Citrus Sinensis ID: 012487

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460--
MFRATDLLGKCSKPSRVGSLLSKIRHQARDTRAVQAYEPNVDRYHINGEYAKVDWCELGNKEVSPSSEIVNHGLSSLSLCKSFALSPSPQRQTMLPASDCFKRIHTKASPQSAMNDCELSNDHSDVVEEYANLKWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYHKGYLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVGIQTGRIEDKMGWTVELN
ccccccccccccccccHHHHHHHHHHHHcccHHHHHcccccccEEEcccEEEEEEEEcccccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccEEEEEEEcccccccccEEEEccccccccccccHHHHHHHHHcccccccccccEEEEcHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccccccccccccEEEccEEEEccccccccccccEEEEEEEEcccccccccccEEEEEcEEcccccccccccccccHHcccHHHHHHHHccccEEEEEEcccccEEEEccccEEEEEEccEEEcccccccccccccHHHHHHHHHHccccEEEEEEEccccccccEEcccccEEEEcccEEEEEccEEEEEcccccHHHHHHHHHHHHccccccccccccEEEcc
cccHcHHcccccccccHHHHHHHHHHHHcccHHHHEcccccccEEEcccEEEEEEEHccccccccccccccccccccccccccccccccccHHccccccHHHHcccccccccccccccccccccccHHHHccccHHccccccccccEEEEEEEccccEEcccEEEEcccEEEcccEHHHHcccEEEccEEEEEEcccEEEEEcHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcHHHcccccccEEEEEEEEEEccEcccccccccEEEEEEEEEEccccHHccEEEEEccEEEEccccccccEccccHHHHHHHHHHHHHcccccEEEEccccccEEEEEcccEEEEEEccEEEEccHHHcccccHHHHHHHHHHHHccccEEEcccEccHHHHccEEEEEEcccEEEEEEEEEEcccEEEEcccccHHHHHHHHHHHcccccccccccccEEEEc
mfratdllgkcskpsrvgSLLSKIRHQARDTRavqayepnvdryhingeyakvdwcelgnkevspsseivnhglsslslcksfalspspqrqtmlpasdcfkrihtkaspqsamndcelsndhSDVVEEYANlkwdelgfclipvDYMYVMKcskeknfshgiltrfgrlemnpssgilnyGQGVFEGLKAyrtedgrillfrPEQNALRMQMgadrlrmpsptIEQFVDAVKHTVVankqwvpppgkgslyirpllmgsgpvlgatpapdytflafaspvgnyhkGYLNLVVEEKfyrafpggtggVKAIVNYSTVFKPVAeakakgfsdvlflDVKTAKYIEEVSTSNifflkgnvistpatdgtilpgitrKSVIEIAQILGYQVEERAVAVEELFdseevfctgtamvvnpvnsityqgkrieyktgpETVAQKLYEMLVGIQTgriedkmgwtveln
mfratdllgkcskpsrvgsllskirhqardtravqayepnvdryhiNGEYAKVDWCELGNKEVSPSSEIVNHGLSSLSLCKSFALSPSPQRQTMLPASDCFKRIHTKASPQSAMNDCELSNDHSDVVEEYANLKWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVvankqwvpppgKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYHKGYLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEakakgfsdvlFLDVKTAKYIEEVStsnifflkgnvistpatdgtilpgITRKSVIEIAQILGYQVEERAVAVEELFDSEEVfctgtamvvnpvnsityqgkrieykTGPETVAQKLYEMLVGIqtgriedkmgwtveln
MFRATDLLGKCSKPSRVGSLLSKIRHQARDTRAVQAYEPNVDRYHINGEYAKVDWCELGNKEVSPSSEIVNHGLSSLSLCKSFALSPSPQRQTMLPASDCFKRIHTKASPQSAMNDCELSNDHSDVVEEYANLKWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYHKGYLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVGIQTGRIEDKMGWTVELN
*******************************RAVQAYEPNVDRYHINGEYAKVDWCELGNK*******IVNHGLSSLSLCK*******************************************DVVEEYANLKWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNAL**************TIEQFVDAVKHTVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYHKGYLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVGIQTGRIEDKMGWT****
***ATD*LGKCSKPSRVGSLLSKIRH*ARDTRAVQAYEPNVDRYHINGEYAKVDWCELG*****************************************************************************ELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYHKGYLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVGIQTGRIEDKMGWTVELN
MFRATDLLGKCSKPSRVGSLLSKIRHQARDTRAVQAYEPNVDRYHINGEYAKVDWCELGNKEVSPSSEIVNHGLSSLSLCKSFALSPSPQRQTMLPASDCFKRIHTKASPQSAMNDCELSNDHSDVVEEYANLKWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYHKGYLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVGIQTGRIEDKMGWTVELN
*F**T**LGKCSKPSRVGSLLS**RHQARDTRAVQAYEPNVDRYHINGEYAKVDWCELGNKEVSPSS************************************************************EEYANLKWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYHKGYLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVGIQTGRIEDKMGWTVELN
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MFRATDLLGKCSKPSRVGSLLSKIRHQARDTRAVQAYEPNVDRYHINGEYAKVDWCELGNKEVSPSSEIVNHGLSSLSLCKSFALSPSPQRQTMLPASDCFKRIHTKASPQSAMNDCELSNDHSDVVEEYANLKWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYHKGYLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYKTGPETVAQKLYEMLVGIQTGRIEDKMGWTVELN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query462 2.2.26 [Sep-21-2011]
Q9M439388 Branched-chain-amino-acid yes no 0.720 0.858 0.627 1e-128
Q9LPM9356 Branched-chain-amino-acid no no 0.733 0.952 0.607 1e-125
Q9LPM8367 Putative branched-chain-a no no 0.725 0.912 0.620 1e-124
Q9M401413 Branched-chain-amino-acid no no 0.742 0.830 0.614 1e-124
Q9FYA6415 Branched-chain-amino-acid no no 0.831 0.925 0.564 1e-124
Q9LE06354 Methionine aminotransfera no no 0.725 0.946 0.584 1e-121
Q93Y32384 Branched-chain-amino-acid no no 0.772 0.929 0.569 1e-118
P39576363 Branched-chain-amino-acid yes no 0.703 0.895 0.409 7e-67
Q8CQ78358 Probable branched-chain-a yes no 0.699 0.902 0.394 9e-64
Q5HRJ8358 Probable branched-chain-a yes no 0.699 0.902 0.394 9e-64
>sp|Q9M439|BCAT2_ARATH Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1 Back     alignment and function desciption
 Score =  458 bits (1178), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 211/336 (62%), Positives = 271/336 (80%), Gaps = 3/336 (0%)

Query: 130 YANLKWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGL 189
           YA+L WD LGF L P DYMYVMKCSK+  F+ G L+ +G ++++PS+G+LNYGQ ++EG 
Sbjct: 53  YADLDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGT 112

Query: 190 KAYRTEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKG 249
           KAYR E+G++LLFRP+ NA+RM++GA+R+ MPSP+++QFV+AVK T +ANK+WVPP GKG
Sbjct: 113 KAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKG 172

Query: 250 SLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYHK---GYLNLVVEEKFYRAFPGGTG 306
           +LYIRPLLMGSGP+LG  PAP+YTF+ +ASPVGNY K     LNL VEE++ RA PGG G
Sbjct: 173 TLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEGMAALNLYVEEEYVRAAPGGAG 232

Query: 307 GVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDG 366
           GVK+I NY+ V K ++ AK++GFSDVL+LD    KY+EE S+ N+F +KG  ISTPAT+G
Sbjct: 233 GVKSITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTISTPATNG 292

