Citrus Sinensis ID: 014581

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420--
MASLNLNQIISNSNTSFAVNRRPGLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLSMVSN
cccccEEEEccccccccEEccccccccccccccccccccccccccccEEEEcccccccccccccccccccHHHHHHHHHccccEEEEEccccccccccccccEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHccccccEEEEccccccccccccccccccccHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHccccEEEEEcccccccEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHHcccHHHHccEEcccccHHHHHHHHHHHHHHHHccccccccHHccccccccccccccccccccccHHHHcccccccccccccccccccccccccc
cccEccEEccccHHHHHcccccccccccccccccccccccccccccccEEEccEEEcccEEEcccHHHccHHHHHHHHHHcccEEEcccEccHHHccccccccEEEEcccccccccccEEcEcEccccccccHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHccccEEEEEccccccHHHHcccHHHHHcHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHcccEEEEcccEEEcccEccccccccccccccccccccccHcHHHHHHHHHHHHHHHcccccccccccEEEEcccccHHHHHHHHHHccccEEHHHHHHHccccHHHHHHHHHHHHHHHcccccHHHHcccccccccccccccEEEEEcccHHHHHcccccccccccccccEEEccccccc
maslnlnqiisnsntsfavnrrpglrlpsriglrvlasdsasaepdlsitvnglqmpnpfvigsgppgtnytVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARlragangsakgqiIGWEnielisdrPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDaievnfscphgmperkmgaavgqDCRLLEEVCGwinakatvpvwakmtpnitditepARVALRSGSEGVSAINTIMSVMGidlktlrpepcvegystpggysckavhpialGKVMSIAKMMKsefndkdyslsgiggvetggDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGlqsdkdwtgdgfVKETLSMVSN
maslnlnqiisnsntsfavnrrpglrLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVsldaakvinvTPRYARLRagangsakgqiigWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKatvpvwakmtpniTDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKglqsdkdwtgdgfvketlsmvsn
MAslnlnqiisnsntsFAVNRRPGLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLSMVSN
******************************IGLRV*************ITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQ***********************************
***LN*N*IISNSNTSFAVNRRPG****************ASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKE*LS****
MASLNLNQIISNSNTSFAVNRRPGLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQ***************DKDWTGDGFVKETLSMVSN
***LNLNQIISNSNTSFAVNRRPGLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETL*****
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MASLNLNQIISNSNTSFAVNRRPGLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLSMVSN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query422 2.2.26 [Sep-21-2011]
Q8X643413 NAD-dependent dihydropyri N/A no 0.741 0.757 0.444 1e-68
P25889411 NAD-dependent dihydropyri N/A no 0.741 0.761 0.444 2e-68
Q8ZNL7411 NAD-dependent dihydropyri yes no 0.741 0.761 0.435 5e-67
Q8CHR6 1025 Dihydropyrimidine dehydro yes no 0.748 0.308 0.380 1e-60
Q12882 1025 Dihydropyrimidine dehydro yes no 0.748 0.308 0.374 1e-60
Q5R895 1025 Dihydropyrimidine dehydro yes no 0.748 0.308 0.371 5e-60
O89000 1025 Dihydropyrimidine dehydro yes no 0.746 0.307 0.379 9e-60
Q6NYG8 1022 Dihydropyrimidine dehydro yes no 0.746 0.308 0.364 1e-59
Q18164 1059 Dihydropyrimidine dehydro yes no 0.753 0.300 0.383 2e-59
Q28943 1025 Dihydropyrimidine dehydro yes no 0.746 0.307 0.373 6e-59
>sp|Q8X643|PREA_ECO57 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS=Escherichia coli O157:H7 GN=preA PE=3 SV=1 Back     alignment and function desciption
 Score =  260 bits (665), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 145/326 (44%), Positives = 198/326 (60%), Gaps = 13/326 (3%)

Query: 46  DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
           DLSIT  G++ PNPF + S P G  Y +  +A+D GWG VV KT+    A    V+PR+ 
Sbjct: 7   DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFD 64

Query: 106 RLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAW 165
            L     G      IG++N+E I++ PLE  L   ++LK  YPDK+LIASIM E N+  W
Sbjct: 65  HLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQW 118

Query: 166 EELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKM 225
           EEL   V+E G D IE NFSCP  M    MG+ VGQ   L+E+ C  +   +T+P+ AKM
Sbjct: 119 EELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYCRAVKRGSTLPMLAKM 177

Query: 226 TPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVH 285
           TPNI D+ E A  A R G++G++AINT+ S+  IDL      P V G S+  GYS KAV 
Sbjct: 178 TPNIGDMCEVALAAKRGGADGIAAINTVKSITNIDLNQKIGMPIVNGKSSISGYSGKAVK 237

Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
           PIAL       + M++    +D+ +SGIGG+ET  DAAEF+LLGA T+QV TG+M +GY 
Sbjct: 238 PIAL----RFIQQMRTHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYR 293

Query: 346 LVKRLCEELKDFMKMHNFSSIEDFRG 371
           +V+ +   L  ++    F S+++  G
Sbjct: 294 IVEDMASGLSHYLADQGFDSLQEMVG 319
Involved in pyrimidine base degradation. Catalyzes physiologically the reduction of uracil to 5,6-dihydrouracil (DHU) by using NADH as a specific cosubstrate. It also catalyzes the reverse reaction and the reduction of thymine to 5,6-dihydrothymine (DHT).
Escherichia coli O157:H7 (taxid: 83334)
EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 1
>sp|P25889|PREA_ECOLI NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS=Escherichia coli (strain K12) GN=preA PE=1 SV=3 Back     alignment and function description
>sp|Q8ZNL7|PREA_SALTY NAD-dependent dihydropyrimidine dehydrogenase subunit PreA OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=preA PE=3 SV=1 Back     alignment and function description
>sp|Q8CHR6|DPYD_MOUSE Dihydropyrimidine dehydrogenase [NADP(+)] OS=Mus musculus GN=Dpyd PE=2 SV=1 Back     alignment and function description
>sp|Q12882|DPYD_HUMAN Dihydropyrimidine dehydrogenase [NADP(+)] OS=Homo sapiens GN=DPYD PE=1 SV=2 Back     alignment and function description
>sp|Q5R895|DPYD_PONAB Dihydropyrimidine dehydrogenase [NADP(+)] OS=Pongo abelii GN=DPYD PE=2 SV=1 Back     alignment and function description
>sp|O89000|DPYD_RAT Dihydropyrimidine dehydrogenase [NADP(+)] OS=Rattus norvegicus GN=Dpyd PE=2 SV=1 Back     alignment and function description
>sp|Q6NYG8|DPYD_DANRE Dihydropyrimidine dehydrogenase [NADP(+)] OS=Danio rerio GN=dpyd PE=2 SV=1 Back     alignment and function description
>sp|Q18164|DPYD_CAEEL Dihydropyrimidine dehydrogenase [NADP(+)] OS=Caenorhabditis elegans GN=dpyd-1 PE=3 SV=2 Back     alignment and function description
>sp|Q28943|DPYD_PIG Dihydropyrimidine dehydrogenase [NADP(+)] OS=Sus scrofa GN=DPYD PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query422
449439483424 PREDICTED: NAD-dependent dihydropyrimidi 1.0 0.995 0.853 0.0
225456230421 PREDICTED: NAD-dependent dihydropyrimidi 0.995 0.997 0.862 0.0
224125864425 predicted protein [Populus trichocarpa] 1.0 0.992 0.863 0.0
147770516401 hypothetical protein VITISV_038955 [Viti 0.947 0.997 0.885 0.0
356520655424 PREDICTED: NAD-dependent dihydropyrimidi 1.0 0.995 0.827 0.0
255586410429 dihydroorotate dehydrogenase, putative [ 1.0 0.983 0.839 0.0
6177796424 JPR ORF1 [Pyrus pyrifolia] 0.997 0.992 0.84 0.0
358249226424 uncharacterized protein LOC100804632 [Gl 1.0 0.995 0.825 0.0
357499179424 Dihydropyrimidine dehydrogenase [Medicag 1.0 0.995 0.827 0.0
217072368424 unknown [Medicago truncatula] 1.0 0.995 0.823 0.0
>gi|449439483|ref|XP_004137515.1| PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit PreA-like [Cucumis sativus] gi|449520940|ref|XP_004167490.1| PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit PreA-like [Cucumis sativus] Back     alignment and taxonomy information
 Score =  759 bits (1961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/424 (85%), Positives = 393/424 (92%), Gaps = 2/424 (0%)

Query: 1   MASLNLNQIISNSN-TSFAVN-RRPGLRLPSRIGLRVLASDSASAEPDLSITVNGLQMPN 58
           MAS NL Q  + S  T+ A+N  R GL  P+R+G RV+AS  A AEPDLS+TVNGL MPN
Sbjct: 1   MASFNLTQFRTKSPITNLALNPSRTGLTRPTRLGFRVVASGGAQAEPDLSVTVNGLNMPN 60

Query: 59  PFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQ 118
           PFVIGSGPPGTNYTVMKRAFDEGWGAV+AKTVSLDAAKVINVTPRYARLRA +NGSAKGQ
Sbjct: 61  PFVIGSGPPGTNYTVMKRAFDEGWGAVIAKTVSLDAAKVINVTPRYARLRADSNGSAKGQ 120

Query: 119 IIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGID 178
           IIGWENIELISDRPLE MLKEFKQLK  YPD+ILIASIMEEYNKAAWEELIDRVE+TG+D
Sbjct: 121 IIGWENIELISDRPLEIMLKEFKQLKEEYPDRILIASIMEEYNKAAWEELIDRVEQTGVD 180

Query: 179 AIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARV 238
           A E+NFSCPHGMPER+MGAAVGQDC LLEEVCGWINAKAT+PVWAKMTPNITDI++PARV
Sbjct: 181 AFEINFSCPHGMPERRMGAAVGQDCALLEEVCGWINAKATIPVWAKMTPNITDISQPARV 240

Query: 239 ALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCKAVHPIALGKVMSIAKM 298
           AL+SG EG++AINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS KAVHPIALGKV+SIAKM
Sbjct: 241 ALKSGCEGIAAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSSKAVHPIALGKVLSIAKM 300

Query: 299 MKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFM 358
           MK+EFND DYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG+VK+LC EL+DFM
Sbjct: 301 MKAEFNDGDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGVVKKLCAELQDFM 360

Query: 359 KMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLS 418
           K+HNFSSIEDFRGAS+ YFTTHT+LVR Q+EAI+QRKAV+KGLQSDKDWTGDGFVKET S
Sbjct: 361 KLHNFSSIEDFRGASLPYFTTHTDLVRRQREAIEQRKAVKKGLQSDKDWTGDGFVKETES 420

Query: 419 MVSN 422
           MVSN
Sbjct: 421 MVSN 424

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225456230|ref|XP_002283095.1| PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit PreA [Vitis vinifera] Back     alignment and taxonomy information
>gi|224125864|ref|XP_002329736.1| predicted protein [Populus trichocarpa] gi|222870644|gb|EEF07775.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147770516|emb|CAN75682.1| hypothetical protein VITISV_038955 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356520655|ref|XP_003528976.1| PREDICTED: NAD-dependent dihydropyrimidine dehydrogenase subunit PreA-like [Glycine max] Back     alignment and taxonomy information
>gi|255586410|ref|XP_002533851.1| dihydroorotate dehydrogenase, putative [Ricinus communis] gi|223526209|gb|EEF28534.1| dihydroorotate dehydrogenase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|6177796|dbj|BAA86060.1| JPR ORF1 [Pyrus pyrifolia] Back     alignment and taxonomy information
>gi|358249226|ref|NP_001239758.1| uncharacterized protein LOC100804632 [Glycine max] gi|255646113|gb|ACU23543.1| unknown [Glycine max] Back     alignment and taxonomy information
>gi|357499179|ref|XP_003619878.1| Dihydropyrimidine dehydrogenase [Medicago truncatula] gi|355494893|gb|AES76096.1| Dihydropyrimidine dehydrogenase [Medicago truncatula] Back     alignment and taxonomy information
>gi|217072368|gb|ACJ84544.1| unknown [Medicago truncatula] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query422
TAIR|locus:2088570426 PYD1 "pyrimidine 1" [Arabidops 0.928 0.920 0.822 7e-180
TIGR_CMR|SPO_1777434 SPO_1777 "dihydroorotate dehyd 0.819 0.797 0.424 1.7e-68
UNIPROTKB|Q4KDN0424 PFL_2546 "Dihydroorotate dehyd 0.753 0.75 0.448 1.3e-66
UNIPROTKB|P25889411 preA "NADH-dependent dihydropy 0.741 0.761 0.444 1.8e-64
UNIPROTKB|Q8X643413 preA "NAD-dependent dihydropyr 0.741 0.757 0.444 1.8e-64
UNIPROTKB|Q8ZNL7411 preA "NAD-dependent dihydropyr 0.741 0.761 0.435 7.6e-64
UNIPROTKB|F1M412 950 F1M412 "Uncharacterized protei 0.758 0.336 0.387 2.3e-59
UNIPROTKB|E1C4J1 950 DPYD "Uncharacterized protein" 0.753 0.334 0.382 6.4e-59
UNIPROTKB|E1BRA0 951 DPYD "Uncharacterized protein" 0.753 0.334 0.382 6.5e-59
MGI|MGI:2139667 1025 Dpyd "dihydropyrimidine dehydr 0.760 0.313 0.382 1.3e-58
TAIR|locus:2088570 PYD1 "pyrimidine 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1746 (619.7 bits), Expect = 7.0e-180, P = 7.0e-180
 Identities = 325/395 (82%), Positives = 369/395 (93%)

Query:    28 PSRIGLRVLASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVA 87
             P+R+GL++  S +A +EPDLS+TVNGL+MPNPFVIGSGPPGTNYTVMKRAFDEGWGAV+A
Sbjct:    35 PTRVGLKI--SSAAESEPDLSVTVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVIA 92

Query:    88 KTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALY 147
             KTVSLDA+KVINVTPRYARLR G+NGSAK  +IGW+NIELISDRPLETMLKEF++LK  Y
Sbjct:    93 KTVSLDASKVINVTPRYARLRTGSNGSAKTDVIGWQNIELISDRPLETMLKEFERLKKEY 152

Query:   148 PDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLE 207
             PD+ILIAS+MEEYNK AWEELIDRVE+TG+DA+E+NFSCPHGMPER+MGAAVGQDC LL+
Sbjct:   153 PDRILIASVMEEYNKTAWEELIDRVEQTGVDALEINFSCPHGMPERRMGAAVGQDCALLD 212

Query:   208 EVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPE 267
             EVCGWINAKATVPVWAKMTPNITDITEPARV+L+SG EG++AINTIMSVMGID+KTLRPE
Sbjct:   213 EVCGWINAKATVPVWAKMTPNITDITEPARVSLKSGCEGIAAINTIMSVMGIDMKTLRPE 272

Query:   268 PCVEGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFIL 327
             PCVEGYSTPGGYS KAV PIAL KVM+IAKMMKSEF++ D SLSGIGGVETG DAAEFIL
Sbjct:   273 PCVEGYSTPGGYSYKAVRPIALAKVMNIAKMMKSEFSE-DRSLSGIGGVETGYDAAEFIL 331

Query:   328 LGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQ 387
             LG+NTVQVCTGVMMHGYG VK LC ELKDFMK HNFS+IE+FRG S++YFTTHT+LV+ Q
Sbjct:   332 LGSNTVQVCTGVMMHGYGHVKTLCAELKDFMKQHNFSTIEEFRGHSLQYFTTHTDLVKRQ 391

Query:   388 QEAIQQRKAVRKGLQSDKDWTGDGFVKETLSMVSN 422
             +EA++QRKA ++GL+SDKDWTGDGFVKET SMVSN
Sbjct:   392 KEAVEQRKAEKRGLKSDKDWTGDGFVKETESMVSN 426
GO:0003824 "catalytic activity" evidence=IEA
GO:0004152 "dihydroorotate dehydrogenase activity" evidence=IEA
GO:0004158 "dihydroorotate oxidase activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=IEA
GO:0005886 "plasma membrane" evidence=ISM
GO:0006207 "'de novo' pyrimidine nucleobase biosynthetic process" evidence=ISS
GO:0006222 "UMP biosynthetic process" evidence=IEA
GO:0016627 "oxidoreductase activity, acting on the CH-CH group of donors" evidence=ISS
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0009507 "chloroplast" evidence=IDA
GO:0006212 "uracil catabolic process" evidence=IMP
GO:0009536 "plastid" evidence=IDA
GO:0017113 "dihydropyrimidine dehydrogenase (NADP+) activity" evidence=IMP
GO:0043562 "cellular response to nitrogen levels" evidence=IEP
GO:0009570 "chloroplast stroma" evidence=IDA
TIGR_CMR|SPO_1777 SPO_1777 "dihydroorotate dehydrogenase family protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
UNIPROTKB|Q4KDN0 PFL_2546 "Dihydroorotate dehydrogenase family/4Fe-4S binding domain protein" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
UNIPROTKB|P25889 preA "NADH-dependent dihydropyrimidine dehydrogenase subunit" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
UNIPROTKB|Q8X643 preA "NAD-dependent dihydropyrimidine dehydrogenase subunit PreA" [Escherichia coli O157:H7 (taxid:83334)] Back     alignment and assigned GO terms
UNIPROTKB|Q8ZNL7 preA "NAD-dependent dihydropyrimidine dehydrogenase subunit PreA" [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (taxid:99287)] Back     alignment and assigned GO terms
UNIPROTKB|F1M412 F1M412 "Uncharacterized protein" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1C4J1 DPYD "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|E1BRA0 DPYD "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
MGI|MGI:2139667 Dpyd "dihydropyrimidine dehydrogenase" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query422
PLN02495385 PLN02495, PLN02495, oxidoreductase, acting on the 0.0
cd02940299 cd02940, DHPD_FMN, Dihydropyrimidine dehydrogenase 1e-172
PRK08318420 PRK08318, PRK08318, dihydropyrimidine dehydrogenas 1e-136
COG0167310 COG0167, PyrD, Dihydroorotate dehydrogenase [Nucle 1e-83
cd04740296 cd04740, DHOD_1B_like, Dihydroorotate dehydrogenas 2e-62
PRK07259301 PRK07259, PRK07259, dihydroorotate dehydrogenase 1 2e-58
cd02810289 cd02810, DHOD_DHPD_FMN, Dihydroorotate dehydrogena 2e-53
TIGR01037300 TIGR01037, pyrD_sub1_fam, dihydroorotate dehydroge 4e-51
pfam01180290 pfam01180, DHO_dh, Dihydroorotate dehydrogenase 1e-32
cd04739325 cd04739, DHOD_like, Dihydroorotate dehydrogenase ( 1e-23
PRK02506310 PRK02506, PRK02506, dihydroorotate dehydrogenase 1 3e-22
cd04741294 cd04741, DHOD_1A_like, Dihydroorotate dehydrogenas 9e-22
PRK07565334 PRK07565, PRK07565, dihydroorotate dehydrogenase 2 7e-20
cd04738327 cd04738, DHOD_2_like, Dihydroorotate dehydrogenase 4e-14
PRK05286344 PRK05286, PRK05286, dihydroorotate dehydrogenase 2 5e-11
TIGR01036336 TIGR01036, pyrD_sub2, dihydroorotate dehydrogenase 2e-10
PLN02826409 PLN02826, PLN02826, dihydroorotate dehydrogenase 6e-08
cd04722200 cd04722, TIM_phosphate_binding, TIM barrel protein 4e-04
>gnl|CDD|215273 PLN02495, PLN02495, oxidoreductase, acting on the CH-CH group of donors Back     alignment and domain information 
 Score =  790 bits (2041), Expect = 0.0
 Identities = 330/383 (86%), Positives = 359/383 (93%), Gaps = 1/383 (0%)

Query: 40  SASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVIN 99
            A++EPDLS+TVNGL+MPNPFVIGSGPPGTNYTVMKRAFDEGWG V+AKTVSLDA+KVIN
Sbjct: 4   LAASEPDLSVTVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDASKVIN 63

Query: 100 VTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEE 159
           VTPRYARLRAGANGSAKG++IGW+NIELISDRP ETML EFKQLK  YPD+ILIASIMEE
Sbjct: 64  VTPRYARLRAGANGSAKGRVIGWQNIELISDRPFETMLAEFKQLKEEYPDRILIASIMEE 123

Query: 160 YNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATV 219
           YNK AWEE+I+RVEETG+DA+E+NFSCPHGMPERKMGAAVGQDC LLEEVCGWINAKATV
Sbjct: 124 YNKDAWEEIIERVEETGVDALEINFSCPHGMPERKMGAAVGQDCDLLEEVCGWINAKATV 183

Query: 220 PVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGY 279
           PVWAKMTPNITDIT+PARVAL+SG EGV+AINTIMSVMGI+L TLRPEPCVEGYSTPGGY
Sbjct: 184 PVWAKMTPNITDITQPARVALKSGCEGVAAINTIMSVMGINLDTLRPEPCVEGYSTPGGY 243

Query: 280 SCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGV 339
           S KAV PIAL KVM+IAKMMKSEF + D SLSGIGGVETGGDAAEFILLGA+TVQVCTGV
Sbjct: 244 SSKAVRPIALAKVMAIAKMMKSEFPE-DRSLSGIGGVETGGDAAEFILLGADTVQVCTGV 302

Query: 340 MMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRK 399
           MMHGY LVK LC EL+DFMK HNFSSIEDFRGAS+ YFTTHT+LV+ Q+EAI+QRKA+RK
Sbjct: 303 MMHGYPLVKNLCAELQDFMKKHNFSSIEDFRGASLPYFTTHTDLVQRQKEAIRQRKAIRK 362

Query: 400 GLQSDKDWTGDGFVKETLSMVSN 422
           GL SDKDWTGDGFVKET SMVSN
Sbjct: 363 GLASDKDWTGDGFVKETESMVSN 385

Length = 385
>gnl|CDD|239244 cd02940, DHPD_FMN, Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>gnl|CDD|236237 PRK08318, PRK08318, dihydropyrimidine dehydrogenase subunit B; Validated Back     alignment and domain information
>gnl|CDD|223245 COG0167, PyrD, Dihydroorotate dehydrogenase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|240091 cd04740, DHOD_1B_like, Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain Back     alignment and domain information
>gnl|CDD|235982 PRK07259, PRK07259, dihydroorotate dehydrogenase 1B; Reviewed Back     alignment and domain information
>gnl|CDD|239204 cd02810, DHOD_DHPD_FMN, Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>gnl|CDD|130109 TIGR01037, pyrD_sub1_fam, dihydroorotate dehydrogenase (subfamily 1) family protein Back     alignment and domain information
>gnl|CDD|216348 pfam01180, DHO_dh, Dihydroorotate dehydrogenase Back     alignment and domain information
>gnl|CDD|240090 cd04739, DHOD_like, Dihydroorotate dehydrogenase (DHOD) like proteins Back     alignment and domain information
>gnl|CDD|235045 PRK02506, PRK02506, dihydroorotate dehydrogenase 1A; Reviewed Back     alignment and domain information
>gnl|CDD|240092 cd04741, DHOD_1A_like, Dihydroorotate dehydrogenase (DHOD) class 1A FMN-binding domain Back     alignment and domain information
>gnl|CDD|236051 PRK07565, PRK07565, dihydroorotate dehydrogenase 2; Reviewed Back     alignment and domain information
>gnl|CDD|240089 cd04738, DHOD_2_like, Dihydroorotate dehydrogenase (DHOD) class 2 Back     alignment and domain information
>gnl|CDD|235388 PRK05286, PRK05286, dihydroorotate dehydrogenase 2; Reviewed Back     alignment and domain information
>gnl|CDD|233243 TIGR01036, pyrD_sub2, dihydroorotate dehydrogenase, subfamily 2 Back     alignment and domain information
>gnl|CDD|178421 PLN02826, PLN02826, dihydroorotate dehydrogenase Back     alignment and domain information
>gnl|CDD|240073 cd04722, TIM_phosphate_binding, TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 422
PLN02495385 oxidoreductase, acting on the CH-CH group of donor 100.0
PRK08318420 dihydropyrimidine dehydrogenase subunit B; Validat 100.0
COG0167310 PyrD Dihydroorotate dehydrogenase [Nucleotide tran 100.0
PRK02506310 dihydroorotate dehydrogenase 1A; Reviewed 100.0
KOG1799471 consensus Dihydropyrimidine dehydrogenase [Nucleot 100.0
cd04739325 DHOD_like Dihydroorotate dehydrogenase (DHOD) like 100.0
cd02940299 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FM 100.0
PRK07259301 dihydroorotate dehydrogenase 1B; Reviewed 100.0
PLN02826409 dihydroorotate dehydrogenase 100.0
PRK07565334 dihydroorotate dehydrogenase 2; Reviewed 100.0
cd04741294 DHOD_1A_like Dihydroorotate dehydrogenase (DHOD) c 100.0
cd04740296 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) c 100.0
PF01180295 DHO_dh: Dihydroorotate dehydrogenase; InterPro: IP 100.0
TIGR01037300 pyrD_sub1_fam dihydroorotate dehydrogenase (subfam 100.0
PRK05286344 dihydroorotate dehydrogenase 2; Reviewed 100.0
TIGR01036335 pyrD_sub2 dihydroorotate dehydrogenase, subfamily 100.0
cd04738327 DHOD_2_like Dihydroorotate dehydrogenase (DHOD) cl 100.0
KOG1436398 consensus Dihydroorotate dehydrogenase [Nucleotide 100.0
cd02810289 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) 100.0
TIGR00737319 nifR3_yhdG putative TIM-barrel protein, nifR3 fami 99.96
TIGR00736231 nifR3_rel_arch TIM-barrel protein, putative. Membe 99.96
PRK10415321 tRNA-dihydrouridine synthase B; Provisional 99.96
cd02811326 IDI-2_FMN Isopentenyl-diphosphate:dimethylallyl di 99.96
TIGR02151333 IPP_isom_2 isopentenyl-diphosphate delta-isomerase 99.95
PRK05437352 isopentenyl pyrophosphate isomerase; Provisional 99.95
TIGR00742318 yjbN tRNA dihydrouridine synthase A. Members of th 99.95
cd02911233 arch_FMN Archeal FMN-binding domain. This family o 99.95
PRK10550312 tRNA-dihydrouridine synthase C; Provisional 99.94
COG0042323 tRNA-dihydrouridine synthase [Translation, ribosom 99.94
PRK11815333 tRNA-dihydrouridine synthase A; Provisional 99.93
cd02809299 alpha_hydroxyacid_oxid_FMN Family of homologous FM 99.93
cd02801231 DUS_like_FMN Dihydrouridine synthase-like (DUS-lik 99.91
PF01207309 Dus: Dihydrouridine synthase (Dus); InterPro: IPR0 99.89
KOG2335358 consensus tRNA-dihydrouridine synthase [Translatio 99.89
PRK13523337 NADPH dehydrogenase NamA; Provisional 99.88
cd02922344 FCB2_FMN Flavocytochrome b2 (FCB2) FMN-binding dom 99.88
cd02803327 OYE_like_FMN_family Old yellow enzyme (OYE)-like F 99.87
cd04737351 LOX_like_FMN L-Lactate oxidase (LOX) FMN-binding d 99.87
cd02932336 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN 99.86
cd04734343 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN 99.85
cd04733338 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN 99.84
PLN02535364 glycolate oxidase 99.84
cd02931382 ER_like_FMN Enoate reductase (ER)-like FMN-binding 99.84
cd02930353 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-bindin 99.83
COG1902363 NemA NADH:flavin oxidoreductases, Old Yellow Enzym 99.83
cd02933338 OYE_like_FMN Old yellow enzyme (OYE)-like FMN bind 99.82
TIGR02708367 L_lactate_ox L-lactate oxidase. Members of this pr 99.82
cd04735353 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN 99.82
cd04747361 OYE_like_5_FMN Old yellow enzyme (OYE)-related FMN 99.82
PF01070356 FMN_dh: FMN-dependent dehydrogenase; InterPro: IPR 99.81
cd02929370 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) 99.8
TIGR01306321 GMP_reduct_2 guanosine monophosphate reductase, ba 99.8
PLN02979366 glycolate oxidase 99.8
cd03332383 LMO_FMN L-Lactate 2-monooxygenase (LMO) FMN-bindin 99.8
PRK11197381 lldD L-lactate dehydrogenase; Provisional 99.79
PRK05458326 guanosine 5'-monophosphate oxidoreductase; Provisi 99.79
PLN02493367 probable peroxisomal (S)-2-hydroxy-acid oxidase 99.79
PF00724341 Oxidored_FMN: NADH:flavin oxidoreductase / NADH ox 99.78
cd04736361 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-bin 99.77
PRK10605362 N-ethylmaleimide reductase; Provisional 99.76
PRK08255765 salicylyl-CoA 5-hydroxylase; Reviewed 99.76
cd00381325 IMPDH IMPDH: The catalytic domain of the inosine m 99.75
KOG0538363 consensus Glycolate oxidase [Energy production and 99.75
PLN02411391 12-oxophytodienoate reductase 99.72
TIGR01305343 GMP_reduct_1 guanosine monophosphate reductase, eu 99.68
PRK08649368 inosine 5-monophosphate dehydrogenase; Validated 99.66
TIGR01304369 IMP_DH_rel_2 IMP dehydrogenase family protein. Thi 99.65
KOG2333614 consensus Uncharacterized conserved protein [Gener 99.64
PRK05096346 guanosine 5'-monophosphate oxidoreductase; Provisi 99.61
cd02808392 GltS_FMN Glutamate synthase (GltS) FMN-binding dom 99.57
PRK06843404 inosine 5-monophosphate dehydrogenase; Validated 99.56
TIGR03151307 enACPred_II putative enoyl-(acyl-carrier-protein) 99.56
PRK13125244 trpA tryptophan synthase subunit alpha; Provisiona 99.55
cd04722200 TIM_phosphate_binding TIM barrel proteins share a 99.55
PF00478352 IMPDH: IMP dehydrogenase / GMP reductase domain; I 99.53
COG1304360 idi Isopentenyl diphosphate isomerase (BS_ypgA, MT 99.52
cd04730236 NPD_like 2-Nitropropane dioxygenase (NPD), one of 99.45
PF03060330 NMO: Nitronate monooxygenase; InterPro: IPR004136 99.45
cd04743320 NPD_PKS 2-Nitropropane dioxygenase (NPD)-like doma 99.28
KOG2334 477 consensus tRNA-dihydrouridine synthase [Translatio 99.27
cd04724242 Tryptophan_synthase_alpha Ttryptophan synthase (TR 99.24
PRK04180293 pyridoxal biosynthesis lyase PdxS; Provisional 99.24
PTZ00314495 inosine-5'-monophosphate dehydrogenase; Provisiona 99.22
COG2070336 Dioxygenases related to 2-nitropropane dioxygenase 99.22
TIGR00262256 trpA tryptophan synthase, alpha subunit. Tryptopha 99.21
PRK01033258 imidazole glycerol phosphate synthase subunit HisF 99.2
PRK07107502 inosine 5-monophosphate dehydrogenase; Validated 99.19
cd04728248 ThiG Thiazole synthase (ThiG) is the tetrameric en 99.19
PF04131192 NanE: Putative N-acetylmannosamine-6-phosphate epi 99.18
cd04742418 NPD_FabD 2-Nitropropane dioxygenase (NPD)-like dom 99.18
cd04731243 HisF The cyclase subunit of imidazoleglycerol phos 99.15
PRK00208250 thiG thiazole synthase; Reviewed 99.14
PLN02274505 inosine-5'-monophosphate dehydrogenase 99.12
CHL00200263 trpA tryptophan synthase alpha subunit; Provisiona 99.11
cd04727283 pdxS PdxS is a subunit of the pyridoxal 5'-phospha 99.11
TIGR01303475 IMP_DH_rel_1 IMP dehydrogenase family protein. Thi 99.11
PRK14024241 phosphoribosyl isomerase A; Provisional 99.1
TIGR02814 444 pfaD_fam PfaD family protein. The protein PfaD is 99.1
TIGR01302450 IMP_dehydrog inosine-5'-monophosphate dehydrogenas 99.09
PRK02083253 imidazole glycerol phosphate synthase subunit HisF 99.07
TIGR00735254 hisF imidazoleglycerol phosphate synthase, cyclase 99.07
PRK01130221 N-acetylmannosamine-6-phosphate 2-epimerase; Provi 99.06
PRK05567486 inosine 5'-monophosphate dehydrogenase; Reviewed 99.05
PLN02591250 tryptophan synthase 99.05
PRK13585241 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met 99.04
cd00331217 IGPS Indole-3-glycerol phosphate synthase (IGPS); 99.02
TIGR00007230 phosphoribosylformimino-5-aminoimidazole carboxami 99.02
TIGR03572232 WbuZ glycosyl amidation-associated protein WbuZ. T 99.02
PRK00748233 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met 99.02
cd04729219 NanE N-acetylmannosamine-6-phosphate epimerase (Na 99.01
TIGR03315 1012 Se_ygfK putative selenate reductase, YgfK subunit. 99.0
cd04732234 HisA HisA. Phosphoribosylformimino-5-aminoimidazol 99.0
COG0159265 TrpA Tryptophan synthase alpha chain [Amino acid t 98.99
PRK09853 1019 putative selenate reductase subunit YgfK; Provisio 98.98
PRK00507221 deoxyribose-phosphate aldolase; Provisional 98.97
PF05690247 ThiG: Thiazole biosynthesis protein ThiG; InterPro 98.96
PF00290259 Trp_syntA: Tryptophan synthase alpha chain; InterP 98.94
KOG2550503 consensus IMP dehydrogenase/GMP reductase [Nucleot 98.92
TIGR00343287 pyridoxal 5'-phosphate synthase, synthase subunit 98.92
PF01645368 Glu_synthase: Conserved region in glutamate syntha 98.9
CHL00162267 thiG thiamin biosynthesis protein G; Validated 98.88
COG0069485 GltB Glutamate synthase domain 2 [Amino acid trans 98.87
TIGR03128206 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the 98.84
PRK13111258 trpA tryptophan synthase subunit alpha; Provisiona 98.84
PRK07807479 inosine 5-monophosphate dehydrogenase; Validated 98.83
cd00945201 Aldolase_Class_I Class I aldolases. The class I al 98.81
PRK08883220 ribulose-phosphate 3-epimerase; Provisional 98.8
PRK11750 1485 gltB glutamate synthase subunit alpha; Provisional 98.76
TIGR01304369 IMP_DH_rel_2 IMP dehydrogenase family protein. Thi 98.76
PRK11840326 bifunctional sulfur carrier protein/thiazole synth 98.73
TIGR02320285 PEP_mutase phosphoenolpyruvate phosphomutase. A cl 98.66
COG3010229 NanE Putative N-acetylmannosamine-6-phosphate epim 98.66
TIGR01163210 rpe ribulose-phosphate 3-epimerase. This family co 98.65
cd04731243 HisF The cyclase subunit of imidazoleglycerol phos 98.65
PTZ00170228 D-ribulose-5-phosphate 3-epimerase; Provisional 98.62
TIGR00735254 hisF imidazoleglycerol phosphate synthase, cyclase 98.61
KOG0134400 consensus NADH:flavin oxidoreductase/12-oxophytodi 98.59
cd04726202 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxyl 98.59
PRK02083253 imidazole glycerol phosphate synthase subunit HisF 98.58
TIGR01769205 GGGP geranylgeranylglyceryl phosphate synthase. Th 98.58
COG2022262 ThiG Uncharacterized enzyme of thiazole biosynthes 98.58
PRK08745223 ribulose-phosphate 3-epimerase; Provisional 98.57
PLN02334229 ribulose-phosphate 3-epimerase 98.55
PRK00278260 trpC indole-3-glycerol-phosphate synthase; Reviewe 98.53
PRK06552213 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 98.51
COG0036220 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate 98.5
PRK13587234 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met 98.5
TIGR00259257 thylakoid_BtpA membrane complex biogenesis protein 98.48
PF04481242 DUF561: Protein of unknown function (DUF561); Inte 98.48
PRK07695201 transcriptional regulator TenI; Provisional 98.47
COG0107256 HisF Imidazoleglycerol-phosphate synthase [Amino a 98.46
PRK13307391 bifunctional formaldehyde-activating enzyme/3-hexu 98.45
PRK14057254 epimerase; Provisional 98.45
COG0106241 HisA Phosphoribosylformimino-5-aminoimidazole carb 98.43
PRK08091228 ribulose-phosphate 3-epimerase; Validated 98.43
PRK08005210 epimerase; Validated 98.42
cd00429211 RPE Ribulose-5-phosphate 3-epimerase (RPE). This e 98.42
PRK04169232 geranylgeranylglyceryl phosphate synthase-like pro 98.41
PF00977229 His_biosynth: Histidine biosynthesis protein; Inte 98.37
PF00834201 Ribul_P_3_epim: Ribulose-phosphate 3 epimerase fam 98.36
TIGR01768223 GGGP-family geranylgeranylglyceryl phosphate synth 98.34
PF03437254 BtpA: BtpA family; InterPro: IPR005137 Photosystem 98.33
PRK08649368 inosine 5-monophosphate dehydrogenase; Validated 98.32
PRK09140206 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; R 98.32
cd04732234 HisA HisA. Phosphoribosylformimino-5-aminoimidazol 98.32
TIGR01182204 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxypho 98.29
TIGR00126211 deoC deoxyribose-phosphate aldolase. Deoxyribose-p 98.28
TIGR02317285 prpB methylisocitrate lyase. Members of this famil 98.26
cd00452190 KDPG_aldolase KDPG and KHG aldolase. This family b 98.26
cd04723233 HisA_HisF Phosphoribosylformimino-5-aminoimidazole 98.24
PF00218254 IGPS: Indole-3-glycerol phosphate synthase; InterP 98.21
COG0214296 SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme meta 98.21
COG0107256 HisF Imidazoleglycerol-phosphate synthase [Amino a 98.2
cd00377243 ICL_PEPM Members of the ICL/PEPM enzyme family cat 98.18
PRK07028 430 bifunctional hexulose-6-phosphate synthase/ribonuc 98.18
PRK11320292 prpB 2-methylisocitrate lyase; Provisional 98.18
TIGR01919243 hisA-trpF 1-(5-phosphoribosyl)-5-[(5-phosphoribosy 98.16
COG0269217 SgbH 3-hexulose-6-phosphate synthase and related p 98.15
PRK00043212 thiE thiamine-phosphate pyrophosphorylase; Reviewe 98.15
cd00959203 DeoC 2-deoxyribose-5-phosphate aldolase (DERA) of 98.14
PRK09722229 allulose-6-phosphate 3-epimerase; Provisional 98.14
cd00564196 TMP_TenI Thiamine monophosphate synthase (TMP synt 98.14
PF13714238 PEP_mutase: Phosphoenolpyruvate phosphomutase; PDB 98.12
PRK14024241 phosphoribosyl isomerase A; Provisional 98.12
PRK00748233 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met 98.11
PLN02617538 imidazole glycerol phosphate synthase hisHF 98.11
PRK13957247 indole-3-glycerol-phosphate synthase; Provisional 98.1
COG0434263 SgcQ Predicted TIM-barrel enzyme [General function 98.1
COG1646240 Predicted phosphate-binding enzymes, TIM-barrel fo 98.1
PRK06512221 thiamine-phosphate pyrophosphorylase; Provisional 98.1
PRK05581220 ribulose-phosphate 3-epimerase; Validated 98.09
PRK06015201 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 98.09
TIGR02321290 Pphn_pyruv_hyd phosphonopyruvate hydrolase. This f 98.08
TIGR02319294 CPEP_Pphonmut carboxyvinyl-carboxyphosphonate phos 98.07
PLN02446262 (5-phosphoribosyl)-5-[(5-phosphoribosylamino)methy 98.06
PRK04302223 triosephosphate isomerase; Provisional 98.05
PRK07114222 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 98.04
PRK05718212 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 98.01
COG0274228 DeoC Deoxyribose-phosphate aldolase [Nucleotide tr 98.01
cd00958235 DhnA Class I fructose-1,6-bisphosphate (FBP) aldol 98.0
PRK07455187 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 97.99
PRK13585241 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met 97.98
TIGR03572232 WbuZ glycosyl amidation-associated protein WbuZ. T 97.97
PRK04128228 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met 97.93
COG0352211 ThiE Thiamine monophosphate synthase [Coenzyme met 97.93
PRK13587234 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met 97.93
COG2876286 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate ( 97.92
PRK00278260 trpC indole-3-glycerol-phosphate synthase; Reviewe 97.92
PTZ00314495 inosine-5'-monophosphate dehydrogenase; Provisiona 97.91
PRK14114241 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met 97.9
cd06556240 ICL_KPHMT Members of the ICL/PEPM_KPHMT enzyme sup 97.9
PRK13586232 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met 97.9
PF01081196 Aldolase: KDPG and KHG aldolase; InterPro: IPR0008 97.9
PRK04128228 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met 97.89
PRK13397250 3-deoxy-7-phosphoheptulonate synthase; Provisional 97.89
PRK07226267 fructose-bisphosphate aldolase; Provisional 97.87
KOG1606296 consensus Stationary phase-induced protein, SOR/SN 97.86
PRK01033258 imidazole glycerol phosphate synthase subunit HisF 97.86
PF00977229 His_biosynth: Histidine biosynthesis protein; Inte 97.86
TIGR01949258 AroFGH_arch predicted phospho-2-dehydro-3-deoxyhep 97.85
TIGR00007230 phosphoribosylformimino-5-aminoimidazole carboxami 97.84
PRK06806281 fructose-bisphosphate aldolase; Provisional 97.79
TIGR00734221 hisAF_rel hisA/hisF family protein. This alignment 97.78
TIGR02129253 hisA_euk phosphoribosylformimino-5-aminoimidazole 97.78
PRK12457281 2-dehydro-3-deoxyphosphooctonate aldolase; Provisi 97.77
PF02581180 TMP-TENI: Thiamine monophosphate synthase/TENI; In 97.75
PF01791236 DeoC: DeoC/LacD family aldolase; InterPro: IPR0029 97.75
cd00405203 PRAI Phosphoribosylanthranilate isomerase (PRAI) c 97.74
PLN02617538 imidazole glycerol phosphate synthase hisHF 97.72
TIGR00693196 thiE thiamine-phosphate pyrophosphorylase. This mo 97.7
PRK02615347 thiamine-phosphate pyrophosphorylase; Provisional 97.69
cd00408281 DHDPS-like Dihydrodipicolinate synthase family. A 97.69
TIGR02129253 hisA_euk phosphoribosylformimino-5-aminoimidazole 97.68
COG2513289 PrpB PEP phosphonomutase and related enzymes [Carb 97.65
PRK03512211 thiamine-phosphate pyrophosphorylase; Provisional 97.65
PRK05283257 deoxyribose-phosphate aldolase; Provisional 97.64
COG0134254 TrpC Indole-3-glycerol phosphate synthase [Amino a 97.63
TIGR01859282 fruc_bis_ald_ fructose-1,6-bisphosphate aldolase, 97.63
PF00701289 DHDPS: Dihydrodipicolinate synthetase family; Inte 97.63
PLN02460338 indole-3-glycerol-phosphate synthase 97.62
PRK13586232 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met 97.62
cd00951289 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also 97.61
PRK13802 695 bifunctional indole-3-glycerol phosphate synthase/ 97.6
cd02812219 PcrB_like PcrB_like proteins. One member of this f 97.56
PF01884230 PcrB: PcrB family; InterPro: IPR008205 This entry 97.55
cd04723233 HisA_HisF Phosphoribosylformimino-5-aminoimidazole 97.54
KOG3111224 consensus D-ribulose-5-phosphate 3-epimerase [Carb 97.53
PRK14114241 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)met 97.52
COG0800211 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Ca 97.51
PF01081196 Aldolase: KDPG and KHG aldolase; InterPro: IPR0008 97.48
cd03319316 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase cat 97.47
PRK06801286 hypothetical protein; Provisional 97.46
cd03316357 MR_like Mandelate racemase (MR)-like subfamily of 97.46
TIGR00674285 dapA dihydrodipicolinate synthase. Dihydrodipicoli 97.46
PLN02446262 (5-phosphoribosyl)-5-[(5-phosphoribosylamino)methy 97.45
PLN03033290 2-dehydro-3-deoxyphosphooctonate aldolase; Provisi 97.43
TIGR01919243 hisA-trpF 1-(5-phosphoribosyl)-5-[(5-phosphoribosy 97.43
TIGR03249296 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-deh 97.43
PRK03620303 5-dehydro-4-deoxyglucarate dehydratase; Provisiona 97.42
PRK09427 454 bifunctional indole-3-glycerol phosphate synthase/ 97.42
PRK08999312 hypothetical protein; Provisional 97.42
PRK13111258 trpA tryptophan synthase subunit alpha; Provisiona 97.41
PRK13306216 ulaD 3-keto-L-gulonate-6-phosphate decarboxylase; 97.39
PRK12595360 bifunctional 3-deoxy-7-phosphoheptulonate synthase 97.38
PF00478352 IMPDH: IMP dehydrogenase / GMP reductase domain; I 97.36
PRK13813215 orotidine 5'-phosphate decarboxylase; Provisional 97.36
PRK05198264 2-dehydro-3-deoxyphosphooctonate aldolase; Provisi 97.36
TIGR01362258 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase. 97.35
cd04733338 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN 97.35
PRK08673335 3-deoxy-7-phosphoheptulonate synthase; Reviewed 97.32
PRK00311264 panB 3-methyl-2-oxobutanoate hydroxymethyltransfer 97.32
PRK13398266 3-deoxy-7-phosphoheptulonate synthase; Provisional 97.25
COG0106241 HisA Phosphoribosylformimino-5-aminoimidazole carb 97.25
TIGR01302450 IMP_dehydrog inosine-5'-monophosphate dehydrogenas 97.24
cd06557254 KPHMT-like Ketopantoate hydroxymethyltransferase ( 97.21
TIGR02313294 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic ac 97.2
TIGR00683290 nanA N-acetylneuraminate lyase. N-acetylneuraminat 97.19
PRK12290437 thiE thiamine-phosphate pyrophosphorylase; Reviewe 97.19
PRK10550312 tRNA-dihydrouridine synthase C; Provisional 97.18
cd00954288 NAL N-Acetylneuraminic acid aldolase, also called 97.18
cd02803327 OYE_like_FMN_family Old yellow enzyme (OYE)-like F 97.17
PRK04147293 N-acetylneuraminate lyase; Provisional 97.17
PRK03170292 dihydrodipicolinate synthase; Provisional 97.16
cd00950284 DHDPS Dihydrodipicolinate synthase (DHDPS) is a ke 97.15
PRK07315293 fructose-bisphosphate aldolase; Provisional 97.15
PRK13396352 3-deoxy-7-phosphoheptulonate synthase; Provisional 97.15
COG0329299 DapA Dihydrodipicolinate synthase/N-acetylneuramin 97.13
PRK05848273 nicotinate-nucleotide pyrophosphorylase; Provision 97.08
KOG1799 471 consensus Dihydropyrimidine dehydrogenase [Nucleot 97.08
PRK13523337 NADPH dehydrogenase NamA; Provisional 97.03
PRK06552213 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 97.03
cd02931382 ER_like_FMN Enoate reductase (ER)-like FMN-binding 97.01
cd03315265 MLE_like Muconate lactonizing enzyme (MLE) like su 96.98
PF03932201 CutC: CutC family; InterPro: IPR005627 Copper tran 96.97
PLN02274 505 inosine-5'-monophosphate dehydrogenase 96.97
cd02933338 OYE_like_FMN Old yellow enzyme (OYE)-like FMN bind 96.95
PF04131192 NanE: Putative N-acetylmannosamine-6-phosphate epi 96.94
cd04734343 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN 96.88
cd04727283 pdxS PdxS is a subunit of the pyridoxal 5'-phospha 96.87
TIGR01361260 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate 96.86
cd02932336 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN 96.83
cd02801231 DUS_like_FMN Dihydrouridine synthase-like (DUS-lik 96.78
PLN02898502 HMP-P kinase/thiamin-monophosphate pyrophosphoryla 96.77
TIGR03569329 NeuB_NnaB N-acetylneuraminate synthase. This famil 96.74
cd00381325 IMPDH IMPDH: The catalytic domain of the inosine m 96.74
TIGR00734221 hisAF_rel hisA/hisF family protein. This alignment 96.7
cd04740296 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) c 96.69
PRK05567 486 inosine 5'-monophosphate dehydrogenase; Reviewed 96.68
PRK00230230 orotidine 5'-phosphate decarboxylase; Reviewed 96.68
TIGR00736231 nifR3_rel_arch TIM-barrel protein, putative. Membe 96.65
TIGR00222263 panB 3-methyl-2-oxobutanoate hydroxymethyltransfer 96.63
TIGR00343287 pyridoxal 5'-phosphate synthase, synthase subunit 96.6
cd00377243 ICL_PEPM Members of the ICL/PEPM enzyme family cat 96.58
PRK07114222 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 96.57
PLN02591250 tryptophan synthase 96.56
PRK12858340 tagatose 1,6-diphosphate aldolase; Reviewed 96.54
PLN02424332 ketopantoate hydroxymethyltransferase 96.52
PRK01130221 N-acetylmannosamine-6-phosphate 2-epimerase; Provi 96.5
cd00331217 IGPS Indole-3-glycerol phosphate synthase (IGPS); 96.5
PRK11572248 copper homeostasis protein CutC; Provisional 96.5
PRK11320292 prpB 2-methylisocitrate lyase; Provisional 96.49
cd00945201 Aldolase_Class_I Class I aldolases. The class I al 96.48
CHL00200263 trpA tryptophan synthase alpha subunit; Provisiona 96.47
PRK08185283 hypothetical protein; Provisional 96.46
PRK06256336 biotin synthase; Validated 96.46
PRK10415321 tRNA-dihydrouridine synthase B; Provisional 96.46
TIGR01303475 IMP_DH_rel_1 IMP dehydrogenase family protein. Thi 96.44
TIGR01305343 GMP_reduct_1 guanosine monophosphate reductase, eu 96.43
PF01207309 Dus: Dihydrouridine synthase (Dus); InterPro: IPR0 96.43
cd02930353 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-bindin 96.42
cd00952309 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate 96.41
TIGR00737319 nifR3_yhdG putative TIM-barrel protein, nifR3 fami 96.4
cd00956211 Transaldolase_FSA Transaldolase-like fructose-6-ph 96.39
PRK07565334 dihydroorotate dehydrogenase 2; Reviewed 96.38
COG0800211 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Ca 96.34
cd04735353 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN 96.34
PF09370268 TIM-br_sig_trns: TIM-barrel signal transduction pr 96.33
TIGR01306321 GMP_reduct_2 guanosine monophosphate reductase, ba 96.32
PRK07998283 gatY putative fructose-1,6-bisphosphate aldolase; 96.32
TIGR02317285 prpB methylisocitrate lyase. Members of this famil 96.3
PRK12376236 putative translaldolase; Provisional 96.29
KOG4175268 consensus Tryptophan synthase alpha chain [Amino a 96.28
TIGR00078265 nadC nicotinate-nucleotide pyrophosphorylase. Syno 96.27
PRK05096346 guanosine 5'-monophosphate oxidoreductase; Provisi 96.25
PRK07428288 nicotinate-nucleotide pyrophosphorylase; Provision 96.25
COG0042323 tRNA-dihydrouridine synthase [Translation, ribosom 96.25
PRK09517 755 multifunctional thiamine-phosphate pyrophosphoryla 96.24
PRK12656222 fructose-6-phosphate aldolase; Reviewed 96.23
TIGR00262256 trpA tryptophan synthase, alpha subunit. Tryptopha 96.21
cd04729219 NanE N-acetylmannosamine-6-phosphate epimerase (Na 96.21
cd08210364 RLP_RrRLP Ribulose bisphosphate carboxylase like p 96.2
PRK08227264 autoinducer 2 aldolase; Validated 96.19
PRK08255765 salicylyl-CoA 5-hydroxylase; Reviewed 96.19
PRK08508279 biotin synthase; Provisional 96.18
PRK10605362 N-ethylmaleimide reductase; Provisional 96.17
COG0329299 DapA Dihydrodipicolinate synthase/N-acetylneuramin 96.16
cd08205367 RuBisCO_IV_RLP Ribulose bisphosphate carboxylase l 96.16
cd02810289 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) 96.15
COG3010229 NanE Putative N-acetylmannosamine-6-phosphate epim 96.14
COG0159265 TrpA Tryptophan synthase alpha chain [Amino acid t 96.1
cd04726202 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxyl 96.09
cd01573272 modD_like ModD; Quinolinate phosphoribosyl transfe 96.09
cd00408281 DHDPS-like Dihydrodipicolinate synthase family. A 96.05
PRK07807479 inosine 5-monophosphate dehydrogenase; Validated 96.01
TIGR02134236 transald_staph transaldolase. This small family of 95.98
PRK13957247 indole-3-glycerol-phosphate synthase; Provisional 95.97
TIGR03249296 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-deh 95.93
TIGR02319294 CPEP_Pphonmut carboxyvinyl-carboxyphosphonate phos 95.92
cd00951289 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also 95.91
PRK05581220 ribulose-phosphate 3-epimerase; Validated 95.91
PRK07259301 dihydroorotate dehydrogenase 1B; Reviewed 95.9
TIGR03128206 RuMP_HxlA 3-hexulose-6-phosphate synthase. at the 95.88
cd04747361 OYE_like_5_FMN Old yellow enzyme (OYE)-related FMN 95.88
COG2513289 PrpB PEP phosphonomutase and related enzymes [Carb 95.87
PRK05742277 nicotinate-nucleotide pyrophosphorylase; Provision 95.87
TIGR01182204 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxypho 95.86
COG3684306 LacD Tagatose-1,6-bisphosphate aldolase [Carbohydr 95.83
PRK03620303 5-dehydro-4-deoxyglucarate dehydratase; Provisiona 95.83
PF00793270 DAHP_synth_1: DAHP synthetase I family; InterPro: 95.82
cd03174265 DRE_TIM_metallolyase DRE-TIM metallolyase superfam 95.77
cd04738327 DHOD_2_like Dihydroorotate dehydrogenase (DHOD) cl 95.76
cd00952309 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate 95.73
PRK05437352 isopentenyl pyrophosphate isomerase; Provisional 95.7
PRK08072277 nicotinate-nucleotide pyrophosphorylase; Provision 95.7
PRK05718212 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 95.69
TIGR02320285 PEP_mutase phosphoenolpyruvate phosphomutase. A cl 95.69
PRK07709285 fructose-bisphosphate aldolase; Provisional 95.67
PRK06015201 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphog 95.66
cd00947276 TBP_aldolase_IIB Tagatose-1,6-bisphosphate (TBP) a 95.63
COG4981 717 Enoyl reductase domain of yeast-type FAS1 [Lipid m 95.61
cd01572268 QPRTase Quinolinate phosphoribosyl transferase (QA 95.59
cd08207406 RLP_NonPhot Ribulose bisphosphate carboxylase like 95.59
TIGR01858282 tag_bisphos_ald class II aldolase, tagatose bispho 95.59
TIGR01037300 pyrD_sub1_fam dihydroorotate dehydrogenase (subfam 95.59
TIGR02321290 Pphn_pyruv_hyd phosphonopyruvate hydrolase. This f 95.56
TIGR03326412 rubisco_III ribulose bisphosphate carboxylase, typ 95.54
TIGR00433296 bioB biotin synthetase. Catalyzes the last step of 95.52
PRK09485304 mmuM homocysteine methyltransferase; Provisional 95.5
cd06556240 ICL_KPHMT Members of the ICL/PEPM_KPHMT enzyme sup 95.49
PF03740239 PdxJ: Pyridoxal phosphate biosynthesis protein Pdx 95.48
PRK06852304 aldolase; Validated 95.46
cd00950284 DHDPS Dihydrodipicolinate synthase (DHDPS) is a ke 95.45
PRK08385278 nicotinate-nucleotide pyrophosphorylase; Provision 95.44
cd02911233 arch_FMN Archeal FMN-binding domain. This family o 95.43
PRK05286344 dihydroorotate dehydrogenase 2; Reviewed 95.41
cd04739325 DHOD_like Dihydroorotate dehydrogenase (DHOD) like 95.4
cd01568269 QPRTase_NadC Quinolinate phosphoribosyl transferas 95.39
PRK09195284 gatY tagatose-bisphosphate aldolase; Reviewed 95.37
cd00959203 DeoC 2-deoxyribose-5-phosphate aldolase (DERA) of 95.36
cd00953279 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolas 95.35
cd04725216 OMP_decarboxylase_like Orotidine 5'-phosphate deca 95.33
PLN02979366 glycolate oxidase 95.31
TIGR00683290 nanA N-acetylneuraminate lyase. N-acetylneuraminat 95.31
cd06557254 KPHMT-like Ketopantoate hydroxymethyltransferase ( 95.29
PRK12737284 gatY tagatose-bisphosphate aldolase; Reviewed 95.26
COG1902363 NemA NADH:flavin oxidoreductases, Old Yellow Enzym 95.25
cd02929370 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) 95.24
PRK12738286 kbaY tagatose-bisphosphate aldolase; Reviewed 95.22
PF00290259 Trp_syntA: Tryptophan synthase alpha chain; InterP 95.19
PF01729169 QRPTase_C: Quinolinate phosphoribosyl transferase, 95.17
TIGR00674285 dapA dihydrodipicolinate synthase. Dihydrodipicoli 95.16
PLN02417280 dihydrodipicolinate synthase 95.14
PF04481242 DUF561: Protein of unknown function (DUF561); Inte 95.12
PRK04147293 N-acetylneuraminate lyase; Provisional 95.09
PF01116287 F_bP_aldolase: Fructose-bisphosphate aldolase clas 95.08
cd02940299 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FM 95.07
cd00954288 NAL N-Acetylneuraminic acid aldolase, also called 94.98
PLN02389379 biotin synthase 94.97
cd03329368 MR_like_4 Mandelate racemase (MR)-like subfamily o 94.95
PRK11815333 tRNA-dihydrouridine synthase A; Provisional 94.94
PRK05458326 guanosine 5'-monophosphate oxidoreductase; Provisi 94.86
PRK04208468 rbcL ribulose bisophosphate carboxylase; Reviewed 94.84
cd04741294 DHOD_1A_like Dihydroorotate dehydrogenase (DHOD) c 94.84
PF00701289 DHDPS: Dihydrodipicolinate synthetase family; Inte 94.77
PRK07094323 biotin synthase; Provisional 94.74
PRK02227238 hypothetical protein; Provisional 94.73
TIGR02313 294 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic ac 94.72
cd08209391 RLP_DK-MTP-1-P-enolase 2,3-diketo-5-methylthiopent 94.71
TIGR01232325 lacD tagatose 1,6-diphosphate aldolase. This famil 94.68
cd01573272 modD_like ModD; Quinolinate phosphoribosyl transfe 94.66
PRK04161329 tagatose 1,6-diphosphate aldolase; Reviewed 94.66
TIGR03217333 4OH_2_O_val_ald 4-hydroxy-2-oxovalerate aldolase. 94.63
PF09370268 TIM-br_sig_trns: TIM-barrel signal transduction pr 94.61
PRK08610286 fructose-bisphosphate aldolase; Reviewed 94.6
PRK15108345 biotin synthase; Provisional 94.58
TIGR01740213 pyrF orotidine 5'-phosphate decarboxylase, subfami 94.57
TIGR02151333 IPP_isom_2 isopentenyl-diphosphate delta-isomerase 94.56
COG0502335 BioB Biotin synthase and related enzymes [Coenzyme 94.54
TIGR00126211 deoC deoxyribose-phosphate aldolase. Deoxyribose-p 94.52
TIGR03586327 PseI pseudaminic acid synthase. 94.52
PRK07428288 nicotinate-nucleotide pyrophosphorylase; Provision 94.52
PRK09722229 allulose-6-phosphate 3-epimerase; Provisional 94.47
PLN02334229 ribulose-phosphate 3-epimerase 94.46
PRK03170292 dihydrodipicolinate synthase; Provisional 94.46
cd00953279 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolas 94.43
PRK09196347 fructose-1,6-bisphosphate aldolase; Reviewed 94.42
TIGR00742318 yjbN tRNA dihydrouridine synthase A. Members of th 94.41
COG5016472 Pyruvate/oxaloacetate carboxyltransferase [Energy 94.4
COG3142241 CutC Uncharacterized protein involved in copper re 94.39
PRK08385278 nicotinate-nucleotide pyrophosphorylase; Provision 94.38
TIGR00167288 cbbA ketose-bisphosphate aldolases. fructose-bisph 94.36
PRK14042 596 pyruvate carboxylase subunit B; Provisional 94.36
PRK00311264 panB 3-methyl-2-oxobutanoate hydroxymethyltransfer 94.35
PF02548261 Pantoate_transf: Ketopantoate hydroxymethyltransfe 94.33
TIGR01521347 FruBisAldo_II_B fructose-bisphosphate aldolase, cl 94.31
PRK12331 448 oxaloacetate decarboxylase; Provisional 94.3
cd07944266 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase- 94.3
PLN02535364 glycolate oxidase 94.27
PRK07896289 nicotinate-nucleotide pyrophosphorylase; Provision 94.27
PRK12330 499 oxaloacetate decarboxylase; Provisional 94.26
cd02809299 alpha_hydroxyacid_oxid_FMN Family of homologous FM 94.24
PF13714238 PEP_mutase: Phosphoenolpyruvate phosphomutase; PDB 94.22
PRK06559290 nicotinate-nucleotide pyrophosphorylase; Provision 94.2
cd02922344 FCB2_FMN Flavocytochrome b2 (FCB2) FMN-binding dom 94.19
PRK05742277 nicotinate-nucleotide pyrophosphorylase; Provision 94.19
PF00682237 HMGL-like: HMGL-like of this family is not conserv 94.17
PRK05835307 fructose-bisphosphate aldolase; Provisional 94.17
KOG4201289 consensus Anthranilate synthase component II [Amin 94.17
PLN02417280 dihydrodipicolinate synthase 94.16
PRK07896289 nicotinate-nucleotide pyrophosphorylase; Provision 94.13
PRK12399324 tagatose 1,6-diphosphate aldolase; Reviewed 94.11
PLN02716308 nicotinate-nucleotide diphosphorylase (carboxylati 94.1
TIGR01334277 modD putative molybdenum utilization protein ModD. 94.08
PRK09140206 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; R 94.08
cd07944266 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase- 94.07
PF00724341 Oxidored_FMN: NADH:flavin oxidoreductase / NADH ox 94.04
PF00682237 HMGL-like: HMGL-like of this family is not conserv 94.02
cd08213412 RuBisCO_large_III Ribulose bisphosphate carboxylas 94.02
PLN02493367 probable peroxisomal (S)-2-hydroxy-acid oxidase 94.02
PRK12857284 fructose-1,6-bisphosphate aldolase; Reviewed 93.97
PRK06106281 nicotinate-nucleotide pyrophosphorylase; Provision 93.96
PF01680208 SOR_SNZ: SOR/SNZ family; InterPro: IPR001852 Snz1p 93.96
KOG4175268 consensus Tryptophan synthase alpha chain [Amino a 93.93
PRK08318420 dihydropyrimidine dehydrogenase subunit B; Validat 93.93
cd04722200 TIM_phosphate_binding TIM barrel proteins share a 93.9
COG0135208 TrpF Phosphoribosylanthranilate isomerase [Amino a 93.9
cd02811326 IDI-2_FMN Isopentenyl-diphosphate:dimethylallyl di 93.9
PRK09016296 quinolinate phosphoribosyltransferase; Validated 93.88
PRK04452319 acetyl-CoA decarbonylase/synthase complex subunit 93.85
cd07943263 DRE_TIM_HOA 4-hydroxy-2-oxovalerate aldolase, N-te 93.82
>PLN02495 oxidoreductase, acting on the CH-CH group of donors Back     alignment and domain information 
Probab=100.00  E-value=1.9e-82  Score=635.48  Aligned_cols=381  Identities=87%  Similarity=1.358  Sum_probs=353.9

Q ss_pred             CCCCCCcceEeCCeecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccccc
Q 014581           41 ASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQII  120 (422)
Q Consensus        41 ~~~~~dL~~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~  120 (422)
                      ...|+||+|+|+|++|+|||++||||.+.+.+.+++++++|||+||+||++.++++.+|+.||+.++..++.+....|++
T Consensus         5 ~~~~~dLst~~~Gl~l~NP~i~ASgp~t~~~e~~~~~~~~g~GAVV~KTi~~~~~~~~n~~pr~~~~~~g~~~~~~~n~i   84 (385)
T PLN02495          5 AASEPDLSVTVNGLKMPNPFVIGSGPPGTNYTVMKRAFDEGWGGVIAKTVSLDASKVINVTPRYARLRAGANGSAKGRVI   84 (385)
T ss_pred             ccCCCcceEEECCEEcCCCcEeCCccCCCCHHHHHHHHhcCCeEEEeccccCCccccCCCCCeEEecCcccccccccccc
Confidence            36789999999999999999999999999999999999999999999999998767899999999876555322334789


Q ss_pred             ccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccc
Q 014581          121 GWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVG  200 (422)
Q Consensus       121 Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~  200 (422)
                      ||+|+++++++++++|+++++++++++|+.|+|+||+++.++++|.+++++++++|+|+||||+||||+++.+++|..++
T Consensus        85 Gl~N~~~~s~~g~~~~l~~i~~~k~~~~~~pvIaSi~~~~s~~~~~~~a~~~e~~GaD~iELNiSCPn~~~~r~~g~~~g  164 (385)
T PLN02495         85 GWQNIELISDRPFETMLAEFKQLKEEYPDRILIASIMEEYNKDAWEEIIERVEETGVDALEINFSCPHGMPERKMGAAVG  164 (385)
T ss_pred             cccCcccccccCHHHHHHHHHHHHhhCCCCcEEEEccCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcCccchhhc
Confidence            99999999999999999999999888888999999986689999999999999999999999999999988888899999


Q ss_pred             cChhHHHHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCCCCCCccCCCC
Q 014581          201 QDCRLLEEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYS  280 (422)
Q Consensus       201 ~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~~~~~~~gG~s  280 (422)
                      ++++.++++++++++.+++||+|||+|+++++.++++++.++|+|||+++||+.++++||+++.+|.+...+++..||+|
T Consensus       165 q~~e~~~~i~~~Vk~~~~iPv~vKLsPn~t~i~~ia~aa~~~Gadgi~liNT~~~~~~ID~~t~~p~~~~~~~~~~GGlS  244 (385)
T PLN02495        165 QDCDLLEEVCGWINAKATVPVWAKMTPNITDITQPARVALKSGCEGVAAINTIMSVMGINLDTLRPEPCVEGYSTPGGYS  244 (385)
T ss_pred             cCHHHHHHHHHHHHHhhcCceEEEeCCChhhHHHHHHHHHHhCCCEEEEecccCcccccccccCccccccCCCCCCCCcc
Confidence            99999999999999999999999999999999999999999999999999999877889999988877554456789999


Q ss_pred             CCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHHH
Q 014581          281 CKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKM  360 (422)
Q Consensus       281 G~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~~  360 (422)
                      |++++|++++.|+++++.+..+++ .++||||+|||.+++||.++|++||++||+||+++++||.++++|+++|++||++
T Consensus       245 G~alkpiAl~~v~~i~~~~~~~~~-~~ipIiGvGGI~s~~Da~e~i~aGAs~VQv~Ta~~~~Gp~vi~~i~~~L~~~m~~  323 (385)
T PLN02495        245 SKAVRPIALAKVMAIAKMMKSEFP-EDRSLSGIGGVETGGDAAEFILLGADTVQVCTGVMMHGYPLVKNLCAELQDFMKK  323 (385)
T ss_pred             chhhhHHHHHHHHHHHHHHhhhcc-CCCcEEEECCCCCHHHHHHHHHhCCCceeEeeeeeecCcHHHHHHHHHHHHHHHH
Confidence            999999999999999998753221 2599999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCHHHhhcCCcccCCChhHHHHHhHHHHhHHHhhhcCCCCCCCCCccchhhhhhhcccC
Q 014581          361 HNFSSIEDFRGASIEYFTTHTELVRMQQEAIQQRKAVRKGLQSDKDWTGDGFVKETLSMVSN  422 (422)
Q Consensus       361 ~G~~si~d~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  422 (422)
                      |||++++|++|.++++++++.++.++++..|++++|+.||+-+|+.|+|++|+|++.||++|
T Consensus       324 ~G~~si~e~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  385 (385)
T PLN02495        324 HNFSSIEDFRGASLPYFTTHTDLVQRQKEAIRQRKAIRKGLASDKDWTGDGFVKETESMVSN  385 (385)
T ss_pred             cCCCCHHHHhCcCCcccCcHHHhhHHHHHhhCHHHHhhhcccccccccccchhhhhHhhhcC
Confidence            99999999999999999999999999999999999999999999999999999999999998

>PRK08318 dihydropyrimidine dehydrogenase subunit B; Validated Back     alignment and domain information
>COG0167 PyrD Dihydroorotate dehydrogenase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK02506 dihydroorotate dehydrogenase 1A; Reviewed Back     alignment and domain information
>KOG1799 consensus Dihydropyrimidine dehydrogenase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd04739 DHOD_like Dihydroorotate dehydrogenase (DHOD) like proteins Back     alignment and domain information
>cd02940 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed Back     alignment and domain information
>PLN02826 dihydroorotate dehydrogenase Back     alignment and domain information
>PRK07565 dihydroorotate dehydrogenase 2; Reviewed Back     alignment and domain information
>cd04741 DHOD_1A_like Dihydroorotate dehydrogenase (DHOD) class 1A FMN-binding domain Back     alignment and domain information
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain Back     alignment and domain information
>PF01180 DHO_dh: Dihydroorotate dehydrogenase; InterPro: IPR012135 Dihydroorotate dehydrogenase (DHOD), also known as dihydroorotate oxidase, catalyses the fourth step in de novo pyrimidine biosynthesis, the stereospecific oxidation of (S)-dihydroorotate to orotate, which is the only redox reaction in this pathway Back     alignment and domain information
>TIGR01037 pyrD_sub1_fam dihydroorotate dehydrogenase (subfamily 1) family protein Back     alignment and domain information
>PRK05286 dihydroorotate dehydrogenase 2; Reviewed Back     alignment and domain information
>TIGR01036 pyrD_sub2 dihydroorotate dehydrogenase, subfamily 2 Back     alignment and domain information
>cd04738 DHOD_2_like Dihydroorotate dehydrogenase (DHOD) class 2 Back     alignment and domain information
>KOG1436 consensus Dihydroorotate dehydrogenase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>TIGR00737 nifR3_yhdG putative TIM-barrel protein, nifR3 family Back     alignment and domain information
>TIGR00736 nifR3_rel_arch TIM-barrel protein, putative Back     alignment and domain information
>PRK10415 tRNA-dihydrouridine synthase B; Provisional Back     alignment and domain information
>cd02811 IDI-2_FMN Isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2 (IDI-2) FMN-binding domain Back     alignment and domain information
>TIGR02151 IPP_isom_2 isopentenyl-diphosphate delta-isomerase, type 2 Back     alignment and domain information
>PRK05437 isopentenyl pyrophosphate isomerase; Provisional Back     alignment and domain information
>TIGR00742 yjbN tRNA dihydrouridine synthase A Back     alignment and domain information
>cd02911 arch_FMN Archeal FMN-binding domain Back     alignment and domain information
>PRK10550 tRNA-dihydrouridine synthase C; Provisional Back     alignment and domain information
>COG0042 tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK11815 tRNA-dihydrouridine synthase A; Provisional Back     alignment and domain information
>cd02809 alpha_hydroxyacid_oxid_FMN Family of homologous FMN-dependent alpha-hydroxyacid oxidizing enzymes Back     alignment and domain information
>cd02801 DUS_like_FMN Dihydrouridine synthase-like (DUS-like) FMN-binding domain Back     alignment and domain information
>PF01207 Dus: Dihydrouridine synthase (Dus); InterPro: IPR001269 Members of this family catalyse the reduction of the 5,6-double bond of a uridine residue on tRNA Back     alignment and domain information
>KOG2335 consensus tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK13523 NADPH dehydrogenase NamA; Provisional Back     alignment and domain information
>cd02922 FCB2_FMN Flavocytochrome b2 (FCB2) FMN-binding domain Back     alignment and domain information
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain Back     alignment and domain information
>cd04737 LOX_like_FMN L-Lactate oxidase (LOX) FMN-binding domain Back     alignment and domain information
>cd02932 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN binding domain Back     alignment and domain information
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3 Back     alignment and domain information
>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2 Back     alignment and domain information
>PLN02535 glycolate oxidase Back     alignment and domain information
>cd02931 ER_like_FMN Enoate reductase (ER)-like FMN-binding domain Back     alignment and domain information
>cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain Back     alignment and domain information
>COG1902 NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion] Back     alignment and domain information
>cd02933 OYE_like_FMN Old yellow enzyme (OYE)-like FMN binding domain Back     alignment and domain information
>TIGR02708 L_lactate_ox L-lactate oxidase Back     alignment and domain information
>cd04735 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 4 Back     alignment and domain information
>cd04747 OYE_like_5_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 5 Back     alignment and domain information
>PF01070 FMN_dh: FMN-dependent dehydrogenase; InterPro: IPR000262 A number of oxidoreductases that act on alpha-hydroxy acids and which are FMN-containing flavoproteins have been shown [, , ] to be structurally related Back     alignment and domain information
>cd02929 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) and histamine dehydrogenase (HD) FMN-binding domain Back     alignment and domain information
>TIGR01306 GMP_reduct_2 guanosine monophosphate reductase, bacterial Back     alignment and domain information
>PLN02979 glycolate oxidase Back     alignment and domain information
>cd03332 LMO_FMN L-Lactate 2-monooxygenase (LMO) FMN-binding domain Back     alignment and domain information
>PRK11197 lldD L-lactate dehydrogenase; Provisional Back     alignment and domain information
>PRK05458 guanosine 5'-monophosphate oxidoreductase; Provisional Back     alignment and domain information
>PLN02493 probable peroxisomal (S)-2-hydroxy-acid oxidase Back     alignment and domain information
>PF00724 Oxidored_FMN: NADH:flavin oxidoreductase / NADH oxidase family; InterPro: IPR001155 The TIM-barrel fold is a closed barrel structure composed of an eight-fold repeat of beta-alpha units, where the eight parallel beta strands on the inside are covered by the eight alpha helices on the outside [] Back     alignment and domain information
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain Back     alignment and domain information
>PRK10605 N-ethylmaleimide reductase; Provisional Back     alignment and domain information
>PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed Back     alignment and domain information
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase Back     alignment and domain information
>KOG0538 consensus Glycolate oxidase [Energy production and conversion] Back     alignment and domain information
>PLN02411 12-oxophytodienoate reductase Back     alignment and domain information
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic Back     alignment and domain information
>PRK08649 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>TIGR01304 IMP_DH_rel_2 IMP dehydrogenase family protein Back     alignment and domain information
>KOG2333 consensus Uncharacterized conserved protein [General function prediction only] Back     alignment and domain information
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional Back     alignment and domain information
>cd02808 GltS_FMN Glutamate synthase (GltS) FMN-binding domain Back     alignment and domain information
>PRK06843 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>TIGR03151 enACPred_II putative enoyl-(acyl-carrier-protein) reductase II Back     alignment and domain information
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional Back     alignment and domain information
>cd04722 TIM_phosphate_binding TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure Back     alignment and domain information
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase Back     alignment and domain information
>COG1304 idi Isopentenyl diphosphate isomerase (BS_ypgA, MTH48 and related proteins) [Coenzyme transport and metabolism] Back     alignment and domain information
>cd04730 NPD_like 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites Back     alignment and domain information
>PF03060 NMO: Nitronate monooxygenase; InterPro: IPR004136 2-Nitropropane dioxygenase (1 Back     alignment and domain information
>cd04743 NPD_PKS 2-Nitropropane dioxygenase (NPD)-like domain, associated with polyketide synthases (PKS) Back     alignment and domain information
>KOG2334 consensus tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd04724 Tryptophan_synthase_alpha Ttryptophan synthase (TRPS) alpha subunit (TSA) Back     alignment and domain information
>PRK04180 pyridoxal biosynthesis lyase PdxS; Provisional Back     alignment and domain information
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional Back     alignment and domain information
>COG2070 Dioxygenases related to 2-nitropropane dioxygenase [General function prediction only] Back     alignment and domain information
>TIGR00262 trpA tryptophan synthase, alpha subunit Back     alignment and domain information
>PRK01033 imidazole glycerol phosphate synthase subunit HisF; Provisional Back     alignment and domain information
>PRK07107 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism Back     alignment and domain information
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [] Back     alignment and domain information
>cd04742 NPD_FabD 2-Nitropropane dioxygenase (NPD)-like domain, associated with the (acyl-carrier-protein) S-malonyltransferase FabD Back     alignment and domain information
>cd04731 HisF The cyclase subunit of imidazoleglycerol phosphate synthase (HisF) Back     alignment and domain information
>PRK00208 thiG thiazole synthase; Reviewed Back     alignment and domain information
>PLN02274 inosine-5'-monophosphate dehydrogenase Back     alignment and domain information
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional Back     alignment and domain information
>cd04727 pdxS PdxS is a subunit of the pyridoxal 5'-phosphate (PLP) synthase, an important enzyme in deoxyxylulose 5-phosphate (DXP)-independent pathway for de novo biosynthesis of PLP, present in some eubacteria, in archaea, fungi, plants, plasmodia, and some metazoa Back     alignment and domain information
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein Back     alignment and domain information
>PRK14024 phosphoribosyl isomerase A; Provisional Back     alignment and domain information
>TIGR02814 pfaD_fam PfaD family protein Back     alignment and domain information
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase Back     alignment and domain information
>PRK02083 imidazole glycerol phosphate synthase subunit HisF; Provisional Back     alignment and domain information
>TIGR00735 hisF imidazoleglycerol phosphate synthase, cyclase subunit Back     alignment and domain information
>PRK01130 N-acetylmannosamine-6-phosphate 2-epimerase; Provisional Back     alignment and domain information
>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed Back     alignment and domain information
>PLN02591 tryptophan synthase Back     alignment and domain information
>PRK13585 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional Back     alignment and domain information
>cd00331 IGPS Indole-3-glycerol phosphate synthase (IGPS); an enzyme in the tryptophan biosynthetic pathway, catalyzing the ring closure reaction of 1-(o-carboxyphenylamino)-1-deoxyribulose-5-phosphate (CdRP) to indole-3-glycerol phosphate (IGP), accompanied by the release of carbon dioxide and water Back     alignment and domain information
>TIGR00007 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Back     alignment and domain information
>TIGR03572 WbuZ glycosyl amidation-associated protein WbuZ Back     alignment and domain information
>PRK00748 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated Back     alignment and domain information
>cd04729 NanE N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate Back     alignment and domain information
>TIGR03315 Se_ygfK putative selenate reductase, YgfK subunit Back     alignment and domain information
>cd04732 HisA HisA Back     alignment and domain information
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism] Back     alignment and domain information
>PRK09853 putative selenate reductase subunit YgfK; Provisional Back     alignment and domain information
>PRK00507 deoxyribose-phosphate aldolase; Provisional Back     alignment and domain information
>PF05690 ThiG: Thiazole biosynthesis protein ThiG; InterPro: IPR008867 This family consists of several bacterial thiazole biosynthesis protein G sequences Back     alignment and domain information
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4 Back     alignment and domain information
>KOG2550 consensus IMP dehydrogenase/GMP reductase [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR00343 pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 Back     alignment and domain information
>PF01645 Glu_synthase: Conserved region in glutamate synthase; InterPro: IPR002932 Ferredoxin-dependent glutamate synthases have been implicated in a number of functions including photorespiration in Arabidopsis where they may also play a role in primary nitrogen assimilation in roots [] Back     alignment and domain information
>CHL00162 thiG thiamin biosynthesis protein G; Validated Back     alignment and domain information
>COG0069 GltB Glutamate synthase domain 2 [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase Back     alignment and domain information
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional Back     alignment and domain information
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>cd00945 Aldolase_Class_I Class I aldolases Back     alignment and domain information
>PRK08883 ribulose-phosphate 3-epimerase; Provisional Back     alignment and domain information
>PRK11750 gltB glutamate synthase subunit alpha; Provisional Back     alignment and domain information
>TIGR01304 IMP_DH_rel_2 IMP dehydrogenase family protein Back     alignment and domain information
>PRK11840 bifunctional sulfur carrier protein/thiazole synthase protein; Provisional Back     alignment and domain information
>TIGR02320 PEP_mutase phosphoenolpyruvate phosphomutase Back     alignment and domain information
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>TIGR01163 rpe ribulose-phosphate 3-epimerase Back     alignment and domain information
>cd04731 HisF The cyclase subunit of imidazoleglycerol phosphate synthase (HisF) Back     alignment and domain information
>PTZ00170 D-ribulose-5-phosphate 3-epimerase; Provisional Back     alignment and domain information
>TIGR00735 hisF imidazoleglycerol phosphate synthase, cyclase subunit Back     alignment and domain information
>KOG0134 consensus NADH:flavin oxidoreductase/12-oxophytodienoate reductase [Energy production and conversion; General function prediction only] Back     alignment and domain information
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS) Back     alignment and domain information
>PRK02083 imidazole glycerol phosphate synthase subunit HisF; Provisional Back     alignment and domain information
>TIGR01769 GGGP geranylgeranylglyceryl phosphate synthase Back     alignment and domain information
>COG2022 ThiG Uncharacterized enzyme of thiazole biosynthesis [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK08745 ribulose-phosphate 3-epimerase; Provisional Back     alignment and domain information
>PLN02334 ribulose-phosphate 3-epimerase Back     alignment and domain information
>PRK00278 trpC indole-3-glycerol-phosphate synthase; Reviewed Back     alignment and domain information
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>COG0036 Rpe Pentose-5-phosphate-3-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional Back     alignment and domain information
>TIGR00259 thylakoid_BtpA membrane complex biogenesis protein, BtpA family Back     alignment and domain information
>PF04481 DUF561: Protein of unknown function (DUF561); InterPro: IPR007570 Protein in this entry are of unknown function and are found in cyanobacteria and the chloroplasts of algae Back     alignment and domain information
>PRK07695 transcriptional regulator TenI; Provisional Back     alignment and domain information
>COG0107 HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK13307 bifunctional formaldehyde-activating enzyme/3-hexulose-6-phosphate synthase; Provisional Back     alignment and domain information
>PRK14057 epimerase; Provisional Back     alignment and domain information
>COG0106 HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK08091 ribulose-phosphate 3-epimerase; Validated Back     alignment and domain information
>PRK08005 epimerase; Validated Back     alignment and domain information
>cd00429 RPE Ribulose-5-phosphate 3-epimerase (RPE) Back     alignment and domain information
>PRK04169 geranylgeranylglyceryl phosphate synthase-like protein; Reviewed Back     alignment and domain information
>PF00977 His_biosynth: Histidine biosynthesis protein; InterPro: IPR006062 Histidine is formed by several complex and distinct biochemical reactions catalysed by eight enzymes Back     alignment and domain information
>PF00834 Ribul_P_3_epim: Ribulose-phosphate 3 epimerase family; InterPro: IPR000056 Ribulose-phosphate 3-epimerase (5 Back     alignment and domain information
>TIGR01768 GGGP-family geranylgeranylglyceryl phosphate synthase family protein Back     alignment and domain information
>PF03437 BtpA: BtpA family; InterPro: IPR005137 Photosystem I (PSI) is a large protein complex embedded within the photosynthetic thylakoid membrane Back     alignment and domain information
>PRK08649 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed Back     alignment and domain information
>cd04732 HisA HisA Back     alignment and domain information
>TIGR01182 eda Entner-Doudoroff aldolase Back     alignment and domain information
>TIGR00126 deoC deoxyribose-phosphate aldolase Back     alignment and domain information
>TIGR02317 prpB methylisocitrate lyase Back     alignment and domain information
>cd00452 KDPG_aldolase KDPG and KHG aldolase Back     alignment and domain information
>cd04723 HisA_HisF Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase (HisA) and the cyclase subunit of imidazoleglycerol phosphate synthase (HisF) Back     alignment and domain information
>PF00218 IGPS: Indole-3-glycerol phosphate synthase; InterPro: IPR013798 Indole-3-glycerol phosphate synthase (4 Back     alignment and domain information
>COG0214 SNZ1 Pyridoxine biosynthesis enzyme [Coenzyme metabolism] Back     alignment and domain information
>COG0107 HisF Imidazoleglycerol-phosphate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>cd00377 ICL_PEPM Members of the ICL/PEPM enzyme family catalyze either P-C or C-C bond formation/cleavage Back     alignment and domain information
>PRK07028 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator; Validated Back     alignment and domain information
>PRK11320 prpB 2-methylisocitrate lyase; Provisional Back     alignment and domain information
>TIGR01919 hisA-trpF 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase/N-(5'phosphoribosyl)anthranilate isomerase Back     alignment and domain information
>COG0269 SgbH 3-hexulose-6-phosphate synthase and related proteins [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK00043 thiE thiamine-phosphate pyrophosphorylase; Reviewed Back     alignment and domain information
>cd00959 DeoC 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family Back     alignment and domain information
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional Back     alignment and domain information
>cd00564 TMP_TenI Thiamine monophosphate synthase (TMP synthase)/TenI Back     alignment and domain information
>PF13714 PEP_mutase: Phosphoenolpyruvate phosphomutase; PDB: 1ZLP_A 3EOO_C 1UJQ_D 1O5Q_A 2DUA_A 2HJP_A 2HRW_A 2QIW_A 3KZ2_B 3IH1_B Back     alignment and domain information
>PRK14024 phosphoribosyl isomerase A; Provisional Back     alignment and domain information
>PRK00748 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated Back     alignment and domain information
>PLN02617 imidazole glycerol phosphate synthase hisHF Back     alignment and domain information
>PRK13957 indole-3-glycerol-phosphate synthase; Provisional Back     alignment and domain information
>COG0434 SgcQ Predicted TIM-barrel enzyme [General function prediction only] Back     alignment and domain information
>COG1646 Predicted phosphate-binding enzymes, TIM-barrel fold [General function prediction only] Back     alignment and domain information
>PRK06512 thiamine-phosphate pyrophosphorylase; Provisional Back     alignment and domain information
>PRK05581 ribulose-phosphate 3-epimerase; Validated Back     alignment and domain information
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>TIGR02321 Pphn_pyruv_hyd phosphonopyruvate hydrolase Back     alignment and domain information
>TIGR02319 CPEP_Pphonmut carboxyvinyl-carboxyphosphonate phosphorylmutase Back     alignment and domain information
>PLN02446 (5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Back     alignment and domain information
>PRK04302 triosephosphate isomerase; Provisional Back     alignment and domain information
>PRK07114 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>COG0274 DeoC Deoxyribose-phosphate aldolase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd00958 DhnA Class I fructose-1,6-bisphosphate (FBP) aldolases of the archaeal type (DhnA homologs) found in bacteria and archaea Back     alignment and domain information
>PRK07455 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>PRK13585 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional Back     alignment and domain information
>TIGR03572 WbuZ glycosyl amidation-associated protein WbuZ Back     alignment and domain information
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional Back     alignment and domain information
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism] Back     alignment and domain information
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional Back     alignment and domain information
>COG2876 AroA 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase [Amino acid transport and metabolism] Back     alignment and domain information
>PRK00278 trpC indole-3-glycerol-phosphate synthase; Reviewed Back     alignment and domain information
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional Back     alignment and domain information
>PRK14114 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional Back     alignment and domain information
>cd06556 ICL_KPHMT Members of the ICL/PEPM_KPHMT enzyme superfamily catalyze the formation and cleavage of either P-C or C-C bonds Back     alignment and domain information
>PRK13586 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional Back     alignment and domain information
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4 Back     alignment and domain information
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional Back     alignment and domain information
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional Back     alignment and domain information
>PRK07226 fructose-bisphosphate aldolase; Provisional Back     alignment and domain information
>KOG1606 consensus Stationary phase-induced protein, SOR/SNZ family [Coenzyme transport and metabolism] Back     alignment and domain information
>PRK01033 imidazole glycerol phosphate synthase subunit HisF; Provisional Back     alignment and domain information
>PF00977 His_biosynth: Histidine biosynthesis protein; InterPro: IPR006062 Histidine is formed by several complex and distinct biochemical reactions catalysed by eight enzymes Back     alignment and domain information
>TIGR01949 AroFGH_arch predicted phospho-2-dehydro-3-deoxyheptonate aldolase Back     alignment and domain information
>TIGR00007 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Back     alignment and domain information
>PRK06806 fructose-bisphosphate aldolase; Provisional Back     alignment and domain information
>TIGR00734 hisAF_rel hisA/hisF family protein Back     alignment and domain information
>TIGR02129 hisA_euk phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type Back     alignment and domain information
>PRK12457 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional Back     alignment and domain information
>PF02581 TMP-TENI: Thiamine monophosphate synthase/TENI; InterPro: IPR003733 Thiamine monophosphate synthase (TMP) (2 Back     alignment and domain information
>PF01791 DeoC: DeoC/LacD family aldolase; InterPro: IPR002915 This family includes the enzyme deoxyribose-phosphate aldolase, which is involved in nucleotide metabolism Back     alignment and domain information
>cd00405 PRAI Phosphoribosylanthranilate isomerase (PRAI) catalyzes the fourth step of the tryptophan biosynthesis, the conversion of N-(5'- phosphoribosyl)-anthranilate (PRA) to 1-(o-carboxyphenylamino)- 1-deoxyribulose 5-phosphate (CdRP) Back     alignment and domain information
>PLN02617 imidazole glycerol phosphate synthase hisHF Back     alignment and domain information
>TIGR00693 thiE thiamine-phosphate pyrophosphorylase Back     alignment and domain information
>PRK02615 thiamine-phosphate pyrophosphorylase; Provisional Back     alignment and domain information
>cd00408 DHDPS-like Dihydrodipicolinate synthase family Back     alignment and domain information
>TIGR02129 hisA_euk phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase, eukaryotic type Back     alignment and domain information
>COG2513 PrpB PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK03512 thiamine-phosphate pyrophosphorylase; Provisional Back     alignment and domain information
>PRK05283 deoxyribose-phosphate aldolase; Provisional Back     alignment and domain information
>COG0134 TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01859 fruc_bis_ald_ fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist Back     alignment and domain information
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants Back     alignment and domain information
>PLN02460 indole-3-glycerol-phosphate synthase Back     alignment and domain information
>PRK13586 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional Back     alignment and domain information
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases Back     alignment and domain information
>PRK13802 bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta; Provisional Back     alignment and domain information
>cd02812 PcrB_like PcrB_like proteins Back     alignment and domain information
>PF01884 PcrB: PcrB family; InterPro: IPR008205 This entry represents geranylgeranylglyceryl phosphate (GGGP) synthase, which is a prenyltransferase that catalyses the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P) Back     alignment and domain information
>cd04723 HisA_HisF Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase (HisA) and the cyclase subunit of imidazoleglycerol phosphate synthase (HisF) Back     alignment and domain information
>KOG3111 consensus D-ribulose-5-phosphate 3-epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK14114 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional Back     alignment and domain information
>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4 Back     alignment and domain information
>cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides Back     alignment and domain information
>PRK06801 hypothetical protein; Provisional Back     alignment and domain information
>cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily Back     alignment and domain information
>TIGR00674 dapA dihydrodipicolinate synthase Back     alignment and domain information
>PLN02446 (5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase Back     alignment and domain information
>PLN03033 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional Back     alignment and domain information
>TIGR01919 hisA-trpF 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase/N-(5'phosphoribosyl)anthranilate isomerase Back     alignment and domain information
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase Back     alignment and domain information
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional Back     alignment and domain information
>PRK09427 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; Provisional Back     alignment and domain information
>PRK08999 hypothetical protein; Provisional Back     alignment and domain information
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional Back     alignment and domain information
>PRK13306 ulaD 3-keto-L-gulonate-6-phosphate decarboxylase; Provisional Back     alignment and domain information
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed Back     alignment and domain information
>PF00478 IMPDH: IMP dehydrogenase / GMP reductase domain; InterPro: IPR001093 Synonym(s): Inosine-5'-monophosphate dehydrogenase, Inosinic acid dehydrogenase; Synonym(s): Guanosine 5'-monophosphate oxidoreductase This entry contains two related enzymes IMP dehydrogenase and GMP reducatase Back     alignment and domain information
>PRK13813 orotidine 5'-phosphate decarboxylase; Provisional Back     alignment and domain information
>PRK05198 2-dehydro-3-deoxyphosphooctonate aldolase; Provisional Back     alignment and domain information
>TIGR01362 KDO8P_synth 3-deoxy-8-phosphooctulonate synthase Back     alignment and domain information
>cd04733 OYE_like_2_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 2 Back     alignment and domain information
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed Back     alignment and domain information
>PRK00311 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed Back     alignment and domain information
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional Back     alignment and domain information
>COG0106 HisA Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR01302 IMP_dehydrog inosine-5'-monophosphate dehydrogenase Back     alignment and domain information
>cd06557 KPHMT-like Ketopantoate hydroxymethyltransferase (KPHMT) is the first enzyme in the pantothenate biosynthesis pathway Back     alignment and domain information
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Back     alignment and domain information
>TIGR00683 nanA N-acetylneuraminate lyase Back     alignment and domain information
>PRK12290 thiE thiamine-phosphate pyrophosphorylase; Reviewed Back     alignment and domain information
>PRK10550 tRNA-dihydrouridine synthase C; Provisional Back     alignment and domain information
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid) Back     alignment and domain information
>cd02803 OYE_like_FMN_family Old yellow enzyme (OYE)-like FMN binding domain Back     alignment and domain information
>PRK04147 N-acetylneuraminate lyase; Provisional Back     alignment and domain information
>PRK03170 dihydrodipicolinate synthase; Provisional Back     alignment and domain information
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis Back     alignment and domain information
>PRK07315 fructose-bisphosphate aldolase; Provisional Back     alignment and domain information
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional Back     alignment and domain information
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK05848 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>KOG1799 consensus Dihydropyrimidine dehydrogenase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK13523 NADPH dehydrogenase NamA; Provisional Back     alignment and domain information
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>cd02931 ER_like_FMN Enoate reductase (ER)-like FMN-binding domain Back     alignment and domain information
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily Back     alignment and domain information
>PF03932 CutC: CutC family; InterPro: IPR005627 Copper transport in Escherichia coli is mediated by the products of at least six genes, cutA, cutB, cutC, cutD, cutE, and cutF Back     alignment and domain information
>PLN02274 inosine-5'-monophosphate dehydrogenase Back     alignment and domain information
>cd02933 OYE_like_FMN Old yellow enzyme (OYE)-like FMN binding domain Back     alignment and domain information
>PF04131 NanE: Putative N-acetylmannosamine-6-phosphate epimerase; InterPro: IPR007260 This family represents a putative ManNAc-6-P-to-GlcNAc-6P epimerase in the N-acetylmannosamine (ManNAc) utilization pathway found mainly in pathogenic bacteria for the reaction: N-acyl-D-glucosamine 6-phosphate = N-acyl-D-mannosamine 6-phosphate It is probably encoded by the yhcJ gene [] Back     alignment and domain information
>cd04734 OYE_like_3_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 3 Back     alignment and domain information
>cd04727 pdxS PdxS is a subunit of the pyridoxal 5'-phosphate (PLP) synthase, an important enzyme in deoxyxylulose 5-phosphate (DXP)-independent pathway for de novo biosynthesis of PLP, present in some eubacteria, in archaea, fungi, plants, plasmodia, and some metazoa Back     alignment and domain information
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase Back     alignment and domain information
>cd02932 OYE_YqiM_FMN Old yellow enzyme (OYE) YqjM-like FMN binding domain Back     alignment and domain information
>cd02801 DUS_like_FMN Dihydrouridine synthase-like (DUS-like) FMN-binding domain Back     alignment and domain information
>PLN02898 HMP-P kinase/thiamin-monophosphate pyrophosphorylase Back     alignment and domain information
>TIGR03569 NeuB_NnaB N-acetylneuraminate synthase Back     alignment and domain information
>cd00381 IMPDH IMPDH: The catalytic domain of the inosine monophosphate dehydrogenase Back     alignment and domain information
>TIGR00734 hisAF_rel hisA/hisF family protein Back     alignment and domain information
>cd04740 DHOD_1B_like Dihydroorotate dehydrogenase (DHOD) class 1B FMN-binding domain Back     alignment and domain information
>PRK05567 inosine 5'-monophosphate dehydrogenase; Reviewed Back     alignment and domain information
>PRK00230 orotidine 5'-phosphate decarboxylase; Reviewed Back     alignment and domain information
>TIGR00736 nifR3_rel_arch TIM-barrel protein, putative Back     alignment and domain information
>TIGR00222 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase Back     alignment and domain information
>TIGR00343 pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 Back     alignment and domain information
>cd00377 ICL_PEPM Members of the ICL/PEPM enzyme family catalyze either P-C or C-C bond formation/cleavage Back     alignment and domain information
>PRK07114 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>PLN02591 tryptophan synthase Back     alignment and domain information
>PRK12858 tagatose 1,6-diphosphate aldolase; Reviewed Back     alignment and domain information
>PLN02424 ketopantoate hydroxymethyltransferase Back     alignment and domain information
>PRK01130 N-acetylmannosamine-6-phosphate 2-epimerase; Provisional Back     alignment and domain information
>cd00331 IGPS Indole-3-glycerol phosphate synthase (IGPS); an enzyme in the tryptophan biosynthetic pathway, catalyzing the ring closure reaction of 1-(o-carboxyphenylamino)-1-deoxyribulose-5-phosphate (CdRP) to indole-3-glycerol phosphate (IGP), accompanied by the release of carbon dioxide and water Back     alignment and domain information
>PRK11572 copper homeostasis protein CutC; Provisional Back     alignment and domain information
>PRK11320 prpB 2-methylisocitrate lyase; Provisional Back     alignment and domain information
>cd00945 Aldolase_Class_I Class I aldolases Back     alignment and domain information
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional Back     alignment and domain information
>PRK08185 hypothetical protein; Provisional Back     alignment and domain information
>PRK06256 biotin synthase; Validated Back     alignment and domain information
>PRK10415 tRNA-dihydrouridine synthase B; Provisional Back     alignment and domain information
>TIGR01303 IMP_DH_rel_1 IMP dehydrogenase family protein Back     alignment and domain information
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic Back     alignment and domain information
>PF01207 Dus: Dihydrouridine synthase (Dus); InterPro: IPR001269 Members of this family catalyse the reduction of the 5,6-double bond of a uridine residue on tRNA Back     alignment and domain information
>cd02930 DCR_FMN 2,4-dienoyl-CoA reductase (DCR) FMN-binding domain Back     alignment and domain information
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA) Back     alignment and domain information
>TIGR00737 nifR3_yhdG putative TIM-barrel protein, nifR3 family Back     alignment and domain information
>cd00956 Transaldolase_FSA Transaldolase-like fructose-6-phosphate aldolases (FSA) found in bacteria and archaea, which are member of the MipB/TalC subfamily of class I aldolases Back     alignment and domain information
>PRK07565 dihydroorotate dehydrogenase 2; Reviewed Back     alignment and domain information
>COG0800 Eda 2-keto-3-deoxy-6-phosphogluconate aldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd04735 OYE_like_4_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 4 Back     alignment and domain information
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART) Back     alignment and domain information
>TIGR01306 GMP_reduct_2 guanosine monophosphate reductase, bacterial Back     alignment and domain information
>PRK07998 gatY putative fructose-1,6-bisphosphate aldolase; Reviewed Back     alignment and domain information
>TIGR02317 prpB methylisocitrate lyase Back     alignment and domain information
>PRK12376 putative translaldolase; Provisional Back     alignment and domain information
>KOG4175 consensus Tryptophan synthase alpha chain [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR00078 nadC nicotinate-nucleotide pyrophosphorylase Back     alignment and domain information
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional Back     alignment and domain information
>PRK07428 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>COG0042 tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PRK09517 multifunctional thiamine-phosphate pyrophosphorylase/synthase/phosphomethylpyrimidine kinase; Provisional Back     alignment and domain information
>PRK12656 fructose-6-phosphate aldolase; Reviewed Back     alignment and domain information
>TIGR00262 trpA tryptophan synthase, alpha subunit Back     alignment and domain information
>cd04729 NanE N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate Back     alignment and domain information
>cd08210 RLP_RrRLP Ribulose bisphosphate carboxylase like proteins (RLPs) similar to R Back     alignment and domain information
>PRK08227 autoinducer 2 aldolase; Validated Back     alignment and domain information
>PRK08255 salicylyl-CoA 5-hydroxylase; Reviewed Back     alignment and domain information
>PRK08508 biotin synthase; Provisional Back     alignment and domain information
>PRK10605 N-ethylmaleimide reductase; Provisional Back     alignment and domain information
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd08205 RuBisCO_IV_RLP Ribulose bisphosphate carboxylase like proteins, Rubisco-Form IV Back     alignment and domain information
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>COG3010 NanE Putative N-acetylmannosamine-6-phosphate epimerase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism] Back     alignment and domain information
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS) Back     alignment and domain information
>cd01573 modD_like ModD; Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase) present in some modABC operons in bacteria, which are involved in molybdate transport Back     alignment and domain information
>cd00408 DHDPS-like Dihydrodipicolinate synthase family Back     alignment and domain information
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated Back     alignment and domain information
>TIGR02134 transald_staph transaldolase Back     alignment and domain information
>PRK13957 indole-3-glycerol-phosphate synthase; Provisional Back     alignment and domain information
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase Back     alignment and domain information
>TIGR02319 CPEP_Pphonmut carboxyvinyl-carboxyphosphonate phosphorylmutase Back     alignment and domain information
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases Back     alignment and domain information
>PRK05581 ribulose-phosphate 3-epimerase; Validated Back     alignment and domain information
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed Back     alignment and domain information
>TIGR03128 RuMP_HxlA 3-hexulose-6-phosphate synthase Back     alignment and domain information
>cd04747 OYE_like_5_FMN Old yellow enzyme (OYE)-related FMN binding domain, group 5 Back     alignment and domain information
>COG2513 PrpB PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK05742 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>TIGR01182 eda Entner-Doudoroff aldolase Back     alignment and domain information
>COG3684 LacD Tagatose-1,6-bisphosphate aldolase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional Back     alignment and domain information
>PF00793 DAHP_synth_1: DAHP synthetase I family; InterPro: IPR006218 Members of the 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthetase family catalyse the first step in aromatic amino acid biosynthesis from chorismate Back     alignment and domain information
>cd03174 DRE_TIM_metallolyase DRE-TIM metallolyase superfamily Back     alignment and domain information
>cd04738 DHOD_2_like Dihydroorotate dehydrogenase (DHOD) class 2 Back     alignment and domain information
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA) Back     alignment and domain information
>PRK05437 isopentenyl pyrophosphate isomerase; Provisional Back     alignment and domain information
>PRK08072 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>TIGR02320 PEP_mutase phosphoenolpyruvate phosphomutase Back     alignment and domain information
>PRK07709 fructose-bisphosphate aldolase; Provisional Back     alignment and domain information
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional Back     alignment and domain information
>cd00947 TBP_aldolase_IIB Tagatose-1,6-bisphosphate (TBP) aldolase and related Type B Class II aldolases Back     alignment and domain information
>COG4981 Enoyl reductase domain of yeast-type FAS1 [Lipid metabolism] Back     alignment and domain information
>cd01572 QPRTase Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes Back     alignment and domain information
>cd08207 RLP_NonPhot Ribulose bisphosphate carboxylase like proteins from nonphototrophic bacteria Back     alignment and domain information
>TIGR01858 tag_bisphos_ald class II aldolase, tagatose bisphosphate family Back     alignment and domain information
>TIGR01037 pyrD_sub1_fam dihydroorotate dehydrogenase (subfamily 1) family protein Back     alignment and domain information
>TIGR02321 Pphn_pyruv_hyd phosphonopyruvate hydrolase Back     alignment and domain information
>TIGR03326 rubisco_III ribulose bisphosphate carboxylase, type III Back     alignment and domain information
>TIGR00433 bioB biotin synthetase Back     alignment and domain information
>PRK09485 mmuM homocysteine methyltransferase; Provisional Back     alignment and domain information
>cd06556 ICL_KPHMT Members of the ICL/PEPM_KPHMT enzyme superfamily catalyze the formation and cleavage of either P-C or C-C bonds Back     alignment and domain information
>PF03740 PdxJ: Pyridoxal phosphate biosynthesis protein PdxJ; InterPro: IPR004569 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal) Back     alignment and domain information
>PRK06852 aldolase; Validated Back     alignment and domain information
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis Back     alignment and domain information
>PRK08385 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>cd02911 arch_FMN Archeal FMN-binding domain Back     alignment and domain information
>PRK05286 dihydroorotate dehydrogenase 2; Reviewed Back     alignment and domain information
>cd04739 DHOD_like Dihydroorotate dehydrogenase (DHOD) like proteins Back     alignment and domain information
>cd01568 QPRTase_NadC Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide pyrophosphorylase, is involved in the de novo synthesis of NAD in both prokaryotes and eukaryotes Back     alignment and domain information
>PRK09195 gatY tagatose-bisphosphate aldolase; Reviewed Back     alignment and domain information
>cd00959 DeoC 2-deoxyribose-5-phosphate aldolase (DERA) of the DeoC family Back     alignment and domain information
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea Back     alignment and domain information
>cd04725 OMP_decarboxylase_like Orotidine 5'-phosphate decarboxylase (ODCase) is a dimeric enzyme that decarboxylates orotidine 5'-monophosphate (OMP) to form uridine 5'-phosphate (UMP), an essential step in the pyrimidine biosynthetic pathway Back     alignment and domain information
>PLN02979 glycolate oxidase Back     alignment and domain information
>TIGR00683 nanA N-acetylneuraminate lyase Back     alignment and domain information
>cd06557 KPHMT-like Ketopantoate hydroxymethyltransferase (KPHMT) is the first enzyme in the pantothenate biosynthesis pathway Back     alignment and domain information
>PRK12737 gatY tagatose-bisphosphate aldolase; Reviewed Back     alignment and domain information
>COG1902 NemA NADH:flavin oxidoreductases, Old Yellow Enzyme family [Energy production and conversion] Back     alignment and domain information
>cd02929 TMADH_HD_FMN Trimethylamine dehydrogenase (TMADH) and histamine dehydrogenase (HD) FMN-binding domain Back     alignment and domain information
>PRK12738 kbaY tagatose-bisphosphate aldolase; Reviewed Back     alignment and domain information
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4 Back     alignment and domain information
>PF01729 QRPTase_C: Quinolinate phosphoribosyl transferase, C-terminal domain; InterPro: IPR002638 Quinolinate phosphoribosyl transferase (QPRTase) or nicotinate-nucleotide pyrophosphorylase 2 Back     alignment and domain information
>TIGR00674 dapA dihydrodipicolinate synthase Back     alignment and domain information
>PLN02417 dihydrodipicolinate synthase Back     alignment and domain information
>PF04481 DUF561: Protein of unknown function (DUF561); InterPro: IPR007570 Protein in this entry are of unknown function and are found in cyanobacteria and the chloroplasts of algae Back     alignment and domain information
>PRK04147 N-acetylneuraminate lyase; Provisional Back     alignment and domain information
>PF01116 F_bP_aldolase: Fructose-bisphosphate aldolase class-II; InterPro: IPR000771 Fructose-bisphosphate aldolase [, ] is a glycolytic enzyme that catalyses the reversible aldol cleavage or condensation of fructose-1,6-bisphosphate into dihydroxyacetone-phosphate and glyceraldehyde 3-phosphate Back     alignment and domain information
>cd02940 DHPD_FMN Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain Back     alignment and domain information
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid) Back     alignment and domain information
>PLN02389 biotin synthase Back     alignment and domain information
>cd03329 MR_like_4 Mandelate racemase (MR)-like subfamily of the enolase superfamily, subgroup 4 Back     alignment and domain information
>PRK11815 tRNA-dihydrouridine synthase A; Provisional Back     alignment and domain information
>PRK05458 guanosine 5'-monophosphate oxidoreductase; Provisional Back     alignment and domain information
>PRK04208 rbcL ribulose bisophosphate carboxylase; Reviewed Back     alignment and domain information
>cd04741 DHOD_1A_like Dihydroorotate dehydrogenase (DHOD) class 1A FMN-binding domain Back     alignment and domain information
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants Back     alignment and domain information
>PRK07094 biotin synthase; Provisional Back     alignment and domain information
>PRK02227 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Back     alignment and domain information
>cd08209 RLP_DK-MTP-1-P-enolase 2,3-diketo-5-methylthiopentyl-1-phosphate enolase Back     alignment and domain information
>TIGR01232 lacD tagatose 1,6-diphosphate aldolase Back     alignment and domain information
>cd01573 modD_like ModD; Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase) present in some modABC operons in bacteria, which are involved in molybdate transport Back     alignment and domain information
>PRK04161 tagatose 1,6-diphosphate aldolase; Reviewed Back     alignment and domain information
>TIGR03217 4OH_2_O_val_ald 4-hydroxy-2-oxovalerate aldolase Back     alignment and domain information
>PF09370 TIM-br_sig_trns: TIM-barrel signal transduction protein; InterPro: IPR009215 Members of this family are predicted to have a TIM barrel fold, based on PSI-BLAST analysis (iteration 4) and on SCOP prediction (using SMART) Back     alignment and domain information
>PRK08610 fructose-bisphosphate aldolase; Reviewed Back     alignment and domain information
>PRK15108 biotin synthase; Provisional Back     alignment and domain information
>TIGR01740 pyrF orotidine 5'-phosphate decarboxylase, subfamily 1 Back     alignment and domain information
>TIGR02151 IPP_isom_2 isopentenyl-diphosphate delta-isomerase, type 2 Back     alignment and domain information
>COG0502 BioB Biotin synthase and related enzymes [Coenzyme metabolism] Back     alignment and domain information
>TIGR00126 deoC deoxyribose-phosphate aldolase Back     alignment and domain information
>TIGR03586 PseI pseudaminic acid synthase Back     alignment and domain information
>PRK07428 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PRK09722 allulose-6-phosphate 3-epimerase; Provisional Back     alignment and domain information
>PLN02334 ribulose-phosphate 3-epimerase Back     alignment and domain information
>PRK03170 dihydrodipicolinate synthase; Provisional Back     alignment and domain information
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea Back     alignment and domain information
>PRK09196 fructose-1,6-bisphosphate aldolase; Reviewed Back     alignment and domain information
>TIGR00742 yjbN tRNA dihydrouridine synthase A Back     alignment and domain information
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion] Back     alignment and domain information
>COG3142 CutC Uncharacterized protein involved in copper resistance [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK08385 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>TIGR00167 cbbA ketose-bisphosphate aldolases Back     alignment and domain information
>PRK14042 pyruvate carboxylase subunit B; Provisional Back     alignment and domain information
>PRK00311 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase; Reviewed Back     alignment and domain information
>PF02548 Pantoate_transf: Ketopantoate hydroxymethyltransferase; InterPro: IPR003700 The panB gene from Escherichia coli encodes the first enzyme of the pantothenate biosynthesis pathway, ketopantoate hydroxymethyltransferase (KPHMT) 2 Back     alignment and domain information
>TIGR01521 FruBisAldo_II_B fructose-bisphosphate aldolase, class II, Calvin cycle subtype Back     alignment and domain information
>PRK12331 oxaloacetate decarboxylase; Provisional Back     alignment and domain information
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>PLN02535 glycolate oxidase Back     alignment and domain information
>PRK07896 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PRK12330 oxaloacetate decarboxylase; Provisional Back     alignment and domain information
>cd02809 alpha_hydroxyacid_oxid_FMN Family of homologous FMN-dependent alpha-hydroxyacid oxidizing enzymes Back     alignment and domain information
>PF13714 PEP_mutase: Phosphoenolpyruvate phosphomutase; PDB: 1ZLP_A 3EOO_C 1UJQ_D 1O5Q_A 2DUA_A 2HJP_A 2HRW_A 2QIW_A 3KZ2_B 3IH1_B Back     alignment and domain information
>PRK06559 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>cd02922 FCB2_FMN Flavocytochrome b2 (FCB2) FMN-binding domain Back     alignment and domain information
>PRK05742 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PF00682 HMGL-like: HMGL-like of this family is not conserved in other members Back     alignment and domain information
>PRK05835 fructose-bisphosphate aldolase; Provisional Back     alignment and domain information
>KOG4201 consensus Anthranilate synthase component II [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02417 dihydrodipicolinate synthase Back     alignment and domain information
>PRK07896 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PRK12399 tagatose 1,6-diphosphate aldolase; Reviewed Back     alignment and domain information
>PLN02716 nicotinate-nucleotide diphosphorylase (carboxylating) Back     alignment and domain information
>TIGR01334 modD putative molybdenum utilization protein ModD Back     alignment and domain information
>PRK09140 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Reviewed Back     alignment and domain information
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain Back     alignment and domain information
>PF00724 Oxidored_FMN: NADH:flavin oxidoreductase / NADH oxidase family; InterPro: IPR001155 The TIM-barrel fold is a closed barrel structure composed of an eight-fold repeat of beta-alpha units, where the eight parallel beta strands on the inside are covered by the eight alpha helices on the outside [] Back     alignment and domain information
>PF00682 HMGL-like: HMGL-like of this family is not conserved in other members Back     alignment and domain information
>cd08213 RuBisCO_large_III Ribulose bisphosphate carboxylase large chain, Form III Back     alignment and domain information
>PLN02493 probable peroxisomal (S)-2-hydroxy-acid oxidase Back     alignment and domain information
>PRK12857 fructose-1,6-bisphosphate aldolase; Reviewed Back     alignment and domain information
>PRK06106 nicotinate-nucleotide pyrophosphorylase; Provisional Back     alignment and domain information
>PF01680 SOR_SNZ: SOR/SNZ family; InterPro: IPR001852 Snz1p is a highly conserved protein involved in growth arrest in Saccharomyces cerevisiae (Baker's yeast) [] Back     alignment and domain information
>KOG4175 consensus Tryptophan synthase alpha chain [Amino acid transport and metabolism] Back     alignment and domain information
>PRK08318 dihydropyrimidine dehydrogenase subunit B; Validated Back     alignment and domain information
>cd04722 TIM_phosphate_binding TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure Back     alignment and domain information
>COG0135 TrpF Phosphoribosylanthranilate isomerase [Amino acid transport and metabolism] Back     alignment and domain information
>cd02811 IDI-2_FMN Isopentenyl-diphosphate:dimethylallyl diphosphate isomerase type 2 (IDI-2) FMN-binding domain Back     alignment and domain information
>PRK09016 quinolinate phosphoribosyltransferase; Validated Back     alignment and domain information
>PRK04452 acetyl-CoA decarbonylase/synthase complex subunit delta; Provisional Back     alignment and domain information
>cd07943 DRE_TIM_HOA 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query422
1h7w_A 1025 Dihydropyrimidine Dehydrogenase (Dpd) From Pig Leng 5e-60
1h7x_A 1025 Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ter 7e-59
1ep1_A311 Crystal Structure Of Lactococcus Lactis Dihydroorot 2e-21
1jub_A311 The K136e Mutant Of Lactococcus Lactis Dihydroorota 3e-16
1jqv_A311 The K213e Mutant Of Lactococcus Lactis Dihydroorota 3e-16
1jrc_A311 The N67a Mutant Of Lactococcus Lactis Dihydroorotat 9e-16
1dor_A311 Dihydroorotate Dehydrogenase A From Lactococcus Lac 9e-16
1jqx_A311 The R57a Mutant Of Lactococcus Lactis Dihydroorotat 8e-15
1jrb_A311 The P56a Mutant Of Lactococcus Lactis Dihydroorotat 1e-14
3oix_A345 Crystal Structure Of The Putative Dihydroorotate De 2e-12
2e68_A314 Crystal Structure Of Trypanosoma Cruzi Dihydroorota 1e-11
3c3n_A312 Crystal Structure Of Dihydroorotate Dehydrogenase F 2e-11
2djl_A314 Crystal Structure Of Trypanosoma Cruzi Dihydroorota 2e-11
2b4g_A317 Dihydroorotate Dehydrogenase Length = 317 2e-10
3gye_A354 Didydroorotate Dehydrogenase From Leishmania Major 7e-08
3mhu_A346 Crystal Structure Of Dihydroorotate Dehydrogenase F 8e-08
3tro_A354 Crystal Structure Of Leishmania Major Dihydroorotat 9e-08
3tjx_A354 Crystal Structure Of Leishmania Major Dihydroorotat 9e-08
3c61_A314 Crystal Structure Of Dihydroorotate Dehydrogenase F 1e-07
1uum_A372 Rat Dihydroorotate Dehydrogenase (Dhod)in Complex W 2e-06
2wv8_A365 Complex Of Human Dihydroorotate Dehydrogenase With 3e-05
2fpt_A395 Dual Binding Mode Of A Novel Series Of Dhodh Inhibi 3e-05
3kvj_A390 Crystal Structure Of Human Dihydroorotate Dehydroge 3e-05
2b0m_A393 Human Dihydroorotate Dehydrogenase Bound To A Novel 3e-05
3u2o_A395 Dihydroorotate Dehydrogenase (Dhodh) Crystal Struct 3e-05
1d3g_A367 Human Dihydroorotate Dehydrogenase Complexed With B 3e-05
>pdb|1H7W|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig Length = 1025 Back     alignment and structure 
Iteration: 1

 Score =  228 bits (581), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 125/335 (37%), Positives = 189/335 (56%), Gaps = 20/335 (5%)
Query: 46  DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYA 105
           D+S+ + GL+  NPF + S  P T+ ++++RAF+ GWG  + KT SLD   V NV+PR  
Sbjct: 532 DISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIV 591
Query: 106 RLRAGANGSAKGQIIG-----WENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEY 160
           R      G+  G + G     + NIELIS++      +   +LKA +PD I+IASIM  Y
Sbjct: 592 R------GTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSY 645
Query: 161 NKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVP 220
           NK  W EL  + E +G DA+E+N SCPHGM ER MG A GQD  L+  +C W+     +P
Sbjct: 646 NKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIP 705
Query: 221 VWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEG--YSTPGG 278
            +AK+TPN+TDI   AR A   G++GV+A NT+  +MG+      P P V     +T GG
Sbjct: 706 FFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADG-TPWPAVGAGKRTTYGG 764
Query: 279 YSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTG 338
            S  A+ PIAL  V +IA+ +        + +   GG+++     +F+  GA+ +QVC+ 
Sbjct: 765 VSGTAIRPIALRAVTTIARALPG------FPILATGGIDSAESGLQFLHSGASVLQVCSA 818
Query: 339 VMMHGYGLVKRLCEELKDFMKMHNFSSIEDFRGAS 373
           V    + +++  C  LK  + + +   ++ + G S
Sbjct: 819 VQNQDFTVIQDYCTGLKALLYLKSIEELQGWDGQS 853
>pdb|1H7X|A Chain A, Dihydropyrimidine Dehydrogenase (Dpd) From Pig, Ternary Complex Of A Mutant Enzyme (C671a), Nadph And 5- Fluorouracil Length = 1025 Back     alignment and structure
>pdb|1EP1|A Chain A, Crystal Structure Of Lactococcus Lactis Dihydroorotate Dehydrogenase B Length = 311 Back     alignment and structure
>pdb|1JUB|A Chain A, The K136e Mutant Of Lactococcus Lactis Dihydroorotate Dehydrogenase A Length = 311 Back     alignment and structure
>pdb|1JQV|A Chain A, The K213e Mutant Of Lactococcus Lactis Dihydroorotate Dehydrogenase A Length = 311 Back     alignment and structure
>pdb|1JRC|A Chain A, The N67a Mutant Of Lactococcus Lactis Dihydroorotate Dehydrogenase A Length = 311 Back     alignment and structure
>pdb|1DOR|A Chain A, Dihydroorotate Dehydrogenase A From Lactococcus Lactis Length = 311 Back     alignment and structure
>pdb|1JQX|A Chain A, The R57a Mutant Of Lactococcus Lactis Dihydroorotate Dehydrogenase A Length = 311 Back     alignment and structure
>pdb|1JRB|A Chain A, The P56a Mutant Of Lactococcus Lactis Dihydroorotate Dehydrogenase A Length = 311 Back     alignment and structure
>pdb|3OIX|A Chain A, Crystal Structure Of The Putative Dihydroorotate Dehydrogenase From Streptococcus Mutans Length = 345 Back     alignment and structure
>pdb|2E68|A Chain A, Crystal Structure Of Trypanosoma Cruzi Dihydroorotate Dehydrogenase In Complex With Dihydroorotate Length = 314 Back     alignment and structure
>pdb|3C3N|A Chain A, Crystal Structure Of Dihydroorotate Dehydrogenase From Trypanosoma Cruzi Strain Y Length = 312 Back     alignment and structure
>pdb|2DJL|A Chain A, Crystal Structure Of Trypanosoma Cruzi Dihydroorotate Dehydrogenase In Complex With Succinate Length = 314 Back     alignment and structure
>pdb|2B4G|A Chain A, Dihydroorotate Dehydrogenase Length = 317 Back     alignment and structure
>pdb|3GYE|A Chain A, Didydroorotate Dehydrogenase From Leishmania Major Length = 354 Back     alignment and structure
>pdb|3MHU|A Chain A, Crystal Structure Of Dihydroorotate Dehydrogenase From Leishmania Major In Complex With 5-Nitroorotic Acid Length = 346 Back     alignment and structure
>pdb|3TRO|A Chain A, Crystal Structure Of Leishmania Major Dihydroorotate Dehydrogenase Mutant D171a Length = 354 Back     alignment and structure
>pdb|3TJX|A Chain A, Crystal Structure Of Leishmania Major Dihydroorotate Dehydrogenase Mutant H174a Length = 354 Back     alignment and structure
>pdb|3C61|A Chain A, Crystal Structure Of Dihydroorotate Dehydrogenase From Leishmania Donovani Length = 314 Back     alignment and structure
>pdb|1UUM|A Chain A, Rat Dihydroorotate Dehydrogenase (Dhod)in Complex With Atovaquone Length = 372 Back     alignment and structure
>pdb|2WV8|A Chain A, Complex Of Human Dihydroorotate Dehydrogenase With The Inhibitor 221290 Length = 365 Back     alignment and structure
>pdb|2FPT|A Chain A, Dual Binding Mode Of A Novel Series Of Dhodh Inhibitors Length = 395 Back     alignment and structure
>pdb|3KVJ|A Chain A, Crystal Structure Of Human Dihydroorotate Dehydrogenase (Dhodh) With Amino-Benzoic Acid Inhibitor 105 At 1.94a Resolution Length = 390 Back     alignment and structure
>pdb|2B0M|A Chain A, Human Dihydroorotate Dehydrogenase Bound To A Novel Inhibitor Length = 393 Back     alignment and structure
>pdb|3U2O|A Chain A, Dihydroorotate Dehydrogenase (Dhodh) Crystal Structure In Complex With Small Molecule Inhibitor Length = 395 Back     alignment and structure
>pdb|1D3G|A Chain A, Human Dihydroorotate Dehydrogenase Complexed With Brequinar Analog Length = 367 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query422
1ep3_A311 Dihydroorotate dehydrogenase B (PYRD subunit); het 1e-116
1gte_A 1025 Dihydropyrimidine dehydrogenase; electron transfer 1e-114
1jub_A311 Dihydroorotate dehydrogenase A; homodimer, alpha-b 1e-77
3oix_A345 Putative dihydroorotate dehydrogenase; dihydrooro 2e-72
3gz3_A354 Dihydroorotate dehydrogenase, putative; dhodh, oxi 5e-65
2e6f_A314 Dihydroorotate dehydrogenase; chagas disease, pyri 2e-63
1tv5_A443 Dhodehase, dihydroorotate dehydrogenase homolog, m 8e-15
3zwt_A367 Dihydroorotate dehydrogenase (quinone), mitochond; 1e-13
3i65_A415 Dihydroorotate dehydrogenase homolog, mitochondria 5e-13
1f76_A336 Dihydroorotate dehydrogenase; monomer, alpha-beta- 8e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-07
1p0k_A349 Isopentenyl-diphosphate delta-isomerase; terpene b 6e-05
3vkj_A368 Isopentenyl-diphosphate delta-isomerase; type 2 is 8e-05
1vcf_A332 Isopentenyl-diphosphate delta-isomerase; TIM barre 1e-04
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A* Length = 311 Back     alignment and structure
 Score =  341 bits (877), Expect = e-116
 Identities = 83/330 (25%), Positives = 144/330 (43%), Gaps = 29/330 (8%)

Query: 44  EPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPR 103
              LS+ + GL + NP +  SG  G      K       G+++ K  +L   +  N TPR
Sbjct: 4   NNRLSVKLPGLDLKNPIIPASGCFGFGEEYAKYYDLNKLGSIMVKATTLHP-RFGNPTPR 62

Query: 104 YARLRAGANGSAKGQIIGWENIELISDRPLETMLKE-FKQLKALYPDKILIASIMEEYNK 162
            A   +G             N   + +  LE ++ E    L   +P+  +IA++      
Sbjct: 63  VAETASGML-----------NAIGLQNPGLEVIMTEKLPWLNENFPELPIIANVAGSEEA 111

Query: 163 AAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVW 222
                     +   + AIE+N SCP+    +  G A G D  +   +     A + VP++
Sbjct: 112 DYVAVCAKIGDAANVKAIELNISCPN---VKHGGQAFGTDPEVAAALVKACKAVSKVPLY 168

Query: 223 AKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCVEGYSTPGGYSCK 282
            K++PN+TDI   A+    +G++G++ INT+M  +  DLKT +P       +  GG S  
Sbjct: 169 VKLSPNVTDIVPIAKAVEAAGADGLTMINTLMG-VRFDLKTRQPILA----NITGGLSGP 223

Query: 283 AVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMH 342
           A+ P+AL  +  +A+ +       D  + G+GGV    D  E  + GA+ V V T     
Sbjct: 224 AIKPVALKLIHQVAQDV-------DIPIIGMGGVANAQDVLEMYMAGASAVAVGTANFAD 276

Query: 343 GYGLVKRLCEELKDFMKMHNFSSIEDFRGA 372
            + +  ++ ++L + M  +   S+E     
Sbjct: 277 PF-VCPKIIDKLPELMDQYRIESLESLIQE 305
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A* Length = 1025 Back     alignment and structure
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A* Length = 311 Back     alignment and structure
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans} Length = 345 Back     alignment and structure
>3gz3_A Dihydroorotate dehydrogenase, putative; dhodh, oxidoreductase; HET: FMN ORO; 1.90A {Leishmania major} PDB: 3gye_A* Length = 354 Back     alignment and structure
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A* Length = 314 Back     alignment and structure
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1 Length = 443 Back     alignment and structure
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ... Length = 367 Back     alignment and structure
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A* Length = 415 Back     alignment and structure
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1 Length = 336 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A* Length = 349 Back     alignment and structure
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A* Length = 368 Back     alignment and structure
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A* Length = 332 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query422
4ef8_A354 Dihydroorotate dehydrogenase; phenyl isothiocyanat 100.0
3oix_A345 Putative dihydroorotate dehydrogenase; dihydrooro 100.0
3i65_A415 Dihydroorotate dehydrogenase homolog, mitochondria 100.0
3zwt_A367 Dihydroorotate dehydrogenase (quinone), mitochond; 100.0
3tjx_A354 Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh 100.0
1tv5_A443 Dhodehase, dihydroorotate dehydrogenase homolog, m 100.0
1jub_A311 Dihydroorotate dehydrogenase A; homodimer, alpha-b 100.0
2e6f_A314 Dihydroorotate dehydrogenase; chagas disease, pyri 100.0
1gte_A 1025 Dihydropyrimidine dehydrogenase; electron transfer 100.0
1ep3_A311 Dihydroorotate dehydrogenase B (PYRD subunit); het 100.0
1f76_A336 Dihydroorotate dehydrogenase; monomer, alpha-beta- 100.0
1p0k_A349 Isopentenyl-diphosphate delta-isomerase; terpene b 99.96
3b0p_A350 TRNA-dihydrouridine synthase; TIM barrel, oxidored 99.94
1z41_A338 YQJM, probable NADH-dependent flavin oxidoreductas 99.94
3gr7_A340 NADPH dehydrogenase; flavin, FMN, beta-alpha-barre 99.94
1vhn_A318 Putative flavin oxidoreducatase; structural genomi 99.93
3sr7_A365 Isopentenyl-diphosphate delta-isomerase; isopenten 99.93
2nli_A368 Lactate oxidase; flavoenzyme, FMN, D-lactate, oxid 99.93
3vkj_A368 Isopentenyl-diphosphate delta-isomerase; type 2 is 99.92
2nzl_A392 Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, G 99.92
3hgj_A349 Chromate reductase; TIM barrel, oxidoreductase; HE 99.92
1gox_A370 (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoredu 99.91
1kbi_A511 Cytochrome B2, L-LCR; flavocytochrome B2, electron 99.91
2gou_A365 Oxidoreductase, FMN-binding; OLD yeallow enzyme, f 99.91
1vyr_A364 Pentaerythritol tetranitrate reductase; oxidoreduc 99.91
3kru_A343 NADH:flavin oxidoreductase/NADH oxidase; homotetra 99.91
3sgz_A352 Hydroxyacid oxidase 2; flavoprotein, homology, INH 99.91
1vcf_A332 Isopentenyl-diphosphate delta-isomerase; TIM barre 99.91
2hsa_B402 12-oxophytodienoate reductase 3; alpha beta 8 barr 99.9
2r14_A377 Morphinone reductase; H-tunnelling, flavoprotein, 99.9
1o94_A 729 Tmadh, trimethylamine dehydrogenase; electron tran 99.9
3l5l_A363 Xenobiotic reductase A; TIM barrel, oxidoreductase 99.9
1icp_A376 OPR1, 12-oxophytodienoate reductase 1; beta-alpha- 99.89
1ps9_A 671 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel 99.89
3gka_A361 N-ethylmaleimide reductase; decode biostructures, 99.88
1p4c_A380 L(+)-mandelate dehydrogenase; TIM barrel, hydroxy 99.88
4ab4_A362 Xenobiotic reductase B; oxidoreductase, OLD yellow 99.87
3l5a_A419 NADH/flavin oxidoreductase/NADH oxidase; OLD yello 99.87
1ypf_A336 GMP reductase; GUAC, purines, pyrimidines, nucleos 99.87
3k30_A 690 Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi 99.85
3aty_A379 Tcoye, prostaglandin F2A synthase; alpha/beta barr 99.84
1eep_A404 Inosine 5'-monophosphate dehydrogenase; alpha-beta 99.84
2c6q_A351 GMP reductase 2; TIM barrel, metal-binding, NADP, 99.8
3tjl_A407 NADPH dehydrogenase; OLD yellow enzyme, flavin mon 99.78
2qr6_A393 IMP dehydrogenase/GMP reductase; NP_599840.1, G re 99.78
3r2g_A361 Inosine 5'-monophosphate dehydrogenase; structural 99.76
3khj_A361 Inosine-5-monophosphate dehydrogenase; enzyme-inhi 99.76
4a3u_A358 NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET 99.75
3bo9_A326 Putative nitroalkan dioxygenase; TM0800, structura 99.71
2z6i_A332 Trans-2-enoyl-ACP reductase II; fatty acid synthes 99.71
4fo4_A366 Inosine 5'-monophosphate dehydrogenase; structural 99.69
4gbu_A400 NADPH dehydrogenase 1; alpha/beta barrel, enenone 99.69
2gjl_A328 Hypothetical protein PA1024; 2-nitropropane dioxyg 99.63
3ffs_A400 Inosine-5-monophosphate dehydrogenase; beta-alpha 99.6
3bw2_A369 2-nitropropane dioxygenase; TIM barrel, oxidoreduc 99.57
4fxs_A496 Inosine-5'-monophosphate dehydrogenase; structural 99.55
1jcn_A514 Inosine monophosphate dehydrogenase I; IMPD, IMPDH 99.54
4avf_A490 Inosine-5'-monophosphate dehydrogenase; oxidoreduc 99.5
1mzh_A225 Deoxyribose-phosphate aldolase; alpha-beta barrel, 99.49
1xm3_A264 Thiazole biosynthesis protein THIG; structural gen 99.49
4af0_A556 Inosine-5'-monophosphate dehydrogenase; oxidoreduc 99.45
1ea0_A 1479 Glutamate synthase [NADPH] large chain; oxidoreduc 99.43
1vrd_A494 Inosine-5'-monophosphate dehydrogenase; TM1347, st 99.43
3usb_A511 Inosine-5'-monophosphate dehydrogenase; structural 99.41
1ofd_A 1520 Ferredoxin-dependent glutamate synthase 2; oxidore 99.41
1wv2_A265 Thiazole moeity, thiazole biosynthesis protein THI 99.37
1geq_A248 Tryptophan synthase alpha-subunit; hyperthermophIl 99.35
1qop_A268 Tryptophan synthase alpha chain; lyase, carbon-oxy 99.34
1h5y_A253 HISF; histidine biosynthesis, TIM-barrel; 2.0A {Py 99.34
2nv1_A305 Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-b 99.32
2uva_G 2060 Fatty acid synthase beta subunits; fungal, dehydra 99.31
2zbt_A297 Pyridoxal biosynthesis lyase PDXS; pyridoxine bios 99.3
3vnd_A267 TSA, tryptophan synthase alpha chain; psychrophili 99.3
3nav_A271 Tryptophan synthase alpha chain; alpha subunit, st 99.28
3q58_A229 N-acetylmannosamine-6-phosphate 2-epimerase; TIM b 99.28
3igs_A232 N-acetylmannosamine-6-phosphate 2-epimerase 2; ene 99.28
1rd5_A262 Tryptophan synthase alpha chain, chloroplast; hydr 99.28
2y88_A244 Phosphoribosyl isomerase A; aromatic amino acid bi 99.25
1zfj_A491 Inosine monophosphate dehydrogenase; IMPDH, CBS do 99.22
2ekc_A262 AQ_1548, tryptophan synthase alpha chain; structur 99.21
1me8_A503 Inosine-5'-monophosphate dehydrogenase; alpha beta 99.17
2w6r_A266 Imidazole glycerol phosphate synthase subunit HISF 99.15
1vzw_A244 Phosphoribosyl isomerase A; histidine biosynthesis 99.14
3tdn_A247 FLR symmetric alpha-beta TIM barrel; symmetric sup 99.14
1thf_D253 HISF protein; thermophIle, TIM-barrel, histidine b 99.13
1y0e_A223 Putative N-acetylmannosamine-6-phosphate 2-epimer; 99.13
1wa3_A205 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, 99.13
1ka9_F252 Imidazole glycerol phosphtate synthase; riken stru 99.1
4adt_A297 Pyridoxine biosynthetic enzyme PDX1 homologue, PU; 99.06
2htm_A268 Thiazole biosynthesis protein THIG; thiamin biosyn 99.06
3o07_A291 Pyridoxine biosynthesis protein SNZ1; (beta/alpha) 99.05
1ujp_A271 Tryptophan synthase alpha chain; riken structural 99.02
3f4w_A211 Putative hexulose 6 phosphate synthase; humps, mal 99.01
2cu0_A486 Inosine-5'-monophosphate dehydrogenase; structural 98.98
3ovp_A228 Ribulose-phosphate 3-epimerase; iron binding, isom 98.97
2agk_A260 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) me 98.97
1yxy_A234 Putative N-acetylmannosamine-6-phosphate 2-epimer; 98.97
1jvn_A555 Glutamine, bifunctional histidine biosynthesis pro 98.95
1qo2_A241 Molecule: N-((5-phosphoribosyl)-formimino)-5-amino 98.95
2yzr_A330 Pyridoxal biosynthesis lyase PDXS; redox protein, 98.93
2v82_A212 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; l 98.9
2uv8_G 2051 Fatty acid synthase subunit beta (FAS1); fatty aci 98.89
3inp_A246 D-ribulose-phosphate 3-epimerase; IDP02542, isomer 98.85
1tqj_A230 Ribulose-phosphate 3-epimerase; beta-alpha barrel 98.74
3vk5_A286 MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {S 98.72
3tha_A252 Tryptophan synthase alpha chain; structural genomi 98.72
1h1y_A228 D-ribulose-5-phosphate 3-epimerase; oxidative pent 98.72
1rpx_A230 Protein (ribulose-phosphate 3-epimerase); chloropl 98.7
2qjg_A273 Putative aldolase MJ0400; beta-alpha barrel, lyase 98.69
3vzx_A228 Heptaprenylglyceryl phosphate synthase; biosynthes 98.69
2yw3_A207 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deox 98.68
2tps_A227 Protein (thiamin phosphate synthase); thiamin bios 98.67
3ngj_A239 Deoxyribose-phosphate aldolase; lyase, structural 98.67
3qja_A272 IGPS, indole-3-glycerol phosphate synthase; struct 98.67
3ajx_A207 3-hexulose-6-phosphate synthase; HPS, OMPDC supraf 98.64
3tsm_A272 IGPS, indole-3-glycerol phosphate synthase; struct 98.64
1yad_A221 Regulatory protein TENI; TIM barrel, transcription 98.62
1xg4_A295 Probable methylisocitrate lyase; 2-methylisocitrat 98.61
3jr2_A218 Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulon 98.59
3tdn_A247 FLR symmetric alpha-beta TIM barrel; symmetric sup 98.58
2fli_A220 Ribulose-phosphate 3-epimerase; (beta/alpha)8-barr 98.58
2f6u_A234 GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate sy 98.57
3zen_D 3089 Fatty acid synthase; transferase, mycolic acid bio 98.56
1viz_A240 PCRB protein homolog; structural genomics, unknown 98.55
1tqx_A227 D-ribulose-5-phosphate 3-epimerase, putative; stru 98.55
3oa3_A288 Aldolase; structural genomics, seattle structural 98.55
2p10_A286 MLL9387 protein; putative phosphonopyruvate hydrol 98.49
3r12_A260 Deoxyribose-phosphate aldolase; TIM beta/alpha-bar 98.48
3ctl_A231 D-allulose-6-phosphate 3-epimerase; D-glucitol 6-p 98.47
1xi3_A215 Thiamine phosphate pyrophosphorylase; structural g 98.47
3w01_A235 Heptaprenylglyceryl phosphate synthase; biosynthes 98.45
3o63_A243 Probable thiamine-phosphate pyrophosphorylase; thi 98.42
1q6o_A216 Humps, 3-keto-L-gulonate 6-phosphate decarboxylase 98.4
1pii_A 452 N-(5'phosphoribosyl)anthranilate isomerase; bifunc 98.38
1thf_D253 HISF protein; thermophIle, TIM-barrel, histidine b 98.37
4e38_A232 Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho 98.36
3cu2_A237 Ribulose-5-phosphate 3-epimerase; YP_718263.1, rib 98.35
1ub3_A220 Aldolase protein; schiff base, deoxyribose phospha 98.31
2pgw_A384 Muconate cycloisomerase; enolase superfamily, octa 98.31
1w8s_A263 FBP aldolase, fructose-bisphosphate aldolase class 98.29
1ka9_F252 Imidazole glycerol phosphtate synthase; riken stru 98.29
3ndo_A231 Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid 98.28
3ih1_A305 Methylisocitrate lyase; alpha-beta structure, TIM- 98.26
1i4n_A251 Indole-3-glycerol phosphate synthase; thermostable 98.25
4a29_A258 Engineered retro-aldol enzyme RA95.0; de novo prot 98.22
1h5y_A253 HISF; histidine biosynthesis, TIM-barrel; 2.0A {Py 98.2
1vc4_A254 Indole-3-glycerol phosphate synthase; lyase, trypt 98.18
3exr_A221 RMPD (hexulose-6-phosphate synthase); beta barrel, 98.17
1qo2_A241 Molecule: N-((5-phosphoribosyl)-formimino)-5-amino 98.14
2czd_A208 Orotidine 5'-phosphate decarboxylase; pyrimidine b 98.12
3eoo_A298 Methylisocitrate lyase; seattle structural genomic 98.12
2nql_A388 AGR_PAT_674P, isomerase/lactonizing enzyme; enolas 98.11
2y88_A244 Phosphoribosyl isomerase A; aromatic amino acid bi 98.11
3cwo_X237 Beta/alpha-barrel protein based on 1THF and 1TMY; 98.09
1vzw_A244 Phosphoribosyl isomerase A; histidine biosynthesis 98.09
1mdl_A359 Mandelate racemase; isomerase, mandelate pathway, 98.06
2hzg_A401 Mandelate racemase/muconate lactonizing enzyme/EN 98.06
1zlp_A318 PSR132, petal death protein; TIM-barrel, helix swa 98.05
2ovl_A371 Putative racemase; structural genomics, PSI-2, pro 98.05
1vhc_A224 Putative KHG/KDPG aldolase; structural genomics, u 98.03
3lab_A217 Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) 98.03
3lab_A217 Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) 98.0
4gj1_A243 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) me 98.0
1rvk_A382 Isomerase/lactonizing enzyme; enolase superfamily, 97.95
1s2w_A295 Phosphoenolpyruvate phosphomutase; phosphonopyruva 97.94
2rdx_A379 Mandelate racemase/muconate lactonizing enzyme, P; 97.93
1jvn_A555 Glutamine, bifunctional histidine biosynthesis pro 97.93
2hjp_A290 Phosphonopyruvate hydrolase; phosporus-Ca cleavage 97.93
4e38_A232 Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho 97.92
2ze3_A275 DFA0005; organic waste LEFT-OVER decomposition, al 97.89
1vcv_A226 Probable deoxyribose-phosphate aldolase; DERA, hyp 97.89
1mxs_A225 KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate a 97.86
1wbh_A214 KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} 97.84
4gj1_A243 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) me 97.82
2a4a_A281 Deoxyribose-phosphate aldolase; lyase, TIM beta/al 97.8
1nu5_A370 Chloromuconate cycloisomerase; enzyme, dehalogenat 97.79
1n7k_A234 Deoxyribose-phosphate aldolase; A.pernix, tetramer 97.78
1p1x_A260 Deoxyribose-phosphate aldolase; alpha-beta barrel, 97.78
3stp_A412 Galactonate dehydratase, putative; PSI biology, st 97.78
2w6r_A266 Imidazole glycerol phosphate synthase subunit HISF 97.76
3ozy_A389 Putative mandelate racemase; beta-alpha barrel, en 97.76
2poz_A392 Putative dehydratase; octamer, structural genomics 97.75
2gl5_A410 Putative dehydratase protein; structural genomics, 97.75
2qdd_A378 Mandelate racemase/muconate lactonizing enzyme; en 97.74
2qr6_A393 IMP dehydrogenase/GMP reductase; NP_599840.1, G re 97.72
2qgy_A391 Enolase from the environmental genome shotgun sequ 97.7
3eez_A378 Putative mandelate racemase/muconate lactonizing e 97.7
1vhc_A224 Putative KHG/KDPG aldolase; structural genomics, u 97.69
2p8b_A369 Mandelate racemase/muconate lactonizing enzyme fam 97.68
3lye_A307 Oxaloacetate acetyl hydrolase; (alpha/beta)8 barre 97.67
3fa4_A302 2,3-dimethylmalate lyase; alpha/beta barrel, helix 97.67
2og9_A393 Mandelate racemase/muconate lactonizing enzyme; NY 97.65
3ceu_A210 Thiamine phosphate pyrophosphorylase; TIM barrel-l 97.65
2ps2_A371 Putative mandelate racemase/muconate lactonizing e 97.64
2oz8_A389 MLL7089 protein; structural genomics, unknown func 97.64
1wbh_A214 KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} 97.63
3rcy_A433 Mandelate racemase/muconate lactonizing enzyme-LI 97.62
2qq6_A410 Mandelate racemase/muconate lactonizing enzyme- li 97.6
4eiv_A297 Deoxyribose-phosphate aldolase; chemotherapy, brai 97.59
1tkk_A366 Similar to chloromuconate cycloisomerase; epimeras 97.58
3iv3_A332 Tagatose 1,6-diphosphate aldolase 2; TIM barrel, p 97.58
3glc_A295 Aldolase LSRF; TIM barrel, lyase, schiff base; HET 97.57
4dwd_A393 Mandelate racemase/muconate lactonizing enzyme, C 97.57
2h6r_A219 Triosephosphate isomerase; beta-alpha barrel; 2.30 97.57
2pp0_A398 L-talarate/galactarate dehydratase; enolase superf 97.56
2o56_A407 Putative mandelate racemase; dehydratase, structur 97.55
3q58_A229 N-acetylmannosamine-6-phosphate 2-epimerase; TIM b 97.54
3kts_A192 Glycerol uptake operon antiterminator regulatory; 97.54
2ox4_A403 Putative mandelate racemase; enolase, dehydratase, 97.52
3b8i_A287 PA4872 oxaloacetate decarboxylase; alpha/beta barr 97.5
3sjn_A374 Mandelate racemase/muconate lactonizing protein; e 97.48
2qde_A397 Mandelate racemase/muconate lactonizing enzyme FA 97.48
3m47_A228 Orotidine 5'-phosphate decarboxylase; orotidine 5' 97.47
1tzz_A392 Hypothetical protein L1841; structural genomics, m 97.47
3rr1_A405 GALD, putative D-galactonate dehydratase; enolase, 97.46
3igs_A232 N-acetylmannosamine-6-phosphate 2-epimerase 2; ene 97.42
1mxs_A225 KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate a 97.4
2vc6_A292 MOSA, dihydrodipicolinate synthase; DHDPS, TIM bar 97.39
3ve9_A215 Orotidine-5'-phosphate decarboxylase; TIM barrel f 97.39
3nl6_A 540 Thiamine biosynthetic bifunctional enzyme; thiamin 97.37
1o66_A275 3-methyl-2-oxobutanoate hydroxymethyltransferase; 97.36
3i4k_A383 Muconate lactonizing enzyme; structural genomics, 97.35
1yxy_A234 Putative N-acetylmannosamine-6-phosphate 2-epimer; 97.34
2zad_A345 Muconate cycloisomerase; muconate lactonizing enzy 97.34
4dbe_A222 Orotidine 5'-phosphate decarboxylase; TIM barrel, 97.33
2gdq_A382 YITF; mandelate racemase/muconate lactonizing enzy 97.33
1xky_A301 Dihydrodipicolinate synthase; TIM barrel, , lysine 97.31
3na8_A315 Putative dihydrodipicolinate synthetase; lyase; HE 97.3
3sbf_A401 Mandelate racemase / muconate lactonizing enzyme; 97.29
3bjs_A428 Mandelate racemase/muconate lactonizing enzyme; en 97.28
2ehh_A294 DHDPS, dihydrodipicolinate synthase; structural ge 97.27
3eb2_A300 Putative dihydrodipicolinate synthetase; lysine bi 97.26
3m5v_A301 DHDPS, dihydrodipicolinate synthase; TIM barrel, c 97.26
1eix_A245 Orotidine 5'-monophosphate decarboxylase; alpha-be 97.25
3r4e_A418 Mandelate racemase/muconate lactonizing enzyme; en 97.25
1to3_A304 Putative aldolase YIHT; beta-alpha barrel, structu 97.22
4e5t_A404 Mandelate racemase / muconate lactonizing enzyme, 97.22
3tak_A291 DHDPS, dihydrodipicolinate synthase; TIM barrel, l 97.22
4e4u_A412 Mandalate racemase/muconate lactonizing enzyme; ma 97.2
3qze_A314 DHDPS, dihydrodipicolinate synthase; alpha beta ba 97.2
1y0e_A223 Putative N-acetylmannosamine-6-phosphate 2-epimer; 97.2
3ru6_A303 Orotidine 5'-phosphate decarboxylase; structural g 97.19
3flu_A297 DHDPS, dihydrodipicolinate synthase; TIM barrel, b 97.18
2qiw_A255 PEP phosphonomutase; structural genomics, joint ce 97.17
3vav_A275 3-methyl-2-oxobutanoate hydroxymethyltransferase; 97.17
3fs2_A298 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, 97.15
1m3u_A264 3-methyl-2-oxobutanoate hydroxymethyltransferase; 97.14
3tji_A422 Mandelate racemase/muconate lactonizing enzyme, N 97.14
2hxt_A441 L-fuconate dehydratase; enolase superfamily, D-ery 97.13
3hgj_A349 Chromate reductase; TIM barrel, oxidoreductase; HE 97.11
2rfg_A297 Dihydrodipicolinate synthase; beta barrel, amino-a 97.07
2agk_A260 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) me 97.07
3ro6_B356 Putative chloromuconate cycloisomerase; TIM barrel 97.07
2r8w_A332 AGR_C_1641P; APC7498, dihydrodipicolinate synthase 97.07
3a5f_A291 Dihydrodipicolinate synthase; TIM barrel, enzyme, 97.06
3dg3_A367 Muconate cycloisomerase; muconate lactonizing enzy 97.06
4adt_A297 Pyridoxine biosynthetic enzyme PDX1 homologue, PU; 97.05
2wkj_A303 N-acetylneuraminate lyase; directed evolution, sia 97.05
3iwp_A287 Copper homeostasis protein CUTC homolog; conserved 97.04
3toy_A383 Mandelate racemase/muconate lactonizing enzyme FA 97.04
3l21_A304 DHDPS, dihydrodipicolinate synthase; DAPA, dimer, 97.04
3qfe_A318 Putative dihydrodipicolinate synthase family PROT; 97.03
1o5k_A306 DHDPS, dihydrodipicolinate synthase; TM1521, struc 97.03
2v9d_A343 YAGE; dihydrodipicolinic acid synthase, N-acetyl n 97.01
2yyu_A246 Orotidine 5'-phosphate decarboxylase; TIM barrel, 97.0
1f6k_A293 N-acetylneuraminate lyase; beta barrel; 1.60A {Hae 96.99
1chr_A370 Chloromuconate cycloisomerase; 3.00A {Ralstonia eu 96.99
3jva_A354 Dipeptide epimerase; enolase superfamily, isomeras 96.98
3si9_A315 DHDPS, dihydrodipicolinate synthase; structural ge 96.98
2wqp_A349 Polysialic acid capsule biosynthesis protein SIAC; 96.98
3khj_A 361 Inosine-5-monophosphate dehydrogenase; enzyme-inhi 96.97
3gr7_A340 NADPH dehydrogenase; flavin, FMN, beta-alpha-barre 96.96
3tfx_A259 Orotidine 5'-phosphate decarboxylase; PSI-biology, 96.96
1z41_A338 YQJM, probable NADH-dependent flavin oxidoreductas 96.96
1sjd_A368 N-acylamino acid racemase; lyase, isomerase; HET: 96.96
3daq_A292 DHDPS, dihydrodipicolinate synthase; lysine biosyn 96.95
4avf_A 490 Inosine-5'-monophosphate dehydrogenase; oxidoreduc 96.95
3ugv_A390 Enolase; enzyme function initiative, EFI, lyase; 2 96.95
3cpr_A304 Dihydrodipicolinate synthetase; (beta/alpha)8-barr 96.94
3nvt_A385 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; 96.94
3tj4_A372 Mandelate racemase; enolase, dehydratase, enzyme f 96.93
2b7n_A273 Probable nicotinate-nucleotide pyrophosphorylase; 96.93
1vli_A385 Spore coat polysaccharide biosynthesis protein SP; 96.92
2yxg_A289 DHDPS, dihydrodipicolinate synthase; MJ0244, TIM b 96.92
3v3w_A424 Starvation sensing protein RSPA; enolase, enzyme f 96.91
2bdq_A224 Copper homeostasis protein CUTC; alpha beta protei 96.91
1vs1_A276 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha 96.9
1w0m_A226 TIM, triosephosphate isomerase; glycolysis, glucon 96.9
3ddm_A392 Putative mandelate racemase/muconate lactonizing e 96.86
1zco_A262 2-dehydro-3-deoxyphosphoheptonate aldolase; arabin 96.86
3d0c_A314 Dihydrodipicolinate synthase; lysine biosynthesis, 96.85
3my9_A377 Muconate cycloisomerase; structural genomics, PSI- 96.85
3l5l_A363 Xenobiotic reductase A; TIM barrel, oxidoreductase 96.85
2ojp_A292 DHDPS, dihydrodipicolinate synthase; dimer, lysine 96.84
3ffs_A400 Inosine-5-monophosphate dehydrogenase; beta-alpha 96.84
1vr6_A350 Phospho-2-dehydro-3-deoxyheptonate aldolase; TM034 96.83
3h5d_A311 DHDPS, dihydrodipicolinate synthase; lysine biosyn 96.83
3vcn_A425 Mannonate dehydratase; enolase, magnesium binding 96.83
4fxs_A496 Inosine-5'-monophosphate dehydrogenase; structural 96.82
3mqt_A394 Mandelate racemase/muconate lactonizing protein; P 96.82
3s5o_A307 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; 96.79
3t6c_A440 RSPA, putative MAND family dehydratase; enolase, m 96.74
3tml_A288 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, 96.74
3ldv_A255 Orotidine 5'-phosphate decarboxylase; structural g 96.74
3mkc_A394 Racemase; metabolic process, PSI2, NYSGXRC, struct 96.72
3b4u_A294 Dihydrodipicolinate synthase; structural genomics, 96.7
3tr2_A239 Orotidine 5'-phosphate decarboxylase; purines, pyr 96.7
3tcs_A388 Racemase, putative; PSI-biology, nysgrc, structura 96.7
3ih1_A305 Methylisocitrate lyase; alpha-beta structure, TIM- 96.7
1oy0_A281 Ketopantoate hydroxymethyltransferase; domain swap 96.69
1h1y_A228 D-ribulose-5-phosphate 3-epimerase; oxidative pent 96.68
1hg3_A225 Triosephosphate isomerase; thermostability, tetram 96.67
3q45_A368 Mandelate racemase/muconate lactonizing enzyme FA 96.67
1dbt_A239 Orotidine 5'-phosphate decarboxylase; UMP, TIM bar 96.66
3fv9_G386 Mandelate racemase/muconate lactonizing enzyme; st 96.63
3gd6_A391 Muconate cycloisomerase; structural genomics, NYSG 96.63
3go2_A409 Putative L-alanine-DL-glutamate epimerase; structu 96.61
3kru_A343 NADH:flavin oxidoreductase/NADH oxidase; homotetra 96.6
4fo4_A 366 Inosine 5'-monophosphate dehydrogenase; structural 96.6
3dz1_A313 Dihydrodipicolinate synthase; lysine biosynthesis, 96.6
3jr2_A218 Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulon 96.6
1qap_A296 Quinolinic acid phosphoribosyltransferase; glycosy 96.54
3eoo_A298 Methylisocitrate lyase; seattle structural genomic 96.53
1o60_A292 2-dehydro-3-deoxyphosphooctonate aldolase; structu 96.52
1vc4_A254 Indole-3-glycerol phosphate synthase; lyase, trypt 96.51
3r0u_A379 Enzyme of enolase superfamily; structural genomics 96.51
1jub_A311 Dihydroorotate dehydrogenase A; homodimer, alpha-b 96.5
3i6e_A385 Muconate cycloisomerase I; structural genomics, NY 96.5
2jbm_A299 Nicotinate-nucleotide pyrophosphorylase; NAD, enzy 96.48
3sz8_A285 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgci 96.42
3f4w_A211 Putative hexulose 6 phosphate synthase; humps, mal 96.4
3usb_A511 Inosine-5'-monophosphate dehydrogenase; structural 96.4
3mwc_A400 Mandelate racemase/muconate lactonizing protein; e 96.39
3e96_A316 Dihydrodipicolinate synthase; structural genomics, 96.37
2hmc_A344 AGR_L_411P, dihydrodipicolinate synthase; alpha-be 96.33
4e4f_A426 Mannonate dehydratase; magnesium binding, enzyme f 96.33
2r91_A286 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM 96.32
1twd_A256 Copper homeostasis protein CUTC; TIM-like protein, 96.31
1r0m_A375 N-acylamino acid racemase; isomerase; 1.30A {Deino 96.31
2zc8_A369 N-acylamino acid racemase; octamer, TIM beta/alpha 96.28
1w3i_A293 EDA, 2-keto-3-deoxy gluconate aldolase; archaeal m 96.25
3zwt_A367 Dihydroorotate dehydrogenase (quinone), mitochond; 96.24
1f76_A336 Dihydroorotate dehydrogenase; monomer, alpha-beta- 96.2
3qja_A272 IGPS, indole-3-glycerol phosphate synthase; struct 96.17
1xg4_A295 Probable methylisocitrate lyase; 2-methylisocitrat 96.17
1i4n_A251 Indole-3-glycerol phosphate synthase; thermostable 96.17
1x1o_A286 Nicotinate-nucleotide pyrophosphorylase; transfera 96.14
1vkf_A188 Glycerol uptake operon antiterminator-related Pro; 96.12
3ajx_A207 3-hexulose-6-phosphate synthase; HPS, OMPDC supraf 96.11
2r14_A377 Morphinone reductase; H-tunnelling, flavoprotein, 96.1
3fkr_A309 L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL f 96.1
3tsm_A272 IGPS, indole-3-glycerol phosphate synthase; struct 96.05
3dgb_A382 Muconate cycloisomerase; muconate lactonizing enzy 96.02
2p10_A286 MLL9387 protein; putative phosphonopyruvate hydrol 96.01
4ab4_A362 Xenobiotic reductase B; oxidoreductase, OLD yellow 95.98
3dip_A410 Enolase; structural genomics, isomerase, PSI-2, pr 95.98
2e6f_A314 Dihydroorotate dehydrogenase; chagas disease, pyri 95.95
4af0_A556 Inosine-5'-monophosphate dehydrogenase; oxidoreduc 95.92
3bo9_A326 Putative nitroalkan dioxygenase; TM0800, structura 95.91
1zlp_A318 PSR132, petal death protein; TIM-barrel, helix swa 95.91
3r2g_A 361 Inosine 5'-monophosphate dehydrogenase; structural 95.88
1vqt_A213 Orotidine 5'-phosphate decarboxylase; TM0332, stru 95.87
3ctl_A231 D-allulose-6-phosphate 3-epimerase; D-glucitol 6-p 95.87
1jcn_A514 Inosine monophosphate dehydrogenase I; IMPD, IMPDH 95.86
1vyr_A364 Pentaerythritol tetranitrate reductase; oxidoreduc 95.84
3gka_A361 N-ethylmaleimide reductase; decode biostructures, 95.77
3e96_A316 Dihydrodipicolinate synthase; structural genomics, 95.76
2wkj_A303 N-acetylneuraminate lyase; directed evolution, sia 95.72
3p3b_A392 Mandelate racemase/muconate lactonizing protein; e 95.69
3fcp_A381 L-Ala-D/L-Glu epimerase, A muconate lactonizing en 95.69
3qze_A314 DHDPS, dihydrodipicolinate synthase; alpha beta ba 95.67
2gou_A365 Oxidoreductase, FMN-binding; OLD yeallow enzyme, f 95.67
3d0c_A314 Dihydrodipicolinate synthase; lysine biosynthesis, 95.66
4a29_A258 Engineered retro-aldol enzyme RA95.0; de novo prot 95.64
3i65_A415 Dihydroorotate dehydrogenase homolog, mitochondria 95.64
2r8w_A332 AGR_C_1641P; APC7498, dihydrodipicolinate synthase 95.63
3b0p_A350 TRNA-dihydrouridine synthase; TIM barrel, oxidored 95.63
1xky_A301 Dihydrodipicolinate synthase; TIM barrel, , lysine 95.6
3tak_A291 DHDPS, dihydrodipicolinate synthase; TIM barrel, l 95.59
4hnl_A421 Mandelate racemase/muconate lactonizing enzyme; de 95.58
1ypf_A336 GMP reductase; GUAC, purines, pyrimidines, nucleos 95.58
2vc6_A292 MOSA, dihydrodipicolinate synthase; DHDPS, TIM bar 95.55
3l21_A304 DHDPS, dihydrodipicolinate synthase; DAPA, dimer, 95.52
1f6k_A293 N-acetylneuraminate lyase; beta barrel; 1.60A {Hae 95.49
3o1n_A276 3-dehydroquinate dehydratase; structural genomics, 95.49
1o5k_A306 DHDPS, dihydrodipicolinate synthase; TM1521, struc 95.48
3g8r_A350 Probable spore coat polysaccharide biosynthesis P; 95.48
1ps9_A 671 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel 95.48
1zfj_A 491 Inosine monophosphate dehydrogenase; IMPDH, CBS do 95.43
1p0k_A349 Isopentenyl-diphosphate delta-isomerase; terpene b 95.42
3c2e_A294 Nicotinate-nucleotide pyrophosphorylase; qprtase, 95.39
3l5a_A419 NADH/flavin oxidoreductase/NADH oxidase; OLD yello 95.39
3si9_A315 DHDPS, dihydrodipicolinate synthase; structural ge 95.39
2yxg_A289 DHDPS, dihydrodipicolinate synthase; MJ0244, TIM b 95.38
3daq_A292 DHDPS, dihydrodipicolinate synthase; lysine biosyn 95.38
3k30_A 690 Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP bi 95.37
3flu_A297 DHDPS, dihydrodipicolinate synthase; TIM barrel, b 95.36
3paj_A320 Nicotinate-nucleotide pyrophosphorylase, carboxyl; 95.36
3na8_A315 Putative dihydrodipicolinate synthetase; lyase; HE 95.33
2hjp_A290 Phosphonopyruvate hydrolase; phosporus-Ca cleavage 95.33
3tqv_A287 Nicotinate-nucleotide pyrophosphorylase; glycosylt 95.31
2nwr_A267 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KD 95.27
2ehh_A294 DHDPS, dihydrodipicolinate synthase; structural ge 95.27
3cpr_A304 Dihydrodipicolinate synthetase; (beta/alpha)8-barr 95.26
2v9d_A343 YAGE; dihydrodipicolinic acid synthase, N-acetyl n 95.25
3eol_A433 Isocitrate lyase; seattle structural center for in 95.22
4e8g_A391 Enolase, mandelate racemase/muconate lactonizing e 95.21
1v5x_A203 PRA isomerase, phosphoribosylanthranilate isomeras 95.2
1ep3_A311 Dihydroorotate dehydrogenase B (PYRD subunit); het 95.19
1mzh_A225 Deoxyribose-phosphate aldolase; alpha-beta barrel, 95.19
2z6i_A 332 Trans-2-enoyl-ACP reductase II; fatty acid synthes 95.18
3b8i_A287 PA4872 oxaloacetate decarboxylase; alpha/beta barr 95.17
2hsa_B402 12-oxophytodienoate reductase 3; alpha beta 8 barr 95.16
3a5f_A291 Dihydrodipicolinate synthase; TIM barrel, enzyme, 95.14
3s5o_A307 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; 95.14
3ik4_A365 Mandelate racemase/muconate lactonizing protein; s 95.14
2ojp_A292 DHDPS, dihydrodipicolinate synthase; dimer, lysine 95.13
1vhn_A318 Putative flavin oxidoreducatase; structural genomi 95.11
2qkf_A280 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; 95.08
2nuw_A288 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho a 95.07
1o4u_A285 Type II quinolic acid phosphoribosyltransferase; s 95.07
2pcq_A283 Putative dihydrodipicolinate synthase; lyase, lysi 95.07
3m5v_A301 DHDPS, dihydrodipicolinate synthase; TIM barrel, c 95.06
2rfg_A297 Dihydrodipicolinate synthase; beta barrel, amino-a 95.06
3fkr_A309 L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL f 95.05
4aaj_A228 N-(5'-phosphoribosyl)anthranilate isomerase; alpha 95.03
1icp_A376 OPR1, 12-oxophytodienoate reductase 1; beta-alpha- 95.03
1s2w_A295 Phosphoenolpyruvate phosphomutase; phosphonopyruva 95.01
4dye_A398 Isomerase; enolase family protein, EFI, enzym func 94.99
3dz1_A313 Dihydrodipicolinate synthase; lysine biosynthesis, 94.92
3fa4_A302 2,3-dimethylmalate lyase; alpha/beta barrel, helix 94.9
3qfe_A 318 Putative dihydrodipicolinate synthase family PROT; 94.89
3lg3_A435 Isocitrate lyase; conserved, CD, proteomics eviden 94.76
3aty_A379 Tcoye, prostaglandin F2A synthase; alpha/beta barr 94.76
4dxk_A400 Mandelate racemase / muconate lactonizing enzyme p 94.76
1qpo_A284 Quinolinate acid phosphoribosyl transferase; type 94.73
3lye_A307 Oxaloacetate acetyl hydrolase; (alpha/beta)8 barre 94.73
1tv5_A443 Dhodehase, dihydroorotate dehydrogenase homolog, m 94.73
1nvm_A345 HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered 94.72
4h3d_A258 3-dehydroquinate dehydratase; structural genomics, 94.68
2gjl_A328 Hypothetical protein PA1024; 2-nitropropane dioxyg 94.68
3q94_A288 Fructose-bisphosphate aldolase, class II; structur 94.61
3i4e_A439 Isocitrate lyase; structural genomics, seattle str 94.61
1pii_A 452 N-(5'phosphoribosyl)anthranilate isomerase; bifunc 94.59
3gnn_A298 Nicotinate-nucleotide pyrophosphorylase; decode bi 94.58
3l0g_A300 Nicotinate-nucleotide pyrophosphorylase; ssgcid, N 94.47
4ef8_A354 Dihydroorotate dehydrogenase; phenyl isothiocyanat 94.44
2ffc_A353 Orotidine 5-monophosphate decarboxylase; PV-PF10_0 94.43
3b4u_A294 Dihydrodipicolinate synthase; structural genomics, 94.4
3eb2_A300 Putative dihydrodipicolinate synthetase; lysine bi 94.32
2nuw_A288 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho a 94.3
3gk0_A278 PNP synthase, pyridoxine 5'-phosphate synthase; de 94.28
1m5w_A243 Pyridoxal phosphate biosynthetic protein PDXJ; TIM 94.24
1aj0_A282 DHPS, dihydropteroate synthase; antibiotic, resist 94.15
2ze3_A275 DFA0005; organic waste LEFT-OVER decomposition, al 94.11
2tps_A227 Protein (thiamin phosphate synthase); thiamin bios 94.09
3r12_A260 Deoxyribose-phosphate aldolase; TIM beta/alpha-bar 94.02
4a35_A441 Mitochondrial enolase superfamily member 1; isomer 94.01
3ngj_A239 Deoxyribose-phosphate aldolase; lyase, structural 94.0
2yci_X271 5-methyltetrahydrofolate corrinoid/iron sulfur PR 93.99
4dpp_A360 DHDPS 2, dihydrodipicolinate synthase 2, chloropla 93.96
3sr7_A365 Isopentenyl-diphosphate delta-isomerase; isopenten 93.93
2r91_A286 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM 93.91
3nav_A271 Tryptophan synthase alpha chain; alpha subunit, st 93.87
1f8m_A429 Isocitrate lyase, ICL; alpha-beta barrel, helix-sw 93.87
3eeg_A325 2-isopropylmalate synthase; 11106D, beta barrel, P 93.85
1ydn_A295 Hydroxymethylglutaryl-COA lyase; TIM-barrel protei 93.84
3h5d_A311 DHDPS, dihydrodipicolinate synthase; lysine biosyn 93.82
1gox_A370 (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoredu 93.72
4dpp_A 360 DHDPS 2, dihydrodipicolinate synthase 2, chloropla 93.69
1sfl_A238 3-dehydroquinate dehydratase; 3-dehydroquinase, en 93.69
1ydn_A295 Hydroxymethylglutaryl-COA lyase; TIM-barrel protei 93.67
2ftp_A302 Hydroxymethylglutaryl-COA lyase; structural genomi 93.67
2ekc_A262 AQ_1548, tryptophan synthase alpha chain; structur 93.57
1w3i_A293 EDA, 2-keto-3-deoxy gluconate aldolase; archaeal m 93.55
3kts_A192 Glycerol uptake operon antiterminator regulatory; 93.55
1o94_A 729 Tmadh, trimethylamine dehydrogenase; electron tran 93.52
1gvf_A286 Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; 93.51
1f6y_A262 5-methyltetrahydrofolate corrinoid/iron sulfur PR 93.46
4djd_D323 C/Fe-SP, corrinoid/iron-sulfur protein small subun 93.3
2cw6_A298 Hydroxymethylglutaryl-COA lyase, mitochondrial; HM 93.29
3vav_A275 3-methyl-2-oxobutanoate hydroxymethyltransferase; 93.26
2ftp_A302 Hydroxymethylglutaryl-COA lyase; structural genomi 93.18
1vrd_A 494 Inosine-5'-monophosphate dehydrogenase; TM1347, st 93.15
3o1n_A276 3-dehydroquinate dehydratase; structural genomics, 93.13
4h1z_A412 Enolase Q92ZS5; dehydratase, magnesium binding sit 93.12
2nli_A368 Lactate oxidase; flavoenzyme, FMN, D-lactate, oxid 93.1
3oix_A345 Putative dihydroorotate dehydrogenase; dihydrooro 93.0
2hmc_A344 AGR_L_411P, dihydrodipicolinate synthase; alpha-be 92.91
1nvm_A345 HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered 92.85
1vcf_A332 Isopentenyl-diphosphate delta-isomerase; TIM barre 92.79
1eep_A404 Inosine 5'-monophosphate dehydrogenase; alpha-beta 92.78
2v5j_A287 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; l 92.76
3ble_A337 Citramalate synthase from leptospira interrogans; 92.76
1p4c_A380 L(+)-mandelate dehydrogenase; TIM barrel, hydroxy 92.75
1xi3_A215 Thiamine phosphate pyrophosphorylase; structural g 92.73
2qiw_A255 PEP phosphonomutase; structural genomics, joint ce 92.69
3oa3_A288 Aldolase; structural genomics, seattle structural 92.61
2nx9_A 464 Oxaloacetate decarboxylase 2, subunit alpha; carbo 92.6
1eye_A280 DHPS 1, dihydropteroate synthase I; alpha-beta bar 92.58
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A* Back     alignment and structure
Probab=100.00  E-value=4.6e-59  Score=464.22  Aligned_cols=316  Identities=22%  Similarity=0.250  Sum_probs=271.7

Q ss_pred             cccCCCCCCCcceEeCCeecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCc
Q 014581           37 ASDSASAEPDLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAK  116 (422)
Q Consensus        37 ~~~~~~~~~dL~~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~  116 (422)
                      ..++..++++|+++|+|++|+|||++|||+++++.+.++.+.++|||+||+||+|.++ |.+|+.||+++++.     +.
T Consensus        27 ~~~~~~~~~~L~~~~~Gl~~~NPv~lAAG~~~~~~e~~~~l~~~G~G~v~~ktvt~~p-q~GNp~PR~~~~~~-----~~  100 (354)
T 4ef8_A           27 GQQMGRGSMSLQVNLLNNTFANPFMNAAGVMCTTTEELVAMTESASGSLVSKSCTPAL-REGNPTPRYQALPL-----GS  100 (354)
T ss_dssp             -------CCCCCEEETTEEESSSEEECTTSSCSSHHHHHHHHHSSCSCEEEEEECSSC-BCCSCSCCEEEETT-----EE
T ss_pred             hhhcCCCCCCcceEECCEECCCCCEeccCCCCCCHHHHHHHHHcCCCeEEeCcccCcc-cCCCCCCcEEecch-----hh
Confidence            3445678899999999999999999999999999999999999999999999999987 79999999999875     34


Q ss_pred             ccccccccccccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHH---HhCCCEEEEccCCCCCCCcc
Q 014581          117 GQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVE---ETGIDAIEVNFSCPHGMPER  193 (422)
Q Consensus       117 ~~~~Gl~n~~~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~---~aGaD~iElN~scP~~~~~~  193 (422)
                      .|++||+|.+      ++.|+++++++++ +++.|+++||. +.++++|.+++++++   ++|+|+||||+||||+..  
T Consensus       101 iN~~G~~n~G------~~~~~~~l~~~~~-~~~~pvivsI~-G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~g--  170 (354)
T 4ef8_A          101 INSMGLPNNG------FDFYLAYAAEQHD-YGKKPLFLSMS-GLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPG--  170 (354)
T ss_dssp             EECCCCCBCC------HHHHHHHHHHTCC-TTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTT--
T ss_pred             hccCCCCCcC------HHHHHHHHHHHhh-cCCCcEEEEec-cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCC--
Confidence            8999999988      8999999987763 45789999996 688999999999998   568999999999999742  


Q ss_pred             ccccccccChhHHHHHHHHHhhccCccEEEEECCCCCC--hHHHHHHHHHcC-CCEEEEecCCcccccccccCCCCCCCC
Q 014581          194 KMGAAVGQDCRLLEEVCGWINAKATVPVWAKMTPNITD--ITEPARVALRSG-SEGVSAINTIMSVMGIDLKTLRPEPCV  270 (422)
Q Consensus       194 ~~G~~l~~~~~~v~~iv~~vr~~~~iPv~vKl~~~~~~--~~~~a~~l~~aG-adgi~v~n~~~~~~~id~e~~~p~~~~  270 (422)
                        |.+++++++.+.++++++++.+++||+||++|+++.  +.++++.+.++| +|+|+++||+...+.||+++.++... 
T Consensus       171 --g~~l~~~~e~~~~il~av~~~~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~-  247 (354)
T 4ef8_A          171 --KPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIK-  247 (354)
T ss_dssp             --SCCGGGSHHHHHHHHHHHHHHCCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCS-
T ss_pred             --chhhccCHHHHHHHHHHHHHhhCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccc-
Confidence              557778999999999999999999999999999742  344555666898 99999999985456778776655321 


Q ss_pred             CCCCccCCCCCCCcchhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHH
Q 014581          271 EGYSTPGGYSCKAVHPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRL  350 (422)
Q Consensus       271 ~~~~~~gG~sG~~i~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i  350 (422)
                       .....||+||++++|.++++|+++++...      ++|||++|||.+++|+.+++++|||+||+||+++++||+++++|
T Consensus       248 -~~~~~gGlSG~~i~p~a~~~i~~v~~~~~------~ipII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~GP~~~~~i  320 (354)
T 4ef8_A          248 -PKQGFGGLGGRYVLPTALANINAFYRRCP------GKLIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERL  320 (354)
T ss_dssp             -GGGGEEEEEGGGGHHHHHHHHHHHHHHCT------TSEEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHH
T ss_pred             -cccccCCCCCCCCchHHHHHHHHHHHhCC------CCCEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHhCHHHHHHH
Confidence             01246999999999999999999998742      79999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHcCCCCHHHhhcCCcccCC
Q 014581          351 CEELKDFMKMHNFSSIEDFRGASIEYFT  378 (422)
Q Consensus       351 ~~~l~~~m~~~G~~si~d~~G~~~~~~~  378 (422)
                      .++|++||+++||+|++|++|....+-.
T Consensus       321 ~~~l~~~m~~~G~~si~el~G~~~~~~~  348 (354)
T 4ef8_A          321 TSELLGVMAKKRYQTLDEFRGKVRTLDG  348 (354)
T ss_dssp             HHHHHHHHHHHTCCSGGGTTTCCBCC--
T ss_pred             HHHHHHHHHHcCCCCHHHHHHHHhcCCC
Confidence            9999999999999999999998665433
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans} Back     alignment and structure
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A* Back     alignment and structure
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ... Back     alignment and structure
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A* Back     alignment and structure
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1 Back     alignment and structure
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A* Back     alignment and structure
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A* Back     alignment and structure
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A* Back     alignment and structure
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A* Back     alignment and structure
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1 Back     alignment and structure
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A* Back     alignment and structure
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C* Back     alignment and structure
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A* Back     alignment and structure
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A* Back     alignment and structure
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1 Back     alignment and structure
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans} Back     alignment and structure
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A* Back     alignment and structure
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A* Back     alignment and structure
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A* Back     alignment and structure
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A* Back     alignment and structure
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0 Back     alignment and structure
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A* Back     alignment and structure
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A* Back     alignment and structure
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ... Back     alignment and structure
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A* Back     alignment and structure
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A* Back     alignment and structure
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A* Back     alignment and structure
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A* Back     alignment and structure
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A* Back     alignment and structure
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A* Back     alignment and structure
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A* Back     alignment and structure
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A* Back     alignment and structure
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 Back     alignment and structure
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0 Back     alignment and structure
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A* Back     alignment and structure
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440} Back     alignment and structure
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus} Back     alignment and structure
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A* Back     alignment and structure
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex} Back     alignment and structure
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A* Back     alignment and structure
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1 Back     alignment and structure
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A* Back     alignment and structure
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A* Back     alignment and structure
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp} Back     alignment and structure
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum} Back     alignment and structure
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis} Back     alignment and structure
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8} Back     alignment and structure
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A* Back     alignment and structure
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A Back     alignment and structure
>4gbu_A NADPH dehydrogenase 1; alpha/beta barrel, enenone reductase, alkene reductase, NADP oxidoreductase, carvone, enenatioselectivity; HET: 0WV 1PE FMN; 1.18A {Saccharomyces pastorianus} PDB: 4ge8_A* 1oya_A* 1oyb_A* 1oyc_A* 3tx9_A* 3rnd_A* 1k02_A* 1k03_A* 1bwk_A* 1bwl_A* Back     alignment and structure
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A* Back     alignment and structure
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum} Back     alignment and structure
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A* Back     alignment and structure
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A* Back     alignment and structure
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1 Back     alignment and structure
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A Back     alignment and structure
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B* Back     alignment and structure
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A* Back     alignment and structure
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1 Back     alignment and structure
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A* Back     alignment and structure
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A* Back     alignment and structure
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1 Back     alignment and structure
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A Back     alignment and structure
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ... Back     alignment and structure
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1 Back     alignment and structure
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A Back     alignment and structure
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G* Back     alignment and structure
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A* Back     alignment and structure
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina} Back     alignment and structure
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4 Back     alignment and structure
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp} Back     alignment and structure
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0 Back     alignment and structure
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A Back     alignment and structure
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A* Back     alignment and structure
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1 Back     alignment and structure
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus} Back     alignment and structure
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A* Back     alignment and structure
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima} Back     alignment and structure
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A Back     alignment and structure
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A Back     alignment and structure
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5 Back     alignment and structure
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A Back     alignment and structure
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1 Back     alignment and structure
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A Back     alignment and structure
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus} Back     alignment and structure
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A Back     alignment and structure
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A* Back     alignment and structure
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0 Back     alignment and structure
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1 Back     alignment and structure
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A Back     alignment and structure
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae} Back     alignment and structure
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5 Back     alignment and structure
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A Back     alignment and structure
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A Back     alignment and structure
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii} Back     alignment and structure
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A* Back     alignment and structure
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G* Back     alignment and structure
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp} Back     alignment and structure
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2 Back     alignment and structure
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A* Back     alignment and structure
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni} Back     alignment and structure
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A Back     alignment and structure
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2 Back     alignment and structure
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A Back     alignment and structure
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A Back     alignment and structure
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A Back     alignment and structure
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A* Back     alignment and structure
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica} Back     alignment and structure
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A* Back     alignment and structure
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri} Back     alignment and structure
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0 Back     alignment and structure
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A* Back     alignment and structure
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A Back     alignment and structure
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A* Back     alignment and structure
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A Back     alignment and structure
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2 Back     alignment and structure
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A* Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1 Back     alignment and structure
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2 Back     alignment and structure
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis} Back     alignment and structure
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9 Back     alignment and structure
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A* Back     alignment and structure
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A* Back     alignment and structure
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1 Back     alignment and structure
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A Back     alignment and structure
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis} Back     alignment and structure
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A* Back     alignment and structure
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A Back     alignment and structure
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A Back     alignment and structure
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3} Back     alignment and structure
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus} Back     alignment and structure
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A* Back     alignment and structure
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti} Back     alignment and structure
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A Back     alignment and structure
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1 Back     alignment and structure
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A Back     alignment and structure
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A Back     alignment and structure
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ... Back     alignment and structure
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1 Back     alignment and structure
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4 Back     alignment and structure
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A Back     alignment and structure
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A Back     alignment and structure
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A* Back     alignment and structure
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7 Back     alignment and structure
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A Back     alignment and structure
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A* Back     alignment and structure
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A Back     alignment and structure
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A Back     alignment and structure
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A Back     alignment and structure
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides} Back     alignment and structure
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus} Back     alignment and structure
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A Back     alignment and structure
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1 Back     alignment and structure
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp} Back     alignment and structure
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1 Back     alignment and structure
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A Back     alignment and structure
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens} Back     alignment and structure
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A Back     alignment and structure
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A Back     alignment and structure
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3} Back     alignment and structure
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus} Back     alignment and structure
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1 Back     alignment and structure
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1 Back     alignment and structure
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A* Back     alignment and structure
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp} Back     alignment and structure
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1 Back     alignment and structure
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1 Back     alignment and structure
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1 Back     alignment and structure
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A Back     alignment and structure
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A Back     alignment and structure
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima} Back     alignment and structure
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A* Back     alignment and structure
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti} Back     alignment and structure
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A* Back     alignment and structure
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B Back     alignment and structure
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample} Back     alignment and structure
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi} Back     alignment and structure
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1 Back     alignment and structure
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A* Back     alignment and structure
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A Back     alignment and structure
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A Back     alignment and structure
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A* Back     alignment and structure
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40} Back     alignment and structure
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti} Back     alignment and structure
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A* Back     alignment and structure
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A Back     alignment and structure
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941} Back     alignment and structure
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A* Back     alignment and structure
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A Back     alignment and structure
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A Back     alignment and structure
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O Back     alignment and structure
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A* Back     alignment and structure
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii} Back     alignment and structure
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A* Back     alignment and structure
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium} Back     alignment and structure
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp} Back     alignment and structure
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str} Back     alignment and structure
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis} Back     alignment and structure
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa} Back     alignment and structure
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana} Back     alignment and structure
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP} Back     alignment and structure
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ... Back     alignment and structure
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A* Back     alignment and structure
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A Back     alignment and structure
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0 Back     alignment and structure
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1 Back     alignment and structure
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti} Back     alignment and structure
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A Back     alignment and structure
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A* Back     alignment and structure
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A* Back     alignment and structure
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum} Back     alignment and structure
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5 Back     alignment and structure
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A Back     alignment and structure
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus} Back     alignment and structure
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A Back     alignment and structure
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A* Back     alignment and structure
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa} Back     alignment and structure
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A Back     alignment and structure
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP} Back     alignment and structure
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus} Back     alignment and structure
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0 Back     alignment and structure
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A* Back     alignment and structure
>1eix_A Orotidine 5'-monophosphate decarboxylase; alpha-beta-barrel, protein-inhibitor complex, homodimer, lyase; HET: BMQ; 2.50A {Escherichia coli} SCOP: c.1.2.3 PDB: 1jjk_A* 1l2u_A Back     alignment and structure
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A* Back     alignment and structure
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1 Back     alignment and structure
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii} Back     alignment and structure
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A Back     alignment and structure
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified} Back     alignment and structure
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A Back     alignment and structure
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5 Back     alignment and structure
>3ru6_A Orotidine 5'-phosphate decarboxylase; structural genomics, center for structural genomics of infec diseases (csgid), TIM-barrel; 1.80A {Campylobacter jejuni subsp} Back     alignment and structure
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0 Back     alignment and structure
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A Back     alignment and structure
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis} Back     alignment and structure
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8 Back     alignment and structure
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP} Back     alignment and structure
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A Back     alignment and structure
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A* Back     alignment and structure
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis} Back     alignment and structure
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A Back     alignment and structure
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str} Back     alignment and structure
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A* Back     alignment and structure
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A* Back     alignment and structure
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A Back     alignment and structure
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A Back     alignment and structure
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens} Back     alignment and structure
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A* Back     alignment and structure
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A Back     alignment and structure
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis} Back     alignment and structure
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A Back     alignment and structure
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A* Back     alignment and structure
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A* Back     alignment and structure
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A* Back     alignment and structure
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A Back     alignment and structure
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A* Back     alignment and structure
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae} Back     alignment and structure
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A Back     alignment and structure
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum} Back     alignment and structure
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A* Back     alignment and structure
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus} Back     alignment and structure
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A* Back     alignment and structure
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A* Back     alignment and structure
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A Back     alignment and structure
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa} Back     alignment and structure
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199} Back     alignment and structure
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum} Back     alignment and structure
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A* Back     alignment and structure
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A* Back     alignment and structure
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A* Back     alignment and structure
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6 Back     alignment and structure
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661} Back     alignment and structure
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A Back     alignment and structure
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae} Back     alignment and structure
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix} Back     alignment and structure
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1 Back     alignment and structure
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica} Back     alignment and structure
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus} Back     alignment and structure
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831} Back     alignment and structure
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans} Back     alignment and structure
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A* Back     alignment and structure
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A Back     alignment and structure
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum} Back     alignment and structure
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A* Back     alignment and structure
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae} Back     alignment and structure
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A Back     alignment and structure
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana} Back     alignment and structure
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A Back     alignment and structure
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A* Back     alignment and structure
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A Back     alignment and structure
>3ldv_A Orotidine 5'-phosphate decarboxylase; structural genomics, infectious diseases; 1.77A {Vibrio cholerae o1 biovar el tor} PDB: 3uwq_A* Back     alignment and structure
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A Back     alignment and structure
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str} Back     alignment and structure
>3tr2_A Orotidine 5'-phosphate decarboxylase; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.00A {Coxiella burnetii} Back     alignment and structure
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A Back     alignment and structure
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8 Back     alignment and structure
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A Back     alignment and structure
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1 Back     alignment and structure
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A Back     alignment and structure
>1dbt_A Orotidine 5'-phosphate decarboxylase; UMP, TIM barrel, lyase; HET: U5P; 2.40A {Bacillus subtilis} SCOP: c.1.2.3 Back     alignment and structure
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A Back     alignment and structure
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A* Back     alignment and structure
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A* Back     alignment and structure
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A* Back     alignment and structure
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A Back     alignment and structure
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0 Back     alignment and structure
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A* Back     alignment and structure
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1 Back     alignment and structure
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7 Back     alignment and structure
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A Back     alignment and structure
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4 Back     alignment and structure
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A* Back     alignment and structure
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A* Back     alignment and structure
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A Back     alignment and structure
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A Back     alignment and structure
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A* Back     alignment and structure
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0 Back     alignment and structure
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A* Back     alignment and structure
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia} Back     alignment and structure
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0 Back     alignment and structure
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str} Back     alignment and structure
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp} Back     alignment and structure
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A Back     alignment and structure
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A Back     alignment and structure
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A Back     alignment and structure
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus} Back     alignment and structure
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A* Back     alignment and structure
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ... Back     alignment and structure
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1 Back     alignment and structure
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A* Back     alignment and structure
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A Back     alignment and structure
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A Back     alignment and structure
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus} Back     alignment and structure
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1 Back     alignment and structure
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri} Back     alignment and structure
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A* Back     alignment and structure
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A Back     alignment and structure
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0 Back     alignment and structure
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A Back     alignment and structure
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9 Back     alignment and structure
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440} Back     alignment and structure
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified} Back     alignment and structure
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A* Back     alignment and structure
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B* Back     alignment and structure
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8} Back     alignment and structure
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus} Back     alignment and structure
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp} Back     alignment and structure
>1vqt_A Orotidine 5'-phosphate decarboxylase; TM0332, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.00A {Thermotoga maritima} SCOP: c.1.2.3 Back     alignment and structure
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A* Back     alignment and structure
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A* Back     alignment and structure
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ... Back     alignment and structure
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0 Back     alignment and structure
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0 Back     alignment and structure
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A Back     alignment and structure
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A* Back     alignment and structure
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp} Back     alignment and structure
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A Back     alignment and structure
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A* Back     alignment and structure
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831} Back     alignment and structure
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ... Back     alignment and structure
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A* Back     alignment and structure
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str} Back     alignment and structure
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C* Back     alignment and structure
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A* Back     alignment and structure
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A Back     alignment and structure
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A Back     alignment and structure
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A* Back     alignment and structure
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti} Back     alignment and structure
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A Back     alignment and structure
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A* Back     alignment and structure
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A* Back     alignment and structure
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A Back     alignment and structure
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472} Back     alignment and structure
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 Back     alignment and structure
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1 Back     alignment and structure
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A* Back     alignment and structure
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A* Back     alignment and structure
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus} Back     alignment and structure
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae} Back     alignment and structure
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661} Back     alignment and structure
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A Back     alignment and structure
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex} Back     alignment and structure
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0 Back     alignment and structure
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor} Back     alignment and structure
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa} Back     alignment and structure
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A Back     alignment and structure
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp} Back     alignment and structure
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ... Back     alignment and structure
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus} Back     alignment and structure
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum} Back     alignment and structure
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A* Back     alignment and structure
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A* Back     alignment and structure
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans} Back     alignment and structure
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4 Back     alignment and structure
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A* Back     alignment and structure
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1 Back     alignment and structure
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A* Back     alignment and structure
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa} Back     alignment and structure
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A* Back     alignment and structure
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A* Back     alignment and structure
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A Back     alignment and structure
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779} Back     alignment and structure
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A Back     alignment and structure
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1 Back     alignment and structure
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A* Back     alignment and structure
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A Back     alignment and structure
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1 Back     alignment and structure
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus} Back     alignment and structure
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A* Back     alignment and structure
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis} Back     alignment and structure
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A Back     alignment and structure
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus} Back     alignment and structure
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A* Back     alignment and structure
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A Back     alignment and structure
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A Back     alignment and structure
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0 Back     alignment and structure
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A Back     alignment and structure
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis} Back     alignment and structure
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A Back     alignment and structure
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A* Back     alignment and structure
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A Back     alignment and structure
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A* Back     alignment and structure
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A Back     alignment and structure
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1 Back     alignment and structure
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5 Back     alignment and structure
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A* Back     alignment and structure
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A* Back     alignment and structure
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0 Back     alignment and structure
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei} Back     alignment and structure
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A Back     alignment and structure
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei} Back     alignment and structure
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis} Back     alignment and structure
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A* Back     alignment and structure
>2ffc_A Orotidine 5-monophosphate decarboxylase; PV-PF10_0225, SGC, structural genomics, struc genomics consortium, lyase; HET: U5P; 1.70A {Plasmodium vivax} SCOP: c.1.2.3 PDB: 2guu_A* Back     alignment and structure
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str} Back     alignment and structure
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0 Back     alignment and structure
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A Back     alignment and structure
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei} Back     alignment and structure
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A* Back     alignment and structure
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A Back     alignment and structure
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus} Back     alignment and structure
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A* Back     alignment and structure
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A* Back     alignment and structure
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens} Back     alignment and structure
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica} Back     alignment and structure
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X* Back     alignment and structure
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A* Back     alignment and structure
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans} Back     alignment and structure
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A Back     alignment and structure
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4 Back     alignment and structure
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A Back     alignment and structure
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406} Back     alignment and structure
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis} Back     alignment and structure
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae} Back     alignment and structure
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0 Back     alignment and structure
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A* Back     alignment and structure
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A* Back     alignment and structure
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis} Back     alignment and structure
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa} Back     alignment and structure
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus} Back     alignment and structure
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A* Back     alignment and structure
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str} Back     alignment and structure
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A* Back     alignment and structure
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2 Back     alignment and structure
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A* Back     alignment and structure
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D* Back     alignment and structure
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A* Back     alignment and structure
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A Back     alignment and structure
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa} Back     alignment and structure
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1 Back     alignment and structure
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A* Back     alignment and structure
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A Back     alignment and structure
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A* Back     alignment and structure
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans} Back     alignment and structure
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str} Back     alignment and structure
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5 Back     alignment and structure
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A* Back     alignment and structure
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1 Back     alignment and structure
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A Back     alignment and structure
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A* Back     alignment and structure
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A* Back     alignment and structure
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1 Back     alignment and structure
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis} Back     alignment and structure
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae} Back     alignment and structure
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1 Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 422
d1gtea2312 c.1.4.1 (A:533-844) Dihydropyrimidine dehydrogenas 4e-62
d2b4ga1312 c.1.4.1 (A:2-313) Dihydroorotate dehydrogenase {Tr 6e-50
d1juba_311 c.1.4.1 (A:) Dihydroorotate dehydrogenase {Lactoco 1e-49
d1ep3a_311 c.1.4.1 (A:) Dihydroorotate dehydrogenase {Lactoco 2e-41
d1tv5a1409 c.1.4.1 (A:158-566) Dihydroorotate dehydrogenase { 3e-36
d1d3ga_367 c.1.4.1 (A:) Dihydroorotate dehydrogenase {Human ( 4e-36
d1f76a_336 c.1.4.1 (A:) Dihydroorotate dehydrogenase {Escheri 2e-27
d1vcfa1310 c.1.4.1 (A:23-332) Isopentenyl-diphosphate delta-i 1e-15
d1p0ka_329 c.1.4.1 (A:) Isopentenyl-diphosphate delta-isomera 3e-08
>d1gtea2 c.1.4.1 (A:533-844) Dihydropyrimidine dehydrogenase, domain 4 {Pig (Sus scrofa) [TaxId: 9823]} Length = 312 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: Dihydropyrimidine dehydrogenase, domain 4
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  201 bits (511), Expect = 4e-62
 Identities = 118/318 (37%), Positives = 178/318 (55%), Gaps = 8/318 (2%)

Query: 47  LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYAR 106
           +S+ + GL+  NPF + S  P T+ ++++RAF+ GWG  + KT SLD   V NV+PR  R
Sbjct: 1   ISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVR 60

Query: 107 LRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWE 166
               +          + NIELIS++      +   +LKA +PD I+IASIM  YNK  W 
Sbjct: 61  GTT-SGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWM 119

Query: 167 ELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLLEEVCGWINAKATVPVWAKMT 226
           EL  + E +G DA+E+N SCPHGM ER MG A GQD  L+  +C W+     +P +AK+T
Sbjct: 120 ELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLT 179

Query: 227 PNITDITEPARVALRSGSEGVSAINTIMSVMGIDLK-TLRPEPCVEGYSTPGGYSCKAVH 285
           PN+TDI   AR A   G++GV+A NT+  +MG+    T  P       +T GG S  A+ 
Sbjct: 180 PNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIR 239

Query: 286 PIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYG 345
           PIAL  V +IA+ +        + +   GG+++     +F+  GA+ +QVC+ V    + 
Sbjct: 240 PIALRAVTTIARAL------PGFPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQDFT 293

Query: 346 LVKRLCEELKDFMKMHNF 363
           +++  C  LK  + + + 
Sbjct: 294 VIQDYCTGLKALLYLKSI 311
>d2b4ga1 c.1.4.1 (A:2-313) Dihydroorotate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} Length = 312 Back     information, alignment and structure
>d1juba_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Lactococcus lactis, isozyme A [TaxId: 1358]} Length = 311 Back     information, alignment and structure
>d1ep3a_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Lactococcus lactis, isozyme B [TaxId: 1358]} Length = 311 Back     information, alignment and structure
>d1tv5a1 c.1.4.1 (A:158-566) Dihydroorotate dehydrogenase {Plasmodium falciparum [TaxId: 5833]} Length = 409 Back     information, alignment and structure
>d1d3ga_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 367 Back     information, alignment and structure
>d1f76a_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Escherichia coli [TaxId: 562]} Length = 336 Back     information, alignment and structure
>d1vcfa1 c.1.4.1 (A:23-332) Isopentenyl-diphosphate delta-isomerase {Thermus thermophilus [TaxId: 274]} Length = 310 Back     information, alignment and structure
>d1p0ka_ c.1.4.1 (A:) Isopentenyl-diphosphate delta-isomerase {Bacillus subtilis [TaxId: 1423]} Length = 329 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query422
d1gtea2312 Dihydropyrimidine dehydrogenase, domain 4 {Pig (Su 100.0
d2b4ga1312 Dihydroorotate dehydrogenase {Trypanosoma brucei [ 100.0
d1juba_311 Dihydroorotate dehydrogenase {Lactococcus lactis, 100.0
d1tv5a1409 Dihydroorotate dehydrogenase {Plasmodium falciparu 100.0
d1d3ga_367 Dihydroorotate dehydrogenase {Human (Homo sapiens) 100.0
d1ep3a_311 Dihydroorotate dehydrogenase {Lactococcus lactis, 100.0
d1f76a_336 Dihydroorotate dehydrogenase {Escherichia coli [Ta 100.0
d1vhna_305 Putative flavin oxidoreducatase TM0096 {Thermotoga 99.92
d1vcfa1310 Isopentenyl-diphosphate delta-isomerase {Thermus t 99.88
d1p0ka_329 Isopentenyl-diphosphate delta-isomerase {Bacillus 99.87
d1z41a1337 NADPH dehydrogenase NamA {Bacillus subtilis [TaxId 99.87
d1ps9a1330 2,4-dienoyl-CoA reductase, N-terminal domain {Esch 99.86
d1djqa1340 Trimethylamine dehydrogenase, N-terminal domain {M 99.82
d1tb3a1349 Hydroxyacid oxidase {Rat (Rattus norvegicus) [TaxI 99.81
d1vyra_363 Pentaerythritol tetranirate reductase {Enterobacte 99.76
d1gwja_374 Morphinone reductase {Pseudomonas putida [TaxId: 3 99.74
d1goxa_359 Glycolate oxidase {Spinach (Spinacia oleracea) [Ta 99.73
d1oyaa_399 Old yellow enzyme (OYE) {Lager yeast (Saccharomyce 99.71
d1kbia1414 Flavocytochrome b2, C-terminal domain {Baker's yea 99.7
d1q45a_380 12-oxophytodienoate reductase (OPR, OYE homolog) { 99.68
d1vrda1330 Inosine monophosphate dehydrogenase (IMPDH) {Therm 99.68
d1p4ca_353 Membrane-associated (S)-mandelate dehydrogenase {P 99.68
d1icpa_364 12-oxophytodienoate reductase (OPR, OYE homolog) { 99.67
d1eepa_388 Inosine monophosphate dehydrogenase (IMPDH) {Lyme 99.61
d1zfja1365 Inosine monophosphate dehydrogenase (IMPDH) {Strep 99.6
d1jr1a1378 Inosine monophosphate dehydrogenase (IMPDH) {Chine 99.59
d2cu0a1368 Inosine monophosphate dehydrogenase (IMPDH) {Pyroc 99.46
d1pvna1362 Inosine monophosphate dehydrogenase (IMPDH) {Tritr 99.42
d1y0ea_222 Putative N-acetylmannosamine-6-phosphate 2-epimera 99.34
d1yxya1230 Putative N-acetylmannosamine-6-phosphate 2-epimera 99.17
d1qopa_267 Trp synthase alpha-subunit {Salmonella typhimurium 99.1
d1rd5a_261 Trp synthase alpha-subunit {Maize (Zea mays) [TaxI 99.07
d1xm3a_251 Thiazole biosynthesis protein ThiG {Bacillus subti 99.02
d1ea0a2771 Alpha subunit of glutamate synthase, central and F 98.97
d1geqa_248 Trp synthase alpha-subunit {Archaeon Pyrococcus fu 98.97
d1ofda2809 Alpha subunit of glutamate synthase, central and F 98.91
d1wv2a_243 Thiazole biosynthesis protein ThiG {Pseudomonas ae 98.88
d1ujpa_271 Trp synthase alpha-subunit {Thermus thermophilus [ 98.8
d1wa3a1202 KDPG aldolase {Thermotoga maritima [TaxId: 2336]} 98.64
d2flia1217 D-ribulose-5-phosphate 3-epimerase {Streptococcus 98.57
d1h5ya_252 Cyclase subunit (or domain) of imidazoleglycerolph 98.47
d1mzha_225 Deoxyribose-phosphate aldolase DeoC {Aquifex aeoli 98.42
d1thfd_253 Cyclase subunit (or domain) of imidazoleglycerolph 98.39
d1ka9f_251 Cyclase subunit (or domain) of imidazoleglycerolph 98.37
d1o0ya_251 Deoxyribose-phosphate aldolase DeoC {Thermotoga ma 98.33
d1ub3a_211 Deoxyribose-phosphate aldolase DeoC {Thermus therm 98.31
d1rpxa_230 D-ribulose-5-phosphate 3-epimerase {Potato (Solanu 98.3
d1jvna1323 Cyclase subunit (or domain) of imidazoleglycerolph 98.25
d1tqja_221 D-ribulose-5-phosphate 3-epimerase {Synechocystis 98.16
d1n7ka_234 Deoxyribose-phosphate aldolase DeoC {Archaeon Aero 98.16
d1a53a_247 Indole-3-glycerophosphate synthase, IPGS {Archaeon 98.14
d1q6oa_213 3-keto-L-gulonate 6-phosphate decarboxylase {Esche 98.11
d1tqxa_221 D-ribulose-5-phosphate 3-epimerase {Plasmodium fal 98.1
d1vc4a_254 Indole-3-glycerophosphate synthase, IPGS {Thermus 98.05
d1xi3a_206 Thiamin phosphate synthase {Archaeon (Pyrococcus f 98.05
d1h1ya_220 D-ribulose-5-phosphate 3-epimerase {Rice (Oryza sa 98.03
d1vhca_212 Hypothetical protein HI0047 {Haemophilus influenza 98.02
d1s2wa_275 Phosphoenolpyruvate mutase {Blue mussel (Mytilus e 97.99
d1viza_229 PcrB protein homolog YerE {Bacillus subtilis [TaxI 97.85
d1znna1254 Pyridoxal biosynthesis lyase PdxS {Bacillus stearo 97.85
d2f6ua1231 (S)-3-O-geranylgeranylglyceryl phosphate synthase 97.83
d1vzwa1239 Phosphoribosylformimino-5-aminoimidazole carboxami 97.79
d1muma_289 2-methylisocitrate lyase {Escherichia coli [TaxId: 97.78
d1thfd_253 Cyclase subunit (or domain) of imidazoleglycerolph 97.77
d1wbha1213 KDPG aldolase {Escherichia coli [TaxId: 562]} 97.72
d1vcva1226 Deoxyribose-phosphate aldolase DeoC {Archaeon Pyro 97.72
d2tpsa_226 Thiamin phosphate synthase {Bacillus subtilis [Tax 97.71
d1h5ya_252 Cyclase subunit (or domain) of imidazoleglycerolph 97.65
d1ka9f_251 Cyclase subunit (or domain) of imidazoleglycerolph 97.62
d1mxsa_216 KDPG aldolase {Pseudomonas putida [TaxId: 303]} 97.56
d1w0ma_226 Triosephosphate isomerase {Thermoproteus tenax [Ta 97.55
d1qo2a_241 Phosphoribosylformimino-5-aminoimidazole carboxami 97.53
d1p1xa_250 Deoxyribose-phosphate aldolase DeoC {Escherichia c 97.5
d1i4na_251 Indole-3-glycerophosphate synthase, IPGS {Thermoto 97.43
d1jvna1 323 Cyclase subunit (or domain) of imidazoleglycerolph 97.43
d1vzwa1239 Phosphoribosylformimino-5-aminoimidazole carboxami 97.33
d1piia2254 Indole-3-glycerophosphate synthase, IPGS {Escheric 97.29
d1f74a_293 N-acetylneuraminate lyase {Haemophilus influenzae 97.27
d1xkya1292 Dihydrodipicolinate synthase {Bacillus anthracis [ 97.24
d1hg3a_224 Triosephosphate isomerase {Archaeon Pyrococcus woe 97.14
d1vhca_212 Hypothetical protein HI0047 {Haemophilus influenza 97.07
d1z41a1337 NADPH dehydrogenase NamA {Bacillus subtilis [TaxId 97.02
d2chra1244 Chlormuconate cycloisomerase {Alcaligenes eutrophu 97.01
d1o5ka_295 Dihydrodipicolinate synthase {Thermotoga maritima 97.0
d1vr6a1338 3-deoxy-D-arabino-heptulosonate-7-phosphate syntha 96.99
d2czda1206 Orotidine 5'-monophosphate decarboxylase (OMP deca 96.92
d1mxsa_216 KDPG aldolase {Pseudomonas putida [TaxId: 303]} 96.84
d2a4aa1256 Fructose-1,6-bisphosphate aldolase {Plasmodium yoe 96.8
d1rvka1255 Hypothetical protein Atu3453 {Agrobacterium tumefa 96.67
d1nu5a1243 Chlormuconate cycloisomerase {Pseudomonas sp. p51 96.66
d1ps9a1330 2,4-dienoyl-CoA reductase, N-terminal domain {Esch 96.66
d1twda_247 Copper homeostasis protein CutC {Shigella flexneri 96.48
d1xxxa1296 Dihydrodipicolinate synthase {Mycobacterium tuberc 96.47
d1km4a_212 Orotidine 5'-monophosphate decarboxylase (OMP deca 96.47
d1ykwa1283 Ribulose 1,5-bisphosphate carboxylase-oxygenase {C 96.41
d1zfja1 365 Inosine monophosphate dehydrogenase (IMPDH) {Strep 96.4
d1hl2a_295 N-acetylneuraminate lyase {Escherichia coli [TaxId 96.33
d1m3ua_262 Ketopantoate hydroxymethyltransferase PanB {Escher 96.29
d1eixa_231 Orotidine 5'-monophosphate decarboxylase (OMP deca 96.28
d1o66a_260 Ketopantoate hydroxymethyltransferase PanB {Neisse 96.16
d2a6na1292 Dihydrodipicolinate synthase {Escherichia coli [Ta 96.1
d1qopa_267 Trp synthase alpha-subunit {Salmonella typhimurium 96.06
d1qo2a_241 Phosphoribosylformimino-5-aminoimidazole carboxami 96.05
d1w3ia_293 2-keto-3-deoxy gluconate aldolase Eda {Sulfolobus 96.02
d1wbha1213 KDPG aldolase {Escherichia coli [TaxId: 562]} 95.99
d1tzza1247 Hypothetical protein Bll6730 {Bradyrhizobium japon 95.97
d1muca1242 Muconate-lactonizing enzyme {Pseudomonas putida [T 95.77
d1geha1307 Ribulose 1,5-bisphosphate carboxylase-oxygenase {A 95.72
d1wdda1325 Ribulose 1,5-bisphosphate carboxylase-oxygenase {R 95.71
d1eepa_388 Inosine monophosphate dehydrogenase (IMPDH) {Lyme 95.7
d1a53a_247 Indole-3-glycerophosphate synthase, IPGS {Archaeon 95.7
d1yxya1230 Putative N-acetylmannosamine-6-phosphate 2-epimera 95.45
d1gvfa_284 Tagatose-1,6-bisphosphate aldolase {Escherichia co 95.42
d1s2wa_275 Phosphoenolpyruvate mutase {Blue mussel (Mytilus e 95.42
d2gl5a1278 Putative dehydratase protein STM2273 {Salmonella t 95.41
d1rd5a_261 Trp synthase alpha-subunit {Maize (Zea mays) [TaxI 95.28
d1o5ka_295 Dihydrodipicolinate synthase {Thermotoga maritima 95.24
d1djqa1340 Trimethylamine dehydrogenase, N-terminal domain {M 95.18
d1wa3a1202 KDPG aldolase {Thermotoga maritima [TaxId: 2336]} 95.11
d1to3a_291 Putative aldolase YihT {Salmonella typhimurium [Ta 95.08
d1piia1198 N-(5'phosphoribosyl)antranilate isomerase, PRAI {E 94.96
d1sjda1242 N-acylamino acid racemase {Amycolatopsis sp. [TaxI 94.95
d1jpma1234 L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: 94.94
d1ojxa_251 Archaeal fructose 1,6-bisphosphate aldolase {Archa 94.89
d1vyra_363 Pentaerythritol tetranirate reductase {Enterobacte 94.83
d1oy0a_262 Ketopantoate hydroxymethyltransferase PanB {Mycoba 94.78
d2d69a1291 Ribulose 1,5-bisphosphate carboxylase-oxygenase {A 94.77
d1vhna_305 Putative flavin oxidoreducatase TM0096 {Thermotoga 94.72
d1dbta_237 Orotidine 5'-monophosphate decarboxylase (OMP deca 94.71
d1muma_289 2-methylisocitrate lyase {Escherichia coli [TaxId: 94.68
d1wufa1244 N-acylamino acid racemase {Listeria innocua [TaxId 94.68
d1qpoa1169 Quinolinic acid phosphoribosyltransferase (Nicotin 94.6
d1piia2254 Indole-3-glycerophosphate synthase, IPGS {Escheric 94.43
d1gqna_252 Type I 3-dehydroquinate dehydratase {Salmonella ty 94.42
d1y0ea_222 Putative N-acetylmannosamine-6-phosphate 2-epimera 94.3
d1xkya1292 Dihydrodipicolinate synthase {Bacillus anthracis [ 94.25
d1xxxa1296 Dihydrodipicolinate synthase {Mycobacterium tuberc 94.23
d1yeya1252 RTS beta protein {Xanthomonas campestris pv. campe 94.23
d1f6ya_262 Methyltetrahydrofolate: corrinoid/iron-sulfur prot 94.12
d1m5wa_242 Pyridoxine 5'-phosphate synthase {Escherichia coli 93.91
d2p10a1197 Uncharacterized protein Mll9387 {Mesorhizobium lot 93.89
d1jr1a1 378 Inosine monophosphate dehydrogenase (IMPDH) {Chine 93.79
d1rvga_305 Fructose-bisphosphate aldolase (FBP aldolase) {The 93.79
d1o4ua1170 Quinolinic acid phosphoribosyltransferase (Nicotin 93.71
d1pvna1362 Inosine monophosphate dehydrogenase (IMPDH) {Tritr 93.69
d1vc4a_254 Indole-3-glycerophosphate synthase, IPGS {Thermus 93.35
d1i4na_251 Indole-3-glycerophosphate synthase, IPGS {Thermoto 93.31
d1e0ta2246 Pyruvate kinase, N-terminal domain {Escherichia co 93.24
d1vpxa_218 Decameric fructose-6-phosphate aldolase/transaldol 93.22
d1qapa1167 Quinolinic acid phosphoribosyltransferase (Nicotin 93.16
d1p0ka_329 Isopentenyl-diphosphate delta-isomerase {Bacillus 93.14
d2a6na1292 Dihydrodipicolinate synthase {Escherichia coli [Ta 93.09
d1gtea2312 Dihydropyrimidine dehydrogenase, domain 4 {Pig (Su 93.06
d1vrda1330 Inosine monophosphate dehydrogenase (IMPDH) {Therm 93.05
d1dqwa_267 Orotidine 5'-monophosphate decarboxylase (OMP deca 93.04
d2mnra1227 Mandelate racemase {Pseudomonas putida [TaxId: 303 92.86
d1v5xa_200 N-(5'phosphoribosyl)antranilate isomerase, PRAI {T 92.77
d1f74a_293 N-acetylneuraminate lyase {Haemophilus influenzae 92.5
d3bofa1260 Cobalamin-dependent methionine synthase MetH, C-te 92.34
d7reqa2168 Methylmalonyl-CoA mutase alpha subunit, C-terminal 92.04
d1hl2a_295 N-acetylneuraminate lyase {Escherichia coli [TaxId 92.0
d1sfla_236 Type I 3-dehydroquinate dehydratase {Staphylococcu 91.84
d1ub3a_211 Deoxyribose-phosphate aldolase DeoC {Thermus therm 91.83
d1bwva1328 Ribulose 1,5-bisphosphate carboxylase-oxygenase {G 91.79
d1wuea1241 N-acylamino acid racemase {Enterococcus faecalis [ 91.66
d1a3xa2265 Pyruvate kinase, N-terminal domain {Baker's yeast 91.65
d2ffca1332 Orotidine 5'-monophosphate decarboxylase (OMP deca 91.41
d2gdqa1256 Hypothetical protein YitF {Bacillus subtilis [TaxI 90.95
d1ep3a_311 Dihydroorotate dehydrogenase {Lactococcus lactis, 90.9
d1gqna_252 Type I 3-dehydroquinate dehydratase {Salmonella ty 90.79
d1r0ma1243 N-acylamino acid racemase {Deinococcus radiodurans 90.68
d1mzha_225 Deoxyribose-phosphate aldolase DeoC {Aquifex aeoli 90.26
d1o0ya_251 Deoxyribose-phosphate aldolase DeoC {Thermotoga ma 90.23
d3bofa2300 Cobalamin-dependent methionine synthase MetH, N-te 90.18
d1dxea_253 2-dehydro-3-deoxy-galactarate aldolase {Escherichi 90.02
d1l6wa_220 Decameric fructose-6-phosphate aldolase/transaldol 89.97
d1lt7a_361 Betaine-homocysteine S-methyltransferase {Human (H 89.71
d1wx0a1211 Decameric fructose-6-phosphate aldolase/transaldol 89.69
d2g50a2282 Pyruvate kinase, N-terminal domain {Rabbit (Orycto 89.26
d1twda_247 Copper homeostasis protein CutC {Shigella flexneri 89.04
d1w3ia_293 2-keto-3-deoxy gluconate aldolase Eda {Sulfolobus 88.98
d1r30a_312 Biotin synthase {Escherichia coli [TaxId: 562]} 88.9
d1a3xa2265 Pyruvate kinase, N-terminal domain {Baker's yeast 88.73
d2p10a1197 Uncharacterized protein Mll9387 {Mesorhizobium lot 88.4
d1qpoa1169 Quinolinic acid phosphoribosyltransferase (Nicotin 87.92
d1icpa_364 12-oxophytodienoate reductase (OPR, OYE homolog) { 87.49
d1vr6a1338 3-deoxy-D-arabino-heptulosonate-7-phosphate syntha 87.15
d1l6sa_323 5-aminolaevulinate dehydratase, ALAD (porphobilino 86.39
d1vpxa_218 Decameric fructose-6-phosphate aldolase/transaldol 86.34
d2tpsa_226 Thiamin phosphate synthase {Bacillus subtilis [Tax 86.09
d1dxea_253 2-dehydro-3-deoxy-galactarate aldolase {Escherichi 85.57
d1q6oa_213 3-keto-L-gulonate 6-phosphate decarboxylase {Esche 85.5
d1geqa_248 Trp synthase alpha-subunit {Archaeon Pyrococcus fu 84.97
d1nvma2289 4-hydroxy-2-oxovalerate aldolase DmpG, catalytic d 84.51
d1gwja_374 Morphinone reductase {Pseudomonas putida [TaxId: 3 84.29
d1ccwa_137 Glutamate mutase, small subunit {Clostridium cochl 84.1
d1krwa_123 NTRC receiver domain {Salmonella typhimurium [TaxI 82.95
d1vcva1226 Deoxyribose-phosphate aldolase DeoC {Archaeon Pyro 82.85
d1e0ta2246 Pyruvate kinase, N-terminal domain {Escherichia co 82.73
d2q8za1323 Protozoan orotidine monophosphate decarboxylase {P 82.39
d1ajza_282 Dihydropteroate synthetase {Escherichia coli [TaxI 82.19
d1wb0a1297 Chitotriosidase {Human (Homo sapiens) [TaxId: 9606 82.17
d1ojxa_251 Archaeal fructose 1,6-bisphosphate aldolase {Archa 82.09
d1jdfa1309 D-glucarate dehydratase {Escherichia coli [TaxId: 82.0
d1vlia2295 Spore coat polysaccharide biosynthesis protein Sps 81.65
d1nsja_205 N-(5'phosphoribosyl)antranilate isomerase, PRAI {T 81.33
d1vqta1198 Orotidine 5'-monophosphate decarboxylase (OMP deca 81.28
d1pkla2258 Pyruvate kinase, N-terminal domain {Leishmania mex 80.67
d1o66a_260 Ketopantoate hydroxymethyltransferase PanB {Neisse 80.64
d5ruba1320 Ribulose 1,5-bisphosphate carboxylase-oxygenase {R 80.54
d2cu0a1368 Inosine monophosphate dehydrogenase (IMPDH) {Pyroc 80.49
d1o4ua1170 Quinolinic acid phosphoribosyltransferase (Nicotin 80.04
>d1gtea2 c.1.4.1 (A:533-844) Dihydropyrimidine dehydrogenase, domain 4 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: FMN-linked oxidoreductases
family: FMN-linked oxidoreductases
domain: Dihydropyrimidine dehydrogenase, domain 4
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=1.4e-55  Score=432.42  Aligned_cols=310  Identities=38%  Similarity=0.684  Sum_probs=263.1

Q ss_pred             cceEeCCeecCCCceecCCCCCCCHHHHHHHHHcCCcEEEecccccCcccCCCCCCeeEeecCCCCCCCccccccccccc
Q 014581           47 LSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIE  126 (422)
Q Consensus        47 L~~~~~Gl~l~nPi~~AAg~~~~~~~~~~~~~~~G~Gavv~ktv~~~~~~~~~~~pr~~~~~~~~~~~a~~~~~Gl~n~~  126 (422)
                      |+|+|+|++|+|||++|||+++++.+.++.+.++|||++|+||++.++.+.+|++||+++......- ......++.|.+
T Consensus         1 Lsv~~~Gl~l~nPi~~Asg~~~~~~~~~~~~~~~G~G~vv~ktvt~~~~~~~n~~pr~~~~~~~~~~-~~~~~~~~~n~~   79 (312)
T d1gtea2           1 ISVEMAGLKFINPFGLASAAPTTSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPM-YGPGQSSFLNIE   79 (312)
T ss_dssp             CCEEETTEEESSSEEECSSGGGSSHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCTTCSC-CSSCCSCEEECC
T ss_pred             CcEEECCEEcCCCcEECCcCCCCCHHHHHHHHHcCCcEEEEeeecCCccccCCCCCcEEeccCCccc-cccccccccccc
Confidence            7999999999999999999888999999999999999999999998777889999999886542200 001112233444


Q ss_pred             ccCCChHHHHHHHHHHHHhhCCCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEccCCCCCCCccccccccccChhHH
Q 014581          127 LISDRPLETMLKEFKQLKALYPDKILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPERKMGAAVGQDCRLL  206 (422)
Q Consensus       127 ~~s~~~~e~~l~~i~~~k~~~~~~pvi~si~~~~~~~~~~~~a~~~~~aGaD~iElN~scP~~~~~~~~G~~l~~~~~~v  206 (422)
                      .++.++.+.|++.++.+++.+++.++++++..+.+.++|.++++.++++|+|+||+|+||||....+++|..+.++++.+
T Consensus        80 g~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~~~~~~gad~lelN~scPn~~~~~~~~~~~~~~~~~~  159 (312)
T d1gtea2          80 LISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELV  159 (312)
T ss_dssp             CSCSSCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHH
T ss_pred             cccccchhhhhhhhccccccccccccccccccccchhHHHHHHHHhccCCCCeEeeccCCCCcccccccchhhhhhHHHH
Confidence            45555699999999999988888888888877789999999999999999999999999999876777788888999999


Q ss_pred             HHHHHHHhhccCccEEEEECCCCCChHHHHHHHHHcCCCEEEEecCCcccccccccCCCCCCCC--CCCCccCCCCCCCc
Q 014581          207 EEVCGWINAKATVPVWAKMTPNITDITEPARVALRSGSEGVSAINTIMSVMGIDLKTLRPEPCV--EGYSTPGGYSCKAV  284 (422)
Q Consensus       207 ~~iv~~vr~~~~iPv~vKl~~~~~~~~~~a~~l~~aGadgi~v~n~~~~~~~id~e~~~p~~~~--~~~~~~gG~sG~~i  284 (422)
                      +++++++|+.+++||++|++|++++..++++.+.++|+++|+++|++.+...++.+. ++.+..  ......||+||+++
T Consensus       160 ~~i~~~v~~~~~~pv~vKl~~~~~~~~~i~~~~~~~g~~gi~~~n~~~~~~~~~~~~-~~~~~~~~~~~~~~gg~sG~~i  238 (312)
T d1gtea2         160 RNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGADGVTATNTVSGLMGLKADG-TPWPAVGAGKRTTYGGVSGTAI  238 (312)
T ss_dssp             HHHHHHHHHHCSSCEEEEECSCSSCHHHHHHHHHHHTCSEEEECCCEEECCCBCTTS-CBSSCBTTTTBBCCEEEESGGG
T ss_pred             HHHHHHHhhccCCceeecccccchhHHHHHHHHHHhcccceEEEeeccccccccccc-ccccccccccccccccccCcCc
Confidence            999999999999999999999999999999999999999999999987654455443 333221  12235789999999


Q ss_pred             chhHHHHHHHHHHHhhccCCCCCceEEEecCCCCHHHHHHHHHhCCCEEEEhhHHHhhhhHHHHHHHHHHHHHHHHcCCC
Q 014581          285 HPIALGKVMSIAKMMKSEFNDKDYSLSGIGGVETGGDAAEFILLGANTVQVCTGVMMHGYGLVKRLCEELKDFMKMHNFS  364 (422)
Q Consensus       285 ~p~al~~v~~i~~~~~~~~~~~~ipIIa~GGI~s~~da~~~l~aGAd~V~vgtall~~Gp~~i~~i~~~l~~~m~~~G~~  364 (422)
                      +|.++++|+++++.++      ++|||++|||++++|+.++|++|||+|||||+++++||.++++|+++|++||+++||+
T Consensus       239 ~~~al~~v~~~~~~~~------~ipIi~~GGI~~~~d~~~~l~aGA~~Vqv~ta~~~~G~~~i~~i~~~L~~~m~~~g~~  312 (312)
T d1gtea2         239 RPIALRAVTTIARALP------GFPILATGGIDSAESGLQFLHSGASVLQVCSAVQNQDFTVIQDYCTGLKALLYLKSIE  312 (312)
T ss_dssp             HHHHHHHHHHHHHHST------TCCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTSCTTHHHHHHHHHHHHHHHTTCG
T ss_pred             chhhHHHHHHHHHHcC------CCcEEEEcCCCCHHHHHHHHHcCCCeeEECHhhhccChHHHHHHHHHHHHHHHHcCCC
Confidence            9999999999999874      6999999999999999999999999999999999999999999999999999999985
>d2b4ga1 c.1.4.1 (A:2-313) Dihydroorotate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} Back     information, alignment and structure
>d1juba_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Lactococcus lactis, isozyme A [TaxId: 1358]} Back     information, alignment and structure
>d1tv5a1 c.1.4.1 (A:158-566) Dihydroorotate dehydrogenase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1d3ga_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ep3a_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Lactococcus lactis, isozyme B [TaxId: 1358]} Back     information, alignment and structure
>d1f76a_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vhna_ c.1.4.1 (A:) Putative flavin oxidoreducatase TM0096 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vcfa1 c.1.4.1 (A:23-332) Isopentenyl-diphosphate delta-isomerase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1p0ka_ c.1.4.1 (A:) Isopentenyl-diphosphate delta-isomerase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1z41a1 c.1.4.1 (A:2-338) NADPH dehydrogenase NamA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ps9a1 c.1.4.1 (A:1-330) 2,4-dienoyl-CoA reductase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1djqa1 c.1.4.1 (A:1-340) Trimethylamine dehydrogenase, N-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1tb3a1 c.1.4.1 (A:1-349) Hydroxyacid oxidase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1vyra_ c.1.4.1 (A:) Pentaerythritol tetranirate reductase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1gwja_ c.1.4.1 (A:) Morphinone reductase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1goxa_ c.1.4.1 (A:) Glycolate oxidase {Spinach (Spinacia oleracea) [TaxId: 3562]} Back     information, alignment and structure
>d1oyaa_ c.1.4.1 (A:) Old yellow enzyme (OYE) {Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]} Back     information, alignment and structure
>d1kbia1 c.1.4.1 (A:98-511) Flavocytochrome b2, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q45a_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Thale cress (Arabidopsis thaliana), OPR3 [TaxId: 3702]} Back     information, alignment and structure
>d1vrda1 c.1.5.1 (A:1-85,A:213-457) Inosine monophosphate dehydrogenase (IMPDH) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1p4ca_ c.1.4.1 (A:) Membrane-associated (S)-mandelate dehydrogenase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1icpa_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Tomato (Lycopersicon esculentum), OPR1 [TaxId: 4081]} Back     information, alignment and structure
>d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Back     information, alignment and structure
>d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1jr1a1 c.1.5.1 (A:17-112,A:233-514) Inosine monophosphate dehydrogenase (IMPDH) {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d2cu0a1 c.1.5.1 (A:3-96,A:207-480) Inosine monophosphate dehydrogenase (IMPDH) {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1pvna1 c.1.5.1 (A:2-99,A:231-494) Inosine monophosphate dehydrogenase (IMPDH) {Tritrichomonas foetus [TaxId: 5724]} Back     information, alignment and structure
>d1y0ea_ c.1.2.5 (A:) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1yxya1 c.1.2.5 (A:4-233) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1qopa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1rd5a_ c.1.2.4 (A:) Trp synthase alpha-subunit {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1xm3a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ea0a2 c.1.4.1 (A:423-1193) Alpha subunit of glutamate synthase, central and FMN domains {Azospirillum brasilense [TaxId: 192]} Back     information, alignment and structure
>d1geqa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1ofda2 c.1.4.1 (A:431-1239) Alpha subunit of glutamate synthase, central and FMN domains {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d1wv2a_ c.1.31.1 (A:) Thiazole biosynthesis protein ThiG {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1ujpa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1wa3a1 c.1.10.1 (A:2-203) KDPG aldolase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2flia1 c.1.2.2 (A:3-219) D-ribulose-5-phosphate 3-epimerase {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1h5ya_ c.1.2.1 (A:) Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1mzha_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1thfd_ c.1.2.1 (D:) Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ka9f_ c.1.2.1 (F:) Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1o0ya_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1ub3a_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rpxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
>d1jvna1 c.1.2.1 (A:230-552) Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF {Baker's yeast (Saccharomyces cerevisiae), His7 [TaxId: 4932]} Back     information, alignment and structure
>d1tqja_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Synechocystis sp. PCC 6803 [TaxId: 1148]} Back     information, alignment and structure
>d1n7ka_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Archaeon Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1a53a_ c.1.2.4 (A:) Indole-3-glycerophosphate synthase, IPGS {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1q6oa_ c.1.2.3 (A:) 3-keto-L-gulonate 6-phosphate decarboxylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tqxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Plasmodium falciparum [TaxId: 5833]} Back     information, alignment and structure
>d1vc4a_ c.1.2.4 (A:) Indole-3-glycerophosphate synthase, IPGS {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1xi3a_ c.1.3.1 (A:) Thiamin phosphate synthase {Archaeon (Pyrococcus furiosus) [TaxId: 2261]} Back     information, alignment and structure
>d1h1ya_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1s2wa_ c.1.12.7 (A:) Phosphoenolpyruvate mutase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d1viza_ c.1.4.1 (A:) PcrB protein homolog YerE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1znna1 c.1.2.6 (A:18-271) Pyridoxal biosynthesis lyase PdxS {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d2f6ua1 c.1.4.1 (A:1001-1231) (S)-3-O-geranylgeranylglyceryl phosphate synthase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1vzwa1 c.1.2.1 (A:2-240) Phosphoribosylformimino-5-aminoimidazole carboxamide ribotite isomerase HisA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1muma_ c.1.12.7 (A:) 2-methylisocitrate lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1thfd_ c.1.2.1 (D:) Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vcva1 c.1.10.1 (A:1-226) Deoxyribose-phosphate aldolase DeoC {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d2tpsa_ c.1.3.1 (A:) Thiamin phosphate synthase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1h5ya_ c.1.2.1 (A:) Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1ka9f_ c.1.2.1 (F:) Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1w0ma_ c.1.1.1 (A:) Triosephosphate isomerase {Thermoproteus tenax [TaxId: 2271]} Back     information, alignment and structure
>d1qo2a_ c.1.2.1 (A:) Phosphoribosylformimino-5-aminoimidazole carboxamide ribotite isomerase HisA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1p1xa_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1i4na_ c.1.2.4 (A:) Indole-3-glycerophosphate synthase, IPGS {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1jvna1 c.1.2.1 (A:230-552) Cyclase subunit (or domain) of imidazoleglycerolphosphate synthase HisF {Baker's yeast (Saccharomyces cerevisiae), His7 [TaxId: 4932]} Back     information, alignment and structure
>d1vzwa1 c.1.2.1 (A:2-240) Phosphoribosylformimino-5-aminoimidazole carboxamide ribotite isomerase HisA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1piia2 c.1.2.4 (A:1-254) Indole-3-glycerophosphate synthase, IPGS {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1f74a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1xkya1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d1hg3a_ c.1.1.1 (A:) Triosephosphate isomerase {Archaeon Pyrococcus woesei [TaxId: 2262]} Back     information, alignment and structure
>d1vhca_ c.1.10.1 (A:) Hypothetical protein HI0047 {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1z41a1 c.1.4.1 (A:2-338) NADPH dehydrogenase NamA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2chra1 c.1.11.2 (A:127-370) Chlormuconate cycloisomerase {Alcaligenes eutrophus [TaxId: 106590]} Back     information, alignment and structure
>d1o5ka_ c.1.10.1 (A:) Dihydrodipicolinate synthase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vr6a1 c.1.10.4 (A:1-338) 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2czda1 c.1.2.3 (A:1-206) Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d2a4aa1 c.1.10.1 (A:3-258) Fructose-1,6-bisphosphate aldolase {Plasmodium yoelii yoelii [TaxId: 73239]} Back     information, alignment and structure
>d1rvka1 c.1.11.2 (A:127-381) Hypothetical protein Atu3453 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d1nu5a1 c.1.11.2 (A:127-369) Chlormuconate cycloisomerase {Pseudomonas sp. p51 [TaxId: 65067]} Back     information, alignment and structure
>d1ps9a1 c.1.4.1 (A:1-330) 2,4-dienoyl-CoA reductase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1twda_ c.1.30.1 (A:) Copper homeostasis protein CutC {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1xxxa1 c.1.10.1 (A:5-300) Dihydrodipicolinate synthase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1km4a_ c.1.2.3 (A:) Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1ykwa1 c.1.14.1 (A:146-428) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Chlorobium tepidum [TaxId: 1097]} Back     information, alignment and structure
>d1zfja1 c.1.5.1 (A:2-94,A:221-492) Inosine monophosphate dehydrogenase (IMPDH) {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1hl2a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1m3ua_ c.1.12.8 (A:) Ketopantoate hydroxymethyltransferase PanB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1eixa_ c.1.2.3 (A:) Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1o66a_ c.1.12.8 (A:) Ketopantoate hydroxymethyltransferase PanB {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d2a6na1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qopa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1qo2a_ c.1.2.1 (A:) Phosphoribosylformimino-5-aminoimidazole carboxamide ribotite isomerase HisA {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1w3ia_ c.1.10.1 (A:) 2-keto-3-deoxy gluconate aldolase Eda {Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tzza1 c.1.11.2 (A:1146-1392) Hypothetical protein Bll6730 {Bradyrhizobium japonicum [TaxId: 375]} Back     information, alignment and structure
>d1muca1 c.1.11.2 (A:131-372) Muconate-lactonizing enzyme {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1geha1 c.1.14.1 (A:137-443) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Archaeon Thermococcus kodakaraensis [TaxId: 311400]} Back     information, alignment and structure
>d1wdda1 c.1.14.1 (A:151-475) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rice (Oryza sativa) [TaxId: 4530]} Back     information, alignment and structure
>d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Back     information, alignment and structure
>d1a53a_ c.1.2.4 (A:) Indole-3-glycerophosphate synthase, IPGS {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1yxya1 c.1.2.5 (A:4-233) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Streptococcus pyogenes [TaxId: 1314]} Back     information, alignment and structure
>d1gvfa_ c.1.10.2 (A:) Tagatose-1,6-bisphosphate aldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1s2wa_ c.1.12.7 (A:) Phosphoenolpyruvate mutase {Blue mussel (Mytilus edulis) [TaxId: 6550]} Back     information, alignment and structure
>d2gl5a1 c.1.11.2 (A:123-400) Putative dehydratase protein STM2273 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1rd5a_ c.1.2.4 (A:) Trp synthase alpha-subunit {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d1o5ka_ c.1.10.1 (A:) Dihydrodipicolinate synthase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1djqa1 c.1.4.1 (A:1-340) Trimethylamine dehydrogenase, N-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} Back     information, alignment and structure
>d1wa3a1 c.1.10.1 (A:2-203) KDPG aldolase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1to3a_ c.1.10.1 (A:) Putative aldolase YihT {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1piia1 c.1.2.4 (A:255-452) N-(5'phosphoribosyl)antranilate isomerase, PRAI {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sjda1 c.1.11.2 (A:126-367) N-acylamino acid racemase {Amycolatopsis sp. [TaxId: 37632]} Back     information, alignment and structure
>d1jpma1 c.1.11.2 (A:126-359) L-Ala-D/L-Glu epimerase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ojxa_ c.1.10.1 (A:) Archaeal fructose 1,6-bisphosphate aldolase {Archaeon Thermoproteus tenax [TaxId: 2271]} Back     information, alignment and structure
>d1vyra_ c.1.4.1 (A:) Pentaerythritol tetranirate reductase {Enterobacter cloacae [TaxId: 550]} Back     information, alignment and structure
>d1oy0a_ c.1.12.8 (A:) Ketopantoate hydroxymethyltransferase PanB {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d2d69a1 c.1.14.1 (A:134-424) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1vhna_ c.1.4.1 (A:) Putative flavin oxidoreducatase TM0096 {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1dbta_ c.1.2.3 (A:) Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1muma_ c.1.12.7 (A:) 2-methylisocitrate lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wufa1 c.1.11.2 (A:1127-1370) N-acylamino acid racemase {Listeria innocua [TaxId: 1642]} Back     information, alignment and structure
>d1qpoa1 c.1.17.1 (A:117-285) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1piia2 c.1.2.4 (A:1-254) Indole-3-glycerophosphate synthase, IPGS {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gqna_ c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase {Salmonella typhi [TaxId: 90370]} Back     information, alignment and structure
>d1y0ea_ c.1.2.5 (A:) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1xkya1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Bacillus anthracis [TaxId: 1392]} Back     information, alignment and structure
>d1xxxa1 c.1.10.1 (A:5-300) Dihydrodipicolinate synthase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1yeya1 c.1.11.2 (A:184-435) RTS beta protein {Xanthomonas campestris pv. campestris [TaxId: 340]} Back     information, alignment and structure
>d1f6ya_ c.1.21.2 (A:) Methyltetrahydrofolate: corrinoid/iron-sulfur protein methyltransferase MetR {Moorella thermoacetica [TaxId: 1525]} Back     information, alignment and structure
>d1m5wa_ c.1.24.1 (A:) Pyridoxine 5'-phosphate synthase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2p10a1 c.1.12.9 (A:8-204) Uncharacterized protein Mll9387 {Mesorhizobium loti [TaxId: 381]} Back     information, alignment and structure
>d1jr1a1 c.1.5.1 (A:17-112,A:233-514) Inosine monophosphate dehydrogenase (IMPDH) {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} Back     information, alignment and structure
>d1rvga_ c.1.10.2 (A:) Fructose-bisphosphate aldolase (FBP aldolase) {Thermus aquaticus [TaxId: 271]} Back     information, alignment and structure
>d1o4ua1 c.1.17.1 (A:104-273) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1pvna1 c.1.5.1 (A:2-99,A:231-494) Inosine monophosphate dehydrogenase (IMPDH) {Tritrichomonas foetus [TaxId: 5724]} Back     information, alignment and structure
>d1vc4a_ c.1.2.4 (A:) Indole-3-glycerophosphate synthase, IPGS {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1i4na_ c.1.2.4 (A:) Indole-3-glycerophosphate synthase, IPGS {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vpxa_ c.1.10.1 (A:) Decameric fructose-6-phosphate aldolase/transaldolase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1qapa1 c.1.17.1 (A:130-296) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1p0ka_ c.1.4.1 (A:) Isopentenyl-diphosphate delta-isomerase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d2a6na1 c.1.10.1 (A:1-292) Dihydrodipicolinate synthase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1gtea2 c.1.4.1 (A:533-844) Dihydropyrimidine dehydrogenase, domain 4 {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1vrda1 c.1.5.1 (A:1-85,A:213-457) Inosine monophosphate dehydrogenase (IMPDH) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1dqwa_ c.1.2.3 (A:) Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2mnra1 c.1.11.2 (A:133-359) Mandelate racemase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1v5xa_ c.1.2.4 (A:) N-(5'phosphoribosyl)antranilate isomerase, PRAI {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1f74a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d3bofa1 c.1.21.2 (A:301-560) Cobalamin-dependent methionine synthase MetH, C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d7reqa2 c.23.6.1 (A:561-728) Methylmalonyl-CoA mutase alpha subunit, C-terminal domain {Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]} Back     information, alignment and structure
>d1hl2a_ c.1.10.1 (A:) N-acetylneuraminate lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sfla_ c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1ub3a_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1bwva1 c.1.14.1 (A:150-478) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Galdieria partita [TaxId: 83374]} Back     information, alignment and structure
>d1wuea1 c.1.11.2 (A:1127-1367) N-acylamino acid racemase {Enterococcus faecalis [TaxId: 1351]} Back     information, alignment and structure
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2ffca1 c.1.2.3 (A:20-351) Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) {Plasmodium vivax [TaxId: 5855]} Back     information, alignment and structure
>d2gdqa1 c.1.11.2 (A:119-374) Hypothetical protein YitF {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1ep3a_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Lactococcus lactis, isozyme B [TaxId: 1358]} Back     information, alignment and structure
>d1gqna_ c.1.10.1 (A:) Type I 3-dehydroquinate dehydratase {Salmonella typhi [TaxId: 90370]} Back     information, alignment and structure
>d1r0ma1 c.1.11.2 (A:133-375) N-acylamino acid racemase {Deinococcus radiodurans [TaxId: 1299]} Back     information, alignment and structure
>d1mzha_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1o0ya_ c.1.10.1 (A:) Deoxyribose-phosphate aldolase DeoC {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d3bofa2 c.1.26.1 (A:1-300) Cobalamin-dependent methionine synthase MetH, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1dxea_ c.1.12.5 (A:) 2-dehydro-3-deoxy-galactarate aldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1l6wa_ c.1.10.1 (A:) Decameric fructose-6-phosphate aldolase/transaldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1lt7a_ c.1.26.1 (A:) Betaine-homocysteine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wx0a1 c.1.10.1 (A:1-211) Decameric fructose-6-phosphate aldolase/transaldolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2g50a2 c.1.12.1 (A:12-115,A:218-395) Pyruvate kinase, N-terminal domain {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1twda_ c.1.30.1 (A:) Copper homeostasis protein CutC {Shigella flexneri [TaxId: 623]} Back     information, alignment and structure
>d1w3ia_ c.1.10.1 (A:) 2-keto-3-deoxy gluconate aldolase Eda {Sulfolobus solfataricus [TaxId: 2287]} Back     information, alignment and structure
>d1r30a_ c.1.28.1 (A:) Biotin synthase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1a3xa2 c.1.12.1 (A:1-87,A:189-366) Pyruvate kinase, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2p10a1 c.1.12.9 (A:8-204) Uncharacterized protein Mll9387 {Mesorhizobium loti [TaxId: 381]} Back     information, alignment and structure
>d1qpoa1 c.1.17.1 (A:117-285) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1icpa_ c.1.4.1 (A:) 12-oxophytodienoate reductase (OPR, OYE homolog) {Tomato (Lycopersicon esculentum), OPR1 [TaxId: 4081]} Back     information, alignment and structure
>d1vr6a1 c.1.10.4 (A:1-338) 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1l6sa_ c.1.10.3 (A:) 5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vpxa_ c.1.10.1 (A:) Decameric fructose-6-phosphate aldolase/transaldolase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2tpsa_ c.1.3.1 (A:) Thiamin phosphate synthase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1dxea_ c.1.12.5 (A:) 2-dehydro-3-deoxy-galactarate aldolase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1q6oa_ c.1.2.3 (A:) 3-keto-L-gulonate 6-phosphate decarboxylase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1geqa_ c.1.2.4 (A:) Trp synthase alpha-subunit {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1nvma2 c.1.10.5 (A:2-290) 4-hydroxy-2-oxovalerate aldolase DmpG, catalytic domain {Pseudomonas sp. [TaxId: 306]} Back     information, alignment and structure
>d1gwja_ c.1.4.1 (A:) Morphinone reductase {Pseudomonas putida [TaxId: 303]} Back     information, alignment and structure
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]} Back     information, alignment and structure
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1vcva1 c.1.10.1 (A:1-226) Deoxyribose-phosphate aldolase DeoC {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1e0ta2 c.1.12.1 (A:1-69,A:168-344) Pyruvate kinase, N-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2q8za1 c.1.2.3 (A:1-323) Protozoan orotidine monophosphate decarboxylase {Plasmodium falciparum (isolate 3D7) (Plasmodium falciparum 3D7) [TaxId: 36329]} Back     information, alignment and structure
>d1ajza_ c.1.21.1 (A:) Dihydropteroate synthetase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1wb0a1 c.1.8.5 (A:22-266,A:337-388) Chitotriosidase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ojxa_ c.1.10.1 (A:) Archaeal fructose 1,6-bisphosphate aldolase {Archaeon Thermoproteus tenax [TaxId: 2271]} Back     information, alignment and structure
>d1jdfa1 c.1.11.2 (A:138-446) D-glucarate dehydratase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1vlia2 c.1.10.6 (A:2-296) Spore coat polysaccharide biosynthesis protein SpsE, N-terminal domain {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1nsja_ c.1.2.4 (A:) N-(5'phosphoribosyl)antranilate isomerase, PRAI {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1vqta1 c.1.2.3 (A:1-198) Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1pkla2 c.1.12.1 (A:1-87,A:187-357) Pyruvate kinase, N-terminal domain {Leishmania mexicana [TaxId: 5665]} Back     information, alignment and structure
>d1o66a_ c.1.12.8 (A:) Ketopantoate hydroxymethyltransferase PanB {Neisseria meningitidis [TaxId: 487]} Back     information, alignment and structure
>d5ruba1 c.1.14.1 (A:138-457) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Rhodospirillum rubrum [TaxId: 1085]} Back     information, alignment and structure
>d2cu0a1 c.1.5.1 (A:3-96,A:207-480) Inosine monophosphate dehydrogenase (IMPDH) {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1o4ua1 c.1.17.1 (A:104-273) Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), C-terminal domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure