Citrus Sinensis ID: 013424
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 443 | ||||||
| 441481999 | 541 | remorin-3 protein [Dimocarpus longan] | 0.990 | 0.811 | 0.750 | 0.0 | |
| 255584507 | 535 | DNA binding protein, putative [Ricinus c | 0.975 | 0.807 | 0.673 | 1e-167 | |
| 225443950 | 526 | PREDICTED: uncharacterized protein LOC10 | 0.963 | 0.811 | 0.664 | 1e-159 | |
| 147838010 | 585 | hypothetical protein VITISV_036630 [Viti | 0.963 | 0.729 | 0.662 | 1e-157 | |
| 356525106 | 540 | PREDICTED: uncharacterized protein LOC10 | 0.986 | 0.809 | 0.649 | 1e-157 | |
| 356526393 | 540 | PREDICTED: uncharacterized protein LOC10 | 0.986 | 0.809 | 0.649 | 1e-156 | |
| 356512331 | 540 | PREDICTED: uncharacterized protein LOC10 | 0.986 | 0.809 | 0.643 | 1e-155 | |
| 449433601 | 537 | PREDICTED: uncharacterized protein LOC10 | 0.981 | 0.810 | 0.617 | 1e-141 | |
| 224061059 | 528 | predicted protein [Populus trichocarpa] | 0.957 | 0.803 | 0.601 | 1e-141 | |
| 15220725 | 509 | Remorin family protein [Arabidopsis thal | 0.884 | 0.770 | 0.529 | 1e-108 |
| >gi|441481999|gb|AGC39094.1| remorin-3 protein [Dimocarpus longan] | Back alignment and taxonomy information |
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Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/449 (75%), Positives = 379/449 (84%), Gaps = 10/449 (2%)
Query: 1 MEYERIHKAQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLL-- 58
M+YERIHK QTGIISPSKLRMKLIGPH NRKK+GSNSNS+RTSP++LDDSEFVRNSLL
Sbjct: 1 MDYERIHKVQTGIISPSKLRMKLIGPH-NRKKEGSNSNSSRTSPAKLDDSEFVRNSLLAS 59
Query: 59 NGG-FDDE--APSLEVASEKGAGEVVLGHNQG-EQASFQPNETLPRENTEVSRVKMQQFS 114
NGG FD+E APSL+VASEK EVVL +NQG +QAS Q E +PRE+ +V R KMQ F
Sbjct: 60 NGGDFDEEVAAPSLDVASEKAGREVVLDNNQGGDQASCQLKEAMPRESADVGRSKMQ-FL 118
Query: 115 KGDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARSFSRPMPSKWNDA 174
K DS N +AIHPMR+ ED+NLDYDSNASSSSFEFHKGERS+ N +ARSFSRPMPSKWNDA
Sbjct: 119 KVDSGNSNAIHPMRVFEDENLDYDSNASSSSFEFHKGERSVHNSIARSFSRPMPSKWNDA 178
Query: 175 EKWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDFC 234
EKWIMN+Q QAN+ KK AL+NQ NRLP TNMVRVVPE+ TYDHKPS RAADTKRVDFC
Sbjct: 179 EKWIMNKQNAQANHPKKIALYNQTNRLPQTNMVRVVPEHVTYDHKPSMARAADTKRVDFC 238
Query: 235 QTASH-TLEKFSFVPSGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPA 293
Q S EKFSF+P GTHQA+GGNA++D+ TQSKD ++V Q D+ CTK S+E+ SVVPA
Sbjct: 239 QPVSQGAFEKFSFIPPGTHQAYGGNALVDTYTQSKDTKDVGQQDLSCTKISTEDTSVVPA 298
Query: 294 IRSVCMRDMGTEMTPVASQEPSRTATPVGATTPLRSPTSSIPSTPRGRAPASTPMEQTGI 353
IRSV MRDMGTEMTPVASQEPSRTATPVGATTPLRSP SSIPSTPR APASTP++ T
Sbjct: 299 IRSVSMRDMGTEMTPVASQEPSRTATPVGATTPLRSPASSIPSTPRRGAPASTPVDNTTD 358
Query: 354 DESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAAWASKDEQ-GKNTSSAEKNS 412
DESQ PVEN +R L++QE+KEKTRREIVALGVQLGKMNIAAWASK+EQ KN + + +
Sbjct: 359 DESQCPVENIRRVLTDQEMKEKTRREIVALGVQLGKMNIAAWASKEEQENKNDNPSAETV 418
Query: 413 DMEELERIEYEKRASAWAEAEKSKHIARF 441
DMEELERIEYE RA+AW EAEKSKH ARF
Sbjct: 419 DMEELERIEYENRAAAWEEAEKSKHTARF 447
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Source: Dimocarpus longan Species: Dimocarpus longan Genus: Dimocarpus Family: Sapindaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255584507|ref|XP_002532982.1| DNA binding protein, putative [Ricinus communis] gi|223527246|gb|EEF29406.1| DNA binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|225443950|ref|XP_002272255.1| PREDICTED: uncharacterized protein LOC100256651 [Vitis vinifera] gi|297740766|emb|CBI30948.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147838010|emb|CAN71634.1| hypothetical protein VITISV_036630 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356525106|ref|XP_003531168.1| PREDICTED: uncharacterized protein LOC100805128 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356526393|ref|XP_003531802.1| PREDICTED: uncharacterized protein LOC100790482 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356512331|ref|XP_003524873.1| PREDICTED: uncharacterized protein LOC100787239 [Glycine max] | Back alignment and taxonomy information |
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| >gi|449433601|ref|XP_004134586.1| PREDICTED: uncharacterized protein LOC101217408 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|224061059|ref|XP_002300338.1| predicted protein [Populus trichocarpa] gi|222847596|gb|EEE85143.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|15220725|ref|NP_174322.1| Remorin family protein [Arabidopsis thaliana] gi|12322121|gb|AAG51095.1|AC025295_3 hypothetical protein [Arabidopsis thaliana] gi|26452636|dbj|BAC43401.1| unknown protein [Arabidopsis thaliana] gi|29824297|gb|AAP04109.1| unknown protein [Arabidopsis thaliana] gi|332193084|gb|AEE31205.1| Remorin family protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 443 | ||||||
| TAIR|locus:2204197 | 509 | AT1G30320 "AT1G30320" [Arabido | 0.909 | 0.791 | 0.433 | 6.1e-71 | |
| TAIR|locus:2051673 | 486 | AT2G02170 "AT2G02170" [Arabido | 0.652 | 0.594 | 0.361 | 1.8e-46 | |
| TAIR|locus:2008625 | 347 | AT1G67590 "AT1G67590" [Arabido | 0.365 | 0.466 | 0.305 | 1.1e-15 |
| TAIR|locus:2204197 AT1G30320 "AT1G30320" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 718 (257.8 bits), Expect = 6.1e-71, P = 6.1e-71
Identities = 201/464 (43%), Positives = 264/464 (56%)
Query: 1 MEYERIHKAQTGIISPSKLRMKLIGPHHNRKKDGS--NSNSARTSPSRL---DDSEFVRN 55
M+YERI K Q IISP+KLRMKL+GP +N K++GS NSNS+RTSPSRL DDSEF +N
Sbjct: 1 MDYERIQKVQKSIISPTKLRMKLMGPLNNMKREGSKSNSNSSRTSPSRLQIPDDSEFSKN 60
Query: 56 SLL--NGGFDDE--APSLEVASEKGAGEVVLGHNQGE-QASFQPNE-TLPRENTEVSRVK 109
SLL N DD+ A + ++ K E VL + + Q S E +PREN + +
Sbjct: 61 SLLASNSYSDDDVAATTTDIEVAKLPNEPVLYPTENDNQGSKDRCEGVVPRENDQP---R 117
Query: 110 MQQFSKGDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHK--GERSMQNHMARSF-SRP 166
+QQF KGD +N+++ H MR ED+NLDYDSNASSSSFEFH+ GERS QNH +R + SR
Sbjct: 118 LQQFRKGD-LNMASPHIMRPQEDENLDYDSNASSSSFEFHRARGERSNQNHGSRGYPSRQ 176
Query: 167 MPSKWNDAEKWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAA 226
MPSKWNDAEKWIM+RQ + +KN Q NR+P VR+VP+ Y+H S
Sbjct: 177 MPSKWNDAEKWIMSRQNM---VMRKNG---QGNRIP----VRIVPDNAGYEHNKS----- 221
Query: 227 DTKRVDFCQTAS-HTLEKF-SFVPSGTH----QAHGGNAMIDSCTQSKDLEEVIQTDVPC 280
R+D CQ++ EKF + VPS H Q +GG+++ID TQS DL +
Sbjct: 222 ---RMDLCQSSQVDGFEKFPNVVPSAPHPILTQEYGGDSLIDQSTQSNDLAD-------- 270
Query: 281 TKSSSENESVVPAIRSVCMRDMGTEMTPVASQEPSRTATPVGAXXXXXXXXXXXXXXXRG 340
SS ++ + PAIRSVCMRDMGTEMTP+ SQEPSR+ TPVGA RG
Sbjct: 271 --SSHDHTTGGPAIRSVCMRDMGTEMTPIPSQEPSRSVTPVGATTPLRSPTSSLPSTPRG 328
Query: 341 RAPASTPMEQTGIDESQHPVENSK--RDLSEQEIKEKTRREIVALGV---QLGKMNI--A 393
P + M + E E +K R++ + + + I A + K N A
Sbjct: 329 GQPEESSMSKNTRRELSEEEEKAKTRREIVALGV-QLGKMNIAAWASKEEEENKKNNGDA 387
Query: 394 AWASKDEQGKNTSSAEKNSDMEELERIEYEK-RASAWAEAEKSK 436
A K E K ++ E+ + R + E+ R AW EK+K
Sbjct: 388 EEAQKIEFEKRATAWEEAEKSKHNARYKREEIRIQAWESQEKAK 431
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| TAIR|locus:2051673 AT2G02170 "AT2G02170" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2008625 AT1G67590 "AT1G67590" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
No hit with probability above 80.00
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 443 | |||
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-04 |
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
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Score = 42.5 bits (99), Expect = 2e-04
Identities = 66/474 (13%), Positives = 122/474 (25%), Gaps = 161/474 (33%)
Query: 3 YERIHKAQTGIISPSKLRMKLIGPHHNRKKDGSNSNSARTSPSRLDDSEFVRNSLLNGGF 62
I Q PS + ++ +R + + + RL +R +LL
Sbjct: 95 MSPIKTEQ---RQPS-MMTRMYIEQRDRLYNDNQVFAKYNVS-RLQPYLKLRQALLE--- 146
Query: 63 DDEAPSLEVASEKGAGEVVLG----HNQGEQASFQPNE----TLPRENTEVSRVKMQQFS 114
A ++ + G+G+ + + Q + L N+ + ++M Q
Sbjct: 147 LRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKM-DFKIFWLNLKNCNSPETVLEMLQ-- 203
Query: 115 KGDSVNLSAIHPMRMHEDDNLDYDSNASSSSFEFHKGERSMQNHMARS-FSRPMPSKWND 173
L Y + N +RS S + + +
Sbjct: 204 -------------------KLLY---------------QIDPNWTSRSDHSSNIKLRIHS 229
Query: 174 AEKWIMNRQIIQANYAKKNALHNQANRLPATNMVRVVPEYGTYDHKPSTVRAADTKRVDF 233
+ + R + Y +N L L V+ + V+ + K
Sbjct: 230 IQAEL-RRLLKSKPY--ENCL------L-------VL------LN----VQ--NAK---- 257
Query: 234 CQTASHTLEKFSFVPSGTHQAHGGNAMIDSCTQSKDLEEVIQTDVPCTKSSSENESVVPA 293
F+ SC ++ T T+ + + A
Sbjct: 258 ------AWNAFNL----------------SCK-------ILLT----TRFKQVTDFLSAA 284
Query: 294 IRS-VCMRDMGTEMTPVASQE-------------PSRTATPVGATTPLRSPTSSIPSTPR 339
+ + + +TP + P T T P R S I + R
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLT----TNPRR--LSIIAESIR 338
Query: 340 GRAPASTPMEQTGIDESQHPVENSKRDLSEQEIKEKTRREIVALGVQLGKMNIAA----- 394
+ D+ +E+S L E R+ L V +I
Sbjct: 339 DGLATWDNWKHVNCDKLTTIIESSLNVLEPAEY----RKMFDRLSVFPPSAHIPTILLSL 394
Query: 395 -WASKDEQG--------KNTSSAEKNSDME--ELERIEYEKRASAWAEAEKSKH 437
W + S EK + I E + E E + H
Sbjct: 395 IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVK--LENEYALH 446
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Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
No hit with probability above 80.00