 (400)
T 3asa_A           70 GYGPDFGLPALRQKLSEDFY--RGFVDAK-------EIFISDGAKVDLFRLLSFF-G-----------PNQTVAIQDPSY  128 (400)
T ss_dssp             CCCCTTCCHHHHHHHHHTTS--TTSSCGG-------GEEEESCHHHHHHHHHHHH-C-----------SSCEEEEEESCC
T ss_pred             CCCCCCCCHHHHHHHHHHHH--cCCCCHH-------HEEEccChHHHHHHHHHHc-C-----------CCCEEEECCCCc
Confidence            45444566777777444432  56 4433       4689999999876643221 1           456788888999


Q ss_pred             hhHHHHHHHhCCCCCC-eEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHH
Q 010842          199 STFAKVCKLAGVSPAN-IRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANE  274 (499)
Q Consensus       199 ~s~~ka~~~~G~g~~~-v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~  274 (499)
                      .++..+++..|.   . ++.+|.++++.+..|++++           ..+.+|+++.++|+||.+-|   +++|+++|++
T Consensus       129 ~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~l~~~-----------~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~  194 (400)
T 3asa_A          129 PAYLDIARLTGA---KEIIALPCLQENAFFPEFPED-----------THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIE  194 (400)
T ss_dssp             HHHHHHHHHTTC---SEEEEEECCGGGTTCCCCCTT-----------CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCC---cceEecccchhcCcccChhhc-----------cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHH
Confidence            999999999999   8 9999987554455553221           12446777789999999976   6678999999


Q ss_pred             hCCEEEeeccccchhccCccchhhhcCCC---CCceeEecccccccCC-CcceEEEEeCchh------HHHhhcCCccCC
Q 010842          275 YGIWVHVDAAYAGSACICPEFRHYLNGIE---RVDSFSFSPHKWLLSY-LDCCCLWVKQPGL------LVKALSTDPEYL  344 (499)
Q Consensus       275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~---~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~------l~~~~~~~~~yl  344 (499)
                      +|+++++|++|+.+... +.....+..+.   ..+.+..+.+|+++.| ..+|+++++++..      +...........
T Consensus       195 ~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (400)
T 3asa_A          195 HEILILFDAAYSTFISD-PSLPKSIFEIPDARFCAIEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTT  273 (400)
T ss_dssp             TTCEEEEECTTGGGCCC-TTSCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHH
T ss_pred             cCCEEEEEchhhhhhcC-CCCCCchhhCCCCCCceEEEecchhhcCCcchheeEEeeChhhccchhhhHHHHHHHHhccC
Confidence            99999999999865321 11111111221   2347788999999744 4579988765431      111110000000


Q ss_pred             CCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEE-
Q 010842          345 KNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFR-  423 (499)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~-  423 (499)
                                         .+ ....+...++...+....+++..++..++++++.+.|++. ++++..+...+.++++ 
T Consensus       274 -------------------~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~  332 (400)
T 3asa_A          274 -------------------FN-GASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLAT-GFEVFGGEHAPYLWVKP  332 (400)
T ss_dssp             -------------------CC-CCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT-TCEEEECSSSSEEEEEC
T ss_pred             -------------------cc-CCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHC-CCeeeCCCCceEEEEec
Confidence                               00 0122333333333322246677788888999999999987 7887755445666676 


Q ss_pred             ecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          424 LNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +....  +       ..++.++|.++ |+.+..+..+.  +..++|+++.   ++++++++++++|+++.++.
T Consensus       333 ~~~~~--~-------~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~---~~~e~i~~~l~~l~~~~~~~  393 (400)
T 3asa_A          333 TQANI--S-------DRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSL---GKREDILAACERLQMAPALQ  393 (400)
T ss_dssp             CCTTC--C-------TTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECC---SCHHHHHHHHHHHHC-----
T ss_pred             cCCCC--C-------HHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEee---CCHHHHHHHHHHHHHHHHhh
Confidence            43210  0       12355556544 75444333332  3467999953   68999999999998887654

>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*

Probab=99.82  E-value=4.1e-19  Score=179.48  Aligned_cols=319  Identities=13%  Similarity=0.046  Sum_probs=197.4

Q ss_pred             HHHHHHHHHHccc-CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEE--cCChHHHHHHHHHHHHHHHHhH
Q 010842          104 GFLGEMLCACFNS-VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVI--QNTTSDSILVTLIAARDRALDA  180 (499)
Q Consensus       104 ~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~--t~ggt~A~~~al~~ar~~~~~~  180 (499)
                      ..+.+.+...+.. ....|....+..++++++.+|+... +.+.+       ..++  |+|||+|+..++.+.+...   
T Consensus        47 ~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~-~~~~~-------~v~~~~~~g~~~a~~~~~~~~~~~~---  115 (394)
T 2ay1_A           47 RAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGD-GLKSE-------TTATLATVGGTGALRQALELARMAN---  115 (394)
T ss_dssp             HHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGG-GCCGG-------GEEEEEEEHHHHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCC-CCCcc-------cEEEEecCCchhHHHHHHHHHHhcC---
Confidence            3445555544322 2334555566788888877766322 22333       3467  9999999998887765321   


Q ss_pred             hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842          181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT  260 (499)
Q Consensus       181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G  260 (499)
                            ++..|+++..+|.++...++..|.   +++.+|.+..+++.+|+++|++++++.   .....+++.+.++|+||
T Consensus       116 ------~gd~vl~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~~~~~~~~nptG  183 (394)
T 2ay1_A          116 ------PDLRVFVSDPTWPNHVSIMNFMGL---PVQTYRYFDAETRGVDFEGMKADLAAA---KKGDMVLLHGCCHNPTG  183 (394)
T ss_dssp             ------TTCCEEEEESCCHHHHHHHHHHTC---CEEEEECEETTTTEECHHHHHHHHHTC---CTTCEEEEESSSCTTTC
T ss_pred             ------CCCEEEEcCCCChhHHHHHHHcCC---ceEEEecccccCCccCHHHHHHHHHhC---CCCCEEEEeCCCCCCCC
Confidence                  345688888999999999999999   999999863234789999999998642   11235677799999999


Q ss_pred             ccCC---hhHHHHHHHHhCCEEEeeccccchhccC--c--cchhhhcCCCCCceeEecccccccCC-CcceEEEE--eCc
Q 010842          261 AVDN---VEPLAEVANEYGIWVHVDAAYAGSACIC--P--EFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWV--KQP  330 (499)
Q Consensus       261 ~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~--~--~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~--r~~  330 (499)
                      .+-|   +++|+++|++||+++++|++|+++....  +  ..... .....-..+..+.+|+++.| ..+|++++  +++
T Consensus       184 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~  262 (394)
T 2ay1_A          184 ANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLI-ASRIPEVLIAASCSKNFGIYRERTGCLLALCADA  262 (394)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHH-HHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSH
T ss_pred             CCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHH-hhcCCCEEEEEeccCCCcCcCCccceEEEEeCCH
Confidence            9965   6688999999999999999998754310  0  01111 11111235577889999743 44699887  344


Q ss_pred             hhH---HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--------HHHHHHHHHHHHHHHHHH
Q 010842          331 GLL---VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--------VLNLQSHIRSDIRLAKMF  399 (499)
Q Consensus       331 ~~l---~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l  399 (499)
                      +.+   ...+...   ....              ..+   ...+..+++...+.        .+.++++.++..++++++
T Consensus       263 ~~~~~l~~~~~~~---~~~~--------------~~~---~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l  322 (394)
T 2ay1_A          263 ATRELAQGAMAFL---NRQT--------------YSF---PPFHGAKIVSTVLTTPELRADWMAELEAVRSGMLRLREQL  322 (394)
T ss_dssp             HHHHHHHHHHHHH---HHTT--------------TSS---CCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH---Hhhh--------------cCC---CChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            321   1111100   0000              000   02233333333331        246777788888889999


Q ss_pred             HHHHhcCC---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcH
Q 010842          400 EGFVKSDP---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDE  476 (499)
Q Consensus       400 ~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~  476 (499)
                      .+.|++..   ++++..+.....+.+.+ +            ...+.+.+.+.|+. +.+       .+|+++.  .+++
T Consensus       323 ~~~L~~~~~~~~~~~~~~~~g~~~~~~~-~------------~~~~~~~l~~~gi~-v~~-------~~Ris~~--~~~~  379 (394)
T 2ay1_A          323 AGELRDLSGSDRFGFVAEHRGMFSRLGA-T------------PEQVKRIKEEFGIY-MVG-------DSRINIA--GLND  379 (394)
T ss_dssp             HHHHHHHHTSSTTTHHHHCCSSEEECCC-C------------HHHHHHHHHHHCEE-CCT-------TCEEEGG--GCCT
T ss_pred             HHHHHhcCCCCCeeEEcCCceEEEeeCC-C------------HHHHHHHHHhCCEE-ecC-------CCeEEee--cCCH
Confidence            99888763   35544322222322222 1            12344555566743 333       2699985  3789


Q ss_pred             HHHHHHHHHHHHH
Q 010842          477 RHVVAAWELIMEG  489 (499)
Q Consensus       477 ~di~~l~~~l~~~  489 (499)
                      +++++++++|+++
T Consensus       380 ~~i~~~~~~l~~~  392 (394)
T 2ay1_A          380 NTIPILARAIIEV  392 (394)
T ss_dssp             TTHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHc
Confidence            9999999999876

>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*

Probab=99.81  E-value=1.8e-17  Score=170.00  Aligned_cols=320  Identities=13%  Similarity=-0.013  Sum_probs=189.3

Q ss_pred             hhhHHHHHHHHHHHHHHcCCCC-ccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842          125 PASTELEIVVMDWLATMLKLPK-TFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK  203 (499)
Q Consensus       125 p~~~~lE~~~~~~la~l~g~~~-~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k  203 (499)
                      ........++.++++++++... +       ..++|+|||+|+..++.+++... +       ++.+|+.....|.+...
T Consensus        82 ~~~~~~~~~l~~~la~~~~~~~~~-------~v~~~~ggsea~~~al~~~~~~~-~-------~~~vi~~~~~yhg~~~~  146 (439)
T 3dxv_A           82 SASNAPAVTLAERLLASFPGEGTH-------KIWFGHSGSDANEAAYRAIVKAT-G-------RSGVIAFAGAYHGCTVG  146 (439)
T ss_dssp             SSEEHHHHHHHHHHHHTTTCTTTE-------EEEEESSHHHHHHHHHHHHHHHH-S-------CCEEEEETTCCCCSSHH
T ss_pred             ccCCHHHHHHHHHHHHhCCCCCCC-------EEEEeCCHHHHHHHHHHHHHHHh-C-------CCEEEEECCCCCCCcHH
Confidence            3445677788888999985432 2       35999999999999999886432 0       34455556666777666


Q ss_pred             HHHHhCCCC-----------CCeEEeeCCCCCCCcc-----CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---
Q 010842          204 VCKLAGVSP-----------ANIRALPTSVDANFSL-----SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---  264 (499)
Q Consensus       204 a~~~~G~g~-----------~~v~~v~~~~~~~~~~-----d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---  264 (499)
                      ++...|...           ..+..+|.+..  +..     |+++|+++|++  .....+.+|++...++++|.+.|   
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~le~~l~~--~~~~~~~~vi~~p~~~~~G~~~~~~~  222 (439)
T 3dxv_A          147 SMAFSGHSVQADAAKADGLILLPYPDPYRPY--RNDPTGDAILTLLTEKLAA--VPAGSIGAAFIEPIQSDGGLIVPPDG  222 (439)
T ss_dssp             HHCC-------------CEEEECCCCSSSCB--TTBTTSHHHHHHHHHHHHT--SCTTCEEEEEECSSBSTTTSBCCCTT
T ss_pred             HHhhcCCCchhhccccCCCCCCcEEcCCCcc--cccccHHHHHHHHHHHHHh--cCCCCEEEEEEccccCCCCCccCCHH
Confidence            655544310           01234454321  122     79999999851  11234567777777888999988   


Q ss_pred             -hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccC
Q 010842          265 -VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEY  343 (499)
Q Consensus       265 -l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~y  343 (499)
                       +++|+++|++||+++++|++|+++............++ ..|.+++  .|.++..+..|+++.+.+  +.+.+...   
T Consensus       223 ~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~-~~di~s~--sK~~~~G~riG~~~~~~~--~~~~~~~~---  294 (439)
T 3dxv_A          223 FLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGF-VPDILVL--GKGLGGGLPLSAVIAPAE--ILDCASAF---  294 (439)
T ss_dssp             HHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTC-CCSEEEE--CGGGGTTSCCEEEEEEHH--HHTSCSSS---
T ss_pred             HHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCC-CCCEEEE--cchhcCCcceEEEEECHH--HHhhhcCC---
Confidence             99999999999999999999986422111111111222 2677755  599886566888887643  22222110   


Q ss_pred             CCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceE
Q 010842          344 LKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFAL  419 (499)
Q Consensus       344 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~  419 (499)
                      .                 ...+. ...+.+.+++..+..-.-+++.++..++.+++++.|++    .|.+..+ ++...+
T Consensus       295 ~-----------------~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~  355 (439)
T 3dxv_A          295 A-----------------MQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAKRHPLIGDI-RGRGLA  355 (439)
T ss_dssp             S-----------------CCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTE
T ss_pred             C-----------------cCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEE
Confidence            0                 00111 23444444444432111134555666666666666654    4555443 334455


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      +.+.+.... ...........++.+.+.++|..+....  ....++|+++. ...|++++++++++|+++.+++.
T Consensus       356 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~~  426 (439)
T 3dxv_A          356 CGMELVCDR-QSREPARAETAKLIYRAYQLGLVVYYVG--MNGNVLEFTPP-LTITETDIHKALDLLDRAFSELS  426 (439)
T ss_dssp             EEEEEEEET-TTTEECHHHHHHHHHHHHHHTEECEEES--TTSCEEEECCC-TTCCHHHHHHHHHHHHHHHHTGG
T ss_pred             EEEEEecCc-cccCCCHHHHHHHHHHHHHCCcEEeecC--CCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHHh
Confidence            556553211 0000013345677888888886543332  12367999984 77899999999999999987763

>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*

Probab=99.81  E-value=2.8e-18  Score=175.04  Aligned_cols=300  Identities=13%  Similarity=0.092  Sum_probs=185.2

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEc-CCCCchhHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYG-SDQTHSTFAKVC  205 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~-s~~~H~s~~ka~  205 (499)
                      .....++.+++++++|.+         ..++|+|||+|+..++.+++......    |. .+..|++ +...|.+...++
T Consensus        98 ~~~~~~l~~~la~~~g~~---------~v~~~~ggteA~~~al~~~~~~~~~~----~~~g~~~vi~~~~~yh~~~~~~~  164 (420)
T 2pb2_A           98 NEPALRLGRKLIDATFAE---------RVLFMNSGTEANETAFKLARHYACVR----HSPFKTKIIAFHNAFHGRSLFTV  164 (420)
T ss_dssp             CHHHHHHHHHHHHHSSCS---------EEEEESSHHHHHHHHHHHHHHHHHHH----TCTTCCEEEEETTCCCCSSHHHH
T ss_pred             CHHHHHHHHHHHhhCCCC---------eEEEeCCHHHHHHHHHHHHHHHhhhc----cCCCCCEEEEEeCCcCCcCHHHH
Confidence            345566667788888843         24999999999999999887532111    11 2224444 445566666666


Q ss_pred             HHhCCC-------C--CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc----cCChhHHHHHH
Q 010842          206 KLAGVS-------P--ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA----VDNVEPLAEVA  272 (499)
Q Consensus       206 ~~~G~g-------~--~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~----id~l~~I~~ia  272 (499)
                      ...|..       .  ..+..+|.       .|+++|+++|+++      +.+|+++.+++++|.    .+++++|.++|
T Consensus       165 ~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~~~------~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~  231 (420)
T 2pb2_A          165 SVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMDDH------TCAVVVEPIQGEGGVQAATPEFLKGLRDLC  231 (420)
T ss_dssp             HHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHH
T ss_pred             HhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHhccC------ceEEEEeCCcCCCCeecCCHHHHHHHHHHH
Confidence            666541       0  02445543       2899999988642      446777766666675    37899999999


Q ss_pred             HHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCC
Q 010842          273 NEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESN  352 (499)
Q Consensus       273 ~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~  352 (499)
                      ++||+++++|++|.++......+.....++ ..|.+++  +|+++.+..+|+++++++  +.+.+...    ...     
T Consensus       232 ~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~-~~diit~--sK~l~~G~~iG~~~~~~~--l~~~l~~~----~~~-----  297 (420)
T 2pb2_A          232 DEHQALLVFDEVQCGMGRTGDLFAYMHYGV-TPDILTS--AKALGGGFPVSAMLTTQE--IASAFHVG----SHG-----  297 (420)
T ss_dssp             HHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSCCEEEEECHH--HHTTCC--------C-----
T ss_pred             HHcCCEEEEEcCCcCcccCCcHHHHHhcCC-CCCeEEe--cccccCCCceEEEEEhHH--HHHhhcCC----CcC-----
Confidence            999999999999976432111111111233 3687765  699986677999988763  32222110    000     


Q ss_pred             CcccCCCcccCCCCCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEEcCCCceEEEEEec
Q 010842          353 SVVDFKDWQVGTGRRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PRFEIVVPRHFALVCFRLN  425 (499)
Q Consensus       353 ~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~  425 (499)
                             .+.    ....+...   .+++.+..   +++.++..++++++.+.|+++    |.+..+ ++...++.+.+.
T Consensus       298 -------~t~----~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~v~~~  362 (420)
T 2pb2_A          298 -------STY----GGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQFDIFSDI-RGMGLLIGAELK  362 (420)
T ss_dssp             -------CEE----CCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE-EEETTEEEEEEC
T ss_pred             -------ccc----CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecceEEEEEEC
Confidence                   001    11233333   34444432   456777778888888888764    433322 334456667664


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      ...       .....++.+.|.++|..+. +.   +..++|+++. ..+|++|+++++++|+++.+++.
T Consensus       363 ~~~-------~~~~~~l~~~l~~~Gi~v~-~~---~~~~iRl~~~-~~~t~eei~~~~~~l~~~l~~~~  419 (420)
T 2pb2_A          363 PKY-------KGRARDFLYAGAEAGVMVL-NA---GADVMRFAPS-LVVEEADIHEGMQRFAQAVGKVV  419 (420)
T ss_dssp             GGG-------TTCHHHHHHHHHHTTEECE-ES---STTEEEECCC-TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCc-------hHHHHHHHHHHHHCCCEEE-eC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHHh
Confidence            310       0014567778888885433 32   2457999973 67899999999999999887764

>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*

Probab=99.81  E-value=2.3e-18  Score=174.24  Aligned_cols=233  Identities=15%  Similarity=0.162  Sum_probs=164.8

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      ..|...++|+.    ++++.|.+.         .+++++|++|+.. +.....           ++..|+++...|.+..
T Consensus        65 ~~p~~~~l~~~----la~l~g~~~---------~~~~~sG~~Ai~~-~~~l~~-----------~gd~Vi~~~~~y~~~~  119 (400)
T 3nmy_A           65 HNPTRFAYERC----VAALEGGTR---------AFAFASGMAATST-VMELLD-----------AGSHVVAMDDLYGGTF  119 (400)
T ss_dssp             CCHHHHHHHHH----HHHHHTCSE---------EEEESSHHHHHHH-HHTTSC-----------TTCEEEEESSCCHHHH
T ss_pred             CCHHHHHHHHH----HHHHhCCCC---------EEEecCHHHHHHH-HHHHcC-----------CCCEEEEeCCCchHHH
Confidence            45666666666    888888764         3888888888775 322111           4567888889998665


Q ss_pred             HHHH-----HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842          203 KVCK-----LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI  277 (499)
Q Consensus       203 ka~~-----~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~  277 (499)
                      ..+.     ..|+   +++.++.+       |+++|+++|+++      +.+|++..++|++|.+.|+++|+++|++||+
T Consensus       120 ~~~~~~~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~e~~~np~G~~~~l~~i~~la~~~g~  183 (400)
T 3nmy_A          120 RLFERVRRRTAGL---DFSFVDLT-------DPAAFKAAIRAD------TKMVWIETPTNPMLKLVDIAAIAVIARKHGL  183 (400)
T ss_dssp             HHHHHTHHHHHCC---EEEEECTT-------SHHHHHHHCCTT------EEEEEEESSCTTTCCCCCHHHHHHHHHHTTC
T ss_pred             HHHHHhhHhhcCe---EEEEECCC-------CHHHHHHHhccC------CCEEEEECCCCCCCeeecHHHHHHHHHHcCC
Confidence            5543     3588   88888764       889999988654      3488889999999999999999999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC--cce-EEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL--DCC-CLWVKQPGLLVKALSTDPEYLKNKPSESNSV  354 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~--~~g-~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  354 (499)
                      ++++|++|+.+....+.    ..   ++|.++.+.+|+++.|.  -+| ++++++++.. +.+.....+           
T Consensus       184 ~livDe~~~~~~~~~~~----~~---g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~-~~l~~~~~~-----------  244 (400)
T 3nmy_A          184 LTVVDNTFASPMLQRPL----SL---GADLVVHSATKYLNGHSDMVGGIAVVGDNAELA-EQMAFLQNS-----------  244 (400)
T ss_dssp             EEEEECTTTHHHHCCGG----GG---TCSEEEEETTTTTTCSSSCCCEEEEECSCHHHH-HHHHHHHHH-----------
T ss_pred             EEEEECCCcccccCChh----hc---CCcEEEecCccccCCCCCcceeEEEEeCCHHHH-HHHHHHHHh-----------
Confidence            99999999865443221    11   48999999999998773  245 4555555433 222111000           


Q ss_pred             ccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC-----------------c
Q 010842          355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH-----------------F  417 (499)
Q Consensus       355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-----------------~  417 (499)
                               .+.....+..|+.++.+  +.+..++++..++++++.+.|++.|.++-+..|.                 .
T Consensus       245 ---------~g~~~~~~~a~~~l~~l--~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G  313 (400)
T 3nmy_A          245 ---------IGGVQGPFDSFLALRGL--KTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFG  313 (400)
T ss_dssp             ---------HCCBCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCC
T ss_pred             ---------cCCCCCHHHHHHHHHhH--hHHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCC
Confidence                     11122456677777654  6678889999999999999999999887553332                 3


Q ss_pred             eEEEEEecC
Q 010842          418 ALVCFRLNP  426 (499)
Q Consensus       418 ~~v~f~~~~  426 (499)
                      .+++|.+.+
T Consensus       314 ~~~~~~l~~  322 (400)
T 3nmy_A          314 GIVSIVLKG  322 (400)
T ss_dssp             SEEEEEETT
T ss_pred             ceEEEEeCC
Confidence            578888754

>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3

Probab=99.81  E-value=1.3e-19  Score=186.62  Aligned_cols=282  Identities=14%  Similarity=0.148  Sum_probs=181.6

Q ss_pred             HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH----H
Q 010842          130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV----C  205 (499)
Q Consensus       130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka----~  205 (499)
                      ..+++.+++++++|.+.         .+++++|++|+..++. ..    .       ++..|+++...|.++...    +
T Consensus       134 ~~~~l~~~la~~~g~~~---------~i~~~sGt~al~~~l~-~~----~-------~Gd~Vi~~~~~y~~~~~~~~~~~  192 (464)
T 1ibj_A          134 TRDALESLLAKLDKADR---------AFCFTSGMAALSAVTH-LI----K-------NGEEIVAGDDVYGGSDRLLSQVV  192 (464)
T ss_dssp             HHHHHHHHHHHHHTCSE---------EEEESSHHHHHHHHHT-TS----C-------TTCEEEEESSCCHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHhCCCe---------EEEECCHHHHHHHHHH-Hh----C-------CCCEEEEECCCchhHHHHHHHHH
Confidence            56778888999999763         3888899988765543 11    1       466788899999888764    4


Q ss_pred             HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842          206 KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY  285 (499)
Q Consensus       206 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~  285 (499)
                      +..|.   +++.+|.+       |+++|+++|+++      +.+|+++.++|++|.+.|+++|+++|++||+++++|++|
T Consensus       193 ~~~G~---~v~~v~~~-------d~~~l~~~i~~~------tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~  256 (464)
T 1ibj_A          193 PRSGV---VVKRVNTT-------KLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSI  256 (464)
T ss_dssp             GGGTC---EEEEECTT-------SHHHHHHHCCSS------EEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTT
T ss_pred             HHcCC---EEEEeCCC-------CHHHHHHHhccC------ceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCC
Confidence            56788   88888763       889999988643      458889999999999999999999999999999999999


Q ss_pred             cchhccCccchhhhcCCCCCceeEecccccccCCCcc--eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842          286 AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC--CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVG  363 (499)
Q Consensus       286 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~--g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~  363 (499)
                      +.+....+.     . . ++|.++.++||++++|.|+  |+++++++... +.+.....+.                   
T Consensus       257 ~~g~~~~~~-----~-~-~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~-~~l~~~~~~~-------------------  309 (464)
T 1ibj_A          257 MSPVLSRPL-----E-L-GADIVMHSATKFIAGHSDVMAGVLAVKGEKLA-KEVYFLQNSE-------------------  309 (464)
T ss_dssp             TCTTTCCGG-----G-T-TCSEEEEETTTTTTCSSCCCCEEEEECSHHHH-HHHHHHHHHT-------------------
T ss_pred             cccccCChh-----h-c-CCEEEEECCcccccCCCCCcEEEEEEChHHHH-HHHHHHHHhc-------------------
Confidence            765332111     1 1 4899999999999988765  99988864432 2221100000                   


Q ss_pred             CCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc--------------CCCeEEEcCC---CceEEEEEecC
Q 010842          364 TGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS--------------DPRFEIVVPR---HFALVCFRLNP  426 (499)
Q Consensus       364 ~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~--------------~~~~~~~~~~---~~~~v~f~~~~  426 (499)
                       +.....+..|++++.+  +.+..+.++..+++..+.+.|++              +|++++..+.   ..++++|.+.+
T Consensus       310 -g~~~~~~~~~a~~~al--~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~  386 (464)
T 1ibj_A          310 -GSGLAPFDCWLCLRGI--KTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGS  386 (464)
T ss_dssp             -TCBCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSC
T ss_pred             -CCCCCHHHHHHHHhch--hhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECC
Confidence             0011245566666554  23333344444444444444443              3444443322   24678887732


Q ss_pred             CCCCCcchhHHHHHHHHHHHHhcCCEEEEee------------e---------ECC--EEEEEEeccCCCCcHHHHHHHH
Q 010842          427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHT------------I---------VGG--LYMLRFAVGASLTDERHVVAAW  483 (499)
Q Consensus       427 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~------------~---------~~g--~~~lRi~~~~~~~t~~di~~l~  483 (499)
                               .....++.+.|...|+.+..+.            .         ..|  ..++|+++. .    +|+++++
T Consensus       387 ---------~~~~~~~~~~L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg-~----edi~~li  452 (464)
T 1ibj_A          387 ---------VALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAG-I----EDVDDLI  452 (464)
T ss_dssp             ---------HHHHHHHHHHCSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECC-S----SCHHHHH
T ss_pred             ---------HHHHHHHHHhcCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeC-C----CCHHHHH
Confidence                     1223456666544432211110            0         011  357999996 2    7899999


Q ss_pred             HHHHHHHHH
Q 010842          484 ELIMEGADR  492 (499)
Q Consensus       484 ~~l~~~~~~  492 (499)
                      +.|+++.++
T Consensus       453 ~~L~~al~~  461 (464)
T 1ibj_A          453 SDLDIAFKT  461 (464)
T ss_dssp             HHHHHHHHS
T ss_pred             HHHHHHHhh
Confidence            999988654

>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}

Probab=99.81  E-value=1.8e-18  Score=176.55  Aligned_cols=316  Identities=12%  Similarity=0.008  Sum_probs=193.9

Q ss_pred             ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH-HHHHHHHHHHHhHhhhhcc------CCeEEE
Q 010842          120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL-VTLIAARDRALDAVGAENM------HKLVVY  192 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~-~al~~ar~~~~~~~~~~g~------~~~~i~  192 (499)
                      .|....+..+++++    +++++|.+.+       ..++|+|++++++ ..+..+...  +  ...|.      ++..|+
T Consensus        71 ~Y~~~~G~~~lr~~----ia~~~~~~~~-------~i~~t~G~~~al~l~~~~~~l~~--~--~~~g~~~~~~~d~~~Vl  135 (422)
T 3d6k_A           71 NYGGLLGIADIREL----WAEALGLPAD-------LVVAQDGSSLNIMFDLISWSYTW--G--NNDSSRPWSAEEKVKWL  135 (422)
T ss_dssp             SSCCSSCCHHHHHH----HHHHHTCCGG-------GEEECSSCHHHHHHHHHHHHHHH--C--CTTCSSCGGGSSCCEEE
T ss_pred             CCCCCCCCHHHHHH----HHHHhCCChh-------HEEEecchHHHHHHHHHHHHhcC--c--ccccccccccCCCCEEE
Confidence            56555557777777    5555577654       4688999999873 333222211  0  00000      123688


Q ss_pred             cCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEE-EecCCCcccccCChh---HH
Q 010842          193 GSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLC-ATVGTTSTTAVDNVE---PL  268 (499)
Q Consensus       193 ~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv-~t~gtt~~G~id~l~---~I  268 (499)
                      ++.++|..+..+++..|.   +++.+|++++   .+|+++|++++++.     .+.+|+ ...++|+||.+-+.+   +|
T Consensus       136 ~~~p~y~~~~~~~~~~g~---~~~~v~~~~~---g~d~~~l~~~l~~~-----~~~~v~~~~~~~NPtG~~~~~~~l~~l  204 (422)
T 3d6k_A          136 CPVPGYDRHFTITEHFGF---EMINVPMTDE---GPDMGVVRELVKDP-----QVKGMWTVPVFGNPTGVTFSEQTCREL  204 (422)
T ss_dssp             EEESCCHHHHHHHHHHTC---EEEEEEEETT---EECHHHHHHHHTST-----TEEEEEECCSSCTTTCCCCCHHHHHHH
T ss_pred             EeCCccHHHHHHHHHcCC---EEEecCCCCC---CCCHHHHHHHHhcC-----CCeEEEEcCCCCCCCCCCCCHHHHHHH
Confidence            889999999999999999   9999999864   39999999988531     233555 678899999998776   78


Q ss_pred             HHHHH-HhCCEEEeeccccchhccCc--cchhhh-----cCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC
Q 010842          269 AEVAN-EYGIWVHVDAAYAGSACICP--EFRHYL-----NGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD  340 (499)
Q Consensus       269 ~~ia~-~~~~~lhvD~A~g~~~~~~~--~~~~~~-----~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~  340 (499)
                      +++|+ +||+++++|++|+...+..+  ......     .+....+.+..+++|++.....+|+++.+. +.. +.+...
T Consensus       205 ~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~GlriG~~~~~~-~l~-~~l~~~  282 (422)
T 3d6k_A          205 AEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKITHAGSGVSFFASSK-ENI-EWYASH  282 (422)
T ss_dssp             HHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTTSCTTSSCEEEECCH-HHH-HHHHHH
T ss_pred             HHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhhcCcccceEEEEeCH-HHH-HHHHHH
Confidence            88888 99999999999974211111  111110     122235677888999944335689988763 222 222211


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHh----cCCCeEE
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-----LNLQSHIRSDIRLAKMFEGFVK----SDPRFEI  411 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~~~~~~~~a~~l~~~L~----~~~~~~~  411 (499)
                      .....                    .....+...++...+..     +.+++..++..+..+++.+.|.    +.+++++
T Consensus       283 ~~~~~--------------------~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~l~~~~~~~~  342 (422)
T 3d6k_A          283 ANVRG--------------------IGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSRLSEYGVAKW  342 (422)
T ss_dssp             HHHHC--------------------SCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             HHhhc--------------------CCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCceEE
Confidence            00000                    01123444555555533     2344444444445555555554    3444666


Q ss_pred             EcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee-E-----CCEEEEEEeccCCCCcHHHHHHHHHH
Q 010842          412 VVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI-V-----GGLYMLRFAVGASLTDERHVVAAWEL  485 (499)
Q Consensus       412 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~-----~g~~~lRi~~~~~~~t~~di~~l~~~  485 (499)
                      ..+.....+++.+....          ...+.+.+.++|+.+...+. +     .+..++|+++. . ++++++++++++
T Consensus       343 ~~p~~g~~~~~~~~~~~----------~~~~~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~-~-~~~e~i~~~~~~  410 (422)
T 3d6k_A          343 TSPTGGYFISVDVVPGT----------ASRVVELAKEAGIALTGAGSSFPLHNDPNNENIRLAPS-L-PPVAELEVAMDG  410 (422)
T ss_dssp             CCCSBSSCEEEEESTTC----------HHHHHHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCS-S-SCHHHHHHHHHH
T ss_pred             eCCCcceEEEEECCCCC----------HHHHHHHHHHCCeEEEcCccccCCCCCCCCCeEEEecC-C-CCHHHHHHHHHH
Confidence            54445555666664311          34566677777854433122 2     13578999996 4 899999999999


Q ss_pred             HHHHHHHHhc
Q 010842          486 IMEGADRLFK  495 (499)
Q Consensus       486 l~~~~~~l~~  495 (499)
                      |+++.+++..
T Consensus       411 l~~~l~~~~~  420 (422)
T 3d6k_A          411 FATCVLMAAL  420 (422)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999887654

>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}

Probab=99.80  E-value=1.3e-18  Score=182.66  Aligned_cols=363  Identities=7%  Similarity=0.025  Sum_probs=215.7

Q ss_pred             hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHc-C-CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh
Q 010842          102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATML-K-LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD  179 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~-g-~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~  179 (499)
                      +|.++.++.......  ..+....+..++++++.+++.+.+ + .+...    ....++|+|||+|+..++.+...+..-
T Consensus       117 ~~~~v~a~~~~~~~~--~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~----~~~i~~t~G~t~al~~~~~~l~~~~l~  190 (533)
T 3f6t_A          117 RDKVVAEWVNGAVAN--NYPVPDRCLVNTEKIINYFLQELSYKDANLAE----QTDLFPTEGGTAAIVYAFHSLAENHLL  190 (533)
T ss_dssp             HHHHHHHHHHHHHTC--SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGG----GEEEEEEEHHHHHHHHHHHHHHHTTSS
T ss_pred             CcHHHHHHHHHHHhC--CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCC----cceEEEECCHHHHHHHHHHHhhhhhcc
Confidence            566776666555432  122345577899999999997773 3 32110    014689999999998887763221100


Q ss_pred             HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC--CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC
Q 010842          180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV--DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT  257 (499)
Q Consensus       180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~--~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt  257 (499)
                            .++..|+++..+|.++..+++..|.   .++.+|++.  +.++.+|+++|++++.++      +.+|+++.++|
T Consensus       191 ------~~gd~Viv~~p~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~d~~~l~~~l~~~------~k~v~l~~p~N  255 (533)
T 3f6t_A          191 ------KKGDKIAINEPIFTPYLRIPELKDY---ELVEVDLHSYEKNDWEIEPNEIEKLKDPS------IKALIVVNPTN  255 (533)
T ss_dssp             ------CTTCEEEEESSCCHHHHTSGGGGGS---EEEEECCCEETTTTSEECHHHHHHHSCTT------EEEEEEESSCT
T ss_pred             ------CCcCEEEEcCCCcHHHHHHHHHcCC---eEEEEEecCCcccCCCCCHHHHHHHhCCC------CeEEEEeCCCC
Confidence                  1467899999999999999999999   999999864  445899999999988543      34788889999


Q ss_pred             cccccCChh---HHHHHHH-HhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchh
Q 010842          258 STTAVDNVE---PLAEVAN-EYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGL  332 (499)
Q Consensus       258 ~~G~id~l~---~I~~ia~-~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~  332 (499)
                      ++|.+-+.+   +|+++|+ +||+++++|.+|+.+..........   ....+.++.+.+|.++.| ..+|+++.++...
T Consensus       256 PtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~---~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~  332 (533)
T 3f6t_A          256 PTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSV---VPYNTMLVYSYSKLFGCTGWRLGVIALNEKNV  332 (533)
T ss_dssp             TTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHH---SGGGEEEEEESHHHHTCGGGCEEEEEEESSCH
T ss_pred             CCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhc---CCCCEEEEecCcccCCCcccceEEEEECcHHH
Confidence            999997665   8888888 5899999999998764322221111   123568889999999744 3489998887643


Q ss_pred             HHHhhcCCcc---------CCCCCCCCCCCcccC--------CCcccCCCCCCCcHHHHH----HHHHh--------cHH
Q 010842          333 LVKALSTDPE---------YLKNKPSESNSVVDF--------KDWQVGTGRRFKSLRLWM----VLRSY--------GVL  383 (499)
Q Consensus       333 l~~~~~~~~~---------yl~~~~~~~~~~~~~--------~~~~~~~sr~~~al~~~~----~l~~~--------g~~  383 (499)
                      +.+....-++         |-.....  .....+        .......+.........+    ++..+        ..+
T Consensus       333 ~~~li~~l~~~~~~~~~~~~~~~~~~--p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~~  410 (533)
T 3f6t_A          333 FDDNIAHLDKVELRQLHKRYSSVVLD--PDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDDP  410 (533)
T ss_dssp             HHHHHHTSCHHHHHHHHHHHHTTCSC--GGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBCH
T ss_pred             HHHHHHhcchhhHHHHHhhhhccccC--cchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchHH
Confidence            3222211100         0000000  000000        000000000111222222    33333        235


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEE-EEecCCCCC-Ccchh------HHHHHHHHHHHH-hcCCEEE
Q 010842          384 NLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVC-FRLNPYPHS-GSADT------EMLNRKLLDWVN-STGRVYL  454 (499)
Q Consensus       384 g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~-f~~~~~~~~-~~~~~------~~~~~~l~~~l~-~~g~~~~  454 (499)
                      .++++.++..++++++.+.|. . ++++. .+..+.+. +.+...... .....      +....++..++. +.|+.+.
T Consensus       411 ~~~~~~~~~~~r~~~l~~~L~-~-~~~~~-~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v~  487 (533)
T 3f6t_A          411 YIDIARKLVSERYDQLHDAMQ-A-PKDET-DTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVLV  487 (533)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT-C-CCCCS-TTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSSC
T ss_pred             HHHHHHHHHHHHHHHHHHhcC-C-Ccccc-CCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEEe
Confidence            567777888888999999997 5 45433 34433333 333210000 00000      001224444444 5676544


Q ss_pred             EeeeEC-CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          455 THTIVG-GLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       455 ~~~~~~-g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      .+..+. +..++|+++++  .++++|++++++|.++.+++.+
T Consensus       488 pg~~f~~~~~~iRls~a~--~~~e~i~~~i~~L~~~l~~~~~  527 (533)
T 3f6t_A          488 DGVGFGAKPGELRVSQAN--LPTEDYALIGKQVLELLKEYYE  527 (533)
T ss_dssp             TTEEECSSTTEEEEESSS--SCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcccCCCCCEEEEEEee--CCHHHHHHHHHHHHHHHHHHHH
Confidence            433332 24689999953  5788999999999999887643

>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...

Probab=99.80  E-value=3.1e-19  Score=180.46  Aligned_cols=320  Identities=12%  Similarity=0.053  Sum_probs=198.7

Q ss_pred             HHHHHHHHHccc-CCcccccChhhHHHHHHHHHHHHHHcCC--CCccccCCCccEEE--cCChHHHHHHHHHHHHHHHHh
Q 010842          105 FLGEMLCACFNS-VGFNWLASPASTELEIVVMDWLATMLKL--PKTFMFSGTGGGVI--QNTTSDSILVTLIAARDRALD  179 (499)
Q Consensus       105 ~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~--~~~~~~~~~~~g~~--t~ggt~A~~~al~~ar~~~~~  179 (499)
                      .+.+.+...+.. ....|...++..++++++.+|+.+..+.  +.+       ..++  |+|||+|+..++.+.+...  
T Consensus        48 ~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~-------~v~~~~~~g~~~a~~~~~~~~~~~~--  118 (396)
T 2q7w_A           48 SVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDK-------RARTAQTPGGTGALRVAADFLAKNT--  118 (396)
T ss_dssp             HHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTT-------CEEEEEESHHHHHHHHHHHHHHHHS--
T ss_pred             HHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHHHhcCCCCccccc-------cEEEEecccchhhHHHHHHHHHHhC--
Confidence            344455544322 2335655666788888877776543222  122       2466  9999999988887654210  


Q ss_pred             HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc
Q 010842          180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST  259 (499)
Q Consensus       180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~  259 (499)
                             ++..|+++..+|..+...++..|.   +++.+|.++.+++.+|+++|++++++.   .....+++.+.++|+|
T Consensus       119 -------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~v~~~~p~npt  185 (396)
T 2q7w_A          119 -------SVKRVWVSNPSWPNHKSVFNSAGL---EVREYAYYDAENHTLDFDALINSLNEA---QAGDVVLFHGCCHNPT  185 (396)
T ss_dssp             -------CCCEEEEEESCCTHHHHHHHHTTC---EEEEEECEETTTTEECHHHHHHHHTTC---CTTCEEEEECSSCTTT
T ss_pred             -------CCCEEEEcCCCchhHHHHHHHcCC---ceEEEecccCCCCCcCHHHHHHHHHhC---CCCCEEEEeCCCCCCC
Confidence                   456788889999999999999999   999999853224789999999998642   1123567789999999


Q ss_pred             cccCC---hhHHHHHHHHhCCEEEeeccccchhccC-ccchhh--hcCCCCCceeEecccccccCC-CcceEEEE--eCc
Q 010842          260 TAVDN---VEPLAEVANEYGIWVHVDAAYAGSACIC-PEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCLWV--KQP  330 (499)
Q Consensus       260 G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~-~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~--r~~  330 (499)
                      |.+-+   +++|+++|++||+++++|++|+++.... ......  +......+.++.+.+|+++.| ..+|++++  +++
T Consensus       186 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~  265 (396)
T 2q7w_A          186 GIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLYNERVGACTLVAADS  265 (396)
T ss_dssp             CCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECSSH
T ss_pred             CCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEeccccccccccccceEEEEcCCH
Confidence            99954   6689999999999999999998754311 011111  111112346788899999743 34788886  344


Q ss_pred             h---hHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--------HHHHHHHHHHHHHHHHHH
Q 010842          331 G---LLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--------VLNLQSHIRSDIRLAKMF  399 (499)
Q Consensus       331 ~---~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l  399 (499)
                      +   .+...+.........                 .   ...+..+++...+.        .+.+++..++..++++++
T Consensus       266 ~~~~~~~~~~~~~~~~~~~-----------------~---~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l  325 (396)
T 2q7w_A          266 ETVDRAFSQMKAAIRANYS-----------------N---PPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLF  325 (396)
T ss_dssp             HHHHHHHHHHHHHHHTTTS-----------------S---CCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhccC-----------------C---CCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            2   122211110000000                 0   12344444444442        245667777888899999


Q ss_pred             HHHHhcCC---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcH
Q 010842          400 EGFVKSDP---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDE  476 (499)
Q Consensus       400 ~~~L~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~  476 (499)
                      .+.|++..   ++++.. |..+.+.+.  ...          ...+.+.+.+.|.. +.+       .+|++++ . .|+
T Consensus       326 ~~~L~~~~~~~~~~~~~-~~~~~~~~~--~~~----------~~~~~~~l~~~gv~-v~~-------~~Ris~~-~-~~~  382 (396)
T 2q7w_A          326 VNTLQEKGANRDFSFII-KQNGMFSFS--GLT----------KEQVLRLREEFGVY-AVA-------SGRVNVA-G-MTP  382 (396)
T ss_dssp             HHHHHHTTCCSCCTHHH-HCCSSEEEC--CCC----------HHHHHHHHHHHCEE-CCT-------TCEEEGG-G-CCT
T ss_pred             HHHHHhcCCCCCcceec-CCCceEEEe--cCC----------HHHHHHHHHhcCee-ecC-------CceEEEe-e-cCH
Confidence            99998874   355442 333334332  111          12344445566743 333       2799996 3 388


Q ss_pred             HHHHHHHHHHHHH
Q 010842          477 RHVVAAWELIMEG  489 (499)
Q Consensus       477 ~di~~l~~~l~~~  489 (499)
                      +++++++++|+++
T Consensus       383 e~i~~~~~~l~~~  395 (396)
T 2q7w_A          383 DNMAPLCEAIVAV  395 (396)
T ss_dssp             TTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999999875

>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*

Probab=99.80  E-value=4.9e-17  Score=166.28  Aligned_cols=309  Identities=9%  Similarity=-0.014  Sum_probs=184.7

Q ss_pred             HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC-CchhHHHHHHHhC
Q 010842          131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ-THSTFAKVCKLAG  209 (499)
Q Consensus       131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~-~H~s~~ka~~~~G  209 (499)
                      ..++.+.++++++.+.+       ..++|+|||+|+..++.+++.....    .|.++..|+++.. .|.+...++...|
T Consensus        88 ~~~l~~~la~~~~~~~~-------~v~~~~ggtea~~~ai~~~~~~~~~----~g~~~~~vi~~~~~yh~~~~~~~~~~~  156 (429)
T 1s0a_A           88 AIELCRKLVAMTPQPLE-------CVFLADSGSVAVEVAMKMALQYWQA----KGEARQRFLTFRNGYHGDTFGAMSVCD  156 (429)
T ss_dssp             HHHHHHHHHHHSCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHH----HTCCCCEEEEETTCCCCSSHHHHTTSC
T ss_pred             HHHHHHHHHHhCCCCCC-------EEEEeCCHHHHHHHHHHHHHHHhcc----cCCCCCeEEEECCCCCCCchhhhhhcC
Confidence            34455668888886543       4699999999999999877642210    0223445555554 4655444444333


Q ss_pred             CC----------CCCeEEeeCCCC---CCC-ccCHHHHHHHHHHHHHcCCccEEEEEecC-CCcccccCC----hhHHHH
Q 010842          210 VS----------PANIRALPTSVD---ANF-SLSPQLLRRAVEADVEAGLVPLFLCATVG-TTSTTAVDN----VEPLAE  270 (499)
Q Consensus       210 ~g----------~~~v~~v~~~~~---~~~-~~d~~~L~~~i~~~~~~g~~p~~vv~t~g-tt~~G~id~----l~~I~~  270 (499)
                      ..          ...+..++++..   +.+ .+|+++|+++|++.   ...+.+|+++.. ++++|.+.|    +++|++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~  233 (429)
T 1s0a_A          157 PDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAH---RHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRK  233 (429)
T ss_dssp             TTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHH---TTTEEEEEECSSEECTTTCEEBCTHHHHHHHH
T ss_pred             CchhhcccccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhC---CCCEEEEEEeecccCCCCcccCCHHHHHHHHH
Confidence            10          114566666421   123 68999999999752   112345665555 688998766    999999


Q ss_pred             HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCc-cCCCCCC
Q 010842          271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDP-EYLKNKP  348 (499)
Q Consensus       271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~-~yl~~~~  348 (499)
                      +|++||+++|+|++|+++............++ ..|.++++  |+++.+ .++|+++.+++ .. +.+.... ..+..  
T Consensus       234 l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~G~~~iG~~~~~~~-~~-~~l~~~~~~~~~~--  306 (429)
T 1s0a_A          234 ICDREGILLIADEIATGFGRTGKLFACEHAEI-APDILCLG--KALTGGTMTLSATLTTRE-VA-ETISNGEAGCFMH--  306 (429)
T ss_dssp             HHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTSSSCCEEEEECHH-HH-HHHHTSTTSSCSC--
T ss_pred             HHHHcCCEEEEeehhhCCcccchHHHhhhcCC-CCCEEEec--ccccCCCccceEEEeCHH-HH-HHhhcCCCccccc--
Confidence            99999999999999976432111111111122 36877765  888877 78999988653 22 3332210 00000  


Q ss_pred             CCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEcCCCceEEEE
Q 010842          349 SESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD---PRFEIVVPRHFALVCF  422 (499)
Q Consensus       349 ~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v~f  422 (499)
                                    ..+.....+...+   +++.+..   ++..++..++++++.+.|+++   |++..+ ++..+++.+
T Consensus       307 --------------~~t~~~n~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~~~g~~~~~  368 (429)
T 1s0a_A          307 --------------GPTFMGNPLACAAANASLAILES---GDWQQQVADIEVQLREQLAPARDAEMVADV-RVLGAIGVV  368 (429)
T ss_dssp             --------------CCTTTTCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHGGGGGCTTEEEE-EEETTEEEE
T ss_pred             --------------CCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHhcCCCEEEE-EEeeEEEEE
Confidence                          0011112333333   3333322   245677778888999888775   566533 233446666


Q ss_pred             EecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          423 RLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       423 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .+....       +  ..++.+.|.++|+. +.+.   + .++|+++. ..+|++|+++++++|+++.+++
T Consensus       369 ~~~~~~-------~--~~~l~~~l~~~Gi~-v~~~---~-~~iRis~~-~~~t~e~i~~~~~~l~~~~~~~  424 (429)
T 1s0a_A          369 ETTHPV-------N--MAALQKFFVEQGVW-IRPF---G-KLIYLMPP-YIILPQQLQRLTAAVNRAVQDE  424 (429)
T ss_dssp             EESSCB-------C--HHHHHHHHHHTTEE-CCCB---T-TEEEECCC-TTCCHHHHHHHHHHHHHHTSSG
T ss_pred             EECCcc-------c--HHHHHHHHHHCCCE-Eecc---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHhh
Confidence            664310       0  34577777777843 3332   2 57999973 6789999999999999876543

>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*

Probab=99.80  E-value=9.7e-18  Score=165.69  Aligned_cols=293  Identities=11%  Similarity=0.059  Sum_probs=193.6

Q ss_pred             HHHHHHHHHHcc-cCCcccccChhhHHHHHHHHHHHHHHcC---CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh
Q 010842          104 GFLGEMLCACFN-SVGFNWLASPASTELEIVVMDWLATMLK---LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD  179 (499)
Q Consensus       104 ~~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g---~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~  179 (499)
                      ..+.+.+...+. .....|.. +...+++++    +++++|   .+.+       ..++|+|+|+|+..++.+.      
T Consensus        35 ~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~----la~~~~~~~~~~~-------~v~~~~G~~~al~~~~~~~------   96 (335)
T 1uu1_A           35 EDLVDEVFRRLNSDALRIYYD-SPDEELIEK----ILSYLDTDFLSKN-------NVSVGNGADEIIYVMMLMF------   96 (335)
T ss_dssp             HHHHHHHHHTCCGGGGGSCCC-SSCHHHHHH----HHHHHTCSSCCGG-------GEEEESSHHHHHHHHHHHS------
T ss_pred             HHHHHHHHHHhhhhhhhcCCC-CchHHHHHH----HHHHcCCCCCCHH-------HEEEcCChHHHHHHHHHHh------
Confidence            344555555552 12223322 335566666    666666   5443       4689999999988777654      


Q ss_pred             HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc
Q 010842          180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST  259 (499)
Q Consensus       180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~  259 (499)
                              +..|+++ .+|..+...++..|.   +++.+|.++  +|.+|+++|     +      .+.+|+++.++|+|
T Consensus        97 --------gd~Vl~~-p~y~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l-----~------~~~~v~l~~p~npt  151 (335)
T 1uu1_A           97 --------DRSVFFP-PTYSCYRIFAKAVGA---KFLEVPLTK--DLRIPEVNV-----G------EGDVVFIPNPNNPT  151 (335)
T ss_dssp             --------SEEEECS-SSCHHHHHHHHHHTC---EEEECCCCT--TSCCCCCCC-----C------TTEEEEEESSCTTT
T ss_pred             --------CCcEEEC-CCcHHHHHHHHHcCC---eEEEeccCC--CCCCCHHHc-----C------CCCEEEEeCCCCCC
Confidence                    2358888 999999999999999   999999864  368888887     1      24477778999999


Q ss_pred             cccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhc
Q 010842          260 TAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALS  338 (499)
Q Consensus       260 G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~  338 (499)
                      |.+-|.++|.++++.+| ++++|++|+.+...  ...... +....+.++.+.+|+++.| ..+|+++.++ +.. +.+.
T Consensus       152 G~~~~~~~l~~l~~~~~-~li~De~~~~~~~~--~~~~~~-~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-~~~-~~l~  225 (335)
T 1uu1_A          152 GHVFEREEIERILKTGA-FVALDEAYYEFHGE--SYVDFL-KKYENLAVIRTFSKAFSLAAQRVGYVVASE-KFI-DAYN  225 (335)
T ss_dssp             CCCCCHHHHHHHHHTTC-EEEEECTTHHHHCC--CCGGGG-GTCSSEEEEEESTTTTTCGGGCCEEEEECH-HHH-HHHH
T ss_pred             CCCCCHHHHHHHHHhCC-EEEEECcchhhcch--hHHHHh-hhCCCEEEEecchhhcCCcccCeEEEEeCH-HHH-HHHH
Confidence            99999999999999989 99999999865321  111111 1123567889999999744 4579988843 322 2221


Q ss_pred             C-CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC
Q 010842          339 T-DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH  416 (499)
Q Consensus       339 ~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~  416 (499)
                      . ...|                       ....+..+++...+. .+.+++..++..++++++.+.|++. ++++. ++.
T Consensus       226 ~~~~~~-----------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~  280 (335)
T 1uu1_A          226 RVRLPF-----------------------NVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYRIT-DSR  280 (335)
T ss_dssp             HHSCTT-----------------------CSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBC-CCC
T ss_pred             HhcCCC-----------------------CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CcEEc-CCC
Confidence            1 1000                       112334444444432 2467788888899999999999887 67653 445


Q ss_pred             ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      .+.+.+.+..          ....++.+.|.++|+.+ .+    +..++|++++    +.+|+++++++|+++
T Consensus       281 ~~~~~~~~~~----------~~~~~~~~~l~~~gi~v-~~----~~~~iRis~~----~~~~i~~~~~~l~~~  334 (335)
T 1uu1_A          281 GNFVFVFMEK----------EEKERLLEHLRTKNVAV-RS----FREGVRITIG----KREENDMILRELEVF  334 (335)
T ss_dssp             SSEEEEECCT----------HHHHHHHHHHHHHTEEE-EE----ETTEEEEECC----CHHHHHHHHHHHHCC
T ss_pred             CeEEEEECCC----------CCHHHHHHHHHHCCEEE-EE----CCCeEEEEeC----CHHHHHHHHHHHHhh
Confidence            5566665532          11456777777778544 33    2347999985    367899999988753

>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A

Probab=99.80  E-value=2.5e-17  Score=168.69  Aligned_cols=300  Identities=9%  Similarity=0.030  Sum_probs=172.3

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CC-eEEEcCC-CCchhHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HK-LVVYGSD-QTHSTFAKV  204 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~-~~i~~s~-~~H~s~~ka  204 (499)
                      .....++.+.+++++|.+.         .++++|||+||..++.+++......   .|. ++ ..|++.+ ..|.+...+
T Consensus       106 ~~~~~~l~~~la~~~g~~~---------v~~~~sGseA~~~al~~a~~~~~~~---~g~~~gr~~vi~~~~~yhg~~~~~  173 (433)
T 1z7d_A          106 SVPLGICERYLTNLLGYDK---------VLMMNTGAEANETAYKLCRKWGYEV---KKIPENMAKIVVCKNNFSGRTLGC  173 (433)
T ss_dssp             EHHHHHHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHHHHHHHHHT---SCCCTTCCEEEEETTC--------
T ss_pred             CHHHHHHHHHHHhhcCCCe---------EEEeCCHHHHHHHHHHHHHHHhhhc---cCCCCCCCeEEEEeCCcCCcchhh
Confidence            3444555566888887432         4999999999999999887432110   011 12 4455554 445555555


Q ss_pred             HHHhCC-------CC--CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC----ChhHHHHH
Q 010842          205 CKLAGV-------SP--ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD----NVEPLAEV  271 (499)
Q Consensus       205 ~~~~G~-------g~--~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id----~l~~I~~i  271 (499)
                      +...|.       +.  ..++.+|.       .|+++|+++|+.     ..+.+|+++...+++|.+.    ++++|.++
T Consensus       174 ~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l  241 (433)
T 1z7d_A          174 ISASTTKKCTSNFGPFAPQFSKVPY-------DDLEALEEELKD-----PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDI  241 (433)
T ss_dssp             ------------------CEEEECT-------TCHHHHHHHHTS-----TTEEEEEECSSBSTTTSBCCCTTHHHHHHHH
T ss_pred             hcccCCccccccCCCCCCCeEEeCC-------CCHHHHHHHhCC-----CCEEEEEEECCCCCCCccCCCHHHHHHHHHH
Confidence            555441       10  14555553       289999999851     1244666665556688764    79999999


Q ss_pred             HHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCC
Q 010842          272 ANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSE  350 (499)
Q Consensus       272 a~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~  350 (499)
                      |++||++|++|++|.++......+.....++ ..|.+++  .|+++.. ...|+++.+++  +.+.+..   ....    
T Consensus       242 ~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t~--sK~l~~G~~~~G~v~~~~~--~~~~l~~---~~~~----  309 (433)
T 1z7d_A          242 CKKYNVLFVADEVQTGLGRTGKLLCVHHYNV-KPDVILL--GKALSGGHYPISAVLANDD--IMLVIKP---GEHG----  309 (433)
T ss_dssp             HHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEE--CGGGGTTSSCCEEEEECHH--HHTTCCT---TCCC----
T ss_pred             HHHcCCEEEEecCccCCCcCCcchhhHhcCC-CCCEEEE--CccccCCCCCeEEEEECHH--HHhhhcc---cccc----
Confidence            9999999999999976432111111111232 3687755  5999865 56899888753  2222211   0000    


Q ss_pred             CCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEEcCCCceEEEEE
Q 010842          351 SNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PRFEIVVPRHFALVCFR  423 (499)
Q Consensus       351 ~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~  423 (499)
                                   .+-....+...+   +++.+..   +++.++..++++++.+.|+++    |.+..+ ++..+++.+.
T Consensus       310 -------------~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~-~~~g~~~~i~  372 (433)
T 1z7d_A          310 -------------STYGGNPLAASICVEALNVLIN---EKLCENAEKLGGPFLENLKRELKDSKIVRDV-RGKGLLCAIE  372 (433)
T ss_dssp             -------------CTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE-EEETTEEEEE
T ss_pred             -------------ccCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EeeeeEEEEE
Confidence                         000112333333   3443322   245667777888888887653    433322 2344566776


Q ss_pred             ecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          424 LNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +....        ....++.+.|.++|..+ .+.   +..++|+++. ..+|++||++++++|+++.+++
T Consensus       373 ~~~~~--------~~~~~~~~~l~~~Gv~v-~~~---~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~  429 (433)
T 1z7d_A          373 FKNEL--------VNVLDICLKLKENGLIT-RDV---HDKTIRLTPP-LCITKEQLDECTEIIVKTVKFF  429 (433)
T ss_dssp             ECTTT--------CCHHHHHHHHHHTTEEC-CEE---TTTEEEECCC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EccCh--------hHHHHHHHHHHHCCeEE-ecC---CCCEEEEECC-cCCCHHHHHHHHHHHHHHHHHH
Confidence            65320        01356778888888543 332   3457999884 7789999999999999988775

>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}

Probab=99.79  E-value=2.7e-17  Score=168.27  Aligned_cols=330  Identities=13%  Similarity=0.042  Sum_probs=179.2

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCCchhHHHH-
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHSTFAKV-  204 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~H~s~~ka-  204 (499)
                      ......++.+|+++.++.+.+       ..++|+|||+|+..++.+++......    |. ++..|++.+.+++..... 
T Consensus        70 ~~~~~~~l~~~la~~~~~~~~-------~v~~~~gg~ea~~~al~~~~~~~~~~----g~~~~~~vi~~~~~yhg~~~~~  138 (430)
T 3i4j_A           70 SSDVLEEYAGRLARFVGLPTF-------RFWAVSGGSEATESAVKLARQYHVER----GEPGRFKVITRVPSYHGASLGS  138 (430)
T ss_dssp             EEHHHHHHHHHHHHHTTCTTC-------EEEEESSHHHHHHHHHHHHHHHHHHT----TCTTCCEEEEETTC--------
T ss_pred             CCHHHHHHHHHHHHhCCCCCC-------EEEEeCcHHHHHHHHHHHHHHHHHhc----CCCCCcEEEEEeCCcCCCCccc
Confidence            345667778889999987543       36999999999999999887543221    21 244555555554443332 


Q ss_pred             HHHhCCCC---------C--CeEEeeCCCC-CCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC-cccccCC----hhH
Q 010842          205 CKLAGVSP---------A--NIRALPTSVD-ANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT-STTAVDN----VEP  267 (499)
Q Consensus       205 ~~~~G~g~---------~--~v~~v~~~~~-~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt-~~G~id~----l~~  267 (499)
                      ....|...         .  .+..+|.+.. .....|+++|+++|++..  ...+.+|+++..++ ++|.+-+    +++
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~--~~~~~~vi~~p~~~~~~G~~~~~~~~l~~  216 (430)
T 3i4j_A          139 LAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLEREG--PETVAAFMAEPVVGASDAALAPAPGYYER  216 (430)
T ss_dssp             -----------------CGGGSCEECCCCTTSCHHHHHTHHHHHHHHHC--GGGEEEEEECSSCCGGGTTCCCCTTHHHH
T ss_pred             ccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHHhcC--CCCEEEEEEcCcccCcCCcccCCHHHHHH
Confidence            22222100         0  3344554321 002457899999997531  02345666666667 8888776    999


Q ss_pred             HHHHHHHhCCEEEeeccccchhccCccchhhhc-CCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCc-cCC
Q 010842          268 LAEVANEYGIWVHVDAAYAGSACICPEFRHYLN-GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDP-EYL  344 (499)
Q Consensus       268 I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~-g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~-~yl  344 (499)
                      |+++|++||+++|+|++|.++......+..... ++ ..|.++++  |.++.. ...|+++.+++ .. +.+.... .+.
T Consensus       217 l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~-~~di~t~s--K~l~~G~~r~G~~~~~~~-i~-~~~~~~~~~~~  291 (430)
T 3i4j_A          217 VRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGV-TPDIAVLG--KGLAAGYAPLAGLLAAPQ-VY-ETVMGGSGAFM  291 (430)
T ss_dssp             HHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTC-CCSEEEEC--GGGTTTSSCCEEEEECHH-HH-HHHHHTTCBCC
T ss_pred             HHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCC-CCcEEEEc--ccccCCccccEEEEECHH-HH-HHHhccCCccc
Confidence            999999999999999999875332111111111 32 25777765  998765 55788877443 22 3332211 111


Q ss_pred             CCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH----hcCCCeEEEcCCCceEE
Q 010842          345 KNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFV----KSDPRFEIVVPRHFALV  420 (499)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L----~~~~~~~~~~~~~~~~v  420 (499)
                      ..                 .+.....+...+++..+..-.-+++.++..++.+++++.|    .+.|.+..+ ++..+++
T Consensus       292 ~~-----------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~  353 (430)
T 3i4j_A          292 HG-----------------FTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQARFPQMMQV-RGTGLLL  353 (430)
T ss_dssp             CC-----------------CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETTEE
T ss_pred             cc-----------------CCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEEEE
Confidence            11                 0111234444444444321011233444444444444444    456766654 3444566


Q ss_pred             EEEecCCCCCCcchh-HHHHHHHHHHHHhcCCEEEEee-eE--CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          421 CFRLNPYPHSGSADT-EMLNRKLLDWVNSTGRVYLTHT-IV--GGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       421 ~f~~~~~~~~~~~~~-~~~~~~l~~~l~~~g~~~~~~~-~~--~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      .+.+.+.. ...... .....++.+.+.++|.++.... ..  .+..++|+++. ...|++++++++++|+++.+++.
T Consensus       354 ~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~~~  429 (430)
T 3i4j_A          354 GVVLGDLA-TGQAFETPGIASRIGAAALKRGLITYPGSGAEPNGRGDHLLLGPP-LSITAAEVDGLLALLAGALEDVL  429 (430)
T ss_dssp             EEEEC-------------CHHHHHHHHHHTTEECC-----------CEEEECCC-TTCCHHHHHHHHHHHHHHHHHHC
T ss_pred             EEEecccc-ccCCCccHHHHHHHHHHHHhCCCEEEecccccCCCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHhh
Confidence            66654211 000000 1113567888888886543321 11  13467999984 67899999999999999987653

>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}

Probab=99.79  E-value=6.4e-17  Score=164.95  Aligned_cols=299  Identities=10%  Similarity=-0.002  Sum_probs=184.1

Q ss_pred             HHHHHHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCC-CCchhHHHHHH
Q 010842          129 ELEIVVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSD-QTHSTFAKVCK  206 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~-~~H~s~~ka~~  206 (499)
                      ....++.+.+++++|.+ .+       ..++|+||++|+..++.+++..          .+..|++.. ..|.+...++.
T Consensus        86 ~~~~~l~~~la~~~~~~~~~-------~v~~~~gg~ea~~~ai~~~~~~----------~~~~vi~~~p~yh~~~~~~~~  148 (419)
T 2eo5_A           86 IPQLELAKKLVTYSPGNFQK-------KVFFSNSGTEAIEASIKVVKNT----------GRKYIIAFLGGFHGRTFGSIS  148 (419)
T ss_dssp             HHHHHHHHHHHHHSSCSSCE-------EEEEESSHHHHHHHHHHHHHTT----------SCCEEEEETTCCCCSSHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCcCC-------EEEEeCchHHHHHHHHHHHHHh----------hCCcEEEECCCcCCCCHhhHh
Confidence            34455667799999985 33       3599999999999999887642          133455544 45656655555


Q ss_pred             HhCC--------C--CCCeEEeeCCCCCCCc----------------cCHHHHH-HHHHHHHHcCCccEEEEEecCCCcc
Q 010842          207 LAGV--------S--PANIRALPTSVDANFS----------------LSPQLLR-RAVEADVEAGLVPLFLCATVGTTST  259 (499)
Q Consensus       207 ~~G~--------g--~~~v~~v~~~~~~~~~----------------~d~~~L~-~~i~~~~~~g~~p~~vv~t~gtt~~  259 (499)
                      ..|.        +  ...++.+|.+.  .|+                +|+++|+ +++++.. ....+.+|+++..++++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~-~~~~~~~vi~~p~~~~t  225 (419)
T 2eo5_A          149 LTASKAVQRSIVGPFMPGVIHVPYPN--PYRNPWHINGYENPSELVNRVIEFIEDYIFVNLV-PPEEVAGIFFEPIQGEG  225 (419)
T ss_dssp             HCCSCGGGGCSSCCCCTTEEEECCCC--SSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTC-CGGGEEEEEECSSBTTT
T ss_pred             hcCCccccccccCCCCCCCEEECCCc--cccccccccccccchhhHHHHHHHHHHHHHhhcc-CCCCEEEEEEeCccCCC
Confidence            4331        1  12577888753  233                4788999 8887420 00123455555545668


Q ss_pred             cccCC----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHH
Q 010842          260 TAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLV  334 (499)
Q Consensus       260 G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~  334 (499)
                      |.+-+    +++|+++|++||+++|+|++|.++............++ ..|.++++  |.++.+ ..+|+++.+++- . 
T Consensus       226 G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~-~~d~~t~s--K~~~~G~~riG~~~~~~~~-~-  300 (419)
T 2eo5_A          226 GYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNT-VPDVITLA--KALGGGIMPIGATIFRKDL-D-  300 (419)
T ss_dssp             TSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTTSCCEEEEEEGGG-C-
T ss_pred             CCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCC-CCCEEEec--ccccCCccceEEEEEchHh-h-
Confidence            98666    99999999999999999999986532211111111122 35777654  888866 788999887631 1 


Q ss_pred             HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842          335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP  414 (499)
Q Consensus       335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~  414 (499)
                       .+ .  ...                  ..+-....+...+++..+.  .+++..++..++++++.+.|+++  +..+ +
T Consensus       301 -~~-~--~~~------------------~~t~~~n~~~~~aa~aal~--~~~~~~~~~~~~~~~l~~~L~~~--~~~~-~  353 (419)
T 2eo5_A          301 -FK-P--GMH------------------SNTFGGNALACAIGSKVID--IVKDLLPHVNEIGKIFAEELQGL--ADDV-R  353 (419)
T ss_dssp             -CC---------------------------CCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTS--SSEE-E
T ss_pred             -cC-C--ccc------------------CCCCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHh--hhhe-E
Confidence             11 0  000                  0011112344444444431  22337778888999999999876  2222 3


Q ss_pred             CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          415 RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       415 ~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +..+++.+.+.+.        ..... +.+.|.++|..+...    +..++|+++ +..+|++++++++++|+++.+++
T Consensus       354 ~~g~~~~i~~~~~--------~~~~~-~~~~l~~~Gv~v~~~----~~~~lRis~-~~~~t~e~i~~~l~~l~~~l~~~  418 (419)
T 2eo5_A          354 GIGLAWGLEYNEK--------KVRDR-IIGESFKRGLLLLPA----GRSAIRVIP-PLVISEEEAKQGLDILKKVIKVV  418 (419)
T ss_dssp             EETTEEEEECSCH--------HHHHH-HHHHHHHTTEECEEE----TTTEEEECC-CTTCCHHHHHHHHHHHHHHHHHC
T ss_pred             eeeEEEEEEEecC--------ccHHH-HHHHHHHCCCEEecC----CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHhc
Confidence            3445666666331        12245 778888888544332    235799988 47789999999999999987653

>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*

Probab=99.78  E-value=1.3e-17  Score=169.21  Aligned_cols=252  Identities=10%  Similarity=0.060  Sum_probs=171.3

Q ss_pred             hhHHHHHHHHHHHHHHcCCCCccccCCCccEEE---cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCC-CCchhH
Q 010842          126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVI---QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSD-QTHSTF  201 (499)
Q Consensus       126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~---t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~-~~H~s~  201 (499)
                      +..++|+.    +++++|.+..         ++   ++|||+||..++.+..+           ++..|+++. ..|...
T Consensus        74 ~~~~Le~~----lA~l~g~e~a---------lv~p~~~sGt~Ai~~al~all~-----------pGD~Vl~~~~~~y~~~  129 (427)
T 3i16_A           74 GRDSLDAV----YARVFNTESA---------LVRPHFVNGTHALGAALFGNLR-----------PGNTMLSVCGEPYDTL  129 (427)
T ss_dssp             HHHHHHHH----HHHHHTCSEE---------EEETTCCSHHHHHHHHHHHHCC-----------TTCEEEESSSSCCGGG
T ss_pred             HHHHHHHH----HHHHhCCcce---------EEeCCCccHHHHHHHHHHHHhC-----------CCCEEEEeCCCccHHH
Confidence            34556654    9999998764         66   89999999888776532           567788887 777766


Q ss_pred             H-----------HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEec----CCCcccccCChh
Q 010842          202 A-----------KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATV----GTTSTTAVDNVE  266 (499)
Q Consensus       202 ~-----------ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~----gtt~~G~id~l~  266 (499)
                      .           +.++..|+   +++.+|.++++  .+|+++|++++++.    ..+.+|+++.    ++|++|.+.|++
T Consensus       130 ~~~~g~~~~~~~~~l~~~G~---~~~~v~~~~~g--~~D~e~l~~~l~~~----~~tklV~i~~s~~~p~nptg~i~dl~  200 (427)
T 3i16_A          130 HDVIGITENSNMGSLKEFGI---NYKQVDLKEDG--KPNLEEIEKVLKED----ESITLVHIQRSTGYGWRRALLIEDIK  200 (427)
T ss_dssp             HHHHTCSCCCSSCCTGGGTC---EEEECCCCTTS--SCCHHHHHHHHHTC----TTEEEEEEECSCCSSSSCCCCHHHHH
T ss_pred             HHHHhccccchHHHHHHcCC---EEEEecCccCC--CcCHHHHHHHhhCC----CCCEEEEEEcCCCCCCCCcccHHHHH
Confidence            5           33455688   89999987654  89999999999720    1234788887    899999999999


Q ss_pred             HHHHHHHH--hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC--cceEEEEeCchhHHHhhcC--C
Q 010842          267 PLAEVANE--YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL--DCCCLWVKQPGLLVKALST--D  340 (499)
Q Consensus       267 ~I~~ia~~--~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~--~~g~l~~r~~~~l~~~~~~--~  340 (499)
                      +|+++|++  +|+++|||++|+.+.....   ....   .+|.++.+.||+++.+.  .+|+++.++ +.. +.+..  .
T Consensus       201 ~i~~la~~~~~g~~livD~a~~~~~~~~~---p~~~---gaDiv~~S~sK~lgg~g~~~gG~i~~~~-~li-~~l~~~~~  272 (427)
T 3i16_A          201 SIVDCVKNIRKDIICFVDNCYGEFMDTKE---PTDV---GADLIAGSLIKNIGGGIAPTGGYLAGTK-DCI-EKTSYRLT  272 (427)
T ss_dssp             HHHHHHHHHCTTSEEEEECTTTTTSSSSC---GGGG---TCSEEEEETTSGGGTTTCCSCEEEEECH-HHH-HHHHHHHS
T ss_pred             HHHHHHHHhCCCCEEEEECCCccccccCC---cccc---CCeEEEecCcccCCCCCCceEEEEEECH-HHH-HHHHHhcc
Confidence            99999999  9999999999987642211   1111   48999999999998742  347776653 332 22211  1


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce--
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA--  418 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~--  418 (499)
                      ...+.                ...+..+.  ..|..++.+  ..+..++++..+++.++++.|+++ ++++... ...  
T Consensus       273 ~~~~g----------------~~~~~~~~--~a~~~l~gl--~~~~~r~~~~~~~a~~la~~L~~~-g~~V~p~-~~~~~  330 (427)
T 3i16_A          273 VPGIG----------------GECGSTFG--VVRSMYQGL--FLAPHISMEALKGAILCSRIMELA-GFEVMPK-YDEKR  330 (427)
T ss_dssp             CTTTG----------------GGCCCCTT--CHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHT-TCEEESC-TTSCC
T ss_pred             cCccC----------------ccCCccHH--HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhC-CCeecCC-CCCCC
Confidence            11111                11111111  135554433  556788899999999999999998 5677532 333  


Q ss_pred             ---EEEEEecCCCCCCcchhHHHHHHHHHHHHhc
Q 010842          419 ---LVCFRLNPYPHSGSADTEMLNRKLLDWVNST  449 (499)
Q Consensus       419 ---~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~  449 (499)
                         ++.|.+..         .+...++++.|...
T Consensus       331 ~~~i~~i~l~~---------~~~~~~f~~~l~~~  355 (427)
T 3i16_A          331 SDIIQSIKFND---------KDKLIEFCKGIQTG  355 (427)
T ss_dssp             SSSCEEEECSS---------HHHHHHHHHHHHHT
T ss_pred             ccEEEEEEECC---------HHHHHHHHHHHhhc
Confidence               67777753         33456677776654

>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*

Probab=99.78  E-value=6.3e-17  Score=166.00  Aligned_cols=297  Identities=11%  Similarity=0.037  Sum_probs=179.2

Q ss_pred             HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc--C-CeEEEcCCCCchhHHHHHHH
Q 010842          131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM--H-KLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~--~-~~~i~~s~~~H~s~~ka~~~  207 (499)
                      ..++.+++++++|.+.         .++++|||+|+..++.+++......   .|.  . +.+|+.....|.+...++..
T Consensus       120 ~~~l~~~la~~~g~~~---------v~~~~sGseA~~~al~~~~~~~~~~---~g~~~g~~~vi~~~~~yhg~~~~~~~~  187 (439)
T 2oat_A          120 LGEYEEYITKLFNYHK---------VLPMNTGVEAGETACKLARKWGYTV---KGIQKYKAKIVFAAGNFWGRTLSAISS  187 (439)
T ss_dssp             HHHHHHHHHHHHTCSE---------EEEESSHHHHHHHHHHHHHHHHHHT---TCCCTTCCEEEEETTCCCCSSHHHHTT
T ss_pred             HHHHHHHHHHhcCCCE---------EEEeCCHHHHHHHHHHHHHHHhhhc---cCCCCCCCeEEEEcCCCCCCCHhHhhc
Confidence            3444455777777432         4899999999999999887532110   011  1 23444444556666666655


Q ss_pred             hC-------CCC--CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC----ChhHHHHHHHH
Q 010842          208 AG-------VSP--ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD----NVEPLAEVANE  274 (499)
Q Consensus       208 ~G-------~g~--~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id----~l~~I~~ia~~  274 (499)
                      .|       .+.  ..++.+|.       .|+++|+++|+.     ..+.+|++...++++|.+.    ++++|.++|++
T Consensus       188 ~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~~-----~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~  255 (439)
T 2oat_A          188 STDPTSYDGFGPFMPGFDIIPY-------NDLPALERALQD-----PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTR  255 (439)
T ss_dssp             CCCHHHHTTSCSCCTTEEEECS-------SCHHHHHHHTTS-----TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHH
T ss_pred             CCChhcccCCCCCCCCeEEeCC-------CCHHHHHHHhCC-----CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHH
Confidence            44       111  15666664       289999998851     1244666665556688765    79999999999


Q ss_pred             hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842          275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS  353 (499)
Q Consensus       275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~  353 (499)
                      ||+++++|++|.++......+.....++ ..|.+++  .|+++.. ...|+++.+++  +.+.+..   ....       
T Consensus       256 ~gillI~DEv~~g~g~~g~~~~~~~~~~-~~Di~t~--sK~l~~G~~~~G~v~~~~~--~~~~l~~---~~~~-------  320 (439)
T 2oat_A          256 HQVLFIADEIQTGLARTGRWLAVDYENV-RPDIVLL--GKALSGGLYPVSAVLCDDD--IMLTIKP---GEHG-------  320 (439)
T ss_dssp             TTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEE--CGGGGTTSSCCEEEEECHH--HHTTSCT---TSSC-------
T ss_pred             cCCEEEEeccccCCccCCcchhHHHhCC-CCcEEEe--cccccCCCCCeEEEEECHH--HHhccCC---CCcc-------
Confidence            9999999999976432111111111233 3687754  6999865 56899988753  2222211   0000       


Q ss_pred             cccCCCcccCCCCCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE--cCCCceEEEEEecCCC
Q 010842          354 VVDFKDWQVGTGRRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV--VPRHFALVCFRLNPYP  428 (499)
Q Consensus       354 ~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~--~~~~~~~v~f~~~~~~  428 (499)
                                .+-....+...   .+++.+..   ++..++..++++++.+.|+++ ++.++  .++...++.+.+....
T Consensus       321 ----------~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l-~~~~~~~~~~~g~~~~v~l~~~~  386 (439)
T 2oat_A          321 ----------STYGGNPLGCRVAIAALEVLEE---ENLAENADKLGIILRNELMKL-PSDVVTAVRGKGLLNAIVIKETK  386 (439)
T ss_dssp             ----------CSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHTTS-CTTTEEEEEEETTEEEEEECCCS
T ss_pred             ----------cCCCcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHh-cCCCcEEEEeeeeEEEEEEecCc
Confidence                      00011233333   34444322   256778888999999999876 33211  1233456666664320


Q ss_pred             CCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          429 HSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       429 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                         .    ....++.++|.++|..+ .+   .+..++|+++. ..+|++||++++++|+++.++
T Consensus       387 ---~----~~~~~l~~~l~~~Gv~v-~~---~~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l~~  438 (439)
T 2oat_A          387 ---D----WDAWKVCLRLRDNGLLA-KP---THGDIIRFAPP-LVIKEDELRESIEIINKTILS  438 (439)
T ss_dssp             ---S----CCHHHHHHHHHHTTEEC-CB---SSSSEEEECCC-TTCCHHHHHHHHHHHHHHHHT
T ss_pred             ---c----HHHHHHHHHHHHCCeEE-ec---CCCCEEEEECc-cCCCHHHHHHHHHHHHHHHHh
Confidence               0    01346777888888543 33   23467999884 778999999999999988653

>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*

Probab=99.78  E-value=8.7e-18  Score=169.93  Aligned_cols=249  Identities=12%  Similarity=0.039  Sum_probs=169.7

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEE---cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCC-CCchhHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVI---QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSD-QTHSTFA  202 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~---t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~-~~H~s~~  202 (499)
                      ..++|+.    +++++|.+..         ++   ++|||+||..++.+..+           ++..|+++. ..|....
T Consensus        61 ~~~Le~~----lA~l~g~e~a---------lv~p~~~sGt~Ai~~al~all~-----------~GD~Vl~~~~~~y~~~~  116 (409)
T 3jzl_A           61 RDTLERV----YATVFKTEAA---------LVRPQIISGTHAISTVLFGILR-----------PDDELLYITGQPYDTLE  116 (409)
T ss_dssp             HHHHHHH----HHHHHTCSEE---------EEETTSCSHHHHHHHHHHHHCC-----------TTCEEEECSSSCCTTHH
T ss_pred             HHHHHHH----HHHHhCCCcE---------EEECCCccHHHHHHHHHHHhcC-----------CCCEEEEeCCCCcHhHH
Confidence            4556654    8999998764         55   89999999888776532           566788887 7787777


Q ss_pred             HH----------HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEec----CCCcccccCChhHH
Q 010842          203 KV----------CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATV----GTTSTTAVDNVEPL  268 (499)
Q Consensus       203 ka----------~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~----gtt~~G~id~l~~I  268 (499)
                      ..          ++..|+   +++.+|.+++  +.+|+++|+++++++      +.+|++..    ++|++|.+.|+++|
T Consensus       117 ~~~~~~g~~~~~l~~~G~---~~~~v~~~~~--g~~d~e~l~~ai~~~------tklV~i~~s~g~p~nptg~v~~l~~I  185 (409)
T 3jzl_A          117 EIVGIRKQGQGSLKDFHI---GYSSVPLLEN--GDVDFPRIAKKMTPK------TKMIGIQRSRGYADRPSFTIEKIKEM  185 (409)
T ss_dssp             HHHTSSSSSSSCTGGGTC---EEEECCCCTT--SCCCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHH
T ss_pred             HHHhcccchhhHHHHcCC---EEEEeCCCCC--CCcCHHHHHHhccCC------CeEEEEECCCCCCCCCcCccccHHHH
Confidence            53          355678   8999998764  589999999998654      34788888    99999999999999


Q ss_pred             HHHHHH--hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC--cceEEEEeCchhHHHhhcC--Ccc
Q 010842          269 AEVANE--YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL--DCCCLWVKQPGLLVKALST--DPE  342 (499)
Q Consensus       269 ~~ia~~--~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~--~~g~l~~r~~~~l~~~~~~--~~~  342 (499)
                      +++|++  +|+++|||++|+.+.....   ....   ++|.++.+.||+++.+.  ..|+++.+ ++.. +.+..  ...
T Consensus       186 ~~la~~~~~~~~livD~a~~~~~~~~~---p~~~---g~Div~~S~sK~lgg~~~~~GG~v~~~-~~li-~~l~~~~~~~  257 (409)
T 3jzl_A          186 IVFVKNINPEVIVFVDNCYGEFVEYQE---PPEV---GADIIAGSLIKNPGGGLAKTGGYIAGK-EALV-DLCGYRLTTP  257 (409)
T ss_dssp             HHHHHHHCTTCEEEEECTTCTTTSSCC---SGGG---TCSEEEEETTSGGGTTTCSSCEEEEEC-HHHH-HHHHHHHSCT
T ss_pred             HHHHHhhCCCCEEEEeCCcccccccCC---cccc---CCeEEEECccccCCccCCceEEEEEeC-HHHH-HHHHHHhccc
Confidence            999999  9999999999987642211   1111   38999999999998753  24666664 4333 22211  112


Q ss_pred             CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce----
Q 010842          343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA----  418 (499)
Q Consensus       343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~----  418 (499)
                      ++...                .+.....  .|+.++.  ......++++..++++++++.|+++ ++++... ...    
T Consensus       258 ~~g~~----------------~g~~~~~--~~~~l~g--l~~~~~r~~~~~~~a~~la~~L~~~-g~~v~p~-~~~~~~~  315 (409)
T 3jzl_A          258 GIGRE----------------AGASLYS--LLEMYQG--FFLAPHVTAQAIKGARFTAAMLAEF-GVEADPV-WDAPRTD  315 (409)
T ss_dssp             TTGGG----------------CCCCTTC--HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHT-TCEEESC-TTSCCSS
T ss_pred             ccccc----------------ccccHHH--HHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHhC-CCcccCC-CCCCCcc
Confidence            22110                1111111  2333333  3556778889999999999999998 5677532 223    


Q ss_pred             -EEEEEecCCCCCCcchhHHHHHHHHHHHHhc
Q 010842          419 -LVCFRLNPYPHSGSADTEMLNRKLLDWVNST  449 (499)
Q Consensus       419 -~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~  449 (499)
                       +++|.+..         .+...++++.|...
T Consensus       316 ~i~~i~l~~---------~~~~~~~~~~L~~~  338 (409)
T 3jzl_A          316 LIQSVSFHN---------KEKMVAFAQAIQAA  338 (409)
T ss_dssp             SCCEEECSC---------HHHHHHHHHHHHHT
T ss_pred             EEEEEEeCC---------HHHHHHHHHHHHhc
Confidence             66776642         33455666666654

>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*

Probab=99.78  E-value=2e-18  Score=173.40  Aligned_cols=298  Identities=14%  Similarity=0.052  Sum_probs=180.5

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC---CchhHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ---THSTFAKV  204 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~---~H~s~~ka  204 (499)
                      ..+|+++.+++++++|.++.      ...++|+|||+|+..++.+.             ++..|+++..   .|+++.+.
T Consensus        57 ~~~~~~~~~~~a~~~g~~~~------~~~~~~~ggt~a~~~~~~~~-------------~gd~Vl~~~~~y~~~~~~~~~  117 (374)
T 2aeu_A           57 SYFAEKVNEYGLKHLGGDEN------DKCVGFNRTSSAILATILAL-------------KPKKVIHYLPELPGHPSIERS  117 (374)
T ss_dssp             HHHHHHHHHHHHHHHTCCTT------EEEEEESSHHHHHHHHHHHH-------------CCSEEEEECSSSSCCTHHHHH
T ss_pred             hHHHHHHHHHHHHHhCCCCc------ceEEEEcChHHHHHHHHHhC-------------CCCEEEEecCCCCccHHHHHH
Confidence            45677888888999998411      03589999999999888765             2345777777   46666667


Q ss_pred             HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEE-EEEecCCCccc-ccCChhHHHHHHHHhCCEEEee
Q 010842          205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLF-LCATVGTTSTT-AVDNVEPLAEVANEYGIWVHVD  282 (499)
Q Consensus       205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~-vv~t~gtt~~G-~id~l~~I~~ia~~~~~~lhvD  282 (499)
                      ++..|+   +++.+         +|+++|+++ ++      .+.+ |+.+.++|++| ...|+++|+++|++||+++|+|
T Consensus       118 ~~~~g~---~~~~v---------~d~~~l~~~-~~------~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~D  178 (374)
T 2aeu_A          118 CKIVNA---KYFES---------DKVGEILNK-ID------KDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVD  178 (374)
T ss_dssp             HHHTTC---EEEEE---------SCHHHHHTT-CC------TTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred             HHHcCc---EEEEe---------CCHHHHHhc-CC------CccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEE
Confidence            888898   88777         278888776 32      2456 77888999999 8999999999999999999999


Q ss_pred             ccccchhccCccchh-hhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcc
Q 010842          283 AAYAGSACICPEFRH-YLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQ  361 (499)
Q Consensus       283 ~A~g~~~~~~~~~~~-~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~  361 (499)
                      ++|+.+.. .+.... ... . ..|.++.++||++++| .+|+++.+++ .. +.+.....+.                 
T Consensus       179 e~~~~~~~-~~~~~~~~~~-~-~~di~~~S~sK~l~g~-~~G~~~~~~~-~~-~~l~~~~~~~-----------------  235 (374)
T 2aeu_A          179 DASGARVR-LLFNQPPALK-L-GADLVVTSTDKLMEGP-RGGLLAGKKE-LV-DKIYIEGTKF-----------------  235 (374)
T ss_dssp             CTTHHHHH-HHTTCCCHHH-H-TCSEEEEETTSSSSSC-SCEEEEEEHH-HH-HHHHHHHHTT-----------------
T ss_pred             CCcccccc-cccccCCccc-c-CCcEEEecCcccccCc-ceEEEEECHH-HH-HHHHHhhccc-----------------
Confidence            99977631 011010 111 1 3799999999998765 7888877653 22 2221110000                 


Q ss_pred             cCCCCCCCcHHHHHH---HHHhcHHHHHHHHHHHHHH----HHHHHHHHhcC---CCeEEEcCCCceEEEEEecCCCCCC
Q 010842          362 VGTGRRFKSLRLWMV---LRSYGVLNLQSHIRSDIRL----AKMFEGFVKSD---PRFEIVVPRHFALVCFRLNPYPHSG  431 (499)
Q Consensus       362 ~~~sr~~~al~~~~~---l~~~g~~g~~~~~~~~~~~----a~~l~~~L~~~---~~~~~~~~~~~~~v~f~~~~~~~~~  431 (499)
                         +.....+.++++   +..+..+.+++..++...+    .+.+.+.|..+   +++.+...+.. .+.+......   
T Consensus       236 ---~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g-~~~~~~~~~~---  308 (374)
T 2aeu_A          236 ---GLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTG-FVIKRVYKDD---  308 (374)
T ss_dssp             ---TCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSE-EEEEEEESSH---
T ss_pred             ---cCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCce-EEEEeecccc---
Confidence               001122333333   3333222334444444444    35556656554   45665444443 3333322110   


Q ss_pred             cchhH-HHHHHHHHHH-HhcCCEEEEeeeE-CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          432 SADTE-MLNRKLLDWV-NSTGRVYLTHTIV-GGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       432 ~~~~~-~~~~~l~~~l-~~~g~~~~~~~~~-~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                        ..+ ....++..++ .+.|+.+..+..+ .+..++|++++....++.+++++.++|+++.+++.+
T Consensus       309 --~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~~  373 (374)
T 2aeu_A          309 --TINIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFK  373 (374)
T ss_dssp             --HHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTC
T ss_pred             --cccccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence              001 0112244333 3567544333222 234579999975555666699999999998887754

>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}

Probab=99.78  E-value=1.2e-16  Score=164.64  Aligned_cols=346  Identities=12%  Similarity=0.065  Sum_probs=190.5

Q ss_pred             HHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc
Q 010842          106 LGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN  185 (499)
Q Consensus       106 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g  185 (499)
                      +.+.+...+.....  ...........++.++++++++.+.+        .++|+|||+|+..|+.+++......    |
T Consensus        70 v~~A~~~~~~~~~~--~~~~~~~~~~~~la~~l~~~~~~~~~--------v~~~~ggseA~~~al~~~~~~~~~~----g  135 (452)
T 3n5m_A           70 LAEAAYKQLQTLSY--FPMSQSHEPAIKLAEKLNEWLGGEYV--------IFFSNSGSEANETAFKIARQYYAQK----G  135 (452)
T ss_dssp             HHHHHHHHHTTCCC--CCTTSEEHHHHHHHHHHHHHHTSCEE--------EEEESSHHHHHHHHHHHHHHHHHTT----T
T ss_pred             HHHHHHHHHHhcCC--cccccCCHHHHHHHHHHHHhCCCCce--------EEEeCchHHHHHHHHHHHHHHHHhc----C
Confidence            44444554543222  11223456777788889999876543        4999999999999999988532111    1


Q ss_pred             c-CCeEEEcCC-CCchhHHHHHHHhCCC---------CCCeEEeeCCCCCCCc----------cCHHHHHHHHHHHHHcC
Q 010842          186 M-HKLVVYGSD-QTHSTFAKVCKLAGVS---------PANIRALPTSVDANFS----------LSPQLLRRAVEADVEAG  244 (499)
Q Consensus       186 ~-~~~~i~~s~-~~H~s~~ka~~~~G~g---------~~~v~~v~~~~~~~~~----------~d~~~L~~~i~~~~~~g  244 (499)
                      . ++..|++.+ ..|.....+....|..         ...+..+|....-.+.          .++++|+++|++.  ..
T Consensus       136 ~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~  213 (452)
T 3n5m_A          136 EPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEVDRVMTWE--LS  213 (452)
T ss_dssp             CTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHHHHHHHHH--CG
T ss_pred             CCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHHHHHHHhc--CC
Confidence            1 233444444 4454443333333321         0134455542110011          1189999999731  11


Q ss_pred             CccEEEEEecC-CCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC
Q 010842          245 LVPLFLCATVG-TTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY  319 (499)
Q Consensus       245 ~~p~~vv~t~g-tt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p  319 (499)
                      ..+.+|++... ++ +|.+-|    +++|+++|++||++|++|++|.++......+.....++ ..|.++++  |.++..
T Consensus       214 ~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~-~~di~t~s--K~l~~G  289 (452)
T 3n5m_A          214 ETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDV-KPDIITMA--KGITSA  289 (452)
T ss_dssp             GGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTC-CCSEEEEC--GGGGTT
T ss_pred             CCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCC-CCCEEeec--ccccCC
Confidence            23456666666 68 998876    99999999999999999999987532221111112233 26777765  888766


Q ss_pred             -CcceEEEEeCchhHHHhhcC---CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHH
Q 010842          320 -LDCCCLWVKQPGLLVKALST---DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRL  395 (499)
Q Consensus       320 -~~~g~l~~r~~~~l~~~~~~---~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~  395 (499)
                       ...|+++.+++  +.+.+..   ...++..                 .+.....+...+++..+..-.-+++.++..++
T Consensus       290 ~~~ig~~~~~~~--i~~~~~~~~~~~~~~~~-----------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~  350 (452)
T 3n5m_A          290 YLPLSATAVKRE--IYEAFKGKGEYEFFRHI-----------------NTFGGNPAACALALKNLEIIENENLIERSAQM  350 (452)
T ss_dssp             SSCCEEEEEEHH--HHGGGCSSSTTCSCCCC-----------------CSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred             CcceEEEEECHH--HHHHHhhccCCCCcccc-----------------CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence             67888887653  3333322   1111110                 11122344444444443211112344555555


