Citrus Sinensis ID: 012516

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460--
MGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKDSFPKGGK
cccccccccccccHHHHHHHHHHHHHHcccEEEEcccHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccEEEEEccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccEEEEEEccccccEEEEHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccEEEEEccEEEEEEEcccccEEEEEEcccccccccccccEEEEccccEEEEEcccccccccccccccccccEEEEcccEEEEEEEEEEccccccEEEEEEEEEccccccccEEEEcccccccccccEEEEEEccccccccccccccccccccccccccEEcccEEEccccccccccccEEEEEEEEEEEcccccccccEEEEEEEcccccccccc
cccccccEEEccHHHHHHHHHHHHHHHccccEEccccHHHHHHHcccccccccccccHHHHHHHHHHHHccccccccEEEEEEEEcccccccccccEEEEEEEcccccccccEEEEccccccHcHHHHHHcccccHHHHHHHcccHHHHHHHHHcccccccEEEEEHEccEEEHHcHHHHHHHHHcccccccccccccHHHHHHHccccHHHHHHHHHHHccccccccEcHHHHHHHHHHHHHHccccEEEEEcccEEEEEccccccEEEEEEccccccccccccccEEEcccEEEEEEHHHHccccccccEEEccccEEEEEEEEEEEEEEEEEEcccccEEEEEEEEccccccEEEEEEEEEcccccccccccHHEEHHHHHcccccccccHHHHHHccccccEEEcccEEcccHHHccccccEEEEEEEEEEEccccccccEEEEEEEEccccHHHccc
mgwepfkityTSDYFQELYELAVELIRRGhayvdhqtpEEIKEYREKKmnspwrdrpiaESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRikftphphagdkwciypsydyahcIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNkyvdgwddpclmtlaglrrrgvtstSINAFVQGigisrsdslIRLDRLEYHIREELnktaprtmvVLNPLKVVITNMesgtimhldakrwpdaqaddasafykvpfsnvvyiehsdfrmkdskdyyglapgksvLLRYAFPIKCTEVILSDDKETILHIRaeydpskktkpkgvlhwvaepspgvnplRVEVRLFEKlfnsenpaelddwlsdlnpdskvvipeayaepslhsaavgdrfqferlgyfavdkdstpeklvfnrtvtlkdsfpkggk
mgwepfkitYTSDYFQELYELAVELIRRGHayvdhqtpeeikeyrekkmnspwrdrpIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTnkyvdgwddPCLMTLAGLRRRGVTSTSinafvqgigisrsdsliRLDRLEYHIReelnktaprtmvvLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRaeydpskktkpKGVLHWvaepspgvnpLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFavdkdstpeklvfnrtvtlkdsfpkggk
MGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKDSFPKGGK
***EPFKITYTSDYFQELYELAVELIRRGHAYVDH*****************************************************DNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYD*******KGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNRTV***********
MGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTP***************RDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKD**P****
MGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKDSFPKGGK
MGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKDSF*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiii
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKDSFPKGGK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query462 2.2.26 [Sep-21-2011]
P52780794 Glutamine--tRNA ligase OS N/A no 1.0 0.581 0.848 0.0
P14325779 Probable glutamine--tRNA yes no 0.976 0.578 0.531 1e-137
Q324M4554 Glutamine--tRNA ligase OS yes no 0.961 0.801 0.475 1e-113
B5YQM4554 Glutamine--tRNA ligase OS yes no 0.961 0.801 0.475 1e-113
Q8X9H8554 Glutamine--tRNA ligase OS N/A no 0.961 0.801 0.475 1e-113
Q3MHH4775 Glutamine--tRNA ligase OS yes no 0.950 0.566 0.482 1e-113
B7LKT3554 Glutamine--tRNA ligase OS yes no 0.961 0.801 0.473 1e-113
B1LLC4554 Glutamine--tRNA ligase OS yes no 0.961 0.801 0.473 1e-113
B7N9S6554 Glutamine--tRNA ligase OS yes no 0.961 0.801 0.473 1e-113
Q1REN7554 Glutamine--tRNA ligase OS yes no 0.961 0.801 0.473 1e-113
>sp|P52780|SYQ_LUPLU Glutamine--tRNA ligase OS=Lupinus luteus PE=2 SV=2 Back     alignment and function desciption
 Score =  835 bits (2157), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/463 (84%), Positives = 432/463 (93%), Gaps = 1/463 (0%)

Query: 1   MGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAE 60
           MGWEPFKITYTS+YFQELYE AVELIRRGHAYVDHQT +EIKEYREKK+NSPWRDRPI+E
Sbjct: 332 MGWEPFKITYTSNYFQELYEFAVELIRRGHAYVDHQTADEIKEYREKKLNSPWRDRPISE 391

Query: 61  SLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYD 120
           SLKLFEDMR G IEEGKATLRMKQDMQ+DN+NMYDLIAYRIKFTPHPHAGDKWCIYPSYD
Sbjct: 392 SLKLFEDMRRGFIEEGKATLRMKQDMQSDNYNMYDLIAYRIKFTPHPHAGDKWCIYPSYD 451

Query: 121 YAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKL 180
           YAHCIVDSIEN+THSLCTLEFETRRASY+WLLHALG+YQPYVWEYSRLNVSNTVMSKRKL
Sbjct: 452 YAHCIVDSIENVTHSLCTLEFETRRASYYWLLHALGIYQPYVWEYSRLNVSNTVMSKRKL 511

Query: 181 NFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSD-SLIRLDRLEYHIR 239
           N LVT K+VDGWDDP LMTLAGLRRRG+T T+INAFV+G+GI+RSD +LI ++RLEYH+R
Sbjct: 512 NRLVTEKWVDGWDDPRLMTLAGLRRRGMTPTAINAFVRGMGITRSDGTLISVERLEYHVR 571

Query: 240 EELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIE 299
           EELNKTAPR MVVL+PLKVVITN+E+ + + +DAK+WPDAQADDASAFYK+PFSNVVYIE
Sbjct: 572 EELNKTAPRAMVVLHPLKVVITNLEAKSAIEVDAKKWPDAQADDASAFYKIPFSNVVYIE 631

Query: 300 HSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKG 359
            SDFRM+DSKDYYGLAPGKSV+LRYAFPIKCTEVIL+DD ETIL IRAEYDPSKKTKPKG
Sbjct: 632 RSDFRMQDSKDYYGLAPGKSVILRYAFPIKCTEVILADDNETILEIRAEYDPSKKTKPKG 691

Query: 360 VLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHS 419
           VLHWV++PSPGV+PL+VEVRLFE+LF SENPAELD+WL DLNP SKV I  AY    L  
Sbjct: 692 VLHWVSQPSPGVDPLKVEVRLFERLFLSENPAELDNWLGDLNPHSKVEISNAYGVSLLKD 751

Query: 420 AAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKDSFPKGGK 462
           A +GDRFQFERLGYFAVD+DSTPEKLVFNRTVTLKDS+ KGGK
Sbjct: 752 AKLGDRFQFERLGYFAVDQDSTPEKLVFNRTVTLKDSYGKGGK 794

Lupinus luteus (taxid: 3873)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 8
>sp|P14325|SYQ_DICDI Probable glutamine--tRNA ligase OS=Dictyostelium discoideum GN=glnS PE=2 SV=2 Back     alignment and function description
>sp|Q324M4|SYQ_SHIBS Glutamine--tRNA ligase OS=Shigella boydii serotype 4 (strain Sb227) GN=glnS PE=3 SV=1 Back     alignment and function description
>sp|B5YQM4|SYQ_ECO5E Glutamine--tRNA ligase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=glnS PE=3 SV=1 Back     alignment and function description
>sp|Q8X9H8|SYQ_ECO57 Glutamine--tRNA ligase OS=Escherichia coli O157:H7 GN=glnS PE=3 SV=3 Back     alignment and function description
>sp|Q3MHH4|SYQ_BOVIN Glutamine--tRNA ligase OS=Bos taurus GN=QARS PE=2 SV=1 Back     alignment and function description
>sp|B7LKT3|SYQ_ESCF3 Glutamine--tRNA ligase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=glnS PE=3 SV=1 Back     alignment and function description
>sp|B1LLC4|SYQ_ECOSM Glutamine--tRNA ligase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=glnS PE=3 SV=1 Back     alignment and function description
>sp|B7N9S6|SYQ_ECOLU Glutamine--tRNA ligase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=glnS PE=3 SV=1 Back     alignment and function description
>sp|Q1REN7|SYQ_ECOUT Glutamine--tRNA ligase OS=Escherichia coli (strain UTI89 / UPEC) GN=glnS PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query462
255572104 793 glutaminyl-tRNA synthetase, putative [Ri 1.0 0.582 0.874 0.0
225453336 790 PREDICTED: glutaminyl-tRNA synthetase [V 1.0 0.584 0.868 0.0
359472944 802 PREDICTED: glutaminyl-tRNA synthetase is 1.0 0.576 0.859 0.0
225424021 791 PREDICTED: glutaminyl-tRNA synthetase is 1.0 0.584 0.859 0.0
356536304 801 PREDICTED: glutaminyl-tRNA synthetase-li 1.0 0.576 0.842 0.0
356536302 794 PREDICTED: glutaminyl-tRNA synthetase-li 1.0 0.581 0.842 0.0
3915866 794 RecName: Full=Glutamine--tRNA ligase; Al 1.0 0.581 0.848 0.0
449462224 794 PREDICTED: glutamine--tRNA ligase-like [ 0.989 0.575 0.858 0.0
449515581 794 PREDICTED: LOW QUALITY PROTEIN: glutamin 0.989 0.575 0.858 0.0
449458640 793 PREDICTED: glutamine--tRNA ligase-like [ 0.989 0.576 0.842 0.0
>gi|255572104|ref|XP_002526992.1| glutaminyl-tRNA synthetase, putative [Ricinus communis] gi|223533627|gb|EEF35364.1| glutaminyl-tRNA synthetase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  862 bits (2228), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/463 (87%), Positives = 441/463 (95%), Gaps = 1/463 (0%)

Query: 1   MGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAE 60
           MGW+PFKITYTSDYFQ+LY+LAVELIRRGHAYVDHQTP+EIKEYREKKMNSPWRDRPIAE
Sbjct: 331 MGWKPFKITYTSDYFQDLYDLAVELIRRGHAYVDHQTPDEIKEYREKKMNSPWRDRPIAE 390

Query: 61  SLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYD 120
           SLKLF++MR G IEEGKATLRMKQDMQ+DNFNMYDLIAYRIKFTPHPH+GDKWCIYPSYD
Sbjct: 391 SLKLFDEMRQGMIEEGKATLRMKQDMQSDNFNMYDLIAYRIKFTPHPHSGDKWCIYPSYD 450

Query: 121 YAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKL 180
           YAHCIVDS+ENITHSLCTLEFETRRASY+WLLHALG+YQPYVWEYSRLNV+NTVMSKRKL
Sbjct: 451 YAHCIVDSLENITHSLCTLEFETRRASYYWLLHALGVYQPYVWEYSRLNVANTVMSKRKL 510

Query: 181 NFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDS-LIRLDRLEYHIR 239
           NFLVT  YVDGWDDP LMTLAGLRRRGVT+T+INAFV+GIGI+RSDS LIRLDRLE+HIR
Sbjct: 511 NFLVTKNYVDGWDDPRLMTLAGLRRRGVTATAINAFVRGIGITRSDSTLIRLDRLEHHIR 570

Query: 240 EELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIE 299
           EELN+TAPRTMVVL+PLKVVITN+E G+IM L+AK+WPDAQ DDASAFYKVPFSNVVYIE
Sbjct: 571 EELNRTAPRTMVVLHPLKVVITNLEPGSIMDLEAKKWPDAQTDDASAFYKVPFSNVVYIE 630

Query: 300 HSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKG 359
           +SDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEV+L+DD ETI+ IRAEYDPSKKTKPKG
Sbjct: 631 NSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVVLADDNETIIEIRAEYDPSKKTKPKG 690

Query: 360 VLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHS 419
           VLHWVAE SPGV+PL+VEVRLFEKLFNSENPAELDDWL+DLNP SKVV+  AYA P L +
Sbjct: 691 VLHWVAESSPGVDPLKVEVRLFEKLFNSENPAELDDWLADLNPQSKVVMSSAYAVPLLKN 750

Query: 420 AAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKDSFPKGGK 462
           A +G+ FQFERLGYF VDKDSTPEKLVFNRTVTL+DS+ KGGK
Sbjct: 751 ATIGESFQFERLGYFTVDKDSTPEKLVFNRTVTLRDSYGKGGK 793

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225453336|ref|XP_002270305.1| PREDICTED: glutaminyl-tRNA synthetase [Vitis vinifera] gi|297734636|emb|CBI16687.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359472944|ref|XP_003631220.1| PREDICTED: glutaminyl-tRNA synthetase isoform 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|225424021|ref|XP_002283636.1| PREDICTED: glutaminyl-tRNA synthetase isoform 1 [Vitis vinifera] gi|297737799|emb|CBI27000.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356536304|ref|XP_003536679.1| PREDICTED: glutaminyl-tRNA synthetase-like isoform 2 [Glycine max] Back     alignment and taxonomy information
>gi|356536302|ref|XP_003536678.1| PREDICTED: glutaminyl-tRNA synthetase-like isoform 1 [Glycine max] Back     alignment and taxonomy information
>gi|3915866|sp|P52780.2|SYQ_LUPLU RecName: Full=Glutamine--tRNA ligase; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS gi|2995455|emb|CAA62901.1| tRNA-glutamine synthetase [Lupinus luteus] Back     alignment and taxonomy information
>gi|449462224|ref|XP_004148841.1| PREDICTED: glutamine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449515581|ref|XP_004164827.1| PREDICTED: LOW QUALITY PROTEIN: glutamine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449458640|ref|XP_004147055.1| PREDICTED: glutamine--tRNA ligase-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query462
DICTYBASE|DDB_G0289481779 glnS "glutamine-tRNA ligase" [ 0.976 0.578 0.531 3.3e-127
ZFIN|ZDB-GENE-040426-1011797 qars "glutaminyl-tRNA syntheta 0.954 0.553 0.510 1.7e-114
RGD|1359448775 Qars "glutaminyl-tRNA syntheta 0.952 0.567 0.485 2.2e-105
UNIPROTKB|P00962554 glnS "glutaminyl-tRNA syntheta 0.961 0.801 0.473 4.6e-105
UNIPROTKB|E2QRQ8775 QARS "Uncharacterized protein" 0.950 0.566 0.476 5.8e-105
UNIPROTKB|Q3MHH4775 QARS "Glutamine--tRNA ligase" 0.950 0.566 0.482 7.5e-105
FB|FBgn0027090778 Aats-gln "Glutaminyl-tRNA synt 0.961 0.570 0.453 3.2e-104
UNIPROTKB|B4DWJ2764 QARS "cDNA FLJ54314, highly si 0.950 0.574 0.478 1.1e-103
UNIPROTKB|P47897775 QARS "Glutamine--tRNA ligase" 0.950 0.566 0.478 1.1e-103
UNIPROTKB|Q9KTA6556 glnS "Glutamine--tRNA ligase" 0.958 0.796 0.473 3.7e-103
DICTYBASE|DDB_G0289481 glnS "glutamine-tRNA ligase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
 Score = 1249 (444.7 bits), Expect = 3.3e-127, P = 3.3e-127
 Identities = 245/461 (53%), Positives = 327/461 (70%)

Query:     1 MGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAE 60
             +G EP +ITY+S  F  LYE+A ELIRRG+AYV HQT  EI E REK  +SP+R+R + E
Sbjct:   322 LGHEPCEITYSSSQFDTLYEMANELIRRGYAYVCHQTASEISEGREKMTDSPYRNRTVEE 381

Query:    61 SLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYD 120
             +LKLFEDMR G+ EEGKA LRMK DM++ N  M DLIAYRIK+  HP +GDKWCIYPSYD
Sbjct:   382 NLKLFEDMRLGKFEEGKAILRMKGDMKHPNPCMRDLIAYRIKYHHHPMSGDKWCIYPSYD 441

Query:   121 YAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKL 180
             Y HC+VDSIENITHSLCTLEFE RR +Y WL+  LGLY+P VWEY+RLN+++TV+SKRK+
Sbjct:   442 YTHCLVDSIENITHSLCTLEFEIRRLTYNWLIDVLGLYRPVVWEYARLNLTHTVLSKRKI 501

Query:   181 NFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSD-SLIRLDRLEYHIR 239
               LV NK V+GWDDP L TL   RR+G T  +IN     IG++R++ + I  + LE   R
Sbjct:   502 ITLVQNKIVNGWDDPRLSTLNAFRRKGYTPEAINLLCDTIGVTRTNGTTISYELLELCCR 561

Query:   240 EELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIE 299
             ++L+  A R M V +P+KVVITN        ++A   P+  +      +K+ FS +VYIE
Sbjct:   562 QDLDGKATRAMAVFDPIKVVITNYPEDKSEEINA---PNIPSKPEKGTHKIDFSRIVYIE 618

Query:   300 HSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVIL-SDDKETILHIRAEYDPSKKTKPK 358
              SDFRM+D+KD++GLAPGK +LL+YA+ IKC +VI  +D K T LH+   YD    +K  
Sbjct:   619 RSDFRMEDNKDFFGLAPGKEILLKYAYNIKCEKVIQDADGKVTELHVT--YDKDNSSKKL 676

Query:   359 GVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLH 418
               +HWV+  + G  P++ EVRL+E LF        DDWL+++NP+S  +IP A+ + ++ 
Sbjct:   677 KTIHWVSSVA-GTEPMKAEVRLYEHLFKDSEIG--DDWLNNINPNSLRIIPNAFIDKTVL 733

Query:   419 SAAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKDSFPK 459
             ++   DR+QFER+GYF VDKD+T +K+VFNRTV+LK++  K
Sbjct:   734 ASKEYDRYQFERVGYFVVDKDTTSDKMVFNRTVSLKENKEK 774
GO:0043039 "tRNA aminoacylation" evidence=IEA
GO:0016876 "ligase activity, forming aminoacyl-tRNA and related compounds" evidence=IEA
GO:0006425 "glutaminyl-tRNA aminoacylation" evidence=IEA;ISS
GO:0006418 "tRNA aminoacylation for protein translation" evidence=IEA
GO:0006412 "translation" evidence=IEA
GO:0005737 "cytoplasm" evidence=IEA;ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0004819 "glutamine-tRNA ligase activity" evidence=IEA;ISS
GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA
GO:0000166 "nucleotide binding" evidence=IEA
GO:0016874 "ligase activity" evidence=IEA
ZFIN|ZDB-GENE-040426-1011 qars "glutaminyl-tRNA synthetase" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
RGD|1359448 Qars "glutaminyl-tRNA synthetase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P00962 glnS "glutaminyl-tRNA synthetase" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
UNIPROTKB|E2QRQ8 QARS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|Q3MHH4 QARS "Glutamine--tRNA ligase" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
FB|FBgn0027090 Aats-gln "Glutaminyl-tRNA synthetase" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|B4DWJ2 QARS "cDNA FLJ54314, highly similar to Glutaminyl-tRNA synthetase (EC 6.1.1.18)" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|P47897 QARS "Glutamine--tRNA ligase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KTA6 glnS "Glutamine--tRNA ligase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
B2TU51SYQ_SHIB36, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
B7M5J8SYQ_ECO8A6, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
B5YQM4SYQ_ECO5E6, ., 1, ., 1, ., 1, 80.47540.96100.8014yesno
B1IY48SYQ_ECOLC6, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
Q8FJW4SYQ_ECOL66, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
B5QWD0SYQ_SALEP6, ., 1, ., 1, ., 1, 80.47220.96530.8036yesno
B5EZC3SYQ_SALA46, ., 1, ., 1, ., 1, 80.47220.96530.8036yesno
B7L9L7SYQ_ECO556, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
Q32IQ0SYQ_SHIDS6, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
Q0T6S8SYQ_SHIF86, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
A1A8U7SYQ_ECOK16, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
B5FNC1SYQ_SALDC6, ., 1, ., 1, ., 1, 80.47220.96530.8036yesno
Q8ZQX5SYQ_SALTY6, ., 1, ., 1, ., 1, 80.47220.96530.8036yesno
Q1REN7SYQ_ECOUT6, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
B7UKW1SYQ_ECO276, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
B5R651SYQ_SALG26, ., 1, ., 1, ., 1, 80.47220.96530.8036yesno
B4TQ00SYQ_SALSV6, ., 1, ., 1, ., 1, 80.47220.96530.8036yesno
B5BCC3SYQ_SALPK6, ., 1, ., 1, ., 1, 80.47220.96530.8036yesno
A7ZXU0SYQ_ECOHS6, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
Q3Z4C0SYQ_SHISS6, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
B7MFU7SYQ_ECO456, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
B7MPI5SYQ_ECO816, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
B7NMN1SYQ_ECO7I6, ., 1, ., 1, ., 1, 80.47120.96100.8014yesno
B7N9S6SYQ_ECOLU6, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
B4SYN9SYQ_SALNS6, ., 1, ., 1, ., 1, 80.47220.96530.8036yesno
B1LLC4SYQ_ECOSM6, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
B6HYN9SYQ_ECOSE6, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
Q57RP8SYQ_SALCH6, ., 1, ., 1, ., 1, 80.47220.96530.8036yesno
A7ZJ63SYQ_ECO246, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
C4ZWF6SYQ_ECOBW6, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
B1X6L3SYQ_ECODH6, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
Q0TK03SYQ_ECOL56, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
A7MQT2SYQ_CROS86, ., 1, ., 1, ., 1, 80.46790.96530.8036yesno
C0PWA7SYQ_SALPC6, ., 1, ., 1, ., 1, 80.47220.96530.8036yesno
Q5PCH8SYQ_SALPA6, ., 1, ., 1, ., 1, 80.47220.96530.8036yesno
B4TB84SYQ_SALHS6, ., 1, ., 1, ., 1, 80.47220.96530.8036yesno
A8AJD6SYQ_CITK86, ., 1, ., 1, ., 1, 80.46790.96530.8036yesno
Q324M4SYQ_SHIBS6, ., 1, ., 1, ., 1, 80.47540.96100.8014yesno
B7LKT3SYQ_ESCF36, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
Q83LY4SYQ_SHIFL6, ., 1, ., 1, ., 1, 80.47330.96100.8014yesno
A9MUG5SYQ_SALPB6, ., 1, ., 1, ., 1, 80.47220.96530.8036yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
4th Layer6.1.1.180.914
3rd Layer6.1.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query462
PLN02859788 PLN02859, PLN02859, glutamine-tRNA ligase 0.0
PRK05347554 PRK05347, PRK05347, glutaminyl-tRNA synthetase; Pr 0.0
TIGR00440522 TIGR00440, glnS, glutaminyl-tRNA synthetase 1e-167
PRK14703 771 PRK14703, PRK14703, glutaminyl-tRNA synthetase/Yqe 1e-166
PTZ00437574 PTZ00437, PTZ00437, glutaminyl-tRNA synthetase; Pr 1e-158
pfam00749314 pfam00749, tRNA-synt_1c, tRNA synthetases class I 1e-102
cd00807238 cd00807, GlnRS_core, catalytic core domain of glut 1e-80
COG0008472 COG0008, GlnS, Glutamyl- and glutaminyl-tRNA synth 2e-74
PLN02907722 PLN02907, PLN02907, glutamate-tRNA ligase 6e-72
PTZ00402601 PTZ00402, PTZ00402, glutamyl-tRNA synthetase; Prov 7e-71
PRK04156567 PRK04156, gltX, glutamyl-tRNA synthetase; Provisio 6e-64
TIGR00463556 TIGR00463, gltX_arch, glutamyl-tRNA synthetase, ar 2e-63
PLN03233523 PLN03233, PLN03233, putative glutamate-tRNA ligase 2e-62
pfam03950174 pfam03950, tRNA-synt_1c_C, tRNA synthetases class 1e-54
cd09287240 cd09287, GluRS_non_core, catalytic core domain of 3e-19
cd00418230 cd00418, GlxRS_core, catalytic core domain of glut 9e-18
cd00807238 cd00807, GlnRS_core, catalytic core domain of glut 4e-14
PRK01406476 PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed 7e-04
>gnl|CDD|178450 PLN02859, PLN02859, glutamine-tRNA ligase Back     alignment and domain information 
 Score = 1011 bits (2616), Expect = 0.0
 Identities = 408/463 (88%), Positives = 432/463 (93%), Gaps = 1/463 (0%)

Query: 1   MGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIAE 60
           MGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPI E
Sbjct: 326 MGWEPFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYREKKMNSPWRDRPIEE 385

Query: 61  SLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYD 120
           SLKLFEDMR G IEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYD
Sbjct: 386 SLKLFEDMRRGLIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYD 445

Query: 121 YAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGLYQPYVWEYSRLNVSNTVMSKRKL 180
           YAHCIVDS+ENITHSLCTLEFETRRASY+WLL +LGLYQPYVWEYSRLNV+NTVMSKRKL
Sbjct: 446 YAHCIVDSLENITHSLCTLEFETRRASYYWLLDSLGLYQPYVWEYSRLNVTNTVMSKRKL 505

Query: 181 NFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSD-SLIRLDRLEYHIR 239
           N LVT KYVDGWDDP L+TLAGLRRRGVT T+INAF +GIGI+RSD SLIR+DRLE+HIR
Sbjct: 506 NRLVTEKYVDGWDDPRLLTLAGLRRRGVTPTAINAFCRGIGITRSDNSLIRMDRLEHHIR 565

Query: 240 EELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIE 299
           EELNKTAPRTMVVL+PLKVVITN+ESG ++ LDAKRWPDAQ DD SAFYKVPFS VVYIE
Sbjct: 566 EELNKTAPRTMVVLHPLKVVITNLESGEVIELDAKRWPDAQNDDPSAFYKVPFSRVVYIE 625

Query: 300 HSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTKPKG 359
            SDFR+KDSKDYYGLAPGKSVLLRYAFPIKCT+V+L+DD ET++ IRAEYDP KKTKPKG
Sbjct: 626 RSDFRLKDSKDYYGLAPGKSVLLRYAFPIKCTDVVLADDNETVVEIRAEYDPEKKTKPKG 685

Query: 360 VLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLHS 419
           VLHWVAEPSPGV PL+VEVRLF+KLF SENPAEL+DWL DLNP SK VI  AYA PSL  
Sbjct: 686 VLHWVAEPSPGVEPLKVEVRLFDKLFLSENPAELEDWLEDLNPQSKEVISGAYAVPSLKD 745

Query: 420 AAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKDSFPKGGK 462
           A VGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKDS+ KGGK
Sbjct: 746 AKVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKDSYGKGGK 788

Length = 788
>gnl|CDD|235424 PRK05347, PRK05347, glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|232977 TIGR00440, glnS, glutaminyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|237793 PRK14703, PRK14703, glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>gnl|CDD|240418 PTZ00437, PTZ00437, glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|216096 pfam00749, tRNA-synt_1c, tRNA synthetases class I (E and Q), catalytic domain Back     alignment and domain information
>gnl|CDD|185676 cd00807, GlnRS_core, catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|223087 COG0008, GlnS, Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|215492 PLN02907, PLN02907, glutamate-tRNA ligase Back     alignment and domain information
>gnl|CDD|240404 PTZ00402, PTZ00402, glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235229 PRK04156, gltX, glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|232985 TIGR00463, gltX_arch, glutamyl-tRNA synthetase, archaeal and eukaryotic family Back     alignment and domain information
>gnl|CDD|178772 PLN03233, PLN03233, putative glutamate-tRNA ligase; Provisional Back     alignment and domain information
>gnl|CDD|217810 pfam03950, tRNA-synt_1c_C, tRNA synthetases class I (E and Q), anti-codon binding domain Back     alignment and domain information
>gnl|CDD|185682 cd09287, GluRS_non_core, catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|185672 cd00418, GlxRS_core, catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|185676 cd00807, GlnRS_core, catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>gnl|CDD|234953 PRK01406, gltX, glutamyl-tRNA synthetase; Reviewed Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 462
PRK05347554 glutaminyl-tRNA synthetase; Provisional 100.0
PLN02859788 glutamine-tRNA ligase 100.0
PTZ00437574 glutaminyl-tRNA synthetase; Provisional 100.0
PRK14703 771 glutaminyl-tRNA synthetase/YqeY domain fusion prot 100.0
TIGR00440522 glnS glutaminyl-tRNA synthetase. This protein is a 100.0
PLN03233523 putative glutamate-tRNA ligase; Provisional 100.0
KOG1148764 consensus Glutaminyl-tRNA synthetase [Translation, 100.0
PTZ00402601 glutamyl-tRNA synthetase; Provisional 100.0
PLN02907722 glutamate-tRNA ligase 100.0
KOG1147712 consensus Glutamyl-tRNA synthetase [Translation, r 100.0
PRK04156567 gltX glutamyl-tRNA synthetase; Provisional 100.0
TIGR00463560 gltX_arch glutamyl-tRNA synthetase, archaeal and e 100.0
COG0008472 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr 100.0
PRK12410433 glutamylglutaminyl-tRNA synthetase; Provisional 100.0
PLN02627535 glutamyl-tRNA synthetase 100.0
cd00807238 GlnRS_core catalytic core domain of glutaminyl-tRN 100.0
PRK12558445 glutamyl-tRNA synthetase; Provisional 100.0
KOG1149524 consensus Glutamyl-tRNA synthetase (mitochondrial) 100.0
PF00749314 tRNA-synt_1c: tRNA synthetases class I (E and Q), 100.0
cd09287240 GluRS_non_core catalytic core domain of non-discri 100.0
PRK01406476 gltX glutamyl-tRNA synthetase; Reviewed 100.0
PRK14895513 gltX glutamyl-tRNA synthetase; Provisional 100.0
PRK05710299 glutamyl-Q tRNA(Asp) synthetase; Reviewed 100.0
TIGR00464470 gltX_bact glutamyl-tRNA synthetase, bacterial fami 100.0
TIGR03838272 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthe 100.0
PF03950174 tRNA-synt_1c_C: tRNA synthetases class I (E and Q) 100.0
cd00418230 GlxRS_core catalytic core domain of glutamyl-tRNA 100.0
cd00808239 GluRS_core catalytic core domain of discriminating 100.0
cd00671212 ArgRS_core catalytic core domain of arginyl-tRNA s 99.27
PRK00260463 cysS cysteinyl-tRNA synthetase; Validated 98.46
TIGR00435465 cysS cysteinyl-tRNA synthetase. This model finds t 98.27
PRK14534481 cysS cysteinyl-tRNA synthetase; Provisional 98.09
PRK01611507 argS arginyl-tRNA synthetase; Reviewed 98.08
cd00802143 class_I_aaRS_core catalytic core domain of class I 98.07
PRK12418384 cysteinyl-tRNA synthetase; Provisional 97.92
PRK14536490 cysS cysteinyl-tRNA synthetase; Provisional 97.92
TIGR03447411 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino- 97.7
PLN02946557 cysteine-tRNA ligase 97.63
PRK11893511 methionyl-tRNA synthetase; Reviewed 97.58
PRK14535699 cysS cysteinyl-tRNA synthetase; Provisional 97.57
COG0215464 CysS Cysteinyl-tRNA synthetase [Translation, ribos 97.5
PRK00750510 lysK lysyl-tRNA synthetase; Reviewed 97.43
PF01406300 tRNA-synt_1e: tRNA synthetases class I (C) catalyt 97.43
PTZ00399651 cysteinyl-tRNA-synthetase; Provisional 96.84
cd00674353 LysRS_core_class_I catalytic core domain of class 95.57
TIGR00456566 argS arginyl-tRNA synthetase. This model recognize 95.54
PRK12451562 arginyl-tRNA synthetase; Reviewed 95.44
cd00668312 Ile_Leu_Val_MetRS_core catalytic core domain of is 95.05
TIGR00467515 lysS_arch lysyl-tRNA synthetase, archaeal and spir 94.67
PLN02286576 arginine-tRNA ligase 94.48
PF09334391 tRNA-synt_1g: tRNA synthetases class I (M); InterP 93.94
TIGR00398530 metG methionyl-tRNA synthetase. The methionyl-tRNA 92.97
PLN02610 801 probable methionyl-tRNA synthetase 92.23
PRK12268556 methionyl-tRNA synthetase; Reviewed 91.87
cd00806280 TrpRS_core catalytic core domain of tryptophanyl-t 91.68
KOG2007586 consensus Cysteinyl-tRNA synthetase [Translation, 91.6
PRK12267648 methionyl-tRNA synthetase; Reviewed 91.12
PRK00133673 metG methionyl-tRNA synthetase; Reviewed 90.99
TIGR00395938 leuS_arch leucyl-tRNA synthetase, archaeal and cyt 90.89
PLN02224616 methionine-tRNA ligase 90.03
cd00812314 LeuRS_core catalytic core domain of leucyl-tRNA sy 89.18
PRK12285368 tryptophanyl-tRNA synthetase; Reviewed 88.22
PF00749314 tRNA-synt_1c: tRNA synthetases class I (E and Q), 87.38
COG0008472 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr 87.36
cd00814319 MetRS_core catalytic core domain of methioninyl-tR 86.41
PRK12300897 leuS leucyl-tRNA synthetase; Reviewed 84.29
PRK13208800 valS valyl-tRNA synthetase; Reviewed 83.52
COG0018577 ArgS Arginyl-tRNA synthetase [Translation, ribosom 82.84
COG0143558 MetG Methionyl-tRNA synthetase [Translation, ribos 81.79
cd02156105 nt_trans nucleotidyl transferase superfamily. nt_t 81.54
cd00805269 TyrRS_core catalytic core domain of tyrosinyl-tRNA 80.31
>PRK05347 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=3e-138  Score=1096.67  Aligned_cols=451  Identities=53%  Similarity=0.897  Sum_probs=435.3

Q ss_pred             CCcccC-CceecccCHHHHHHHHHHHHhCCCeEEeCCCHHHHHHHhC----CCCCCCCCCCChhHHHHHHHHHhCCcccC
Q 012516            1 MGWEPF-KITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYRE----KKMNSPWRDRPIAESLKLFEDMRNGRIEE   75 (462)
Q Consensus         1 LGl~wD-~~~~QS~r~~~y~~~a~~Li~~G~AY~c~cs~eel~~~r~----~~~~~~~R~~~~ee~l~~~~~m~~G~~~~   75 (462)
                      |||+|| ++|+||+||++|+++|++||++|+||+|+||+|||++.|+    +|++|+||++|+||++++|++|++|.+.+
T Consensus        91 LGi~~d~~~~~qS~r~~~~y~~a~~Li~~G~AY~c~cs~eei~~~R~~~~~~g~~~~~R~~s~eenl~~~~~m~~G~~~~  170 (554)
T PRK05347         91 LGFDWSGELRYASDYFDQLYEYAVELIKKGKAYVDDLSAEEIREYRGTLTEPGKNSPYRDRSVEENLDLFERMRAGEFPE  170 (554)
T ss_pred             cCCCCCCCceeeecCHHHHHHHHHHHHHcCCEeeCCCCHHHHHHHhhhhhhcCCCCCccCCCHHHHHHHHHHHHCCCCCC
Confidence            799996 8999999999999999999999999999999999999997    48999999999999999999999999999


Q ss_pred             CceEEEEeecCCCCCCcCCCcEEEEEecCCCCCCCCccccccccceeeeeecCCCccceEeeccccccccHHHHHHHHHh
Q 012516           76 GKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHAL  155 (462)
Q Consensus        76 ~~~~lR~K~d~~~~n~~~~D~Vi~R~~~~~h~~~gd~~~~~PtY~fA~~VDD~l~gITHviRg~e~l~~t~~q~~l~~aL  155 (462)
                      |++|||+|+||+++|++|+|||+||++.++||++||+|+||||||||||||||+|||||||||+||++|||+|.|||++|
T Consensus       171 g~~vlR~Kid~~~~n~~~rD~Vi~R~~~~~H~r~G~k~~iyPtYdfA~~vdD~l~gITHvlRg~E~~~~t~~~~~i~~al  250 (554)
T PRK05347        171 GSAVLRAKIDMASPNINMRDPVLYRIRHAHHHRTGDKWCIYPMYDFAHCISDAIEGITHSLCTLEFEDHRPLYDWVLDNL  250 (554)
T ss_pred             CcEEEEEEeeccCCCCCCCCCEEEEecCCCCCccCCceeeecCcCccceeeccccCCceEEeccccccChHHHHHHHHHc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CC-CCCeEEEEeeecCCCcccccccccccccccccCCCCCchhhhHHHHHHcCCCHHHHHHHHHHcCccCCCccccHHHH
Q 012516          156 GL-YQPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRL  234 (462)
Q Consensus       156 g~-~~P~~~h~~~l~~~g~kLSKR~~~~~v~~~~~~gwddPr~~ti~~lr~rG~~peAi~~f~~~lG~s~~~~~~~~~~l  234 (462)
                      || ..|.++||+|||++|++||||+++++|++|.|.|||||||+||++||||||+||||+|||++||||++++.|+|++|
T Consensus       251 g~~~~P~~~~F~rln~~~~~LSKRkl~~lV~~g~v~GWDDPRl~Ti~~lrrrG~~PeAi~nf~~~lG~s~~~~~i~~~~L  330 (554)
T PRK05347        251 PIPPHPRQYEFSRLNLTYTVMSKRKLKQLVEEKHVDGWDDPRMPTISGLRRRGYTPESIREFCERIGVTKQDSVIDMSML  330 (554)
T ss_pred             CCCCCCceEEEEEECCCCCccccccchhccccCcccCccCCcchhHHHHHHCCCCHHHHHHHHHHhCCCCCCCeecHHHH
Confidence            96 58999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhccCCcceeeecceEEEEEecCCCeEEEEEeecCCCCCCCCCCCeEEEeecceEEEecCcccccCCcCcccc
Q 012516          235 EYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGL  314 (462)
Q Consensus       235 ~~~nr~~l~~~~~r~~~v~~p~~~~i~n~~~~~~~~~~~p~~p~~~k~~~~G~r~v~~~~~i~Ie~~D~~~~~~~~f~~l  314 (462)
                      |++||++|++.|+|+|||+||++|+|+|+++...+++++|+||+   +|++|+|++.|+++||||++||++.++++|+||
T Consensus       331 ~~~nRk~ld~~a~R~m~V~~pv~v~i~n~~~~~~~~~~~p~hP~---~~~~G~r~i~~~~~iyIe~~D~~~~~~~~~~rl  407 (554)
T PRK05347        331 ESCIREDLNENAPRAMAVLDPLKLVITNYPEGQVEELEAPNHPE---DPEMGTREVPFSRELYIEREDFMEEPPKKYFRL  407 (554)
T ss_pred             HHHHHHHhccCCCceEEEcCCeEEEEEeCCCCceEEEEecCCCC---CCcCceEEEEEcCeEEEEhHHhhcccccccccc
Confidence            99999999999999999999999999999877667899999998   789999999999999999999999999999999


Q ss_pred             CCCCEEEEeeceeEEEEEEEecCCCCCEEEEEEEEeCC-------CCCCCceeEEeccCCCCCCCCeEEEEEeccccCCC
Q 012516          315 APGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPS-------KKTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNS  387 (462)
Q Consensus       315 ~~g~~V~Lk~~~~i~~~~~~~~d~~g~v~~l~~~~~~~-------~~kK~k~~IhWVs~~~~~~~~v~vevr~y~~Lf~~  387 (462)
                      +||++|||+++|+|+|++++ +|++|+|++++|+|+++       +.+|++++|||||+    .++++|+|++||+||++
T Consensus       408 ~~g~~vrL~~~~~i~~~~~~-kd~~g~v~~~~~~~~~~~~~g~~~~~kk~k~~IhWv~~----~~~v~~~v~~yd~Lf~~  482 (554)
T PRK05347        408 VPGKEVRLRNAYVIKCEEVV-KDADGNITEIHCTYDPDTLSGNPADGRKVKGTIHWVSA----AHAVPAEVRLYDRLFTV  482 (554)
T ss_pred             CCCCEEEecCEEEEEEEEEE-EcCCCCEEEEEEEEccccccCCCccCcccCCEEEeeec----CCCEeEEEEEeccccCC
Confidence            99999999999999999998 89999999999999876       34688889999997    56899999999999999


Q ss_pred             CCCCCcccccccCCCCCceeecceEeccccccCCCCCeEEEEEeeeEEEecCCCCCceEEEeecCCCCCCCCC
Q 012516          388 ENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDKDSTPEKLVFNRTVTLKDSFPKG  460 (462)
Q Consensus       388 ~~p~~~~~~~~~iN~~S~~~~~~~~~E~~~~~~k~g~~iQFER~Gyf~vD~~~~~~~lVfn~~v~Lk~~~~~~  460 (462)
                      ++|+++++|+++|||+|+.+. .|++|++++++++|++|||||+|||+||.+++++++||||||+||++|+|+
T Consensus       483 ~~p~~~~~~~~~iN~~s~~~~-~~~~E~~~~~~~~~~~~QfeR~Gyf~~D~~~~~~~~v~n~~v~l~d~~~k~  554 (554)
T PRK05347        483 PNPAAGKDFLDFLNPDSLVIK-QGFVEPSLADAKPEDRFQFEREGYFCADKDSTPGKLVFNRTVGLRDSWAKI  554 (554)
T ss_pred             CCCCccccHhHhcCCCceEEE-eEEEcHHHhhCCCCCEEEEEEeeEEEecCCCCCCCeEEEeeeecccccCCC
Confidence            999988999999999999766 899999999999999999999999999988888999999999999999874

>PLN02859 glutamine-tRNA ligase Back     alignment and domain information
>PTZ00437 glutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional Back     alignment and domain information
>TIGR00440 glnS glutaminyl-tRNA synthetase Back     alignment and domain information
>PLN03233 putative glutamate-tRNA ligase; Provisional Back     alignment and domain information
>KOG1148 consensus Glutaminyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PTZ00402 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02907 glutamate-tRNA ligase Back     alignment and domain information
>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR00463 gltX_arch glutamyl-tRNA synthetase, archaeal and eukaryotic family Back     alignment and domain information
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12410 glutamylglutaminyl-tRNA synthetase; Provisional Back     alignment and domain information
>PLN02627 glutamyl-tRNA synthetase Back     alignment and domain information
>cd00807 GlnRS_core catalytic core domain of glutaminyl-tRNA synthetase Back     alignment and domain information
>PRK12558 glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>KOG1149 consensus Glutamyl-tRNA synthetase (mitochondrial) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd09287 GluRS_non_core catalytic core domain of non-discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>PRK01406 gltX glutamyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK14895 gltX glutamyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK05710 glutamyl-Q tRNA(Asp) synthetase; Reviewed Back     alignment and domain information
>TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family Back     alignment and domain information
>TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase Back     alignment and domain information
>PF03950 tRNA-synt_1c_C: tRNA synthetases class I (E and Q), anti-codon binding domain; InterPro: IPR020059 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase Back     alignment and domain information
>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase Back     alignment and domain information
>cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases Back     alignment and domain information
>PRK00260 cysS cysteinyl-tRNA synthetase; Validated Back     alignment and domain information
>TIGR00435 cysS cysteinyl-tRNA synthetase Back     alignment and domain information
>PRK14534 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK01611 argS arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase Back     alignment and domain information
>PRK12418 cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>PRK14536 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase Back     alignment and domain information
>PLN02946 cysteine-tRNA ligase Back     alignment and domain information
>PRK11893 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK14535 cysS cysteinyl-tRNA synthetase; Provisional Back     alignment and domain information
>COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>PTZ00399 cysteinyl-tRNA-synthetase; Provisional Back     alignment and domain information
>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase Back     alignment and domain information
>TIGR00456 argS arginyl-tRNA synthetase Back     alignment and domain information
>PRK12451 arginyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases Back     alignment and domain information
>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete Back     alignment and domain information
>PLN02286 arginine-tRNA ligase Back     alignment and domain information
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>TIGR00398 metG methionyl-tRNA synthetase Back     alignment and domain information
>PLN02610 probable methionyl-tRNA synthetase Back     alignment and domain information
>PRK12268 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>cd00806 TrpRS_core catalytic core domain of tryptophanyl-tRNA synthetase Back     alignment and domain information
>KOG2007 consensus Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK12267 methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK00133 metG methionyl-tRNA synthetase; Reviewed Back     alignment and domain information
>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family Back     alignment and domain information
>PLN02224 methionine-tRNA ligase Back     alignment and domain information
>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases Back     alignment and domain information
>PRK12285 tryptophanyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6 Back     alignment and domain information
>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases Back     alignment and domain information
>PRK12300 leuS leucyl-tRNA synthetase; Reviewed Back     alignment and domain information
>PRK13208 valS valyl-tRNA synthetase; Reviewed Back     alignment and domain information
>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd02156 nt_trans nucleotidyl transferase superfamily Back     alignment and domain information
>cd00805 TyrRS_core catalytic core domain of tyrosinyl-tRNA synthetase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query462
1qrs_A553 Glutaminyl-Trna Synthetase Mutant D235n Complexed W 1e-114
1qrt_A553 Glutaminyl-Trna Synthetase Mutant D235g Complexed W 1e-114
1o0b_A554 Crystal Structure Of L-Glutamine And Ampcpp Bound T 1e-114
1gsg_P553 Structure Of E.Coli Glutaminyl-Trna Synthetase Comp 1e-114
1qru_A553 Glutaminyl-Trna Synthetase Mutant I129t Complexed W 1e-113
1euq_A548 Crystal Structure Of Glutaminyl-Trna Synthetase Com 1e-113
1nyl_A539 Unliganded Glutaminyl-Trna Synthetase Length = 539 1e-113
2rd2_A556 Glutaminyl-Trna Synthetase Mutant C229r With Bound 1e-112
2hz7_A 851 Crystal Structure Of The Glutaminyl-Trna Synthetase 4e-77
3aii_A553 Archaeal Non-Discriminating Glutamyl-Trna Synthetas 3e-24
>pdb|1QRS|A Chain A, Glutaminyl-Trna Synthetase Mutant D235n Complexed With Glutamine Transfer Rna Length = 553 Back     alignment and structure 
Iteration: 1

 Score =  409 bits (1050), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 222/469 (47%), Positives = 302/469 (64%), Gaps = 25/469 (5%)
Query: 8   ITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYR----EKKMNSPWRDRPIAESLK 63
           + Y+SDYF +L+  A+ELI +G AYVD  TPE+I+EYR    +   NSP+RDR + E+L 
Sbjct: 96  VRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLA 155
Query: 64  LFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAH 123
           LFE MR G  EEGKA LR K DM +    M D + YRIKF  H   G+KWCIYP YD+ H
Sbjct: 156 LFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTH 215
Query: 124 CIVDSIENITHSLCTLEFETRRASYFWLLHALGL-YQPYVWEYSRLNVSNTVMSKRKLNF 182
           CI D++E ITHSLCTLEF+  R  Y W+L  + +   P  +E+SRLN+  TVMSKRKLN 
Sbjct: 216 CISDALEGITHSLCTLEFQNNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNL 275
Query: 183 LVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRLEYHIREEL 242
           LVT+K+V+GWDDP + T++GLRRRG T+ SI  F + IG+++ D+ I +  LE  IRE+L
Sbjct: 276 LVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIREDL 335
Query: 243 NKTAPRTMVVLNPLKVVITNMES-GTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHS 301
           N+ APR M V++P+K+VI N +  G ++ +     P+          +VPFS  ++I+ +
Sbjct: 336 NENAPRAMAVIDPVKLVIENYQGEGEMVTM-----PNHPNKPEMGSRQVPFSGEIWIDRA 390
Query: 302 DFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEY-------DPSKK 354
           DFR + +K Y  L  GK V LR A+ IK  E +  D +  I  I   Y       DP+  
Sbjct: 391 DFREEANKQYKRLVLGKEVRLRNAYVIK-AERVEKDAEGNITTIFCTYDADTLSKDPADG 449
Query: 355 TKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAE 414
            K KGV+HWV+      + L VE+RL+++LF+  NP   DD+LS +NP+S +VI + +AE
Sbjct: 450 RKVKGVIHWVS----AAHALPVEIRLYDRLFSVPNPGAADDFLSVINPES-LVIKQGFAE 504
Query: 415 PSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNRTVTLKDSFPKGGK 462
           PSL  A  G  FQFER GYF +D + ST EK VFNRTV L+D++ K G+
Sbjct: 505 PSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVGE 553
>pdb|1QRT|A Chain A, Glutaminyl-Trna Synthetase Mutant D235g Complexed With Glutamine Transfer Rna Length = 553 Back     alignment and structure
>pdb|1O0B|A Chain A, Crystal Structure Of L-Glutamine And Ampcpp Bound To Glutamine Aminoacyl Trna Synthetase Length = 554 Back     alignment and structure
>pdb|1GSG|P Chain P, Structure Of E.Coli Glutaminyl-Trna Synthetase Complexed With Trnagln And Atp At 2.8 Angstroms Resolution Length = 553 Back     alignment and structure
>pdb|1QRU|A Chain A, Glutaminyl-Trna Synthetase Mutant I129t Complexed With Glutamine Transfer Rna Length = 553 Back     alignment and structure
>pdb|1EUQ|A Chain A, Crystal Structure Of Glutaminyl-Trna Synthetase Complexed With A Trna- Gln Mutant And An Active-Site Inhibitor Length = 548 Back     alignment and structure
>pdb|1NYL|A Chain A, Unliganded Glutaminyl-Trna Synthetase Length = 539 Back     alignment and structure
>pdb|2RD2|A Chain A, Glutaminyl-Trna Synthetase Mutant C229r With Bound Analog 5'-O-[n-(L- Glutaminyl)-Sulfamoyl]adenosine Length = 556 Back     alignment and structure
>pdb|2HZ7|A Chain A, Crystal Structure Of The Glutaminyl-Trna Synthetase From Deinococcus Radiodurans Length = 851 Back     alignment and structure
>pdb|3AII|A Chain A, Archaeal Non-Discriminating Glutamyl-Trna Synthetase From Methanothermobacter Thermautotrophicus Length = 553 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query462
1qtq_A553 GLNRS, protein (glutaminyl-tRNA synthetase); gluta 0.0
2hz7_A 851 Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c 0.0
3aii_A553 Glutamyl-tRNA synthetase; amino-acyl tRNA syntheta 0.0
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-08
4g6z_A490 Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, 1e-04
2cfo_A492 Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA s 3e-04
1j09_A468 Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, r 5e-04
2o5r_A481 Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g 8e-04
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A Length = 553 Back     alignment and structure
 Score =  724 bits (1871), Expect = 0.0
 Identities = 221/476 (46%), Positives = 299/476 (62%), Gaps = 24/476 (5%)

Query: 1   MGWE-PFKITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYR----EKKMNSPWRD 55
           +G+     + Y+SDYF +L+  A+ELI +G AYVD  TPE+I+EYR    +   NSP+RD
Sbjct: 88  LGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRD 147

Query: 56  RPIAESLKLFEDMRNGRIEEGKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCI 115
           R + E+L LFE MR G  EEGKA LR K DM +    M D + YRIKF  H   G+KWCI
Sbjct: 148 RSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCI 207

Query: 116 YPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHALGL-YQPYVWEYSRLNVSNTV 174
           YP YD+ HCI D++E ITHSLCTLEF+  R  Y W+L  + +   P  +E+SRLN+  TV
Sbjct: 208 YPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTV 267

Query: 175 MSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRL 234
           MSKRKLN LVT+K+V+GWDDP + T++GLRRRG T+ SI  F + IG+++ D+ I +  L
Sbjct: 268 MSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASL 327

Query: 235 EYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSN 294
           E  IRE+LN+ APR M V++P+K+VI N + G    +     P           +VPFS 
Sbjct: 328 ESCIREDLNENAPRAMAVIDPVKLVIENYQ-GEGEMVTMPNHP---NKPEMGSRQVPFSG 383

Query: 295 VVYIEHSDFRMKDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKK 354
            ++I+ +DFR + +K Y  L  GK V LR A+ IK   V   D +  I  I   YD    
Sbjct: 384 EIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKAERVE-KDAEGNITTIFCTYDADTL 442

Query: 355 T-------KPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVV 407
           +       K KGV+HWV+      + L VE+RL+++LF+  NP   DD+LS +NP+S V+
Sbjct: 443 SKDPADGRKVKGVIHWVSAA----HALPVEIRLYDRLFSVPNPGAADDFLSVINPESLVI 498

Query: 408 IPEAYAEPSLHSAAVGDRFQFERLGYFAVD-KDSTPEKLVFNRTVTLKDSFPKGGK 462
             + +AEPSL  A  G  FQFER GYF +D + ST EK VFNRTV L+D++ K G+
Sbjct: 499 K-QGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVGE 553
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} Length = 851 Back     alignment and structure
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid} Length = 553 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>4g6z_A Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, AARS, class 1B AARS, ATP-dependen charging, protein synthesis, structural genomics; HET: GLU; 2.05A {Burkholderia thailandensis} Length = 490 Back     alignment and structure
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus} Length = 492 Back     alignment and structure
>1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A Length = 468 Back     alignment and structure
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} Length = 481 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query462
1qtq_A553 GLNRS, protein (glutaminyl-tRNA synthetase); gluta 100.0
2hz7_A 851 Glutaminyl-tRNA synthetase; rossmann fold, GLNRS c 100.0
3aii_A553 Glutamyl-tRNA synthetase; amino-acyl tRNA syntheta 100.0
4gri_A512 Glutamate--tRNA ligase; structural genomics, seatt 100.0
4g6z_A490 Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, 100.0
2ja2_A498 Glutamyl-tRNA synthetase; non-discriminating gluta 100.0
1j09_A468 Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, r 100.0
2cfo_A492 Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA s 100.0
3afh_A488 Glutamyl-tRNA synthetase 2; protein-substrate comp 100.0
2o5r_A481 Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, g 100.0
3al0_C592 Glutamyl-tRNA(Gln) amidotransferase subunit C, GL 100.0
1nzj_A298 Hypothetical protein YADB; Zn cluster, glutamyl T- 100.0
1irx_A523 Lysyl-tRNA synthetase; beta sandwitch, zinc-bindin 99.46
1li5_A461 Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys 99.14
1iq0_A592 Arginyl-tRNA synthetase; riken structural genomics 98.96
3c8z_A414 Cysteinyl-tRNA synthetase; cysteine ligase, rossma 98.85
2csx_A497 Methionyl-tRNA synthetase; ligase, riken structura 98.77
3tqo_A462 Cysteinyl-tRNA synthetase; protein synthesis, liga 98.65
3fnr_A464 Arginyl-tRNA synthetase; transferase, PSI-2, NYSGX 98.57
2d5b_A500 Methionyl-tRNA synthetase; rossmann fold, class 1A 98.46
2dlc_X394 Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligas 98.42
2cyb_A323 Tyrosyl-tRNA synthetase; rossmann-fold, structural 97.96
3sp1_A501 Cysteinyl-tRNA synthetase; structural genomics, se 97.94
3h99_A560 Methionyl-tRNA synthetase; rossmann fold, aminoacy 97.92
1n3l_A372 Tyrosyl-tRNA synthetase; rossmann fold AS catalyti 97.74
1f7u_A607 Arginyl-tRNA synthetase; RNA-protein complex, amin 97.62
2x1l_A524 Methionyl-tRNA synthetase; nucleotide-binding, pro 97.54
4dlp_A536 Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA 97.25
2zue_A629 Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase 96.72
3kfl_A564 Methionyl-tRNA synthetase; parasite, aminoacyl-tRN 91.74
3u1f_A542 Methionyl-tRNA synthetase; aminoacyl-tRNA syntheta 89.58
1rqg_A 722 Methionyl-tRNA synthetase; translation, dimerizati 88.55
2cya_A364 Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, st 86.64
1ile_A821 Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA s 83.29
2g36_A340 Tryptophanyl-tRNA synthetase; TM0492, structural g 81.55
2yy5_A348 Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synt 80.17
>1qtq_A GLNRS, protein (glutaminyl-tRNA synthetase); glutamine, trnaGln, E. coli, complex, ligase/RNA complex; HET: QSI; 2.25A {Escherichia coli} SCOP: b.53.1.2 c.26.1.1 PDB: 1gsg_P* 1gts_A* 1gtr_A* 1zjw_A* 1o0b_A* 1o0c_A* 1qru_A* 1qrs_A* 1qrt_A* 1euy_A* 1euq_A* 1exd_A* 2rd2_A* 2re8_A* 1nyl_A Back     alignment and structure
Probab=100.00  E-value=1.6e-127  Score=1021.22  Aligned_cols=451  Identities=49%  Similarity=0.842  Sum_probs=426.2

Q ss_pred             CCcccC-CceecccCHHHHHHHHHHHHhCCCeEEeCCCHHHHHHHhC----CCCCCCCCCCChhHHHHHHHHHhCCcccC
Q 012516            1 MGWEPF-KITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYRE----KKMNSPWRDRPIAESLKLFEDMRNGRIEE   75 (462)
Q Consensus         1 LGl~wD-~~~~QS~r~~~y~~~a~~Li~~G~AY~c~cs~eel~~~r~----~~~~~~~R~~~~ee~l~~~~~m~~G~~~~   75 (462)
                      |||+|| .+|+||+|+++|+++|++||++|+||+|+||++||++.|+    +|++|+||+++++|++.+|++|.+|.+.+
T Consensus        88 LGl~wde~~~~qSer~~~~~~~a~~Li~~G~AY~c~ct~eel~~~r~~~~~~g~~~~~R~~s~ee~~~~fe~m~~G~~~~  167 (553)
T 1qtq_A           88 LGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEE  167 (553)
T ss_dssp             TTCCCSSSCEEGGGGHHHHHHHHHHHHHTTSEEEECCCHHHHHHHHCCSSSCCCCCTTTTCCHHHHHHHHHHHHTTCSCT
T ss_pred             cCCCCCCCCeehcccHHHHHHHHHHHHHCCCceecCCCHHHHHHHhcccccCCCCCccccCchhhhHhHHHHHhCCCccC
Confidence            899997 7999999999999999999999999999999999999985    68999999999999999999999999888


Q ss_pred             CceEEEEeecCCCCCCcCCCcEEEEEecCCCCCCCCccccccccceeeeeecCCCccceEeeccccccccHHHHHHHHHh
Q 012516           76 GKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHAL  155 (462)
Q Consensus        76 ~~~~lR~K~d~~~~n~~~~D~Vi~R~~~~~h~~~gd~~~~~PtY~fA~~VDD~l~gITHviRg~e~l~~t~~q~~l~~aL  155 (462)
                      |++|||+|++|.+++.+++|||++|+...+||++||+|+|+||||||||||||+|||||||||+||++||++|.|||++|
T Consensus       168 g~~~lR~kid~~~~~~~~~D~Vl~R~~~~~h~~~~d~w~g~PtY~la~vvDDh~~GITHviRg~e~~~n~~~q~~l~~al  247 (553)
T 1qtq_A          168 GKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNI  247 (553)
T ss_dssp             TSCEEEECSCTTCSSGGGSSCEEEEECCCCBTTTBTSCSEEECHHHHHHHHHHHTTCSEEEEEGGGTTTHHHHHHHHHTS
T ss_pred             CceEEEEecccccCCCCCCCcEEEEecCCCCCccCCCCccccccccccEEEeccCCcceEeeccchhhhHHHHHHHHHHc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCC-CCeEEEEeeecCCCcccccccccccccccccCCCCCchhhhHHHHHHcCCCHHHHHHHHHHcCccCCCccccHHHH
Q 012516          156 GLY-QPYVWEYSRLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRL  234 (462)
Q Consensus       156 g~~-~P~~~h~~~l~~~g~kLSKR~~~~~v~~~~~~gwddPr~~ti~~lr~rG~~peAi~~f~~~lG~s~~~~~~~~~~l  234 (462)
                      ||+ .|.++||+|||++|+|||||++.++|++|.|+||||||++||++||++||+|+||++||+++|||+++..+++..|
T Consensus       248 g~~~~P~~~~f~hLn~~g~KLSKR~~~~~v~~g~v~gWDDPr~~Ti~~lr~rGy~PeAirnfl~~lG~s~~~~~~e~~~l  327 (553)
T 1qtq_A          248 TIPVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASL  327 (553)
T ss_dssp             CCSCCCEEEEECCCCBTTSCCCHHHHHHHHHTTSSSCTTCTTSCBHHHHHHHTCCHHHHHHHHHHHCCCSSCCCBCHHHH
T ss_pred             CCCCCCCeEEEEeecCCCccccccccccccccCcccCCCCcchhhHHHHHHCCCCHHHHHHHHHHcCCCCCccccchhhH
Confidence            998 7999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhccCCcceeeecceEEEEEecCCCeEEEEEeecCCCCCCCCCCCeEEEeecceEEEecCcccccCCcCcccc
Q 012516          235 EYHIREELNKTAPRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRMKDSKDYYGL  314 (462)
Q Consensus       235 ~~~nr~~l~~~~~r~~~v~~p~~~~i~n~~~~~~~~~~~p~~p~~~k~~~~G~r~v~~~~~i~Ie~~D~~~~~~~~f~~l  314 (462)
                      +.++|..|++.++|.|||+||+||.|+|+| ...+.+++|+||+   ++++|+|.++|+++||||++||++.++|+|+||
T Consensus       328 e~~~~~~l~~~~~r~~av~d~~Kl~~~N~~-~~~~~~~~p~~p~---~~~~g~r~~~~~~~i~ie~~Df~e~~~~~~~rl  403 (553)
T 1qtq_A          328 ESCIREDLNENAPRAMAVIDPVKLVIENYQ-GEGEMVTMPNHPN---KPEMGSRQVPFSGEIWIDRADFREEANKQYKRL  403 (553)
T ss_dssp             HHHHHHHHHHHSCEECEESSEEEEEBTTCC-SSCEEEEEESCSS---CGGGCEEEEEECSEEEEETTTEESSCCTTCCSE
T ss_pred             HHHHHhCcccccccccceeccceEEEEcCC-CceEEEEecCCCC---ChHHhhhhHhhCceEEEEHHHhhccCccccccC
Confidence            999999999999999999999999999998 4447899999998   799999999999999999999999999999999


Q ss_pred             CCCCEEEEeeceeEEEEEEEecCCCCCEEEEEEEEeCCC-------CCCCceeEEeccCCCCCCCCeEEEEEeccccCCC
Q 012516          315 APGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSK-------KTKPKGVLHWVAEPSPGVNPLRVEVRLFEKLFNS  387 (462)
Q Consensus       315 ~~g~~V~Lk~~~~i~~~~~~~~d~~g~v~~l~~~~~~~~-------~kK~k~~IhWVs~~~~~~~~v~vevr~y~~Lf~~  387 (462)
                      +||++||||++|+|+|++++ +|++|+|++|+|+|++++       .+|+|++|||||+    .++++||||+||+||++
T Consensus       404 ~~g~~vrL~~~~~i~~~~~~-kd~~g~v~~~~~~~~~~~~~g~~~~~~k~k~~ihWv~~----~~~~~~~~~~yd~L~~~  478 (553)
T 1qtq_A          404 VLGKEVRLRNAYVIKAERVE-KDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSA----AHALPVEIRLYDRLFSV  478 (553)
T ss_dssp             ETTSEEEETTSCEEEEEEEE-CCSSSCCCEEEECCCSSCC-----------CEECCEES----TTCEEEEEEEECCSBSS
T ss_pred             CCCCEEEeccEEEEEEEEEE-EcCCCCEEEEEEEEecccccCCCccccccCCEEEEeec----CCCEeEEEEecccccCC
Confidence            99999999999999999999 899999999999999863       3788999999998    67899999999999999


Q ss_pred             CCCCCcccccccCCCCCceeecceEeccccccCCCCCeEEEEEeeeEEEec-CCCCCceEEEeecCCCCCCCCCC
Q 012516          388 ENPAELDDWLSDLNPDSKVVIPEAYAEPSLHSAAVGDRFQFERLGYFAVDK-DSTPEKLVFNRTVTLKDSFPKGG  461 (462)
Q Consensus       388 ~~p~~~~~~~~~iN~~S~~~~~~~~~E~~~~~~k~g~~iQFER~Gyf~vD~-~~~~~~lVfn~~v~Lk~~~~~~~  461 (462)
                      ++|++.++|+++|||+|+.+. .|++|++++++++|++|||||+|||+||+ +++++++||||||+||++|+|..
T Consensus       479 ~~p~~~~~~~~~~np~s~~~~-~~~~e~~~~~~~~~~~~QfeR~Gyf~~D~~~~~~~~~vfnr~v~l~~~~~~~~  552 (553)
T 1qtq_A          479 PNPGAADDFLSVINPESLVIK-QGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVG  552 (553)
T ss_dssp             SCGGGSTTGGGGBCTTSEEEE-EEEECGGGGGCCTTCEEEETTTEEEESCTTTCCSSSCEEEEEEECCCC-----
T ss_pred             CCCCcCcchhhhcCCcchhhe-eeEecHhHhhCCCCCEEEEEEeeEEEECcCCCCCCCeeEEeEEEcccchhhhc
Confidence            999866899999999999987 78999999999999999999999999997 78889999999999999999853
>2hz7_A Glutaminyl-tRNA synthetase; rossmann fold, GLNRS core, class I aminoacyl-tRNA synthetase, ligase; 2.30A {Deinococcus radiodurans} Back     alignment and structure
>3aii_A Glutamyl-tRNA synthetase; amino-acyl tRNA synthetase, ligase; 1.65A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>4gri_A Glutamate--tRNA ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, aminoacyl-tRNA synthetase; HET: GLU; 2.60A {Borrelia burgdorferi} Back     alignment and structure
>4g6z_A Glutamate-tRNA ligase; aminoacyl-tRNA synthetase, AARS, class 1B AARS, ATP-dependen charging, protein synthesis, structural genomics; HET: GLU; 2.05A {Burkholderia thailandensis} Back     alignment and structure
>2ja2_A Glutamyl-tRNA synthetase; non-discriminating glutamyl-tRNA aminoacylation, protein biosynthesis, aminoacyl-tRNA synthetase, ligase; 1.65A {Mycobacterium tuberculosis} PDB: 3pny_A 3pnv_A Back     alignment and structure
>1j09_A Glutamyl-tRNA synthetase; glurs-ATP-Glu complex, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLU ATP; 1.80A {Thermus thermophilus} SCOP: a.97.1.1 c.26.1.1 PDB: 1n75_A* 1n77_A* 1n78_A* 2cuz_A* 2cv0_A* 2cv1_A* 2cv2_A* 2dxi_A* 1g59_A 1gln_A Back     alignment and structure
>2cfo_A Glutamyl-tRNA synthetase; ligase, aminoacyl-tRNA synthetase, ATP-binding, nucleotide-B; HET: GLU; 2.45A {Synechococcus elongatus} Back     alignment and structure
>3afh_A Glutamyl-tRNA synthetase 2; protein-substrate complex, aminoacyl-tRNA synthetase, ATP-binding, ligase, nucleotide-binding; HET: GSU; 2.00A {Thermotoga maritima} PDB: 3akz_B* Back     alignment and structure
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate-T ligase 1, glurs 1, structural genomics, joint center for ST genomics, JCSG; 2.34A {Thermotoga maritima} Back     alignment and structure
>3al0_C Glutamyl-tRNA(Gln) amidotransferase subunit C, GL tRNA synthetase 2; protein-RNA complex, ligase-RNA complex; HET: GSU; 3.37A {Thermotoga maritima} Back     alignment and structure
>1nzj_A Hypothetical protein YADB; Zn cluster, glutamyl T-RNA synthetase, structural genomics, unknown function; 1.50A {Escherichia coli} SCOP: c.26.1.1 PDB: 2zlz_A* 4a91_A* Back     alignment and structure
>1irx_A Lysyl-tRNA synthetase; beta sandwitch, zinc-binding structure, rossmann fold, alpha-helix CAGE; 2.60A {Pyrococcus horikoshii} SCOP: a.97.1.2 c.26.1.1 Back     alignment and structure
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B Back     alignment and structure
>1iq0_A Arginyl-tRNA synthetase; riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; 2.30A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 Back     alignment and structure
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis} Back     alignment and structure
>2csx_A Methionyl-tRNA synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase/RNA complex; 2.70A {Aquifex aeolicus} PDB: 2ct8_A* Back     alignment and structure
>3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii} Back     alignment and structure
>3fnr_A Arginyl-tRNA synthetase; transferase, PSI-2, NYSGXRC, struc genomics, protein structure initiative; 2.20A {Campylobacter jejuni} Back     alignment and structure
>2d5b_A Methionyl-tRNA synthetase; rossmann fold, class 1A AARS, isomerase, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: a.27.1.1 c.26.1.1 PDB: 1woy_A 1a8h_A 2d54_A Back     alignment and structure
>2dlc_X Tyrosyl-tRNA synthetase, cytoplasmic; tyrrs, ligase-tRNA complex; HET: 2MG OMG M2G PSU 6IA 5MC 5MU 1MA YMP; 2.40A {Saccharomyces cerevisiae} Back     alignment and structure
>2cyb_A Tyrosyl-tRNA synthetase; rossmann-fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: TYR; 1.80A {Archaeoglobus fulgidus} Back     alignment and structure
>3sp1_A Cysteinyl-tRNA synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, LYME disease; HET: AMP; 2.55A {Borrelia burgdorferi} Back     alignment and structure
>3h99_A Methionyl-tRNA synthetase; rossmann fold, aminoacyl-tRNA synthetase, ATP-binding, ligas binding, nucleotide-binding, protein biosynthesis; HET: CIT; 1.40A {Escherichia coli} PDB: 3h97_A* 3h9b_A* 1f4l_A 3h9c_A* 1pfv_A* 1pfu_A 1p7p_A* 1pfw_A* 1pfy_A* 1pg0_A* 1pg2_A* 1qqt_A 1mea_A 1med_A Back     alignment and structure
>1n3l_A Tyrosyl-tRNA synthetase; rossmann fold AS catalytic domain, unique anticodon recognit domain, dimer, ligase; 1.18A {Homo sapiens} SCOP: c.26.1.1 PDB: 1q11_A* Back     alignment and structure
>1f7u_A Arginyl-tRNA synthetase; RNA-protein complex, aminoacylation; HET: PSU 1MG 2MG H2U M2G 5MC 5MU 1MA ARG; 2.20A {Saccharomyces cerevisiae} SCOP: a.27.1.1 c.26.1.1 d.67.2.1 PDB: 1bs2_A* 1f7v_A* Back     alignment and structure
>2x1l_A Methionyl-tRNA synthetase; nucleotide-binding, protein biosynthesis, ligase, aminoacyl- synthetase; HET: ADN CXS; 2.30A {Mycobacterium smegmatis} PDB: 2x1m_A* Back     alignment and structure
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} Back     alignment and structure
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A Back     alignment and structure
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major} Back     alignment and structure
>3u1f_A Methionyl-tRNA synthetase; aminoacyl-tRNA synthetase, AARS, metrs, parasite, protein-IN complex, rossmann-fold, translation; HET: 392; 2.20A {Trypanosoma brucei} PDB: 3u1e_A* 3u1g_A* 3u20_A* 4eg1_A 4eg3_A* 4eg6_A* 4eg8_A* 4eg5_A* 3tun_A* 3u1z_A* 4eg4_A* 4eg7_A* 4ega_A* Back     alignment and structure
>1rqg_A Methionyl-tRNA synthetase; translation, dimerization, ligase; 2.90A {Pyrococcus abyssi} SCOP: a.27.1.1 c.26.1.1 g.41.1.1 Back     alignment and structure
>2cya_A Tyrosyl-tRNA synthetase; tyrrs, aminoacylation, structural genomics, NPPSFA, national on protein structural and functional analyses; 2.20A {Aeropyrum pernix} Back     alignment and structure
>1ile_A Ilers, isoleucyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics; 2.50A {Thermus thermophilus} SCOP: a.27.1.1 b.51.1.1 c.26.1.1 PDB: 1jzq_A* 1jzs_A* Back     alignment and structure
>2g36_A Tryptophanyl-tRNA synthetase; TM0492, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI, ligase; HET: TRP; 2.50A {Thermotoga maritima} Back     alignment and structure
>2yy5_A Tryptophanyl-tRNA synthetase; aminoaccyl tRNA synthetase, structural genomics, NPPSFA; HET: WSA; 2.55A {Mycoplasma pneumoniae} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 462
d1gtra1209 b.53.1.2 (A:339-547) Gln-tRNA synthetase (GlnRS), 9e-58
d1gtra2331 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (Gln 5e-50
d1j09a2305 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS 3e-27
d1nzja_286 c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB 3e-16
>d1gtra1 b.53.1.2 (A:339-547) Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain {Escherichia coli [TaxId: 562]} Length = 209 Back     information, alignment and structure

class: All beta proteins
fold: Ribosomal protein L25-like
superfamily: Ribosomal protein L25-like
family: Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain
domain: Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain
species: Escherichia coli [TaxId: 562]

 Score =  187 bits (476), Expect = 9e-58
 Identities = 89/219 (40%), Positives = 124/219 (56%), Gaps = 18/219 (8%)

Query: 246 APRTMVVLNPLKVVITNMESGTIMHLDAKRWPDAQADDASAFYKVPFSNVVYIEHSDFRM 305
           APR M V++P+K+VI N + G    +     P+          +VPFS  ++I+ +DFR 
Sbjct: 1   APRAMAVIDPVKLVIENYQ-GEGEMVTMPNHPN---KPEMGSRQVPFSGEIWIDRADFRE 56

Query: 306 KDSKDYYGLAPGKSVLLRYAFPIKCTEVILSDDKETILHIRAEYDPSKKTK-------PK 358
           + +K Y  L  GK V LR A+ IK   V   D +  I  I   YD    +K        K
Sbjct: 57  EANKQYKRLVLGKEVRLRNAYVIKAERVE-KDAEGNITTIFCTYDADTLSKDPADGRKVK 115

Query: 359 GVLHWVAEPSPGVNPLRVEVRLFEKLFNSENPAELDDWLSDLNPDSKVVIPEAYAEPSLH 418
           GV+HWV+      + L VE+RL+++LF+  NP   DD+LS +NP+S V+  + +AEPSL 
Sbjct: 116 GVIHWVSAA----HALPVEIRLYDRLFSVPNPGAADDFLSVINPESLVIK-QGFAEPSLK 170

Query: 419 SAAVGDRFQFERLGYFAVD-KDSTPEKLVFNRTVTLKDS 456
            A  G  FQFER GYF +D + ST EK VFNRTV L+D+
Sbjct: 171 DAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDT 209
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]} Length = 331 Back     information, alignment and structure
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Length = 305 Back     information, alignment and structure
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} Length = 286 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query462
d1gtra2331 Glutaminyl-tRNA synthetase (GlnRS) {Escherichia co 100.0
d1gtra1209 Gln-tRNA synthetase (GlnRS), C-terminal (anticodon 100.0
d1j09a2305 Glutamyl-tRNA synthetase (GluRS) {Thermus thermoph 100.0
d1nzja_286 Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia c 100.0
d1irxa2317 Class I lysyl-tRNA synthetase {Archaeon Pyrococcus 97.05
d1li5a2315 Cysteinyl-tRNA synthetase (CysRS) {Escherichia col 96.47
d1pfva2350 Methionyl-tRNA synthetase (MetRS) {Escherichia col 96.1
d1ivsa4425 Valyl-tRNA synthetase (ValRS) {Thermus thermophilu 94.33
d1rqga2361 Methionyl-tRNA synthetase (MetRS) {Pyrococcus abys 92.84
d1ilea3452 Isoleucyl-tRNA synthetase (IleRS) {Thermus thermop 92.64
d2d5ba2348 Methionyl-tRNA synthetase (MetRS) {Thermus thermop 90.71
d1iq0a2370 Arginyl-tRNA synthetase (ArgRS) {Thermus thermophi 90.17
d1ffya3450 Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus 85.82
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Nucleotidylyl transferase
family: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
domain: Glutaminyl-tRNA synthetase (GlnRS)
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.5e-62  Score=492.99  Aligned_cols=244  Identities=52%  Similarity=0.882  Sum_probs=234.3

Q ss_pred             CCcccC-CceecccCHHHHHHHHHHHHhCCCeEEeCCCHHHHHHHhC----CCCCCCCCCCChhHHHHHHHHHhCCcccC
Q 012516            1 MGWEPF-KITYTSDYFQELYELAVELIRRGHAYVDHQTPEEIKEYRE----KKMNSPWRDRPIAESLKLFEDMRNGRIEE   75 (462)
Q Consensus         1 LGl~wD-~~~~QS~r~~~y~~~a~~Li~~G~AY~c~cs~eel~~~r~----~~~~~~~R~~~~ee~l~~~~~m~~G~~~~   75 (462)
                      |||+|| ++++||+|+++|+++|++|+++|+||+|+||+||+++.|+    +|.+++||....++++..|+.|..|....
T Consensus        81 LGl~wD~~~~~QS~r~~~Y~~~~~~L~~~G~aY~C~cs~eel~~~r~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (331)
T d1gtra2          81 LGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEE  160 (331)
T ss_dssp             TTCCCSSSCEEGGGGHHHHHHHHHHHHHTTSEEEECCCHHHHHHHTCCSSSCCCCCTTTTCCHHHHHHHHHHHHHTCSCT
T ss_pred             HhccccccceecchHHHHHHHHHHhhhhcCCcccccccHHHHHHHHhhhhccCCCCCCCCccccccHHHhhHHhhccccC
Confidence            799999 7999999999999999999999999999999999999987    67899999999999999999999998888


Q ss_pred             CceEEEEeecCCCCCCcCCCcEEEEEecCCCCCCCCccccccccceeeeeecCCCccceEeeccccccccHHHHHHHHHh
Q 012516           76 GKATLRMKQDMQNDNFNMYDLIAYRIKFTPHPHAGDKWCIYPSYDYAHCIVDSIENITHSLCTLEFETRRASYFWLLHAL  155 (462)
Q Consensus        76 ~~~~lR~K~d~~~~n~~~~D~Vi~R~~~~~h~~~gd~~~~~PtY~fA~~VDD~l~gITHviRg~e~l~~t~~q~~l~~aL  155 (462)
                      +..++|+++++.+++..++|+++++....+|..++.++.++|||||||||||++|||||||||+||++|||+|.+|+++|
T Consensus       161 ~~~~~r~~~~~~~~~~~~~d~~~~~~~~~~~d~v~~r~dg~ptY~lA~vVDD~~~gIThViRG~D~l~~T~~q~~l~~~L  240 (331)
T d1gtra2         161 GKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNI  240 (331)
T ss_dssp             TSCEEEECSCTTCSSGGGSSCEEEEECCCCBTTTBTSCSEEECHHHHHHHHHHHHTCSEEEEEGGGTTTHHHHHHHHHHS
T ss_pred             CceEEEEecccCCCceeEEccceeeeccCCCcccccccccccHHhhhHHHhhhhhcccceecccccccccHHHHHHHHhc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCeEEEEe-eecCCCcccccccccccccccccCCCCCchhhhHHHHHHcCCCHHHHHHHHHHcCccCCCccccHHHH
Q 012516          156 GLYQPYVWEYS-RLNVSNTVMSKRKLNFLVTNKYVDGWDDPCLMTLAGLRRRGVTSTSINAFVQGIGISRSDSLIRLDRL  234 (462)
Q Consensus       156 g~~~P~~~h~~-~l~~~g~kLSKR~~~~~v~~~~~~gwddPr~~ti~~lr~rG~~peAi~~f~~~lG~s~~~~~~~~~~l  234 (462)
                      ||+.|.++|.+ +++++|++||||++..+++++.+.||||||++||++||++||+|+||+|||++||||..++.+++..|
T Consensus       241 g~~~p~~~h~~~~l~~~g~~lskr~l~~~~~~~~~~~~dd~~~~sl~~lr~~G~~peai~nyla~LGws~~d~~~e~~sL  320 (331)
T d1gtra2         241 TIPVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASL  320 (331)
T ss_dssp             CCSCCCEEEEECCCCBTTSCCCHHHHHHHHHTTSSSSTTCTTSCBHHHHHHHTCCHHHHHHHHHHHCCCSSCCCBCHHHH
T ss_pred             cCCCCcceeeccccccccchhhhcccchhcccCccccccCCCcccHHHHHHCCCCHHHHHHHHHHhCCCCCCCcccHHhH
Confidence            99988777777 58999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhc
Q 012516          235 EYHIREELNK  244 (462)
Q Consensus       235 ~~~nr~~l~~  244 (462)
                      +.+||+.|++
T Consensus       321 e~~~r~~ln~  330 (331)
T d1gtra2         321 ESCIREDLNE  330 (331)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHhccC
Confidence            9999999986
>d1gtra1 b.53.1.2 (A:339-547) Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]} Back     information, alignment and structure
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure