Citrus Sinensis ID: 016705

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380----
Protein Sequence
MGLIVDRKKPDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDLRNVAMGWEHAKDSKKGFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFKRLMPFLSSTVPEGAFENVIMGWDWEHAKDSRKGFVDFKAYLAAGTKIEDLMIGIDGGKYLTIGMLEKKEHEGDTSLKQYEGNNFRSFLLPDGLGPFGYSTSMDDAGILTLTFTILKPNKKLVSKSKLLAGMARVVPACLMIGCEISDKISGDDFY
Secondary Structure (PSIPRED)
ccccccccccccccccccccccEEEEEEEEEcccccccEEEEEEccEEEEEEccccccccccccccccHHHHHHHHHcccccccccccccccccEEEEEEEccccccccccccccccccEEEEEEEccccccccccccccccccccccccccHHHHHHcccccccEEEEEEcccEEEEEEEEccccccccccccccccccEEEcccccccccccccccccccEEEEEEHHHccccccccccccHHcEEEccccccccccccccccHHHHHHcccccEEEEEEEcccEEEEEEcEEcccccccccccccccccEEEEEccccccccccccccccccEEEEEEEEEEcccccccHHHHHcccccccccEEEEEcEEcccccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEcccccccEEEEccccccEEEEEEEEcccccccEEEEEEcccEEEEEEccccccccccccccHHHHHHHHHHHHHHHccccccccccccEEEEEEcccccccccccccccccccEEEEEEHHHHHHcHHHHHHcHHHcHccccccEEHHHHHHccccHccEEEEEEcccEEEEEHHHcccccccccHEEccccccccEcccccccccccccccccccHHEEHHHHHccHcccccccccHHEEEEcccHHHccccccccccHHHHHHccccHHHEEEEcccccEEEEHHHcccccccccccHHcccccccHEEccccccccccccccccccHEEEHHHEcccccccccHHHHHHHHHHHcHHEEEEEEEEcccccccccc
Coil and Loop (DISEMBL)
mglivdrkkpdpvsaiweedersVHFKVFLasgmkqedvKIVIQDGKLVIMTeatsshspspssasssISSFFSFLKKNeeardtsslnrpndgkiemnfslpvgvdpdgfstsmddagvLTLTFKRQRAFDLRNVAMgwehakdskkgFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQkkeqegdtsvkqyhgnnfrsflfpdgvdpfgfstsmddagVLTLTFKrlmpflsstvpegafenvimgwdwehakdsrkGFVDFKAYLAAGTKIEDLMIGIDGGKYLTIGMlekkehegdtslkqyegnnfrsfllpdglgpfgystsmddagiLTLTFTilkpnkklvsKSKLLAGMARVVPACLMIGceisdkisgddfy
Flexible Loop (DISEMBL)
mglivdrkkpdpvsaiweedersVHFKVflasgmkqedvKIVIQDGKLVIMTEAtsshspspssasSSISSFFSFLKKNEEardtsslnrpndgkIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDLRNVAMGwehakdskkgfVDFKAYLaagtkiedlvVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFKRLMPFLSSTVPEGAFENVIMGWDWEHAKDSRKGFVDFKAYLAAgtkiedlmiGIDGGKYLTIGMLEKKEHEGDTSLKQYEGNNFRSFLLPDGLGPFGYSTSMDDAGILTLTFTILKPNKKLVSKSKLLAGMARVVPACLMIGCeisdkisgddfy
Low Complexity Region (SEG)
MGLIVDRKKPDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATsshspspssasssissffsfLKKNEEARDTSSLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDLRNVAMGWEHAKDSKKGFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFKRLMPFLSSTVPEGAFENVIMGWDWEHAKDSRKGFVDFKAYLAAGTKIEDLMIGIDGGKYLTIGMLEKKEHEGDTSLKQYEGNNFRSFLLPDGLGPFGYSTSMDDAGILTLTFTILKPNKKLVSKSKLLAGMARVVPACLMIGCEISDKISGDDFY
Disordered region (IsUnstruct)
**************AIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIM***************************************************************MDDAGVLTLTFKRQRAFDLRNVAMGWEHAKDSKKGFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQK********VKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFKRLMPFLSSTVPEGAFENVIMGWDWEHAKDSRKGFVDFKAYLAAGTKIEDLMIGIDGGKYLTIGMLEK*********KQYEGNNFRSFLLPDGLGPFGYSTSMDDAGILTLTFTILKPNKKLVSKSKLLAGMARVVPACLMIGCEISD********
Disordered Region (DISOPRED)
*GL****KKPDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVI***********************SFL*******************IEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDLRNVAMGWEHAKDSKKGFVDFKAYLAAGTKIEDLVVVIERGKYLIVG*****************GNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFKRLMPFLSSTVPEGAFENVIMGWDWEHAKDSRKGFVDFKAYLAAGTKIEDLMIGIDGGKYLTIGML***************GNNFRSFLLPDGLGPFGYSTSMDDAGILTLTFTILKPNKKLVSKSKLLAGMARVVPACLMIGCEISDKIS*****
Disordered Region (DISEMBL)
MGLIVDRKKPDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTE*****************SFFSFLKKN*********NRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDLRNVAMGWEHAKDSKKGFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFKRLMPFLSSTVPEGAFENVIMGWDWEHAKDSRKGFVDFKAYLAAGTKIEDLMIGIDGGKYLTIGMLEKKEHEGDTSLKQYEGNNFRSFLLPDGLGPFGYSTSMDDAGILTLTFTILKPNKKLVSKSKLLAGMARVVPACLMIGCEISDKISGDDFY
Disordered Region (DISPRO)
*GLIVDRKKPDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEA****************SFFSF**K*E**RDTSSLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDLRNVAMGWEHAKDSKKGFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFKRLMPFLSSTVPEGAFENVIMGWDWEHAKDSRKGFVDFKAYLAAGTKIEDLMIGIDGGKYLTIGMLEKKEHEGDTSLKQYEGNNFRSFLLPDGLGPFGYSTSMDDAGILTLTFTILKPNKKLVSKSKLLAGMARVVPACLMIGCEISDKIS***F*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGLIVDRKKPDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDLRNVAMGWEHAKDSKKGFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFKRLMPFLSSTVPEGAFENVIMGWDWEHAKDSRKGFVDFKAYLAAGTKIEDLMIGIDGGKYLTIGMLEKKEHEGDTSLKQYEGNNFRSFLLPDGLGPFGYSTSMDDAGILTLTFTILKPNKKLVSKSKLLAGMARVVPACLMIGCEISDKISGDDFY
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

No hits with e-value below 0.001 by BLAST

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

No hits with e-value below 0.001 by BLAST

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

No hits with e-value below 0.001 by BLAST

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Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	384
pfam00011	101	pfam00011, HSP20, Hsp20/alpha crystallin family	8e-07
cd06464	88	cd06464, ACD_sHsps-like, Alpha-crystallin domain (	1e-06
cd00298	80	cd00298, ACD_sHsps_p23-like, This domain family in	3e-06
pfam00011	101	pfam00011, HSP20, Hsp20/alpha crystallin family	6e-05
cd06464	88	cd06464, ACD_sHsps-like, Alpha-crystallin domain (	4e-04
cd00298	80	cd00298, ACD_sHsps_p23-like, This domain family in	0.001
cd06526	83	cd06526, metazoan_ACD, Alpha-crystallin domain (AC	0.002

>gnl|CDD|215655 pfam00011, HSP20, Hsp20/alpha crystallin family

 Score = 46.8 bits (112), Expect = 8e-07
 Identities = 27/110 (24%), Positives = 43/110 (39%), Gaps = 28/110 (25%)

Query: 16  IWEEDERSVHFKVFLA-SGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFS 74
           I E+ +    F V L   G K E++K+ ++D ++++       H                
Sbjct: 2   IKEDKD---AFVVKLDVPGFKPEELKVKVEDNRVLV----KGKH---------------- 38

Query: 75  FLKKNEEARDTSSLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLT 124
              + EE  D    +  +       F LP   DPD    S+ D GVLT+T
Sbjct: 39  ---EKEEEDDHGLRSERSYRSFSRKFVLPENADPDKVKASLKD-GVLTVT 84

Length = 101

>gnl|CDD|107221 cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)

 Score = 46.0 bits (110), Expect = 1e-06
 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 24/111 (21%)

Query: 17  WEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFL 76
             E + +   +  L  G K+ED+K+ ++DG L I             S            
Sbjct: 2   VYETDDAYVVEADLP-GFKKEDIKVEVEDGVLTI-------------SGER--------- 38

Query: 77  KKNEEARDTSSLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKR 127
           ++ EE  +       + G    +F LP  VDPD    S+++ GVLT+T  +
Sbjct: 39  EEEEEEEENYLRRERSYGSFSRSFRLPEDVDPDKIKASLEN-GVLTITLPK 88

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. Length = 88

>gnl|CDD|107219 cd00298, ACD_sHsps_p23-like, This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins

 Score = 44.5 bits (106), Expect = 3e-06
 Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 31/111 (27%)

Query: 17  WEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFL 76
           W + +  V   V L  G+K+ED+K+ ++D  L I                       S  
Sbjct: 1   WYQTDDEVVVTVDLP-GVKKEDIKVEVEDNVLTI-----------------------SGK 36

Query: 77  KKNEEARDTSSLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKR 127
           ++ EE R+ S       G+ E +F LP  VDP+    S+++ GVL +T  +
Sbjct: 37  REEEEERERSY------GEFERSFELPEDVDPEKSKASLEN-GVLEITLPK 80

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind1), NUD (nuclear distribution) C, Melusin, and NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR). Length = 80

>gnl|CDD|215655 pfam00011, HSP20, Hsp20/alpha crystallin family

 Score = 41.4 bits (98), Expect = 6e-05
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)

Query: 144 KDSKKGFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNN-F-R 201
           K+ K  FV  K  +  G K E+L V +E  + L+ G   +KE+E D  ++       F R
Sbjct: 3   KEDKDAFV-VKLDVP-GFKPEELKVKVEDNRVLVKGK-HEKEEEDDHGLRSERSYRSFSR 59

Query: 202 SFLFPDGVDPFGFSTSMDDAGVLTLT 227
            F+ P+  DP     S+ D GVLT+T
Sbjct: 60  KFVLPENADPDKVKASLKD-GVLTVT 84

Length = 101

>gnl|CDD|107221 cd06464, ACD_sHsps-like, Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)

 Score = 38.7 bits (91), Expect = 4e-04
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 11/92 (11%)

Query: 144 KDSKKGFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHG----NN 199
            ++   +V  +A L  G K ED+ V +E G   I G   ++E+E +             +
Sbjct: 3   YETDDAYV-VEADLP-GFKKEDIKVEVEDGVLTISG---EREEEEEEEENYLRRERSYGS 57

Query: 200 F-RSFLFPDGVDPFGFSTSMDDAGVLTLTFKR 230
           F RSF  P+ VDP     S+++ GVLT+T  +
Sbjct: 58  FSRSFRLPEDVDPDKIKASLEN-GVLTITLPK 88

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. Length = 88

>gnl|CDD|107219 cd00298, ACD_sHsps_p23-like, This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins

 Score = 37.2 bits (87), Expect = 0.001
 Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 6/71 (8%)

Query: 160 GTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMD 219
           G K ED+ V +E    L +   +++E+E + S  ++     RSF  P+ VDP     S++
Sbjct: 16  GVKKEDIKVEVE-DNVLTISGKREEEEERERSYGEFE----RSFELPEDVDPEKSKASLE 70

Query: 220 DAGVLTLTFKR 230
           + GVL +T  +
Sbjct: 71  N-GVLEITLPK 80

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind1), NUD (nuclear distribution) C, Melusin, and NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR). Length = 80

>gnl|CDD|107247 cd06526, metazoan_ACD, Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps)

 Score = 36.7 bits (86), Expect = 0.002
 Identities = 30/112 (26%), Positives = 45/112 (40%), Gaps = 37/112 (33%)

Query: 18  EEDERSVHFKVFL-ASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFL 76
             ++    F+V L   G K E++K+ + D KLV+  E                       
Sbjct: 1   VVNDDDEKFQVTLDVKGFKPEELKVKVSDNKLVV--EG---------------------- 36

Query: 77  KKNEEARDTSSLNRPNDGKIEMNFS----LPVGVDPDGFSTSMDDAGVLTLT 124
            K+EE  D         G +   F+    LP GVDPD  ++S+   GVLT+ 
Sbjct: 37  -KHEEREDEH-------GYVSREFTRRYQLPEGVDPDSVTSSLSSDGVLTIE 80

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. Length = 83

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	384
PRK11597	142	heat shock chaperone IbpB; Provisional	99.91
COG0071	146	IbpA Molecular chaperone (small heat shock protein	99.91
PRK10743	137	heat shock protein IbpA; Provisional	99.9
cd06472	92	ACD_ScHsp26_like Alpha crystallin domain (ACD) fou	99.9
cd06471	93	ACD_LpsHSP_like Group of bacterial proteins contai	99.88
cd06470	90	ACD_IbpA-B_like Alpha-crystallin domain (ACD) foun	99.86
PF00011	102	HSP20: Hsp20/alpha crystallin family This prints e	99.85
cd06497	86	ACD_alphaA-crystallin_HspB4 Alpha-crystallin domai	99.81
cd06482	87	ACD_HspB10 Alpha crystallin domain (ACD) found in	99.8
cd06478	83	ACD_HspB4-5-6 Alpha-crystallin domain found in alp	99.79
cd06479	81	ACD_HspB7_like Alpha crystallin domain (ACD) found	99.79
cd06498	84	ACD_alphaB-crystallin_HspB5 Alpha-crystallin domai	99.78
cd06464	88	ACD_sHsps-like Alpha-crystallin domain (ACD) of al	99.77
cd06475	86	ACD_HspB1_like Alpha crystallin domain (ACD) found	99.76
cd06481	87	ACD_HspB9_like Alpha crystallin domain (ACD) found	99.75
cd06476	83	ACD_HspB2_like Alpha crystallin domain (ACD) found	99.75
cd06526	83	metazoan_ACD Alpha-crystallin domain (ACD) of meta	99.74
cd06477	83	ACD_HspB3_Like Alpha crystallin domain (ACD) found	99.7
KOG0710	196	consensus Molecular chaperone (small heat-shock pr	99.59
cd06480	91	ACD_HspB8_like Alpha-crystallin domain (ACD) found	99.51
KOG3591	173	consensus Alpha crystallins [Posttranslational mod	99.37
cd00298	80	ACD_sHsps_p23-like This domain family includes the	99.37
cd06481	87	ACD_HspB9_like Alpha crystallin domain (ACD) found	99.29
cd06480	91	ACD_HspB8_like Alpha-crystallin domain (ACD) found	99.24
cd06498	84	ACD_alphaB-crystallin_HspB5 Alpha-crystallin domai	99.14
cd06479	81	ACD_HspB7_like Alpha crystallin domain (ACD) found	99.09
cd06478	83	ACD_HspB4-5-6 Alpha-crystallin domain found in alp	99.08
cd06476	83	ACD_HspB2_like Alpha crystallin domain (ACD) found	99.07
cd06469	78	p23_DYX1C1_like p23_like domain found in proteins	99.05
cd06475	86	ACD_HspB1_like Alpha crystallin domain (ACD) found	98.97
cd06526	83	metazoan_ACD Alpha-crystallin domain (ACD) of meta	98.95
cd06497	86	ACD_alphaA-crystallin_HspB4 Alpha-crystallin domai	98.93
cd06477	83	ACD_HspB3_Like Alpha crystallin domain (ACD) found	98.9
cd06482	87	ACD_HspB10 Alpha crystallin domain (ACD) found in	98.87
KOG3591	173	consensus Alpha crystallins [Posttranslational mod	98.82
PF00011	102	HSP20: Hsp20/alpha crystallin family This prints e	98.77
cd06463	84	p23_like Proteins containing this p23_like domain	98.72
cd06472	92	ACD_ScHsp26_like Alpha crystallin domain (ACD) fou	98.69
cd06464	88	ACD_sHsps-like Alpha-crystallin domain (ACD) of al	98.68
PF05455	177	GvpH: GvpH; InterPro: IPR008633 This family consis	98.57
cd06466	84	p23_CS_SGT1_like p23_like domain similar to the C-	98.37
cd06471	93	ACD_LpsHSP_like Group of bacterial proteins contai	98.36
cd06470	90	ACD_IbpA-B_like Alpha-crystallin domain (ACD) foun	98.27
PRK11597	142	heat shock chaperone IbpB; Provisional	98.15
PF04969	79	CS: CS domain; InterPro: IPR017447 The function of	98.14
COG0071	146	IbpA Molecular chaperone (small heat shock protein	97.98
cd00298	80	ACD_sHsps_p23-like This domain family includes the	97.97
PRK10743	137	heat shock protein IbpA; Provisional	97.94
cd06465	108	p23_hB-ind1_like p23_like domain found in human (h	97.72
cd06489	84	p23_CS_hSgt1_like p23_like domain similar to the C	97.36
PF08190	328	PIH1: pre-RNA processing PIH1/Nop17	97.26
cd06488	87	p23_melusin_like p23_like domain similar to the C-	97.0
cd06468	92	p23_CacyBP p23_like domain found in proteins simil	96.87
cd06467	85	p23_NUDC_like p23_like domain of NUD (nuclear dist	96.4
cd06493	85	p23_NUDCD1_like p23_NUDCD1: p23-like NUD (nuclear	96.29
cd06494	93	p23_NUDCD2_like p23-like NUD (nuclear distribution	95.88
cd00237	106	p23 p23 binds heat shock protein (Hsp)90 and parti	95.76
PLN03088	356	SGT1, suppressor of G2 allele of SKP1; Provisional	95.61
cd06469	78	p23_DYX1C1_like p23_like domain found in proteins	95.52
KOG1309	196	consensus Suppressor of G2 allele of skp1 [Signal	94.92
KOG0710	196	consensus Molecular chaperone (small heat-shock pr	94.38
cd06490	87	p23_NCB5OR p23_like domain found in NAD(P)H cytoch	93.39
cd06463	84	p23_like Proteins containing this p23_like domain	92.0
cd06492	87	p23_mNUDC_like p23-like NUD (nuclear distribution)	81.36

>PRK11597 heat shock chaperone IbpB; Provisional

Probab=99.91  E-value=5.2e-24  Score=187.34  Aligned_cols=109  Identities=16%  Similarity=0.224  Sum_probs=94.2

Q ss_pred             CCCCCeeeEEE-eCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCce
Q 016705            8 KKPDPVSAIWE-EDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTS   86 (384)
Q Consensus         8 ~~~~P~VDV~E-TDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~   86 (384)
                      ....|++||+| ++++|+|++  +|||++|+||+|+++++.|+|+|+++.+.   +.                    .+|
T Consensus        29 ~~~~P~vdI~e~~~~~y~v~a--dlPGv~kedi~V~v~~~~LtI~ge~~~~~---~~--------------------~~~   83 (142)
T PRK11597         29 SQSFPPYNIEKSDDNHYRITL--ALAGFRQEDLDIQLEGTRLTVKGTPEQPE---KE--------------------VKW   83 (142)
T ss_pred             cCCCCcEEEEEcCCCEEEEEE--EeCCCCHHHeEEEEECCEEEEEEEEcccc---CC--------------------CcE
Confidence            45679999998 577999999  99999999999999999999999975321   11                    258


Q ss_pred             EEeecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeec--CCCCcceEEecccccc
Q 016705           87 SLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQ--RAFDLRNVAMGWEHAK  144 (384)
Q Consensus        87 ~~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~--epe~~RrIaIg~~~~~  144 (384)
                      +++||++|+|+|+|.||++||.+  +|+|+| |||+|+|||.  +..++|+|+|.-.+|-
T Consensus        84 ~~~Er~~g~F~R~f~LP~~vd~~--~A~~~n-GVL~I~lPK~~~~~~~~rkI~I~~~~~~  140 (142)
T PRK11597         84 LHQGLVNQPFSLSFTLAENMEVS--GATFVN-GLLHIDLIRNEPEAIAPQRIAISERPAL  140 (142)
T ss_pred             EEEEEeCcEEEEEEECCCCcccC--cCEEcC-CEEEEEEeccCccccCCcEEEECCcccc
Confidence            99999999999999999999998  799999 9999999997  5567899999755543

>COG0071 IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]

Probab=99.91  E-value=5.8e-24  Score=184.08  Aligned_cols=106  Identities=22%  Similarity=0.338  Sum_probs=95.5

Q ss_pred             CCCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEE
Q 016705            9 KPDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSL   88 (384)
Q Consensus         9 ~~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~   88 (384)
                      ...|++||+|++++|+|++  +||||+++||+|+++++.|+|+|+++.+.....                     ..++.
T Consensus        38 ~~~P~vdi~e~~~~~~I~~--elPG~~kedI~I~~~~~~l~I~g~~~~~~~~~~---------------------~~~~~   94 (146)
T COG0071          38 TGTPPVDIEETDDEYRITA--ELPGVDKEDIEITVEGNTLTIRGEREEEEEEEE---------------------EGYLR   94 (146)
T ss_pred             CCCCcEEEEEcCCEEEEEE--EcCCCChHHeEEEEECCEEEEEEEecccccccC---------------------CceEE
Confidence            4789999999999999999  999999999999999999999999976332221                     25888


Q ss_pred             eecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCC--CcceEEe
Q 016705           89 NRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAF--DLRNVAM  138 (384)
Q Consensus        89 rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe--~~RrIaI  138 (384)
                      +||.+|+|+|+|+||..|+++.++|+|+| |||+|+|||..++  ..++|+|
T Consensus        95 ~e~~~~~f~r~~~Lp~~v~~~~~~A~~~n-GvL~I~lpk~~~~~~~~~~i~I  145 (146)
T COG0071          95 RERAYGEFERTFRLPEKVDPEVIKAKYKN-GLLTVTLPKAEPEEKKPKRIEI  145 (146)
T ss_pred             EEEEeeeEEEEEECcccccccceeeEeeC-cEEEEEEeccccccccCceeec
Confidence            99999999999999999999999999999 9999999999998  5777776

>PRK10743 heat shock protein IbpA; Provisional

Probab=99.90  E-value=1.7e-23  Score=182.50  Aligned_cols=101  Identities=16%  Similarity=0.232  Sum_probs=88.7

Q ss_pred             CCCeeeEEE-eCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEE
Q 016705           10 PDPVSAIWE-EDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSL   88 (384)
Q Consensus        10 ~~P~VDV~E-TDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~   88 (384)
                      ..|++||++ ++++|+|.|  +|||++|+||+|+++++.|+|+|+++.+.  .+                     .+|++
T Consensus        33 ~~p~~di~ee~~~~~~v~a--elPGv~kedi~V~v~~~~LtI~ge~~~~~--~~---------------------~~~~~   87 (137)
T PRK10743         33 GYPPYNVELVDENHYRIAI--AVAGFAESELEITAQDNLLVVKGAHADEQ--KE---------------------RTYLY   87 (137)
T ss_pred             CCCcEEEEEcCCCEEEEEE--ECCCCCHHHeEEEEECCEEEEEEEECccc--cC---------------------CcEEE
Confidence            349999995 899999999  99999999999999999999999975432  11                     15888


Q ss_pred             eecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeec--CCCCcceEEe
Q 016705           89 NRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQ--RAFDLRNVAM  138 (384)
Q Consensus        89 rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~--epe~~RrIaI  138 (384)
                      +||++|+|+|+|.||++||.+  +|+|+| |||+|++||.  +..++|+|+|
T Consensus        88 ~Er~~g~F~R~~~LP~~Vd~~--~A~~~d-GVL~I~lPK~~~~~~~~r~I~I  136 (137)
T PRK10743         88 QGIAERNFERKFQLAENIHVR--GANLVN-GLLYIDLERVIPEAKKPRRIEI  136 (137)
T ss_pred             EEEECCEEEEEEECCCCcccC--cCEEeC-CEEEEEEeCCCccccCCeEEee
Confidence            999999999999999999999  499999 9999999997  4467788887

>cd06472 ACD_ScHsp26_like Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins

Probab=99.90  E-value=3.8e-23  Score=165.85  Aligned_cols=91  Identities=29%  Similarity=0.374  Sum_probs=81.6

Q ss_pred             eeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECC-EEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeec
Q 016705           13 VSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDG-KLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRP   91 (384)
Q Consensus        13 ~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVddd-vLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rER   91 (384)
                      ++||+|++++|+|.+  +|||++|+||+|+++++ .|+|+|++..+....                     ..+++.+||
T Consensus         1 ~~dv~E~~~~~~i~~--~lPGv~~edi~i~v~~~~~L~I~g~~~~~~~~~---------------------~~~~~~~e~   57 (92)
T cd06472           1 RVDWKETPEAHVFKA--DVPGVKKEDVKVEVEDGRVLRISGERKKEEEKK---------------------GDDWHRVER   57 (92)
T ss_pred             CccEEEcCCeEEEEE--ECCCCChHhEEEEEeCCCEEEEEEEeccccccc---------------------CCCEEEEEE
Confidence            489999999999999  99999999999999875 899999986443211                     126889999


Q ss_pred             ccceEEEEEECCCCcccCcceEEeecCcEEEEEEee
Q 016705           92 NDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKR  127 (384)
Q Consensus        92 s~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK  127 (384)
                      .+|+|+|+|+||.+|++++|+|+|+| |||+|++||
T Consensus        58 ~~g~f~r~i~LP~~v~~~~i~A~~~n-GvL~I~lPK   92 (92)
T cd06472          58 SSGRFVRRFRLPENADADEVKAFLEN-GVLTVTVPK   92 (92)
T ss_pred             eccEEEEEEECCCCCCHHHCEEEEEC-CEEEEEecC
Confidence            99999999999999999999999999 999999998

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. ScHsp26 is temperature-regulated, it switches from an inactive to a chaperone-active form upon elevation in temperature. It associates into large 24-mers storage forms which upon heat shock disassociate into dimers. These dimers initiate the interaction with non-native substrate proteins and re-assemble into large globular assemblies having one monomer of substrate bound per dimer. This group also contains Arabidopsis thaliana (Ath) Hsp15.7, a peroxisomal matrix protein which can complement the morphological phenotype of S. cerevisiae mutants deficient in Hsps26. AthHsp15.7 is minimally expressed under normal conditions and is strongly induced by heat and oxidative st

>cd06471 ACD_LpsHSP_like Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18

Probab=99.88  E-value=2.7e-22  Score=160.31  Aligned_cols=93  Identities=25%  Similarity=0.372  Sum_probs=82.4

Q ss_pred             CeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeec
Q 016705           12 PVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRP   91 (384)
Q Consensus        12 P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rER   91 (384)
                      |++||+|+++.|+|.+  +|||++++||+|+++++.|+|+|+++......+.                   ..+++++||
T Consensus         1 ~~~di~e~~~~~~i~~--~lPGv~~edi~v~~~~~~L~I~g~~~~~~~~~~~-------------------~~~~~~~e~   59 (93)
T cd06471           1 MKTDIKETDDEYIVEA--DLPGFKKEDIKLDYKDGYLTISAKRDESKDEKDK-------------------KGNYIRRER   59 (93)
T ss_pred             CceeEEEcCCEEEEEE--ECCCCCHHHeEEEEECCEEEEEEEEccccccccc-------------------cCCEEEEee
Confidence            5799999999999999  9999999999999999999999999754322111                   115888999


Q ss_pred             ccceEEEEEECCCCcccCcceEEeecCcEEEEEEee
Q 016705           92 NDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKR  127 (384)
Q Consensus        92 s~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK  127 (384)
                      .+|+|+|+|.|| ++++++++|+|+| |+|+|++||
T Consensus        60 ~~g~f~r~~~lp-~v~~~~i~A~~~d-GvL~I~lPK   93 (93)
T cd06471          60 YYGSFSRSFYLP-NVDEEEIKAKYEN-GVLKITLPK   93 (93)
T ss_pred             eccEEEEEEECC-CCCHHHCEEEEEC-CEEEEEEcC
Confidence            999999999999 7999999999999 999999998

5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic me

>cd06470 ACD_IbpA-B_like Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins

Probab=99.86  E-value=3e-21  Score=155.40  Aligned_cols=89  Identities=16%  Similarity=0.276  Sum_probs=79.7

Q ss_pred             CeeeEEEeC-CeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEee
Q 016705           12 PVSAIWEED-ERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNR   90 (384)
Q Consensus        12 P~VDV~ETD-DeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rE   90 (384)
                      |++||+|++ ++|++.+  +|||++|+||+|+++++.|+|+|+++.... ..                     .+|+.+|
T Consensus         1 p~~di~e~~~~~~~v~~--~lPG~~kedi~v~~~~~~L~I~g~~~~~~~-~~---------------------~~~~~~e   56 (90)
T cd06470           1 PPYNIEKTGENNYRITL--AVAGFSEDDLEIEVENNQLTVTGKKADEEN-EE---------------------REYLHRG   56 (90)
T ss_pred             CCeeeEEcCCCeEEEEE--ECCCCCHHHeEEEEECCEEEEEEEEccccc-CC---------------------CcEEEEE
Confidence            789999975 9999999  999999999999999999999999876543 11                     2588899


Q ss_pred             cccceEEEEEECCCCcccCcceEEeecCcEEEEEEee
Q 016705           91 PNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKR  127 (384)
Q Consensus        91 Rs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK  127 (384)
                      |.+|+|+|+|.||.++|.+  +|+|+| |+|+|++|+
T Consensus        57 ~~~g~f~R~~~LP~~vd~~--~A~~~~-GvL~I~l~~   90 (90)
T cd06470          57 IAKRAFERSFNLADHVKVK--GAELEN-GLLTIDLER   90 (90)
T ss_pred             EeceEEEEEEECCCCceEC--eeEEeC-CEEEEEEEC
Confidence            9999999999999999975  899999 999999986

IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. IbpA and IbpB are produced during high-level production of various heterologous proteins, specifically human prorenin, renin and bovine insulin-like growth factor 2 (bIGF-2), and are strongly associated with inclusion bodies containing these heterologous proteins. IbpA and IbpB work as an integrated system to stabilize thermally aggregated proteins in a disaggregation competent state. The chaperone activity of IbpB is also significantly elevated as the temperature increases from normal to heat shock. The high temperature results in the disassociation of 2-3-MDa IbpB oligomers into smaller approximately 6

>PF00011 HSP20: Hsp20/alpha crystallin family This prints entry is a subset of the Pfam entry

Probab=99.85  E-value=8e-21  Score=152.51  Aligned_cols=98  Identities=28%  Similarity=0.432  Sum_probs=80.3

Q ss_pred             eEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccc
Q 016705           15 AIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDG   94 (384)
Q Consensus        15 DV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~G   94 (384)
                      ||.|++++|.|.+  +|||++++||+|+++++.|+|+|++.....  .                     ..+..+|++++
T Consensus         1 di~e~~~~~~i~~--~lpG~~~edi~I~~~~~~L~I~g~~~~~~~--~---------------------~~~~~~~~~~~   55 (102)
T PF00011_consen    1 DIKEDEDEYIIKV--DLPGFDKEDIKIKVDDNKLVISGKRKEEEE--D---------------------DRYYRSERRYG   55 (102)
T ss_dssp             EEEESSSEEEEEE--E-TTS-GGGEEEEEETTEEEEEEEEEGEEC--T---------------------TCEEEE-S-SE
T ss_pred             CeEECCCEEEEEE--ECCCCChHHEEEEEecCccceeceeeeeee--e---------------------eeeeecccccc
Confidence            8999999999998  999999999999999999999999981111  1                     14677899999


Q ss_pred             eEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCC---CcceEEe
Q 016705           95 KIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAF---DLRNVAM  138 (384)
Q Consensus        95 sFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe---~~RrIaI  138 (384)
                      +|.|+|+||.++|+++|+|.|+| |+|+|++||....   ++|+|+|
T Consensus        56 ~f~r~~~lP~~vd~~~i~a~~~~-GvL~I~~pk~~~~~~~~~~~I~I  101 (102)
T PF00011_consen   56 SFERSIRLPEDVDPDKIKASYEN-GVLTITIPKKEEEEDSQPKRIPI  101 (102)
T ss_dssp             EEEEEEE-STTB-GGG-EEEETT-SEEEEEEEBSSSCTTSSSCEE-E
T ss_pred             eEEEEEcCCCcCCcceEEEEecC-CEEEEEEEccccccCCCCeEEEe
Confidence            99999999999999999999999 9999999999987   5788887

; InterPro: IPR002068 Prokaryotic and eukaryotic organisms respond to heat shock or other environmental stress by inducing the synthesis of proteins collectively known as heat-shock proteins (hsp) []. Amongst them is a family of proteins with an average molecular weight of 20 Kd, known as the hsp20 proteins []. These seem to act as chaperones that can protect other proteins against heat-induced denaturation and aggregation. Hsp20 proteins seem to form large heterooligomeric aggregates. Structurally, this family is characterised by the presence of a conserved C-terminal domain of about 100 residues.; PDB: 2BOL_B 3N3E_B 2H50_P 2H53_F 2BYU_L 1GME_D 3VQM_J 3VQK_E 3VQL_A 3AAC_A ....

>cd06497 ACD_alphaA-crystallin_HspB4 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa)

Probab=99.81  E-value=1.3e-19  Score=146.21  Aligned_cols=82  Identities=16%  Similarity=0.285  Sum_probs=71.7

Q ss_pred             eEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccc
Q 016705           15 AIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDG   94 (384)
Q Consensus        15 DV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~G   94 (384)
                      +|+++++.|.|.+  +||||+|+||+|++.++.|+|+|++.....  +.                     .|.++     
T Consensus         4 ~v~e~~~~~~v~~--dlpG~~~edi~V~v~~~~L~I~g~~~~~~~--~~---------------------~~~~~-----   53 (86)
T cd06497           4 EVRSDRDKFTIYL--DVKHFSPEDLTVKVLDDYVEIHGKHSERQD--DH---------------------GYISR-----   53 (86)
T ss_pred             eEEEcCCEEEEEE--ECCCCCHHHeEEEEECCEEEEEEEEcceeC--CC---------------------CEEEE-----
Confidence            7999999999999  999999999999999999999998643221  11                     35555     


Q ss_pred             eEEEEEECCCCcccCcceEEe-ecCcEEEEEEee
Q 016705           95 KIEMNFSLPVGVDPDGFSTSM-DDAGVLTLTFKR  127 (384)
Q Consensus        95 sFsRsI~LPe~VD~dkIkAsL-eNdGVLTITLPK  127 (384)
                      +|+|+|+||++||+++|+|+| +| |||+|++||
T Consensus        54 ef~R~~~LP~~Vd~~~i~A~~~~d-GvL~I~~PK   86 (86)
T cd06497          54 EFHRRYRLPSNVDQSAITCSLSAD-GMLTFSGPK   86 (86)
T ss_pred             EEEEEEECCCCCChHHeEEEeCCC-CEEEEEecC
Confidence            499999999999999999999 68 999999998

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 does not belong to this group. Mutations inHspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). The chaperone-like functions of HspB4 are considered important for maintaining lens transparency and preventing cataract.

>cd06482 ACD_HspB10 Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB10, also known as sperm outer dense fiber protein (ODFP), and similar proteins

Probab=99.80  E-value=2.6e-19  Score=146.15  Aligned_cols=82  Identities=21%  Similarity=0.265  Sum_probs=72.0

Q ss_pred             eCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccceEEE
Q 016705           19 EDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGKIEM   98 (384)
Q Consensus        19 TDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~GsFsR   98 (384)
                      ++++|+|.+  +|||++|+||+|++.++.|+|+|+++...... .                        .+||++|+|+|
T Consensus         6 ~~~~~~v~a--dlPG~~kedI~V~v~~~~L~I~ger~~~~e~~-~------------------------~~er~~g~F~R   58 (87)
T cd06482           6 DSSNVLASV--DVCGFEPDQVKVKVKDGKVQVSAERENRYDCL-G------------------------SKKYSYMNICK   58 (87)
T ss_pred             cCCEEEEEE--ECCCCCHHHeEEEEECCEEEEEEEEecccccC-C------------------------ccEEEEEEEEE
Confidence            578999999  99999999999999999999999987553211 1                        14889999999


Q ss_pred             EEECCCCcccCcceEEeecCcEEEEEEee
Q 016705           99 NFSLPVGVDPDGFSTSMDDAGVLTLTFKR  127 (384)
Q Consensus        99 sI~LPe~VD~dkIkAsLeNdGVLTITLPK  127 (384)
                      +|+||.+||.++|+|+|+|+|||+|.-|.
T Consensus        59 ~f~LP~~Vd~d~i~A~~~~~~~l~i~~~~   87 (87)
T cd06482          59 EFSLPPGVDEKDVTYSYGLGSVVKIETPC   87 (87)
T ss_pred             EEECCCCcChHHcEEEEcCCCEEEEeeCC
Confidence            99999999999999999998899999873

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB10 occurs exclusively in the axoneme of sperm cells and may have a cytoskeletal role.

>cd06478 ACD_HspB4-5-6 Alpha-crystallin domain found in alphaA-crystallin (HspB4), alphaB-crystallin (HspB5), and the small heat shock protein (sHsp) HspB6, also known as Hsp20

Probab=99.79  E-value=5.6e-19  Score=141.28  Aligned_cols=82  Identities=20%  Similarity=0.286  Sum_probs=70.4

Q ss_pred             eEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccc
Q 016705           15 AIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDG   94 (384)
Q Consensus        15 DV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~G   94 (384)
                      +|.+++++|.|.+  +||||+|+||+|++.++.|+|+|++.....  +                     ..|+++     
T Consensus         1 ~~~~~~~~~~v~~--dlpG~~~edI~V~v~~~~L~I~g~~~~~~~--~---------------------~~~~~~-----   50 (83)
T cd06478           1 EVRLDKDRFSVNL--DVKHFSPEELSVKVLGDFVEIHGKHEERQD--E---------------------HGFISR-----   50 (83)
T ss_pred             CeeecCceEEEEE--ECCCCCHHHeEEEEECCEEEEEEEEceEcC--C---------------------CCEEEE-----
Confidence            3678999999999  999999999999999999999998643221  1                     135555     


Q ss_pred             eEEEEEECCCCcccCcceEEe-ecCcEEEEEEee
Q 016705           95 KIEMNFSLPVGVDPDGFSTSM-DDAGVLTLTFKR  127 (384)
Q Consensus        95 sFsRsI~LPe~VD~dkIkAsL-eNdGVLTITLPK  127 (384)
                      +|+|+|+||.+||+++|+|+| +| |||+|++||
T Consensus        51 ef~R~~~LP~~vd~~~i~A~~~~d-GvL~I~~PK   83 (83)
T cd06478          51 EFHRRYRLPPGVDPAAITSSLSAD-GVLTISGPR   83 (83)
T ss_pred             EEEEEEECCCCcChHHeEEEECCC-CEEEEEecC
Confidence            499999999999999999999 58 999999998

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 on the other hand is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. HspB5's functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its ol

>cd06479 ACD_HspB7_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB7, also known as cardiovascular small heat shock protein (cvHsp), and similar proteins

Probab=99.79  E-value=2.8e-19  Score=143.96  Aligned_cols=79  Identities=22%  Similarity=0.313  Sum_probs=71.3

Q ss_pred             eEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccc
Q 016705           15 AIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDG   94 (384)
Q Consensus        15 DV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~G   94 (384)
                      ||.|++++|.|.+  +|||++||||+|+++++.|+|+|+++.+.                               ++.+|
T Consensus         2 ~v~e~~~~~~v~~--dlpG~~pedi~V~v~~~~L~I~ger~~~~-------------------------------~~~~g   48 (81)
T cd06479           2 NVKTLGDTYQFAV--DVSDFSPEDIIVTTSNNQIEVHAEKLASD-------------------------------GTVMN   48 (81)
T ss_pred             CccCcCCeEEEEE--ECCCCCHHHeEEEEECCEEEEEEEEeccC-------------------------------CCEEE
Confidence            7899999999999  99999999999999999999999985221                               12468


Q ss_pred             eEEEEEECCCCcccCcceEEe-ecCcEEEEEEee
Q 016705           95 KIEMNFSLPVGVDPDGFSTSM-DDAGVLTLTFKR  127 (384)
Q Consensus        95 sFsRsI~LPe~VD~dkIkAsL-eNdGVLTITLPK  127 (384)
                      +|+|+|.||.+||+++|+|+| +| |+|+|+++|
T Consensus        49 ~F~R~~~LP~~vd~e~v~A~l~~~-GvL~I~~~~   81 (81)
T cd06479          49 TFTHKCQLPEDVDPTSVSSSLGED-GTLTIKARR   81 (81)
T ss_pred             EEEEEEECCCCcCHHHeEEEecCC-CEEEEEecC
Confidence            999999999999999999998 88 999999986

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB7 is a 25-kDa protein, preferentially expressed in heart and skeletal muscle. It binds the cytoskeleton protein alpha-filamin (also known as actin-binding protein 280). The expression of HspB7 is increased during rat muscle aging. Its expression is also modulated in obesity implicating this protein in this and related metabolic disorders. As the human gene encoding HspB7 is mapped to chromosome 1p36.23-p34.3 it is a positional candidate for several dystrophies and myopathies.

>cd06498 ACD_alphaB-crystallin_HspB5 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaB-crystallin (HspB5, 20kDa)

Probab=99.78  E-value=1.3e-18  Score=140.03  Aligned_cols=82  Identities=18%  Similarity=0.253  Sum_probs=70.1

Q ss_pred             EEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccce
Q 016705           16 IWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGK   95 (384)
Q Consensus        16 V~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~Gs   95 (384)
                      +.+++++|.|.+  +||||+|+||+|++.++.|+|+|++.....  +.                     .++.+     +
T Consensus         2 ~~~~~~~~~v~~--dlpG~~~edi~V~v~~~~L~I~g~~~~~~~--~~---------------------~~~~~-----e   51 (84)
T cd06498           2 MRLEKDKFSVNL--DVKHFSPEELKVKVLGDFIEIHGKHEERQD--EH---------------------GFISR-----E   51 (84)
T ss_pred             eEeCCceEEEEE--ECCCCCHHHeEEEEECCEEEEEEEEcceeC--CC---------------------CEEEE-----E
Confidence            578899999999  999999999999999999999998643221  11                     24444     5


Q ss_pred             EEEEEECCCCcccCcceEEee-cCcEEEEEEeec
Q 016705           96 IEMNFSLPVGVDPDGFSTSMD-DAGVLTLTFKRQ  128 (384)
Q Consensus        96 FsRsI~LPe~VD~dkIkAsLe-NdGVLTITLPK~  128 (384)
                      |+|+|.||.+||+++|+|+|+ | |||+|++||.
T Consensus        52 F~R~~~LP~~vd~~~i~A~~~~d-GvL~I~lPk~   84 (84)
T cd06498          52 FQRKYRIPADVDPLTITSSLSPD-GVLTVCGPRK   84 (84)
T ss_pred             EEEEEECCCCCChHHcEEEeCCC-CEEEEEEeCC
Confidence            999999999999999999996 8 9999999984

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. HspB4 does not belong to this group. HspB5 shows increased synthesis in response to stress. HspB5 is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. Its functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its oligomerization and anti-apoptotic activ

>cd06464 ACD_sHsps-like Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=99.77  E-value=3.3e-18  Score=131.17  Aligned_cols=88  Identities=31%  Similarity=0.501  Sum_probs=79.1

Q ss_pred             eEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccc
Q 016705           15 AIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDG   94 (384)
Q Consensus        15 DV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~G   94 (384)
                      |++|++++|++.+  +|||+++++|+|++.++.|.|+|++........                      .+..+|+.++
T Consensus         1 ~i~e~~~~~~i~~--~lpg~~~~~i~V~v~~~~l~I~g~~~~~~~~~~----------------------~~~~~~~~~~   56 (88)
T cd06464           1 DVYETDDAYVVEA--DLPGFKKEDIKVEVEDGVLTISGEREEEEEEEE----------------------NYLRRERSYG   56 (88)
T ss_pred             CcEEcCCEEEEEE--ECCCCCHHHeEEEEECCEEEEEEEEecccccCC----------------------cEEEEEEeCc
Confidence            5789999999988  999999999999999999999999875543211                      3667889999


Q ss_pred             eEEEEEECCCCcccCcceEEeecCcEEEEEEee
Q 016705           95 KIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKR  127 (384)
Q Consensus        95 sFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK  127 (384)
                      .|.|+|.||..+|+++++|+|+| |+|+|++||
T Consensus        57 ~f~r~~~LP~~vd~~~i~a~~~~-G~L~I~~pk   88 (88)
T cd06464          57 SFSRSFRLPEDVDPDKIKASLEN-GVLTITLPK   88 (88)
T ss_pred             EEEEEEECCCCcCHHHcEEEEeC-CEEEEEEcC
Confidence            99999999999999999999999 999999997

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>cd06475 ACD_HspB1_like Alpha crystallin domain (ACD) found in mammalian small (s)heat shock protein (Hsp)-27 (also denoted HspB1 in human) and similar proteins

Probab=99.76  E-value=3.5e-18  Score=137.93  Aligned_cols=82  Identities=22%  Similarity=0.324  Sum_probs=70.7

Q ss_pred             eeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeeccc
Q 016705           14 SAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPND   93 (384)
Q Consensus        14 VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~   93 (384)
                      -||+|+++.|.|.+  +|||++|+||+|++.++.|+|+|++..+..  +.                     .+.     .
T Consensus         3 ~~i~e~~~~~~v~~--dlPG~~~edi~V~v~~~~L~I~g~~~~~~~--~~---------------------~~~-----~   52 (86)
T cd06475           3 SEIRQTADRWKVSL--DVNHFAPEELVVKTKDGVVEITGKHEEKQD--EH---------------------GFV-----S   52 (86)
T ss_pred             ceEEEcCCeEEEEE--ECCCCCHHHEEEEEECCEEEEEEEECcCcC--CC---------------------CEE-----E
Confidence            48999999999999  999999999999999999999998743211  11                     122     2


Q ss_pred             ceEEEEEECCCCcccCcceEEee-cCcEEEEEEe
Q 016705           94 GKIEMNFSLPVGVDPDGFSTSMD-DAGVLTLTFK  126 (384)
Q Consensus        94 GsFsRsI~LPe~VD~dkIkAsLe-NdGVLTITLP  126 (384)
                      ++|+|+|.||.+||+++|+|+|+ | |||+|++|
T Consensus        53 ~~f~R~f~LP~~vd~~~v~A~~~~d-GvL~I~lP   85 (86)
T cd06475          53 RCFTRKYTLPPGVDPTAVTSSLSPD-GILTVEAP   85 (86)
T ss_pred             EEEEEEEECCCCCCHHHcEEEECCC-CeEEEEec
Confidence            38999999999999999999997 8 99999998

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Hsp27 shows enhanced synthesis in response to stress. It is a molecular chaperone which interacts with a large number of different proteins. It is found in many types of human cells including breast, uterus, cervix, platelets and cancer cells. Hsp27 has diverse cellular functions including, chaperoning, regulation of actin polymerization, keratinocyte differentiation, regulation of inflammatory pathways in keratinocytes, and protection from oxidative stress through modulating glutathione levels. It is also a subunit of AUF1-containing protein complexes. It has been linked to several transduction pathways regulating cellular functions including differentiat

>cd06481 ACD_HspB9_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB9 and similar proteins

Probab=99.75  E-value=4.2e-18  Score=137.70  Aligned_cols=83  Identities=20%  Similarity=0.258  Sum_probs=69.5

Q ss_pred             EeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccceEE
Q 016705           18 EEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGKIE   97 (384)
Q Consensus        18 ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~GsFs   97 (384)
                      +..+.|.|.+  +|||++|+||+|+++++.|+|+|++.........                     .|.   +.+|+|+
T Consensus         4 ~~~d~~~v~~--dlpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~---------------------~~~---~~~~~F~   57 (87)
T cd06481           4 DGKEGFSLKL--DVRGFSPEDLSVRVDGRKLVVTGKREKKNEDEKG---------------------SFS---YEYQEFV   57 (87)
T ss_pred             CccceEEEEE--ECCCCChHHeEEEEECCEEEEEEEEeeecccCCC---------------------cEE---EEeeEEE
Confidence            3467899988  9999999999999999999999998644322111                     232   3478999


Q ss_pred             EEEECCCCcccCcceEEe-ecCcEEEEEEee
Q 016705           98 MNFSLPVGVDPDGFSTSM-DDAGVLTLTFKR  127 (384)
Q Consensus        98 RsI~LPe~VD~dkIkAsL-eNdGVLTITLPK  127 (384)
                      |+|.||.+||.+.|+|+| +| |||+|++|+
T Consensus        58 R~~~LP~~Vd~~~i~A~~~~d-GvL~I~~P~   87 (87)
T cd06481          58 REAQLPEHVDPEAVTCSLSPS-GHLHIRAPR   87 (87)
T ss_pred             EEEECCCCcChHHeEEEeCCC-ceEEEEcCC
Confidence            999999999999999999 88 999999996

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB9 is expressed exclusively in the normal testis and in various tumor samples and is a cancer/testis antigen. hHspB9 interacts with TCTEL1 (T-complex testis expressed protein -1), a subunit of dynein. hHspB9 and TCTEL1 are co-expressed in similar cells within the testis and in tumor cells. Included in this group is Xenopus Hsp30, a developmentally-regulated heat-inducible molecular chaperone.

>cd06476 ACD_HspB2_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB2/heat shock 27kDa protein 2 and similar proteins

Probab=99.75  E-value=7.1e-18  Score=135.87  Aligned_cols=81  Identities=19%  Similarity=0.276  Sum_probs=68.3

Q ss_pred             EEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccce
Q 016705           16 IWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGK   95 (384)
Q Consensus        16 V~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~Gs   95 (384)
                      +.-++++|.|.+  +|||++|+||+|++.++.|+|+|++.....  ..                     .+..     ++
T Consensus         2 ~~~~~d~y~v~~--dlpG~~~edi~V~v~~~~L~I~g~~~~~~~--~~---------------------~~~~-----~e   51 (83)
T cd06476           2 VESEDDKYQVFL--DVCHFTPDEITVRTVDNLLEVSARHPQRMD--RH---------------------GFVS-----RE   51 (83)
T ss_pred             eeccCCeEEEEE--EcCCCCHHHeEEEEECCEEEEEEEEcceec--CC---------------------CEEE-----EE
Confidence            345788999999  999999999999999999999999753221  11                     1333     36


Q ss_pred             EEEEEECCCCcccCcceEEee-cCcEEEEEEee
Q 016705           96 IEMNFSLPVGVDPDGFSTSMD-DAGVLTLTFKR  127 (384)
Q Consensus        96 FsRsI~LPe~VD~dkIkAsLe-NdGVLTITLPK  127 (384)
                      |+|+|.||.+||+++|+|+|+ | |||+|++||
T Consensus        52 F~R~~~LP~~vd~~~v~A~~~~d-GvL~I~~Pr   83 (83)
T cd06476          52 FTRTYILPMDVDPLLVRASLSHD-GILCIQAPR   83 (83)
T ss_pred             EEEEEECCCCCChhhEEEEecCC-CEEEEEecC
Confidence            999999999999999999997 7 999999997

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB2 is preferentially and constitutively expressed in skeletal muscle and heart. HspB2 shows homooligomeric activity and forms aggregates in muscle cytosol. Although its expression is not induced by heat shock, it redistributes to the insoluble fraction in response to heat shock. In the mouse heart, HspB2 plays a role in maintaining energetic balance, by protecting cardiac energetics during ischemia/reperfusion, and allowing for increased work during acute inotropic challenge. hHspB2 [previously also known as myotonic dystrophy protein kinase (DMPK) binding protein (MKBP)] is selectively up-regulated in skeletal muscles from myotonic dystrophy patients.

>cd06526 metazoan_ACD Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=99.74  E-value=4.9e-18  Score=134.27  Aligned_cols=77  Identities=27%  Similarity=0.440  Sum_probs=67.5

Q ss_pred             CeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccceEEEEE
Q 016705           21 ERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGKIEMNF  100 (384)
Q Consensus        21 DeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~GsFsRsI  100 (384)
                      +.|++.+  +||||+++||+|+++++.|+|+|++.....   .                         .++.+++|+|+|
T Consensus         7 ~~~~v~~--dlpG~~~edI~v~v~~~~L~I~g~~~~~~~---~-------------------------~~~~~~~f~r~~   56 (83)
T cd06526           7 EKFQVTL--DVKGFKPEELKVKVSDNKLVVEGKHEERED---E-------------------------HGYVSREFTRRY   56 (83)
T ss_pred             eeEEEEE--ECCCCCHHHcEEEEECCEEEEEEEEeeecc---C-------------------------CCEEEEEEEEEE
Confidence            5899988  999999999999999999999999865432   1                         123457999999


Q ss_pred             ECCCCcccCcceEEeecCcEEEEEEee
Q 016705          101 SLPVGVDPDGFSTSMDDAGVLTLTFKR  127 (384)
Q Consensus       101 ~LPe~VD~dkIkAsLeNdGVLTITLPK  127 (384)
                      +||.+||+++++|+|.|||+|+|++||
T Consensus        57 ~LP~~vd~~~i~A~~~~~GvL~I~~Pk   83 (83)
T cd06526          57 QLPEGVDPDSVTSSLSSDGVLTIEAPK   83 (83)
T ss_pred             ECCCCCChHHeEEEeCCCcEEEEEecC
Confidence            999999999999999988999999997

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>cd06477 ACD_HspB3_Like Alpha crystallin domain (ACD) found in mammalian HspB3, also known as heat-shock protein 27-like protein (HSPL27, 17-kDa) and similar proteins

Probab=99.70  E-value=5.4e-17  Score=131.40  Aligned_cols=79  Identities=20%  Similarity=0.238  Sum_probs=67.2

Q ss_pred             EEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccceE
Q 016705           17 WEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGKI   96 (384)
Q Consensus        17 ~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~GsF   96 (384)
                      .|+++.|+|++  +||||+|+||+|++.++.|+|+|++..+..  +.                     .+..     ++|
T Consensus         3 ~e~~~~~~v~~--dlpG~~~edI~V~v~~~~L~I~ge~~~~~~--~~---------------------~~~~-----r~F   52 (83)
T cd06477           3 EEGKPMFQILL--DVVQFRPEDIIIQVFEGWLLIKGQHGVRMD--EH---------------------GFIS-----RSF   52 (83)
T ss_pred             ccCCceEEEEE--EcCCCCHHHeEEEEECCEEEEEEEEccccC--CC---------------------CEEE-----EEE
Confidence            46889999999  999999999999999999999999865331  11                     1222     289


Q ss_pred             EEEEECCCCcccCcceEEe-ecCcEEEEEEe
Q 016705           97 EMNFSLPVGVDPDGFSTSM-DDAGVLTLTFK  126 (384)
Q Consensus        97 sRsI~LPe~VD~dkIkAsL-eNdGVLTITLP  126 (384)
                      +|+|+||.+|++++|+|+| +| |||+|+.|
T Consensus        53 ~R~~~LP~~Vd~~~v~A~~~~d-GvL~I~~~   82 (83)
T cd06477          53 TRQYQLPDGVEHKDLSAMLCHD-GILVVETK   82 (83)
T ss_pred             EEEEECCCCcchheEEEEEcCC-CEEEEEec
Confidence            9999999999999999998 67 99999976

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB3 is expressed in adult skeletal muscle, smooth muscle, and heart, and in several other fetal tissues. In muscle cells HspB3 forms an oligomeric 150 kDa complex with myotonic dystrophy protein kinase-binding protein (MKBP/ HspB2), this complex may comprise one of two independent muscle-cell specific chaperone systems. The expression of HspB3 is induced during muscle differentiation controlled by the myogenic factor MyoD. HspB3 may also interact with Hsp22 (HspB8).

>KOG0710 consensus Molecular chaperone (small heat-shock protein Hsp26/Hsp42) [Posttranslational modification, protein turnover, chaperones]

Probab=99.59  E-value=2.2e-15  Score=138.01  Aligned_cols=101  Identities=25%  Similarity=0.314  Sum_probs=89.1

Q ss_pred             CCCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECC-EEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceE
Q 016705            9 KPDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDG-KLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSS   87 (384)
Q Consensus         9 ~~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVddd-vLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~   87 (384)
                      ...+++|+.|++++|++.+  ++||+.+++++|+++++ +|+|+|++..+......                   .+.++
T Consensus        82 ~~~~~~~v~e~~~~~~~~~--~~Pgl~ke~iKv~~~~~~~l~isGe~~~e~e~~~~-------------------~~~~~  140 (196)
T KOG0710|consen   82 EARVPWDVKESPDAHEFKV--DLPGLKKEDIKVEVEDEKVLTISGERKKEEEESGS-------------------GKKWK  140 (196)
T ss_pred             cccCCcccccCCCceEEEe--eCCCCCchhceEEeccCcEEEEecccccccccccC-------------------Cccce
Confidence            3567789999999999988  99999999999999987 79999999876653211                   12578


Q ss_pred             EeecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCC
Q 016705           88 LNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAF  131 (384)
Q Consensus        88 ~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe  131 (384)
                      ..|+.+|.|.|+|.||++++.++|+|.|+| |||+|++||..+.
T Consensus       141 ~~E~~~g~F~r~~~lPenv~~d~ikA~~~n-GVL~VvvpK~~~~  183 (196)
T KOG0710|consen  141 RVERKLGKFKRRFELPENVDVDEIKAEMEN-GVLTVVVPKLEPL  183 (196)
T ss_pred             eehhcccceEeeecCCccccHHHHHHHhhC-CeEEEEEeccccc
Confidence            889999999999999999999999999999 9999999999983

>cd06480 ACD_HspB8_like Alpha-crystallin domain (ACD) found in mammalian 21

Probab=99.51  E-value=7.2e-14  Score=115.43  Aligned_cols=86  Identities=16%  Similarity=0.190  Sum_probs=70.8

Q ss_pred             CeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeec
Q 016705           12 PVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRP   91 (384)
Q Consensus        12 P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rER   91 (384)
                      |+=-+..+++.|.|.+  ++.||++|||+|++.++.|+|+|++.....  +.                     .+..   
T Consensus         6 ~~~~~~~~~~~f~v~l--dv~gF~pEDL~Vkv~~~~L~V~Gkh~~~~~--e~---------------------g~~~---   57 (91)
T cd06480           6 PRNPPPNSSEPWKVCV--NVHSFKPEELTVKTKDGFVEVSGKHEEQQK--EG---------------------GIVS---   57 (91)
T ss_pred             ccCCCCCCCCcEEEEE--EeCCCCHHHcEEEEECCEEEEEEEECcccC--CC---------------------CEEE---
Confidence            3334567888999988  999999999999999999999999864432  11                     1222   


Q ss_pred             ccceEEEEEECCCCcccCcceEEeecCcEEEEEEee
Q 016705           92 NDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKR  127 (384)
Q Consensus        92 s~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK  127 (384)
                        ++|+|+|.||.+||++.|+|+|..||+|+|++|.
T Consensus        58 --r~F~R~~~LP~~Vd~~~v~s~l~~dGvL~IeaP~   91 (91)
T cd06480          58 --KNFTKKIQLPPEVDPVTVFASLSPEGLLIIEAPQ   91 (91)
T ss_pred             --EEEEEEEECCCCCCchhEEEEeCCCCeEEEEcCC
Confidence              4899999999999999999999955999999983

6 KDa small heat shock protein (sHsp) HspB8, also denoted as Hsp22 in humans, and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. A chaperone complex formed of HspB8 and Bag3 stimulates degradation of protein complexes by macroautophagy. HspB8 also forms complexes with Hsp27 (HspB1), MKBP (HspB2), HspB3, alphaB-crystallin (HspB5), Hsp20 (HspB6), and cvHsp (HspB7). These latter interactions may depend on phosphorylation of the respective partner sHsp. HspB8 may participate in the regulation of cell proliferation, cardiac hypertrophy, apoptosis, and carcinogenesis. Point mutations in HspB8 have been correlated with the development of several congenital neurological diseases, including Charcot Marie tooth disease and distal motor neuropathy type II.

>KOG3591 consensus Alpha crystallins [Posttranslational modification, protein turnover, chaperones]

Probab=99.37  E-value=4.2e-12  Score=115.44  Aligned_cols=99  Identities=17%  Similarity=0.240  Sum_probs=84.4

Q ss_pred             CeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeec
Q 016705           12 PVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRP   91 (384)
Q Consensus        12 P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rER   91 (384)
                      ...++..+++.|.|.+  |+..|+||+|+|.+.++.|.|.|+......  +.                     -+..|  
T Consensus        63 ~~~~~~~~~~~F~V~l--DV~~F~PeEl~Vk~~~~~l~V~gkHeer~d--~~---------------------G~v~R--  115 (173)
T KOG3591|consen   63 GASEIVNDKDKFEVNL--DVHQFKPEELKVKTDDNTLEVEGKHEEKED--EH---------------------GYVSR--  115 (173)
T ss_pred             cccccccCCCcEEEEE--EcccCcccceEEEeCCCEEEEEeeeccccC--CC---------------------CeEEE--
Confidence            3567888999999988  999999999999999999999998765542  11                     13333  


Q ss_pred             ccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCCC--cceEEecc
Q 016705           92 NDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFD--LRNVAMGW  140 (384)
Q Consensus        92 s~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe~--~RrIaIg~  140 (384)
                         +|.|++.||.+||++.|+++|.+||+|+|+.||.+..+  .|.|+|-.
T Consensus       116 ---~F~R~y~LP~~vdp~~V~S~LS~dGvLtI~ap~~~~~~~~er~ipI~~  163 (173)
T KOG3591|consen  116 ---SFVRKYLLPEDVDPTSVTSTLSSDGVLTIEAPKPPPKQDNERSIPIEQ  163 (173)
T ss_pred             ---EEEEEecCCCCCChhheEEeeCCCceEEEEccCCCCcCccceEEeEee
Confidence               79999999999999999999999999999999999775  78888853

>cd00298 ACD_sHsps_p23-like This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins

Probab=99.37  E-value=3.9e-12  Score=92.85  Aligned_cols=80  Identities=29%  Similarity=0.510  Sum_probs=69.6

Q ss_pred             EEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccce
Q 016705           16 IWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGK   95 (384)
Q Consensus        16 V~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~Gs   95 (384)
                      ++++++.+.+++  ++||+.+++++|++.++.|+|+|++.....                             .+...+.
T Consensus         1 ~~q~~~~v~i~i--~~~~~~~~~i~v~~~~~~l~v~~~~~~~~~-----------------------------~~~~~~~   49 (80)
T cd00298           1 WYQTDDEVVVTV--DLPGVKKEDIKVEVEDNVLTISGKREEEEE-----------------------------RERSYGE   49 (80)
T ss_pred             CEEcCCEEEEEE--ECCCCCHHHeEEEEECCEEEEEEEEcCCCc-----------------------------ceEeeee
Confidence            468889999988  999999999999999999999998753322                             1233458


Q ss_pred             EEEEEECCCCcccCcceEEeecCcEEEEEEee
Q 016705           96 IEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKR  127 (384)
Q Consensus        96 FsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK  127 (384)
                      |.+.+.||..+++++++|++.+ |+|+|++||
T Consensus        50 ~~~~~~L~~~i~~~~~~~~~~~-~~l~i~l~K   80 (80)
T cd00298          50 FERSFELPEDVDPEKSKASLEN-GVLEITLPK   80 (80)
T ss_pred             EEEEEECCCCcCHHHCEEEEEC-CEEEEEEcC
Confidence            9999999999999999999999 999999997

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind

>cd06481 ACD_HspB9_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB9 and similar proteins

Probab=99.29  E-value=1.6e-11  Score=99.53  Aligned_cols=85  Identities=27%  Similarity=0.357  Sum_probs=65.9

Q ss_pred             CCCceEEEEEeec-ccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeE
Q 016705          146 SKKGFVDFKAYLA-AGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVL  224 (384)
Q Consensus       146 ~~~g~~~~~~~~~-~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~  224 (384)
                      ++.|+=++++.++ |||++|||.|.++.|.++|+|.+++.+.+.....--.+++|.|+|.+|+.||+-.++|++-.||||
T Consensus         2 ~~~~~d~~~v~~dlpG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~~~~~~F~R~~~LP~~Vd~~~i~A~~~~dGvL   81 (87)
T cd06481           2 GKDGKEGFSLKLDVRGFSPEDLSVRVDGRKLVVTGKREKKNEDEKGSFSYEYQEFVREAQLPEHVDPEAVTCSLSPSGHL   81 (87)
T ss_pred             CCCccceEEEEEECCCCChHHeEEEEECCEEEEEEEEeeecccCCCcEEEEeeEEEEEEECCCCcChHHeEEEeCCCceE
Confidence            4566655555555 699999999999999999999866543222111111248899999999999999999999999999


Q ss_pred             EEEehh
Q 016705          225 TLTFKR  230 (384)
Q Consensus       225 ~~~~~~  230 (384)
                      +++.-|
T Consensus        82 ~I~~P~   87 (87)
T cd06481          82 HIRAPR   87 (87)
T ss_pred             EEEcCC
Confidence            998654

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB9 is expressed exclusively in the normal testis and in various tumor samples and is a cancer/testis antigen. hHspB9 interacts with TCTEL1 (T-complex testis expressed protein -1), a subunit of dynein. hHspB9 and TCTEL1 are co-expressed in similar cells within the testis and in tumor cells. Included in this group is Xenopus Hsp30, a developmentally-regulated heat-inducible molecular chaperone.

>cd06480 ACD_HspB8_like Alpha-crystallin domain (ACD) found in mammalian 21

Probab=99.24  E-value=2.3e-11  Score=100.64  Aligned_cols=72  Identities=24%  Similarity=0.372  Sum_probs=58.6

Q ss_pred             EEEeec-ccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEe
Q 016705          153 FKAYLA-AGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTF  228 (384)
Q Consensus       153 ~~~~~~-~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~  228 (384)
                      ++|.|| .+|++|||+|.++.|+++|+|+|..++.++.  .  +..+|.|+|.+|+.|||..++|++..+|+|+++.
T Consensus        17 f~v~ldv~gF~pEDL~Vkv~~~~L~V~Gkh~~~~~e~g--~--~~r~F~R~~~LP~~Vd~~~v~s~l~~dGvL~Iea   89 (91)
T cd06480          17 WKVCVNVHSFKPEELTVKTKDGFVEVSGKHEEQQKEGG--I--VSKNFTKKIQLPPEVDPVTVFASLSPEGLLIIEA   89 (91)
T ss_pred             EEEEEEeCCCCHHHcEEEEECCEEEEEEEECcccCCCC--E--EEEEEEEEEECCCCCCchhEEEEeCCCCeEEEEc
Confidence            334443 6999999999999999999999776543322  1  2367779999999999999999999999999864

6 KDa small heat shock protein (sHsp) HspB8, also denoted as Hsp22 in humans, and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. A chaperone complex formed of HspB8 and Bag3 stimulates degradation of protein complexes by macroautophagy. HspB8 also forms complexes with Hsp27 (HspB1), MKBP (HspB2), HspB3, alphaB-crystallin (HspB5), Hsp20 (HspB6), and cvHsp (HspB7). These latter interactions may depend on phosphorylation of the respective partner sHsp. HspB8 may participate in the regulation of cell proliferation, cardiac hypertrophy, apoptosis, and carcinogenesis. Point mutations in HspB8 have been correlated with the development of several congenital neurological diseases, including Charcot Marie tooth disease and distal motor neuropathy type II.

>cd06498 ACD_alphaB-crystallin_HspB5 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaB-crystallin (HspB5, 20kDa)

Probab=99.14  E-value=2e-10  Score=92.75  Aligned_cols=76  Identities=22%  Similarity=0.239  Sum_probs=61.2

Q ss_pred             EEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEehh
Q 016705          151 VDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFKR  230 (384)
Q Consensus       151 ~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~~~  230 (384)
                      +.|++.| ||+++|||.|.++.|.+.|+|.+.. +.+. .  ..++.+|.|+|.+|+.|||=.++|++..||||+++..|
T Consensus         9 ~~v~~dl-pG~~~edi~V~v~~~~L~I~g~~~~-~~~~-~--~~~~~eF~R~~~LP~~vd~~~i~A~~~~dGvL~I~lPk   83 (84)
T cd06498           9 FSVNLDV-KHFSPEELKVKVLGDFIEIHGKHEE-RQDE-H--GFISREFQRKYRIPADVDPLTITSSLSPDGVLTVCGPR   83 (84)
T ss_pred             EEEEEEC-CCCCHHHeEEEEECCEEEEEEEEcc-eeCC-C--CEEEEEEEEEEECCCCCChHHcEEEeCCCCEEEEEEeC
Confidence            5555655 9999999999999999999997533 2221 1  12446677999999999999999999999999999876


Q ss_pred             h
Q 016705          231 L  231 (384)
Q Consensus       231 ~  231 (384)
                      +
T Consensus        84 ~   84 (84)
T cd06498          84 K   84 (84)
T ss_pred             C
Confidence            3

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. HspB4 does not belong to this group. HspB5 shows increased synthesis in response to stress. HspB5 is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. Its functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its oligomerization and anti-apoptotic activ

>cd06479 ACD_HspB7_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB7, also known as cardiovascular small heat shock protein (cvHsp), and similar proteins

Probab=99.09  E-value=1.6e-10  Score=93.35  Aligned_cols=72  Identities=21%  Similarity=0.342  Sum_probs=59.6

Q ss_pred             EEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEehh
Q 016705          151 VDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFKR  230 (384)
Q Consensus       151 ~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~~~  230 (384)
                      +.|++-| |+|++|||+|.|+.|.+.|+|..+  ..++     .+.+.|.|+|.+|+.|||=.++|++..|||||++..|
T Consensus        10 ~~v~~dl-pG~~pedi~V~v~~~~L~I~ger~--~~~~-----~~~g~F~R~~~LP~~vd~e~v~A~l~~~GvL~I~~~~   81 (81)
T cd06479          10 YQFAVDV-SDFSPEDIIVTTSNNQIEVHAEKL--ASDG-----TVMNTFTHKCQLPEDVDPTSVSSSLGEDGTLTIKARR   81 (81)
T ss_pred             EEEEEEC-CCCCHHHeEEEEECCEEEEEEEEe--ccCC-----CEEEEEEEEEECCCCcCHHHeEEEecCCCEEEEEecC
Confidence            4444433 799999999999999999999632  2221     2448999999999999999999999999999999876

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB7 is a 25-kDa protein, preferentially expressed in heart and skeletal muscle. It binds the cytoskeleton protein alpha-filamin (also known as actin-binding protein 280). The expression of HspB7 is increased during rat muscle aging. Its expression is also modulated in obesity implicating this protein in this and related metabolic disorders. As the human gene encoding HspB7 is mapped to chromosome 1p36.23-p34.3 it is a positional candidate for several dystrophies and myopathies.

>cd06478 ACD_HspB4-5-6 Alpha-crystallin domain found in alphaA-crystallin (HspB4), alphaB-crystallin (HspB5), and the small heat shock protein (sHsp) HspB6, also known as Hsp20

Probab=99.08  E-value=6e-10  Score=89.36  Aligned_cols=75  Identities=23%  Similarity=0.271  Sum_probs=60.0

Q ss_pred             eEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEeh
Q 016705          150 FVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFK  229 (384)
Q Consensus       150 ~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~~  229 (384)
                      .+.|++.| |||++|||.|.++.|.+.|+|.+.. +.++. .  .++.+|.|+|.+|+.|||=.++|++..||||+++..
T Consensus         8 ~~~v~~dl-pG~~~edI~V~v~~~~L~I~g~~~~-~~~~~-~--~~~~ef~R~~~LP~~vd~~~i~A~~~~dGvL~I~~P   82 (83)
T cd06478           8 RFSVNLDV-KHFSPEELSVKVLGDFVEIHGKHEE-RQDEH-G--FISREFHRRYRLPPGVDPAAITSSLSADGVLTISGP   82 (83)
T ss_pred             eEEEEEEC-CCCCHHHeEEEEECCEEEEEEEEce-EcCCC-C--EEEEEEEEEEECCCCcChHHeEEEECCCCEEEEEec
Confidence            35666766 8999999999999999999997432 22211 1  134567799999999999999999999999999864

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 on the other hand is also expressed constitutively in other tissues including brain, heart, and type I and type IIa skeletal muscle fibers, and in several cancers including gliomas, renal cell carcinomas, basal-like and metaplastic breast carcinomas, and head and neck cancer. HspB5's functions include effects on the apoptotic pathway and on metastasis. Phosphorylation of HspB5 reduces its ol

>cd06476 ACD_HspB2_like Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB2/heat shock 27kDa protein 2 and similar proteins

Probab=99.07  E-value=3.2e-10  Score=91.61  Aligned_cols=69  Identities=14%  Similarity=0.238  Sum_probs=57.0

Q ss_pred             cccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEehh
Q 016705          158 AAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFKR  230 (384)
Q Consensus       158 ~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~~~  230 (384)
                      -|||++|||.|.++.|.+.|+|.+.. +.++.. .  ++.+|.|+|.+|+.|||-.++|++..+|||+++.-|
T Consensus        15 lpG~~~edi~V~v~~~~L~I~g~~~~-~~~~~~-~--~~~eF~R~~~LP~~vd~~~v~A~~~~dGvL~I~~Pr   83 (83)
T cd06476          15 VCHFTPDEITVRTVDNLLEVSARHPQ-RMDRHG-F--VSREFTRTYILPMDVDPLLVRASLSHDGILCIQAPR   83 (83)
T ss_pred             cCCCCHHHeEEEEECCEEEEEEEEcc-eecCCC-E--EEEEEEEEEECCCCCChhhEEEEecCCCEEEEEecC
Confidence            38999999999999999999998643 222211 1  336778999999999999999999999999998754

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB2 is preferentially and constitutively expressed in skeletal muscle and heart. HspB2 shows homooligomeric activity and forms aggregates in muscle cytosol. Although its expression is not induced by heat shock, it redistributes to the insoluble fraction in response to heat shock. In the mouse heart, HspB2 plays a role in maintaining energetic balance, by protecting cardiac energetics during ischemia/reperfusion, and allowing for increased work during acute inotropic challenge. hHspB2 [previously also known as myotonic dystrophy protein kinase (DMPK) binding protein (MKBP)] is selectively up-regulated in skeletal muscles from myotonic dystrophy patients.

>cd06469 p23_DYX1C1_like p23_like domain found in proteins similar to dyslexia susceptibility 1 (DYX1) candidate 1 (C1) protein, DYX1C1

Probab=99.05  E-value=1.1e-09  Score=84.09  Aligned_cols=72  Identities=22%  Similarity=0.249  Sum_probs=65.1

Q ss_pred             EEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccce
Q 016705           16 IWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGK   95 (384)
Q Consensus        16 V~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~Gs   95 (384)
                      ++++++.+.|++  ++||+++++++|+++++.|.|++         .                                .
T Consensus         1 W~Qt~~~v~i~i--~~p~v~~~~v~v~~~~~~l~i~~---------~--------------------------------~   37 (78)
T cd06469           1 WSQTDEDVKISV--PLKGVKTSKVDIFCSDLYLKVNF---------P--------------------------------P   37 (78)
T ss_pred             CcccCCEEEEEE--EeCCCccccceEEEecCEEEEcC---------C--------------------------------C
Confidence            367888998887  99999999999999999999976         1                                3


Q ss_pred             EEEEEECCCCcccCcceEEeecCcEEEEEEeecCCC
Q 016705           96 IEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAF  131 (384)
Q Consensus        96 FsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe  131 (384)
                      |.+.+.||..|++++.+|++.+ |.|.|++||..+.
T Consensus        38 ~~~~~~l~~~I~~e~~~~~~~~-~~l~i~L~K~~~~   72 (78)
T cd06469          38 YLFELDLAAPIDDEKSSAKIGN-GVLVFTLVKKEPG   72 (78)
T ss_pred             EEEEEeCcccccccccEEEEeC-CEEEEEEEeCCCC
Confidence            8899999999999999999999 9999999998764

The human gene encoding this protein is a positional candidate gene for developmental dyslexia (DD), it is located on 15q21.3 by the DYX1 DD susceptibility locus (15q15-21). Independent association studies have reported conflicting results. However, association of short-term memory, which plays a role in DD, with a variant within the DYX1C1 gene has been reported. Most proteins belonging to this group contain a C-terminal tetratricopeptide repeat (TPR) protein binding region.

>cd06475 ACD_HspB1_like Alpha crystallin domain (ACD) found in mammalian small (s)heat shock protein (Hsp)-27 (also denoted HspB1 in human) and similar proteins

Probab=98.97  E-value=1.1e-09  Score=88.52  Aligned_cols=73  Identities=26%  Similarity=0.351  Sum_probs=58.8

Q ss_pred             EEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEe
Q 016705          151 VDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTF  228 (384)
Q Consensus       151 ~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~  228 (384)
                      +.+++.| |||++|||.|.++.|.++|+|.++.++.+ .. .  ++..|.|+|.+|+.|||=.++|++..||||+++.
T Consensus        12 ~~v~~dl-PG~~~edi~V~v~~~~L~I~g~~~~~~~~-~~-~--~~~~f~R~f~LP~~vd~~~v~A~~~~dGvL~I~l   84 (86)
T cd06475          12 WKVSLDV-NHFAPEELVVKTKDGVVEITGKHEEKQDE-HG-F--VSRCFTRKYTLPPGVDPTAVTSSLSPDGILTVEA   84 (86)
T ss_pred             EEEEEEC-CCCCHHHEEEEEECCEEEEEEEECcCcCC-CC-E--EEEEEEEEEECCCCCCHHHcEEEECCCCeEEEEe
Confidence            4444443 89999999999999999999986543222 21 1  3467889999999999999999999999999986

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Hsp27 shows enhanced synthesis in response to stress. It is a molecular chaperone which interacts with a large number of different proteins. It is found in many types of human cells including breast, uterus, cervix, platelets and cancer cells. Hsp27 has diverse cellular functions including, chaperoning, regulation of actin polymerization, keratinocyte differentiation, regulation of inflammatory pathways in keratinocytes, and protection from oxidative stress through modulating glutathione levels. It is also a subunit of AUF1-containing protein complexes. It has been linked to several transduction pathways regulating cellular functions including differentiat

>cd06526 metazoan_ACD Alpha-crystallin domain (ACD) of metazoan alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=98.95  E-value=1.8e-09  Score=85.46  Aligned_cols=74  Identities=24%  Similarity=0.399  Sum_probs=60.0

Q ss_pred             EEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEeh
Q 016705          151 VDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFK  229 (384)
Q Consensus       151 ~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~~  229 (384)
                      +.+++.| |||++|||.|.++.|++.|+|..+.. .+  ... ..+++|.|+|.+|+.|||=.++|++.++|+|+++..
T Consensus         9 ~~v~~dl-pG~~~edI~v~v~~~~L~I~g~~~~~-~~--~~~-~~~~~f~r~~~LP~~vd~~~i~A~~~~~GvL~I~~P   82 (83)
T cd06526           9 FQVTLDV-KGFKPEELKVKVSDNKLVVEGKHEER-ED--EHG-YVSREFTRRYQLPEGVDPDSVTSSLSSDGVLTIEAP   82 (83)
T ss_pred             EEEEEEC-CCCCHHHcEEEEECCEEEEEEEEeee-cc--CCC-EEEEEEEEEEECCCCCChHHeEEEeCCCcEEEEEec
Confidence            5566665 58999999999999999999974432 22  111 234788899999999999999999999999999864

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>cd06497 ACD_alphaA-crystallin_HspB4 Alpha-crystallin domain found in the small heat shock protein (sHsp) alphaA-crystallin (HspB4, 20kDa)

Probab=98.93  E-value=2.3e-09  Score=86.82  Aligned_cols=74  Identities=20%  Similarity=0.218  Sum_probs=58.4

Q ss_pred             EEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEeh
Q 016705          151 VDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFK  229 (384)
Q Consensus       151 ~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~~  229 (384)
                      +.|++.| ||+++|||.|.++.|.+.|+|.+.. ++++ ..  .++.+|.|+|.+|+.|||=.++|++..||||+++..
T Consensus        12 ~~v~~dl-pG~~~edi~V~v~~~~L~I~g~~~~-~~~~-~~--~~~~ef~R~~~LP~~Vd~~~i~A~~~~dGvL~I~~P   85 (86)
T cd06497          12 FTIYLDV-KHFSPEDLTVKVLDDYVEIHGKHSE-RQDD-HG--YISREFHRRYRLPSNVDQSAITCSLSADGMLTFSGP   85 (86)
T ss_pred             EEEEEEC-CCCCHHHeEEEEECCEEEEEEEEcc-eeCC-CC--EEEEEEEEEEECCCCCChHHeEEEeCCCCEEEEEec
Confidence            4444433 8999999999999999999998533 2221 11  134567799999999999999999999999999864

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Alpha crystallin, an abundant protein in the mammalian lens, is a large (700 kDa) heteropolymer composed of HspB4 and HspB5, generally in a molar ratio of HspB4:HspB5 of 3:1. Only trace amounts of HspB4 are found in tissues other than the lens. HspB5 does not belong to this group. Mutations inHspB4 have been associated with Autosomal Dominant Congenital Cataract (ADCC). The chaperone-like functions of HspB4 are considered important for maintaining lens transparency and preventing cataract.

>cd06477 ACD_HspB3_Like Alpha crystallin domain (ACD) found in mammalian HspB3, also known as heat-shock protein 27-like protein (HSPL27, 17-kDa) and similar proteins

Probab=98.90  E-value=4.7e-09  Score=85.31  Aligned_cols=74  Identities=20%  Similarity=0.302  Sum_probs=58.6

Q ss_pred             EEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEeh
Q 016705          151 VDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFK  229 (384)
Q Consensus       151 ~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~~  229 (384)
                      +.|++.| |||++|||.|.++.|.+.|+|.++... +... .  ++..|.|+|.+|+.||+=.++|++-.||||+++-|
T Consensus         9 ~~v~~dl-pG~~~edI~V~v~~~~L~I~ge~~~~~-~~~~-~--~~r~F~R~~~LP~~Vd~~~v~A~~~~dGvL~I~~~   82 (83)
T cd06477           9 FQILLDV-VQFRPEDIIIQVFEGWLLIKGQHGVRM-DEHG-F--ISRSFTRQYQLPDGVEHKDLSAMLCHDGILVVETK   82 (83)
T ss_pred             EEEEEEc-CCCCHHHeEEEEECCEEEEEEEEcccc-CCCC-E--EEEEEEEEEECCCCcchheEEEEEcCCCEEEEEec
Confidence            4444443 899999999999999999999754422 2211 1  23578899999999999999999999999999864

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. HspB3 is expressed in adult skeletal muscle, smooth muscle, and heart, and in several other fetal tissues. In muscle cells HspB3 forms an oligomeric 150 kDa complex with myotonic dystrophy protein kinase-binding protein (MKBP/ HspB2), this complex may comprise one of two independent muscle-cell specific chaperone systems. The expression of HspB3 is induced during muscle differentiation controlled by the myogenic factor MyoD. HspB3 may also interact with Hsp22 (HspB8).

>cd06482 ACD_HspB10 Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB10, also known as sperm outer dense fiber protein (ODFP), and similar proteins

Probab=98.87  E-value=9.9e-09  Score=84.15  Aligned_cols=75  Identities=17%  Similarity=0.160  Sum_probs=61.2

Q ss_pred             EEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEE
Q 016705          151 VDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLT  227 (384)
Q Consensus       151 ~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~  227 (384)
                      +.|++-| ||+++|||.|.|+.|.+.|+|..+..+.+.....+ +++.|.|+|.+|+.||+=.++|++.+.|||++.
T Consensus        10 ~~v~adl-PG~~kedI~V~v~~~~L~I~ger~~~~e~~~~~er-~~g~F~R~f~LP~~Vd~d~i~A~~~~~~~l~i~   84 (87)
T cd06482          10 VLASVDV-CGFEPDQVKVKVKDGKVQVSAERENRYDCLGSKKY-SYMNICKEFSLPPGVDEKDVTYSYGLGSVVKIE   84 (87)
T ss_pred             EEEEEEC-CCCCHHHeEEEEECCEEEEEEEEecccccCCccEE-EEEEEEEEEECCCCcChHHcEEEEcCCCEEEEe
Confidence            6666655 79999999999999999999985443322233344 449999999999999999999999999999984

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Human (h) HspB10 occurs exclusively in the axoneme of sperm cells and may have a cytoskeletal role.

>KOG3591 consensus Alpha crystallins [Posttranslational modification, protein turnover, chaperones]

Probab=98.82  E-value=1.1e-08  Score=93.15  Aligned_cols=87  Identities=25%  Similarity=0.402  Sum_probs=71.8

Q ss_pred             ccccccCCCCce-EEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEE
Q 016705          139 GWEHAKDSKKGF-VDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTS  217 (384)
Q Consensus       139 g~~~~~~~~~g~-~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~  217 (384)
                      |.......++|| |.+.|   .-|+||+|.|.++.|.++|.|+|..++.++...+|    +|.|.|.+|++|||-+|+++
T Consensus        63 ~~~~~~~~~~~F~V~lDV---~~F~PeEl~Vk~~~~~l~V~gkHeer~d~~G~v~R----~F~R~y~LP~~vdp~~V~S~  135 (173)
T KOG3591|consen   63 GASEIVNDKDKFEVNLDV---HQFKPEELKVKTDDNTLEVEGKHEEKEDEHGYVSR----SFVRKYLLPEDVDPTSVTST  135 (173)
T ss_pred             cccccccCCCcEEEEEEc---ccCcccceEEEeCCCEEEEEeeeccccCCCCeEEE----EEEEEecCCCCCChhheEEe
Confidence            444455566666 55444   47999999999999999999999988777777774    56899999999999999999


Q ss_pred             EecceeEEEEehhhc
Q 016705          218 MDDAGVLTLTFKRLM  232 (384)
Q Consensus       218 ~~d~~~~~~~~~~~~  232 (384)
                      |.-.|+||+.-...-
T Consensus       136 LS~dGvLtI~ap~~~  150 (173)
T KOG3591|consen  136 LSSDGVLTIEAPKPP  150 (173)
T ss_pred             eCCCceEEEEccCCC
Confidence            999999999866543

>PF00011 HSP20: Hsp20/alpha crystallin family This prints entry is a subset of the Pfam entry

Probab=98.77  E-value=3.6e-08  Score=79.33  Aligned_cols=78  Identities=32%  Similarity=0.472  Sum_probs=55.4

Q ss_pred             eEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcce---eeeccccceEeeCCCccCcceeeEEEecceeEEE
Q 016705          150 FVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSV---KQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTL  226 (384)
Q Consensus       150 ~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~---k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~  226 (384)
                      .+.+++.| ||+.+|||.|.++.|.++|+|... .+.+.....   ..+ +.|.|+|.+|+.+|+-.++|.+ .||+|++
T Consensus         8 ~~~i~~~l-pG~~~edi~I~~~~~~L~I~g~~~-~~~~~~~~~~~~~~~-~~f~r~~~lP~~vd~~~i~a~~-~~GvL~I   83 (102)
T PF00011_consen    8 EYIIKVDL-PGFDKEDIKIKVDDNKLVISGKRK-EEEEDDRYYRSERRY-GSFERSIRLPEDVDPDKIKASY-ENGVLTI   83 (102)
T ss_dssp             EEEEEEE--TTS-GGGEEEEEETTEEEEEEEEE-GEECTTCEEEE-S-S-EEEEEEEE-STTB-GGG-EEEE-TTSEEEE
T ss_pred             EEEEEEEC-CCCChHHEEEEEecCccceeceee-eeeeeeeeeeccccc-ceEEEEEcCCCcCCcceEEEEe-cCCEEEE
Confidence            34444544 599999999999999999999866 222222221   112 5778999999999999999999 9999999


Q ss_pred             Eehhh
Q 016705          227 TFKRL  231 (384)
Q Consensus       227 ~~~~~  231 (384)
                      ++.+.
T Consensus        84 ~~pk~   88 (102)
T PF00011_consen   84 TIPKK   88 (102)
T ss_dssp             EEEBS
T ss_pred             EEEcc
Confidence            97654

; InterPro: IPR002068 Prokaryotic and eukaryotic organisms respond to heat shock or other environmental stress by inducing the synthesis of proteins collectively known as heat-shock proteins (hsp) []. Amongst them is a family of proteins with an average molecular weight of 20 Kd, known as the hsp20 proteins []. These seem to act as chaperones that can protect other proteins against heat-induced denaturation and aggregation. Hsp20 proteins seem to form large heterooligomeric aggregates. Structurally, this family is characterised by the presence of a conserved C-terminal domain of about 100 residues.; PDB: 2BOL_B 3N3E_B 2H50_P 2H53_F 2BYU_L 1GME_D 3VQM_J 3VQK_E 3VQL_A 3AAC_A ....

>cd06463 p23_like Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1

Probab=98.72  E-value=1.2e-07  Score=71.51  Aligned_cols=75  Identities=13%  Similarity=0.193  Sum_probs=66.0

Q ss_pred             EEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccceE
Q 016705           17 WEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGKI   96 (384)
Q Consensus        17 ~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~GsF   96 (384)
                      +++++.+.|.+  .+||+.+++++|.++++.|+|++...      ..                              +.|
T Consensus         2 ~Q~~~~v~i~v--~~~~~~~~~~~v~~~~~~l~i~~~~~------~~------------------------------~~~   43 (84)
T cd06463           2 YQTLDEVTITI--PLKDVTKKDVKVEFTPKSLTVSVKGG------GG------------------------------KEY   43 (84)
T ss_pred             cccccEEEEEE--EcCCCCccceEEEEecCEEEEEeeCC------CC------------------------------Cce
Confidence            57888888877  99999999999999999999998642      11                              158


Q ss_pred             EEEEECCCCcccCcceEEeecCcEEEEEEeecCC
Q 016705           97 EMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRA  130 (384)
Q Consensus        97 sRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~ep  130 (384)
                      .+.+.|+..|++++.++++.+ |.|.|+|+|..+
T Consensus        44 ~~~~~L~~~I~~~~s~~~~~~-~~l~i~L~K~~~   76 (84)
T cd06463          44 LLEGELFGPIDPEESKWTVED-RKIEITLKKKEP   76 (84)
T ss_pred             EEeeEccCccchhhcEEEEeC-CEEEEEEEECCC
Confidence            889999999999999999999 999999999887

Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis. Both p23 and Sba1p can regulate telomerase activity. This group includes domains similar to the C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1). Sgt1 interacts with multiple protein complexes and has the features of a co-chaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. This group also includes the p23_like domains of

>cd06472 ACD_ScHsp26_like Alpha crystallin domain (ACD) found in Saccharomyces cerevisiae (Sc) small heat shock protein (Hsp)26 and similar proteins

Probab=98.69  E-value=5.3e-08  Score=78.38  Aligned_cols=77  Identities=31%  Similarity=0.415  Sum_probs=57.2

Q ss_pred             eEEEEEeecccCCccceEEEEeCC-eEEEEeeeeeeeccCCc----ceeeeccccceEeeCCCccCcceeeEEEecceeE
Q 016705          150 FVDFKAYLAAGTKIEDLVVVIERG-KYLIVGMLQKKEQEGDT----SVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVL  224 (384)
Q Consensus       150 ~~~~~~~~~~~~k~edl~v~v~~~-~~~v~g~~~k~~~~~~~----~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~  224 (384)
                      .+.+.+.| ||+++|||.|.++.| .+.|+|.....+.....    ..+.| +.|.|+|.+|+.||+=.++|++. ||||
T Consensus        10 ~~~i~~~l-PGv~~edi~i~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~-g~f~r~i~LP~~v~~~~i~A~~~-nGvL   86 (92)
T cd06472          10 AHVFKADV-PGVKKEDVKVEVEDGRVLRISGERKKEEEKKGDDWHRVERSS-GRFVRRFRLPENADADEVKAFLE-NGVL   86 (92)
T ss_pred             eEEEEEEC-CCCChHhEEEEEeCCCEEEEEEEecccccccCCCEEEEEEec-cEEEEEEECCCCCCHHHCEEEEE-CCEE
Confidence            35555555 889999999999976 68899974332211111    12223 78889999999999999999997 5999


Q ss_pred             EEEeh
Q 016705          225 TLTFK  229 (384)
Q Consensus       225 ~~~~~  229 (384)
                      ++++.
T Consensus        87 ~I~lP   91 (92)
T cd06472          87 TVTVP   91 (92)
T ss_pred             EEEec
Confidence            99874

sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. ScHsp26 is temperature-regulated, it switches from an inactive to a chaperone-active form upon elevation in temperature. It associates into large 24-mers storage forms which upon heat shock disassociate into dimers. These dimers initiate the interaction with non-native substrate proteins and re-assemble into large globular assemblies having one monomer of substrate bound per dimer. This group also contains Arabidopsis thaliana (Ath) Hsp15.7, a peroxisomal matrix protein which can complement the morphological phenotype of S. cerevisiae mutants deficient in Hsps26. AthHsp15.7 is minimally expressed under normal conditions and is strongly induced by heat and oxidative st

>cd06464 ACD_sHsps-like Alpha-crystallin domain (ACD) of alpha-crystallin-type small(s) heat shock proteins (Hsps)

Probab=98.68  E-value=6.8e-08  Score=74.05  Aligned_cols=77  Identities=35%  Similarity=0.493  Sum_probs=59.7

Q ss_pred             EEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCC--cceeeeccccceEeeCCCccCcceeeEEEecceeEEEEe
Q 016705          151 VDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGD--TSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTF  228 (384)
Q Consensus       151 ~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~--~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~  228 (384)
                      +.+++.| |++++|||.|.++.++++|+|..........  .+.....++|.|+|.+|+.+|+-.++|++.+ |+|++++
T Consensus         9 ~~i~~~l-pg~~~~~i~V~v~~~~l~I~g~~~~~~~~~~~~~~~~~~~~~f~r~~~LP~~vd~~~i~a~~~~-G~L~I~~   86 (88)
T cd06464           9 YVVEADL-PGFKKEDIKVEVEDGVLTISGEREEEEEEEENYLRRERSYGSFSRSFRLPEDVDPDKIKASLEN-GVLTITL   86 (88)
T ss_pred             EEEEEEC-CCCCHHHeEEEEECCEEEEEEEEecccccCCcEEEEEEeCcEEEEEEECCCCcCHHHcEEEEeC-CEEEEEE
Confidence            4445554 7899999999999999999997554333221  1122234888899999999999999999999 9999987


Q ss_pred             h
Q 016705          229 K  229 (384)
Q Consensus       229 ~  229 (384)
                      .
T Consensus        87 p   87 (88)
T cd06464          87 P   87 (88)
T ss_pred             c
Confidence            5

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is the Alpha-crystallin domain (ACD). sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps.

>PF05455 GvpH: GvpH; InterPro: IPR008633 This family consists of archaeal GvpH proteins which are thought to be involved in gas vesicle synthesis []

Probab=98.57  E-value=4.3e-07  Score=83.82  Aligned_cols=79  Identities=22%  Similarity=0.350  Sum_probs=63.9

Q ss_pred             CCCeeeEEEeCC-eEEEEEeccCCCCCCCC-eEEEEECC--EEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCc
Q 016705           10 PDPVSAIWEEDE-RSVHFKVFLASGMKQED-VKIVIQDG--KLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDT   85 (384)
Q Consensus        10 ~~P~VDV~ETDD-eyII~A~FDLPGVkKED-IsIeVddd--vLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~   85 (384)
                      ..|.+|+.+.++ +.+|.|  ||||+++++ |+|.++.+  .|+|+..                                
T Consensus        90 ~~~~vdtre~dDge~~VvA--dLPGVs~dd~idV~l~~d~~~L~i~~~--------------------------------  135 (177)
T PF05455_consen   90 ESIHVDTRERDDGELVVVA--DLPGVSDDDAIDVTLDDDEGALTIRVG--------------------------------  135 (177)
T ss_pred             ceeeeeeEecCCCcEEEEE--eCCCCCcccceeeEeecCCceEEEecC--------------------------------
Confidence            467789999777 688999  999999888 99999855  4555321                                


Q ss_pred             eEEeecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCCC
Q 016705           86 SSLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFD  132 (384)
Q Consensus        86 ~~~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe~  132 (384)
                              +.+.+++.||.. +++.++|+|+| |||+|++-+....+
T Consensus       136 --------~~~~krv~L~~~-~~e~~~~t~nN-gILEIri~~~~~~~  172 (177)
T PF05455_consen  136 --------EKYLKRVALPWP-DPEITSATFNN-GILEIRIRRTEESS  172 (177)
T ss_pred             --------CceEeeEecCCC-ccceeeEEEeC-ceEEEEEeecCCCC
Confidence                    136789999977 68899999999 99999999887653

>cd06466 p23_CS_SGT1_like p23_like domain similar to the C-terminal CHORD-SGT1 (CS) domain of Sgt1 (suppressor of G2 allele of Skp1)

Probab=98.37  E-value=1.8e-06  Score=66.84  Aligned_cols=78  Identities=17%  Similarity=0.219  Sum_probs=67.8

Q ss_pred             eEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccc
Q 016705           15 AIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDG   94 (384)
Q Consensus        15 DV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~G   94 (384)
                      |++++++.+.|.+  .+||+.++++.|+++++.|.|+....      .+                              .
T Consensus         1 dW~Qt~~~v~i~v--~~~~~~~~~v~v~~~~~~l~i~~~~~------~~------------------------------~   42 (84)
T cd06466           1 DWYQTDTSVTVTI--YAKNVDKEDVKVEFNEQSLSVSIILP------GG------------------------------S   42 (84)
T ss_pred             CccccCCEEEEEE--EECCCCHHHCEEEEecCEEEEEEECC------CC------------------------------C
Confidence            6889999998877  99999999999999999999987531      11                              1


Q ss_pred             eEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCC
Q 016705           95 KIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAF  131 (384)
Q Consensus        95 sFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe  131 (384)
                      .|...+.|+..|+++..++.+.+ |.|.|+|.|..+.
T Consensus        43 ~~~~~~~L~~~I~~~~s~~~~~~-~~vei~L~K~~~~   78 (84)
T cd06466          43 EYQLELDLFGPIDPEQSKVSVLP-TKVEITLKKAEPG   78 (84)
T ss_pred             eEEEecccccccCchhcEEEEeC-eEEEEEEEcCCCC
Confidence            58888999999999999999999 9999999998763

Sgt1 interacts with multiple protein complexes and has the features of a cochaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. ScSgt1 is needed for the G1/S and G2/M cell-cycle transitions, and for assembly of the core kinetochore complex (CBF3) via activation of Ctf13, the F-box protein. Binding of Hsp82 (a yeast Hsp90 homologue) to ScSgt1, promotes the binding of Sgt1 to Skp1 and of Skp1 to Ctf13. Some proteins in this group have an SGT1-specific (SGS) domain at the extreme C-terminus. The ScSgt1-SGS domain binds adenylate cyclase. The hSgt1-SGS domain interacts with some S100 family proteins, and studies sug

>cd06471 ACD_LpsHSP_like Group of bacterial proteins containing an alpha crystallin domain (ACD) similar to Lactobacillus plantarum (Lp) small heat shock proteins (sHsp) HSP 18

Probab=98.36  E-value=1.1e-06  Score=70.39  Aligned_cols=76  Identities=29%  Similarity=0.372  Sum_probs=56.6

Q ss_pred             eEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCc------ceeeeccccceEeeCCCccCcceeeEEEeccee
Q 016705          150 FVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDT------SVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGV  223 (384)
Q Consensus       150 ~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~------~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~  223 (384)
                      .+.+++.| ||++.|||.|.+++|.+.|+|......++.+.      ..+ .+++|.|+|.+| .||+=.++|++ .|||
T Consensus        11 ~~~i~~~l-PGv~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~~~e~-~~g~f~r~~~lp-~v~~~~i~A~~-~dGv   86 (93)
T cd06471          11 EYIVEADL-PGFKKEDIKLDYKDGYLTISAKRDESKDEKDKKGNYIRRER-YYGSFSRSFYLP-NVDEEEIKAKY-ENGV   86 (93)
T ss_pred             EEEEEEEC-CCCCHHHeEEEEECCEEEEEEEEccccccccccCCEEEEee-eccEEEEEEECC-CCCHHHCEEEE-ECCE
Confidence            35555555 59999999999999999999974332211111      112 236788999999 69999999999 8899


Q ss_pred             EEEEeh
Q 016705          224 LTLTFK  229 (384)
Q Consensus       224 ~~~~~~  229 (384)
                      |++++.
T Consensus        87 L~I~lP   92 (93)
T cd06471          87 LKITLP   92 (93)
T ss_pred             EEEEEc
Confidence            999974

5, HSP 18.55 and HSP 19.3. sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. Transcription of the genes encoding Lp HSP 18.5, 18.55 and 19.3 is regulated by a variety of stresses including heat, cold and ethanol. Early growing L. plantarum cells contain elevated levels of these mRNAs which rapidly fall of as the cells enter stationary phase. Also belonging to this group is Bifidobacterium breve (Bb) HSP20 and Oenococcus oenis (syn. Leuconostoc oenos) (Oo) HSP18. Transcription of the gene encoding BbHSP20 is strongly induced following heat or osmotic shock, and that of the gene encoding OoHSP18 following heat, ethanol or acid shock. OoHSP18 is peripherally associated with the cytoplasmic me

>cd06470 ACD_IbpA-B_like Alpha-crystallin domain (ACD) found in Escherichia coli inclusion body-associated proteins IbpA and IbpB, and similar proteins

Probab=98.27  E-value=2.7e-06  Score=68.80  Aligned_cols=76  Identities=21%  Similarity=0.278  Sum_probs=55.9

Q ss_pred             ceEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcc----eeeeccccceEeeCCCccCcceeeEEEecceeE
Q 016705          149 GFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTS----VKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVL  224 (384)
Q Consensus       149 g~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~----~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~  224 (384)
                      +.+.+++.| ||++.|||-|.++.|.+.|+|.....+. .+..    ...+ +.|.|+|.+|+.+|+-  +|++ .||||
T Consensus        11 ~~~~v~~~l-PG~~kedi~v~~~~~~L~I~g~~~~~~~-~~~~~~~~e~~~-g~f~R~~~LP~~vd~~--~A~~-~~GvL   84 (90)
T cd06470          11 NNYRITLAV-AGFSEDDLEIEVENNQLTVTGKKADEEN-EEREYLHRGIAK-RAFERSFNLADHVKVK--GAEL-ENGLL   84 (90)
T ss_pred             CeEEEEEEC-CCCCHHHeEEEEECCEEEEEEEEccccc-CCCcEEEEEEec-eEEEEEEECCCCceEC--eeEE-eCCEE
Confidence            346666665 7999999999999999999998544322 1111    1112 6788999999999983  7765 67999


Q ss_pred             EEEehh
Q 016705          225 TLTFKR  230 (384)
Q Consensus       225 ~~~~~~  230 (384)
                      ++++.|
T Consensus        85 ~I~l~~   90 (90)
T cd06470          85 TIDLER   90 (90)
T ss_pred             EEEEEC
Confidence            999864

IbpA and IbpB are 16 kDa small heat shock proteins (sHsps). sHsps are molecular chaperones that suppress protein aggregation and protect against cell stress, and are generally active as large oligomers consisting of multiple subunits. IbpA and IbpB are produced during high-level production of various heterologous proteins, specifically human prorenin, renin and bovine insulin-like growth factor 2 (bIGF-2), and are strongly associated with inclusion bodies containing these heterologous proteins. IbpA and IbpB work as an integrated system to stabilize thermally aggregated proteins in a disaggregation competent state. The chaperone activity of IbpB is also significantly elevated as the temperature increases from normal to heat shock. The high temperature results in the disassociation of 2-3-MDa IbpB oligomers into smaller approximately 6

>PRK11597 heat shock chaperone IbpB; Provisional

Probab=98.15  E-value=4.9e-06  Score=73.96  Aligned_cols=77  Identities=17%  Similarity=0.182  Sum_probs=56.5

Q ss_pred             eEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCC---cceeeeccccceEeeCCCccCcceeeEEEecceeEEE
Q 016705          150 FVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGD---TSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTL  226 (384)
Q Consensus       150 ~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~---~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~  226 (384)
                      .+.|++.| ||++.|||.|.|+.|.+.|+|..+. +.++.   -+.+.| +.|.|+|.+|+.||+=  +|++ +||||++
T Consensus        44 ~y~v~adl-PGv~kedi~V~v~~~~LtI~ge~~~-~~~~~~~~~~Er~~-g~F~R~f~LP~~vd~~--~A~~-~nGVL~I  117 (142)
T PRK11597         44 HYRITLAL-AGFRQEDLDIQLEGTRLTVKGTPEQ-PEKEVKWLHQGLVN-QPFSLSFTLAENMEVS--GATF-VNGLLHI  117 (142)
T ss_pred             EEEEEEEe-CCCCHHHeEEEEECCEEEEEEEEcc-ccCCCcEEEEEEeC-cEEEEEEECCCCcccC--cCEE-cCCEEEE
Confidence            35666665 6999999999999999999997322 21111   112223 6788999999999996  6776 5799999


Q ss_pred             Eehhhc
Q 016705          227 TFKRLM  232 (384)
Q Consensus       227 ~~~~~~  232 (384)
                      ++.+..
T Consensus       118 ~lPK~~  123 (142)
T PRK11597        118 DLIRNE  123 (142)
T ss_pred             EEeccC
Confidence            987653

>PF04969 CS: CS domain; InterPro: IPR017447 The function of the CS domain is unknown

Probab=98.14  E-value=4.9e-05  Score=57.13  Aligned_cols=77  Identities=19%  Similarity=0.264  Sum_probs=64.0

Q ss_pred             CeeeEEEeCCeEEEEEeccCCCC--CCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEe
Q 016705           12 PVSAIWEEDERSVHFKVFLASGM--KQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLN   89 (384)
Q Consensus        12 P~VDV~ETDDeyII~A~FDLPGV--kKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~r   89 (384)
                      |+++++++++...|.+  .+++.  +++|++|+++++.|.|+......                                
T Consensus         1 ~~y~W~Qt~~~V~v~i--~~~~~~~~~~dv~v~~~~~~l~v~~~~~~~--------------------------------   46 (79)
T PF04969_consen    1 PRYDWYQTDDEVTVTI--PVKPVDISKEDVKVDFTDTSLSVSIKSGDG--------------------------------   46 (79)
T ss_dssp             SSEEEEEESSEEEEEE--E-TTTTSSGGGEEEEEETTEEEEEEEETTS--------------------------------
T ss_pred             CCeEEEECCCEEEEEE--EEcCCCCChHHeEEEEEeeEEEEEEEccCC--------------------------------
Confidence            7899999999999887  99654  59999999999999998643111                                


Q ss_pred             ecccceEEEEEECCCCcccCcceEEeecCcEEEEEEee
Q 016705           90 RPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKR  127 (384)
Q Consensus        90 ERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK  127 (384)
                          ..|...+.|...|++++.+..+.+ +.|.|+|.|
T Consensus        47 ----~~~~~~~~L~~~I~~~~s~~~~~~-~~i~i~L~K   79 (79)
T PF04969_consen   47 ----KEYLLEGELFGEIDPDESTWKVKD-NKIEITLKK   79 (79)
T ss_dssp             ----CEEEEEEEBSS-BECCCEEEEEET-TEEEEEEEB
T ss_pred             ----ceEEEEEEEeeeEcchhcEEEEEC-CEEEEEEEC
Confidence                157788889999999999999999 999999987

The CS domain is sometimes found C-terminal to the CHORD domain (IPR007051 from INTERPRO) in metazoan proteins, but occurs separately from the CHORD domain in plants. This association is thought to be indicative of an functional interaction between CS and CHORD domains [].; PDB: 1WGV_A 2KMW_A 2O30_B 1WH0_A 1EJF_A 2RH0_B 1RL1_A 2CR0_A 1WFI_A 2XCM_D ....

>COG0071 IbpA Molecular chaperone (small heat shock protein) [Posttranslational modification, protein turnover, chaperones]

Probab=97.98  E-value=2.2e-05  Score=68.50  Aligned_cols=82  Identities=28%  Similarity=0.402  Sum_probs=62.2

Q ss_pred             eEEEEEeecccCCccceEEEEeCCeEEEEeeeeee---eccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEE
Q 016705          150 FVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKK---EQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTL  226 (384)
Q Consensus       150 ~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~---~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~  226 (384)
                      .+.|.+.| ||++.|||-|.++.|.+.|+|.....   +.++--...-+.++|-|.|.+|+.|||=.+.|++ .||||++
T Consensus        51 ~~~I~~el-PG~~kedI~I~~~~~~l~I~g~~~~~~~~~~~~~~~~e~~~~~f~r~~~Lp~~v~~~~~~A~~-~nGvL~I  128 (146)
T COG0071          51 EYRITAEL-PGVDKEDIEITVEGNTLTIRGEREEEEEEEEEGYLRRERAYGEFERTFRLPEKVDPEVIKAKY-KNGLLTV  128 (146)
T ss_pred             EEEEEEEc-CCCChHHeEEEEECCEEEEEEEecccccccCCceEEEEEEeeeEEEEEECcccccccceeeEe-eCcEEEE
Confidence            46666665 89999999999999999999975431   1111111111237888999999999999888887 5899999


Q ss_pred             Eehhhcc
Q 016705          227 TFKRLMP  233 (384)
Q Consensus       227 ~~~~~~~  233 (384)
                      ++.|.-|
T Consensus       129 ~lpk~~~  135 (146)
T COG0071         129 TLPKAEP  135 (146)
T ss_pred             EEecccc
Confidence            9988765

>cd00298 ACD_sHsps_p23-like This domain family includes the alpha-crystallin domain (ACD) of alpha-crystallin-type small heat shock proteins (sHsps) and a similar domain found in p23-like proteins

Probab=97.97  E-value=5.4e-05  Score=55.10  Aligned_cols=74  Identities=32%  Similarity=0.460  Sum_probs=58.4

Q ss_pred             ceEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEe
Q 016705          149 GFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTF  228 (384)
Q Consensus       149 g~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~  228 (384)
                      +.+.+++++.. +.++|++|.++.+++.|+|.+...+.    .+..+ .++.+++.+|+.+||-..++.+.+ +.|++++
T Consensus         6 ~~v~i~i~~~~-~~~~~i~v~~~~~~l~v~~~~~~~~~----~~~~~-~~~~~~~~L~~~i~~~~~~~~~~~-~~l~i~l   78 (80)
T cd00298           6 DEVVVTVDLPG-VKKEDIKVEVEDNVLTISGKREEEEE----RERSY-GEFERSFELPEDVDPEKSKASLEN-GVLEITL   78 (80)
T ss_pred             CEEEEEEECCC-CCHHHeEEEEECCEEEEEEEEcCCCc----ceEee-eeEEEEEECCCCcCHHHCEEEEEC-CEEEEEE
Confidence            46788888755 67999999999999999997443222    22223 566789999999999999999998 8888876


Q ss_pred             h
Q 016705          229 K  229 (384)
Q Consensus       229 ~  229 (384)
                      .
T Consensus        79 ~   79 (80)
T cd00298          79 P   79 (80)
T ss_pred             c
Confidence            4

sHsps are small stress induced proteins with monomeric masses between 12 -43 kDa, whose common feature is this ACD. sHsps are generally active as large oligomers consisting of multiple subunits, and are believed to be ATP-independent chaperones that prevent aggregation and are important in refolding in combination with other Hsps. p23 is a cochaperone of the Hsp90 chaperoning pathway. It binds Hsp90 and participates in the folding of a number of Hsp90 clients including the progesterone receptor. p23 also has a passive chaperoning activity. p23 in addition may act as the cytosolic prostaglandin E2 synthase. Included in this family is the p23-like C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1) and the p23-like domains of human butyrate-induced transcript 1 (hB-ind

>PRK10743 heat shock protein IbpA; Provisional

Probab=97.94  E-value=2.1e-05  Score=69.36  Aligned_cols=77  Identities=17%  Similarity=0.230  Sum_probs=56.4

Q ss_pred             ceEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCc---ceeeeccccceEeeCCCccCcceeeEEEecceeEE
Q 016705          149 GFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDT---SVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLT  225 (384)
Q Consensus       149 g~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~---~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~  225 (384)
                      ..+.|++.| ||++.|||.|.|+.|.+.|+|..+. +.+...   ..+ +.+.|.|+|.+|+.||+=  +|++ .||||+
T Consensus        45 ~~~~v~ael-PGv~kedi~V~v~~~~LtI~ge~~~-~~~~~~~~~~Er-~~g~F~R~~~LP~~Vd~~--~A~~-~dGVL~  118 (137)
T PRK10743         45 NHYRIAIAV-AGFAESELEITAQDNLLVVKGAHAD-EQKERTYLYQGI-AERNFERKFQLAENIHVR--GANL-VNGLLY  118 (137)
T ss_pred             CEEEEEEEC-CCCCHHHeEEEEECCEEEEEEEECc-cccCCcEEEEEE-ECCEEEEEEECCCCcccC--cCEE-eCCEEE
Confidence            346666655 6999999999999999999997332 221110   111 226788999999999996  4776 579999


Q ss_pred             EEehhh
Q 016705          226 LTFKRL  231 (384)
Q Consensus       226 ~~~~~~  231 (384)
                      +++.+.
T Consensus       119 I~lPK~  124 (137)
T PRK10743        119 IDLERV  124 (137)
T ss_pred             EEEeCC
Confidence            998664

>cd06465 p23_hB-ind1_like p23_like domain found in human (h) butyrate-induced transcript 1 (B-ind1) and similar proteins

Probab=97.72  E-value=0.00042  Score=57.33  Aligned_cols=81  Identities=11%  Similarity=0.132  Sum_probs=68.5

Q ss_pred             CeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeec
Q 016705           12 PVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRP   91 (384)
Q Consensus        12 P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rER   91 (384)
                      |.++++++.+...|.+  .+|++  ++++|+++.+.|.|++.-..     ..                            
T Consensus         1 p~~~W~Qt~~~V~i~i--~~~~~--~~~~V~~~~~~l~v~~~~~~-----~~----------------------------   43 (108)
T cd06465           1 PPVLWAQRSDVVYLTI--ELPDA--KDPKIKLEPTSLSFKAKGGG-----GG----------------------------   43 (108)
T ss_pred             CceeeeECCCEEEEEE--EeCCC--CCcEEEEECCEEEEEEEcCC-----CC----------------------------
Confidence            6899999999999887  99998  88999999999999884210     10                            


Q ss_pred             ccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecC-CCC
Q 016705           92 NDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQR-AFD  132 (384)
Q Consensus        92 s~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~e-pe~  132 (384)
                        ..|...+.|...|+++..+.++.+ +.|.|+|.|.. +..
T Consensus        44 --~~y~~~~~L~~~I~pe~s~~~v~~-~kveI~L~K~~~~~~   82 (108)
T cd06465          44 --KKYEFDLEFYKEIDPEESKYKVTG-RQIEFVLRKKEAGEY   82 (108)
T ss_pred             --eeEEEEeEhhhhccccccEEEecC-CeEEEEEEECCCCCC
Confidence              047778899999999999999999 99999999987 443

hB-ind1 participates in signaling by the small GTPase Rac1. It binds to Rac1 and enhances different Rac1 effects including activation of nuclear factor (NF) kappaB and activation of c-Jun N-terminal kinase (JNK). hB-ind1 also plays a part in the RNA replication and particle production of Hepatitis C virus (HCV) through its interaction with heat shock protein Hsp90, HCV nonstructural protein 5A (NS5A), and the immunophilin FKBP8. hB-ind1 is upregulated in the outer layer of Chinese hamster V79 cells grown as multicell spheroids, versus in the same cells grown as monolayers. This group includes the Saccharomyces cerevisiae Sba1, a co-chaperone of the Hsp90. Sba1 has been shown to be is required for telomere length maintenance, and may modulate telomerase DNA-binding activity.

>cd06489 p23_CS_hSgt1_like p23_like domain similar to the C-terminal CS (CHORD-SGT1) domain of human (h) Sgt1 and related proteins

Probab=97.36  E-value=0.0013  Score=51.86  Aligned_cols=78  Identities=15%  Similarity=0.239  Sum_probs=65.6

Q ss_pred             eEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccc
Q 016705           15 AIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDG   94 (384)
Q Consensus        15 DV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~G   94 (384)
                      |++++++...|++  .++|+.+++++|+++++.|.+++...      .+                              .
T Consensus         1 dW~Q~~~~V~iti--~~k~~~~~~~~v~~~~~~l~~~~~~~------~~------------------------------~   42 (84)
T cd06489           1 DWYQTESQVVITI--LIKNVKPEDVSVEFEKRELSATVKLP------SG------------------------------N   42 (84)
T ss_pred             CccccCCEEEEEE--EECCCCHHHCEEEEeCCEEEEEEECC------CC------------------------------C
Confidence            6889999988877  89999999999999999999987531      11                              0


Q ss_pred             eEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCC
Q 016705           95 KIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAF  131 (384)
Q Consensus        95 sFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe  131 (384)
                      .|.-.+.|...|++++.+.+... +-+.|+|.|..+.
T Consensus        43 ~y~~~~~L~~~I~p~~s~~~v~~-~kiei~L~K~~~~   78 (84)
T cd06489          43 DYSLKLHLLHPIVPEQSSYKILS-TKIEIKLKKTEAI   78 (84)
T ss_pred             cEEEeeecCceecchhcEEEEeC-cEEEEEEEcCCCC
Confidence            36677899999999999999998 8999999998654

hSgt1 is a co-chaperone which has been shown to be elevated in HEp-2 cells as a result of stress conditions such as heat shock. It interacts with the heat shock proteins (HSPs) Hsp70 and Hsp90, and it expression pattern is synchronized with these two Hsps. The interaction with HSP90 has been shown to involve the hSgt1_CS domain, and appears to be required for correct kinetochore assembly and efficient cell division. Some proteins in this subgroup contain a tetratricopeptide repeat (TPR) HSP-binding domain N-terminal to this CS domain, and most proteins in this subgroup contain a Sgt1-specific (SGS) domain C-terminal to the CS domain. The SGS domain interacts with some S100 family proteins. Studies suggest that S100A6 modulates in a Ca2+ dependent manner the interactions of hSgt1 with Hsp90 and Hsp70. The yeast Sgt1 CS domain is not found in this subgroup.

>PF08190 PIH1: pre-RNA processing PIH1/Nop17

Probab=97.26  E-value=0.0019  Score=61.66  Aligned_cols=66  Identities=23%  Similarity=0.347  Sum_probs=56.0

Q ss_pred             CCeEEEEEeccCCCC-CCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccceEEE
Q 016705           20 DERSVHFKVFLASGM-KQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGKIEM   98 (384)
Q Consensus        20 DDeyII~A~FDLPGV-kKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~GsFsR   98 (384)
                      .+.++|++  +|||+ +-.+|.|+|.++.|.|.....                                       .|.-
T Consensus       260 p~~lvv~i--~LP~~~s~~~i~LdV~~~~l~l~~~~~---------------------------------------~y~L  298 (328)
T PF08190_consen  260 PEELVVEI--ELPGVESASDIDLDVSEDRLSLSSPKP---------------------------------------KYRL  298 (328)
T ss_pred             CceEEEEE--ECCCcCccceeEEEEeCCEEEEEeCCC---------------------------------------ceEE
Confidence            45677766  99999 789999999999999975320                                       3677


Q ss_pred             EEECCCCcccCcceEEeecC-cEEEEEEe
Q 016705           99 NFSLPVGVDPDGFSTSMDDA-GVLTLTFK  126 (384)
Q Consensus        99 sI~LPe~VD~dkIkAsLeNd-GVLTITLP  126 (384)
                      .+.||..||.+..+|.|... ++|+||||
T Consensus       299 ~l~LP~~V~~~~~~Akf~~~~~~L~vtlp  327 (328)
T PF08190_consen  299 DLPLPYPVDEDNGKAKFDKKTKTLTVTLP  327 (328)
T ss_pred             EccCCCcccCCCceEEEccCCCEEEEEEE
Confidence            89999999999999999765 99999998

>cd06488 p23_melusin_like p23_like domain similar to the C-terminal (tail) domain of vertebrate Melusin and related proteins

Probab=97.00  E-value=0.0087  Score=48.18  Aligned_cols=80  Identities=11%  Similarity=0.039  Sum_probs=67.8

Q ss_pred             eeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecc
Q 016705           13 VSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPN   92 (384)
Q Consensus        13 ~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs   92 (384)
                      ++|++++++...|.+  -+.|+.++++++.++++.|+|+..-..      +.                            
T Consensus         2 R~dW~Qs~~~V~ItI--~~k~~~~~~~~v~~~~~~l~v~~~~~~------~~----------------------------   45 (87)
T cd06488           2 RHDWHQTGSHVVVSV--YAKNSNPELSVVEANSTVLTIHIVFEG------NK----------------------------   45 (87)
T ss_pred             CccEeeCCCEEEEEE--EECcCCccceEEEecCCEEEEEEECCC------Cc----------------------------
Confidence            589999999999988  889999999999999999988753210      10                            


Q ss_pred             cceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCC
Q 016705           93 DGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAF  131 (384)
Q Consensus        93 ~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe  131 (384)
                        .|...+.|-..|++++.+-.... .-+.|++.|..+.
T Consensus        46 --~y~~~l~L~~~I~~~~s~~~v~~-~kvei~L~K~~~~   81 (87)
T cd06488          46 --EFQLDIELWGVIDVEKSSVNMLP-TKVEIKLRKAEPG   81 (87)
T ss_pred             --eEEEEeeccceEChhHcEEEecC-cEEEEEEEeCCCC
Confidence              47888899999999999999998 9999999998764

Melusin's tail domain interacts with the cytoplasmic domain of beta1-A and beta1-D isoforms of beta1 integrin, it does not bind other integrin beta subunits. Melusin is a muscle-specific protein expressed in skeletal and cardiac muscles but not in smooth muscle or other tissues. It is needed for heart hypertrophy following mechanical overload. The integrin-binding portion of this domain appears to be sequestered in the full length melusin protein, Ca2+ may modulate the protein's conformation exposing this binding site. This group includes Chordc1, also known as Chp-1, which is conserved from vertebrates to humans. Mammalian Chordc1 interacts with the heat shock protein (HSP) Hsp90 and is implicated in circadian and/or homeostatic mechanisms in the brain. The N-terminal portions of proteins belonging to this group contain two cysteine and histidine rich domain (C

>cd06468 p23_CacyBP p23_like domain found in proteins similar to Calcyclin-Binding Protein(CacyBP)/Siah-1-interacting protein (SIP)

Probab=96.87  E-value=0.013  Score=46.77  Aligned_cols=80  Identities=13%  Similarity=0.203  Sum_probs=65.5

Q ss_pred             eeeEEEeCCeEEEEEeccCCCCCC---CCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEe
Q 016705           13 VSAIWEEDERSVHFKVFLASGMKQ---EDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLN   89 (384)
Q Consensus        13 ~VDV~ETDDeyII~A~FDLPGVkK---EDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~r   89 (384)
                      .++++++++...|.+  .+|+..+   ++++|+++.+.|.|++.-    .  ++.                         
T Consensus         3 ~y~W~Qt~~~V~i~i--~~~~~~~~~~~~v~v~~~~~~l~v~~~~----~--~~~-------------------------   49 (92)
T cd06468           3 KYAWDQSDKFVKIYI--TLKGVHQLPKENIQVEFTERSFELKVHD----L--NGK-------------------------   49 (92)
T ss_pred             eeeeecCCCEEEEEE--EccCCCcCCcccEEEEecCCEEEEEEEC----C--CCc-------------------------
Confidence            478999999999888  9999876   999999999999998731    0  110                         


Q ss_pred             ecccceEEEEEE-CCCCcccCcceEEeecCcEEEEEEeecCCC
Q 016705           90 RPNDGKIEMNFS-LPVGVDPDGFSTSMDDAGVLTLTFKRQRAF  131 (384)
Q Consensus        90 ERs~GsFsRsI~-LPe~VD~dkIkAsLeNdGVLTITLPK~epe  131 (384)
                           .|.-.+. |-..|++++.+..+.. +-+.|+|.|..+.
T Consensus        50 -----~~~~~~~~L~~~I~~e~s~~~~~~-~ki~i~L~K~~~~   86 (92)
T cd06468          50 -----NYRFTINRLLKKIDPEKSSFKVKT-DRIVITLAKKKEK   86 (92)
T ss_pred             -----EEEEEehHhhCccCccccEEEEeC-CEEEEEEEeCCCC
Confidence                 3445554 8899999999999999 9999999999864

CacyBP/SIP interacts with S100A6 (calcyclin), with some other members of the S100 family, with tubulin, and with Siah-1 and Skp-1. The latter two are components of the ubiquitin ligase that regulates beta-catenin degradation. The beta-catenin gene is an oncogene participating in tumorigenesis in many different cancers. Overexpression of CacyBP/SIP, in part through its effect on the expression of beta-catenin, inhibits the proliferation, tumorigenicity, and invasion of gastric cancer cells. CacyBP/SIP is abundant in neurons and neuroblastoma NB2a cells. An extensive re-organization of microtubules accompanies the differentiation of NB2a cells. CacyBP/SIP may contribute to NB2a cell differentiation through binding to and increasing the oligomerization of tubulin. CacyBP/SIP is also implicated in differentiation of erythroid cells, rat neonatal cardiomyocytes

>cd06467 p23_NUDC_like p23_like domain of NUD (nuclear distribution) C and similar proteins

Probab=96.40  E-value=0.037  Score=43.16  Aligned_cols=76  Identities=17%  Similarity=0.181  Sum_probs=58.3

Q ss_pred             eeEEEeCCeEEEEEeccCC-CCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecc
Q 016705           14 SAIWEEDERSVHFKVFLAS-GMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPN   92 (384)
Q Consensus        14 VDV~ETDDeyII~A~FDLP-GVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs   92 (384)
                      +++++++++..|++  .+| ++.++|+++++.++.|.|+...        .                             
T Consensus         1 y~W~Qt~~~V~i~i--~~~~~~~~~dv~v~~~~~~l~v~~~~--------~-----------------------------   41 (85)
T cd06467           1 YSWTQTLDEVTVTI--PLPEGTKSKDVKVEITPKHLKVGVKG--------G-----------------------------   41 (85)
T ss_pred             CEEEeeCCEEEEEE--ECCCCCcceeEEEEEEcCEEEEEECC--------C-----------------------------
Confidence            46789999988876  997 7999999999999999998631        0                             


Q ss_pred             cceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCC
Q 016705           93 DGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRA  130 (384)
Q Consensus        93 ~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~ep  130 (384)
                        .+.-.-.|...|+++...-++.+...|.|+|+|..+
T Consensus        42 --~~~l~~~L~~~I~~~~s~w~~~~~~~v~i~L~K~~~   77 (85)
T cd06467          42 --EPLLDGELYAKVKVDESTWTLEDGKLLEITLEKRNE   77 (85)
T ss_pred             --CceEcCcccCceeEcCCEEEEeCCCEEEEEEEECCC
Confidence              011123578889999877777653679999999876

Aspergillus nidulas (An) NUDC is needed for nuclear movement. AnNUDC is localized at the hyphal cortex, and binds NUDF at spindle pole bodies (SPBs) and in the cytoplasm at different stages in the cell cycle. At the SPBs it is part of the dynein molecular motor/NUDF complex that regulates microtubule dynamics. Mammalian(m) NUDC associates both with the dynein complex and also with an anti-inflammatory enzyme, platelet activating factor acetylhydrolase I, PAF-AH(I) complex, through binding mNUDF, the regulatory beta subunit of PAF-AH(I). mNUDC is important for cell proliferation both in normal and tumor tissues. Its expression is elevated in various cell types undergoing mitosis or stimulated to proliferate, with high expression levels observed in leukemic cells and tumors. For a leukemic cell line, human NUDC was shown to activate the thrombopoietin (TPO) receptor (Mpl) by binding to its ext

>cd06493 p23_NUDCD1_like p23_NUDCD1: p23-like NUD (nuclear distribution) C-like domain found in human NUD (nuclear distribution) C domain-containing protein 1, NUDCD1 (also known as CML66), and similar proteins

Probab=96.29  E-value=0.069  Score=42.62  Aligned_cols=76  Identities=11%  Similarity=0.117  Sum_probs=59.6

Q ss_pred             eeEEEeCCeEEEEEeccCC-CCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecc
Q 016705           14 SAIWEEDERSVHFKVFLAS-GMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPN   92 (384)
Q Consensus        14 VDV~ETDDeyII~A~FDLP-GVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs   92 (384)
                      ++++++.+...|.+  .+| |+.++|++|+++.+.|.|...     .  ..                             
T Consensus         1 Y~W~Qt~~~V~v~i--~~p~~~~~~dv~v~~~~~~l~v~~~-----~--~~-----------------------------   42 (85)
T cd06493           1 YYWQQTEEDLTLTI--RLPEDTTKEDIRIKFLPDHISIALK-----D--QA-----------------------------   42 (85)
T ss_pred             CccEEeCCEEEEEE--ECCCCCChhhEEEEEecCEEEEEeC-----C--CC-----------------------------
Confidence            47889999999877  996 999999999999999998641     0  00                             


Q ss_pred             cceEEEEEECCCCcccCcceEEeecCc-EEEEEEeecCCC
Q 016705           93 DGKIEMNFSLPVGVDPDGFSTSMDDAG-VLTLTFKRQRAF  131 (384)
Q Consensus        93 ~GsFsRsI~LPe~VD~dkIkAsLeNdG-VLTITLPK~epe  131 (384)
                        .+ ..-.|...|+++..+=++++ | .|.|+|.|..+.
T Consensus        43 --~~-~~g~L~~~I~~d~Stw~i~~-~~~l~i~L~K~~~~   78 (85)
T cd06493          43 --PL-LEGKLYSSIDHESSTWIIKE-NKSLEVSLIKKDEG   78 (85)
T ss_pred             --eE-EeCcccCcccccCcEEEEeC-CCEEEEEEEECCCC
Confidence              11 23378889999997777777 6 799999998754

NUDCD1/CML66 is a broadly immunogenic tumor associated antigen, which is highly expressed in a variety of solid tumors and in leukemias. In normal tissues high expression of NUDCD1/CML66 is limited to testis and heart.

>cd06494 p23_NUDCD2_like p23-like NUD (nuclear distribution) C-like found in human NUDC domain-containing protein 2 (NUDCD2) and similar proteins

Probab=95.88  E-value=0.097  Score=43.58  Aligned_cols=82  Identities=12%  Similarity=0.167  Sum_probs=64.3

Q ss_pred             CCCCCeeeEEEeCCeEEEEEeccCC-CCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCce
Q 016705            8 KKPDPVSAIWEEDERSVHFKVFLAS-GMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTS   86 (384)
Q Consensus         8 ~~~~P~VDV~ETDDeyII~A~FDLP-GVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~   86 (384)
                      ++..+.++++++.++..|++  .+| |+++.|++|.+..+.|.|.-.         +                       
T Consensus         2 ~~~~~~y~W~QT~~eV~v~i--~lp~~~~~kdv~V~i~~~~l~V~~~---------g-----------------------   47 (93)
T cd06494           2 PCKTPWGCWYQTMDEVFIEV--NVPPGTRAKDVKCKLGSRDISLAVK---------G-----------------------   47 (93)
T ss_pred             CccCCCcEEEeEcCEEEEEE--ECCCCCceeeEEEEEEcCEEEEEEC---------C-----------------------
Confidence            35577899999999999877  888 999999999999999998741         0                       


Q ss_pred             EEeecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCC
Q 016705           87 SLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAF  131 (384)
Q Consensus        87 ~~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe  131 (384)
                        ++.-.|      .|+..|+++...=+++++.+|.|+|.|....
T Consensus        48 --~~~l~G------~L~~~I~~destWtled~k~l~I~L~K~~~~   84 (93)
T cd06494          48 --QEVLKG------KLFDSVVADECTWTLEDRKLIRIVLTKSNRD   84 (93)
T ss_pred             --EEEEcC------cccCccCcccCEEEEECCcEEEEEEEeCCCC
Confidence              011112      5778899999888999834589999998644

Little is known about the function of the proteins in this subgroup.

>cd00237 p23 p23 binds heat shock protein (Hsp)90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor

Probab=95.76  E-value=0.16  Score=43.14  Aligned_cols=79  Identities=15%  Similarity=0.137  Sum_probs=62.8

Q ss_pred             CeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeec
Q 016705           12 PVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRP   91 (384)
Q Consensus        12 P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rER   91 (384)
                      |.++++++.+...|++  ++|+  .+|++|+++++.|+++|..   .   ++.                           
T Consensus         2 p~v~WaQr~~~V~ltI--~v~d--~~d~~v~l~~~~l~f~~~~---~---~g~---------------------------   44 (106)
T cd00237           2 AKTLWYDRRDYVFIEF--CVED--SKDVKVDFEKSKLTFSCLN---G---DNV---------------------------   44 (106)
T ss_pred             CcceeeECCCEEEEEE--EeCC--CCCcEEEEecCEEEEEEEC---C---CCc---------------------------
Confidence            7899999999888877  9999  5899999999999998832   1   110                           


Q ss_pred             ccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCC
Q 016705           92 NDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAF  131 (384)
Q Consensus        92 s~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe  131 (384)
                         .|.-.+.|-..|++++.+-+... --+.|.|.|....
T Consensus        45 ---~y~~~l~l~~~I~pe~Sk~~v~~-r~ve~~L~K~~~~   80 (106)
T cd00237          45 ---KIYNEIELYDRVDPNDSKHKRTD-RSILCCLRKGKEG   80 (106)
T ss_pred             ---EEEEEEEeecccCcccCeEEeCC-ceEEEEEEeCCCC
Confidence               35567788889999988888777 7788889998643

p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis.

>PLN03088 SGT1, suppressor of G2 allele of SKP1; Provisional

Probab=95.61  E-value=0.078  Score=52.54  Aligned_cols=83  Identities=14%  Similarity=0.213  Sum_probs=68.5

Q ss_pred             CCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEe
Q 016705           10 PDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLN   89 (384)
Q Consensus        10 ~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~r   89 (384)
                      ..++.|+|++++.+.|.+  -+.|+.+++++|++.++.|.|+-...     ...                          
T Consensus       155 ~~~r~dWyQs~~~V~i~i--~~k~~~~~~~~v~~~~~~l~v~~~~~-----~~~--------------------------  201 (356)
T PLN03088        155 PKYRHEFYQKPEEVVVTV--FAKGVPAENVNVDFGEQILSVVIEVP-----GED--------------------------  201 (356)
T ss_pred             CccccceeecCCEEEEEE--EecCCChHHcEEEeecCEEEEEEecC-----CCc--------------------------
Confidence            347899999999999887  99999999999999999999886321     000                          


Q ss_pred             ecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCC
Q 016705           90 RPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAF  131 (384)
Q Consensus        90 ERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe  131 (384)
                           .|...+.|-..|++++.+-+... --+.|+|.|..+.
T Consensus       202 -----~y~~~~~L~~~I~p~~s~~~v~~-~Kiei~l~K~~~~  237 (356)
T PLN03088        202 -----AYHLQPRLFGKIIPDKCKYEVLS-TKIEIRLAKAEPI  237 (356)
T ss_pred             -----ceeecccccccccccccEEEEec-ceEEEEEecCCCC
Confidence                 36666899999999999999998 7899999887654

>cd06469 p23_DYX1C1_like p23_like domain found in proteins similar to dyslexia susceptibility 1 (DYX1) candidate 1 (C1) protein, DYX1C1

Probab=95.52  E-value=0.095  Score=40.19  Aligned_cols=64  Identities=16%  Similarity=0.102  Sum_probs=51.1

Q ss_pred             ceEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEe
Q 016705          149 GFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTF  228 (384)
Q Consensus       149 g~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~  228 (384)
                      ..+.+.+.+. +.+.+|+.|.++++.+.|+|             +    ++.+++.+|+.|||=..++++.+ +.|.+++
T Consensus         6 ~~v~i~i~~p-~v~~~~v~v~~~~~~l~i~~-------------~----~~~~~~~l~~~I~~e~~~~~~~~-~~l~i~L   66 (78)
T cd06469           6 EDVKISVPLK-GVKTSKVDIFCSDLYLKVNF-------------P----PYLFELDLAAPIDDEKSSAKIGN-GVLVFTL   66 (78)
T ss_pred             CEEEEEEEeC-CCccccceEEEecCEEEEcC-------------C----CEEEEEeCcccccccccEEEEeC-CEEEEEE
Confidence            3467777765 68999999999999988877             1    23578899999999999999755 7788887


Q ss_pred             hhh
Q 016705          229 KRL  231 (384)
Q Consensus       229 ~~~  231 (384)
                      ...
T Consensus        67 ~K~   69 (78)
T cd06469          67 VKK   69 (78)
T ss_pred             EeC
Confidence            653

The human gene encoding this protein is a positional candidate gene for developmental dyslexia (DD), it is located on 15q21.3 by the DYX1 DD susceptibility locus (15q15-21). Independent association studies have reported conflicting results. However, association of short-term memory, which plays a role in DD, with a variant within the DYX1C1 gene has been reported. Most proteins belonging to this group contain a C-terminal tetratricopeptide repeat (TPR) protein binding region.

>KOG1309 consensus Suppressor of G2 allele of skp1 [Signal transduction mechanisms]

Probab=94.92  E-value=0.076  Score=50.28  Aligned_cols=85  Identities=16%  Similarity=0.212  Sum_probs=64.6

Q ss_pred             CCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEe
Q 016705           10 PDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLN   89 (384)
Q Consensus        10 ~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~r   89 (384)
                      ..++.|+|++....+|++  -.+++.++|+.|++.++.|.|.-+-.   .   ++                         
T Consensus         2 ~k~r~DwyQt~~~vvIti--~~k~v~~~~v~v~~s~~~l~~~~~~~---~---g~-------------------------   48 (196)
T KOG1309|consen    2 MKIRHDWYQTETSVVITI--FAKNVPKEDVNVEISENTLSIVIQLP---S---GS-------------------------   48 (196)
T ss_pred             CcccceeecCCceEEEEE--EecCCCccceeEEeecceEEEEEecC---C---ch-------------------------
Confidence            468899999999999988  99999999999999999998875432   1   00                         


Q ss_pred             ecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCCCc
Q 016705           90 RPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDL  133 (384)
Q Consensus        90 ERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe~~  133 (384)
                           .|.-...|-..|.+++.+-..-. --+.|+|+|....+.
T Consensus        49 -----~~~l~~~L~~~I~pe~~s~k~~s-tKVEI~L~K~~~irW   86 (196)
T KOG1309|consen   49 -----EYNLQLKLYHEIIPEKSSFKVFS-TKVEITLAKAEIIRW   86 (196)
T ss_pred             -----hhhhhHHhcccccccceeeEeee-eeEEEEeccccchhh
Confidence                 24444556678888887666665 668899999654443

>KOG0710 consensus Molecular chaperone (small heat-shock protein Hsp26/Hsp42) [Posttranslational modification, protein turnover, chaperones]

Probab=94.38  E-value=0.036  Score=51.46  Aligned_cols=76  Identities=37%  Similarity=0.526  Sum_probs=58.8

Q ss_pred             cccCCccceEEEEeCCe-EEEEeeeeeeeccCCcceeeec------cccceEeeCCCccCcceeeEEEecceeEEEEehh
Q 016705          158 AAGTKIEDLVVVIERGK-YLIVGMLQKKEQEGDTSVKQYH------GNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFKR  230 (384)
Q Consensus       158 ~~~~k~edl~v~v~~~~-~~v~g~~~k~~~~~~~~~k~~h------~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~~~  230 (384)
                      =|+.+.||+.|-++.++ ++|+|..++.+.+. .+-+.||      +.|.|.+.+|+-+|-=.+.|.| .||||+++...
T Consensus       102 ~Pgl~ke~iKv~~~~~~~l~isGe~~~e~e~~-~~~~~~~~~E~~~g~F~r~~~lPenv~~d~ikA~~-~nGVL~VvvpK  179 (196)
T KOG0710|consen  102 LPGLKKEDIKVEVEDEKVLTISGERKKEEEES-GSGKKWKRVERKLGKFKRRFELPENVDVDEIKAEM-ENGVLTVVVPK  179 (196)
T ss_pred             CCCCCchhceEEeccCcEEEEecccccccccc-cCCccceeehhcccceEeeecCCccccHHHHHHHh-hCCeEEEEEec
Confidence            37889999999999997 99999876654432 1222233      6788999999999887787776 47999999988


Q ss_pred             hcccc
Q 016705          231 LMPFL  235 (384)
Q Consensus       231 ~~~~~  235 (384)
                      +-|.+
T Consensus       180 ~~~~~  184 (196)
T KOG0710|consen  180 LEPLL  184 (196)
T ss_pred             ccccc
Confidence            87754

>cd06490 p23_NCB5OR p23_like domain found in NAD(P)H cytochrome b5 (NCB5) oxidoreductase (OR) and similar proteins

Probab=93.39  E-value=1.1  Score=36.43  Aligned_cols=78  Identities=13%  Similarity=0.112  Sum_probs=57.1

Q ss_pred             eeEEEeCCeEEEEEeccCC--CCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeec
Q 016705           14 SAIWEEDERSVHFKVFLAS--GMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRP   91 (384)
Q Consensus        14 VDV~ETDDeyII~A~FDLP--GVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rER   91 (384)
                      .|+|++++...|.+  -..  +..++++.+..+.+.|.|+-.-.      ..                            
T Consensus         1 ~DWyQt~~~Vtiti--y~K~~~~~~~~v~v~~~~~~l~v~~~~~------~~----------------------------   44 (87)
T cd06490           1 YDWFQTDSEVTIVV--YTKSKGNPADIVIVDDQQRELRVEIILG------DK----------------------------   44 (87)
T ss_pred             CCceECCCEEEEEE--EEcccCCCCccEEEECCCCEEEEEEECC------Cc----------------------------
Confidence            48999999999987  666  45566666776777888865321      10                            


Q ss_pred             ccceEEEEEECCCCcccCcceEEee--cCcEEEEEEeecCCCC
Q 016705           92 NDGKIEMNFSLPVGVDPDGFSTSMD--DAGVLTLTFKRQRAFD  132 (384)
Q Consensus        92 s~GsFsRsI~LPe~VD~dkIkAsLe--NdGVLTITLPK~epe~  132 (384)
                         .|...+.|=..|+++. +.++.  - |-+.|++.|.++.+
T Consensus        45 ---~~~~~~~L~~~I~~~~-~~~~~~~~-~KVEI~L~K~e~~~   82 (87)
T cd06490          45 ---SYLLHLDLSNEVQWPC-EVRISTET-GKIELVLKKKEPEK   82 (87)
T ss_pred             ---eEEEeeeccccCCCCc-EEEEcccC-ceEEEEEEcCCCCc
Confidence               4777788888888774 55555  6 78999999987653

NCB5OR is widely expressed in human organs and tissues and is localized in the ER (endoplasmic reticulum). It appears to play a critical role in maintaining viable pancreatic beta cells. Mice homozygous for a targeted knockout (KO) of the gene encoding NCB5OR develop an early-onset nonautoimmune diabetes phenotype with a non-inflammatory beta-cell deficiency. The role of NCB5OR in beta cells may be in maintaining or regulating their redox status. Proteins in this group in addition contain an N-terminal cytochrome b5 domain and a C-terminal cytochrome b5 oxidoreductase domain. The gene encoding NCB5OR has been considered as a positional candidate for type II diabetes and other diabetes subtypes related to B-cell dysfunction, however variation in its coding region does not appear not to be a major contributor to the pathogenesis of these diseases.

>cd06463 p23_like Proteins containing this p23_like domain include p23 and its Saccharomyces cerevisiae (Sc) homolog Sba1

Probab=92.00  E-value=1.1  Score=33.58  Aligned_cols=69  Identities=14%  Similarity=0.015  Sum_probs=52.8

Q ss_pred             eEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEeh
Q 016705          150 FVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFK  229 (384)
Q Consensus       150 ~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~~  229 (384)
                      .+.+.+++.... .+|+.|.++.+.+.|+....        ..    .++..++.+++.|||=..++++.+ +.|.+++.
T Consensus         7 ~v~i~v~~~~~~-~~~~~v~~~~~~l~i~~~~~--------~~----~~~~~~~~L~~~I~~~~s~~~~~~-~~l~i~L~   72 (84)
T cd06463           7 EVTITIPLKDVT-KKDVKVEFTPKSLTVSVKGG--------GG----KEYLLEGELFGPIDPEESKWTVED-RKIEITLK   72 (84)
T ss_pred             EEEEEEEcCCCC-ccceEEEEecCEEEEEeeCC--------CC----CceEEeeEccCccchhhcEEEEeC-CEEEEEEE
Confidence            377778877655 99999999999999988521        11    234567889999999989999865 78888876


Q ss_pred             hhc
Q 016705          230 RLM  232 (384)
Q Consensus       230 ~~~  232 (384)
                      +.-
T Consensus        73 K~~   75 (84)
T cd06463          73 KKE   75 (84)
T ss_pred             ECC
Confidence            643

Both are co-chaperones for the heat shock protein (Hsp) 90. p23 binds Hsp90 and participates in the folding of a number of Hsp90 clients, including the progesterone receptor. p23 also has a passive chaperoning activity and in addition may participate in prostaglandin synthesis. Both p23 and Sba1p can regulate telomerase activity. This group includes domains similar to the C-terminal CHORD-SGT1 (CS) domain of suppressor of G2 allele of Skp1 (Sgt1). Sgt1 interacts with multiple protein complexes and has the features of a co-chaperone. Human (h) Sgt1 interacts with both Hsp70 and Hsp90, and has been shown to bind Hsp90 through its CS domain. Saccharomyces cerevisiae (Sc) Sgt1 is a subunit of both core kinetochore and SCF (Skp1-Cul1-F-box) ubiquitin ligase complexes. Sgt1 is required for pathogen resistance in plants. This group also includes the p23_like domains of

>cd06492 p23_mNUDC_like p23-like NUD (nuclear distribution) C-like domain of mammalian(m) NUDC and similar proteins

Probab=81.36  E-value=11  Score=30.78  Aligned_cols=74  Identities=20%  Similarity=0.161  Sum_probs=53.8

Q ss_pred             EEEeCCeEEEEEeccCC-C--CCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecc
Q 016705           16 IWEEDERSVHFKVFLAS-G--MKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPN   92 (384)
Q Consensus        16 V~ETDDeyII~A~FDLP-G--VkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs   92 (384)
                      +.++.++..+++  .+| +  +++.|++|.+..+.|.|.-+-      .+                       ..     
T Consensus         3 W~QT~~ev~v~v--~l~~~~~~~~kdv~v~i~~~~l~v~~~g------~~-----------------------~~-----   46 (87)
T cd06492           3 WTQTLSEVELKV--PFKVSFRLKGKDVVVDIQRKHLKVGLKG------QP-----------------------PI-----   46 (87)
T ss_pred             cEeecCEEEEEE--ECCCCCCccceEEEEEEecCEEEEEECC------Cc-----------------------eE-----
Confidence            456777877776  775 3  889999999999999985411      00                       00     


Q ss_pred             cceEEEEEECCCCcccCcceEEeecCc-EEEEEEeecCCC
Q 016705           93 DGKIEMNFSLPVGVDPDGFSTSMDDAG-VLTLTFKRQRAF  131 (384)
Q Consensus        93 ~GsFsRsI~LPe~VD~dkIkAsLeNdG-VLTITLPK~epe  131 (384)
                         +  .=.|...|+++...=++++ | .|.|+|-|..+.
T Consensus        47 ---i--~G~L~~~V~~des~Wtled-~~~l~i~L~K~~~~   80 (87)
T cd06492          47 ---I--DGELYNEVKVEESSWLIED-GKVVTVNLEKINKM   80 (87)
T ss_pred             ---E--eCcccCcccccccEEEEeC-CCEEEEEEEECCCC
Confidence               1  1156778898888888888 6 899999998653

Mammalian(m) NUDC associates both with the dynein complex and also with an anti-inflammatory enzyme, platelet activating factor acetylhydrolase I, PAF-AH(I) complex, through binding mNUDF, the regulatory beta subunit of PAF-AH(I). mNUDC is important for cell proliferation both in normal and tumor tissues. Its expression is elevated in various cell types undergoing mitosis or stimulated to proliferate, with high expression levels observed in leukemic cells and tumors. For a leukemic cell line, human NUDC was shown to activate the thrombopoietin (TPO) receptor (Mpl) by binding to its extracellular domain, and promoting cell proliferation and differentiation.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	384
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	4e-12
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	5e-11
4eld_A	161	MJ16.5-P1, small heat shock protein HSP16.5; chape	2e-06
3gla_A	100	Low molecular weight heat shock protein; HSPA, SHP	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-05
3l1e_A	106	Alpha-crystallin A chain; lens transparency, polyd	2e-04
1gme_A	151	Heat shock protein 16.9B; small heat shock protein	3e-04
2wj5_A	101	Heat shock protein beta-6; chaperone, disulfide bo	7e-04
3aab_A	123	Putative uncharacterized protein ST1653; alpha-cry	9e-04

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata} Length = 314

 Score = 65.6 bits (159), Expect = 4e-12
 Identities = 35/265 (13%), Positives = 77/265 (29%), Gaps = 32/265 (12%)

Query: 97  EMNFSLPVGVDPDGFSTSMDDAGVLTL-----TFKRQRAFDLRNVAMGWEHAKDSKKGF- 150
            +    P     + F + M +   +         +  +  +L  +   +E  KD +  F 
Sbjct: 56  NLFSLEPFTAMDNAFESVMKEMSAIQPREFHPELEYTQPGELDFLKDAYEVGKDGRLHFK 115

Query: 151 VDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVD 210
           V F        K E++ +  +    L+V   +          +       RS   P  VD
Sbjct: 116 VYFNV---KNFKAEEITIKAD-KNKLVVRAQKSVACGDAAMSESVG----RSIPLPPSVD 167

Query: 211 PFGFSTSMDDAGVLTLTFKRLMPFLSSTVPEGAFENVIMGWDWEHAKDSRKGFVDFKAY- 269
                 ++    VL +      P   +          I   + +  + + K     +   
Sbjct: 168 RNHIQATITTDDVLVIEAPVNEPNYKAIKLSPEKGLAIQPSEVQERQLAVKNKEGLEIVT 227

Query: 270 -------------LAAGTKIEDLMIGIDGGKYLTIGMLEKKEHEGDTSLKQYEGNNF-RS 315
                        +      +D+ +   G K    G     + E   +    E   F ++
Sbjct: 228 AEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHG--VTGKEEKTENASHSEHREFYKA 285

Query: 316 FLLPDGLGPFGYSTSMDDAGILTLT 340
           F+ P+ +        + D G++ + 
Sbjct: 286 FVTPEVVDASKTQAEIVD-GLMVVE 309

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata} Length = 314

 Score = 62.2 bits (150), Expect = 5e-11
 Identities = 33/239 (13%), Positives = 70/239 (29%), Gaps = 56/239 (23%)

Query: 14  SAIWEEDERSVHFKVFL-ASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSF 72
            A     +  +HFKV+      K E++ I     KLV+  +                   
Sbjct: 102 DAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQ------------------- 142

Query: 73  FSFLKKNEEARDTSSLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFD 132
                   +A  + S+ R        +  LP  VD +    ++    VL +         
Sbjct: 143 --KSVACGDAAMSESVGR--------SIPLPPSVDRNHIQATITTDDVLVIEAPVNEPNY 192

Query: 133 LRNVAMGWEHAKDSKKGFVDFKAY------------------------LAAGTKIEDLVV 168
                   +          + +                          +      +D+ V
Sbjct: 193 KAIKLSPEKGLAIQPSEVQERQLAVKNKEGLEIVTAEDGSKKIHLELKVDPHFAPKDVKV 252

Query: 169 VIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLT 227
             +  K  + G+   KE++ + +    H   +++F+ P+ VD       + D G++ + 
Sbjct: 253 WAKGNKVYVHGV-TGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEIVD-GLMVVE 309

>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A Length = 161

 Score = 46.7 bits (111), Expect = 2e-06
 Identities = 18/111 (16%), Positives = 36/111 (32%), Gaps = 22/111 (19%)

Query: 17  WEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFL 76
             E ++ +    +L  G+ +ED+ +      L I  + +                     
Sbjct: 61  IIEGDQHIKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSPL------------------- 100

Query: 77  KKNEEARDTSSLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKR 127
              E  R   S     + +I     LP  V  +  S   ++ GVL++   +
Sbjct: 101 MITESERIIYSEIP-EEEEIYRTIKLPATVKEENASAKFEN-GVLSVILPK 149

>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A Length = 100

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 28/117 (23%)

Query: 17  WEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFL 76
            +E+         L  G+    +++ +  G L I  E                       
Sbjct: 9   IKEEVNHFVLYADLP-GIDPSQIEVQMDKGILSIRGE----------------------- 44

Query: 77  KKNEEARDTSSLNRP--NDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTF-KRQRA 130
           +K+E + +T   +R     G     F+LP   D DG + +  + GVL +   KR  A
Sbjct: 45  RKSESSTETERFSRIERRYGSFHRRFALPDSADADGITAAGRN-GVLEIRIPKRPAA 100

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.0 bits (108), Expect = 2e-05
 Identities = 52/377 (13%), Positives = 99/377 (26%), Gaps = 89/377 (23%)

Query: 5   VDRKKPDPVSAIWE---EDERS----VHFKVFLASGM----KQEDVKIVIQDGKLVIMTE 53
           V R    P   + +   E   +    +        G+    K      V    K+    +
Sbjct: 131 VSR--LQPYLKLRQALLELRPAKNVLID-------GVLGSGKTWVALDVCLSYKVQCKMD 181

Query: 54  -----ATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLN---RPNDGKIEMNF----- 100
                    +  SP +    +      +  N  +R   S N   R +  + E+       
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSK 241

Query: 101 ----SLPV--GV-DP---DGFSTSMDDAG--VLTLTFKRQRAFDLRNVAMGWEHAKDSKK 148
                L V   V +    + F     +    +L  T  +Q    L               
Sbjct: 242 PYENCLLVLLNVQNAKAWNAF-----NLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM 296

Query: 149 GFVDFKA--YLA--AGTKIEDLVVVIERGKYLIVGMLQKKEQEG-DTS--VKQYHGNNFR 201
                +    L      + +DL   +       + ++ +  ++G  T    K  + +   
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLT 356

Query: 202 SFLFPDGVDPFGFSTSMD--DAGVLTLTFKRLMPFLSST-VPEGAFENVIMGWDWEHAKD 258
           + +           +S++  +       F RL  F  S  +P        + W      D
Sbjct: 357 TII----------ESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLS---LIWFDVIKSD 403

Query: 259 SRKGFVDFKAYLAAGTKIEDLMIGIDGGKYLTIGMLEKKEHEGDTSL-----KQYEGNNF 313
                     Y     + ++  I I       I +  K + E + +L       Y   N 
Sbjct: 404 VMVVVNKLHKYSLVEKQPKESTISIPS-----IYLELKVKLENEYALHRSIVDHY---NI 455

Query: 314 RSFLLPDGLGP---FGY 327
                 D L P     Y
Sbjct: 456 PKTFDSDDLIPPYLDQY 472

>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A Length = 106

 Score = 39.8 bits (93), Expect = 2e-04
 Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 158 AAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTS 217
                 EDL V ++     I G   +++ +     +++H    R +  P  VD    S S
Sbjct: 20  VKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFH----RRYRLPSNVDQSALSCS 75

Query: 218 MDDAGVLTLTFKRLMPFLSSTVPE 241
           +   G+LT +  ++   + +   E
Sbjct: 76  LSADGMLTFSGPKIPSGVDAGHSE 99

>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A Length = 151

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 28/112 (25%)

Query: 17  WEEDERSVHFKVFLASGMKQEDVKIVIQDGK-LVIMTEATSSHSPSPSSASSSISSFFSF 75
           W+E   +  FK  L  G+K+E+VK+ ++DG  LV+  E                      
Sbjct: 48  WKETPEAHVFKADLP-GVKKEEVKVEVEDGNVLVVSGE---------------------- 84

Query: 76  LKKNEEARDTSSLNRP--NDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTF 125
            +  E+       +R   + GK    F L      +     +++ GVLT+T 
Sbjct: 85  -RTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGLEN-GVLTVTV 134

>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus} Length = 101

 Score = 37.8 bits (88), Expect = 7e-04
 Identities = 14/95 (14%), Positives = 32/95 (33%), Gaps = 6/95 (6%)

Query: 139 GWEHAKDSKKGFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGN 198
                      F      +      E++ V +      +    +++  E     +++H  
Sbjct: 2   AMAQVPTDPGYFS-VLLDVK-HFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFH-- 57

Query: 199 NFRSFLFPDGVDPFGFSTSMDDAGVLTLTFKRLMP 233
             R +  P GVDP   ++++   GVL++       
Sbjct: 58  --RRYRLPPGVDPAAVTSALSPEGVLSIQATPASA 90

>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A Length = 123

 Score = 38.0 bits (89), Expect = 9e-04
 Identities = 22/110 (20%), Positives = 34/110 (30%), Gaps = 29/110 (26%)

Query: 17  WEEDERSVHFKVFLASGMKQEDVKI-VIQDGKLVIMTEATSSHSPSPSSASSSISSFFSF 75
             E+   +     LA G  +E +K  V    +L+I  E                      
Sbjct: 29  MYEEGGYLVVVADLA-GFNKEKIKARVSGQNELIIEAE---------------------- 65

Query: 76  LKKNEEARDTSSLNRPNDGKIEMNFSLPVGVDPDGF-STSMDDAGVLTLT 124
            ++  E        RP    +     LP  V  D   S   ++ GVLT+ 
Sbjct: 66  -REITEPGVKYLTQRP--KYVRKVIRLPYNVAKDAEISGKYEN-GVLTIR 111

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	384
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	100.0
3gla_A	100	Low molecular weight heat shock protein; HSPA, SHP	99.93
4eld_A	161	MJ16.5-P1, small heat shock protein HSP16.5; chape	99.91
4fei_A	102	Heat shock protein-related protein; stress respons	99.91
1gme_A	151	Heat shock protein 16.9B; small heat shock protein	99.9
3aab_A	123	Putative uncharacterized protein ST1653; alpha-cry	99.88
3l1e_A	106	Alpha-crystallin A chain; lens transparency, polyd	99.87
2wj5_A	101	Heat shock protein beta-6; chaperone, disulfide bo	99.86
3q9p_A	85	Heat shock protein beta-1; alpha-crystallin domain	99.82
2y1y_A	90	Alpha-crystallin B chain,; small heat shock protei	99.8
2klr_A	175	Alpha-crystallin B chain; protein, dimer, oligomer	99.8
2bol_A	314	TSP36, small heat shock protein; A-crystallin, mol	99.74
3q9p_A	85	Heat shock protein beta-1; alpha-crystallin domain	99.07
3l1e_A	106	Alpha-crystallin A chain; lens transparency, polyd	99.01
2y1y_A	90	Alpha-crystallin B chain,; small heat shock protei	98.95
2wj5_A	101	Heat shock protein beta-6; chaperone, disulfide bo	98.93
4fei_A	102	Heat shock protein-related protein; stress respons	98.89
3gla_A	100	Low molecular weight heat shock protein; HSPA, SHP	98.83
2xcm_C	92	SGT1-like protein, cytosolic heat shock protein 90	98.81
1rl1_A	114	Suppressor of G2 allele of SKP1 homolog; beta sand	98.8
2klr_A	175	Alpha-crystallin B chain; protein, dimer, oligomer	98.77
4eld_A	161	MJ16.5-P1, small heat shock protein HSP16.5; chape	98.73
3aab_A	123	Putative uncharacterized protein ST1653; alpha-cry	98.6
1gme_A	151	Heat shock protein 16.9B; small heat shock protein	98.6
3eud_A	115	Protein SHQ1; CS domain HSP20-like domain SHQ1 H/A	97.63
2k8q_A	134	Protein SHQ1; beta-sandwich, CS domain, nucleus, s	97.57
1x5m_A	127	Calcyclin-binding protein; CS domain, structural g	97.25
1wh0_A	134	Ubiquitin carboxyl-terminal hydrolase 19; USP, CS	97.16
1ejf_A	125	Progesterone receptor P23; chaperone, CO-chaperone	96.94
1wgv_A	124	KIAA1068 protein; CS domain, HSP20-like fold, stru	96.68
3igf_A	374	ALL4481 protein; two-domained protein consisting o	96.59
1wfi_A	131	Nuclear distribution gene C homolog; NUDC, riken s	96.28
2o30_A	131	Nuclear movement protein; MCSG, structural genomic	96.15
3qor_A	121	Nuclear migration protein NUDC; beta-sandwich, cha	95.97
2kmw_A	150	Uncharacterized protein AT3G03773; protein structu	95.93
2cg9_X	134	CO-chaperone protein SBA1; chaperone complex, HSP9	95.88
2rh0_A	157	NUDC domain-containing protein 2; 13542905, nuclea	95.53
2xcm_C	92	SGT1-like protein, cytosolic heat shock protein 90	90.21
1rl1_A	114	Suppressor of G2 allele of SKP1 homolog; beta sand	87.06
1nkw_E	212	50S ribosomal protein L6; ribosome, large subunit,	84.17

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}

Probab=100.00  E-value=1.3e-34  Score=279.13  Aligned_cols=186  Identities=16%  Similarity=0.236  Sum_probs=150.0

Q ss_pred             CCCeeeEEEeCC----eEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCc
Q 016705           10 PDPVSAIWEEDE----RSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDT   85 (384)
Q Consensus        10 ~~P~VDV~ETDD----eyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~   85 (384)
                      +.|++||+|+++    +|+|.+  +|||++||||+|+++++.|+|+|+++....                          
T Consensus        97 ~~p~vDi~E~~~dgk~~~~v~~--dlPG~~~edI~V~v~~~~L~I~ge~~~~~e--------------------------  148 (314)
T 2bol_A           97 LDFLKDAYEVGKDGRLHFKVYF--NVKNFKAEEITIKADKNKLVVRAQKSVACG--------------------------  148 (314)
T ss_dssp             TGGGGGCEEECTTSSEEEEEEE--ECTTCCTTTEEEEEETTEEEEEECCBSSTT--------------------------
T ss_pred             CCCccceEEcCCCCceEEEEEE--ECCCCchHHeEEEEECCEEEEEEEEeccCC--------------------------
Confidence            569999999999    999998  999999999999999999999998863211                          


Q ss_pred             eEEeecccceEEEEEECCCCcccCcceEEee-cCcEEEEEEeecCCCCcceEEe------------------------cc
Q 016705           86 SSLNRPNDGKIEMNFSLPVGVDPDGFSTSMD-DAGVLTLTFKRQRAFDLRNVAM------------------------GW  140 (384)
Q Consensus        86 ~~~rERs~GsFsRsI~LPe~VD~dkIkAsLe-NdGVLTITLPK~epe~~RrIaI------------------------g~  140 (384)
                         .+|.+|+|+|+|.||.+||+++|+|+|+ | |||+|++||.+++. +.|+|                        |.
T Consensus       149 ---~~r~~g~F~R~~~LP~~Vd~e~i~A~~~~n-GVL~I~lPK~~~~~-~~I~it~~~ql~Iqp~s~~q~~l~vkg~~~~  223 (314)
T 2bol_A          149 ---DAAMSESVGRSIPLPPSVDRNHIQATITTD-DVLVIEAPVNEPNY-KAIKLSPEKGLAIQPSEVQERQLAVKNKEGL  223 (314)
T ss_dssp             ---CCCBCCCEEEEEECCTTBCGGGCEEEECSS-SEEEEEEEBSSCCT-TTEEEETTTEEEECCBCCSSCCSCCCSCCEE
T ss_pred             ---CCEEEEEEEEEEECCCCccccccEEEEeCC-CEEEEEEeccCccc-ceeecccCCccCcCCCccccceeecccCCCC
Confidence               1267899999999999999999999999 8 99999999998763 44543                        12


Q ss_pred             ccccCCCCce-EEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEe
Q 016705          141 EHAKDSKKGF-VDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMD  219 (384)
Q Consensus       141 ~~~~~~~~g~-~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~  219 (384)
                      +..++..+|. ++|++.||||+++|||+|.|++|.+.|+|.+...+.+...+.+.| +.|.|+|.+|++|||-.++|++.
T Consensus       224 ~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~-g~F~R~~~LP~~vd~~~i~A~~~  302 (314)
T 2bol_A          224 EIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEH-REFYKAFVTPEVVDASKTQAEIV  302 (314)
T ss_dssp             EEEECTTSCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------C-EEEEEEEECSSEECGGGCEEEEE
T ss_pred             cEEEecCCCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEee-eEEEEEEECCCCcChHHeEEEEe
Confidence            2333443555 999999999999999999999999999998544322222234434 89999999999999999999996


Q ss_pred             cceeEEEEehh
Q 016705          220 DAGVLTLTFKR  230 (384)
Q Consensus       220 d~~~~~~~~~~  230 (384)
                       |||||++.-+
T Consensus       303 -dGvL~i~~Pk  312 (314)
T 2bol_A          303 -DGLMVVEAPL  312 (314)
T ss_dssp             -TTEEEEEEEE
T ss_pred             -CCEEEEEEec
Confidence             7999999644

>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A

Probab=99.93  E-value=1.8e-25  Score=179.18  Aligned_cols=98  Identities=24%  Similarity=0.338  Sum_probs=87.9

Q ss_pred             CCCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEE
Q 016705            9 KPDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSL   88 (384)
Q Consensus         9 ~~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~   88 (384)
                      .+.|++||+|++++|+|.+  +|||++++||+|+++++.|+|+|++.......                     ..+|++
T Consensus         2 ~~~P~~di~e~~~~~~v~~--~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~---------------------~~~~~~   58 (100)
T 3gla_A            2 QWVPRVDIKEEVNHFVLYA--DLPGIDPSQIEVQMDKGILSIRGERKSESSTE---------------------TERFSR   58 (100)
T ss_dssp             CSCCCEEEEECSSEEEEEE--ECTTSCGGGCEEEEETTEEEEEEEECCGGGSS---------------------GGGEEE
T ss_pred             CccCcEEEEECCCEEEEEE--ECCCCCHHHEEEEEECCEEEEEEEEcCcCccC---------------------CccEEE
Confidence            5899999999999999999  99999999999999999999999987543211                     126899


Q ss_pred             eecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCC
Q 016705           89 NRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRA  130 (384)
Q Consensus        89 rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~ep  130 (384)
                      +||.+|+|+|+|.||.+||+++|+|+|+| |||+|++||.++
T Consensus        59 ~er~~g~f~r~~~LP~~vd~~~i~A~~~~-GvL~I~~pK~~~   99 (100)
T 3gla_A           59 IERRYGSFHRRFALPDSADADGITAAGRN-GVLEIRIPKRPA   99 (100)
T ss_dssp             ECCCCEEEEEEEECCTTBCTTSCEEEEET-TEEEEEEEBC--
T ss_pred             EeecceEEEEEEECCCCcChHHeEEEEeC-CEEEEEEecCCC
Confidence            99999999999999999999999999999 999999999875

>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A

Probab=99.91  E-value=1.7e-24  Score=188.19  Aligned_cols=105  Identities=16%  Similarity=0.239  Sum_probs=94.5

Q ss_pred             CCCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEE
Q 016705            9 KPDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSL   88 (384)
Q Consensus         9 ~~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~   88 (384)
                      .+.| +||+|++++|+|.+  +|||++++||+|+++++.|+|+|+++.......                     .+|++
T Consensus        55 ~~~p-vdi~e~~~~~~v~~--dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~---------------------~~~~~  110 (161)
T 4eld_A           55 GFMP-ISIIEGDQHIKVIA--WLPGVNKEDIILNAVGDTLEIRAKRSPLMITES---------------------ERIIY  110 (161)
T ss_dssp             SCCC-EEEEECSSEEEEEE--ECTTCCGGGEEEEEETTEEEEEEECCCCCCCSS---------------------CEEEE
T ss_pred             cccc-eeEEEeCCEEEEEE--ECCCCChHhEEEEEECCEEEEEEEEcccccCCC---------------------ceEEE
Confidence            4455 99999999999999  999999999999999999999999875433221                     25889


Q ss_pred             eec-ccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCCCcceEEe
Q 016705           89 NRP-NDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDLRNVAM  138 (384)
Q Consensus        89 rER-s~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe~~RrIaI  138 (384)
                      +|| .+|+|+|+|.||.+||.++|+|+|+| |||+|++||.+..++|+|+|
T Consensus       111 ~Er~~~g~f~R~~~LP~~vd~~~i~A~~~n-GvL~I~lpK~~~~~~r~I~I  160 (161)
T 4eld_A          111 SEIPEEEEIYRTIKLPATVKEENASAKFEN-GVLSVILPKAESSIKKGINI  160 (161)
T ss_dssp             ECSCCCCEEEEEEECSSCBCGGGCEEEEET-TEEEEEEEBCGGGSCCCCCC
T ss_pred             EEeeccccEEEEEECCCCcccccEEEEEEC-CEEEEEEEcCCCCCCcEeec
Confidence            999 99999999999999999999999999 99999999999999999987

>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}

Probab=99.91  E-value=3.4e-24  Score=173.90  Aligned_cols=95  Identities=17%  Similarity=0.246  Sum_probs=87.3

Q ss_pred             CCCCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceE
Q 016705            8 KKPDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSS   87 (384)
Q Consensus         8 ~~~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~   87 (384)
                      ..+.|++||+|++++|+|.+  +|||++++||+|+++++.|+|+|+++.+     .                     +|+
T Consensus         3 g~~~P~~di~e~~~~~~v~~--~lPG~~~edi~v~~~~~~L~I~g~~~~~-----~---------------------~~~   54 (102)
T 4fei_A            3 GPWTPAADWRDAGTHLDLLL--DVPGVDAGTLALAEDGGQLTVSGERPGT-----E---------------------HLL   54 (102)
T ss_dssp             EECCCCEEEEEETTEEEEEE--ECTTCCGGGCEEEEETTEEEEEEEECCC-----S---------------------SCS
T ss_pred             CcccCcEEEEEcCCEEEEEE--ECCCCchHhEEEEEECCEEEEEEEEecC-----C---------------------CEE
Confidence            35889999999999999999  9999999999999999999999998431     1                     467


Q ss_pred             EeecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCC
Q 016705           88 LNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAF  131 (384)
Q Consensus        88 ~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe  131 (384)
                      .+||.+|+|+|+|.||.+||+++++|+|+| |||+|++||.++.
T Consensus        55 ~~er~~g~f~R~~~LP~~vd~~~i~A~~~~-GvL~I~lpK~~~~   97 (102)
T 4fei_A           55 RSERPSGRFVRELAFPEPVRPASGVASLAG-GVLTVRFEKLRPT   97 (102)
T ss_dssp             SCCSEEEEEEEEEECSSCBCTTCCEEEEET-TEEEEEEEBSSCC
T ss_pred             EEEEeccEEEEEEECCCCcchhHcEEEEEC-CEEEEEEEccCcc
Confidence            799999999999999999999999999999 9999999998875

>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A

Probab=99.90  E-value=6.3e-24  Score=184.12  Aligned_cols=106  Identities=21%  Similarity=0.260  Sum_probs=92.9

Q ss_pred             CCCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEE-CCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceE
Q 016705            9 KPDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQ-DGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSS   87 (384)
Q Consensus         9 ~~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVd-ddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~   87 (384)
                      .+.|++||+|++++|+|.+  +|||++++||+|+++ ++.|+|+|+++.....+.                     .+|+
T Consensus        41 ~~~p~~di~e~~d~~~v~~--dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~---------------------~~~~   97 (151)
T 1gme_A           41 FANARMDWKETPEAHVFKA--DLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKN---------------------DKWH   97 (151)
T ss_dssp             HGGGCEEEEECSSEEEEEE--ECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTT---------------------CEEE
T ss_pred             ccCCceEEEEcCCEEEEEE--ECCCCChHHEEEEEecCCEEEEEEEEccccccCC---------------------ceEE
Confidence            3579999999999999999  999999999999995 689999998865543221                     2689


Q ss_pred             EeecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCCCc--ceEEe
Q 016705           88 LNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDL--RNVAM  138 (384)
Q Consensus        88 ~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe~~--RrIaI  138 (384)
                      ++||.+|+|+|+|.||.+||.++|+|+|+| |||+|++||..++++  |+|+|
T Consensus        98 ~~Er~~g~F~R~~~LP~~vd~~~i~A~~~n-GvL~I~lPK~~~~~~~~~~I~I  149 (151)
T 1gme_A           98 RVERSSGKFVRRFRLLEDAKVEEVKAGLEN-GVLTVTVPKAEVKKPEVKAIQI  149 (151)
T ss_dssp             ECCCCCCCEEEEEECSSCCCGGGCEEEEET-TEEEEEEECCCCCTTCCCCCCC
T ss_pred             EEeEeccEEEEEEECCCCccccceEEEEEC-CEEEEEEEccCcCCCCCeEeee
Confidence            999999999999999999999999999999 999999999987655  66665

>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A

Probab=99.88  E-value=1.8e-22  Score=168.31  Aligned_cols=95  Identities=22%  Similarity=0.291  Sum_probs=86.9

Q ss_pred             CCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEEC-CEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEE
Q 016705           10 PDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQD-GKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSL   88 (384)
Q Consensus        10 ~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdd-dvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~   88 (384)
                      +.|++||+|++++|++.+  +|||++++||+|++++ +.|+|+|+++...   .                     .+|+.
T Consensus        23 ~~P~~di~e~~~~~~v~~--~lPG~~~edi~V~v~~~~~L~I~g~~~~~~---~---------------------~~~~~   76 (123)
T 3aab_A           23 VYPPVDMYEEGGYLVVVA--DLAGFNKEKIKARVSGQNELIIEAEREITE---P---------------------GVKYL   76 (123)
T ss_dssp             HCSCEEEEEETTEEEEEE--ECCSCCGGGCEEEEETTTEEEEEEECCCCC---C---------------------SCEEE
T ss_pred             CCCcEEEEEcCCEEEEEE--ECCCCCHHHEEEEEeCCCEEEEEEEEeccC---C---------------------CeEEE
Confidence            469999999999999999  9999999999999999 9999999986543   1                     15889


Q ss_pred             eecccceEEEEEECCCCcccCcc-eEEeecCcEEEEEEeecCCCC
Q 016705           89 NRPNDGKIEMNFSLPVGVDPDGF-STSMDDAGVLTLTFKRQRAFD  132 (384)
Q Consensus        89 rERs~GsFsRsI~LPe~VD~dkI-kAsLeNdGVLTITLPK~epe~  132 (384)
                      +||.+ +|+|+|.||.+||.++| +|+|+| |||+|++||.+..+
T Consensus        77 ~Er~~-~f~R~~~LP~~vd~~~i~~A~~~~-GvL~I~lPK~~~~~  119 (123)
T 3aab_A           77 TQRPK-YVRKVIRLPYNVAKDAEISGKYEN-GVLTIRIPIAGTSV  119 (123)
T ss_dssp             ECSCS-EEEEEEECSSEECTTCCCEEEEET-TEEEEEEEGGGEEC
T ss_pred             EEEeE-EEEEEEECCCCcCcchhCeeEEcC-CEEEEEEEcCCCCc
Confidence            99999 99999999999999999 999999 99999999988654

>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A

Probab=99.87  E-value=1.2e-21  Score=161.06  Aligned_cols=98  Identities=18%  Similarity=0.279  Sum_probs=84.9

Q ss_pred             CCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEee
Q 016705           11 DPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNR   90 (384)
Q Consensus        11 ~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rE   90 (384)
                      .+..||+|++++|+|.+  +||||+++||+|+++++.|+|+|++.....  +.                     .|+.+ 
T Consensus         2 sg~~~i~e~~~~~~v~~--dlPG~~~edi~V~v~~~~L~I~g~~~~~~~--~~---------------------~~~~~-   55 (106)
T 3l1e_A            2 SGISEVRSDRDKFVIFL--DVKHFSPEDLTVKVQEDFVEIHGKHNERQD--DH---------------------GYISR-   55 (106)
T ss_dssp             CCSEEEEECSSEEEEEE--ECTTSCGGGEEEEEETTEEEEEEEEEEEET--TT---------------------EEEEE-
T ss_pred             CCceEEEEcCCEEEEEE--ECCCCChHHEEEEEECCEEEEEEEEccccC--CC---------------------CEEEE-
Confidence            35589999999999999  999999999999999999999999764322  11                     24444 


Q ss_pred             cccceEEEEEECCCCcccCcceEEe-ecCcEEEEEEeecCCC-----CcceEEec
Q 016705           91 PNDGKIEMNFSLPVGVDPDGFSTSM-DDAGVLTLTFKRQRAF-----DLRNVAMG  139 (384)
Q Consensus        91 Rs~GsFsRsI~LPe~VD~dkIkAsL-eNdGVLTITLPK~epe-----~~RrIaIg  139 (384)
                          +|+|+|.||.+||+++|+|+| +| |||+|++||.+++     ++|+|+|.
T Consensus        56 ----eF~R~~~LP~~vd~~~i~A~~s~~-GvL~I~~PK~~~~~~~~~~~r~I~I~  105 (106)
T 3l1e_A           56 ----EFHRRYRLPSNVDQSALSCSLSAD-GMLTFSGPKIPSGVDAGHSERAIPVS  105 (106)
T ss_dssp             ----EEEEEEECCTTBCTTSCEEEECTT-SEEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred             ----EEEEEEECCCCcChhHcEEEECCC-CEEEEEEEccCcccccCCCCeEeeec
Confidence                599999999999999999999 78 9999999999886     67999885

>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}

Probab=99.86  E-value=1.2e-21  Score=159.55  Aligned_cols=96  Identities=11%  Similarity=0.178  Sum_probs=82.6

Q ss_pred             eeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecc
Q 016705           13 VSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPN   92 (384)
Q Consensus        13 ~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs   92 (384)
                      .+||+|++++|+|.+  +|||++++||+|+++++.|+|+|++.....  +.                     .|+.+|  
T Consensus         3 ~vdi~e~~~~~~v~~--dlPG~~~edI~V~v~~~~L~I~g~~~~~~~--~~---------------------~~~~~e--   55 (101)
T 2wj5_A            3 MAQVPTDPGYFSVLL--DVKHFSPEEISVKVVGDHVEVHARHEERPD--EH---------------------GFIARE--   55 (101)
T ss_dssp             CCCCCCCSSCEEEEE--ECTTSCGGGEEEEEETTEEEEEEEEEECSS--TT---------------------CCEEEE--
T ss_pred             cEEEEEeCCEEEEEE--ECCCCcHHHeEEEEECCEEEEEEEEecccC--CC---------------------CEEEEE--
Confidence            479999999999998  999999999999999999999999975421  11                     355554  


Q ss_pred             cceEEEEEECCCCcccCcceEEe-ecCcEEEEEEeecCCCCcceEEec
Q 016705           93 DGKIEMNFSLPVGVDPDGFSTSM-DDAGVLTLTFKRQRAFDLRNVAMG  139 (384)
Q Consensus        93 ~GsFsRsI~LPe~VD~dkIkAsL-eNdGVLTITLPK~epe~~RrIaIg  139 (384)
                         |+|+|.||.+||+++|+|+| +| |||+|++||.++.++|.++|-
T Consensus        56 ---F~R~~~LP~~vd~~~i~A~~s~n-GvL~I~lPK~~~~~~~~~~i~   99 (101)
T 2wj5_A           56 ---FHRRYRLPPGVDPAAVTSALSPE-GVLSIQATPASAQASLPSPPA   99 (101)
T ss_dssp             ---EEEEEECCTTBCTTCCEEEECTT-SEEEEEECBCCCCCSSCC---
T ss_pred             ---EEEEEECCCCcChhHCEEEECCC-CEEEEEEECCCcCCCCCCccc
Confidence               99999999999999999999 78 999999999999988887763

>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A

Probab=99.82  E-value=4.8e-20  Score=145.90  Aligned_cols=82  Identities=18%  Similarity=0.242  Sum_probs=69.4

Q ss_pred             EEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccce
Q 016705           16 IWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGK   95 (384)
Q Consensus        16 V~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~Gs   95 (384)
                      +.|++++|+|.+  +|||++++||+|+++++.|+|+|+++.....                            .+..+++
T Consensus         2 ~~E~~~~~~v~~--dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~----------------------------~~~~~~~   51 (85)
T 3q9p_A            2 GSHTADRWRVSL--DVNHFAPDELTVKTKDGVVEITGKHAARQDE----------------------------HGYISRC   51 (85)
T ss_dssp             -CCCCCEEEEEE--ECTTTCCSEEEEEEETTEEEEEEEEC-----------------------------------CCCEE
T ss_pred             ccCcCCEEEEEE--ECCCCChHHEEEEEECCEEEEEEEEccccCC----------------------------CCEEEEE
Confidence            468999999999  9999999999999999999999998654211                            1123569


Q ss_pred             EEEEEECCCCcccCcceEEee-cCcEEEEEEeec
Q 016705           96 IEMNFSLPVGVDPDGFSTSMD-DAGVLTLTFKRQ  128 (384)
Q Consensus        96 FsRsI~LPe~VD~dkIkAsLe-NdGVLTITLPK~  128 (384)
                      |+|+|.||.+||+++|+|+|+ | |||+|++||.
T Consensus        52 F~R~~~LP~~vd~~~i~A~~~~~-GvL~I~lPK~   84 (85)
T 3q9p_A           52 FTRKYTLPPGVDPTQVSSSLSPE-GTLTVEAPMP   84 (85)
T ss_dssp             EEEEEECCTTCCGGGCEEEECTT-SEEEEEEECC
T ss_pred             EEEEEECCCCcChHHcEEEECCC-CEEEEEEEcC
Confidence            999999999999999999998 8 9999999995

>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A

Probab=99.80  E-value=2e-19  Score=143.20  Aligned_cols=86  Identities=19%  Similarity=0.247  Sum_probs=68.2

Q ss_pred             EeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccceEE
Q 016705           18 EEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGKIE   97 (384)
Q Consensus        18 ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~GsFs   97 (384)
                      ++++.|+|.+  +|||++++||+|+++++.|+|+|++.....  .                     ..|+.+     +|+
T Consensus         3 ~~~~~~~v~~--dlPG~~~edi~V~v~~~~L~I~g~~~~~~~--~---------------------~~~~~~-----ef~   52 (90)
T 2y1y_A            3 MEKDRFSVNL--DVKHFSPEELKVKVLGDVIEVHGKHEERQD--E---------------------HGFISR-----EFH   52 (90)
T ss_dssp             ---CCEEEEE--ECTTSCGGGEEEEEETTEEEEEEEEEEEEC--S---------------------SSEEEE-----EEE
T ss_pred             cCCCEEEEEE--ECCCCcHHHeEEEEECCEEEEEEEEecccC--C---------------------CCEEEE-----EEE
Confidence            6789999999  999999999999999999999999875421  1                     135555     499


Q ss_pred             EEEECCCCcccCcceEEe-ecCcEEEEEEeecCCCCcc
Q 016705           98 MNFSLPVGVDPDGFSTSM-DDAGVLTLTFKRQRAFDLR  134 (384)
Q Consensus        98 RsI~LPe~VD~dkIkAsL-eNdGVLTITLPK~epe~~R  134 (384)
                      |+|.||.+||.++|+|+| +| |||+|++||.+++++|
T Consensus        53 R~~~LP~~vd~~~i~A~~~~~-GvL~I~~pK~~~~~p~   89 (90)
T 2y1y_A           53 RKYRIPADVDPLTITSSMSSD-GVLTVNGPRKQVSGPE   89 (90)
T ss_dssp             EEEECCTTBCGGGCEEEECTT-SEEEEEECBC------
T ss_pred             EEEECCCCcChhHcEEEECCC-CEEEEEEEcCCCCCCC
Confidence            999999999999999999 78 9999999999887766

>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A

Probab=99.80  E-value=1.2e-19  Score=161.99  Aligned_cols=97  Identities=19%  Similarity=0.260  Sum_probs=71.9

Q ss_pred             eeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeeccc
Q 016705           14 SAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPND   93 (384)
Q Consensus        14 VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~   93 (384)
                      +||+|++++|+|.+  +|||+++|||+|+++++.|+|+|+++....  +                     ..|+.+    
T Consensus        66 ~dv~e~~d~~~v~~--dlPG~~~edI~V~v~~~~L~I~g~~~~~~~--~---------------------~~~~~r----  116 (175)
T 2klr_A           66 SEMRLEKDRFSVNL--DVKHFSPEELKVKVLGDVIEVHGKHEERQD--E---------------------HGFISR----  116 (175)
T ss_dssp             ---CCCCSEEEEEE--CCSSCCGGGEEEEEETTEEEEEEEEEEEEE--T---------------------TEEEEE----
T ss_pred             eEEEEcCCeEEEEE--ECCCCChHHEEEEEECCEEEEEEEEccccc--C---------------------CceEEE----
Confidence            79999999999999  999999999999999999999999865421  1                     135555    


Q ss_pred             ceEEEEEECCCCcccCcceEEe-ecCcEEEEEEeecCCCC-cceEEeccc
Q 016705           94 GKIEMNFSLPVGVDPDGFSTSM-DDAGVLTLTFKRQRAFD-LRNVAMGWE  141 (384)
Q Consensus        94 GsFsRsI~LPe~VD~dkIkAsL-eNdGVLTITLPK~epe~-~RrIaIg~~  141 (384)
                       +|+|+|.||.+||.++|+|+| +| |||+|++||.+..+ .|+|+|..+
T Consensus       117 -eF~R~~~LP~~Vd~~~i~A~~s~d-GvL~I~lPK~~~~~~~r~I~I~~~  164 (175)
T 2klr_A          117 -EFHRKYRIPADVDPLTITSSLSSD-GVLTVNGPRKQVSGPERTIPITRE  164 (175)
T ss_dssp             -EEEEEEECTTTCCTTTCEEEECTT-SCEEEEEECC--------------
T ss_pred             -EEEEEEECCCCcChhHeEEEEcCC-CEEEEEEECCCCCCCCeEEEEecC
Confidence             499999999999999999999 68 99999999988755 499999654

>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}

Probab=99.74  E-value=4.7e-18  Score=164.10  Aligned_cols=91  Identities=13%  Similarity=0.128  Sum_probs=71.5

Q ss_pred             CCeeeEEEeC---CeEEEEEeccC-CCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCce
Q 016705           11 DPVSAIWEED---ERSVHFKVFLA-SGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTS   86 (384)
Q Consensus        11 ~P~VDV~ETD---DeyII~A~FDL-PGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~   86 (384)
                      ...++|.+++   ++|++.+  +| ||++|+||+|+++++.|+|+|+++.+..                         .+
T Consensus       220 ~~~~~i~e~~~~~~~~~v~~--~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~-------------------------~~  272 (314)
T 2bol_A          220 KEGLEIVTAEDGSKKIHLEL--KVDPHFAPKDVKVWAKGNKVYVHGVTGKEEK-------------------------TE  272 (314)
T ss_dssp             CCEEEEEECTTSCEEEEEEE--ECCTTCCGGGEEEEESSSEEEEEEEEC-------------------------------
T ss_pred             CCCCcEEEecCCCcEEEEEE--EcCCCCChHHeEEEEECCEEEEEEEEeccCC-------------------------ce
Confidence            4557888876   3566666  99 9999999999999999999999875422                         26


Q ss_pred             EEeecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecC
Q 016705           87 SLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQR  129 (384)
Q Consensus        87 ~~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~e  129 (384)
                      +++||.+|+|+|+|.||++||+++|+|+|+| |||+|++||..
T Consensus       273 ~~~Er~~g~F~R~~~LP~~vd~~~i~A~~~d-GvL~i~~Pk~~  314 (314)
T 2bol_A          273 NASHSEHREFYKAFVTPEVVDASKTQAEIVD-GLMVVEAPLFK  314 (314)
T ss_dssp             ------CEEEEEEEECSSEECGGGCEEEEET-TEEEEEEEEEC
T ss_pred             EEEEEeeeEEEEEEECCCCcChHHeEEEEeC-CEEEEEEecCC
Confidence            7789999999999999999999999999999 99999999963

>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A

Probab=99.07  E-value=6.4e-10  Score=87.80  Aligned_cols=76  Identities=22%  Similarity=0.260  Sum_probs=59.6

Q ss_pred             ceEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEe
Q 016705          149 GFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTF  228 (384)
Q Consensus       149 g~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~  228 (384)
                      ..+.|++.| ||+++|||.|.++.|.+.|+|.+...+.+..  .  +++.|.|+|.+|+.|||=.++|++..||||+++.
T Consensus         7 ~~~~v~~dl-PG~~~edi~V~v~~~~L~I~g~~~~~~~~~~--~--~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~l   81 (85)
T 3q9p_A            7 DRWRVSLDV-NHFAPDELTVKTKDGVVEITGKHAARQDEHG--Y--ISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEA   81 (85)
T ss_dssp             CEEEEEEEC-TTTCCSEEEEEEETTEEEEEEEEC---------C--CCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEE
T ss_pred             CEEEEEEEC-CCCChHHEEEEEECCEEEEEEEEccccCCCC--E--EEEEEEEEEECCCCcChHHcEEEECCCCEEEEEE
Confidence            346666766 8999999999999999999998544322111  1  2367889999999999999999999899999986


Q ss_pred             h
Q 016705          229 K  229 (384)
Q Consensus       229 ~  229 (384)
                      .
T Consensus        82 P   82 (85)
T 3q9p_A           82 P   82 (85)
T ss_dssp             E
T ss_pred             E
Confidence            4

>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A

Probab=99.01  E-value=1.8e-09  Score=88.48  Aligned_cols=79  Identities=19%  Similarity=0.216  Sum_probs=63.4

Q ss_pred             eEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEeh
Q 016705          150 FVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFK  229 (384)
Q Consensus       150 ~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~~  229 (384)
                      .+.|++.| |||++|||.|.++.|.+.|+|.+..+. +..   ..++.+|.|+|.+|+.||+=.++|++..||||++++.
T Consensus        13 ~~~v~~dl-PG~~~edi~V~v~~~~L~I~g~~~~~~-~~~---~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL~I~~P   87 (106)
T 3l1e_A           13 KFVIFLDV-KHFSPEDLTVKVQEDFVEIHGKHNERQ-DDH---GYISREFHRRYRLPSNVDQSALSCSLSADGMLTFSGP   87 (106)
T ss_dssp             EEEEEEEC-TTSCGGGEEEEEETTEEEEEEEEEEEE-TTT---EEEEEEEEEEEECCTTBCTTSCEEEECTTSEEEEEEE
T ss_pred             EEEEEEEC-CCCChHHEEEEEECCEEEEEEEEcccc-CCC---CEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEE
Confidence            35566666 899999999999999999999854432 211   1133567799999999999999999988999999998


Q ss_pred             hhcc
Q 016705          230 RLMP  233 (384)
Q Consensus       230 ~~~~  233 (384)
                      +.-|
T Consensus        88 K~~~   91 (106)
T 3l1e_A           88 KIPS   91 (106)
T ss_dssp             BCCC
T ss_pred             ccCc
Confidence            7665

>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A

Probab=98.95  E-value=4.4e-09  Score=83.50  Aligned_cols=76  Identities=22%  Similarity=0.287  Sum_probs=61.7

Q ss_pred             eEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeec-cccceEeeCCCccCcceeeEEEecceeEEEEe
Q 016705          150 FVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYH-GNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTF  228 (384)
Q Consensus       150 ~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h-~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~  228 (384)
                      .+.|++.| ||+++|||.|.++.|.+.|+|.+.. ++++    ..|| .+|.|+|.+|+.||+=.++|++..||||++++
T Consensus         7 ~~~v~~dl-PG~~~edi~V~v~~~~L~I~g~~~~-~~~~----~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~   80 (90)
T 2y1y_A            7 RFSVNLDV-KHFSPEELKVKVLGDVIEVHGKHEE-RQDE----HGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNG   80 (90)
T ss_dssp             CEEEEEEC-TTSCGGGEEEEEETTEEEEEEEEEE-EECS----SSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEE
T ss_pred             EEEEEEEC-CCCcHHHeEEEEECCEEEEEEEEec-ccCC----CCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEE
Confidence            36666776 7999999999999999999998544 2221    1243 56779999999999999999998899999998


Q ss_pred             hhh
Q 016705          229 KRL  231 (384)
Q Consensus       229 ~~~  231 (384)
                      .+.
T Consensus        81 pK~   83 (90)
T 2y1y_A           81 PRK   83 (90)
T ss_dssp             CBC
T ss_pred             EcC
Confidence            664

>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}

Probab=98.93  E-value=6.5e-09  Score=84.39  Aligned_cols=79  Identities=14%  Similarity=0.216  Sum_probs=62.8

Q ss_pred             eEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEeh
Q 016705          150 FVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFK  229 (384)
Q Consensus       150 ~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~~  229 (384)
                      .+.+++.| ||+++|||.|.++.|.+.|+|.+.. ++++   .+-++.+|.|+|.+|+.||+=.++|++..||||++++.
T Consensus        12 ~~~v~~dl-PG~~~edI~V~v~~~~L~I~g~~~~-~~~~---~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL~I~lP   86 (101)
T 2wj5_A           12 YFSVLLDV-KHFSPEEISVKVVGDHVEVHARHEE-RPDE---HGFIAREFHRRYRLPPGVDPAAVTSALSPEGVLSIQAT   86 (101)
T ss_dssp             CEEEEEEC-TTSCGGGEEEEEETTEEEEEEEEEE-CSST---TCCEEEEEEEEEECCTTBCTTCCEEEECTTSEEEEEEC
T ss_pred             EEEEEEEC-CCCcHHHeEEEEECCEEEEEEEEec-ccCC---CCEEEEEEEEEEECCCCcChhHCEEEECCCCEEEEEEE
Confidence            35666766 7999999999999999999998543 2221   11133567799999999999999999988999999987


Q ss_pred             hhcc
Q 016705          230 RLMP  233 (384)
Q Consensus       230 ~~~~  233 (384)
                      +.-+
T Consensus        87 K~~~   90 (101)
T 2wj5_A           87 PASA   90 (101)
T ss_dssp             BCCC
T ss_pred             CCCc
Confidence            6543

>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}

Probab=98.89  E-value=8.9e-09  Score=83.27  Aligned_cols=80  Identities=25%  Similarity=0.384  Sum_probs=64.0

Q ss_pred             eEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEeh
Q 016705          150 FVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTFK  229 (384)
Q Consensus       150 ~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~~  229 (384)
                      .+.|++.| ||++.|||.|.++.|.+.|+|... .+..-....+.| +.|.|+|.+|+.||+=.++|++. ||||++++.
T Consensus        17 ~~~v~~~l-PG~~~edi~v~~~~~~L~I~g~~~-~~~~~~~~er~~-g~f~R~~~LP~~vd~~~i~A~~~-~GvL~I~lp   92 (102)
T 4fei_A           17 HLDLLLDV-PGVDAGTLALAEDGGQLTVSGERP-GTEHLLRSERPS-GRFVRELAFPEPVRPASGVASLA-GGVLTVRFE   92 (102)
T ss_dssp             EEEEEEEC-TTCCGGGCEEEEETTEEEEEEEEC-CCSSCSSCCSEE-EEEEEEEECSSCBCTTCCEEEEE-TTEEEEEEE
T ss_pred             EEEEEEEC-CCCchHhEEEEEECCEEEEEEEEe-cCCCEEEEEEec-cEEEEEEECCCCcchhHcEEEEE-CCEEEEEEE
Confidence            46666766 799999999999999999999853 233333333334 78889999999999999999995 899999998


Q ss_pred             hhcc
Q 016705          230 RLMP  233 (384)
Q Consensus       230 ~~~~  233 (384)
                      +.-|
T Consensus        93 K~~~   96 (102)
T 4fei_A           93 KLRP   96 (102)
T ss_dssp             BSSC
T ss_pred             ccCc
Confidence            7654

>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A

Probab=98.83  E-value=1.6e-08  Score=80.69  Aligned_cols=79  Identities=23%  Similarity=0.390  Sum_probs=60.6

Q ss_pred             ceEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcc----eeeeccccceEeeCCCccCcceeeEEEecceeE
Q 016705          149 GFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTS----VKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVL  224 (384)
Q Consensus       149 g~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~----~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~  224 (384)
                      ..+.|++.| ||+++|||.|.++.|.+.|+|.......+....    .+.| +.|.|+|.+|+.||+=.++|++. ||||
T Consensus        14 ~~~~v~~~l-PG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~-g~f~r~~~LP~~vd~~~i~A~~~-~GvL   90 (100)
T 3gla_A           14 NHFVLYADL-PGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRY-GSFHRRFALPDSADADGITAAGR-NGVL   90 (100)
T ss_dssp             SEEEEEEEC-TTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCC-EEEEEEEECCTTBCTTSCEEEEE-TTEE
T ss_pred             CEEEEEEEC-CCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecc-eEEEEEEECCCCcChHHeEEEEe-CCEE
Confidence            346666666 899999999999999999999754432221111    1112 57889999999999999999996 6999


Q ss_pred             EEEehh
Q 016705          225 TLTFKR  230 (384)
Q Consensus       225 ~~~~~~  230 (384)
                      ++++.+
T Consensus        91 ~I~~pK   96 (100)
T 3gla_A           91 EIRIPK   96 (100)
T ss_dssp             EEEEEB
T ss_pred             EEEEec
Confidence            999865

>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*

Probab=98.81  E-value=1.2e-08  Score=79.59  Aligned_cols=82  Identities=13%  Similarity=0.157  Sum_probs=72.3

Q ss_pred             CCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEee
Q 016705           11 DPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNR   90 (384)
Q Consensus        11 ~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rE   90 (384)
                      .|++|++++++.+.|++  .+||+.+++++|+++++.|.|++...      .+                           
T Consensus         2 ~~~~~W~Qt~~~V~v~i--~~~~v~~~~v~v~~~~~~l~v~~~~~------~~---------------------------   46 (92)
T 2xcm_C            2 KYRHEYYQKPEEVVVTV--FAKGIPKQNVNIDFGEQILSVVIEVP------GE---------------------------   46 (92)
T ss_dssp             CSEEEEEEETTEEEEEE--ECCSCCGGGEEEEECSSBEEEEECCT------TS---------------------------
T ss_pred             CccccEEeCCCEEEEEE--EECCCChHHeEEEEECCEEEEEEEcC------CC---------------------------
Confidence            58999999999999988  99999999999999999999987431      11                           


Q ss_pred             cccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCC
Q 016705           91 PNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAF  131 (384)
Q Consensus        91 Rs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe  131 (384)
                         ..|...+.|+..|++++.++++.+ |.|.|+|+|..+.
T Consensus        47 ---~~y~~~~~L~~~I~~~~s~~~~~~-~~l~i~L~K~~~~   83 (92)
T 2xcm_C           47 ---DAYYLQPRLFGKIIPDKCKYEVLS-TKIEICLAKADII   83 (92)
T ss_dssp             ---CCEEECCBBSSCBCGGGCEEEECS-SCEEEEEEBSSSC
T ss_pred             ---cEEEEeeEcCCccCchhEEEEEEC-CEEEEEEEcCCCC
Confidence               158889999999999999999999 9999999998754

>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3

Probab=98.80  E-value=1.5e-08  Score=82.60  Aligned_cols=85  Identities=9%  Similarity=0.191  Sum_probs=74.2

Q ss_pred             CCCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEE
Q 016705            9 KPDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSL   88 (384)
Q Consensus         9 ~~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~   88 (384)
                      ...|++|++++++.+.|++  .+||+++++++|+++++.|.|++...      .+                         
T Consensus         7 ~~~~~~~W~Qt~~~V~v~i--~l~~v~~~~v~v~~~~~~l~v~~~~~------~~-------------------------   53 (114)
T 1rl1_A            7 QSKIKYDWYQTESQVVITL--MIKNVQKNDVNVEFSEKELSALVKLP------SG-------------------------   53 (114)
T ss_dssp             -CCCCEEEEECSSEEEEEE--CCCSCCGGGEEEECSSSCEEEEEECT------TS-------------------------
T ss_pred             CCCCCccEEeCCCEEEEEE--EeCCCCHHHCEEEEEcCEEEEEEEeC------CC-------------------------
Confidence            4678899999999999888  99999999999999999999998531      11                         


Q ss_pred             eecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCCC
Q 016705           89 NRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFD  132 (384)
Q Consensus        89 rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe~  132 (384)
                           ..|.+.+.|+..|++++.++++.+ |.|+|+|+|..+..
T Consensus        54 -----~~y~~~~~L~~~I~~e~s~~~~~~-~~l~i~L~K~~~~~   91 (114)
T 1rl1_A           54 -----EDYNLKLELLHPIIPEQSTFKVLS-TKIEIKLKKPEAVR   91 (114)
T ss_dssp             -----SEEEEEECBSSCCCGGGEEEEECS-SSEEEEEECSSCCC
T ss_pred             -----cEEEEEeeCCCcCCccccEEEEEC-CEEEEEEEcCCCCc
Confidence                 168899999999999999999999 99999999987643

>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A

Probab=98.77  E-value=2.4e-08  Score=89.18  Aligned_cols=78  Identities=22%  Similarity=0.297  Sum_probs=63.0

Q ss_pred             CceEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeec-cccceEeeCCCccCcceeeEEEecceeEEE
Q 016705          148 KGFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYH-GNNFRSFLFPDGVDPFGFSTSMDDAGVLTL  226 (384)
Q Consensus       148 ~g~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h-~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~  226 (384)
                      +..+.|++.| ||+++|||.|.++.|.+.|+|.+..+ +++    .+|| .+|.|+|.+|+.||+=.++|++..||||++
T Consensus        72 ~d~~~v~~dl-PG~~~edI~V~v~~~~L~I~g~~~~~-~~~----~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~I  145 (175)
T 2klr_A           72 KDRFSVNLDV-KHFSPEELKVKVLGDVIEVHGKHEER-QDE----HGFISREFHRKYRIPADVDPLTITSSLSSDGVLTV  145 (175)
T ss_dssp             CSEEEEEECC-SSCCGGGEEEEEETTEEEEEEEEEEE-EET----TEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEEE
T ss_pred             CCeEEEEEEC-CCCChHHEEEEEECCEEEEEEEEccc-ccC----CceEEEEEEEEEECCCCcChhHeEEEEcCCCEEEE
Confidence            3446666766 79999999999999999999986443 222    2243 466699999999999999999989999999


Q ss_pred             Eehhh
Q 016705          227 TFKRL  231 (384)
Q Consensus       227 ~~~~~  231 (384)
                      ++.+.
T Consensus       146 ~lPK~  150 (175)
T 2klr_A          146 NGPRK  150 (175)
T ss_dssp             EEECC
T ss_pred             EEECC
Confidence            98764

>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A

Probab=98.73  E-value=3e-08  Score=86.02  Aligned_cols=80  Identities=16%  Similarity=0.213  Sum_probs=61.7

Q ss_pred             ceEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcc----ee-eeccccceEeeCCCccCcceeeEEEeccee
Q 016705          149 GFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTS----VK-QYHGNNFRSFLFPDGVDPFGFSTSMDDAGV  223 (384)
Q Consensus       149 g~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~----~k-~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~  223 (384)
                      ..+.|++.| ||++.|||.|.++.|.+.|+|.+.......+..    .+ .| +.|.|+|.+|+.||+=.++|++. |||
T Consensus        66 ~~~~v~~dl-PG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~-g~f~R~~~LP~~vd~~~i~A~~~-nGv  142 (161)
T 4eld_A           66 QHIKVIAWL-PGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEE-EEIYRTIKLPATVKEENASAKFE-NGV  142 (161)
T ss_dssp             SEEEEEEEC-TTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCC-CEEEEEEECSSCBCGGGCEEEEE-TTE
T ss_pred             CEEEEEEEC-CCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeecc-ccEEEEEECCCCcccccEEEEEE-CCE
Confidence            357777777 999999999999999999999744321111111    11 12 56779999999999999999995 899


Q ss_pred             EEEEehhh
Q 016705          224 LTLTFKRL  231 (384)
Q Consensus       224 ~~~~~~~~  231 (384)
                      |++++.+.
T Consensus       143 L~I~lpK~  150 (161)
T 4eld_A          143 LSVILPKA  150 (161)
T ss_dssp             EEEEEEBC
T ss_pred             EEEEEEcC
Confidence            99998764

>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A

Probab=98.60  E-value=1.4e-07  Score=78.44  Aligned_cols=75  Identities=19%  Similarity=0.133  Sum_probs=59.8

Q ss_pred             ceEEEEEeecccCCccceEEEEeC-CeEEEEeeeeeeeccCCcceeeecc-----ccceEeeCCCccCccee-eEEEecc
Q 016705          149 GFVDFKAYLAAGTKIEDLVVVIER-GKYLIVGMLQKKEQEGDTSVKQYHG-----NNFRSFLFPDGVDPFGF-STSMDDA  221 (384)
Q Consensus       149 g~~~~~~~~~~~~k~edl~v~v~~-~~~~v~g~~~k~~~~~~~~~k~~h~-----~~~~sy~~p~~vdp~~~-~~~~~d~  221 (384)
                      ..+.+++.| ||+++|||.|.++. |.+.|+|.+.. +.     ..+||.     .|.|+|.+|+.||+=.+ +|++. |
T Consensus        34 ~~~~v~~~l-PG~~~edi~V~v~~~~~L~I~g~~~~-~~-----~~~~~~~Er~~~f~R~~~LP~~vd~~~i~~A~~~-~  105 (123)
T 3aab_A           34 GYLVVVADL-AGFNKEKIKARVSGQNELIIEAEREI-TE-----PGVKYLTQRPKYVRKVIRLPYNVAKDAEISGKYE-N  105 (123)
T ss_dssp             TEEEEEEEC-CSCCGGGCEEEEETTTEEEEEEECCC-CC-----CSCEEEECSCSEEEEEEECSSEECTTCCCEEEEE-T
T ss_pred             CEEEEEEEC-CCCCHHHEEEEEeCCCEEEEEEEEec-cC-----CCeEEEEEEeEEEEEEEECCCCcCcchhCeeEEc-C
Confidence            346666666 79999999999999 99999997433 21     122333     67799999999999999 99995 8


Q ss_pred             eeEEEEehhh
Q 016705          222 GVLTLTFKRL  231 (384)
Q Consensus       222 ~~~~~~~~~~  231 (384)
                      |||++++.+.
T Consensus       106 GvL~I~lPK~  115 (123)
T 3aab_A          106 GVLTIRIPIA  115 (123)
T ss_dssp             TEEEEEEEGG
T ss_pred             CEEEEEEEcC
Confidence            9999998764

>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A

Probab=98.60  E-value=1.5e-07  Score=81.36  Aligned_cols=80  Identities=24%  Similarity=0.374  Sum_probs=61.9

Q ss_pred             ceEEEEEeecccCCccceEEEE-eCCeEEEEeeeeeeeccCCcceeeec------cccceEeeCCCccCcceeeEEEecc
Q 016705          149 GFVDFKAYLAAGTKIEDLVVVI-ERGKYLIVGMLQKKEQEGDTSVKQYH------GNNFRSFLFPDGVDPFGFSTSMDDA  221 (384)
Q Consensus       149 g~~~~~~~~~~~~k~edl~v~v-~~~~~~v~g~~~k~~~~~~~~~k~~h------~~~~~sy~~p~~vdp~~~~~~~~d~  221 (384)
                      ..+.|++.| ||++.|||.|.+ +.|.+.|+|.......+.+   ..||      +.|.|+|.+|+.||+=.++|++ .|
T Consensus        53 d~~~v~~dl-PGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~---~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~-~n  127 (151)
T 1gme_A           53 EAHVFKADL-PGVKKEEVKVEVEDGNVLVVSGERTKEKEDKN---DKWHRVERSSGKFVRRFRLLEDAKVEEVKAGL-EN  127 (151)
T ss_dssp             SEEEEEEEC-TTCCGGGEEEEEETTTEEEEEECCCCCCCCTT---CEEEECCCCCCCEEEEEECSSCCCGGGCEEEE-ET
T ss_pred             CEEEEEEEC-CCCChHHEEEEEecCCEEEEEEEEccccccCC---ceEEEEeEeccEEEEEEECCCCccccceEEEE-EC
Confidence            346666666 799999999999 5789999997444322211   2243      6788999999999999999999 68


Q ss_pred             eeEEEEehhhcc
Q 016705          222 GVLTLTFKRLMP  233 (384)
Q Consensus       222 ~~~~~~~~~~~~  233 (384)
                      |||++++.+.-+
T Consensus       128 GvL~I~lPK~~~  139 (151)
T 1gme_A          128 GVLTVTVPKAEV  139 (151)
T ss_dssp             TEEEEEEECCCC
T ss_pred             CEEEEEEEccCc
Confidence            999999977543

>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}

Probab=97.63  E-value=0.00061  Score=58.33  Aligned_cols=84  Identities=14%  Similarity=0.242  Sum_probs=70.2

Q ss_pred             cCCCCCCeeeEEEeCCeEEEEEeccCCCCC--CCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhcccccccc
Q 016705            6 DRKKPDPVSAIWEEDERSVHFKVFLASGMK--QEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEAR   83 (384)
Q Consensus         6 dR~~~~P~VDV~ETDDeyII~A~FDLPGVk--KEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEar   83 (384)
                      |.+-.+|.+.+.++++..+|.+  .+|-++  ..++++.|+++.......                              
T Consensus        12 ~~~~iTP~F~itQDdefv~I~I--~~p~ir~~a~~~ei~vd~~~F~F~~~------------------------------   59 (115)
T 3eud_A           12 DDKMITPRFSITQDEEFIFLKI--FISNIRFSAVGLEIIIQENMIIFHLS------------------------------   59 (115)
T ss_dssp             --CCBCCCEEEEECSSEEEEEE--ECCSCCCCSSSCEEEEETTEEEEEET------------------------------
T ss_pred             CCCEeCCcEEEEECCCEEEEEE--EcCceecccCccEEEEeCCEEEEecC------------------------------
Confidence            3446789999999999999888  999877  789999999998887641                              


Q ss_pred             CceEEeecccceEEEEEECCCCc-ccCcceEEee-cCcEEEEEEeecCCCC
Q 016705           84 DTSSLNRPNDGKIEMNFSLPVGV-DPDGFSTSMD-DAGVLTLTFKRQRAFD  132 (384)
Q Consensus        84 d~~~~rERs~GsFsRsI~LPe~V-D~dkIkAsLe-NdGVLTITLPK~epe~  132 (384)
                                 .|.-++.||..+ |.++-+|+|+ ++|.++|++||..+-+
T Consensus        60 -----------PYyLRL~lP~~vved~~~~A~YD~d~g~~~v~lpK~~~GE   99 (115)
T 3eud_A           60 -----------PYYLRLRFPHELIDDERSTAQYDSKDECINVKVAKLNKNE   99 (115)
T ss_dssp             -----------TEEEEEECSSCEECSTTCEEEEETTTTEEEEEEEESSTTC
T ss_pred             -----------CeEEEEecCcceecCCCcceEEeCCCcEEEEEEcCCcCCC
Confidence                       377789999997 7788899998 3499999999998754

>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}

Probab=97.57  E-value=0.0001  Score=64.44  Aligned_cols=79  Identities=13%  Similarity=0.220  Sum_probs=68.4

Q ss_pred             CCCeeeEEEeCCeEEEEEeccCCCCC--CCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceE
Q 016705           10 PDPVSAIWEEDERSVHFKVFLASGMK--QEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSS   87 (384)
Q Consensus        10 ~~P~VDV~ETDDeyII~A~FDLPGVk--KEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~   87 (384)
                      .+|++.+.++++..+|.+  .+|.++  ..+++|.|++..+.....                                  
T Consensus         2 iTP~F~itQd~e~viV~I--k~P~~~~~~sdiei~v~~~~F~F~~~----------------------------------   45 (134)
T 2k8q_A            2 ITPRFSITQDEEFIFLKI--FISNIRFSAVGLEIIIQENMIIFHLS----------------------------------   45 (134)
T ss_dssp             CCSEEEEEECSSEEEEEE--ECCSSCCCSSSCCCEECSSSEEECSS----------------------------------
T ss_pred             cCceEEEEECCCEEEEEE--EcCccccCccccEEEEeCCEEEEecC----------------------------------
Confidence            479999999999999999  999999  899999999888877421                                  


Q ss_pred             EeecccceEEEEEECCCCc-ccCcceEEee-cCcEEEEEEeecCCC
Q 016705           88 LNRPNDGKIEMNFSLPVGV-DPDGFSTSMD-DAGVLTLTFKRQRAF  131 (384)
Q Consensus        88 ~rERs~GsFsRsI~LPe~V-D~dkIkAsLe-NdGVLTITLPK~epe  131 (384)
                             .|.-++.||..| |.+..+|+|. +.|.|+|++||..+-
T Consensus        46 -------PYyLRL~LP~~V~e~~~~kA~YD~d~~~~~VtLpK~~~G   84 (134)
T 2k8q_A           46 -------PYYLRLRFPHELIDDERSTAQYDSKDECINVKVAKLNKN   84 (134)
T ss_dssp             -------SSCEEECCSSCEECCSSCEEEEETTTTEEEEEEEESSTT
T ss_pred             -------CeEEEecCCCeeecCCCcceeEeccCCEEEEEEeCCCCC
Confidence                   356679999998 9999999998 349999999999875

>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.25  E-value=0.0029  Score=52.86  Aligned_cols=82  Identities=10%  Similarity=0.120  Sum_probs=69.2

Q ss_pred             CCeeeEEEeCCeEEEEEeccCCCC---CCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceE
Q 016705           11 DPVSAIWEEDERSVHFKVFLASGM---KQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSS   87 (384)
Q Consensus        11 ~P~VDV~ETDDeyII~A~FDLPGV---kKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~   87 (384)
                      .++++++++.+...|.+  .+||+   .++++.|+++++.|.|+....      .+                        
T Consensus        20 ~~~y~W~Qt~~~V~i~I--~l~~~~~~~~~~v~V~~~~~~l~v~~~~~------~~------------------------   67 (127)
T 1x5m_A           20 ISNYGWDQSDKFVKIYI--TLTGVHQVPTENVQVHFTERSFDLLVKNL------NG------------------------   67 (127)
T ss_dssp             CCSCEEEEETTEEEEEE--ECTTTTTSCTTSEEEEECSSEEEEEECSC------SS------------------------
T ss_pred             ccEEEEEcCCCEEEEEE--EeCCCCcCCccccEEEEEcCEEEEEEEcC------CC------------------------
Confidence            56899999999999888  99999   899999999999999986310      00                        


Q ss_pred             EeecccceEEEEEE-CCCCcccCcceEEeecCcEEEEEEeecCCC
Q 016705           88 LNRPNDGKIEMNFS-LPVGVDPDGFSTSMDDAGVLTLTFKRQRAF  131 (384)
Q Consensus        88 ~rERs~GsFsRsI~-LPe~VD~dkIkAsLeNdGVLTITLPK~epe  131 (384)
                            ..|.-.+. |-..|++++-+.++.. +-+.|+|-|..+.
T Consensus        68 ------~~y~~~~~~L~~~I~~e~S~~~v~~-~kVei~L~K~~~~  105 (127)
T 1x5m_A           68 ------KSYSMIVNNLLKPISVEGSSKKVKT-DTVLILCRKKVEN  105 (127)
T ss_dssp             ------SCEEEEEECBSSCCCTTTCEEEEET-TEEEEEEECSSSS
T ss_pred             ------CcEEEEhHHhcCccCcccCEEEEeC-CEEEEEEEECCCC
Confidence                  04777785 9999999999999999 9999999998764

>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3

Probab=97.16  E-value=0.002  Score=55.32  Aligned_cols=94  Identities=9%  Similarity=0.253  Sum_probs=72.2

Q ss_pred             CCeeeEEEe-CCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEe
Q 016705           11 DPVSAIWEE-DERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLN   89 (384)
Q Consensus        11 ~P~VDV~ET-DDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~r   89 (384)
                      .|++|++++ .+...|++  .++++.+++++|++.++.|.|+..-....                .+..           
T Consensus        19 ~~r~~W~Qt~~~~V~vtI--~~k~v~~~~v~V~f~~~~l~v~~~~~~~~----------------~l~~-----------   69 (134)
T 1wh0_A           19 FVKNDSYEKGPDSVVVHV--YVKEICRDTSRVLFREQDFTLIFQTRDGN----------------FLRL-----------   69 (134)
T ss_dssp             CCCEEEEEETTTEEEEEE--ECCSBCTTSCEEEECSSEEEEEECBCCHH----------------HHHH-----------
T ss_pred             CCCeEEEcCCCCEEEEEE--EeCCCCcccCEEEEECCEEEEEEEcCCCc----------------cccc-----------
Confidence            588999999 99988877  99999999999999999999986431100                0000           


Q ss_pred             ecccc---eEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCCCcc
Q 016705           90 RPNDG---KIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDLR  134 (384)
Q Consensus        90 ERs~G---sFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe~~R  134 (384)
                      -...|   .|.-.+.|-..|++++-+.++.. .-+.|+|.|.......
T Consensus        70 ~~a~g~~~~y~~~~~L~~~I~pe~S~~~v~~-~kIeI~L~K~e~~~W~  116 (134)
T 1wh0_A           70 HPGCGPHTTFRWQVKLRNLIEPEQCTFCFTA-SRIDICLRKRQSQRWG  116 (134)
T ss_dssp             STTCCTTSCEEEEEEBSSCEEEEEEEEEECS-SEEEEEEEESSSCCCS
T ss_pred             ccccCcceeEEEeccccccCCchhCEEEEeC-CEEEEEEEECCCCccc
Confidence            00001   57778899999999999999999 9999999998765443

>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2

Probab=96.94  E-value=0.0034  Score=52.43  Aligned_cols=80  Identities=14%  Similarity=0.143  Sum_probs=67.3

Q ss_pred             CC-eeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEe
Q 016705           11 DP-VSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLN   89 (384)
Q Consensus        11 ~P-~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~r   89 (384)
                      .| .++++++.+...|++  .+|+.  ++++|+++.+.|.+++...     ..+                          
T Consensus         2 ~P~~~~W~Qt~~~V~ltI--~~~~~--~~~~V~~~~~~l~~~~~~~-----~~~--------------------------   46 (125)
T 1ejf_A            2 QPASAKWYDRRDYVFIEF--CVEDS--KDVNVNFEKSKLTFSCLGG-----SDN--------------------------   46 (125)
T ss_dssp             BCCCEEEEECSSEEEEEE--CCTTE--EEEEEEEETTEEEEEEEET-----TTT--------------------------
T ss_pred             CCCceeEEeCCCEEEEEE--EecCC--CceEEEEECCEEEEEEEeC-----CCC--------------------------
Confidence            46 899999999998888  99996  6999999999999987531     011                          


Q ss_pred             ecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCC
Q 016705           90 RPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRA  130 (384)
Q Consensus        90 ERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~ep  130 (384)
                          ..|.-.+.|-..|++++.+.++.+ .-+.|+|.|..+
T Consensus        47 ----~~y~~~l~L~~~I~~e~S~~~v~~-~kiei~L~K~~~   82 (125)
T 1ejf_A           47 ----FKHLNEIDLFHCIDPNDSKHKRTD-RSILCCLRKGES   82 (125)
T ss_dssp             ----EEEEEEEEBSSCEEEEEEEEEECS-SCEEEEEEESST
T ss_pred             ----ceEEEEEEccceeccccCEEEECC-CEEEEEEEECCC
Confidence                047888899999999999999998 899999999875

>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4

Probab=96.68  E-value=0.01  Score=49.41  Aligned_cols=87  Identities=7%  Similarity=0.059  Sum_probs=69.0

Q ss_pred             CCCeeeEEEeCCeEEEEEeccCC-CC-CCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceE
Q 016705           10 PDPVSAIWEEDERSVHFKVFLAS-GM-KQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSS   87 (384)
Q Consensus        10 ~~P~VDV~ETDDeyII~A~FDLP-GV-kKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~   87 (384)
                      ..|.+.++++.++..|++  .|| |+ +++||+|++..+.|.|.....      .+                        
T Consensus        18 ~~~~y~W~Qt~~~V~i~I--~lp~~~~~~kdv~V~i~~~~l~v~~~~~------~~------------------------   65 (124)
T 1wgv_A           18 VRENYTWSQDYTDLEVRV--PVPKHVVKGKQVSVALSSSSIRVAMLEE------NG------------------------   65 (124)
T ss_dssp             CCSSCEEEEETTEEEEEE--ECCTTCCSGGGEEEEECSSEEEEEEECS------SS------------------------
T ss_pred             cCCcEEEEEcccEEEEEE--EcCCCCCchhheEEEEEcCEEEEEEEcc------CC------------------------
Confidence            468899999999999887  999 88 899999999999999986420      01                        


Q ss_pred             EeecccceEEEEEECCCCcccCcceEEeecCc-EEEEEEeecCCCCcce
Q 016705           88 LNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAG-VLTLTFKRQRAFDLRN  135 (384)
Q Consensus        88 ~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdG-VLTITLPK~epe~~Rr  135 (384)
                       .     .+.-...|...|+++.-+-++++ + .|.|+|-|.......+
T Consensus        66 -~-----~~~~~~~L~~~I~~e~S~w~i~~-~k~v~i~L~K~~~~~W~~  107 (124)
T 1wgv_A           66 -E-----RVLMEGKLTHKINTESSLWSLEP-GKCVLVNLSKVGEYWWNA  107 (124)
T ss_dssp             -E-----EEEEEEEBSSCBCTTTCEEEECT-TSEEEEEECBSSSCCCSC
T ss_pred             -C-----ceEEcccccCcCCCcCCEEEEeC-CCEEEEEEEECCCCCCcC
Confidence             0     23345789999999999999998 7 5999999986543333

>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}

Probab=96.59  E-value=0.0044  Score=60.71  Aligned_cols=62  Identities=15%  Similarity=0.227  Sum_probs=53.3

Q ss_pred             eEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccceEEEEEE
Q 016705           22 RSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGKIEMNFS  101 (384)
Q Consensus        22 eyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~GsFsRsI~  101 (384)
                      .|.+++  .|||++|++|++.-.++.|+|+.                                         |.|+|.|.
T Consensus       306 ~~~~~l--~lP~~~~~~~~l~~~gdeL~v~~-----------------------------------------g~~rR~i~  342 (374)
T 3igf_A          306 NRQVRL--FLPGFDKKQVKLTQYGPEVTVEA-----------------------------------------GDQRRNIF  342 (374)
T ss_dssp             TTEEEE--ECTTCCGGGCEEEEETTEEEEEE-----------------------------------------TTEEEEEE
T ss_pred             cEEEEE--ECCCCCHHHeEEEEECCeEEEEE-----------------------------------------CCEeeccc
Confidence            788888  99999999999999999999975                                         36999999


Q ss_pred             CCCCcccC-cceEEeecCcEEEEEEee
Q 016705          102 LPVGVDPD-GFSTSMDDAGVLTLTFKR  127 (384)
Q Consensus       102 LPe~VD~d-kIkAsLeNdGVLTITLPK  127 (384)
                      ||....-- -..|.|+| |.|+|++-.
T Consensus       343 LP~~L~~~~v~~A~~~~-~~L~i~~~~  368 (374)
T 3igf_A          343 LPPALSGRPITGAKFQN-NYLIISFLE  368 (374)
T ss_dssp             CCTTTTTCCEEEEEEET-TEEEEEECC
T ss_pred             CCHHHcCCCccccEEEC-CEEEEEEeh
Confidence            99875433 45799999 999999754

>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4

Probab=96.28  E-value=0.029  Score=46.93  Aligned_cols=79  Identities=19%  Similarity=0.116  Sum_probs=64.6

Q ss_pred             CCCeeeEEEeCCeEEEEEeccCC-C--CCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCce
Q 016705           10 PDPVSAIWEEDERSVHFKVFLAS-G--MKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTS   86 (384)
Q Consensus        10 ~~P~VDV~ETDDeyII~A~FDLP-G--VkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~   86 (384)
                      ..|.+.++++.++..|++  .|| |  +++.|++|++..+.|.|...      ...                        
T Consensus         6 ~~~~y~W~Qt~~~V~i~I--~lp~~~~~~~kdv~V~i~~~~l~v~~k------g~~------------------------   53 (131)
T 1wfi_A            6 SGPNYRWTQTLAELDLAV--PFRVSFRLKGKDVVVDIQRRHLRVGLK------GQP------------------------   53 (131)
T ss_dssp             SCCSSEEEECSSEEEEEE--CCCCSSCCCTTSEEEEEETTEEEEEET------TSC------------------------
T ss_pred             CCCcEEEEecCCEEEEEE--ECCCCCcccccceEEEEeCCEEEEEEC------Cce------------------------
Confidence            568899999999998877  999 7  89999999999999999752      000                        


Q ss_pred             EEeecccceEEEEEECCCCcccCcceEEeecCc-EEEEEEeecCC
Q 016705           87 SLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAG-VLTLTFKRQRA  130 (384)
Q Consensus        87 ~~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdG-VLTITLPK~ep  130 (384)
                               +.-...|...|+++.-+-++++ | .|.|+|-|..+
T Consensus        54 ---------~~~~~~L~~~I~~e~s~w~i~~-~k~v~i~L~K~~~   88 (131)
T 1wfi_A           54 ---------PVVDGELYNEVKVEESSWLIED-GKVVTVHLEKINK   88 (131)
T ss_dssp             ---------CSBCSCBSSCBCSTTCEEEEET-TTEEEEEEEBSSS
T ss_pred             ---------EEEecccccccccccCEEEEcC-CCEEEEEEEECCC
Confidence                     0012357789999999999999 8 89999999876

>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}

Probab=96.15  E-value=0.03  Score=47.00  Aligned_cols=77  Identities=12%  Similarity=0.090  Sum_probs=62.2

Q ss_pred             CCCeeeEEEeCCeEEEEEeccCC-CCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEE
Q 016705           10 PDPVSAIWEEDERSVHFKVFLAS-GMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSL   88 (384)
Q Consensus        10 ~~P~VDV~ETDDeyII~A~FDLP-GVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~   88 (384)
                      ..|.++++++.+...|++  .|| |++++|++|.+..+.|.|...         +                         
T Consensus         3 ~~~~y~W~Qt~~~V~i~I--~lp~~~~~kdv~V~i~~~~l~v~~~---------g-------------------------   46 (131)
T 2o30_A            3 SEAKYTWDQELNEINIQF--PVTGDADSSAIKIRMVGKKICVKNQ---------G-------------------------   46 (131)
T ss_dssp             --CCCEEEEETTEEEEEE--ECC---CCSCEEEEEETTEEEEEET---------T-------------------------
T ss_pred             CCCcEEEEecCCEEEEEE--ECCCCCCccceEEEEECCEEEEEEC---------C-------------------------
Confidence            468899999999999887  996 999999999999999999751         1                         


Q ss_pred             eecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecC
Q 016705           89 NRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQR  129 (384)
Q Consensus        89 rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~e  129 (384)
                      .     . .-...|...|+++.-+-++.+ +-|.|+|-|..
T Consensus        47 ~-----~-~~~~~L~~~I~~e~S~w~i~~-~kv~i~L~K~~   80 (131)
T 2o30_A           47 E-----I-VIDGELLHEVDVSSLWWVING-DVVDVNVTKKR   80 (131)
T ss_dssp             E-----E-EEEEEBSSCEEEEEEEEEEET-TEEEEEEEESS
T ss_pred             E-----e-eEccccccccccccCEEEEeC-CEEEEEEEECC
Confidence            0     1 234578899999999999999 88999999983

>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A

Probab=95.97  E-value=0.047  Score=45.45  Aligned_cols=79  Identities=18%  Similarity=0.093  Sum_probs=64.7

Q ss_pred             CCCeeeEEEeCCeEEEEEeccCC-C--CCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCce
Q 016705           10 PDPVSAIWEEDERSVHFKVFLAS-G--MKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTS   86 (384)
Q Consensus        10 ~~P~VDV~ETDDeyII~A~FDLP-G--VkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~   86 (384)
                      ..|.+.++++.++..|++  .|| |  ++..||.|++..+.|.|..+-      .+                        
T Consensus        15 ~~~~y~W~Qt~~eV~v~V--~lp~~~~~~~kdv~V~i~~~~l~v~~kg------~~------------------------   62 (121)
T 3qor_A           15 DLPNYRWTQTLSELDLAV--PFCVNFRLKGKDMVVDIQRRHLRVGLKG------QP------------------------   62 (121)
T ss_dssp             BCSSCEEEECSSEEEEEE--ECCCSSCCCGGGEEEEEETTEEEEEETT------SC------------------------
T ss_pred             cCCCEEEEEccceEEEEE--ECCCCCcccccceEEEEEcCEEEEEEcC------cc------------------------
Confidence            468899999999998877  999 4  789999999999999886420      00                        


Q ss_pred             EEeecccceEEEEEECCCCcccCcceEEeecCc-EEEEEEeecCC
Q 016705           87 SLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAG-VLTLTFKRQRA  130 (384)
Q Consensus        87 ~~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdG-VLTITLPK~ep  130 (384)
                               +.-...|...|+++...-++++ | .|.|+|-|...
T Consensus        63 ---------~~~~g~L~~~I~~deS~w~i~~-~~~i~i~L~K~~~   97 (121)
T 3qor_A           63 ---------AIIDGELYNEVKVEESSWLIAD-GAVVTVHLEKINK   97 (121)
T ss_dssp             ---------CSEEEEBSSCBCGGGCEEEEET-TTEEEEEEEBSSS
T ss_pred             ---------eEEeccccccccccccEEEEcC-CCEEEEEEEECCC
Confidence                     1124578899999999999999 8 99999999865

>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}

Probab=95.93  E-value=0.014  Score=50.76  Aligned_cols=82  Identities=6%  Similarity=0.117  Sum_probs=67.0

Q ss_pred             CCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEE-CCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEE
Q 016705           10 PDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQ-DGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSL   88 (384)
Q Consensus        10 ~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVd-ddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~   88 (384)
                      ..|+++++++.+.+.|++  .+|++  ++++|+++ .+.|.+++.   . .  .+                         
T Consensus         3 ~~P~~~W~Qt~~~V~ltI--~l~~~--~~v~V~~~~~~~l~~~~~---~-~--~~-------------------------   47 (150)
T 2kmw_A            3 RNPEVLWAQRSDKVYLTV--ALPDA--KDISVKCEPQGLFSFSAL---G-A--QG-------------------------   47 (150)
T ss_dssp             ECCCEEEEECSSEEEEEE--CCSSE--EEEEECCCTTEEEEEEEE---T-T--TT-------------------------
T ss_pred             cCCcEEEEeCCCEEEEEE--EeCCC--CceEEEEecCCEEEEEEE---c-C--CC-------------------------
Confidence            368999999999988877  99998  47999999 789999985   1 1  11                         


Q ss_pred             eecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCCCc
Q 016705           89 NRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDL  133 (384)
Q Consensus        89 rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe~~  133 (384)
                           ..|.-.+.|-..|+++ .+.+... .-+.|+|.|..+...
T Consensus        48 -----~~y~~~l~L~~~Idpe-S~~~v~~-~kIei~L~K~e~~~W   85 (150)
T 2kmw_A           48 -----ERFEFSLELYGKIMTE-YRKNVGL-RNIIFSIQKEERSWW   85 (150)
T ss_dssp             -----EEEEEEEEBSSCEEEE-EEEEEES-SSEEEEEEECCSSCC
T ss_pred             -----ceEEEEeEhhhccccc-ceEEecC-CEEEEEEEECCCCcC
Confidence                 1578888999999999 8899888 889999999875433

>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}

Probab=95.88  E-value=0.0033  Score=53.52  Aligned_cols=87  Identities=8%  Similarity=0.095  Sum_probs=59.6

Q ss_pred             CCCCeeeEEEeCCe-------EEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhcccccc
Q 016705            9 KPDPVSAIWEEDER-------SVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEE   81 (384)
Q Consensus         9 ~~~P~VDV~ETDDe-------yII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneE   81 (384)
                      ...|.++++++.+.       +.|++  .+|++.  +++|+++.+.|.+++.........+.                  
T Consensus         4 ~~~p~~~W~Q~~~~~~~~k~~V~ltI--~~~~~~--~~~V~~~~~~l~~~~~~~~~~g~~~~------------------   61 (134)
T 2cg9_X            4 VINPQVAWAQRSSTTDPERNYVLITV--SIADCD--APELTIKPSYIELKAQSKPHVGDENV------------------   61 (134)
T ss_dssp             -------CBCCCEEECCCSSEEEEEC--CCSSEE--SCCCCBCSSEEEECCEEC-------C------------------
T ss_pred             ccCCCEEEEeCCCCcCCcCCEEEEEE--EecCCC--ceEEEEECCEEEEEEecccccCCccC------------------
Confidence            45799999999876       66655  999984  89999999999998653110000000                  


Q ss_pred             ccCceEEeecccceEEEEEECCCCcccCcceEEeecCcE-EEEEEeecCC
Q 016705           82 ARDTSSLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGV-LTLTFKRQRA  130 (384)
Q Consensus        82 ard~~~~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGV-LTITLPK~ep  130 (384)
                                  ..|.-.+.|...|++++.+.++.+ +. +.|+|.|..+
T Consensus        62 ------------~~y~~~l~L~~~Idpe~S~~~v~~-~~~vei~L~K~~~   98 (134)
T 2cg9_X           62 ------------HHYQLHIDLYKEIIPEKTMHKVAN-GQHYFLKLYKKDL   98 (134)
T ss_dssp             ------------EEBCEEEECSSCCCSSSEEEEECC-C--CEEEEEECSS
T ss_pred             ------------ceEEEEEEChhhccccccEEEECC-CEEEEEEEEECCC
Confidence                        147778899999999999999999 88 9999999874

>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}

Probab=95.53  E-value=0.13  Score=44.84  Aligned_cols=85  Identities=9%  Similarity=0.112  Sum_probs=68.7

Q ss_pred             CCCeeeEEEeCCeEEEEEeccCC-CCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEE
Q 016705           10 PDPVSAIWEEDERSVHFKVFLAS-GMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSL   88 (384)
Q Consensus        10 ~~P~VDV~ETDDeyII~A~FDLP-GVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~   88 (384)
                      ..|.+.++++.++..|++  .|| |++..||.|.+..+.|.|+.+         +                         
T Consensus        12 ~~~~y~W~Qt~~eV~v~I--~lp~~~~~kdv~V~i~~~~L~v~~k---------g-------------------------   55 (157)
T 2rh0_A           12 GTPWGQWYQTLEEVFIEV--QVPPGTRAQDIQCGLQSRHVALAVG---------G-------------------------   55 (157)
T ss_dssp             ECSSEEEEECSSEEEEEE--ECCTTCCGGGEEEEECSSEEEEEET---------T-------------------------
T ss_pred             CCCcEEEEecCCEEEEEE--ECCCCCcccceEEEEecCEEEEEEC---------C-------------------------
Confidence            468899999999999887  998 899999999999999999752         1                         


Q ss_pred             eecccceEEEEEECCCCcccCcceEEeecCc-EEEEEEeecCC---CCcceEE
Q 016705           89 NRPNDGKIEMNFSLPVGVDPDGFSTSMDDAG-VLTLTFKRQRA---FDLRNVA  137 (384)
Q Consensus        89 rERs~GsFsRsI~LPe~VD~dkIkAsLeNdG-VLTITLPK~ep---e~~RrIa  137 (384)
                      .     . .-...|...|+++.-+-++++ + +|.|+|-|..+   ....++-
T Consensus        56 ~-----~-~l~g~L~~~I~~eeS~w~i~~-~k~v~I~L~K~~~~~~~~W~~L~  101 (157)
T 2rh0_A           56 R-----E-ILKGKLFDSTIADEGTWTLED-RKMVRIVLTKTKRDAANCWTSLL  101 (157)
T ss_dssp             E-----E-EEEEEBSSCBCGGGCEEEEEC-CCEEEEEEEBSSCSTTCCCSEEE
T ss_pred             E-----E-EEeeccccccCccccEEEEcC-CcEEEEEEEEcCCCcCCcChhhh
Confidence            0     1 134678999999999999998 6 59999999876   3444444

>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*

Probab=90.21  E-value=1.2  Score=34.05  Aligned_cols=69  Identities=7%  Similarity=0.037  Sum_probs=52.1

Q ss_pred             ceEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEe
Q 016705          149 GFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTF  228 (384)
Q Consensus       149 g~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~  228 (384)
                      ..+.|.+++ |+.+.+|+.|.++.+.+.|++..        ...+.|    .....++..|||=.-+..+.+ +.+.+++
T Consensus        12 ~~V~v~i~~-~~v~~~~v~v~~~~~~l~v~~~~--------~~~~~y----~~~~~L~~~I~~~~s~~~~~~-~~l~i~L   77 (92)
T 2xcm_C           12 EEVVVTVFA-KGIPKQNVNIDFGEQILSVVIEV--------PGEDAY----YLQPRLFGKIIPDKCKYEVLS-TKIEICL   77 (92)
T ss_dssp             TEEEEEEEC-CSCCGGGEEEEECSSBEEEEECC--------TTSCCE----EECCBBSSCBCGGGCEEEECS-SCEEEEE
T ss_pred             CEEEEEEEE-CCCChHHeEEEEECCEEEEEEEc--------CCCcEE----EEeeEcCCccCchhEEEEEEC-CEEEEEE
Confidence            357788886 68889999999999999999852        111223    356789999999888888876 5577877


Q ss_pred             hhh
Q 016705          229 KRL  231 (384)
Q Consensus       229 ~~~  231 (384)
                      +..
T Consensus        78 ~K~   80 (92)
T 2xcm_C           78 AKA   80 (92)
T ss_dssp             EBS
T ss_pred             EcC
Confidence            653

>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3

Probab=87.06  E-value=2.1  Score=34.26  Aligned_cols=69  Identities=10%  Similarity=0.027  Sum_probs=52.7

Q ss_pred             ceEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeeccccceEeeCCCccCcceeeEEEecceeEEEEe
Q 016705          149 GFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDGVDPFGFSTSMDDAGVLTLTF  228 (384)
Q Consensus       149 g~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~vdp~~~~~~~~d~~~~~~~~  228 (384)
                      ..|.|.+++. +.+.+|+.|.++.+.+.|++...        ..+    ++...+.++..|||=.-++.+.+ +.+.+++
T Consensus        19 ~~V~v~i~l~-~v~~~~v~v~~~~~~l~v~~~~~--------~~~----~y~~~~~L~~~I~~e~s~~~~~~-~~l~i~L   84 (114)
T 1rl1_A           19 SQVVITLMIK-NVQKNDVNVEFSEKELSALVKLP--------SGE----DYNLKLELLHPIIPEQSTFKVLS-TKIEIKL   84 (114)
T ss_dssp             SEEEEEECCC-SCCGGGEEEECSSSCEEEEEECT--------TSS----EEEEEECBSSCCCGGGEEEEECS-SSEEEEE
T ss_pred             CEEEEEEEeC-CCCHHHCEEEEEcCEEEEEEEeC--------CCc----EEEEEeeCCCcCCccccEEEEEC-CEEEEEE
Confidence            3588888885 88899999999999999998521        111    23467899999999888888877 5678887


Q ss_pred             hhh
Q 016705          229 KRL  231 (384)
Q Consensus       229 ~~~  231 (384)
                      +..
T Consensus        85 ~K~   87 (114)
T 1rl1_A           85 KKP   87 (114)
T ss_dssp             ECS
T ss_pred             EcC
Confidence            653

>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*

Probab=84.17  E-value=2.8  Score=38.87  Aligned_cols=114  Identities=16%  Similarity=0.218  Sum_probs=68.9

Q ss_pred             CCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeecccceEEEEEECCCCcccCcceEEe
Q 016705           36 QEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRPNDGKIEMNFSLPVGVDPDGFSTSM  115 (384)
Q Consensus        36 KEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rERs~GsFsRsI~LPe~VD~dkIkAsL  115 (384)
                      |+.|+|+++++.++|+|.+                                       |+.+|.|  +..     |+...
T Consensus        39 P~gV~V~i~~~~VtVKGPk---------------------------------------G~L~~~~--~~~-----v~i~~   72 (212)
T 1nkw_E           39 PSGVTVNAQDGVFKVKGPK---------------------------------------GELTVPY--NTE-----LTVRQ   72 (212)
T ss_pred             CCCcEEEEeCCEEEEECCC---------------------------------------EEEEEEC--CCC-----eEEEE
Confidence            6888999999999999843                                       2444444  333     44556


Q ss_pred             ecCcEEEEEEeecCCCC----------------------cceEEeccccccCCCCce-EEEEEeecccCC-------ccc
Q 016705          116 DDAGVLTLTFKRQRAFD----------------------LRNVAMGWEHAKDSKKGF-VDFKAYLAAGTK-------IED  165 (384)
Q Consensus       116 eNdGVLTITLPK~epe~----------------------~RrIaIg~~~~~~~~~g~-~~~~~~~~~~~k-------~ed  165 (384)
                      ++ +.|+|+.+......                      .+...+--.|+++...|. |.+    .=||+       ||+
T Consensus        73 e~-~~i~v~~~~~~k~~ra~~Gt~rslI~NMI~GVt~Gf~kkLelvGvGYra~~~G~~L~L----~LG~SHpv~~~iP~G  147 (212)
T 1nkw_E           73 DG-DQLLVERPSDAQKHRALHGLTRTLVANAVKGVSDGYTINLELRGVGFRAKLTGKALEM----NIGYSHPVIIEPPAG  147 (212)
T ss_pred             EC-CEEEEEcCCCCHHHHHHHHHHHHHhhCEEEeeccCeEEEEEEeeeeeEEEcCCCEEEE----EccCCccEEEECCCC
Confidence            77 88888766542210                      011111123445555665 443    22333       688


Q ss_pred             eEEEEeCC-eEEEEeeeeeeeccCCcceeeeccccceEeeCCCc
Q 016705          166 LVVVIERG-KYLIVGMLQKKEQEGDTSVKQYHGNNFRSFLFPDG  208 (384)
Q Consensus       166 l~v~v~~~-~~~v~g~~~k~~~~~~~~~k~~h~~~~~sy~~p~~  208 (384)
                      +.|.+.++ .++|+|. .|      ..+-|+ +-+-|+|.-||-
T Consensus       148 I~v~v~~~t~Iiv~Gi-DK------q~VGq~-AA~IR~~R~PEP  183 (212)
T 1nkw_E          148 VTFAVPEPTRIDVSGI-DK------QLVGQV-AANVRKVRKPDA  183 (212)
T ss_pred             eEEEeCCCCEEEEEeC-CH------HHHHHH-HHHHhccCCCCC
Confidence            99999876 9999996 22      233344 566788888873

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	384
d1shsa_	115	b.15.1.1 (A:) Small heat shock protein {Archaeon M	1e-05

>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 115

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

 Score = 41.9 bits (98), Expect = 1e-05
 Identities = 17/114 (14%), Positives = 37/114 (32%), Gaps = 22/114 (19%)

Query: 17  WEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFL 76
             E ++ +    +L  G+ +ED+ +      L I  + +                     
Sbjct: 15  IIEGDQHIKVIAWLP-GVNKEDIILNAVGDTLEIRAKRSPLM------------------ 55

Query: 77  KKNEEARDTSSLNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRA 130
               E+        P + +I     LP  V  +  S   ++ GVL++   +  +
Sbjct: 56  --ITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKFEN-GVLSVILPKAES 106

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	384
d1shsa_	115	Small heat shock protein {Archaeon Methanococcus j	99.9
d1gmea_	150	Small heat shock protein {Wheat (Triticum aestivum	99.89
d1shsa_	115	Small heat shock protein {Archaeon Methanococcus j	98.66
d1gmea_	150	Small heat shock protein {Wheat (Triticum aestivum	98.29
d1rl1a_	92	Suppressor of G2 allele of skp1 homolog, gst1 {Hum	97.91
d1wh0a_	134	Ubiquitin carboxyl-terminal hydrolase 19, USP19 {H	96.65
d1ejfa_	110	Co-chaperone p23 {Human (Homo sapiens) [TaxId: 960	96.09
d1wfia_	131	Nuclear migration protein nudC {Mouse (Mus musculu	95.57
d1wgva_	124	NudC domain containing protein 3, NUDCD3 (KIAA1068	94.44

>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=99.90  E-value=8.1e-24  Score=171.73  Aligned_cols=106  Identities=16%  Similarity=0.212  Sum_probs=92.7

Q ss_pred             CCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEe
Q 016705           10 PDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLN   89 (384)
Q Consensus        10 ~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~r   89 (384)
                      ..|++||+|++++|+|.+  +|||++++||+|+++++.|+|+|++......+..                    ..++..
T Consensus         9 ~~~pvdi~e~~~~~~i~~--~lPG~~~edi~v~v~~~~l~I~~~~~~~~~~~~~--------------------~~~~~~   66 (115)
T d1shsa_           9 GFMPISIIEGDQHIKVIA--WLPGVNKEDIILNAVGDTLEIRAKRSPLMITESE--------------------RIIYSE   66 (115)
T ss_dssp             SCCCEEEEECSSEEEEEE--ECTTCCGGGEEEEEETTEEEEEEECCCCCCCTTC--------------------EEEEEC
T ss_pred             CcCceEEEEcCCEEEEEE--ECCCCCHHHEEEEEECCEEEEEEEeccccccccc--------------------cEEEEe
Confidence            355699999999999998  9999999999999999999999988655432211                    135667


Q ss_pred             ecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCCCcceEEe
Q 016705           90 RPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDLRNVAM  138 (384)
Q Consensus        90 ERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe~~RrIaI  138 (384)
                      ++.+|.|+|+|+||.++|.++++|+|+| |+|+|++||.++..+|+|.|
T Consensus        67 ~~~~~~f~r~~~lP~~vd~~~i~A~~~n-GvL~I~lpK~~~~~~~~I~I  114 (115)
T d1shsa_          67 IPEEEEIYRTIKLPATVKEENASAKFEN-GVLSVILPKAESSIKKGINI  114 (115)
T ss_dssp             SCCCCEEEEEEECSSCBCGGGCEEEEET-TEEEEEEEBCGGGCCEECCC
T ss_pred             eecccceEEEEecCCceeecceEEEEEC-CEEEEEEEeCCCCCCceeee
Confidence            7889999999999999999999999999 99999999999988888876

>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum aestivum) [TaxId: 4565]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Wheat (Triticum aestivum) [TaxId: 4565]

Probab=99.89  E-value=2.8e-23  Score=176.66  Aligned_cols=107  Identities=22%  Similarity=0.254  Sum_probs=92.8

Q ss_pred             CCCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEEC-CEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEE
Q 016705           10 PDPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQD-GKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSL   88 (384)
Q Consensus        10 ~~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdd-dvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~   88 (384)
                      ..|++||+|++++|+|++  +|||++++||+|++++ +.|+|+|++..+.....                     ..++.
T Consensus        41 ~~p~~dv~e~~~~~~i~~--~lPG~~~edi~v~v~~~~~l~i~~~~~~~~~~~~---------------------~~~~~   97 (150)
T d1gmea_          41 ANARMDWKETPEAHVFKA--DLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKN---------------------DKWHR   97 (150)
T ss_dssp             GGGCEEEEECSSEEEEEE--ECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTT---------------------CEEEE
T ss_pred             CCCceeEEECCCEEEEEE--EeCCCccCCEEEEEEEccceeEEEEEeccccccc---------------------ceeee
Confidence            358999999999999999  9999999999999986 57899998765443222                     26899


Q ss_pred             eecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCCCcceEEecc
Q 016705           89 NRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDLRNVAMGW  140 (384)
Q Consensus        89 rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe~~RrIaIg~  140 (384)
                      +||.+|+|+|+|.||.+||.++|+|+|+| |||+|++||.++.+++.+.|.+
T Consensus        98 ~e~~~~~f~r~~~LP~~vd~~~i~A~~~n-GvL~I~lpK~~~~~~~~~~I~I  148 (150)
T d1gmea_          98 VERSSGKFVRRFRLLEDAKVEEVKAGLEN-GVLTVTVPKAEVKKPEVKAIQI  148 (150)
T ss_dssp             CCCCCCCEEEEEECSSCCCGGGCEEEEET-TEEEEEEECCCCCTTCCCCCCC
T ss_pred             eeeccceEEEEEECCCCeeeceeEEEEEC-CEEEEEEEcCCcCCCCceEEec
Confidence            99999999999999999999999999999 9999999999887776666543

>d1shsa_ b.15.1.1 (A:) Small heat shock protein {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.66  E-value=6.3e-08  Score=77.18  Aligned_cols=80  Identities=16%  Similarity=0.228  Sum_probs=61.3

Q ss_pred             CceEEEEEeecccCCccceEEEEeCCeEEEEeeeeeeeccCCcceeeec------cccceEeeCCCccCcceeeEEEecc
Q 016705          148 KGFVDFKAYLAAGTKIEDLVVVIERGKYLIVGMLQKKEQEGDTSVKQYH------GNNFRSFLFPDGVDPFGFSTSMDDA  221 (384)
Q Consensus       148 ~g~~~~~~~~~~~~k~edl~v~v~~~~~~v~g~~~k~~~~~~~~~k~~h------~~~~~sy~~p~~vdp~~~~~~~~d~  221 (384)
                      ...+.+.+.| ||++.|||.|.++.|.+.|+|...........  +.+|      +.|.|+|.+|+.||+=.++|++ +|
T Consensus        19 ~~~~~i~~~l-PG~~~edi~v~v~~~~l~I~~~~~~~~~~~~~--~~~~~~~~~~~~f~r~~~lP~~vd~~~i~A~~-~n   94 (115)
T d1shsa_          19 DQHIKVIAWL-PGVNKEDIILNAVGDTLEIRAKRSPLMITESE--RIIYSEIPEEEEIYRTIKLPATVKEENASAKF-EN   94 (115)
T ss_dssp             SSEEEEEEEC-TTCCGGGEEEEEETTEEEEEEECCCCCCCTTC--EEEEECSCCCCEEEEEEECSSCBCGGGCEEEE-ET
T ss_pred             CCEEEEEEEC-CCCCHHHEEEEEECCEEEEEEEeccccccccc--cEEEEeeecccceEEEEecCCceeecceEEEE-EC
Confidence            3446667777 89999999999999999999964332222111  1122      4567899999999999999999 57


Q ss_pred             eeEEEEehhh
Q 016705          222 GVLTLTFKRL  231 (384)
Q Consensus       222 ~~~~~~~~~~  231 (384)
                      |+|++++.+.
T Consensus        95 GvL~I~lpK~  104 (115)
T d1shsa_          95 GVLSVILPKA  104 (115)
T ss_dssp             TEEEEEEEBC
T ss_pred             CEEEEEEEeC
Confidence            9999998764

>d1gmea_ b.15.1.1 (A:) Small heat shock protein {Wheat (Triticum aestivum) [TaxId: 4565]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: HSP20
domain: Small heat shock protein
species: Wheat (Triticum aestivum) [TaxId: 4565]

Probab=98.29  E-value=6.8e-07  Score=74.63  Aligned_cols=76  Identities=33%  Similarity=0.506  Sum_probs=56.4

Q ss_pred             EEEEEeecccCCccceEEEEeCCe-EEEEeeeeeeeccCCcceeeec------cccceEeeCCCccCcceeeEEEeccee
Q 016705          151 VDFKAYLAAGTKIEDLVVVIERGK-YLIVGMLQKKEQEGDTSVKQYH------GNNFRSFLFPDGVDPFGFSTSMDDAGV  223 (384)
Q Consensus       151 ~~~~~~~~~~~k~edl~v~v~~~~-~~v~g~~~k~~~~~~~~~k~~h------~~~~~sy~~p~~vdp~~~~~~~~d~~~  223 (384)
                      +.|++.| ||++.|||-|.++.|+ ++|+|. .+.+.+ +...+ ||      +.|.|+|.+|+.||+=.++|++ .|||
T Consensus        54 ~~i~~~l-PG~~~edi~v~v~~~~~l~i~~~-~~~~~~-~~~~~-~~~~e~~~~~f~r~~~LP~~vd~~~i~A~~-~nGv  128 (150)
T d1gmea_          54 HVFKADL-PGVKKEEVKVEVEDGNVLVVSGE-RTKEKE-DKNDK-WHRVERSSGKFVRRFRLLEDAKVEEVKAGL-ENGV  128 (150)
T ss_dssp             EEEEEEC-TTCCGGGEEEEEETTTEEEEEEC-CCCCCC-CTTCE-EEECCCCCCCEEEEEECSSCCCGGGCEEEE-ETTE
T ss_pred             EEEEEEe-CCCccCCEEEEEEEccceeEEEE-Eecccc-cccce-eeeeeeccceEEEEEECCCCeeeceeEEEE-ECCE
Confidence            5566666 6999999999998765 567885 232222 22222 33      3577999999999999999999 5799


Q ss_pred             EEEEehhh
Q 016705          224 LTLTFKRL  231 (384)
Q Consensus       224 ~~~~~~~~  231 (384)
                      |++++.+.
T Consensus       129 L~I~lpK~  136 (150)
T d1gmea_         129 LTVTVPKA  136 (150)
T ss_dssp             EEEEEECC
T ss_pred             EEEEEEcC
Confidence            99998654

>d1rl1a_ b.15.1.3 (A:) Suppressor of G2 allele of skp1 homolog, gst1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: GS domain
domain: Suppressor of G2 allele of skp1 homolog, gst1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.91  E-value=1.5e-05  Score=60.57  Aligned_cols=82  Identities=10%  Similarity=0.193  Sum_probs=69.8

Q ss_pred             CCeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEee
Q 016705           11 DPVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNR   90 (384)
Q Consensus        11 ~P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rE   90 (384)
                      .+++|++++++...|++  .+||+.++++.|.++++.|.++...    .  .+                           
T Consensus         2 k~ry~W~Qt~~~V~i~i--~~~~~~~~~v~v~~~~~~l~v~~~~----~--~~---------------------------   46 (92)
T d1rl1a_           2 KIKYDWYQTESQVVITL--MIKNVQKNDVNVEFSEKELSALVKL----P--SG---------------------------   46 (92)
T ss_dssp             CCCEEEEECSSEEEEEE--CCCSCCGGGEEEECSSSCEEEEEEC----T--TS---------------------------
T ss_pred             CCceeEEeCCCEEEEEE--EeCCCChHheEEEEecCEEEEEEEc----C--CC---------------------------
Confidence            47899999999998877  9999999999999999999988642    1  11                           


Q ss_pred             cccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCC
Q 016705           91 PNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAF  131 (384)
Q Consensus        91 Rs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe  131 (384)
                         ..|...+.|...|++++.+.++.+ +.+.|+|-|.++.
T Consensus        47 ---~~y~~~~~L~~~I~p~~s~~~~~~-~kiei~L~K~~~~   83 (92)
T d1rl1a_          47 ---EDYNLKLELLHPIIPEQSTFKVLS-TKIEIKLKKPEAV   83 (92)
T ss_dssp             ---SEEEEEECBSSCCCGGGEEEEECS-SSEEEEEECSSCC
T ss_pred             ---cEEEEEEEcCcccCchhcEEEEeC-CEEEEEEEECCCC
Confidence               047778899999999999999999 9999999998654

>d1wh0a_ b.15.1.3 (A:) Ubiquitin carboxyl-terminal hydrolase 19, USP19 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: GS domain
domain: Ubiquitin carboxyl-terminal hydrolase 19, USP19
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.65  E-value=0.0086  Score=49.43  Aligned_cols=98  Identities=5%  Similarity=0.154  Sum_probs=72.2

Q ss_pred             CeeeEEEeC-CeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEee
Q 016705           12 PVSAIWEED-ERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNR   90 (384)
Q Consensus        12 P~VDV~ETD-DeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rE   90 (384)
                      -+-|+|++. +...|.+  -+.|+.+++++|++.++.|.|+-.-......              .++.+.          
T Consensus        20 ir~dwyq~~~~~V~VtI--~~K~v~ke~~~V~f~~~sl~v~~~~~~~~~~--------------~~~~~~----------   73 (134)
T d1wh0a_          20 VKNDSYEKGPDSVVVHV--YVKEICRDTSRVLFREQDFTLIFQTRDGNFL--------------RLHPGC----------   73 (134)
T ss_dssp             CCEEEEEETTTEEEEEE--ECCSBCTTSCEEEECSSEEEEEECBCCHHHH--------------HHSTTC----------
T ss_pred             cccceeecCCCEEEEEE--EeCCCchhheEEEEeCCEEEEEEECCCCcce--------------eecccc----------
Confidence            367999985 6788777  9999999999999999999998632111000              000000          


Q ss_pred             cccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCCCcceE
Q 016705           91 PNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDLRNV  136 (384)
Q Consensus        91 Rs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe~~RrI  136 (384)
                      ...-.|.-.+.|-..|++++-+.+... .-+.|+|.|..+....+.
T Consensus        74 ~~~~~~~~~~~L~~~I~pe~S~~~v~~-~kiei~L~K~~~~~W~~L  118 (134)
T d1wh0a_          74 GPHTTFRWQVKLRNLIEPEQCTFCFTA-SRIDICLRKRQSQRWGGL  118 (134)
T ss_dssp             CTTSCEEEEEEBSSCEEEEEEEEEECS-SEEEEEEEESSSCCCSCS
T ss_pred             CcCeeEEEeeecccccChhHcEEEeCC-CEEEEEEEeCCCCcCcCc
Confidence            001168899999999999999999999 999999999887655444

>d1ejfa_ b.15.1.2 (A:) Co-chaperone p23 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: Co-chaperone p23-like
domain: Co-chaperone p23
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.09  E-value=0.015  Score=45.13  Aligned_cols=80  Identities=13%  Similarity=0.088  Sum_probs=65.1

Q ss_pred             CeeeEEEeCCeEEEEEeccCCCCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceEEeec
Q 016705           12 PVSAIWEEDERSVHFKVFLASGMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSSLNRP   91 (384)
Q Consensus        12 P~VDV~ETDDeyII~A~FDLPGVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~~rER   91 (384)
                      |++.++++++...|++  .+|+.  .+++|+++.+.+.+++....     .+                            
T Consensus         4 ~~~~W~Qt~~~V~i~I--~v~~~--~~~~v~i~~~~l~~~~~~~~-----~~----------------------------   46 (110)
T d1ejfa_           4 ASAKWYDRRDYVFIEF--CVEDS--KDVNVNFEKSKLTFSCLGGS-----DN----------------------------   46 (110)
T ss_dssp             CCEEEEECSSEEEEEE--CCTTE--EEEEEEEETTEEEEEEEETT-----TT----------------------------
T ss_pred             CCcEEEECCCEEEEEE--EeCCC--CCceEEEEeceEEEEEEecC-----CC----------------------------
Confidence            4488999999999887  99985  57888999999999875311     00                            


Q ss_pred             ccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCC
Q 016705           92 NDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAF  131 (384)
Q Consensus        92 s~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe  131 (384)
                        ..|.-.+.|...|+++..+.++.+ +-+.|+|-|..+.
T Consensus        47 --~~y~l~~~L~~~I~~~~s~~~v~~-~kiei~L~K~~~~   83 (110)
T d1ejfa_          47 --FKHLNEIDLFHCIDPNDSKHKRTD-RSILCCLRKGESG   83 (110)
T ss_dssp             --EEEEEEEEBSSCEEEEEEEEEECS-SCEEEEEEESSTT
T ss_pred             --ceEEEEEEcccCcccCccEEEEeC-CEEEEEEEEcCCC
Confidence              046777899999999999999999 9999999998764

>d1wfia_ b.15.1.4 (A:) Nuclear migration protein nudC {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: Nuclear movement domain
domain: Nuclear migration protein nudC
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.57  E-value=0.047  Score=44.06  Aligned_cols=90  Identities=20%  Similarity=0.190  Sum_probs=66.2

Q ss_pred             CCCCeeeEEEeCCeEEEEEeccCC-CCCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceE
Q 016705            9 KPDPVSAIWEEDERSVHFKVFLAS-GMKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSS   87 (384)
Q Consensus         9 ~~~P~VDV~ETDDeyII~A~FDLP-GVkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~   87 (384)
                      ...|.+.+.++.+...|.+.|.+| |++++||.|++..+.|.|.-...      ..                      + 
T Consensus         5 ~~~~~Y~W~Qt~~eV~I~V~~~~~~~~~~~di~v~i~~~~l~v~v~~~------~~----------------------l-   55 (131)
T d1wfia_           5 SSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLKGQ------PP----------------------V-   55 (131)
T ss_dssp             SSCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEETTS------CC----------------------S-
T ss_pred             CCCCCeEEEeeCCEEEEEEEcCCCCCcchhhEEEEeeCCEEEEEEcCC------ce----------------------e-
Confidence            457899999999999888856656 89999999999999999864210      00                      0 


Q ss_pred             EeecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCCC-cceEE
Q 016705           88 LNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFD-LRNVA  137 (384)
Q Consensus        88 ~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe~-~RrIa  137 (384)
                          ..|      .|...|+++...-.+++..+|.|+|-|..+.. ...+-
T Consensus        56 ----l~g------~L~~~I~~des~W~ied~~~l~i~L~K~~~~~~W~~l~   96 (131)
T d1wfia_          56 ----VDG------ELYNEVKVEESSWLIEDGKVVTVHLEKINKMEWWNRLV   96 (131)
T ss_dssp             ----BCS------CBSSCBCSTTCEEEEETTTEEEEEEEBSSSCCCCSCSB
T ss_pred             ----ecc------cccCcccccccEEEEeCCCEEEEEEEECCCCccCHHHc
Confidence                011      46678888888888887358999999986643 34443

>d1wgva_ b.15.1.4 (A:) NudC domain containing protein 3, NUDCD3 (KIAA1068) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: HSP20-like chaperones
superfamily: HSP20-like chaperones
family: Nuclear movement domain
domain: NudC domain containing protein 3, NUDCD3 (KIAA1068)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.44  E-value=0.16  Score=39.93  Aligned_cols=89  Identities=6%  Similarity=0.036  Sum_probs=65.9

Q ss_pred             CCCeeeEEEeCCeEEEEEeccCC-C-CCCCCeEEEEECCEEEEEEEEeecCCCCCCCCCCCcccchhhccccccccCceE
Q 016705           10 PDPVSAIWEEDERSVHFKVFLAS-G-MKQEDVKIVIQDGKLVIMTEATSSHSPSPSSASSSISSFFSFLKKNEEARDTSS   87 (384)
Q Consensus        10 ~~P~VDV~ETDDeyII~A~FDLP-G-VkKEDIsIeVdddvLtISGERk~e~~~~e~sAsss~ss~~s~l~kneEard~~~   87 (384)
                      ..+.+.+.++.++..|.+  .|| | .+.+||+|++..+.|.|+-...      ..                        
T Consensus        18 ~~~~Y~W~Qt~~~V~i~i--~lp~~~~k~kdv~v~~~~~~l~v~v~~~------~~------------------------   65 (124)
T d1wgva_          18 VRENYTWSQDYTDLEVRV--PVPKHVVKGKQVSVALSSSSIRVAMLEE------NG------------------------   65 (124)
T ss_dssp             CCSSCEEEEETTEEEEEE--ECCTTCCSGGGEEEEECSSEEEEEEECS------SS------------------------
T ss_pred             CCCCeEEEeECCEEEEEE--EeCCCCcchhhEEEEEEeCEEEEEEecc------CC------------------------
Confidence            356799999999999887  998 4 4568999999999998874310      00                        


Q ss_pred             EeecccceEEEEEECCCCcccCcceEEeecCcEEEEEEeecCCCCcceE
Q 016705           88 LNRPNDGKIEMNFSLPVGVDPDGFSTSMDDAGVLTLTFKRQRAFDLRNV  136 (384)
Q Consensus        88 ~rERs~GsFsRsI~LPe~VD~dkIkAsLeNdGVLTITLPK~epe~~RrI  136 (384)
                            ..+.-...|...|+++.-.-+++++.+|.+.+.|.......++
T Consensus        66 ------~~~~l~g~L~~~I~~deS~w~i~~~~~~i~~lkK~~~~~W~~L  108 (124)
T d1wgva_          66 ------ERVLMEGKLTHKINTESSLWSLEPGKCVLVNLSKVGEYWWNAI  108 (124)
T ss_dssp             ------EEEEEEEEBSSCBCTTTCEEEECTTSEEEEEECBSSSCCCSCS
T ss_pred             ------cceEEeCcccCcccccccEEEEeCCCEEEEEEEecCCCcChhh
Confidence                  0234456799999999999999983477778888776544444