Q ss_pred             HHHHHHHHh----cCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee--ECCEEEEEEec
Q 010842          396 AKMFEGFVK----SDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI--VGGLYMLRFAV  469 (499)
Q Consensus       396 a~~l~~~L~----~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~~g~~~lRi~~  469 (499)
                      .+++++.|+    +.|.+..+. +...++.+.+................++.+.+.++|.++.....  ..+..++|+++
T Consensus       351 ~~~l~~~L~~~~~~~~~~~~~~-~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~~~~~iRi~~  429 (452)
T 3n5m_A          351 GSLLLEQLKEEIGEHPLVGDIR-GKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTTAGYNNILTLAP  429 (452)
T ss_dssp             HHHHHHHHHHHHTTCTTEEEEE-ESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSSTTCCCEEEECC
T ss_pred             HHHHHHHHHHHHhcCCCeEEEE-EEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCcccCCCCCEEEEEC
Confidence            555555554    456554442 33334444442211000000022345678888888965443221  11246899987


Q ss_pred             cCCCCcHHHHHHHHHHHHHHHHH
Q 010842          470 GASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       470 ~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      . ...|+++|++++++|+++.++
T Consensus       430 ~-~~~t~e~i~~~l~~l~~~l~~  451 (452)
T 3n5m_A          430 P-LVISSEEIAFVIGTLKTAMER  451 (452)
T ss_dssp             C-TTCCHHHHHHHHHHHHHHHTT
T ss_pred             C-CCCCHHHHHHHHHHHHHHHHh
Confidence            4 678999999999999987653

>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*

Probab=99.77  E-value=8.2e-17  Score=164.82  Aligned_cols=318  Identities=13%  Similarity=0.042  Sum_probs=183.7

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCC-CCchhHHHHHHH
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSD-QTHSTFAKVCKL  207 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~-~~H~s~~ka~~~  207 (499)
                      ....++.+.+++++|.+.+       ..++|+||++|+..++.+++...         ++..|++.. ..|.+...+...
T Consensus        85 ~~~~~l~~~la~~~~~~~~-------~v~~~~gg~ea~~~a~~~~~~~~---------~~~~vi~~~~~yhg~~~~~~~~  148 (433)
T 1zod_A           85 RPVVDLATRLANITPPGLD-------RALLLSTGAESNEAAIRMAKLVT---------GKYEIVGFAQSWHGMTGAAASA  148 (433)
T ss_dssp             HHHHHHHHHHHHHSCTTCC-------EEEEESCHHHHHHHHHHHHHHHH---------TCCEEEEETTCCCCSSHHHHHT
T ss_pred             HHHHHHHHHHHHhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhh---------CCCeEEEECCCcCCCChhHHhh
Confidence            4455666778999886543       36999999999999998876421         233344444 456555544443


Q ss_pred             hCC------C--CCCeEEeeCCCC--CCC--------ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----h
Q 010842          208 AGV------S--PANIRALPTSVD--ANF--------SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----V  265 (499)
Q Consensus       208 ~G~------g--~~~v~~v~~~~~--~~~--------~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l  265 (499)
                      .+.      +  ...++.++++..  ..|        .+|+++|++++++.  ....+.+|+++..++++|.+-+    +
T Consensus       149 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l  226 (433)
T 1zod_A          149 TYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQ--SSGNLAAFIAEPILSSGGIIELPDGYM  226 (433)
T ss_dssp             CCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHH--CCSCEEEEEECSEETTTTCEECCTTHH
T ss_pred             cCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHHHHhc--CCCCeEEEEEccccCCCCcccCCHHHH
Confidence            221      0  114566655321  011        25799999998753  1123445655544567897655    9


Q ss_pred             hHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCC
Q 010842          266 EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLK  345 (499)
Q Consensus       266 ~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~  345 (499)
                      ++|+++|++||+++++|++|+++............++ ..|.++++  |+++.+...|+++.+++  +.+.+... .+..
T Consensus       227 ~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~-~~di~s~s--K~~~~G~~ig~~~~~~~--~~~~~~~~-~~~~  300 (433)
T 1zod_A          227 AALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGV-TPDILTLS--KTLGAGLPLAAIVTSAA--IEERAHEL-GYLF  300 (433)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--HHHHTTSSCEEEEECHH--HHHHHHHT-TCCC
T ss_pred             HHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCC-CCCEEEec--ccccCCCCeeEEEEhHH--HHHhhccC-CCCC
Confidence            9999999999999999999986532211111111232 25766654  99887777899988753  22333211 1110


Q ss_pred             CCCCCCCCcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCce
Q 010842          346 NKPSESNSVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFA  418 (499)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~  418 (499)
                      .                 .+-....+...+   +++.+..+   +..++..++++++.+.|++    .|.+..+ ++..+
T Consensus       301 ~-----------------~t~~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~  359 (433)
T 1zod_A          301 Y-----------------TTHVSDPLPAAVGLRVLDVVQRD---GLVARANVMGDRLRRGLLDLMERFDCIGDV-RGRGL  359 (433)
T ss_dssp             C-----------------CTTTTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTEEEE-EEETT
T ss_pred             C-----------------CCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-EEEEE
Confidence            0                 000112333333   33333222   3456666777777777765    3544433 33445


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ++.+.+..... ..........++.+.+.++|..+.....+.+..++|+++ +..+|+++|++++++|+++.+++
T Consensus       360 ~~~i~~~~~~~-~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~~~lRi~~-~~~~t~~~i~~~l~~l~~~l~~~  432 (433)
T 1zod_A          360 LLGVEIVKDRR-TKEPADGLGAKITRECMNLGLSMNIVQLPGMGGVFRIAP-PLTVSEDEIDLGLSLLGQAIERA  432 (433)
T ss_dssp             EEEEEEEEETT-TTEECTTHHHHHHHHHHHTTEECCEECCTTSCCEEEECC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEecCcc-ccCCChHHHHHHHHHHHHCCCeEeccCCCCCCCEEEEEC-CcCCCHHHHHHHHHHHHHHHHHh
Confidence            56665542100 000001124567788888885443333223246799987 47789999999999999987765

>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*

Probab=99.77  E-value=4.6e-16  Score=159.99  Aligned_cols=327  Identities=9%  Similarity=0.044  Sum_probs=180.7

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCC-chhHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQT-HSTFAKV  204 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~-H~s~~ka  204 (499)
                      ......++.++++++++...+       ..++|+|||+|+..|+.+++......    |. .+..|++.+.+ |.+...+
T Consensus        85 ~~~~~~~la~~l~~~~~~~~~-------~v~~~~sGseA~~~al~~~~~~~~~~----G~~~~~~vi~~~~~yhg~~~~~  153 (448)
T 3dod_A           85 TNVPATQLAETLIDISPKKLT-------RVFYSDSGAEAMEIALKMAFQYWKNI----GKPEKQKFIAMKNGYHGDTIGA  153 (448)
T ss_dssp             EEHHHHHHHHHHHHHSCTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT----TCTTCCEEEEEC----------
T ss_pred             CCHHHHHHHHHHHHhCCCCCC-------EEEEeCchHHHHHHHHHHHHHHHHhh----CCCCCCEEEEECCCCCCccHHH
Confidence            445667778889999865433       35999999999999999998642211    11 13456555555 4433333


Q ss_pred             HHHhCCC---------CCCeEEeeCCCCCCCcc-----------CHHHHHHHHHHHHHcCCccEEEEEecCC-CcccccC
Q 010842          205 CKLAGVS---------PANIRALPTSVDANFSL-----------SPQLLRRAVEADVEAGLVPLFLCATVGT-TSTTAVD  263 (499)
Q Consensus       205 ~~~~G~g---------~~~v~~v~~~~~~~~~~-----------d~~~L~~~i~~~~~~g~~p~~vv~t~gt-t~~G~id  263 (499)
                      ....|..         ...+..+|.+.  .|+.           |+++|+++|+...   ..+.+|++.-.. ++.|.+-
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~a~vi~ep~~~~~~G~~~  228 (448)
T 3dod_A          154 VSVGSIELFHHVYGPLMFESYKAPIPY--VYRSESGDPDECRDQCLRELAQLLEEHH---EEIAALSIESMVQGASGMIV  228 (448)
T ss_dssp             -------------------CEEECCCC--CTTSSSCCHHHHHHHHHHHHHHHHHHHG---GGEEEEEEESSEESTTTCEE
T ss_pred             HHhcCCccccccccCCCCCceEeCCCc--cccCCccchhhhhHHHHHHHHHHHHhCC---CCEEEEEEeCcccCCCCeec
Confidence            3322210         01345565542  2343           4899999997321   224456665555 7778775


Q ss_pred             C----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhc
Q 010842          264 N----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALS  338 (499)
Q Consensus       264 ~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~  338 (499)
                      +    +++|+++|++||++|++|++|.++......+.....++ ..|.++++  |.++..+ ..|+++.+++  +.+.+.
T Consensus       229 ~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~-~~di~t~s--K~l~~G~~~ig~v~~~~~--~~~~~~  303 (448)
T 3dod_A          229 MPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENV-QPDLMAAG--KGITGGYLPIAVTFATED--IYKAFY  303 (448)
T ss_dssp             CCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTTSSCCEEEEEEHH--HHHTTC
T ss_pred             CCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCC-CCCEEEec--ccccCCcCceEEEEECHH--HHHHhh
Confidence            5    99999999999999999999987533221111112233 26777765  9987763 7888887653  323332


Q ss_pred             CC---ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh---cCCCeEEE
Q 010842          339 TD---PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVK---SDPRFEIV  412 (499)
Q Consensus       339 ~~---~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~---~~~~~~~~  412 (499)
                      ..   ...+.                ...+.....+.+.+++..+..-.-+++.++..++.+++++.|+   ..|.+..+
T Consensus       304 ~~~~~~~~~~----------------~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~  367 (448)
T 3dod_A          304 DDYENLKTFF----------------HGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQDLHALPHVGDI  367 (448)
T ss_dssp             SCGGGCCCCC----------------CCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTSTTEEEE
T ss_pred             hccccCCccc----------------ccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence            20   00000                0011122344444444443211112344555555555555554   44444332


Q ss_pred             cCCCceEEEEEecCCCCCCc--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          413 VPRHFALVCFRLNPYPHSGS--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       413 ~~~~~~~v~f~~~~~~~~~~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                       .+...++.+.+........  ........++.+.+.++|..+ .+.   + .++|+++ +...|+++|++++++|+++.
T Consensus       368 -~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~-~~~---~-~~iRi~~-~~~~t~e~i~~~l~~l~~~l  440 (448)
T 3dod_A          368 -RQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLT-RPL---G-DVIAFLP-PLASTAEELSEMVAIMKQAI  440 (448)
T ss_dssp             -EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEEC-CEE---T-TEEEECC-CTTCCHHHHHHHHHHHHHHH
T ss_pred             -EeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEE-ecc---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHH
Confidence             2333455666543210000  000011356778888888543 332   2 5799987 47789999999999999999


Q ss_pred             HHHhccC
Q 010842          491 DRLFKGS  497 (499)
Q Consensus       491 ~~l~~~~  497 (499)
                      +++...+
T Consensus       441 ~~~~~~~  447 (448)
T 3dod_A          441 HEVTSLE  447 (448)
T ss_dssp             HHHHTTC
T ss_pred             HHHhccc
Confidence            8876543

>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}

Probab=99.77  E-value=3e-17  Score=166.81  Aligned_cols=348  Identities=12%  Similarity=0.012  Sum_probs=206.6

Q ss_pred             HHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCC----
Q 010842           70 ETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLP----  145 (499)
Q Consensus        70 ~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~----  145 (499)
                      -.+.+.+...-.+...+.....++++-+.+..     .+.+..........|...++..++++++.+|+.   |..    
T Consensus        29 ~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v-----~~a~~~a~~~~~~~y~~~~g~~~lr~~ia~~~~---~~~~~~~  100 (409)
T 4eu1_A           29 LGLGQDFRMDPAKRKVNLSIGVYRDDADQPFV-----LECVKQATLGTNMDYAPVTGIASFVEEAQKLCF---GPTCAAL  100 (409)
T ss_dssp             HHHHHHHHHCCCSSCEECCCSSCCCTTSCCCC-----CHHHHTCCCCSCCCCCCTTCCHHHHHHHHHHHH---CSSCHHH
T ss_pred             HHHHHHHhhCCCcCceeeeeeEEECCCCCEee-----cHHHHhcCccccccCCCCCCcHHHHHHHHHHHc---CCCchhh
Confidence            34555555544444445544444444322221     222333333334566666677889998777763   443    


Q ss_pred             -CccccCCCccE--EEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC
Q 010842          146 -KTFMFSGTGGG--VIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV  222 (499)
Q Consensus       146 -~~~~~~~~~~g--~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~  222 (499)
                       ++       ..  ..|.||++|+..+...++..        ..++..|+++.++|.++...++..|.   +++.+|++.
T Consensus       101 ~~~-------~i~~~~~~~g~ga~~~~~~~~~~~--------~~~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~  162 (409)
T 4eu1_A          101 RDG-------RIASCQTLGGTGALRIGGDLLNRF--------VANCNRIYGPDVGYPNHESIFAKAGM---ELTPYSYYD  162 (409)
T ss_dssp             HTT-------CEEEEEESHHHHHHHHHHHHGGGT--------SSSCCEEEEESSCCTHHHHHHHHTTC---EEEEECCEE
T ss_pred             ccC-------ceeeeecccchHHHHHHHHHHHHh--------cCCCCEEEEeCCCcHhHHHHHHHcCC---eEEEEEeec
Confidence             22       12  34888998877655443221        01457889999999999999999999   999999853


Q ss_pred             CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEEeeccccchhccCc--cchh
Q 010842          223 DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVHVDAAYAGSACICP--EFRH  297 (499)
Q Consensus       223 ~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~--~~~~  297 (499)
                      ++++.+|+++|++.+++.   .....+++.+.++||||.+-+   +++|+++|++||+++++|.+|+++.....  ....
T Consensus       163 ~~~~~~d~~~l~~~l~~~---~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~  239 (409)
T 4eu1_A          163 PATKGLNLAGMLECLDKA---PEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFV  239 (409)
T ss_dssp             TTTTEECHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHH
T ss_pred             CcCCcCcHHHHHHHHHhC---CCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHH
Confidence            345799999999999642   112456777889999999966   55699999999999999999987654221  0111


Q ss_pred             h--hcCCCCCceeEecccccccCC-CcceEE--EEeCchh---HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC
Q 010842          298 Y--LNGIERVDSFSFSPHKWLLSY-LDCCCL--WVKQPGL---LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK  369 (499)
Q Consensus       298 ~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l--~~r~~~~---l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~  369 (499)
                      .  ..+...-..++.+..|.++.| ..+|++  ++.++..   +.+.+.....+..                 ..   ..
T Consensus       240 ~~~~~~~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~-----------------~~---~~  299 (409)
T 4eu1_A          240 PRHLVDMVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMY-----------------NN---PP  299 (409)
T ss_dssp             HHHHHTTSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHH-----------------SS---CC
T ss_pred             HHHHHhhCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhc-----------------CC---CC
Confidence            1  112212224566788998755 457886  6666541   1111111000000                 00   01


Q ss_pred             cHHHHHHHHHhc--------HHHHHHHHHHHHHHHHHHHHHHhcCCC---eEEEcCCCceEEEEEecCCCCCCcchhHHH
Q 010842          370 SLRLWMVLRSYG--------VLNLQSHIRSDIRLAKMFEGFVKSDPR---FEIVVPRHFALVCFRLNPYPHSGSADTEML  438 (499)
Q Consensus       370 al~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l~~~L~~~~~---~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~  438 (499)
                      .+..+++...+.        .+.++++.++..++++++.+.|++.+.   +++. +|..+.+.|  .+..          
T Consensus       300 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~-~~~~~~~~~--~~~~----------  366 (409)
T 4eu1_A          300 LYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKACGSVHDWSHI-ERQVGMMAY--TGLT----------  366 (409)
T ss_dssp             HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHH-HHSCSSEEE--CCCC----------
T ss_pred             hHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccee-cCCceEEEE--eCCC----------
Confidence            334444443332        234677788888999999999988631   4443 234444444  1211          


Q ss_pred             HHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          439 NRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       439 ~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                       .++..++. +.|+ ++.+.       .|++++ . .++++|++++++|+++.
T Consensus       367 -~~~~~~ll~~~gv-~v~p~-------~Ri~~~-~-~~~~~i~~~~~~l~~~l  408 (409)
T 4eu1_A          367 -REQVELLRSEYHI-YMTLN-------GRAAVS-G-LNSTNVEYVSQAIHNVT  408 (409)
T ss_dssp             -HHHHHHHHHHHCE-ECCTT-------CEEEGG-G-CCTTTHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHcCCE-EEcCC-------CEEEEE-e-cCHhhHHHHHHHHHHHh
Confidence             12334444 4464 34432       488885 3 45667999999998764

>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*

Probab=99.77  E-value=1.3e-16  Score=164.48  Aligned_cols=317  Identities=11%  Similarity=-0.028  Sum_probs=187.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEc-CCCCchhHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYG-SDQTHSTFAKVC  205 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~-s~~~H~s~~ka~  205 (499)
                      .....++.++++++++.+.+       ..++++|||+||..|+.+++......    |. ++..|++ ....|....-+.
T Consensus       117 ~~~~~~L~e~la~~~~~~~~-------~v~~~~sGseA~~~Alk~a~~~~~~~----g~~g~~~ii~~~~~yhg~~~~~~  185 (457)
T 3tfu_A          117 HEPAARLAKLLVDITPAGLD-------TVFFSDSGSVSVEVAAKMALQYWRGR----GLPGKRRLMTWRGGYHGDTFLAM  185 (457)
T ss_dssp             CHHHHHHHHHHHHHSSTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT----TCTTCCEEEEETTCCCCSSHHHH
T ss_pred             CHHHHHHHHHHHHhCCCCcC-------EEEEeCcHHHHHHHHHHHHHHHHHhc----CCCCCceEEEEcCCcCCccHHhh
Confidence            34455666779999975433       35999999999999999988643221    11 2334444 444454433333


Q ss_pred             HHhC-C---------CCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEec-CCCcccccCC----hhHHHH
Q 010842          206 KLAG-V---------SPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATV-GTTSTTAVDN----VEPLAE  270 (499)
Q Consensus       206 ~~~G-~---------g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~-gtt~~G~id~----l~~I~~  270 (499)
                      ...+ .         ....+..+|....+....|+++|+++|++..   ..+.+|++.. .++++|.+-|    +++|.+
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~---~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~  262 (457)
T 3tfu_A          186 SICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHA---GELAAVVVEPVVQGAGGMRFHDPRYLHDLRD  262 (457)
T ss_dssp             TTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHG---GGEEEEEECSSEECTTTCEECCTHHHHHHHH
T ss_pred             cccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCC---CCEEEEEEeCCCcCCCCcccCCHHHHHHHHH
Confidence            2211 0         0114455555433222468999999997532   1345666666 6788898866    999999


Q ss_pred             HHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC-cceEEEEeCchhHHHhhcC-CccCCCCCC
Q 010842          271 VANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL-DCCCLWVKQPGLLVKALST-DPEYLKNKP  348 (499)
Q Consensus       271 ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~r~~~~l~~~~~~-~~~yl~~~~  348 (499)
                      +|++||++|++|++|.++......+.....++ ..|.++++  |.++..+ ..|+++.+++  +.+.+.. .+.-+..  
T Consensus       263 l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~-~pdiit~s--K~l~gG~~~lG~v~~~~~--i~~~~~~~~~~~~~~--  335 (457)
T 3tfu_A          263 ICRRYEVLLIFDEIATGFGRTGALFAADHAGV-SPDIMCVG--KALTGGYLSLAATLCTAD--VAHTISAGAAGALMH--  335 (457)
T ss_dssp             HHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGGGTTSSCCEEEEEEHH--HHHHHHHSSSCSCCC--
T ss_pred             HHHHcCCEEEEEcCccCCccccchhHhHhcCC-CceEEEEC--hhhhCCCcceEEEEEcHH--HHHHhhccCCCceeE--
Confidence            99999999999999987532211111111233 36878664  8887653 6888888754  2233321 1110000  


Q ss_pred             CCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEcCCCceEEEEEec
Q 010842          349 SESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD---PRFEIVVPRHFALVCFRLN  425 (499)
Q Consensus       349 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v~f~~~  425 (499)
                                    ..+.....+.+.+++..+..-.-+++.++..++.+++++.|+++   |.+..+ .+...++.+.+.
T Consensus       336 --------------~~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~G~~~~i~l~  400 (457)
T 3tfu_A          336 --------------GPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTARALPAVTDV-RVCGAIGVIECD  400 (457)
T ss_dssp             --------------CCTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGGGSTTEEEE-EECSSCEEEEES
T ss_pred             --------------ecCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhcCCCeeee-ecCCeEEEEEEC
Confidence                          01111234444444444321111245666777888888888764   455433 233455666664


Q ss_pred             CCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          426 PYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       426 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      ...       +  ..++.++|.++|.++ .+  . + .++|+++. ...|++||++++++|+++.+++..
T Consensus       401 ~~~-------~--~~~~~~~l~~~Gv~v-~~--~-~-~~lRi~p~-~~~t~eei~~~l~~L~~~l~~~~~  455 (457)
T 3tfu_A          401 RPV-------D--LAVATPAALDRGVWL-RP--F-R-NLVYAMPP-YICTPAEITQITSAMVEVARLVGS  455 (457)
T ss_dssp             SCC-------C--HHHHHHHHHHTTEEC-CC--B-T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHHC--
T ss_pred             Ccc-------c--HHHHHHHHHHCCeEE-Ee--c-C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHhcc
Confidence            321       1  456778888888543 32  1 2 46999873 667999999999999999887643

>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}

Probab=99.77  E-value=3.6e-16  Score=160.88  Aligned_cols=327  Identities=13%  Similarity=0.081  Sum_probs=186.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEc-CCCCchhHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYG-SDQTHSTFAKVC  205 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~-s~~~H~s~~ka~  205 (499)
                      .....++.+.++++++.+.+       ..++|+|||+|+..++.+++.....    .|. ++..|++ +...|.+...++
T Consensus        92 ~~~~~~l~~~la~~~~~~~~-------~v~~~~ggsea~~~al~~~~~~~~~----~g~~~~~~vi~~~~~yhg~~~~~~  160 (449)
T 3a8u_X           92 HPLSFQLAEKITDLTPGNLN-------HVFFTDSGSECALTAVKMVRAYWRL----KGQATKTKMIGRARGYHGVNIAGT  160 (449)
T ss_dssp             CHHHHHHHHHHHTTSSTTEE-------EEEEESSHHHHHHHHHHHHHHHHHH----TTCTTCCEEEEETTCCCCSSHHHH
T ss_pred             CHHHHHHHHHHHHhCCCCCC-------EEEEcCcHHHHHHHHHHHHHHHHHh----cCCCCCCEEEEECCCcCCCChhhh
Confidence            33445566678888865433       3599999999999999888753211    011 2334444 555566666666


Q ss_pred             HHhCC-------C--CCCeEEeeCCCC--CCC-ccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC-
Q 010842          206 KLAGV-------S--PANIRALPTSVD--ANF-SLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN-  264 (499)
Q Consensus       206 ~~~G~-------g--~~~v~~v~~~~~--~~~-~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~-  264 (499)
                      ...|.       +  ...+..++++..  .+| .+|        +++|+++|++..  ...+.+|+++..++++|.+-| 
T Consensus       161 ~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~--~~~~~~vi~~p~~~~tG~~~~~  238 (449)
T 3a8u_X          161 SLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHD--ASNIAAVFVEPLAGSAGVLVPP  238 (449)
T ss_dssp             HHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTCBCCC
T ss_pred             hccCChhhccccCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCCCCccCC
Confidence            65542       1  014566665421  000 256        999999997531  012446666655567998888 


Q ss_pred             ---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCC
Q 010842          265 ---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD  340 (499)
Q Consensus       265 ---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~  340 (499)
                         +++|.++|++||+++++|++|.++......+.....++ ..|.+++  .|+++.. ...|++++++ +.. +.+...
T Consensus       239 ~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~-~~di~s~--sK~l~~G~~~~G~~~~~~-~~~-~~l~~~  313 (449)
T 3a8u_X          239 EGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGV-TPDLMCI--AKQVTNGAIPMGAVIAST-EIY-QTFMNQ  313 (449)
T ss_dssp             TTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEE--CGGGGTTSSCCEEEEEEH-HHH-HHHHTC
T ss_pred             HHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCC-CCCEEEE--cccccCCCCceEEEEECH-HHH-HHhhcc
Confidence               99999999999999999999965432211111111232 2677755  4998753 3488888875 322 333221


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE--cCCCce
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV--VPRHFA  418 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~--~~~~~~  418 (499)
                      ...  ...    .  .+   ....+.....+.+.+++..+..-.-+++.++..++.+++.+.|++++++.++  .++..+
T Consensus       314 ~~~--~~~----~--~~---~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~  382 (449)
T 3a8u_X          314 PTP--EYA----V--EF---PHGYTYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGL  382 (449)
T ss_dssp             SSC--TTS----C--SS---CCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETT
T ss_pred             Ccc--ccc----c--cc---cccCCCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEE
Confidence            000  000    0  00   0001111223433333333311001246777888888999888774332211  123445


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ++.+.+....  .....  ...++.+.|.++|+.+ .+.   + .++|+++. ..+|++|+++++++|+++.+++
T Consensus       383 ~~~i~~~~~~--~~~~~--~~~~~~~~l~~~Gv~v-~~~---g-~~iRis~~-~~~t~~~i~~~l~~l~~~l~~~  447 (449)
T 3a8u_X          383 AGAIQIAPRD--GDAIV--RPFEAGMALWKAGFYV-RFG---G-DTLQFGPT-FNSKPQDLDRLFDAVGEVLNKL  447 (449)
T ss_dssp             EEEEEECCBT--TBSSH--HHHHHHHHHHHHTEEC-EEE---T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHHC
T ss_pred             EEEEEEecCc--ccccc--cHHHHHHHHHHCCcEE-ecC---C-CEEEEECC-CcCCHHHHHHHHHHHHHHHHHH
Confidence            6777665321  00000  1224777777778543 332   3 67999974 6789999999999999987764

>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}

Probab=99.76  E-value=7e-16  Score=159.54  Aligned_cols=323  Identities=11%  Similarity=0.044  Sum_probs=188.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEc-CCCCchhHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYG-SDQTHSTFAKVC  205 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~-s~~~H~s~~ka~  205 (499)
                      .....++.+.++++++.+.+       ..++++|||+||..|+.+++......    |. ++..|++ ....|....-+.
T Consensus        98 ~~~~~~lae~l~~~~~~~~~-------~v~~~~sGseA~~~aik~a~~~~~~~----g~~~~~~ii~~~~~yHg~t~~~~  166 (472)
T 3hmu_A           98 HVPAIALAQKLAELAPGDLN-------HVFFAGGGSEANDTNIRMVRTYWQNK----GQPEKTVIISRKNAYHGSTVASS  166 (472)
T ss_dssp             CHHHHHHHHHHHHHSCTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT----TCTTCCEEEEETTCCCCSSHHHH
T ss_pred             CHHHHHHHHHHHHhCCCCCC-------EEEEeCCHHHHHHHHHHHHHHHHHhc----CCCCCCEEEEEcCcCCCccHHhh
Confidence            44555666778888865433       35999999999999999998743211    21 2333444 444455444333


Q ss_pred             HHhCC--------CCCCeEEeeCCC--C-CCCccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC--
Q 010842          206 KLAGV--------SPANIRALPTSV--D-ANFSLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN--  264 (499)
Q Consensus       206 ~~~G~--------g~~~v~~v~~~~--~-~~~~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~--  264 (499)
                      ...|.        ....+..+|...  . +++ +|        +++|++.|++..  ...+.+|++.-.+++.|.+-|  
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~epv~~~gG~~~~~~  243 (472)
T 3hmu_A          167 ALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLARARELEEAILELG--ENRVAAFIAEPVQGAGGVIVAPD  243 (472)
T ss_dssp             HHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTCBCCCT
T ss_pred             hccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHhcC--CCCEEEEEEcCccCCCCcccCCH
Confidence            33221        111455666432  0 111 34        788888886421  123456777667777888877  


Q ss_pred             --hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCc
Q 010842          265 --VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDP  341 (499)
Q Consensus       265 --l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~  341 (499)
                        +++|.++|++||++|++|++|.++......+.....++ ..|.++++  |.++.. ...|+++.+++  +.+.+..  
T Consensus       244 ~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v-~pdi~t~s--K~l~gg~~plG~v~~~~~--i~~~~~~--  316 (472)
T 3hmu_A          244 SYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGI-RPHIMTIA--KGLSSGYAPIGGSIVCDE--VAHVIGK--  316 (472)
T ss_dssp             THHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEEC--GGGTTTSSCCEEEEEEHH--HHHHHTT--
T ss_pred             HHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCC-CCceeeec--hhhhcCCcceEEEEECHH--HHHhccc--
Confidence              99999999999999999999987643222111112243 36888876  988765 46788887653  3234421  


Q ss_pred             cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHH-HHHHHHHHHHhc---CCCeEEEcCCCc
Q 010842          342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDI-RLAKMFEGFVKS---DPRFEIVVPRHF  417 (499)
Q Consensus       342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~-~~a~~l~~~L~~---~~~~~~~~~~~~  417 (499)
                      ..+..                ..+.....+...+++..+..-.-+++.++.. ++.+++++.|++   .|.+..+ .+..
T Consensus       317 ~~~~~----------------~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-r~~G  379 (472)
T 3hmu_A          317 DEFNH----------------GYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALTDHPLVGEA-KIVG  379 (472)
T ss_dssp             SCBCC----------------CCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGGGSTTEEEE-EEET
T ss_pred             CCccc----------------cCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecC
Confidence            11111                0111223455455444442111134556666 666777776654   3444433 2344


Q ss_pred             eEEEEEecCCCCC-Cc--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          418 ALVCFRLNPYPHS-GS--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       418 ~~v~f~~~~~~~~-~~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      .++.+.+...... ..  .........+.+.|.++|.++...    + .++|+++ ....|++||++++++|+++.+++.
T Consensus       380 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~p-~~~~t~e~i~~~l~~l~~~l~~~~  453 (472)
T 3hmu_A          380 MMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHV----G-DRMIISP-PLVITPAEIDEMFVRIRKSLDEAQ  453 (472)
T ss_dssp             TEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEE----T-TEEEECC-CTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEec----C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence            5566666432100 00  000233567888888889654432    2 6799997 367899999999999998876653

>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}

Probab=99.76  E-value=6.5e-16  Score=159.07  Aligned_cols=325  Identities=13%  Similarity=0.050  Sum_probs=179.3

Q ss_pred             hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEc-CCCCchhHHHH
Q 010842          126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYG-SDQTHSTFAKV  204 (499)
Q Consensus       126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~-s~~~H~s~~ka  204 (499)
                      .......++.++++++++.+..      ...+||+|||+||..|+.+++...         ++..|++ ....|....-+
T Consensus       104 ~~~~~~~~la~~l~~~~~~~~~------~~v~~~~sGseA~~~alk~a~~~~---------g~~~ii~~~~~yhg~~~~~  168 (453)
T 4ffc_A          104 TPYEQYVQVAELLNALTPGDHD------KRTALFNSGAEAVENAIKVARLAT---------GRPAVVAFDNAYHGRTNLT  168 (453)
T ss_dssp             SCCHHHHHHHHHHHHHSSCSSC------EEEEEESSHHHHHHHHHHHHHHHH---------CCCEEEEETTCCCCSSHHH
T ss_pred             CCCHHHHHHHHHHHHhCCCCCC------cEEEEeCcHHHHHHHHHHHHHHhc---------CCCEEEEEcCccCCcchHH
Confidence            3456667777889999874321      135999999999999999887532         2333444 44446554444


Q ss_pred             HHHhCCC----------CCCeEEeeCCCC--CCCccC-HHHHHHHHHHHHH--cCCccEEEEEecCCCcccccCC----h
Q 010842          205 CKLAGVS----------PANIRALPTSVD--ANFSLS-PQLLRRAVEADVE--AGLVPLFLCATVGTTSTTAVDN----V  265 (499)
Q Consensus       205 ~~~~G~g----------~~~v~~v~~~~~--~~~~~d-~~~L~~~i~~~~~--~g~~p~~vv~t~gtt~~G~id~----l  265 (499)
                      ....|..          ...+..+|....  +.+.++ .+.++..++.-.+  ....+.+|++.-.++..|.+-|    +
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l  248 (453)
T 4ffc_A          169 MALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQIGAQSLAAIIIEPIQGEGGFIVPAPGFL  248 (453)
T ss_dssp             HHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTSBCCCTTHH
T ss_pred             HhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHhcCCCCEEEEEEcCCCCCCCcccCCHHHH
Confidence            4443321          114666665421  111233 2333332222111  1123444555444444566655    9


Q ss_pred             hHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCC
Q 010842          266 EPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLK  345 (499)
Q Consensus       266 ~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~  345 (499)
                      ++|.++|++||++|++|++|.++......+.....++ ..|.++++  |.++.....|+++.+++  +.+.+...   . 
T Consensus       249 ~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~-~pdi~t~s--K~~~~G~~~G~~~~~~~--i~~~~~~~---~-  319 (453)
T 4ffc_A          249 ATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGI-VPDIVTMA--KGIAGGMPLSAVTGRAE--LMDAVYAG---G-  319 (453)
T ss_dssp             HHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGGGTTSSCEEEEEEHH--HHTTSCTT---S-
T ss_pred             HHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCC-CcchHhhh--hhhcCCcCeEEEEECHH--HHhhhccc---C-
Confidence            9999999999999999999987533221111112233 36777765  99877677888877543  22222110   0 


Q ss_pred             CCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH----hcCCCeEEEcCCCceEEE
Q 010842          346 NKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFV----KSDPRFEIVVPRHFALVC  421 (499)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L----~~~~~~~~~~~~~~~~v~  421 (499)
                      .                ..+.....+...+++..+..-.-+++.++..++.+++++.|    .+.|.+..+ .+...++.
T Consensus       320 ~----------------~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~~~g~~~~  382 (453)
T 4ffc_A          320 L----------------GGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALAEEVDIIGEV-RGRGAMLA  382 (453)
T ss_dssp             S----------------CCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCSSEEEE-EEETTEEE
T ss_pred             c----------------CCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhhCCCeEEE-EeeceEEE
Confidence            0                01111234444444444321111234444455555555544    445655443 23344566


Q ss_pred             EEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842          422 FRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       422 f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~  496 (499)
                      +.+....  ..........++.+.+.++|.++.....+  ..++|+++ +...|+++|++++++|+++.+++.+.
T Consensus       383 ~~~~~~~--~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~~~~  452 (453)
T 4ffc_A          383 IEIVKPG--TLEPDAALTKSIAAEALSQGVLILTCGTF--GNVIRLLP-PLVIGDDLLDEGITALSDIIRAKASH  452 (453)
T ss_dssp             EEEBCTT--SCCBCHHHHHHHHHHHHHTTEECCEECTT--SCEEEECC-CTTCCHHHHHHHHHHHHHHHHHHC--
T ss_pred             EEEecCc--ccCCCHHHHHHHHHHHHhCCCEEecCCCC--CCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            6554311  00111344677888888899554333221  25699988 37789999999999999999887643

>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*

Probab=99.76  E-value=3.8e-16  Score=161.14  Aligned_cols=325  Identities=11%  Similarity=0.026  Sum_probs=185.3

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCC-chhHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQT-HSTFAKV  204 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~-H~s~~ka  204 (499)
                      ......++.++++++++.+.+       ..++++|||+|+..++.+++......    |. ++..|++...+ |....-+
T Consensus        92 ~~~~~~~la~~l~~~~~~~~~-------~v~~~~ggseA~~~al~~~~~~~~~~----g~~~~~~vi~~~~~yhg~~~~~  160 (459)
T 4a6r_A           92 THPAVVELSSLLAEVTPAGFD-------RVFYTNSGSESVDTMIRMVRRYWDVQ----GKPEKKTLIGRWNGYHGSTIGG  160 (459)
T ss_dssp             CCHHHHHHHHHHHHHSCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHT----TCTTCCEEEEETTCCCCSSHHH
T ss_pred             CCHHHHHHHHHHHHhCCCCCC-------EEEEeCchHHHHHHHHHHHHHHHHhc----CCCCCCEEEEECCCcCCccHHH
Confidence            456667788889999876443       35999999999999999998643211    21 23445444444 5444333


Q ss_pred             HHHhCCC---------CCCeEEeeCCC--C-CCCccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842          205 CKLAGVS---------PANIRALPTSV--D-ANFSLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN  264 (499)
Q Consensus       205 ~~~~G~g---------~~~v~~v~~~~--~-~~~~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~  264 (499)
                      ....|..         ...+..++...  . +++ +|        +++|+++|++..  ...+.+|++...+++.|.+-+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~~~~~~le~~i~~~~--~~~~~~vi~ep~~~~~G~~~~  237 (459)
T 4a6r_A          161 ASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGVVAARWLEEKILEIG--ADKVAAFVGEPIQGAGGVIVP  237 (459)
T ss_dssp             HHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTCBCC
T ss_pred             HhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHHHHHHHHHHHHHHcC--CCCEEEEEECCccCCCCcccC
Confidence            3333321         11445555332  0 112 45        788988886521  123456666666667788777


Q ss_pred             ----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC
Q 010842          265 ----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST  339 (499)
Q Consensus       265 ----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~  339 (499)
                          +++|.++|++||+++++|++|.++......+.....++ ..|.++++  |.++.. ...|+++.+++  +.+.+..
T Consensus       238 ~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~-~pdi~t~s--K~l~gg~~~lg~v~~~~~--i~~~~~~  312 (459)
T 4a6r_A          238 PATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGF-QPDLFTAA--KGLSSGYLPIGAVFVGKR--VAEGLIA  312 (459)
T ss_dssp             CTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTC-CCSEEEEC--GGGGTTSSCCEEEEECHH--HHHHHHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeehh--hhhcCCCCCccceeeCHH--HHHHhhc
Confidence                99999999999999999999987533221111112233 36888875  988765 46788877543  2222221


Q ss_pred             CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHH-HHHHHHH----HHHhcCCCeEEEcC
Q 010842          340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDI-RLAKMFE----GFVKSDPRFEIVVP  414 (499)
Q Consensus       340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~-~~a~~l~----~~L~~~~~~~~~~~  414 (499)
                      ...+...                 .+.....+...+++..+..-.-++++++.. ++.++++    +.|.+.|.+..+ .
T Consensus       313 ~~~~~~~-----------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~  374 (459)
T 4a6r_A          313 GGDFNHG-----------------FTYSGHPVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFSRFEHVDDV-R  374 (459)
T ss_dssp             HCTTHHH-----------------HHHCSCHHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHTTCTTEEEE-E
T ss_pred             CCCcccC-----------------CCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-E
Confidence            0000000                 001112344444444432100123344444 4444444    444556655544 3


Q ss_pred             CCceEEEEEecCCCCCCc--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          415 RHFALVCFRLNPYPHSGS--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       415 ~~~~~v~f~~~~~~~~~~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      +...++.+.+........  ........++.+.+.++|.++...    + .++|+++ +...|++++++++++|+++.++
T Consensus       375 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~----g-~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~  448 (459)
T 4a6r_A          375 GVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRAC----G-DHIVSAP-PLVMTRAEVDEMLAVAERCLEE  448 (459)
T ss_dssp             EETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEE----T-TEEEECC-CTTCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecC----C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHH
Confidence            344556666543210000  001233567788888888554332    2 6799997 3678999999999999998877


Q ss_pred             Hh
Q 010842          493 LF  494 (499)
Q Consensus       493 l~  494 (499)
                      +.
T Consensus       449 ~~  450 (459)
T 4a6r_A          449 FE  450 (459)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}

Probab=99.75  E-value=4e-17  Score=165.68  Aligned_cols=251  Identities=10%  Similarity=0.048  Sum_probs=167.7

Q ss_pred             hhHHHHHHHHHHHHHHcCCCCccccCCCccEEE---cCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCC-CCchhH
Q 010842          126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVI---QNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSD-QTHSTF  201 (499)
Q Consensus       126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~---t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~-~~H~s~  201 (499)
                      ...++|+.    +++++|.+..         ++   ++|||+||..++.+..+           ++..|+++. ..|...
T Consensus        75 g~~~Le~~----lA~l~g~e~a---------lv~p~~~sGt~A~~~al~all~-----------pGD~Vl~~~~~~y~~~  130 (427)
T 3hvy_A           75 GRDSLDRV----YANIFNTESA---------FVRPHFVNGTHAIGAALFGNLR-----------PNDTMMSICGMPYDTL  130 (427)
T ss_dssp             HHHHHHHH----HHHHHTCSEE---------EEETTCCSHHHHHHHHHHHTCC-----------TTCEEEECSSSCCGGG
T ss_pred             hHHHHHHH----HHHHhCCCce---------EEeCCCCcHHHHHHHHHHHhcC-----------CCCEEEEeCCCCchhH
Confidence            34556654    8999998764         66   89999999887776532           567788887 777655


Q ss_pred             H-----------HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEec----CCCcccccCChh
Q 010842          202 A-----------KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATV----GTTSTTAVDNVE  266 (499)
Q Consensus       202 ~-----------ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~----gtt~~G~id~l~  266 (499)
                      .           ..++..|+   +++.||. ++  +.+|+++|++++++.    .++.+|+++.    ++|++|.+.|++
T Consensus       131 ~~~~g~~~~~~~~~l~~~G~---~~~~v~~-~~--~~~d~e~l~~~i~~~----~~tklV~i~~s~gyp~nptg~v~dl~  200 (427)
T 3hvy_A          131 HDIIGMDDSKKVGSLREYGV---KYKMVDL-KD--GKVDINTVKEELKKD----DSIKLIHIQRSTGYGWRKSLRIAEIA  200 (427)
T ss_dssp             HHHHTCCTTCCSCCTGGGTC---EEEECCC-BT--TBCCHHHHHHHHHHC----TTEEEEEEESSCCSSSSCCCCHHHHH
T ss_pred             HHHhccccchhhhHHHHcCC---EEEEecC-CC--CCcCHHHHHHHhhCC----CCCEEEEEECCCCCCCCccccHHHHH
Confidence            4           33455688   8888887 33  589999999999731    1245788888    899999999999


Q ss_pred             HHHHHHHH--hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC--CcceEEEEeCchhHHHhhcC--C
Q 010842          267 PLAEVANE--YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY--LDCCCLWVKQPGLLVKALST--D  340 (499)
Q Consensus       267 ~I~~ia~~--~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p--~~~g~l~~r~~~~l~~~~~~--~  340 (499)
                      +|+++|++  +|++++||+||+.+.....   ....   ++|.++.+.||+++.+  ...|+++.+ ++.. +.+..  .
T Consensus       201 ~i~~ia~~~~~g~~livD~a~~~~~~~~~---p~~~---gaDiv~~S~sK~lgg~g~~~GG~i~~~-~~li-~~l~~~~~  272 (427)
T 3hvy_A          201 EIIKSIREVNENVIVFVDNCYGEFVEEKE---PTDV---GADIIAGSLIKNIGGGIATTGGYIAGK-EEYV-TQATFRVT  272 (427)
T ss_dssp             HHHHHHHHHCSSSEEEEECTTCTTTSSSC---GGGG---TCSEEEEETTSGGGTTTCCSCEEEEEC-HHHH-HHHHHHHS
T ss_pred             HHHHHHHHhCCCCEEEEECCccccccCCC---Cccc---CCeEEEECCcccccccccceEEEEEEC-HHHH-HHHHHHhh
Confidence            99999999  8999999999987652211   1111   3899999999999873  234777665 3332 22211  1


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce--
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA--  418 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~--  418 (499)
                      ...+.                ...+-.+..  .|+.++.  ......++++..+++.++++.|+++ ++++... ...  
T Consensus       273 ~~~~g----------------~~~~~~~~~--a~~~~~g--l~~~~~r~~~~~~~a~~la~~L~~~-g~~V~p~-~~~~~  330 (427)
T 3hvy_A          273 VPGIG----------------GECGSTFGV--MRSLYEG--LFMAPHVTIEAVKGAVFCARIMELA-GFDVLPK-YNDKR  330 (427)
T ss_dssp             CTTTG----------------GGCCCCTTC--HHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHT-TCEEESC-TTSCC
T ss_pred             cCCcc----------------cccCCCHHH--HHHHHHh--HhHHHHHHHHHHHHHHHHHHHHHhC-CCeecCC-CCCCC
Confidence            11111                011111111  3444433  3555678889999999999999998 5677533 223  


Q ss_pred             ---EEEEEecCCCCCCcchhHHHHHHHHHHHHhc
Q 010842          419 ---LVCFRLNPYPHSGSADTEMLNRKLLDWVNST  449 (499)
Q Consensus       419 ---~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~  449 (499)
                         +++|.+..         .+...++++.|...
T Consensus       331 ~~li~~~~l~~---------~~~~~~f~~~l~~~  355 (427)
T 3hvy_A          331 TDIIQAIKFND---------EKKLIDFIKGIQTA  355 (427)
T ss_dssp             SSSEEEEECSS---------HHHHHHHHHHHHHT
T ss_pred             ceEEEEEeCCC---------HHHHHHHHHHhccc
Confidence               67777743         23455666666553

>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*

Probab=99.75  E-value=1e-15  Score=158.00  Aligned_cols=330  Identities=12%  Similarity=0.024  Sum_probs=188.1

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcC-CCCchhHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGS-DQTHSTFAKV  204 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s-~~~H~s~~ka  204 (499)
                      ......++.++++++++.+.+       ..++|+|||+||..|+.+++......    |. ++..|++. ...|....-+
T Consensus        93 ~~~~~~~la~~l~~~~~~~~~-------~v~~~~gGseA~~~al~~~~~~~~~~----g~~~~~~vi~~~~~yhg~~~~~  161 (460)
T 3gju_A           93 GTEASITLAKMIIDRAPKGMS-------RVYFGLSGSDANETNIKLIWYYNNVL----GRPEKKKIISRWRGYHGSGVMT  161 (460)
T ss_dssp             CCHHHHHHHHHHHHHSCTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHT----TCTTCCEEEEETTCCCCSSHHH
T ss_pred             CCHHHHHHHHHHHhhCCCCcC-------EEEEeCchHHHHHHHHHHHHHHHHhc----CCCCCCEEEEECCCcCCCCHHH
Confidence            345666777889998765433       35999999999999999988643211    21 23445444 4445554444


Q ss_pred             HHHhCC---------CCCCeEEeeCCCC---CCCccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842          205 CKLAGV---------SPANIRALPTSVD---ANFSLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN  264 (499)
Q Consensus       205 ~~~~G~---------g~~~v~~v~~~~~---~~~~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~  264 (499)
                      ....|.         ....+..+|....   +++.++        +++|+++|++..  ...+.+|++...++++|.+-+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~le~~i~~~~--~~~~aaii~ep~~~~~G~~~~  239 (460)
T 3gju_A          162 GSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCADKLEEMILAEG--PETIAAFIGEPILGTGGIVPP  239 (460)
T ss_dssp             HHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCC
T ss_pred             hhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCCccC
Confidence            443322         1114566664320   111233        688988887421  123456777777777787655


Q ss_pred             ----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC
Q 010842          265 ----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST  339 (499)
Q Consensus       265 ----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~  339 (499)
                          +++|+++|++||++|++|.+|.++......+.....++ ..|.++++  |.++.. ...|+++.+++  +.+.+..
T Consensus       240 ~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~-~pdi~t~s--K~l~gG~~~lg~v~~~~~--i~~~~~~  314 (460)
T 3gju_A          240 PAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGI-KPDLITIA--KGLTSAYAPLSGVIVADR--VWQVLVQ  314 (460)
T ss_dssp             CTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTC-CCSEEEEC--GGGTTTSSCCEEEEEEHH--HHHHHHH
T ss_pred             CHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCC-CCCeeeee--hhhcCCCCCeEEEEECHH--HHHHHhc
Confidence                99999999999999999999987633221111112233 36778775  998765 46788887654  2233311


Q ss_pred             C---ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---cHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          340 D---PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---GVLN-LQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       340 ~---~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                      .   ...+...                .+.....+...+++..+   ..+. +++..+....+.+.+.+.+.+.|.+..+
T Consensus       315 ~~~~~~~~~~~----------------~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~  378 (460)
T 3gju_A          315 GSDKLGSLGHG----------------WTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAKAVGGHKNVGEV  378 (460)
T ss_dssp             HHHHHCSCSCC----------------CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTSTTEEEE
T ss_pred             ccccccccccC----------------CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence            0   0001100                11112234444444443   2232 2223333333444555555666665544


Q ss_pred             cCCCceEEEEEecCCCCCCc--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          413 VPRHFALVCFRLNPYPHSGS--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       413 ~~~~~~~v~f~~~~~~~~~~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                       .+...++.+.+........  ........++.+.+.++|.++....   +..++|+++. ...|+++|++++++|+++.
T Consensus       379 -~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---~~~~iRi~~~-~~~t~e~i~~~l~~l~~~l  453 (460)
T 3gju_A          379 -RGDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP---QGDILGFAPP-LCLTREQADIVVSKTADAV  453 (460)
T ss_dssp             -EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS---SSCEEEECCC-TTCCHHHHHHHHHHHHHHH
T ss_pred             -eeeeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC---CCCEEEEECC-CCCCHHHHHHHHHHHHHHH
Confidence             3334556666543210000  0011235677888888896443322   3467999973 6789999999999999998


Q ss_pred             HHHhc
Q 010842          491 DRLFK  495 (499)
Q Consensus       491 ~~l~~  495 (499)
                      +++.+
T Consensus       454 ~~~~~  458 (460)
T 3gju_A          454 KSVFA  458 (460)
T ss_dssp             HHHHC
T ss_pred             HHHHh
Confidence            87654

>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A

Probab=99.75  E-value=9.2e-16  Score=157.87  Aligned_cols=338  Identities=12%  Similarity=0.071  Sum_probs=186.5

Q ss_pred             HHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc
Q 010842          106 LGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN  185 (499)
Q Consensus       106 ~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g  185 (499)
                      +.+.+...+... ..+.......+...++.++++++++.+..      ...+||+|||+||..|+.+++...        
T Consensus        82 v~~A~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~~~~~------~~v~~~~sGseA~~~Alk~a~~~~--------  146 (451)
T 3oks_A           82 VVEAVRSQVGDF-THTCFMVTPYEGYVAVCEQLNRLTPVRGD------KRSALFNSGSEAVENAVKIARSHT--------  146 (451)
T ss_dssp             HHHHHHHHHTTC-SCCTTTTSCCHHHHHHHHHHHHHSSCCSS------EEEEEESSHHHHHHHHHHHHHHHH--------
T ss_pred             HHHHHHHHHHhc-ccccCCccCCHHHHHHHHHHHHhCCcCCC------CEEEEeCcHHHHHHHHHHHHHHhc--------
Confidence            344444444432 12222223455666778889999874321      135999999999999999988642        


Q ss_pred             cCCeEEEc-CCCCchhHHHHHHHhCCC----------CCCeEEeeCCCC------C--CCc---cCHHHHHHHHHHHHHc
Q 010842          186 MHKLVVYG-SDQTHSTFAKVCKLAGVS----------PANIRALPTSVD------A--NFS---LSPQLLRRAVEADVEA  243 (499)
Q Consensus       186 ~~~~~i~~-s~~~H~s~~ka~~~~G~g----------~~~v~~v~~~~~------~--~~~---~d~~~L~~~i~~~~~~  243 (499)
                       ++..|++ ....|....-+....|-.          ...+..+|....      +  ...   -+++.+++.|++.. .
T Consensus       147 -g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~-~  224 (451)
T 3oks_A          147 -HKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAITVIDKQI-G  224 (451)
T ss_dssp             -CCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHHHHHHHT-C
T ss_pred             -CCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHHHHHhhc-C
Confidence             2334444 444454444444332210          114667766410      0  001   13455555555321 1


Q ss_pred             CCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC
Q 010842          244 GLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY  319 (499)
Q Consensus       244 g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p  319 (499)
                      ...+.+|++.-.+++.|.+-|    +++|.++|++||+++++|++|.++......+.....++ ..|.++++  |.++..
T Consensus       225 ~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~t~s--K~l~~G  301 (451)
T 3oks_A          225 ADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGI-DPDLIVTA--KGIAGG  301 (451)
T ss_dssp             GGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTC-CCSEEEEC--GGGGTT
T ss_pred             CCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCC-CCCeeeeh--hhhhCC
Confidence            223445555555555666655    99999999999999999999987533221111112233 36777665  999877


Q ss_pred             CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 010842          320 LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMF  399 (499)
Q Consensus       320 ~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l  399 (499)
                      ...|+++.+++  +.+.+...   .                 ...+.....+...+++..+..-.-+++.++..++.+++
T Consensus       302 ~~iG~v~~~~~--~~~~~~~~---~-----------------~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l  359 (451)
T 3oks_A          302 LPLSAVTGRAE--IMDSPHVS---G-----------------LGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIM  359 (451)
T ss_dssp             SSCEEEEEEHH--HHTCSCTT---S-----------------BCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred             cceEEEEECHH--HHhhhcCC---C-----------------cCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence            77888877543  22222110   0                 00111223455555544442111123445555555555


Q ss_pred             HHHHh----cCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCc
Q 010842          400 EGFVK----SDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTD  475 (499)
Q Consensus       400 ~~~L~----~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t  475 (499)
                      ++.|+    +.|.+..+ .+...++.+.+....  ..........++.+.+.++|.++.....+  ..++|+++ +...|
T Consensus       360 ~~~L~~~~~~~~~~~~~-~~~G~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~--~~~iRi~~-~~~~t  433 (451)
T 3oks_A          360 KDRLGRLQAEDDRIGDV-RGRGAMIAMELVKAG--TTEPDADLTKALCAGAHAAGVIVLSCGTY--GNVVRFLP-PLSIG  433 (451)
T ss_dssp             HHHHHHHHHHCTTEEEE-EEETTEEEEEEBSTT--SCCBCHHHHHHHHHHHHHTTEECEEECTT--SCEEEECC-CTTCC
T ss_pred             HHHHHHHHhhCCCeEEE-EEeeEEEEEEEecCc--cCCCCHHHHHHHHHHHHhCCcEEecCCCC--CCEEEEEC-CCCCC
Confidence            55554    45655443 233445666654311  00011344667888888999654443221  24699987 37789


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010842          476 ERHVVAAWELIMEGAD  491 (499)
Q Consensus       476 ~~di~~l~~~l~~~~~  491 (499)
                      +++|++++++|.++.+
T Consensus       434 ~e~i~~~l~~l~~~l~  449 (451)
T 3oks_A          434 DDLLNEGLDVLEEVLR  449 (451)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999998765

>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*

Probab=99.75  E-value=1.6e-16  Score=162.51  Aligned_cols=310  Identities=12%  Similarity=0.022  Sum_probs=176.0

Q ss_pred             HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC
Q 010842          130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG  209 (499)
Q Consensus       130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G  209 (499)
                      ...++.+.++++++-++        ..++++|||+||..++.+++...       + ++.+|......|.+...++...|
T Consensus        94 ~~~~l~~~la~~~~~~~--------~v~~~~~Gsea~~~ai~~a~~~~-------~-~~~vi~~~~~yhg~~~~~~~~~g  157 (429)
T 3k28_A           94 IENKLAKLVIERVPSIE--------IVRMVNSGTEATMSALRLARGYT-------G-RNKILKFIGCYHGHGDSLLIKAG  157 (429)
T ss_dssp             HHHHHHHHHHHHSTTCS--------EEEEESSHHHHHHHHHHHHHHHH-------T-CCEEEEEETCCCCSCGGGCSSCC
T ss_pred             HHHHHHHHHHHhCCCCC--------EEEEeCChHHHHHHHHHHHHHhh-------C-CCEEEEECCCcCCCcHHHHHhcC
Confidence            33444455888875222        35999999999999999887542       0 23344444445544443333333


Q ss_pred             CCCCCeEEeeCCCCCCCc------------cCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHH
Q 010842          210 VSPANIRALPTSVDANFS------------LSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVAN  273 (499)
Q Consensus       210 ~g~~~v~~v~~~~~~~~~------------~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~  273 (499)
                      .   .+..++......+.            -|+++|++++++..   ..+.+|++...++++|.+.|    +++|.++|+
T Consensus       158 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~  231 (429)
T 3k28_A          158 S---GVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFG---DDIACVIVEPVAGNMGVVPPQPGFLEGLREVTE  231 (429)
T ss_dssp             T---TC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHH
T ss_pred             C---cccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCC---CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHH
Confidence            3   22222111111010            18999999987532   12456777766777888888    999999999


Q ss_pred             HhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842          274 EYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS  353 (499)
Q Consensus       274 ~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~  353 (499)
                      +||+++|+|++|.++ ...........++ ..|.++++  |.++.+..+|+++.+++  +.+.+.......         
T Consensus       232 ~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~iG~~~~~~~--~~~~~~~~~~~~---------  296 (429)
T 3k28_A          232 QNGALLIFDEVMTGF-RVAYNCGQGYYGV-TPDLTCLG--KVIGGGLPVGAYGGKAE--IMRQVAPSGPIY---------  296 (429)
T ss_dssp             HHTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEEEEC--GGGGTTSCCEEEEECHH--HHTTBTTTSSBC---------
T ss_pred             HcCCEEEEecccccc-ccCcchHHHHhCC-CCceehhh--hhhcCCCCeEEEEEcHH--HHhhhccCCCcc---------
Confidence            999999999999775 3221111112233 26777764  98877777898877542  222222110000         


Q ss_pred             cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEEcCCCceEEEEEecCCCC
Q 010842          354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PRFEIVVPRHFALVCFRLNPYPH  429 (499)
Q Consensus       354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~~~~~~~~~~~~v~f~~~~~~~  429 (499)
                              ...+.....+.+.+++..+.... ++..++..++++++.+.|+++    +.+..+ ++....+.+.+.....
T Consensus       297 --------~~~t~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~  366 (429)
T 3k28_A          297 --------QAGTLSGNPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLRKAAEKHGIPHHI-NRAGSMIGIFFTDEPV  366 (429)
T ss_dssp             --------CCCTTTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHTTCCCEE-EEETTEEEEESSSSCC
T ss_pred             --------ccCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhhCCCCEEE-EeeccEEEEEEecCCc
Confidence                    01111223455555554442111 566777777777777777653    332222 2334455665532210


Q ss_pred             CC----cchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          430 SG----SADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       430 ~~----~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ..    .........++.+.+.++|..+ .+.   +...+|+++   .+|++|+++++++|+++.+++
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~l~~~Gv~v-~~~---~~~~~r~~~---~~t~e~i~~~l~~l~~~l~~~  427 (429)
T 3k28_A          367 INYDAAKSSNLQFFAAYYREMVEQGVFL-PPS---QFEGLFLST---VHSDADIEATIAAAEIAMSKL  427 (429)
T ss_dssp             CSHHHHTTSCHHHHHHHHHHHHHTTEEC-CSS---TTSCBCCCT---TCCHHHHHHHHHHHHHHHHTC
T ss_pred             ccccccccccHHHHHHHHHHHHHCCeEE-ecC---CCCCEEEEC---CCCHHHHHHHHHHHHHHHHHH
Confidence            00    0001234567788888888543 332   224577754   479999999999999987654

>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}

Probab=99.75  E-value=1.1e-15  Score=158.17  Aligned_cols=330  Identities=12%  Similarity=0.021  Sum_probs=192.8

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEc-CCCCchhHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYG-SDQTHSTFAKV  204 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~-s~~~H~s~~ka  204 (499)
                      ......++.+|++++++.+.+       ..++++|||+||..|+.+++......    |. ++..|++ ....|....-+
T Consensus        95 ~~~~~~~la~~l~~~~~~~~~-------~v~~~~sGseA~~~Aik~a~~~~~~~----g~~~~~~vi~~~~~yHg~~~~~  163 (476)
T 3i5t_A           95 ATSPAARLAEKIATLTPGDLN-------RIFFTTGGSTAVDSALRFSEFYNNVL----GRPQKKRIIVRYDGYHGSTALT  163 (476)
T ss_dssp             BCHHHHHHHHHHHTTSSTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHT----TCTTCCEEEEETTCCCCSSHHH
T ss_pred             CCHHHHHHHHHHHhcCCCCcC-------EEEEeCchHHHHHHHHHHHHHHHHhc----CCCCCCEEEEEcCCcCcCChhh
Confidence            456777788889999865433       35999999999999999998653221    21 2333444 44446555444


Q ss_pred             HHHhCCC---------CCCeEEeeCCCC-CCCccC--------HHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC--
Q 010842          205 CKLAGVS---------PANIRALPTSVD-ANFSLS--------PQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN--  264 (499)
Q Consensus       205 ~~~~G~g---------~~~v~~v~~~~~-~~~~~d--------~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~--  264 (499)
                      ....|..         ...+..++.... ..+..|        +++|+++|++..  ...+.+|++....++.|.+-+  
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~~aavi~ep~~~~~G~~~~~~  241 (476)
T 3i5t_A          164 AACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFEDRIESLG--PDTIAAFLAEPILASGGVIIPPA  241 (476)
T ss_dssp             HHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBTTTTSBCCCT
T ss_pred             ccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHHHHHHhcC--CCCEEEEEECCccCCCCcccCCH
Confidence            4433320         123445553210 001223        789999887421  123456777777777887655  


Q ss_pred             --hhHHHHHHHHhCCEEEeeccccchhccCccchhh-hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCC
Q 010842          265 --VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY-LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTD  340 (499)
Q Consensus       265 --l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~-~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~  340 (499)
                        |++|.++|++||++|++|++|.++......+... ..++ ..|.++++  |.++.. ...|+++.+++  +.+.+...
T Consensus       242 ~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v-~pdi~t~s--K~l~~G~~plg~v~~~~~--i~~~~~~~  316 (476)
T 3i5t_A          242 GYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGV-VPDIITFA--KGVTSGYVPLGGLAISEA--VLARISGE  316 (476)
T ss_dssp             THHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCC-CCSEEEEC--GGGGTTSSCCEEEEECHH--HHHTTSGG
T ss_pred             HHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCC-Ccchhhhh--hhhcCCCcCeEEEEECHH--HHHHHhcC
Confidence              9999999999999999999998763322211111 2333 36888875  988766 56788887543  32333221


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEcCCCc
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD---PRFEIVVPRHF  417 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~  417 (499)
                      ....             ..+....+.....+.+.+++..+..-.-+++.++..++.+++++.|+++   |.+..+ .+..
T Consensus       317 ~~~~-------------~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-~~~G  382 (476)
T 3i5t_A          317 NAKG-------------SWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALASLRDLPGVAET-RSVG  382 (476)
T ss_dssp             GCTT-------------CEECCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTTTSTTEEEE-EEET
T ss_pred             Cccc-------------ccccccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE-EecC
Confidence            0000             0000011112234555555444421111356677777888888877754   444433 2334


Q ss_pred             eEEEEEecCCCCCCcch---hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          418 ALVCFRLNPYPHSGSAD---TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       418 ~~v~f~~~~~~~~~~~~---~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      .++.+.+.... .+...   .......+.+.+.++|.++. +.   | .++|+++. ...|+++|++++++|+++.+++.
T Consensus       383 ~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~Gv~v~-~~---g-~~iRi~p~-l~~t~e~i~~~l~~l~~~l~~~~  455 (476)
T 3i5t_A          383 LVGCVQCLLDP-TRADGTAEDKAFTLKIDERCFELGLIVR-PL---G-DLCVISPP-LIISRAQIDEMVAIMRQAITEVS  455 (476)
T ss_dssp             TEEEEEECCC------CCHHHHHHHHHHHHHHHHTTEECE-EE---T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeEEEEecCc-cccccccchhHHHHHHHHHHHHCCCEEE-ec---C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHHH
Confidence            45566654321 00000   11245678888888885443 32   3 67999973 66899999999999999988765


Q ss_pred             c
Q 010842          495 K  495 (499)
Q Consensus       495 ~  495 (499)
                      +
T Consensus       456 ~  456 (476)
T 3i5t_A          456 A  456 (476)
T ss_dssp             H
T ss_pred             H
Confidence            4

>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A

Probab=99.74  E-value=3.9e-16  Score=160.59  Aligned_cols=317  Identities=12%  Similarity=0.022  Sum_probs=181.4

Q ss_pred             HHHHHHHHHHHHHHcC-CCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH---hhhhccCCeEEEcCCCC-chhHH
Q 010842          128 TELEIVVMDWLATMLK-LPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA---VGAENMHKLVVYGSDQT-HSTFA  202 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g-~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~---~~~~g~~~~~i~~s~~~-H~s~~  202 (499)
                      .....++.+.++++++ .+.+       ..++++|||+||..|+.+++.....+   .+..+.++..|++.+.+ |....
T Consensus       100 ~~~~~~la~~la~~~~~~~~~-------~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~  172 (449)
T 2cjg_A          100 SVAMARFVETFARVLGDPALP-------HLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSG  172 (449)
T ss_dssp             CHHHHHHHHHHHHHHCCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSST
T ss_pred             CHHHHHHHHHHHHhcCCCCCC-------EEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCccc
Confidence            3344555566888876 2222       35999999999999999887432200   00001114456666554 43322


Q ss_pred             HHHHH--------hCCCC--CCeEEeeCCCCCCC--------ccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC
Q 010842          203 KVCKL--------AGVSP--ANIRALPTSVDANF--------SLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN  264 (499)
Q Consensus       203 ka~~~--------~G~g~--~~v~~v~~~~~~~~--------~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~  264 (499)
                      -+...        .|.+.  ..++.+|.+..+..        ..++++|+++|++.   +..+.+|+++..++++|.+-+
T Consensus       173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~---~~~~~~vi~ep~~~~~G~~~~  249 (449)
T 2cjg_A          173 YTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETR---PHDIACFVAEPIQGEGGDRHF  249 (449)
T ss_dssp             TGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHS---TTTEEEEEECSEETTTTCEEC
T ss_pred             chhhhcCCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhc---CCceEEEEEeCcCCCCCCccC
Confidence            22111        12211  25667776531001        25677788888642   123456666666678897766


Q ss_pred             ----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC
Q 010842          265 ----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD  340 (499)
Q Consensus       265 ----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~  340 (499)
                          +++|+++|++||+++++|++|+++......+.....++ ..|.++++  |++  |  .|+++.+++ .. +.+.  
T Consensus       250 ~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~-~~di~t~s--K~l--~--iG~~~~~~~-~~-~~l~--  318 (449)
T 2cjg_A          250 RPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDV-APDIVAFG--KKT--Q--VCGVMAGRR-VD-EVAD--  318 (449)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTC-CCSEEEEC--GGG--S--SEEEEECGG-GG-GSTT--
T ss_pred             CHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCC-CceEEEec--Ccc--c--EEEEEECHH-Hh-hhhh--
Confidence                99999999999999999999986533211111111233 36877765  988  4  788887653 22 1110  


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEEcCC
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPR-FEIVVPR  415 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~-~~~~~~~  415 (499)
                      +.++....             ...+-....+...+++..+..-.-+++.++..++++++.+.|++    .|. +..+ ++
T Consensus       319 ~~~~~~~~-------------~~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~~  384 (449)
T 2cjg_A          319 NVFAVPSR-------------LNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDP-RG  384 (449)
T ss_dssp             CTTTSTTS-------------SCCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEE-EE
T ss_pred             hcccCCcc-------------cccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-ee
Confidence            00110000             00011112344444433332100134567777888888888875    454 5433 33


Q ss_pred             CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       416 ~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ...++.+.+..         .....++.++|.++|.++...    +..++|+++ +..+|++||++++++|+++.+++
T Consensus       385 ~g~~~~~~~~~---------~~~~~~~~~~l~~~Gv~v~~~----g~~~iRi~~-~~~~t~e~i~~~l~~l~~~l~~~  448 (449)
T 2cjg_A          385 RGLMCAFSLPT---------TADRDELIRQLWQRAVIVLPA----GADTVRFRP-PLTVSTAEIDAAIAAVRSALPVV  448 (449)
T ss_dssp             ETTEEEEECSS---------HHHHHHHHHHHHHTTEECEEE----TTTEEEECC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             ccEEEEEEECC---------hHHHHHHHHHHHHCCeEEecC----CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHh
Confidence            44566666543         122456888888888544332    346799988 47789999999999999987764

>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0

Probab=99.74  E-value=3.5e-16  Score=160.14  Aligned_cols=308  Identities=12%  Similarity=0.029  Sum_probs=173.5

Q ss_pred             HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC-chhHHHHHHHh
Q 010842          130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT-HSTFAKVCKLA  208 (499)
Q Consensus       130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~-H~s~~ka~~~~  208 (499)
                      ...++.+++++.++-++        ..++++|||+|+..++.+++...         ++..|++...+ |.....+....
T Consensus        96 ~~~~l~~~la~~~~~~~--------~v~~~~sGsea~~~ai~~a~~~~---------~~~~vi~~~~~yhg~~~~~~~~~  158 (434)
T 3l44_A           96 LEVKFAKMLKEAMPALD--------KVRFVNSGTEAVMTTIRVARAYT---------GRTKIMKFAGCYHGHSDLVLVAA  158 (434)
T ss_dssp             HHHHHHHHHHHHCTTCS--------EEEEESSHHHHHHHHHHHHHHHH---------CCCEEEEETTCCCCSSGGGGBC-
T ss_pred             HHHHHHHHHHHhCCCCC--------EEEEeCchHHHHHHHHHHHHHhh---------CCCEEEEEcCccCCCcHHHHhhc
Confidence            34445566888886222        35999999999999999887642         33345544444 44333332222


Q ss_pred             CCCCC----------------CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHH
Q 010842          209 GVSPA----------------NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPL  268 (499)
Q Consensus       209 G~g~~----------------~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I  268 (499)
                      |.+..                .+..+|.       -|+++|++++++..   ..+.+|++...++++|.+.|    +++|
T Consensus       159 g~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l  228 (434)
T 3l44_A          159 GSGPSTLGTPDSAGVPQSIAQEVITVPF-------NNVETLKEALDKWG---HEVAAILVEPIVGNFGIVEPKPGFLEKV  228 (434)
T ss_dssp             ------CCCBSSTTCCHHHHTTEEEECT-------TCHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCTTHHHHH
T ss_pred             CCcccccCCCCcCCCCCcCCCceEecCc-------ccHHHHHHHHHhCC---CCEEEEEEcCCCCCCCCccCCHHHHHHH
Confidence            22100                1222221       18999999997632   12446666666677888887    9999


Q ss_pred             HHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCC
Q 010842          269 AEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKP  348 (499)
Q Consensus       269 ~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~  348 (499)
                      .++|++||++||+|++|.++ ...........++ ..|.++++  |.++.+...|+++.+++ .. +.+.......    
T Consensus       229 ~~l~~~~~illI~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~iG~~~~~~~-i~-~~~~~~~~~~----  298 (434)
T 3l44_A          229 NELVHEAGALVIYDEVITAF-RFMYGGAQDLLGV-TPDLTALG--KVIGGGLPIGAYGGKKE-IM-EQVAPLGPAY----  298 (434)
T ss_dssp             HHHHHTTTCEEEEECTTTTT-TSSSSCHHHHHTC-CCSEEEEE--GGGGTTSSCEEEEECHH-HH-TTBTTTSSBC----
T ss_pred             HHHHHHcCCEEEEeccccce-eccccHHHHHcCC-CCCeeehh--hhhcCCcCeeeEEEcHH-HH-HhhccCCCcc----
Confidence            99999999999999999876 3221111112233 26777664  88887788999876542 22 2222110000    


Q ss_pred             CCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEe
Q 010842          349 SESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRL  424 (499)
Q Consensus       349 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~  424 (499)
                                   ...+.....+.+.+++..+..-.-+++.++..++.+++++.|++    .+.+..+ ++..+++.+.+
T Consensus       299 -------------~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~g~~~~~~~  364 (434)
T 3l44_A          299 -------------QAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNIDITL-NRLKGALTVYF  364 (434)
T ss_dssp             -------------CCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEE-EEETTEEEEEE
T ss_pred             -------------cCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCCCEEE-EeeccEEEEEE
Confidence                         00111223444444444332100034555666666666666654    3332222 33445666665


Q ss_pred             cCCCCCCcc----hhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          425 NPYPHSGSA----DTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       425 ~~~~~~~~~----~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      ......+..    .......++.+.|.++|..+ .+.   +...+|+++   ..|++|+++++++|+++.+++.+
T Consensus       365 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v-~~~---~~~~~rl~~---~~t~e~i~~~l~~l~~~l~~~~~  432 (434)
T 3l44_A          365 TTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNL-APS---KYEAWFLTT---EHTKEDIEYTIEAVGRAFAALAD  432 (434)
T ss_dssp             SSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEEC-CSS---TTCCEECCT---TCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCcccchhhccccCHHHHHHHHHHHHHCCeEE-eec---CCCcEEEec---ccCHHHHHHHHHHHHHHHHHHHh
Confidence            332100000    01223466788888888543 322   223578754   47999999999999999887654

>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}

Probab=99.72  E-value=2.9e-15  Score=154.30  Aligned_cols=329  Identities=12%  Similarity=0.012  Sum_probs=182.1

Q ss_pred             HHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhh
Q 010842          105 FLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAE  184 (499)
Q Consensus       105 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~  184 (499)
                      .+.+.+...+... ..+   ....+++.++.+|++++++ ..+       ..++++|||+|+..++.+||...       
T Consensus        77 ~v~~a~~~~~~~~-~~~---~~~~~~~~~la~~l~~~~~-~~~-------~v~~~~gg~eA~~~al~~ar~~~-------  137 (453)
T 2cy8_A           77 RVNAAIAEALSHG-VQY---AASHPLEVRWAERIVAAFP-SIR-------KLRFTGSGTETTLLALRVARAFT-------  137 (453)
T ss_dssp             HHHHHHHHHHTTT-CSS---CSSCHHHHHHHHHHHHHCT-TCS-------EEEEESCHHHHHHHHHHHHHHHH-------
T ss_pred             HHHHHHHHHHHhC-CCC---CCCCHHHHHHHHHHHhhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh-------
Confidence            3445555555432 122   2356789999999999986 322       35899999999999999876432       


Q ss_pred             ccCCeEEEcCCCCch-hHHHHHHH----------hCCCC---CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEE
Q 010842          185 NMHKLVVYGSDQTHS-TFAKVCKL----------AGVSP---ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFL  250 (499)
Q Consensus       185 g~~~~~i~~s~~~H~-s~~ka~~~----------~G~g~---~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~v  250 (499)
                        ++..|++.+.+++ ....+...          .|+..   ..+..+|.       .|+++|+++|++..   ..+.+|
T Consensus       138 --~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~v  205 (453)
T 2cy8_A          138 --GRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFANHG---SDIAAF  205 (453)
T ss_dssp             --CCCEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHHHG---GGEEEE
T ss_pred             --CCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHhcC---CCEEEE
Confidence              2223444444433 22222111          12200   02333332       38999999997531   124466


Q ss_pred             EEecCCCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEE
Q 010842          251 CATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLW  326 (499)
Q Consensus       251 v~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~  326 (499)
                      +++...+++|.+-|    +++|.++|++||+++++|++|+++ ...+.......++ ..|.+++  .|+++.+..+|+++
T Consensus       206 i~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s~--sK~l~~G~~~G~v~  281 (453)
T 2cy8_A          206 IAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNHGMQALLDV-QPDLTCL--AKASAGGLPGGILG  281 (453)
T ss_dssp             EECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTTHHHHHHTC-CCSEEEE--EGGGGTTSSCEEEE
T ss_pred             EECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCchhhhHHhCC-CCcEEEE--ChhhhCCcceEEEe
Confidence            66655567898877    999999999999999999999865 3221111111232 2676654  59998767799998


Q ss_pred             EeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhc
Q 010842          327 VKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-LNLQSHIRSDIRLAKMFEGFVKS  405 (499)
Q Consensus       327 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~  405 (499)
                      .+++  +.+.+....    ...        .   ....+.....+...+++..+.. - .+++.++..++++++.+.|++
T Consensus       282 ~~~~--~~~~l~~~~----~~~--------~---~~~~t~~~n~~~~aa~~aal~~~~-~~~~~~~~~~~~~~l~~~L~~  343 (453)
T 2cy8_A          282 GRED--VMGVLSRGS----DRK--------V---LHQGTFTGNPITAAAAIAAIDTIL-EDDVCAKINDLGQFAREAMNH  343 (453)
T ss_dssp             ECHH--HHTTSSSCC------------------------CCCCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHHHHHH
T ss_pred             chHH--HHHHhcccc----CCC--------c---eeCCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHH
Confidence            8752  222222100    000        0   0000111223444444333321 1 234566777777888877765


Q ss_pred             C----CCeEEEcCCCceEEEEEecC-----CC----CCC-cchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccC
Q 010842          406 D----PRFEIVVPRHFALVCFRLNP-----YP----HSG-SADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGA  471 (499)
Q Consensus       406 ~----~~~~~~~~~~~~~v~f~~~~-----~~----~~~-~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~  471 (499)
                      +    +-...+ ++...++.+.+..     ..    ..+ .........++.+.|.++|..+ .+   .+.  +|++   
T Consensus       344 ~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v-~~---~~~--~~l~---  413 (453)
T 2cy8_A          344 LFARKGLNWLA-YGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDI-GG---RGS--VFLS---  413 (453)
T ss_dssp             HHHHTTCCEEE-ECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEEC-BT---TTE--EECC---
T ss_pred             HHhhCCCcEEE-EEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEE-eC---CCC--EEee---
Confidence            3    322222 3444567777653     10    000 0000123456788888888543 32   122  5543   


Q ss_pred             CCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842          472 SLTDERHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       472 ~~~t~~di~~l~~~l~~~~~~l~~~  496 (499)
                      ...+++||++++++|+++.+++.+.
T Consensus       414 ~~~t~~~i~~~l~~l~~~l~~~~~~  438 (453)
T 2cy8_A          414 AQHEREHVEHLVTTFDRVLDRLADE  438 (453)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            5689999999999999998877543

>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}

Probab=99.72  E-value=1.5e-16  Score=162.24  Aligned_cols=251  Identities=10%  Similarity=0.023  Sum_probs=165.4

Q ss_pred             HHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCC-CCchhHHHHHHH--
Q 010842          131 EIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSD-QTHSTFAKVCKL--  207 (499)
Q Consensus       131 E~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~-~~H~s~~ka~~~--  207 (499)
                      .+++.+++++++|.+...      .-++++|||+||..++.+..+           ++..|+++. ..|.++...+.+  
T Consensus        67 ~~~l~~~la~~~g~~~~~------~~i~~~sGt~Ai~~al~al~~-----------~Gd~Vl~~~~~~y~~~~~~~~l~g  129 (431)
T 3ht4_A           67 RDTLEKVYADVFGAEAGL------VRPQIISGTHAISTALFGILR-----------PGDELLYITGKPYDTLEEIVGVRG  129 (431)
T ss_dssp             HHHHHHHHHHHTTCSEEC------CBTTSCSHHHHHHHHHHTTCC-----------TTCEEEECSSSCCTTHHHHTTSSS
T ss_pred             HHHHHHHHHHHhCCCccc------ccceeeCHHHHHHHHHHHhCC-----------CCCEEEEeCCCCchhHHHHHhhcc
Confidence            455666799999987652      012255889999888765432           466777777 889888876643  


Q ss_pred             --------hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEec----CCCcccccCChhHHHHHHHH-
Q 010842          208 --------AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATV----GTTSTTAVDNVEPLAEVANE-  274 (499)
Q Consensus       208 --------~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~----gtt~~G~id~l~~I~~ia~~-  274 (499)
                              .|+   +++.+|.+++  +.+|+++|+++|+++      +.+|+++.    +++.+|.++|+++|+++|++ 
T Consensus       130 ~~~~~~~~~G~---~~~~v~~~~~--~~~d~e~l~~~l~~~------tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~  198 (431)
T 3ht4_A          130 KGVGSFKEYNI---GYNAVPLTEG--GLVDFEAVAAAIHSN------TKMIGIQRSKGYATRPSFTISQIKEMIAFVKEI  198 (431)
T ss_dssp             CSSSCSGGGTC---EEEECCBCTT--SSBCHHHHHHHCCTT------EEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHH
T ss_pred             cccchHHHcCC---EEEEeCCCCC--CCcCHHHHHhhcCCC------CeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhh
Confidence                    677   8999998764  599999999998653      34777776    77778888999999999999 


Q ss_pred             -hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccC---CCcceEEEEeCchhHHHhhcC--CccCCCCCC
Q 010842          275 -YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLS---YLDCCCLWVKQPGLLVKALST--DPEYLKNKP  348 (499)
Q Consensus       275 -~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~---p~~~g~l~~r~~~~l~~~~~~--~~~yl~~~~  348 (499)
                       +|++++||++|+.+.....   ....   .+|.++.+.||++++   |.| |+++.++ +.. +.+..  ....+..  
T Consensus       199 ~~~~~livDea~~~~~~~~~---~~~~---g~Di~~~S~sK~lgg~~~~~G-G~v~~~~-~li-~~l~~~~~~~~~g~--  267 (431)
T 3ht4_A          199 KPDVVVFVDNCYGEFIEEQE---PCHV---GADLMAGSLIKNPGGGIVKTG-GYIVGKE-QYV-EACAYRLTSPGIGA--  267 (431)
T ss_dssp             CTTCEEEEECTTCTTSSSCC---GGGT---TCSEEEEETTSGGGTTTCSSC-EEEEECH-HHH-HHHHHHHSCTTTTT--
T ss_pred             CCCCEEEEeCCChhhccCCC---cccc---CCeEEEcCccccCCCCCCCce-EEEEecH-HHH-HHHHHHhccCCccc--
Confidence             9999999999988753221   1111   389999999999765   444 7777654 322 22211  1111110  


Q ss_pred             CCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCce-----EEEEE
Q 010842          349 SESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA-----LVCFR  423 (499)
Q Consensus       349 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~-----~v~f~  423 (499)
                                    ..+-.+..  .|+.++  +...+..++++..++++++.+.|++. ++++... ...     ++.+.
T Consensus       268 --------------~~~~~~~~--~~~~~~--~l~~~~~~~~~~~~~a~~l~~~L~~~-g~~v~p~-~~~~~~~li~~i~  327 (431)
T 3ht4_A          268 --------------EAGASLYS--LQEMYQ--GFFLAPHVAGQALKGAIFTAAFLEKL-GMNTSPA-WNAPRTDLIQSVQ  327 (431)
T ss_dssp             --------------SCSCCCSC--SHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH-TCCEESC-TTSCCSSSCCEEE
T ss_pred             --------------ccCccHHH--HHHHHh--HhhhHHHHHHHHHHHHHHHHHHHHhC-cCEecCC-CCCCCccEEEEEE
Confidence                          01111111  122332  23455778888999999999999987 5666432 222     56666


Q ss_pred             ecCCCCCCcchhHHHHHHHHHHHHhc
Q 010842          424 LNPYPHSGSADTEMLNRKLLDWVNST  449 (499)
Q Consensus       424 ~~~~~~~~~~~~~~~~~~l~~~l~~~  449 (499)
                      +..         .+...++++.|.+.
T Consensus       328 l~~---------~~~~~~~~~~l~~~  344 (431)
T 3ht4_A          328 FDD---------KDRMIAFCQAIQYA  344 (431)
T ss_dssp             CCC---------HHHHHHHHHHHHHT
T ss_pred             eCC---------HHHHHHHHHHHHhc
Confidence            642         23345666666654

>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*

Probab=99.71  E-value=3.8e-16  Score=159.57  Aligned_cols=309  Identities=10%  Similarity=-0.010  Sum_probs=174.3

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~  206 (499)
                      ......++.++++++++ +.+       ..++++|||+|+..++..++...       + ++.+|......|.....+..
T Consensus        90 ~~~~~~~la~~l~~~~~-~~~-------~v~~~~ggsea~~~al~~a~~~~-------~-~~~vi~~~~~yhg~~~~~~~  153 (427)
T 3fq8_A           90 PCALENVLAEMVNDAVP-SIE-------MVRFVNSGTEACMAVLRIMRAYT-------G-RDKIIKFEGCYHGHADMFLV  153 (427)
T ss_dssp             CCHHHHHHHHHHHHHST-TCS-------EEEEESSHHHHHHHHHHHHHHHH-------C-CCEEEEEETCCCCSCGGGCS
T ss_pred             CCHHHHHHHHHHHHhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh-------C-CCEEEEECCCcCCCCHHHHH
Confidence            35566777888999987 322       35999999999999998877532       1 23344434444543322211


Q ss_pred             HhCCCC----------------CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hh
Q 010842          207 LAGVSP----------------ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VE  266 (499)
Q Consensus       207 ~~G~g~----------------~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~  266 (499)
                      ..|.+.                ..++.+|.+       |+++|++++++.   ...+.+|+++..++++|.+.|    ++
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------d~~~le~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~  223 (427)
T 3fq8_A          154 KAGSGVATLGLPSSPGVPKKTTANTLTTPYN-------DLEAVKALFAEN---PGEIAGVILEPIVGNSGFIVPDAGFLE  223 (427)
T ss_dssp             SCCTHHHHHTCCSCSSSCHHHHTTEEEEETT-------CHHHHHHHHHHS---TTTEEEEEECSSBCTTSCBCCCTTHHH
T ss_pred             hcCCcccccCCCCCCCCCCcccCceeecCCC-------CHHHHHHHHHhC---CCCEEEEEEcCCcCCCCCcCCCHHHHH
Confidence            111100                013333321       899999999762   223567777777788899988    99


Q ss_pred             HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCC
Q 010842          267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKN  346 (499)
Q Consensus       267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~  346 (499)
                      +|.++|++||+++++|++|+++ ...........++ ..|.++++  |.++.....|+++.++ + +.+.+.....+.. 
T Consensus       224 ~l~~l~~~~~~~li~DEv~~g~-~~g~~~~~~~~~~-~~di~t~s--K~~~~G~~~G~~~~~~-~-~~~~~~~~~~~~~-  296 (427)
T 3fq8_A          224 GLREITLEHDALLVFDEVITGF-RIAYGGVQEKFGV-TPDLTTLG--KIIGGGLPVGAYGGKR-E-IMQLVAPAGPMYQ-  296 (427)
T ss_dssp             HHHHHHHHTTCEEEEECTTTBT-TTBTTHHHHHTTC-CCSEEEEC--GGGGTTSSCEEEEECH-H-HHTTBTTTSSBCC-
T ss_pred             HHHHHHHHcCCEEEEecccccc-ccCcchhhHhcCC-CCChhhhh--hhhhCCcceEEEEEcH-H-HHHhhccCCCccc-
Confidence            9999999999999999999866 3221111112232 25777776  9998656688887644 2 2222221111110 


Q ss_pred             CCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEE
Q 010842          347 KPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCF  422 (499)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f  422 (499)
                                      ..+.....+.+.+++..+..-.-+++.++..++.+++++.|++    .+..... +....++.+
T Consensus       297 ----------------~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~  359 (427)
T 3fq8_A          297 ----------------AGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQETGHAACG-GQVSGMFGF  359 (427)
T ss_dssp             ----------------CCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCCEE-EEETTEEEE
T ss_pred             ----------------cCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCeEE-EEeeeEEEE
Confidence                            0111123444444444332100034455566666666666654    2211111 223345566


Q ss_pred             EecCCCCCC----cchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          423 RLNPYPHSG----SADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       423 ~~~~~~~~~----~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      .+......+    .........++.+.+.++|.++ .+..   ..  |+++ +..+|++||++++++|+++.++
T Consensus       360 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gi~v-~~~~---~~--r~~~-~~~~t~e~i~~~l~~l~~~l~~  426 (427)
T 3fq8_A          360 FFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGIYL-APSQ---FE--AGFT-SLAHTEEDIDATLAAARTVMSA  426 (427)
T ss_dssp             ESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTEEC-CSST---TS--CEEC-CTTCCHHHHHHHHHHHHHHHHH
T ss_pred             EEecCccccccccccccHHHHHHHHHHHHHCCcEE-ecCC---CC--CEEe-eCcCCHHHHHHHHHHHHHHHHh
Confidence            654321000    0001223467788888888543 3221   11  4444 3568999999999999998765

>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*

Probab=99.71  E-value=3.7e-15  Score=154.16  Aligned_cols=311  Identities=10%  Similarity=0.016  Sum_probs=177.8

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh--H---------------hhhhccCCe
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD--A---------------VGAENMHKL  189 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~--~---------------~~~~g~~~~  189 (499)
                      ..++++++.+.++++++...+       ..+|++|||+||..|+.+++.....  .               .+..|.++.
T Consensus       108 ~~~l~~~la~~l~~~~~~~~~-------~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~  180 (472)
T 1ohv_A          108 PENFVEKLRESLLSVAPKGMS-------QLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDY  180 (472)
T ss_dssp             BTTHHHHHHHTGGGGCCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCC
T ss_pred             HHHHHHHHHHHHHHhCCCCcC-------EEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCC
Confidence            456777776667776643222       3599999999999999999754210  0               000111123


Q ss_pred             EEEc-CCCCchhHHHHHHHhCC--------CCCCeEEeeCCCCCCC-------------ccCHHHHHHHHHHHHHcCCcc
Q 010842          190 VVYG-SDQTHSTFAKVCKLAGV--------SPANIRALPTSVDANF-------------SLSPQLLRRAVEADVEAGLVP  247 (499)
Q Consensus       190 ~i~~-s~~~H~s~~ka~~~~G~--------g~~~v~~v~~~~~~~~-------------~~d~~~L~~~i~~~~~~g~~p  247 (499)
                      .|++ ....|.+..-++.+.|.        ....+..+++... .+             ..|+++|+++|++....+..+
T Consensus       181 ~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~  259 (472)
T 1ohv_A          181 SILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRL-KYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTV  259 (472)
T ss_dssp             EEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCC-CSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred             eEEEECCCcccccHHHHhcCCCccccccCCCCCCCcccCCCcc-cCccccccccchhHHHHHHHHHHHHHHhcCCCCCCE
Confidence            4444 44556665555555442        1111122333210 01             236899999997643222235


Q ss_pred             EEEEEecCCCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCC-CCceeEecccccc-cCCCc
Q 010842          248 LFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE-RVDSFSFSPHKWL-LSYLD  321 (499)
Q Consensus       248 ~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-~aDsi~~~~hK~l-~~p~~  321 (499)
                      .+|++....+++|.+.|    +++|.++|++||++||+|++|.++......+.....++. ..|.++++  |++ +    
T Consensus       260 ~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~s--K~~l~----  333 (472)
T 1ohv_A          260 AGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFS--KKMMT----  333 (472)
T ss_dssp             EEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEEC--GGGSS----
T ss_pred             EEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEc--ccccc----
Confidence            57777766778998877    999999999999999999999864321110111112332 37888776  984 3    


Q ss_pred             ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHH
Q 010842          322 CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKM  398 (499)
Q Consensus       322 ~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~  398 (499)
                      .|++. +. . +.   ...+...                  ..+-....+...   +++..+..   +++.++..+++++
T Consensus       334 GG~~~-~~-~-~~---~~~~~~~------------------~~T~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~  386 (472)
T 1ohv_A          334 GGFFH-KE-E-FR---PNAPYRI------------------FNTWLGDPSKNLLLAEVINIIKR---EDLLSNAAHAGKV  386 (472)
T ss_dssp             EEEEE-CG-G-GS---CSSSSSS------------------CCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHH
T ss_pred             CCccC-ch-h-hc---ccccccc------------------cCccCccHHHHHHHHHHHHHHHh---CCHHHHHHHHHHH
Confidence            25554 32 1 10   0000000                  011111233333   34443322   2356677777888


Q ss_pred             HHHHHhcC----CC-eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCC
Q 010842          399 FEGFVKSD----PR-FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASL  473 (499)
Q Consensus       399 l~~~L~~~----~~-~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~  473 (499)
                      +.+.|+++    |+ +.-+ .+...++.|.+..         ......+.++|.++|..+. +.   +..++|+++. ..
T Consensus       387 l~~~L~~l~~~~~~~v~~~-~~~g~~~~~~~~~---------~~~~~~~~~~l~~~Gv~~~-~~---g~~~iRi~~~-~~  451 (472)
T 1ohv_A          387 LLTGLLDLQARYPQFISRV-RGRGTFCSFDTPD---------ESIRNKLISIARNKGVMLG-GC---GDKSIRFRPT-LV  451 (472)
T ss_dssp             HHHHHHHHHHHCTTTCEEE-EEETTEEEEECSS---------HHHHHHHHHHHHHTTEECE-EE---TTTEEEECCC-TT
T ss_pred             HHHHHHHHHhhCCCcEEee-cCCceEEEEEeCC---------hhHHHHHHHHHHHCCeEEe-cC---CCCEEEEECC-CC
Confidence            88777653    43 4322 2334455665432         2235678888888885433 21   3457999984 78


Q ss_pred             CcHHHHHHHHHHHHHHHHHH
Q 010842          474 TDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       474 ~t~~di~~l~~~l~~~~~~l  493 (499)
                      +|++||++++++|.++.+++
T Consensus       452 ~t~e~i~~~~~~l~~~l~~~  471 (472)
T 1ohv_A          452 FRDHHAHLFLNIFSDILADF  471 (472)
T ss_dssp             CCHHHHHHHHHHHHHHHHTC
T ss_pred             CCHHHHHHHHHHHHHHHHhc
Confidence            99999999999999887653

>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*

Probab=99.71  E-value=2.5e-15  Score=153.87  Aligned_cols=311  Identities=12%  Similarity=0.039  Sum_probs=175.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      .....++.++++++++ ..+       ..++++|||+|+..++.++|... +       ++.+|+.....|.....+...
T Consensus        95 ~~~~~~l~~~la~~~~-~~~-------~v~~~~sgseA~~~al~~ar~~~-~-------~~~vi~~~~~yhg~~~~~~~~  158 (434)
T 2epj_A           95 GEAEVLLAEKILGYVK-RGG-------MIRFVNSGTEATMTAIRLARGYT-G-------RDLILKFDGCYHGSHDAVLVA  158 (434)
T ss_dssp             CHHHHHHHHHHHHHHC-TTC-------EEEEESSHHHHHHHHHHHHHHHH-C-------CCEEEEEETCCCCSSGGGSEE
T ss_pred             CHHHHHHHHHHHHhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh-C-------CCeEEEEcCCcCCCCHHHHHh
Confidence            4455667777888884 222       35999999999999999886432 1       233444343344322211111


Q ss_pred             -------------hCCC---CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhH
Q 010842          208 -------------AGVS---PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEP  267 (499)
Q Consensus       208 -------------~G~g---~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~  267 (499)
                                   .|+.   ...++.+|.       .|+++|+++|++..   ..+.+|+++..++++|.+.|    +++
T Consensus       159 ~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~  228 (434)
T 2epj_A          159 AGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERVFAEYG---DRIAGVIVEPVIANAGVIPPRREFLAA  228 (434)
T ss_dssp             CC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHHHHHHG---GGEEEEEECSSBCSSSCBCCCHHHHHH
T ss_pred             cCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHHHHhCC---CCEEEEEEeCCcCCCCccCCCHHHHHH
Confidence                         1220   013555553       38999999997531   13456666666667899888    999


Q ss_pred             HHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCC
Q 010842          268 LAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNK  347 (499)
Q Consensus       268 I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~  347 (499)
                      |.++|++||+++++|++|+++ ...+.......++ ..|.+++  +|+++.....|+++.+++  +.+.+.......   
T Consensus       229 l~~l~~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s~--sK~l~~G~~~G~v~~~~~--~~~~l~~~~~~~---  299 (434)
T 2epj_A          229 LQRLSRESGALLILDEVVTGF-RLGLEGAQGYFNI-EGDIIVL--GKIIGGGFPVGAVAGSRE--VMSLLTPQGKVF---  299 (434)
T ss_dssp             HHHHHHHHTCEEEEEETTTTT-TSSTTHHHHHHTC-CCSEEEE--EGGGGTTSSCEEEEECHH--HHTTBTTTSSBC---
T ss_pred             HHHHHHHcCCEEEEEcchhce-eCCcchhhHHhCC-CCCeeee--cchhcCCcceeeeeecHH--HHHhhccCCCcc---
Confidence            999999999999999999865 3221111111233 3677655  599987667899888752  222222100000   


Q ss_pred             CCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEEcCCCceEEEEEe
Q 010842          348 PSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP---RFEIVVPRHFALVCFRL  424 (499)
Q Consensus       348 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~~~v~f~~  424 (499)
                                    ...+-....+.+.+++..+..-.-+++.++..++++++.+.|+++.   ++....++..+++.+.+
T Consensus       300 --------------~~~t~~~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~  365 (434)
T 2epj_A          300 --------------NAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALEEAASEVLDRTGLPYTINRVESMMQLFI  365 (434)
T ss_dssp             --------------CCCTTTTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEETTEEEEEE
T ss_pred             --------------cCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEE
Confidence                          0011112334443333333110013456777778888888877641   23211123445667766


Q ss_pred             cCCCCCC--c--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          425 NPYPHSG--S--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       425 ~~~~~~~--~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      .......  +  ........++.+.|.++|+. +.+..   ...+|++   ..+|++|+++++++|+++.+++.
T Consensus       366 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~-v~~~~---~~~~~~~---~~~t~e~i~~~l~~l~~~l~~~~  432 (434)
T 2epj_A          366 GVEEVSNAAQARKADKKFYVKLHEEMLRRGVF-IAPSN---LEAVFTG---LPHQGEALEIAVEGLRSSLKTVL  432 (434)
T ss_dssp             TCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEE-CCSST---TSCEECC---TTCSHHHHHHHHHHHHHHHHHHH
T ss_pred             eCCCcccchhccccCHHHHHHHHHHHHHCCeE-EeccC---CCcEEEe---ccCCHHHHHHHHHHHHHHHHHHh
Confidence            4310000  0  00012356788888888843 33321   1234543   45799999999999999987763

>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}

Probab=99.71  E-value=3.7e-15  Score=152.33  Aligned_cols=307  Identities=8%  Similarity=0.005  Sum_probs=165.1

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      ....++.++++++++-++        ..++++|||+|+..|+..++...       + ++.+|......|.....++...
T Consensus        93 ~~~~~la~~l~~~~~~~~--------~v~~~~sGsea~~~al~~a~~~~-------~-~~~ii~~~~~yhg~~~~~~~~~  156 (429)
T 4e77_A           93 EMEVKMAQLVTDLVPTMD--------MVRMVNSGTEATMSAIRLARGYT-------G-RDKIIKFEGCYHGHADCLLVKA  156 (429)
T ss_dssp             HHHHHHHHHHHHHSTTCS--------EEEEESSHHHHHHHHHHHHHHHH-------C-CCEEEEETTCCCC---------
T ss_pred             HHHHHHHHHHHhhCCCCC--------EEEEeCcHHHHHHHHHHHHHHhh-------C-CCEEEEEcCccCCCChhhhhhc
Confidence            455556677888886222        35999999999999999887532       1 2334444445565554333222


Q ss_pred             CCCCC----------------CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHH
Q 010842          209 GVSPA----------------NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPL  268 (499)
Q Consensus       209 G~g~~----------------~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I  268 (499)
                      |.|..                .+..+|.       -|+++|++++++.   +..+.+|++...+++.|.+.|    +++|
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~---~~~~~~vi~ep~~~~~g~~~~~~~~l~~l  226 (429)
T 4e77_A          157 GSGALTLGQPNSPGVPTDFAKHTLTCTY-------NDLASVRQAFEQY---PQEVACIIVEPVAGNMNCIPPLPEFLPGL  226 (429)
T ss_dssp             ---------CCCTTSCGGGGTTEEEECT-------TCHHHHHHHHHHS---TTTEEEEEECSSBCTTSCBCCCTTHHHHH
T ss_pred             CCcccccCCCCcCCCCCccCCceeecCC-------CCHHHHHHHHHhc---CCCEEEEEECCccCCCCCcCCCHHHHHHH
Confidence            22110                1111211       2899999998752   123445666555566788877    9999


Q ss_pred             HHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCC
Q 010842          269 AEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKP  348 (499)
Q Consensus       269 ~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~  348 (499)
                      .++|++||++||+|++|+++ ...........++ ..|.++++  |.++.+...|+++.+++  +.+.+.......    
T Consensus       227 ~~l~~~~~~lli~DEv~~g~-r~g~~~~~~~~~~-~pdi~t~s--K~~~~G~~~G~~~~~~~--~~~~l~~~~~~~----  296 (429)
T 4e77_A          227 RALCDEFGALLIIDEVMTGF-RVALAGAQDYYHV-IPDLTCLG--KIIGGGMPVGAFGGRRE--VMNALAPTGPVY----  296 (429)
T ss_dssp             HHHHHHHTCEEEEEETTTBT-TTBTTCHHHHTTC-CCSEEEEE--GGGGTTSCCEEEEECHH--HHTTBTTTSSBC----
T ss_pred             HHHHHHcCCEEEEeccccCc-ccCcchHHHhcCC-CCCeeeec--ccccCCCCeEEEEECHH--HHHHhccCCCcc----
Confidence            99999999999999999876 3221111112232 25776664  99887677888776542  222222110000    


Q ss_pred             CCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEEcCCCceEEEEEe
Q 010842          349 SESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRFEIVVPRHFALVCFRL  424 (499)
Q Consensus       349 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~~~~~~~~~~~v~f~~  424 (499)
                                   ...+.....+.+.+++..+..-.-+++.++..++.+++++.|++    .+... ..+....++.+.+
T Consensus       297 -------------~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~g~~~~~~~  362 (429)
T 4e77_A          297 -------------QAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEENIPL-VVNHVGGMFGLFF  362 (429)
T ss_dssp             -------------C--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTCCC-EEEEETTEEEEEC
T ss_pred             -------------ccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCce-EEEEeeeEEEEEE
Confidence                         00111223344444444332100134455566666666666654    33211 1123345566665


Q ss_pred             cCCCCCCc-----chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          425 NPYPHSGS-----ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       425 ~~~~~~~~-----~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      ........     ........++.+.|.++|.++ .+.   +...+|++   ..+|++|+++++++|+++.++
T Consensus       363 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v-~~~---~~~~~~~~---~~~t~e~i~~~l~~l~~~l~~  428 (429)
T 4e77_A          363 TNADTVTCYQDVMNCDVERFKRFFHLMLEEGVYL-APS---AFEAGFMS---LAHSNEDIQKTVNAARRCFAK  428 (429)
T ss_dssp             CSSSCCCSHHHHHTSCHHHHHHHHHHHHHTTEEC-CSS---TTSCEECC---TTCCHHHHHHHHHHHHHHHTT
T ss_pred             ccCcccccccccccccHHHHHHHHHHHHHCCeEE-eec---CCCCEEEe---ccCCHHHHHHHHHHHHHHHHh
Confidence            43210000     000123467888888888543 322   11234543   557999999999999987653

>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0

Probab=99.69  E-value=8.8e-16  Score=155.35  Aligned_cols=323  Identities=10%  Similarity=-0.004  Sum_probs=200.9

Q ss_pred             hHHHHHHHHHHHc-c-cCCcccccChhhHHHHHHHHHHHHHHcCCC--CccccCCCccEEEcCChHHHHHHHHHHHHHHH
Q 010842          102 TAGFLGEMLCACF-N-SVGFNWLASPASTELEIVVMDWLATMLKLP--KTFMFSGTGGGVIQNTTSDSILVTLIAARDRA  177 (499)
Q Consensus       102 ~~~~~~~~l~~~~-n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~--~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~  177 (499)
                      ++..+.+... .. + .....|....+..++.+++.+|+.+..+.+  ++.     -..++|.||++|+..++.+..+. 
T Consensus        48 ~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-----i~i~~t~G~~~al~~~~~~l~~~-  120 (405)
T 3k7y_A           48 IFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKK-----ICTIQCIGGTGAIFVLLEFLKML-  120 (405)
T ss_dssp             CCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTC-----EEEEEEEHHHHHHHHHHHHHHTT-
T ss_pred             ccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHHHHHHHcCCCCccccccc-----eEEEEcCchHHHHHHHHHHHHhc-
Confidence            3455555544 32 2 234568778889999999999986554432  110     02478999999988877765431 


Q ss_pred             HhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecC-C
Q 010842          178 LDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVG-T  256 (499)
Q Consensus       178 ~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~g-t  256 (499)
                              .+ ..|+++.+++..+..+++..|.   +++.||+.++++|.+|+++|++++++..    ...+|+++.+ +
T Consensus       121 --------~~-d~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~----~~~~i~l~~~~~  184 (405)
T 3k7y_A          121 --------NV-ETLYVTNPPYINHVNMIESRGF---NLKYINFFDYNLIDINYDLFLNDLRNIP----NGSSVILQISCY  184 (405)
T ss_dssp             --------TC-CEEEEESSCCHHHHHHHHTTTC---EEEEECCEETTTTEECHHHHHHHHHHSC----SSCEEEECCSSC
T ss_pred             --------CC-CEEEEeCCCCHhHHHHHHHcCC---eEEEEeccccccCCcCHHHHHHHHHhCC----CCeEEEEeCCCC
Confidence                    14 6799999999999999999999   9999998433358999999999997521    1225666654 7


Q ss_pred             Cccccc---CChhHHHHHHHHhCCEEEeeccccchhccC-c-c---chhhhcCCCCCceeEecccccccC-CCcceEEEE
Q 010842          257 TSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACIC-P-E---FRHYLNGIERVDSFSFSPHKWLLS-YLDCCCLWV  327 (499)
Q Consensus       257 t~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~-~-~---~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~  327 (499)
                      ||||.+   +.+++|+++|++|++|+++|.+|..+.... + .   .+... ....--.++.++.|.++. ..-+|++++
T Consensus       185 NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~l~GlRiG~~~~  263 (405)
T 3k7y_A          185 NPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFE-EKNIAFSVCQSFSKNMSLYGERAGALHI  263 (405)
T ss_dssp             TTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHH-TTTCCEEEEEECTTTSCCTTTTEEEEEE
T ss_pred             CCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHH-hcCCcEEEEeeCCccCCCccccceEEEE
Confidence            999999   457788899999999999999998764321 0 0   11111 111112456788999985 467888764


Q ss_pred             --eCchhHHHh---hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--------HHHHHHHHHHHHH
Q 010842          328 --KQPGLLVKA---LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--------VLNLQSHIRSDIR  394 (499)
Q Consensus       328 --r~~~~l~~~---~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~  394 (499)
                        .+++...+.   +..........                    ...+...++...+.        .+.++++.++..+
T Consensus       264 ~~~~~~~~~~~~~~l~~~~~~~~~~--------------------~~~~~q~~~~~~l~~~~l~~~~~~~l~~~~~~~~~  323 (405)
T 3k7y_A          264 VCKNQEEKKIVFNNLCFIVRKFYSS--------------------PVIHTNRILCQLLNNQNLKLNWIKELSQLSQRITN  323 (405)
T ss_dssp             ECSSHHHHHHHHHHHHHHHHTTTSS--------------------CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHHHHHHhcccCC--------------------CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence              444322111   11000000000                    01233333322221        1234555566778


Q ss_pred             HHHHHHHHHh----cCC---CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEE
Q 010842          395 LAKMFEGFVK----SDP---RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRF  467 (499)
Q Consensus       395 ~a~~l~~~L~----~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi  467 (499)
                      .++++.+.|+    +..   +|++. +|+.+.+.|.-.+             .+++++|.+.| +++.+.   +    |+
T Consensus       324 ~R~~l~~~L~~~~~~~g~~~~~~~~-~p~gg~f~~~~l~-------------~~~~~~L~~~g-V~v~p~---~----Ri  381 (405)
T 3k7y_A          324 NRILFFNKLETYQKKYNLNYDWNVY-KKQRGLFSFVPLL-------------AKIAEHLKTHH-IYIINN---G----RI  381 (405)
T ss_dssp             HHHHHHHHHHHHGGGGTCCCCGGGG-SSCCSSEEECGGG-------------GGGTTTTTTTT-EECCTT---S----EE
T ss_pred             HHHHHHHHHHhhhhhcCCCCCCccc-cCCceEEEecCCC-------------HHHHHHHHHCC-EeecCC---C----eE
Confidence            8889999998    652   14544 4555555442111             12345564445 444442   2    99


Q ss_pred             eccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          468 AVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       468 ~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      +++  ..++++|++++++|.++.++
T Consensus       382 s~a--~~~~~~i~~~~~~i~~~~~~  404 (405)
T 3k7y_A          382 NVS--GITKNNVDYIADKICLSLSQ  404 (405)
T ss_dssp             EGG--GCCTTHHHHHHHHHHHHHHC
T ss_pred             EEe--ccCHHHHHHHHHHHHHHHhh
Confidence            985  35778999999999998764

>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*

Probab=99.68  E-value=5.3e-16  Score=162.98  Aligned_cols=347  Identities=12%  Similarity=0.034  Sum_probs=195.3

Q ss_pred             ccccChhhHHHHHH-HHHHHHHHcCC---CCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCC
Q 010842          120 NWLASPASTELEIV-VMDWLATMLKL---PKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSD  195 (499)
Q Consensus       120 ~~~~~p~~~~lE~~-~~~~la~l~g~---~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~  195 (499)
                      .|...++...+.++ +..|+.+.++.   +...     ...++|+|+++|+..++.+...+..      ..++..|+++.
T Consensus       133 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~-----~~I~~t~G~~eal~~~~~~l~~~~l------~~~Gd~Vlv~~  201 (546)
T 2zy4_A          133 NYPVPPRMLNISEKIVRQYIIREMGADAIPSES-----VNLFAVEGGTAAMAYIFESLKLNGL------LKAGDKVAIGM  201 (546)
T ss_dssp             SCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGG-----EEEEEEEHHHHHHHHHHHHHHHTTS------SCTTCEEEEEE
T ss_pred             CCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCc-----ceEEEECCHHHHHHHHHHHhhhhhc------CCCCCEEEEeC
Confidence            45555455555555 44566666543   1110     1468899999998877765321100      01466788899


Q ss_pred             CCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHH
Q 010842          196 QTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVA  272 (499)
Q Consensus       196 ~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia  272 (499)
                      ++|..+..++.+.+.|. +++.+|++++++|.+|+++|++.+..      .+.+|+++.++||||.+-+   +++|+++|
T Consensus       202 P~y~~~~~~~~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~~~~------~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a  274 (546)
T 2zy4_A          202 PVFTPYIEIPELAQYAL-EEVAINADPSLNWQYPDSELDKLKDP------AIKIFFCVNPSNPPSVKMDQRSLERVRNIV  274 (546)
T ss_dssp             SCCHHHHHHHHSTTSCC-EEEEEECBGGGTTBCCHHHHGGGGST------TEEEEEEESSCSSSCBCCCHHHHHHHHHHH
T ss_pred             CCCccHHHHHHHcCCCc-EEEEEecCcccCCCCCHHHHHHhhCC------CCeEEEEECCCCCCCccCCHHHHHHHHHHH
Confidence            99999998877665432 78889988766689999999887632      2447777899999999965   66778888


Q ss_pred             --HHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCc--------
Q 010842          273 --NEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDP--------  341 (499)
Q Consensus       273 --~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~--------  341 (499)
                        +++|+++++|++|+.+..........   ....+.++.+.+|+++.| .-+|+++..+...........+        
T Consensus       275 ~~~~~~~~ii~De~y~~~~~~~~s~~~~---~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~~p~~~~~~l~  351 (546)
T 2zy4_A          275 AEHRPDLMILTDDVYGTFADDFQSLFAI---CPENTLLVYSFSKYFGATGWRLGVVAAHQQNVFDLALDKLQESEKVALD  351 (546)
T ss_dssp             HHTCTTCEEEEECTTGGGSTTCCCHHHH---CGGGEEEEEESTTTTTCGGGCEEEEEEESSCHHHHHHHTSCHHHHHHHH
T ss_pred             HhccCCcEEEEeCcchhhcccCcCHHHh---CCCCEEEEEeCccccCCCCcceEEEEECCHHHHHHHHhhcchhhhHHHH
Confidence              78999999999998764311111111   112467788999999755 4589998877532222111100        


Q ss_pred             -cCCCCCCCCCCCcccC--------CCcccCCCCCCCcHHHHH----HH-HHh--cHHHHHHHHHHHHHHHHHHHHHHhc
Q 010842          342 -EYLKNKPSESNSVVDF--------KDWQVGTGRRFKSLRLWM----VL-RSY--GVLNLQSHIRSDIRLAKMFEGFVKS  405 (499)
Q Consensus       342 -~yl~~~~~~~~~~~~~--------~~~~~~~sr~~~al~~~~----~l-~~~--g~~g~~~~~~~~~~~a~~l~~~L~~  405 (499)
                       .|-......  ....+        .......+.........+    ++ ..+  +....++..+...++.+.+.+.|. 
T Consensus       352 ~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~~~~~~~~~r~~~~~r~~~l~~~L~-  428 (546)
T 2zy4_A          352 HRYRSLLPDV--RSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDEADEYKHTLKQLIRRRETTLYRELG-  428 (546)
T ss_dssp             HHHTTTCSCG--GGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHGGGT-
T ss_pred             HHhhhccccc--cchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcC-
Confidence             000000000  00000        000000000111111111    11 222  233455555666667777777775 


Q ss_pred             CCCeEEEcCCCceEE-EEEecCCC--CCCcchh-----H-HHHHHHHHHHHhcCCEEEEeeeEC-CEEEEEEeccCCCCc
Q 010842          406 DPRFEIVVPRHFALV-CFRLNPYP--HSGSADT-----E-MLNRKLLDWVNSTGRVYLTHTIVG-GLYMLRFAVGASLTD  475 (499)
Q Consensus       406 ~~~~~~~~~~~~~~v-~f~~~~~~--~~~~~~~-----~-~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lRi~~~~~~~t  475 (499)
                      . ++.. .++..+.+ .+++....  .....-.     + .....+.+.+.+.|+++..+..+. +..++|+++.  ..+
T Consensus       429 ~-~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~--~~~  504 (546)
T 2zy4_A          429 M-PPLR-DENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLA--NLN  504 (546)
T ss_dssp             S-SCCC-CTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESS--SSC
T ss_pred             C-Cccc-CCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEec--cCC
Confidence            3 2332 24444443 44442100  0000000     0 012335566677787666554443 3467999995  357


Q ss_pred             HHHHHHHHHHHHHHHHHHh
Q 010842          476 ERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       476 ~~di~~l~~~l~~~~~~l~  494 (499)
                      ++++++++++|+++.+++.
T Consensus       505 ~e~i~~~~~~l~~~l~~~~  523 (546)
T 2zy4_A          505 EYEYAAIGRALRKMADELY  523 (546)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHH
Confidence            8999999999999887654

>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*

Probab=99.68  E-value=2.6e-15  Score=151.61  Aligned_cols=294  Identities=11%  Similarity=-0.035  Sum_probs=184.8

Q ss_pred             cccccChhh-----HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCe----
Q 010842          119 FNWLASPAS-----TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKL----  189 (499)
Q Consensus       119 ~~~~~~p~~-----~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~----  189 (499)
                      ..|....+.     .++++++.+|+. ..|.+...    ....++|+|+++|+..++.+..+           ++.    
T Consensus        57 ~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~----~~~i~~t~G~~~al~~~~~~l~~-----------~Gd~~~~  120 (391)
T 3bwn_A           57 SYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATE----DRYIVVGTGSTQLCQAAVHALSS-----------LARSQPV  120 (391)
T ss_dssp             SSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCS----SSEEEEEEHHHHHHHHHHHHHHH-----------TSSSSSE
T ss_pred             hcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCC----CCeEEEeCChHHHHHHHHHHhcC-----------CCCCCcc
Confidence            456555665     889999888876 44653110    01468999999998888776643           445    


Q ss_pred             EEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHH
Q 010842          190 VVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLA  269 (499)
Q Consensus       190 ~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~  269 (499)
                      .|+++.++|.++..+++..|.   +++.+++|.++   ++        .      ..+.+|+.+.++||||.+-+  +|+
T Consensus       121 ~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~d~~~---l~--------~------~~~k~v~l~~p~NPtG~~~~--~l~  178 (391)
T 3bwn_A          121 SVVAAAPFYSTYVEETTYVRS---GMYKWEGDAWG---FD--------K------KGPYIELVTSPNNPDGTIRE--TVV  178 (391)
T ss_dssp             EEEECSSCCTHHHHHHHTTCB---TTEEEEEESTT---CC--------C------CSCEEEEEESSCTTTCCCCC--CCC
T ss_pred             eEEEcCCCchhHHHHHHHcCC---eEEEecCCHHH---cC--------C------CCCEEEEECCCCCCCchhHH--HHH
Confidence            789999999999999999999   99999987643   32        0      12457778999999999975  554


Q ss_pred             HHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCC
Q 010842          270 EVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKP  348 (499)
Q Consensus       270 ~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~  348 (499)
                      +.++.+++++++|++|+..     .... +......+.+..+++|.++.| ..+|++++.++... +.+.....+...  
T Consensus       179 ~~~~~~~~~ii~De~y~~~-----~~~~-l~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~l~-~~l~~~~~~~~~--  249 (391)
T 3bwn_A          179 NRPDDDEAKVIHDFAYYWP-----HYTP-ITRRQDHDIMLFTFSKITGHAGSRIGWALVKDKEVA-KKMVEYIIVNSI--  249 (391)
T ss_dssp             -----CCCEEEEECTTCST-----TTSC-CCCCBCCSEEEEEHHHHHSCGGGCEEEEEECCHHHH-HHHHHHHHHHHS--
T ss_pred             HHhhcCCCEEEEeCCCCCC-----CCCc-cccCCCCeEEEEechhhcCCCccceEEEEecCHHHH-HHHHHHhccccc--
Confidence            4222233999999999731     1111 111223678889999998755 34688887554433 222111111000  


Q ss_pred             CCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc------------HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC
Q 010842          349 SESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG------------VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH  416 (499)
Q Consensus       349 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g------------~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~  416 (499)
                                        ....+..+++...+.            .+.++++.++..++++++.+.|++.|++++..+..
T Consensus       250 ------------------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p~~  311 (391)
T 3bwn_A          250 ------------------GVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAFTLPKYPE  311 (391)
T ss_dssp             ------------------SCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSEECCCCCC
T ss_pred             ------------------CCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccCCc
Confidence                              012233333333331            24577788888899999999999988877653211


Q ss_pred             c-------------eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-CEEEEEEeccCCCCcHHHHHHH
Q 010842          417 F-------------ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-GLYMLRFAVGASLTDERHVVAA  482 (499)
Q Consensus       417 ~-------------~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lRi~~~~~~~t~~di~~l  482 (499)
                      .             ..+++.+...            +.+.+.+.+.|+.+..+..+. +..++|++++   +++++++++
T Consensus       312 ~~~~f~~~~~~~~g~~~~~~~~~~------------~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~---~~~e~i~~~  376 (391)
T 3bwn_A          312 AFCNYFGKSLESYPAFAWLGTKEE------------TDLVSELRRHKVMSRAGERCGSDKKHVRVSML---SREDVFNVF  376 (391)
T ss_dssp             EEETTTTEEECCCCSEEEEEESSS------------CCHHHHHHHTTEECEEGGGGTCCTTEEEEESC---SCHHHHHHH
T ss_pred             cccccccccCCCcceEEEecCCcH------------HHHHHHHHHCCEEEccCCCCCCCCCEEEEEec---CCHHHHHHH
Confidence            1             1344555321            123445556786555544443 2468999996   488999999


Q ss_pred             HHHHHHHHHH
Q 010842          483 WELIMEGADR  492 (499)
Q Consensus       483 ~~~l~~~~~~  492 (499)
                      +++|+++.++
T Consensus       377 ~~~L~~~~~~  386 (391)
T 3bwn_A          377 LERLANMKLI  386 (391)
T ss_dssp             HHHHHSCC--
T ss_pred             HHHHHHHHHh
Confidence            9999876543

>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}

Probab=99.62  E-value=8.1e-14  Score=142.11  Aligned_cols=305  Identities=13%  Similarity=0.038  Sum_probs=170.8

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      ..++.++.++++++++ ..+       ..++++|||+|+..++.+||...       + ++.+|+.....|.....+...
T Consensus        91 ~~~~~~l~~~l~~~~~-~~~-------~v~~~~~g~ea~~~al~~ar~~~-------~-~~~vi~~~~~yhg~~~~~~~~  154 (424)
T 2e7u_A           91 SPLEVALAKKVKRAYP-FVD-------LVRFVNSGTEATMSALRLARGYT-------G-RPYIVKFRGNYHGHADGLLVE  154 (424)
T ss_dssp             CHHHHHHHHHHHHHCT-TCC-------EEEEESSHHHHHHHHHHHHHHHH-------C-CCEEEEETTCCCCCCGGGSEE
T ss_pred             CHHHHHHHHHHHHhCC-CCC-------EEEEeCCHHHHHHHHHHHHHHhh-------C-CCEEEEECCCcCCCcHHHHHh
Confidence            4566677777888885 222       35899999999999999876432       1 233444443445432222211


Q ss_pred             hCC-----------CC-----CCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhH
Q 010842          208 AGV-----------SP-----ANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEP  267 (499)
Q Consensus       208 ~G~-----------g~-----~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~  267 (499)
                      .|.           |.     ..++.+|.       .|+++|++++++..   ..+.+|+++..++++|.+-|    +++
T Consensus       155 ~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~  224 (424)
T 2e7u_A          155 AGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREVLKRRG---EEIAAIIFEPVVGNAGVLVPTEDFLKA  224 (424)
T ss_dssp             CCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHHHHHHG---GGEEEEEECSSBCTTSCBCCCHHHHHH
T ss_pred             cCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHHHHhCC---CCEEEEEEeCCCCCCCCcCCCHHHHHH
Confidence            111           10     13444442       38999999997531   12445555554455898877    999


Q ss_pred             HHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCC
Q 010842          268 LAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNK  347 (499)
Q Consensus       268 I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~  347 (499)
                      |.++ ++||+++++|++|+++ ...+.......++ ..|.++  ..|+++.+..+|+++.+++  +.+.+.......   
T Consensus       225 l~~l-~~~g~~lI~DEv~~g~-~~g~~~~~~~~~~-~~di~s--~sK~l~~G~~~G~~~~~~~--~~~~~~~~~~~~---  294 (424)
T 2e7u_A          225 LHEA-KAYGVLLIADEVMTGF-RLAFGGATELLGL-KPDLVT--LGKILGGGLPAAAYAGRRE--IMEKVAPLGPVY---  294 (424)
T ss_dssp             HHHG-GGGTCEEEEECTTTTT-TSSTTHHHHHHTC-CCSEEE--ECGGGGTTSSCEEEEECHH--HHTTBTTTSSBC---
T ss_pred             HHHH-HHcCCEEEEecCcccc-ccchhHHHHHhCC-Ccchhh--hhhhhhCCcceEEEEEcHH--HHhhhcccCCcc---
Confidence            9999 9999999999999875 3221111112233 267664  4699987677899888652  222222100000   


Q ss_pred             CCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEcCCCceEEEEE
Q 010842          348 PSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGV-LNLQSHIRSDIRLAKMFEGFVKSD---PRFEIVVPRHFALVCFR  423 (499)
Q Consensus       348 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v~f~  423 (499)
                                    ...+-....+.+.+++..+.. +..+++.++..++.+++.+.|+++   .++....++..+++.+.
T Consensus       295 --------------~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~  360 (424)
T 2e7u_A          295 --------------QAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLKEVLKEKGLPHTVNRVGSMITVF  360 (424)
T ss_dssp             --------------CCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTEEEEE
T ss_pred             --------------cCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeeceEEEEE
Confidence                          001112233444444433311 112456777778888888888764   12311112344566666


Q ss_pred             ecCCCCCC--c--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          424 LNPYPHSG--S--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       424 ~~~~~~~~--~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      +.......  +  ........++.+.|.++|.. +.+..   ...+|++   ...|++++++++++|+++
T Consensus       361 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~-v~~~~---~~~~~~~---~~~t~~~i~~~l~~l~~~  423 (424)
T 2e7u_A          361 FTEGPVVTFQDARRTDTELFKRFFHGLLDRGIY-WPPSN---FEAAFLS---VAHREEDVEKTLEALRKA  423 (424)
T ss_dssp             SSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEE-CCSSS---SSCEECC---TTCCHHHHHHHHHHHHHH
T ss_pred             EeCCCCcchhhhcccCHHHHHHHHHHHHHCCeE-EeccC---CCceEee---ccCCHHHHHHHHHHHHHh
Confidence            64310000  0  00022356788888888844 33322   1225543   457999999999999875

>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}

Probab=99.60  E-value=1.8e-13  Score=135.60  Aligned_cols=317  Identities=13%  Similarity=0.059  Sum_probs=191.7

Q ss_pred             cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC---C
Q 010842          121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ---T  197 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~---~  197 (499)
                      |.......++|.-+++..+++||.+...|    +--+=..||+.||+.+..+..+           |++.|+.-+.   .
T Consensus        92 YgGce~vD~iE~la~~rak~lF~a~~A~w----~VNVQP~SGs~AN~avy~All~-----------PGD~ilg~~l~~GG  156 (490)
T 3ou5_A           92 YGGAEVVDEIELLCQRRALEAFDLDPAQW----GVNVQPYSGSPANLAVYTALLQ-----------PHDRIMGLDLPDGG  156 (490)
T ss_dssp             ----CHHHHHHHHHHHHHHHHTTCCTTTE----EEECCCSSHHHHHHHHHHHHCC------------CCCEECBC-----
T ss_pred             cCCChHHHHHHHHHHHHHHHHhCCCcccc----CCCCCcCCHHHHHHHHHHHHcC-----------CCCEEEecccCCCC
Confidence            34455678999999999999999987521    0025566999999988877643           5666765443   3


Q ss_pred             chhHHH-----HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHH
Q 010842          198 HSTFAK-----VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVA  272 (499)
Q Consensus       198 H~s~~k-----a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia  272 (499)
                      |.+.-.     .....|..- +.+..++|++ ++.+|.|++++...+.+     |.+|++-.  +.+--.-|++++.+||
T Consensus       157 HltHg~~~~~~~v~~sg~~~-~~~~Y~vd~~-t~~IDyd~~~~~A~~~k-----PklIi~G~--SaY~r~id~~~~reIA  227 (490)
T 3ou5_A          157 HLTHGYMSDVKRISATSIFF-ESMPYKLNPK-TGLIDYNQLALTARLFR-----PRLIIAGT--SAYARLIDYARMREVC  227 (490)
T ss_dssp             ------------------------CBCEETT-TTEECHHHHHHHHHHHC-----CSEEEECC--SSCCSCCCHHHHHHHH
T ss_pred             cccccccCCCcccccccccc-cccccccCCC-CCcccHHHHHHHHhhcC-----CCeEEECC--ccCccccCHHHHHHHH
Confidence            544432     122233310 3444556654 46999999999987753     66655544  4455667999999999


Q ss_pred             HHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchh-------------HHHhhcC
Q 010842          273 NEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGL-------------LVKALST  339 (499)
Q Consensus       273 ~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~-------------l~~~~~~  339 (499)
                      ++.|.+|++|.||-.+.+....+...+   +.||++|.+.||.|.+|. +|++++++...             +.+.+..
T Consensus       228 d~vGA~Lm~DmAHiaGLVA~g~~psP~---~~ADvVTtTTHKTLrGPr-GG~Il~~~~~~~~~~k~~~~~~~~~~kkin~  303 (490)
T 3ou5_A          228 DEVKAHLLADMAHISGLVAAKVIPSPF---KHADIVTTTTHKTLRGAR-SGLIFYRKGVKAVDPKTGREIPYTFEDRINF  303 (490)
T ss_dssp             HHHTCEEEEECGGGHHHHHTTSSCCGG---GTCSEEEEESSSTTCSCS-CEEEEEECSEEEECC--CCEEECCCHHHHHH
T ss_pred             hhcccEEEechhhhhhhhcccccCCcc---ccceEEeccccccccCCC-ceEEEeccccccccccccchhHHHHHHHHHh
Confidence            999999999999977665544443333   359999999999999995 67888876311             0000000


Q ss_pred             CccCCCCCCCCCCCcccCCCcccCCCCCCCcH-HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CCCc
Q 010842          340 DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSL-RLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PRHF  417 (499)
Q Consensus       340 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al-~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~  417 (499)
                         -++.              +++++.-...+ +...+++..-...++++.++..++|+.|.+.|.+. |++++. ..+.
T Consensus       304 ---aVFP--------------g~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~-G~~vvsGgTdn  365 (490)
T 3ou5_A          304 ---AVFP--------------SLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDN  365 (490)
T ss_dssp             ---HHTT--------------TTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSS
T ss_pred             ---hcCc--------------cccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCCCc
Confidence               0000              12333222222 22333443334667889999999999999999987 999985 4566


Q ss_pred             eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-----CEEEEEEec---cCCCCcHHHHHHHHHHHHHH
Q 010842          418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-----GLYMLRFAV---GASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----g~~~lRi~~---~~~~~t~~di~~l~~~l~~~  489 (499)
                      ..+.+.+.+.+.        ..++..+.|.+.|+.+-..+...     ....||+..   +.....++|++++.+.|.++
T Consensus       366 HlvLvDl~~~g~--------tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~  437 (490)
T 3ou5_A          366 HLVLVDLRPKGL--------DGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEG  437 (490)
T ss_dssp             SEEEEECGGGTC--------CHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred             eEEEEeccccCC--------CHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHH
Confidence            777777655320        12334445555675432211111     123599976   22345778998888888775


Q ss_pred             HH
Q 010842          490 AD  491 (499)
Q Consensus       490 ~~  491 (499)
                      +.
T Consensus       438 l~  439 (490)
T 3ou5_A          438 VN  439 (490)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}

Probab=99.57  E-value=3.9e-13  Score=136.09  Aligned_cols=327  Identities=11%  Similarity=0.028  Sum_probs=194.8

Q ss_pred             HHHHHHHHHcccCC-cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          105 FLGEMLCACFNSVG-FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       105 ~~~~~l~~~~n~~~-~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      .+.+......+.+. ..|....+..++.+++.+++   +|-....   +.-..+.|.|||.|+..++........     
T Consensus        66 ~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~---~g~~~~~---~~~~~~qt~ggtga~~~a~~~l~~~~~-----  134 (420)
T 4h51_A           66 VVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKII---YGNTVEL---ENLVAVQTLSGTGAVSLGAKLLTRVFD-----  134 (420)
T ss_dssp             HHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHH---HC---CG---GGEEEEEEEHHHHHHHHHHHHHTTTSC-----
T ss_pred             HHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHh---cCCCccc---cccceeeecCchHHHHHHHHHHHHhcC-----
Confidence            34444444444333 35888888999999876654   3322110   001246688999998877765533211     


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCe-EEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANI-RALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v-~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                        .++..|+++++++.+....++..|.   .. ...+..+.+++.+|.+.+.+.+...+   ....+++.+.++||||.+
T Consensus       135 --~pgd~V~ip~P~w~~y~~i~~~aG~---~~V~~~~~~~~~~~~~d~~~~~~~l~~~~---~~~~vll~~~p~NPtG~~  206 (420)
T 4h51_A          135 --AETTPIYLSDPTWPNHYGVVKAAGW---KNICTYAYYDPKTVSLNFEGMKKDILAAP---DGSVFILHQCAHNPTGVD  206 (420)
T ss_dssp             --TTTSCEEEEESCCTHHHHHHHHTTC---CCEEEEECEEGGGTEECHHHHHHHHHHSC---SSCEEEEESSSCTTTCCC
T ss_pred             --CCCCEEEEecCCchhHHHHHHHcCC---eEEEeeccccccccCCCHHHHHHHHhccC---CCcEEEEeCCCCCCCCCC
Confidence              1567899999999999999999998   64 44454433457899999998886532   234567778899999999


Q ss_pred             ---CChhHHHHHHHHhCCEEEeeccccchhccCccchh----hhcCCCCCceeEecccccccCC-CcceEEEEeCchh--
Q 010842          263 ---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH----YLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGL--  332 (499)
Q Consensus       263 ---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~----~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~--  332 (499)
                         +.+++|+++|+++++++++|.+|.++.........    .......--.++.+..|.++.+ .-+|++.+..+..  
T Consensus       207 ~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~  286 (420)
T 4h51_A          207 PSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTK  286 (420)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHH
T ss_pred             CCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccccccccCceEEEEecccCHHH
Confidence               66889999999999999999999887543211110    0111111224566788987655 4588887654421  


Q ss_pred             HHHhhcC-----CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--------HHHHHHHHHHHHHHHHHH
Q 010842          333 LVKALST-----DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--------VLNLQSHIRSDIRLAKMF  399 (499)
Q Consensus       333 l~~~~~~-----~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~~~~~~~~a~~l  399 (499)
                      ..+..+.     ...|...                      ...........+.        .+.++.+.++..++++.+
T Consensus       287 ~~~~~~~l~~~~r~~~s~~----------------------p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R~~l  344 (420)
T 4h51_A          287 RADVKSVMDSLIREEYTCP----------------------PAHGARLAHLILSNNELRKEWEAELSAMAERIRTMRRTV  344 (420)
T ss_dssp             HHHHHHHHHHHHHTTTSSC----------------------CHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcccCcc----------------------hHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1111110     0111100                      1222222222222        234566677788888899


Q ss_pred             HHHHhcCC--C-eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcH
Q 010842          400 EGFVKSDP--R-FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDE  476 (499)
Q Consensus       400 ~~~L~~~~--~-~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~  476 (499)
                      .+.|++..  + |..+.+ +.+.++|  .+..           .+.++.|.+.| +++.+.   |    ||+++  ..++
T Consensus       345 ~~~L~~~g~~~~~~~i~~-q~GmF~~--~gls-----------~e~v~~L~e~~-Vy~~~~---g----Ris~A--gl~~  400 (420)
T 4h51_A          345 YDELLRLQTPGSWEHVIN-QIGMFSF--LGLS-----------KAQCEYCQNHN-IFITVS---G----RANMA--GLTH  400 (420)
T ss_dssp             HHHHHHTTCSSCCTHHHH-CCSSEEE--CCCC-----------HHHHHHHHHTT-EECCTT---C----EEEGG--GCCH
T ss_pred             HHHHHHhCCCCCCCeecC-CCceEEe--cCcC-----------HHHHHHHHhCC-EEEcCC---C----EEEec--cCCH
Confidence            99998752  1 322222 2244443  2321           12234555666 444332   2    99985  3688


Q ss_pred             HHHHHHHHHHHHHHHHHhcc
Q 010842          477 RHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       477 ~di~~l~~~l~~~~~~l~~~  496 (499)
                      +.|++++++|.++.+++.++
T Consensus       401 ~ni~~~a~aI~~vvr~i~re  420 (420)
T 4h51_A          401 ETALMLAQTINDAVRNVNRE  420 (420)
T ss_dssp             HHHHHHHHHHHHHHC-----
T ss_pred             HHHHHHHHHHHHHHHHhhcC
Confidence            99999999999999887654

>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*

Probab=99.56  E-value=1.5e-14  Score=147.75  Aligned_cols=306  Identities=9%  Similarity=-0.062  Sum_probs=190.7

Q ss_pred             hHHHHHHHHHHHcc-cCC--cccccCh-h---hHHHHHHHHHHHHHHcCC--CCccccCCCccEEEcCChHHHHHHHHHH
Q 010842          102 TAGFLGEMLCACFN-SVG--FNWLASP-A---STELEIVVMDWLATMLKL--PKTFMFSGTGGGVIQNTTSDSILVTLIA  172 (499)
Q Consensus       102 ~~~~~~~~l~~~~n-~~~--~~~~~~p-~---~~~lE~~~~~~la~l~g~--~~~~~~~~~~~g~~t~ggt~A~~~al~~  172 (499)
                      ++..+.+.+...+. ...  ..|.... +   ..++++++.+|+.+..+.  +++       ..++|+|+++|+..++.+
T Consensus        70 ~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~-------~iv~t~G~~~al~~~~~~  142 (427)
T 2hox_A           70 EEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDR-------YIVFGVGVTQLIHGLVIS  142 (427)
T ss_dssp             HHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTC-------EEEEESHHHHHHHHHHHH
T ss_pred             CCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCC-------EEEEeCCHHHHHHHHHHH
Confidence            33445555555552 222  2255444 5   688999988888876543  332       468999999998887776


Q ss_pred             H--------HHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842          173 A--------RDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG  244 (499)
Q Consensus       173 a--------r~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g  244 (499)
                      .        .+           ++..|+++.+.|..+...++..|.   +++.        |.+|+++|+++++++    
T Consensus       143 l~~~~~~~~~~-----------~Gd~Vlv~~P~y~~~~~~~~~~g~---~~~~--------~~~d~~~l~~~~~~~----  196 (427)
T 2hox_A          143 LSPNMTATPDA-----------PESKVVAHAPFYPVFREQTKYFDK---KGYV--------WAGNAANYVNVSNPE----  196 (427)
T ss_dssp             HSCCTTTCTTS-----------CCEEEEECSSCCHHHHHHHHHSCB---TTEE--------EEEEGGGGTTCSCGG----
T ss_pred             HhhccccccCC-----------CCCEEEEeCCCcccHHHHHHHcCC---eeee--------ecCCHHHHHHhhcCC----
Confidence            5        21           567899999999999999999998   7652        357788888777543    


Q ss_pred             CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-Ccce
Q 010842          245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCC  323 (499)
Q Consensus       245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g  323 (499)
                        +.+|+++.++||||.+-+ +.    ++  +++.+.|.++-..   .......   ....+.+..+.+|.++.| .-+|
T Consensus       197 --~k~v~l~~p~NPtG~~~~-~~----l~--~~~~i~d~~~~~~---~~s~~~~---~~~~~i~~~S~SK~~g~~G~RiG  261 (427)
T 2hox_A          197 --QYIEMVTSPNNPEGLLRH-AV----IK--GCKSIYDMVYYWP---HYTPIKY---KADEDILLFTMSKFTGHSGSRFG  261 (427)
T ss_dssp             --GEEEEEESSCTTTCCCCC-CS----ST--TCEEEEECTTCST---TTSCCCS---CBCCSEEEEEHHHHTSCGGGCCE
T ss_pred             --ceEEEEcCCCCCcccccH-HH----Hc--CCCEEEeecccCC---CCCcccc---CCCceEEEEeChhcCCCCCceEE
Confidence              347888899999999988 42    33  6778888766321   0011111   134789999999998755 4489


Q ss_pred             EEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc--H-----------HHHHHHHH
Q 010842          324 CLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG--V-----------LNLQSHIR  390 (499)
Q Consensus       324 ~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~-----------~g~~~~~~  390 (499)
                      +++++++.... .+.....+...                    ....+..+++...+.  .           +.+++..+
T Consensus       262 ~~~~~~~~l~~-~l~~~~~~~~~--------------------~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~  320 (427)
T 2hox_A          262 WALIKDESVYN-NLLNYMTKNTE--------------------GTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFK  320 (427)
T ss_dssp             EEEECCHHHHH-HHHHHHHHHTS--------------------SCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHH
T ss_pred             EEEECCHHHHH-HHHHHHHhcCC--------------------CCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHH
Confidence            99887654432 22111111000                    011233333333331  1           23445567


Q ss_pred             HHHHHHHHHHHHHhcCCCeEE--Ec-C----------CC-ceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEE
Q 010842          391 SDIRLAKMFEGFVKSDPRFEI--VV-P----------RH-FALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLT  455 (499)
Q Consensus       391 ~~~~~a~~l~~~L~~~~~~~~--~~-~----------~~-~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~  455 (499)
                      +..++.+++.+.|++.|++++  +. +          |. ...+++++...           ..++.+++. +.|+.+..
T Consensus       321 ~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~-----------~~~~~~~ll~~~gI~v~p  389 (427)
T 2hox_A          321 KLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWE-----------EDKDCYQTFQNGRINTQN  389 (427)
T ss_dssp             HHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSG-----------GGCSHHHHHHHTTEECEE
T ss_pred             HHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCCc-----------HHHHHHHHHHHCCEEEcC
Confidence            777888999999999888875  21 1          12 33444555421           123455554 56755444


Q ss_pred             eeeEC-CEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          456 HTIVG-GLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       456 ~~~~~-g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      +..+. +..++|++++   +++++++++++.|.++.
T Consensus       390 g~~f~~~~~~~Ris~~---~~~e~l~~~l~~l~~~~  422 (427)
T 2hox_A          390 GVGFEASSRYVRLSLI---KTQDDFDQLMYYLKDMV  422 (427)
T ss_dssp             GGGGTSCTTEEEEECS---SCHHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCEEEEEec---CCHHHHHHHHHHHHHHH
Confidence            44443 3568999996   37889999999998765

>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*

Probab=99.52  E-value=4.2e-12  Score=129.21  Aligned_cols=302  Identities=12%  Similarity=0.019  Sum_probs=167.6

Q ss_pred             HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC
Q 010842          130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG  209 (499)
Q Consensus       130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G  209 (499)
                      +|.++.+.+++++.-.+.        ..|+++|||||..|+..||....        ++.+|......|-...-+....+
T Consensus       128 ~~~~lae~l~~~~p~~~~--------v~f~~SGsEA~e~AiklAr~~tg--------r~~ii~~~~~yHG~t~~~~~~~~  191 (454)
T 4ao9_A          128 LEGRLARLICERFPQIEQ--------LRFTNSGTEANLMALTAALHFTG--------RRKIVVFSGGYHGGVLGFGARPS  191 (454)
T ss_dssp             SHHHHHHHHHHHSTTCSE--------EEEESSHHHHHHHHHHHHHHHHT--------CCEEEEETTCBCSTTCBBSSSBC
T ss_pred             HHHHHHHHHHHhCCCCCE--------EEEeCchHHHHHHHHHHHHhccc--------CCeEEEEeCCcCCcccccccccc
Confidence            445555668888743232        48999999999999999987641        22233344444543211100000


Q ss_pred             CC--CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEEeec
Q 010842          210 VS--PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDA  283 (499)
Q Consensus       210 ~g--~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~  283 (499)
                      -.  ......+|.       -|++.+++.+++..   ..+.+|++--.....|.+-|    |++|.++|++||++|++|+
T Consensus       192 ~~~~~~~~~~~p~-------nd~~~l~~~l~~~~---~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DE  261 (454)
T 4ao9_A          192 PTTVPFDFLVLPY-------NDAQTARAQIERHG---PEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDE  261 (454)
T ss_dssp             TTSCCSEEEEECT-------TCHHHHHHHHHHTG---GGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred             CccCCCCcccCCC-------chHHHHHHHHhhcC---CceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEEC
Confidence            00  001222332       38899999987643   23445555554556788877    9999999999999999999


Q ss_pred             cccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccC
Q 010842          284 AYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVG  363 (499)
Q Consensus       284 A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~  363 (499)
                      ++.|  .....+.....|+. .|.+++.  |.++..+..|.+..+.+  +.+.+......+..                .
T Consensus       262 V~tG--R~G~~~a~e~~gv~-PDi~t~g--K~lggG~Piga~~~~~e--i~~~~~~~~~~~~h----------------~  318 (454)
T 4ao9_A          262 VMTS--RLAPHGLANKLGIR-SDLTTLG--KYIGGGMSFGAFGGRAD--VMALFDPRTGPLAH----------------S  318 (454)
T ss_dssp             TTGG--GGSTTCHHHHHTCC-CSEEEEE--GGGGTTSSCEEEEECHH--HHGGGCTTTCSCCC----------------C
T ss_pred             CCcC--CCccccchhccCCC-CcEEEec--cccCCCCcceeeeeHHH--HHHHHhhccCCccc----------------c
Confidence            9865  22222222334553 7888764  77766677888888764  22333221111111                1


Q ss_pred             CCCCCCcHHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CC-eEEEcCCCceEEEEEecCCCCCCcc--
Q 010842          364 TGRRFKSLRLW---MVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD----PR-FEIVVPRHFALVCFRLNPYPHSGSA--  433 (499)
Q Consensus       364 ~sr~~~al~~~---~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~----~~-~~~~~~~~~~~v~f~~~~~~~~~~~--  433 (499)
                      .+-....+.+.   ++|+.+-.+   +..++..++.++|++.|+++    +- .++-.  ...++.+.+........+  
T Consensus       319 ~T~~gnPla~AAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg--~G~m~gi~f~~~~~~~~~~~  393 (454)
T 4ao9_A          319 GTFNNNVMTMAAGYAGLTKLFTP---EAAGALAERGEALRARLNALCANEGVAMQFTG--IGSLMNAHFVQGDVRSSEDL  393 (454)
T ss_dssp             CTTTTCHHHHHHHHHHHHHTSCH---HHHHHHHHHHHHHHHHHHHHHHHHTBSCEEEE--ETTEEEEESCCSCCCSGGGG
T ss_pred             CCCCCCHHHHHHHHHHHHHHhcc---ChhHHHHHHHHHHHHHHHHHHhhCCCCEEEee--eceEEEEEEecCCCCCHHHH
Confidence            11122334444   444444333   34555666666666666542    21 11111  122344444321111100  


Q ss_pred             --hhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          434 --DTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       434 --~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                        ........+...|.++|+ ++.+.   +  .+.++   ...|++|||+++++|+++..++.
T Consensus       394 ~~~d~~~~~~~~~~ll~~Gv-~~~p~---~--~~~~s---~~~T~~dId~~l~al~~~l~~~~  447 (454)
T 4ao9_A          394 AAVDGRLRQLLFFHLLNEDI-YSSPR---G--FVVLS---LPLTDADIDRYVAAIGSFIGGHG  447 (454)
T ss_dssp             TTCCHHHHHHHHHHHHHTTE-ECCTT---C--EEECC---TTCCHHHHHHHHHHHHHHHHHSG
T ss_pred             HhhhHHHHHHHHHHHHHCCE-EEcCC---C--CEEEe---CCCCHHHHHHHHHHHHHHHHhcc
Confidence              113455677788888884 33332   1  23333   44789999999999999988753

>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*

Probab=99.46  E-value=4.1e-10  Score=115.00  Aligned_cols=316  Identities=13%  Similarity=0.053  Sum_probs=178.6

Q ss_pred             HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhC
Q 010842          130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAG  209 (499)
Q Consensus       130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G  209 (499)
                      .+.++.+.|++++..+..      ...+|+++|||||..|+..||....        ++.+|......|-...-+....|
T Consensus       108 ~~~~lae~L~~~~p~~~~------~~v~f~~sGsEA~e~AlklAr~~t~--------r~~ii~~~~~yHG~t~~als~t~  173 (456)
T 4atq_A          108 GYVAVTEQLNRLTPGDHA------KRTVLFNSGAEAVENAVKVARLATG--------RDAVVAFDHAYHGRTNLTMALTA  173 (456)
T ss_dssp             HHHHHHHHHHHHSSCSSC------EEEEEESSHHHHHHHHHHHHHHHHC--------CCEEEEETTCCCCSSHHHHHHCC
T ss_pred             HHHHHHHHHHHhCCCCCC------cEEEEeCChHHHHHHHHHHHhhhhc--------CCeEEEEecccCCcccccccccc
Confidence            344455668888753221      1247899999999999999987531        23334444455655544444433


Q ss_pred             CC----------CCCeEEeeCCCC----CCCccCHHHHHHHHHHHHH--cCCccEEEEEecCCCcccccCC----hhHHH
Q 010842          210 VS----------PANIRALPTSVD----ANFSLSPQLLRRAVEADVE--AGLVPLFLCATVGTTSTTAVDN----VEPLA  269 (499)
Q Consensus       210 ~g----------~~~v~~v~~~~~----~~~~~d~~~L~~~i~~~~~--~g~~p~~vv~t~gtt~~G~id~----l~~I~  269 (499)
                      -.          ...+..+|....    .....+.+.+++.++...+  .+..+.+|++--.....|.+-|    +++|.
T Consensus       174 ~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr  253 (456)
T 4atq_A          174 KAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALS  253 (456)
T ss_dssp             CCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHH
T ss_pred             CccccccCCCCccccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHH
Confidence            21          124566665311    0012345666665554222  2334555665544455676643    89999


Q ss_pred             HHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCC
Q 010842          270 EVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPS  349 (499)
Q Consensus       270 ~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~  349 (499)
                      ++|++||+.|++|.++.|+.....-+.....|+. .|.+++.  |.++..+..|.++.+++-  ...+.  +..      
T Consensus       254 ~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~-PDivt~g--K~lggg~P~~av~~~~~i--~~~~~--~~~------  320 (456)
T 4atq_A          254 EWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVV-PDIITMA--KGIAGGLPLSAITGRADL--LDAVH--PGG------  320 (456)
T ss_dssp             HHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCC-CSEEEEC--GGGGTTSSCEEEEEEHHH--HTTSC--TTS------
T ss_pred             HHHhhcCCceEecccccccCCccccccccccCCC-Cchhhhh--hcccCcCCceeeEecHHH--Hhccc--ccC------
Confidence            9999999999999999886444333333334553 8999886  777666778888887642  11111  110      


Q ss_pred             CCCCcccCCCcccCCCCCCCcHHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC--eEEEcCC--Cce
Q 010842          350 ESNSVVDFKDWQVGTGRRFKSLRLWMV---LRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPR--FEIVVPR--HFA  418 (499)
Q Consensus       350 ~~~~~~~~~~~~~~~sr~~~al~~~~~---l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~--~~~~~~~--~~~  418 (499)
                                  ...+-....+.+.++   |+.+-.++   +.++..++.+++.+.|++    .+.  -.++.+.  ...
T Consensus       321 ------------~~~Tf~gnpla~aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~~~~~v~~VRG~Gl  385 (456)
T 4atq_A          321 ------------LGGTYGGNPVACAAALAAIDTMEQHD---LNGRARHIEELALGKLRELAAELSAGGGSVVGDIRGRGA  385 (456)
T ss_dssp             ------------SCCSSSSCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEEEETT
T ss_pred             ------------CCCCCCCChHHHHhhHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHHhcccccCCceEEeeecce
Confidence                        011122234444444   44443443   345555556666655544    221  1112111  122


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      ++.+.+..+.  +.+...+...++.+++.++|.++..... . ...+|+... ...|+++||+++++|.++.+.
T Consensus       386 ~~giel~~~~--~~~~~~~~~~~v~~~~~~~Gvl~~~~g~-~-~~~irl~Pp-L~it~~~id~~l~~l~~al~a  454 (456)
T 4atq_A          386 MLAIELVQPG--SKEPNAELTKAVAAACLKEGVIILTCGT-Y-GNVIRLLPP-LVISDELLIDGLEVLAAAIKA  454 (456)
T ss_dssp             EEEEEEBCTT--SCCBCHHHHHHHHHHHHHTTEECEEECT-T-SCEEEECCC-TTCCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEEecCC--CCCcCHHHHHHHHHHHHHCCCEEEecCC-C-CCEEEEECC-CCCCHHHHHHHHHHHHHHHHh
Confidence            3445543321  1112245677889999999965433221 1 246999873 567999999999999998764

>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*

Probab=99.11  E-value=2.2e-14  Score=146.94  Aligned_cols=304  Identities=11%  Similarity=0.001  Sum_probs=166.0

Q ss_pred             HHHHHHHHHHHHHHc-CCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC-CchhHHHHH
Q 010842          128 TELEIVVMDWLATML-KLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ-THSTFAKVC  205 (499)
Q Consensus       128 ~~lE~~~~~~la~l~-g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~-~H~s~~ka~  205 (499)
                      ...+.++.+.|++++ +.+.         .++++|||+||..|+.++|...         ++..|++.+. .|.+...++
T Consensus       139 ~~~~~~Lae~L~~~~p~~~~---------v~~~nSGseA~~~Aik~ar~~t---------gr~~ii~~~~~yHG~~~~~~  200 (465)
T 2yky_A          139 TENEALFAEAVCDRFPSIDL---------VRFTNSGTEANLMALATATAIT---------GRKTVLAFDGGYHGGLLNFA  200 (465)
Confidence            344555556688887 4322         3899999999999999887432         2233444444 454443333


Q ss_pred             ---HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCE
Q 010842          206 ---KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIW  278 (499)
Q Consensus       206 ---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~  278 (499)
                         ...|+.. .++.+|.       -|+++|+++|++.   +..+.+|++....+++|.+-|    +++|.++|++||++
T Consensus       201 sg~~~~g~~~-~~~~~~~-------~d~~~l~~~l~~~---~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~l  269 (465)
T 2yky_A          201 SGHAPTNAPY-HVVLGVY-------NDVEGTADLLKRH---GHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGAL  269 (465)
Confidence               1122211 1222221       3789999999742   112335555554556897766    99999999999999


Q ss_pred             EEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcC---CccCCCCCCCCCCCcc
Q 010842          279 VHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALST---DPEYLKNKPSESNSVV  355 (499)
Q Consensus       279 lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~---~~~yl~~~~~~~~~~~  355 (499)
                      |++|++|. + ...+.......++ ..|.+++  .|+++.....|+++.+++  +.+.+..   .+-+...         
T Consensus       270 lI~DEv~~-~-r~g~~~a~~~~gv-~pDi~t~--sK~lg~G~piG~v~~~~~--i~~~l~~~~~g~~~~~~---------  333 (465)
T 2yky_A          270 LIFDEVMT-S-RLSGGGAQEMLGI-SADLTTL--GKYIGGGMSFGAFGGRRD--LMERFDPARDGAFAHAG---------  333 (465)
Confidence            99999998 4 2211111111122 2576654  599987666888877653  2122211   0001000         


Q ss_pred             cCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEE--cCCCceEEEEEecCCCC--C
Q 010842          356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP-RFEIV--VPRHFALVCFRLNPYPH--S  430 (499)
Q Consensus       356 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~-~~~~~--~~~~~~~v~f~~~~~~~--~  430 (499)
                           ++ .+.+.......++++.+..+   .+.++..++.+++++.|+++. ...+.  ......++.+.+.....  .
T Consensus       334 -----T~-~~npla~aAa~aaL~~l~~~---~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~g~G~~~~i~~~~~~~~~~  404 (465)
T 2yky_A          334 -----TF-NNNILTMSAGHAALTQIYTR---QAASDLSASGDRFRANLNRIAVENQAPLQFTGLGSLGTIHFSRAPIRSA  404 (465)
Confidence                 00 11122222333344444332   456677777888888777642 12221  12334455555532100  0


Q ss_pred             Cc--chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          431 GS--ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       431 ~~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      .+  ........++.+.|.++|.++. +..+..     ++   ...|++||++++++|.++.+++.
T Consensus       405 ~~~~~~d~~~~~~~~~~ll~~GV~v~-p~~~~~-----~s---~~~t~edid~~l~~l~~~l~~~~  461 (465)
T 2yky_A          405 GDVRAADQQLKELFFFHMLRKGIYLA-PRGMYA-----LS---LEIADAGRDAFAEALADFIGEQR  461 (465)
Confidence            00  0001234567888888886543 322211     33   44799999999999999877653

>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A

Probab=99.35  E-value=4.9e-10  Score=114.87  Aligned_cols=328  Identities=12%  Similarity=0.040  Sum_probs=179.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEE-cCCCCchhHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVY-GSDQTHSTFAKVC  205 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~-~s~~~H~s~~ka~  205 (499)
                      ++.+.++.+.|++++..+-+       ...|+++|||||..|+..||.....+    |. .+..|+ .....|-...-++
T Consensus       110 ~~~~~~lAe~L~~~~p~~~~-------~v~f~~sGsEA~e~AiKlAr~~~~~~----g~~~r~~ii~~~~~yHG~t~~a~  178 (473)
T 4e3q_A          110 SDQTVMLSEKLVEVSPFDSG-------RVFYTNSGSEANDTMVKMLWFLHAAE----GKPQKRKILTRWNAYHGVTAVSA  178 (473)
T ss_dssp             EHHHHHHHHHHHHHSSCSSC-------EEEEESSHHHHHHHHHHHHHHHHHHT----TCTTCCEEEEETTCCCCSSHHHH
T ss_pred             CHHHHHHHHHHHhhCCCCcc-------EEEEeCchHHHHHHHHHHHHHHHHhc----CCCCcceEEEeeceECCCccccc
Confidence            33445566778888865432       24899999999999999998653322    21 233343 3444565555454


Q ss_pred             HHhC--------CCCCCeEEeeCCCC---CC-Ccc-------CHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC--
Q 010842          206 KLAG--------VSPANIRALPTSVD---AN-FSL-------SPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN--  264 (499)
Q Consensus       206 ~~~G--------~g~~~v~~v~~~~~---~~-~~~-------d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~--  264 (499)
                      ...|        ........++....   +. ...       ..++|++.|.+..  ...+.+|++--.....|.+-|  
T Consensus       179 s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~iAavi~EPiqg~gG~~~p~~  256 (473)
T 4e3q_A          179 SMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQREG--ADTIAGFFAEPVMGAGGVIPPAK  256 (473)
T ss_dssp             HHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHHHC--GGGEEEEEECSSBSTTTSBCCCT
T ss_pred             cccccccccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHhhC--CCceEEEEeCCccCCCCceeCCH
Confidence            4433        22223444543210   00 011       1234555554321  223455555554455676633  


Q ss_pred             --hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCc
Q 010842          265 --VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDP  341 (499)
Q Consensus       265 --l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~  341 (499)
                        +++|.++|++||+.|++|+++.|+.....-+.....++. .|.+++.  |.++.. +..|.++++++- . +.+....
T Consensus       257 ~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~-PDi~t~~--K~l~gG~~Pl~av~~~~~i-~-~~~~~~~  331 (473)
T 4e3q_A          257 GYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFT-PDAIISS--KNLTAGFFPMGAVILGPEL-S-KRLETAI  331 (473)
T ss_dssp             THHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCC-CSEEEEC--GGGGTTSSCCEEEEECHHH-H-HHHHHHH
T ss_pred             HHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCC-CChHHhc--ccccCCCCCcccccccHHH-H-HHhcccc
Confidence              899999999999999999999887443333333334553 7988874  777655 678888887752 1 2221100


Q ss_pred             cCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHH---HHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEcCC
Q 010842          342 EYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVL---RSYGVLNLQSHIRSDIRLAKMFEGFVKSD---PRFEIVVPR  415 (499)
Q Consensus       342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l---~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~  415 (499)
                      .....             +....+.....+...+++   +.+-.++   .+++..++.++|.+.|+++   |.+.-+. -
T Consensus       332 ~~~~~-------------~~hg~T~~Gnpla~Aaala~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~v~~vR-G  394 (473)
T 4e3q_A          332 EAIEE-------------FPHGFTASGHPVGCAIALKAIDVVMNEG---LAENVRRLAPRFEERLKHIAERPNIGEYR-G  394 (473)
T ss_dssp             HHHSC-------------CCCCCTTTTCHHHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHTTSTTEEEEE-E
T ss_pred             ccccc-------------cccCCCCCCCcchhhhhhhhhhhhcccc---HHHHHHHHHHHHHHHHHHHhcCCCeeEEe-e
Confidence            00000             000111122344444444   4443333   4555666777777777653   4432111 1


Q ss_pred             CceEEEEEecCCCCCC-c-chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          416 HFALVCFRLNPYPHSG-S-ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       416 ~~~~v~f~~~~~~~~~-~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ...++.+.+..+.... . ........++.+.+.++|.++ .+  . | ..+|++.. ...|++|||+++++|.++.+++
T Consensus       395 ~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~-~~--~-g-~~i~l~PP-L~it~~eid~~~~~l~~al~~v  468 (473)
T 4e3q_A          395 IGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLIC-RP--L-G-QSVVLCPP-FILTEAQMDEMFDKLEKALDKV  468 (473)
T ss_dssp             ETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEEC-EE--E-T-TEEEECCC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred             cceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEE-Ee--c-C-CEEEEeCC-CCCCHHHHHHHHHHHHHHHHHH
Confidence            1123444443221000 0 011234567888888999543 22  2 2 35888763 5689999999999999999888


Q ss_pred             hcc
Q 010842          494 FKG  496 (499)
Q Consensus       494 ~~~  496 (499)
                      .++
T Consensus       469 ~ae  471 (473)
T 4e3q_A          469 FAE  471 (473)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            764

>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*

Probab=99.20  E-value=8.1e-10  Score=120.84  Aligned_cols=327  Identities=13%  Similarity=0.045  Sum_probs=167.4

Q ss_pred             HHHHHHHHHcCCC-CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhc------cCCeEEE-cCCCCchhHHHH
Q 010842          133 VVMDWLATMLKLP-KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAEN------MHKLVVY-GSDQTHSTFAKV  204 (499)
Q Consensus       133 ~~~~~la~l~g~~-~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g------~~~~~i~-~s~~~H~s~~ka  204 (499)
                      ++.+.|+++++-+ .+       -.+|+++||+||-.|+..|+.+.....+..+      ..+..|+ .....|-+..-+
T Consensus       428 ~Lae~L~~~~p~~~l~-------~vff~~SGSeA~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~ga  500 (831)
T 4a0g_A          428 KCAELLLDGVGKGWAS-------RVYFSDNGSTAIEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGA  500 (831)
T ss_dssp             HHHHHHHHTTTTTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHH
T ss_pred             HHHHHHHHhCCCCCCC-------EEEECCChhHHHHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceee
Confidence            3445578877632 11       2489999999999999999533322111100      0233344 455568777777


Q ss_pred             HHHhCCCC-------------------------CCeEEeeCCCC------CCC-ccC------------------HHHHH
Q 010842          205 CKLAGVSP-------------------------ANIRALPTSVD------ANF-SLS------------------PQLLR  234 (499)
Q Consensus       205 ~~~~G~g~-------------------------~~v~~v~~~~~------~~~-~~d------------------~~~L~  234 (499)
                      +...|...                         ..+..+++...      +.. .-|                  .++|+
T Consensus       501 ls~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le  580 (831)
T 4a0g_A          501 MEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNGSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLS  580 (831)
T ss_dssp             HHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETTEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHH
T ss_pred             eeccCccccccccccccccCCccccCCccccccCCceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHH
Confidence            77765310                         01112222210      000 001                  25677


Q ss_pred             HHHHHHH--HcCCccEEEEEecC-CCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCce
Q 010842          235 RAVEADV--EAGLVPLFLCATVG-TTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDS  307 (499)
Q Consensus       235 ~~i~~~~--~~g~~p~~vv~t~g-tt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDs  307 (499)
                      +.|++..  .....+.+|++--. ....|.+-+    +++|.++|++||++|++|.++.|+......+.....|+ ..|.
T Consensus       581 ~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv-~PDi  659 (831)
T 4a0g_A          581 KHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGC-KPDI  659 (831)
T ss_dssp             HHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSS-CCSE
T ss_pred             HHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCC-CCcE
Confidence            7765421  11233444444332 355566644    89999999999999999999887643333222222354 3688


Q ss_pred             eEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHH---hcHH
Q 010842          308 FSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRS---YGVL  383 (499)
Q Consensus       308 i~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~---~g~~  383 (499)
                      +|+  -|.++.. ...|+++++++  +.+.+......              ..+....+.....+...+++..   +..+
T Consensus       660 itl--sK~L~gG~~Plgav~~~~~--i~~~~~~~~~~--------------~~~~hg~T~~g~Pla~Aaala~L~~i~~~  721 (831)
T 4a0g_A          660 ACF--AKLLTGGMVPLAVTLATDA--VFDSFSGDSKL--------------KALLHGHSYSAHAMGCATAAKAIQWFKDP  721 (831)
T ss_dssp             EEE--CGGGGTTSSCCEEEEECHH--HHHTTCSSCGG--------------GSCCCCCTTTTCHHHHHHHHHHHHHHHCT
T ss_pred             EEE--ecccccCccCcEEEEECHH--HHHHHhccccc--------------ccceeecCCcccHHHHHHHHHHHHHHHhh
Confidence            875  5888654 35788888764  22333221100              0000111222234444444443   3222


Q ss_pred             HHHHHHHHH-HHH----HHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee
Q 010842          384 NLQSHIRSD-IRL----AKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI  458 (499)
Q Consensus       384 g~~~~~~~~-~~~----a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~  458 (499)
                      .+.+.+.+. ..+    .+.+.+.+++.|.+.-+. ....++.+.+..... ..........++.+.+.++|.++ .+. 
T Consensus       722 ~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~vr-g~Gl~~~iel~~~~~-~~~~~~~~a~~~~~~l~e~Gv~v-~p~-  797 (831)
T 4a0g_A          722 ETNHNITSQGKTLRELWDEELVQQISSHSAVQRVV-VIGTLFALELKADAS-NSGYASLYAKSLLIMLREDGIFT-RPL-  797 (831)
T ss_dssp             TTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEEE-EETTEEEEEEC----------CHHHHHHHHHHHHTTEEC-CCB-
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeEe-ecccEEEEEEecCcc-ccccchHHHHHHHHHHHHCCcEE-Eec-
Confidence            222111110 111    223445566677654432 223445555543210 00000123567888888889543 322 


Q ss_pred             ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          459 VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       459 ~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                        + ..+|++.. +.+|++||++++++|.++.+++
T Consensus       798 --g-~~lrl~pp-~~~t~e~id~~~~~l~~~l~~l  828 (831)
T 4a0g_A          798 --G-NVIYLMCG-PCTSPEICRRLLTKLYKRLGEF  828 (831)
T ss_dssp             --T-TEEEEECC-TTCCHHHHHHHHHHHHHHHTTT
T ss_pred             --C-CEEEEECC-CCCCHHHHHHHHHHHHHHHHHh
Confidence              2 46999974 7789999999999999887654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	499
d1js3a_	476	c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa)	1e-138
d1pmma_	450	c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {	7e-54
d2z67a1	434	c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (	2e-30
d3bc8a1	445	c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase	3e-30
d1gdea_	388	c.67.1.1 (A:) Aromatic aminoacid aminotransferase,	3e-05
d1c4ka2	462	c.67.1.5 (A:108-569) Ornithine decarboxylase major	5e-05
d1ax4a_	465	c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanas	3e-04
d2v1pa1	467	c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptop	6e-04

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]} Length = 476

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  405 bits (1041), Expect = e-138
 Identities = 213/487 (43%), Positives = 295/487 (60%), Gaps = 23/487 (4%)

Query: 17  LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDV 76
           ++A +FR++  +MVD++ADY + IE   V   V+PG+LR  +P +AP  P++FE IL+DV
Sbjct: 1   MNASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDV 60

Query: 77  QEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMD 136
           ++ I+PG+THW SP FFA+FP   S    L +MLC     +GF+W ASPA TELE V+MD
Sbjct: 61  EKIIMPGVTHWHSPYFFAYFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMD 120

Query: 137 WLATMLKLPKTFMFSGTG--GGVIQNTTSDSILVTLIAARDRALDAVGAENMH------- 187
           WL  ML+LP+ F+    G  GGVIQ + S++ LV L+AAR + +  + A +         
Sbjct: 121 WLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVL 180

Query: 188 -KLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV 246
            KLV Y SDQ HS+  +   + GV    I       D  F++    L+ A+E D  AGL+
Sbjct: 181 EKLVAYASDQAHSSVERAGLIGGVKLKAIP-----SDGKFAMRASALQEALERDKAAGLI 235

Query: 247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD 306
           P F+ AT+GTTS  + DN+  +  + +E  IW+HVDAAYAGSA ICPEFRH LNG+E  D
Sbjct: 236 PFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFAD 295

Query: 307 SFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGR 366
           SF+F+PHKWLL   DC  +WVK+   L  A   DP YLK+    S  + D++ WQ+  GR
Sbjct: 296 SFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGR 355

Query: 367 RFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNP 426
           RF+SL++W V R YGV  LQ++IR  ++L+  FE FV  DPRFE+       LVCFRL  
Sbjct: 356 RFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRFEVCAEVTLGLVCFRLKG 415

Query: 427 YPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI 486
                      LN  LL+ +NS  +++L    + G ++LRFA+ +   +  HV  AWE I
Sbjct: 416 SDG--------LNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHI 467

Query: 487 MEGADRL 493
              A  L
Sbjct: 468 RGLAAEL 474

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]} Length = 450

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

 Score =  185 bits (471), Expect = 7e-54
 Identities = 66/464 (14%), Positives = 136/464 (29%), Gaps = 51/464 (10%)

Query: 28  QMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHW 87
           Q+ D  ++   +      ++ +         P     R +    I+ D  E  + G    
Sbjct: 3   QVTDLRSELLDSRFGAKSISTIAE---SKRFPLH-EMRDDVAFQIIND--ELYLDGNARQ 56

Query: 88  LSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKT 147
              N   F          + +++    N    +    P S  +++  ++ +A +   P  
Sbjct: 57  ---NLATF--CQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAP 111

Query: 148 FMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHSTFAKVCK 206
              +G   G     +S++ ++  +A + R    + A                  + K  +
Sbjct: 112 --KNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFAR 169

Query: 207 LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVE 266
              V    I   P        + P+ +  A + +            T G T T   +  +
Sbjct: 170 YWDVELREIPMRPG----QLFMDPKRMIEACDENTIGV------VPTFGVTYTGNYEFPQ 219

Query: 267 P------LAEVANEYGIWVHVDAAYAGS-ACICPEFRHYLNGIERVDSFSFSPHKWLLSY 319
           P        +      I +H+DAA  G  A        +   + RV S S S HK+ L+ 
Sbjct: 220 PLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAP 279

Query: 320 LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSL-RLWMVLR 378
           L C  +  +    L + L  + +YL               + +   R    +   +    
Sbjct: 280 LGCGWVIWRDEEALPQELVFNVDYLG---------GQIGTFAINFSRPAGQVIAQYYEFL 330

Query: 379 SYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFA----LVCFRLNPYPHSGSAD 434
             G         +  ++A      +     +E +           VCF+L      G   
Sbjct: 331 RLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPG-YT 389

Query: 435 TEMLNRKLLD--WVNSTGRVYLTHTIVGGLYMLRFAVGASLTDE 476
              L+ +L    W       +        + ++R         +
Sbjct: 390 LYDLSERLRLRGWQVPA---FTLGGEATDIVVMRIMCRRGFEMD 430

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]} Length = 434

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

 Score =  121 bits (303), Expect = 2e-30
 Identities = 53/464 (11%), Positives = 134/464 (28%), Gaps = 60/464 (12%)

Query: 20  QEFRKQAHQMVDFIADYYQNIESYPVLTQ--VEPGFLRSALPDSAPHRPESFETILKD-- 75
           +   K+   +++      +++ ++  + +  ++   ++  L   +    +     ++   
Sbjct: 12  KNMEKRGELVLNEYLKEIEDVFNHRKIPENGIDDEKIKLFLKFLSMMDTDKDPKSVRIGE 71

Query: 76  VQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVM 135
            + +        +     + F   +  +G L +       +     L           ++
Sbjct: 72  REARTYSK----IHEELSSGFCHGIGRSGNLVDPQPKASGASIMYAL--------TNKIL 119

Query: 136 DWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSD 195
           +     L L                +T  SI + L AAR +             VV    
Sbjct: 120 ESFFKQLGLNV-------HAIATPISTGMSISLCLSAARKK---------YGSNVVIYPY 163

Query: 196 QTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVG 255
            +H +  K     G++   +  +         +  + +  A++ ++E G  P  + +T+ 
Sbjct: 164 ASHKSPIKAVSFVGMNMRLVETVLD--GDRVYVPVEDIENAIKKEIELGNRP-CVLSTLT 220

Query: 256 TTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKW 315
                  D++  +A++   Y I   ++ AYA       E         RVD+   S  K 
Sbjct: 221 FFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKA-FKYRVDAVVSSSDKN 279

Query: 316 LLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWM 375
           LL+ +    ++      + +   + P                             +   +
Sbjct: 280 LLTPIGGGLVYSTDAEFIKEISLSYPGR---------------------ASATPVVNTLV 318

Query: 376 VLRSYGVLNLQSHIRSDIRLAKMFEGFVK---SDPRFEIVVPRHFALVCFRLNPYPHSGS 432
            L S G  N    +++     K+ +  +         + +        C  +N  P   +
Sbjct: 319 SLLSMGSKNYLELVKNQKNSKKLLDELLNDLSKKTGGKFLDVESPIASCISVNSDPVEIA 378

Query: 433 ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDE 476
           A    L       +  T      +        +       +  E
Sbjct: 379 AKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMNAAIGVRTE 422

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]} Length = 445

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  120 bits (301), Expect = 3e-30
 Identities = 49/380 (12%), Positives = 99/380 (26%), Gaps = 46/380 (12%)

Query: 124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA 183
           S    ++   ++  +  +  +            V+   T  S+ +  +  R +   A   
Sbjct: 89  SSLLNKITNSLVLNVIKLAGVHSV-----ASCFVVPMATGMSLTLCFLTLRHKRPKA--- 140

Query: 184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEA 243
                  +        +  K    AG  P  I  +            + +   ++     
Sbjct: 141 -----KYIIWPRIDQKSCFKSMVTAGFEPVVIENVLE--GDELRTDLKAVEAKIQELGPE 193

Query: 244 GLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE 303
            ++   L +T    +    D +E LA +   Y I   V+ AY   +  C         + 
Sbjct: 194 HIL--CLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVG 251

Query: 304 RVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVG 363
           R+D+F  S  K  +  +    +       +       P                      
Sbjct: 252 RIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISKMYPGR-------------------- 291

Query: 364 TGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMF----EGFVKSDPRFEIVVPRHFAL 419
                 SL + + L S G    +  ++    +        +   ++     +  P +   
Sbjct: 292 -ASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPIS 350

Query: 420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVY--LTHTIVGGLYMLRFAVGASLTDER 477
           +   L             L   L     S  R         V G     F   A      
Sbjct: 351 LAMTLKTIDGHHDKAVTQLGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCA 410

Query: 478 HVVAAWELIM--EGADRLFK 495
           ++ AA  + M  +  D   K
Sbjct: 411 YLNAAAAIGMKMQDVDLFIK 430

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Length = 388

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

 Score = 43.7 bits (102), Expect = 3e-05
 Identities = 23/140 (16%), Positives = 44/140 (31%), Gaps = 14/140 (10%)

Query: 195 DQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATV 254
                ++A    LAG        +PT  +  F L+   L++ V     A ++      T 
Sbjct: 117 TPAFVSYAPAVILAG---GKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTG 173

Query: 255 GTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD------SF 308
              +     ++E +A+   E+ + V  D  Y              +     +       F
Sbjct: 174 AVLT---KKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGF 230

Query: 309 S--FSPHKWLLSYLDCCCLW 326
           S  F+   W L ++      
Sbjct: 231 SKTFAMTGWRLGFVAAPSWI 250

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]} Length = 462

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

 Score = 43.1 bits (100), Expect = 5e-05
 Identities = 31/261 (11%), Positives = 66/261 (25%), Gaps = 14/261 (5%)

Query: 157 VIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIR 216
            +   +S++      A        +   N HK V   +           +    +P    
Sbjct: 86  FVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQT-NRNPYGFI 144

Query: 217 ALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG 276
                 D +     +L  +      +           +GT   T + N   + +      
Sbjct: 145 GGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGT-IYNAHEVVKRIGHLC 203

Query: 277 IWVHVDAAYAGSACICPEFRHYL-------NGIERVDSFSFSPHKWLLSYLDCCCLWVKQ 329
            ++  D+A+ G     P  R+            +       S HK    +     +  K 
Sbjct: 204 DYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKD 263

Query: 330 PGLLVKALSTDPEYLKNKPS--ESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQS 387
             +  +    D ++  N  +   S S        +      +       L    ++    
Sbjct: 264 SHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIE 323

Query: 388 HIRSDIRLAKMFEGFVKSDPR 408
             +   +L K    F    P 
Sbjct: 324 ARK---KLIKAGSMFRPFVPP 341

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]} Length = 465

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

 Score = 40.7 bits (94), Expect = 3e-04
 Identities = 53/389 (13%), Positives = 100/389 (25%), Gaps = 38/389 (9%)

Query: 124 SPASTELEIVVMDWLATMLKLPKTFMF-SGTGGGVIQNTTSDSILVTLIAARDRALDAVG 182
           S    +L+    D    +           G G           +L+       +A + V 
Sbjct: 74  SRNYYDLK----DKAKELFNYDYIIPAHQGRGA----ENILFPVLLKYKQKEGKAKNPVF 125

Query: 183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE 242
             N H    + +   H        +  V+        T  D       + L+  +     
Sbjct: 126 ISNFH----FDTTAAHVELNGCKAINIVTEKAF-DSETYDDWKGDFDIKKLKENIAQHGA 180

Query: 243 AGLVPLFLCATVGTTSTTAVD--NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN 300
             +V +    T  +     V   N++ + E+A ++GI+V +D+A         + R    
Sbjct: 181 DNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKY 240

Query: 301 G-----------IERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPS 349
                        +  D+ + S  K  L  +           +   A             
Sbjct: 241 KNATIKEVIFDMYKYADALTMSAKKDPLLNIGGLVAIRDNEEIFTLARQRCVPMEGFVTY 300

Query: 350 ESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVL--NLQSHIRSDIRLAKMFEGFVKSDP 407
              +  D      G     +   L   +     L   L+               FV    
Sbjct: 301 GGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLREAGIPIQYPTGGHAVFVDCKK 360

Query: 408 RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRF 467
               +    F         Y  SG    E+ +  LL    +TG              +R 
Sbjct: 361 LVPQIPGDQFPAQAVINALYLESGVRAVEIGSF-LLGRDPATGEQKHADMEF-----MRL 414

Query: 468 AVGA-SLTDE--RHVVAAWELIMEGADRL 493
            +     T++   ++  A   + E    L
Sbjct: 415 TIARRVYTNDHMDYIADALIGLKEKFATL 443

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]} Length = 467

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

 Score = 39.9 bits (92), Expect = 6e-04
 Identities = 26/210 (12%), Positives = 55/210 (26%), Gaps = 35/210 (16%)

Query: 124 SPASTELEIVVMDWLATMLKLPKT-FMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG 182
           S +   L     + +  +     T     G G             + +     +     G
Sbjct: 73  SRSYYALA----ESVKNIFGYQYTIPTHQGRGA----------EQIYIPVLIKKREQEKG 118

Query: 183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANI-----RALPTSVDANFSLSPQLLRRAV 237
            +    +          T     ++ G +  N+            D   +   + L R +
Sbjct: 119 LDRSKMVAFSNY--FFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGI 176

Query: 238 EADVEAGLVPLFLCATVGTTSTTAVD--NVEPLAEVANEYGIWVHVDAAYAGSACICPEF 295
           E      +  +    T  +     V   N++ +  +A +Y I V +D+A         + 
Sbjct: 177 EEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQ 236

Query: 296 RHYLNG-----------IERVDSFSFSPHK 314
           R                 +  D  + S  K
Sbjct: 237 REAEYKDWTIEQITRETYKYADMLAMSAKK 266

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	499
d1js3a_	476	DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]	100.0
d1pmma_	450	Glutamate decarboxylase beta, GadB {Escherichia co	100.0
d3bc8a1	445	Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mu	100.0
d2z67a1	434	Selenocysteinyl-tRNA synthase (SepSecS) {Methanoco	100.0
d1jf9a_	405	NifS-like protein/selenocysteine lyase {Escherichi	99.97
d1elua_	381	Cystine C-S lyase C-des {Synechocystis sp. [TaxId:	99.97
d1t3ia_	408	Probable cysteine desulfurase SufS {Synechocystis	99.96
d1p3wa_	391	Cysteine desulfurase IscS {Escherichia coli [TaxId	99.95
d2e7ja1	364	Selenocysteinyl-tRNA synthase (SepSecS) {Archaeogl	99.95
d1h0ca_	388	Alanine-glyoxylate aminotransferase {Human (Homo s	99.94
d1qz9a_	404	Kynureninase {Pseudomonas fluorescens [TaxId: 294]	99.93
d1eg5a_	376	NifS-like protein/selenocysteine lyase {Thermotoga	99.93
d1wyua1	437	Glycine dehydrogenase (decarboxylating) subunit 1	99.91
d1j32a_	388	Aspartate aminotransferase, AAT {Phormidium lapide	99.9
d1c4ka2	462	Ornithine decarboxylase major domain {Lactobacillu	99.9
d1v72a1	345	Phenylserine aldolase PSALD {Pseudomonas putida [T	99.9
d1wyub1	471	Glycine dehydrogenase subunit 2 (P-protein) {Therm	99.9
d1fc4a_	401	2-amino-3-ketobutyrate CoA ligase {Escherichia col	99.89
d1m32a_	361	2-aminoethylphosphonate transaminase {Salmonella t	99.89
d1vjoa_	377	Alanine-glyoxylate aminotransferase {Cyanobacteria	99.89
d1b5pa_	382	Aspartate aminotransferase, AAT {Thermus thermophi	99.88
d1gdea_	388	Aromatic aminoacid aminotransferase, AroAT {Archae	99.87
d2ch1a1	388	3-hydroxykynurenine transaminase {Malaria mosquito	99.87
d2bkwa1	382	Alanine-glyoxylate aminotransferase {Baker's yeast	99.87
d2bwna1	396	5-aminolevulinate synthase {Rhodobacter capsulatus	99.87
d1bs0a_	383	PLP-dependent acyl-CoA synthase (8-amino-7-oxonano	99.86
d1d2fa_	361	Modulator in mal gene expression, MalY {Escherichi	99.86
d1mdoa_	376	Aminotransferase ArnB {Salmonella typhimurium [Tax	99.86
d1b9ha_	384	3-amino-5-hydroxybenzoic acid synthase (AHBA synth	99.85
d1xi9a_	395	Putative alanine aminotransferase {Pyrococcus furi	99.85
d1bw0a_	412	Tyrosine aminotransferase (TAT) {Trypanosoma cruzi	99.85
d1iaya_	428	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.85
d1m7ya_	431	1-aminocyclopropane-1-carboxylate synthase (ACC sy	99.85
d1m6sa_	343	Low-specificity threonine aldolase {Thermotoga mar	99.84
d1iuga_	348	Subgroup IV putative aspartate aminotransferase {T	99.84
d1v2da_	368	Glutamine aminotransferase {Thermus thermophilus [	99.83
d1c7na_	394	Cystalysin {Treponema denticola [TaxId: 158]}	99.83
d1svva_	340	Low-specificity threonine aldolase {Leishmania maj	99.82
d1vp4a_	420	Putative aminotransferase TM1131 {Thermotoga marit	99.81
d1o4sa_	375	Aspartate aminotransferase, AAT {Thermotoga mariti	99.81
d1lc5a_	355	L-threonine-O-3-phosphate decarboxylase CobD {Salm	99.81
d1wsta1	403	Multiple substrate aminotransferase, MSAT {Thermoc	99.8
d2gb3a1	389	AAT homologue TM1698 {Thermotoga maritima [TaxId:	99.8
d2fnua1	371	Spore coat polysaccharide biosynthesis protein C {	99.79
d1c7ga_	456	Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 5	99.78
d2v1pa1	467	Tryptophan indol-lyase (tryptophanase) {Escherichi	99.77
d1u08a_	382	Putative methionine aminotransferase YdbL {Escheri	99.77
d1ax4a_	465	Tryptophan indol-lyase (tryptophanase) {Proteus vu	99.77
d2r5ea1	418	Kynurenine--oxoglutarate transaminase I {Yellowfev	99.76
d2c0ra1	361	Phosphoserine aminotransferase, PSAT {Bacillus cir	99.76
d1w7la_	418	Kynurenine--oxoglutarate transaminase I {Human (Ho	99.75
d1bjna_	360	Phosphoserine aminotransferase, PSAT {Escherichia	99.74
d1y4ia1	397	Methionine gamma-lyase, MGL {Citrobacter freundii	99.72
d1fg7a_	354	Histidinol-phosphate aminotransferase HisC {Escher	99.7
d1gc0a_	392	Methionine gamma-lyase, MGL {Pseudomonas putida [T	99.7
d2aeua1	366	Hypothetical protein MJ0158 {Archaeon Methanococcu	99.7
d1kl1a_	405	Serine hydroxymethyltransferase {Bacillus stearoth	99.68
d1cs1a_	384	Cystathionine gamma-synthase, CGS {Escherichia col	99.67
d1o69a_	374	Aminotransferase homolog WlaK (PglE, Cj1121c) {Cam	99.67
d1dfoa_	416	Serine hydroxymethyltransferase {Escherichia coli	99.66
d2f8ja1	334	Histidinol-phosphate aminotransferase HisC {Thermo	99.66
d1w23a_	360	Phosphoserine aminotransferase, PSAT {Bacillus alc	99.64
d7aata_	401	Aspartate aminotransferase, AAT {Chicken (Gallus g	99.63
d1ibja_	380	Cystathionine beta-lyase, CBL {Thale cress (Arabid	99.62
d1e5ea_	394	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.61
d2q7wa1	396	Aspartate aminotransferase, AAT {Escherichia coli	99.61
d1ajsa_	412	Aspartate aminotransferase, AAT {Pig (Sus scrofa),	99.6
d1qgna_	398	Cystathionine gamma-synthase, CGS {Common tobacco	99.6
d2ay1a_	394	Aromatic aminoacid aminotransferase, AroAT {Paraco	99.6
d1pffa_	331	Methionine gamma-lyase, MGL {Trichomonas vaginalis	99.59
d2a7va1	463	Serine hydroxymethyltransferase {Human (Homo sapie	99.59
d1rv3a_	470	Serine hydroxymethyltransferase {Rabbit (Oryctolag	99.58
d1yaaa_	412	Aspartate aminotransferase, AAT {Baker's yeast (Sa	99.57
d2ctza1	421	O-acetyl-L-homoserine sulfhydrylase {Thermus therm	99.57
d1cl1a_	391	Cystathionine beta-lyase, CBL {Escherichia coli [T	99.54
d3tata_	397	Aromatic aminoacid aminotransferase, AroAT {Escher	99.52
d1n8pa_	393	Cystathionine gamma-lyase (CYS3) {Baker's yeast (S	99.46
d2byla1	404	Ornithine aminotransferase {Human (Homo sapiens) [	99.43
d1vefa1	387	Acetylornithine/acetyl-lysine aminotransferase Arg	99.43
d1sffa_	425	4-aminobutyrate aminotransferase, GABA-aminotransf	99.38
d2gsaa_	427	Glutamate-1-semialdehyde aminomutase (aminotransfe	99.36
d1z7da1	404	Ornithine aminotransferase {Plasmodium yoelii yoel	99.36
d2hoxa1	425	Alliinase {Garlic (Allium sativum) [TaxId: 4682]}	99.33
d1zoda1	431	Dialkylglycine decarboxylase {Pseudomonas cepacia	99.3
d1s0aa_	429	Adenosylmethionine-8-amino-7-oxononanoate aminotra	99.26
d1ohwa_	461	4-aminobutyrate aminotransferase, GABA-aminotransf	99.21

>d1js3a_ c.67.1.6 (A:) DOPA decarboxylase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: DOPA decarboxylase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=1e-88  Score=699.17  Aligned_cols=466  Identities=46%  Similarity=0.871  Sum_probs=428.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccC
Q 010842           17 LDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFF   96 (499)
Q Consensus        17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~   96 (499)
                      ||+|+||+.+++++|.+++|+++++++||.+..+|+++++.++..+|++|.+.+++++++.+.+.+++++|+||+|+||+
T Consensus         1 m~~~~fr~~~~~~~d~i~d~~~~~~~~~v~~~~~p~~l~~~~~~~~P~~g~~~~~~l~~~~~~i~~~~~~~~~P~f~~~~   80 (476)
T d1js3a_           1 MNASDFRRRGKEMVDYMADYLEGIEGRQVYPDVQPGYLRPLIPATAPQEPDTFEDILQDVEKIIMPGVTHWHSPYFFAYF   80 (476)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTGGGSCSSCCCCTTCSGGGSCSSCCSSCCCHHHHHHHHHHTTGGGCCCTTSTTBCSSS
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCChHHHHHhcCcccCcCCCCHHHHHHHHHHHHhCCCCCCCCCCeeEeC
Confidence            79999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCcccc--CCCccEEEcCChHHHHHHHHHHHH
Q 010842           97 PATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMF--SGTGGGVIQNTTSDSILVTLIAAR  174 (499)
Q Consensus        97 ~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~--~~~~~g~~t~ggt~A~~~al~~ar  174 (499)
                      +++++++++++++++..+|+|...|+.+|.++++|+++++||++++|+|+.+..  .+.++|++|+|||+||++|+++||
T Consensus        81 ~~~~~~~~~l~~~~~~~~n~n~~~~~~sp~~t~iE~~v~~wl~~l~g~p~~~~~~~~~~~~G~~~~Ggs~anl~al~~AR  160 (476)
T d1js3a_          81 PTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAAR  160 (476)
T ss_dssp             CCCCCHHHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHhhcccccchhhhhhHHHHHHHHHHHHHHHhCCCcccccCCCCCCCceECCcHHHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999986542  235789999999999999999999


Q ss_pred             HHHHhHhhhh--c------cCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCc
Q 010842          175 DRALDAVGAE--N------MHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV  246 (499)
Q Consensus       175 ~~~~~~~~~~--g------~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~  246 (499)
                      ++..++.+..  |      .+++++|+|+.+|+|+.|++.++|+   .++.||+|++  ++||+++|+++|++++++|..
T Consensus       161 ~~~~~~~~~~~~g~~~~~~~~~~vv~~s~~~H~Si~ka~~~lGl---~~~~v~~d~~--~~md~~~L~~~i~~~~~~g~~  235 (476)
T d1js3a_         161 TKVVRRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGV---KLKAIPSDGK--FAMRASALQEALERDKAAGLI  235 (476)
T ss_dssp             HHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTC---EEEEECCCTT--SCCCHHHHHHHHHHHHHTTCE
T ss_pred             HHHHHhhcccccCcccccccCceEEEecccccHHHHHHHHhcCc---eEEEeccCCC--CCcCHHHHHHHHHHHHhcCCC
Confidence            9877654321  1      2478999999999999999999999   7999999865  599999999999999999999


Q ss_pred             cEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEE
Q 010842          247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLW  326 (499)
Q Consensus       247 p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~  326 (499)
                      |++||+|+|||.+|++|||++|+++|++||+|+||||||||++.+++++++++.|+++|||+++|+|||+++|++||+++
T Consensus       236 p~~VvataGtt~~G~iDpl~~I~~i~~~~~~wlHVDAA~Gg~~~~~~~~~~~~~gi~~aDSit~d~HK~l~~P~~~g~~l  315 (476)
T d1js3a_         236 PFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMW  315 (476)
T ss_dssp             EEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred             cEEEeecCCCccceeeccHHHHHHHHHhcCcEEEEecccchhhhhhcchhhhhcCCcccceeeecCccccccCCcceeec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010842          327 VKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD  406 (499)
Q Consensus       327 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~  406 (499)
                      +|++..+...+...+.|+...........++.++++++||+++++++|++++.+|.+|+++++++..++++++++.|++.
T Consensus       316 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sr~~~al~lw~~l~~~G~~g~~~~i~~~~~lA~~l~~~l~~~  395 (476)
T d1js3a_         316 VKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQD  395 (476)
T ss_dssp             ESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred             ccchHHHHHHHhcChhhhccccccccccccccccccccchhhHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcC
Confidence            99998888888888889887665555667889999999999999999999999999999999999999999999999999


Q ss_pred             CCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842          407 PRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI  486 (499)
Q Consensus       407 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l  486 (499)
                      |+|+++.+|.+++||||+.+.        +.+++++.++|.++|.++++++.++|+.++|++++|+.||++||+.+++.|
T Consensus       396 ~~fel~~~p~l~iV~Fr~~~~--------d~~n~~l~~~l~~~G~~~~s~t~~~g~~~lR~~i~n~~Tt~~did~~~~~i  467 (476)
T d1js3a_         396 PRFEVCAEVTLGLVCFRLKGS--------DGLNEALLERINSARKIHLVPCRLRGQFVLRFAICSRKVESGHVRLAWEHI  467 (476)
T ss_dssp             TTEEECSCCCSSEEEEEESSC--------HHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHH
T ss_pred             CCeEEECCCceEEEEEEccCC--------hHHHHHHHHHHHhcCCEEEeeeeECCEEEEEEEeCCCCCCHHHHHHHHHHH
Confidence            999999999999999999774        678899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhc
Q 010842          487 MEGADRLFK  495 (499)
Q Consensus       487 ~~~~~~l~~  495 (499)
                      +++++++++
T Consensus       468 ~~~a~~lla  476 (476)
T d1js3a_         468 RGLAAELLA  476 (476)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhC
Confidence            999999863

>d1pmma_ c.67.1.6 (A:) Glutamate decarboxylase beta, GadB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Pyridoxal-dependent decarboxylase
domain: Glutamate decarboxylase beta, GadB
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.7e-56  Score=453.39  Aligned_cols=407  Identities=14%  Similarity=0.157  Sum_probs=329.8

Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHH
Q 010842           60 DSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLA  139 (499)
Q Consensus        60 ~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la  139 (499)
                      ..+|+++.+.+++.+.+.+.+.....+  +-.+..|+..  .++..+.+++..++|+|...++.+|.++++|.++++|++
T Consensus        28 ~~~p~~~~~~~~~~~~i~d~l~~dg~~--~~n~asf~~t--~~~~~~~~l~~~~~~~N~~~~~~~P~~~~lE~~~v~~la  103 (450)
T d1pmma_          28 KRFPLHEMRDDVAFQIINDELYLDGNA--RQNLATFCQT--WDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVA  103 (450)
T ss_dssp             SSCCCSCCCHHHHHHHHHHHGGGSCCG--GGBCSCCSCC--CCCHHHHHHHHHTTTCBTTCTTTSHHHHHHHHHHHHHHH
T ss_pred             ccCCccCCCHHHHHHHHHHHhccCCCc--cccccccccC--CCCHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHH
Confidence            368999999999999998865433211  1123334432  334567899999999999999999999999999999999


Q ss_pred             HHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc-CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEe
Q 010842          140 TMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM-HKLVVYGSDQTHSTFAKVCKLAGVSPANIRAL  218 (499)
Q Consensus       140 ~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~-~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v  218 (499)
                      +|+|+|...  .+.++|++|+|||+||++|++++|+++..+.+..|. ....++++..+|+|+.|+|+++|+   +++.|
T Consensus       104 ~L~~~p~~~--~~~~~G~~t~GgSeA~~~a~~aar~~~~~~~~~~g~~~~~~~~~~~~~H~s~~Kaa~~~gi---~~~~v  178 (450)
T d1pmma_         104 DLWHAPAPK--NGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDV---ELREI  178 (450)
T ss_dssp             HHTTCCCCT--TSCCSEEEESSHHHHHHHHHHHHHHHHHHHHHHHTCCCSCCEEEESSCCHHHHHHHHHTTC---EEEEC
T ss_pred             HHhCCCccc--cCCCcCeeeCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCceEEecccHHHHHHHHHHcCC---CceEe
Confidence            999998653  233578999999999999999999987766544443 244567788899999999999999   99999


Q ss_pred             eCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHH------HHhCCEEEeeccccchhc-c
Q 010842          219 PTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVA------NEYGIWVHVDAAYAGSAC-I  291 (499)
Q Consensus       219 ~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia------~~~~~~lhvD~A~g~~~~-~  291 (499)
                      |++++ +++||+++|+++|+++      +++|++++|+|.+|++||+++|+++|      +++|+|+||||||||+.+ +
T Consensus       179 ~~~~~-~~~~d~~~L~~~i~~~------t~~Vv~t~gtt~tG~~dpv~~i~~i~~~~~~a~~~~i~lHVDAA~gG~~~p~  251 (450)
T d1pmma_         179 PMRPG-QLFMDPKRMIEACDEN------TIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPF  251 (450)
T ss_dssp             CCBTT-BCSCCHHHHHHHCCTT------EEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHH
T ss_pred             eecCC-CCcCcHHHHHHHhhhC------ceEEEeeeeeccCCCccccchhhHHHHHHHHHhccCcEEEeehhhccceeee
Confidence            99864 4799999999998765      46999999999999999999999886      457999999999998765 3


Q ss_pred             CccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC-c
Q 010842          292 CPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK-S  370 (499)
Q Consensus       292 ~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-a  370 (499)
                      ++..+....+++++||+++|+|||+++|+|||++++|++..+...+...+.|+..         ++.+++++++|++. +
T Consensus       252 ~~~~~~~~~~~~~aDSi~~s~HK~~~~p~g~g~l~~r~~~~~~~~~~~~~~yl~~---------~~~~~~~~~sr~~~~~  322 (450)
T d1pmma_         252 VAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGG---------QIGTFAINFSRPAGQV  322 (450)
T ss_dssp             HCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEEEETTE---------EEEECCSCCSCBSHHH
T ss_pred             echhhhhhhcccceeEeecChhhccCCCCCeeEEEecChhhhhhhcccccCcCCC---------CcCCCcccCccchHHH
Confidence            4455566778999999999999999999999999999988766666667778753         23456889999875 5


Q ss_pred             HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC----CCceEEEEEecCCCCCCcchhHHHHHHHHHHH
Q 010842          371 LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP----RHFALVCFRLNPYPHSGSADTEMLNRKLLDWV  446 (499)
Q Consensus       371 l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l  446 (499)
                      +++|+.++.+|.+|+++++++..+++++|.+.|++.++++++.+    +.+++|||++.+... ..-.    ...+.++|
T Consensus       323 ~~~~~~l~~~G~~G~~~~~~~~~~la~~l~~~L~~~~~~el~~~~~p~~~l~~V~Fr~~~~~~-~~~~----~~~l~~~L  397 (450)
T d1pmma_         323 IAQYYEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGED-PGYT----LYDLSERL  397 (450)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCEEEEEECCTTTBSSEEEEEECTTCC-CSSC----HHHHHHHH
T ss_pred             HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeCCCCCCceEEEEEecCCccc-CCCC----HHHHHHHH
Confidence            68999999999999999999999999999999999999999852    557889999976421 1111    23466777


Q ss_pred             HhcCCEEEEe---eeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhccC
Q 010842          447 NSTGRVYLTH---TIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGS  497 (499)
Q Consensus       447 ~~~g~~~~~~---~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~~  497 (499)
                      .++|+.+.+.   ....+..++|++++ +.+|++++|++++.|+++++++.+.|
T Consensus       398 ~~~Gw~v~~~~~p~~~~~~~~lRvvv~-~~~t~e~~d~lv~dl~~~v~~l~~~p  450 (450)
T d1pmma_         398 RLRGWQVPAFTLGGEATDIVVMRIMCR-RGFEMDFAELLLEDYKASLKYLSDHP  450 (450)
T ss_dssp             HTTTCBCCEEECCTTCTTCEEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             HHcCCeeeccCcCCCcCCcEEEEEEcc-CCCCHHHHHHHHHHHHHHHHHHHhCc
Confidence            8889754332   23455678999995 88999999999999999999987764

>d3bc8a1 c.67.1.9 (A:23-467) Selenocysteinyl-tRNA synthase (SepSecS) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.2e-38  Score=320.59  Aligned_cols=389  Identities=11%  Similarity=0.028  Sum_probs=268.2

Q ss_pred             CCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcccCCcc-------------cccChh
Q 010842           60 DSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFN-------------WLASPA  126 (499)
Q Consensus        60 ~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~-------------~~~~p~  126 (499)
                      .++|++|.+.++|++.+.++...+.     +.|.++...+.......++++...+..+...             ...++.
T Consensus        17 ~~lP~~G~~~~~i~~~l~~~~~~d~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   91 (445)
T d3bc8a1          17 GKCPEDGWDESTLELFLHELAVMDS-----NNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAGSSL   91 (445)
T ss_dssp             CCCCSSCCCHHHHHHHHHHHHHTBG-----GGCTTCCCCSSCCCCCSCHHHHHHTTTCCSCBCC-------CCSBHHHHH
T ss_pred             CCCCcCCCCHHHHHHHHHHHHhccC-----CcccCcccccccCccccHHHHHHHHHhhccccccCcchhhhhhhhccchH
Confidence            4689999999999999887653332     2344433222222222223343333222111             122345


Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~  206 (499)
                      ...+|.++.+|+++++|++..      ..|++|+|||+++++++++++.+.       +.++.+|++|..+|+|+.+++.
T Consensus        92 ~~~le~~~~~~~~~l~g~~~~------~~~~~~~~~t~~~~~~~l~a~~~~-------~~~~~~vi~~~~~H~s~~~a~~  158 (445)
T d3bc8a1          92 LNKITNSLVLNVIKLAGVHSV------ASCFVVPMATGMSLTLCFLTLRHK-------RPKAKYIIWPRIDQKSCFKSMV  158 (445)
T ss_dssp             HHHHHHHHHHHHHHHHTCTTC------CEEEEESSCHHHHHHHHHHHHHHH-------CTTCCEEEEECCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCcc------cCccccccchHHHHHHHHHHHHHh-------CCCCCEEEEcCcccHHHHHHHH
Confidence            678999999999999999876      368899999976666655554433       2246789999999999999999


Q ss_pred             HhCCCCCCeEEeeCCC-CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842          207 LAGVSPANIRALPTSV-DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY  285 (499)
Q Consensus       207 ~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~  285 (499)
                      ++|+   .++.|++.. +.++++|+++|+++|++....  .+.+|++++|+|++|.++|+++|+++|++||+|+|||+||
T Consensus       159 ~~g~---~~~~v~~~~~~~~~~id~~~l~~~i~~~~~~--~~~~v~~~~~~~~~G~~~~~~~i~~~~~~~~~~l~vD~a~  233 (445)
T d3bc8a1         159 TAGF---EPVVIENVLEGDELRTDLKAVEAKIQELGPE--HILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAY  233 (445)
T ss_dssp             HTTC---EEEEECCEEETTEEECCHHHHHHHHHHHCGG--GEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTT
T ss_pred             HcCC---eeEEEEeeccCcccccCHHHHHHHHHhcccc--CeEEEEEeCCCCCCeeehhHHHHHHHHHHhCCcEEEEccc
Confidence            9999   777775421 234799999999999886443  3678999999999999999999999999999999999999


Q ss_pred             cchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCC
Q 010842          286 AGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTG  365 (499)
Q Consensus       286 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s  365 (499)
                      |++..++........++.++|++++++||++++|+|+|++++++...+.....   .|..                  .+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~vd~~~~s~hK~~~~p~g~~~l~~~~~~~~~~~~~---~~~~------------------~~  292 (445)
T d3bc8a1         234 GLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNEPFIQDISK---MYPG------------------RA  292 (445)
T ss_dssp             TTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEESCHHHHHHHHH---HSCS------------------CB
T ss_pred             hhhhhhccccchhccCcCCcceEEecCccccccCCCCceeeeCChHHHHHHHH---HHhh------------------cc
Confidence            98766555444444456679999999999999999999999998765532211   1110                  11


Q ss_pred             CCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEEcCCCc-eEEEEEecCCCCCCcchhHHHHHH
Q 010842          366 RRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP---RFEIVVPRHF-ALVCFRLNPYPHSGSADTEMLNRK  441 (499)
Q Consensus       366 r~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~---~~~~~~~~~~-~~v~f~~~~~~~~~~~~~~~~~~~  441 (499)
                      .....+.+|+++..+|.+++.+..++..++++++.+.|+++.   +..++..+.. ...++.+.............    
T Consensus       293 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~----  368 (445)
T d3bc8a1         293 SASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQ----  368 (445)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHH----
T ss_pred             cCcchHHHHHHHHHHhhhcchhhHHHHHHHHHHHHHHHHHHHhhcCceeecCCCCCcceEEEeeeccccCCCCHHH----
Confidence            122468899999999999999999999999999999887643   4444443332 23333333221112222333    


Q ss_pred             HHHHHHhcCC---EEEEee--------eEC---------CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhccC
Q 010842          442 LLDWVNSTGR---VYLTHT--------IVG---------GLYMLRFAVGASLTDERHVVAAWELIMEGADRLFKGS  497 (499)
Q Consensus       442 l~~~l~~~g~---~~~~~~--------~~~---------g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~~~  497 (499)
                      +...|.+.|+   .+..+.        .+.         ...++|++++ ..+|++|||+++++|+++.+++.+.+
T Consensus       369 l~~~L~~~gI~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~i~i~~~-~~~T~eDID~~v~~L~kilk~~rk~~  443 (445)
T d3bc8a1         369 LGSMLFTRQVSGARAVPLGNVQTVSGHTFRGFMSHADNYPCAYLNAAAA-IGMKMQDVDLFIKRLDKCLNIVRKEQ  443 (445)
T ss_dssp             HHHHHHHTTCCSCEEECSCCEEEETTEEEETTTTTSSCCSSCEEEEECC-TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCcceeeccccccchhhhhhhhcCCCCccCCCCeEEEeCc-CCCCHHHHHHHHHHHHHHHHHHHhhh
Confidence            3334444442   111100        010         1245898884 88999999999999999999987654

>d2z67a1 c.67.1.9 (A:1-434) Selenocysteinyl-tRNA synthase (SepSecS) {Methanococcus maripaludis [TaxId: 39152]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Methanococcus maripaludis [TaxId: 39152]

Probab=100.00  E-value=5.8e-37  Score=312.78  Aligned_cols=405  Identities=14%  Similarity=0.082  Sum_probs=287.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccc
Q 010842           13 QFKPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNF   92 (499)
Q Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~   92 (499)
                      +.+.|=++++++..+.+++...+.++++-+              .  ..+|++|.+..++.+.+.++...+...+....+
T Consensus         5 ~~~~~ip~~~~~~~~~~~~~~~~~~~~l~~--------------~--~~lP~~g~~~~~i~~~l~~l~~~~~~~~~~~~~   68 (434)
T d2z67a1           5 NIEGLIPKNMEKRGELVLNEYLKEIEDVFN--------------H--RKIPENGIDDEKIKLFLKFLSMMDTDKDPKSVR   68 (434)
T ss_dssp             CCCSSSCHHHHHHHHHHHHHHTHHHHHHHH--------------H--CSCCSSCCCHHHHHHHHHHHHTTBGGGCTTCEE
T ss_pred             hhhccCCccHHHHHHHHHHHHHHHHHHHHh--------------c--ccCCCCCCCHHHHHHHHHHHHhcCccccccccc
Confidence            445666688888888888888877666431              1  357889999999999998877666655555554


Q ss_pred             cccCCCCCChHHHHHHHH---HHHc------ccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH
Q 010842           93 FAFFPATVSTAGFLGEML---CACF------NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS  163 (499)
Q Consensus        93 ~~~~~~~~~~~~~~~~~l---~~~~------n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt  163 (499)
                      .|...... +...+....   ....      .++...-.++.....+|.+++.|+++++|.+.+       +..+.+||+
T Consensus        69 ~g~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~-------~~~~~~~t~  140 (434)
T d2z67a1          69 IGEREART-YSKIHEELSSGFCHGIGRSGNLVDPQPKASGASIMYALTNKILESFFKQLGLNVH-------AIATPISTG  140 (434)
T ss_dssp             CSSCCCCC-SCHHHHHHTTTCTTCBSBTTBTTSCCTTBHHHHHHHHHHHHHHHHHHHHTTCCCE-------EEEESSCHH
T ss_pred             ccceeccc-chhHHhhcccccccccccccchhhhhhhhhhhHHHHHHHHHHHHHHHHhcCCCcc-------eeecCcHHH
Confidence            44332222 122222211   1011      111111112345678999999999999999875       345555666


Q ss_pred             HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC-CCCCccCHHHHHHHHHHHHH
Q 010842          164 DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV-DANFSLSPQLLRRAVEADVE  242 (499)
Q Consensus       164 ~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~~i~~~~~  242 (499)
                      +++..++.+.|...         ++.+|++|...|+|+.|++.+.|+   .++.|++.. +.++.+|+++|+++|+++.+
T Consensus       141 ~~~~~~l~a~r~~~---------~~~~vi~s~~~H~s~~k~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~  208 (434)
T d2z67a1         141 MSISLCLSAARKKY---------GSNVVIYPYASHKSPIKAVSFVGM---NMRLVETVLDGDRVYVPVEDIENAIKKEIE  208 (434)
T ss_dssp             HHHHHHHHHHHHHH---------CCCEEEEECCCCHHHHHHHHHTTC---EEEEECCEEETTEEECCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhh---------cCceEEEeccCCHHHHHHHHHhCC---cceEEEeecCCCccCCCHHHHHHHHHhhhh
Confidence            66666666665432         567899999999999999999999   777665421 22469999999999999887


Q ss_pred             cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842          243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC  322 (499)
Q Consensus       243 ~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~  322 (499)
                      .+..+ +|+++.+++.+|.++|+++|+++|++||+|+|||+|||++...++..... .+..++|++++++||++++|.|+
T Consensus       209 ~~~~~-~v~~~~~~~~~g~~~~l~~i~~~~~~~~~~l~vD~a~g~~~~~~~~~~~~-~~~~~~D~~~~s~hK~l~~~~g~  286 (434)
T d2z67a1         209 LGNRP-CVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKK-AFKYRVDAVVSSSDKNLLTPIGG  286 (434)
T ss_dssp             TTCCE-EEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHH-HHTSCCSEEEEEHHHHHCCCSSC
T ss_pred             cCCce-EEEeccCcCCCccccCHHHHHHHHHHhCCeEEEeccchhhhhhccccccc-cccCCcceEEEcCccccccCCCc
Confidence            76555 79999999999999999999999999999999999998765444433222 23346999999999999999999


Q ss_pred             eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010842          323 CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGF  402 (499)
Q Consensus       323 g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~  402 (499)
                      |+++++++..+.+.....                     ..++....+..+|+++..+|.+|+++..++..++++++++.
T Consensus       287 ~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~a~l~~~~~~g~~~~~~~~~~~a~~l~~~  345 (434)
T d2z67a1         287 GLVYSTDAEFIKEISLSY---------------------PGRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDEL  345 (434)
T ss_dssp             EEEEESCHHHHHHHHTTS---------------------CSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccCcHHHHHHHHhhc---------------------ccccccchHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHH
Confidence            999999876554321111                     01122335788999999999999999999999999999999


Q ss_pred             HhcC---CCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCE---EEEeee--------ECCEEEEEEe
Q 010842          403 VKSD---PRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRV---YLTHTI--------VGGLYMLRFA  468 (499)
Q Consensus       403 L~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~--------~~g~~~lRi~  468 (499)
                      |+++   .++.++..+....+++.....           ..++...|.+.|+.   +..+..        .....++|++
T Consensus       346 L~~l~~~~g~~ll~~~~~~~~~~~~~~~-----------~~~l~~~L~~~gI~g~~v~~~l~~~g~~~~~~~~~~~l~~~  414 (434)
T d2z67a1         346 LNDLSKKTGGKFLDVESPIASCISVNSD-----------PVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIVMN  414 (434)
T ss_dssp             HHHHHHHSSCCBCCCCCSSEEEEECSSC-----------HHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEEEE
T ss_pred             HHHhhhhcCceecCCCCCceeeeecCCC-----------HHHHHHHHHHcCCeeeehhhhccccCeeeecccCCCeEEEe
Confidence            8874   366677666666666665442           34456666666631   111111        1124679999


Q ss_pred             ccCCCCcHHHHHHHHHHHHH
Q 010842          469 VGASLTDERHVVAAWELIME  488 (499)
Q Consensus       469 ~~~~~~t~~di~~l~~~l~~  488 (499)
                      ++ ..+|++|||+++++|++
T Consensus       415 ~s-~~~T~edID~~i~~L~k  433 (434)
T d2z67a1         415 AA-IGVRTEDIVNSVSKLEK  433 (434)
T ss_dssp             CC-TTCCHHHHHHHHHHHHT
T ss_pred             cC-CCCCHHHHHHHHHHHhc
Confidence            84 88999999999999986

>d1jf9a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=2.2e-28  Score=246.32  Aligned_cols=355  Identities=15%  Similarity=0.109  Sum_probs=243.1

Q ss_pred             cccccCCCCCChHHHHHHHHHHHc-----ccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHH
Q 010842           91 NFFAFFPATVSTAGFLGEMLCACF-----NSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDS  165 (499)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A  165 (499)
                      -||.+-.+++.+..+ .|.+..++     |++...+..+...++.-+++++.+++++|.....      ..++++++|+|
T Consensus        24 iYld~a~~~~~p~~v-~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~e~~R~~ia~~l~~~~~~------~i~~~~~~T~~   96 (405)
T d1jf9a_          24 AYLDSAASAQKPSQV-IDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAE------ELVFVRGTTEG   96 (405)
T ss_dssp             EECCTTTCCCCCHHH-HHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGG------GEEEESSHHHH
T ss_pred             EEEeCccccCCCHHH-HHHHHHHHHhccCCCccchhHHHHHHHHHHHHHHHHHHHHcCCCCcc------cccccCcHHHH
Confidence            477766555544444 33344332     2222222233334455567889999999975421      46899999999


Q ss_pred             HHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH----HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH
Q 010842          166 ILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF----AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV  241 (499)
Q Consensus       166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~----~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~  241 (499)
                      +...+........       .++..|+++...|.+.    ...++..|+   +++.+|+++++  .+|++.+++++.+++
T Consensus        97 ~~~~~~~~~~~~~-------~~g~~il~~~~e~~s~~~~~~~~a~~~g~---~v~~~~~~~~g--~~~~~~~~~~i~~~t  164 (405)
T d1jf9a_          97 INLVANSWGNSNV-------RAGDNIIISQMEHHANIVPWQMLCARVGA---ELRVIPLNPDG--TLQLETLPTLFDEKT  164 (405)
T ss_dssp             HHHHHHHHHHHHC-------CTTCEEEEETTCCGGGTHHHHHHHHHHTC---EEEEECBCTTS--CBCGGGHHHHCCTTE
T ss_pred             HHHHHhccccccc-------CCCCEEEEEeCcccchHHHHHHHHHHcCc---EEEEECCCCCC--cCCHHHHHHhccCCc
Confidence            8777665432221       1567899999999884    445566799   99999999766  999999999887765


Q ss_pred             HcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc
Q 010842          242 EAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD  321 (499)
Q Consensus       242 ~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~  321 (499)
                      +      +|++++.++.+|.+.|+++|+++||++|+++|||++++.+....+-..   .   .+|++++++|||+ +|.|
T Consensus       165 ~------lv~~~~v~~~tG~~~pi~~i~~~~~~~g~~~~vD~~q~~g~~~id~~~---~---~~D~~~~s~hK~~-Gp~G  231 (405)
T d1jf9a_         165 R------LLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQA---L---DCDFYVFSGHKLY-GPTG  231 (405)
T ss_dssp             E------EEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHH---H---TCSEEEEEGGGTT-SCSS
T ss_pred             E------EEEEecCCCcccccCchHHhhhHHHHcCCeeecccceeccccccchhh---c---CCceeeccccccc-cCCC
Confidence            4      899999999999999999999999999999999999988866543211   1   3999999999996 5999


Q ss_pred             ceEEEEeCchhHHHhhcCCccCCCCCCC------CCCCcccCCCcccCCCCCC-C-cHHHHHHHHHhcHHHHHHHHHHHH
Q 010842          322 CCCLWVKQPGLLVKALSTDPEYLKNKPS------ESNSVVDFKDWQVGTGRRF-K-SLRLWMVLRSYGVLNLQSHIRSDI  393 (499)
Q Consensus       322 ~g~l~~r~~~~l~~~~~~~~~yl~~~~~------~~~~~~~~~~~~~~~sr~~-~-al~~~~~l~~~g~~g~~~~~~~~~  393 (499)
                      +|++++++...     ...++.......      ............++.|.+. . .+.+..+++.+...|++.+.++..
T Consensus       232 ~g~l~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~  306 (405)
T d1jf9a_         232 IGILYVKEALL-----QEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQ  306 (405)
T ss_dssp             CEEEEECHHHH-----TTCCCSSCSSSSEEECCTTTCCEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             ceeeeechhhh-----cccCcccccccccCccccccccccccchhhhcCCCCcHHHHHHHHHHHHHHHHhChHHHHHHHH
Confidence            99999987431     111111111100      0000001111222333222 1 245566666666678888888999


Q ss_pred             HHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee--------ECCEEE
Q 010842          394 RLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI--------VGGLYM  464 (499)
Q Consensus       394 ~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--------~~g~~~  464 (499)
                      .+++++.+.++..+...+..+ ...++++|.++...          ...+...|.+.|+.+-++..        .+-.++
T Consensus       307 ~L~~~~~~~l~~~~~~~~~~~~~r~~ivsf~~~~~~----------~~~~~~~L~~~gI~v~~G~~c~~~~~~~~~~~g~  376 (405)
T d1jf9a_         307 NLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHH----------AYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAM  376 (405)
T ss_dssp             HHHHHHHHHHTTSTTEEEESCTTCCSEEEEEETTCC----------HHHHHHHHHHTTEECEEECTTCHHHHHHTTCSCE
T ss_pred             HHHHHHHhhhhcCCcccccCCcCcCcEEEEEcCCCC----------HHHHHHHHHHCCcEEEccchhhhhHHHhcCCCCE
Confidence            999999999999988877754 45788999886543          34566667677754322211        122467


Q ss_pred             EEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          465 LRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       465 lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +|+|+ ++++|++|||+++++|+++.+-+
T Consensus       377 iRiS~-~~ynt~eDid~l~~~l~~i~r~~  404 (405)
T d1jf9a_         377 CRASL-AMYNTHEEVDRLVTGLQRIHRLL  404 (405)
T ss_dssp             EEEEC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEC-CCCCCHHHHHHHHHHHHHHHHhc
Confidence            99999 59999999999999999988754

>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystine C-S lyase C-des
species: Synechocystis sp. [TaxId: 1143]

Probab=99.97  E-value=1.8e-29  Score=252.42  Aligned_cols=349  Identities=13%  Similarity=0.107  Sum_probs=232.3

Q ss_pred             cccccCCCCCChHHHHHHHHHHH----cccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHH
Q 010842           91 NFFAFFPATVSTAGFLGEMLCAC----FNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSI  166 (499)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~----~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~  166 (499)
                      .||.+-..++.+..+ .+.+...    .+.+...+..+.....+..++++.+++++|.+.+       ..++|+|+|+|+
T Consensus         9 ~yld~~~~~~~p~~v-~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~-------~i~~~~g~t~a~   80 (381)
T d1elua_           9 TYFNFGGQGILPTVA-LEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPN-------TITITDNVTTGC   80 (381)
T ss_dssp             EECCTTTCCCCCHHH-HHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGG-------GEEEESSHHHHH
T ss_pred             EEeeCCcccCCCHHH-HHHHHHHHHHhhcCCCccchhhHHHHHHHHHHHHHHHHHhCCCcc-------cEEEECChHHHh
Confidence            477766555444433 3333333    2233334445555667777888999999999765       468999999998


Q ss_pred             HHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH
Q 010842          167 LVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE  242 (499)
Q Consensus       167 ~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~  242 (499)
                      .+++.+.+.+          ++..|+++...|.++..+    ++..|+   .++.||.+.+.....+.+.|++.+.++  
T Consensus        81 ~~~~~~l~~~----------~g~~i~~~~~~~~s~~~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~l~~~i~~~--  145 (381)
T d1elua_          81 DIVLWGLDWH----------QGDEILLTDCEHPGIIAIVQAIAARFGI---TYRFFPVAATLNQGDAAAVLANHLGPK--  145 (381)
T ss_dssp             HHHHHHSCCC----------TTCEEEEETTCCHHHHHHHHHHHHHHCC---EEEEECCGGGSSSSCHHHHHHTTCCTT--
T ss_pred             hhcchhhhhc----------CCceEEEeccccceeeeccccccccccc---cccccccccccccchHHHHHHhhhccc--
Confidence            8877654321          567788899999876554    445688   999999875431222244555544433  


Q ss_pred             cCCccEEEEEecCCCcccccCChhHHHHHHHHh----CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccC
Q 010842          243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY----GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLS  318 (499)
Q Consensus       243 ~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~----~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~  318 (499)
                          +.+|++++++|+||.+.|+++|.++|+++    ++++|||++++.+....+-     . .-.+|++++++|||++.
T Consensus       146 ----t~~v~i~~~~n~tG~~~~~~~I~~l~~~~~~~~~~~~~vD~~~~~g~~~~~~-----~-~~~~D~~~~s~~K~~~~  215 (381)
T d1elua_         146 ----TRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDF-----S-RLEVDYYAFTGHKWFAG  215 (381)
T ss_dssp             ----EEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCT-----T-TSCCSEEEEESSSTTCC
T ss_pred             ----ccccccccccccccccchhhHHHHHHhhcccccccccccccccccccccccc-----c-ccccccccccccccccc
Confidence                45899999999999999999999999985    6999999999876543321     1 11499999999999999


Q ss_pred             CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc-----ccCCCcccCCCCCC--CcHHHHHHHHHhcHHHH-HHHHH
Q 010842          319 YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV-----VDFKDWQVGTGRRF--KSLRLWMVLRSYGVLNL-QSHIR  390 (499)
Q Consensus       319 p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~-----~~~~~~~~~~sr~~--~al~~~~~l~~~g~~g~-~~~~~  390 (499)
                      |.|+|++++++...  +.  ..+.+...........     .......+..+.+.  ..+.+..++..+...|. +.+.+
T Consensus       216 p~G~g~l~~~~~~~--~~--~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~~~~~a~~~~~~~g~~~~~~~  291 (381)
T d1elua_         216 PAGVGGLYIHGDCL--GE--INPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQ  291 (381)
T ss_dssp             CTTCEEEEECTTTG--GG--CCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHH
T ss_pred             cchhhHHHhhHHHH--Hh--cCcccccccccccccccccccccccccccccccccchhhhhhhhhhhhHHHhcccccchh
Confidence            99999999987643  11  1222221110000000     00000011111111  12344555555544543 55678


Q ss_pred             HHHHHHHHHHHHHhcCCCeEEEcC--CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEe
Q 010842          391 SDIRLAKMFEGFVKSDPRFEIVVP--RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFA  468 (499)
Q Consensus       391 ~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~  468 (499)
                      +..++++++.+.|+++|+++++.+  +..++++|.+.+..         ..+.+.+.|.++|+. +.  ...+.+++|+|
T Consensus       292 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~vsf~~~~~~---------~~~~i~~~L~~~gi~-v~--~~~~~~~lRis  359 (381)
T d1elua_         292 AICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSPL---------GHRAIVQKLEEQRIY-LR--TIADPDCIRAC  359 (381)
T ss_dssp             HHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECSSS---------CHHHHHHHHHHTTEE-CE--EETTTTEEEEE
T ss_pred             hhhhHHHHHHHHHhcCCCeEecCCCCccccEEEEEcCCCC---------CHHHHHHHHHhCCcE-EE--ecCCCCEEEEe
Confidence            889999999999999999999853  56789999886532         134567778888843 22  24445679999


Q ss_pred             ccCCCCcHHHHHHHHHHHHHH
Q 010842          469 VGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       469 ~~~~~~t~~di~~l~~~l~~~  489 (499)
                      + +..+|++|||+++++|+++
T Consensus       360 ~-~~~nt~edid~ll~~l~e~  379 (381)
T d1elua_         360 C-HYITDEEEINHLLARLADF  379 (381)
T ss_dssp             C-CTTCCHHHHHHHHHHHTTC
T ss_pred             c-CCCCCHHHHHHHHHHHHhh
Confidence            9 5889999999999999875

>d1t3ia_ c.67.1.3 (A:) Probable cysteine desulfurase SufS {Synechocystis sp. PCC 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Probable cysteine desulfurase SufS
species: Synechocystis sp. PCC 6803 [TaxId: 1148]

Probab=99.96  E-value=5.6e-28  Score=243.53  Aligned_cols=353  Identities=12%  Similarity=0.073  Sum_probs=243.6

Q ss_pred             cccccCCCCCChHHHHHHHHHHHc-c----cCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHH
Q 010842           91 NFFAFFPATVSTAGFLGEMLCACF-N----SVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDS  165 (499)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~~-n----~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A  165 (499)
                      -|+.+-..++.+..++ +.+..++ +    ++...+..+....++-+++++.+++++|.+...      ..++++++|++
T Consensus        24 iYld~a~~~~~p~~v~-~~~~~~~~~~~~n~~s~~~~~~~~~~~~~e~aR~~ia~llga~~~~------~i~~~~~tt~~   96 (408)
T d1t3ia_          24 VYLDNAATSQKPRAVL-EKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPR------EIVYTRNATEA   96 (408)
T ss_dssp             EECBTTTCCCCCHHHH-HHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGG------GEEEESSHHHH
T ss_pred             EEeeCccccCCCHHHH-HHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCcc------cEEeecchHHH
Confidence            4888877766555544 4343333 2    222233344444455566789999999997431      35888888888


Q ss_pred             HHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH
Q 010842          166 ILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV  241 (499)
Q Consensus       166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~  241 (499)
                      +...+........+       ++..|+++...|.+..    ..++..|.   .++.+|.+.++  ..+.+.|++++++++
T Consensus        97 ~n~~~~~~~~~~~~-------~g~~il~s~~e~~s~~~~~~~~~~~~g~---~v~~~~~~~~~--~~~~~~l~~~~~~~t  164 (408)
T d1t3ia_          97 INLVAYSWGMNNLK-------AGDEIITTVMEHHSNLVPWQMVAAKTGA---VLKFVQLDEQE--SFDLEHFKTLLSEKT  164 (408)
T ss_dssp             HHHHHHHTHHHHCC-------TTCEEEEETTCCGGGTHHHHHHHHHHCC---EEEEECBCTTS--SBCHHHHHHHCCTTE
T ss_pred             HHHHHhhccccccC-------CCCEEEeecccchhhhhhhhhhhhccCc---eEeeeeccccc--cccHHHhhhccCCCc
Confidence            76665543322111       4678999999998744    45566799   99999988655  889999999987765


Q ss_pred             HcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc
Q 010842          242 EAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD  321 (499)
Q Consensus       242 ~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~  321 (499)
                      +      +|++++.++.+|.+.|+++|+++|+++|+++||||+++.+....+-...      .+|.+++++|||+ +|.|
T Consensus       165 ~------lv~i~~~~~~tG~~~p~~~i~~~~~~~g~~~ivDa~q~~g~~~id~~~~------~~D~~~~s~hK~~-gp~G  231 (408)
T d1t3ia_         165 K------LVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLI------DCDWLVASGHKMC-APTG  231 (408)
T ss_dssp             E------EEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHH------TCSEEEEEGGGTT-SCTT
T ss_pred             e------EEEEecccccccccCcHHHHhhhhhccCceeeeccceeccccccccccc------CCceEEecccccc-CCCC
Confidence            4      8999999999999999999999999999999999999888765432111      3899999999995 6889


Q ss_pred             ceEEEEeCchhHHHhhcCCccCCCCCCCCC-----CCcccCCCcccCCCCCC-C-cHHHHHHHHHhcHHHHHHHHHHHHH
Q 010842          322 CCCLWVKQPGLLVKALSTDPEYLKNKPSES-----NSVVDFKDWQVGTGRRF-K-SLRLWMVLRSYGVLNLQSHIRSDIR  394 (499)
Q Consensus       322 ~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~-----~~~~~~~~~~~~~sr~~-~-al~~~~~l~~~g~~g~~~~~~~~~~  394 (499)
                      +|+++++++...     ..++++.+.....     ..........++.|.+. . ...+-.++..+...|.+++.++..+
T Consensus       232 ~g~l~v~~~~~~-----~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~Gt~~~~~~~~l~~al~~~~~~g~~~i~~~~~~  306 (408)
T d1t3ia_         232 IGFLYGKEEILE-----AMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVE  306 (408)
T ss_dssp             CEEEEECHHHHH-----HSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             ccccccchhhhh-----cCCceecCCcccccccccccccCCchhhhcCCcHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH
Confidence            999999986421     1233333221100     00001111223333322 1 2345556666666678888888999


Q ss_pred             HHHHHHHHHhcCCCeEEEcC-----CCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee---------EC
Q 010842          395 LAKMFEGFVKSDPRFEIVVP-----RHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI---------VG  460 (499)
Q Consensus       395 ~a~~l~~~L~~~~~~~~~~~-----~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---------~~  460 (499)
                      +++++.+.+++.|++.++.+     ...++++|.+....          ...+...|.+.|+. ++.+.         .+
T Consensus       307 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~iv~f~~~~~~----------~~~v~~~L~~~gI~-v~~G~~c~~~~~~~~~  375 (408)
T d1t3ia_         307 LTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGLH----------ASDVATMVDQDGIA-IRSGHHCTQPLHRLFD  375 (408)
T ss_dssp             HHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTBC----------HHHHHHHHHTTTEE-CBCSCTTCHHHHHHTT
T ss_pred             HHhHHhhhhccCccccccCCCccccCcceEEEEEeCCCC----------HHHHHHHHhhCCcE-EecCcccccHHHHhhc
Confidence            99999999999999988853     23578999887643          45667777777843 33211         12


Q ss_pred             CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          461 GLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       461 g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      ...++|+|+ ++++|++|||+++++|+++.+.
T Consensus       376 ~~g~vRiS~-~~ynt~~did~li~~L~~~~~~  406 (408)
T d1t3ia_         376 ASGSARASL-YFYNTKEEIDLFLQSLQATIRF  406 (408)
T ss_dssp             CCCCEEEEC-CTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCccEEEEC-CCCCCHHHHHHHHHHHHHHHHH
Confidence            346799999 5999999999999999998764

>d1p3wa_ c.67.1.3 (A:) Cysteine desulfurase IscS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cysteine desulfurase IscS
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=1.5e-26  Score=231.82  Aligned_cols=346  Identities=14%  Similarity=0.132  Sum_probs=229.0

Q ss_pred             ccccccCCCCCChHHHHHHHHHHHcccCC-------cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCCh
Q 010842           90 PNFFAFFPATVSTAGFLGEMLCACFNSVG-------FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTT  162 (499)
Q Consensus        90 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~-------~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~gg  162 (499)
                      |-|+.+--+++.++.++ +.+..++....       ..+..+..++++-.++++.+++++|.+.+       ..++|+|+
T Consensus         3 ~iYlD~aa~~p~~~~v~-ea~~~~~~~~~~~~np~~~~~~~~~~~~~~~~~~R~~iA~~lg~~~~-------~I~~~~~~   74 (391)
T d1p3wa_           3 PIYLDYSATTPVDPRVA-EKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-------EIVFTSGA   74 (391)
T ss_dssp             SEECBTTTCCCCCHHHH-HHHHTTTSTTSCCCCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG-------GEEEESSH
T ss_pred             eEEeeCccccCCCHHHH-HHHHHHHHhccccCCCchhhhHHHHHHHHHHHHHHHHHHHHcCCCCC-------cEEEECCH
Confidence            66888877777677665 55555543211       12222333455555678899999999875       46899999


Q ss_pred             HHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH---HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHH
Q 010842          163 SDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK---LAGVSPANIRALPTSVDANFSLSPQLLRRAVEA  239 (499)
Q Consensus       163 t~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~---~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~  239 (499)
                      |+++..++.+......+       ++..|++++..|.++....+   ..|+   +++.+|.+.++  .+|+++++++|++
T Consensus        75 t~~l~~~~~~~~~~~~~-------~gd~Vv~~~~~~~s~~~~~~~~~~~G~---~v~~v~~~~~~--~~d~~~~~~~i~~  142 (391)
T d1p3wa_          75 TESDNLAIKGAANFYQK-------KGKHIITSKTEHKAVLDTCRQLEREGF---EVTYLAPQRNG--IIDLKELEAAMRD  142 (391)
T ss_dssp             HHHHHHHHHHHHHHHGG-------GCCEEEEETTSCHHHHHHHHHHHHTTC---EEEEECCCTTS--CCCHHHHHHHCCT
T ss_pred             HHHHHHHHhhhhhhhcC-------CCCEEEEeccccchHHHHHHHHHHcCC---EEEEeCCCCCC--eEcHHHHHHhCCC
Confidence            99988777766543322       46789999999999766554   4588   99999998654  8999999999987


Q ss_pred             HHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC
Q 010842          240 DVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY  319 (499)
Q Consensus       240 ~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p  319 (499)
                      +|+      +|++++++|+||.+.|+++|+++||++|++++||++|+.+....+-.      -..+|++++++|||+ +|
T Consensus       143 ~T~------lv~is~~~n~tG~~~~~~~I~~~~~~~~~~~ivD~~~~~g~~~~d~~------~~~~D~~~~s~~k~~-g~  209 (391)
T d1p3wa_         143 DTI------LVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLS------QLKVDLMSFSGHKIY-GP  209 (391)
T ss_dssp             TEE------EEECCSBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTBTTBCCCTT------TSCCSEEEEESTTTT-SC
T ss_pred             CcE------EEEEECCCCCCeeECCHHHHHHHhccCCcEEEEeeccccCCccccch------hcccccccccccccc-CC
Confidence            664      89999999999999999999999999999999999998775443211      124899999999996 57


Q ss_pred             CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHH---hcHHHHHHHHHHHHHHH
Q 010842          320 LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRS---YGVLNLQSHIRSDIRLA  396 (499)
Q Consensus       320 ~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~---~g~~g~~~~~~~~~~~a  396 (499)
                      .++|+++++.+..     ....+...+...         ......+..  ....+.++..   ...+...+..++..+++
T Consensus       210 ~g~g~~~~~~~~~-----~~~~~~~~gg~~---------~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  273 (391)
T d1p3wa_         210 KGIGALYVRRKPR-----VRIEAQMHGGGH---------ERGMRSGTL--PVHQIVGMGEAYRIAKEEMATEMERLRGLR  273 (391)
T ss_dssp             SSCEEEEECBTTB-----CCCCCSSCSSCT---------TTTTSCSCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CceEEEEEecchh-----cccCCcccCCcc---------ccCcccCcc--hhhhhhhhhhhhhHHHHHhhHHHHHHHHHH
Confidence            7999999987532     111222111110         001111111  1122222211   12344556667788889


Q ss_pred             HHHHHHHhcCCCeEEEcCC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHH----hcCCEEEEeeeEC---------
Q 010842          397 KMFEGFVKSDPRFEIVVPR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVN----STGRVYLTHTIVG---------  460 (499)
Q Consensus       397 ~~l~~~L~~~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~----~~g~~~~~~~~~~---------  460 (499)
                      .++.+.|.++++..+....   ...+++|......          ...+...+.    +.|..+..+....         
T Consensus       274 ~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~l~~i~v~~G~~c~~~~~~~~~~l~~~g~  343 (391)
T d1p3wa_         274 NRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVE----------GESLIMALKDLAVSSGSACTSASLEPSYVLRALGL  343 (391)
T ss_dssp             HHHHHTTTTSTTEEECSCTTTSCTTEEEEEETTSC----------HHHHHHHTTTEECBCCCC------CCCHHHHHHTC
T ss_pred             HHHHHHHHhhcCeeecccccccCceEEEEEeCCCC----------hHHHHHHhCCCEEEccccccCCccchhHHHHHcCC
Confidence            9999999999877664321   2455666665432          223333332    2232222111100         


Q ss_pred             ----CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          461 ----GLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       461 ----g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                          ..+++|+|+ ++++|++|||+++++|+++++++.+
T Consensus       344 ~~~~~~g~iRiS~-~~~nt~edid~l~~~l~~~l~~lr~  381 (391)
T d1p3wa_         344 NDELAHSSIRFSL-GRFTTEEEIDYTIELVRKSIGRLRD  381 (391)
T ss_dssp             CHHHHHTEEEEEC-CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CccccCCEEEEec-CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence                124699999 5899999999999999999988754

>d2e7ja1 c.67.1.9 (A:8-371) Selenocysteinyl-tRNA synthase (SepSecS) {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SepSecS-like
domain: Selenocysteinyl-tRNA synthase (SepSecS)
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.95  E-value=1.8e-26  Score=228.76  Aligned_cols=302  Identities=13%  Similarity=0.126  Sum_probs=199.6

Q ss_pred             HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCC
Q 010842          134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPA  213 (499)
Q Consensus       134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~  213 (499)
                      +.+.+++++|.++.         ++|+|||+||+.++.+..+           ++..|+++..+|+|+..+++..|+   
T Consensus        52 ~~~~~A~~~g~e~~---------~~t~g~t~a~~~~~~al~~-----------~gd~Vi~~~~~h~s~~~~~~~~g~---  108 (364)
T d2e7ja1          52 IHNQLPKFLGCDVA---------RVTNGAREAKFAVMHSLAK-----------KDAWVVMDENCHYSSYVAAERAGL---  108 (364)
T ss_dssp             HHTHHHHHTTSSEE---------EEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHHHTTC---
T ss_pred             HHHHHHHHhCcCEE---------EEECcHHHHHHHHHHHHhC-----------CCcEEEeecccccccchHHHhccc---
Confidence            44448999998653         8999999999998887632           677899999999999999999999   


Q ss_pred             CeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCc
Q 010842          214 NIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICP  293 (499)
Q Consensus       214 ~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~  293 (499)
                      +++.||+++.+++.+|+++|+++|++.++.. .+.+|+.++++|++|.+.|+++|+++|++||+++|+|+||+.+.+..+
T Consensus       109 ~v~~v~~~~~~~~~i~~~~l~~~i~~~~k~~-~~~lv~i~~~~n~tG~~~~l~~I~~ia~~~~i~livD~a~~~g~~~~~  187 (364)
T d2e7ja1         109 NIALVPKTDYPDYAITPENFAQTIEETKKRG-EVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVS  187 (364)
T ss_dssp             EEEEECCCCTTTCCCCHHHHHHHHHHHTTTS-CEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCC
T ss_pred             eEEEeeeccccccccCHHHHHhhhhhhcccC-CceEEEeecCCCCCceeecchhheeccccccchhhccccchhhhhhhc
Confidence            9999999876678999999999999877543 455788899999999999999999999999999999999987654321


Q ss_pred             cchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHH
Q 010842          294 EFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRL  373 (499)
Q Consensus       294 ~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~  373 (499)
                       ....     .+|++++++||+++.|.++|+++.++... ...+.....|....            .....+.. .+...
T Consensus       188 -~~~~-----g~D~~~~S~~K~~~~~g~~g~l~~~~~~~-~~~~~~~~~~~~~~------------~~~~~~~~-~~~~~  247 (364)
T d2e7ja1         188 -LKEI-----GADFIVGSGHKSMAASGPIGVMGMKEEWA-EIVLRRSEKYKNKE------------VELLGCTA-RGATI  247 (364)
T ss_dssp             -HHHH-----TCSEEEEEHHHHSSCCSSCEEEEECTTTT-TTTTCBCSSCTTSB------------GGGTTCCC-CSHHH
T ss_pred             -cccc-----ccceeeeccccccCCCCCEEEEEECHHHH-HHHHhhccccCccc------------cccccccc-chhHH
Confidence             1111     38999999999999998899998876532 11111111111110            01111111 12222


Q ss_pred             HHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-CCceEEEEEecCCCCCCcchhHHHHH-------HHH
Q 010842          374 WMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-RHFALVCFRLNPYPHSGSADTEMLNR-------KLL  443 (499)
Q Consensus       374 ~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~-------~l~  443 (499)
                      +..+..+  ..+.+ +...+..++++++.+.|+++ ++..+.+ +....+.|...+.       ......       .+.
T Consensus       248 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~  318 (364)
T d2e7ja1         248 ITLMASFPHVRERI-KRWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAEV-------LYEISKKAKGGRFFLY  318 (364)
T ss_dssp             HHHHHHHHHHHHHG-GGHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECHH-------HHHHHHHSSSGGGHHH
T ss_pred             HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHc-CCeecCCCCCCcceEEEeccc-------hHHHHHHhhccchHHH
Confidence            2222221  11111 22344457788889999887 6776643 3222233332221       011111       123


Q ss_pred             HHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          444 DWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       444 ~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ..+...|...+.   ......+|++.  +.+|++||++++++|++++++.
T Consensus       319 ~~l~~~~~~~~~---~g~~~~~~~~~--~~~t~edid~~~~~l~ei~~~y  363 (364)
T d2e7ja1         319 RELKSRKIHGIK---PGLTRYFKLST--YGLSDEEVDYVLNAFKEIIEKY  363 (364)
T ss_dssp             HHHHHTTEECSC---TTCCSEEEEEC--TTCCHHHHHHHHHHHHHHHHHC
T ss_pred             HHHHhcCCceec---CCCcceEEEec--cCCCHHHHHHHHHHHHHHHHHh
Confidence            334444522111   11123466653  5579999999999999998764

>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=5.6e-25  Score=219.99  Aligned_cols=352  Identities=12%  Similarity=0.047  Sum_probs=230.7

Q ss_pred             ccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHH
Q 010842           90 PNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVT  169 (499)
Q Consensus        90 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~a  169 (499)
                      |+.+-+.|++...+..+-+.+.    ....++ .++...++.+++.+.+++++|.++.+      ..+||+|||+|+..+
T Consensus        18 ~~~~l~~pGP~~~~~~Vl~am~----~~~i~H-Rs~~f~~i~~ea~~~l~~llg~~~~~------~ii~~gsgT~a~~~~   86 (388)
T d1h0ca_          18 PNQLLLGPGPSNLPPRIMAAGG----LQMIGS-MSKDMYQIMDEIKEGIQYVFQTRNPL------TLVISGSGHCALEAA   86 (388)
T ss_dssp             CCCEECSSSCCCCCHHHHHHHT----CCCCCT-TSHHHHHHHHHHHHHHHHHHTCCCSE------EEEESSCHHHHHHHH
T ss_pred             CcCccccCCCCCCCHHHHHHhC----cCCCCC-CCHHHHHHHHHHHHHHHHHhCCCCCc------EEEEcCcHHHHHHHH
Confidence            4555577777665554433322    222222 46778889999999999999998753      368899999998877


Q ss_pred             HHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH--HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCcc
Q 010842          170 LIAARDRALDAVGAENMHKLVVYGSDQTHSTFA--KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVP  247 (499)
Q Consensus       170 l~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~--ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p  247 (499)
                      +.....           ++..+++....|++..  ..+...+.   .+..++.+..+  ..|.+.+++.+....     +
T Consensus        87 i~~l~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~  145 (388)
T d1h0ca_          87 LVNVLE-----------PGDSFLVGANGIWGQRAVDIGERIGA---RVHPMTKDPGG--HYTLQEVEEGLAQHK-----P  145 (388)
T ss_dssp             HHHHCC-----------SSCCEEECBSSHHHHHHHHHHHHHC-----CBCCBCCTTC--CCCHHHHHHHHHHHC-----C
T ss_pred             HHHhhc-----------cCCceeeecccceeeeeccccccccc---cccccccCCcc--ccchHHHHHHhccCC-----c
Confidence            775532           4455666667777643  34455666   66777766544  889999988876643     3


Q ss_pred             EEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEE
Q 010842          248 LFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWV  327 (499)
Q Consensus       248 ~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~  327 (499)
                      .+|++++.+|.+|.+.|+++|+++|+++|+++|||++++.+....+-.     . -.+|.+++++|||++.|.|+|++++
T Consensus       146 ~~v~~~~~~n~tG~i~pi~~i~~~~~~~g~~~~vD~~qs~g~~~~d~~-----~-~~~D~~~~s~~K~~~gp~g~~~~~~  219 (388)
T d1h0ca_         146 VLLFLTHGESSTGVLQPLDGFGELCHRYKCLLLVDSVASLGGTPLYMD-----R-QGIDILYSGSQKALNAPPGTSLISF  219 (388)
T ss_dssp             SEEEEESEETTTTEECCCTTHHHHHHTTTCEEEEECTTTTTTSCCCTT-----T-TTCSEEEEESSSTTCCCTTCEEEEE
T ss_pred             ceEEEeeeeeccccccCHHHHHHHhhcccccceecccccccccccccc-----c-cccceecccccccccCCCceEEEee
Confidence            489999999999999999999999999999999999998775543211     1 1489999999999999999999998


Q ss_pred             eCchhHHHhhcCC----ccCCCCCCCCCCCcccCC----CcccCCCCCC-C-cHHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 010842          328 KQPGLLVKALSTD----PEYLKNKPSESNSVVDFK----DWQVGTGRRF-K-SLRLWMVLRSYGVLNLQSHIRSDIRLAK  397 (499)
Q Consensus       328 r~~~~l~~~~~~~----~~yl~~~~~~~~~~~~~~----~~~~~~sr~~-~-al~~~~~l~~~g~~g~~~~~~~~~~~a~  397 (499)
                      +.... .......    ..|+...     ...++.    ......+... . ...+..++..+...|++.+.++..++++
T Consensus       220 ~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~t~~~~~~~~~~~al~~~~~~g~~~~~~~~~~l~~  293 (388)
T d1h0ca_         220 SDKAK-KKMYSRKTKPFSFYLDIK-----WLANFWGCDDQPRMYHHTIPVISLYSLRESLALIAEQGLENSWRQHREAAA  293 (388)
T ss_dssp             CHHHH-HHHTTCSSCCSCSTTCHH-----HHHHHTTCSSSCCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred             cHHHH-Hhhhhccccccccccccc-----hhhhhhhhccccccccccccHHHHHHHHHHHHHHHHhccccccccccchhH
Confidence            87532 1211111    1111100     000000    0000111111 1 1234455555666778888899999999


Q ss_pred             HHHHHHhcCCCeEEEc-CC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee--eECCEEEEEEeccC
Q 010842          398 MFEGFVKSDPRFEIVV-PR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT--IVGGLYMLRFAVGA  471 (499)
Q Consensus       398 ~l~~~L~~~~~~~~~~-~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~~g~~~lRi~~~~  471 (499)
                      ++++.+... ++.++. ++   ...+++|.++..-         ...++.+.|.++..+.+..+  ...+ ..+|++.++
T Consensus       294 ~l~~~~~~~-g~~~~~~~~~~rs~~i~~~~~p~~~---------~~~~~~~~L~~~~gI~v~~G~~~~~~-~~iRis~~g  362 (388)
T d1h0ca_         294 YLHGRLQAL-GLQLFVKDPALRLPTVTTVAVPAGY---------DWRDIVSYVIDHFDIEIMGGLGPSTG-KVLRIGLLG  362 (388)
T ss_dssp             HHHHHHHHH-TCCBSSCSGGGBCTTEEEEECCTTC---------CHHHHHHHHHHHHCEECEECCGGGTT-TEEEEECCG
T ss_pred             HHHHHHhhc-CcccccCCHHHcCCeEEEEECCCCC---------CHHHHHHHHHhcCCEEEeCCchhhcC-CEEEEeCCC
Confidence            999999887 444432 22   2356788874311         13456666655422333322  2233 369999545


Q ss_pred             CCCcHHHHHHHHHHHHHHHHHHhcc
Q 010842          472 SLTDERHVVAAWELIMEGADRLFKG  496 (499)
Q Consensus       472 ~~~t~~di~~l~~~l~~~~~~l~~~  496 (499)
                      +.+|++|||+++++|+++.+++.++
T Consensus       363 ~~~t~edid~li~aL~~~L~~l~k~  387 (388)
T d1h0ca_         363 CNATRENVDRVTEALRAALQHCPKK  387 (388)
T ss_dssp             GGCSHHHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHhccc
Confidence            8899999999999999999988664

>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Kynureninase
species: Pseudomonas fluorescens [TaxId: 294]

Probab=99.93  E-value=2.4e-24  Score=216.53  Aligned_cols=318  Identities=15%  Similarity=0.057  Sum_probs=201.9

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      .++.+++++.+++++|.+++       ..++|+++|+++...+..+.......    + ++..+++++..|++.......
T Consensus        69 ~~~~e~~R~~iA~llga~~~-------ei~~~~~~T~~~~~~~~~~~~~~~~~----~-~~~~vi~~~~~~~~~~~~~~~  136 (404)
T d1qz9a_          69 RDLSERLGNRLATLIGARDG-------EVVVTDTTSINLFKVLSAALRVQATR----S-PERRVIVTETSNFPTDLYIAE  136 (404)
T ss_dssp             GGHHHHHHHHHHTTTTCCTT-------SEEECSCHHHHHHHHHHHHHHHHHHH----S-TTCCEEEEETTSCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCC-------cEEEecCchHHHHHHhhhhhhhhccc----C-CCcEEEEeccccchHHHHHHh
Confidence            35566788999999999875       46999999999877665443221111    1 344455666677665444433


Q ss_pred             hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842          208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG  287 (499)
Q Consensus       208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~  287 (499)
                      .+.   ++..++.+.++  ..+++.++++|+++++      +|++++.++.+|.+.|+++|+++|+++|+++|||++++.
T Consensus       137 ~~~---~~~~~~~~~~~--~~~~~~~~~~i~~~T~------lV~i~~v~~~tG~~~pv~~i~~~~~~~~~~~~vD~~q~~  205 (404)
T d1qz9a_         137 GLA---DMLQQGYTLRL--VDSPEELPQAIDQDTA------VVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSA  205 (404)
T ss_dssp             HHH---HHHCSSCEEEE--ESSGGGHHHHCSTTEE------EEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTT
T ss_pred             hhh---eeeeeceeccc--cccchhHHHhcCCCce------EEEEecccccccceecHHHHhccccccccceeEEeeccc
Confidence            333   33344444333  6788899998877664      899999999999999999999999999999999999988


Q ss_pred             hhccCccchhhhcCCCCCceeEecccccccCCCc-ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccC----CCccc
Q 010842          288 SACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDF----KDWQV  362 (499)
Q Consensus       288 ~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~----~~~~~  362 (499)
                      +....+-..      ..+|.+++++|||++.|.+ +|+++.++.. + ..+...................+    .....
T Consensus       206 g~~~~~~~~------~~~d~~~~s~~K~~~~~~g~~g~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (404)
T d1qz9a_         206 GAVPVDLHQ------AGADYAIGCTYKYLNGGPGSQAFVWVSPQL-C-DLVPQPLSGWFGHSRQFAMEPRYEPSNGIARY  277 (404)
T ss_dssp             TTSCCCHHH------HTCSEEEECSSSTTCCCTTCCCEEEECTTT-T-TTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGG
T ss_pred             ccccccccc------ccceEEEEechhhcccCCceEEEEEechhh-h-hhCCccccccCCccccccccccccccccchhh
Confidence            765442111      1389999999999976655 5666665532 1 11111111111100000000000    00001


Q ss_pred             CCCCCC-C-cHHHHHHHHH---hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC----CceEEEEEecCCCCCCcc
Q 010842          363 GTGRRF-K-SLRLWMVLRS---YGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR----HFALVCFRLNPYPHSGSA  433 (499)
Q Consensus       363 ~~sr~~-~-al~~~~~l~~---~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~----~~~~v~f~~~~~~~~~~~  433 (499)
                      +.+... . ...+...+..   .|.+.+++...........+.+.+...++++++.+.    ..++++|....       
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~l~~~~~~~~~~~i~~p~~~~~r~~~vsf~~~~-------  350 (404)
T d1qz9a_         278 LCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPE-------  350 (404)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTT-------
T ss_pred             hhhhccchhHHHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHhhccCCCEEEECCCCccceeeEEEEecCC-------
Confidence            111111 1 1222233333   455666666666666667777777788999998653    35788887753       


Q ss_pred             hhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          434 DTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       434 ~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                           ..++.+.|.++|++.    ......++|+|+++.++|++||++++++|+++.++
T Consensus       351 -----~~~v~~~L~~~gi~~----~~r~~~~lRiS~~h~ynt~~did~~~~~L~~vl~~  400 (404)
T d1qz9a_         351 -----GYAVIQALIDRGVIG----DYREPRIMRFGFTPLYTTFTEVWDAVQILGEILDR  400 (404)
T ss_dssp             -----HHHHHHHHHTTTEEC----EEETTTEEEEECCTTTCCHHHHHHHHHHHHHHHHH
T ss_pred             -----HHHHHHHHHHCCCEE----eecCCCeEEEECCCCCCCHHHHHHHHHHHHHHHHh
Confidence                 456778888888432    12223579999975579999999999999998764

>d1eg5a_ c.67.1.3 (A:) NifS-like protein/selenocysteine lyase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: NifS-like protein/selenocysteine lyase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.93  E-value=2.2e-23  Score=207.46  Aligned_cols=341  Identities=13%  Similarity=0.080  Sum_probs=217.5

Q ss_pred             ccccCCCCCChHHHHHHHHHHHcc-cCC---cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHH
Q 010842           92 FFAFFPATVSTAGFLGEMLCACFN-SVG---FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSIL  167 (499)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~~n-~~~---~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~  167 (499)
                      |+.+--+++.++.++ +.+..++. .+.   ..+..+....++-.++++.+++++|.+++       ..++++|+|+++.
T Consensus         4 yld~a~~~~~p~~v~-ea~~~~~~~~~~np~~~~~~~~~~~~~~~~aR~~ia~l~~~~~~-------~i~~~~~~T~~l~   75 (376)
T d1eg5a_           4 YFDNNATTRVDDRVL-EEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPS-------EIFFTSCATESIN   75 (376)
T ss_dssp             ECBTTTCCCCCHHHH-HHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGG-------GEEEESCHHHHHH
T ss_pred             EEECcccccCCHHHH-HHHHHHHHHcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCC-------cEEEECCHHHHHH
Confidence            555544445555544 44444442 111   11222333445555678899999999765       4699999999987


Q ss_pred             HHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH---HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842          168 VTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC---KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG  244 (499)
Q Consensus       168 ~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~---~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g  244 (499)
                      .++........       .++.+++++...|.+.....   +..|+   +++.||+++++  ++|+++++++|+++++  
T Consensus        76 ~~~~~~~~~~~-------~~g~~v~~~~~~~~~~~~~~~~~~~~g~---~v~~vp~~~~~--~id~~~l~~~i~~~t~--  141 (376)
T d1eg5a_          76 WILKTVAETFE-------KRKRTIITTPIEHKAVLETMKYLSMKGF---KVKYVPVDSRG--VVKLEELEKLVDEDTF--  141 (376)
T ss_dssp             HHHHHHHHHTT-------TTCCEEEECTTSCHHHHHHHHHHHHTTC---EEEECCBCTTS--CBCHHHHHHHCCTTEE--
T ss_pred             hhhhccccccc-------ccCcccccccccchhhHHHHHHHHhcCC---EEEEEcCCCCC--eECHHHHHHhcCCCce--
Confidence            77665432211       14556777777777755444   44588   99999998754  9999999999977654  


Q ss_pred             CccEEEEEecCCCcccccCChhHHHHHHHHh--CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842          245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEY--GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC  322 (499)
Q Consensus       245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~--~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~  322 (499)
                          +|++++.++.+|.+.|+++|.++++.+  ++.++||++++.+....+-..      ..+|++++++|||+ +|.|+
T Consensus       142 ----lv~is~v~~~tG~~~~~~~i~~~~~~~~~~~~~~vD~~q~~g~~~~d~~~------~~~D~~~~s~~K~~-gp~G~  210 (376)
T d1eg5a_         142 ----LVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEK------LEVDYASFSAHKFH-GPKGV  210 (376)
T ss_dssp             ----EEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTT------TCCSEEEEEGGGGT-SCTTC
T ss_pred             ----EEEEECCccccceeeeehhhhhhhhhcccCceeEEEeeeccccccccccc------cCccceecccceee-cCCCc
Confidence                899999999999999999999999776  899999999988765443111      13899999999995 68999


Q ss_pred             eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 010842          323 CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEG  401 (499)
Q Consensus       323 g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~  401 (499)
                      |++++++...      ..+.+......          .....+... .+........................+..++.+
T Consensus       211 ~~l~~~~~~~------~~p~~~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (376)
T d1eg5a_         211 GITYIRKGVP------IRPLIHGGGQE----------RGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVS  274 (376)
T ss_dssp             EEEEECTTSC------CCCSBCSSCTT----------TTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred             eeEEeccCcc------cCCcccCCCCc----------ccccCCcccchhhhhHHHHhhccccchhhhhhhhhhhhhhhcc
Confidence            9999987532      22222211110          001111111 111111222222233445556666677788888


Q ss_pred             HHhcCCCeEEEc--CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee-----eE--------CC-----
Q 010842          402 FVKSDPRFEIVV--PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT-----IV--------GG-----  461 (499)
Q Consensus       402 ~L~~~~~~~~~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-----~~--------~g-----  461 (499)
                      .|.......+..  .....++.+.+....          ...+...|.+.|+.+-++.     ..        .|     
T Consensus       275 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~L~~~gI~vr~G~~c~~~~~~~~~~l~~~gi~~~~  344 (376)
T d1eg5a_         275 GLMNLGAHIITPLEISLPNTLSVSFPNIR----------GSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDRRI  344 (376)
T ss_dssp             HHHTTTCEECSCTTSBCTTEEEEECTTCC----------HHHHHHHHHHTTEECBC------------CHHHHTTCCHHH
T ss_pred             ccccccccccccccccccceeeeccCCCC----------HHHHHHHHhhCCeEEeCcchhcCCccchhHHHHHcCCCccc
Confidence            888764433322  234456777776543          3455555666674321111     00        01     


Q ss_pred             -EEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          462 -LYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       462 -~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                       .+++|+|+ +.++|++|||+++++|++++.-
T Consensus       345 ~~~~iRiS~-~~ynt~edid~l~~~L~~iv~~  375 (376)
T d1eg5a_         345 AQGAIRISL-CKYNTEEEVDYFLKKIEEILSF  375 (376)
T ss_dssp             HHHEEEEEC-CTTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEec-CCCCCHHHHHHHHHHHHHHHhh
Confidence             24699998 5899999999999999998763

>d1wyua1 c.67.1.7 (A:1-437) Glycine dehydrogenase (decarboxylating) subunit 1 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase (decarboxylating) subunit 1
species: Thermus thermophilus [TaxId: 274]

Probab=99.91  E-value=4.6e-22  Score=197.66  Aligned_cols=402  Identities=14%  Similarity=0.098  Sum_probs=259.2

Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccc
Q 010842           15 KPLDAQEFRKQAHQMVDFIADYYQNIESYPVLTQVEPGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFA   94 (499)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~   94 (499)
                      -|-+.++.++.++.+=      .+++++  .+..+ |++++ +-+.++| ++.++.++++++.++..+|..-  ...|+|
T Consensus         4 ~p~s~~d~~~mL~~iG------~~s~~d--l~~~I-P~~~~-~~~~~lp-~~~sE~e~~r~~~~ls~kN~~~--~~~fig   70 (437)
T d1wyua1           4 TPHTEEEIREMLRRVG------AASLED--LFAHL-PKEIL-SPPIDLP-EPLPEWKVLEELRRLAAQNLPA--HKAFLG   70 (437)
T ss_dssp             CCCCHHHHHHHHHHHT------CSSTGG--GGTTS-CGGGS-SCCCCCC-CCCCHHHHHHHHHHHHHTSCCC--TTCCCC
T ss_pred             CCcCHHHHHHHHHHcC------CCCHHH--HHHhc-cHHHh-cCCCCCC-CCCCHHHHHHHHHHHHhCCCCc--CccccC
Confidence            3556666665444331      112222  23444 66674 3356777 4579999999999988777422  224666


Q ss_pred             cCCCCCChHHHHHHHHH--HHcccCC-cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHH
Q 010842           95 FFPATVSTAGFLGEMLC--ACFNSVG-FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLI  171 (499)
Q Consensus        95 ~~~~~~~~~~~~~~~l~--~~~n~~~-~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~  171 (499)
                      --.+.--.|+.+.+++.  .+++.+. ..-+.+.+.-++-.+...|++++.|++...        .-...|..|...|+.
T Consensus        71 ~G~~~~~~p~~i~~~~~~~~~~t~ytPyqpE~sQG~Lq~l~e~q~~l~eltGmd~~n--------~s~~~ga~a~~~~~~  142 (437)
T d1wyua1          71 GGVRSHHVPPVVQALAARGEFLTAYTPYQPEVSQGVLQATFEYQTMIAELAGLEIAN--------ASMYDGATALAEGVL  142 (437)
T ss_dssp             SSCCCCCCCHHHHHHHTSHHHHHCCSCCSGGGCHHHHHHHHHHHHHHHHHHTSSEEC--------SCBSSHHHHHHHHHH
T ss_pred             cccCCceeCHHHHHHHhChhhhhhCCCcchHHHHHHHHHHHHHHHHHHHhhCCCccc--------cCchHHHHHHHHHHH
Confidence            44444555666655442  2333321 122455666666667779999999998652        333456667788888


Q ss_pred             HHHHHHHhHhhhhccCCeEEEcCCCCchhHH----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCcc
Q 010842          172 AARDRALDAVGAENMHKLVVYGSDQTHSTFA----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVP  247 (499)
Q Consensus       172 ~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p  247 (499)
                      +++...         .+-.++++...|.+..    ..+...|+   +++.+|.+..   ..+.++    +.+      ..
T Consensus       143 ~~~~~~---------~~~~~~v~~~~~p~~~~v~~t~a~~~g~---~vv~v~~~~~---~~~~~~----~~~------~~  197 (437)
T d1wyua1         143 LALRET---------GRMGVLVSQGVHPEYRAVLRAYLEAVGA---KLLTLPLEGG---RTPLPE----VGE------EV  197 (437)
T ss_dssp             HHHHHH---------TCCEEEEETTSCHHHHHHHHHHHHHTTC---EEEEECCBTT---BCCCCC----CCT------TE
T ss_pred             HHHhhh---------cccccccccccChHHhhhhhhhccccee---eEEeeecccc---cchhhh----hcc------ce
Confidence            877643         2334667888887643    34667899   9999998753   333322    222      34


Q ss_pred             EEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc-----c
Q 010842          248 LFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD-----C  322 (499)
Q Consensus       248 ~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-----~  322 (499)
                      ++|+++.|+| .|.++++++|++++|+.|..+++|+.--+...+.+. ..     -++|.++.+ ||.++.|.+     .
T Consensus       198 Aavmi~~Pnt-~G~~ed~~~i~~~~h~~G~l~~~~ad~~al~~l~~P-g~-----~GaDi~~g~-~q~fg~p~g~GGP~~  269 (437)
T d1wyua1         198 GAVVVQNPNF-LGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPP-GA-----YGADIAVGD-GQSLGLPMGFGGPHF  269 (437)
T ss_dssp             EEEEEESSCT-TSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCH-HH-----HTCSEEEEE-CTTTTCCCGGGCSCC
T ss_pred             eEEEEccccc-cccccchHHHHHHhhhccceEEeeechhhhhccccc-cc-----cccceEeec-cceeccccCCCcCcc
Confidence            5888999877 799999999999999999988888654222222111 11     149999999 666666654     5


Q ss_pred             eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC------C----cccCCCCCC-----CcHHHHHHHHHhcHHHHHH
Q 010842          323 CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK------D----WQVGTGRRF-----KSLRLWMVLRSYGVLNLQS  387 (499)
Q Consensus       323 g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~------~----~~~~~sr~~-----~al~~~~~l~~~g~~g~~~  387 (499)
                      |++.++++-     ....|..+.+...+..+...+.      +    .....++-+     -++..|+.+..+|.+|+++
T Consensus       270 G~~a~~~~l-----~r~lPgrivg~s~d~~G~~~~~l~lqtreqhIrRekatsnict~q~l~a~~a~~Y~~~lG~~GL~~  344 (437)
T d1wyua1         270 GFLATKKAF-----VRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLRE  344 (437)
T ss_dssp             EEEEECGGG-----GGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccchh-----hccccccccccccccCCcccceeecccccccccccccccchhhHHHHHHHHHHHHhhhcCcccHHH
Confidence            889988742     2334555543322222222111      0    000111111     2467788889999999999


Q ss_pred             HHHHHHHHHHHHHHHHhcCCCeEEEc-CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee---ECCEE
Q 010842          388 HIRSDIRLAKMFEGFVKSDPRFEIVV-PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI---VGGLY  463 (499)
Q Consensus       388 ~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~  463 (499)
                      ..++...+|+|+.++|.++++++++. .+.+..+++.+...           ...+.++|.+.|.  ..++.   +.+..
T Consensus       345 ia~~a~~~A~yl~~~L~~~~g~~~~~~~~~f~ef~v~~~~~-----------~~~i~k~L~d~G~--~~~~~~~~~~~~~  411 (437)
T d1wyua1         345 VALKSVEMAHKLHALLLEVPGVRPFTPKPFFNEFALALPKD-----------PEAVRRALAERGF--HGATPVPREYGEN  411 (437)
T ss_dssp             HHHHHHHHHHHHHHHHTTSTTCEECSCSSBCSEEEEECSSC-----------HHHHHHHHHHTTC--CCCEECCTTSCSS
T ss_pred             HHHHHHHHHHHHHHHhhhcCCeeccCCCCeeeEEEEECCCC-----------HHHHHHHHHhCCC--CCCcccccCCCCC
Confidence            99999999999999999999998764 35667777765432           4567778888884  33332   23446


Q ss_pred             EEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          464 MLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       464 ~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      .+.++++ ...|++|||+++++|+++
T Consensus       412 ~lli~~T-E~~tkeeiD~~v~al~ei  436 (437)
T d1wyua1         412 LALFAAT-ELHEEEDLLALREALKEV  436 (437)
T ss_dssp             EEEEECC-TTCCHHHHHHHHHHHHHH
T ss_pred             eEEEecC-CCCCHHHHHHHHHHHHHh
Confidence            7899996 899999999999999886

>d1j32a_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Phormidium lapideum [TaxId: 32060]

Probab=99.90  E-value=6.1e-23  Score=204.98  Aligned_cols=333  Identities=16%  Similarity=0.113  Sum_probs=232.0

Q ss_pred             HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      |..+.+.+...+......|....+..++.+++.+|+.+..|.+-..     ...++|+|+++|+..++.+..+       
T Consensus        45 p~~v~~a~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~-----~~i~it~G~~~al~~~~~~~~~-------  112 (388)
T d1j32a_          45 PKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGA-----DNILVTNGGKQSIFNLMLAMIE-------  112 (388)
T ss_dssp             CHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCC-------
T ss_pred             CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcccCCCC-----ceEEEcCCHHHHHHHHHHHHhC-------
Confidence            3445666766666555667777888899999999999998875331     2568899999998887765532       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|+++.+++..+...++..|.   .++.++.+.+++|.+|+++|++++++.+      .+++.+.++||||.+
T Consensus       113 ----~gd~Vlv~~P~y~~~~~~~~~~~~---~~v~~~~~~~~~~~~d~~~l~~~~~~~~------~~~~~~~P~NPTG~~  179 (388)
T d1j32a_         113 ----PGDEVIIPAPFWVSYPEMVKLAEG---TPVILPTTVETQFKVSPEQIRQAITPKT------KLLVFNTPSNPTGMV  179 (388)
T ss_dssp             ----TTCEEEEESSCCTHHHHHHHHTTC---EEEEECCCGGGTTCCCHHHHHHHCCTTE------EEEEEESSCTTTCCC
T ss_pred             ----CCCEEEEcCCCcHHHHHHHHHhcC---eEEEEecccccccCCCHHHHHHhCCCCC------eEEEECCCCCCCCcc
Confidence                577899999999999999999999   8999998876678999999999886533      378888999999999


Q ss_pred             ---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCC---CCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842          263 ---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIE---RVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK  335 (499)
Q Consensus       263 ---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~---~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~  335 (499)
                         +.+++|+++|+++|+++++|.+|+......+.+........   .-..+..+..|.++.| .-+|+++..+. .. +
T Consensus       180 ~~~~~~~~l~~~~~~~~~~iI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~GlRvG~~~~~~~-~~-~  257 (388)
T d1j32a_         180 YTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAGPVP-LV-K  257 (388)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEECCHH-HH-H
T ss_pred             cchhhhhhhhcccccCCeEEEchhhhhcccccCCCCCCHHHhCcccccceeEecCChhhhhcchhHeEEEEECHH-HH-H
Confidence               44778888899999999999999766543333222211110   1235677889998765 56898876443 22 2


Q ss_pred             hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                      .+.....+...                    .......+++...+  +.+.+++..++..+..+.+.+.|++.+++++. 
T Consensus       258 ~~~~~~~~~~~--------------------~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~-  316 (388)
T d1j32a_         258 AATKIQGHSTS--------------------NVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAMPGLECP-  316 (388)
T ss_dssp             HHHHHHHTTTC--------------------SCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTCTTCBCC-
T ss_pred             HHHHhhhhccc--------------------cccHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCEec-
Confidence            22111111110                    01123333333332  55778888888899999999999999888865 


Q ss_pred             CCCceEEEE-EecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          414 PRHFALVCF-RLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       414 ~~~~~~v~f-~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      +|+.+.+.| .+....        ....++.++|. +.|+.+..+..+.+..++|++++   ++++++++.+++|+++.+
T Consensus       317 ~p~gg~~l~~~l~~~~--------~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~Rls~~---~~~e~l~~al~rl~~~l~  385 (388)
T d1j32a_         317 KPDGAFYMFPSIAKTG--------RSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYA---TDLDTIKRGMERLEKFLH  385 (388)
T ss_dssp             CCCBTTEECCBCGGGT--------CCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECC---SCHHHHHHHHHHHHHHHH
T ss_pred             CCCceEEEEEECCCCC--------CCHHHHHHHHHHhCCEEEEeccccCCCCeEEEEEe---CCHHHHHHHHHHHHHHHH
Confidence            455444433 343211        01234555554 45766666666766789999986   578999999999999988


Q ss_pred             HHh
Q 010842          492 RLF  494 (499)
Q Consensus       492 ~l~  494 (499)
                      .|+
T Consensus       386 ~l~  388 (388)
T d1j32a_         386 GIL  388 (388)
T ss_dssp             HHC
T ss_pred             HhC
Confidence            763

>d1c4ka2 c.67.1.5 (A:108-569) Ornithine decarboxylase major domain {Lactobacillus sp., strain 30a [TaxId: 1591]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Ornithine decarboxylase major domain
domain: Ornithine decarboxylase major domain
species: Lactobacillus sp., strain 30a [TaxId: 1591]

Probab=99.90  E-value=3.8e-22  Score=203.91  Aligned_cols=332  Identities=10%  Similarity=-0.040  Sum_probs=196.9

Q ss_pred             hhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHH
Q 010842          125 PASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKV  204 (499)
Q Consensus       125 p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka  204 (499)
                      ....+.|+.    +++++|.+..         +|+++||+++..|+..+.-          .++..|++++.+|.|+.++
T Consensus        66 ~~i~eae~~----~A~~~ga~~a---------~f~~~Gtt~~n~a~i~a~~----------~~gd~Vi~~~~~H~Sv~~~  122 (462)
T d1c4ka2          66 GPAVAAEKH----AARVYNADKT---------YFVLGGSSNANNTVTSALV----------SNGDLVLFDRNNHKSVYNS  122 (462)
T ss_dssp             THHHHHHHH----HHHHTTCSEE---------EEESSHHHHHHHHHHHHHC----------CTTCEEEEETTCCHHHHHH
T ss_pred             HHHHHHHHH----HHHHhCCCeE---------EEECCchHHHHHHHHHHhc----------CCCCeEEecccchHHHHHH
Confidence            334555555    9999998765         7777776655555444422          1688999999999999998


Q ss_pred             HHHhCCCCCCeEEeeCCCCCC------CccCHHHHHHHHHH---HHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh
Q 010842          205 CKLAGVSPANIRALPTSVDAN------FSLSPQLLRRAVEA---DVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY  275 (499)
Q Consensus       205 ~~~~G~g~~~v~~v~~~~~~~------~~~d~~~L~~~i~~---~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~  275 (499)
                      +..++...-.+..+++++.+.      ..++.+.+++.+.+   .......+..+++...+|..|.+.|+++|+++|++|
T Consensus       123 ~~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~G~~~dl~~I~~ia~~~  202 (462)
T d1c4ka2         123 ALAMAGGRPVYLQTNRNPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLGTYDGTIYNAHEVVKRIGHL  202 (462)
T ss_dssp             HTTTTCCEEEEECEEECTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESBCTTSEEECHHHHHHHHGGG
T ss_pred             HHHHhcCCceeeecccccccccCCCChHHhhHHHHHhhhhhhcHHhhhccCCceeEEEEeeeeccchhhHHHHHHHHHHc
Confidence            877644211333344444321      13455555544321   223344455667777778899999999999999999


Q ss_pred             CCEEEeeccccchhccCccchhhhc--C-----CCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCC
Q 010842          276 GIWVHVDAAYAGSACICPEFRHYLN--G-----IERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKP  348 (499)
Q Consensus       276 ~~~lhvD~A~g~~~~~~~~~~~~~~--g-----~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~  348 (499)
                      |+++|||+||+.+..+.+.++....  +     ...+|++++++||+++.+.+++++.+++....     ....+.....
T Consensus       203 g~~l~vD~A~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~~S~HK~lg~~~~g~ll~~~~~~~~-----~~~~~~~~~~  277 (462)
T d1c4ka2         203 CDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQTSQIHKKDSHIK-----GQLRYCDHKH  277 (462)
T ss_dssp             BSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTTCEEEEEECGGGT-----TSTTCCCHHH
T ss_pred             CCEEEEechhhccccccCcCCcchhhccccccccCCccEEEEecCcccccccceEEEEecccccc-----ccchhhhHHH
Confidence            9999999999998877765543221  1     12369999999999999888888888774321     1111110000


Q ss_pred             CCCCCcccCCCcccCCCCCCC--cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC----------
Q 010842          349 SESNSVVDFKDWQVGTGRRFK--SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH----------  416 (499)
Q Consensus       349 ~~~~~~~~~~~~~~~~sr~~~--al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~----------  416 (499)
                            ........+.+.+..  ...+-++...+..+..++++++..++++++++++++++++.....+.          
T Consensus       278 ------~~~~~~~~~t~sp~~~~~asl~~a~~~~~~~~g~~l~~~~~~~a~~~r~~l~~~~~~~~~~~~~~v~~~~~~~~  351 (462)
T d1c4ka2         278 ------FNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPFVPPVVNGKKWEDG  351 (462)
T ss_dssp             ------HHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEESSCSEETTEEGGGS
T ss_pred             ------HHHhhhhcccCCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccccccccccc
Confidence                  000000011111111  12233344445556667888899999999999998876543221100          


Q ss_pred             ----------------------------------ceEEEEEecCCCCC-Cc-chhHHHHHHHHHHHHhcCCEEEEeeeEC
Q 010842          417 ----------------------------------FALVCFRLNPYPHS-GS-ADTEMLNRKLLDWVNSTGRVYLTHTIVG  460 (499)
Q Consensus       417 ----------------------------------~~~v~f~~~~~~~~-~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~  460 (499)
                                                        ..-+.+........ .. .........+.+.|.+.|+. +   ...
T Consensus       352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~k~~l~~~gi~~~~g~~~~~G~~~~~~~~~L~~~gI~-~---e~~  427 (462)
T d1c4ka2         352 DTEDMANNIDYWRFEKGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYLRDHGII-P---EKS  427 (462)
T ss_dssp             CHHHHTTCGGGGBCCTTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHHHHTTCC-C---SEE
T ss_pred             chHhhhcccchhccCCcchhccccccCccceecccceeEEecCCccccccchhhcCCcHHHHHHHHHHcCCe-e---ecc
Confidence                                              00012211110000 00 00000123445556566742 1   122


Q ss_pred             CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          461 GLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       461 g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      +...+|+++ ++.+|++|||+++++|+++.+.+-+
T Consensus       428 ~~~~i~~~~-s~~~T~edid~li~aL~ei~r~~~~  461 (462)
T d1c4ka2         428 DLNSILFLM-TPAETPAKMNNLITQLLQLQRLIEE  461 (462)
T ss_dssp             CSSEEEEEC-CTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             CCCeEEEEe-cCCCCHHHHHHHHHHHHHHHHHHhc
Confidence            445699998 5999999999999999999876543

>d1v72a1 c.67.1.1 (A:6-350) Phenylserine aldolase PSALD {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Phenylserine aldolase PSALD
species: Pseudomonas putida [TaxId: 303]

Probab=99.90  E-value=4.5e-23  Score=200.83  Aligned_cols=324  Identities=12%  Similarity=0.033  Sum_probs=208.5

Q ss_pred             hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      .|.++..+ ..+.......|...|    ..+++.+++++++|.+.+        .+||+|||+||..++.+++.      
T Consensus        16 ~P~v~~A~-~~a~~~~~~~~~~~~----~~~~l~~~la~~~g~~~~--------v~f~~sGt~An~~a~~~~~~------   76 (345)
T d1v72a1          16 SPEVAQAL-VKHSSGQAGPYGTDE----LTAQVKRKFCEIFERDVE--------VFLVPTGTAANALCLSAMTP------   76 (345)
T ss_dssp             CHHHHHHH-HHTTSSCCCSTTCSH----HHHHHHHHHHHHHTSCCE--------EEEESCHHHHHHHHHHTSCC------
T ss_pred             CHHHHHHH-HHHhccCccccCCCH----HHHHHHHHHHHHHCCCcE--------EEECCchHHHHHHHHHHHHh------
Confidence            56665544 333222234454444    455566669999998754        48999999999999987754      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEec-CCCccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATV-GTTSTT  260 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~-gtt~~G  260 (499)
                           .+..+++....|.++...+...+.+...+..++.+.+  +.++++.+++.+.+.......|..++.+. ..+..|
T Consensus        77 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (345)
T d1v72a1          77 -----PWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGPA--AKLDIVRLRERTREKVGDVHTTQPACVSITQATEVG  149 (345)
T ss_dssp             -----TTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCGG--GCCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCTTS
T ss_pred             -----cCCccccccccceeeechhhHHHhcCccccccccccc--ccccHHHhhhhhcccccccccccceeeeeecccccc
Confidence                 3556677888899877665544433336777665543  48999999999987655433343222222 223333


Q ss_pred             c---cCChhHHHHHHHHhCCEEEeeccccchhccCccchh-hhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHh
Q 010842          261 A---VDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH-YLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKA  336 (499)
Q Consensus       261 ~---id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~-~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~  336 (499)
                      .   ++++++++++|++||+++|+|++++++......... ........+.++..++|.+...  .+.............
T Consensus       150 ~~~~~~~~~~i~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  227 (345)
T d1v72a1         150 SIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLA--AEAIVLFNTSLATEM  227 (345)
T ss_dssp             CCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGGTCSS--CEEEEESSGGGHHHH
T ss_pred             ccccchhhhhHHHHHHhcCceeeecccccceeccccccCHHHhhccccccccccCcccccccc--ccccccchhhhhhhc
Confidence            3   477888999999999999999999776443221111 0111122456666666655433  344444333222111


Q ss_pred             hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC
Q 010842          337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH  416 (499)
Q Consensus       337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~  416 (499)
                      ....   .                ....+....+...+.....+......+...+..++++++.+.+.++|++++..++.
T Consensus       228 ~~~~---~----------------~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~p~~  288 (345)
T d1v72a1         228 SYRR---K----------------RAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGLGGVEVLGGTE  288 (345)
T ss_dssp             HHHH---H----------------HTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEESCCC
T ss_pred             cccc---c----------------ccccccchhhHHhhhhHHHHHHhhhhhhccchhhHHHHHHHHHHhcCCcEeccCCC
Confidence            1000   0                00112222345556666777777788888888999999999999999999988888


Q ss_pred             ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      .++++++...              .+.++|.++|..+.  +...+...+|+++ ++.+|+||||+++++|+++
T Consensus       289 ~niv~~~~~~--------------~~~~~L~~~gi~v~--~~~~~~~~lR~~~-~~~~T~edid~~le~lr~a  344 (345)
T d1v72a1         289 ANILFCRLDS--------------AMIDALLKAGFGFY--HDRWGPNVVRFVT-SFATTAEDVDHLLNQVRLA  344 (345)
T ss_dssp             SSEEEEEECH--------------HHHHHHHHTTCBCB--CSSSSTTEEEEEC-CTTCCHHHHHHHHHHHHHT
T ss_pred             ccEEEEEcCH--------------HHHHHHHHcCCCcc--ccCCCCCEEEEEC-CCCCCHHHHHHHHHHHHHh
Confidence            8888887632              35667778886542  2223567899998 5999999999999999875

>d1wyub1 c.67.1.7 (B:2-472) Glycine dehydrogenase subunit 2 (P-protein) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Glycine dehydrogenase subunits (GDC-P)
domain: Glycine dehydrogenase subunit 2 (P-protein)
species: Thermus thermophilus [TaxId: 274]

Probab=99.90  E-value=6.2e-22  Score=199.28  Aligned_cols=393  Identities=13%  Similarity=0.044  Sum_probs=249.2

Q ss_pred             hhHHHhcCCCCCCCCCCCHHHHHHHHHhhhcCCCCCCCCccccccC--CCCCChHHHHHHHHHHHcccCCc-ccccChhh
Q 010842           51 PGFLRSALPDSAPHRPESFETILKDVQEKIIPGITHWLSPNFFAFF--PATVSTAGFLGEMLCACFNSVGF-NWLASPAS  127 (499)
Q Consensus        51 ~~~l~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~~~~~l~~~~n~~~~-~~~~~p~~  127 (499)
                      |++++..-+..||+  .++.++++++.++..+|.....+..++|..  .-.|.....+..++ .++.+++. ..+++...
T Consensus        30 P~~~~~~~~l~LP~--~sE~El~r~~~~la~kN~~~~~~~~~lG~~~~hy~P~v~~~~~~~~-TaYTPYQPaEiSQG~LQ  106 (471)
T d1wyub1          30 PKEHLREVPPRLPE--VDELTLVRHYTGLSRRQVGVDTTFYPLGSCTMKYNPKLHEEAARLF-ADLHPYQDPRTAQGALR  106 (471)
T ss_dssp             CGGGBCSSCCCCCC--CCHHHHHHHHHHHHTTCCCTTTSCCCBTTTCCCCCCHHHHHHHHTT-SSCCTTSCGGGCHHHHH
T ss_pred             CHHHHcCCCCCCCC--CCHHHHHHHHHHHHhCCCCccccccCCccccCccCcchhhhHHHHH-hccCCCCCHHHHHHHHH
Confidence            56666666678883  899999999999998887554566666722  11222223333332 23456663 56666777


Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      ..+|.+  .++++|+|++-.       +..+..|+| |...|+.+++.....+.  .......++++...|.........
T Consensus       107 alfEfQ--tmi~eLTGMdva-------NaS~yDGat-A~aeA~~ma~r~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~  174 (471)
T d1wyub1         107 LMWELG--EYLKALTGMDAI-------TLEPAAGAH-GELTGILIIRAYHEDRG--EGRTRRVVLVPDSAHGSNPATASM  174 (471)
T ss_dssp             HHHHHH--HHHHHHHTCSEE-------ECCCSSHHH-HHHHHHHHHHHHHHHTT--CTTTCCEEEEETTSCTHHHHHHHH
T ss_pred             HHHHHH--HHHHHHhCCCcc-------ccccchHHH-HHHHHHHHHHHHhhhcc--cccccccccCCcccccceeeeeec
Confidence            777777  669999999864       224444444 55566666554322210  011234455566666677777777


Q ss_pred             hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842          208 AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAG  287 (499)
Q Consensus       208 ~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~  287 (499)
                      .+.   .++.++.+..+  ..|.+.++..+.+++      ..++++.+++.-+..++++++++++++.+..+++|++-..
T Consensus       175 ~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~------a~v~v~~p~~~g~~e~~~~~~~~~~h~~g~~~~~~~~~~~  243 (471)
T d1wyub1         175 AGY---QVREIPSGPEG--EVDLEALKRELGPHV------AALMLTNPNTLGLFERRILEISRLCKEAGVQLYYDGANLN  243 (471)
T ss_dssp             TTC---EEEEECBCTTS--SBCHHHHHHHCSTTE------EEEEECSSCTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGG
T ss_pred             ccc---eeecccccccc--cccchhhhhhhhccc------cceeeccCCCcccccchhhhhHHHHHhccccccccccchh
Confidence            777   88888877544  889999988765543      4677777776544445699999999999999999987543


Q ss_pred             hhccCccchhhhcCCCCCceeEecccccccCC-----CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCccc
Q 010842          288 SACICPEFRHYLNGIERVDSFSFSPHKWLLSY-----LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQV  362 (499)
Q Consensus       288 ~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-----~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~  362 (499)
                      ..........     ..+|.++++.|+.++.|     .++|++.++++-  .   ...|..+.............++..+
T Consensus       244 ~~~~l~~p~~-----~g~div~vg~~q~~G~P~~~GGP~~G~~a~~~~~--~---R~~PGRiV~~~~~~~~~~~~REqhI  313 (471)
T d1wyub1         244 AIMGWARPGD-----MGFDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHL--A---PYLPVPLVERGEEGFYLDFDRPKSI  313 (471)
T ss_dssp             GTTTTCCHHH-----HTCSEEECCTTTTTCCCCTTSCCCCCCEEECGGG--G---GGCCSCEEEECSSCEEEECCCTTCC
T ss_pred             hhhhccccCc-----ccccccccccccccccccccccccccceeehhhh--h---ccCCCceecCCCccccccCCCcccc
Confidence            3221111111     13899999999988776     346777777642  1   2333333322111000000011111


Q ss_pred             C----CCCC-CCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CCCceEEEEEecCCCCCCcchhH
Q 010842          363 G----TGRR-FKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PRHFALVCFRLNPYPHSGSADTE  436 (499)
Q Consensus       363 ~----~sr~-~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~  436 (499)
                      .    |+.. ..++..++.+..+|.+|+++..+++..+|+|++++|+. +|+++.. .|.++.+.+.....-     .  
T Consensus       314 rRe~actnqaL~al~A~vYlsllG~~GL~elA~~~~~~A~Yla~~L~~-~G~~~~~~~~ff~EFvv~~~~~~-----~--  385 (471)
T d1wyub1         314 GRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYLKELLKE-KGYRVPYDGPSMHEFVAQPPEGF-----R--  385 (471)
T ss_dssp             CCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCBCSSCSSCCSCEEEBCSTTC-----C--
T ss_pred             cchhhhhhhHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHhh-cCceeccCcceeeEEeecCCCCC-----C--
Confidence            0    1111 12456777888899999999999999999999999976 7998754 356677766553211     0  


Q ss_pred             HHHHHHHHHHHhcCCEEEEeeeE---CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          437 MLNRKLLDWVNSTGRVYLTHTIV---GGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       437 ~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                        ...+.++|.+.|.  ..++.+   .++..+-+|++ ..+|++|||+++++|+++.++
T Consensus       386 --~~~i~k~L~~~G~--~~~~~~~p~~~~~~llv~vT-E~~tkedID~lv~aL~~i~~e  439 (471)
T d1wyub1         386 --ALDLAKGLLELGF--HPPTVYFPLIVKEALMVEPT-ETEAKETLEAFAEAMGALLKK  439 (471)
T ss_dssp             --HHHHHHHHHHTTC--CCCEESCSTTSTTCEEECCC-TTSCHHHHHHHHHHHHHHHTS
T ss_pred             --HHHHHHHHHHcCC--CCCcccCcCCCCCeEEEecC-CCCCHHHHHHHHHHHHHHHHh
Confidence              2446666777785  233221   23456888996 999999999999999998874

>d1fc4a_ c.67.1.4 (A:) 2-amino-3-ketobutyrate CoA ligase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 2-amino-3-ketobutyrate CoA ligase
species: Escherichia coli [TaxId: 562]

Probab=99.89  E-value=9.9e-22  Score=196.19  Aligned_cols=299  Identities=15%  Similarity=0.110  Sum_probs=211.6

Q ss_pred             hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHH
Q 010842          126 ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVC  205 (499)
Q Consensus       126 ~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~  205 (499)
                      ...++|++    +++++|.+..         +++++|++||..++.+...           ++..|++....|.|+..++
T Consensus        91 ~~~~lE~~----lA~~~g~e~a---------l~~~SG~~An~~~i~~l~~-----------~~d~i~~d~~~h~s~~~G~  146 (401)
T d1fc4a_          91 SHKELEQK----LAAFLGMEDA---------ILYSSCFDANGGLFETLLG-----------AEDAIISDALNHASIIDGV  146 (401)
T ss_dssp             HHHHHHHH----HHHHHTCSEE---------EEESCHHHHHHTTHHHHCC-----------TTCEEEEETTCCHHHHHHH
T ss_pred             HHHHHHHH----HHHhhcCCce---------EEecchhhhhHHHHHHhcC-----------CCcEEEeCCcchHHHHccc
Confidence            33455555    8999998764         9999999999988876532           5778999999999999999


Q ss_pred             HHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccc
Q 010842          206 KLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAY  285 (499)
Q Consensus       206 ~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~  285 (499)
                      ...+.   ++..++       ..|++++++.++...+.+....+|++....+..|.+.||++|.++|++||+++++|+||
T Consensus       147 ~~~~a---~~~~~~-------~~d~~~le~~~~~~~~~~~~~~liv~egv~s~~G~~~~L~~l~~L~~~~~a~LivDeah  216 (401)
T d1fc4a_         147 RLCKA---KRYRYA-------NNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSH  216 (401)
T ss_dssp             HTSCS---EEEEEC-------TTCHHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTT
T ss_pred             cccCc---eEEEEc-------CCChHHHHHHHHHhhhcccCceEEEEcCCCCCCCchhhhhHHHHHHhhcCcEEEehhhh
Confidence            98888   777765       34889999998887776666666777776677899999999999999999999999999


Q ss_pred             cchhccCccch---hhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhh-cCCccCCCCCCCCCCCcccCCCcc
Q 010842          286 AGSACICPEFR---HYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL-STDPEYLKNKPSESNSVVDFKDWQ  361 (499)
Q Consensus       286 g~~~~~~~~~~---~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~  361 (499)
                      +++.+-. ..+   ........+|.++.+..|.++++. .|++. .+.+.. +.+ ...++|++..              
T Consensus       217 ~~g~~g~-~G~G~~~~~~~~~~~dii~~tl~Ka~gg~~-Gg~v~-g~~~~~-~~l~~~~~~~~~s~--------------  278 (401)
T d1fc4a_         217 AVGFVGE-NGRGSHEYCDVMGRVDIITGTLGKALGGAS-GGYTA-ARKEVV-EWLRQRSRPYLFSN--------------  278 (401)
T ss_dssp             TTTTSST-TSCCHHHHTTCTTCCSEEEEESSSTTCSSS-CEEEE-ECHHHH-HHHHHHCHHHHHSC--------------
T ss_pred             ccccccC-CCCccchhccCCCCCeEEEeecccccccCC-ccccc-CCHHHH-HHHHcCChhhhhcC--------------
Confidence            8875432 111   112223468999999999996543 34444 343332 222 2234444332              


Q ss_pred             cCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHH
Q 010842          362 VGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNR  440 (499)
Q Consensus       362 ~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~  440 (499)
                           +..+..+.+++..+- .....++.++..++.+++++.+... ++.+. .+..+++.+.+..         .....
T Consensus       279 -----~l~p~~~~aa~~~l~~~~~~~~~~~~l~~~~~~~~~~l~~~-g~~~~-~~~~pIv~v~~~~---------~~~a~  342 (401)
T d1fc4a_         279 -----SLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAA-GFTLA-GADHAIIPVMLGD---------AVVAQ  342 (401)
T ss_dssp             -----CCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHT-TCCBC-CSSSSEEEEEEEC---------HHHHH
T ss_pred             -----CCCHHHHHHHHhhhcccccCHHHHHHHHHHHHHHHhhhccc-CCccC-CCCCCEEEEEECC---------HHHHH
Confidence                 112222233332221 1334567788899999999999887 55544 4456777665543         34466


Q ss_pred             HHHHHHHhcCCEEE---EeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          441 KLLDWVNSTGRVYL---THTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       441 ~l~~~l~~~g~~~~---~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      .+.++|.++|+.+.   .|+...+...+|+++ +..+|++|||+++++|+++.+++
T Consensus       343 ~~~~~L~~~Gi~v~~i~~PtVp~g~~~lRi~~-~a~hT~edId~~v~al~ev~~~l  397 (401)
T d1fc4a_         343 KFARELQKEGIYVTGFFYPVVPKGQARIRTQM-SAAHTPEQITRAVEAFTRIGKQL  397 (401)
T ss_dssp             HHHHHHHHTTEECCEECTTSSCTTCEEEEEEC-CTTCCHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHCCceEEeECCCCCCCCCceEEEEE-CCCCCHHHHHHHHHHHHHHHHHh
Confidence            78889999996422   134456778899999 58899999999999999999876

>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 2-aminoethylphosphonate transaminase
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.89  E-value=2.5e-23  Score=205.70  Aligned_cols=346  Identities=12%  Similarity=0.068  Sum_probs=205.4

Q ss_pred             ccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHH
Q 010842           94 AFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAA  173 (499)
Q Consensus        94 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~a  173 (499)
                      =|.|++...+..+-+.    +..+..++ .++....+.+++++.+++++|.+++.     .-.++|+|||+++.+++...
T Consensus         3 l~~pGP~~~~~~V~~A----~~~~~~~~-~~~~~~~~~~~~r~~l~~l~~~~~~~-----~~i~~t~s~T~~~~~~~~~l   72 (361)
T d1m32a_           3 LLTPGPLTTSRTVKEA----MLFDSCTW-DDDYNIGVVEQIRQQLTALATASEGY-----TSVLLQGSGSYAVEAVLGSA   72 (361)
T ss_dssp             ECSSSSCCCCHHHHHT----TCCCCCTT-SHHHHTTTHHHHHHHHHHHHCSSSSE-----EEEEEESCHHHHHHHHHHHS
T ss_pred             cccCCCCCCCHHHHHH----hhhhccCC-CcHHHHHHHHHHHHHHHHHhCCCCCC-----EEEEECCCHHHHHHHHHHHh
Confidence            3556665555433232    22222222 22444556677899999999998652     12478889999987766543


Q ss_pred             HHHHHhHhhhhccCCeEEEcCCCCchh-HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEE
Q 010842          174 RDRALDAVGAENMHKLVVYGSDQTHST-FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCA  252 (499)
Q Consensus       174 r~~~~~~~~~~g~~~~~i~~s~~~H~s-~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~  252 (499)
                      ...          ++.+++++...+.+ ....+...+.   ....+......  ..+.+..+.....    ...+.+|.+
T Consensus        73 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~v~~  133 (361)
T d1m32a_          73 LGP----------QDKVLIVSNGAYGARMVEMAGLMGI---AHHAYDCGEVA--RPDVQAIDAILNA----DPTISHIAM  133 (361)
T ss_dssp             CCT----------TCCEEEEESSHHHHHHHHHHHHHTC---CEEEEECCTTS--CCCHHHHHHHHHH----CTTCCEEEE
T ss_pred             hhh----------ccccceeeehhhhhhHHHHhhhhhc---ccccccccccC--CccchhhHHHHHh----ccCccceEE
Confidence            211          23344444333333 4444556666   66666655443  3333333222221    123458999


Q ss_pred             ecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchh
Q 010842          253 TVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGL  332 (499)
Q Consensus       253 t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~  332 (499)
                      ++.+|.+|.+.|+++|+++|+++|++++||++++.+....+-.     . -.+|.+++++|||+++|.|.|+++++++..
T Consensus       134 ~~~~~~tG~~~~i~~i~~~~~~~g~~~~vDa~qs~G~~~~d~~-----~-~~~D~~~~s~~K~l~gp~G~g~l~~~~~~~  207 (361)
T d1m32a_         134 VHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIA-----A-LHIDYLISSANKCIQGVPGFAFVIAREQKL  207 (361)
T ss_dssp             ESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTT-----T-TTCSEEEEESSSTTCCCSSEEEEEEEHHHH
T ss_pred             EeeecccccchhhhhhhhhhcccceeeEeecccccCccccccc-----c-cccceEEeeecccccCCCCceEEEechhhh
Confidence            9999999999999999999999999999999998776544311     1 149999999999999999999999987532


Q ss_pred             HHHhhcCCccCCCCCCCCCCCc---ccCCCcccCCCCCC-CcHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCC
Q 010842          333 LVKALSTDPEYLKNKPSESNSV---VDFKDWQVGTGRRF-KSLRLWMVLRSYGVLN-LQSHIRSDIRLAKMFEGFVKSDP  407 (499)
Q Consensus       333 l~~~~~~~~~yl~~~~~~~~~~---~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~  407 (499)
                      .     ...+............   ..........+... ....+..++..+..++ .....++..++++.+.+.++.. 
T Consensus       208 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-  281 (361)
T d1m32a_         208 A-----ACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-  281 (361)
T ss_dssp             T-----TCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             h-----hhccccccccccchhhhccccccccccCCCCCchhhhHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHhhc-
Confidence            1     1111111110000000   00000000011111 1233344444444444 4555567778888899988876 


Q ss_pred             CeEEEcCC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHH
Q 010842          408 RFEIVVPR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWE  484 (499)
Q Consensus       408 ~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~  484 (499)
                      ++.+..++   ...+++|..+...       .....++.+.|.++|.+..++ ......++|++++ .+++++||+++++
T Consensus       282 g~~~~~~~~~rs~~v~~~~~p~~~-------~~~~~~~~~~l~~~gi~i~~G-~~~~~~~~Ris~~-g~~~~~di~~lv~  352 (361)
T d1m32a_         282 GFNTLLDDELHSPIITAFYSPEDP-------QYRFSEFYRRLKEQGFVIYPG-KVSQSDCFRIGNI-GEVYAADITALLT  352 (361)
T ss_dssp             TCCBSSCGGGBCSSEEEEECCCCT-------TCCHHHHHHHHHHTTEECEEC-CCSSSCEEEEECC-SSCCHHHHHHHHH
T ss_pred             CCcccCChhhcCCcEEEEECCCCC-------CCCHHHHHHHHHHCCcEEECC-CcCCCCEEEEeCC-CCCCHHHHHHHHH
Confidence            55554443   2345677654321       111456778888889654333 2333457999975 4578999999999


Q ss_pred             HHHHH
Q 010842          485 LIMEG  489 (499)
Q Consensus       485 ~l~~~  489 (499)
                      +|+++
T Consensus       353 al~~~  357 (361)
T d1m32a_         353 AIRTA  357 (361)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99886

>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]

Probab=99.89  E-value=6.6e-22  Score=196.44  Aligned_cols=354  Identities=12%  Similarity=-0.013  Sum_probs=218.9

Q ss_pred             CCCccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHH
Q 010842           87 WLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSI  166 (499)
Q Consensus        87 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~  166 (499)
                      .+-|+-+-+.|++...|..+-+.+    .....++ .++.+.++-+++++.+++++|.++..      ..+|++|||+++
T Consensus        14 ~~~p~~~l~~PGP~~v~~~Vl~am----~~~~~~h-r~~ef~~i~~~~r~~l~~ll~~~~~~------~i~~~g~gT~~~   82 (377)
T d1vjoa_          14 LEVPSRLLLGPGPSNAHPSVLQAM----NVSPVGH-LDPAFLALMDEIQSLLRYVWQTENPL------TIAVSGTGTAAM   82 (377)
T ss_dssp             CCCCCCEECSSSCCCCCHHHHHHH----SSCCCCT-TSHHHHHHHHHHHHHHHHHHTCCCSC------EEEESSCHHHHH
T ss_pred             CCCCcceeecCCCCCCCHHHHHHh----CcCCCCC-CCHHHHHHHHHHHHHHHHHhCCCCCe------EEEEcCcHHHHH
Confidence            356666666777766665544433    2222222 46778889999999999999997653      357788899998


Q ss_pred             HHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH--HHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842          167 LVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF--AKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAG  244 (499)
Q Consensus       167 ~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~--~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g  244 (499)
                      ..++.....           ++..+++....|++.  ...+...+.   ....+....+.  ..+.+..+.......   
T Consensus        83 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~---  143 (377)
T d1vjoa_          83 EATIANAVE-----------PGDVVLIGVAGYFGNRLVDMAGRYGA---DVRTISKPWGE--VFSLEELRTALETHR---  143 (377)
T ss_dssp             HHHHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTTC--CCCHHHHHHHHHHHC---
T ss_pred             HHHHHhccc-----------cccccceeeechhhhhhhhhhhhhcc---cccccccCCCC--cccchhhhhhhhcCc---
Confidence            877665432           344455555666653  334445555   55555554433  456666555544332   


Q ss_pred             CccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceE
Q 010842          245 LVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCC  324 (499)
Q Consensus       245 ~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~  324 (499)
                        +.+|+.++.+|.+|.+.|+++|+++||++|..+|+|++++.+....+-     . -..+|.++++.|||+++|.++|+
T Consensus       144 --~~~v~~~~~~~~tg~~~~i~~i~~~~~~~g~~~~vDa~~~~g~~~~~~-----~-~~~~d~~~~s~~K~~~gp~g~~~  215 (377)
T d1vjoa_         144 --PAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFL-----D-AWGVDLAYSCSQKGLGCSPGASP  215 (377)
T ss_dssp             --CSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCT-----T-TTTCSEEECCSSSTTCSCSSCEE
T ss_pred             --ceeeeeeeeeccceeeechhhhhhhhhhccceEEEecchhhhhhhhcc-----c-ccccceeeecccccccCCCEEEE
Confidence              347888999999999999999999999999999999999766543321     1 11489999999999999999999


Q ss_pred             EEEeCchhHHHhhcCCccCCCCCCC-CCCCcccCCCcccCCCCCC-Cc-HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 010842          325 LWVKQPGLLVKALSTDPEYLKNKPS-ESNSVVDFKDWQVGTGRRF-KS-LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEG  401 (499)
Q Consensus       325 l~~r~~~~l~~~~~~~~~yl~~~~~-~~~~~~~~~~~~~~~sr~~-~a-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~  401 (499)
                      +++++.. +.........+...... ............ ..+... .. ..+-..+......|.+.+.++..++++++.+
T Consensus       216 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~l~~  293 (377)
T d1vjoa_         216 FTMSSRA-IEKLQRRRTKVANWYLDMNLLGKYWGSERV-YHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWE  293 (377)
T ss_dssp             EEECHHH-HHHHHTCSSCCSCSTTCHHHHHHHHSTTCC-CCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred             ecchhhH-HhhhhccCCCCcceeeccchhhhccCcccc-cccccceechhhhHHHHhhhhhcCchHHHHHHHHHhhhhhh
Confidence            9888753 22222221111110000 000000000000 001111 01 1222334445667888899999999999999


Q ss_pred             HHhcCCCeEEEcCC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeECCEEEEEEeccCCCCcHH
Q 010842          402 FVKSDPRFEIVVPR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVGGLYMLRFAVGASLTDER  477 (499)
Q Consensus       402 ~L~~~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lRi~~~~~~~t~~  477 (499)
                      .+... ++.++.++   ...+++|.++..-         ..+++.+.|.++ |+.+-.+....+..++|++++++.+|++
T Consensus       294 ~l~~~-~~~~~~~~~~rs~~v~~~~~p~~~---------~~~~l~~~L~~~~gI~v~~G~~~~~~~~~Ris~~g~~~t~e  363 (377)
T d1vjoa_         294 RLEDI-GLSLHVEKEYRLPTLTTVCIPDGV---------DGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKE  363 (377)
T ss_dssp             HHHHT-TCCBSSCGGGBCSSEEEEECCTTC---------CHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHH
T ss_pred             hhhcc-CceeecChHhcCCeEEEEECCCCC---------CHHHHHHHHHhcCCEEEecCcccccCCEEEEecCcCCCCHH
Confidence            99886 56555433   2346677764311         145566666544 6433222211122469999656788999


Q ss_pred             HHHHHHHHHHHHH
Q 010842          478 HVVAAWELIMEGA  490 (499)
Q Consensus       478 di~~l~~~l~~~~  490 (499)
                      ||++++++|+++.
T Consensus       364 di~~lv~al~~~l  376 (377)
T d1vjoa_         364 SVDQLIPALEQVL  376 (377)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            9999999999875

>d1b5pa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermus thermophilus [TaxId: 274]

Probab=99.88  E-value=5.7e-22  Score=197.50  Aligned_cols=327  Identities=14%  Similarity=0.082  Sum_probs=218.9

Q ss_pred             HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      |..+.+.+..++......|....+..++.+++.+|+.+..|.+-+.     ...++|+|+++|+..++.+..+       
T Consensus        46 p~~i~~a~~~~~~~~~~~Y~~~~G~~~lR~~ia~~~~~~~~~~~~~-----~~i~it~G~~~al~~~~~~l~~-------  113 (382)
T d1b5pa_          46 PEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTP-----EETIVTVGGSQALFNLFQAILD-------  113 (382)
T ss_dssp             CHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCG-----GGEEEESHHHHHHHHHHHHHCC-------
T ss_pred             CHHHHHHHHHHHhcCCcCCCCCCCCHHHHHHHHhhhhhhccccccc-----ccceecCCHHHHHHHHHHHhCC-------
Confidence            4456666777776666678878888999999999999988875321     2568999999988877776532       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|+++.+++..+..+++..|.   .++.||.++++++.+|+++|++++.+.      +.+++.+.++||||.+
T Consensus       114 ----~gd~vl~~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~P~NPTG~~  180 (382)
T d1b5pa_         114 ----PGDEVIVLSPYWVSYPEMVRFAGG---VVVEVETLPEEGFVPDPERVRRAITPR------TKALVVNSPNNPTGAV  180 (382)
T ss_dssp             ----TTCEEEEEESCCTHHHHHHHHTTC---EEEEEECCGGGTTCCCHHHHHTTCCTT------EEEEEEESSCTTTCCC
T ss_pred             ----CCCEEEECCCCcHHHHHHHHHhcC---eEEEEecccccccCCCHHHHHHhCCCC------CeEEEECCCCCCcchh
Confidence                566788899999999999999999   999999887666899999999887543      3367888899999999


Q ss_pred             ---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhc
Q 010842          263 ---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALS  338 (499)
Q Consensus       263 ---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~  338 (499)
                         +.+++|+++|++||+|+++|.+|+.+.+..+.... ......-..+..++.|.++.| .-+|+++..++ .+.....
T Consensus       181 ~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~i~~~s~SK~~~~~GlR~G~~~~~~~-~i~~~~~  258 (382)
T d1b5pa_         181 YPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP-GRVAPEHTLTVNGAAKAFAMTGWRIGYACGPKE-VIKAMAS  258 (382)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCG-GGTCTTTEEEEEESTTTTTCGGGCCEEEECCHH-HHHHHHH
T ss_pred             CCHHHHHHHHHHHHHcCeEEEEEccccceecCCCCCCH-HHcCCCCEEEEecchhhccCcHhheEEEEECHH-HHHHHHH
Confidence               55788999999999999999999876543222211 111112235556789998766 66899876543 2222111


Q ss_pred             CCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-----cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          339 TDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-----GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       339 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                      .. .+...                    .............+     ....++...+...++++.+.+.+.+. ++++..
T Consensus       259 ~~-~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~  316 (382)
T d1b5pa_         259 VS-RQSTT--------------------SPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL-GLKAVR  316 (382)
T ss_dssp             HH-HTTTC--------------------SCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCBCC
T ss_pred             HH-Hhccc--------------------CcccccccccccccccccchhHHHHHHHHHHHhhhhHHHHHHhhc-CCeEec
Confidence            11 00000                    00112222222211     12333444455556666777777765 676553


Q ss_pred             CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          414 PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       414 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      +.....+++.+.+..        .....+.+.+.++|+++..+..+.+.+++|++++   +++++|++.+++|.++
T Consensus       317 p~gg~~~~~~~~~~~--------~~~~~~~~~l~e~gV~v~PG~~F~~~~~iRis~~---~~~e~l~~al~rl~~~  381 (382)
T d1b5pa_         317 PSGAFYVLMDTSPIA--------PDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA---TSEENLRKALERFARV  381 (382)
T ss_dssp             CSBTTEEEEECTTTC--------SSHHHHHHHHHHTTEECEESGGGTCTTEEEEECC---SCHHHHHHHHHHGGGG
T ss_pred             CCceEEEeEeCCCCC--------CCHHHHHHHHHHCCEEEEeCcccCCCCeEEEEEc---CCHHHHHHHHHHHHHh
Confidence            333344555665432        0134566777788877666666777788999985   5788899998888764

>d1gdea_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=99.87  E-value=1.2e-21  Score=195.62  Aligned_cols=333  Identities=13%  Similarity=0.035  Sum_probs=218.1

Q ss_pred             hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      +|..+.+.+...++.....|....+..++.+++.+|+.+..+.....    ....++|+|+++++..++.+..+      
T Consensus        39 ~p~~v~~~~~~a~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~----~~~i~~t~G~~~~l~~~~~~l~~------  108 (388)
T d1gdea_          39 TPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADP----KTEIMVLLGANQAFLMGLSAFLK------  108 (388)
T ss_dssp             CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCT----TTSEEEESSTTHHHHHHHTTTCC------
T ss_pred             CCHHHHHHHHHHHhcCccCCCCCcCCHHHHHHHHHHHHhhccccCCC----hheeeeccCcchHHHHHHHHhcC------
Confidence            34556667777776555567777788999999999998876653210    02468899999998877765532      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                           ++..|+++.++|..+..+++.+|.   +++.+|++++++|.+|+++|++.+++.      +.+++.+.++||||.
T Consensus       109 -----~gd~vlv~~P~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~P~NPtG~  174 (388)
T d1gdea_         109 -----DGEEVLIPTPAFVSYAPAVILAGG---KPVEVPTYEEDEFRLNVDELKKYVTDK------TRALIINSPCNPTGA  174 (388)
T ss_dssp             -----TTCEEEEEESCCTTHHHHHHHHTC---EEEEEECCGGGTTCCCHHHHHHHCCTT------EEEEEEESSCTTTCC
T ss_pred             -----CCCEEEECCCCcHHHHHHHHHcCC---EEEEeecccccCCCCCHHHHHHhCccC------CeEEEECCCcCCCCC
Confidence                 567888999999999999999999   999999987667999999999988654      347888899999999


Q ss_pred             c---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhc--CCCCCceeEecccccccCC-CcceEEEEeCchhHHH
Q 010842          262 V---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN--GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVK  335 (499)
Q Consensus       262 i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~--g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~  335 (499)
                      +   +.+++|+++|++|++++++|.+|+.+....+.......  +...-..+..+..|.++.| .-+|+++..++. ...
T Consensus       175 ~~s~~~~~~l~~~a~~~~~~vi~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~ii~~~~~-~~~  253 (388)
T d1gdea_         175 VLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWI-IER  253 (388)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTTCGGGCCEEEECCHHH-HHH
T ss_pred             cCCHHHHHHHHHHHHHcCCEEEEEcCChhhhhccCCCCChhhccCCCCeEEEEeCChhhccCccccEEEEEeeccc-hhh
Confidence            9   55788999999999999999999876443222222111  1111235667889998755 678988876542 111


Q ss_pred             hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010842          336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG----VLNLQSHIRSDIRLAKMFEGFVKSDPRFEI  411 (499)
Q Consensus       336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~  411 (499)
                      ..... .....                    ....+...+....+.    .+.+.+..++..+....+.+.|... +++.
T Consensus       254 ~~~~~-~~~~~--------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~  311 (388)
T d1gdea_         254 MVKFQ-MYNAT--------------------CPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM-GLPT  311 (388)
T ss_dssp             HHHHH-HTTTC--------------------SCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCCC
T ss_pred             hhhcc-ccccc--------------------cccccchhhHHHHHhhccchhHHHHHHHHHHHhhhhhhhhhhhc-cccc
Confidence            11110 00000                    001222233333332    1234455555666777788888775 4554


Q ss_pred             EcCCCce-EEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeE--CCEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          412 VVPRHFA-LVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIV--GGLYMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       412 ~~~~~~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~--~g~~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                      . .|..+ .+++++.+..        ....++.+++.+ .|+.+..+..+  .+..++|++++   ++++++++.+++|+
T Consensus       312 ~-~p~gg~fl~~~l~~~~--------~~~~~~~~~ll~e~gV~v~PG~~F~~~~~~~iRis~~---~~~e~l~~al~rL~  379 (388)
T d1gdea_         312 V-KPKGAFYIFPRIRDTG--------LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYA---TAYEKLEEAMDRME  379 (388)
T ss_dssp             C-CCCBTTEECCBCGGGT--------CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECC---SCHHHHHHHHHHHH
T ss_pred             c-CCCceEEEEEECCCCC--------CCHHHHHHHHHHhCCEEEEechhhCCCCCCEEEEEec---CCHHHHHHHHHHHH
Confidence            4 34433 4444443211        113456666554 46544444433  23578999996   57889999999999


Q ss_pred             HHHHHH
Q 010842          488 EGADRL  493 (499)
Q Consensus       488 ~~~~~l  493 (499)
                      ++.++.
T Consensus       380 ~~l~e~  385 (388)
T d1gdea_         380 RVLKER  385 (388)
T ss_dssp             HHHHHT
T ss_pred             HHHHhc
Confidence            887763

>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: 3-hydroxykynurenine transaminase
species: Malaria mosquito (Anopheles gambiae) [TaxId: 7165]

Probab=99.87  E-value=7e-21  Score=189.80  Aligned_cols=354  Identities=12%  Similarity=-0.006  Sum_probs=220.2

Q ss_pred             CccccccCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHH
Q 010842           89 SPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILV  168 (499)
Q Consensus        89 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~  168 (499)
                      .|+.+-+.|++...+..+-+.+   ......+  .++.+.++-+++++.|++++|.+...      ..++++|||+|+-.
T Consensus        15 ~~~~~l~~PGP~~~~~~V~~Am---~~~~~~h--r~~ef~~i~~~~r~~L~~ll~~~~~~------~i~~~gsgT~a~ea   83 (388)
T d2ch1a1          15 IPEKIMMGPGPSNCSKRVLTAM---TNTVLSN--FHAELFRTMDEVKDGLRYIFQTENRA------TMCVSGSAHAGMEA   83 (388)
T ss_dssp             CCCCBCCSSSSCCCCHHHHHHT---TSCCCCT--TCHHHHHHHHHHHHHHHHHHTCCCSC------EEEESSCHHHHHHH
T ss_pred             CCcceeeeCCCCCCCHHHHHHh---CcCCCCC--CCHHHHHHHHHHHHHHHHHhCCCCCe------EEEEcCcHHHHHHH
Confidence            3455667777766554443332   2222222  36778888899999999999996432      34678889998876


Q ss_pred             HHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH--HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCc
Q 010842          169 TLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA--KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLV  246 (499)
Q Consensus       169 al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~--ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~  246 (499)
                      ++.....           ++..+++....|++..  ..+...+.   ..+.++..+..  ..+.+.++..+....     
T Consensus        84 ~~~~l~~-----------~~~~vl~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~-----  142 (388)
T d2ch1a1          84 MLSNLLE-----------EGDRVLIAVNGIWAERAVEMSERYGA---DVRTIEGPPDR--PFSLETLARAIELHQ-----  142 (388)
T ss_dssp             HHHHHCC-----------TTCEEEEEESSHHHHHHHHHHHHTTC---EEEEEECCTTS--CCCHHHHHHHHHHHC-----
T ss_pred             HHHHhcc-----------ccccccccccccccccchhhhhhhcc---ccccccccccc--ccchhhhhhhhccCC-----
Confidence            6665532           3444555556776644  44556676   77777776543  678888777765432     


Q ss_pred             cEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEE
Q 010842          247 PLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLW  326 (499)
Q Consensus       247 p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~  326 (499)
                      +.++++++.+|.+|.+.|+++|+++||++|..++||++++.+....+--     .+ .+|.++++.|||++.|.|+|+++
T Consensus       143 ~~~v~~~~~~t~tG~~~~~~~i~~~~~~~~~~~~vD~~ss~g~~pid~~-----~~-~~d~~~~s~~K~~~gp~G~g~~~  216 (388)
T d2ch1a1         143 PKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMD-----KW-EIDAVYTGAQKVLGAPPGITPIS  216 (388)
T ss_dssp             CSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTT-----TT-TCCEEECCCC-CCCCCSSCEEEE
T ss_pred             cceeeeeecccccccccchhhhcchhccccceeeeeeeecccccccchh-----cc-CceEEEEccccccCCCCeEEEEe
Confidence            3488999999999999999999999999999999999987765544211     11 49999999999999999999999


Q ss_pred             EeCchhHHHhhcCCccCCCCCCCCCCCcccCCCccc-CCCCCCC-----cHHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q 010842          327 VKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQV-GTGRRFK-----SLRLWMVLRSYGVLNLQSHIRSDIRLAKMFE  400 (499)
Q Consensus       327 ~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~-~~sr~~~-----al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~  400 (499)
                      ++..... ............... ............ ...+...     ...+..+++.+...+.....++......++.
T Consensus       217 ~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  294 (388)
T d2ch1a1         217 ISPKALD-VIRNRRTKSKVFYWD-LLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILY  294 (388)
T ss_dssp             ECHHHHH-HHHTCSSCCSCGGGC-HHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred             ccHHHHH-hhhcccCcccccccc-chhhhhhhcccccccccCccchHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence            9876432 222111111100000 000000000000 1111111     1244455565666777777777777777777


Q ss_pred             HHHhcCCCeEEEcCC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEee--eECCEEEEEEeccCCCC
Q 010842          401 GFVKSDPRFEIVVPR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHT--IVGGLYMLRFAVGASLT  474 (499)
Q Consensus       401 ~~L~~~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~--~~~g~~~lRi~~~~~~~  474 (499)
                      ..+.......++.++   ...+++|++...-       +  ..++.+.|.++ |+. +..+  .+.+ ..||++.++..+
T Consensus       295 ~~~~~~~~~~~~~~~~~rs~~v~~~~~p~g~-------~--~~~l~~~l~~~~gI~-v~~G~~~~~~-~~~RIs~~g~~~  363 (388)
T d2ch1a1         295 EGLGKMGLDIFVKDPRHRLPTVTGIMIPKGV-------D--WWKVSQYAMNNFSLE-VQGGLGPTFG-KAWRVGIMGECS  363 (388)
T ss_dssp             HHHHHHTCCBSSCSGGGBCTTEEEEECCTTC-------C--HHHHHHHHHHHHCBC-CBCCCGGGTT-TEEEEECCGGGC
T ss_pred             hhhhhcccccccCCHHHhCCeEEEEECCCCC-------C--HHHHHHHHhhcCCEE-EeCCCccccC-CEEEEcCCcCCC
Confidence            777665322222222   2346788885321       0  34555666544 543 3322  2233 369999656778


Q ss_pred             cHHHHHHHHHHHHHHHHHH
Q 010842          475 DERHVVAAWELIMEGADRL  493 (499)
Q Consensus       475 t~~di~~l~~~l~~~~~~l  493 (499)
                      |+|||++++++|+++.+..
T Consensus       364 t~edI~~ll~alke~L~~~  382 (388)
T d2ch1a1         364 TVQKIQFYLYGFKESLKAT  382 (388)
T ss_dssp             SHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHhh
Confidence            9999999999999998874

>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Alanine-glyoxylate aminotransferase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.87  E-value=1.7e-21  Score=194.03  Aligned_cols=328  Identities=11%  Similarity=-0.037  Sum_probs=216.6

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCC--CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh-
Q 010842          124 SPASTELEIVVMDWLATMLKLP--KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST-  200 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~--~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s-  200 (499)
                      ++...++-+++.+.++++++..  .+.     ...+||+|||+|+-.++......        ..++..+++....|++ 
T Consensus        31 ~~~f~~~~~~~~~~~r~~~~~~~~~~~-----~~i~~t~sgT~a~~~~~~~l~~~--------~~~gd~vlv~~~~~~~~   97 (382)
T d2bkwa1          31 SPEFVSIFQRVLKNTRAVFKSAAASKS-----QPFVLAGSGTLGWDIFASNFILS--------KAPNKNVLVVSTGTFSD   97 (382)
T ss_dssp             SHHHHHHHHHHHHHHHHHTTCCGGGTC-----EEEEEESCTTHHHHHHHHHHSCT--------TCSCCEEEEECSSHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHhhhcCCCC-----eEEEEeCcHHHHHHHHHHHHHHh--------cCCCCceEEEEechhhh
Confidence            5667777788889999999862  111     13589999999988777654211        1145677777778877 


Q ss_pred             -HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC--C
Q 010842          201 -FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG--I  277 (499)
Q Consensus       201 -~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~--~  277 (499)
                       +...+...|.   .+..+...+.+ ...+.+.+++.+.+..     +.++++++.+|.+|...|+++++++|++++  +
T Consensus        98 ~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~tg~~~~~~~~~~~~~~~~~~~  168 (382)
T d2bkwa1          98 RFADCLRSYGA---QVDVVRPLKIG-ESVPLELITEKLSQNS-----YGAVTVTHVDTSTAVLSDLKAISQAIKQTSPET  168 (382)
T ss_dssp             HHHHHHHHTTC---EEEEECCSSTT-SCCCHHHHHHHHHHSC-----CSEEEEESEETTTTEECCHHHHHHHHHHHCTTS
T ss_pred             hhhhhcccccc---ccccccccCCC-CccchhHHHHHhhhcc-----chheeeeeccccccccccchhhhhhccccccce
Confidence             3445566777   66666544332 4678898888876532     347999999999999999999999998875  9


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhh-----cCCccCCCCCCCCCC
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL-----STDPEYLKNKPSESN  352 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~-----~~~~~yl~~~~~~~~  352 (499)
                      ++|||++++.+....+-..      .++|.+++++|||+++|.|+|+++++++... +..     .....|......   
T Consensus       169 ~~~vDa~qs~g~~pid~~~------~giD~~~~s~~K~l~gP~G~g~l~vs~~~~~-~~~~~~~~~~~~~~~~~~~~---  238 (382)
T d2bkwa1         169 FFVVDAVCSIGCEEFEFDE------WGVDFALTASQKAIGAPAGLSISLCSSRFMD-YALNDSKNGHVHGYFSSLRR---  238 (382)
T ss_dssp             EEEEECTTTTTTSCCCTTT------TTCSEEEEESSSTTCCCSCEEEEEECHHHHH-HHTCHHHHCCCSCSTTCHHH---
T ss_pred             eeeeecccccccccccccc------cCeeEEeecccccCcCCCchhhhhccHHHHh-hhhhcccCCCcccchhhhhh---
Confidence            9999999988766543211      1499999999999999999999999986432 111     111122111000   


Q ss_pred             CcccCC-CcccCCCCCC-----CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--C---CceEEE
Q 010842          353 SVVDFK-DWQVGTGRRF-----KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--R---HFALVC  421 (499)
Q Consensus       353 ~~~~~~-~~~~~~sr~~-----~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~---~~~~v~  421 (499)
                      ...... .........+     ....+-.+++.+..+|++.+.++..++++++++.+.+..++..+..  +   ...+++
T Consensus       239 ~~~~~~~~~~~~~~~~~Tp~~~~i~al~~aL~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~s~~v~~  318 (382)
T d2bkwa1         239 WTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMSDWFKDSLVNGLQLTSVSRYPSNMSAHGLTA  318 (382)
T ss_dssp             HHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTTCCEESSCSSSTTBCSSCEE
T ss_pred             hhhhhhcccccccccccCCcHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHhhhcccccccccCchhccCCcEEE
Confidence            000000 0000011111     1234556677777789999999999999999999988777766542  1   234566


Q ss_pred             EEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee-ECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHhc
Q 010842          422 FRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI-VGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       422 f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~~  495 (499)
                      |....            ...+.+.|.++|+.+-.+.. ..+..++|++.+...++++||++++++|..+...|.+
T Consensus       319 ~~~~~------------~~~~~~~L~~~gi~i~~G~~~~~~~~~~Ri~~~G~~~~~e~i~~l~~~l~~i~~~L~~  381 (382)
T d2bkwa1         319 VYVAD------------PPDVIAFLKSHGVVIAGGIHKDIGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQR  381 (382)
T ss_dssp             EECSC------------HHHHHHHHHHTTEECBCCCCTTTGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred             EcCCC------------HHHHHHHHHHCCeEEECCCChhhcCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHHHCc
Confidence            76643            24566667777854322211 1233569999656778889999999999877766654

>d2bwna1 c.67.1.4 (A:2-397) 5-aminolevulinate synthase {Rhodobacter capsulatus [TaxId: 1061]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 5-aminolevulinate synthase
species: Rhodobacter capsulatus [TaxId: 1061]

Probab=99.87  E-value=2.2e-20  Score=184.52  Aligned_cols=338  Identities=14%  Similarity=0.112  Sum_probs=221.4

Q ss_pred             CCCCCccccccCCCCCChHHHHHHHHHHHcccCCcccccCh---hhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCC
Q 010842           85 THWLSPNFFAFFPATVSTAGFLGEMLCACFNSVGFNWLASP---ASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNT  161 (499)
Q Consensus        85 ~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p---~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~g  161 (499)
                      +++.+-.|+|.-. .+.......+.+..    ++.+...++   +...+..++.+.+++++|.+..         +++++
T Consensus        48 ~~FsSndYLGL~~-~p~v~~a~~~al~~----yG~gs~~Sr~~~G~~~~h~~LE~~lA~~~g~e~a---------ll~~s  113 (396)
T d2bwna1          48 TVWCGNDYLGMGQ-HPVVLAAMHEALEA----VGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEAA---------LVFSS  113 (396)
T ss_dssp             EECSCSCTTSGGG-CHHHHHHHHHHHHH----HCSCCCSBTTTBCCBHHHHHHHHHHHHHTTCSEE---------EEESC
T ss_pred             EEEEcccccCcCC-CHHHHHHHHHHHHH----hCCCccccccccCCchHHHHHHHHHHHHhCCCce---------eeeec
Confidence            4566667888742 22222222333332    222222222   2334444555559999999775         89999


Q ss_pred             hHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH
Q 010842          162 TSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV  241 (499)
Q Consensus       162 gt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~  241 (499)
                      |..||+..+.+....         .++.+|+.....|.|+..++++.+.   .++.++.       -|+++|++.++...
T Consensus       114 G~~An~~~i~~l~~~---------~~~d~i~~D~~~Hasi~~g~~ls~a---~~~~f~H-------nd~~~l~~l~~~~~  174 (396)
T d2bwna1         114 AYNANDATLSTLRVL---------FPGLIIYSDSLNHASMIEGIKRNAG---PKRIFRH-------NDVAHLRELIAADD  174 (396)
T ss_dssp             HHHHHHHHHHHHHHH---------STTCEEEEETTCCHHHHHHHHHSCC---CEEEECT-------TCHHHHHHHHHHSC
T ss_pred             chHHHHHHHHHHhcc---------cCCCceeehhhhhhccchhhhcccc---CceEeec-------chHHHhhhHHhhhc
Confidence            999998877764321         1467889999999999999999999   8888764       37888988776532


Q ss_pred             HcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhh--cC-CCCCceeEecccccccC
Q 010842          242 EAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL--NG-IERVDSFSFSPHKWLLS  318 (499)
Q Consensus       242 ~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~--~g-~~~aDsi~~~~hK~l~~  318 (499)
                        ...+.+||+....++.|.+.||++|.++|++||++++||.|||.+.+- +..+...  .+ ....|.++.+.-|.++.
T Consensus       175 --~~~~~~iv~egvySmdGd~apl~~l~~L~~~y~~~L~vDeAHs~Gv~G-~~G~G~~~~~~~~~~~di~~gTlsKa~g~  251 (396)
T d2bwna1         175 --PAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYG-PRGAGVAERDGLMHRIDIFNGTLAKAYGV  251 (396)
T ss_dssp             --TTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSS-TTSCCHHHHHTCGGGCSEEEEESSSTTCS
T ss_pred             --ccCceeEEEEeeccCcccccccHhHHHHhhhhcceeeeccceeeeeec-cccccchhhcCCceeeeeeeecccccccc
Confidence              344567888888899999999999999999999999999999877542 2222211  11 24589999999999975


Q ss_pred             CCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 010842          319 YLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKM  398 (499)
Q Consensus       319 p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~  398 (499)
                      .  .|++.. ++...........+|++.....                +..+...-.++..+..+..+++.++...+.++
T Consensus       252 ~--Gg~v~~-~~~~i~~l~~~~~~~ifStalp----------------p~~~aa~~~al~i~~~~~~~~~r~~l~~~~~~  312 (396)
T d2bwna1         252 F--GGYIAA-SARMVDAVRSYAPGFIFSTSLP----------------PAIAAGAQASIAFLKTAEGQKLRDAQQMHAKV  312 (396)
T ss_dssp             C--CEEEEE-CHHHHHHHHHHCHHHHTSBCCC----------------HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHH
T ss_pred             c--ccccch-hHHHHHHHHhhcchhhhcccCc----------------HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHH
Confidence            4  445544 4433322222334455443210                00112233344444334445556677788999


Q ss_pred             HHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEE---EeeeECCEEEEEEeccCCCC
Q 010842          399 FEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYL---THTIVGGLYMLRFAVGASLT  474 (499)
Q Consensus       399 l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~---~~~~~~g~~~lRi~~~~~~~  474 (499)
                      +.+.+.+. ++.+. +..++++.+.+..         +..+..+.++|. +.|..+.   .|++..+...+|+++ +..+
T Consensus       313 ~~~~l~~~-g~~~~-~~~spIvpv~ig~---------~~~~~~~a~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~l-sa~h  380 (396)
T d2bwna1         313 LKMRLKAL-GMPII-DHGSHIVPVVIGD---------PVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTP-SPVH  380 (396)
T ss_dssp             HHHHHHHH-TCCBC-CCSSSCEEEECCC---------HHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECC-CTTS
T ss_pred             HHHHHHhc-CCCcC-CCCCCEEEEEeCC---------HHHHHHHHHHHHHhCCEEEEEECCCcCCCCCeeEEEEe-CccC
Confidence            99999886 66655 4566788776643         334566777755 4685322   244456777899999 5889


Q ss_pred             cHHHHHHHHHHHHHH
Q 010842          475 DERHVVAAWELIMEG  489 (499)
Q Consensus       475 t~~di~~l~~~l~~~  489 (499)
                      |++|||+++++|+++
T Consensus       381 t~edId~l~~~L~~i  395 (396)
T d2bwna1         381 DLKQIDGLVHAMDLL  395 (396)
T ss_dssp             CHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHh
Confidence            999999999999875

>d1bs0a_ c.67.1.4 (A:) PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS)
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=2.5e-20  Score=184.84  Aligned_cols=294  Identities=11%  Similarity=0.067  Sum_probs=203.4

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA  208 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~  208 (499)
                      .+..++.+.+++++|.+..         +++++|++||+.++.+...           ++..|++....|.|+..+++..
T Consensus        83 ~~~~~lE~~LA~~~g~e~a---------l~~~SG~~an~~~i~al~~-----------~~d~v~~d~~~h~si~~g~~~~  142 (383)
T d1bs0a_          83 VVHQALEEELAEWLGYSRA---------LLFISGFAANQAVIAAMMA-----------KEDRIAADRLSHASLLEAASLS  142 (383)
T ss_dssp             HHHHHHHHHHHHHHTCSEE---------EEESCHHHHHHHHHHHHCC-----------TTCEEEEETTCCHHHHHHHHTS
T ss_pred             hHHHHHHHHHHHhcCCCce---------EEecccchhhHHHHHhhcC-----------CCceEEeeccccHHHhhccccC
Confidence            3444444559999998764         9999999999988876632           5778999999999999999988


Q ss_pred             CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccch
Q 010842          209 GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGS  288 (499)
Q Consensus       209 G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~  288 (499)
                      +.   .++.++       ..|+++|++.+.+..   ....+|++....+.+|.+-|+++|.++|++||++++||+||+.+
T Consensus       143 ~~---~~~~~~-------hnd~~~le~~l~~~~---~~~~~vv~e~v~s~~G~i~pl~~l~~l~~~~~~~livDeah~~g  209 (383)
T d1bs0a_         143 PS---QLRRFA-------HNDVTHLARLLASPC---PGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTG  209 (383)
T ss_dssp             SS---EEEEEC-------TTCHHHHHHHHHSCC---SSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTT
T ss_pred             CC---cceEec-------chHHHHHHHHhcccC---CCceEEEecCCCCCCCcccchhHHHHHHHhcCcEEEeecceeee
Confidence            88   777776       348999999886532   23346788888889999999999999999999999999999877


Q ss_pred             hccCccchh--hhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhh-cCCccCCCCCCCCCCCcccCCCcccCCC
Q 010842          289 ACICPEFRH--YLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL-STDPEYLKNKPSESNSVVDFKDWQVGTG  365 (499)
Q Consensus       289 ~~~~~~~~~--~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~~s  365 (499)
                      .+- +..+.  ...++ ..|.+....-|.++.+  .|++.... ... +.+ .....|++....               +
T Consensus       210 v~G-~~g~G~~~~~~~-~~~~~~~t~~ka~g~~--Gg~v~~~~-~~~-~~l~~~~~~~~~s~~~---------------~  268 (383)
T d1bs0a_         210 VIG-EQGRGSCWLQKV-KPELLVVTFGKGFGVS--GAAVLCSS-TVA-DYLLQFARHLIYSTSM---------------P  268 (383)
T ss_dssp             TSS-GGGCCHHHHTTC-CCSEEEEESSSTTSSC--CEEEEECH-HHH-HHHHHHCHHHHSSBCC---------------C
T ss_pred             ecC-CcccchHHHcCC-cccccccccccccccc--ccccccch-hHH-HHHHhhchhhhhcccc---------------c
Confidence            543 22221  11222 3566777777887754  44444433 222 222 223344433210               0


Q ss_pred             CCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHH
Q 010842          366 RRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDW  445 (499)
Q Consensus       366 r~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~  445 (499)
                       +..+..+-.++..+-....+.+.++..++..++.+.|.+. ++.+. +..++++.+.+..         +....++.++
T Consensus       269 -p~~~aa~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~-g~~~~-~~~s~Ii~v~~g~---------~~~a~~~~~~  336 (383)
T d1bs0a_         269 -PAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFTLA-DSCSAIQPLIVGD---------NSRALQLAEK  336 (383)
T ss_dssp             -HHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCEEC-SCCSSBCCEEEES---------HHHHHHHHHH
T ss_pred             -chHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhc-CCccC-CCCCCEEEEEECC---------HHHHHHHHHH
Confidence             0011222334444434556677788889999999999987 67765 4445666555533         3446678889


Q ss_pred             HHhcCCEEE---EeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          446 VNSTGRVYL---THTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       446 l~~~g~~~~---~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      |.++|+.+.   .|+...|...+|+++ +..+|++|||+++++|..+
T Consensus       337 L~~~Gi~v~~~~~PtVp~g~~~lRi~~-~a~ht~edid~l~~~L~~~  382 (383)
T d1bs0a_         337 LRQQGCWVTAIRPPTVPAGTARLRLTL-TAAHEMQDIDRLLEVLHGN  382 (383)
T ss_dssp             HHHTTEECCEECTTSSCTTCEEECCBC-CTTCCHHHHHHHHHHHHHH
T ss_pred             HHHCCceEEEEcCCCCCCCCceEEEEe-CCCCCHHHHHHHHHHHHhc
Confidence            999995321   234456788899999 5899999999999999875

>d1d2fa_ c.67.1.3 (A:) Modulator in mal gene expression, MalY {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Modulator in mal gene expression, MalY
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=3.8e-20  Score=182.67  Aligned_cols=334  Identities=11%  Similarity=-0.019  Sum_probs=210.9

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ..+.+.+...+......|....+ .++.+++.+|+.+.+|.+.+.     ...++|+|+++++..++.+..+        
T Consensus        15 ~~i~eal~~~~~~~~~~Y~~~~g-~~lr~~ia~~~~~~~g~~~~~-----~~i~it~G~~~~l~~~~~~l~~--------   80 (361)
T d1d2fa_          15 PCIIEALNQRLMHGVFGYSRWKN-DEFLAAIAHWFSTQHYTAIDS-----QTVVYGPSVIYMVSELIRQWSE--------   80 (361)
T ss_dssp             HHHHHHHHHHHTTCCCCCCCSCC-HHHHHHHHHHHHHHSCCCCCG-----GGEEEESCHHHHHHHHHHHSSC--------
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCC-HHHHHHHHHHHHHHhCCCCCc-----ceEEEeCCHHHHHHHHhhhccc--------
Confidence            34555666655444445655555 578899999999999985331     2579999999987766665422        


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC-CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV-DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                         ++..|+++.+.|..+..+++..|.   .++.++.+. ++++.+|++.+++.+.+.     .+.+|+.+.++||||.+
T Consensus        81 ---~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~~~~~~~~~-----~~~~i~l~~p~NPTG~~  149 (361)
T d1d2fa_          81 ---TGEGVVIHTPAYDAFYKAIEGNQR---TVMPVALEKQADGWFCDMGKLEAVLAKP-----ECKIMLLCSPQNPTGKV  149 (361)
T ss_dssp             ---TTCEEEEEESCCHHHHHHHHHTTC---EEEEEECEECSSSEECCHHHHHHHHTST-----TEEEEEEESSCTTTCCC
T ss_pred             ---cccccccccccccchhHHHHhhcc---eEEeecccccccccccccccchhhcccC-----CceeEEecccccccccc
Confidence               567788899999999999999999   888888764 334789999999988542     24478888999999988


Q ss_pred             CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhc
Q 010842          263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALS  338 (499)
Q Consensus       263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~  338 (499)
                      -+   +++|+++|+++|+++++|.+|+.+.+..............-..+..+..|.++.| ..+|++++.+.........
T Consensus       150 ~s~~~~~~i~~~~~~~~~~lI~De~y~~~~~~~~~~~~~~~~~~~~~v~~~s~SK~~~~~g~R~g~~~~~~~~~~~~~~~  229 (361)
T d1d2fa_         150 WTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLS  229 (361)
T ss_dssp             CCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEEEECSHHHHTCGGGCCEEEEECSHHHHHHHHH
T ss_pred             cchhhhhhhhhhhhhhheeeeecccccccccccccccccccccccccccccccccccccccccceeeecchhHHHHHHhh
Confidence            54   7789999999999999999998764322111111111111235566677866544 5678887766543322221


Q ss_pred             CCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHH--hcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEcCC
Q 010842          339 TDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRS--YGVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEIVVPR  415 (499)
Q Consensus       339 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~--~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~~~~~  415 (499)
                      .......                  .+.. ....+.+++..  ...+..++......++++.+.+.+.+ .+++.+. +|
T Consensus       230 ~~~~~~~------------------~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~-~p  289 (361)
T d1d2fa_         230 ALKGRDG------------------LSSP-SVLALTAHIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQ-IP  289 (361)
T ss_dssp             HHHTTSC------------------CCSC-CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCC-CC
T ss_pred             hcccccc------------------cccc-hhhhHHHHHHHhhccchhhhcccccchhhHHHHHHHhhhhccccccc-cc
Confidence            1000000                  0001 11122222222  23445556666666666666666543 4566544 34


Q ss_pred             Cce-EEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          416 HFA-LVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       416 ~~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      +.+ .+.+.+.+..        ....++.++|.++ |++++.+..+.  +..++|+|++   ++++++++.++.|.++.+
T Consensus       290 ~gg~~~~~~l~~~~--------~~~~~~~~~Ll~~~gv~v~pG~~F~~~~~~~vRis~~---~~~e~l~~al~rl~~~l~  358 (361)
T d1d2fa_         290 QSTYLAWLDLRPLN--------IDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAG---CPRSKLEKGVAGLINAIR  358 (361)
T ss_dssp             SBCSEEEEECGGGC--------CCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHHHHHH
T ss_pred             CceeEEEEEccCCC--------CCHHHHHHHHHHhCCEEEEeccccCCCCCCEEEEEEc---CCHHHHHHHHHHHHHHHH
Confidence            433 3344554321        0145677777655 75554444332  4568999985   578999999999999888


Q ss_pred             HH
Q 010842          492 RL  493 (499)
Q Consensus       492 ~l  493 (499)
                      ++
T Consensus       359 ~l  360 (361)
T d1d2fa_         359 AV  360 (361)
T ss_dssp             HH
T ss_pred             hc
Confidence            75

>d1mdoa_ c.67.1.4 (A:) Aminotransferase ArnB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase ArnB
species: Salmonella typhimurium [TaxId: 90371]

Probab=99.86  E-value=5.9e-21  Score=189.56  Aligned_cols=333  Identities=14%  Similarity=0.100  Sum_probs=213.0

Q ss_pred             HHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccC
Q 010842          108 EMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMH  187 (499)
Q Consensus       108 ~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~  187 (499)
                      +.+...+...  .+..+|...++|++    +++++|.+..         ++|++||.|+..++.+..-+          +
T Consensus        16 ~~~~~~~~~~--~~~~G~~v~~~E~~----la~~~g~~~a---------i~~~sgt~Al~~al~al~~~----------~   70 (376)
T d1mdoa_          16 AAVKTVLDSG--WITTGPKNQELEAA----FCRLTGNQYA---------VAVSSATAGMHIALMALGIG----------E   70 (376)
T ss_dssp             HHHHHHHHHT--CCSSSHHHHHHHHH----HHHHHCCSEE---------EEESCHHHHHHHHHHHTTCC----------T
T ss_pred             HHHHHHHhcC--CCcCCHHHHHHHHH----HHHHHCcCeE---------EEeCCHHHHHHHHHHHhCCC----------C
Confidence            3344445432  44568989999987    9999998754         89999999999998765211          5


Q ss_pred             CeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhH
Q 010842          188 KLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEP  267 (499)
Q Consensus       188 ~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~  267 (499)
                      +.+|+++..+|.+...++...|.   .++.++++++ ++.+|+++|+++|++.++      +|++++   ..|...|+++
T Consensus        71 gdeVi~~~~~~~~~~~ai~~~g~---~pv~~d~~~~-~~~~d~~~l~~~i~~~tk------aIi~~h---~~G~~~~~~~  137 (376)
T d1mdoa_          71 GDEVITPSMTWVSTLNMIVLLGA---NPVMVDVDRD-TLMVTPEHIEAAITPQTK------AIIPVH---YAGAPADLDA  137 (376)
T ss_dssp             TCEEEEESSSCHHHHHHHHHTTC---EEEEECBCTT-TCCBCHHHHHHHCCTTEE------EECCBC---GGGCCCCHHH
T ss_pred             CCEEEEecccccccccchhcccc---ceeeeccccc-ccCCCHHHHHHhcCCCCe------EEEEeC---CCCCccchhH
Confidence            77899999999999999999999   9999999876 489999999999987654      566554   6899999999


Q ss_pred             HHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCC
Q 010842          268 LAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNK  347 (499)
Q Consensus       268 I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~  347 (499)
                      |.++|+++|+++++|+|++.+...    .....|.-+...+++.++|++.++ +.|++++.++....+............
T Consensus       138 i~~i~~~~~i~vIeD~a~a~g~~~----~~~~~g~~g~~~~Sf~~~K~l~~g-~GG~i~t~~~~l~~~~~~~~~~g~~~~  212 (376)
T d1mdoa_         138 IYALGERYGIPVIEDAAHATGTSY----KGRHIGARGTAIFSFHAIKNITCA-EGGIVVTDNPQFADKLRSLKFHGLGVD  212 (376)
T ss_dssp             HHHHHHHHTCCBCEECTTCTTCEE----TTEETTSSSEEEEECCTTSSSCSS-SCEEEEESCHHHHHHHHHHTBTTEECC
T ss_pred             HHHHHHhcCceEEeccchhccCee----CCeecccccCccccCCCcCCCCCC-CCCEEEEechhHHHHHHhhcccCCccc
Confidence            999999999999999999766432    222222223567788899999754 568888888764433221111111000


Q ss_pred             CCCCCCcccCCCc-ccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC-----ceEEE
Q 010842          348 PSESNSVVDFKDW-QVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH-----FALVC  421 (499)
Q Consensus       348 ~~~~~~~~~~~~~-~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~-----~~~v~  421 (499)
                      ............+ ....+..++...+-+++-......+.+++++..++++++.+.|++++...+.....     ...++
T Consensus       213 ~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aai~~~qL~~~~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~  292 (376)
T d1mdoa_         213 AWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLDALNARRAAIAAQYHQAMADLPFQPLSLPSWEHIHAWHLFI  292 (376)
T ss_dssp             -----------CCEESSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTSSCEECCCCSSCEECCCSCEE
T ss_pred             ccccccccccccccchhcccccccchhhhhhhhhhhhhhhHHHHHHhhhhhhhhhhcccccccccccccccccccccccc
Confidence            0000000000000 01112222332333333333347788899999999999999999987655443221     11222


Q ss_pred             EEecCCCCCCcchhHHHHHHHHHHHHhcCCEEE---Eeee--------EC-C---------EEEEEEeccCCCCcHHHHH
Q 010842          422 FRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYL---THTI--------VG-G---------LYMLRFAVGASLTDERHVV  480 (499)
Q Consensus       422 f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~--------~~-g---------~~~lRi~~~~~~~t~~di~  480 (499)
                      +......      ......++.+.|.+.|+-.-   .+..        +. +         ...+.+=+ ++..|++||+
T Consensus       293 ~~~~~~~------~~~~Rd~l~~~L~~~gI~~~~~y~~~~~~~~~~~~~~~~~~p~a~~~~~~~i~LP~-~~~lt~~ei~  365 (376)
T d1mdoa_         293 IRVDEAR------CGITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPL-FPDMTESDFD  365 (376)
T ss_dssp             EECCHHH------HSSCHHHHHHHHHHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTEEEECC-CTTCCHHHHH
T ss_pred             ccccccc------chhhHHHHHHHHHHCCCCeeeECcchhcCHHHHhhCCCCCCHHHHHHHhCEEEccC-CCCCCHHHHH
Confidence            2221100      00012467788888885221   1100        00 0         12366544 6888999999


Q ss_pred             HHHHHHHHHH
Q 010842          481 AAWELIMEGA  490 (499)
Q Consensus       481 ~l~~~l~~~~  490 (499)
                      +++++|++++
T Consensus       366 ~I~~~i~~i~  375 (376)
T d1mdoa_         366 RVITALHQIA  375 (376)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHh
Confidence            9999999874

>d1b9ha_ c.67.1.4 (A:) 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) {Amycolatopsis mediterranei [TaxId: 33910]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase)
species: Amycolatopsis mediterranei [TaxId: 33910]

Probab=99.85  E-value=5.1e-20  Score=183.11  Aligned_cols=338  Identities=12%  Similarity=0.077  Sum_probs=225.7

Q ss_pred             ChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842          101 STAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA  180 (499)
Q Consensus       101 ~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~  180 (499)
                      .....-.+.+...++.....+..+|...++|++    +++++|.+..         +++++||.|+..|+.+..-+    
T Consensus        10 ~~~~~~~~~~~~~l~~g~~~~~~g~~v~~fE~~----~a~~~g~~~~---------v~~~SGt~Al~lal~~l~~~----   72 (384)
T d1b9ha_          10 QYDDAERNGLVRALEQGQWWRMGGDEVNSFERE----FAAHHGAAHA---------LAVTNGTHALELALQVMGVG----   72 (384)
T ss_dssp             CCCHHHHHHHHHHHHTSCCBTTTCSHHHHHHHH----HHHHTTCSEE---------EEESCHHHHHHHHHHHTTCC----
T ss_pred             CCCHHHHHHHHHHHHcCCeeecCCHHHHHHHHH----HHHHHCcCeE---------EEeCCHHHHHHHHHHHcCCC----
Confidence            333334455666676654445678999999988    9999998875         99999999999998865211    


Q ss_pred             hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc
Q 010842          181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT  260 (499)
Q Consensus       181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G  260 (499)
                            ++.+|++|..++.+...++...|.   .+++++++++ ++.+|++.+++.+.++++      +|   .+++..|
T Consensus        73 ------~gdeVi~p~~t~~a~~~ai~~~g~---~p~~~d~~~~-~~~~d~~~~~~~i~~~tk------~i---~~~~~~g  133 (384)
T d1b9ha_          73 ------PGTEVIVPAFTFISSSQAAQRLGA---VTVPVDVDAA-TYNLDPEAVAAAVTPRTK------VI---MPVHMAG  133 (384)
T ss_dssp             ------TTCEEEEESSSCTHHHHHHHHTTC---EEEEECBCTT-TCCBCHHHHHHHCCTTEE------EE---CCBCGGG
T ss_pred             ------CCCEEEEecccccccccccccccc---cccccccccc-ccccchhhhccccccccc------cc---ccccccc
Confidence                  567899999999999999999999   9999998865 589999999998877654      33   3456789


Q ss_pred             ccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCC
Q 010842          261 AVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTD  340 (499)
Q Consensus       261 ~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~  340 (499)
                      ...++++|.++|++++++++.|+|++.+.......   ......+..+++++.|.+.+ .+.|++++++++.........
T Consensus       134 ~~~d~~~i~~~~~~~~i~lieD~a~a~ga~~~g~~---~g~~g~~~~~Sf~~~K~i~~-g~GG~i~t~~~~~~~~~~~~~  209 (384)
T d1b9ha_         134 LMADMDALAKISADTGVPLLQDAAHAHGARWQGKR---VGELDSIATFSFQNGKLMTA-GEGGAVVFPDGETEKYETAFL  209 (384)
T ss_dssp             CCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEE---GGGSSSCEEEECCTTSSSCS-SSCEEEEECTTCHHHHHHHHH
T ss_pred             cccccccchhhhhhhhhhhhhhhceecccccCCEe---cCcccccceecccccccccc-cccchhhhhhHHHHHHHHHHH
Confidence            99999999999999999999999997765332111   11233477888999999875 457888888776543221111


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----  415 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----  415 (499)
                      -........    ...+....+...-|...+.+...+..+  +.+++.+++..++++++.+.|++++++.....+     
T Consensus       210 ~~g~~~~~~----~~~~~~~~~G~n~rms~l~Aaig~~qL--~~ld~~~~~R~~~~~~y~~~L~~~~~i~~~~~~~~~~~  283 (384)
T d1b9ha_         210 RHSCGRPRD----DRRYFHKIAGSNMRLNEFSASVLRAQL--ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADR  283 (384)
T ss_dssp             HTBTTCCTT----CSSCCCCSCCCBCBCBHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCB
T ss_pred             hcCCCCccc----cccccccccccccccccchhhhhhhhh--hhcccchhhhhhhhhhhhhhhhcccccccccccccccc
Confidence            001110000    001111112222333445444444443  778899999999999999999999887654321     


Q ss_pred             -CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEE-eeeEC----------------------------CEEEE
Q 010842          416 -HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLT-HTIVG----------------------------GLYML  465 (499)
Q Consensus       416 -~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~~----------------------------g~~~l  465 (499)
                       ......|.+....       .....++.+.|.++|+-... +.++.                            ....+
T Consensus       284 ~~~~~~~~~~~~~~-------~~~Rd~l~~~L~~~GI~~~~~y~plh~~~~~~~~~~~~~~~~~~~~~~Pna~~l~~~~l  356 (384)
T d1b9ha_         284 NSHYMAMFRIPGLT-------EERRNALVDRLVEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCV  356 (384)
T ss_dssp             CCCSEEEEECTTCC-------HHHHHHHHHHHHHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEE
T ss_pred             cccccccceecccc-------cccHHHHHHHHHHCCCCeeeeCcchhcCHHHHhcCCCcccccccccCCHHHHHHHhCEE
Confidence             1223445543321       22345688889888963211 11110                            01335


Q ss_pred             EEeccCCCCc-HHHHHHHHHHHHHHHHH
Q 010842          466 RFAVGASLTD-ERHVVAAWELIMEGADR  492 (499)
Q Consensus       466 Ri~~~~~~~t-~~di~~l~~~l~~~~~~  492 (499)
                      .+=+ ++..| ++||+.+++.|++++++
T Consensus       357 ~LP~-~~~Lt~e~ei~~I~~~i~~~l~~  383 (384)
T d1b9ha_         357 WLHH-RVLLAGEPELHATAEIIADAVAR  383 (384)
T ss_dssp             EEEG-GGGGSCHHHHHHHHHHHHHHHHH
T ss_pred             EccC-CCCCCCHHHHHHHHHHHHHHHhh
Confidence            5554 56666 68999999999998754

>d1xi9a_ c.67.1.1 (A:) Putative alanine aminotransferase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative alanine aminotransferase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=99.85  E-value=6.1e-21  Score=190.77  Aligned_cols=336  Identities=10%  Similarity=0.041  Sum_probs=220.7

Q ss_pred             hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      +|..+.+.+..++......|....+..++.+++.+|+.+.+|.+.+.     ...++|+|+++++..++.+..+      
T Consensus        47 ~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-----~~i~i~~G~~~~~~~~~~~~~~------  115 (395)
T d1xi9a_          47 PPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITP-----DDVRVTAAVTEALQLIFGALLD------  115 (395)
T ss_dssp             CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCG-----GGEEEESHHHHHHHHHHHHHCC------
T ss_pred             CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHhhhhcccccccc-----cccccccccchhhhhhhhhhcC------
Confidence            34556666666665544567777888999999999999999986432     2468888888888777665532      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                           ++..|+++.+++..+...++..|.   .++.+|.+..++|.+|++++++.+.+.+      .+++.+.++||||.
T Consensus       116 -----~Gd~vlv~~P~y~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~~~~~~~~~~------~~v~l~~P~NPTG~  181 (395)
T d1xi9a_         116 -----PGDEILVPGPSYPPYTGLVKFYGG---KPVEYRTIEEEDWQPDIDDIRKKITDRT------KAIAVINPNNPTGA  181 (395)
T ss_dssp             -----TTCEEEEEESCCHHHHHHHHHTTC---EEEEEEEEGGGTSEECHHHHHHHCCTTE------EEEEEESSCTTTCC
T ss_pred             -----CCCEEEEcCCccccchhhhhhcCC---EEEEEeccccccccchHHHHHHhhcccc------cEEEecCCCCCccc
Confidence                 567788899999999999999999   9999998766679999999999876543      47888999999999


Q ss_pred             c---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCc-eeEecccccccCC-CcceEEEEeCchh-HHH
Q 010842          262 V---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVD-SFSFSPHKWLLSY-LDCCCLWVKQPGL-LVK  335 (499)
Q Consensus       262 i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aD-si~~~~hK~l~~p-~~~g~l~~r~~~~-l~~  335 (499)
                      +   +.+++|+++|++|++|++.|.+|.......+..... .-..... .+..+..|.++.| .-+|++++.+... +..
T Consensus       182 ~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~vi~~~S~SK~~~~~GlRvG~~~~~~~~~~~~~  260 (395)
T d1xi9a_         182 LYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPG-SLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSE  260 (395)
T ss_dssp             CCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHH-HHCSSSCEEEEEESTTTTCCGGGCCEEEEEECTTCTTHH
T ss_pred             hhhHHHHHHHHhhhhhcCeeEEeccccccccccccccchh-hcCCCCCEEEEeCcchhcccchhhcEeeEecCHHHHHHH
Confidence            9   446888899999999999999997654322111111 1111122 4456789988765 5578877654321 111


Q ss_pred             hhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHH--hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc
Q 010842          336 ALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRS--YGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV  413 (499)
Q Consensus       336 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~--~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~  413 (499)
                      .... ...+...               ..  ....+...++...  -+.+.+++..+...+.++++.+.|++.+++.+. 
T Consensus       261 ~~~~-~~~~~~~---------------~~--~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-  321 (395)
T d1xi9a_         261 VREA-IDRLARI---------------RL--CPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEIPGISTT-  321 (395)
T ss_dssp             HHHH-HHHHHHH---------------TC--CSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTSTTEECC-
T ss_pred             HHHH-HHHhhcC---------------CC--CcCHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhCCCceec-
Confidence            1000 0000000               00  0011222222222  245677888888889999999999998777654 


Q ss_pred             CCCc-eEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          414 PRHF-ALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       414 ~~~~-~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      +|+. ..+++.+.....   .  +  ..+++.++. +.|+++..+..+.  +.+++|++++   ++.+++++.++.|+++
T Consensus       322 ~p~gg~~~~~~l~~~~~---~--~--~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~Ris~~---~~~e~l~eal~rl~~~  391 (395)
T d1xi9a_         322 KPQGAFYIFPKIEVGPW---K--N--DKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFL---PPIEILEEAMDRFEKF  391 (395)
T ss_dssp             CCCBSSEECCEECSCSC---S--S--HHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECC---SCHHHHHHHHHHHHHH
T ss_pred             CCCeeEEEeEECCCCCC---C--C--HHHHHHHHHHhCCEEEEcChhhCCCCCCEEEEEec---CCHHHHHHHHHHHHHH
Confidence            4543 334444532110   0  0  223444443 4576555544442  3568999985   5788899999999988


Q ss_pred             HHH
Q 010842          490 ADR  492 (499)
Q Consensus       490 ~~~  492 (499)
                      .++
T Consensus       392 l~e  394 (395)
T d1xi9a_         392 MKE  394 (395)
T ss_dssp             HHH
T ss_pred             Hhc
Confidence            664

>d1bw0a_ c.67.1.1 (A:) Tyrosine aminotransferase (TAT) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Tyrosine aminotransferase (TAT)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.85  E-value=1.7e-20  Score=188.66  Aligned_cols=344  Identities=14%  Similarity=0.079  Sum_probs=222.1

Q ss_pred             HHHHHHHHHHcc-cCCcccccChhhHHHHHHHHHHHHHHcCCCCccc-cCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          104 GFLGEMLCACFN-SVGFNWLASPASTELEIVVMDWLATMLKLPKTFM-FSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       104 ~~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~-~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      ..+.+.+...++ .....|....+..++.+++.+|+.+.++...... .-.....++|+|+++|+..++.+..+      
T Consensus        50 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~------  123 (412)
T d1bw0a_          50 AAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICD------  123 (412)
T ss_dssp             HHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCC------
T ss_pred             HHHHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHHhcCcccccCCCCCCCeEEEecccccchhhhhhhhhc------
Confidence            344444544443 2334677777889999999999999876532110 00012578999999998888776532      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                           ++..|+++.+++..+...++..|+   +++.+|++++++|..++++|++.+.+.+      .+++.+.++||||.
T Consensus       124 -----~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~~~~~l~~~~~~~~------~~~~l~np~NPtG~  189 (412)
T d1bw0a_         124 -----AGDYALVPQPGFPHYETVCKAYGI---GMHFYNCRPENDWEADLDEIRRLKDDKT------KLLIVTNPSNPCGS  189 (412)
T ss_dssp             -----TTCEEEEEESCCTHHHHHHHHTTC---EEEEEEEEGGGTTEECHHHHHHHCCTTE------EEEEEESSCTTTCC
T ss_pred             -----cccceeeeeccchhhhhhhhccCc---cccccccccccccchhhHHHHhhhhccc------cccccccccccccc
Confidence                 577888999999999999999999   9999999877779999999988765543      47888999999999


Q ss_pred             c---CChhHHHHHHHHhCCEEEeeccccchhccCccchh---hhcCCCCCc-e-eEecccccccCC-CcceEEEEeCchh
Q 010842          262 V---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH---YLNGIERVD-S-FSFSPHKWLLSY-LDCCCLWVKQPGL  332 (499)
Q Consensus       262 i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~---~~~g~~~aD-s-i~~~~hK~l~~p-~~~g~l~~r~~~~  332 (499)
                      +   +.+++|+++|++|++|+++|.+|+.+.+.......   .....+... . +..+..|.++.| .-+|++++.+...
T Consensus       190 ~~~~~~~~~i~~~~~~~~~~vi~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~SK~~~~~G~RvG~~~~~~~~~  269 (412)
T d1bw0a_         190 NFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHG  269 (412)
T ss_dssp             CCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTC
T ss_pred             cchhhhccccccccccCCeeeechhhHHHhccCCCCCccccccccccccccccccccccCccCccCCCCcccccccchhh
Confidence            9   55788889999999999999999876443211111   111111222 2 334578977655 6689988765321


Q ss_pred             ----HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCc-HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 010842          333 ----LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKS-LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDP  407 (499)
Q Consensus       333 ----l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~  407 (499)
                          +.........+..                   +..... ..+...+.....+.+.+..++..+.++++.+.|.+.+
T Consensus       270 ~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~~  330 (412)
T d1bw0a_         270 NGPSFLEGLKRVGMLVC-------------------GPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGECI  330 (412)
T ss_dssp             SCHHHHHHHHHHHHHHT-------------------CSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTST
T ss_pred             cchhhhhhhcccccccc-------------------CCchhhhhhcccccccccccccccccchhHHHHHHHHHHHHHhc
Confidence                0000000000000                   000000 1111112222356778888888899999999999888


Q ss_pred             CeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh-cCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHH
Q 010842          408 RFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS-TGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELI  486 (499)
Q Consensus       408 ~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l  486 (499)
                      +++...+.....+..++......+...    ..++.++|.+ .|++++.+..+.+.+++|++++   ++++++++.+++|
T Consensus       331 g~~~~~p~gg~~l~~~~~~~~~~~~~~----~~~~~~~ll~~~gV~v~PG~~Fg~~g~iRis~~---~~~e~l~eal~Rl  403 (412)
T d1bw0a_         331 GLAPTMPRGAMYLMSRIDLEKYRDIKT----DVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTT---RPVEVYREAVERI  403 (412)
T ss_dssp             TEEECCCCBTTEEEEEECGGGBSSCCS----HHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC---SCHHHHHHHHHHH
T ss_pred             CceecCCCCceEEEEeCChhhcCCCCC----HHHHHHHHHHhCCEEEEeccccCCCCeEEEEEc---CCHHHHHHHHHHH
Confidence            998764433333444443211000011    2345555544 4766666666666778999986   5788999999999


Q ss_pred             HHHHHHH
Q 010842          487 MEGADRL  493 (499)
Q Consensus       487 ~~~~~~l  493 (499)
                      +++.++.
T Consensus       404 ~~~l~~~  410 (412)
T d1bw0a_         404 KAFCQRH  410 (412)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHhc
Confidence            9887654

>d1iaya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Tomato (Lycopersicon esculentum) [TaxId: 4081]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Tomato (Lycopersicon esculentum) [TaxId: 4081]

Probab=99.85  E-value=3.2e-20  Score=187.44  Aligned_cols=325  Identities=11%  Similarity=0.051  Sum_probs=212.0

Q ss_pred             cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh
Q 010842          121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST  200 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s  200 (499)
                      |....+..+|.+++.+|+.+.+|..-...   ....++|+|+++|+..++.+..+           ++..|+++.++|.+
T Consensus        79 Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~---~e~Ivit~G~~~al~~~~~~l~~-----------~Gd~Vlv~~P~y~~  144 (428)
T d1iaya_          79 FQDYHGLPEFRKAIAKFMEKTRGGRVRFD---PERVVMAGGATGANETIIFCLAD-----------PGDAFLVPSPYYPA  144 (428)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHHTTTCSCCC---TTSCEEEEHHHHHHHHHHHHHCC-----------TTCEEEEESSCCTT
T ss_pred             CcCCcchHHHHHHHHHHHHHHhCCCCCCC---hhhEEEcCCHHHHHHHHHHHhCC-----------CCCEEEEccCCchH
Confidence            44445678899999999999988531100   01468999999998887766532           57788899999999


Q ss_pred             HHHHHHH-hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhC
Q 010842          201 FAKVCKL-AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYG  276 (499)
Q Consensus       201 ~~ka~~~-~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~  276 (499)
                      +...+.. .|+   +++.|+++.+++|.+|+++++.+++...+.+.++.+|+++.++||||.+-+   +++|+++|++||
T Consensus       145 ~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~nP~NPtG~~~s~~~~~~i~~~a~~~~  221 (428)
T d1iaya_         145 FNRDLRWRTGV---QLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHN  221 (428)
T ss_dssp             HHHHTTTTTCC---EEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHhcCC---eEEEeecccccccccccccccchhhhhhccCCCceEEEEccCCCcccccccccccchhheeeccCc
Confidence            9888765 477   899999987778999999999999887777777888999999999999855   788999999999


Q ss_pred             CEEEeeccccchhccCccchhh---hc----CC--CCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCC
Q 010842          277 IWVHVDAAYAGSACICPEFRHY---LN----GI--ERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKN  346 (499)
Q Consensus       277 ~~lhvD~A~g~~~~~~~~~~~~---~~----g~--~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~  346 (499)
                      +++++|++|+.+.+..+.+...   ..    ..  ..-..+..+..|.++.| .-+|+++..++... +.......+...
T Consensus       222 ~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~GlRiG~~~~~~~~l~-~~~~~~~~~~~~  300 (428)
T d1iaya_         222 IHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVV-NCARKMSSFGLV  300 (428)
T ss_dssp             CEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHH-HHHHHHHTTSCC
T ss_pred             EEEEecccccccccCcccccccccccchhhccccccceEEEEecCCCcccCCCcccccccccccchh-hhhhhhhccccc
Confidence            9999999998765433222111   10    01  11235677899987655 56888877665432 222211111000


Q ss_pred             CCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh-c----HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEE
Q 010842          347 KPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY-G----VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVC  421 (499)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g----~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~  421 (499)
                                            ...........+ .    .+.+++..++..+.++.+.+.|+. +|+++..+.....++
T Consensus       301 ----------------------~~~~~~~~~a~l~~~~~~~~~~~~~~~~l~~r~~~~~~~L~~-~gi~~~~p~gg~f~w  357 (428)
T d1iaya_         301 ----------------------STQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEV-VGIKCLKNNAGLFCW  357 (428)
T ss_dssp             ----------------------CHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCBCCCSSSSEEE
T ss_pred             ----------------------ccccccchhhhhhhhccccccccccccccchhHHHHHHHHHh-CCCEEecCCcceEEE
Confidence                                  111111111111 1    233455556666777888888876 488876433333445


Q ss_pred             EEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeE--CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          422 FRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIV--GGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       422 f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~--~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      +.+.+..  ... ......++.++|.++ |+++..+..+  .+.+++|++++  ..++++|++.+++|++++.
T Consensus       358 ~~l~~~~--~~~-~~~~~~~l~~~Ll~~~gV~v~PG~~F~~~~~g~~Ris~a--~~~~~~l~~al~Rl~~~l~  425 (428)
T d1iaya_         358 MDLRPLL--RES-TFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA--NMDDGTVDIALARIRRFVG  425 (428)
T ss_dssp             EECGGGC--SSS-SHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS--SSCHHHHHHHHHHHHHHHH
T ss_pred             EECcccc--ccC-CCCCHHHHHHHHHHhCCEEEEcchhcCCCCCCEEEEEeC--CCCHHHHHHHHHHHHHHHh
Confidence            5554321  011 122234566777655 5444443333  34678999985  2467789999999988764

>d1m7ya_ c.67.1.4 (A:) 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) {Apple (Malus domestica) [TaxId: 3750]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 1-aminocyclopropane-1-carboxylate synthase (ACC synthase)
species: Apple (Malus domestica) [TaxId: 3750]

Probab=99.85  E-value=1.1e-19  Score=183.72  Aligned_cols=329  Identities=13%  Similarity=0.062  Sum_probs=215.2

Q ss_pred             cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh
Q 010842          121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST  200 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s  200 (499)
                      |....+..+|.+++.+|+.+.+|.+....   ....++|+|+|+|+..++.+..+           ++..|+++.+.|..
T Consensus        80 Y~~~~G~~~LR~aiA~~l~~~~~~~~~~~---pe~I~it~G~~~al~~~~~~l~~-----------pGd~Vlv~~P~y~~  145 (431)
T d1m7ya_          80 FQDYHGLPAFKKAMVDFMAEIRGNKVTFD---PNHLVLTAGATSANETFIFCLAD-----------PGEAVLIPTPYYPG  145 (431)
T ss_dssp             CCCTTCCHHHHHHHHHHHHHHTTTSSCCC---GGGEEEEEHHHHHHHHHHHHHCC-----------TTCEEEEEESCCTT
T ss_pred             CcCCcCcHHHHHHHHHHHHHHhCCCCCCC---cceEEECCCHHHHHHHHHHHhcC-----------CCCEEEEeCCCchh
Confidence            34445677899999999999988431100   02568999999998888776532           56788899999998


Q ss_pred             HHHHHHH-hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHhC
Q 010842          201 FAKVCKL-AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEYG  276 (499)
Q Consensus       201 ~~ka~~~-~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~~  276 (499)
                      +...+.. .|+   .++.|+++++++|.+|++++++++.+..+.+.++.+++.+.++||||.+   +.+++|+++|+++|
T Consensus       146 ~~~~~~~~~g~---~~v~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~nP~NPtG~~~s~~~l~~i~~~a~~~~  222 (431)
T d1m7ya_         146 FDRDLKWRTGV---EIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKG  222 (431)
T ss_dssp             HHHHTTTTTCC---EEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhcCc---eeccccccchhcccccHHHhhhhhhhhhhccCcceEEEecCccccccccccccccccccccccccC
Confidence            8888875 467   8999999877679999999999999988888888899999999999999   44788899999999


Q ss_pred             CEEEeeccccchhccCccchhhhc---CC------CC--CceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCC
Q 010842          277 IWVHVDAAYAGSACICPEFRHYLN---GI------ER--VDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYL  344 (499)
Q Consensus       277 ~~lhvD~A~g~~~~~~~~~~~~~~---g~------~~--aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl  344 (499)
                      +++++|++|+.+.+..+.+.....   ..      ..  --.+..+..|.++.| .-+|+++..++. +.........+.
T Consensus       223 ~~vI~De~Y~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~vi~~~s~SK~~~~~G~RiG~~~~~~~~-i~~~~~~~~~~~  301 (431)
T d1m7ya_         223 IHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDM-VVAAATKMSSFG  301 (431)
T ss_dssp             CEEEEECTTGGGCCSSSCCCCHHHHTTTTTCSSSSSGGGGEEEEEESSSSSCCGGGCEEEEEESCHH-HHHHHHHHGGGS
T ss_pred             cceeecccccccccCCCCCCCHHHHhhhcccccccccCceEEEEecCcccccCCCCccceeccchhh-hHHHHHHHhccc
Confidence            999999999876543322221111   00      00  125567899999866 558888776543 222221111111


Q ss_pred             CCCCCCCCCcccCCCcccCCCCCCCcHHHHHH-H--HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEE
Q 010842          345 KNKPSESNSVVDFKDWQVGTGRRFKSLRLWMV-L--RSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVC  421 (499)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~-l--~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~  421 (499)
                      ..                    ......+..+ +  .....+.+.+..++..+..+.+.+.|++ +|+++..+.....++
T Consensus       302 ~~--------------------~~~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~gi~~~~p~gg~f~w  360 (431)
T d1m7ya_         302 LV--------------------SSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQK-SGISCLNGNAGLFCW  360 (431)
T ss_dssp             CC--------------------CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTCEECCCCSSSEEE
T ss_pred             cc--------------------cccccchhhhhhccchhhhhhhhhhhhhhhhhhhhhhhhhhc-CCcEEecCCceeEEE
Confidence            00                    0001111111 1  1112344556666667777888888876 589887443333444


Q ss_pred             EEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          422 FRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       422 f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      +++...-  .. .......++.++|.++ |..+..+..+.  +.+++|++++  ..+++++++.+++|+++.++.
T Consensus       361 ~~l~~~~--~~-~~~~~~~~l~~~ll~~~gV~v~PG~~F~~~~~~~~Ri~~a--~~~e~~l~~al~rL~~~l~~~  430 (431)
T d1m7ya_         361 VDMRHLL--RS-NTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFA--NLPERTLDLAMQRLKAFVGEY  430 (431)
T ss_dssp             EECGGGS--SS-SSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECS--SSCHHHHHHHHHHHHHHHHHH
T ss_pred             EECcccc--cc-CcccCHHHHHHHHHHHCCEEEEeccccCCCCCCEEEEEeC--cCCHHHHHHHHHHHHHHHHHh
Confidence            5554311  00 0122234566776654 64444443332  3568999985  246788999999999987763

>d1m6sa_ c.67.1.1 (A:) Low-specificity threonine aldolase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Thermotoga maritima [TaxId: 2336]

Probab=99.84  E-value=4.4e-21  Score=186.68  Aligned_cols=312  Identities=14%  Similarity=0.078  Sum_probs=191.3

Q ss_pred             CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC
Q 010842          118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT  197 (499)
Q Consensus       118 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~  197 (499)
                      ...|...|...+||++    +++++|.+.         +++++|||+||+.++.+++.           ++..+++....
T Consensus        27 ~~~yg~~p~~~~le~~----lA~~~G~~~---------~~~~~sGt~A~~~al~a~~~-----------~g~~~~~~~~~   82 (343)
T d1m6sa_          27 DDVYGEDPTINELERL----AAETFGKEA---------ALFVPSGTMGNQVSIMAHTQ-----------RGDEVILEADS   82 (343)
T ss_dssp             CGGGTCCHHHHHHHHH----HHHHTTCSE---------EEEESCHHHHHHHHHHHHCC-----------TTCEEEEETTC
T ss_pred             CcccCCCHHHHHHHHH----HHHHHCCCe---------EEEeCCHHHHHHHHHHHHhc-----------cCCceeccccc
Confidence            3456778988888887    899999865         38999999999999987754           45566677778


Q ss_pred             chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEe-cCCCccccc---CChhHHHHHHH
Q 010842          198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCAT-VGTTSTTAV---DNVEPLAEVAN  273 (499)
Q Consensus       198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t-~gtt~~G~i---d~l~~I~~ia~  273 (499)
                      |+++.......+.+...++.++.+   .+..|++.+++.+...+.....+..++.+ ..+++.|.+   +++.+|+++|+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~  159 (343)
T d1m6sa_          83 HIFWYEVGAMAVLSGVMPHPVPGK---NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAK  159 (343)
T ss_dssp             HHHHSSTTHHHHHTCCEEEEECEE---TTEECHHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHH
T ss_pred             cceeeecccccccccceeeccccc---cCccCHHHHHHhhhhhhcccccccccccccccccCCceecCHHHHHHHHHHHH
Confidence            887665444333322245555543   24789999999998776655544444444 445555655   45667788889


Q ss_pred             HhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842          274 EYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNS  353 (499)
Q Consensus       274 ~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~  353 (499)
                      ++|+++|+|++++++......... .......+..+++.+|.++...+.+++..++.........  ..+ ..       
T Consensus       160 ~~g~~~~~D~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~-~~-------  228 (343)
T d1m6sa_         160 EHGINVHIDGARIFNASIASGVPV-KEYAGYADSVMFCLSKGLCAPVGSVVVGDRDFIERARKAR--KML-GG-------  228 (343)
T ss_dssp             HHTCEEEEEETTHHHHHHHHCCCH-HHHHHTCSEEEEESSSTTCCSSCEEEEECHHHHHHHHHHH--HHH-TC-------
T ss_pred             hcCeEEEeccccccccccccccch-hhhccccccccccccccccccccccccccHHHHhhhHhhC--ccc-cc-------
Confidence            999999999999876432211111 1111236778888888887665555444333211111110  000 00       


Q ss_pred             cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcc
Q 010842          354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSA  433 (499)
Q Consensus       354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~  433 (499)
                               ...........+.........    ..+...++++++.+.+.++.+.....+...+.+++.+.+..     
T Consensus       229 ---------~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-----  290 (343)
T d1m6sa_         229 ---------GMRQAGVLAAAGIIALTKMVD----RLKEDHENARFLALKLKEIGYSVNPEDVKTNMVILRTDNLK-----  290 (343)
T ss_dssp             ---------CCSSTHHHHHHHHHHHHHSST----THHHHHHHHHHHHHHHHHHTCBCCGGGCCSSEEEEECTTSS-----
T ss_pred             ---------ccchhHHHHHhhhhhhhhhHH----HHHHHHHHHHHhhhHHHHhccCccCCCCCceEEEEEeCCCc-----
Confidence                     000000111222222221222    23334455556666666665555555566778888775432     


Q ss_pred             hhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          434 DTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       434 ~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                         ....++.++|.++|+.+ .+.   +...+|+++ ++.+|+||||+++++|+++.+++
T Consensus       291 ---~~a~~l~~~L~~~Gi~v-~~~---~~~~iRi~~-~~~~t~edid~~v~~l~~v~~~~  342 (343)
T d1m6sa_         291 ---VNAHGFIEALRNSGVLA-NAV---SDTEIRLVT-HKDVSRNDIEEALNIFEKLFRKF  342 (343)
T ss_dssp             ---SCHHHHHHHHHHHTEEC-EEE---ETTEEEEEC-CTTSCHHHHHHHHHHHHHHHHHH
T ss_pred             ---ccHHHHHHHHHHCCCEE-ecC---CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHh
Confidence               11457888888889543 322   234699998 58899999999999999999886

>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Subgroup IV putative aspartate aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.84  E-value=3e-19  Score=174.72  Aligned_cols=334  Identities=14%  Similarity=0.048  Sum_probs=210.3

Q ss_pred             cCCCCCChHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHH
Q 010842           95 FFPATVSTAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAAR  174 (499)
Q Consensus        95 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar  174 (499)
                      +.|++...+..+-+.+..   +. .++ .++...++.+++.+.++++++.+..       -.++++|||.|+-+++....
T Consensus         4 ~~PGP~~v~~~V~~am~~---~~-~~h-r~~~f~~i~~~~~~~l~~ll~~~~~-------~i~~~gsgT~a~e~~~~nl~   71 (348)
T d1iuga_           4 LTPGPVRLHPKALEALAR---PQ-LHH-RTEAAREVFLKARGLLREAFRTEGE-------VLILTGSGTLAMEALVKNLF   71 (348)
T ss_dssp             CSSSSCCCCHHHHHHHHS---CC-CCT-TSHHHHHHHHHHHHHHHHHHTCSSE-------EEEEESCHHHHHHHHHHHHC
T ss_pred             cCCCCCCCCHHHHHHhcC---CC-CCC-CCHHHHHHHHHHHHHHHHHhCCCCC-------EEEEeCchHHHHHHHHHhcc
Confidence            567766655544443322   21 111 3567788888999999999998654       25889999998766665543


Q ss_pred             HHHHhHhhhhccCCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEE
Q 010842          175 DRALDAVGAENMHKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCA  252 (499)
Q Consensus       175 ~~~~~~~~~~g~~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~  252 (499)
                      .           ++..+++....+++  +.+.++.+|.   ++..++.+...  ..+++++.         ...+..|+.
T Consensus        72 ~-----------~g~~vlv~~~G~f~~~~~~~a~~~~~---~~~~~~~~~g~--~~~~~~~~---------~~~~~~v~~  126 (348)
T d1iuga_          72 A-----------PGERVLVPVYGKFSERFYEIALEAGL---VVERLDYPYGD--TPRPEDVA---------KEGYAGLLL  126 (348)
T ss_dssp             C-----------TTCEEEEEECSHHHHHHHHHHHHTTC---EEEEEECCTTC--CCCTTTSC---------CSSCSEEEE
T ss_pred             c-----------ccccceeecchHHHHHHHHHHHhcCc---ccccccccCCC--cccccccc---------ccCCCeeEE
Confidence            2           33345555557665  6666778888   88888775432  33433321         123447999


Q ss_pred             ecCCCcccccCChhHHHHHHHHhC--CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCc
Q 010842          253 TVGTTSTTAVDNVEPLAEVANEYG--IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQP  330 (499)
Q Consensus       253 t~gtt~~G~id~l~~I~~ia~~~~--~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~  330 (499)
                      ++.+|++|.+.|+++|+++|++++  .+++||++.+.+....+--.      .++|.+.+++|||+++|.|.|+++++++
T Consensus       127 ~h~eTstG~~~~i~~i~~~~~~~~~~~l~~vDavss~g~~~i~~d~------~~iD~~~~~sqK~l~gppG~~~v~~s~~  200 (348)
T d1iuga_         127 VHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEA------MGVDAAASGSQKGLMCPPGLGFVALSPR  200 (348)
T ss_dssp             ESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGG------GTCSEEEEESSSTTCCCSCEEEEEECHH
T ss_pred             EecchhhhhhccHHHHHHHHHhhhccceeechhhhccccccccccc------ccCCEEEeccccceecCCceeeeeechH
Confidence            999999999999999999999985  79999997765544332111      1399999999999999999999999876


Q ss_pred             hhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC-c----HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 010842          331 GLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK-S----LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKS  405 (499)
Q Consensus       331 ~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-a----l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~  405 (499)
                      . + +.......|+.-..        +..+.-...+++. +    ..+-.+|+.+-.++ .+..++.....+.+++.++.
T Consensus       201 ~-l-e~~~~~~~~~dl~~--------~~~~~~~~~~~~Tp~v~~i~~l~~aL~~~~~~~-~~~~~~~~~~~~~~~~~~~~  269 (348)
T d1iuga_         201 A-L-ERLKPRGYYLDLAR--------ELKAQKEGESAWTPAINLVLAVAAVLEEVLPRL-EEHLALKAWQNALLYGVGEE  269 (348)
T ss_dssp             H-H-HTCCCCSSTTCHHH--------HHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGH-HHHHHHHHHHHHHHHHHHHH
T ss_pred             H-H-hhhcccccccchhh--------hhhhhccCcccccccchHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHhhhhhh
Confidence            4 2 22322223332110        0000011122222 1    23344554443343 44444444455556665555


Q ss_pred             CCCeEEEcCCCc-eEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEe-eeECCEEEEEEeccCCCCcHHHHHHHH
Q 010842          406 DPRFEIVVPRHF-ALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTH-TIVGGLYMLRFAVGASLTDERHVVAAW  483 (499)
Q Consensus       406 ~~~~~~~~~~~~-~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~~~g~~~lRi~~~~~~~t~~di~~l~  483 (499)
                      . +++++.+..+ .+++|+++..-       +  ..++.+.|.++|.++.++ ..+.+ ..+||+.+ ..++.+|++.++
T Consensus       270 ~-gl~~~~~~~s~~v~~~~~P~g~-------~--~~~~~~~l~~~gi~i~~G~~~l~~-~~~RIg~m-G~~~~~d~~~~~  337 (348)
T d1iuga_         270 G-GLRPVPKRFSPAVAAFYLPEGV-------P--YARVKEAFAQRGAVIAGGQGPLKG-KVFRLSLM-GAYDRYEALGVA  337 (348)
T ss_dssp             T-TCEESCSSBCTTCEEEECCTTC-------C--HHHHHHHHHTTTEECEECCGGGTT-TEEEECCC-SSCCHHHHHHHH
T ss_pred             h-hhccChhhcCCeEEEEECCCCC-------C--HHHHHHHHHHCCeEEEcCccccCC-CEEEEeCC-CCCCHHHHHHHH
Confidence            4 7887654333 35778774311       1  356778888888543222 22334 36999987 568899999999


Q ss_pred             HHHHHHHHHHh
Q 010842          484 ELIMEGADRLF  494 (499)
Q Consensus       484 ~~l~~~~~~l~  494 (499)
                      ++|+++.++++
T Consensus       338 ~~l~~~l~~~~  348 (348)
T d1iuga_         338 GMFREVLEEIL  348 (348)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHhC
Confidence            99999998864

>d1v2da_ c.67.1.1 (A:) Glutamine aminotransferase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Glutamine aminotransferase
species: Thermus thermophilus [TaxId: 274]

Probab=99.83  E-value=2.1e-19  Score=177.80  Aligned_cols=318  Identities=14%  Similarity=0.048  Sum_probs=203.9

Q ss_pred             HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      |..+-+.+...+.. ...|....+..+++++    +++.++.+.+       ..++|+|+++++..++.+...       
T Consensus        40 p~~i~~al~~~l~~-~~~Y~~~~G~~elr~a----iA~~~~~~~~-------~Iiit~G~~~al~~~~~~l~~-------  100 (368)
T d1v2da_          40 PPFLLEAVRRALGR-QDQYAPPAGLPALREA----LAEEFAVEPE-------SVVVTSGATEALYVLLQSLVG-------  100 (368)
T ss_dssp             CHHHHHHHHHHTTT-SCSCCCTTCCHHHHHH----HHHHHTSCGG-------GEEEESSHHHHHHHHHHHHCC-------
T ss_pred             CHHHHHHHHHHhhc-ccCCCCCcCCHHHHHH----HHhhcccCCc-------ceeeccchHHHHHHHhhcccc-------
Confidence            34455556666643 2456666677777776    6666788765       579999999999888776532       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC-CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV-DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                          ++..|+++.++|..+...++..|.   .++.++++. .+.+.+|++.|++++++.+      .+++.+.++||||.
T Consensus       101 ----~~d~v~~~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~i~~~~p~NPtG~  167 (368)
T d1v2da_         101 ----PGDEVVVLEPFFDVYLPDAFLAGA---KARLVRLDLTPEGFRLDLSALEKALTPRT------RALLLNTPMNPTGL  167 (368)
T ss_dssp             ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEEETTEEECCHHHHHTTCCTTE------EEEEEESSCTTTCC
T ss_pred             ----ccccccccCCcchhhhhHHHhcCC---ccceeccccccccccCCHHHHHHhhccCc------eEEEEcCCCCcccc
Confidence                466788888999999999999999   888888753 2347899999999986643      37888999999999


Q ss_pred             cCC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhh
Q 010842          262 VDN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKAL  337 (499)
Q Consensus       262 id~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~  337 (499)
                      +-+   +++|+++|++||+++++|++|+......+....... ......+..+..|..+.| .-+|++...+. ......
T Consensus       168 ~~~~~~l~~l~~~a~~~~i~ii~D~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~sk~~~~~G~R~g~~~~~~~-~~~~~~  245 (368)
T d1v2da_         168 VFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREF-APERTFTVGSAGKRLEATGYRVGWIVGPKE-FMPRLA  245 (368)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHH-CTTTEEEEEEHHHHTTCGGGCCEEEECCTT-THHHHH
T ss_pred             cCCHHHHHHHHHHHHHcCCeeeechhhhhhcccccccccccc-cccccceeeccccccccccccccccccccc-ccchhh
Confidence            965   788999999999999999998765432222111111 112334445555554444 55787766543 221111


Q ss_pred             cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC
Q 010842          338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG-VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH  416 (499)
Q Consensus       338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~  416 (499)
                      .....+...                  +.......+..++.... .+.++...+...++++++.+.|++. |+++..+..
T Consensus       246 ~~~~~~~~~------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~p~g  306 (368)
T d1v2da_         246 GMRQWTSFS------------------APTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM-GLRVYVPEG  306 (368)
T ss_dssp             HHHHHHTSS------------------CCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT-TCCEECCSB
T ss_pred             hhhhccccc------------------cccccccccccccccccchhhHHHHHHHHHHhhhhhhhhHHhc-CcEEecCCc
Confidence            111000000                  00000011112222211 2356667777788888999999987 888775544


Q ss_pred             ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC----CEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG----GLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      ...+++.+....          ..   +.+.+.|+.+..+..+.    +++++|++++   +++++|++.+++|+++
T Consensus       307 ~~~~~~~l~~~~----------~~---~ll~~~gI~v~pg~~F~~~~~~~~~iRis~~---~~~e~i~~ai~rL~~~  367 (368)
T d1v2da_         307 TYFLMAELPGWD----------AF---RLVEEARVALIPASAFYLEDPPKDLFRFAFC---KTEEELHLALERLGRV  367 (368)
T ss_dssp             SSEEEEECTTCC----------HH---HHHHHTCEECEEGGGGCSSSCCTTEEEEECC---SCHHHHHHHHHHHHHH
T ss_pred             eeEEEEeCCccH----------HH---HHHHhCCEEEEechhhCCCCCCCCEEEEEec---CCHHHHHHHHHHHHHh
Confidence            555666664322          12   23445676554443332    4578999986   5789999999999875

>d1c7na_ c.67.1.3 (A:) Cystalysin {Treponema denticola [TaxId: 158]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystalysin
species: Treponema denticola [TaxId: 158]

Probab=99.83  E-value=4.3e-19  Score=177.17  Aligned_cols=333  Identities=11%  Similarity=0.059  Sum_probs=216.2

Q ss_pred             HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      |..+.+.+...++.+...|..+  ..++.+++.+|+.+.+|++.+.     ...++|+|+++|+..++.+..+       
T Consensus        46 p~~v~~al~~~~~~~~~~Y~~g--~~~Lr~aia~~~~~~~g~~~~~-----~~I~vt~G~~~al~~~~~~~~~-------  111 (394)
T d1c7na_          46 PPELIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQT-----DWIINTAGVVPAVFNAVREFTK-------  111 (394)
T ss_dssp             CHHHHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCCG-----GGEEEESSHHHHHHHHHHHHCC-------
T ss_pred             CHHHHHHHHHHHhCCCcCCCCC--CHHHHHHHHHHHHHhcCCCCCC-----cceEeeccchhhhhhhhccccc-------
Confidence            4445566666665544556543  4689999999999999985331     2578999999999888887633       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCC-CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSV-DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~-~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                          ++..|++....++.........|.   ..+.++... ++.+.+|.+.++..+...     .+.+++.+.++||||.
T Consensus       112 ----pgd~vi~~~p~~~~~~~~~~~~g~---~~v~~~~~~~~~~~~~d~~~~~~~~~~~-----~~~~i~l~~P~NPTG~  179 (394)
T d1c7na_         112 ----PGDGVIIITPVYYPFFMAIKNQER---KIIECELLEKDGYYTIDFQKLEKLSKDK-----NNKALLFCSPHNPVGR  179 (394)
T ss_dssp             ----TTCEEEECSSCCTHHHHHHHTTTC---EEEECCCEEETTEEECCHHHHHHHHTCT-----TEEEEEEESSBTTTTB
T ss_pred             ----cccccccccCcccchhhHHhhhhh---cccccccccccccccchhhhhhhhhccc-----cceEEEecccccccce
Confidence                677788888899999999999999   888887653 344778999888876422     2447888999999999


Q ss_pred             c---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhc---CCCCCceeEecccccccCC-CcceEEEEeCchhHH
Q 010842          262 V---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN---GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLV  334 (499)
Q Consensus       262 i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~---g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~  334 (499)
                      +   +.+++|+++|+++++|+++|.+|..+.+..+.......   .....-.++.+..|.++.| ..+|.+++.++... 
T Consensus       180 v~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~R~g~~~~~~~~i~-  258 (394)
T d1c7na_         180 VWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNPDIR-  258 (394)
T ss_dssp             CCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHHH-
T ss_pred             eccHHHhhhhhccccccceeEeccccccccccCCccccchhhhhcccccceeecccccccccccccccccccccChhhh-
Confidence            9   45778899999999999999999876543222111111   1112335566788988755 66788888775432 


Q ss_pred             HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHH--HHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEE
Q 010842          335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMV--LRSYGVLNLQSHIRSDIRLAKMFEGFVKS-DPRFEI  411 (499)
Q Consensus       335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~--l~~~g~~g~~~~~~~~~~~a~~l~~~L~~-~~~~~~  411 (499)
                      +.+.....+....                   .......-++  ......+..++..+...+..+.+.+.++. .++++.
T Consensus       259 ~~~~~~~~~~~~~-------------------~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  319 (394)
T d1c7na_         259 ERFTKSRDATSGM-------------------PFTTLGYKACEICYKECGKWLDGCIKVIDKNQRIVKDFFEVNHPEIKA  319 (394)
T ss_dssp             HHHHHHHHHTTCC-------------------CCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCTTSBC
T ss_pred             hhhhhhhhhcccc-------------------ccccccchhhhhhhcchhhhhcccccccchhhhhhhhhhhccccceee
Confidence            2222111111110                   0011111111  22224556667777677777777777764 456654


Q ss_pred             EcCCCce-EEEEEecCCCCCCcchhHHHHHHHHHHHHhc-CCEEEEeeeEC--CEEEEEEeccCCCCcHHHHHHHHHHHH
Q 010842          412 VVPRHFA-LVCFRLNPYPHSGSADTEMLNRKLLDWVNST-GRVYLTHTIVG--GLYMLRFAVGASLTDERHVVAAWELIM  487 (499)
Q Consensus       412 ~~~~~~~-~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lRi~~~~~~~t~~di~~l~~~l~  487 (499)
                      . .|+.+ .+.+++....        ....++.++|.++ |+++..+..+.  +.+++|++++   +++++|++.+++|+
T Consensus       320 ~-~p~g~~~~~~~~~~~~--------~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~~~iRis~~---~~~e~i~eal~rl~  387 (394)
T d1c7na_         320 P-LIEGTYLQWIDFRALK--------MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLA---APSSVIQESLERLN  387 (394)
T ss_dssp             C-CCSBSSEEEEECGGGC--------CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECC---SCHHHHHHHHHHHH
T ss_pred             c-CCCceeEEEEECCCCC--------CCHHHHHHHHHHhCCEEEEcchhhCCCCCCEEEEEEe---CCHHHHHHHHHHHH
Confidence            4 34433 3444554311        0145566776655 76555554442  3568999986   57889999999999


Q ss_pred             HHHHHH
Q 010842          488 EGADRL  493 (499)
Q Consensus       488 ~~~~~l  493 (499)
                      ++.++|
T Consensus       388 ~~l~~L  393 (394)
T d1c7na_         388 KALKDL  393 (394)
T ss_dssp             HHHHHH
T ss_pred             HHHHhc
Confidence            998876

>d1svva_ c.67.1.1 (A:) Low-specificity threonine aldolase {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Low-specificity threonine aldolase
species: Leishmania major [TaxId: 5664]

Probab=99.82  E-value=2.2e-19  Score=172.86  Aligned_cols=323  Identities=13%  Similarity=0.069  Sum_probs=197.0

Q ss_pred             hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      .|.++ +.+..........|..    .+..+++++.+++++|.+..       .++||+|||+||..++.....      
T Consensus        13 ~P~v~-eAl~~~~~~~~~~y~~----~~~~~~lr~~ia~~~g~~~~-------~v~~tsggtean~~a~~~~~~------   74 (340)
T d1svva_          13 HPKIL-DLMARDNMTQHAGYGQ----DSHCAKAARLIGELLERPDA-------DVHFISGGTQTNLIACSLALR------   74 (340)
T ss_dssp             CHHHH-HHHHHHTTCCCCSTTC----SHHHHHHHHHHHHHHTCTTS-------EEEEESCHHHHHHHHHHHHCC------
T ss_pred             CHHHH-HHHHHHhhcCCCCCCC----CHHHHHHHHHHHHHhCCCcc-------eEEEcCCHHHHHHHHHHHHhh------
Confidence            45544 4444433322333433    44556677779999999765       479999999999998887643      


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                           ++..+.+....|.++.......+.+. ....++...   ...+.+...............+..++....+++.|.
T Consensus        75 -----~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (340)
T d1svva_          75 -----PWEAVIATQLGHISTHETGAIEATGH-KVVTAPCPD---GKLRVADIESALHENRSEHMVIPKLVYISNTTEVGT  145 (340)
T ss_dssp             -----TTEEEEEETTSHHHHSSTTHHHHTTC-CEEEECCTT---SCCCHHHHHHHHHHSCSTTSCEEEEEEEESSCTTSC
T ss_pred             -----hccccccccccceeeeecccccccce-eeeeccccc---ccccchhHHHHhhhhhcccCCcceeeeecccccccc
Confidence                 45667778888888776655554422 222332221   245666666665554444444555666666666666


Q ss_pred             c---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhh-cCCCCCceeEecccccccCCCcceEEEEeCchhHHHhh
Q 010842          262 V---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL-NGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKAL  337 (499)
Q Consensus       262 i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~-~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~  337 (499)
                      +   +++..+.++|+++|.++|+|+++++.....+...... ......+...+.+.|.+..+.  +..............
T Consensus       146 ~~~~~~~~~~~~~~~~~g~~~~~d~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  223 (340)
T d1svva_         146 QYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFG--EALIILNDALKPNAR  223 (340)
T ss_dssp             CCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTCSSC--EEEEECSGGGCTTHH
T ss_pred             cccHHHhhhhhcccccccceeeeeccceeeeecccccccccccccccceeeecCCcccccccc--ccccccchhhhhhhh
Confidence            6   4566778899999999999999987655433211100 001124567777777665543  233222221110000


Q ss_pred             cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHH-HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC
Q 010842          338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVL-RSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH  416 (499)
Q Consensus       338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l-~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~  416 (499)
                      ..    .                ....+....+..++++. ..+.........++...+++++.+.|+.. |++++.++.
T Consensus       224 ~~----~----------------~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~p~~  282 (340)
T d1svva_         224 HL----I----------------KQRGALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGLEAC-GIRLAWPSA  282 (340)
T ss_dssp             HH----H----------------HHTTCCCTTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCCS
T ss_pred             hh----c----------------ccccCccchhhHHHHHHHHHhhhhHHHHHHHHHHHHHhhhHHHHhcC-CCeeecCCC
Confidence            00    0                00011111222333333 33445667778888889999999999885 898887777


Q ss_pred             ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      .+++.+.+.+              ...++|.+++.+...++...+..++|+|+ ++.+|++|||+++++|+++
T Consensus       283 ~~~v~~~~~~--------------~~~~~l~~~~~~~~~~~~~~~~~~vR~s~-~~~~t~edid~~l~~l~~l  340 (340)
T d1svva_         283 SNQLFPILEN--------------TMIAELNNDFDMYTVEPLKDGTCIMRLCT-SWATEEKECHRFVEVLKRL  340 (340)
T ss_dssp             SSEECBEEEH--------------HHHHHHTTTEECEEEEEETTTEEEEEEEC-CTTCCHHHHHHHHHHHHHC
T ss_pred             ceEEEEeCCH--------------HHHHHHHHhhhhhcccccCCCCcEEEEEC-CCCCCHHHHHHHHHHHhcC
Confidence            8877666532              23455556665444555567889999998 5999999999999999873

>d1vp4a_ c.67.1.1 (A:) Putative aminotransferase TM1131 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative aminotransferase TM1131
species: Thermotoga maritima [TaxId: 2336]

Probab=99.81  E-value=1.2e-18  Score=175.45  Aligned_cols=339  Identities=11%  Similarity=0.076  Sum_probs=216.5

Q ss_pred             HHHHHHHHHHHcccC---CcccccChhhHHHHHHHHHHHHHHcCCCC-ccccCCCccEEEcCChHHHHHHHHHHHHHHHH
Q 010842          103 AGFLGEMLCACFNSV---GFNWLASPASTELEIVVMDWLATMLKLPK-TFMFSGTGGGVIQNTTSDSILVTLIAARDRAL  178 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~~-~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~  178 (499)
                      ...+.+.+...+...   ...|....+..++.+++.+|+.+..|.+. +.     ...++|+|+++|+..++.+..+   
T Consensus        55 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~-----~~I~it~G~~~al~~~~~~~~~---  126 (420)
T d1vp4a_          55 RKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDE-----DNLIFTVGSQQALDLIGKLFLD---  126 (420)
T ss_dssp             HHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCG-----GGEEEEEHHHHHHHHHHHHHCC---
T ss_pred             HHHHHHHHHHHHhhCCccccCCCCCcCCHHHHHHHHHHHHHHhCCCCCCH-----HHeEeccchhhhHHHHHHhhhc---
Confidence            445556555554332   23577777889999999999999998752 11     2578999999998877766432   


Q ss_pred             hHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCC---ccEEEEEecC
Q 010842          179 DAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGL---VPLFLCATVG  255 (499)
Q Consensus       179 ~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~---~p~~vv~t~g  255 (499)
                              ++..|+++.+.+..+...++..|.   +++.+|.+++   .+|++.++..+.+......   ...+++.+.+
T Consensus       127 --------~Gd~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~p  192 (420)
T d1vp4a_         127 --------DESYCVLDDPAYLGAINAFRQYLA---NFVVVPLEDD---GMDLNVLERKLSEFDKNGKIKQVKFIYVVSNF  192 (420)
T ss_dssp             --------TTCEEEEEESCCHHHHHHHHTTTC---EEEEEEEETT---EECHHHHHHHHHHHHHTTCGGGEEEEEEECSS
T ss_pred             --------cccccccccccccchhHHHHHHhh---hccccccccc---ccccchhhhhhhhhHHHhhccccceeeEecCC
Confidence                    577888999999999999999999   9999998854   6899999998877554432   2345566778


Q ss_pred             CCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCccchhh-hcCCCCCceeEecccccccCCCcceEEEEeCch
Q 010842          256 TTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY-LNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPG  331 (499)
Q Consensus       256 tt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~-~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~  331 (499)
                      +||||.+   +.+++|+++|++|++++++|.+|..+.+..+..... ...-...-.+..++.|++....-+|+++..+ .
T Consensus       193 ~NPtG~~~s~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~s~sk~~~~G~RiG~~~~~~-~  271 (420)
T d1vp4a_         193 HNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLAPGLRIGMVAGSK-E  271 (420)
T ss_dssp             CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTCGGGCEEEEECCH-H
T ss_pred             CCccchhhhhhhhhhhhhhhhcccccccccchhhhccccCcccccccccccccceeEEeccccccccccccccccccc-h
Confidence            8999998   557899999999999999999998764432222111 1111223455667888887667789877643 3


Q ss_pred             hHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhc----HHHHHHHHHHHH----HHHHHHHHHH
Q 010842          332 LLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYG----VLNLQSHIRSDI----RLAKMFEGFV  403 (499)
Q Consensus       332 ~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g----~~g~~~~~~~~~----~~a~~l~~~L  403 (499)
                      .+ +.+.........                    ........++...+.    .+.+++..+...    .+.+.|.+.+
T Consensus       272 ~i-~~l~~~~~~~~~--------------------~~~~~~q~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~  330 (420)
T d1vp4a_         272 FI-RKIVQAKQSADL--------------------CSPAITHRLAARYLERYDLLEQLKPTIELYRRKRTVMLNALEEYF  330 (420)
T ss_dssp             HH-HHHHHHHHHHHS--------------------SCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             hh-hhhhhhhhhccc--------------------cCchhhhhhhhhhcccccccccchhHHHHhhhhcccchhhhhhhh
Confidence            33 222111011000                    001222222222211    222333333333    3444555555


Q ss_pred             hcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC----CEEEEEEeccCCCCcHHHH
Q 010842          404 KSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG----GLYMLRFAVGASLTDERHV  479 (499)
Q Consensus       404 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~----g~~~lRi~~~~~~~t~~di  479 (499)
                      .+.|++++..+.....+++++....  +       ..++.+.|.+.|+.+..+..+.    +..++|++++  ..+++++
T Consensus       331 ~~~~g~~~~~p~gg~f~~~~~~~~~--d-------~~~~~~~l~~~gV~v~PG~~F~~~~~~~~~iRls~~--~~~~e~l  399 (420)
T d1vp4a_         331 SDIPGVKWVKSEGGLFIWLTLPEGF--D-------TWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSFC--LPPDEKI  399 (420)
T ss_dssp             TTSTTCEECCCSBSSEEEEECCTTC--C-------TTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEECS--SSCHHHH
T ss_pred             ccCCCcEEecCCceEEEEEECCCCC--C-------HHHHHHHHHHCCeEEEechhhCCCCCCCCEEEEEeC--cCCHHHH
Confidence            6678998764433345555654311  1       1234556667787665554442    2468999985  2578899


Q ss_pred             HHHHHHHHHHHHHHhcc
Q 010842          480 VAAWELIMEGADRLFKG  496 (499)
Q Consensus       480 ~~l~~~l~~~~~~l~~~  496 (499)
                      ++.+++|++++++..++
T Consensus       400 ~~a~~rL~~~l~~~~~~  416 (420)
T d1vp4a_         400 VEGIKRLREVVLEYGKE  416 (420)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhHh
Confidence            99999999999887654

>d1o4sa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Thermotoga maritima [TaxId: 2336]

Probab=99.81  E-value=8.6e-19  Score=173.73  Aligned_cols=326  Identities=11%  Similarity=0.033  Sum_probs=216.6

Q ss_pred             HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      |..+-+.+...++.....|....+..++.+++.+|+.+..|.+.+.     ...++|+|+++|+..++.+..+       
T Consensus        43 p~~i~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~-----~~i~~t~G~~~al~~~~~~l~~-------  110 (375)
T d1o4sa_          43 PEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISP-----DQVVVTNGAKQALFNAFMALLD-------  110 (375)
T ss_dssp             CHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCG-----GGEEEESHHHHHHHHHHHHHCC-------
T ss_pred             CHHHHHHHHHHHhcCCcCCCCCcCCHHHHHHHHhhhhhcccccccc-----ccccccCcHHHHHHHHHHHHhC-------
Confidence            3445555666565545568777788999999999999998875432     2578999999988877776643       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|+++.++++.+...+...|.   .+..++.++++.+.+|.+.++......      +.+++.+.++||||.+
T Consensus       111 ----~gd~vlv~~P~y~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~nP~NPTG~~  177 (375)
T d1o4sa_         111 ----PGDEVIVFSPVWVSYIPQIILAGG---TVNVVETFMSKNFQPSLEEVEGLLVGK------TKAVLINSPNNPTGVV  177 (375)
T ss_dssp             ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECCGGGTTCCCHHHHHHTCCTT------EEEEEEESSCTTTCCC
T ss_pred             ----CCCEEEEccCccccchhhhhcccc---ccccccccccccccchhHHHHHhhccC------ccEEEEeCCCCCccCC
Confidence                566788888899999999999999   889988887777899999888765443      3478899999999999


Q ss_pred             ---CChhHHHHHHHHhCCEEEeeccccchhccCccchhh-hcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhh
Q 010842          263 ---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY-LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKAL  337 (499)
Q Consensus       263 ---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~-~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~  337 (499)
                         +.+++|+++|++|++|++.|.+|+......+..... ..+...--.+..+..|.++.| .-+|++...+.. .....
T Consensus       178 ~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~G~R~G~~~~~~~~-~~~~~  256 (375)
T d1o4sa_         178 YRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGWRVGYLISSEKV-ATAVS  256 (375)
T ss_dssp             CCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTCGGGCCEEEECCHHH-HHHHH
T ss_pred             CCHHHHHHHHHhHHHcCCceehHhhhccccccccccccccccCCCCCEEEEeechhhccCCccccccccccccc-hhhhh
Confidence               557788889999999999999987654322111111 111112235677889988755 678888765542 21111


Q ss_pred             cCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCc
Q 010842          338 STDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHF  417 (499)
Q Consensus       338 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~  417 (499)
                      ........                     .............+ ........+...+.++.+.+.|++. ++++..+...
T Consensus       257 ~~~~~~~~---------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~r~~~~~~~l~~~-g~~~~~p~gg  313 (375)
T d1o4sa_         257 KIQSHTTS---------------------CINTVAQYAALKAL-EVDNSYMVQTFKERKNFVVERLKKM-GVKFVEPEGA  313 (375)
T ss_dssp             HHHHHHTC---------------------SCCHHHHHHHHHHT-TCCCHHHHHHHHHHHHHHHHHHHHT-TCCCCCCSBS
T ss_pred             hhhccccc---------------------cccccchhhhhhhc-ccchhhhHHHHHHHHHHHHHHHHhc-CceEecCCcc
Confidence            11100000                     00122222222222 2333444556666777888888876 7876533333


Q ss_pred             eEEEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      ..+++.+...           ..++..++. +.|+++..+..+...+++|++++   +++++|++.+++|+++.+
T Consensus       314 ~f~~~~~~~~-----------~~~~~~~ll~~~gV~v~pG~~F~~~g~iRis~~---~~~e~l~~al~rl~~~l~  374 (375)
T d1o4sa_         314 FYLFFKVRGD-----------DVKFCERLLEEKKVALVPGSAFLKPGFVRLSFA---TSIERLTEALDRIEDFLN  374 (375)
T ss_dssp             SEEEEECSSC-----------HHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC---SCHHHHHHHHHHHHHHHT
T ss_pred             EEEEEECCCC-----------HHHHHHHHHHhCCEEEEEccccCCCCeEEEEEc---CCHHHHHHHHHHHHHHhc
Confidence            4455555432           233444444 45876666666666678999986   578899999999988753

>d1lc5a_ c.67.1.1 (A:) L-threonine-O-3-phosphate decarboxylase CobD {Salmonella enterica [TaxId: 28901]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: L-threonine-O-3-phosphate decarboxylase CobD
species: Salmonella enterica [TaxId: 28901]

Probab=99.81  E-value=5.2e-18  Score=166.74  Aligned_cols=291  Identities=12%  Similarity=0.052  Sum_probs=188.8

Q ss_pred             ChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHH
Q 010842          124 SPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAK  203 (499)
Q Consensus       124 ~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~k  203 (499)
                      .+...++++    ++++.+|.+.+       ..++++|+++++...+....           .++..|.  .+.+..+..
T Consensus        56 ~~~~~~Lr~----aia~~~~v~~~-------~I~~~~g~~~~~~~~~~~~~-----------~~~~~v~--~p~~~~~~~  111 (355)
T d1lc5a_          56 DADYFHLHQ----ALARHHQVPAS-------WILAGNGETESIFTVASGLK-----------PRRAMIV--TPGFAEYGR  111 (355)
T ss_dssp             CTTCHHHHH----HHHHHHTSCGG-------GEEEESSHHHHHHHHHHHHC-----------CSEEEEE--ESCCTHHHH
T ss_pred             CCChHHHHH----HHHHHhCCCHH-------HEEecccHHHHHHHHHhhhc-----------ccccccc--CCccceecc
Confidence            344445544    47888899876       35777777776554433321           0233333  346666777


Q ss_pred             HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC---hhHHHHHHHHhCCEEE
Q 010842          204 VCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN---VEPLAEVANEYGIWVH  280 (499)
Q Consensus       204 a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~---l~~I~~ia~~~~~~lh  280 (499)
                      .....+.   .++.+|++.+++|.++ +++++.+..+      +.+|+++.++|+||.+-+   +.+|+++|++|+++++
T Consensus       112 ~~~~~~~---~~~~v~~~~~~~~~~~-~~~~~~~~~~------~~~v~l~nP~NPtG~~~~~e~l~~i~~~a~~~~~~li  181 (355)
T d1lc5a_         112 ALAQSGC---EIRRWSLREADGWQLT-DAILEALTPD------LDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLI  181 (355)
T ss_dssp             HHHHTTC---EEEEEECCGGGTTCCC-TTHHHHCCTT------CCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred             ccccccc---cceeeeeeccCCccce-eeeeeccccc------cceeeeecccCcccccchhhhhhhhhhhccccccccc
Confidence            7888888   8999998765556665 3444444333      337888899999999955   7788888999999999


Q ss_pred             eeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCCCCCcccCC
Q 010842          281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSESNSVVDFK  358 (499)
Q Consensus       281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~~~~~~~~~  358 (499)
                      +|.+|..+............ ...-..+..+..|+++.| .-+|+++..+.... ..+.. ...+               
T Consensus       182 ~De~y~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~l~GlR~G~~i~~~~~~~-~~~~~~~~~~---------------  244 (355)
T d1lc5a_         182 LDEAFIDFIPHETGFIPALK-DNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAM-ARMRRQQMPW---------------  244 (355)
T ss_dssp             EECTTGGGSTTCCCSGGGCT-TCTTEEEEEESTTTTTCTTTCCEEEECCCHHHH-HHHHHHSCTT---------------
T ss_pred             cccceeeeeeeccccccccc-ccccceeecccccccccccccccceeccchhhh-HHHHhhcCCc---------------
Confidence            99999765432222111111 112346778899998755 55898887665322 22211 1111               


Q ss_pred             CcccCCCCCCCcHHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHH
Q 010842          359 DWQVGTGRRFKSLRLWMVLRSY-GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEM  437 (499)
Q Consensus       359 ~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~  437 (499)
                              ....+...++...+ ..+.+.+..++..+..+++.+.|.+++++++. ++..+.+++.....          
T Consensus       245 --------~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-p~~~~f~~~~~~~~----------  305 (355)
T d1lc5a_         245 --------SVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLPLLTVY-PGRANYLLLRCERE----------  305 (355)
T ss_dssp             --------CSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEC-CCSSSEEEEEESCT----------
T ss_pred             --------cccccccccccccccccchhHHHHHHHHHHHHHHHHHHhhcCCcEEC-CCCCEEEEEECCCC----------
Confidence                    11244455555544 34567778888888899999999999998864 55556666666432          


Q ss_pred             HHHHHHHHHHhcCCEEEEeeeECC--EEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          438 LNRKLLDWVNSTGRVYLTHTIVGG--LYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       438 ~~~~l~~~l~~~g~~~~~~~~~~g--~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                       ..++.++|.++|+++..+..+.+  ..++|+++.    +++|+++++++|+++
T Consensus       306 -~~~~~~~L~~~gv~vr~~~~f~~~~~~~iRis~~----~~~e~~~li~aL~~i  354 (355)
T d1lc5a_         306 -DIDLQRRLLTQRILIRSCANYPGLDSRYYRVAIR----SAAQNERLLAALRNV  354 (355)
T ss_dssp             -TCCHHHHHHTTTEECEECTTSTTCCTTEEEEECC----CHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHCCcEEEeCccCCCCCCCEEEEEeC----CHHHHHHHHHHHHHh
Confidence             23467778888865555444543  468999984    689999999999886

>d1wsta1 c.67.1.1 (A:13-415) Multiple substrate aminotransferase, MSAT {Thermococcus profundus [TaxId: 49899]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Multiple substrate aminotransferase, MSAT
species: Thermococcus profundus [TaxId: 49899]

Probab=99.80  E-value=4.5e-18  Score=170.18  Aligned_cols=338  Identities=10%  Similarity=0.036  Sum_probs=215.0

Q ss_pred             HHHHHHHHHHHcccC---CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh
Q 010842          103 AGFLGEMLCACFNSV---GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD  179 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~  179 (499)
                      ...+.+.+...+...   ...|....+..++.+++.+|+.+.+|.+-+.     ...++|+|+++++..++.+..+    
T Consensus        46 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aia~~l~~~~g~~~~~-----~~I~it~G~~~al~~~~~~l~~----  116 (403)
T d1wsta1          46 VETIKKIAVEVLEEHADKALQYGTTKGFTPLRLALARWMEKRYDIPMSK-----VEIMTVAGSQQALDLIGRVFLN----  116 (403)
T ss_dssp             HHHHHHHHHHHHHHSHHHHHSCCCSSCCHHHHHHHHHHHHHHHCCCCTT-----CEEEEESSHHHHHHHHHHHHCC----
T ss_pred             HHHHHHHHHHHHHhCcccccCCCCCcCCHHHHHHHHHHHHHHhCCCCCh-----HHeeecccchHHHHHHHHHHhh----
Confidence            344555555544322   2347777788999999999999999875321     2579999999998887776532    


Q ss_pred             HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHc-CCccEEEEEecCCCc
Q 010842          180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEA-GLVPLFLCATVGTTS  258 (499)
Q Consensus       180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~-g~~p~~vv~t~gtt~  258 (499)
                             ++..|+++.++|..+...+..+|.   +++.||.+++   ..+...+........++ ...+.+++.+.++||
T Consensus       117 -------~gd~v~~~~P~y~~~~~~~~~~g~---~~~~v~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~NP  183 (403)
T d1wsta1         117 -------PGDPIVVEAPTYLAAIQAFKYYDP---EFISIPLDDK---GMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNP  183 (403)
T ss_dssp             -------TTCEEEEEESCCHHHHHHHHTTCC---EEEEEEEETT---EECHHHHHHHHHHHHHTTCCCCEEEECCSSCTT
T ss_pred             -------cCCccccCCCcchhhhHHHhhccc---cceeEeeccc---CCccccccccchhhhhccccccccccccccCCC
Confidence                   566788899999999999999999   9999998865   35566665555444433 334567778889999


Q ss_pred             cccc---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhc-CCCCCceeEecccccccCCCcceEEEEeCchhHH
Q 010842          259 TTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN-GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLV  334 (499)
Q Consensus       259 ~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~-g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~  334 (499)
                      ||.+   +.+++|+++|++|++++++|.+|+.+............ .-..-..++.+.+|+++....+|+++..+. ...
T Consensus       184 tG~~~s~~~l~~i~~~a~~~~~~li~De~y~~l~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~G~RiG~~i~~~~-~i~  262 (403)
T d1wsta1         184 AGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSKILAPGFRIGWVAAHPH-LIR  262 (403)
T ss_dssp             TCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGGCSSSCEEEEEESTTTTCGGGCCEEEEECHH-HHH
T ss_pred             CCccCCHHHHHHHHHHHHhcCceeccccchhheecCCCCCCcccccCCCCcEEEEccccceecCcccccccccchH-HHH
Confidence            9998   45678888999999999999999765443222211111 111234667889999875577898887543 221


Q ss_pred             HhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHH--HHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcC--CC
Q 010842          335 KALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLW--MVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSD--PR  408 (499)
Q Consensus       335 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~--~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~--~~  408 (499)
                      ...... .+...                 +.   ......  +.+...  ....+++..+...+..+.+.+.|.+.  .+
T Consensus       263 ~~~~~~-~~~~~-----------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~  321 (403)
T d1wsta1         263 KMEIAK-QSIDL-----------------CT---NTFGQAIAWKYVENGYLDEHIPKIIEFYKPRRDAMLEALEEYMPEG  321 (403)
T ss_dssp             HHHHHH-HHHHS-----------------SC---CHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTT
T ss_pred             HHHHHH-hhhcc-----------------cc---ccchhhhHHhhhhccccchhHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence            111110 00000                 00   111111  111111  12345566666667777777777653  35


Q ss_pred             eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE----CCEEEEEEeccCCCCcHHHHHHHHH
Q 010842          409 FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV----GGLYMLRFAVGASLTDERHVVAAWE  484 (499)
Q Consensus       409 ~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lRi~~~~~~~t~~di~~l~~  484 (499)
                      +....+.....+++++....  +       .+.+.+.|.++|+.++.+..+    .+..++|++++  ..++++|++.++
T Consensus       322 ~~~~~p~gg~~~~~~~~~~~--~-------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRi~~~--~~~~~~l~~al~  390 (403)
T d1wsta1         322 VEWTKPEGGMFVRVTLPEGI--D-------TKLMMERAVAKGVAYVPGEAFFVHRDKKNTMRLNFT--YVPEETIREGVR  390 (403)
T ss_dssp             CEECCCSBSSEEEEECCTTC--C-------TTTTHHHHHHTTEECEEGGGGSTTCCCCSEEEEECS--SSCHHHHHHHHH
T ss_pred             eEEeCCCceeEEEEECCCCC--C-------HHHHHHHHHHCCEEEEechhhcCCCCCCCEEEEEec--CCCHHHHHHHHH
Confidence            55543333344445554321  0       234666777888655554433    23578999985  257899999999


Q ss_pred             HHHHHHHHHhc
Q 010842          485 LIMEGADRLFK  495 (499)
Q Consensus       485 ~l~~~~~~l~~  495 (499)
                      +|++++++..+
T Consensus       391 rl~~~l~~~~k  401 (403)
T d1wsta1         391 RLAETIKEEMK  401 (403)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999887654

>d2gb3a1 c.67.1.1 (A:4-392) AAT homologue TM1698 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: AAT homologue TM1698
species: Thermotoga maritima [TaxId: 2336]

Probab=99.80  E-value=1.4e-18  Score=173.17  Aligned_cols=329  Identities=14%  Similarity=0.087  Sum_probs=214.8

Q ss_pred             HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      |..+.+.+.+.. .....|....+..++.+++.+|+.+..|.+-+.     ...++|+|+++++..++.+..+       
T Consensus        43 p~~~~~al~~~~-~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~-----~~I~it~G~~~~l~~~~~~l~~-------  109 (389)
T d2gb3a1          43 PEVFFERIYENK-PEVVYYSHSAGIWELREAFASYYKRRQRVDVKP-----ENVLVTNGGSEAILFSFAVIAN-------  109 (389)
T ss_dssp             CTHHHHHHHHTC-CSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCG-----GGEEEESHHHHHHHHHHHHHCC-------
T ss_pred             CHHHHHHHHhcC-CCCCCCCCCcCCHHHHHHHHHHHHHhcCCCccc-----ceEEeccccccccccccccccc-------
Confidence            445556666543 345568777788999999999999998875321     2568899999988777766533       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|+++.+.++.+...+...|.   .++.++.+.++ +..+.+.+...+.+      .+.+++.+.++||||.+
T Consensus       110 ----~gd~V~i~~P~y~~~~~~~~~~g~---~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~~l~nP~NPtG~~  175 (389)
T d2gb3a1         110 ----PGDEILVLEPFYANYNAFAKIAGV---KLIPVTRRMEE-GFAIPQNLESFINE------RTKGIVLSNPCNPTGVV  175 (389)
T ss_dssp             ----TTCEEEEEESCCTHHHHHHHHHTC---EEEEEECCGGG-TSCCCTTGGGGCCT------TEEEEEEESSCTTTCCC
T ss_pred             ----CCCeEEEeCCCCccccccccccCc---ccccccccccc-ccchhhhhhhhccc------CccEEEeCCCCcccccc
Confidence                566788888999999999999999   89999987654 44454555544433      24478888999999998


Q ss_pred             ---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhc
Q 010842          263 ---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALS  338 (499)
Q Consensus       263 ---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~  338 (499)
                         +.+++|+++|++|+++++.|.+|+...... ...........-..+..+..|.+..| .-+|+++..++........
T Consensus       176 ~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~-~~~~~~~~~~~~~~v~~s~sK~~~~~GlRiG~~~~~~~~i~~~~~~  254 (389)
T d2gb3a1         176 YGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRG-EFASALSIESDKVVVIDSVSKKFSACGARVGCLITRNEELISHAMK  254 (389)
T ss_dssp             CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCCTTEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHHH
T ss_pred             chHHHHHHHHhhcccCCEEEEEecccccccccc-ccccccccccccccccccccccccCcccceeeeeccchhHHHHHhh
Confidence               558899999999999999999997654332 11122222222345556777777766 6689888776543221111


Q ss_pred             CCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC
Q 010842          339 TDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH  416 (499)
Q Consensus       339 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~  416 (499)
                      ....++..                      ..+...++...+  ..+.+++..++..++++++.+.|++++......+..
T Consensus       255 ~~~~~~~~----------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~p~~  312 (389)
T d2gb3a1         255 LAQGRLAP----------------------PLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEHGLKRFTKPSG  312 (389)
T ss_dssp             HHHHSCCC----------------------CHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSB
T ss_pred             hhhccccc----------------------cccccccccccccccchhcccccccccccchhhhhhhhhhccccccCCCc
Confidence            11111100                      122223333332  456677888888899999999999985444333334


Q ss_pred             ceEEEEEecCCCCCCcchhHHHHHHHHHHHHhc------CCEEEEeeeE-----CCEEEEEEeccCCCCcHHHHHHHHHH
Q 010842          417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVNST------GRVYLTHTIV-----GGLYMLRFAVGASLTDERHVVAAWEL  485 (499)
Q Consensus       417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~~~~~~~~~-----~g~~~lRi~~~~~~~t~~di~~l~~~  485 (499)
                      ...++++++...          ..++.++|.++      |..++.+..+     .++.++|++++   .+++++++.++.
T Consensus       313 g~~~~~~lp~~~----------~~~~~~~ll~e~~l~~~~v~v~pg~~f~~~~~~~~~~iRis~~---~~~~~l~~a~~~  379 (389)
T d2gb3a1         313 AFYITAELPVED----------AEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACV---LEKDLLSRAIDV  379 (389)
T ss_dssp             SSEEEEECSSSC----------HHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECC---SCHHHHHHHHHH
T ss_pred             eEEEEEeCCCCC----------HHHHHHHHHHhhhhhhCCEEEEeCcccccCCCCCCCEEEEEEc---CCHHHHHHHHHH
Confidence            445555654322          23344444332      3333333322     13578999985   578899999999


Q ss_pred             HHHHHHHHh
Q 010842          486 IMEGADRLF  494 (499)
Q Consensus       486 l~~~~~~l~  494 (499)
                      |.+..+++.
T Consensus       380 L~~~lk~f~  388 (389)
T d2gb3a1         380 LMEGLKMFC  388 (389)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhh
Confidence            998887754

>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis protein C {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Spore coat polysaccharide biosynthesis protein C
species: Helicobacter pylori [TaxId: 210]

Probab=99.79  E-value=2.3e-18  Score=170.33  Aligned_cols=330  Identities=11%  Similarity=0.068  Sum_probs=218.7

Q ss_pred             HHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhcc
Q 010842          107 GEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENM  186 (499)
Q Consensus       107 ~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~  186 (499)
                      .+.+...+..  ..+..+|....+|++    +++++|.+..         +++++||.|+..++.+....        ..
T Consensus        15 ~~~v~~~l~~--~~~~~G~~v~~fE~~----~~~~~g~k~a---------i~~~Sgt~Al~~al~al~~~--------~~   71 (371)
T d2fnua1          15 KKAVLEVLNS--KQLTQGKRSLLFEEA----LCEFLGVKHA---------LVFNSATSALLTLYRNFSEF--------SA   71 (371)
T ss_dssp             HHHHHHHHTS--SCCSSSHHHHHHHHH----HHHHHTCSEE---------EEESCHHHHHHHHHHHSSCC--------CT
T ss_pred             HHHHHHHHcC--CCccCCHHHHHHHHH----HHHHHCcCeE---------EEEecHHHHHHHHHHHhccc--------CC
Confidence            3445555653  345678999999988    9999998865         99999999999988876321        11


Q ss_pred             CCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChh
Q 010842          187 HKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVE  266 (499)
Q Consensus       187 ~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~  266 (499)
                      ++.+|++|..++.+...++...|+   .++.++++++.  .++.+++++.+.++++      +|++++   ..|...+++
T Consensus        72 ~~~eVi~p~~t~~a~~~ai~~~G~---~pv~vDi~~~~--~~~~~~~~~~~~~~t~------avi~vh---~~G~~~~~~  137 (371)
T d2fnua1          72 DRNEIITTPISFVATANMLLESGY---TPVFAGIKNDG--NIDELALEKLINERTK------AIVSVD---YAGKSVEVE  137 (371)
T ss_dssp             TSCEEEECSSSCTHHHHHHHHTTC---EEEECCBCTTS--SBCGGGSGGGCCTTEE------EEEEEC---GGGCCCCHH
T ss_pred             CCCeeecccccccccceeeeccCc---ccccccccccc--cccchhhhhhccchhh------cccccc---ccccccccc
Confidence            345799999999999999999999   99999998764  6777888777665443      565554   689999999


Q ss_pred             HHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCC
Q 010842          267 PLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKN  346 (499)
Q Consensus       267 ~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~  346 (499)
                      +|.++|+++|++++.|+|++.+.......   ......+.++++.+.|.+.+ .+.|++++.+++...+...........
T Consensus       138 ~i~~~~~~~~i~lIEDaaqa~Ga~~~~~~---~G~~g~~~~~Sf~~~K~l~~-g~GG~i~t~~~~~~~~~~~~~~~g~~~  213 (371)
T d2fnua1         138 SVQKLCKKHSLSFLSDSSHALGSEYQNKK---VGGFALASVFSFHAIKPITT-AEGGAVVTNDSELHEKMKLFRSHGMLK  213 (371)
T ss_dssp             HHHHHHHHHTCEEEEECTTCTTCEETTEE---TTSSSSEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHHHHTBTTEEE
T ss_pred             cccccccccchhhccchhhccCceecccc---CCcccccccccccccccccc-ccceEEEeechhhhhhccccccccccc
Confidence            99999999999999999998765432221   11233467888889999876 467888888876554332211111000


Q ss_pred             CCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC-----CCceEEE
Q 010842          347 KPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP-----RHFALVC  421 (499)
Q Consensus       347 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~-----~~~~~v~  421 (499)
                      ...   ...+  ...+...-|+.-+.+...+..+  +.+.+.+++..++++++.+.|.+.+++.++.+     .....+.
T Consensus       214 ~~~---~~~~--~~~~G~n~r~sel~Aaigl~qL--~~l~~~~~~R~~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~  286 (371)
T d2fnua1         214 KDF---FEGE--VKSIGHNFRLNEIQSALGLSQL--KKAPFLMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYP  286 (371)
T ss_dssp             SSS---SCEE--ESSCCCBCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEE
T ss_pred             ccc---cccc--cccccccccccchhhhhhhhhh--hhccchhhhhhhhhhhhccccccccccccccccccccccccccc
Confidence            000   0000  0112233344445544444444  77889999999999999999999988877642     1222233


Q ss_pred             EEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEE-eeeE-----------CC---------EEEEEEeccCCCCcHHHHH
Q 010842          422 FRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLT-HTIV-----------GG---------LYMLRFAVGASLTDERHVV  480 (499)
Q Consensus       422 f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~-----------~g---------~~~lRi~~~~~~~t~~di~  480 (499)
                      +.+....       ....+.+.+.|.++|+-.-. ..++           .+         ...+.+= +++..|++|++
T Consensus       287 i~~~~~~-------~~~r~~~~~~L~~~gI~~~~~y~pl~~~~~~~~~~~~~~~pnae~~~~~~l~LP-~~~~lt~~di~  358 (371)
T d2fnua1         287 ILMHQKF-------FTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLP-CHANLNLESVQ  358 (371)
T ss_dssp             EEECGGG-------GGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEEC-CCTTCCHHHHH
T ss_pred             ccccccc-------hhHHHHHHHHHHHCCCCcceeCcccccCHHHHhccccCCCHHHHHHHhCeEECc-CCCCCCHHHHH
Confidence            3333210       11134677788778842110 0000           11         1345553 47889999999


Q ss_pred             HHHHHHHHHHHH
Q 010842          481 AAWELIMEGADR  492 (499)
Q Consensus       481 ~l~~~l~~~~~~  492 (499)
                      ++++.|++..+.
T Consensus       359 ~I~~~i~~~~~~  370 (371)
T d2fnua1         359 NIAHSVLKTFES  370 (371)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc
Confidence            999999988764

>d1c7ga_ c.67.1.2 (A:) Tyrosine phenol-lyase {Erwinia herbicola [TaxId: 549]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tyrosine phenol-lyase
species: Erwinia herbicola [TaxId: 549]

Probab=99.78  E-value=6.4e-18  Score=170.90  Aligned_cols=323  Identities=14%  Similarity=0.075  Sum_probs=189.0

Q ss_pred             CCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC
Q 010842          117 VGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ  196 (499)
Q Consensus       117 ~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~  196 (499)
                      ....|..+|...+||+.    +++++|.+..         +++++||+||..++.+..+           ++.+|++...
T Consensus        67 GDd~Y~~dpt~~~lE~~----~a~l~G~e~a---------l~~~SGt~An~~a~~~l~~-----------~Gd~Vi~~~~  122 (456)
T d1c7ga_          67 GDEAYAGSENFYHLEKT----VKELFGFKHI---------VPTHQGRGAENLLSQLAIK-----------PGQYVAGNMY  122 (456)
T ss_dssp             CCCCSSSCHHHHHHHHH----HHHHHCCSEE---------EEESSHHHHHHHHHHHHCC-----------TTEEEEESSC
T ss_pred             cchhccCCchHHHHHHH----HHHHhCCCeE---------EECCCHHHHHHHHHHHhcC-----------CCCeEecCcc
Confidence            34678899999999998    8999999864         9999999999998887632           5667776533


Q ss_pred             CchhHHHHHHHhCCCCCCeEEeeCCC--------CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc----ccCC
Q 010842          197 THSTFAKVCKLAGVSPANIRALPTSV--------DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT----AVDN  264 (499)
Q Consensus       197 ~H~s~~ka~~~~G~g~~~v~~v~~~~--------~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G----~id~  264 (499)
                      . ++........|.   ..+.+.++.        ...+.+|+++|++.|++.++.  .+.+++....+|..|    ..++
T Consensus       123 f-~~~~~~i~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~I~~~~~~--~~~~i~~e~~~n~~gG~~~~~~~  196 (456)
T d1c7ga_         123 F-TTTRFHQEKNGA---TFVDIVRDEAHDASLNLPFKGDIDLNKLATLIKEKGAE--NIAYICLAVTVNLAGGQPVSMAN  196 (456)
T ss_dssp             C-HHHHHHHHHTTE---EEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGG--GEEEEEEESSBTTTTSBCCCHHH
T ss_pred             h-HHHHHHHHHcCc---eeeeccccccccccccCCccccCCHHHHHHHhhhcCCc--cceeEEeeecccccccceecHHH
Confidence            2 333334455666   555443321        113589999999999986542  233566666666655    3367


Q ss_pred             hhHHHHHHHHhCCEEEeeccccchhcc-C----ccchh-----hhc-CCCCCceeEecccccccCCCcceEEEEeCchhH
Q 010842          265 VEPLAEVANEYGIWVHVDAAYAGSACI-C----PEFRH-----YLN-GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLL  333 (499)
Q Consensus       265 l~~I~~ia~~~~~~lhvD~A~g~~~~~-~----~~~~~-----~~~-g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l  333 (499)
                      +++|.++|++||+.+|+|+|+...... .    ..+..     ... -...+|+++++.||.+++|.| |+++++++...
T Consensus       197 l~~i~~~a~~~~~~~~~D~a~~~~~a~~~~~~~~~~~~~~i~~i~~~~~~~ad~~s~s~~K~~~~~~G-G~i~~~~~~l~  275 (456)
T d1c7ga_         197 MRAVHEMASTYGIKIFYDATRCVENAYFIKEQEAGYENVSIKDIVHEMFSYADGCTMSGKKDCLVNIG-GFLCMNDEEMF  275 (456)
T ss_dssp             HHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEETTTTTCCSSC-EEEEESCHHHH
T ss_pred             HHHHHHHHHHcCCEEEEEcchhhcchhhhcccccccCCCChhhhccccccccccEEEeccccccccce-eEEEcCCHHHH
Confidence            899999999999999999997543211 0    11111     000 013589999999999998754 78888876544


Q ss_pred             HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-CcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          334 VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-KSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       334 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                      .+.......+-...              ..++... ....+...+...  .+ .+.+++..+++++|.+.|++. ++.++
T Consensus       276 ~~~r~~~~~~~g~~--------------~~g~~~~~~~~a~a~~l~e~--~~-~~~l~~r~~~~~~L~e~L~~~-g~~vv  337 (456)
T d1c7ga_         276 SAAKELVVVYEGMP--------------SYGGLAGRDMEAMAIGLREA--MQ-YEYIEHRVKQVRYLGDKLREA-GVPIV  337 (456)
T ss_dssp             HHHHHHHHHHTCCT--------------TTTTCCHHHHHHHHHHHHHH--TC-HHHHHHHHHHHHHHHHHHHHT-TCCBC
T ss_pred             HHHHHhccccCCCc--------------ccchhhHHHHHHHHHHHHHh--cC-HHHHHHHHHHHHHHHHHHHhc-cCCcc
Confidence            32211110000000              0001110 112222223221  11 234566677888999999887 66666


Q ss_pred             cCCCceEEEEEe---cCCCCCCcchhHHHHHHHHH-HHHhcCCEEEEeee----E---C------CEEEEEEeccCCCCc
Q 010842          413 VPRHFALVCFRL---NPYPHSGSADTEMLNRKLLD-WVNSTGRVYLTHTI----V---G------GLYMLRFAVGASLTD  475 (499)
Q Consensus       413 ~~~~~~~v~f~~---~~~~~~~~~~~~~~~~~l~~-~l~~~g~~~~~~~~----~---~------g~~~lRi~~~~~~~t  475 (499)
                      .++..+.+....   .+.-  ...+ . ..+.+.. .+.+.|+-.+....    .   .      ....+|+++.....|
T Consensus       338 ~p~g~~~v~vda~~~~~~i--~~~~-~-~~~~~~~~l~~~~GIr~~~~g~~~~~~~~~~g~~~~~~~e~vRLaip~~~~T  413 (456)
T d1c7ga_         338 EPTGGHAVFLDARRFCPHL--TQDQ-F-PAQSLAASIYMETGVRSMERGIVSAGRSKETGENHRPKLETVRLTIPRRVYT  413 (456)
T ss_dssp             SSCCSSEEEEEHHHHCTTS--CGGG-C-HHHHHHHHHHHHHSEECEEESHHHHCBCSSSCCBCCCSCCEEEEECCTTSCC
T ss_pred             cCCCCcceeEechhhccCC--Cccc-c-cHHHHHHHHHHHhCeeecccCccccccCCcccCccCCccceEEEecCcccCC
Confidence            555444333221   1110  0000 0 1223333 33455642222110    0   1      123589998534459


Q ss_pred             HHHHHHHHHHHHHHHHH
Q 010842          476 ERHVVAAWELIMEGADR  492 (499)
Q Consensus       476 ~~di~~l~~~l~~~~~~  492 (499)
                      ++|||.++++|+++.++
T Consensus       414 ~e~iD~Vae~i~~v~~~  430 (456)
T d1c7ga_         414 YAHMDVVADGIIKLYQH  430 (456)
T ss_dssp             HHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHhh
Confidence            99999999999998753

>d2v1pa1 c.67.1.2 (A:5-471) Tryptophan indol-lyase (tryptophanase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=1.3e-17  Score=170.05  Aligned_cols=338  Identities=11%  Similarity=0.034  Sum_probs=193.9

Q ss_pred             cCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCC
Q 010842          116 SVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSD  195 (499)
Q Consensus       116 ~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~  195 (499)
                      .....|...|...+||+.    +++++|.+..         +++++||+||..++.+++......... . ....+..+.
T Consensus        65 ~gd~~Y~~~~~~~~le~~----~a~l~G~~~~---------~~~~sGt~A~~~a~~~~~~~g~~~~~~-~-~~~~i~~~~  129 (467)
T d2v1pa1          65 RGDEAFSGSRSYYALAES----VKNIFGYQYT---------IPTHQGRGAEQIYIPVLIKKREQEKGL-D-RSKMVAFSN  129 (467)
T ss_dssp             SCCCCSSSCHHHHHHHHH----HHHHTCCSEE---------EEECSSTTTHHHHHHHHHHHHHHHHCC-C-TTTCEEEES
T ss_pred             ccchhhcCCchHHHHHHH----HHHHHCCCEE---------EECCCCHHHHHHHHHHHhhccceEecC-C-CCcEEEEec
Confidence            334567888999999987    8999998764         899999999999999887653221100 0 122344565


Q ss_pred             CCchhHHHHHHHhCCCCCCeEEeeCCCC--------CCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcc-ccc---C
Q 010842          196 QTHSTFAKVCKLAGVSPANIRALPTSVD--------ANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTST-TAV---D  263 (499)
Q Consensus       196 ~~H~s~~ka~~~~G~g~~~v~~v~~~~~--------~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~-G~i---d  263 (499)
                      ..|.....++...|.   .++.++.+..        ..+.+|+++|++.+.+..... .+ +++....++.. |.+   +
T Consensus       130 ~~~~~~~~~~~~~G~---~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~-~~-~i~~e~~~~~~gg~~~~~~  204 (467)
T d2v1pa1         130 YFFDTTQGHSQINGC---TVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNN-VP-YIVATITSNSAGGQPVSLA  204 (467)
T ss_dssp             SCCHHHHHHHHHTTC---EEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGG-CC-CEEEESSBCGGGCBCCCHH
T ss_pred             ccccccHHHHHHcCC---eeeecccccccccccccccccCCCHHHHHHHHhhcCccc-cc-eeeecceeeccccccCCHH
Confidence            667778888888998   8888876532        125799999999998764322 23 23333333333 333   6


Q ss_pred             ChhHHHHHHHHhCCEEEeeccccchhccC-----ccchh-----hhc-CCCCCceeEecccccccCCCcceEEEEeCchh
Q 010842          264 NVEPLAEVANEYGIWVHVDAAYAGSACIC-----PEFRH-----YLN-GIERVDSFSFSPHKWLLSYLDCCCLWVKQPGL  332 (499)
Q Consensus       264 ~l~~I~~ia~~~~~~lhvD~A~g~~~~~~-----~~~~~-----~~~-g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~  332 (499)
                      ++++|+++|++||++||+|+|+.......     ..+.+     ... -...+|+++++.||.+++|. .|++..++...
T Consensus       205 ~l~~i~~ia~~~g~~l~~D~a~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~K~~~~~~-gg~i~~~~~~~  283 (467)
T d2v1pa1         205 NLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPM-GGLLCMKDDSF  283 (467)
T ss_dssp             HHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSS-CEEEEECSGGG
T ss_pred             HHHHHHHHHHHcCCEEEEechhhhccccccccccccccCCcccccchhhcccCCEEEecCCCCCCCCC-ceeEEecchhh
Confidence            78999999999999999999975432211     11110     000 12359999999999999874 46666666543


Q ss_pred             HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          333 LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       333 l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                      ................             ....-......+.+....+......+.+++..+++++|.+.|++. ++.+.
T Consensus       284 ~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~  349 (467)
T d2v1pa1         284 FDVYTECRTLCVVQEG-------------FPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI-GVVCQ  349 (467)
T ss_dssp             HHHHHHHHHHHHHTTS-------------SCCCCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TCCEE
T ss_pred             hhHHHhhccccccccc-------------CcchhhhHHHHHHHHHHHhHHhhhHHHHHHHHHHHHHHHHHHHhc-CCccc
Confidence            2111100000000000             000001112222332222222333567777888999999999886 44443


Q ss_pred             cCCCceEEEEEe---cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEee-------------eECCEEEEEEeccCCCCcH
Q 010842          413 VPRHFALVCFRL---NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHT-------------IVGGLYMLRFAVGASLTDE  476 (499)
Q Consensus       413 ~~~~~~~v~f~~---~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-------------~~~g~~~lRi~~~~~~~t~  476 (499)
                       ++....+....   .+..  ...+.. ......+.+.+.|+..+...             .......+|+++.....|+
T Consensus       350 -~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~ll~~~Gi~~~~~g~~~~~~~~~~~~~~~~~~~~vRlaip~~~~T~  425 (467)
T d2v1pa1         350 -QAGGHAAFVDAGKLLPHI--PADQFP-AQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQ  425 (467)
T ss_dssp             -EECSSCEEEEHHHHSTTS--CGGGCH-HHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTCCH
T ss_pred             -CCCccceeecchhhcCCc--chhhhh-hHHHHHHHHHHcCCeeecccccccccccccCCccCCCcceEEEecCCCCCCH
Confidence             22222222211   1111  011101 11122233345564322111             0112357999875455699


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010842          477 RHVVAAWELIMEGADR  492 (499)
Q Consensus       477 ~di~~l~~~l~~~~~~  492 (499)
                      +|||+++++|+++.++
T Consensus       426 eeiD~vv~~l~~v~~~  441 (467)
T d2v1pa1         426 THMDFIIEAFKHVKEN  441 (467)
T ss_dssp             HHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999999864

>d1u08a_ c.67.1.1 (A:) Putative methionine aminotransferase YdbL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Putative methionine aminotransferase YdbL
species: Escherichia coli [TaxId: 562]

Probab=99.77  E-value=4.5e-18  Score=168.91  Aligned_cols=327  Identities=11%  Similarity=0.080  Sum_probs=214.7

Q ss_pred             HHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhh
Q 010842          103 AGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVG  182 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~  182 (499)
                      |..+.+.+...++.....|....+..++.+.+.+|+.+.+|.+...    ....++|+|+++|+..++.+..+       
T Consensus        41 p~~i~~a~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~----~~~I~vt~G~~~al~~~~~~l~~-------  109 (382)
T d1u08a_          41 PRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDA----DSDITVTAGATEALYAAITALVR-------  109 (382)
T ss_dssp             CHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCT----TTTEEEESSHHHHHHHHHHHHCC-------
T ss_pred             CHHHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHHHHHhCCCCCC----CceEEeccchHHHHHHHHhhccc-------
Confidence            4556676776676666678888889999999999999999975321    01468999999999888876643       


Q ss_pred             hhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc
Q 010842          183 AENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV  262 (499)
Q Consensus       183 ~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i  262 (499)
                          ++..|+++...++.+...+...|.   .+..++.+.+ .+.+|.+++++.+.++      +.+++.+.++|+||.+
T Consensus       110 ----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~------~~~i~l~~P~NPtG~v  175 (382)
T d1u08a_         110 ----NGDEVICFDPSYDSYAPAIALSGG---IVKRMALQPP-HFRVDWQEFAALLSER------TRLVILNTPHNPSATV  175 (382)
T ss_dssp             ----TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECCTT-TCCCCHHHHHHHCCTT------EEEEEEESSCTTTCCC
T ss_pred             ----ccceEEEecccccchhhhhhhccc---cceecccccc-cccCCHHHHhhhhccC------ccEEEECCCCcccccc
Confidence                567788888999999999999998   8888888765 4889999998876654      3478889999999999


Q ss_pred             CC---hhHHHHHHHHhCCEEEeeccccchhccCccchhhhc--CCCCCceeEecccccccCC-CcceEEEEeCchhHHHh
Q 010842          263 DN---VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLN--GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKA  336 (499)
Q Consensus       263 d~---l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~--g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~  336 (499)
                      -+   +++|+++|++++++++.|..|...............  ....--.+..+..|.++.| .-+|+++..+. .. +.
T Consensus       176 ~~~~~~~~l~~~~~~~~~~ii~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~pG~RiG~~v~~~~-~~-~~  253 (382)
T d1u08a_         176 WQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPAP-IS-AE  253 (382)
T ss_dssp             CCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCHH-HH-HH
T ss_pred             cccccchhhhhhhccccceeeeecchhhccccccccccccccccccCcEEEEeeccccccCCcccchhhhccch-hH-HH
Confidence            55   567777888999999999988654332111111100  0001125566677877655 77899876543 22 22


Q ss_pred             hcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHH--hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC
Q 010842          337 LSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRS--YGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP  414 (499)
Q Consensus       337 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~--~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~  414 (499)
                      +.....+....                    .......++...  .+.+.+++..++..+.++.+.+.+.. .++++. +
T Consensus       254 ~~~~~~~~~~~--------------------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~-~  311 (382)
T d1u08a_         254 IRKVHQYLTFS--------------------VNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNE-SRLEIL-P  311 (382)
T ss_dssp             HHHHHHHHTSS--------------------CCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTS-SSCEEC-C
T ss_pred             HHhhhcccccc--------------------cccccccccccccccchHHHHHHHHHHHhhhhhhhhhhcc-CCcEEe-c
Confidence            21111111000                    012222222222  24566777778888888888888765 478876 4


Q ss_pred             CCceE-EEEEecCCCCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeE----CCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          415 RHFAL-VCFRLNPYPHSGSADTEMLNRKLLDWVN-STGRVYLTHTIV----GGLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       415 ~~~~~-v~f~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~----~g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      |+.+. +++++....   ..    ...++.++|. +.|++++.+..+    .++.++|+|++   ++++++++.+++|++
T Consensus       312 p~gg~~~~~~~~~~~---~~----d~~e~~~~ll~e~gV~v~PG~~F~~~~~~~~~~Ris~~---~~~e~l~~al~RL~~  381 (382)
T d1u08a_         312 CEGTYFLLVDYSAVS---TL----DDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFA---KKESTLLAAAERLRQ  381 (382)
T ss_dssp             CCBSSEEEEECTTTC---CS----CHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECC---SCHHHHHHHHHHHTT
T ss_pred             CCceEEEEEecCCCC---CC----CHHHHHHHHHHHCCEEEEcchhhCCCCCCCCEEEEEEe---CCHHHHHHHHHHHhC
Confidence            55444 444554321   01    1344556654 457655554444    24578999986   477889998888765

>d1ax4a_ c.67.1.2 (A:) Tryptophan indol-lyase (tryptophanase) {Proteus vulgaris [TaxId: 585]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Beta-eliminating lyases
domain: Tryptophan indol-lyase (tryptophanase)
species: Proteus vulgaris [TaxId: 585]

Probab=99.77  E-value=7.6e-17  Score=164.22  Aligned_cols=335  Identities=11%  Similarity=0.033  Sum_probs=190.6

Q ss_pred             CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCC
Q 010842          118 GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQT  197 (499)
Q Consensus       118 ~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~  197 (499)
                      ...|..+|...+||+.    +++++|.+..         ++++|||+||..++.++++.....    +..+..++.+...
T Consensus        68 d~~y~~~~~~~~le~~----~a~l~g~~~~---------~~~~sGt~A~~~a~~~~~~~g~~~----~~~~~~~i~~~~h  130 (465)
T d1ax4a_          68 DEAYAGSRNYYDLKDK----AKELFNYDYI---------IPAHQGRGAENILFPVLLKYKQKE----GKAKNPVFISNFH  130 (465)
T ss_dssp             CCCSSSCHHHHHHHHH----HHHHHCCCEE---------EEESSHHHHHHHHHHHHHHHHHHT----TCCSSCEEEESSC
T ss_pred             hhhhccChHHHHHHHH----HHHHHCCCEE---------EECCCcHHHHHHHHHHHHHHHHhc----CCCCCeEEeccch
Confidence            3467778888888887    7888998653         999999999999999998653221    2233344445444


Q ss_pred             chhHHHHHHHhCCCCCCeEEeeCC--------CCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccc-cc---CCh
Q 010842          198 HSTFAKVCKLAGVSPANIRALPTS--------VDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTT-AV---DNV  265 (499)
Q Consensus       198 H~s~~ka~~~~G~g~~~v~~v~~~--------~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G-~i---d~l  265 (499)
                      |.+....+...|.   ..+.++..        ....+.+|+++|+++|++....  .+.+++....++..| .+   +++
T Consensus       131 ~~t~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~l  205 (465)
T d1ax4a_         131 FDTTAAHVELNGC---KAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGAD--NIVAIVSTVTCNSAGGQPVSMSNL  205 (465)
T ss_dssp             CHHHHHHHHHTTC---EEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGG--GEEEEEEESSBTTTTSBCCCHHHH
T ss_pred             hhhhHHHHHHcCC---eeecccccccCCCCCCCCccCccCHHHHHHHHHhhccc--cccceeeccccccCceecCCHHHH
Confidence            5566666677777   55544321        1124689999999999875432  233344444333333 22   568


Q ss_pred             hHHHHHHHHhCCEEEeeccccchhccC-----cc-----chhhh-cCCCCCceeEecccccccCCCcceEEEEeCchhHH
Q 010842          266 EPLAEVANEYGIWVHVDAAYAGSACIC-----PE-----FRHYL-NGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLV  334 (499)
Q Consensus       266 ~~I~~ia~~~~~~lhvD~A~g~~~~~~-----~~-----~~~~~-~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~  334 (499)
                      ++|.++|++||+++|+|+|+..+....     +.     ..... .....+|+++++.||.++.|. .|++.+++.....
T Consensus       206 ~~i~~~~~~~g~~l~~D~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~d~~s~s~~k~~~~~~-~g~l~~~~~~~~~  284 (465)
T d1ax4a_         206 KEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNI-GGLVAIRDNEEIF  284 (465)
T ss_dssp             HHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSS-CEEEEESSCHHHH
T ss_pred             HHHHHHHHHcCCEEEEECcchhhhhcccccccccccccchhhhccccccccceeEeecccCccccc-ceeEeecchHHHH
Confidence            899999999999999999985432210     00     00000 012248999999999998775 5788887654322


Q ss_pred             Hhhc-CCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          335 KALS-TDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLN-LQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       335 ~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                      .... ....+....                 +....+.....++.....+. .+..+++..+++++|.+.|++. ++.++
T Consensus       285 ~~~~~~~~~~~~~~-----------------~~~~~~~~~~~a~~~~~~e~~~~~~~~~~~~~~~~l~~~L~~~-g~~~v  346 (465)
T d1ax4a_         285 TLARQRCVPMEGFV-----------------TYGGLAGRDMAAMVQGLEEGTEEEYLHYRIGQVKYLGDRLREA-GIPIQ  346 (465)
T ss_dssp             HHHHHHHHHHTCST-----------------TTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TCCBC
T ss_pred             HhhhccccccccCC-----------------CcchhhHHHHHHHhhhhHHhhhHHHHHHHHHHHHHHHHHHHhh-cCccc
Confidence            1111 000110000                 00111222222222221121 2445667778889999999986 66666


Q ss_pred             cCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee-------------ECCEEEEEEeccCCCCcHHHH
Q 010842          413 VPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI-------------VGGLYMLRFAVGASLTDERHV  479 (499)
Q Consensus       413 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-------------~~g~~~lRi~~~~~~~t~~di  479 (499)
                      .++....+.+.....-.............+.+.+.+.|+.......             ......+|+++.....|++||
T Consensus       347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~GI~~~~~~~~~~~~~~~~g~~~~~~~~~vRlalP~~~~T~eei  426 (465)
T d1ax4a_         347 YPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHM  426 (465)
T ss_dssp             SSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHH
T ss_pred             cCCCcceeeeehhhhcCCCccccchhHHHHHHHHHhcCceeccccccccccccccCCccCCCCCceEEeCCCCCCCHHHH
Confidence            5555444433322110000111111122233334455643222110             011246999863234599999


Q ss_pred             HHHHHHHHHHHHHH
Q 010842          480 VAAWELIMEGADRL  493 (499)
Q Consensus       480 ~~l~~~l~~~~~~l  493 (499)
                      |+++++|+++.++.
T Consensus       427 D~vv~~l~~v~~~~  440 (465)
T d1ax4a_         427 DYIADALIGLKEKF  440 (465)
T ss_dssp             HHHHHHHHTTHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999988764

>d2r5ea1 c.67.1.1 (A:12-429) Kynurenine--oxoglutarate transaminase I {Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Yellowfever mosquito (Aedes aegypti) [TaxId: 7159]

Probab=99.76  E-value=2.2e-17  Score=165.97  Aligned_cols=338  Identities=12%  Similarity=0.064  Sum_probs=215.3

Q ss_pred             HHHHHHHHHHHcccC---CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHh
Q 010842          103 AGFLGEMLCACFNSV---GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALD  179 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~---~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~  179 (499)
                      |..+.+.+..++...   ...|....+..++.+++.+|+.+.+|.+...    ....++|+|+++|+..++.+..+    
T Consensus        41 p~~i~eal~~a~~~~~~~~~~Y~~~~G~~~lReaiA~~~~~~~g~~~~p----~~~I~it~G~~~al~~~~~~l~~----  112 (418)
T d2r5ea1          41 PKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINP----MTEVLVTVGAYEALYATIQGHVD----  112 (418)
T ss_dssp             CHHHHHHHHHHHTCSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCT----TTSEEEESHHHHHHHHHHHHHCC----
T ss_pred             CHHHHHHHHHHHhCCCccCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCc----cceEEEcCCCchhhhhhhhhccc----
Confidence            455667676665432   2357777788999999999999999975320    02579999999998888776643    


Q ss_pred             HhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCC--------CCccCHHHHHHHHHHHHHcCCccEEEE
Q 010842          180 AVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDA--------NFSLSPQLLRRAVEADVEAGLVPLFLC  251 (499)
Q Consensus       180 ~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~--------~~~~d~~~L~~~i~~~~~~g~~p~~vv  251 (499)
                             ++..|+++.++++.+...+...|.   .++.|++++++        .+.++.+++.+.....      +.+++
T Consensus       113 -------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~  176 (418)
T d2r5ea1         113 -------EGDEVIIIEPFFDCYEPMVKAAGG---IPRFIPLKPNKTGGTISSADWVLDNNELEALFNEK------TKMII  176 (418)
T ss_dssp             -------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEESCCSSCEEGGGEECCHHHHHHHCCTT------EEEEE
T ss_pred             -------cccceeccccccchhhHHHHHcCC---eEEEEEecccccccchhhhhhhhhHHHHhhhhhcc------cccee
Confidence                   577889999999999999999999   99999987543        2567888877765433      44788


Q ss_pred             EecCCCcccccC---ChhHHHHHHHHhCCEEEeeccccchhccCccchhh--hcCCCCCceeEecccccccCC-CcceEE
Q 010842          252 ATVGTTSTTAVD---NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY--LNGIERVDSFSFSPHKWLLSY-LDCCCL  325 (499)
Q Consensus       252 ~t~gtt~~G~id---~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~p-~~~g~l  325 (499)
                      ++.++||||.+-   .+++|+++|++|+++++.|.+|..+..........  +.+...--.+..+..|.++.| .-+|++
T Consensus       177 i~~p~NPtG~~~s~e~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~  256 (418)
T d2r5ea1         177 INTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWA  256 (418)
T ss_dssp             EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCCEEE
T ss_pred             cCCcCccccccccHHHHHHHhhhhhcCCeeeecccchhhhccCCCccccccccccccceeeeeecCCccccCCCcccccc
Confidence            899999999994   46778889999999999999997654322111111  111111124455788988755 678988


Q ss_pred             EEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHH---------hcHHHHHHHHHHHHHHH
Q 010842          326 WVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRS---------YGVLNLQSHIRSDIRLA  396 (499)
Q Consensus       326 ~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~---------~g~~g~~~~~~~~~~~a  396 (499)
                      +..+. .+ +.+.........                ..    ......++...         ...+.+++..++....+
T Consensus       257 ~~~~~-~i-~~~~~~~~~~~~----------------~~----~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~r  314 (418)
T d2r5ea1         257 YGPEA-LL-KNLQMVHQNCVY----------------TC----ATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKR  314 (418)
T ss_dssp             ESCHH-HH-HHHHHHHTTTTC----------------SC----CHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHH
T ss_pred             cccch-hh-hhhhhccccccc----------------cc----ccchhhhccccccccccccccchhhHHHHHHHHHHhh
Confidence            77553 22 222111011000                00    11111111111         12345667777788888


Q ss_pred             HHHHHHHhcCCCeEEEcCCCceEEEEEecCCCC-CC--cchhHHHHHHHHHHHHhc-CCEEEEeeeEC-------CEEEE
Q 010842          397 KMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPH-SG--SADTEMLNRKLLDWVNST-GRVYLTHTIVG-------GLYML  465 (499)
Q Consensus       397 ~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~-~~--~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~-------g~~~l  465 (499)
                      +++.+.|++. ++++..|.....+...+.+... ..  .........++.+.|.++ |++++.+..+.       +++++
T Consensus       315 ~~l~~~L~~~-g~~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~g~~~i  393 (418)
T d2r5ea1         315 DYMASFLAEV-GMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFV  393 (418)
T ss_dssp             HHHHHHHHHT-TCEEEECSBSSEEEEECGGGSTTCCGGGCCCSSHHHHHHHHHHHHHSEECBCGGGGSCGGGHHHHTTEE
T ss_pred             hhHHhhHhhc-CCcccCCCceeEEEEEcccccccccchhcccccCHHHHHHHHHHHCCEEEeCchhhCCCCCccCCCCEE
Confidence            9999999987 8887644433444445543110 00  000011234566666544 65544443332       24689


Q ss_pred             EEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          466 RFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       466 Ri~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      |++++   .++++|++.+++|+++.
T Consensus       394 Ris~~---~~~e~l~~a~~rl~~~l  415 (418)
T d2r5ea1         394 RYCFF---KKDENLQKAAEILRKWK  415 (418)
T ss_dssp             EEECC---SCHHHHHHHHHHHHHHH
T ss_pred             EEEec---CCHHHHHHHHHHHHHHH
Confidence            99986   47889999999998864

>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus circulans, subsp. alkalophilus [TaxId: 1397]

Probab=99.76  E-value=1.7e-18  Score=170.72  Aligned_cols=338  Identities=11%  Similarity=-0.024  Sum_probs=201.9

Q ss_pred             cccccCCCCCChHHHHHHHHHHHc-cc---CCcccc---cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChH
Q 010842           91 NFFAFFPATVSTAGFLGEMLCACF-NS---VGFNWL---ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTS  163 (499)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~l~~~~-n~---~~~~~~---~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt  163 (499)
                      |-++|-|++...|..+-+.+...+ |.   +....+   .++.+.++.+++++.|++++|.++++      ..++++|++
T Consensus         3 ~~~~F~pGP~~vp~~V~eam~~~~~~~~~~~~~~~~~sHRs~ef~~~~~~~r~~l~~l~~~~~~~------~i~~~~gs~   76 (361)
T d2c0ra1           3 RAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGY------KVLFIQGGA   76 (361)
T ss_dssp             CCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSE------EEEEESSHH
T ss_pred             CCcccCCCCcCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCC------EEEEECCCc
Confidence            556778888887777777666544 31   111111   26888999999999999999998653      357777777


Q ss_pred             HHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHH
Q 010842          164 DSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADV  241 (499)
Q Consensus       164 ~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~  241 (499)
                      .+++.++.....   .       ++.++++-...++.  +.+.+...|.   .+..++.+..+  ..+++.+++.+..++
T Consensus        77 t~~~ea~~~~l~---~-------~~~~~l~~~~g~~~~~~~~~~~~~g~---~~~~~~~~~~~--~~~~~~~~~~~~~~~  141 (361)
T d2c0ra1          77 STQFAMIPMNFL---K-------EGQTANYVMTGSWASKALKEAKLIGD---THVAASSEASN--YMTLPKLQEIQLQDN  141 (361)
T ss_dssp             HHHHHHHHHHHC---C-------TTCEEEEEECSHHHHHHHHHHHHHSC---EEEEEECGGGT--TCSCCCGGGCCCCTT
T ss_pred             hHHHHHHHhccc---c-------CCCceEEEeechhhhhhhhhhhhcCc---eeeeecccccc--ccchhhhhhhcccCc
Confidence            776655443321   1       23333333233333  6677888899   88888887654  678777776654332


Q ss_pred             HcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc
Q 010842          242 EAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD  321 (499)
Q Consensus       242 ~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~  321 (499)
                             +   ++.+|.||.+.|+.+|.++|+++|+.++||++.+.+....+.        ...|...+++||.++.|.+
T Consensus       142 -------~---~~v~~~tg~~~~~~~i~~~~~~~~al~~vDavss~g~~~id~--------~~~di~~~s~~k~~~~~~~  203 (361)
T d2c0ra1         142 -------A---AYLHLTSNETIEGAQFKAFPDTGSVPLIGDMSSDILSRPFDL--------NQFGLVYAGAQKNLGPSGV  203 (361)
T ss_dssp             -------E---EEEEEESEETTTTEECSSCCCCTTSCEEEECTTTTTSSCCCG--------GGCSEEEEETTTTTCCSSC
T ss_pred             -------c---eEEEEecccceecceEEEeeccCCceEEEEeecccccccccc--------ccceeEEEecccccccccC
Confidence                   1   233457889999999999999999999999998877655432        2367777788999986655


Q ss_pred             ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCC--CCcH---HHHHHHHH-hcHHHHHHHHHHHHHH
Q 010842          322 CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRR--FKSL---RLWMVLRS-YGVLNLQSHIRSDIRL  395 (499)
Q Consensus       322 ~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~--~~al---~~~~~l~~-~g~~g~~~~~~~~~~~  395 (499)
                      .++++. .+... +    .......       ..++..+.....+.  ....   .+...... ....+.....++....
T Consensus       204 ~~~~~~-~~~~~-~----~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  270 (361)
T d2c0ra1         204 TVVIVR-EDLVA-E----SPKHLPT-------MLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKK  270 (361)
T ss_dssp             EEEEEE-GGGSS-S----CCTTSCG-------GGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred             cEEEEE-hHHhh-h----Ccccccc-------ccccccccccccccccccceeeehhhhHHHhhhhccchHHHHHHHHHH
Confidence            555444 33211 1    1111000       00010000001111  1111   11111111 2234445556666666


Q ss_pred             HHHHHHHHhcCCCeEE-EcCC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccC
Q 010842          396 AKMFEGFVKSDPRFEI-VVPR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGA  471 (499)
Q Consensus       396 a~~l~~~L~~~~~~~~-~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~  471 (499)
                      +..+............ ...+   ...+++|++.+         ....+++.+.|.+.|++..++  ......+|++++ 
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~rS~~~~~~~~~~---------~~~~~~~~~~L~~~GI~~~~G--~~~~g~~RIs~~-  338 (361)
T d2c0ra1         271 ASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS---------EELEKEFVKASEQEGFVGLKG--HRSVGGLRASIY-  338 (361)
T ss_dssp             HHHHHHHHHTSTTSSEESSCGGGBCSSEEEEECSC---------HHHHHHHHHHHHHTTEESCBC--CTTTCSEEEECC-
T ss_pred             HHHhhhhhhhcccccccCCChhhccceEEEEECCC---------cccHHHHHHHHHHCCCEEecC--CCcCCeEEEEec-
Confidence            6666666655433333 2222   23567888754         233567888888888543332  111123999996 


Q ss_pred             CCCcHHHHHHHHHHHHHHHHH
Q 010842          472 SLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       472 ~~~t~~di~~l~~~l~~~~~~  492 (499)
                      ..+|.|||++|+++|+++.++
T Consensus       339 ~~~~~edv~~Lv~~l~~~~~~  359 (361)
T d2c0ra1         339 NAVPYESCEALVQFMEHFKRS  359 (361)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHh
Confidence            778999999999999997764

>d1w7la_ c.67.1.1 (A:) Kynurenine--oxoglutarate transaminase I {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Kynurenine--oxoglutarate transaminase I
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=7.7e-17  Score=161.84  Aligned_cols=338  Identities=13%  Similarity=0.075  Sum_probs=214.7

Q ss_pred             HHHHHHHHHHHcccC--CcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhH
Q 010842          103 AGFLGEMLCACFNSV--GFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDA  180 (499)
Q Consensus       103 ~~~~~~~l~~~~n~~--~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~  180 (499)
                      |..+.+.+..++...  ...|....+..++.+++.+|+.+.+|.+.+.    ..+.++|+|+++|+..++.+..+     
T Consensus        40 p~~v~~a~~~al~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~----~~~I~it~G~~~al~~~~~~l~~-----  110 (418)
T d1w7la_          40 PDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDP----LRNVLVTVGGYGALFTAFQALVD-----  110 (418)
T ss_dssp             CHHHHHHHHHHTSSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCH----HHHEEEESHHHHHHHHHHHHHCC-----
T ss_pred             CHHHHHHHHHHHhCCCcccCCCCCcCCHHHHHHHHHHHHHHhCCCCCc----ccceeeccCcHHHHHHHHHhhcc-----
Confidence            556677777766432  2357777889999999999999999986320    01468999999998887776643     


Q ss_pred             hhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCC----------CCCccCHHHHHHHHHHHHHcCCccEEE
Q 010842          181 VGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVD----------ANFSLSPQLLRRAVEADVEAGLVPLFL  250 (499)
Q Consensus       181 ~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~----------~~~~~d~~~L~~~i~~~~~~g~~p~~v  250 (499)
                            ++..|+++...+..+...+...|.   +++.++.++.          .+|.+|.+++.....+.      ..++
T Consensus       111 ------~g~~vlv~~p~~~~y~~~~~~~g~---~~v~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~------~~~i  175 (418)
T d1w7la_         111 ------EGDEVIIIEPFFDCYEPMTMMAGG---RPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSR------TKAL  175 (418)
T ss_dssp             ------TTCEEEEEESCCTTHHHHHHHTTC---EEEEEECEECC---CCSEEGGGEECCHHHHHHHCCTT------EEEE
T ss_pred             ------CCceeeccccccchhHHHHHHcCC---EeeccccccccccccccccccCcccchhhhhcccccc------ccce
Confidence                  577888899999999999999999   8888876531          23677877776654433      3478


Q ss_pred             EEecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhh--cCCCCCceeEecccccccCC-CcceE
Q 010842          251 CATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL--NGIERVDSFSFSPHKWLLSY-LDCCC  324 (499)
Q Consensus       251 v~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~l~~p-~~~g~  324 (499)
                      +.+.++||||.+   +.+++|+++|+++++++++|.+|....+..+......  .+...-..+..+..|.++.| ..+|+
T Consensus       176 ~~~~p~NPtG~~~s~~~~~~i~~~a~~~~v~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~pG~RvG~  255 (418)
T d1w7la_         176 VLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGW  255 (418)
T ss_dssp             EEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCGGGCCEE
T ss_pred             eccCcCCcccccccHHHHHHHHHHHHhcCCCchhhhhhHHhhcCCCCCCCHHHccccccccceecccCccccCCCCcccc
Confidence            899999999999   5678899999999999999999977654322222111  11111235677889987755 77899


Q ss_pred             EEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh---------cHHHHHHHHHHHHHH
Q 010842          325 LWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY---------GVLNLQSHIRSDIRL  395 (499)
Q Consensus       325 l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---------g~~g~~~~~~~~~~~  395 (499)
                      ++..+. .+ ..+.....+...                    ....+...++...+         ..+.+....++..++
T Consensus       256 ~v~~~~-~~-~~l~~~~~~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  313 (418)
T d1w7la_         256 VLGPDH-IM-KHLRTVHQNSVF--------------------HCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRC  313 (418)
T ss_dssp             EECCHH-HH-HHHHHHHHTTTS--------------------CCCHHHHHHHHHHHHHHHHTTTSTTSHHHHHHHHHHHH
T ss_pred             cccchh-hh-hhhccccccccc--------------------cccchhhHHHHHHhhhccccccccccccccchhhhhhh
Confidence            887553 22 111110000000                    00112111121111         124456667777888


Q ss_pred             HHHHHHHHhcCCCeEEEcCCCceEEEEEecCC----CCCCcchhHHHHHHHHHHHH-hcCCEEEEeeeEC-------CEE
Q 010842          396 AKMFEGFVKSDPRFEIVVPRHFALVCFRLNPY----PHSGSADTEMLNRKLLDWVN-STGRVYLTHTIVG-------GLY  463 (499)
Q Consensus       396 a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~----~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~-------g~~  463 (499)
                      ++.+.+.|++. |+++..+.....+.+++...    .......-.....+++++|. +.|++++.+..+.       +.+
T Consensus       314 r~~l~~~L~~~-g~~~~~P~gg~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~~~~~~~~~~  392 (418)
T d1w7la_         314 RDHMIRSLQSV-GLKPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFYSVPHQKHFDH  392 (418)
T ss_dssp             HHHHHHHHHTT-TCEEEECSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGSCHHHHTTSCS
T ss_pred             hhhhhhhhhhc-CCcccCCCceeEEEEECcccccccchhccccccccHHHHHHHHHHHCCEEEEcchhhcCCCccCCCCC
Confidence            88999999887 88876443333444444310    00000000011344555544 4576555544432       357


Q ss_pred             EEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          464 MLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       464 ~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      ++|+|++   .+++++++++++|+++.
T Consensus       393 ~iRis~~---~~~~~l~~a~~rl~~~~  416 (418)
T d1w7la_         393 YIRFCFV---KDEATLQAMDEKLRKWK  416 (418)
T ss_dssp             EEEEECC---CCHHHHHHHHHHHHHHH
T ss_pred             EEEEEEc---CCHHHHHHHHHHHHHHh
Confidence            8999985   57889999999998764

>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Escherichia coli [TaxId: 562]

Probab=99.74  E-value=4.5e-19  Score=174.23  Aligned_cols=342  Identities=11%  Similarity=-0.083  Sum_probs=205.1

Q ss_pred             ccccCCCCCChHHHHHHHHHHHc-ccCC---cccc---cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHH
Q 010842           92 FFAFFPATVSTAGFLGEMLCACF-NSVG---FNWL---ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSD  164 (499)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~~-n~~~---~~~~---~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~  164 (499)
                      .|+|.|++...|..+-+.+...+ |.+.   ..++   .++.+.++-+++++.+++++|.++..      ..++++|+++
T Consensus         2 ~~nF~pGP~~~p~~Vl~a~~~~~~~~~~~~~~~~~~sHRs~ef~~l~~~~r~~l~~l~~~~~~~------~v~~~~gs~t   75 (360)
T d1bjna_           2 IFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNY------KVLFCHGGGR   75 (360)
T ss_dssp             CEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTE------EEEEESSHHH
T ss_pred             eEEeCCCCcCCCHHHHHHHHHHHhhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCC------EEEEECCchH
Confidence            36788988887777777776654 3221   1111   36778888889999999999997642      3577888877


Q ss_pred             HHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH
Q 010842          165 SILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE  242 (499)
Q Consensus       165 A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~  242 (499)
                      ++..++......          ++.++++....++.  +...++..|.   .++.+..+.++  ..+.+.+++.+...+ 
T Consensus        76 ~~~~a~~~~~~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~~~-  139 (360)
T d1bjna_          76 GQFAAVPLNILG----------DKTTADYVDAGYWAASAIKEAKKYCT---PNVFDAKVTVD--GLRAVKPMREWQLSD-  139 (360)
T ss_dssp             HHHHHHHHHHCT----------TCCEEEEEESSHHHHHHHHHHTTTSE---EEEEECEEEET--TEEEECCGGGCCCCS-
T ss_pred             HHHhhhhhcccc----------cccccceecccchhhhhHHHHhhcCc---cceeeccccCC--CcchhhhhhhhccCC-
Confidence            766654433211          34445544333332  3334444454   55555544333  455555555443333 


Q ss_pred             cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842          243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC  322 (499)
Q Consensus       243 ~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~  322 (499)
                           .++++++.+|.||...|+.++.  ++.+++.+++|++.+......+..        .+|...+++||+++.|.+.
T Consensus       140 -----~~v~v~~~~~~t~~~~~~~~i~--~~~~~~~v~vDa~~~~~~~~vd~~--------~~dv~~~ss~k~~~~~~~~  204 (360)
T d1bjna_         140 -----NAAYMHYCPNETIDGIAIDETP--DFGADVVVAADFSSTILSRPIDVS--------RYGVIYAGAQKNIGPAGLT  204 (360)
T ss_dssp             -----SCSCEEECSEETTTTEECCCCC--CCCTTCCEEEECTTTTTSSCCCGG--------GCSEEEEETTTTTSSTTCE
T ss_pred             -----ceeEEEecccccccCcccccee--cccccceeeeeeeccccceeeeec--------cceeEEEEcccccccCCCc
Confidence                 2567777888999998888774  577899999999887765544332        3899999999999999888


Q ss_pred             eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC-C--cHHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 010842          323 CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF-K--SLRLWMVLRSYGVLNLQSHIRSDIRLAKMF  399 (499)
Q Consensus       323 g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~--al~~~~~l~~~g~~g~~~~~~~~~~~a~~l  399 (499)
                      +++++......  .......+...        .....+........ .  .......+......+.+...++..+.+.++
T Consensus       205 ~~~~~~~~~~~--~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (360)
T d1bjna_         205 IVIVREDLLGK--ANIACPSILDY--------SILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELL  274 (360)
T ss_dssp             EEEEEGGGCSC--CCTTSCGGGCH--------HHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred             eeEeeehhhhh--ccccCCcchhh--------HHHHhhhhhccccccchHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence            88887654321  00000000000        00000000001111 1  111222223333456667777777778888


Q ss_pred             HHHHhcCCCeEEEcCC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcH
Q 010842          400 EGFVKSDPRFEIVVPR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDE  476 (499)
Q Consensus       400 ~~~L~~~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~  476 (499)
                      .+.+...........+   ...+++|.+.+.         ...+.+.+.+.++|++..++..  ..+.+|+++. ..+|+
T Consensus       275 ~~~~~~~~~~~~~~~~~~rs~~v~~f~~~~~---------~~~~~~~~~l~~~Gi~~~~G~~--~~g~~Ris~~-~~~t~  342 (360)
T d1bjna_         275 YGVIDNSDFYRNDVAKRNRSRMNVPFQLADS---------ALDKLFLEESFAAGLHALKGHR--VVGGMRASIY-NAMPL  342 (360)
T ss_dssp             HHHHHHCSSEECCBCGGGBCSSEEEEEESSG---------GGHHHHHHHHHHTTEECCBCCT--TTCSEEEECC-TTSCH
T ss_pred             HHhhhccccccccCCcccccceEEEEEcCCc---------ccHHHHHHHHHHCCCEeecCCC--ccCeEEEEec-CCCCH
Confidence            7777776544433322   346788988542         1245677778888954433311  1123899995 78999


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010842          477 RHVVAAWELIMEGADR  492 (499)
Q Consensus       477 ~di~~l~~~l~~~~~~  492 (499)
                      |||++++++|+++.++
T Consensus       343 edV~~li~~l~e~~~~  358 (360)
T d1bjna_         343 EGVKALTDFMVEFERR  358 (360)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHH
Confidence            9999999999997654

>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Citrobacter freundii [TaxId: 546]

Probab=99.72  E-value=5.3e-16  Score=151.57  Aligned_cols=237  Identities=18%  Similarity=0.230  Sum_probs=175.0

Q ss_pred             cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh
Q 010842          121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST  200 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s  200 (499)
                      -...|....+|+.    ++++-|.+.         ++++++|..|+..++.+...           ++..|+++...+..
T Consensus        59 R~~nPT~~~LE~~----la~LEgg~~---------a~~~sSGmaAi~~~l~~ll~-----------~Gd~vi~~~~~Yg~  114 (397)
T d1y4ia1          59 RLGNPTTDALEKK----LAVLERGEA---------GLATASGISAITTTLLTLCQ-----------QGDHIVSASAIYGC  114 (397)
T ss_dssp             TTSCHHHHHHHHH----HHHHHTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSSCHH
T ss_pred             CCCCHHHHHHHHH----HHHHhCCcc---------ceeehHHHHHHHHHHhhccC-----------CCCeeeeecccccc
Confidence            3456888888888    888887654         38899998888777765533           57789999888877


Q ss_pred             HHHH----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC
Q 010842          201 FAKV----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG  276 (499)
Q Consensus       201 ~~ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~  276 (499)
                      ..+.    ....|+   ++.+++.       .|++.++++|+++++      +|.+-.++||+..+-||++|+++||++|
T Consensus       115 t~~~~~~~l~~~Gi---~~~~vd~-------~d~~~~~~~i~~~Tk------lv~~Esp~NP~l~v~Di~~i~~iA~~~g  178 (397)
T d1y4ia1         115 THAFLSHSMPKFGI---NVRFVDA-------GKPEEIRAAMRPETK------VVYIETPANPTLSLVDIETVAGIAHQQG  178 (397)
T ss_dssp             HHHHHHTHHHHTTC---EEEEECT-------TSHHHHHHHCCTTEE------EEEEESSCTTTCCCCCHHHHHHHHHHTT
T ss_pred             cchhhhcccCCCce---EeeccCC-------CCHHHHHHhcCCCCc------EEEecCCcccceeecccHHHHHHhhcCC
Confidence            5554    445688   8888864       378999999987665      8999999999999999999999999999


Q ss_pred             CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842          277 IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV  354 (499)
Q Consensus       277 ~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  354 (499)
                      ++++||..++.....-|    +..   +||.+..+..|++++..+  .|++..+++......+..... +          
T Consensus       179 i~~vvDnT~atP~~~~P----l~~---GaDivihS~TKyi~Ghsdvl~G~v~~~~~~~~~~r~~~~~~-~----------  240 (397)
T d1y4ia1         179 ALLVVDNTFMSPYCQQP----LQL---GADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFVGLKD-I----------  240 (397)
T ss_dssp             CEEEEECTTTCTTTCCG----GGG---TCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTHHHH-T----------
T ss_pred             ceEEecCcccCcccCcc----hhc---CCCEEEEehhhhcCCCcceeeeccCCCHHHHHHHHHHHHHh-C----------
Confidence            99999999987654333    222   399999999999976533  566766654322111110000 0          


Q ss_pred             ccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----------------Cc
Q 010842          355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----------------HF  417 (499)
Q Consensus       355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~  417 (499)
                               .|-...+...|+.++-+  +-+.-++++..++|..+.++|+++|.++-+.-|                 ..
T Consensus       241 ---------~G~~l~p~~a~l~~rgl--~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~h~~~~~~~~g~g  309 (397)
T d1y4ia1         241 ---------TGGCMSPFNAWLTLRGV--KTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPG  309 (397)
T ss_dssp             ---------TCCCCCHHHHHHHHHHH--TTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHCSSCC
T ss_pred             ---------cCCcCCHHHHHHHHcCc--CcHHHHHHHHHHHHHHHHHHHHhCCCcCeEeCCCCCCCccccccccccCCCC
Confidence                     11123467778777654  888999999999999999999999998654322                 35


Q ss_pred             eEEEEEecC
Q 010842          418 ALVCFRLNP  426 (499)
Q Consensus       418 ~~v~f~~~~  426 (499)
                      ++++|.+.+
T Consensus       310 g~~sf~~~~  318 (397)
T d1y4ia1         310 GIISFEIAG  318 (397)
T ss_dssp             SEEEEEETT
T ss_pred             eEEEEEecC
Confidence            678888764

>d1fg7a_ c.67.1.1 (A:) Histidinol-phosphate aminotransferase HisC {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=8.9e-16  Score=150.47  Aligned_cols=284  Identities=12%  Similarity=0.063  Sum_probs=188.3

Q ss_pred             HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCC-eEEEcCCCCchhHHHHHHHhCCC
Q 010842          133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHK-LVVYGSDQTHSTFAKVCKLAGVS  211 (499)
Q Consensus       133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~-~~i~~s~~~H~s~~ka~~~~G~g  211 (499)
                      ++++++++.+|++++       ..++|+|+++++..++.+..+           ++ .+|+++.+++..+...++..|. 
T Consensus        60 ~Lr~~ia~~~gv~pe-------~I~it~Gs~eai~~~~~~~~~-----------pgd~~Vl~~~P~y~~~~~~~~~~g~-  120 (354)
T d1fg7a_          60 AVIENYAQYAGVKPE-------QVLVSRGADEGIELLIRAFCE-----------PGKDAILYCPPTYGMYSVSAETIGV-  120 (354)
T ss_dssp             HHHHHHHHHHTSCGG-------GEEEESHHHHHHHHHHHHHCC-----------TTTCEEEECSSSCTHHHHHHHHHTC-
T ss_pred             HHHHHHHHHhCCChH-------HeeeccCchHHHHHHHHHhhc-----------cccccccccccccccchhhhhccCc-
Confidence            455669999999876       478999999998888776632           44 3688888999999999999999 


Q ss_pred             CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHH--HHhCCEEEeeccccchh
Q 010842          212 PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVA--NEYGIWVHVDAAYAGSA  289 (499)
Q Consensus       212 ~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia--~~~~~~lhvD~A~g~~~  289 (499)
                        .++.+|.++  +|.+|+++++..+.       .+.+|+.+.++|++|.+-+-+++..++  .+++.++++|.+|..+.
T Consensus       121 --~v~~~~~~~--~~~~d~~~l~~~~~-------~~~~v~~~~pnNPtG~~~~~~~~~~~~~~~~~~~~~iidd~~~~f~  189 (354)
T d1fg7a_         121 --ECRTVPTLD--NWQLDLQGISDKLD-------GVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFC  189 (354)
T ss_dssp             --EEEECCCCT--TSCCCHHHHHTSCT-------TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTTCEEEEECTTGGGS
T ss_pred             --eeecccccc--ccccchhhhhhccc-------ccceeeccCCCccceeEeeecccccccccccccccccccccchhhc
Confidence              999988864  48999999987653       234889999999999997655544433  23678888888876543


Q ss_pred             ccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCC
Q 010842          290 CICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRF  368 (499)
Q Consensus       290 ~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~  368 (499)
                      .  +...........--.+..+..|.++.| ..+|+++.. ++...........+..                       
T Consensus       190 ~--~~~~~~~~~~~~~~iv~~S~SK~~~laGlRiGy~i~~-~~~i~~l~~~~~~~~~-----------------------  243 (354)
T d1fg7a_         190 P--QASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLAN-EEVINLLMKVIAPYPL-----------------------  243 (354)
T ss_dssp             G--GGCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEEC-HHHHHHHHHHSCSSCS-----------------------
T ss_pred             c--ccccchhhcccccceEEeCCccccCCCcccccccccc-chhhhhhhhhcCccch-----------------------
Confidence            2  111111111112235567899999755 668888754 3333222111111100                       


Q ss_pred             CcHHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHH
Q 010842          369 KSLRLWMVLRSYG---VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDW  445 (499)
Q Consensus       369 ~al~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~  445 (499)
                      .......+...+.   ...+...+++..+.++++.+.+.+++++..+.++..+.+.+++..            ...+.+.
T Consensus       244 ~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~p~~~~f~~~~~~~------------~~~~~~~  311 (354)
T d1fg7a_         244 STPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILARFKA------------SSAVFKS  311 (354)
T ss_dssp             CHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEETT------------HHHHHHH
T ss_pred             hhHHHHHHHHHHhhhccccccccchhhhhHHHHHHHHHHhCCCcceeCCCCceEEEEeCCC------------HHHHHHH
Confidence            1222222222332   233455666677788889999999988776656676777777643            3457778


Q ss_pred             HHhcCCEEEEeeeE-CCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          446 VNSTGRVYLTHTIV-GGLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       446 l~~~g~~~~~~~~~-~g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      |.++|+++..+..+ +..+++|++++    |++|.++++++|+.
T Consensus       312 L~~~gIlvr~~~~~~~~~~~lRisig----t~ee~~~~l~aLka  351 (354)
T d1fg7a_         312 LWDQGIILRDQNKQPSLSGCLRITVG----TREESQRVIDALRA  351 (354)
T ss_dssp             HHHTTEECEECTTSTTCTTEEEEECC----CHHHHHHHHHHHHT
T ss_pred             HHHCCcEEecCCCCCCCCCEEEEEeC----CHHHHHHHHHHHhh
Confidence            88888655444333 22468999985    67889999988863

>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Pseudomonas putida [TaxId: 303]

Probab=99.70  E-value=5.9e-16  Score=151.16  Aligned_cols=222  Identities=17%  Similarity=0.159  Sum_probs=165.7

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF  201 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~  201 (499)
                      ...|....+|+.    ++++-|.+.         ++++++|..|+..++.+...           ++..|+++...+...
T Consensus        56 ~~nPT~~~LE~~----la~LEg~~~---------a~~~~SGmaAi~~~l~~l~~-----------~Gd~vl~~~~~Yg~t  111 (392)
T d1gc0a_          56 ISNPTLNLLEAR----MASLEGGEA---------GLALASGMGAITSTLWTLLR-----------PGDEVLLGNTLYGCT  111 (392)
T ss_dssp             -CCHHHHHHHHH----HHHHHTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEESSCCSHH
T ss_pred             CCChHHHHHHHH----HHHHhCCcc---------eeehhhHHHHHHHHHHhhcc-----------CCCeeecccccchhh
Confidence            456888889988    889988654         38889998888777766532           577888888888776


Q ss_pred             HHHHH----HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842          202 AKVCK----LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI  277 (499)
Q Consensus       202 ~ka~~----~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~  277 (499)
                      .+.++    -.|+   ++.+++.       .|+++++++|+++++      +|.+-.++||+.-+.||++|+++||++|+
T Consensus       112 ~~l~~~~~~~~Gi---~~~~~d~-------~d~~~~~~ai~~~t~------lv~~Esp~NP~l~v~Di~~i~~ia~~~g~  175 (392)
T d1gc0a_         112 FAFLHHGIGEFGV---KLRHVDM-------ADLQALEAAMTPATR------VIYFESPANPNMHMADIAGVAKIARKHGA  175 (392)
T ss_dssp             HHHHHHTGGGGTC---EEEEECT-------TCHHHHHHHCCTTEE------EEEEESSCTTTCCCCCHHHHHHHHGGGTC
T ss_pred             hhhhhhhhccCCc---ccccCCc-------cCHHHHHHhCCCCCe------EEEecccccceeeecchHHHHHHHHhcCC
Confidence            66554    3577   8888753       388999999987765      89999999999999999999999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV  355 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  355 (499)
                      .++||..|+...+.-|    +-.   +||.+..|..|++++..+  .|++..++.......+..... +           
T Consensus       176 ~~vvDnT~atP~~~~P----l~~---GaDivihS~TKyi~Ghsd~~~G~v~~~~~~~~~~r~~~~~~-~-----------  236 (392)
T d1gc0a_         176 TVVVDNTYCTPYLQRP----LEL---GADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKD-M-----------  236 (392)
T ss_dssp             EEEEECTTTHHHHCCG----GGG---TCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHH-H-----------
T ss_pred             EEEEecCccCccccCh----HHh---CCCEEEEecceeecCCcccccccccchhHHHHHHHHHHHHH-c-----------
Confidence            9999999987654322    222   399999999999976533  677776664322111110000 0           


Q ss_pred             cCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       356 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                              .|-...+...|..++-  .+.+..++++..++|..+.+.|+++|.++-+
T Consensus       237 --------~G~~~~p~da~ll~rg--l~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V  283 (392)
T d1gc0a_         237 --------TGAVLSPHDAALLMRG--IKTLNLRMDRHCANAQVLAEFLARQPQVELI  283 (392)
T ss_dssp             --------TCCCCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred             --------cCCcCChhhHHHHHhc--cccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence                    1112245677777765  4889999999999999999999999998744

>d2aeua1 c.67.1.8 (A:9-374) Hypothetical protein MJ0158 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: SelA-like
domain: Hypothetical protein MJ0158
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.70  E-value=5.1e-17  Score=160.10  Aligned_cols=162  Identities=17%  Similarity=0.120  Sum_probs=116.8

Q ss_pred             HHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcC-CCCchhHHHHHHHh
Q 010842          130 LEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGS-DQTHSTFAKVCKLA  208 (499)
Q Consensus       130 lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s-~~~H~s~~ka~~~~  208 (499)
                      ++.++.+..++.++..+..      ..++|+||++|++.++.+...           ++.+|+++ ..+|.++..++++.
T Consensus        51 ~~~~l~~~~~~~~~~~~~e------~~~~~~~~~~a~~~~l~al~~-----------~~~vi~~~~~~~~~~~~~~~~l~  113 (366)
T d2aeua1          51 FAEKVNEYGLKHLGGDEND------KCVGFNRTSSAILATILALKP-----------KKVIHYLPELPGHPSIERSCKIV  113 (366)
T ss_dssp             HHHHHHHHHHHHHTCCTTE------EEEEESSHHHHHHHHHHHHCC-----------SEEEEECSSSSCCTHHHHHHHHT
T ss_pred             hHHHHHHHHHHHccCCCcc------EEEEeCCHHHHHHHHHHHhCC-----------CCEEEEecCCCcchhHHHHHHhc
Confidence            4455555567777665431      468899999999888865421           34455554 57899999999999


Q ss_pred             CCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCc-ccccCChhHHHHHHHHhCCEEEeeccccc
Q 010842          209 GVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTS-TTAVDNVEPLAEVANEYGIWVHVDAAYAG  287 (499)
Q Consensus       209 G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~-~G~id~l~~I~~ia~~~~~~lhvD~A~g~  287 (499)
                      |.   ++  ++.+       |+++|+++|+++++      +|+.+.++|+ ++.++++++|+++|++||+|+++|++|+.
T Consensus       114 g~---~~--v~~~-------d~e~l~~~i~~~tk------~i~~~~p~n~~~~~~~~l~~i~~ia~~~~~~~i~De~y~~  175 (366)
T d2aeua1         114 NA---KY--FESD-------KVGEILNKIDKDTL------VIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGA  175 (366)
T ss_dssp             TC---EE--EEES-------CHHHHHTTCCTTEE------EEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHH
T ss_pred             CC---eE--ECCC-------CHHHHHHhcCCCce------EEEEEecCCCCcCCHHHHHHHHHHhccCcEEEEEecCccc
Confidence            88   54  4332       78999999987664      7778887664 55789999999999999999999999986


Q ss_pred             hhccCccc-hhhhcCCCCCceeEecccccccCCCcceEEEEeCc
Q 010842          288 SACICPEF-RHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQP  330 (499)
Q Consensus       288 ~~~~~~~~-~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~  330 (499)
                      ..+..... .....   .+|.++++.||.++++ .+|+++.+.+
T Consensus       176 ~~~~~~~~~~~~~~---~~di~~~S~sK~~~g~-~~G~i~~~~~  215 (366)
T d2aeua1         176 RVRLLFNQPPALKL---GADLVVTSTDKLMEGP-RGGLLAGKKE  215 (366)
T ss_dssp             HHHHHTTCCCHHHH---TCSEEEEETTSSSSSC-SCEEEEEEHH
T ss_pred             cccccccCCCHhhc---CceEEEeccccccccc-ceeEEEecHH
Confidence            54321111 11112   3899999999988755 6788877654

>d1kl1a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.68  E-value=8.3e-16  Score=148.20  Aligned_cols=337  Identities=12%  Similarity=0.074  Sum_probs=216.9

Q ss_pred             cccCCCCCChHHHHHHHHHHHc-ccCCc------ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHH
Q 010842           93 FAFFPATVSTAGFLGEMLCACF-NSVGF------NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDS  165 (499)
Q Consensus        93 ~~~~~~~~~~~~~~~~~l~~~~-n~~~~------~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A  165 (499)
                      +.-+++-......+-+.+.+.+ |.+.-      .|.......++|.-+.+...++||.....        +=..+||.|
T Consensus        26 l~LiaSEN~~S~~v~~a~~S~l~nkyaeG~pg~ryy~G~~~id~iE~la~~ra~~lF~a~~an--------Vqp~SGs~A   97 (405)
T d1kl1a_          26 IELIASENFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAEHAN--------VQPHSGAQA   97 (405)
T ss_dssp             EECCTTCCCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHCCSEEE--------CCCSSHHHH
T ss_pred             ceEeccCCcCCHHHHHHhcCcccCcCcCCCCCccccCCchhHHHHHHHHHHHHHHHhCCCcce--------eeccCchHH
Confidence            3344444433344455555544 44432      24445678899999999999999987542        566789999


Q ss_pred             HHHHHHHHHHHHHhHhhhhccCCeEEEc---CCCCchhHHHHHHH--hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHH
Q 010842          166 ILVTLIAARDRALDAVGAENMHKLVVYG---SDQTHSTFAKVCKL--AGVSPANIRALPTSVDANFSLSPQLLRRAVEAD  240 (499)
Q Consensus       166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~---s~~~H~s~~ka~~~--~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~  240 (499)
                      |+....+..+           |++.|+.   +...|.+..+....  ...   +++..|+|++ ++.+|.+++++.+++.
T Consensus        98 n~av~~all~-----------pGD~im~l~l~~GGHlshg~~~~~~g~~~---~~~~y~~d~~-~~~ID~d~l~~~a~~~  162 (405)
T d1kl1a_          98 NMAVYFTVLE-----------HGDTVLGMNLSHGGHLTHGSPVNFSGVQY---NFVAYGVDPE-THVIDYDDVREKARLH  162 (405)
T ss_dssp             HHHHHHHHCC-----------TTCEEEEECGGGTCCGGGTCTTSHHHHHS---EEEEECBCTT-TCSBCHHHHHHHHHHH
T ss_pred             HHHHHHHhcC-----------CCCEEEEeecccccccccCccccccceEE---EEEEeccchh-cccccHHHHHHHHHhh
Confidence            9877776643           5666654   34567765433322  234   6777788865 4799999999998764


Q ss_pred             HHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC
Q 010842          241 VEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL  320 (499)
Q Consensus       241 ~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~  320 (499)
                           +|.+|++-.  +.+--.-|++++.+||++.|.++++|+||-.+.+....+...   ++.||+++.+.||.|.+|.
T Consensus       163 -----kPklIi~G~--S~y~r~~d~~~~reIad~vga~l~~D~aH~~GLIa~g~~~~P---~~~aDvvt~tThKtlrGPr  232 (405)
T d1kl1a_         163 -----RPKLIVAAA--SAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNP---VPYAHFVTTTTHKTLRGPR  232 (405)
T ss_dssp             -----CCSEEEECC--SSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCS---TTTCSEEEEESSSTTCCCS
T ss_pred             -----CcceEEecc--cccccccChHHHHHHHhhhCCEEecchhhHhhhhhhhhcCCh---hhhhhheeccccccccCCC
Confidence                 365554433  445555789999999999999999999997776655444333   3569999999999999995


Q ss_pred             cceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCc-HHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 010842          321 DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKS-LRLWMVLRSYGVLNLQSHIRSDIRLAKMF  399 (499)
Q Consensus       321 ~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l  399 (499)
                       +|+++++++. . +.+...   ++.              +++++..... .+...+++......++++.++..++|+.|
T Consensus       233 -gg~I~~~~~~-~-~~i~~a---vfP--------------g~qggp~~~~iAa~Aval~Ea~~~~fk~Ya~qvv~NAkaL  292 (405)
T d1kl1a_         233 -GGMILCQEQF-A-KQIDKA---IFP--------------GIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRL  292 (405)
T ss_dssp             -CEEEEECHHH-H-HHHHHH---HTT--------------TTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred             -CceEEecchh-H-HHHHhh---hCc--------------ccccCcchhHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence             5677776532 2 221110   000              1222222222 23334444444567789999999999999


Q ss_pred             HHHHhcCCCeEEEc-CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeee-EC-----CEEEEEEec---
Q 010842          400 EGFVKSDPRFEIVV-PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTI-VG-----GLYMLRFAV---  469 (499)
Q Consensus       400 ~~~L~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~-----g~~~lRi~~---  469 (499)
                      .+.|.+. |+.++. -.+.+++.+.+.+.+.      +  .++..+.|.+.|+.+-..+. ++     ....+|+..   
T Consensus       293 a~~L~~~-G~~vv~ggTd~H~vlvdl~~~~~------~--g~~ae~~Le~agI~~Nkn~iP~d~~~~~~~SGiRiGT~a~  363 (405)
T d1kl1a_         293 ASALQNE-GFTLVSGGTDNHLLLVDLRPQQL------T--GKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAAV  363 (405)
T ss_dssp             HHHHHHT-TCEEGGGSCSSSEEEEECGGGTC------C--HHHHHHHHHHHTEECEECCCTTCSSCTTTCSEEEEECHHH
T ss_pred             HHHHhcC-CceeecCCCccceeeccccccCC------c--HHHHHHHHHHcCeEEcCCcCCCCCCCCCCCCceeecCHHH
Confidence            9999986 899985 3667778777755320      0  23333445555754322111 11     124699986   


Q ss_pred             cCCCCcHHHHHHHHHHHHHHHH
Q 010842          470 GASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       470 ~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      +.....++|+.++.+.|.++.+
T Consensus       364 TtrG~~e~dm~~ia~~I~~~l~  385 (405)
T d1kl1a_         364 TTRGFGLEEMDEIAAIIGLVLK  385 (405)
T ss_dssp             HHTTCCHHHHHHHHHHHHHHHT
T ss_pred             HhCCCCHHHHHHHHHHHHHHHh
Confidence            2234577999999998887763

>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=5.5e-15  Score=144.00  Aligned_cols=292  Identities=16%  Similarity=0.143  Sum_probs=199.2

Q ss_pred             cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh
Q 010842          121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST  200 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s  200 (499)
                      -...|-...+|+.    |+++-|.+.         ++++++|..|+..++.+...           ++..|+++...+..
T Consensus        46 R~~nPt~~~le~~----la~LEgg~~---------a~~~sSGMaAi~~~l~~l~~-----------~gd~vv~~~~~yg~  101 (384)
T d1cs1a_          46 RRGNPTRDVVQRA----LAELEGGAG---------AVLTNTGMSAIHLVTTVFLK-----------PGDLLVAPHDCYGG  101 (384)
T ss_dssp             TTCCHHHHHHHHH----HHHHHTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEETTCCHH
T ss_pred             CCCCHHHHHHHHH----HHHHhCCCc---------eEEecChHHHHHHHHhhccc-----------ccceecccccccch
Confidence            3456888999998    888888654         48899998887777665432           57788888888866


Q ss_pred             HHHHHH----HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhC
Q 010842          201 FAKVCK----LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYG  276 (499)
Q Consensus       201 ~~ka~~----~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~  276 (499)
                      ..+.+.    ..|+   .+.+++       ..|.+++++++.++++      +|.+-.++||+..+-||++|+++||++|
T Consensus       102 t~~~~~~~~~~~g~---~~~~~d-------~~d~~~~~~~~~~~t~------~v~~EspsNP~l~v~Di~~i~~ia~~~g  165 (384)
T d1cs1a_         102 SYRLFDSLAKRGCY---RVLFVD-------QGDEQALRAALAEKPK------LVLVESPSNPLLRVVDIAKICHLAREVG  165 (384)
T ss_dssp             HHHHHHHHHTTTSC---EEEEEC-------TTCHHHHHHHHHTCCS------EEEEECSCTTTCCCCCHHHHHHHHHHTT
T ss_pred             hhhhhhhhhccccc---cccccc-------CCCHHHHHhhcccccc------EEEEeccccccceeccHHHHhhhhhhcC
Confidence            544433    3355   555554       2478899999888766      8999999999999999999999999999


Q ss_pred             CEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842          277 IWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV  354 (499)
Q Consensus       277 ~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  354 (499)
                      +.++||..++...+.-|    +..   +||.+..|..|++++..+  .|+++.+++....+.. .....           
T Consensus       166 ~~~vVDNT~atP~~~~P----l~~---GaDiVvhS~TKyi~Ghsdv~~G~vv~~~~~~~~~~~-~~~~~-----------  226 (384)
T d1cs1a_         166 AVSVVDNTFLSPALQNP----LAL---GADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELA-WWANN-----------  226 (384)
T ss_dssp             CEEEEECTTTCTTTCCG----GGG---TCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHH-HHHHH-----------
T ss_pred             cEEEEeccccCcccccc----ccc---CCCEEEEccccccccCCCcccccccCCchhhhhhhh-hhhhh-----------
Confidence            99999999977654332    222   399999999999986643  5767776654332111 10000           


Q ss_pred             ccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----------------Cc
Q 010842          355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----------------HF  417 (499)
Q Consensus       355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~~  417 (499)
                               .+-.......|+.++  |.+.+.-++++..++|..+.+.|+++|.++-+.-|                 ..
T Consensus       227 ---------~G~~~~p~~a~ll~r--gL~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~h~l~~r~~~g~g  295 (384)
T d1cs1a_         227 ---------IGVTGGAFDSYLLLR--GLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFG  295 (384)
T ss_dssp             ---------HTCBCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCC
T ss_pred             ---------hhhccccccHHHHhh--ccchhHHHHHHHHHHHHHHHHhcccCCceeeeeeccccchhHHHHHHhhcCCCc
Confidence                     111224567787776  45889999999999999999999999998655322                 24


Q ss_pred             eEEEEEecCCCCCCcchhHHHHHHHHHHHHhc------CC---EEEEeeeE--C------------CEEEEEEeccCCCC
Q 010842          418 ALVCFRLNPYPHSGSADTEMLNRKLLDWVNST------GR---VYLTHTIV--G------------GLYMLRFAVGASLT  474 (499)
Q Consensus       418 ~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~------g~---~~~~~~~~--~------------g~~~lRi~~~~~~~  474 (499)
                      ++++|.+...        .+...++.+.|.--      |.   .+..+...  .            ....+|++++    
T Consensus       296 g~~sf~l~~~--------~~~a~~f~~~L~l~~~a~SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~lvRlSvG----  363 (384)
T d1cs1a_         296 AMLSFELDGD--------EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTG----  363 (384)
T ss_dssp             SEEEEEESSC--------HHHHHHHHHTCSSSEEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECC----
T ss_pred             ceeEEeecch--------HHHHHHHHHhCCcceeccccCCccceeccccccccccCCHHHHHhcCCCcCeEEEEec----
Confidence            5777877552        22334555554210      10   11111100  0            1246999996    


Q ss_pred             cHHHHHHHHHHHHHHHHHHhc
Q 010842          475 DERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       475 t~~di~~l~~~l~~~~~~l~~  495 (499)
                       -||++.+++.|++..+...+
T Consensus       364 -lEd~eDLi~Dl~~AL~aa~~  383 (384)
T d1cs1a_         364 -IEDGEDLIADLENGFRAANK  383 (384)
T ss_dssp             -SSCHHHHHHHHHHHHHHHTC
T ss_pred             -cCCHHHHHHHHHHHHHHhcC
Confidence             36777778888777766543

>d1o69a_ c.67.1.4 (A:) Aminotransferase homolog WlaK (PglE, Cj1121c) {Campylobacter jejuni [TaxId: 197]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Aminotransferase homolog WlaK (PglE, Cj1121c)
species: Campylobacter jejuni [TaxId: 197]

Probab=99.67  E-value=2.9e-16  Score=155.18  Aligned_cols=236  Identities=13%  Similarity=0.044  Sum_probs=159.5

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHH
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFA  202 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~  202 (499)
                      .||....||++    +++++|.+..         +++++||.|++.|+.+..-+          ++.+|++|..++.+..
T Consensus        19 ~G~~~~~fE~~----~~~~~~~~~~---------~~~~SgT~Al~lal~~l~~~----------~gdeVi~p~~t~~a~~   75 (374)
T d1o69a_          19 LGEFVNRFEQS----VKDYSKSENA---------LALNSATAALHLALRVAGVK----------QDDIVLASSFTFIASV   75 (374)
T ss_dssp             TTHHHHHHHHH----HHHHHCCSEE---------EEESCHHHHHHHHHHHTTCC----------TTCEEEEESSSCGGGT
T ss_pred             CCHHHHHHHHH----HHHHHCcCeE---------EEeCCHHHHHHHHHHHcCCC----------CcCEEEeCCcchHhhH
Confidence            38999999999    8899998764         99999999999999876211          4778999999999999


Q ss_pred             HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEee
Q 010842          203 KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVD  282 (499)
Q Consensus       203 ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD  282 (499)
                      .++..+|+   .++.++++++. +.++++..+.. ...+   ..+.+|++++   ..|...++++|.++|+++|++|+.|
T Consensus        76 ~~~~~~g~---~pv~~Di~~~~-~~~~~~~~~~~-~~~~---~~~~aii~~~---~~G~~~d~~~i~~~~~~~~i~vIED  144 (374)
T d1o69a_          76 APICYLKA---KPVFIDCDETY-NIDVDLLKLAI-KECE---KKPKALILTH---LYGNAAKMDEIVEICKENDIVLIED  144 (374)
T ss_dssp             HHHHHTTC---EEEEECBCTTS-SBCHHHHHHHH-HHCS---SCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEE
T ss_pred             HHHhhccc---eeEeccccccc-ccccccccccc-hhcc---cccccccccc---cccchhhhHHHHHHhhccCcchhhh
Confidence            99999999   99999998643 34444433322 2211   1123555555   5788999999999999999999999


Q ss_pred             ccccchhccCccchhhhcC-CCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcc
Q 010842          283 AAYAGSACICPEFRHYLNG-IERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQ  361 (499)
Q Consensus       283 ~A~g~~~~~~~~~~~~~~g-~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~  361 (499)
                      +|++.+...    .....| ...+-.+++.+.|.+.+. +.|++++.+++...+............         .....
T Consensus       145 ~a~a~g~~~----~~~~~G~~gd~~~fSf~~~K~l~tg-eGG~i~tnn~~~~~~~~~~~~~g~~~~---------~~~~~  210 (374)
T d1o69a_         145 AAEALGSFY----KNKALGTFGEFGVYSYNGNKIITTS-GGGMLIGKNKEKIEKARFYSTQARENC---------LHYEH  210 (374)
T ss_dssp             CTTCTTCEE----TTEETTSSSSEEEEECCTTSSSCCS-SCEEEEESCHHHHHHHHHHTBTCCCSS---------SSCCC
T ss_pred             hhhhhcceE----CCeecCCCCceEEEeccCccccccc-cceeehhhhHHHHHhhccccccccccc---------ccccc
Confidence            999776432    222222 223445666667888764 668888888765543322211110000         00011


Q ss_pred             cCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010842          362 VGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD  406 (499)
Q Consensus       362 ~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~  406 (499)
                      ...|..++...+.+++-....+.+.+++++..++++++.+.|...
T Consensus       211 ~~~G~N~rm~ei~Aaig~~qL~~l~~~i~~r~~i~~~y~~~L~~~  255 (374)
T d1o69a_         211 LDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKEFLGEY  255 (374)
T ss_dssp             SSCCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             ccCCccccccchhhhhhHHHHhhhhhhcchhHHHHHHHHhhcccc
Confidence            122333344444444444445788889999999999999999865

>d1dfoa_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Escherichia coli [TaxId: 562]

Probab=99.66  E-value=2.2e-15  Score=145.90  Aligned_cols=312  Identities=12%  Similarity=0.055  Sum_probs=205.5

Q ss_pred             cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEc---CCCC
Q 010842          121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYG---SDQT  197 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~---s~~~  197 (499)
                      |.......++|.-+.+...++||.....        +-..||+.||+.++.+..+           |+..|+.   +...
T Consensus        64 y~G~~~iD~iE~la~~ra~~lF~a~~an--------Vqp~SGs~AN~av~~All~-----------pGD~Il~l~l~~GG  124 (416)
T d1dfoa_          64 YGGCEYVDIVEQLAIDRAKELFGADYAN--------VQPHSGSQANFAVYTALLE-----------PGDTVLGMNLAHGG  124 (416)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHHHTCSEEE--------CCCSSHHHHHHHHHHHHCC-----------TTCEEEEECTTTTC
T ss_pred             cCCChhHHHHHHHHHHHHHHHhCCCcce--------eecccCccHHHHHHHHhcC-----------CCCeeeeccccccc
Confidence            3344567899999999999999987542        6677999999888877643           5656654   4445


Q ss_pred             chhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842          198 HSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI  277 (499)
Q Consensus       198 H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~  277 (499)
                      |.+....+...|..- +.+..+++++  +.+|.+++++...+.+     |-+|++-  .+.+.-.-|++++.+||++.|.
T Consensus       125 Hlshg~~~~~~g~~~-~~~~y~~d~~--~~IDyd~l~~~a~~~k-----PklIi~G--~S~y~r~~d~~~~reiad~vga  194 (416)
T d1dfoa_         125 HLTHGSPVNFSGKLY-NIVPYGIDAT--GHIDYADLEKQAKEHK-----PKMIIGG--FSAYSGVVDWAKMREIADSIGA  194 (416)
T ss_dssp             CGGGTCTTSHHHHHS-EEEEECBCSS--SSBCHHHHHHHHHHHC-----CSEEEEE--CSSCCSCCCHHHHHHHHHHTTC
T ss_pred             cccccccccccCceE-EEEecccCCc--cCccHHHHHHHHHHhc-----cceEEec--ccccccccCHHHHHHHHHhcCc
Confidence            666544333333311 5566666654  4899999999987743     6566644  4556777899999999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCc-hhHHHhhcCCccCCCCCCCCCCCccc
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQP-GLLVKALSTDPEYLKNKPSESNSVVD  356 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~-~~l~~~~~~~~~yl~~~~~~~~~~~~  356 (499)
                      ++++|.||-.+.+....+...   ++.+|+++.+.||.|.+|. +|++++++. +.+.+.+...   ++.          
T Consensus       195 ~l~~D~aH~~GLIa~g~~~sP---~~~aDvvt~tThKtlrGPr-ggiI~~~~~~~~~~~~i~~a---vfP----------  257 (416)
T d1dfoa_         195 YLFVDMAHVAGLVAAGVYPNP---VPHAHVVTTTTHKTLAGPR-GGLILAKGGSEELYKKLNSA---VFP----------  257 (416)
T ss_dssp             EEEEECTTTHHHHHHTSSCCC---TTTSSEEEEESSSTTCCCS-CEEEEESSCCHHHHHHHHHH---HTT----------
T ss_pred             eEEcchhhhhcceeccccCCc---ccccceeeeehhhcccCCC-ceEEEeccchHhHHHHHHhh---hCc----------
Confidence            999999997765543333322   3459999999999999984 677777643 2222221110   000          


Q ss_pred             CCCcccCCCCCCCc-HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CCCceEEEEEecCCCCCCcch
Q 010842          357 FKDWQVGTGRRFKS-LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PRHFALVCFRLNPYPHSGSAD  434 (499)
Q Consensus       357 ~~~~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~  434 (499)
                          +++++..... .+...+++......++++.++..++|+.|.+.|.+. |++++. ..+.+++.+.+.+.+      
T Consensus       258 ----g~qggp~~~~iaa~Aval~Ea~~~~fk~Y~~qvv~NA~~La~~L~~~-G~~iv~ggTdnHlvlvdl~~~~------  326 (416)
T d1dfoa_         258 ----GGQGGPLMHVIAGKAVALKEAMEPEFKTYQQQVAKNAKAMVEVFLER-GYKVVSGGTDNHLFLVDLVDKN------  326 (416)
T ss_dssp             ----TTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT------
T ss_pred             ----ccccCccHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhC-CcccccCCCCCceeEEEecccC------
Confidence                1222222222 233455555455678999999999999999999997 999985 466777777775532      


Q ss_pred             hHHHHHHHHHHHHhcCCEEEEeeeE------CCEEEEEEecc---CCCCcHHHHHHHHHHHHHHHH
Q 010842          435 TEMLNRKLLDWVNSTGRVYLTHTIV------GGLYMLRFAVG---ASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       435 ~~~~~~~l~~~l~~~g~~~~~~~~~------~g~~~lRi~~~---~~~~t~~di~~l~~~l~~~~~  491 (499)
                        ...+...+.|.+.|+.+-..+..      .....+|+...   .....++|++++.+.|.++.+
T Consensus       327 --~~G~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~SGiRiGT~a~TtrG~~e~d~~~iA~~I~~~l~  390 (416)
T d1dfoa_         327 --LTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLD  390 (416)
T ss_dssp             --CCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             --CCHHHHHHHHHHcCeEEeCCcCCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence              01244455555667543221111      11246999872   233467999999888877764

>d2f8ja1 c.67.1.1 (A:1-334) Histidinol-phosphate aminotransferase HisC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Histidinol-phosphate aminotransferase HisC
species: Thermotoga maritima [TaxId: 2336]

Probab=99.66  E-value=5e-14  Score=136.64  Aligned_cols=297  Identities=12%  Similarity=0.039  Sum_probs=188.1

Q ss_pred             HHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhh
Q 010842          104 GFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGA  183 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~  183 (499)
                      ..+.+.+...++.....|...++..++.+++.+|+.+. +.+.+       ..++|+|+++++...+.+           
T Consensus        35 ~~i~~~~~~~~~~~~~~~yp~~g~~~Lr~aia~~~~~~-~v~~d-------~I~it~G~~~~l~~l~~~-----------   95 (334)
T d2f8ja1          35 EDLVDEVFRRLNSDALRIYYDSPDEELIEKILSYLDTD-FLSKN-------NVSVGNGADEIIYVMMLM-----------   95 (334)
T ss_dssp             HHHHHHHHHHCCTTGGGSCCCSSCHHHHHHHHHHHTCS-SCCGG-------GEEEEEHHHHHHHHHHHH-----------
T ss_pred             HHHHHHHHHHhhcchhcCCCCCCcHHHHHHHHHHhccc-CCCcc-------eEEecCcchhHHHHHhhh-----------
Confidence            34455556666665555555567778888877666432 34443       467888887776544321           


Q ss_pred             hccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC
Q 010842          184 ENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD  263 (499)
Q Consensus       184 ~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id  263 (499)
                          ...|++..+++..+..+++.+|+   +++.||++++.  ..+-     ..      ...+.+++.+.++|++|.+-
T Consensus        96 ----~d~v~i~~P~y~~~~~~~~~~g~---~~v~v~~~~~~--~~~~-----~~------~~~~~~l~l~nP~NPtG~~~  155 (334)
T d2f8ja1          96 ----FDRSVFFPPTYSCYRIFAKAVGA---KFLEVPLTKDL--RIPE-----VN------VGEGDVVFIPNPNNPTGHVF  155 (334)
T ss_dssp             ----SSEEEECSSCCHHHHHHHHHHTC---CEEECCCCTTS--CCCC-----CC------CCTTEEEEEESSCTTTCCCC
T ss_pred             ----ccccccccccccccccchhccCC---ccccccccccc--cccc-----cc------cccceEEEecccccccceee
Confidence                23477788899999999999999   99999998754  3321     01      11234678889999999999


Q ss_pred             ChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCcc
Q 010842          264 NVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPE  342 (499)
Q Consensus       264 ~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~  342 (499)
                      +.++|.+++ ++++++++|.+|.........  ..... ..--.++.+..|.++.| ..+|+++... ... ..+.....
T Consensus       156 s~~~l~~~~-~~~~~ii~Dd~~~~~~~~~~~--~~~~~-~~~~i~~~S~SK~~~~~G~R~G~~~~~~-~~i-~~l~~~~~  229 (334)
T d2f8ja1         156 EREEIERIL-KTGAFVALDEAYYEFHGESYV--DFLKK-YENLAVIRTFSKAFSLAAQRVGYVVASE-KFI-DAYNRVRL  229 (334)
T ss_dssp             CHHHHHHHH-TTTCEEEEECTTGGGTCCCCG--GGGGT-CSSEEEEEESTTTSSCTTTCEEEEEECH-HHH-HHHHHHSC
T ss_pred             cHHHhhccc-cceeEEeecccchhhcccccc--ccccc-CceEEEEecCccccchhhhhhhhcccch-HHH-HHHHHhhc
Confidence            998887764 578999999988554322111  11111 11235677899987755 5788887743 322 22211100


Q ss_pred             CCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCCceEEE
Q 010842          343 YLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRS-YGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRHFALVC  421 (499)
Q Consensus       343 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~-~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~  421 (499)
                      +.                      ........++... ...+.+++..++..+.++++.+.|+++ |+++. ++..+.+.
T Consensus       230 ~~----------------------~~s~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~g~f~~  285 (334)
T d2f8ja1         230 PF----------------------NVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYRIT-DSRGNFVF  285 (334)
T ss_dssp             TT----------------------CSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH-TCEEC-CCCSSEEE
T ss_pred             cc----------------------ccchhhhhhcccccccccchhhHHHHHHHHHHHHHHHHHHC-CCeEC-CCCceEEE
Confidence            00                      0011111111111 134667777888888889999999988 78876 55656555


Q ss_pred             EEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHH
Q 010842          422 FRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIME  488 (499)
Q Consensus       422 f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~  488 (499)
                      +.+..          ...+++.+.|.++|+. +.+  +  ..++|++++    +.+|+++++++|++
T Consensus       286 ~~~~~----------~~~~~~~~~L~~~GI~-vr~--~--~~~vRis~g----~~ee~~~l~~~l~~  333 (334)
T d2f8ja1         286 VFMEK----------EEKERLLEHLRTKNVA-VRS--F--REGVRITIG----KREENDMILRELEV  333 (334)
T ss_dssp             EECCH----------HHHHHHHHHHHHTTEE-CEE--E--TTEEEEECC----CHHHHHHHHHHHHH
T ss_pred             EECCC----------CCHHHHHHHHHHCCCE-ECC--C--CCeEEEEcC----CHHHHHHHHHHHhc
Confidence            44422          2356788888888854 332  2  257999985    56788999998875

>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Phosphoserine aminotransferase, PSAT
species: Bacillus alcalophilus [TaxId: 1445]

Probab=99.64  E-value=2.9e-16  Score=154.22  Aligned_cols=339  Identities=12%  Similarity=-0.041  Sum_probs=182.0

Q ss_pred             ccccCCCCCChHHHHHHHHHHHcccC-C---cccc---cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHH
Q 010842           92 FFAFFPATVSTAGFLGEMLCACFNSV-G---FNWL---ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSD  164 (499)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~~n~~-~---~~~~---~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~  164 (499)
                      -|.|-|++...|..+-+.+...+... .   ....   .++.+.++-+++++.++++++.+++.      ..++++|+++
T Consensus         4 ~~nF~pGP~~~p~~V~~a~~~~~~~~~~~~~~~~~~sHRs~~~~~~~~~~r~~l~~l~~~~~~~------~i~~~~gt~~   77 (360)
T d1w23a_           4 VFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDY------QILFLQGGAS   77 (360)
T ss_dssp             CEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTE------EEEEESSHHH
T ss_pred             eeEeCCCCcCCCHHHHHHHHHHHHhhcccCccccccCcCCHHHHHHHHHHHHHHHHHhCCCCCC------EEEEeCCcHH
Confidence            46677888877777777776644221 1   1111   36778889999999999999998753      3567777766


Q ss_pred             HHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh--HHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHH
Q 010842          165 SILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST--FAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVE  242 (499)
Q Consensus       165 A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s--~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~  242 (499)
                      ++..+.......          ++..+++....|++  +...+...+.   .++.+......  ..+++.++..+..   
T Consensus        78 ~~~~~~~~~~~~----------~~~~v~~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~~~~---  139 (360)
T d1w23a_          78 LQFTMLPMNLLT----------KGTIGNYVLTGSWSEKALKEAKLLGE---THIAASTKANS--YQSIPDFSEFQLN---  139 (360)
T ss_dssp             HHHHHHHHHHCC----------TTCEEEEEECSHHHHHHHHHHHTTSE---EEEEEECGGGT--SCSCCCGGGCCCC---
T ss_pred             HHHHHHHhhhcc----------cCcccceeeccchhhhhHHHHHHhhh---cceeecccccc--ccchhhhhhcccc---
Confidence            665444333211          23334333333333  3344444454   45554433222  2333333332211   


Q ss_pred             cCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcc
Q 010842          243 AGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDC  322 (499)
Q Consensus       243 ~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~  322 (499)
                             +..++.+|.+|.+.|+++|+++|+++|+.++|||+.+.+....+--.     + .+|.++++.||++  |.+.
T Consensus       140 -------~~~~~~~~~tg~~~~~~~i~~~~~~~g~l~ivDavqs~g~~~id~~~-----~-~vd~~~~~~~k~~--~~~~  204 (360)
T d1w23a_         140 -------ENDAYLHITSNNTIYGTQYQNFPEINHAPLIADMSSDILSRPLKVNQ-----F-GMIYAGAQKNLGP--SGVT  204 (360)
T ss_dssp             -------TTEEEEEEESEETTTTEECSSCCCCCSSCEEEECTTTTTSSCCCGGG-----C-SEEEEETTTTTSC--TTCE
T ss_pred             -------cccceeEecCCccccceeeeeccccceeeEEeecccccccccccccc-----c-cceEEeecccccc--CCcc
Confidence                   22345567889999999999999999999999999887765543211     1 3677777777754  4455


Q ss_pred             eEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCC--cHHHHHHHHH-hcHHHHHHHHHHHHHHHHHH
Q 010842          323 CCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFK--SLRLWMVLRS-YGVLNLQSHIRSDIRLAKMF  399 (499)
Q Consensus       323 g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~--al~~~~~l~~-~g~~g~~~~~~~~~~~a~~l  399 (499)
                      |+++.+....  +.......+....        ....+.........  .......+.. ....+.....++....+...
T Consensus       205 ~~~~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (360)
T d1w23a_         205 VVIVKKDLLN--TKVEQVPTMLQYA--------THIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKII  274 (360)
T ss_dssp             EEEEEHHHHC--SCCTTCCGGGCHH--------HHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred             eeeEechhhh--cccccCCcchhhh--------hhhhhhhhcccccceeeechhHHHHHHhhhhhhHHHHHHHHHHHHHH
Confidence            5555433211  0001111111000        00000000011111  1111111111 11122233333444444444


Q ss_pred             HHHHhcCCCeEEE-cCC---CceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCc
Q 010842          400 EGFVKSDPRFEIV-VPR---HFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTD  475 (499)
Q Consensus       400 ~~~L~~~~~~~~~-~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t  475 (499)
                      .........+..+ ..+   ...+++|.+.+         ....+.+.+.|.++|++...+..  ....+|+++. ..+|
T Consensus       275 ~~~~~~~~~~~~~~~~~~~rS~~vvsf~i~~---------~~~~~~~~~~l~~~GI~~~~G~~--~~ggiRiS~~-~~~t  342 (360)
T d1w23a_         275 YDTIDESNGFYVGHAEKGSRSLMNVTFNLRN---------EELNQQFLAKAKEQGFVGLNGHR--SVGGCRASIY-NAVP  342 (360)
T ss_dssp             HHHHHTTTTSSEESSCGGGBCSSEEEEECSS---------HHHHHHHHHHHHHTTEESCBCCT--TTCSEEEECC-TTSC
T ss_pred             HHHHhhcccccccCCChhhcceeEEEEEcCC---------CccHHHHHHHHHHCCCeeeeCCC--ccCcEEEEee-CCCC
Confidence            4444444333333 222   23478898854         23456788888888954333211  1123899984 6789


Q ss_pred             HHHHHHHHHHHHHHHH
Q 010842          476 ERHVVAAWELIMEGAD  491 (499)
Q Consensus       476 ~~di~~l~~~l~~~~~  491 (499)
                      .|||++|++.|++.-+
T Consensus       343 ~e~V~~Li~~~~~~~~  358 (360)
T d1w23a_         343 IDACIALRELMIQFKE  358 (360)
T ss_dssp             HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh
Confidence            9999999999998755

>d7aata_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Chicken (Gallus gallus), mitochondria [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Chicken (Gallus gallus), mitochondria [TaxId: 9031]

Probab=99.63  E-value=1.3e-14  Score=144.48  Aligned_cols=323  Identities=12%  Similarity=0.049  Sum_probs=192.4

Q ss_pred             HHHHHHHHHHcccCC-cccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCC-hHHHHHHHHHHHHHHHHhHh
Q 010842          104 GFLGEMLCACFNSVG-FNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNT-TSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       104 ~~~~~~l~~~~n~~~-~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~g-gt~A~~~al~~ar~~~~~~~  181 (499)
                      ..+.+......+... ..|....+..+|.+++.+|+.+..+.....     ...+.+.+ ++.....++........   
T Consensus        49 ~~V~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~-----~~i~~~~~~~~~g~~~~~~~~~~~l~---  120 (401)
T d7aata_          49 NCVRKAEAMIAAKKMDKEYLPIAGLADFTRASAELALGENSEAFKS-----GRYVTVQGISGTGSLRVGANFLQRFF---  120 (401)
T ss_dssp             HHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHT-----TCEEEEEEEHHHHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhccCCcccCc-----CceEEeccchHHHHHHHHHHhhHhhc---
Confidence            445555555544333 468888899999999999998876652110     01122222 22222223322222221   


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                          .++..|+++++.+..+...++..|.   +++.+|+.+++++..|.+.+.+.+...   ..+..+++.+.++||||.
T Consensus       121 ----~pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~iii~~p~NPTG~  190 (401)
T d7aata_         121 ----KFSRDVYLPKPSWGNHTPIFRDAGL---QLQAYRYYDPKTCSLDFTGAMEDISKI---PEKSIILLHACAHNPTGV  190 (401)
T ss_dssp             ----TTCCEEEEEESCCTTHHHHHHHTTC---EEEEEECEETTTTEECHHHHHHHHTTS---CTTCEEEEESSSCTTTCC
T ss_pred             ----CCCceEEEecCCCcchhhHHHHcCC---eEEEEeccccccccccHHHHHHHHhcC---CCceEEEEecCCCCCccc
Confidence                1678899999999999999999999   999999977667899999998887542   223468888999999999


Q ss_pred             c---CChhHHHHHHHHhCCEEEeeccccchhccCccchh-----hhcCCCCCceeEecccccccCC-CcceEEEEeCchh
Q 010842          262 V---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH-----YLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGL  332 (499)
Q Consensus       262 i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~-----~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~  332 (499)
                      +   +.+++|+++|++|+++++.|.+|....+.......     ........ .+..+..|.++.| .-+|++.......
T Consensus       191 ~~s~e~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~s~sk~~~~~G~RiG~~~~~~~~~  269 (401)
T d7aata_         191 DPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDV-VLSQSYAKNMGLYGERAGAFTVICRDA  269 (401)
T ss_dssp             CCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCC-EEEEECTTTSCCGGGCEEEEEEECSSH
T ss_pred             cCCHHHHHHHHHHHhcceEEEEEeccchhhhcCCcccchhhhhhhhhhhccc-ceeEeccccceeeccccceeecchHHH
Confidence            9   56789999999999999999999887543211111     11111112 3334555655544 5688888765421


Q ss_pred             --HHHhh---c--CCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--------cHHHHHHHHHHHHHHHH
Q 010842          333 --LVKAL---S--TDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--------GVLNLQSHIRSDIRLAK  397 (499)
Q Consensus       333 --l~~~~---~--~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--------g~~g~~~~~~~~~~~a~  397 (499)
                        ..+..   .  ....+...                      .++........+        ....++++.++..++++
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~----------------------~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~  327 (401)
T d7aata_         270 EEAKRVESQLKILIRPMYSNP----------------------PMNGARIASLILNTPELRKEWLVEVKGMADRIISMRT  327 (401)
T ss_dssp             HHHHHHHHHHHHHHHHHHSSC----------------------CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcccccc----------------------chHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence              10100   0  00001100                      112222222222        12345566666777888


Q ss_pred             HHHHHHhcCCC---eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCC
Q 010842          398 MFEGFVKSDPR---FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLT  474 (499)
Q Consensus       398 ~l~~~L~~~~~---~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~  474 (499)
                      .+.+.|++...   |..+ +|+.+.+++  .+..           .+++++|.++..+++.++       .|++++  ..
T Consensus       328 ~l~~~L~~~~~~~~~~~~-~~~~G~F~~--~~ls-----------~e~~~~L~~e~gV~~~pg-------~Ris~a--~~  384 (401)
T d7aata_         328 QLVSNLKKEGSSHNWQHI-TDQIGMFCF--TGLK-----------PEQVERLTKEFSIYMTKD-------GRISVA--GV  384 (401)
T ss_dssp             HHHHHHHHTTCCSCCHHH-HHCCSSEEE--CCCC-----------HHHHHHHHHHHCEECCTT-------CEEEGG--GC
T ss_pred             HHHHHHHHhCCCCCcceE-CCCCeEEEe--cCCC-----------HHHHHHHHHhCCEEECCC-------cEEEec--cC
Confidence            88888887632   2222 234344443  2211           223455544333444442       599985  35


Q ss_pred             cHHHHHHHHHHHHHHH
Q 010842          475 DERHVVAAWELIMEGA  490 (499)
Q Consensus       475 t~~di~~l~~~l~~~~  490 (499)
                      ++++|+++.++|.++.
T Consensus       385 ~~~~i~~la~ai~~v~  400 (401)
T d7aata_         385 ASSNVGYLAHAIHQVT  400 (401)
T ss_dssp             CTTTHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHh
Confidence            6778999999998875

>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.62  E-value=7.4e-15  Score=143.00  Aligned_cols=220  Identities=17%  Similarity=0.230  Sum_probs=161.5

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF  201 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~  201 (499)
                      ...|-...+|+.    ++.+-|.+.         ++++++|..|+ .++.....           ++..|+++...|...
T Consensus        46 ~~nPt~~~le~~----la~LE~~~~---------a~~fsSGMaAi-sall~ll~-----------~Gd~vv~~~~~Yg~t  100 (380)
T d1ibja_          46 SGNPTRDALESL----LAKLDKADR---------AFCFTSGMAAL-SAVTHLIK-----------NGEEIVAGDDVYGGS  100 (380)
T ss_dssp             TCCHHHHHHHHH----HHHHHTCSE---------EEEESSHHHHH-HHHHTTSC-----------TTCEEEEESSCCHHH
T ss_pred             CCChHHHHHHHH----HHHHcCCce---------EEehhhHHHHH-HHHHHhhC-----------CCCEEEEEecccccc
Confidence            456888888888    888887654         48888887665 45543321           567888898888877


Q ss_pred             HHHHHH----hCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCC
Q 010842          202 AKVCKL----AGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGI  277 (499)
Q Consensus       202 ~ka~~~----~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~  277 (499)
                      .+.++.    .|+   .+.+++.       .|+++++++++++++      +|.+-.++||+..+-||++|+++||++|+
T Consensus       101 ~~l~~~~~~~~gi---~~~~~d~-------~~~~~~~~ai~~~t~------li~~EtpsNP~l~v~Di~~i~~iA~~~g~  164 (380)
T d1ibja_         101 DRLLSQVVPRSGV---VVKRVNT-------TKLDEVAAAIGPQTK------LVWLESPTNPRQQISDIRKISEMAHAQGA  164 (380)
T ss_dssp             HHHHHHTSGGGTC---EEEEECT-------TSHHHHHHHCCSSEE------EEEECSSCTTTCCCCCHHHHHHHHHTTTC
T ss_pred             cchhhhhhccccc---cccccCc-------chHHHHHHHhccCcc------EEEeccccccccccccHHHHHHHHHHcCC
Confidence            766654    466   6666653       378889888866554      89999999999999999999999999999


Q ss_pred             EEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcc
Q 010842          278 WVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVV  355 (499)
Q Consensus       278 ~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~  355 (499)
                      +++||..++.....-|    +..   +||.+..|..|++++..+  .|++.+++.....+.... ..             
T Consensus       165 ~~vVDnT~atP~~~~P----l~~---GaDiVvhS~TKyi~GhsDv~~G~v~~~~~~~~~~~~~~-~~-------------  223 (380)
T d1ibja_         165 LVLVDNSIMSPVLSRP----LEL---GADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFL-QN-------------  223 (380)
T ss_dssp             EEEEECTTTCTTTCCG----GGT---TCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHH-HH-------------
T ss_pred             eEEeeccccccccccc----ccc---CCCEEEecccceeccccCccccccccchhhHHHHHHhh-cc-------------
Confidence            9999999987654332    222   399999999999987643  566667665433211110 00             


Q ss_pred             cCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          356 DFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       356 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                             ..|....+...|+.++-  .+.+..++++..++|..+++.|+++|.++-+
T Consensus       224 -------~~G~~l~p~~a~ll~rg--l~Tl~lRm~~~~~nA~~lA~~L~~hp~V~~V  271 (380)
T d1ibja_         224 -------SEGSGLAPFDCWLCLRG--IKTMALRIEKQQENARKIAMYLSSHPRVKKV  271 (380)
T ss_dssp             -------HTTCBCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHTCTTCCEE
T ss_pred             -------ccCCcCCHHHHHHHHhc--chhhhhhHHHHHHHHHHHHHHHHhCCCeeEE
Confidence                   01222345677777775  4889999999999999999999999998644

>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL1 [TaxId: 5722]

Probab=99.61  E-value=8.2e-14  Score=136.35  Aligned_cols=293  Identities=18%  Similarity=0.214  Sum_probs=198.3

Q ss_pred             cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh
Q 010842          121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST  200 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s  200 (499)
                      -...|-...+|+.    ++++-|.+..         +.+++|..|+..++.+...           ++..|+++...+..
T Consensus        55 R~~nPT~~~le~~----la~LEg~~~a---------~~~sSGmaAi~~~~l~l~~-----------~gd~vv~~~~~yg~  110 (394)
T d1e5ea_          55 RLGNPTVSNLEGK----IAFLEKTEAC---------VATSSGMGAIAATVLTILK-----------AGDHLISDECLYGC  110 (394)
T ss_dssp             TTCCHHHHHHHHH----HHHHHTCSEE---------EEESSHHHHHHHHHHHHCC-----------TTCEEEEESCCCHH
T ss_pred             CCCCHHHHHHHHH----HHHHhCCcce---------eeeccchHHHHHHHHhhcc-----------cccccccccceeeh
Confidence            3456888889988    8888887554         8888998887777665432           57788888887765


Q ss_pred             HH----HHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHH-Hh
Q 010842          201 FA----KVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVAN-EY  275 (499)
Q Consensus       201 ~~----ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~-~~  275 (499)
                      ..    +...-.|+   .+.+++..       |+++++++|+++++      +|.+-.++||+..+-|+++++++++ ++
T Consensus       111 t~~~~~~~~~~~gi---~~~~~d~~-------d~~~~~~~i~~~t~------lv~~Etp~NP~l~v~Di~~~~~~~~~~~  174 (394)
T d1e5ea_         111 THALFEHALTKFGI---QVDFINTA-------IPGEVKKHMKPNTK------IVYFETPANPTLKIIDMERVCKDAHSQE  174 (394)
T ss_dssp             HHHHHHTHHHHTTC---EEEEECTT-------STTHHHHHCCTTEE------EEEEESSCTTTCCCCCHHHHHHHHHTST
T ss_pred             hhHhHHHHhhccce---eeeccCCC-------CHHHHHHhhccccc------EEEEeccCCcceeeehhhhhhhcccccc
Confidence            44    34556788   88888753       56788998877665      8999999999999999999988765 47


Q ss_pred             CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842          276 GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNS  353 (499)
Q Consensus       276 ~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~  353 (499)
                      |+.++||..++.....-|    +-.   +||.+..|..|++++..+  +|++..+++.........    +..       
T Consensus       175 g~~vvvDnT~atP~~~~P----l~~---GaDiVvhS~TKy~~GhsDv~~G~v~~~~~~~~~~~~~~----~~~-------  236 (394)
T d1e5ea_         175 GVLVIADNTFCSPMITNP----VDF---GVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMVG----IKD-------  236 (394)
T ss_dssp             TCEEEEECTTTCTTTCCG----GGG---TCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHTC----CCC-------
T ss_pred             CeEEEecCcccCcccCCc----hhc---CCCEEEechhhhcCCCcccccccccchhhHHHHHHHHH----HHH-------
Confidence            899999999977654322    222   399999999999987644  677776654332111111    100       


Q ss_pred             cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-C-----C-----------C
Q 010842          354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-P-----R-----------H  416 (499)
Q Consensus       354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~-----~-----------~  416 (499)
                               ..|-.......|..++-  .+.+..++++..++|..+.++|+++|.++-+. |     |           .
T Consensus       237 ---------~~G~~lsp~~a~ll~rg--l~TL~lRm~r~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~  305 (394)
T d1e5ea_         237 ---------ITGSVISPHDAWLITRG--LSTLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMY  305 (394)
T ss_dssp             ---------CCCCCCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSC
T ss_pred             ---------hhCCCCChHHHHHHHhh--chhHHHHHHHHHHHHHHHHHHHhhcCCccEEeCCCcccccchhhhhcccccC
Confidence                     01222345677777664  48899999999999999999999999986443 2     1           2


Q ss_pred             ceEEEEEecCCCCCCcchhHHHHHHHHHHHH--hcC----C---EEEEeee-----E-------C--CEEEEEEeccCCC
Q 010842          417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVN--STG----R---VYLTHTI-----V-------G--GLYMLRFAVGASL  473 (499)
Q Consensus       417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~--~~g----~---~~~~~~~-----~-------~--g~~~lRi~~~~~~  473 (499)
                      ..+++|.+...        .+...++.+.|.  ..+    .   .+..+..     +       .  ..+.+|+|++   
T Consensus       306 G~~~sf~~~~~--------~~~a~~f~~~l~l~~~a~SlGg~eSLi~~p~~~th~~~~~~~r~~~Gi~~~liRlSVG---  374 (394)
T d1e5ea_         306 GSMITFILKSG--------FEGAKKLLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVG---  374 (394)
T ss_dssp             CSEEEEEETTH--------HHHHHHHHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECC---
T ss_pred             CCeeeeeccCC--------HHHHHHHHHhCCccceeeccCCccceeECccccccccCCHHHHHhcCCCcCEEEEEec---
Confidence            45677776441        223445555542  111    0   1111110     0       0  1247999996   


Q ss_pred             CcHHHHHHHHHHHHHHHHHHhc
Q 010842          474 TDERHVVAAWELIMEGADRLFK  495 (499)
Q Consensus       474 ~t~~di~~l~~~l~~~~~~l~~  495 (499)
                        -||++.+++.|.+..+.+.+
T Consensus       375 --lEd~eDLi~Dl~qAl~~l~~  394 (394)
T d1e5ea_         375 --IEDADELIADFKQGLDALLR  394 (394)
T ss_dssp             --SSCHHHHHHHHHHHHHHHHC
T ss_pred             --cCCHHHHHHHHHHHHHHhhC
Confidence              36778888888888777654

>d2q7wa1 c.67.1.1 (A:1-396) Aspartate aminotransferase, AAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Escherichia coli [TaxId: 562]

Probab=99.61  E-value=1.2e-14  Score=144.56  Aligned_cols=323  Identities=14%  Similarity=0.062  Sum_probs=193.9

Q ss_pred             hHHHHHHHHHHHcc-cCCcccccChhhHHHHHHHHHHHHHHcCCC---CccccCCCccEEEcCChHHHHHHHHHHHHHHH
Q 010842          102 TAGFLGEMLCACFN-SVGFNWLASPASTELEIVVMDWLATMLKLP---KTFMFSGTGGGVIQNTTSDSILVTLIAARDRA  177 (499)
Q Consensus       102 ~~~~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~~~~~la~l~g~~---~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~  177 (499)
                      +++ +.+.+....+ +....|....+..++.+++.+|+.+..+..   ...      ..+.+.+++.+...++...... 
T Consensus        46 ~~~-V~~A~~~~~~~~~~~~Y~p~~G~~~lR~aia~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~l~~~-  117 (396)
T d2q7wa1          46 LTS-VKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRA------RTAQTPGGTGALRVAADFLAKN-  117 (396)
T ss_dssp             CHH-HHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCE------EEEEESHHHHHHHHHHHHHHHH-
T ss_pred             CHH-HHHHHHHHhhCCCCCCCCCCcCCHHHHHHHHHHHHhhcCCcccccce------eeeccchHHHHHHHHHHHHhhc-
Confidence            344 4444444433 334468888899999999999988776652   211      2345666655544433322111 


Q ss_pred             HhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCC
Q 010842          178 LDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTT  257 (499)
Q Consensus       178 ~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt  257 (499)
                              .++..|++++.++..+...++..|.   +++.+|...++++..+...+++.+...   ..+..+++.+.++|
T Consensus       118 --------~~gd~Vlvp~P~y~~y~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~P~N  183 (396)
T d2q7wa1         118 --------TSVKRVWVSNPSWPNHKSVFNSAGL---EVREYAYYDAENHTLDFDALINSLNEA---QAGDVVLFHGCCHN  183 (396)
T ss_dssp             --------SCCCEEEEEESCCTHHHHHHHHTTC---EEEEEECEETTTTEECHHHHHHHHTTC---CTTCEEEEECSSCT
T ss_pred             --------ccceEEEEecCCCccchHHHHHcCC---eeEecccccccccccccchHHHHHHHh---ccCcEEEEecCCcC
Confidence                    1677899999999999999999999   999999987666778888887765432   33456888889999


Q ss_pred             ccccc---CChhHHHHHHHHhCCEEEeeccccchhccCccchh---hhcCCCCCceeEecccccccCC-CcceEEEEeCc
Q 010842          258 STTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH---YLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQP  330 (499)
Q Consensus       258 ~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~---~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~  330 (499)
                      |||.+   +.+++|+++|++|+++++.|.+|.......+....   .......-..+..+.-|.++.| ..+|++.....
T Consensus       184 PTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~  263 (396)
T d2q7wa1         184 PTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAA  263 (396)
T ss_dssp             TTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCGGGCCEEEEEECS
T ss_pred             CcCeecCHHHHHHHHHHHhcCCeEEEEeccccccccCCccCchHhhhhhhhcccccccccccccccccCCCccccccchh
Confidence            99999   55778999999999999999999876542211111   1111112334555666766554 56888888764


Q ss_pred             hhH--HHhhcC---CccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--------cHHHHHHHHHHHHHHHH
Q 010842          331 GLL--VKALST---DPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--------GVLNLQSHIRSDIRLAK  397 (499)
Q Consensus       331 ~~l--~~~~~~---~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--------g~~g~~~~~~~~~~~a~  397 (499)
                      ..-  ......   .......                 ++   .....+++...+        ..+.++++.++..++++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~-----------------~~---~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  323 (396)
T d2q7wa1         264 DSETVDRAFSQMKAAIRANYS-----------------NP---PAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQ  323 (396)
T ss_dssp             SHHHHHHHHHHHHHHHHTTTS-----------------SC---CHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHHHHHHH
T ss_pred             HHHHHHHhhhhhhhhhhcccc-----------------CC---CHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHH
Confidence            211  000000   0000000                 00   122223322222        23456666677778888


Q ss_pred             HHHHHHhcCCC---eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCC
Q 010842          398 MFEGFVKSDPR---FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLT  474 (499)
Q Consensus       398 ~l~~~L~~~~~---~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~  474 (499)
                      .+.+.|+++..   |..+.++. +.++|  .+..           .+..++|.++..+++.++   +    |++++  ..
T Consensus       324 ~l~~~L~~~~~~~~~~~~~~~~-G~F~~--~~l~-----------~e~~~~L~~e~gV~~~~g---~----Ri~~a--~l  380 (396)
T d2q7wa1         324 LFVNTLQEKGANRDFSFIIKQN-GMFSF--SGLT-----------KEQVLRLREEFGVYAVAS---G----RVNVA--GM  380 (396)
T ss_dssp             HHHHHHHHTTCCSCCTHHHHCC-SSEEE--CCCC-----------HHHHHHHHHHHCEECCTT---C----EEEGG--GC
T ss_pred             HHHHHHHHhCCCCCcceecCCC-eEEEe--eCCC-----------HHHHHHHHHhCCEEECCC---C----EEEec--CC
Confidence            89999988621   22222333 33333  2221           223455544333444332   1    99985  25


Q ss_pred             cHHHHHHHHHHHHHH
Q 010842          475 DERHVVAAWELIMEG  489 (499)
Q Consensus       475 t~~di~~l~~~l~~~  489 (499)
                      ++++|++++++|.++
T Consensus       381 ~~~~i~~~~~ai~~v  395 (396)
T d2q7wa1         381 TPDNMAPLCEAIVAV  395 (396)
T ss_dssp             CTTTHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHh
Confidence            677899999999875

>d1ajsa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Pig (Sus scrofa), cytosolic form [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Pig (Sus scrofa), cytosolic form [TaxId: 9823]

Probab=99.60  E-value=7.2e-14  Score=139.55  Aligned_cols=372  Identities=13%  Similarity=0.037  Sum_probs=208.8

Q ss_pred             CHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHcc-cC-CcccccChhhHHHHHHHHHHHHHHcCCC
Q 010842           68 SFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFN-SV-GFNWLASPASTELEIVVMDWLATMLKLP  145 (499)
Q Consensus        68 ~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n-~~-~~~~~~~p~~~~lE~~~~~~la~l~g~~  145 (499)
                      ..-.+.+++++.-.++.++..-+-|..--...+.+|+ +.++.....+ .+ ...|....+..+|.+++.+|+.+..+.+
T Consensus        16 ~i~~l~~~~~~d~~~~~Inl~iG~~~d~~g~~~~~~~-V~~a~~~~~~~~~~~~~Y~p~~G~p~lreaia~~~~~~~~~~   94 (412)
T d1ajsa_          16 LVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPV-VRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPA   94 (412)
T ss_dssp             HHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHH-HHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHH
T ss_pred             hHHHHHHHHhcCCCCCcEEeeCCCCcCCCCCCCCcHH-HHHHHHHHHhCCCcCCCCCCCCCCHHHHHHHHHHHhccCCcc
Confidence            3445555565443344444433322221111223343 4444443332 22 3458888889999999999988766652


Q ss_pred             CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEe-eCCCCC
Q 010842          146 KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRAL-PTSVDA  224 (499)
Q Consensus       146 ~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v-~~~~~~  224 (499)
                      -..   .....+.|.+++.++..+..+.......    -..++..|+++++++..+...++..|.   .++.+ +..+++
T Consensus        95 ~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~pGd~Vlv~~P~y~~y~~~~~~~G~---~~v~~~~~~~~~  164 (412)
T d1ajsa_          95 LQE---KRVGGVQSLGGTGALRIGAEFLARWYNG----TNNKDTPVYVSSPTWENHNGVFTTAGF---KDIRSYRYWDTE  164 (412)
T ss_dssp             HHT---TCEEEEEEEHHHHHHHHHHHHHHHHSSS----SSCCCSCEEEEESCCTHHHHHHHHTTC---SCEEEEECEETT
T ss_pred             ccc---ccceeecccchhhHHHHHHHHHHHHhhh----cCCCCCEEEEeCCcchhhHHHHHHcCC---eEEEeecccccc
Confidence            110   0012456777777766665544321100    012677899999999999999999998   76554 444444


Q ss_pred             CCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCccchh----
Q 010842          225 NFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRH----  297 (499)
Q Consensus       225 ~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~----  297 (499)
                      .+..|.+.+++.+...   .....+++.+.++||||.+   +.+++|+++|++||++++.|.+|....+.......    
T Consensus       165 ~~~~d~~~~~~~~~~~---~~~~~~il~~~P~NPTG~v~s~e~~~~i~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~  241 (412)
T d1ajsa_         165 KRGLDLQGFLSDLENA---PEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIR  241 (412)
T ss_dssp             TTEECHHHHHHHHHHS---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHH
T ss_pred             cccccHHHHHHHHHhc---cCCcEEEEecCCCCCcCCCCCHHHHHHHHHHHhhCCEEEEecHhhhhhhcCCcccchhhhh
Confidence            5788999888776543   2334678888999999999   55899999999999999999999876543211110    


Q ss_pred             hhcCCCCCceeEecccccccCC-CcceEEEEeCchh--HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHH
Q 010842          298 YLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGL--LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLW  374 (499)
Q Consensus       298 ~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~--l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~  374 (499)
                      .......-..+..+.-|.++.| ..+|++.......  ..+..... ......             ...+.   ......
T Consensus       242 ~~~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~-~~~~~~-------------~~~~~---~~~~~~  304 (412)
T d1ajsa_         242 YFVSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQM-QKIVRV-------------TWSNP---PAQGAR  304 (412)
T ss_dssp             HHHHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHH-HHHHHT-------------TTSSC---CSHHHH
T ss_pred             hhhhhcccccccccccccccCCCCCccccccchhHHHHHHHHHHHH-HHHhhc-------------ccccc---chHHHH
Confidence            1111112334555555665554 5688888765421  11111000 000000             00001   112222


Q ss_pred             HHHHHh--------cHHHHHHHHHHHHHHHHHHHHHHhcCCC---eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHH
Q 010842          375 MVLRSY--------GVLNLQSHIRSDIRLAKMFEGFVKSDPR---FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLL  443 (499)
Q Consensus       375 ~~l~~~--------g~~g~~~~~~~~~~~a~~l~~~L~~~~~---~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~  443 (499)
                      +....+        ..+.++.+.++..++++.+.+.|++...   |..+ .++.+.++|  .+..           .+.+
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~l~~~L~~~~~~~~~~~i-~~~~G~F~~--~~ls-----------~~~v  370 (412)
T d1ajsa_         305 IVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALKTPGTWNHI-TDQIGMFSF--TGLN-----------PKQV  370 (412)
T ss_dssp             HHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCCHHH-HHCCSSEEE--CCCC-----------HHHH
T ss_pred             HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeeee-cCCCeEEEe--cCCC-----------HHHH
Confidence            222221        1234555666777778888888887632   2222 222233333  2221           2334


Q ss_pred             HHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          444 DWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       444 ~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ++|.++..+++.+.       .|++++.  +++++|++++++|.++.+++
T Consensus       371 ~~L~~e~gV~~vpg-------~Ri~~ag--~~~~~i~~~a~aI~~av~~~  411 (412)
T d1ajsa_         371 EYLINQKHIYLLPS-------GRINMCG--LTTKNLDYVATSIHEAVTKI  411 (412)
T ss_dssp             HHHHHTTCEECCTT-------SEEEGGG--CCTTTHHHHHHHHHHHHHHC
T ss_pred             HHHHHhCCEEEeCC-------CeEEecc--CCHHHHHHHHHHHHHHHHhc
Confidence            55554444555442       2999852  56788999999999998875

>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-synthase, CGS
species: Common tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=99.60  E-value=5.3e-14  Score=137.42  Aligned_cols=289  Identities=14%  Similarity=0.128  Sum_probs=191.8

Q ss_pred             ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842          120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS  199 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~  199 (499)
                      .-...|....||+.    ++++-|...         .+++++|..|+..++.+...           ++..|+++...+.
T Consensus        62 ~R~~nPt~~~LE~~----la~LEgg~~---------a~~~sSGMaAi~~~l~~l~~-----------~Gd~iv~~~~~Yg  117 (398)
T d1qgna_          62 GRYGNPTTVVLEEK----ISALEGAES---------TLLMASGMCASTVMLLALVP-----------AGGHIVTTTDCYR  117 (398)
T ss_dssp             GGGCCHHHHHHHHH----HHHHHTCSE---------EEEESCHHHHHHHHHHHHSC-----------SSCEEEEETTSCH
T ss_pred             cCCCChHHHHHHHH----HHHHhCCce---------EEEecCcchHHHHHHhhccc-----------ccccccccccccc
Confidence            33467888889998    888887654         38999998887777765432           5778888888887


Q ss_pred             hHHHHH----HHhCCCCCCeEEeeCCCCCCCccCHHHHHHH-HHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH
Q 010842          200 TFAKVC----KLAGVSPANIRALPTSVDANFSLSPQLLRRA-VEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE  274 (499)
Q Consensus       200 s~~ka~----~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~-i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~  274 (499)
                      .....+    ...|+   ++..++..       +.++.++. +.+++      .+|.+-.++||+..+-||++|+++||+
T Consensus       118 ~t~~l~~~~~~~~gi---~~~~~~~~-------~~~~~~~~~~~~~t------~~v~~EspsNP~l~v~Di~~ia~ia~~  181 (398)
T d1qgna_         118 KTRIFIETILPKMGI---TATVIDPA-------DVGALELALNQKKV------NLFFTESPTNPFLRCVDIELVSKLCHE  181 (398)
T ss_dssp             HHHHHHHHTGGGGTC---EEEEECSS-------CHHHHHHHHHHSCE------EEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred             hhhhhhccccccccc---cccccccc-------chhhhhhhhccccc------eEEEccCccccccccchHHHHHHHHhh
Confidence            655544    44577   77777532       44444443 33333      388999999999999999999999999


Q ss_pred             hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCC
Q 010842          275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESN  352 (499)
Q Consensus       275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~  352 (499)
                      +|+.++||..++.....-|    +-.   +||.+..|..|++++..+  .|+ ++.++......... ..          
T Consensus       182 ~g~~~vVDnT~atP~~~~P----l~~---GaDiVihS~TKy~~Ghsdv~~G~-v~~~~~~~~~~~~~-~~----------  242 (398)
T d1qgna_         182 KGALVCIDGTFATPLNQKA----LAL---GADLVLHSATKFLGGHNDVLAGC-ISGPLKLVSEIRNL-HH----------  242 (398)
T ss_dssp             TTCEEEEECTTTCTTTCCT----TTT---TCSEEEECTTTTTTCSSSCCCEE-EEECHHHHHHHHHH-HH----------
T ss_pred             cCCEEEecceeeccccCCc----hhh---CCCEEEEechhhcCcccceeehh-hcchhhhhhhhhhh-cc----------
Confidence            9999999999977654322    222   399999999999987644  444 44444433221110 00          


Q ss_pred             CcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-C-----C-----------
Q 010842          353 SVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-P-----R-----------  415 (499)
Q Consensus       353 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~-----~-----------  415 (499)
                                ..|-...+...|+.++-+  +.+..++++..++|..+.+.|+++|.++-+. |     |           
T Consensus       243 ----------~~G~~l~p~~a~ll~rgl--~TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~~~~~~~~~~g  310 (398)
T d1qgna_         243 ----------ILGGALNPNAAYLIIRGM--KTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTG  310 (398)
T ss_dssp             ----------HHCCCCCHHHHHHHHHHG--GGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSC
T ss_pred             ----------cCCCcCCHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHhCCCeeecCCCCCCCCcchhhhhhhcCC
Confidence                      011123456778777654  8899999999999999999999999987443 2     1           


Q ss_pred             CceEEEEEecCCCCCCcchhHHHHHHHHHHHH--hcCC-------EEEEee-----eE-------C--CEEEEEEeccCC
Q 010842          416 HFALVCFRLNPYPHSGSADTEMLNRKLLDWVN--STGR-------VYLTHT-----IV-------G--GLYMLRFAVGAS  472 (499)
Q Consensus       416 ~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~--~~g~-------~~~~~~-----~~-------~--g~~~lRi~~~~~  472 (499)
                      ..+.++|.....        .+...++++.|.  ..+.       .+..+.     .+       .  ....+|+|++  
T Consensus       311 ~g~~~sf~~~g~--------~~~a~~f~~~L~l~~~a~SlGg~~SLi~~p~~~th~~~~~~~~~~~Gi~~~liRlSvG--  380 (398)
T d1qgna_         311 FGGAVSFEVDGD--------LLTTAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG--  380 (398)
T ss_dssp             CCSEEEEEESSC--------HHHHHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC--
T ss_pred             CCceeeeeecCC--------HHHHHHHHHcCCcceeeeCCCCCcceeeCcchhccccCCHHHHHhcCCCcCEEEEEec--
Confidence            145778877542        233455666652  1111       111110     00       0  1357999996  


Q ss_pred             CCcHHHHHHHHHHHHHHHHH
Q 010842          473 LTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       473 ~~t~~di~~l~~~l~~~~~~  492 (499)
                         -||++.+++.|++..+.
T Consensus       381 ---lEd~eDLi~Dl~~AL~~  397 (398)
T d1qgna_         381 ---VEDFDDLKADILQALDS  397 (398)
T ss_dssp             ---SSCHHHHHHHHHHHHHH
T ss_pred             ---cCCHHHHHHHHHHHHhc
Confidence               35677777777777654

>d2ay1a_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Paracoccus denitrificans [TaxId: 266]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Paracoccus denitrificans [TaxId: 266]

Probab=99.60  E-value=1.3e-14  Score=144.19  Aligned_cols=365  Identities=12%  Similarity=0.048  Sum_probs=207.6

Q ss_pred             CCHHHHHHHHHhhhcCCCCCCCCccccccCCCCCChHHHHHHHHHHHccc-CCcccccChhhHHHHHHHHHHHHHHcCCC
Q 010842           67 ESFETILKDVQEKIIPGITHWLSPNFFAFFPATVSTAGFLGEMLCACFNS-VGFNWLASPASTELEIVVMDWLATMLKLP  145 (499)
Q Consensus        67 ~~~~~i~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~~~~~la~l~g~~  145 (499)
                      .+.-.+.+.+.+.-.++.++...+.|..--..++.+| .+.+.+....+. ....|....+..+|.+++.+++.+.-+..
T Consensus        11 d~i~~l~~~~~~d~~~~~InL~iG~~~d~~g~~~~~~-~V~~A~~~~~~~~~~~~Y~p~~G~~~lr~aia~~~~~~~~~~   89 (394)
T d2ay1a_          11 DKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMR-AVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGLKS   89 (394)
T ss_dssp             CSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCH-HHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGGGCCG
T ss_pred             ChHHHHHHHHhCCCCCCCEEccCCCccCCCCCCCCCH-HHHHHHHHHhhCCCCCCCCCCCCCHHHHHHHHHHHhcccccc
Confidence            3455666667654444444444444433222223334 455555554433 23468888899999999998887665543


Q ss_pred             CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCC
Q 010842          146 KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDAN  225 (499)
Q Consensus       146 ~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~  225 (499)
                      ..      ...+++.||+.+...++......         .++..|+++...+......++.+|.   +++.+|+..++.
T Consensus        90 ~~------~~~~~~~~~~~~~~l~~~~~~~~---------~~gd~V~~p~p~~~~y~~~~~~~g~---~~v~~~~~~~~~  151 (394)
T d2ay1a_          90 ET------TATLATVGGTGALRQALELARMA---------NPDLRVFVSDPTWPNHVSIMNFMGL---PVQTYRYFDAET  151 (394)
T ss_dssp             GG------EEEEEEEHHHHHHHHHHHHHHHH---------CTTCCEEEEESCCHHHHHHHHHHTC---CEEEEECEETTT
T ss_pred             cc------ccceeccCchHHHHHHHHHhhhc---------CCceEEEEecccccchHHHHHHcCC---EEEEecccchhc
Confidence            22      13466666665544444332211         1577899999999999999999999   999999876666


Q ss_pred             CccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHHHhCCEEEeeccccchhccCccchhhh--c
Q 010842          226 FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYL--N  300 (499)
Q Consensus       226 ~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~--~  300 (499)
                      +..+.+++++.....   .....+++.+.++||||.+   +.+++|+++|++|+++++.|.+|.......+......  .
T Consensus       152 ~~~~~~~~~~~~~~~---~~~~~i~~~~~p~NPTG~~~s~e~~~~l~~la~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~  228 (394)
T d2ay1a_         152 RGVDFEGMKADLAAA---KKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLI  228 (394)
T ss_dssp             TEECHHHHHHHHHTC---CTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHH
T ss_pred             ccccchhHHHHHhhc---ccCcEEEEeCCCCCCCCCCCCHHHHHHHHHHhhcceEEEEEeccchhhcccccccchhhhhh
Confidence            788888887766542   2234577778899999999   5578999999999999999999987754321111110  0


Q ss_pred             CCCCCc-eeEecccccccC-CCcceEEEEeCchhH--HHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHH
Q 010842          301 GIERVD-SFSFSPHKWLLS-YLDCCCLWVKQPGLL--VKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMV  376 (499)
Q Consensus       301 g~~~aD-si~~~~hK~l~~-p~~~g~l~~r~~~~l--~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~  376 (499)
                      ...... .+..+.-|.+.. ...+|++.......-  ....... .......             ..+...+.+..+...
T Consensus       229 ~~~~~~~~~~~s~sk~~~~~G~R~G~~~~~~~~~~~~~~~~~~~-~~~~~~~-------------~~~~~~~~~~~~~~~  294 (394)
T d2ay1a_         229 ASRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAM-AFLNRQT-------------YSFPPFHGAKIVSTV  294 (394)
T ss_dssp             HHHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHH-HHHHHTT-------------TSSCCCHHHHHHHHH
T ss_pred             hhhcccccccccccccccCCcccccchhhchhHHHHHHHhhhhh-Hhhhccc-------------ccchhHHHHHHHHHh
Confidence            001112 233344555544 366788777654221  0000000 0000000             000001111111111


Q ss_pred             -----HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC---eEEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHh
Q 010842          377 -----LRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR---FEIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNS  448 (499)
Q Consensus       377 -----l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~---~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~  448 (499)
                           +.....+.++.+.++..++++.+.+.|++..+   |..+ .|+.+.+++.  +..           .+.+++|.+
T Consensus       295 ~~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~-~~~~G~F~~~--~ls-----------~~~~~~L~~  360 (394)
T d2ay1a_         295 LTTPELRADWMAELEAVRSGMLRLREQLAGELRDLSGSDRFGFV-AEHRGMFSRL--GAT-----------PEQVKRIKE  360 (394)
T ss_dssp             HHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSTTTHH-HHCCSSEEEC--CCC-----------HHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceeeE-CCCceeEEec--CcC-----------HHHHHHHHH
Confidence                 11112344556666777778888888876421   2222 2344444442  221           223455554


Q ss_pred             cCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          449 TGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       449 ~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                      +..+++.+.       .|++++  ..++++|+++.++|.++.
T Consensus       361 ~~~V~~~~g-------~Ri~~a--~l~~~~i~~l~~ai~~v~  393 (394)
T d2ay1a_         361 EFGIYMVGD-------SRINIA--GLNDNTIPILARAIIEVG  393 (394)
T ss_dssp             HHCEECCTT-------CEEEGG--GCCTTTHHHHHHHHHHHT
T ss_pred             hCCEEecCC-------CEEEec--CCCHHHHHHHHHHHHHhC
Confidence            444555442       499985  356788999999998863

>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Methionine gamma-lyase, MGL
species: Trichomonas vaginalis, MGL2 [TaxId: 5722]

Probab=99.59  E-value=1.4e-14  Score=138.99  Aligned_cols=282  Identities=16%  Similarity=0.199  Sum_probs=189.2

Q ss_pred             HHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH----HHH
Q 010842          129 ELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF----AKV  204 (499)
Q Consensus       129 ~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~----~ka  204 (499)
                      .||+.    ++.+-|...         ++.+++|..|+..++.+..+           ++..|+++...+...    .+.
T Consensus         2 aLE~~----la~Leg~~~---------a~~~sSGMaAi~~~l~~ll~-----------~Gd~iv~~~~~Yg~t~~~~~~~   57 (331)
T d1pffa_           2 ALEGK----IAKLEHAEA---------CAATASGMGAIAASVWTFLK-----------AGDHLISDDCLYGCTHALFEHQ   57 (331)
T ss_dssp             HHHHH----HHHHHTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEESCCCHHHHHHHHTH
T ss_pred             HHHHH----HHHHhCCCe---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHHHHHHHH
Confidence            46666    888887654         48889998888777765532           566788888777553    344


Q ss_pred             HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHH-HHhCCEEEeec
Q 010842          205 CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVA-NEYGIWVHVDA  283 (499)
Q Consensus       205 ~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia-~~~~~~lhvD~  283 (499)
                      +.-+|+   ++.+++..       |++.++++++++++      +|.+..++||+..+.|++++++++ +++|+.++||.
T Consensus        58 l~~~gi---~~~~~d~~-------d~~~~~~~i~~~t~------~i~~Es~~np~~~v~d~~~~~~~~a~~~~~~~vVDn  121 (331)
T d1pffa_          58 LRKFGV---EVDFIDMA-------VPGNIEKHLKPNTR------IVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDN  121 (331)
T ss_dssp             HHHTTC---EEEEECTT-------STTHHHHTCCTTEE------EEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEEC
T ss_pred             HHhcCe---EEEEeccc-------chhhHhhhcccccc------eeeeecccccccccccchhhhhhhhcccCceEEeec
Confidence            567788   88888643       67788888876654      889999999999999999999985 67899999999


Q ss_pred             cccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcc
Q 010842          284 AYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQ  361 (499)
Q Consensus       284 A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~  361 (499)
                      .++.....-|    +-.   +||.+..|..|++++..+  .|.+..++.... +........+                 
T Consensus       122 T~atp~~~~p----l~~---GaDiVv~S~TKy~~Gh~d~~~G~v~~~~~~~~-~~~~~~~~~~-----------------  176 (331)
T d1pffa_         122 TFASPILTNP----LDL---GVDIVVHSATKYINGHTDVVAGLVCSRADIIA-KVKSQGIKDI-----------------  176 (331)
T ss_dssp             TTTHHHHCCG----GGG---TCSEEEEETTTTTSSSSSCCCEEEEECHHHHH-HHHHTCCCCC-----------------
T ss_pred             cccccccccc----ccc---CCCEEEecchhhcCCCCccccccccccccchh-hhhhhhhhhc-----------------
Confidence            9987654432    222   399999999999976533  566666544322 2111110000                 


Q ss_pred             cCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EEcC-----C-----------CceEEEEEe
Q 010842          362 VGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFE-IVVP-----R-----------HFALVCFRL  424 (499)
Q Consensus       362 ~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~-----~-----------~~~~v~f~~  424 (499)
                        .|....+...|..++  |.+.+..++++..++|..+.+.|+++|.++ +..|     |           ..++++|.+
T Consensus       177 --~G~~l~p~~a~ll~r--gl~Tl~~Rm~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~~~g~l~sf~l  252 (331)
T d1pffa_         177 --TGAIISPHDAWLITR--GTLTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDV  252 (331)
T ss_dssp             --CCCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEEC
T ss_pred             --cCCCCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhhhhCCcEEeeccccccCccHHHHHhhcccccCcccceee
Confidence              122234667788777  458899999999999999999999999985 3332     1           245677777


Q ss_pred             cCCCCCCcchhHHHHHHHHHHHHh--c----CC---EEEEeee-----E-------C--CEEEEEEeccCCCCcHHHHHH
Q 010842          425 NPYPHSGSADTEMLNRKLLDWVNS--T----GR---VYLTHTI-----V-------G--GLYMLRFAVGASLTDERHVVA  481 (499)
Q Consensus       425 ~~~~~~~~~~~~~~~~~l~~~l~~--~----g~---~~~~~~~-----~-------~--g~~~lRi~~~~~~~t~~di~~  481 (499)
                      ..         .+...++++.|.-  .    |.   .+..+..     +       .  ....+|++++ .    ||.+.
T Consensus       253 ~~---------~~~~~~f~d~l~lf~~~~SlG~~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlsvG-l----E~~~D  318 (331)
T d1pffa_         253 DG---------LEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVG-C----ENVQD  318 (331)
T ss_dssp             SS---------HHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECC-S----SCHHH
T ss_pred             cc---------HHHHHHHHHhCCcceecccCCCCceeEeCccccccccCCHHHHHhcCCCcCeEEEEee-e----CCHHH
Confidence            53         2334556665431  1    10   1111100     0       0  1256999996 2    56777


Q ss_pred             HHHHHHHHHHHH
Q 010842          482 AWELIMEGADRL  493 (499)
Q Consensus       482 l~~~l~~~~~~l  493 (499)
                      +++.|.+..+.+
T Consensus       319 Li~Dl~~AL~~i  330 (331)
T d1pffa_         319 IIDDLKQALDLV  330 (331)
T ss_dssp             HHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHh
Confidence            777777776543

>d2a7va1 c.67.1.4 (A:26-488) Serine hydroxymethyltransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=99.59  E-value=2.2e-13  Score=133.40  Aligned_cols=315  Identities=13%  Similarity=0.064  Sum_probs=189.3

Q ss_pred             cChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEc---CCCCch
Q 010842          123 ASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYG---SDQTHS  199 (499)
Q Consensus       123 ~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~---s~~~H~  199 (499)
                      ...-..++|.-+.+...++||++...|    +--+=..+|+.||+.+..+..+           ++..|+.   +...|.
T Consensus        67 G~~~iD~iE~la~~ra~~lF~~~~a~w----~vNVqp~SGs~An~av~~all~-----------pgD~Im~l~l~~GGHl  131 (463)
T d2a7va1          67 GAEVVDEIELLCQRRALEAFDLDPAQW----GVNVQPYSGSPANLAVYTALLQ-----------PHDRIMGLDLPDGGHL  131 (463)
T ss_dssp             ----CTHHHHHHHHHHHHHTTCCTTTE----EEECCCSSHHHHHHHHHHHHCC-----------SCEECCC---------
T ss_pred             CchhHHHHHHHHHHHHHHHhCCCchhc----cCCccccccHHHHHHHHHHHcC-----------CCceEEeeccCcCccc
Confidence            344578999999999999999986531    0025566899999877776543           5555553   334466


Q ss_pred             hHHHH-----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHH
Q 010842          200 TFAKV-----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANE  274 (499)
Q Consensus       200 s~~ka-----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~  274 (499)
                      |.-..     ....|..- +...++++++ ++.+|.+++++...+.+     |-+|++-.  +.+--.-|++++.+||++
T Consensus       132 shg~~~~~~~~~~~g~~~-~~~~Y~~d~~-~~~IDyd~~~~~a~~~k-----PklIi~G~--S~y~r~~d~~~~reIad~  202 (463)
T d2a7va1         132 THGYMSDVKRISATSIFF-ESMPYKLNPK-TGLIDYNQLALTARLFR-----PRLIIAGT--SAYARLIDYARMREVCDE  202 (463)
T ss_dssp             -----------------------CCBCTT-TCSBCHHHHHHHHHHHC-----CSEEEECC--SSCCSCCCHHHHHHHHHH
T ss_pred             ccccccccccccceeeEe-eeeeeeccCC-CCcCcHHHHHHHHhhcC-----CceEEecc--cccccccCHHHHHHHhhc
Confidence            54421     22233310 3444555543 36899999999987753     65655444  445556799999999999


Q ss_pred             hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchh-------------HHHhhcCCc
Q 010842          275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGL-------------LVKALSTDP  341 (499)
Q Consensus       275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~-------------l~~~~~~~~  341 (499)
                      .|.+|++|+||-.+.+....+...+   +.+|+++.+.||.|.+|. +|++++++...             +.+.+..  
T Consensus       203 vga~l~~D~aH~aGLIA~g~~~sP~---~~aDvvt~tTHKTlrGPr-gGiIl~~~~~~~~~~~~~~~~~~~~~~~i~~--  276 (463)
T d2a7va1         203 VKAHLLADMAHISGLVAAKVIPSPF---KHADIVTTTTHKTLRGAR-SGLIFYRKGVKAVDPKTGREIPYTFEDRINF--  276 (463)
T ss_dssp             TTCEEEEECGGGHHHHHTTSSCCGG---GTCSEEEEESSGGGCSCS-CEEEEEECSEEEEETTTEEEEECCCHHHHHH--
T ss_pred             ccceEEechhhhhHHhhhhhhcChh---hhhhhhhchhhhhhcCCC-ceEEEEcccccccccccCccchhHHHHHhhh--
Confidence            9999999999977765544443333   459999999999999995 67788776310             1010000  


Q ss_pred             cCCCCCCCCCCCcccCCCcccCCCCCCCc-HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CCCceE
Q 010842          342 EYLKNKPSESNSVVDFKDWQVGTGRRFKS-LRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PRHFAL  419 (499)
Q Consensus       342 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~~~  419 (499)
                      . ++.              +++++..... .+...+++......++++.++..++|+.|.+.|.+. |++++. ..+.++
T Consensus       277 a-vFP--------------g~qggph~h~iAa~Ava~~ea~~~~fk~Ya~qVv~NAk~La~~L~~~-G~~vv~ggTdnHl  340 (463)
T d2a7va1         277 A-VFP--------------SLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHL  340 (463)
T ss_dssp             H-HTT--------------TTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred             h-cCc--------------ccchhhhhhhHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCCCCce
Confidence            0 000              1233333322 233444544445678899999999999999999987 899985 456677


Q ss_pred             EEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-----CEEEEEEecc---CCCCcHHHHHHHHHHHHHHHH
Q 010842          420 VCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-----GLYMLRFAVG---ASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       420 v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-----g~~~lRi~~~---~~~~t~~di~~l~~~l~~~~~  491 (499)
                      +.+.+.+...        ..+...+.|.+.|+.+-.-+...     ....||+...   .....++|+.++.+.|.++..
T Consensus       341 vlvdl~~~~~--------~G~~ae~~Le~~gI~~Nkn~iP~D~~~~~~sGiRiGT~a~TtrG~~e~dm~~iA~~I~~~l~  412 (463)
T d2a7va1         341 VLVDLRPKGL--------DGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN  412 (463)
T ss_dssp             EEEECTTTTC--------CHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             eeeeccccCC--------CHHHHHHHHHhccCccCCccCCCCCCCCCCCceEeCCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence            7777755320        13344455556674332211111     1235999872   223467888888888877653

>d1rv3a_ c.67.1.4 (A:) Serine hydroxymethyltransferase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Serine hydroxymethyltransferase
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.58  E-value=1.2e-13  Score=135.81  Aligned_cols=343  Identities=14%  Similarity=0.098  Sum_probs=216.4

Q ss_pred             cccCCCCCChHHHHHHHHHHHc-ccCCc------ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHH
Q 010842           93 FAFFPATVSTAGFLGEMLCACF-NSVGF------NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDS  165 (499)
Q Consensus        93 ~~~~~~~~~~~~~~~~~l~~~~-n~~~~------~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A  165 (499)
                      +.-+++-......+-+.+.+.+ |.+.-      .|....-..++|..+.+...++||.+...+    .--+=..+|+.|
T Consensus        34 l~LIaSEN~~S~~v~~algS~l~nkYaeG~pg~Ryy~G~~~iD~iE~la~~ra~~lF~~~~~~~----~anVqp~SGs~A  109 (470)
T d1rv3a_          34 LELIASENFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCW----GVNVQPYSGSPA  109 (470)
T ss_dssp             EECCTTCCCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTE----EEECCCSSHHHH
T ss_pred             ceEecCCCcCCHHHHHHhcchhcccccCCCCCccccCCchhHHHHHHHHHHHHHHHhCCChhhc----cccccccCCccH
Confidence            4444444444444555555444 44332      244556788999999999999999974321    012456689999


Q ss_pred             HHHHHHHHHHHHHhHhhhhccCCeEEEc---CCCCchhHHH-------HHHHhCCCCCCeEEeeCCCCCCCccCHHHHHH
Q 010842          166 ILVTLIAARDRALDAVGAENMHKLVVYG---SDQTHSTFAK-------VCKLAGVSPANIRALPTSVDANFSLSPQLLRR  235 (499)
Q Consensus       166 ~~~al~~ar~~~~~~~~~~g~~~~~i~~---s~~~H~s~~k-------a~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~  235 (499)
                      |+.+..+..+           +++.|+.   +...|.+.-.       .......   +.+..+++++ ++.+|.+++++
T Consensus       110 n~av~~all~-----------pgD~im~~~l~~GGHlshg~~~~~~~~~~~~~~~---~~~~y~v~~~-~~~IDyd~l~~  174 (470)
T d1rv3a_         110 NFAVYTALVE-----------PHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFF---ESMAYKVNPD-TGYIDYDRLEE  174 (470)
T ss_dssp             HHHHHHHHTC-----------TTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHS---EEEEECBCTT-TCSBCHHHHHH
T ss_pred             HHHHHHHhcC-----------CCCeEeeeccccCCcccccccccCCCccccccee---EeeEEEEecc-cCcccHHHHHH
Confidence            9988776643           5555554   4445666431       1122234   6777888875 46999999999


Q ss_pred             HHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEeccccc
Q 010842          236 AVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKW  315 (499)
Q Consensus       236 ~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~  315 (499)
                      ...+.     +|.+|++-  .+.+--.-|++++.+||++.|.+|++|.||-.+.+....+...+   +.+|+++.+.||.
T Consensus       175 ~a~~~-----kPklIi~G--~S~y~r~~d~~~~reIad~vga~l~~D~aH~aGLIA~g~~~sPl---~~aDvvt~tTHKt  244 (470)
T d1rv3a_         175 NARLF-----HPKLIIAG--TSCYSRNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPF---EHCHVVTTTTHKT  244 (470)
T ss_dssp             HHHHH-----CCSEEEEC--CSSCCSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGG---GTCSEEEEESSGG
T ss_pred             HHHhh-----CcceEeec--hhhccccCCHHHHHHHHhccCCeEEecchhhhhhccccccCChh---heeeeeeeehhhh
Confidence            98764     36565543  34455667999999999999999999999976655443333333   3599999999999


Q ss_pred             ccCCCcceEEEEeCchh-------------HHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCc-HHHHHHHHHhc
Q 010842          316 LLSYLDCCCLWVKQPGL-------------LVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKS-LRLWMVLRSYG  381 (499)
Q Consensus       316 l~~p~~~g~l~~r~~~~-------------l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a-l~~~~~l~~~g  381 (499)
                      |.+|. +|++++++...             +.+.+...   ++              -+++++..... .++..+++...
T Consensus       245 lrGPr-gGiI~~~~~~~~~~~~~~~~~~~~~~~~i~~a---vF--------------Pg~qggph~~~IAa~Ava~~ea~  306 (470)
T d1rv3a_         245 LRGCR-AGMIFYRRGVRSVDPKTGKEILYNLESLINSA---VF--------------PGLQGGPHNHAIAGVAVALKQAM  306 (470)
T ss_dssp             GCCCS-CEEEEEECSBCC-------CCBCCHHHHHHHH---HT--------------TTTCCSCCHHHHHHHHHHHHHHT
T ss_pred             ccCCc-ceEEEEccccccccccccchhHHHHHHHHhhh---cC--------------ccccccchhhHHHHHHHHHHHhc
Confidence            99996 58888876410             11111000   00              01233333322 23344555544


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEc-CCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC
Q 010842          382 VLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVV-PRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG  460 (499)
Q Consensus       382 ~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~  460 (499)
                      ...++++.++..++|+.|.+.|.+. |++++. ..+.+++.+.+.+.+      ++  .++..+.|.+.|+.+-..+...
T Consensus       307 ~~~fk~Ya~qvv~NAk~La~~L~~~-G~~v~~ggTdnHlvlvdl~~~g------~~--g~~ae~~Le~~gI~~Nkn~iP~  377 (470)
T d1rv3a_         307 TPEFKEYQRQVVANCRALSAALVEL-GYKIVTGGSDNHLILVDLRSKG------TD--GGRAEKVLEACSIACNKNTCPG  377 (470)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEGGGGT------CC--HHHHHHHHHHTTEECEEECCSS
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCCceEEEeecccC------Cc--HHHHHHHHHHcCcEECCCcCCC
Confidence            5567999999999999999999987 899884 456677777665432      00  2334444555674332211111


Q ss_pred             -----CEEEEEEec---cCCCCcHHHHHHHHHHHHHHHH
Q 010842          461 -----GLYMLRFAV---GASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       461 -----g~~~lRi~~---~~~~~t~~di~~l~~~l~~~~~  491 (499)
                           ....+|+..   +.....++|+.++.+.|.++++
T Consensus       378 D~~~~~~sGiRiGT~alTtrG~~e~dm~~iA~~I~~~l~  416 (470)
T d1rv3a_         378 DKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIE  416 (470)
T ss_dssp             CSCTTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCeeEecCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence                 124599986   2344578999998888877664

>d1yaaa_ c.67.1.1 (A:) Aspartate aminotransferase, AAT {Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aspartate aminotransferase, AAT
species: Baker's yeast (Saccharomyces cerevisiae), cytosolic form [TaxId: 4932]

Probab=99.57  E-value=9e-14  Score=138.79  Aligned_cols=315  Identities=11%  Similarity=0.057  Sum_probs=189.0

Q ss_pred             cccccChhhHHHHHHHHHHHHHHcCCC--CccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCC
Q 010842          119 FNWLASPASTELEIVVMDWLATMLKLP--KTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQ  196 (499)
Q Consensus       119 ~~~~~~p~~~~lE~~~~~~la~l~g~~--~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~  196 (499)
                      ..|....+..++.+++.+++.+..+..  ...     -..+.+.|++.+...++.....         ..++..|++++.
T Consensus        67 ~~Y~p~~G~~~lr~aia~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---------~~~gd~Vlip~P  132 (412)
T d1yaaa_          67 HEYLGITGLPSLTSNAAKIIFGTQSDALQEDR-----VISVQSLSGTGALHISAKFFSK---------FFPDKLVYLSKP  132 (412)
T ss_dssp             CCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTC-----EEEEEEEHHHHHHHHHHHHHHH---------HCTTCCEEEEES
T ss_pred             CCCCCCCCCHHHHHHHHHHHhcccCccccccc-----eeEEecccchhHHHHHHHHHhc---------cCCCCEEecccc
Confidence            468888899999999888887766542  111     0112223333333333222111         115778999999


Q ss_pred             CchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCccccc---CChhHHHHHHH
Q 010842          197 THSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAV---DNVEPLAEVAN  273 (499)
Q Consensus       197 ~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~i---d~l~~I~~ia~  273 (499)
                      .+......+...|.   .++.+|+..++++..|.+.++..+...+   ....+++.+.++||||.+   +.+++|+++|+
T Consensus       133 ~~~~y~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~i~~P~NPTG~~~s~~~~~~i~~~a~  206 (412)
T d1yaaa_         133 TWANHMAIFENQGL---KTATYPYWANETKSLDLNGFLNAIQKAP---EGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIA  206 (412)
T ss_dssp             CCTTHHHHHHTTTC---CEEEEECEETTTTEECHHHHHHHHHHSC---TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHH
T ss_pred             cCchhHHHHHHcCC---ceecccccccccccccchhhhcccccCC---CceEEEEecCCCCCccccCCHHHHHHHHhhhc
Confidence            99999999999999   9999998776778999999988876533   345688999999999999   45889999999


Q ss_pred             HhCCEEEeeccccchhccCccchh-----hhc--CCCCCceeEecccccccCC-CcceEEEEeCchh-----HHHhhcCC
Q 010842          274 EYGIWVHVDAAYAGSACICPEFRH-----YLN--GIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGL-----LVKALSTD  340 (499)
Q Consensus       274 ~~~~~lhvD~A~g~~~~~~~~~~~-----~~~--g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~-----l~~~~~~~  340 (499)
                      +++++++.|.+|..+.........     ...  ....--++..+..|.++.| .-+|++++..+..     ....+...
T Consensus       207 ~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~  286 (412)
T d1yaaa_         207 SKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQ  286 (412)
T ss_dssp             HTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHH
T ss_pred             cCCEEEeecceeeecccCCcccchhhhhhhhhccccCCCeEEEEecCCccccCcCceEEEEEchhhhhhHHHHHHHHHHH
Confidence            999999999999876543211110     011  1111225667888877654 6689988865421     11111000


Q ss_pred             ccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHHHh--------cHHHHHHHHHHHHHHHHHHHHHHhcCCC---e
Q 010842          341 PEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLRSY--------GVLNLQSHIRSDIRLAKMFEGFVKSDPR---F  409 (499)
Q Consensus       341 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--------g~~g~~~~~~~~~~~a~~l~~~L~~~~~---~  409 (499)
                      .......             +..+.   ..+........+        ..+.++.+.++..++++.+.+.|++...   |
T Consensus       287 ~~~~~~~-------------~~~~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~  350 (412)
T d1yaaa_         287 LAKIIRS-------------EVSNP---PAYGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNW  350 (412)
T ss_dssp             HHHHHHT-------------TTSSC---CHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCC
T ss_pred             HHHHHHH-------------HhcCC---ChHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence            0000000             00000   122223332222        1234566666777788888888877521   2


Q ss_pred             EEEcCCCceEEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHH
Q 010842          410 EIVVPRHFALVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEG  489 (499)
Q Consensus       410 ~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~  489 (499)
                      ..+ +|+.+.++|  .+..       .    +++++|.++..+++.+.       .|++++.  ++++.|+.+.++|.++
T Consensus       351 ~~~-~~~gG~F~~--~~ls-------~----e~~~~L~~e~~V~~~~g-------~Ris~~g--~~~~~i~~l~~ai~~v  407 (412)
T d1yaaa_         351 DHI-VNQCGMFSF--TGLT-------P----QMVKRLEETHAVYLVAS-------GRASIAG--LNQGNVEYVAKAIDEV  407 (412)
T ss_dssp             THH-HHCCSSEEE--CCCC-------H----HHHHHHHHHHCEECCTT-------SEEEGGG--CCTTTHHHHHHHHHHH
T ss_pred             cee-CCCceEEEe--cCcC-------H----HHHHHHHHhCCEEECCC-------CEEEecc--CCHHHHHHHHHHHHHH
Confidence            222 233344443  2221       1    23444433333454442       3998853  5667899999999998


Q ss_pred             HHH
Q 010842          490 ADR  492 (499)
Q Consensus       490 ~~~  492 (499)
                      .+.
T Consensus       408 ~k~  410 (412)
T d1yaaa_         408 VRF  410 (412)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            764

>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: O-acetyl-L-homoserine sulfhydrylase
species: Thermus thermophilus [TaxId: 274]

Probab=99.57  E-value=3.1e-13  Score=132.69  Aligned_cols=246  Identities=14%  Similarity=0.139  Sum_probs=160.6

Q ss_pred             ccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCch
Q 010842          120 NWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHS  199 (499)
Q Consensus       120 ~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~  199 (499)
                      .-...|-...+|+.    ++++-|...         ++.+++|..|+..++.+...           ++..|+++...+.
T Consensus        53 sR~~nPT~~~LE~~----la~LE~~~~---------a~~~~SGmaAi~~~~~~l~~-----------~gd~il~~~~~Yg  108 (421)
T d2ctza1          53 SRIMNPTVDVLEKR----LAALEGGKA---------ALATASGHAAQFLALTTLAQ-----------AGDNIVSTPNLYG  108 (421)
T ss_dssp             BTTBCHHHHHHHHH----HHHHHTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEECSCCCH
T ss_pred             cCCCCHHHHHHHHH----HHHHhCCCe---------EEEecChHHHHHHHHHhhcc-----------cccceeecCCcCC
Confidence            33466888889988    888887654         48888998776666655432           5778999988886


Q ss_pred             hHHHH----HHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh
Q 010842          200 TFAKV----CKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY  275 (499)
Q Consensus       200 s~~ka----~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~  275 (499)
                      ...+.    +...|+   .+.+++.+      -+.+..++.++++++      +|.+-.++||+..+-||++|+++||++
T Consensus       109 ~t~~l~~~~~~~~gi---~~~~~d~~------~~~~~~~~~~~~~t~------li~~EtpsNP~l~v~Di~~i~~iA~~~  173 (421)
T d2ctza1         109 GTFNQFKVTLKRLGI---EVRFTSRE------ERPEEFLALTDEKTR------AWWVESIGNPALNIPDLEALAQAAREK  173 (421)
T ss_dssp             HHHHHHHTHHHHTTC---EEEECCTT------CCHHHHHHHCCTTEE------EEEEESSCTTTCCCCCHHHHHHHHHHH
T ss_pred             chhHHHHHHHhhccc---cceecccc------cCcchhccccCCCce------EEEEcCCCcceeEecchHHHHHHHHhc
Confidence            65444    456788   77776532      144555666665554      899999999999999999999999999


Q ss_pred             CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHH-----hhcCCccCCCCCC
Q 010842          276 GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVK-----ALSTDPEYLKNKP  348 (499)
Q Consensus       276 ~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~-----~~~~~~~yl~~~~  348 (499)
                      |+.++||..++...+.+   +++..   +||.+..|..|++++..+  +|++..++......     .....+.|-....
T Consensus       174 g~~~vvDnT~a~tP~~~---~Pl~~---GaDiVvhS~TKyl~GHsD~l~G~vv~~~~~~~~~~r~~~~~~~~~~~~~~~~  247 (421)
T d2ctza1         174 GVALIVDNTFGMGGYLL---RPLAW---GAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRL  247 (421)
T ss_dssp             TCEEEEECGGGGGGTSC---CGGGG---TCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCH
T ss_pred             CCceEecccccccceec---ccccc---CCcEEEEechhhccCCCCeEEEEEEcCCcchhhhcccccccCCchhhhhhHH
Confidence            99999999997432222   22223   399999999999987644  67776655321100     0000111100000


Q ss_pred             CCCCCcccCC-----CcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Q 010842          349 SESNSVVDFK-----DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIV  412 (499)
Q Consensus       349 ~~~~~~~~~~-----~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~  412 (499)
                      .+......+.     ...-..|-...+...|+.++-  .+.+..++++..++|..+.+.|+++|.++-+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~G~~~sP~~a~l~~rg--l~TL~lRm~~~~~nA~~vA~~L~~hp~V~~V  314 (421)
T d2ctza1         248 TEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLG--METLSLRAERHVENTLHLAHWLLEQPQVAWV  314 (421)
T ss_dssp             HHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHHTCTTEEEE
T ss_pred             HHHhccHHHHHHHHHHHHHhccCCCCHHHHHHHhcC--CcchhhHHHHHHHHHHHHHhhhccCCCeeEE
Confidence            0000000000     000001223345677777665  4889999999999999999999999998544

>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine beta-lyase, CBL
species: Escherichia coli [TaxId: 562]

Probab=99.54  E-value=4e-13  Score=131.22  Aligned_cols=290  Identities=12%  Similarity=0.115  Sum_probs=195.8

Q ss_pred             ccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhH
Q 010842          122 LASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTF  201 (499)
Q Consensus       122 ~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~  201 (499)
                      ...|-...+|+.    ++++-|...         ++.+++|..|+..++.+...           ++..|+++...|...
T Consensus        55 ~~nPt~~~le~~----la~LEg~~~---------a~~~~SGMaAi~~~l~~l~~-----------~Gd~iv~~~~~Yg~T  110 (391)
T d1cl1a_          55 RGTLTHFSLQQA----MCELEGGAG---------CVLFPCGAAAVANSILAFIE-----------QGDHVLMTNTAYEPS  110 (391)
T ss_dssp             TCCHHHHHHHHH----HHHHHTCSE---------EEEESSHHHHHHHHHHHHCC-----------TTCEEEEETTSCHHH
T ss_pred             CCChhHHHHHHH----HHHHhCCcc---------EEEeccccceeeehhhcccC-----------CCCeEEEecccccch
Confidence            456888888888    888887654         48899998888777766532           567889998888776


Q ss_pred             HHHHH----HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHh--
Q 010842          202 AKVCK----LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEY--  275 (499)
Q Consensus       202 ~ka~~----~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~--  275 (499)
                      .+.++    -.|+   ++..++.       .|.++++++++++++      +|.+-.++||+..+-||++|+++|+++  
T Consensus       111 ~~l~~~~l~~~Gi---~~~~~d~-------~d~~~~~~~i~~~t~------~i~~EtpsNP~l~v~Di~~i~~~a~~~~~  174 (391)
T d1cl1a_         111 QDFCSKILSKLGV---TTSWFDP-------LIGADIVKHLQPNTK------IVFLESPGSITMEVHDVPAIVAAVRSVVP  174 (391)
T ss_dssp             HHHHHHTGGGGTC---EEEEECT-------TCGGGGGGTCCTTEE------EEEEESSCTTTCCCCCHHHHHHHHHHHCT
T ss_pred             hhhhhhccccccc---ccccccC-------ccccccccccccccc------eeeecccCcccccccccHHHHHHHHhccC
Confidence            65554    4566   7777653       256778888776654      899999999999999999999999875  


Q ss_pred             CCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCCCCC
Q 010842          276 GIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSESNS  353 (499)
Q Consensus       276 ~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~  353 (499)
                      |+.++||..++.....-|    +-.   +||.+..|..|++++..+  .|++..+. ....+..... ..          
T Consensus       175 g~~~vVDnT~atP~~~~P----l~~---GaDivvhS~TKy~~GhsdvlgG~vv~~~-~~~~~~~~~~-~~----------  235 (391)
T d1cl1a_         175 DAIIMIDNTWAAGVLFKA----LDF---GIDVSIQAATKYLVGHSDAMIGTAVCNA-RCWEQLRENA-YL----------  235 (391)
T ss_dssp             TCEEEEECTTTTTTSSCG----GGG---TCSEEEEETTTTTTCSSSCCCEEEEECT-TTHHHHHHHH-HH----------
T ss_pred             CcEEEEeccccchhhhcc----ccc---ccceEEeecchhccccccccccceeccc-cccccchhhh-hc----------
Confidence            999999999987654322    222   399999999999987644  55555443 3222211110 00          


Q ss_pred             cccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCC-----------------C
Q 010842          354 VVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPR-----------------H  416 (499)
Q Consensus       354 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~-----------------~  416 (499)
                                .+-...+...|..++  |.+.+..++++..++|..+.+.|+++|.++-+.-|                 .
T Consensus       236 ----------~G~~~~p~~a~ll~r--gl~TL~lR~~~~~~nA~~vA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~  303 (391)
T d1cl1a_         236 ----------MGQMVDADTAYITSR--GLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGS  303 (391)
T ss_dssp             ----------TTCCCCHHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCC
T ss_pred             ----------ccccCCchhhhhhhc--cchhHHHHHHHHHHHHHHHHHHHHhcccccccccccccchhhHHHHhhccCCC
Confidence                      111224566777766  45889999999999999999999999998765322                 1


Q ss_pred             ceEEEEEecCCCCCCcchhHHHHHHHHHHHH--hcCC-------EEEEeee-----E--C-----CEEEEEEeccCCCCc
Q 010842          417 FALVCFRLNPYPHSGSADTEMLNRKLLDWVN--STGR-------VYLTHTI-----V--G-----GLYMLRFAVGASLTD  475 (499)
Q Consensus       417 ~~~v~f~~~~~~~~~~~~~~~~~~~l~~~l~--~~g~-------~~~~~~~-----~--~-----g~~~lRi~~~~~~~t  475 (499)
                      .+.++|.+....      ..+...++++.|.  ..+.       .++.+..     .  .     ....+|+|++     
T Consensus       304 gg~~sf~l~~~~------~~e~~~~f~d~L~l~~~a~SlG~~~SLi~~~~~~~~~~~~~~~~~gi~~~liRlSVG-----  372 (391)
T d1cl1a_         304 SGLFSFVLKKKL------NNEELANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIG-----  372 (391)
T ss_dssp             CSEEEEEESSCC------CHHHHHHHHTTCSSCBCCSCCCSSSCEEEEECHHHHHHTSTTCCCCCCSCEEEEECC-----
T ss_pred             CcceeeeecCCC------CHHHHHHHHHcCCcceEeeCCCCCccceeCCcccccccCCchHhcCCCcCEEEEEec-----
Confidence            346788776532      0122334444432  1111       1111110     0  0     1256999997     


Q ss_pred             HHHHHHHHHHHHHHHHHH
Q 010842          476 ERHVVAAWELIMEGADRL  493 (499)
Q Consensus       476 ~~di~~l~~~l~~~~~~l  493 (499)
                      -||++.+++.|++..+++
T Consensus       373 lEd~eDLi~Dl~~AL~~i  390 (391)
T d1cl1a_         373 LEDVDDLIADLDAGFARI  390 (391)
T ss_dssp             SSCHHHHHHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHHHHhh
Confidence            367888888888877765

>d3tata_ c.67.1.1 (A:) Aromatic aminoacid aminotransferase, AroAT {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Aromatic aminoacid aminotransferase, AroAT
species: Escherichia coli [TaxId: 562]

Probab=99.52  E-value=4.5e-14  Score=140.31  Aligned_cols=209  Identities=15%  Similarity=-0.012  Sum_probs=139.5

Q ss_pred             HHHHHHHHHHcc--cCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          104 GFLGEMLCACFN--SVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       104 ~~~~~~l~~~~n--~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      ..+.+......+  .....|....+..+|.+++.+|+.+..|.+...     ...+.+.+++.+...++........   
T Consensus        47 ~~V~~A~~~l~~~~~~~~~Y~p~~G~~~lR~aia~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~l~~~~~~~~---  118 (397)
T d3tata_          47 QAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQ-----QRVATIQTLGGSGALKVGADFLKRY---  118 (397)
T ss_dssp             HHHHHHHHHHTTSCCSSBCCCCTTCCHHHHHHHHHHHTCSSCHHHHT-----TCEEECCBSHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHhCcccCCCCCCcccCHHHHHHHHHHHhhccCCcCCc-----CcEEEecCchhHHHHHHHHHHhhhc---
Confidence            344555444332  223468888899999999888887766653110     1234455544443333333322221   


Q ss_pred             hhhccCCeEEEcCCCCchhHHHHHHHhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccc
Q 010842          182 GAENMHKLVVYGSDQTHSTFAKVCKLAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTA  261 (499)
Q Consensus       182 ~~~g~~~~~i~~s~~~H~s~~ka~~~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~  261 (499)
                          .++..|+++++++..+..+++.+|.   +++.+|++.++.+..|.+++.+.+...   ..++.+++.+.++||||.
T Consensus       119 ----~pgd~Vlv~~P~y~~y~~~~~~~G~---~~~~v~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~NPTG~  188 (397)
T d3tata_         119 ----FPESGVWVSDPTWENHVAIFAGAGF---EVSTYPWYDEATNGVRFNDLLATLKTL---PARSIVLLHPCCHNPTGA  188 (397)
T ss_dssp             ----CSSCCCEECSSCCTTHHHHHHTTTC---CCEECCCCCTTTSSCCHHHHHHHHTTC---CSSCCCEECSSSCSSSCC
T ss_pred             ----CCCCcceecccCccccHHHHHHcCC---EEEEEecchhhccccchHHHHHHhhhc---ccccEEEEecCCCCCCCe
Confidence                1677899999999999999999999   999999988777888988888776532   234457788889999999


Q ss_pred             c---CChhHHHHHHHHhCCEEEeeccccchhccCccchhh---hcCCCCCceeEecccccccCC-CcceEEEEeCc
Q 010842          262 V---DNVEPLAEVANEYGIWVHVDAAYAGSACICPEFRHY---LNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQP  330 (499)
Q Consensus       262 i---d~l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~---~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~  330 (499)
                      +   +.+++|+++|++|+++++.|.+|....+..+.....   ......--.+..+..|.++.| .-+|++.....
T Consensus       189 ~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~  264 (397)
T d3tata_         189 DLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMCE  264 (397)
T ss_dssp             CCCHHHHHHHHHHHHHTTCCCEECBSCTTSSSCHHHHHHHHHHHHTTTCCCEECBCCHHHHTBTTTCCBCCEEECS
T ss_pred             eCCHHHHHHHHHHHhhcCeeEEeehhhhhhccCCcccchhhhhhhhcCCceEEEecCcccccccCccccccccchh
Confidence            9   557889999999999999999998764422111111   111111124556678877665 55788776654

>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: Cystathionine synthase-like
domain: Cystathionine gamma-lyase (CYS3)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.46  E-value=1.9e-12  Score=126.25  Aligned_cols=220  Identities=15%  Similarity=0.162  Sum_probs=153.1

Q ss_pred             cccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchh
Q 010842          121 WLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHST  200 (499)
Q Consensus       121 ~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s  200 (499)
                      -...|-...+|+.    ++++-|...         ++++++|..|+ .++.....           ++..|+++...+..
T Consensus        51 R~gnPT~~~lE~~----la~LE~~~~---------a~~~sSGmaAi-~~~l~~l~-----------~gd~iv~~~~~yg~  105 (393)
T d1n8pa_          51 RSQNPNRENLERA----VAALENAQY---------GLAFSSGSATT-ATILQSLP-----------QGSHAVSIGDVYGG  105 (393)
T ss_dssp             TTCCHHHHHHHHH----HHHHTTCSE---------EEEESCHHHHH-HHHHHTSC-----------SSCEEEEESSCCHH
T ss_pred             CCCChHHHHHHHH----HHHHhCCce---------EEEecCchhHH-Hhhhhccc-----------CCCeeeeeeeeccc
Confidence            3456888889988    888887654         48888886554 34433321           45567777777776


Q ss_pred             HHHHHH----HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHH---
Q 010842          201 FAKVCK----LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVAN---  273 (499)
Q Consensus       201 ~~ka~~----~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~---  273 (499)
                      ....+.    ..|+   ++.+++.        +.++++++++++++      +|.+-.++||+..+-||++|+++||   
T Consensus       106 t~~~~~~~l~~~gi---~~~~~~~--------~~~~~~~~i~~~t~------lv~~EspsNP~l~v~Di~~ia~~a~~~~  168 (393)
T d1n8pa_         106 THRYFTKVANAHGV---ETSFTND--------LLNDLPQLIKENTK------LVWIETPTNPTLKVTDIQKVADLIKKHA  168 (393)
T ss_dssp             HHHHHHHTSTTTCS---CCEEESS--------HHHHHHHHSCSSEE------EEEECSSCTTTCCCCCHHHHHHHHHHHT
T ss_pred             chhhhhhhhhcccc---eeEEeec--------chHHHHHHhhhhcc------eeEecCcchhhhhccchhhhhhhhhhhc
Confidence            555544    3455   6666541        45678888876654      8999999999999999999999999   


Q ss_pred             -HhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCc--ceEEEEeCchhHHHhhcCCccCCCCCCCC
Q 010842          274 -EYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLD--CCCLWVKQPGLLVKALSTDPEYLKNKPSE  350 (499)
Q Consensus       274 -~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~r~~~~l~~~~~~~~~yl~~~~~~  350 (499)
                       ++|+.++||..++.....-|    +..   +||.+..|..|++++..+  +|++..+++... ..+......       
T Consensus       169 ~~~g~~lvVDnT~atP~~~~P----l~~---GADiVvhS~TKyi~GhsDv~~G~v~~~~~~~~-~~l~~~~~~-------  233 (393)
T d1n8pa_         169 AGQDVILVVDNTFLSPYISNP----LNF---GADIVVHSATKYINGHSDVVLGVLATNNKPLY-ERLQFLQNA-------  233 (393)
T ss_dssp             TTTTCEEEEECTTTHHHHCCG----GGG---TCSEEEEETTTTTTCSSCCCCEEEEESCHHHH-HHHHHHHHH-------
T ss_pred             ccCCceEEEecCccCcccCCc----hhh---CCCEEEEccccccCCCCccccceeeecchhHH-HHHHHHHhh-------
Confidence             67899999999987754332    222   399999999999987644  566666654432 111110000       


Q ss_pred             CCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEE
Q 010842          351 SNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD-PRFEIV  412 (499)
Q Consensus       351 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~-~~~~~~  412 (499)
                                   .|-.......|..++-  .+.+..++++..++|..+.+.|++. |.++-+
T Consensus       234 -------------~G~~~~p~~a~ll~rg--l~Tl~lR~~~~~~nA~~lA~~L~~~~~~V~~V  281 (393)
T d1n8pa_         234 -------------IGAIPSPFDAWLTHRG--LKTLHLRVRQAALSANKIAEFLAADKENVVAV  281 (393)
T ss_dssp             -------------HCCCCCHHHHHHHHHH--HTTHHHHHHHHHHHHHHHHHHHTSCTTTEEEE
T ss_pred             -------------cCCCCChHHHHHHHhC--CcchhhHHHHHHHHHHHHHHHHHhccCcEEEE
Confidence                         1112235667777764  4889999999999999999999875 667654

>d2byla1 c.67.1.4 (A:36-439) Ornithine aminotransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=4.9e-11  Score=117.84  Aligned_cols=297  Identities=12%  Similarity=0.081  Sum_probs=171.3

Q ss_pred             HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHh-----
Q 010842          134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLA-----  208 (499)
Q Consensus       134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~-----  208 (499)
                      +.+.++++.+...         ..++++||+|+..|+..||............+...+......|.....+....     
T Consensus        88 ~~~~~~~~~~~~~---------v~~~~sGseA~e~Aik~ar~~~~~~~~~~~~~~~i~~~~~~~hg~t~~~~~~~~~~~~  158 (404)
T d2byla1          88 YEEYITKLFNYHK---------VLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTS  158 (404)
T ss_dssp             HHHHHHHHHTCSE---------EEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCCSHHHHTTCCCHHH
T ss_pred             HHHhhhhcccccc---------cccccCccccchhHHHHHHHHhhhccccccccccccccCCCccccccceeccCCCccc
Confidence            3345777877654         38899999999999999987543321111112334444555565443333221     


Q ss_pred             --CCC--CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEE
Q 010842          209 --GVS--PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVH  280 (499)
Q Consensus       209 --G~g--~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lh  280 (499)
                        +++  ...+..+|.+       |+++|++.+.+.     ...+|++--.....|.+-|    +++|.++|++||+.++
T Consensus       159 ~~~~~p~~~~~~~~p~~-------d~~~l~~~l~~~-----~iAaviiEPi~g~~G~~~~~~~~l~~l~~lc~~~g~llI  226 (404)
T d2byla1         159 YDGFGPFMPGFDIIPYN-------DLPALERALQDP-----NVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFI  226 (404)
T ss_dssp             HTTSCSCCTTEEEECTT-------CHHHHHHHHTST-----TEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEE
T ss_pred             ccCCCCCCCCeeEeccc-------CHHHHHHhcCCC-----CeEEEEECCccCCCCCccCCHHHHHHHHHHHHhcCeEEE
Confidence              221  1244555532       788999888532     2334444333444566644    8999999999999999


Q ss_pred             eeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCC
Q 010842          281 VDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKD  359 (499)
Q Consensus       281 vD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~  359 (499)
                      +|+++.|+.....-+.....|+. .|.+++.  |.++.. +..|.+++++.  +.+.+.  +....              
T Consensus       227 ~DEV~tGfgR~G~~~a~~~~gv~-PDi~~~g--K~l~gG~~p~~av~~~~~--i~~~~~--~~~~~--------------  285 (404)
T d2byla1         227 ADEIQTGLARTGRWLAVDYENVR-PDIVLLG--KALSGGLYPVSAVLCDDD--IMLTIK--PGEHF--------------  285 (404)
T ss_dssp             EECTTTTTTTTSSSSGGGGGTCC-CSEEEEC--GGGGTTSSCCEEEEECHH--HHTTSC--TTSSC--------------
T ss_pred             eeccccccccccccchhhhcCCC-CCEEEEC--chhhCCCccceeeeechh--hhhccC--CCCCC--------------
Confidence            99999776444433333345554 6988764  777654 46788887753  212221  11100              


Q ss_pred             cccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcC--CCceEEEEEecCCCCCCcch
Q 010842          360 WQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVP--RHFALVCFRLNPYPHSGSAD  434 (499)
Q Consensus       360 ~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~--~~~~~v~f~~~~~~~~~~~~  434 (499)
                          .+-....+.+.+   +|..+-.+   +..++..++.+++.+.|+++.. +.+.+  -...+..+.+....   .  
T Consensus       286 ----~T~~gnpl~~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~l~~l~~-~~i~~vRg~Gl~~~i~~~~~~---~--  352 (404)
T d2byla1         286 ----STYGGNPLGCRVAIAALEVLEEE---NLAENADKLGIILRNELMKLPS-DVVTAVRGKGLLNAIVIKETK---D--  352 (404)
T ss_dssp             ----CSSTTCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHTSCT-TTEEEEEEETTEEEEEECCCS---S--
T ss_pred             ----cCCCcCHHHHHHHHHHHHHHHhc---CchhhhhHhhHHHHHHHHhhcc-ccceeeeecccEEEEEEecCC---c--
Confidence                111123444444   44444333   3556667778888888887532 11111  11123344443321   0  


Q ss_pred             hHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          435 TEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       435 ~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                        ....++.+++.++|..+. +.  .+ ..+|++.. ...|++|||+++++|++.+.+
T Consensus       353 --~~~~~~~~~l~~~Gvl~~-~~--~~-~~i~l~Pp-L~it~~~id~~~~~l~~al~~  403 (404)
T d2byla1         353 --WDAWKVCLRLRDNGLLAK-PT--HG-DIIRFAPP-LVIKEDELRESIEIINKTILS  403 (404)
T ss_dssp             --CCHHHHHHHHHHTTEECE-EE--ET-TEEEECCC-TTCCHHHHHHHHHHHHHHHHT
T ss_pred             --hhHHHHHHHHHhCCeEEe-cC--CC-CEEEEECC-cCCCHHHHHHHHHHHHHHHHc
Confidence              113457778888895432 21  12 35898863 557999999999999998753

>d1vefa1 c.67.1.4 (A:9-395) Acetylornithine/acetyl-lysine aminotransferase ArgD {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Acetylornithine/acetyl-lysine aminotransferase ArgD
species: Thermus thermophilus [TaxId: 274]

Probab=99.43  E-value=2.4e-11  Score=119.39  Aligned_cols=294  Identities=13%  Similarity=0.046  Sum_probs=170.4

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      ++.+.++.+.+.+.......       -..++++||+|+..|+..||....        ++.+|.....-|-...-+...
T Consensus        78 ~~~~~~la~~l~~~~~~~~~-------~v~f~~sGseA~e~Aik~Ar~~t~--------r~~ii~~~~~yHG~t~~~~~~  142 (387)
T d1vefa1          78 TPMRGEFYRTLTAILPPELN-------RVFPVNSGTEANEAALKFARAHTG--------RKKFVAAMRGFSGRTMGSLSV  142 (387)
T ss_dssp             CHHHHHHHHHHHHTSCTTEE-------EEEEESSHHHHHHHHHHHHHHHHS--------CCEEEEETTCCCCSSHHHHHT
T ss_pred             CchHHHHHHHhhhhccccce-------eeccccCchHHHHHHHHHHHhhcc--------cceecccccCCCCCccceEec
Confidence            34444444556665544322       248899999999999999987641        233334444456555444443


Q ss_pred             hCC---------CCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHH
Q 010842          208 AGV---------SPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANE  274 (499)
Q Consensus       208 ~G~---------g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~  274 (499)
                      .|-         -...+..+|.+       |++.|++.+.++      +.+|++--.....|.+-+    +++|.++|++
T Consensus       143 s~~~~~~~~~~p~~~~~~~~p~~-------d~~~l~~~~~~~------iAavi~EPi~g~~G~~~~~~~~l~~l~~lc~~  209 (387)
T d1vefa1         143 TWEPKYREPFLPLVEPVEFIPYN-------DVEALKRAVDEE------TAAVILEPVQGEGGVRPATPEFLRAAREITQE  209 (387)
T ss_dssp             CCCHHHHGGGCSCSSCEEEECTT-------CHHHHHHHCCTT------EEEEEECSEETTTTSEECCHHHHHHHHHHHHH
T ss_pred             cCCccccCCCCCCCCCceEeCCC-------CHHHHHHhcCCC------eEEEEEECCCCCCCCccCCHHHHHHHHHHHHH
Confidence            331         11245556542       788898887643      334544433344576655    9999999999


Q ss_pred             hCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCc
Q 010842          275 YGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSV  354 (499)
Q Consensus       275 ~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~  354 (499)
                      ||+.+++|+++.|+......+.....++. .|.+++.  |.++..+..+.+..+++..  ..+  .+.+..         
T Consensus       210 ~g~llI~DEV~tGfgR~G~~~~~~~~~v~-PDi~~~g--K~l~gG~~~~~~~~~~~~~--~~~--~~~~~g---------  273 (387)
T d1vefa1         210 KGALLILDEIQTGMGRTGKRFAFEHFGIV-PDILTLA--KALGGGVPLGVAVMREEVA--RSM--PKGGHG---------  273 (387)
T ss_dssp             HTCEEEEECTTTTTTTTSSSSTHHHHTCC-CSEEEEC--GGGGTTSSCEEEEEEHHHH--HTS--CTTSSC---------
T ss_pred             cCceEEecccccccCccCCCcccccCCcC-Cceeeec--ccCCCCccccccccceeee--ecc--ccCCcc---------
Confidence            99999999999876433322222333553 7988875  7776656677777665421  111  111111         


Q ss_pred             ccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC--eEEEcCCCceEEEEEecCCCCCCc
Q 010842          355 VDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSDPR--FEIVVPRHFALVCFRLNPYPHSGS  432 (499)
Q Consensus       355 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~--~~~~~~~~~~~v~f~~~~~~~~~~  432 (499)
                               .+-....+.+.+++..+..-.-.+..++..++.+++.+.|+++..  +.-+. -...+..+.+....    
T Consensus       274 ---------~T~~gnPla~aaa~a~L~~l~~~~~~~~v~~~g~~l~~~L~~l~~~~v~~vr-g~Gl~~~ie~~~~~----  339 (387)
T d1vefa1         274 ---------TTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAIPSPKIREVR-GMGLMVGLELKEKA----  339 (387)
T ss_dssp             ---------CSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTSCCTTEEEEE-EETTEEEEEESSCS----
T ss_pred             ---------ccCCCCcchhhhcccchhhcccccccchHhhhhHHHHHHHHhcCCCceEEEe-ecceEEEEEEeCCc----
Confidence                     111223454444444432211234566677788889999887532  21110 11123445554432    


Q ss_pred             chhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHH
Q 010842          433 ADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGA  490 (499)
Q Consensus       433 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~  490 (499)
                            ...+.+.+.++|.+++..    +...+|++.. ...|++|||+++++|+++.
T Consensus       340 ------~~~~~~~~~~~g~l~~~~----g~~~ir~~Pp-l~it~~~ld~~~~~i~~aL  386 (387)
T d1vefa1         340 ------APYIARLEKEHRVLALQA----GPTVIRFLPP-LVIEKEDLERVVEAVRAVL  386 (387)
T ss_dssp             ------HHHHHHHHHHHCEECEES----STTEEEECCC-TTCCHHHHHHHHHHHHHHH
T ss_pred             ------hHHHHHHHHHCCCeEEec----CCCEEEEECC-ccCCHHHHHHHHHHHHHHh
Confidence                  234445555667543322    3346898873 6789999999999998864

>d1sffa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Escherichia coli [TaxId: 562]

Probab=99.38  E-value=3.2e-10  Score=112.86  Aligned_cols=320  Identities=12%  Similarity=0.038  Sum_probs=174.1

Q ss_pred             HHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHH
Q 010842          128 TELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKL  207 (499)
Q Consensus       128 ~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~  207 (499)
                      ++.+.++.+.+.+++.-....      ...++++||+|+..|+..||....        +..+|-....-|-...-+..+
T Consensus        82 ~~~~~~la~~l~~~~p~~~~~------~v~f~~sGseA~e~Alk~ar~~t~--------r~~ii~~~~~yHG~t~~~~~~  147 (425)
T d1sffa_          82 YEPYLELCEIMNQKVPGDFAK------KTLLVTTGSEAVENAVKIARAATK--------RSGTIAFSGAYHGRTHYTLAL  147 (425)
T ss_dssp             CHHHHHHHHHHHHHSSCSSCE------EEEEESSHHHHHHHHHHHHHHHHT--------CCEEEEETTCCCCSSHHHHHH
T ss_pred             CcHHHHHHHHHHhhhhhcccc------eeeeeccccchhhhHHHHhhhhhc--------ccceEeecCCCcCccccchhh
Confidence            445566677788888532211      247899999999999999997642        222343344456665555555


Q ss_pred             hCCCC----------CCeEEeeCCC--CCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccC----ChhHHHHH
Q 010842          208 AGVSP----------ANIRALPTSV--DANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVD----NVEPLAEV  271 (499)
Q Consensus       208 ~G~g~----------~~v~~v~~~~--~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id----~l~~I~~i  271 (499)
                      .|...          ......+.+.  .+............+.........+.+|++--.....|.+.    -+++|.++
T Consensus       148 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vaavi~EPi~g~~G~~~~~~~~l~~l~~l  227 (425)
T d1sffa_         148 TGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRAL  227 (425)
T ss_dssp             SSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHH
T ss_pred             cCCCCcccCCcccccCCccccCCccccccccchhhHHHHHHHHHhcccccceEEEEecCccCCCCcccCCHHHHHHHHHH
Confidence            54211          1122222211  11011111111111111111122344555543333456553    37999999


Q ss_pred             HHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCC
Q 010842          272 ANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSES  351 (499)
Q Consensus       272 a~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~  351 (499)
                      |++||+.|++|+++.|+......+.....|+ ..|.+++  -|.++..+..|+++++++-  .+.+..  ..        
T Consensus       228 c~~~gillI~DEV~tG~gR~g~~~a~~~~gv-~PDi~~~--gK~l~gG~P~~av~~~~~i--~~~~~~--~~--------  292 (425)
T d1sffa_         228 CDEHGIMLIADEVQSGAGRTGTLFAMEQMGV-APDLTTF--AKSIAGGFPLAGVTGRAEV--MDAVAP--GG--------  292 (425)
T ss_dssp             HHHHTCEEEEECTTTTTTTTSSSSGGGGTTS-CCSEEEE--CGGGGTSSCCEEEEEEHHH--HTTSCT--TS--------
T ss_pred             HHHcCceEEeccccccCCCcchhhHHHhcCC-Cccceec--ccccCCCcceEEEEEcHHH--HHhhCC--CC--------
Confidence            9999999999999988654433333333455 3798886  4888766778999888752  122211  00        


Q ss_pred             CCcccCCCcccCCCCCCCcHHHHHH---HHHhcHHHHHHHHHHHHHHHHHH----HHHHhcCCCeEEEcCCCceEEEEEe
Q 010842          352 NSVVDFKDWQVGTGRRFKSLRLWMV---LRSYGVLNLQSHIRSDIRLAKMF----EGFVKSDPRFEIVVPRHFALVCFRL  424 (499)
Q Consensus       352 ~~~~~~~~~~~~~sr~~~al~~~~~---l~~~g~~g~~~~~~~~~~~a~~l----~~~L~~~~~~~~~~~~~~~~v~f~~  424 (499)
                                ...+-....+.+.++   |..+-.+.   ..++...+.+++    .+.+++.|.+.-+. -...++.+.+
T Consensus       293 ----------~~~T~~gnpl~~aaa~a~L~~i~~~~---~~~~~~~~g~~l~~~l~~~~~~~~~v~~vr-g~Gl~~~i~f  358 (425)
T d1sffa_         293 ----------LGGTYAGNPIACVAALEVLKVFEQEN---LLQKANDLGQKLKDGLLAIAEKHPEIGDVR-GLGAMIAIEL  358 (425)
T ss_dssp             ----------BCCSSSSCHHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHHHHHHHHHTCTTEEEEE-EETTEEEEEE
T ss_pred             ----------CCCCCCcCHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhhhhhhhhHhhCCceEEEE-ccccEEEEEE
Confidence                      011112234444444   44443333   333444444444    44445555433221 1123444444


Q ss_pred             cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHHh
Q 010842          425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRLF  494 (499)
Q Consensus       425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l~  494 (499)
                      ..... .......+...+.+++.++|.++... .. ....+|++.. ...|++|||+++++++++.+++.
T Consensus       359 ~~~~~-~~~~~~~~~~~~~~~l~~~Gvl~~~~-g~-~~n~i~~~Pp-L~it~~eid~~l~~l~~al~eik  424 (425)
T d1sffa_         359 FEDGD-HNKPDAKLTAEIVARARDKGLILLSC-GP-YYNVLRILVP-LTIEDAQIRQGLEIISQCFDEAK  424 (425)
T ss_dssp             BGGGC-TTSBCHHHHHHHHHHHHHTTEECEEE-ST-TSCEEEECCC-TTCCHHHHHHHHHHHHHHHHHHC
T ss_pred             eccCc-cCCccHHHHHHHHHHHHHCCCEEecc-CC-CCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHhc
Confidence            32110 01112356678888999999544332 11 2245898873 66899999999999999988875

>d2gsaa_ c.67.1.4 (A:) Glutamate-1-semialdehyde aminomutase (aminotransferase) {Synechococcus sp., strain GR6 [TaxId: 1131]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Glutamate-1-semialdehyde aminomutase (aminotransferase)
species: Synechococcus sp., strain GR6 [TaxId: 1131]

Probab=99.36  E-value=6.5e-11  Score=117.97  Aligned_cols=325  Identities=10%  Similarity=-0.023  Sum_probs=170.4

Q ss_pred             hHHHHHHHHHHHcccCCcccccChhhHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHh
Q 010842          102 TAGFLGEMLCACFNSVGFNWLASPASTELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAV  181 (499)
Q Consensus       102 ~~~~~~~~l~~~~n~~~~~~~~~p~~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~  181 (499)
                      .|.+ .+.+...+++.......    ...+..+.+.+.++.+....        ..|+++||+||..|+..||...    
T Consensus        70 hp~i-~~ai~~~~~~~~~~~~~----~~~~~~la~~~~~~~~~~~~--------v~f~~sGseA~e~Alk~ar~~t----  132 (427)
T d2gsaa_          70 HPEV-IEALKVAMEKGTSFGAP----CALENVLAEMVNDAVPSIEM--------VRFVNSGTEACMAVLRLMRAYT----  132 (427)
T ss_dssp             CHHH-HHHHHHHHTTCSCCSSC----CHHHHHHHHHHHHHSTTCSE--------EEEESSHHHHHHHHHHHHHHHH----
T ss_pred             cHHH-HHHHHHHHHhcCccccc----hhHHHHHHHHHHhhCCcccc--------ccccCCcHHHHHHHHHHHHHhc----
Confidence            3443 44555556543322222    22344455567777654332        4889999999999999998753    


Q ss_pred             hhhccCCeEEEc-CCCCchhHHHH-------HHHhCCCCC---------CeEEeeCCCCCCCccCHHHHHHHHHHHHHcC
Q 010842          182 GAENMHKLVVYG-SDQTHSTFAKV-------CKLAGVSPA---------NIRALPTSVDANFSLSPQLLRRAVEADVEAG  244 (499)
Q Consensus       182 ~~~g~~~~~i~~-s~~~H~s~~ka-------~~~~G~g~~---------~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g  244 (499)
                           .+..|+. ...-|-...-+       ....++...         +...+|       .-|+++|++.+++.   .
T Consensus       133 -----~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-------~~~~~~le~~~~~~---~  197 (427)
T d2gsaa_         133 -----GRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTP-------YNDLEAVKALFAEN---P  197 (427)
T ss_dssp             -----CCCEEEEETTCCCCSCGGGCSSCCHHHHHTTCCSCSSSCHHHHTTEEEEC-------TTCHHHHHHHHTTS---T
T ss_pred             -----CCCeEEEEecccccCcceeeeecCCcccccCCCCCCCCcccCccceeccC-------cchHHHHHHHHHhC---C
Confidence                 2223433 33445321111       112222110         112222       34899999988752   2


Q ss_pred             CccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCC
Q 010842          245 LVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYL  320 (499)
Q Consensus       245 ~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~  320 (499)
                      ..+.+|++--.....|.+-|    +++|.++|++||++|++|+++.|+ ....-+.....++ ..|.+++.  |.++..+
T Consensus       198 ~~iaavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~-r~g~~~~~~~~gi-~PDi~~~g--K~lggG~  273 (427)
T d2gsaa_         198 GEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVMTGF-RIAYGGVQEKFGV-TPDLTTLG--KIIGGGL  273 (427)
T ss_dssp             TTEEEEEECSSBCSSSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTCHHHHTTC-CCSEEEEC--GGGGTTS
T ss_pred             CCeEEEEEcCCcCCCCCccCCHHHHHHHHHHHHHhceeeeeccccccc-eecccchHHhcCC-CHHHHhhh--hccCCCc
Confidence            23445555554455688877    999999999999999999999775 2222222223344 37888876  5555445


Q ss_pred             cceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCCCCCCcHHHHHHHH---HhcHHHHHHHHHHHHHHHH
Q 010842          321 DCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTGRRFKSLRLWMVLR---SYGVLNLQSHIRSDIRLAK  397 (499)
Q Consensus       321 ~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~---~~g~~g~~~~~~~~~~~a~  397 (499)
                      ..|.++.+++  +.+.+.....+..                 ..+-....+.+.+++.   .+-.+.   ..++..++.+
T Consensus       274 p~~a~~~~~~--i~~~~~~~~~~~~-----------------~~T~~gnpla~AAala~Le~i~~~~---l~~~~~~~g~  331 (427)
T d2gsaa_         274 PVGAYGGKRE--IMQLVAPAGPMYQ-----------------AGTLSGNPLAMTAGIKTLELLRQPG---TYEYLDQITK  331 (427)
T ss_dssp             CCEEEEECHH--HHTTBTTTSSBCC-----------------CCTTTTCHHHHHHHHHHHHHHTSTT---HHHHHHHHHH
T ss_pred             ceeeeeehHH--HHHHhcccCCCcC-----------------CCCCCCCchhhHHHHHhhHHhhhhh---HHhhhhHHHH
Confidence            5667776653  2222221111111                 1111223444444444   443333   3344445555


Q ss_pred             HHHHHH----hcCCC-eEEEcCCCceEEEEEecCCCCCC----cchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEe
Q 010842          398 MFEGFV----KSDPR-FEIVVPRHFALVCFRLNPYPHSG----SADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFA  468 (499)
Q Consensus       398 ~l~~~L----~~~~~-~~~~~~~~~~~v~f~~~~~~~~~----~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~  468 (499)
                      +|.+.|    ++.+. ..+. ... ..+++.+......+    ..........+...+.++|. ++.+...  ..   +.
T Consensus       332 ~l~~~L~~l~~~~~~~~~v~-~~g-gm~~i~~~~~~v~~~~~~~~~d~~~~~~~~~~ll~~Gv-~l~p~~~--~~---~~  403 (427)
T d2gsaa_         332 RLSDGLLAIAQETGHAACGG-QVS-GMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQGI-YLAPSQF--EA---GF  403 (427)
T ss_dssp             HHHHHHHHHHHHTTCCCEEE-EET-TEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHTTE-ECCSSTT--SC---EE
T ss_pred             HHHHHHHHHHhhcCCCcEEc-ccC-CeEEEEEeccCCCCHHHhhcccHHHHHHHHHHHHHCCE-EECCCCC--cc---ee
Confidence            555554    34432 1222 111 23344332211001    00012334567778888884 3443221  11   11


Q ss_pred             ccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          469 VGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       469 ~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      + ...+|++|||+++++++++.++|
T Consensus       404 ~-~l~~Te~dId~~l~al~~al~~L  427 (427)
T d2gsaa_         404 T-SLAHTEEDIDATLAAARTVMSAL  427 (427)
T ss_dssp             C-CTTCCHHHHHHHHHHHHHHHTCC
T ss_pred             C-CCCCCHHHHHHHHHHHHHHHHhC
Confidence            2 35579999999999999987653

>d1z7da1 c.67.1.4 (A:7-410) Ornithine aminotransferase {Plasmodium yoelii yoelii [TaxId: 73239]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Ornithine aminotransferase
species: Plasmodium yoelii yoelii [TaxId: 73239]

Probab=99.36  E-value=4.3e-10  Score=111.11  Aligned_cols=302  Identities=9%  Similarity=0.016  Sum_probs=161.0

Q ss_pred             HHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcC-CCCchhHHHHHHHhCCC-
Q 010842          134 VMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGS-DQTHSTFAKVCKLAGVS-  211 (499)
Q Consensus       134 ~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s-~~~H~s~~ka~~~~G~g-  211 (499)
                      +.+.++++.+.+.         ..++.+||+|+..|+..+|......... ......+... ...|.....+....+.. 
T Consensus        86 ~~~~~~~~~~~~~---------v~~~~sgs~a~~~a~k~ar~~~~~~~~~-~~~~~~~~~~~~~~hg~~~~~~~~~~~~~  155 (404)
T d1z7da1          86 CERYLTNLLGYDK---------VLMMNTGAEANETAYKLCRKWGYEVKKI-PENMAKIVVCKNNFSGRTLGCISASTTKK  155 (404)
T ss_dssp             HHHHHHHHHTCSE---------EEEESSHHHHHHHHHHHHHHHHHHTSCC-CTTCCEEEEETTC----------------
T ss_pred             HHHhhhhccccce---------eeeeccccchHHHHHHHHHHHHhhcccc-cccccccccccccCCCCcccccccccccc
Confidence            3344777777644         3889999999999999998764332100 0012223332 23343333333322211 


Q ss_pred             --------CCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHHHhCCEE
Q 010842          212 --------PANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVANEYGIWV  279 (499)
Q Consensus       212 --------~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~~~~~~l  279 (499)
                              ...+..+|.+       +.+.|+..+.+     ..+.+|++--.....|.+-|    +++|.++|++||+.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~-------~~~~l~~~~~~-----~~iAavi~EPi~g~~G~~~~~~~fl~~l~~lc~~~g~ll  223 (404)
T d1z7da1         156 CTSNFGPFAPQFSKVPYD-------DLEALEEELKD-----PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLF  223 (404)
T ss_dssp             ----------CEEEECTT-------CHHHHHHHHTS-----TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEE
T ss_pred             cccCCCCCCccccccccc-------hHHHHHHHhcC-----CCEEEEEEEEEcCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence                    0123333322       45566555432     23445555444555677766    899999999999999


Q ss_pred             EeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCC
Q 010842          280 HVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFK  358 (499)
Q Consensus       280 hvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~  358 (499)
                      ++|.++.|+......+.....|+. .|.+++.  |.++.. +.+|.++++++-  .+.+.  +.....            
T Consensus       224 I~DEV~tGfgRtG~~~~~e~~gv~-PDivt~g--K~l~gG~~p~~~v~~~~~i--~~~~~--~~~~~~------------  284 (404)
T d1z7da1         224 VADEVQTGLGRTGKLLCVHHYNVK-PDVILLG--KALSGGHYPISAVLANDDI--MLVIK--PGEHGS------------  284 (404)
T ss_dssp             EEECTTTTTTTTSSSSGGGGGTCC-CSEEEEC--GGGGTTSSCCEEEEECHHH--HTTCC--TTCCCC------------
T ss_pred             EEEcCccCCCcccccccccccCCC-CCEEEEc--ccccCCCCCcccccchHHH--HccCC--CCCcCc------------
Confidence            999999776443333333344553 7988775  777654 467888877642  11111  111100            


Q ss_pred             CcccCCCCCCCcHHHHHHHHHhcHHHHHHHH-HHHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCCCCCCcchhHH
Q 010842          359 DWQVGTGRRFKSLRLWMVLRSYGVLNLQSHI-RSDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPYPHSGSADTEM  437 (499)
Q Consensus       359 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~-~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~  437 (499)
                        | -.+.+..+.....+|..+-.+.+.+.+ +....+.+.+.+.+++.+.+.-+. -...+..+.+..+.        .
T Consensus       285 --T-~~gnpl~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~vr-g~Gl~~~i~~~~~~--------~  352 (404)
T d1z7da1         285 --T-YGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRELKDSKIVRDVR-GKGLLCAIEFKNEL--------V  352 (404)
T ss_dssp             --T-TTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTTCTTEEEEE-EETTEEEEEECTTT--------C
T ss_pred             --C-CCCCcchhhhhhhhhhhhhcchhhhhhccchhHHHHHHHHHHhcCCCeEEEE-eeCcEEEEEEcCCc--------c
Confidence              0 011122223334444444444433333 334445556666666666543221 11234455554422        0


Q ss_pred             HHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          438 LNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       438 ~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      ...++..++.++|..+ .+  . +...+|++. ....|++|||+++++|+++++++
T Consensus       353 ~~~~~~~~l~~~Gl~~-~~--~-~~~~ir~~P-pl~it~~~id~~~~~l~~alk~~  403 (404)
T d1z7da1         353 NVLDICLKLKENGLIT-RD--V-HDKTIRLTP-PLCITKEQLDECTEIIVKTVKFF  403 (404)
T ss_dssp             CHHHHHHHHHHTTEEC-CE--E-TTTEEEECC-CTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHhCCeEE-ec--C-CCCEEEEEC-CcCCCHHHHHHHHHHHHHHHHhh
Confidence            1345777888889432 22  2 224589886 35679999999999999998865

>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: AAT-like
domain: Alliinase
species: Garlic (Allium sativum) [TaxId: 4682]

Probab=99.33  E-value=1.4e-11  Score=122.27  Aligned_cols=293  Identities=9%  Similarity=-0.069  Sum_probs=172.2

Q ss_pred             hHHHHHHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHH
Q 010842          127 STELEIVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCK  206 (499)
Q Consensus       127 ~~~lE~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~  206 (499)
                      ..+|++++.+.. +..|-....    ....++++|+|+++..++.+.......   ....++..|+++.+.+..+...++
T Consensus       102 ~~~L~~~i~~lh-~~~gna~t~----~~~IvvG~Gsteli~~~~~AL~~~~~~---~~~~pg~~Vv~~~P~y~~Y~~~~~  173 (425)
T d2hoxa1         102 SFELEKTIKELH-EVVGNAAAK----DRYIVFGVGVTQLIHGLVISLSPNMTA---TPDAPESKVVAHAPFYPVFREQTK  173 (425)
T ss_dssp             CHHHHHHHHHHH-HHHTCBCCT----TCEEEEESHHHHHHHHHHHHHSCCTTT---CTTSCCEEEEECSSCCHHHHHHHH
T ss_pred             CHHHHHHHHHHH-hhhCCCCCC----CCEEEECCCHHHHHHHHHHHhcccccc---ccCCCCCEEEEecCccccHHHHHH
Confidence            357888766543 444532110    013688888888777666655211000   001156789999999999999999


Q ss_pred             HhCCCCCCeEEeeCCCCCCCccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCChhHHHHHHHHhCCEEEeecccc
Q 010842          207 LAGVSPANIRALPTSVDANFSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDNVEPLAEVANEYGIWVHVDAAYA  286 (499)
Q Consensus       207 ~~G~g~~~v~~v~~~~~~~~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~l~~I~~ia~~~~~~lhvD~A~g  286 (499)
                      ++|.   ....        |.+|.+.++++++++      +.+++++.|+||||.+..       +-.+++++++|.+|.
T Consensus       174 ~~~~---~~~~--------~~~D~~~~~~~~~~~------~~ii~l~sPnNPtG~l~~-------~v~~~~~~I~DEaY~  229 (425)
T d2hoxa1         174 YFDK---KGYV--------WAGNAANYVNVSNPE------QYIEMVTSPNNPEGLLRH-------AVIKGCKSIYDMVYY  229 (425)
T ss_dssp             HSCB---TTEE--------EEEEGGGGTTCSCGG------GEEEEEESSCTTTCCCCC-------CSSTTCEEEEECTTC
T ss_pred             HcCC---CCCc--------cCCCHHHHHhhCCCC------ceEEEEECCCCCCcchhh-------hhhhCCEEEEecccc
Confidence            9887   4443        345666666665544      348999999999999732       123589999999995


Q ss_pred             chhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcCCccCCCCCCCCCCCcccCCCcccCCC
Q 010842          287 GSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALSTDPEYLKNKPSESNSVVDFKDWQVGTG  365 (499)
Q Consensus       287 ~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s  365 (499)
                      ...+.     +. .....-+.+..+..|.++.| .-.|+++++++....+.... ..+....                . 
T Consensus       230 ~~~f~-----~~-~~~~~~~Ivl~S~SK~fglaGlRiGw~i~~~~~i~~~~~~~-~~~~~~~----------------v-  285 (425)
T d2hoxa1         230 WPHYT-----PI-KYKADEDILLFTMSKFTGHSGSRFGWALIKDESVYNNLLNY-MTKNTEG----------------T-  285 (425)
T ss_dssp             STTTS-----CC-CSCBCCSEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHHH-HHHHTSS----------------C-
T ss_pred             Ccccc-----ch-hhhcCCeEEEEeCHHhccCcchheeeEEeCCHHHHHHHHHh-hccCccc----------------C-
Confidence            43211     11 11122467888899998855 66899888887543222111 1111000                0 


Q ss_pred             CCCCcHHHHHHHHHh-------------cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEcCCC--------------ce
Q 010842          366 RRFKSLRLWMVLRSY-------------GVLNLQSHIRSDIRLAKMFEGFVKSDPRFEIVVPRH--------------FA  418 (499)
Q Consensus       366 r~~~al~~~~~l~~~-------------g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~--------------~~  418 (499)
                         ..+...+++..+             ..+-++...++..+..+++.+.|++.+.+.+...|.              ..
T Consensus       286 ---s~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~~~~~~~l~~r~~~l~~~L~~~~~~~l~~~p~~~~~~f~~~~~~~~~~  362 (425)
T d2hoxa1         286 ---PRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPS  362 (425)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCS
T ss_pred             ---CHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceeeccCCccceeeeeeccCCCcc
Confidence               112222222222             223455556666777788888998886665432222              12


Q ss_pred             EEEEEecCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeEC-CEEEEEEeccCCCCcHHHHHHHHHHHHHHHH
Q 010842          419 LVCFRLNPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVG-GLYMLRFAVGASLTDERHVVAAWELIMEGAD  491 (499)
Q Consensus       419 ~v~f~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~  491 (499)
                      ...+++....       .   +.+.+.|.+.|+++..+..++ +..++|+++.   .+++++++++++|+++.+
T Consensus       363 f~wl~~~~~~-------~---~~~~~lL~e~gI~v~pGs~FG~~~~yvRisl~---~~~e~ld~~l~rL~~~v~  423 (425)
T d2hoxa1         363 YAWVKCEWEE-------D---KDCYQTFQNGRINTQNGVGFEASSRYVRLSLI---KTQDDFDQLMYYLKDMVK  423 (425)
T ss_dssp             EEEEEECSGG-------G---CSHHHHHHHTTEECEEGGGGTSCTTEEEEECS---SCHHHHHHHHHHHHHHHT
T ss_pred             eeeeeCCCCh-------H---HHHHHHHHhCCEEEEechhcCCCCCEEEEEec---CCHHHHHHHHHHHHHHHh
Confidence            2233332211       1   112344556676666655554 3468999986   578899999999998764

>d1zoda1 c.67.1.4 (A:3-433) Dialkylglycine decarboxylase {Pseudomonas cepacia [TaxId: 292]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Dialkylglycine decarboxylase
species: Pseudomonas cepacia [TaxId: 292]

Probab=99.30  E-value=3.7e-10  Score=112.62  Aligned_cols=320  Identities=14%  Similarity=0.018  Sum_probs=165.7

Q ss_pred             HHHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCCeEEEcCCCCchhHHHHHHHhCC-
Q 010842          132 IVVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHKLVVYGSDQTHSTFAKVCKLAGV-  210 (499)
Q Consensus       132 ~~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~~~i~~s~~~H~s~~ka~~~~G~-  210 (499)
                      .++.+.|+++..-..+       ...|+++||+|+..|+..||....        ++.++-.....|-...-+....+- 
T Consensus        86 ~~la~~L~~~~~~~~~-------~v~f~~sGseA~e~Alk~Ar~~t~--------r~~i~~~~~~yHG~t~~~~~~~~~~  150 (431)
T d1zoda1          86 VDLATRLANITPPGLD-------RALLLSTGAESNEAAIRMAKLVTG--------KYEIVGFAQSWHGMTGAAASATYSA  150 (431)
T ss_dssp             HHHHHHHHHHSCTTCC-------EEEEESCHHHHHHHHHHHHHHHHT--------CCEEEEETTCCCCSSHHHHHTCCSS
T ss_pred             HHHHHHHHHhCCcccc-------eeeecccccchHHHHHHHHHHhcC--------Ccceeecccccccccchhhcccccc
Confidence            3455667777632211       248999999999999999987631        223333444456555444443321 


Q ss_pred             -------CCCCeEEeeCCCCC-------CCccCHHHHHHHHHHHHH-cCCccEEEEEecCCCcccccCC----hhHHHHH
Q 010842          211 -------SPANIRALPTSVDA-------NFSLSPQLLRRAVEADVE-AGLVPLFLCATVGTTSTTAVDN----VEPLAEV  271 (499)
Q Consensus       211 -------g~~~v~~v~~~~~~-------~~~~d~~~L~~~i~~~~~-~g~~p~~vv~t~gtt~~G~id~----l~~I~~i  271 (499)
                             .......++.....       ....+.++++........ ....+.+|++--.....|.+.|    +++|.++
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~l  230 (431)
T d1zoda1         151 GRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRK  230 (431)
T ss_dssp             CCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHH
T ss_pred             cccccCCcccCceeeeeecccccccccccchhhhhhHHHHHHHHHHhccccccceeeccccccCCccCCCHHHHHHHHHH
Confidence                   11123334322110       011234445444433222 2234444444443344566644    8999999


Q ss_pred             HHHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCC
Q 010842          272 ANEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSES  351 (499)
Q Consensus       272 a~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~  351 (499)
                      |++||+.|++|+++.|+......+.....|+. .|.+++.  |.++..+..+.++++++.. ......  .....     
T Consensus       231 c~~~gillI~DEV~tG~gRtG~~~~~~~~gv~-PDi~~~g--K~l~gG~p~~av~~~~~~~-~~~~~~--~~~~~-----  299 (431)
T d1zoda1         231 CEARGMLLILDEAQTGVGRTGTMFACQRDGVT-PDILTLS--KTLGAGLPLAAIVTSAAIE-ERAHEL--GYLFY-----  299 (431)
T ss_dssp             HHHHTCEEEEECTTTTTTTTSSSSTHHHHTCC-CSEEEEC--HHHHTTSSCEEEEECHHHH-HHHHHT--TCCCC-----
T ss_pred             HHhcCceEEeccccccccccccccccccCCCC-cchhccc--cccccccccceeeeeecch-hhhhcc--ccccc-----
Confidence            99999999999999886544333333334553 8998885  6665555566666665321 111110  01100     


Q ss_pred             CCcccCCCcccCCCCCCCcHH---HHHHHHHhcHHHHHHHHH-HHHHHHHHHHHHHhcCCCeEEEcCCCceEEEEEecCC
Q 010842          352 NSVVDFKDWQVGTGRRFKSLR---LWMVLRSYGVLNLQSHIR-SDIRLAKMFEGFVKSDPRFEIVVPRHFALVCFRLNPY  427 (499)
Q Consensus       352 ~~~~~~~~~~~~~sr~~~al~---~~~~l~~~g~~g~~~~~~-~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~  427 (499)
                                  .+....++.   ..+++..+..+.+.+.+. ....+.+.+.+.+.+.|-+.-+. -...++.+.+...
T Consensus       300 ------------~T~~g~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~i~~vr-G~Glm~~ie~~~~  366 (431)
T d1zoda1         300 ------------TTHVSDPLPAAVGLRVLDVVQRDGLVARANVMGDRLRRGLLDLMERFDCIGDVR-GRGLLLGVEIVKD  366 (431)
T ss_dssp             ------------CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTTEEEEE-EETTEEEEEEEEE
T ss_pred             ------------CCCCCCcchHHHHHHHHHHhhhhhhhHHHHHHHHHHhhhhhhhhhcCCCeEEEe-ecceEEEEEEecC
Confidence                        111122333   334444444444332222 22233344444445555332111 1112333333211


Q ss_pred             CCCCcchhHHHHHHHHHHHHhcCCEEEEeeeE-CCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHHH
Q 010842          428 PHSGSADTEMLNRKLLDWVNSTGRVYLTHTIV-GGLYMLRFAVGASLTDERHVVAAWELIMEGADRL  493 (499)
Q Consensus       428 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~l  493 (499)
                      . ......+....++.+.+.++|... ..... .....+|++.. ...|++|||+++++|.++.++.
T Consensus       367 ~-~~~~~~~~~~~~i~~~~~~~Gl~~-~~~~~~~~~~~i~l~Pp-l~it~~eid~~~~~l~~al~~v  430 (431)
T d1zoda1         367 R-RTKEPADGLGAKITRECMNLGLSM-NIVQLPGMGGVFRIAPP-LTVSEDEIDLGLSLLGQAIERA  430 (431)
T ss_dssp             T-TTTEECTTHHHHHHHHHHHTTEEC-CEECCTTSCCEEEECCC-TTCCHHHHHHHHHHHHHHHHHH
T ss_pred             C-cccCccHHHHHHHHHHHHHhCccc-CeeeecCCCCEEEEECC-CCCCHHHHHHHHHHHHHHHHHh
Confidence            1 011112345667788888888421 11111 12356999873 6689999999999999998875

>d1s0aa_ c.67.1.4 (A:) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA
species: Escherichia coli [TaxId: 562]

Probab=99.26  E-value=4.5e-09  Score=104.27  Aligned_cols=309  Identities=9%  Similarity=-0.021  Sum_probs=168.3

Q ss_pred             HHHHHHHHHcCCCCccccCCCccEEEcCChHHHHHHHHHHHHHHHHhHhhhhccCC-eEEEcCCCCchhHHHHHHHhCC-
Q 010842          133 VVMDWLATMLKLPKTFMFSGTGGGVIQNTTSDSILVTLIAARDRALDAVGAENMHK-LVVYGSDQTHSTFAKVCKLAGV-  210 (499)
Q Consensus       133 ~~~~~la~l~g~~~~~~~~~~~~g~~t~ggt~A~~~al~~ar~~~~~~~~~~g~~~-~~i~~s~~~H~s~~ka~~~~G~-  210 (499)
                      ++.+.+.+..+.+..       ..+++.+||+|+-.|+..+|.....+    |.++ .+|......|-...-++.+.|- 
T Consensus        90 ~l~~~l~~~~~~~~~-------~v~f~~sGseA~e~A~k~ar~~~~~~----g~~~~~ii~~~~~yHG~t~~a~~~t~~~  158 (429)
T d1s0aa_          90 ELCRKLVAMTPQPLE-------CVFLADSGSVAVEVAMKMALQYWQAK----GEARQRFLTFRNGYHGDTFGAMSVCDPD  158 (429)
T ss_dssp             HHHHHHHHHSCTTCC-------EEEEESSHHHHHHHHHHHHHHHHHHH----TCCCCEEEEETTCCCCSSHHHHTTSCTT
T ss_pred             HHHHHHHhhhccCcc-------eeeeccccccchhhhhhhhhheeecc----cccccEEEEecCCccccchhhhhhcCCc
Confidence            344557777765433       24889999999999999998764332    2233 3344444456655555554432 


Q ss_pred             ---------CCCCeEEeeCCCC-CCCcc---CHHHHHHHHHHHHHcCCccEEEEEecC-CCccccc--CC--hhHHHHHH
Q 010842          211 ---------SPANIRALPTSVD-ANFSL---SPQLLRRAVEADVEAGLVPLFLCATVG-TTSTTAV--DN--VEPLAEVA  272 (499)
Q Consensus       211 ---------g~~~v~~v~~~~~-~~~~~---d~~~L~~~i~~~~~~g~~p~~vv~t~g-tt~~G~i--d~--l~~I~~ia  272 (499)
                               ........|.... .....   +++++++.+.+   .+..+.+|++.-. .+.-|.+  ++  +++|.++|
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~iaavivEPi~~~~gg~~~~~~~fl~~lr~lc  235 (429)
T d1s0aa_         159 NSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAA---HRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKIC  235 (429)
T ss_dssp             TTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHH---HTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHH
T ss_pred             cccccccCccccccccccccccccccccchhhhhhhhhhhhh---cCCccceeeecceeccCCCccCCCHHHHHHHHHHH
Confidence                     0112222332211 11123   34444444433   3344544444422 2333333  22  89999999


Q ss_pred             HHhCCEEEeeccccchhccCccchhhhcCCCCCceeEecccccccCC-CcceEEEEeCchhHHHhhcC-CccCCCCCCCC
Q 010842          273 NEYGIWVHVDAAYAGSACICPEFRHYLNGIERVDSFSFSPHKWLLSY-LDCCCLWVKQPGLLVKALST-DPEYLKNKPSE  350 (499)
Q Consensus       273 ~~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~r~~~~l~~~~~~-~~~yl~~~~~~  350 (499)
                      ++||+.+++|.++.|+.....-+.....++. .|.+++.  |.++.. ...|+++++++-  .+.+.. ....+..    
T Consensus       236 ~~~gillI~DEV~tGfGRtG~~~~~~~~~v~-PDi~~~g--K~l~gG~~p~~av~~~~~i--~~~~~~~~~~~~~~----  306 (429)
T d1s0aa_         236 DREGILLIADEIATGFGRTGKLFACEHAEIA-PDILCLG--KALTGGTMTLSATLTTREV--AETISNGEAGCFMH----  306 (429)
T ss_dssp             HHHTCEEEEECTTTTTTTTSSSSGGGGGTCC-CSEEEEC--GGGGTSSSCCEEEEECHHH--HHHHHTSTTSSCSC----
T ss_pred             HHcCcceehhhccccccccccccccccceec-ccccccc--cccccccccccchhhHHHH--HhccCCCCCcceee----
Confidence            9999999999999887544333333334543 7888875  555333 457777777642  122221 1111111    


Q ss_pred             CCCcccCCCcccCCCCCCCcHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEEcCCCceEEEEEecCC
Q 010842          351 SNSVVDFKDWQVGTGRRFKSLRLWMVLRSYGVLNLQSHIRSDIRLAKMFEGFVKSD---PRFEIVVPRHFALVCFRLNPY  427 (499)
Q Consensus       351 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~~---~~~~~~~~~~~~~v~f~~~~~  427 (499)
                                  ..+.....+.+.+++..+..-.-++..++..++.++|.+.|+++   +.+.=+ .-...+.++.+..+
T Consensus       307 ------------~~T~~gnp~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~~L~~l~~~~~v~~v-rg~Gl~~~~e~~~~  373 (429)
T d1s0aa_         307 ------------GPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLREQLAPARDAEMVADV-RVLGAIGVVETTHP  373 (429)
T ss_dssp             ------------CCTTTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGGGCTTEEEE-EEETTEEEEEESSC
T ss_pred             ------------cCCCCCCcccchhhhccccccccccccchhhHHHHHHHHHHHHhccCCceEEE-eecccEEEEEecCc
Confidence                        11222234555555544422111345667777888888888654   222111 01122445555432


Q ss_pred             CCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          428 PHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       428 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      .         ...++.+.+.++|.+ +.+.   + ..+|++.. ...|++|||+++++|.++.++
T Consensus       374 ~---------~~~~~~~~~~~~Gl~-~~~~---g-~~i~~~Pp-l~it~~eid~~~~~l~~al~e  423 (429)
T d1s0aa_         374 V---------NMAALQKFFVEQGVW-IRPF---G-KLIYLMPP-YIILPQQLQRLTAAVNRAVQD  423 (429)
T ss_dssp             B---------CHHHHHHHHHHTTEE-CCCB---T-TEEEECCC-TTCCHHHHHHHHHHHHHHTSS
T ss_pred             c---------cHHHHHHHHHHCCcE-EEec---C-CEEEEeCC-cCCCHHHHHHHHHHHHHHHHh
Confidence            2         145677788888843 2221   2 36898863 567999999999999887543

>d1ohwa_ c.67.1.4 (A:) 4-aminobutyrate aminotransferase, GABA-aminotransferase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: PLP-dependent transferase-like
superfamily: PLP-dependent transferases
family: GABA-aminotransferase-like
domain: 4-aminobutyrate aminotransferase, GABA-aminotransferase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.21  E-value=3.2e-09  Score=106.47  Aligned_cols=290  Identities=11%  Similarity=0.034  Sum_probs=160.9

Q ss_pred             EEEcCChHHHHHHHHHHHHHHHHhHhh-----------------hhccCCeEEEc-CCCCchhHHHHHHHhCCC------
Q 010842          156 GVIQNTTSDSILVTLIAARDRALDAVG-----------------AENMHKLVVYG-SDQTHSTFAKVCKLAGVS------  211 (499)
Q Consensus       156 g~~t~ggt~A~~~al~~ar~~~~~~~~-----------------~~g~~~~~i~~-s~~~H~s~~ka~~~~G~g------  211 (499)
                      .+++++||+|+..|+..||.....+..                 ..+.++..|++ ....|-...-+..+.|-.      
T Consensus       120 v~f~~sGseAve~Aik~Ar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~~~~syHG~t~~a~s~tg~~~~~~~~  199 (461)
T d1ohwa_         120 LITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKID  199 (461)
T ss_dssp             EEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHTCCSCHHHHTT
T ss_pred             eeeecchhhhhHHHHHHHHHHhhhcccCcccccchhhhhhhhccccCCCCceEEEecCCcCCCCcccccccCCccccccc
Confidence            589999999999999999865432210                 11223334444 455576655555544320      


Q ss_pred             --CCCeEEeeCCCC-CC-----------CccCHHHHHHHHHHHHHcCCccEEEEEecCCCcccccCC----hhHHHHHHH
Q 010842          212 --PANIRALPTSVD-AN-----------FSLSPQLLRRAVEADVEAGLVPLFLCATVGTTSTTAVDN----VEPLAEVAN  273 (499)
Q Consensus       212 --~~~v~~v~~~~~-~~-----------~~~d~~~L~~~i~~~~~~g~~p~~vv~t~gtt~~G~id~----l~~I~~ia~  273 (499)
                        .......|.... ..           ...+.++|++.+.........+.+|++--.....|.+-|    +++|.++|+
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPi~g~~G~~~~~~~fl~~lr~lc~  279 (461)
T d1ohwa_         200 IPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISR  279 (461)
T ss_dssp             CCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHH
T ss_pred             ccccCCcccccccccccccccccccchhhhhhHHHHHHHHHHHHhCCCccceeeeccccccccccCchhhHHHHHHHHHH
Confidence              001111221110 00           012356777777665555555666666555555566533    899999999


Q ss_pred             HhCCEEEeeccccchhccCccchhhhcCCC-CCceeEecccccccCCCcceEEEEeCchhHHHhhcCCccCCCCCCCCCC
Q 010842          274 EYGIWVHVDAAYAGSACICPEFRHYLNGIE-RVDSFSFSPHKWLLSYLDCCCLWVKQPGLLVKALSTDPEYLKNKPSESN  352 (499)
Q Consensus       274 ~~~~~lhvD~A~g~~~~~~~~~~~~~~g~~-~aDsi~~~~hK~l~~p~~~g~l~~r~~~~l~~~~~~~~~yl~~~~~~~~  352 (499)
                      +||+.|++|+++.|+.....-+.....+++ ..|.+++.  |.++    +|.+....      .+.....+.        
T Consensus       280 ~~gillI~DEV~tG~gRtG~~~~~e~~gi~~~PDiv~~g--K~l~----~g~~~~~~------~~~~~~~~~--------  339 (461)
T d1ohwa_         280 KHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFS--KKMM----TGGFFHKE------EFRPNAPYR--------  339 (461)
T ss_dssp             HTTCEEEEECTTTCSSTTSSSSGGGGGCCSSCCSEEEEC--GGGS----SEEEEECG------GGSCSSTTS--------
T ss_pred             hhCcceeccccccccccccccccccccccccCchhhhhh--hccc----cccccccc------ccccccccc--------
Confidence            999999999999776433222222334554 47888875  5443    34444432      111111111        


Q ss_pred             CcccCCCcccCCCCCCCcHHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCe-EEEcCCCceEEEEEe
Q 010842          353 SVVDFKDWQVGTGRRFKSLRLWM---VLRSYGVLNLQSHIRSDIRLAKMFEGFVKS----DPRF-EIVVPRHFALVCFRL  424 (499)
Q Consensus       353 ~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~~~~~~~~a~~l~~~L~~----~~~~-~~~~~~~~~~v~f~~  424 (499)
                               ...+.....+.+.+   +|+.+..+   +.+++..++.++|.+.|++    .|.+ .-+. -...++.+.+
T Consensus       340 ---------~~~T~~g~p~~~aaa~a~l~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~~i~~vr-G~Gl~~~ie~  406 (461)
T d1ohwa_         340 ---------IFNTWLGDPSKNLLLAEVINIIKRE---DLLSNAAHAGKVLLTGLLDLQARYPQFISRVR-GRGTFCSFDT  406 (461)
T ss_dssp             ---------SCCSCSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHHHHHHHHHCTTTCEEEE-EETTEEEEEC
T ss_pred             ---------cccccccccccchhhcccchhhhhh---hHHHHHHHHHHHHHHHHHHHHhhCCCceEEee-eeeEEEEEEc
Confidence                     01111223344444   44444333   3445555666666666554    4432 1111 1122445555


Q ss_pred             cCCCCCCcchhHHHHHHHHHHHHhcCCEEEEeeeECCEEEEEEeccCCCCcHHHHHHHHHHHHHHHHH
Q 010842          425 NPYPHSGSADTEMLNRKLLDWVNSTGRVYLTHTIVGGLYMLRFAVGASLTDERHVVAAWELIMEGADR  492 (499)
Q Consensus       425 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lRi~~~~~~~t~~di~~l~~~l~~~~~~  492 (499)
                      ..         .....++.+.+.++|.++ .+.   +...||+.. ....|++|||.++++|.++.++
T Consensus       407 ~~---------~~~~~~i~~~~~~~Gll~-~~~---~~~~ir~~P-pL~it~~eid~~~~~l~~~l~e  460 (461)
T d1ohwa_         407 PD---------ESIRNKLISIARNKGVML-GGC---GDKSIRFRP-TLVFRDHHAHLFLNIFSDILAD  460 (461)
T ss_dssp             SS---------HHHHHHHHHHHHHTTEEC-EEE---TTTEEECCC-CTTCCHHHHHHHHHHHHHHHHT
T ss_pred             CC---------HHHHHHHHHHHHHCCeEE-eeC---CCCEEEEeC-CcCCCHHHHHHHHHHHHHHHhc
Confidence            33         456778889999999533 322   235689887 3667999999999999998765