Query: 367 TILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRI 426
           TIL GITRKSV+EIA   GYQV E+AV V+E+ D++EVFCTGTA+VV PV +ITYQ KR+
Sbjct: 293 TILEGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTITYQEKRV 352

Query: 427 EYKTGPETVAQKLYEMLVGIQTGRIEDKMGWTVELN 462
           EYKTG E+V QKL  +LVGIQTG IED  GW  ++N
Sbjct: 353 EYKTGDESVCQKLRSVLVGIQTGLIEDNKGWVTDIN 388
Converts 2-oxo acids to branched-chain amino acids. Acts on leucine, isoleucine and valine.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 6EC: .EC: 1EC: .EC: 4EC: 2
>sp|Q9LPM9|BCAT6_ARATH Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1 Back     alignment and function description
>sp|Q9LPM8|BCAT7_ARATH Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1 Back     alignment and function description
>sp|Q9M401|BCAT3_ARATH Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1 Back     alignment and function description
>sp|Q9FYA6|BCAT5_ARATH Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1 Back     alignment and function description
>sp|Q9LE06|BCAT4_ARATH Methionine aminotransferase BCAT4 OS=Arabidopsis thaliana GN=BCAT4 PE=1 SV=1 Back     alignment and function description
>sp|Q93Y32|BCAT1_ARATH Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2 Back     alignment and function description
>sp|P39576|ILVE2_BACSU Branched-chain-amino-acid aminotransferase 2 OS=Bacillus subtilis (strain 168) GN=ilvK PE=1 SV=5 Back     alignment and function description
>sp|Q8CQ78|ILVE_STAES Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=ilvE PE=3 SV=1 Back     alignment and function description
>sp|Q5HRJ8|ILVE_STAEQ Probable branched-chain-amino-acid aminotransferase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ilvE PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query462
255537936399 branched-chain amino acid aminotransfera 0.839 0.972 0.580 1e-130
356497021406 PREDICTED: branched-chain-amino-acid ami 0.742 0.844 0.653 1e-130
363807226412 uncharacterized protein LOC100798328 [Gl 0.742 0.832 0.650 1e-129
449450320390 PREDICTED: branched-chain-amino-acid ami 0.768 0.910 0.618 1e-128
255579513417 branched-chain amino acid aminotransfera 0.751 0.832 0.623 1e-128
449451331405 PREDICTED: branched-chain-amino-acid ami 0.764 0.871 0.625 1e-127
6319167377 branched-chain amino acid aminotransfera 0.751 0.920 0.626 1e-127
288310302389 branched chain amino acid transaminase [ 0.766 0.910 0.614 1e-127
388497704411 unknown [Lotus japonicus] 0.742 0.834 0.641 1e-127
15218409388 branched-chain-amino-acid aminotransfera 0.720 0.858 0.627 1e-126
>gi|255537936|ref|XP_002510033.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] gi|223550734|gb|EEF52220.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 235/405 (58%), Positives = 294/405 (72%), Gaps = 17/405 (4%)

Query: 69  IVNHGLSSLSLCKSFALSPSPQRQTMLPASDCFKRIHTKASPQSAMNDCE--------LS 120
           ++  G    SL +S  +S S Q    L A  C+      AS Q  +N           L 
Sbjct: 1   MIRRGRCLHSLVQSLRISSSSQ----LGAYICY--TSQAASSQQRVNKPSANFIFALFLL 54

Query: 121 NDHSDVVEEYANLKWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILN 180
              SD  +EYANL WD LGF + P DYMY+MKC+K+ +F  G L+R+G LE++PS+G+LN
Sbjct: 55  GGSSDGEDEYANLDWDNLGFGVTPTDYMYLMKCAKDGSFVQGQLSRYGNLELSPSAGVLN 114

Query: 181 YGQGVFEGLKAYRTEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVVANK 240
           YGQG++EG KAYR EDGR+LLFRP+QNA+RMQMGADR+ MP P+I+QFVDAVK    +NK
Sbjct: 115 YGQGLYEGTKAYRKEDGRLLLFRPDQNAIRMQMGADRMCMPCPSIDQFVDAVKQVAFSNK 174

Query: 241 QWVPPPGKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYHK---GYLNLVVEEKF 297
           +WVPPPGKG+LYIRPLLMGSGPVLG  PAP+YTFL +ASPVGNY K     LNL +EE+F
Sbjct: 175 RWVPPPGKGTLYIRPLLMGSGPVLGLAPAPEYTFLVYASPVGNYFKEGSAPLNLYIEEEF 234

Query: 298 YRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGN 357
           +RA  GG GGVK+I NY+ V K +A AK +GFSDVL+LD    KY+EEVS+ NIF +KGN
Sbjct: 235 HRASRGGAGGVKSITNYAPVLKAIARAKGRGFSDVLYLDAVNKKYLEEVSSCNIFVVKGN 294

Query: 358 VISTPATDGTILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVN 417
           VIS+P  +GTIL G+TR+S+IEIA  L YQVEERA+ V+EL D++EVFCTGTA+ V PV 
Sbjct: 295 VISSPPANGTILQGVTRRSIIEIACDLNYQVEERAIPVDELMDADEVFCTGTAVGVAPVG 354

Query: 418 SITYQGKRIEYKTGPETVAQKLYEMLVGIQTGRIEDKMGWTVELN 462
           SITYQ +RIEYK   E+V+Q+L   L GI+ G IEDK GW +E+ 
Sbjct: 355 SITYQDRRIEYKIRAESVSQELQSTLEGIKRGLIEDKKGWILEMQ 399

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356497021|ref|XP_003517363.1| PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic-like [Glycine max] Back     alignment and taxonomy information
>gi|363807226|ref|NP_001242355.1| uncharacterized protein LOC100798328 [Glycine max] gi|255635824|gb|ACU18260.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|449450320|ref|XP_004142911.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Cucumis sativus] gi|449494398|ref|XP_004159536.1| PREDICTED: branched-chain-amino-acid aminotransferase 2, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|255579513|ref|XP_002530599.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] gi|223529847|gb|EEF31779.1| branched-chain amino acid aminotransferase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|449451331|ref|XP_004143415.1| PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic-like [Cucumis sativus] gi|449519406|ref|XP_004166726.1| PREDICTED: branched-chain-amino-acid aminotransferase 3, chloroplastic-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|6319167|gb|AAF07192.1|AF193846_1 branched-chain amino acid aminotransferase [Solanum tuberosum] Back     alignment and taxonomy information
>gi|288310302|gb|ADC45390.1| branched chain amino acid transaminase [Cucumis melo] Back     alignment and taxonomy information
>gi|388497704|gb|AFK36918.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|15218409|ref|NP_172478.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|79317492|ref|NP_001031015.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|26391680|sp|Q9M439.1|BCAT2_ARATH RecName: Full=Branched-chain-amino-acid aminotransferase 2, chloroplastic; Short=Atbcat-2; Flags: Precursor gi|13877745|gb|AAK43950.1|AF370135_1 putative tat-binding protein [Arabidopsis thaliana] gi|8249004|emb|CAB93128.1| branched-chain amino acid transaminase [Arabidopsis thaliana] gi|15293209|gb|AAK93715.1| putative tat-binding protein [Arabidopsis thaliana] gi|222424474|dbj|BAH20192.1| AT1G10070 [Arabidopsis thaliana] gi|332190416|gb|AEE28537.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] gi|332190417|gb|AEE28538.1| branched-chain-amino-acid aminotransferase 2 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query462
TAIR|locus:2201921388 BCAT-2 "branched-chain amino a 0.720 0.858 0.630 1.8e-118
TAIR|locus:2031030356 AT1G50110 [Arabidopsis thalian 0.733 0.952 0.607 2.3e-116
TAIR|locus:2031040367 BCAT7 "branched-chain amino ac 0.725 0.912 0.620 4.7e-116
TAIR|locus:2097320413 BCAT3 "branched-chain aminotra 0.831 0.929 0.572 5e-115
TAIR|locus:2091216354 BCAT4 "branched-chain aminotra 0.725 0.946 0.584 7e-113
TAIR|locus:2201931384 BCAT-1 "branched-chain amino a 0.770 0.927 0.575 1.7e-109
TIGR_CMR|GSU_0656357 GSU_0656 "branched-chain amino 0.694 0.899 0.392 3.2e-58
UNIPROTKB|A0R066368 ilvE "Branched-chain-amino-aci 0.701 0.880 0.365 1.6e-54
UNIPROTKB|Q10399368 ilvE "Branched-chain-amino-aci 0.703 0.883 0.367 1.5e-51
ASPGD|ASPL0000058845394 AN0385 [Emericella nidulans (t 0.703 0.824 0.380 9.5e-50
TAIR|locus:2201921 BCAT-2 "branched-chain amino acid transaminase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1149 (409.5 bits), Expect = 1.8e-118, Sum P(2) = 1.8e-118
 Identities = 212/336 (63%), Positives = 272/336 (80%)

Query:   130 YANLKWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGL 189
             YA+L WD LGF L P DYMYVMKCSK+  F+ G L+ +G ++++PS+G+LNYGQ ++EG 
Sbjct:    53 YADLDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGT 112

Query:   190 KAYRTEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKG 249
             KAYR E+G++LLFRP+ NA+RM++GA+R+ MPSP+++QFV+AVK T +ANK+WVPP GKG
Sbjct:   113 KAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALANKRWVPPAGKG 172

Query:   250 SLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYHK-GY--LNLVVEEKFYRAFPGGTG 306
             +LYIRPLLMGSGP+LG  PAP+YTF+ +ASPVGNY K G   LNL VEE++ RA PGG G
Sbjct:   173 TLYIRPLLMGSGPILGLGPAPEYTFIVYASPVGNYFKEGMAALNLYVEEEYVRAAPGGAG 232

Query:   307 GVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDG 366
             GVK+I NY+ V K ++ AK++GFSDVL+LD    KY+EE S+ N+F +KG  ISTPAT+G
Sbjct:   233 GVKSITNYAPVLKALSRAKSRGFSDVLYLDSVKKKYLEEASSCNVFVVKGRTISTPATNG 292

Query:   367 TILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRI 426
             TIL GITRKSV+EIA   GYQV E+AV V+E+ D++EVFCTGTA+VV PV +ITYQ KR+
Sbjct:   293 TILEGITRKSVMEIASDQGYQVVEKAVHVDEVMDADEVFCTGTAVVVAPVGTITYQEKRV 352

Query:   427 EYKTGPETVAQKLYEMLVGIQTGRIEDKMGWTVELN 462
             EYKTG E+V QKL  +LVGIQTG IED  GW  ++N
Sbjct:   353 EYKTGDESVCQKLRSVLVGIQTGLIEDNKGWVTDIN 388
GO:0003824 "catalytic activity" evidence=IEA;ISS
GO:0004084 "branched-chain-amino-acid transaminase activity" evidence=IEA;IGI
GO:0005737 "cytoplasm" evidence=ISM
GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA
GO:0009081 "branched-chain amino acid metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
GO:0009407 "toxin catabolic process" evidence=RCA
GO:0009744 "response to sucrose stimulus" evidence=RCA
GO:0009750 "response to fructose stimulus" evidence=RCA
TAIR|locus:2031030 AT1G50110 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2031040 BCAT7 "branched-chain amino acid transaminase 7" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2097320 BCAT3 "branched-chain aminotransferase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091216 BCAT4 "branched-chain aminotransferase4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2201931 BCAT-1 "branched-chain amino acid transaminase 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|GSU_0656 GSU_0656 "branched-chain amino acid aminotransferase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
UNIPROTKB|A0R066 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium smegmatis str. MC2 155 (taxid:246196)] Back     alignment and assigned GO terms
UNIPROTKB|Q10399 ilvE "Branched-chain-amino-acid aminotransferase" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
ASPGD|ASPL0000058845 AN0385 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M439BCAT2_ARATH2, ., 6, ., 1, ., 4, 20.62790.72070.8582yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.6.10.921
4th Layer2.6.1.420.914

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query462
PLN02782403 PLN02782, PLN02782, Branched-chain amino acid amin 0.0
PLN03117355 PLN03117, PLN03117, Branched-chain-amino-acid amin 0.0
PLN02259388 PLN02259, PLN02259, branched-chain-amino-acid amin 1e-158
PLN02883384 PLN02883, PLN02883, Branched-chain amino acid amin 1e-146
PRK13357356 PRK13357, PRK13357, branched-chain amino acid amin 1e-140
cd01557279 cd01557, BCAT_beta_family, BCAT_beta_family: Branc 1e-116
TIGR01123313 TIGR01123, ilvE_II, branched-chain amino acid amin 1e-109
cd00449256 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependen 6e-79
COG0115284 COG0115, IlvE, Branched-chain amino acid aminotran 2e-71
PRK06606306 PRK06606, PRK06606, branched-chain amino acid amin 6e-46
TIGR01122298 TIGR01122, ilvE_I, branched-chain amino acid amino 3e-42
pfam01063231 pfam01063, Aminotran_4, Aminotransferase class IV 8e-36
cd01558270 cd01558, D-AAT_like, D-Alanine aminotransferase (D 6e-30
PRK07544292 PRK07544, PRK07544, branched-chain amino acid amin 4e-28
cd01559249 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychor 8e-27
PRK08320288 PRK08320, PRK08320, branched-chain amino acid amin 8e-26
PRK13356286 PRK13356, PRK13356, aminotransferase; Provisional 3e-21
PRK07849292 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyas 1e-18
PRK12479299 PRK12479, PRK12479, branched-chain amino acid amin 8e-16
PRK07650283 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyas 2e-14
TIGR03461261 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase 3e-14
PRK06680286 PRK06680, PRK06680, D-amino acid aminotransferase; 4e-14
PRK06092268 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyas 1e-12
TIGR01121276 TIGR01121, D_amino_aminoT, D-amino acid aminotrans 2e-11
PLN02845336 PLN02845, PLN02845, Branched-chain-amino-acid amin 2e-06
PRK12400290 PRK12400, PRK12400, D-amino acid aminotransferase; 3e-06
PRK09266266 PRK09266, PRK09266, hypothetical protein; Provisio 5e-05
>gnl|CDD|215418 PLN02782, PLN02782, Branched-chain amino acid aminotransferase Back     alignment and domain information 
 Score =  536 bits (1382), Expect = 0.0
 Identities = 229/393 (58%), Positives = 291/393 (74%), Gaps = 7/393 (1%)

Query: 74  LSSLSLCKSFALSPSPQRQTMLPASDCFKRIHTKASPQSAMNDCELSNDHSDVVEEYANL 133
           L S S   +F    S   +    +           S      D   S+ +++V E  A++
Sbjct: 14  LHSSSRRLNFPPPSSLSLRHSNSSVSSNPISSKAISLTRC--DAVSSSSYTEVTE-LADI 70

Query: 134 KWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYR 193
            WD LGF L+P DYMY+MKC+++  FS G L RFG +E++PS+G+LNYGQG+FEGLKAYR
Sbjct: 71  DWDNLGFGLVPTDYMYIMKCNRDGEFSKGELQRFGNIELSPSAGVLNYGQGLFEGLKAYR 130

Query: 194 TEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKGSLYI 253
            EDG ILLFRPE+NA+RM+ GA+R+ MP+PT+EQFV+AVK TV+ANK+WVPPPGKGSLYI
Sbjct: 131 KEDGNILLFRPEENAIRMRNGAERMCMPAPTVEQFVEAVKETVLANKRWVPPPGKGSLYI 190

Query: 254 RPLLMGSGPVLGATPAPDYTFLAFASPVGNYHK---GYLNLVVEEKFYRAFPGGTGGVKA 310
           RPLLMGSG VLG  PAP+YTFL + SPVGNY K     +NL+VE +F+RA PGGTGGVK 
Sbjct: 191 RPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYFKEGVAPINLIVENEFHRATPGGTGGVKT 250

Query: 311 IVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTPATDGTILP 370
           I NY+ V K  + AKAKG+SDVL+LD    KY+EEVS+ NIF +K NVISTPA  GTILP
Sbjct: 251 IGNYAAVLKAQSIAKAKGYSDVLYLDCVHKKYLEEVSSCNIFIVKDNVISTPAIKGTILP 310

Query: 371 GITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEY-K 429
           GITRKS+I++A+  G+QVEER V V+EL +++EVFCTGTA+VV+PV SITY+GKR+ Y +
Sbjct: 311 GITRKSIIDVARSQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSITYKGKRVSYGE 370

Query: 430 TGPETVAQKLYEMLVGIQTGRIEDKMGWTVELN 462
            G  TV+Q+LY +L  +Q G IED M WTVEL+
Sbjct: 371 GGFGTVSQQLYTVLTSLQMGLIEDNMNWTVELS 403

Length = 403
>gnl|CDD|178664 PLN03117, PLN03117, Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|177901 PLN02259, PLN02259, branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>gnl|CDD|178471 PLN02883, PLN02883, Branched-chain amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|237363 PRK13357, PRK13357, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|238798 cd01557, BCAT_beta_family, BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>gnl|CDD|233278 TIGR01123, ilvE_II, branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>gnl|CDD|238254 cd00449, PLPDE_IV, PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>gnl|CDD|223193 COG0115, IlvE, Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|235841 PRK06606, PRK06606, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|130192 TIGR01122, ilvE_I, branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>gnl|CDD|216275 pfam01063, Aminotran_4, Aminotransferase class IV Back     alignment and domain information
>gnl|CDD|238799 cd01558, D-AAT_like, D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>gnl|CDD|181025 PRK07544, PRK07544, branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>gnl|CDD|238800 cd01559, ADCL_like, ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>gnl|CDD|236238 PRK08320, PRK08320, branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|237362 PRK13356, PRK13356, aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|236114 PRK07849, PRK07849, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|183549 PRK12479, PRK12479, branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>gnl|CDD|181067 PRK07650, PRK07650, 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>gnl|CDD|132501 TIGR03461, pabC_Proteo, aminodeoxychorismate lyase Back     alignment and domain information
>gnl|CDD|180656 PRK06680, PRK06680, D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|235696 PRK06092, PRK06092, 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>gnl|CDD|130191 TIGR01121, D_amino_aminoT, D-amino acid aminotransferase Back     alignment and domain information
>gnl|CDD|215454 PLN02845, PLN02845, Branched-chain-amino-acid aminotransferase-like protein Back     alignment and domain information
>gnl|CDD|171470 PRK12400, PRK12400, D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>gnl|CDD|236438 PRK09266, PRK09266, hypothetical protein; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 462
PLN02782403 Branched-chain amino acid aminotransferase 100.0
PLN02883384 Branched-chain amino acid aminotransferase 100.0
PLN02259388 branched-chain-amino-acid aminotransferase 2 100.0
KOG0975379 consensus Branched chain aminotransferase BCAT1, p 100.0
PLN03117355 Branched-chain-amino-acid aminotransferase; Provis 100.0
PRK13357356 branched-chain amino acid aminotransferase; Provis 100.0
TIGR01123313 ilvE_II branched-chain amino acid aminotransferase 100.0
TIGR01122298 ilvE_I branched-chain amino acid aminotransferase, 100.0
PRK06606306 branched-chain amino acid aminotransferase; Valida 100.0
COG0115284 IlvE Branched-chain amino acid aminotransferase/4- 100.0
cd01557279 BCAT_beta_family BCAT_beta_family: Branched-chain 100.0
PRK12479299 branched-chain amino acid aminotransferase; Provis 100.0
PRK07544292 branched-chain amino acid aminotransferase; Valida 100.0
PRK08320288 branched-chain amino acid aminotransferase; Review 100.0
PRK13356286 aminotransferase; Provisional 100.0
cd01558270 D-AAT_like D-Alanine aminotransferase (D-AAT_like) 100.0
PRK07650283 4-amino-4-deoxychorismate lyase; Provisional 100.0
PRK06680286 D-amino acid aminotransferase; Reviewed 100.0
TIGR01121276 D_amino_aminoT D-amino acid aminotransferase. Spec 100.0
PRK12400290 D-amino acid aminotransferase; Reviewed 100.0
PLN02845336 Branched-chain-amino-acid aminotransferase-like pr 100.0
PRK07849292 4-amino-4-deoxychorismate lyase; Provisional 100.0
TIGR03461261 pabC_Proteo aminodeoxychorismate lyase. Members of 100.0
PRK06092268 4-amino-4-deoxychorismate lyase; Reviewed 100.0
cd00449256 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes 100.0
cd01559249 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lya 100.0
PRK09266266 hypothetical protein; Provisional 100.0
PF01063231 Aminotran_4: Aminotransferase class IV; InterPro: 100.0
PRK07546209 hypothetical protein; Provisional 100.0
PRK07101187 hypothetical protein; Provisional 99.96
>PLN02782 Branched-chain amino acid aminotransferase Back     alignment and domain information 
Probab=100.00  E-value=2.1e-84  Score=674.69  Aligned_cols=337  Identities=66%  Similarity=1.132  Sum_probs=319.6

Q ss_pred             ChhhccCCCCCCCCccceeeCceEEEEEccCceeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChH
Q 012487          126 VVEEYANLKWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPE  205 (462)
Q Consensus       126 ~~~~~~~~d~~~l~fg~~~tdhm~~~~~~~~~~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d  205 (462)
                      ..++..++||++||||+++||||++++|+++++|.||+|+|++++.|+|.|++||||||||||||+|++.||++++|||+
T Consensus        63 ~~~~~~~~~~~~l~fg~~~td~m~~~~~~~~~~w~ng~ivp~~~~~i~~~d~gl~YGdgvFEg~kayr~~~G~i~lFr~d  142 (403)
T PLN02782         63 EVTELADIDWDNLGFGLVPTDYMYIMKCNRDGEFSKGELQRFGNIELSPSAGVLNYGQGLFEGLKAYRKEDGNILLFRPE  142 (403)
T ss_pred             CCcccccCCccccCCCccccCceEEEEECCCCcEeCCEEEECCCCEeChhhhHHhhhhhhhheEEEEEcCCCcEeeeChH
Confidence            34455689999999999999999999998888899999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCcceEEEEEEeccCCcccccCCCCcEEEEEEeccCCCC
Q 012487          206 QNALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYH  285 (462)
Q Consensus       206 ~Hl~RL~~SA~~L~mp~~~~e~l~~~I~~lv~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~~~~~~~I~~~P~~~y~  285 (462)
                      +|++||++||++|+||.++.++|+++|+++++.|+.|||+.+.+++||||+++|+++.+|+.++.+++++|+++|+++|+
T Consensus       143 ~H~~RL~~SA~rL~lp~~~~e~l~~~i~~lv~~n~~~vP~~~~~~lyiRp~v~g~~~~lG~~~~~~~~~~i~~~p~~~~~  222 (403)
T PLN02782        143 ENAIRMRNGAERMCMPAPTVEQFVEAVKETVLANKRWVPPPGKGSLYIRPLLMGSGAVLGLAPAPEYTFLIYVSPVGNYF  222 (403)
T ss_pred             HHHHHHHHHHHHhCcCCCCHHHHHHHHHHHHHhccccCCCCCCccEEEEEEEEecCCCcCcCCCCCcEEEEEEEECcccc
Confidence            99999999999999999999999999999999999999998778999999999988889999888899999999999887


Q ss_pred             C---CceeEEEeeeeeecCCCCCCCCCcccccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCCEEEcc
Q 012487          286 K---GYLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGNVISTP  362 (462)
Q Consensus       286 ~---~~v~l~i~~~~~Ra~p~g~g~~Kt~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~~liTP  362 (462)
                      +   +++++.+++++.|++|++++++|++|||+++++++++|+++||+|+||||..++|+|+|++++|||++++++|+||
T Consensus       223 ~~g~~~v~l~v~~~~~Ra~p~g~g~~Kt~~nY~~~l~a~~eA~~~G~de~L~Ld~~~~g~V~E~~~sNlF~v~~~~l~TP  302 (403)
T PLN02782        223 KEGVAPINLIVENEFHRATPGGTGGVKTIGNYAAVLKAQSIAKAKGYSDVLYLDCVHKKYLEEVSSCNIFIVKDNVISTP  302 (403)
T ss_pred             ccCCccEEEEEeCceeecCCCCCcccchhhhHHHHHHHHHHHHHcCCCEEEEEeCCCCCEEEEcCcEEEEEEECCEEEcC
Confidence            5   5788988877899999999999999999999999999999999999999965579999999999999999999999


Q ss_pred             CCCCCCccchHHHHHHHHHHHcCCcEEEEEeChhhhhccceeEEEecccceEEeEEEEECCeEEEcC-CCchHHHHHHHH
Q 012487          363 ATDGTILPGITRKSVIEIAQILGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGKRIEYK-TGPETVAQKLYE  441 (462)
Q Consensus       363 pLs~~ILpGITR~siLela~~~G~~V~Er~I~~~eL~~adEvF~tgTa~gI~PV~~I~~~~~~i~~~-~~~gp~t~~L~~  441 (462)
                      +++++||+||||++||++|+++|++|+||+|+++||.+|||+|+|||+++|+||++|.|+|+.+.+. +..||++++|++
T Consensus       303 ~l~~~iLpGITR~svlela~~~Gi~V~Er~i~~~eL~~AdEvF~tgTa~~V~PV~~I~~~g~~~~~~~g~~Gpvt~~L~~  382 (403)
T PLN02782        303 AIKGTILPGITRKSIIDVARSQGFQVEERNVTVDELLEADEVFCTGTAVVVSPVGSITYKGKRVSYGEGGFGTVSQQLYT  382 (403)
T ss_pred             CCcCCcCcCHHHHHHHHHHHHcCCeEEEEECCHHHHhhCCEEEEccCcceEEEEEEEEECCEEEeCCCCCcCHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999999999999988663 458999999999


Q ss_pred             HHHHhhccCCCCCCCCeEECC
Q 012487          442 MLVGIQTGRIEDKMGWTVELN  462 (462)
Q Consensus       442 ~l~~iq~G~~~d~~gW~~~v~  462 (462)
                      +|.+||+|+.+|++||+++|+
T Consensus       383 ~l~~iq~G~~~~~~~W~~~v~  403 (403)
T PLN02782        383 VLTSLQMGLIEDNMNWTVELS  403 (403)
T ss_pred             HHHHHhcCCCCCCCCCeEECC
Confidence            999999999999999999986

>PLN02883 Branched-chain amino acid aminotransferase Back     alignment and domain information
>PLN02259 branched-chain-amino-acid aminotransferase 2 Back     alignment and domain information
>KOG0975 consensus Branched chain aminotransferase BCAT1, pyridoxal phosphate enzymes type IV superfamily [Amino acid transport and metabolism] Back     alignment and domain information
>PLN03117 Branched-chain-amino-acid aminotransferase; Provisional Back     alignment and domain information
>PRK13357 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>TIGR01123 ilvE_II branched-chain amino acid aminotransferase, group II Back     alignment and domain information
>TIGR01122 ilvE_I branched-chain amino acid aminotransferase, group I Back     alignment and domain information
>PRK06606 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>COG0115 IlvE Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>cd01557 BCAT_beta_family BCAT_beta_family: Branched-chain aminotransferase catalyses the transamination of the branched-chain amino acids leusine, isoleucine and valine to their respective alpha-keto acids, alpha-ketoisocaproate, alpha-keto-beta-methylvalerate and alpha-ketoisovalerate Back     alignment and domain information
>PRK12479 branched-chain amino acid aminotransferase; Provisional Back     alignment and domain information
>PRK07544 branched-chain amino acid aminotransferase; Validated Back     alignment and domain information
>PRK08320 branched-chain amino acid aminotransferase; Reviewed Back     alignment and domain information
>PRK13356 aminotransferase; Provisional Back     alignment and domain information
>cd01558 D-AAT_like D-Alanine aminotransferase (D-AAT_like): D-amino acid aminotransferase catalyzes transamination between D-amino acids and their respective alpha-keto acids Back     alignment and domain information
>PRK07650 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>PRK06680 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>TIGR01121 D_amino_aminoT D-amino acid aminotransferase Back     alignment and domain information
>PRK12400 D-amino acid aminotransferase; Reviewed Back     alignment and domain information
>PLN02845 Branched-chain-amino-acid aminotransferase-like protein Back     alignment and domain information
>PRK07849 4-amino-4-deoxychorismate lyase; Provisional Back     alignment and domain information
>TIGR03461 pabC_Proteo aminodeoxychorismate lyase Back     alignment and domain information
>PRK06092 4-amino-4-deoxychorismate lyase; Reviewed Back     alignment and domain information
>cd00449 PLPDE_IV PyridoxaL 5'-Phosphate Dependent Enzymes class IV (PLPDE_IV) Back     alignment and domain information
>cd01559 ADCL_like ADCL_like: 4-Amino-4-deoxychorismate lyase: is a member of the fold-type IV of PLP dependent enzymes that converts 4-amino-4-deoxychorismate (ADC) to p-aminobenzoate and pyruvate Back     alignment and domain information
>PRK09266 hypothetical protein; Provisional Back     alignment and domain information
>PF01063 Aminotran_4: Aminotransferase class IV; InterPro: IPR001544 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue Back     alignment and domain information
>PRK07546 hypothetical protein; Provisional Back     alignment and domain information
>PRK07101 hypothetical protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query462
4dqn_A345 Crystal Structure Of The Branched-Chain Aminotransf 3e-60
3uyy_A358 Crystal Structures Of Branched-Chain Aminotransfera 1e-58
3jz6_A373 Crystal Structure Of Mycobacterium Smegmatis Branch 3e-57
3dtf_A372 Structural Analysis Of Mycobacterial Branched Chain 4e-57
3ht5_A368 Crystal Structure Of Ilve A Branched Chain Amino Ac 9e-56
2cog_A386 Crystal Structure Of Oxidized Human Cytosolic Branc 6e-42
2abj_A366 Crystal Structure Of Human Branched Chain Amino Aci 1e-41
2hhf_B365 X-ray Crystal Structure Of Oxidized Human Mitochond 3e-37
2hgw_A365 Crystal Structure Of Cys318ala Mutant Of Human Mito 5e-37
1ekf_A365 Crystallographic Structure Of Human Branched Chain 5e-37
2hdk_A365 Crystal Structure Of Cys315ala-Cys318ala Mutant Of 6e-37
2hg8_A365 Crystal Structure Of Cys315ala Mutant Of Human Mito 6e-37
2hhf_A365 X-ray Crystal Structure Of Oxidized Human Mitochond 2e-36
1a3g_A308 Branched-chain Amino Acid Aminotransferase From Esc 4e-29
1i1k_A309 Crystal Structure Of Eschelichia Coli Branched-chai 4e-29
1wrv_A308 Crystal Structure Of T.Th.Hb8 Branched-Chain Amino 2e-23
3u0g_A328 Crystal Structure Of Branched-Chain Amino Acid Amin 2e-20
3csw_A285 Crystal Structure Of A Putative Branched-Chain Amin 2e-10
3sno_A315 Crystal Structure Of A Hypothetical Aminotransferas 1e-08
3lul_A272 Crystal Structure Of Putative 4-Amino-4-Deoxychoris 2e-08
1daa_A282 Crystallographic Structure Of D-Amino Acid Aminotra 2e-07
3lqs_A280 Complex Structure Of D-Amino Acid Aminotransferase 2e-07
3daa_A277 Crystallographic Structure Of D-Amino Acid Aminotra 2e-07
5daa_A277 E177k Mutant Of D-Amino Acid Aminotransferase Compl 6e-07
1g2w_A282 E177s Mutant Of The Pyridoxal-5'-phosphate Enzyme D 7e-07
1a0g_A282 L201a Mutant Of D-Amino Acid Aminotransferase Compl 8e-07
1et0_A269 Crystal Structure Of Aminodeoxychorismate Lyase Fro 1e-05
2y4r_A292 Crystal Structure Of 4-Amino-4-Deoxychorismate Lyas 2e-05
>pdb|4DQN|A Chain A, Crystal Structure Of The Branched-Chain Aminotransferase From Streptococcus Mutans Length = 345 Back     alignment and structure 
Iteration: 1

 Score =  229 bits (583), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 139/341 (40%), Positives = 196/341 (57%), Gaps = 14/341 (4%)
Query: 132 NLKWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKA 191
           +L W  LGF    + + Y+    K+  +  G LT    L ++ SS  L+YGQ  FEGLKA
Sbjct: 8   DLDWKNLGFEYHKLPFRYI-SYYKDGKWDDGKLTEDATLHISESSPALHYGQEAFEGLKA 66
Query: 192 YRTEDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKG-S 250
           YRT+DG + LFRP  NA R+Q  ADRL MP    ++F+DA K  V AN+++VPP G G +
Sbjct: 67  YRTKDGSVQLFRPNMNAERLQRTADRLLMPQVPTDKFIDAAKQVVRANEEYVPPYGTGAT 126
Query: 251 LYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYHKGYL---NLVVEEKFYRAFPGGTGG 307
           LY+RPLL+G G V+G  PA +Y F  FA PVGNY KG L   N ++++ + RA P GTG 
Sbjct: 127 LYLRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKGGLAPTNFLIQDDYDRAAPHGTGA 186
Query: 308 VKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFL-KGNVISTPATDG 366
            K   NY+    P   A  + FSDV++LD  T   IEEV ++N F + K N   TP +  
Sbjct: 187 AKVGGNYAASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGITKDNEFITPLSP- 245
Query: 367 TILPGITRKSVIEIAQI-LGYQVEERAVAVEELFDSEEVFCTGTAMVVNPVNSITYQGK- 424
           +ILP +T+ S++ +A+   G +  E  V V+EL    E    GTA V++P+  + +    
Sbjct: 246 SILPSVTKYSLLYLAEHRFGMKAIEGDVCVDELDKFVEAGACGTAAVISPIGGVQHGDDF 305
Query: 425 ---RIEYKTGPETVAQKLYEMLVGIQTGRIEDKMGWTVELN 462
                E + GP  V  KLY+ L GIQ G ++   GW  +++
Sbjct: 306 HVFYSETEVGP--VTHKLYDELTGIQFGDVKAPEGWIYKVD 344
>pdb|3UYY|A Chain A, Crystal Structures Of Branched-Chain Aminotransferase From Deinococcus Radiodurans Complexes With Alpha-Ketoisocaproate And L-Glutamate Suggest Its Radio-Resistance For Catalysis Length = 358 Back     alignment and structure
>pdb|3JZ6|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Branched Chain Aminotransferase In Complex With Pyridoxal-5'-Phosphate At 1.9 Angstrom. Length = 373 Back     alignment and structure
>pdb|3DTF|A Chain A, Structural Analysis Of Mycobacterial Branched Chain Aminotransferase- Implications For Inhibitor Design Length = 372 Back     alignment and structure
>pdb|3HT5|A Chain A, Crystal Structure Of Ilve A Branched Chain Amino Acid Transaminase From Mycobacterium Tuberculosis Length = 368 Back     alignment and structure
>pdb|2COG|A Chain A, Crystal Structure Of Oxidized Human Cytosolic Branched-Chain Aminotransferase Complexed With 4-Methylvalerate Length = 386 Back     alignment and structure
>pdb|2ABJ|A Chain A, Crystal Structure Of Human Branched Chain Amino Acid Transaminase In A Complex With An Inhibitor, C16h10n2o4f3scl, And Pyridoxal 5' Phosphate. Length = 366 Back     alignment and structure
>pdb|2HHF|B Chain B, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|2HGW|A Chain A, Crystal Structure Of Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|1EKF|A Chain A, Crystallographic Structure Of Human Branched Chain Amino Acid Aminotransferase (Mitochondrial) Complexed With Pyridoxal-5'- Phosphate At 1.95 Angstroms (Orthorhombic Form) Length = 365 Back     alignment and structure
>pdb|2HDK|A Chain A, Crystal Structure Of Cys315ala-Cys318ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Length = 365 Back     alignment and structure
>pdb|2HG8|A Chain A, Crystal Structure Of Cys315ala Mutant Of Human Mitochondrial Branched Chain Aminotransferase Complexed With Its Substrate Mimic, N-Methyl Leucine. Length = 365 Back     alignment and structure
>pdb|2HHF|A Chain A, X-ray Crystal Structure Of Oxidized Human Mitochondrial Branched Chain Aminotransferase (hbcatm) Length = 365 Back     alignment and structure
>pdb|1A3G|A Chain A, Branched-chain Amino Acid Aminotransferase From Escherichia Coli Length = 308 Back     alignment and structure
>pdb|1I1K|A Chain A, Crystal Structure Of Eschelichia Coli Branched-chain Amino Acid Aminotransferase. Length = 309 Back     alignment and structure
>pdb|1WRV|A Chain A, Crystal Structure Of T.Th.Hb8 Branched-Chain Amino Acid Aminotransferase Length = 308 Back     alignment and structure
>pdb|3U0G|A Chain A, Crystal Structure Of Branched-Chain Amino Acid Aminotransferase From Burkholderia Pseudomallei Length = 328 Back     alignment and structure
>pdb|3CSW|A Chain A, Crystal Structure Of A Putative Branched-Chain Amino Acid Aminotransferase (Tm0831) From Thermotoga Maritima At 2.15 A Resolution Length = 285 Back     alignment and structure
>pdb|3SNO|A Chain A, Crystal Structure Of A Hypothetical Aminotransferase (Ncgl2491) From Corynebacterium Glutamicum Atcc 13032 Kitasato At 1.60 A Resolution Length = 315 Back     alignment and structure
>pdb|3LUL|A Chain A, Crystal Structure Of Putative 4-Amino-4-Deoxychorismate Lyase. (Yp_094631.1) From Legionella Pneumophila Subsp. Pneumophila Str. Philadelphia 1 At 1.78 A Resolution Length = 272 Back     alignment and structure
>pdb|1DAA|A Chain A, Crystallographic Structure Of D-Amino Acid Aminotransferase Complexed With Pyridoxal-5'-Phosphate Length = 282 Back     alignment and structure
>pdb|3LQS|A Chain A, Complex Structure Of D-Amino Acid Aminotransferase And 4-Amino-4,5- Dihydro-Thiophenecarboxylic Acid (Adta) Length = 280 Back     alignment and structure
>pdb|3DAA|A Chain A, Crystallographic Structure Of D-Amino Acid Aminotransferase Inactivated By Pyridoxyl-D-Alanine Length = 277 Back     alignment and structure
>pdb|5DAA|A Chain A, E177k Mutant Of D-Amino Acid Aminotransferase Complexed With Pyridoxamine-5'-Phosphate Length = 277 Back     alignment and structure
>pdb|1G2W|A Chain A, E177s Mutant Of The Pyridoxal-5'-phosphate Enzyme D-amino Acid Aminotransferase Length = 282 Back     alignment and structure
>pdb|1A0G|A Chain A, L201a Mutant Of D-Amino Acid Aminotransferase Complexed With Pyridoxamine-5'-Phosphate Length = 282 Back     alignment and structure
>pdb|1ET0|A Chain A, Crystal Structure Of Aminodeoxychorismate Lyase From Escherichia Coli Length = 269 Back     alignment and structure
>pdb|2Y4R|A Chain A, Crystal Structure Of 4-Amino-4-Deoxychorismate Lyase From Pseudomonas Aeruginosa Length = 292 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query462
3dth_A372 Branched-chain amino acid aminotransferase; open t 1e-157
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 1e-150
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 1e-147
1iye_A309 Branched-chain amino acid aminotransferase; hexame 4e-53
3u0g_A328 Putative branched-chain amino acid aminotransfera; 1e-52
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 3e-52
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 1e-48
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 1e-47
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 4e-47
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 5e-42
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 5e-42
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 5e-41
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 5e-37
3qqm_A221 MLR3007 protein; structural genomics, joint center 8e-27
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 3e-17
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 9e-04
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Length = 386 Back     alignment and structure
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Length = 365 Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Length = 309 Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Length = 328 Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Length = 308 Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Length = 272 Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Length = 285 Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Length = 315 Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Length = 269 Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Length = 246 Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Length = 277 Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Length = 221 Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Length = 194 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query462
3dth_A372 Branched-chain amino acid aminotransferase; open t 100.0
3dtg_A372 Branched-chain amino acid aminotransferase; open t 100.0
3uzo_A358 Branched-chain-amino-acid aminotransferase; BCAT, 100.0
4dqn_A345 Putative branched-chain amino acid aminotransfera; 100.0
2coi_A386 Branched chain aminotransferase 1, cytosolic; PLP- 100.0
2a1h_A365 Branched chain aminotransferase; fold type IV; HET 100.0
3u0g_A328 Putative branched-chain amino acid aminotransfera; 100.0
1iye_A309 Branched-chain amino acid aminotransferase; hexame 100.0
2eiy_A308 ILVE, branched-chain amino acid aminotransferase; 100.0
3daa_A277 D-amino acid aminotransferase; pyridoxal phosphate 100.0
1i2k_A269 4-amino-4-deoxychorismate lyase; pyridoxal phospha 100.0
2xpf_A292 4-amino-4-deoxychorismate lyase; para-aminobenzoic 100.0
3lul_A272 4-amino-4-deoxychorismate lyase; structural genomi 100.0
3sno_A315 Hypothetical aminotransferase; D-aminoacid aminotr 100.0
3csw_A285 BCAT, putative branched-chain-amino-acid aminotran 100.0
2zgi_A246 Putative 4-amino-4-deoxychorismate lyase; TTHA0621 100.0
3qqm_A221 MLR3007 protein; structural genomics, joint center 100.0
3ceb_A194 D-aminoacid aminotransferase-like PLP-dependent E; 100.0
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A* Back     alignment and structure
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A* Back     alignment and structure
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans} Back     alignment and structure
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A* Back     alignment and structure
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A* Back     alignment and structure
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei} Back     alignment and structure
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A* Back     alignment and structure
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A* Back     alignment and structure
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A* Back     alignment and structure
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A* Back     alignment and structure
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila} Back     alignment and structure
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum} Back     alignment and structure
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8} Back     alignment and structure
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus} Back     alignment and structure
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti} Back     alignment and structure
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 462
d2a1ha1363 e.17.1.1 (A:3-365) Branched-chain aminoacid aminot 1e-69
d1iyea_304 e.17.1.1 (A:) Branched-chain aminoacid aminotransf 3e-50
d1daaa_277 e.17.1.1 (A:) D-aminoacid aminotransferase {Bacill 6e-27
d1i2ka_269 e.17.1.1 (A:) Aminodeoxychorismate lyase {Escheric 9e-21
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 363 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  223 bits (569), Expect = 1e-69
 Identities = 98/343 (28%), Positives = 164/343 (47%), Gaps = 20/343 (5%)

Query: 135 WDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRT 194
            + L F     D+M +++   +K +    +  F  L ++P+S  L+Y   +FEG+KA++ 
Sbjct: 23  GEPLVFGKTFTDHMLMVEW-NDKGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKG 81

Query: 195 EDGRILLFRPEQNALRMQMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKGSLYIR 254
           +D ++ LFRP  N  RM   A RL +PS    + ++ ++  +  +K WVP     SLY+R
Sbjct: 82  KDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVR 141

Query: 255 PLLMGSGPVLGATPAPDYTFLAFASPVGNYHKGY----LNLVVEEKFYRAFPGGTGGVKA 310
           P+L+G+ P LG +            PVG Y  G     ++L+ +  F RA+ GG G  K 
Sbjct: 142 PVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKL 201

Query: 311 IVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGN----VISTPATDG 366
             NY        EA  +G   VL+L     +  E  + +   +         + TP  +G
Sbjct: 202 GGNYGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVYWTHEDGVLELVTPPLNG 261

Query: 367 TILPGITRKSVIEIAQILG-YQVEERAVAVEELFDS------EEVFCTGTAMVVNPVNSI 419
            ILPG+ R+S++++AQ  G ++V ER + +++L  +       EVF +GTA  V PV+ I
Sbjct: 262 VILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRI 321

Query: 420 TYQGKRIEYKTGPE--TVAQKLYEMLVGIQTGRIEDKMGWTVE 460
            Y+ + +   T      +  +  + L  IQ G       W   
Sbjct: 322 LYKDRNLHIPTMENGPELILRFQKELKEIQYGIRAH--EWMFP 362
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Length = 304 Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Length = 277 Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Length = 269 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query462
d2a1ha1363 Branched-chain aminoacid aminotransferase {Human ( 100.0
d1iyea_304 Branched-chain aminoacid aminotransferase {Escheri 100.0
d1daaa_277 D-aminoacid aminotransferase {Bacillus sp., strain 100.0
d1i2ka_269 Aminodeoxychorismate lyase {Escherichia coli [TaxI 100.0
>d2a1ha1 e.17.1.1 (A:3-365) Branched-chain aminoacid aminotransferase {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: D-aminoacid aminotransferase-like PLP-dependent enzymes
superfamily: D-aminoacid aminotransferase-like PLP-dependent enzymes
family: D-aminoacid aminotransferase-like PLP-dependent enzymes
domain: Branched-chain aminoacid aminotransferase
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=8.9e-76  Score=600.00  Aligned_cols=326  Identities=31%  Similarity=0.524  Sum_probs=302.3

Q ss_pred             CCCCCCCCccceeeCceEEEEEccCceeecCeeccCCcceeCCCCccccccceEEEEEEEEEeCCCeEeecChHhHHHHH
Q 012487          132 NLKWDELGFCLIPVDYMYVMKCSKEKNFSHGILTRFGRLEMNPSSGILNYGQGVFEGLKAYRTEDGRILLFRPEQNALRM  211 (462)
Q Consensus       132 ~~d~~~l~fg~~~tdhm~~~~~~~~~~W~ng~ivp~~~~~l~~~d~~l~YG~gvFEgmkay~~~dG~i~lFr~d~Hl~RL  211 (462)
                      ..+.++|+||++|||||++++|.+ ++|.||+|+|++++.|||+|++||||||||||||+|+++||++++|||++|++||
T Consensus        20 ~~~~~~~~f~~~~~d~m~~~~~~~-~~W~ng~ivp~~~~~isp~~~~l~YG~gvFEgiR~y~~~~g~i~lFrld~Hl~RL   98 (363)
T d2a1ha1          20 PGPGEPLVFGKTFTDHMLMVEWND-KGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRM   98 (363)
T ss_dssp             CCTTSCCCTTCSCCSEEEEEEEET-TEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHH
T ss_pred             CCCcccCCCCCcccceEEEEEecC-CeeeCCEEeEcccceeCcchhhccccceeeeeEEEEECCCCCEEEEccHHHHHHH
Confidence            346799999999999999999996 6899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCcceEEEEEEeccCCcccccCCCCcEEEEEEeccCCCCC----C
Q 012487          212 QMGADRLRMPSPTIEQFVDAVKHTVVANKQWVPPPGKGSLYIRPLLMGSGPVLGATPAPDYTFLAFASPVGNYHK----G  287 (462)
Q Consensus       212 ~~SA~~L~mp~~~~e~l~~~I~~lv~~n~~~vP~~~~g~lyIRp~~~g~~~~lGv~p~~~~~~~I~~~P~~~y~~----~  287 (462)
                      .+||++|+|+.++.+++.++|.++|+.|..|+|....+.+||||+++++++.+|+.++..+.+++++.|...++.    +
T Consensus        99 ~~Sa~~l~~~~~~~~~~~~~i~~~v~~n~~~v~~~~~~~~yiR~~v~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~  178 (363)
T d2a1ha1          99 LRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVT  178 (363)
T ss_dssp             HHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEEEEEEEEEECCSSSSSSCC
T ss_pred             HHHHHHhCCCCCChHHHHHHHHHHHHHHHhhccccccccEEEEEeeccCCccccccCCcccceeEEEeeccccCcccccc
Confidence            999999999988999999999999999999999877789999999999888899999888888888888877764    5


Q ss_pred             ceeEEEeeeeeecCCCCCCCCCcccccccchHHHHHHHHCCCCeEEEEeccCCCEEEeeCceeEEEEeCC-----EEEcc
Q 012487          288 YLNLVVEEKFYRAFPGGTGGVKAIVNYSTVFKPVAEAKAKGFSDVLFLDVKTAKYIEEVSTSNIFFLKGN-----VISTP  362 (462)
Q Consensus       288 ~v~l~i~~~~~Ra~p~g~g~~Kt~gNYa~~l~a~~eA~~~G~ddvL~LD~~~~g~V~E~stsNiF~v~~~-----~liTP  362 (462)
                      +..+.+.+.+.|.+|.+++.+|.++||+++++|..+|+++||+|+||||.. +|+|+|++++|+|+++++     +++||
T Consensus       179 ~~~~~~~~~~~r~~~~~~~~~k~~~ny~~~~la~~eA~~~G~de~l~L~~~-dg~v~E~~~sNiF~v~~~kdG~~~l~tp  257 (363)
T d2a1ha1         179 PVSLLADPAFIRAWVGGVGNYKLGGNYGPTVLVQQEALKRGCEQVLWLYGP-DHQLTEVGTMNIFVYWTHEDGVLELVTP  257 (363)
T ss_dssp             CEEEEECTTCCSCCTTSSTTSCBGGGTTTHHHHHHHHHHTTCSEEEEEETT-TTEEEEETTEEEEEEEECTTSCEEEEEC
T ss_pred             ceeEEEeeeccccCccccccccccccccchhhHHHHhhcCCceeeeecccc-cceEEeccceEEEEEEecCCCcEEEEec
Confidence            677878777899999999999999999999999999999999999999863 799999999999999765     69999


Q ss_pred             CCCCCCccchHHHHHHHHHHHcC-CcEEEEEeChhhhhcc------ceeEEEecccceEEeEEEEECCeEEEcC-CCch-
Q 012487          363 ATDGTILPGITRKSVIEIAQILG-YQVEERAVAVEELFDS------EEVFCTGTAMVVNPVNSITYQGKRIEYK-TGPE-  433 (462)
Q Consensus       363 pLs~~ILpGITR~siLela~~~G-~~V~Er~I~~~eL~~a------dEvF~tgTa~gI~PV~~I~~~~~~i~~~-~~~g-  433 (462)
                      |++++|||||||++||++|+++| ++|+||+|+++||.+|      ||||+|||+.+|+||.+|+++++.+.+. +.+| 
T Consensus       258 pl~~~ILpGITR~~Viela~~~g~i~V~Er~i~~~eL~~A~~~~~~dEvF~tgTa~~I~PV~~I~~~~~~~~i~~g~~g~  337 (363)
T d2a1ha1         258 PLNGVILPGVVRQSLLDMAQTWGEFRVVERTITMKQLLRALEEGRVREVFGSGTACQVCPVHRILYKDRNLHIPTMENGP  337 (363)
T ss_dssp             CCSSSSCCCHHHHHHHHHHHHHTSSEEEECCCBHHHHHHHHHTTCEEEEEEEETTTEEEEEEEEEETTEEEECTTGGGTT
T ss_pred             cccccccCchHHHHHHHHHHHcCCCceeecCCCHHHHHhHhhcCCccEEEEcCCCcEEEEEEEEEeCCceEEeCCCCcCH
Confidence            99999999999999999999997 9999999999999999      9999999999999999999988887664 3466 


Q ss_pred             HHHHHHHHHHHHhhccCCCCCCCCeEEC
Q 012487          434 TVAQKLYEMLVGIQTGRIEDKMGWTVEL  461 (462)
Q Consensus       434 p~t~~L~~~l~~iq~G~~~d~~gW~~~v  461 (462)
                      ++|++|+++|.+||+|+++|  ||+++|
T Consensus       338 ~it~~L~~~l~~iq~G~~~~--~W~~~v  363 (363)
T d2a1ha1         338 ELILRFQKELKEIQYGIRAH--EWMFPV  363 (363)
T ss_dssp             HHHHHHHHHHHHHHTTSSCC--TTEEEC
T ss_pred             HHHHHHHHHHHHHhCCCCCC--CCeeEC
Confidence            59999999999999998775  999987
>d1iyea_ e.17.1.1 (A:) Branched-chain aminoacid aminotransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1daaa_ e.17.1.1 (A:) D-aminoacid aminotransferase {Bacillus sp., strain YM-1 [TaxId: 1409]} Back     information, alignment and structure
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure