Citrus Sinensis ID: 016508

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------39
MWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGINRSSC
cccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHccccccccHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHcccccHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHcccccHHHHHHccHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccc
cccccHccHHHHHHHHHHHHHcHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHcEEcccccccccccccccHHHHHHHHcccEEcccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEccHHHcEcccccccccEcHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEcHHHHHHccHcccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHccHHHHHHHcccccHHHHHHHcHHHHHccccccccccHHHHHHHHHHHHHHHHHHHccc
MWRTDREDVHMNIEAALTDIigepakklhtarsrndqvLTDFRLWCRDAIDTIVRSIQRLQVALVKLALkneglivpgythlqRAQPVLLQHLLLAYVEQLERDAGRLQDcrvrmnfcplgacalagtglpidrfmTAEAleftapmrnsidavsdRDFVLEFLSANSIIAIHLSRLGEEWVLWASeefgfitpsdsvstgssimpqkknpdpmelvrgksaRVIGDLVTLLTLckglplaynrdlqedkeptfdSVKTIVGMLEVSAEFAQNITFNVERIKKalpagyldatTLADYLvnkqvpfrtshdiVGKAVALCVSkecqlqdlsldemrslnpvfdkdvyEYLGVENAIRKFssfgstgsacVTEQLHSWVAKlginrssc
mwrtdredvHMNIEAALTDIIGEPAKKlhtarsrndqvltdFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPlaynrdlqedkePTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSwvaklginrssc
MWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGINRSSC
***********NIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFIT***************************SARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGI*****
MWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGI*****
********VHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSD**************PDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGINRSSC
*WRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGIN****
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oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLGINRSSC
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query388 2.2.26 [Sep-21-2011]
Q5FPK5481 Argininosuccinate lyase O yes no 0.969 0.781 0.551 1e-115
Q7VEK0462 Argininosuccinate lyase O yes no 0.956 0.803 0.548 1e-113
C1D665461 Argininosuccinate lyase O yes no 0.981 0.826 0.535 1e-111
Q3JDS2467 Argininosuccinate lyase O yes no 0.979 0.813 0.539 1e-111
Q6AR60464 Argininosuccinate lyase O yes no 0.961 0.803 0.512 1e-110
Q2LT96472 Argininosuccinate lyase O yes no 0.948 0.779 0.527 1e-109
A9W714463 Argininosuccinate lyase O yes no 0.984 0.825 0.503 1e-109
A3PMB7471 Argininosuccinate lyase O yes no 0.981 0.808 0.513 1e-109
Q8DLW0463 Argininosuccinate lyase O yes no 0.948 0.794 0.531 1e-109
B1ZKR9463 Argininosuccinate lyase O yes no 0.984 0.825 0.501 1e-109
>sp|Q5FPK5|ARLY_GLUOX Argininosuccinate lyase OS=Gluconobacter oxydans (strain 621H) GN=argH PE=3 SV=1 Back     alignment and function desciption
 Score =  416 bits (1069), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 208/377 (55%), Positives = 259/377 (68%), Gaps = 1/377 (0%)

Query: 7   EDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVK 66
           ED+HMNIEA L++ IGE  K+LHTARSRNDQV TDFRLW RDAID +      L  +L  
Sbjct: 102 EDIHMNIEARLSERIGEAGKRLHTARSRNDQVATDFRLWVRDAIDGLQEQTASLMRSLAT 161

Query: 67  LALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALA 126
            AL++    +PG+THLQ AQPV   H LLAYVE L RD GRL+D R R+N CPLG+ ALA
Sbjct: 162 RALEHAATPMPGFTHLQVAQPVTFGHHLLAYVEMLSRDRGRLRDARARLNECPLGSAALA 221

Query: 127 GTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEWVLWAS 186
           GT  PIDR MTA AL+F  P  NS+DAVSDRDF LEFLSA S+ A+HLSRL EE V+WAS
Sbjct: 222 GTSFPIDRRMTAAALDFDRPTANSLDAVSDRDFALEFLSALSLQAMHLSRLAEEIVMWAS 281

Query: 187 EEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYNRDL 246
             FGFIT SD+ +TGSSIMPQK+NPD  ELVR K  R++GD V LLT+ KGLPLAY +D 
Sbjct: 282 APFGFITLSDAFTTGSSIMPQKRNPDAAELVRAKIGRIMGDFVGLLTVMKGLPLAYAKDT 341

Query: 247 QEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNK-QVP 305
           QEDKEP FD+ + +   L       +++  N  R++     G+  AT LAD+LV + +VP
Sbjct: 342 QEDKEPVFDATEAMTLSLAAMDGMIRDLKANTTRMRAVAGMGFSTATDLADWLVRELRVP 401

Query: 306 FRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGST 365
           FRT+H + G+ V +   K C L DLSL+EM+S+ P  +  V++ L VE ++   +S G T
Sbjct: 402 FRTAHHVTGRLVGMAEQKGCDLADLSLEEMQSVEPQINAGVFDVLTVEASLASRTSEGGT 461

Query: 366 GSACVTEQLHSWVAKLG 382
             A V  Q  SW+AKLG
Sbjct: 462 APANVKHQAESWLAKLG 478

Gluconobacter oxydans (strain 621H) (taxid: 290633)
EC: 4EC: .EC: 3EC: .EC: 2EC: .EC: 1
>sp|Q7VEK0|ARLY_PROMA Argininosuccinate lyase OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|C1D665|ARLY_LARHH Argininosuccinate lyase OS=Laribacter hongkongensis (strain HLHK9) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|Q3JDS2|ARLY_NITOC Argininosuccinate lyase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|Q6AR60|ARLY_DESPS Argininosuccinate lyase OS=Desulfotalea psychrophila (strain LSv54 / DSM 12343) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|Q2LT96|ARLY_SYNAS Argininosuccinate lyase OS=Syntrophus aciditrophicus (strain SB) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|A9W714|ARLY_METEP Argininosuccinate lyase OS=Methylobacterium extorquens (strain PA1) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|A3PMB7|ARLY_RHOS1 Argininosuccinate lyase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|Q8DLW0|ARLY_THEEB Argininosuccinate lyase OS=Thermosynechococcus elongatus (strain BP-1) GN=argH PE=3 SV=1 Back     alignment and function description
>sp|B1ZKR9|ARLY_METPB Argininosuccinate lyase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=argH PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query388
255545970481 argininosuccinate lyase, putative [Ricin 0.994 0.802 0.873 0.0
225459083 525 PREDICTED: argininosuccinate lyase [Viti 0.989 0.731 0.869 0.0
302142068478 unnamed protein product [Vitis vinifera] 0.989 0.803 0.869 0.0
449436950 523 PREDICTED: argininosuccinate lyase-like 0.989 0.734 0.859 0.0
357465245472 Argininosuccinate lyase [Medicago trunca 0.984 0.809 0.858 0.0
356515726 516 PREDICTED: argininosuccinate lyase-like 0.979 0.736 0.865 0.0
356508027 512 PREDICTED: argininosuccinate lyase-like 0.979 0.742 0.865 0.0
388511499 517 unknown [Medicago truncatula] 0.984 0.738 0.850 0.0
449469785487 PREDICTED: argininosuccinate lyase-like 0.987 0.786 0.822 0.0
224067080461 predicted protein [Populus trichocarpa] 0.981 0.826 0.835 0.0
>gi|255545970|ref|XP_002514045.1| argininosuccinate lyase, putative [Ricinus communis] gi|223547131|gb|EEF48628.1| argininosuccinate lyase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  709 bits (1830), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/386 (87%), Positives = 360/386 (93%)

Query: 1   MWRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRL 60
           +WRTDREDVHMNIEAALTD+IGEPAKKLHTARSRNDQVLTDFRLWCR+AID I  SI+ L
Sbjct: 93  VWRTDREDVHMNIEAALTDMIGEPAKKLHTARSRNDQVLTDFRLWCRNAIDKIAVSIKHL 152

Query: 61  QVALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPL 120
           QVALV LAL NEGLIVPGYTHLQRAQPVLL HLLLAYVEQLERDA RL DCRVR+NF PL
Sbjct: 153 QVALVTLALDNEGLIVPGYTHLQRAQPVLLSHLLLAYVEQLERDASRLHDCRVRLNFSPL 212

Query: 121 GACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEE 180
           GACALAGTGLPIDRFMT++AL FTAPMRNSIDAVSDRDFVLEFLSANSI A+HLSRLGEE
Sbjct: 213 GACALAGTGLPIDRFMTSDALGFTAPMRNSIDAVSDRDFVLEFLSANSITAVHLSRLGEE 272

Query: 181 WVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPL 240
           WVLWASEEFGFI PSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPL
Sbjct: 273 WVLWASEEFGFIIPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPL 332

Query: 241 AYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLV 300
           AYNRDLQEDKEP FDSVKTI+GMLEVSAEFAQNITFN  +I+KALPAGYLDATTLADYLV
Sbjct: 333 AYNRDLQEDKEPVFDSVKTIIGMLEVSAEFAQNITFNSAKIQKALPAGYLDATTLADYLV 392

Query: 301 NKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFS 360
            K +PFRTSHDIVG++VALCVSK CQLQDLSLD+MRS++PVF +DVYEYLGVENA++KF 
Sbjct: 393 KKGMPFRTSHDIVGRSVALCVSKNCQLQDLSLDDMRSISPVFQEDVYEYLGVENAVKKFV 452

Query: 361 SFGSTGSACVTEQLHSWVAKLGINRS 386
           S+GSTGSACV +QL  WV KL I+RS
Sbjct: 453 SYGSTGSACVADQLDYWVTKLEISRS 478

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225459083|ref|XP_002283809.1| PREDICTED: argininosuccinate lyase [Vitis vinifera] Back     alignment and taxonomy information
>gi|302142068|emb|CBI19271.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449436950|ref|XP_004136255.1| PREDICTED: argininosuccinate lyase-like [Cucumis sativus] gi|449526427|ref|XP_004170215.1| PREDICTED: argininosuccinate lyase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|357465245|ref|XP_003602904.1| Argininosuccinate lyase [Medicago truncatula] gi|355491952|gb|AES73155.1| Argininosuccinate lyase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356515726|ref|XP_003526549.1| PREDICTED: argininosuccinate lyase-like [Glycine max] Back     alignment and taxonomy information
>gi|356508027|ref|XP_003522764.1| PREDICTED: argininosuccinate lyase-like [Glycine max] Back     alignment and taxonomy information
>gi|388511499|gb|AFK43811.1| unknown [Medicago truncatula] Back     alignment and taxonomy information
>gi|449469785|ref|XP_004152599.1| PREDICTED: argininosuccinate lyase-like [Cucumis sativus] gi|449524625|ref|XP_004169322.1| PREDICTED: argininosuccinate lyase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224067080|ref|XP_002302345.1| predicted protein [Populus trichocarpa] gi|222844071|gb|EEE81618.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query388
TAIR|locus:2183825517 AT5G10920 [Arabidopsis thalian 0.984 0.738 0.816 5.2e-168
TIGR_CMR|GSU_0156458 GSU_0156 "argininosuccinate ly 0.963 0.816 0.497 3.3e-95
TIGR_CMR|SPO_0332463 SPO_0332 "argininosuccinate ly 0.963 0.807 0.52 4.2e-95
TIGR_CMR|BA_4879462 BA_4879 "argininosuccinate lya 0.932 0.783 0.519 5.3e-95
TIGR_CMR|ECH_0937470 ECH_0937 "argininosuccinate ly 0.956 0.789 0.505 7.8e-94
TIGR_CMR|CHY_2259456 CHY_2259 "argininosuccinate ly 0.953 0.811 0.505 1.3e-91
TIGR_CMR|DET_1261461 DET_1261 "argininosuccinate ly 0.961 0.809 0.497 1.9e-90
UNIPROTKB|P11447457 argH "argininosuccinate lyase" 0.976 0.829 0.474 2.3e-87
UNIPROTKB|Q9KNT9458 argH "Argininosuccinate lyase" 0.974 0.825 0.462 1.6e-86
TIGR_CMR|VC_2641458 VC_2641 "argininosuccinate lya 0.974 0.825 0.462 1.6e-86
TAIR|locus:2183825 AT5G10920 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1634 (580.3 bits), Expect = 5.2e-168, P = 5.2e-168
 Identities = 312/382 (81%), Positives = 344/382 (90%)

Query:     2 WRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQ 61
             WRTDREDVHMNIEAALTD+IGEPAKKLHTARSRNDQV TDFRLWCRDAIDTI+  I+ LQ
Sbjct:   133 WRTDREDVHMNIEAALTDLIGEPAKKLHTARSRNDQVATDFRLWCRDAIDTIIVKIRNLQ 192

Query:    62 VALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLG 121
              ALV+LALKNE LIVPGYTHLQRAQPVLL H+LL +VEQLERDAGR  DCR R+NF PLG
Sbjct:   193 RALVELALKNEALIVPGYTHLQRAQPVLLPHVLLTFVEQLERDAGRYVDCRARLNFSPLG 252

Query:   122 ACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEW 181
             ACALAGTGLPIDRFMTA AL FT PMRNSIDAVSDRDFVLEFL  N+   IHLSRLGEEW
Sbjct:   253 ACALAGTGLPIDRFMTANALGFTEPMRNSIDAVSDRDFVLEFLYTNANTGIHLSRLGEEW 312

Query:   182 VLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLA 241
             VLWASEEFGF+TPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVT+LTLCKGLPLA
Sbjct:   313 VLWASEEFGFMTPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTVLTLCKGLPLA 372

Query:   242 YNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVN 301
             YNRD QEDKEP FDS KTI+GM++VSAEFAQN+TFN +RIKK+LPAG+LDATTLADYLV 
Sbjct:   373 YNRDFQEDKEPMFDSTKTIMGMIDVSAEFAQNVTFNEDRIKKSLPAGHLDATTLADYLVK 432

Query:   302 KQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSS 361
             K +PFR+SHDIVGK V +CVSK C+LQ+LSL+EM+ L+PVF++DV+ +LGVEN++ KFSS
Sbjct:   433 KGMPFRSSHDIVGKLVGVCVSKGCELQNLSLEEMKKLSPVFEEDVFGFLGVENSVNKFSS 492

Query:   362 FGSTGSACVTEQLHSWVAKLGI 383
             +GSTGS CV EQL  WV KL I
Sbjct:   493 YGSTGSNCVAEQLGYWVNKLNI 514
GO:0003824 "catalytic activity" evidence=IEA
GO:0004056 "argininosuccinate lyase activity" evidence=IEA;ISS
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0042450 "arginine biosynthetic process via ornithine" evidence=IEA
GO:0009570 "chloroplast stroma" evidence=IDA
GO:0006164 "purine nucleotide biosynthetic process" evidence=RCA
GO:0009165 "nucleotide biosynthetic process" evidence=RCA
TIGR_CMR|GSU_0156 GSU_0156 "argininosuccinate lyase" [Geobacter sulfurreducens PCA (taxid:243231)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_0332 SPO_0332 "argininosuccinate lyase" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|BA_4879 BA_4879 "argininosuccinate lyase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
TIGR_CMR|ECH_0937 ECH_0937 "argininosuccinate lyase" [Ehrlichia chaffeensis str. Arkansas (taxid:205920)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_2259 CHY_2259 "argininosuccinate lyase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
TIGR_CMR|DET_1261 DET_1261 "argininosuccinate lyase" [Dehalococcoides ethenogenes 195 (taxid:243164)] Back     alignment and assigned GO terms
UNIPROTKB|P11447 argH "argininosuccinate lyase" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KNT9 argH "Argininosuccinate lyase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_2641 VC_2641 "argininosuccinate lyase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
A9B9L0ARLY_PROM44, ., 3, ., 2, ., 10.51880.95610.8030yesno
Q7VEK0ARLY_PROMA4, ., 3, ., 2, ., 10.54830.95610.8030yesno
Q46I50ARLY_PROMT4, ., 3, ., 2, ., 10.52390.96640.8099yesno
Q81KV8ARLY_BACAN4, ., 3, ., 2, ., 10.51500.94070.7900yesno
Q8DLW0ARLY_THEEB4, ., 3, ., 2, ., 10.53110.94840.7948yesno
B7KW75ARLY_METC44, ., 3, ., 2, ., 10.50130.98450.8250yesno
Q1GXA9ARLY_METFK4, ., 3, ., 2, ., 10.52490.98190.8141yesno
C1D665ARLY_LARHH4, ., 3, ., 2, ., 10.53540.98190.8264yesno
B0VDE4ARLY_ACIBY4, ., 3, ., 2, ., 10.55340.93810.7631yesno
A1B3M0ARLY_PARDP4, ., 3, ., 2, ., 10.51590.96640.7995yesno
A2BZB5ARLY_PROM14, ., 3, ., 2, ., 10.52390.96640.8099yesno
B8GSV2ARLY_THISH4, ., 3, ., 2, ., 10.52100.97930.8137yesno
A9IZG7ARLY_BART14, ., 3, ., 2, ., 10.51590.96640.8047yesno
A3PMB7ARLY_RHOS14, ., 3, ., 2, ., 10.51300.98190.8089yesno
A8LL46ARLY_DINSH4, ., 3, ., 2, ., 10.51720.96900.8120yesno
Q3JDS2ARLY_NITOC4, ., 3, ., 2, ., 10.53940.97930.8137yesno
A7GTR4ARLY_BACCN4, ., 3, ., 2, ., 10.50670.96130.8073yesno
Q6AR60ARLY_DESPS4, ., 3, ., 2, ., 10.51200.96130.8038yesno
A9VKE0ARLY_BACWK4, ., 3, ., 2, ., 10.51230.94070.7900yesno
B1ZKR9ARLY_METPB4, ., 3, ., 2, ., 10.50130.98450.8250yesno
C3L913ARLY_BACAC4, ., 3, ., 2, ., 10.51500.94070.7900yesno
Q817C7ARLY_BACCR4, ., 3, ., 2, ., 10.51230.94070.7900yesno
Q5FPK5ARLY_GLUOX4, ., 3, ., 2, ., 10.55170.96900.7817yesno
B7H6Y4ARLY_BACC44, ., 3, ., 2, ., 10.51500.94070.7900yesno
A4WVB9ARLY_RHOS54, ., 3, ., 2, ., 10.51040.98190.8089yesno
Q3IZY2ARLY_RHOS44, ., 3, ., 2, ., 10.51300.98190.8089yesno
Q28V48ARLY_JANSC4, ., 3, ., 2, ., 10.51300.98190.8004yesno
A1UQY9ARLY_BARBK4, ., 3, ., 2, ., 10.51590.96640.8047yesno
Q72GZ4ARLY_THET24, ., 3, ., 2, ., 10.51940.98710.8290yesno
C3PB96ARLY_BACAA4, ., 3, ., 2, ., 10.51500.94070.7900yesno
Q633G5ARLY_BACCZ4, ., 3, ., 2, ., 10.51230.94070.7900yesno
Q2LT96ARLY_SYNAS4, ., 3, ., 2, ., 10.52710.94840.7796yesno
B0CIY4ARLY_BRUSI4, ., 3, ., 2, ., 10.50260.96640.8047yesno
B2I1W9ARLY_ACIBC4, ., 3, ., 2, ., 10.55060.93810.7631yesno
B7IK28ARLY_BACC24, ., 3, ., 2, ., 10.51500.94070.7900yesno
Q72ZA4ARLY_BACC14, ., 3, ., 2, ., 10.51230.94070.7900yesno
Q5SLL0ARLY_THET84, ., 3, ., 2, ., 10.51680.98710.8290yesno
Q2RXE3ARLY_RHORT4, ., 3, ., 2, ., 10.53330.92520.7510yesno
A9W714ARLY_METEP4, ., 3, ., 2, ., 10.50390.98450.8250yesno
A2BTV0ARLY_PROM54, ., 3, ., 2, ., 10.51060.96640.8169yesno
B0VMC7ARLY_ACIBS4, ., 3, ., 2, ., 10.55060.93810.7631yesno
A9M968ARLY_BRUC24, ., 3, ., 2, ., 10.50260.96640.8047yesno
Q8FYA4ARLY_BRUSU4, ., 3, ., 2, ., 10.50260.96640.8047yesno
C5D678ARLY_GEOSW4, ., 3, ., 2, ., 10.52980.94840.8017yesno
B7I338ARLY_ACIB54, ., 3, ., 2, ., 10.55340.93810.7631yesno
Q98G36ARLY1_RHILO4, ., 3, ., 2, ., 10.49600.97930.8154yesno
B7H1L9ARLY_ACIB34, ., 3, ., 2, ., 10.55340.93810.7631yesno
Q609I6ARLY_METCA4, ., 3, ., 2, ., 10.53920.95100.7935yesno
B7HRS6ARLY_BACC74, ., 3, ., 2, ., 10.51230.94070.7883yesno
A5D4Y2ARLY_PELTS4, ., 3, ., 2, ., 10.51570.97930.8260yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.3.2.10.914
3rd Layer4.3.20.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00015101001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (525 aa)
(Vitis vinifera)
Predicted Functional Partners:
GSVIVG00017913001
SubName- Full=Chromosome chr17 scaffold_16, whole genome shotgun sequence; (430 aa)
• •• •• 0.999
GSVIVG00032389001
SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (351 aa)
• •• •• 0.990
GSVIVG00014587001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (261 aa)
• ••  • 0.986
GSVIVG00024476001
SubName- Full=Chromosome chr6 scaffold_3, whole genome shotgun sequence; (749 aa)
•  • •• 0.986
GSVIVG00036526001
RecName- Full=N-acetyl-gamma-glutamyl-phosphate reductase; EC=1.2.1.38; (398 aa)
• ••  • 0.984
GSVIVG00023053001
SubName- Full=Chromosome chr8 scaffold_29, whole genome shotgun sequence; (430 aa)
• ••  • 0.982
GSVIVG00026399001
SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (348 aa)
     •• 0.974
GSVIVG00034896001
SubName- Full=Chromosome chr4 scaffold_73, whole genome shotgun sequence; (407 aa)
•  •  • 0.969
ADC
RecName- Full=Arginine decarboxylase; EC=4.1.1.19; (713 aa)
     •• 0.964
GSVIVG00029948001
SubName- Full=Chromosome undetermined scaffold_51, whole genome shotgun sequence; (562 aa)
     •• 0.908

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query388
PLN02646474 PLN02646, PLN02646, argininosuccinate lyase 0.0
PRK00855459 PRK00855, PRK00855, argininosuccinate lyase; Provi 0.0
cd01359435 cd01359, Argininosuccinate_lyase, Argininosuccinat 0.0
COG0165459 COG0165, ArgH, Argininosuccinate lyase [Amino acid 0.0
TIGR00838455 TIGR00838, argH, argininosuccinate lyase 1e-174
PRK04833455 PRK04833, PRK04833, argininosuccinate lyase; Provi 1e-153
PRK12308 614 PRK12308, PRK12308, bifunctional argininosuccinate 1e-149
cd01334325 cd01334, Lyase_I, Lyase class I family; a group of 1e-112
pfam00206312 pfam00206, Lyase_1, Lyase 6e-68
cd01594231 cd01594, Lyase_I_like, Lyase class I_like superfam 1e-57
PRK02186887 PRK02186, PRK02186, argininosuccinate lyase; Provi 3e-57
PRK06705502 PRK06705, PRK06705, argininosuccinate lyase; Provi 9e-39
PRK06389434 PRK06389, PRK06389, argininosuccinate lyase; Provi 4e-25
COG0015438 COG0015, PurB, Adenylosuccinate lyase [Nucleotide 9e-21
cd01595381 cd01595, Adenylsuccinate_lyase_like, Adenylsuccina 1e-20
PRK13353473 PRK13353, PRK13353, aspartate ammonia-lyase; Provi 3e-17
cd01597437 cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muco 3e-17
TIGR00928435 TIGR00928, purB, adenylosuccinate lyase 4e-16
cd01360387 cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate 2e-14
COG1027471 COG1027, AspA, Aspartate ammonia-lyase [Amino acid 7e-14
TIGR02426338 TIGR02426, protocat_pcaB, 3-carboxy-cis,cis-mucona 5e-13
cd01357450 cd01357, Aspartase, Aspartase 3e-12
PRK14515479 PRK14515, PRK14515, aspartate ammonia-lyase; Provi 3e-12
TIGR00839468 TIGR00839, aspA, aspartate ammonia-lyase 3e-12
PLN00134458 PLN00134, PLN00134, fumarate hydratase; Provisiona 5e-11
cd01596450 cd01596, Aspartase_like, aspartase (L-aspartate am 6e-11
PRK09053452 PRK09053, PRK09053, 3-carboxy-cis,cis-muconate cyc 3e-09
PRK08540449 PRK08540, PRK08540, adenylosuccinate lyase; Review 7e-09
COG0114462 COG0114, FumC, Fumarase [Energy production and con 8e-09
PRK12273472 PRK12273, aspA, aspartate ammonia-lyase; Provision 9e-09
PRK06390451 PRK06390, PRK06390, adenylosuccinate lyase; Provis 3e-07
TIGR00979458 TIGR00979, fumC_II, fumarate hydratase, class II 1e-06
cd01362455 cd01362, Fumarase_classII, Class II fumarases 2e-05
PRK00485464 PRK00485, fumC, fumarate hydratase; Reviewed 4e-05
PRK12425464 PRK12425, PRK12425, fumarate hydratase; Provisiona 1e-04
PRK08937216 PRK08937, PRK08937, adenylosuccinate lyase; Provis 4e-04
PRK05975351 PRK05975, PRK05975, 3-carboxy-cis,cis-muconate cyc 0.001
PRK07492435 PRK07492, PRK07492, adenylosuccinate lyase; Provis 0.003
>gnl|CDD|215348 PLN02646, PLN02646, argininosuccinate lyase Back     alignment and domain information 
 Score =  741 bits (1916), Expect = 0.0
 Identities = 303/384 (78%), Positives = 333/384 (86%)

Query: 2   WRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQ 61
           WR DREDVHMN EA LT++IGEPAKKLHTARSRNDQV TD RLWCRDAID I + I+ LQ
Sbjct: 91  WRPDREDVHMNNEARLTELIGEPAKKLHTARSRNDQVATDTRLWCRDAIDVIRKRIKTLQ 150

Query: 62  VALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLG 121
           VALV+LA KN  L+VPGYTHLQRAQPVLL H LL++VEQLERDAGRL DCR R+NFCPLG
Sbjct: 151 VALVELAEKNVDLVVPGYTHLQRAQPVLLSHWLLSHVEQLERDAGRLVDCRPRVNFCPLG 210

Query: 122 ACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEW 181
           +CALAGTGLPIDRFMTA+ L FTAPMRNSIDAVSDRDFVLEFL ANSI AIHLSRLGEEW
Sbjct: 211 SCALAGTGLPIDRFMTAKDLGFTAPMRNSIDAVSDRDFVLEFLFANSITAIHLSRLGEEW 270

Query: 182 VLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLA 241
           VLWASEEFGF+TPSD+VSTGSSIMPQKKNPDPMELVRGKSARVIGDLVT+L LCKGLP A
Sbjct: 271 VLWASEEFGFVTPSDAVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTVLALCKGLPTA 330

Query: 242 YNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVN 301
           YNRDLQEDKEP FDSV T+  MLEV+ EFAQNITFN ERIKK+LPAG LDATTLADYLV 
Sbjct: 331 YNRDLQEDKEPLFDSVDTVSDMLEVATEFAQNITFNPERIKKSLPAGMLDATTLADYLVR 390

Query: 302 KQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSS 361
           K VPFR +H IVG AVAL  SK C+L DL+L++++S+NPVF++DVYE LGVEN++ KF S
Sbjct: 391 KGVPFRETHHIVGAAVALAESKGCELSDLTLEDLKSINPVFEEDVYEVLGVENSVEKFDS 450

Query: 362 FGSTGSACVTEQLHSWVAKLGINR 385
           +GSTGS  V EQL  W  KL I  
Sbjct: 451 YGSTGSRSVLEQLEKWRTKLEITS 474

Length = 474
>gnl|CDD|179143 PRK00855, PRK00855, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|176463 cd01359, Argininosuccinate_lyase, Argininosuccinate lyase (argininosuccinase, ASAL) Back     alignment and domain information
>gnl|CDD|223243 COG0165, ArgH, Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|129918 TIGR00838, argH, argininosuccinate lyase Back     alignment and domain information
>gnl|CDD|179883 PRK04833, PRK04833, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|183425 PRK12308, PRK12308, bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional Back     alignment and domain information
>gnl|CDD|176461 cd01334, Lyase_I, Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions Back     alignment and domain information
>gnl|CDD|215787 pfam00206, Lyase_1, Lyase Back     alignment and domain information
>gnl|CDD|176466 cd01594, Lyase_I_like, Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions Back     alignment and domain information
>gnl|CDD|235010 PRK02186, PRK02186, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|180664 PRK06705, PRK06705, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|235791 PRK06389, PRK06389, argininosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|223094 COG0015, PurB, Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>gnl|CDD|176467 cd01595, Adenylsuccinate_lyase_like, Adenylsuccinate lyase (ASL)_like Back     alignment and domain information
>gnl|CDD|183992 PRK13353, PRK13353, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|176469 cd01597, pCLME, prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like Back     alignment and domain information
>gnl|CDD|233192 TIGR00928, purB, adenylosuccinate lyase Back     alignment and domain information
>gnl|CDD|176464 cd01360, Adenylsuccinate_lyase_1, Adenylsuccinate lyase (ASL)_subgroup 1 Back     alignment and domain information
>gnl|CDD|223958 COG1027, AspA, Aspartate ammonia-lyase [Amino acid transport and metabolism] Back     alignment and domain information
>gnl|CDD|233863 TIGR02426, protocat_pcaB, 3-carboxy-cis,cis-muconate cycloisomerase Back     alignment and domain information
>gnl|CDD|176462 cd01357, Aspartase, Aspartase Back     alignment and domain information
>gnl|CDD|237743 PRK14515, PRK14515, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|213564 TIGR00839, aspA, aspartate ammonia-lyase Back     alignment and domain information
>gnl|CDD|215069 PLN00134, PLN00134, fumarate hydratase; Provisional Back     alignment and domain information
>gnl|CDD|176468 cd01596, Aspartase_like, aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes Back     alignment and domain information
>gnl|CDD|181627 PRK09053, PRK09053, 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>gnl|CDD|236283 PRK08540, PRK08540, adenylosuccinate lyase; Reviewed Back     alignment and domain information
>gnl|CDD|223192 COG0114, FumC, Fumarase [Energy production and conversion] Back     alignment and domain information
>gnl|CDD|237031 PRK12273, aspA, aspartate ammonia-lyase; Provisional Back     alignment and domain information
>gnl|CDD|235792 PRK06390, PRK06390, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|130052 TIGR00979, fumC_II, fumarate hydratase, class II Back     alignment and domain information
>gnl|CDD|176465 cd01362, Fumarase_classII, Class II fumarases Back     alignment and domain information
>gnl|CDD|234779 PRK00485, fumC, fumarate hydratase; Reviewed Back     alignment and domain information
>gnl|CDD|171490 PRK12425, PRK12425, fumarate hydratase; Provisional Back     alignment and domain information
>gnl|CDD|236352 PRK08937, PRK08937, adenylosuccinate lyase; Provisional Back     alignment and domain information
>gnl|CDD|168324 PRK05975, PRK05975, 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>gnl|CDD|181000 PRK07492, PRK07492, adenylosuccinate lyase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 388
COG0165459 ArgH Argininosuccinate lyase [Amino acid transport 100.0
KOG1316464 consensus Argininosuccinate lyase [Amino acid tran 100.0
PLN02646474 argininosuccinate lyase 100.0
PRK04833455 argininosuccinate lyase; Provisional 100.0
TIGR00838455 argH argininosuccinate lyase. This model describes 100.0
PRK06705502 argininosuccinate lyase; Provisional 100.0
PRK00855459 argininosuccinate lyase; Provisional 100.0
cd01359435 Argininosuccinate_lyase Argininosuccinate lyase (a 100.0
PRK12308 614 bifunctional argininosuccinate lyase/N-acetylgluta 100.0
PRK02186887 argininosuccinate lyase; Provisional 100.0
PRK06389434 argininosuccinate lyase; Provisional 100.0
cd01597437 pCLME prokaryotic 3-carboxy-cis,cis-muconate cyclo 100.0
PRK08540449 adenylosuccinate lyase; Reviewed 100.0
PRK08470442 adenylosuccinate lyase; Provisional 100.0
PRK07492435 adenylosuccinate lyase; Provisional 100.0
PRK07380431 adenylosuccinate lyase; Provisional 100.0
PRK06390451 adenylosuccinate lyase; Provisional 100.0
TIGR00928435 purB adenylosuccinate lyase. This family consists 100.0
PRK12273472 aspA aspartate ammonia-lyase; Provisional 100.0
cd01360387 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL 100.0
PRK13353473 aspartate ammonia-lyase; Provisional 100.0
cd01595381 Adenylsuccinate_lyase_like Adenylsuccinate lyase ( 100.0
PRK12425464 fumarate hydratase; Provisional 100.0
cd01357450 Aspartase Aspartase. This subgroup contains Escher 100.0
PRK09053452 3-carboxy-cis,cis-muconate cycloisomerase; Provisi 100.0
cd03302436 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL 100.0
PRK00485464 fumC fumarate hydratase; Reviewed 100.0
PLN00134458 fumarate hydratase; Provisional 100.0
COG0015438 PurB Adenylosuccinate lyase [Nucleotide transport 100.0
TIGR00979458 fumC_II fumarate hydratase, class II. Putative fum 100.0
PRK14515479 aspartate ammonia-lyase; Provisional 100.0
TIGR00839468 aspA aspartate ammonia-lyase. Fumarate hydratase s 100.0
cd01362455 Fumarase_classII Class II fumarases. This subgroup 100.0
cd01334325 Lyase_I Lyase class I family; a group of proteins 100.0
cd01596450 Aspartase_like aspartase (L-aspartate ammonia-lyas 100.0
PRK09285456 adenylosuccinate lyase; Provisional 100.0
TIGR02426338 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisom 100.0
cd01598425 PurB PurB_like adenylosuccinases (adenylsuccinate 100.0
PRK05975351 3-carboxy-cis,cis-muconate cycloisomerase; Provisi 100.0
PLN02848458 adenylosuccinate lyase 100.0
PF00206312 Lyase_1: Lyase; InterPro: IPR022761 This entry rep 100.0
COG1027471 AspA Aspartate ammonia-lyase [Amino acid transport 100.0
COG0114462 FumC Fumarase [Energy production and conversion] 100.0
KOG2700481 consensus Adenylosuccinate lyase [Nucleotide trans 100.0
KOG1317487 consensus Fumarase [Energy production and conversi 100.0
cd01594231 Lyase_I_like Lyase class I_like superfamily: conta 100.0
PRK08937216 adenylosuccinate lyase; Provisional 100.0
PF1469870 ASL_C2: Argininosuccinate lyase C-terminal; PDB: 1 99.52
PF1039781 ADSL_C: Adenylosuccinate lyase C-terminus; InterPr 99.08
PF08328115 ASL_C: Adenylosuccinate lyase C-terminal; InterPro 98.21
PF1041555 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR0 97.55
KOG2700481 consensus Adenylosuccinate lyase [Nucleotide trans 96.45
>COG0165 ArgH Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.1e-102  Score=769.74  Aligned_cols=381  Identities=56%  Similarity=0.827  Sum_probs=375.8

Q ss_pred             CCCCCCchHHHHHHHHHHHhCCCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc
Q 016508            2 WRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTH   81 (388)
Q Consensus         2 ~~~~~ed~~~~~E~~l~~~~g~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh   81 (388)
                      ++|++||||++||++|++++|+.|||+|+||||||+|.|+++||+|+.+..|...+..|+++|+++|++|.+|+||||||
T Consensus        78 ~~~~~EDvH~aiE~~L~~~iG~~ggkLhtgRSRNDQVatd~rL~lr~~~~~l~~~i~~l~~aL~~~Ae~~~~~imPGyTH  157 (459)
T COG0165          78 LDPDDEDVHTAIEARLIERIGDVGGKLHTGRSRNDQVATDLRLWLRDKLLELLELIRILQKALLDLAEEHAETVMPGYTH  157 (459)
T ss_pred             CCCccccHHHHHHHHHHHHHhhhhchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccCCccc
Confidence            68899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHHHHHHhCCCCCCCCchhhhhchHHHH
Q 016508           82 LQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVL  161 (388)
Q Consensus        82 ~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~~  161 (388)
                      +|+|||+|||||+.+|++.|.||++||.+++++++.||||+||++||++|+||+++|++|||+.+..|++|++++||++.
T Consensus       158 lQ~AQPvtf~H~llay~~~l~RD~~Rl~d~~~rvn~sPLGagAlaGt~~~iDR~~tA~lLGF~~~~~Nsldavs~Rdf~l  237 (459)
T COG0165         158 LQRAQPVTFAHHLLAYAEMLARDIERLRDALKRVNVSPLGAGALAGTPFPIDRERTAELLGFDAVTRNSLDAVSDRDFIL  237 (459)
T ss_pred             ccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHhccCCccccccCCCCCCCCHHHHHHHcCCchhhcCchhhhhhHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCccc
Q 016508          162 EFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLA  241 (388)
Q Consensus       162 e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~  241 (388)
                      |+++++++++.+|||||+|+++|+|+|||+|++||++++|||||||||||+.+|.+|++++++.|...+++++++++|++
T Consensus       238 e~l~~~s~~~~~LSRlaedlI~wss~EfgfI~l~D~~sTGSSIMPQKKNPD~~ELiRgk~grv~G~l~~ll~~~k~lPla  317 (459)
T COG0165         238 EFLSAAALIMVHLSRLAEDLILWSSPEFGFIELPDEFSTGSSIMPQKKNPDVLELIRGKAGRVIGALTGLLTIMKGLPLA  317 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHccccCceEeCCcccccccccCCCCCCCcHHHHHHHhhhhhHHHHHHHHHHHhcCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccccccccchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH
Q 016508          242 YNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCV  321 (388)
Q Consensus       242 ~~rd~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~~a~  321 (388)
                      ||||+|+.++++|++++.+..+|..+..++++|+||+++|++.+..++.++|++|++|+++|+|||+||++++++|+.+.
T Consensus       318 YnrDlQedke~lfds~~t~~~~l~~~~~mv~~l~vn~e~~~~a~~~gfs~aTdlAd~lv~kGvPFReAh~ivG~~v~~~~  397 (459)
T COG0165         318 YNRDLQEDKEPLFDSVDTLEDSLRVLAGMVSGLTVNKERMREAAEAGFSTATDLADYLVRKGVPFREAHEIVGEAVRRAE  397 (459)
T ss_pred             ccHHHHhhhHHHHHHHHHHHHHHHHHHHHHccCeeCHHHHHHHhhcccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHHHHHHHHhh
Q 016508          322 SKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLG  382 (388)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~~~~~~~~~  382 (388)
                      +.|+++.++..++++.+.+..++++.++++|+..|+.|.++||++|++|+++++++++.++
T Consensus       398 ~~~~~l~~l~~~~~~~~~~~~~~dv~~~l~~~~~v~~R~~~Ggtap~~v~~~i~~~~~~l~  458 (459)
T COG0165         398 ERGKDLADLSLEELQSISPLIDEDVYEVLTPEESVAKRNSEGGTAPEEVREAIARAKARLA  458 (459)
T ss_pred             HcCCCHHhccHHHHhhhccccchHHHHHhchHHHHHHhhccCCCCHHHHHHHHHHHHHhhc
Confidence            9999999999999988888899999999999999999999999999999999999998875

>KOG1316 consensus Argininosuccinate lyase [Amino acid transport and metabolism] Back     alignment and domain information
>PLN02646 argininosuccinate lyase Back     alignment and domain information
>PRK04833 argininosuccinate lyase; Provisional Back     alignment and domain information
>TIGR00838 argH argininosuccinate lyase Back     alignment and domain information
>PRK06705 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK00855 argininosuccinate lyase; Provisional Back     alignment and domain information
>cd01359 Argininosuccinate_lyase Argininosuccinate lyase (argininosuccinase, ASAL) Back     alignment and domain information
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional Back     alignment and domain information
>PRK02186 argininosuccinate lyase; Provisional Back     alignment and domain information
>PRK06389 argininosuccinate lyase; Provisional Back     alignment and domain information
>cd01597 pCLME prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like Back     alignment and domain information
>PRK08540 adenylosuccinate lyase; Reviewed Back     alignment and domain information
>PRK08470 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK07492 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK07380 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PRK06390 adenylosuccinate lyase; Provisional Back     alignment and domain information
>TIGR00928 purB adenylosuccinate lyase Back     alignment and domain information
>PRK12273 aspA aspartate ammonia-lyase; Provisional Back     alignment and domain information
>cd01360 Adenylsuccinate_lyase_1 Adenylsuccinate lyase (ASL)_subgroup 1 Back     alignment and domain information
>PRK13353 aspartate ammonia-lyase; Provisional Back     alignment and domain information
>cd01595 Adenylsuccinate_lyase_like Adenylsuccinate lyase (ASL)_like Back     alignment and domain information
>PRK12425 fumarate hydratase; Provisional Back     alignment and domain information
>cd01357 Aspartase Aspartase Back     alignment and domain information
>PRK09053 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>cd03302 Adenylsuccinate_lyase_2 Adenylsuccinate lyase (ASL)_subgroup 2 Back     alignment and domain information
>PRK00485 fumC fumarate hydratase; Reviewed Back     alignment and domain information
>PLN00134 fumarate hydratase; Provisional Back     alignment and domain information
>COG0015 PurB Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR00979 fumC_II fumarate hydratase, class II Back     alignment and domain information
>PRK14515 aspartate ammonia-lyase; Provisional Back     alignment and domain information
>TIGR00839 aspA aspartate ammonia-lyase Back     alignment and domain information
>cd01362 Fumarase_classII Class II fumarases Back     alignment and domain information
>cd01334 Lyase_I Lyase class I family; a group of proteins which catalyze similar beta-elimination reactions Back     alignment and domain information
>cd01596 Aspartase_like aspartase (L-aspartate ammonia-lyase) and fumarase class II enzymes Back     alignment and domain information
>PRK09285 adenylosuccinate lyase; Provisional Back     alignment and domain information
>TIGR02426 protocat_pcaB 3-carboxy-cis,cis-muconate cycloisomerase Back     alignment and domain information
>cd01598 PurB PurB_like adenylosuccinases (adenylsuccinate lyase, ASL) Back     alignment and domain information
>PRK05975 3-carboxy-cis,cis-muconate cycloisomerase; Provisional Back     alignment and domain information
>PLN02848 adenylosuccinate lyase Back     alignment and domain information
>PF00206 Lyase_1: Lyase; InterPro: IPR022761 This entry represents the N-terminal region of lyase-1 family; PDB: 1DOF_C 1K62_B 1AOS_B 2VD6_D 2J91_B 1C3U_B 1C3C_A 3R6Y_C 3R6V_F 3R6Q_F Back     alignment and domain information
>COG1027 AspA Aspartate ammonia-lyase [Amino acid transport and metabolism] Back     alignment and domain information
>COG0114 FumC Fumarase [Energy production and conversion] Back     alignment and domain information
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information
>KOG1317 consensus Fumarase [Energy production and conversion] Back     alignment and domain information
>cd01594 Lyase_I_like Lyase class I_like superfamily: contains the lyase class I family, histidine ammonia-lyase and phenylalanine ammonia-lyase, which catalyze similar beta-elimination reactions Back     alignment and domain information
>PRK08937 adenylosuccinate lyase; Provisional Back     alignment and domain information
>PF14698 ASL_C2: Argininosuccinate lyase C-terminal; PDB: 1XWO_A 2E9F_A 1TJW_C 1TJU_A 1DCN_B 1K7W_B 1HY1_C 1TJV_B 1AUW_A 1U15_B Back     alignment and domain information
>PF10397 ADSL_C: Adenylosuccinate lyase C-terminus; InterPro: IPR019468 Adenylosuccinate lyase catalyses two steps in the synthesis of purine nucleotides: the conversion of succinylaminoimidazole-carboxamide ribotide into aminoimidazole-carboxamide ribotide (the fifth step of de novo IMP biosynthesis); the formation of adenosine monophosphate (AMP) from adenylosuccinate (the final step in the synthesis of AMP from IMP) [] Back     alignment and domain information
>PF08328 ASL_C: Adenylosuccinate lyase C-terminal; InterPro: IPR013539 This domain is found at the C terminus of adenylosuccinate lyase(ASL; PurB in Escherichia coli) Back     alignment and domain information
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle Back     alignment and domain information
>KOG2700 consensus Adenylosuccinate lyase [Nucleotide transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query388
2e9f_A462 Crystal Structure Of T.th.hb8 Argininosuccinate Lya 1e-108
1tj7_A457 Structure Determination And Refinement At 2.44 A Re 7e-98
1k7w_A468 Crystal Structure Of S283a Duck Delta 2 Crystallin 8e-92
1hy1_A468 Crystal Structure Of Wild Type Duck Delta 2 Crystal 2e-91
1auw_A468 H91n Delta 2 Crystallin From Duck Length = 468 2e-91
1u15_A472 Crystal Structure Of A Duck-Delta-Crystallin-1 Doub 4e-91
1tju_A474 Crystal Structure Of T161s Duck Delta 2 Crystallin 5e-91
1tjv_A474 Crystal Structure Of T161d Duck Delta 2 Crystallin 1e-90
1hy0_A466 Crystal Structure Of Wild Type Duck Delta 1 Crystal 1e-90
1dcn_A447 Inactive Mutant H162n Of Delta 2 Crystallin With Bo 2e-90
1xwo_A465 Crystal Structrue Of Goose Delta Crystallin Length 3e-90
1i0a_A466 Crystal Structure Of Wild Type Turkey Delta 1 Cryst 6e-84
1aos_A464 Human Argininosuccinate Lyase Length = 464 4e-83
1k62_A464 Crystal Structure Of The Human Argininosuccinate Ly 1e-82
1re5_A450 Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate Lac 1e-16
1j3u_A468 Crystal Structure Of Aspartase From Bacillus Sp. Ym 6e-16
3r6y_A401 Crystal Structure Of Chymotrypsin-Treated Aspartase 3e-15
3c8t_A451 Crystal Structure Of Fumarate Lyase From Mesorhizob 6e-12
4adl_A495 Crystal Structures Of Rv1098c In Complex With Malat 2e-10
3no9_A475 Crystal Structure Of Apo Fumarate Hydratase From My 2e-10
3qbp_A478 Crystal Structure Of Fumarase Fum From Mycobacteriu 2e-10
1q5n_A454 Crystal Structure Of Beta-Carboxy-Cis,Cis-Muconate 2e-10
3rrp_A471 Crystal Structure Of Fumarate Hydratase Fum From My 3e-10
4apa_A474 Crystal Structure Of Mycobacterium Tuberculosis Fum 4e-10
4apb_A474 Crystal Structure Of Mycobacterium Tuberculosis Fum 9e-10
2pfm_A444 Crystal Structure Of Adenylosuccinate Lyase (Purb) 8e-09
3gtd_A482 2.4 Angstrom Crystal Structure Of Fumarate Hydratas 9e-09
3rd8_A489 Crystal Structure Of Fumarate Hydratase Class Ii My 2e-08
1f1o_A431 Structural Studies Of Adenylosuccinate Lyases Lengt 1e-07
1c3u_A431 T. Maritima Adenylosuccinate Lyase Length = 431 1e-07
1c3c_A429 T. Maritima Adenylosuccinate Lyase Length = 429 1e-07
1yfm_A488 Recombinant Yeast Fumarase Length = 488 2e-07
2x75_A431 Staphylococcus Aureus Adenylosuccinate Lyase Length 5e-07
1vdk_A466 Crystal Structure Of Fumarase From Thermus Thermoph 1e-06
1jsw_A478 Native L-Aspartate Ammonia Lyase Length = 478 2e-06
3e04_A490 Crystal Structure Of Human Fumarate Hydratase Lengt 2e-06
4eei_A438 Crystal Structure Of Adenylosuccinate Lyase From Fr 2e-06
3oce_A474 Crystal Structure Of Fumarate Lyase:delta Crystalli 3e-05
3ocf_A478 Crystal Structure Of Fumarate Lyase:delta Crystalli 4e-05
>pdb|2E9F|A Chain A, Crystal Structure Of T.th.hb8 Argininosuccinate Lyase Complexed With L-arginine Length = 462 Back     alignment and structure 
Iteration: 1

 Score =  389 bits (1000), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 199/385 (51%), Positives = 264/385 (68%), Gaps = 2/385 (0%)
Query: 2   WRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQ 61
           WR + EDVHMN+EA LT+++G P  KLHTARSRNDQV TD RL+ R AID ++  +  L+
Sbjct: 78  WREELEDVHMNLEARLTELVGPPGGKLHTARSRNDQVATDLRLYLRGAIDELLALLLALR 137
Query: 62  VALVKLALKNEG--LIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCP 119
             LV+ A K+     ++PGYTHLQRAQPVLL H  LAY E L+RDAGRL+D + R+N  P
Sbjct: 138 RVLVREAEKHLDPLYVLPGYTHLQRAQPVLLAHWFLAYYEMLKRDAGRLEDAKERLNESP 197
Query: 120 LGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGE 179
           LGA ALAGTG PIDR  TA  L F APMRNS+DAV+ RDF LE LSA +I  +HLSR+ E
Sbjct: 198 LGAAALAGTGFPIDRHFTARELGFKAPMRNSLDAVASRDFALEVLSALNIGMLHLSRMAE 257
Query: 180 EWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLP 239
           E +L+++EEFGF+   D+ +TGSSIMPQKKNPD +EL+R K+ RV+G  V L  + KGLP
Sbjct: 258 ELILYSTEEFGFVEVPDAFATGSSIMPQKKNPDILELIRAKAGRVLGAFVGLSAVVKGLP 317
Query: 240 LAYNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYL 299
           LAYN+DLQEDKEP  D++ T    L + A     + +  ER+ +A   GY  AT LADYL
Sbjct: 318 LAYNKDLQEDKEPLLDALATYRDSLRLLAALLPGLKWRRERMWRAAEGGYTLATELADYL 377
Query: 300 VNKQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKF 359
             K +PFR +H +VG+ V   V +   L+DL+L+E+++ +P+F +D    L +E AI + 
Sbjct: 378 AEKGLPFREAHHVVGRLVRRLVEEGRALKDLTLEELQAHHPLFAEDALPLLRLETAIHRR 437
Query: 360 SSFGSTGSACVTEQLHSWVAKLGIN 384
            S+G T    V E+L     ++G++
Sbjct: 438 RSYGGTAPEAVRERLEEAKKEVGLD 462
>pdb|1TJ7|A Chain A, Structure Determination And Refinement At 2.44 A Resolution Of Argininosuccinate Lyase From E. Coli Length = 457 Back     alignment and structure
>pdb|1K7W|A Chain A, Crystal Structure Of S283a Duck Delta 2 Crystallin Mutant Length = 468 Back     alignment and structure
>pdb|1HY1|A Chain A, Crystal Structure Of Wild Type Duck Delta 2 Crystallin (Eye Lens Protein) Length = 468 Back     alignment and structure
>pdb|1AUW|A Chain A, H91n Delta 2 Crystallin From Duck Length = 468 Back     alignment and structure
>pdb|1U15|A Chain A, Crystal Structure Of A Duck-Delta-Crystallin-1 Double Loop Mutant (Dlm) Length = 472 Back     alignment and structure
>pdb|1TJU|A Chain A, Crystal Structure Of T161s Duck Delta 2 Crystallin Mutant Length = 474 Back     alignment and structure
>pdb|1TJV|A Chain A, Crystal Structure Of T161d Duck Delta 2 Crystallin Mutant Length = 474 Back     alignment and structure
>pdb|1HY0|A Chain A, Crystal Structure Of Wild Type Duck Delta 1 Crystallin (Eye Lens Protein) Length = 466 Back     alignment and structure
>pdb|1DCN|A Chain A, Inactive Mutant H162n Of Delta 2 Crystallin With Bound Argininosuccinate Length = 447 Back     alignment and structure
>pdb|1XWO|A Chain A, Crystal Structrue Of Goose Delta Crystallin Length = 465 Back     alignment and structure
>pdb|1I0A|A Chain A, Crystal Structure Of Wild Type Turkey Delta 1 Crystallin (Eye Lens Protein) Length = 466 Back     alignment and structure
>pdb|1AOS|A Chain A, Human Argininosuccinate Lyase Length = 464 Back     alignment and structure
>pdb|1K62|A Chain A, Crystal Structure Of The Human Argininosuccinate Lyase Q286r Mutant Length = 464 Back     alignment and structure
>pdb|1RE5|A Chain A, Crystal Structure Of 3-Carboxy-Cis,Cis-Muconate Lactonizing Enzyme From Pseudomonas Putida Length = 450 Back     alignment and structure
>pdb|1J3U|A Chain A, Crystal Structure Of Aspartase From Bacillus Sp. Ym55-1 Length = 468 Back     alignment and structure
>pdb|3R6Y|A Chain A, Crystal Structure Of Chymotrypsin-Treated Aspartase From Bacillus Sp. Ym55-1 Length = 401 Back     alignment and structure
>pdb|3C8T|A Chain A, Crystal Structure Of Fumarate Lyase From Mesorhizobium Sp. Bnc1 Length = 451 Back     alignment and structure
>pdb|4ADL|A Chain A, Crystal Structures Of Rv1098c In Complex With Malate Length = 495 Back     alignment and structure
>pdb|3NO9|A Chain A, Crystal Structure Of Apo Fumarate Hydratase From Mycobacterium Tuberculosis Length = 475 Back     alignment and structure
>pdb|3QBP|A Chain A, Crystal Structure Of Fumarase Fum From Mycobacterium Marinum Length = 478 Back     alignment and structure
>pdb|1Q5N|A Chain A, Crystal Structure Of Beta-Carboxy-Cis,Cis-Muconate Cycloisomerase (Cmle) From Acinetobacter Calcoaceticus Sp. Adp1 Length = 454 Back     alignment and structure
>pdb|3RRP|A Chain A, Crystal Structure Of Fumarate Hydratase Fum From Mycobacterium Abscessus With Malate Bound Length = 471 Back     alignment and structure
>pdb|4APA|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Fumarase (Rv1098c) S318a In Apo Form Length = 474 Back     alignment and structure
>pdb|4APB|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Fumarase ( Rv1098c) S318c In Complex With Fumarate Length = 474 Back     alignment and structure
>pdb|2PFM|A Chain A, Crystal Structure Of Adenylosuccinate Lyase (Purb) From Bacillus Anthracis Length = 444 Back     alignment and structure
>pdb|3GTD|A Chain A, 2.4 Angstrom Crystal Structure Of Fumarate Hydratase From Rickettsia Prowazekii Length = 482 Back     alignment and structure
>pdb|3RD8|A Chain A, Crystal Structure Of Fumarate Hydratase Class Ii Mycobacterium Smegmatis Length = 489 Back     alignment and structure
>pdb|1F1O|A Chain A, Structural Studies Of Adenylosuccinate Lyases Length = 431 Back     alignment and structure
>pdb|1C3U|A Chain A, T. Maritima Adenylosuccinate Lyase Length = 431 Back     alignment and structure
>pdb|1C3C|A Chain A, T. Maritima Adenylosuccinate Lyase Length = 429 Back     alignment and structure
>pdb|1YFM|A Chain A, Recombinant Yeast Fumarase Length = 488 Back     alignment and structure
>pdb|2X75|A Chain A, Staphylococcus Aureus Adenylosuccinate Lyase Length = 431 Back     alignment and structure
>pdb|1VDK|A Chain A, Crystal Structure Of Fumarase From Thermus Thermophilus Hb8 Length = 466 Back     alignment and structure
>pdb|1JSW|A Chain A, Native L-Aspartate Ammonia Lyase Length = 478 Back     alignment and structure
>pdb|3E04|A Chain A, Crystal Structure Of Human Fumarate Hydratase Length = 490 Back     alignment and structure
>pdb|4EEI|A Chain A, Crystal Structure Of Adenylosuccinate Lyase From Francisella Tularensis Complexed With Amp And Succinate Length = 438 Back     alignment and structure
>pdb|3OCE|A Chain A, Crystal Structure Of Fumarate Lyase:delta Crystallin From Brucella Melitensis Bound To Cobalt Length = 474 Back     alignment and structure
>pdb|3OCF|A Chain A, Crystal Structure Of Fumarate Lyase:delta Crystallin From Brucella Melitensis In Native Form Length = 478 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query388
1tj7_A457 Argininosuccinate lyase; crystallin, E. coli, fuma 0.0
2e9f_A462 Argininosuccinate lyase; alpha helix bundle; HET: 0.0
1k7w_A468 Delta 2 crystallin; eye lens protein, argininosucc 0.0
3c8t_A451 Fumarate lyase; structural genomics, PSI-2, protei 8e-23
1q5n_A454 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, a 6e-22
1re5_A450 3-carboxy-CIS,CIS-muconate cycloisomerase; homotet 5e-21
1c3c_A429 Protein (adenylosuccinate lyase); purine biosynthe 1e-19
2fel_A359 3-carboxy-CIS,CIS-muconate lactonizing enzyme; bio 4e-19
2pfm_A444 Adenylosuccinate lyase; PURB, purine biosynthesis, 6e-19
4eei_A438 Adenylosuccinate lyase; structural genomics, niaid 2e-16
1dof_A403 Adenylosuccinate lyase; purine biosynthesis; 2.10A 1e-15
1jsw_A478 L-aspartase, L-aspartate ammonia-lyase; amino acid 2e-11
2j91_A503 Adenylosuccinate lyase; disease mutation, adenylos 2e-11
3ocf_A478 Fumarate lyase:delta crystallin; fumarase, brucell 2e-11
3r6q_A468 Aspartase; aspartate ammonia lyase, lyase; 2.40A { 4e-11
3bhg_A459 Adenylosuccinate lyase; structural G PSI-2, protei 9e-11
1yis_A478 Adenylosuccinate lyase; structural genomics, PSI, 2e-10
2ptr_A462 Adenylosuccinate lyase; mutant-substrate complex; 3e-09
1fur_A467 Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, 6e-09
2qga_B465 Adenylosuccinate lyase; malaria, PV003765, SGC, st 9e-09
1yfm_A488 Fumarase, YFUM; lyase, krebs cycle, active site wa 1e-08
1vdk_A466 Fumarase C, fumarate hydratase class II; TCA cycle 2e-08
3e04_A490 Fumarase, fumarate hydratase; TCA cycle, structura 2e-08
3gtd_A482 Fumarase C, fumarate hydratase class II; structura 2e-08
4adm_A495 Fumarase C, fumarate hydratase class II; lyase, tr 1e-07
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-05
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1 Length = 457 Back     alignment and structure
 Score =  659 bits (1703), Expect = 0.0
 Identities = 180/381 (47%), Positives = 244/381 (64%)

Query: 2   WRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQ 61
             +D ED+H  +E  L D +G+  KKLHT RSRNDQV TD +LWC+D +  ++ + ++LQ
Sbjct: 77  LESDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQ 136

Query: 62  VALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLG 121
            ALV+ A  N+  ++PGYTHLQRAQPV   H  LAYVE L RD  RLQD   R++  PLG
Sbjct: 137 SALVETAQNNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLG 196

Query: 122 ACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEW 181
             ALAGT   IDR   A  L F +  RNS+D+VSDRD VLE LSA +I  +HLSR  E+ 
Sbjct: 197 CGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDL 256

Query: 182 VLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLA 241
           + + + E GF+  SD V++GSS+MPQKKNPD +EL+RGK  RV G L  ++   KGLPLA
Sbjct: 257 IFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLA 316

Query: 242 YNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVN 301
           YN+D+QEDKE  FD++ T +  L ++A     I     R ++A   GY +AT LADYLV 
Sbjct: 317 YNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVA 376

Query: 302 KQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSS 361
           K VPFR +H IVG+AV   + +   L+DL L E++  + V D+DVY  L +++ + K ++
Sbjct: 377 KGVPFREAHHIVGEAVVEAIRQGKPLEDLPLSELQKFSQVIDEDVYPILSLQSCLDKRAA 436

Query: 362 FGSTGSACVTEQLHSWVAKLG 382
            G      V + +    A+LG
Sbjct: 437 KGGVSPQQVAQAIAFAQARLG 457
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus} Length = 462 Back     alignment and structure
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A Length = 468 Back     alignment and structure
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP} Length = 451 Back     alignment and structure
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1 Length = 454 Back     alignment and structure
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1 Length = 450 Back     alignment and structure
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A Length = 429 Back     alignment and structure
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A Length = 359 Back     alignment and structure
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A* Length = 444 Back     alignment and structure
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp} Length = 438 Back     alignment and structure
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1 Length = 403 Back     alignment and structure
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1 Length = 478 Back     alignment and structure
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A* Length = 503 Back     alignment and structure
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A Length = 478 Back     alignment and structure
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} PDB: 1j3u_A 3r6v_A 3r6y_A Length = 468 Back     alignment and structure
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp} Length = 459 Back     alignment and structure
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans} Length = 478 Back     alignment and structure
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A Length = 462 Back     alignment and structure
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A Length = 467 Back     alignment and structure
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A Length = 465 Back     alignment and structure
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1 Length = 488 Back     alignment and structure
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1 Length = 466 Back     alignment and structure
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens} Length = 490 Back     alignment and structure
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii} Length = 482 Back     alignment and structure
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A Length = 495 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query388
1tj7_A457 Argininosuccinate lyase; crystallin, E. coli, fuma 100.0
2e9f_A462 Argininosuccinate lyase; alpha helix bundle; HET: 100.0
1k7w_A468 Delta 2 crystallin; eye lens protein, argininosucc 100.0
4eei_A438 Adenylosuccinate lyase; structural genomics, niaid 100.0
1c3c_A429 Protein (adenylosuccinate lyase); purine biosynthe 100.0
1q5n_A454 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, a 100.0
2pfm_A444 Adenylosuccinate lyase; PURB, purine biosynthesis, 100.0
1re5_A450 3-carboxy-CIS,CIS-muconate cycloisomerase; homotet 100.0
3c8t_A451 Fumarate lyase; structural genomics, PSI-2, protei 100.0
1dof_A403 Adenylosuccinate lyase; purine biosynthesis; 2.10A 100.0
3r6q_A468 Aspartase; aspartate ammonia lyase, lyase; 2.40A { 100.0
1yis_A478 Adenylosuccinate lyase; structural genomics, PSI, 100.0
1jsw_A478 L-aspartase, L-aspartate ammonia-lyase; amino acid 100.0
1vdk_A466 Fumarase C, fumarate hydratase class II; TCA cycle 100.0
1fur_A467 Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, 100.0
4adm_A495 Fumarase C, fumarate hydratase class II; lyase, tr 100.0
2j91_A503 Adenylosuccinate lyase; disease mutation, adenylos 100.0
1yfm_A488 Fumarase, YFUM; lyase, krebs cycle, active site wa 100.0
3ocf_A478 Fumarate lyase:delta crystallin; fumarase, brucell 100.0
2qga_B465 Adenylosuccinate lyase; malaria, PV003765, SGC, st 100.0
3e04_A490 Fumarase, fumarate hydratase; TCA cycle, structura 100.0
3gtd_A482 Fumarase C, fumarate hydratase class II; structura 100.0
2ptr_A462 Adenylosuccinate lyase; mutant-substrate complex; 100.0
3bhg_A459 Adenylosuccinate lyase; structural G PSI-2, protei 100.0
4hgv_A495 Fumarase C, fumarate hydratase class II; nysgrc, P 100.0
2fel_A359 3-carboxy-CIS,CIS-muconate lactonizing enzyme; bio 100.0
>1tj7_A Argininosuccinate lyase; crystallin, E. coli, fumarase, ASPA lyase; 2.44A {Escherichia coli} SCOP: a.127.1.1 Back     alignment and structure
Probab=100.00  E-value=5.2e-93  Score=721.56  Aligned_cols=378  Identities=47%  Similarity=0.740  Sum_probs=366.7

Q ss_pred             CCCCchHHHHHHHHHHHhCCCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccc
Q 016508            4 TDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTHLQ   83 (388)
Q Consensus         4 ~~~ed~~~~~E~~l~~~~g~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh~Q   83 (388)
                      +..+|+|+++|+++.+++|+.|+|||+|+||||+++|+++|++|+++..+.+.|..|+++|.++|++|++||||||||+|
T Consensus        79 ~~~~dv~~~v~~~l~e~~g~~g~~vH~g~SsnD~~~Ta~~l~lr~~l~~l~~~l~~l~~~L~~~A~~~~~~~~~GrTHlQ  158 (457)
T 1tj7_A           79 SDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQ  158 (457)
T ss_dssp             SCCSSHHHHHHHHHHHHHGGGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEETTE
T ss_pred             CCCCcHHHHHHHHHHHHccccccceecCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCeeeccccCc
Confidence            56899999999999999998899999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHHHHHHhCCCCCCCCchhhhhchHHHHHH
Q 016508           84 RAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEF  163 (388)
Q Consensus        84 ~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~~e~  163 (388)
                      |||||||||||++|+++|.||++||.+++++++.+||||+|++||++++||+++|+.|||..+..|+++|+.+||+++++
T Consensus       159 ~A~P~T~G~~~~~~~~~l~r~~~rL~~~~~~~~~~~lGgaA~aGt~~~~~~~~la~~LGl~~~~~n~~~~~~~rD~~~e~  238 (457)
T 1tj7_A          159 RAQPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLEL  238 (457)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCBCTTCTTTTCCSSCCCHHHHHHHHTCSSBCSCHHHHHHCCHHHHHH
T ss_pred             CCeechHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccccccCCCCCCCCHHHHHHHcCCCCCCCChHHHHHccHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCccccc
Q 016508          164 LSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLAYN  243 (388)
Q Consensus       164 ~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~~~  243 (388)
                      +++++.++.+|+|||+|+++|+|+|||||++|+.+.+||||||||+||+.+|.++++|+++.|+..++..+.+++|++||
T Consensus       239 ~~~l~~~a~~L~kia~Di~ll~s~e~g~iel~e~~~~GSSiMP~K~NP~~~E~i~~~a~~v~g~~~~~~~~~~~~p~~~~  318 (457)
T 1tj7_A          239 LSAAAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYN  318 (457)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTSTTTCCEECCGGGCBCCTTCTTCCBCHHHHHHHHTHHHHHHHHHHHHHHHTTCCSSCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCCCceeccCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHhh
Confidence            99999999999999999999999999999999888899999999999999999999999999999999999999999999


Q ss_pred             cccccccchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHc
Q 016508          244 RDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCVSK  323 (388)
Q Consensus       244 rd~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~~a~~~  323 (388)
                      ||++++|..+++++..+..++..+..|+++|+||+++|++++..+++++|+++++|+++|+|||+||++++++++.|.++
T Consensus       319 RDl~~~~~~l~~s~~~~~~~l~~~~~~l~gl~vn~~~m~~~l~~~~~~at~l~~~Lv~~G~~~r~Ay~~v~~~~~~a~~~  398 (457)
T 1tj7_A          319 KDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQ  398 (457)
T ss_dssp             GGGGGHHHHHHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHTSTTTTHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhHHhHHHHHHHHHHHHHHHHHHHHccCEECHHHHHHHHhcCCchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999998899999999999999999999999999999999


Q ss_pred             CCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHHHHHHHHh
Q 016508          324 ECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKL  381 (388)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~~~~~~~~  381 (388)
                      |+++.|+..++...+.+.+++++++++||+.++++|.++||++|++|++++.++++.+
T Consensus       399 g~~l~e~~~~~~~~~~~~~~~~l~~~ldp~~~v~~r~~~gG~a~~~v~~~i~~~~~~l  456 (457)
T 1tj7_A          399 GKPLEDLPLSELQKFSQVIDEDVYPILSLQSCLDKRAAKGGVSPQQVAQAIAFAQARL  456 (457)
T ss_dssp             TCCGGGSCHHHHTTTCTTCCTTHHHHTSHHHHHHTCCSTTCCSHHHHHHHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHHhhhcHHHHHHhCCHHHHHhccCCCCCCCHHHHHHHHHHHHHhc
Confidence            9999999988866666667889999999999999999999999999999999998876
>2e9f_A Argininosuccinate lyase; alpha helix bundle; HET: ARG; 2.80A {Thermus thermophilus} Back     alignment and structure
>1k7w_A Delta 2 crystallin; eye lens protein, argininosuccinate lyase, enzyme mechanism; HET: AS1; 1.96A {Anas platyrhynchos} SCOP: a.127.1.1 PDB: 1hy1_A 1tju_A 1auw_A 1tjv_A 1tjw_A* 1u16_A* 1u15_A* 1dcn_A* 1xwo_A 1hy0_A 1i0a_A 1aos_A 1k62_A Back     alignment and structure
>4eei_A Adenylosuccinate lyase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: AMP; 1.92A {Francisella tularensis subsp} Back     alignment and structure
>1c3c_A Protein (adenylosuccinate lyase); purine biosynthesis; 1.80A {Thermotoga maritima} SCOP: a.127.1.1 PDB: 1c3u_A Back     alignment and structure
>1q5n_A 3-carboxy-CIS,CIS-muconate cycloisomerase; CMLE, aromatic degradation; 2.30A {Acinetobacter calcoaceticus} SCOP: a.127.1.1 Back     alignment and structure
>2pfm_A Adenylosuccinate lyase; PURB, purine biosynthesis, B anthracis; 2.00A {Bacillus anthracis} PDB: 1f1o_A 2x75_A* Back     alignment and structure
>1re5_A 3-carboxy-CIS,CIS-muconate cycloisomerase; homotetramer, fumarase class II cycloisomerase, molecular EV isomerase; HET: CIT; 2.60A {Pseudomonas putida} SCOP: a.127.1.1 Back     alignment and structure
>3c8t_A Fumarate lyase; structural genomics, PSI-2, protein structure initiat YORK SGX research center for structural genomics, nysgxrc; 2.20A {Mesorhizobium SP} Back     alignment and structure
>1dof_A Adenylosuccinate lyase; purine biosynthesis; 2.10A {Pyrobaculum aerophilum} SCOP: a.127.1.1 Back     alignment and structure
>3r6q_A Aspartase; aspartate ammonia lyase, lyase; 2.40A {Bacillus SP} SCOP: a.127.1.1 PDB: 1j3u_A 3r6v_A 3r6y_A Back     alignment and structure
>1yis_A Adenylosuccinate lyase; structural genomics, PSI, P structure initiative, southeast collaboratory for structura genomics, secsg; 2.40A {Caenorhabditis elegans} Back     alignment and structure
>1jsw_A L-aspartase, L-aspartate ammonia-lyase; amino acid ammonia-lyase; HET: BGC; 2.70A {Escherichia coli} SCOP: a.127.1.1 Back     alignment and structure
>1vdk_A Fumarase C, fumarate hydratase class II; TCA cycle, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.80A {Thermus thermophilus} SCOP: a.127.1.1 Back     alignment and structure
>1fur_A Fumarase C, FUMC; hydrolyase, carbon oxygen lyase, KREB'S cycle enzyme, fumara hydratase; 1.95A {Escherichia coli} SCOP: a.127.1.1 PDB: 1fuo_A* 1yfe_A 1kq7_A* 1fuq_A* 1fup_A* 2fus_A* 3tv2_A Back     alignment and structure
>4adm_A Fumarase C, fumarate hydratase class II; lyase, tricarboxylic acid cycle; HET: SRT; 1.65A {Mycobacterium tuberculosis} PDB: 4adl_A* 3no9_A 4apa_A 4apb_A 3qbp_A 3rd8_A 3rrp_A Back     alignment and structure
>2j91_A Adenylosuccinate lyase; disease mutation, adenylosuccinase, succino AMP-lyase, purin biosynthesis, adenylosuccinase DEFI AMP, ADSL, saicar, purine; HET: AMP; 1.8A {Homo sapiens} PDB: 2vd6_A* Back     alignment and structure
>1yfm_A Fumarase, YFUM; lyase, krebs cycle, active site water, hydratase, subunit active site; 2.60A {Saccharomyces cerevisiae} SCOP: a.127.1.1 Back     alignment and structure
>3ocf_A Fumarate lyase:delta crystallin; fumarase, brucellosis, orchitis, epididymiti mastitis, dehydration of fumarate to malate, KREB'S cycle; 2.10A {Brucella melitensis} PDB: 3oce_A Back     alignment and structure
>2qga_B Adenylosuccinate lyase; malaria, PV003765, SGC, structural G consortium; HET: AMP; 2.01A {Plasmodium vivax} PDB: 2hvg_A Back     alignment and structure
>3e04_A Fumarase, fumarate hydratase; TCA cycle, structural genomics consortium, alterna initiation, anti-oncogene, cell cycle, disease mutation; 1.95A {Homo sapiens} Back     alignment and structure
>3gtd_A Fumarase C, fumarate hydratase class II; structural genomics, ssgcid, lyase, tricarboxylic acid cycle; 2.40A {Rickettsia prowazekii} Back     alignment and structure
>2ptr_A Adenylosuccinate lyase; mutant-substrate complex; HET: 2SA; 1.85A {Escherichia coli} PDB: 2ptq_A* 2pts_A 3gzh_A Back     alignment and structure
>3bhg_A Adenylosuccinate lyase; structural G PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.90A {Legionella pneumophila subsp} Back     alignment and structure
>4hgv_A Fumarase C, fumarate hydratase class II; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 2.09A {Sinorhizobium meliloti} Back     alignment and structure
>2fel_A 3-carboxy-CIS,CIS-muconate lactonizing enzyme; biodegradation, sulphonic acids, 3-sulphomuconate; 2.20A {Agrobacterium tumefaciens} PDB: 2fen_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 388
d1tj7a_455 a.127.1.1 (A:) Argininosuccinate lyase/delta-cryst 2e-93
d1k62b_459 a.127.1.1 (B:) Argininosuccinate lyase/delta-cryst 2e-84
d1tjva_449 a.127.1.1 (A:) Argininosuccinate lyase/delta-cryst 3e-83
d1c3ca_429 a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga 5e-59
d1fuoa_456 a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 5e-51
d1yfma_459 a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomy 2e-48
d1j3ua_462 a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus 2e-45
d1vdka_460 a.127.1.1 (A:) Fumarase {Thermus thermophilus [Tax 8e-43
d1jswa_459 a.127.1.1 (A:) L-aspartate ammonia lyase {Escheric 2e-41
d1re5a_448 a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloiso 4e-39
d1dofa_402 a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Py 1e-37
d1q5na_444 a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloiso 2e-31
>d1tj7a_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Escherichia coli [TaxId: 562]} Length = 455 Back     information, alignment and structure

class: All alpha proteins
fold: L-aspartase-like
superfamily: L-aspartase-like
family: L-aspartase/fumarase
domain: Argininosuccinate lyase/delta-crystallin
species: Escherichia coli [TaxId: 562]

 Score =  285 bits (730), Expect = 2e-93
 Identities = 180/381 (47%), Positives = 244/381 (64%)

Query: 2   WRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQ 61
             +D ED+H  +E  L D +G+  KKLHT RSRNDQV TD +LWC+D +  ++ + ++LQ
Sbjct: 75  LESDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQ 134

Query: 62  VALVKLALKNEGLIVPGYTHLQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLG 121
            ALV+ A  N+  ++PGYTHLQRAQPV   H  LAYVE L RD  RLQD   R++  PLG
Sbjct: 135 SALVETAQNNQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLG 194

Query: 122 ACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVLEFLSANSIIAIHLSRLGEEW 181
             ALAGT   IDR   A  L F +  RNS+D+VSDRD VLE LSA +I  +HLSR  E+ 
Sbjct: 195 CGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDL 254

Query: 182 VLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLA 241
           + + + E GF+  SD V++GSS+MPQKKNPD +EL+RGK  RV G L  ++   KGLPLA
Sbjct: 255 IFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLA 314

Query: 242 YNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVN 301
           YN+D+QEDKE  FD++ T +  L ++A     I     R ++A   GY +AT LADYLV 
Sbjct: 315 YNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVA 374

Query: 302 KQVPFRTSHDIVGKAVALCVSKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSS 361
           K VPFR +H IVG+AV   + +   L+DL L E++  + V D+DVY  L +++ + K ++
Sbjct: 375 KGVPFREAHHIVGEAVVEAIRQGKPLEDLPLSELQKFSQVIDEDVYPILSLQSCLDKRAA 434

Query: 362 FGSTGSACVTEQLHSWVAKLG 382
            G      V + +    A+LG
Sbjct: 435 KGGVSPQQVAQAIAFAQARLG 455
>d1k62b_ a.127.1.1 (B:) Argininosuccinate lyase/delta-crystallin {Human (Homo sapiens) [TaxId: 9606]} Length = 459 Back     information, alignment and structure
>d1tjva_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]} Length = 449 Back     information, alignment and structure
>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima [TaxId: 2336]} Length = 429 Back     information, alignment and structure
>d1fuoa_ a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 562]} Length = 456 Back     information, alignment and structure
>d1yfma_ a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 459 Back     information, alignment and structure
>d1j3ua_ a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus sp., ym55-1 [TaxId: 1409]} Length = 462 Back     information, alignment and structure
>d1vdka_ a.127.1.1 (A:) Fumarase {Thermus thermophilus [TaxId: 274]} Length = 460 Back     information, alignment and structure
>d1jswa_ a.127.1.1 (A:) L-aspartate ammonia lyase {Escherichia coli [TaxId: 562]} Length = 459 Back     information, alignment and structure
>d1re5a_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Pseudomonas putida, strain KT2440 [TaxId: 303]} Length = 448 Back     information, alignment and structure
>d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Length = 402 Back     information, alignment and structure
>d1q5na_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Acinetobacter calcoaceticus [TaxId: 471]} Length = 444 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query388
d1tj7a_455 Argininosuccinate lyase/delta-crystallin {Escheric 100.0
d1k62b_459 Argininosuccinate lyase/delta-crystallin {Human (H 100.0
d1tjva_449 Argininosuccinate lyase/delta-crystallin {Domestic 100.0
d1f1oa_408 Adenylosuccinate lyase {Bacillus subtilis [TaxId: 100.0
d1c3ca_429 Adenylosuccinate lyase {Thermotoga maritima [TaxId 100.0
d1re5a_448 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) { 100.0
d1q5na_444 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) { 100.0
d1j3ua_462 L-aspartate ammonia lyase {Bacillus sp., ym55-1 [T 100.0
d1jswa_459 L-aspartate ammonia lyase {Escherichia coli [TaxId 100.0
d1yfma_459 Fumarase {Baker's yeast (Saccharomyces cerevisiae) 100.0
d1vdka_460 Fumarase {Thermus thermophilus [TaxId: 274]} 100.0
d1fuoa_456 Fumarase {Escherichia coli [TaxId: 562]} 100.0
d1dofa_402 Adenylosuccinate lyase {Archaeon Pyrobaculum aerop 100.0
>d1tj7a_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: All alpha proteins
fold: L-aspartase-like
superfamily: L-aspartase-like
family: L-aspartase/fumarase
domain: Argininosuccinate lyase/delta-crystallin
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.8e-93  Score=721.68  Aligned_cols=381  Identities=47%  Similarity=0.739  Sum_probs=371.5

Q ss_pred             CCCCCCchHHHHHHHHHHHhCCCCCccccCCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccc
Q 016508            2 WRTDREDVHMNIEAALTDIIGEPAKKLHTARSRNDQVLTDFRLWCRDAIDTIVRSIQRLQVALVKLALKNEGLIVPGYTH   81 (388)
Q Consensus         2 ~~~~~ed~~~~~E~~l~~~~g~~~~~lH~g~SsnDi~~ta~~l~lr~~~~~l~~~l~~l~~~L~~~A~~~~~~~~~grTh   81 (388)
                      ++|+.||||+++|++|.+++|+.|+|||+|+||||+++|+++|++|+.+..+.+.+..|+++|.++|++|++||||||||
T Consensus        75 ~~~~~edv~~~ie~~l~~~~g~~~~~vH~G~S~nD~~~Ta~~l~~r~~l~~l~~~l~~l~~~L~~~A~~~~~~~m~GrTH  154 (455)
T d1tj7a_          75 LESDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTH  154 (455)
T ss_dssp             GGSCCSSHHHHHHHHHHHHHGGGGGGTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEET
T ss_pred             CCCCcccHHHHHHHHHHhhcCcchhhccCCccchhHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHHhhhchhhhHHHH
Confidence            36889999999999999999988999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccchhhHHHHHHHHHHHHHHHHHHHHHhhhccccCCccccCCCCCCCCHHHHHHHhCCCCCCCCchhhhhchHHHH
Q 016508           82 LQRAQPVLLQHLLLAYVEQLERDAGRLQDCRVRMNFCPLGACALAGTGLPIDRFMTAEALEFTAPMRNSIDAVSDRDFVL  161 (388)
Q Consensus        82 ~Q~A~P~TfG~~l~~~~~~l~r~~~rL~~~~~~~~~~~lG~~a~~Gt~~~~~r~~~a~~LG~~~~~~n~~~a~~~rd~~~  161 (388)
                      +||||||||||||++|+++|.||++||.+++++++.+|+|+|+++|+++++|++++++.|||..+..|+++|+.+||+++
T Consensus       155 ~Q~A~P~T~G~~~~~~~~~l~r~~~rl~~~~~~~~~~~lG~~a~~g~~~~~~~~~~a~~Lg~~~~~~n~~~~~~~rd~~~  234 (455)
T d1tj7a_         155 LQRAQPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGFASATRNSLDSVSDRDHVL  234 (455)
T ss_dssp             TEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCBCTTCTTTTCCSSCCCHHHHHHHHTCSSBCSCHHHHHHCCHHHH
T ss_pred             hhhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcCcchHHHHHHHhCCCcccCCccchhhchHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999988899999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHhhHHHHHHHHhcCccc
Q 016508          162 EFLSANSIIAIHLSRLGEEWVLWASEEFGFITPSDSVSTGSSIMPQKKNPDPMELVRGKSARVIGDLVTLLTLCKGLPLA  241 (388)
Q Consensus       162 e~~~~l~~~~~~L~kia~Dl~l~~s~e~gev~~~~~~~~gSS~MP~K~NP~~~E~i~~~a~~~~g~~~~~~~~~~~~~~~  241 (388)
                      +++++++.++.+|+|||+|+++|+++|+|++++|+++++|||||||||||+.+|.++++|+.+.|...++..+++++|++
T Consensus       235 e~~~~l~~~~~~L~ria~Dl~l~~s~e~~~~~~~~~~~~GSSiMP~KrNP~~~E~i~~~a~~v~g~~~~~~~~~~~~~~~  314 (455)
T d1tj7a_         235 ELLSAAAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLA  314 (455)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTSTTTCCEECCGGGCBCCTTCTTCCBCHHHHHHHHTHHHHHHHHHHHHHHHTTCCSS
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHhhhhhhheeeccccccccccccccccCchHHHHHHhHHHHHHhHHHHHHHHHhcccHH
Confidence            99999999999999999999999999999999988999999999999999999999999999999999999999999999


Q ss_pred             cccccccccchHHHHHHHHHHHHHHHHHhhhcceeCHHHHHHhcccChhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHH
Q 016508          242 YNRDLQEDKEPTFDSVKTIVGMLEVSAEFAQNITFNVERIKKALPAGYLDATTLADYLVNKQVPFRTSHDIVGKAVALCV  321 (388)
Q Consensus       242 ~~rd~~~~~~~l~~~~~~~~~~l~~~~~~l~~l~vn~~~m~~~l~~~~~~a~~la~~L~~~gi~~r~Ah~~v~~~~~~a~  321 (388)
                      ||||+++.+..+++++..+..++..+..++++++||+++|+++++.+++++|+++++|+++|+|||+||++|++++++|.
T Consensus       315 ~~rd~~~~~~~l~~~~~~~~~~l~~~~~~i~~l~vn~erm~~~~~~~~~~at~la~~Lv~kgi~freAh~~V~~~v~~A~  394 (455)
T d1tj7a_         315 YNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAVVEAI  394 (455)
T ss_dssp             CCGGGGGHHHHHHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHTSTTTTHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred             HHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcchhHHHHhhcchhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999888999999999999999999999999999999


Q ss_pred             HcCCChHHhhHHhhhccCCCCHHHHHhhcCHHHHhhhhccCCCccHHHHHHHHHHHHHHhh
Q 016508          322 SKECQLQDLSLDEMRSLNPVFDKDVYEYLGVENAIRKFSSFGSTGSACVTEQLHSWVAKLG  382 (388)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~ldp~~~v~~~~~~gg~a~~~v~~~~~~~~~~~~  382 (388)
                      ++|+++.|+..++...+...+++|+.++|||++++++|.++||++|++|+++|.+++++|.
T Consensus       395 ~~g~~l~el~l~e~~~~~~~~~~di~~~ldp~~~v~~r~s~GG~ap~~V~~~i~~ar~~Lg  455 (455)
T d1tj7a_         395 RQGKPLEDLPLSELQKFSQVIDEDVYPILSLQSCLDKRAAKGGVSPQQVAQAIAFAQARLG  455 (455)
T ss_dssp             HHTCCGGGSCHHHHTTTCTTCCTTHHHHTSHHHHHHTCCSTTCCSHHHHHHHHHHHHHHHC
T ss_pred             HhCCCHHHHhHHHHHHhcccCHHHHHHhCCHHHHHHhCcCCCCCCHHHHHHHHHHHHHhcC
Confidence            9999999999998887778888999999999999999999999999999999999998873
>d1k62b_ a.127.1.1 (B:) Argininosuccinate lyase/delta-crystallin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1tjva_ a.127.1.1 (A:) Argininosuccinate lyase/delta-crystallin {Domestic duck (Anas platyrhynchos), delta-crystallin [TaxId: 8839]} Back     information, alignment and structure
>d1f1oa_ a.127.1.1 (A:) Adenylosuccinate lyase {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1c3ca_ a.127.1.1 (A:) Adenylosuccinate lyase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1re5a_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Pseudomonas putida, strain KT2440 [TaxId: 303]} Back     information, alignment and structure
>d1q5na_ a.127.1.1 (A:) 3-carboxy-cis,cis-muconate cycloisomerase (CMLE) {Acinetobacter calcoaceticus [TaxId: 471]} Back     information, alignment and structure
>d1j3ua_ a.127.1.1 (A:) L-aspartate ammonia lyase {Bacillus sp., ym55-1 [TaxId: 1409]} Back     information, alignment and structure
>d1jswa_ a.127.1.1 (A:) L-aspartate ammonia lyase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1yfma_ a.127.1.1 (A:) Fumarase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1vdka_ a.127.1.1 (A:) Fumarase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1fuoa_ a.127.1.1 (A:) Fumarase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1dofa_ a.127.1.1 (A:) Adenylosuccinate lyase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure