Citrus Sinensis ID: 016802

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380--
Protein Sequence
MALKFHITNVNFHFCACSSSFSRSTLAFSSSKLSNCSQNRTNGLVAQSSLTDQQQLAFTGEENQLIDALIGIQGRGRSASARQLNTGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDGSNQK
Secondary Structure (PSIPRED)
ccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEEccccccccccccccccccccEEEEEEEcccccEEEEEEEEccccEEEEEEEEEEEEcccEEEEEEEEEEEEEccccccccccccccccccccEEEEEEEEEcccccEEEEEcccccEEEEEccccHHHccccccccccHHHHHHHHHHHccccccHHHHccccccEEEEEEEcccccccccccccccccEEEEccccEEEEEEEEcccEEEEEEEEEEEccccEEEEEEEEcEEEEccEEcccccccEEEEEEEEEEccEEEEEcccccEEEEEEccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEEEccccccccccccccccccccccccccHEEEHHHEEcccccccHHEcccHHHHHHHHHHHHHHHcccccccccccccHHHHcccEEEEEEcccccccccccHHcccccccEEEEEEEEcccccEEEEEEccccccEEEEEEEEEEccccEEEEEEEEEEEEcccccccccccccccccccccccEEEEEEEcccccEEEEccccccEEEEEccccHHHHHHHHHHccccHHHHHHHHHHHccccccccHHHHcccEEEEEcccccccHHHHHHHccccccEEEEccccEEEEEEccccEEEEEEEEEEEccccEEEEEcccEEEEEccccccEcccccEEEEEEEEcccEEEEEccccEEEEEEEccccccc
Coil and Loop (DISEMBL)
malkfhitnvnfhfcacsssfsrstlafsssklsncsqnrtnglvaqssltdQQQLAFTGEENQLIDALIGIqgrgrsasarqlntgssLIEGRWQLmfttrpgtaspiqrtfvgvETFSVFQEIslrtndprvsniVKFSEAIGELKVEAAASIKDGKRILFQFDKaafsfkflpfkfpypvpfrllgdeakgwldttylspsgnlrisrgnkgttfvlqkkteprQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETDswienagnglmGKQIVKKNGQMKFEVDILLgfkfsmtgtyaksstntynvtmddaaiicggfgypikmETKINLQllysddkmrisrGYNNILFVHLrtdgsnqk
Flexible Loop (DISEMBL)
MALKFHITNVNFHFCACSSSFSRSTLAFSSSKLSNCSQNRTNGLVAQSSLTDQQQLAFTGEENQLIDALIGIQGRGRSASARQLNTGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQeislrtndprvsnIVKFSEAIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTylspsgnlrisrgnkgttfvlqkkteprqTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFvhlrtdgsnqk
Low Complexity Region (SEG)
MALKFHITNVNFHFcacsssfsrstlafsssklsNCSQNRTNGLVAQSSLTDQQQLAFTGEENQLIDALIGIQGRGRSASARQLNTGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAeeerellegeWQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDGSNQK
Disordered region (IsUnstruct)
**LKFHITNVNFHFCACSSSF***********************************AFTGEENQLIDALIGIQG*************SSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVL*****************************************LEGEWQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLR*******
Disordered Region (DISOPRED)
*****H*TNVNFHFC****************************************************ALIGIQG**********NTGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAIN******************GEWQMLWSSQME******NAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVH**T******
Disordered Region (DISEMBL)
MALKFHITNVNFHFCACSSSFSRSTLAFSSSKLSNCSQNRTNGLVAQSSLTDQQQLAFTGEENQLIDALIGIQGRGRSASARQLNTGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSN*********LLEGEWQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDGSNQK
Disordered Region (DISPRO)
MALKFHITNVNFHFCACSSSFSRSTLAFSSS*LSNCSQNRTNGLVAQSSLTDQQQLAFTGEENQLIDALIGIQGRGRSASARQLNTGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTD*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MALKFHITNVNFHFCACSSSFSRSTLAFSSSKLSNCSQNRTNGLVAQSSLTDQQQLAFTGEENQLIDALIGIQGRGRSASARQLNTGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDGSNQK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	382	2.2.26 [Sep-21-2011]
Q8LAP6	409	Probable plastid-lipid-as	yes	no	0.976	0.911	0.598	1e-138
Q94KU6	319	Plastid lipid-associated	N/A	no	0.112	0.134	0.511	0.0004

>sp|Q8LAP6|PAP12_ARATH Probable plastid-lipid-associated protein 12, chloroplastic OS=Arabidopsis thaliana GN=PAP12 PE=2 SV=1

 Score =  493 bits (1269), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 244/408 (59%), Positives = 306/408 (75%), Gaps = 35/408 (8%)

Query: 1   MALKFHITNVNFHFCACSSSFSRSTLAFSSSKLS-------------NCSQNRTNGLVAQ 47
           +A++F+   ++   C C    S  +L+  S + +             NC   R +   + 
Sbjct: 2   VAVRFYAVEMSLP-CLCPCPSSPISLSLCSPRFNLLNTTSRRLGLSRNCRTLRIS-CSSS 59

Query: 48  SSLTDQ-QQLAFTGEENQLIDALIGIQGRGRSASARQLN------------------TGS 88
           S++TDQ QQ +F   E +LIDALIGIQGRG+SAS +QLN                  T S
Sbjct: 60  STVTDQTQQSSFNDAELKLIDALIGIQGRGKSASPKQLNDVESAVKVLEGLEGIQNPTDS 119

Query: 89  SLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLR-TNDPRVSNIVKFSEAIGEL 147
            LIEGRW+LMFTTRPGTASPIQRTF GV+ F+VFQ++ L+ TNDPRVSNIVKFS+ IGEL
Sbjct: 120 DLIEGRWRLMFTTRPGTASPIQRTFTGVDVFTVFQDVYLKATNDPRVSNIVKFSDFIGEL 179

Query: 148 KVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNL 207
           KVEA ASIKDGKR+LF+FD+AAF  KFLPFK PYPVPFRLLGDEAKGWLDTTYLSPSGNL
Sbjct: 180 KVEAVASIKDGKRVLFRFDRAAFDLKFLPFKVPYPVPFRLLGDEAKGWLDTTYLSPSGNL 239

Query: 208 RISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQ 267
           RISRGNKGTTFVLQK+T PRQ LL+ IS    V +AI+EF++SN ++AE+  ELLEG WQ
Sbjct: 240 RISRGNKGTTFVLQKETVPRQKLLATISQDKGVAEAIDEFLASNSNSAEDNYELLEGSWQ 299

Query: 268 MLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNV 327
           M+WSSQM TDSWIENA NGLMG+QI++K+G++KFEV+I+  F+FSM G + KS ++TY++
Sbjct: 300 MIWSSQMYTDSWIENAANGLMGRQIIEKDGRIKFEVNIIPAFRFSMKGKFIKSESSTYDL 359

Query: 328 TMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLR 375
            MDDAAII G FGYP+ +   I L++LY+D+KMRISRG++NI+FVH+R
Sbjct: 360 KMDDAAIIGGAFGYPVDITNNIELKILYTDEKMRISRGFDNIIFVHIR 407

Arabidopsis thaliana (taxid: 3702)

>sp|Q94KU6|PAP2_BRACM Plastid lipid-associated protein 2, chloroplastic OS=Brassica campestris GN=PAP2 PE=1 SV=1

 Score = 46.2 bits (108), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 2/45 (4%)

Query: 182 PVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEP 226
           P+ F L GD A+ WL TTYL    ++RISRG+ G+ FVL K+  P
Sbjct: 273 PLKFSLPGDSAQSWLLTTYL--DKDIRISRGDGGSVFVLIKEGSP 315

May stabilize the accumulated carotenoid structures.

Brassica campestris (taxid: 3711)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	382
224053000	399	predicted protein [Populus trichocarpa]	0.989	0.947	0.714	1e-160
255574416	409	structural molecule, putative [Ricinus c	0.884	0.826	0.733	1e-154
225435622	396	PREDICTED: probable plastid-lipid-associ	0.968	0.934	0.664	1e-144
449448776	436	PREDICTED: probable plastid-lipid-associ	0.882	0.772	0.718	1e-143
356576885	377	PREDICTED: probable plastid-lipid-associ	0.931	0.944	0.637	1e-139
297847472	409	plastid-lipid associated protein pap [Ar	0.981	0.916	0.620	1e-137
30694898	409	putative plastid-lipid-associated protei	0.976	0.911	0.598	1e-137
255646338	377	unknown [Glycine max]	0.934	0.946	0.633	1e-135
357445071	388	hypothetical protein MTR_1g116320 [Medic	0.952	0.938	0.620	1e-131
388509688	380	unknown [Lotus japonicus]	0.929	0.934	0.629	1e-130

>gi|224053000|ref|XP_002297657.1| predicted protein [Populus trichocarpa] gi|222844915|gb|EEE82462.1| predicted protein [Populus trichocarpa]

 Score =  569 bits (1467), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 288/403 (71%), Positives = 326/403 (80%), Gaps = 25/403 (6%)

Query: 1   MALKFHIT-NVNFHFCACSSSFSRSTLAFSSSKLSNCSQNRTNGLVAQSSLTD--QQQLA 57
           MALKFH   +++       + F+ S       KL   S  +T+  V QSSL D  QQQ++
Sbjct: 1   MALKFHAAIHLSLQLSPSPTLFAPSFC--KPQKLLKSSVKKTH--VCQSSLVDEQQQQIS 56

Query: 58  FTGEENQLIDALIGIQGRGRSASARQLN------------------TGSSLIEGRWQLMF 99
           F  +ENQLI+AL+GIQGRG+SAS +QLN                  TGS+LIEGRWQLMF
Sbjct: 57  FNEQENQLINALVGIQGRGKSASPQQLNEVGHAVKVLEGLEGVSEPTGSNLIEGRWQLMF 116

Query: 100 TTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDGK 159
           TTRPGTASPIQRTFVGV+ FSVFQE+ LRTNDPRVSNIVKFS AIGELKVEAAA+I++GK
Sbjct: 117 TTRPGTASPIQRTFVGVDFFSVFQEVYLRTNDPRVSNIVKFSNAIGELKVEAAATIENGK 176

Query: 160 RILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFV 219
           RILFQFD+AAFSF FLPFK PYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFV
Sbjct: 177 RILFQFDRAAFSFNFLPFKVPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFV 236

Query: 220 LQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETDSW 279
           LQKKTEPRQ LLSAI TGT V +AINEFI  NQ+ A++E EL++GEWQM+WSSQMETDSW
Sbjct: 237 LQKKTEPRQRLLSAIWTGTGVLEAINEFIKLNQNVAKDEMELIDGEWQMIWSSQMETDSW 296

Query: 280 IENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGF 339
           IENAG GLMGKQIV KNGQ+KF VDILLG +FSMTGT+ KSS NTY+V MDDAAII G F
Sbjct: 297 IENAGRGLMGKQIVTKNGQLKFVVDILLGVRFSMTGTFVKSSPNTYDVKMDDAAIIGGMF 356

Query: 340 GYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDGSNQK 382
           G P++METKINL+LLYSDDK+RISRGY NI+FVH RTDG+ QK
Sbjct: 357 GLPVEMETKINLELLYSDDKIRISRGYKNIVFVHARTDGTRQK 399

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255574416|ref|XP_002528121.1| structural molecule, putative [Ricinus communis] gi|223532460|gb|EEF34251.1| structural molecule, putative [Ricinus communis]

 Score =  550 bits (1416), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 262/357 (73%), Positives = 305/357 (85%), Gaps = 19/357 (5%)

Query: 45  VAQSSLTD-QQQLAFTGEENQLIDALIGIQGRGRSASARQLN------------------ 85
           V QSSL D QQQ++FT  E  LIDALIGIQGRG+SAS +QL                   
Sbjct: 53  VCQSSLVDEQQQISFTEHETHLIDALIGIQGRGKSASPQQLQDVESAVEVLEGLTGVPDP 112

Query: 86  TGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIG 145
           T SSLIEG+WQLMFTTRPGTASPIQRTFVGV+ FSVFQE+ L+TNDPRVSNIV+FS+ IG
Sbjct: 113 TNSSLIEGQWQLMFTTRPGTASPIQRTFVGVDFFSVFQEVYLQTNDPRVSNIVRFSDVIG 172

Query: 146 ELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSG 205
           ELKVEAAA+I++GKRI+F+FD+AAFS +FLPFK PYPVPFRLLGDEAKGWLDTTYLSPSG
Sbjct: 173 ELKVEAAAAIENGKRIIFRFDRAAFSLRFLPFKVPYPVPFRLLGDEAKGWLDTTYLSPSG 232

Query: 206 NLRISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGE 265
           NLRISRGNKGTTFVLQK+TEPRQ LL+AISTGT+V++AI+EF+ +NQ  A +E ELLEGE
Sbjct: 233 NLRISRGNKGTTFVLQKRTEPRQALLAAISTGTKVKEAIDEFVEANQKVATDEIELLEGE 292

Query: 266 WQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTY 325
           WQM+WSSQ ETDSWIENAGNGLMGKQI+KKNGQ+KF VDI+ G +FSMTGTY KS T TY
Sbjct: 293 WQMIWSSQTETDSWIENAGNGLMGKQIIKKNGQLKFLVDIIFGLRFSMTGTYEKSGTKTY 352

Query: 326 NVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDGSNQK 382
           NV MDDAAII G +G P++METKIN++LLY+D+K+RIS+GYN+I+FVH+RTDG  QK
Sbjct: 353 NVIMDDAAIIGGPYGLPVEMETKINMELLYADEKIRISKGYNSIVFVHVRTDGGEQK 409

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225435622|ref|XP_002283329.1| PREDICTED: probable plastid-lipid-associated protein 12, chloroplastic [Vitis vinifera] gi|297746405|emb|CBI16461.3| unnamed protein product [Vitis vinifera]

 Score =  516 bits (1328), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 265/399 (66%), Positives = 306/399 (76%), Gaps = 29/399 (7%)

Query: 3   LKFHITNVNFHFCAC---SSSFSRSTLAFSSSKLSNCSQNRTNGLVAQ---SSLTDQQ-Q 55
           +   I N+ F        S  F   T+  SS +   C  +R N L+ +   SSL D+Q Q
Sbjct: 1   MAIEIANLGFQLNPLPTFSPVFVPRTVLKSSKR---CRFDRRNLLLLRPPASSLVDEQPQ 57

Query: 56  LAFTGEENQLIDALIGIQGRGRSASARQLN------------------TGSSLIEGRWQL 97
           ++FT  EN+LID+L+GIQGRGRSAS +QL+                  T SSLIEGRWQL
Sbjct: 58  VSFTEPENRLIDSLVGIQGRGRSASPQQLSDVESAVQALEGLGGVPDPTSSSLIEGRWQL 117

Query: 98  MFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKD 157
           MFTTRPGTASPIQRTFVGV+ F+VFQE+ LRT+DPRVSNIV+FSEAIGELKVEAAASIKD
Sbjct: 118 MFTTRPGTASPIQRTFVGVDNFNVFQEVYLRTDDPRVSNIVRFSEAIGELKVEAAASIKD 177

Query: 158 GKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTT 217
           GKRILF+FD+AAFSFKFLPFK PYPVPFRLLGDEAKGWLDTTYLS SGNLRISRGNKGTT
Sbjct: 178 GKRILFRFDRAAFSFKFLPFKVPYPVPFRLLGDEAKGWLDTTYLSQSGNLRISRGNKGTT 237

Query: 218 FVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETD 277
           FVLQK TEPRQ  LS IS GT V +AINEFIS NQ+ A  E +LLEGEWQM+WSSQ ETD
Sbjct: 238 FVLQKNTEPRQRFLSVISKGTGVMEAINEFISLNQNKATGEPQLLEGEWQMIWSSQQETD 297

Query: 278 SWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICG 337
           SW+ENA NGLMG QIVK   Q+KF VDILLGF+FSM GT+ K+   TY VTM+DAAI+ G
Sbjct: 298 SWLENAANGLMGTQIVKGE-QLKFVVDILLGFRFSMIGTFVKTGATTYEVTMNDAAIVAG 356

Query: 338 GFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRT 376
             G P++ME+K NL+LLY+DDK+RI+RG+ NI FVHLR 
Sbjct: 357 PVGLPMEMESKFNLELLYTDDKIRITRGFRNITFVHLRV 395

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449448776|ref|XP_004142141.1| PREDICTED: probable plastid-lipid-associated protein 12, chloroplastic-like [Cucumis sativus] gi|449503596|ref|XP_004162081.1| PREDICTED: probable plastid-lipid-associated protein 12, chloroplastic-like [Cucumis sativus]

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 258/359 (71%), Positives = 291/359 (81%), Gaps = 22/359 (6%)

Query: 44  LVAQSSLTDQQQ---LAFTGEENQLIDALIGIQGRGRSASARQLN--------------- 85
           L  +SSL D+QQ   ++F+  EN LIDALIG+QGRGRS S++QL+               
Sbjct: 78  LRCRSSLVDEQQKEVVSFSQPENSLIDALIGVQGRGRSVSSQQLSNVERAVSVLEGLEGV 137

Query: 86  ---TGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSE 142
              T SSLIEGRWQL+FTTRPGTAS IQRTFVGV+ FSVFQEI LRTNDPRVSNIVKFS+
Sbjct: 138 RDPTNSSLIEGRWQLVFTTRPGTASIIQRTFVGVDFFSVFQEIFLRTNDPRVSNIVKFSD 197

Query: 143 AIGELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLS 202
           AIGELKVEAAAS+KDGKRILFQFD+AAFSFKFLPFK PYPVPF+LLGDEAKGWLDTTYLS
Sbjct: 198 AIGELKVEAAASVKDGKRILFQFDRAAFSFKFLPFKVPYPVPFKLLGDEAKGWLDTTYLS 257

Query: 203 PSGNLRISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELL 262
           PSGNLRISRGNKGTTFVLQK+TE RQ LL AIST   VE+AI++ IS NQ+  + E ELL
Sbjct: 258 PSGNLRISRGNKGTTFVLQKQTEARQKLLLAISTDKGVEEAIDKLISENQNENKFEEELL 317

Query: 263 EGEWQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSST 322
           EG W MLWSSQMETDSWIENA NGLMG Q++ KNGQMKF VD+LLG +FSM GT  KS  
Sbjct: 318 EGGWNMLWSSQMETDSWIENAANGLMGMQVI-KNGQMKFGVDMLLGLRFSMIGTLVKSGD 376

Query: 323 NTYNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDGSNQ 381
           N Y+VTMDDAAII G FGYP+ ME++  LQLLY+D K+RI+RGYNNILFVH+R   S Q
Sbjct: 377 NAYDVTMDDAAIIGGPFGYPLGMESRFKLQLLYNDGKIRITRGYNNILFVHVRVAESKQ 435

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356576885|ref|XP_003556560.1| PREDICTED: probable plastid-lipid-associated protein 12, chloroplastic-like [Glycine max]

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 253/397 (63%), Positives = 302/397 (76%), Gaps = 41/397 (10%)

Query: 1   MALKFHITNVNFHF-CACSSSFSRSTLAFSSSKLSNCSQNRTNGLVAQSSLTDQQQLAFT 59
           MALK  + N+ FH    CS    +      SSK+                    +Q++FT
Sbjct: 1   MALK--LVNLGFHSSIPCSPRPLKDRFVLRSSKV--------------------EQISFT 38

Query: 60  GEENQLIDALIGIQGRGRSASARQLN------------------TGSSLIEGRWQLMFTT 101
             EN LI+AL+GIQGRGRS+S +QLN                  T S+LIEGRWQL+FTT
Sbjct: 39  ESENSLIEALLGIQGRGRSSSRQQLNAVERAVQVLERLGGVPDPTKSNLIEGRWQLIFTT 98

Query: 102 RPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDGKRI 161
           RPGTASPIQRTFVGV+ FSVFQE+ LRTNDPRV NIV FS+AIGELKVEAAASI+DGKRI
Sbjct: 99  RPGTASPIQRTFVGVDFFSVFQEVYLRTNDPRVCNIVSFSDAIGELKVEAAASIEDGKRI 158

Query: 162 LFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQ 221
           LF+FD+AAFSFKFLPFK PYPVPFRLLGDEAKGWLDTTYLS SGNLRISRGNKGTTFVLQ
Sbjct: 159 LFRFDRAAFSFKFLPFKVPYPVPFRLLGDEAKGWLDTTYLSSSGNLRISRGNKGTTFVLQ 218

Query: 222 KKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETDSWIE 281
           K+TEPRQ LL+AIS+G  +++AI+E IS  Q+T +E+ EL EGEWQM+W+SQ  TDSWIE
Sbjct: 219 KQTEPRQRLLTAISSGKGIKEAIDELISLKQNTGQEDPELEEGEWQMMWNSQTVTDSWIE 278

Query: 282 NAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGFGY 341
           NA NGLMGKQI++KNG++KF VDILLG KFSM+G + K+ +  Y VTMDDAAII G FGY
Sbjct: 279 NAVNGLMGKQIIRKNGRIKFLVDILLGLKFSMSGNFVKTGSGVYGVTMDDAAIIGGPFGY 338

Query: 342 PIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDG 378
           P++++    L+LLYSD+K+R+SRG N+ILFVH+RTD 
Sbjct: 339 PLELKNNFILELLYSDEKLRVSRGNNSILFVHVRTDA 375

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297847472|ref|XP_002891617.1| plastid-lipid associated protein pap [Arabidopsis lyrata subsp. lyrata] gi|297337459|gb|EFH67876.1| plastid-lipid associated protein pap [Arabidopsis lyrata subsp. lyrata]

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 252/406 (62%), Positives = 311/406 (76%), Gaps = 31/406 (7%)

Query: 1   MALKFHITNVNFH-FCACSSSFS-------RSTLAFSSSKLSNCSQN-RTNGLVAQSS-- 49
           +AL+F+   ++    C C SS         R  L  ++SK  + S+N RT  +   SS  
Sbjct: 2   VALRFYTVEMSLPCLCQCPSSPISLSSSSPRYNLLNTTSKRLDSSRNCRTLRISCSSSST 61

Query: 50  LTDQ-QQLAFTGEENQLIDALIGIQGRGRSASARQLN------------------TGSSL 90
           +TDQ QQ +F   E +LIDALIGIQGRG+SAS RQLN                  T S L
Sbjct: 62  VTDQTQQSSFNDAELKLIDALIGIQGRGKSASPRQLNDVDSAVKVLEGLEGIQNPTDSDL 121

Query: 91  IEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLRT-NDPRVSNIVKFSEAIGELKV 149
           IEGRW+LMFTTRPGTASPIQRTF GV+ F+VFQ++ L+T NDPRVSNIVKFS+ IGELKV
Sbjct: 122 IEGRWRLMFTTRPGTASPIQRTFTGVDVFTVFQDVYLKTTNDPRVSNIVKFSDFIGELKV 181

Query: 150 EAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRI 209
           EAAASIKDGKR+LF+FD+AAFS KFLPFK PYPVPFRLLGDEAKGWLDTTYLSPSGNLRI
Sbjct: 182 EAAASIKDGKRVLFRFDRAAFSLKFLPFKVPYPVPFRLLGDEAKGWLDTTYLSPSGNLRI 241

Query: 210 SRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQML 269
           SRGNKGTTFVLQK+T PRQ LL+ IS    V +AI+EF+++N + AE++ ELLEG WQM+
Sbjct: 242 SRGNKGTTFVLQKETLPRQKLLATISQDKGVAEAIDEFLATNSNPAEDDYELLEGSWQMI 301

Query: 270 WSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTM 329
           WSSQM TDSWIENA NGLMG+QI++K+G++KFEV+I+  F+FSM G + KS ++TYN+ M
Sbjct: 302 WSSQMFTDSWIENAANGLMGRQIIEKDGRIKFEVNIIPAFRFSMKGKFIKSESSTYNLKM 361

Query: 330 DDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLR 375
           DDAAII G FGYP+ +   I L++LY+D+K+RISRG++NI+FVH+R
Sbjct: 362 DDAAIIGGAFGYPVDITNNIELKILYTDEKLRISRGFDNIIFVHIR 407

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30694898|ref|NP_175522.2| putative plastid-lipid-associated protein 12 [Arabidopsis thaliana] gi|75154826|sp|Q8LAP6.1|PAP12_ARATH RecName: Full=Probable plastid-lipid-associated protein 12, chloroplastic; AltName: Full=Fibrillin-12; Flags: Precursor gi|21593276|gb|AAM65225.1| unknown [Arabidopsis thaliana] gi|26452116|dbj|BAC43147.1| unknown protein [Arabidopsis thaliana] gi|28950975|gb|AAO63411.1| At1g51115 [Arabidopsis thaliana] gi|332194502|gb|AEE32623.1| putative plastid-lipid-associated protein 12 [Arabidopsis thaliana]

 Score =  493 bits (1269), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 244/408 (59%), Positives = 306/408 (75%), Gaps = 35/408 (8%)

Query: 1   MALKFHITNVNFHFCACSSSFSRSTLAFSSSKLS-------------NCSQNRTNGLVAQ 47
           +A++F+   ++   C C    S  +L+  S + +             NC   R +   + 
Sbjct: 2   VAVRFYAVEMSLP-CLCPCPSSPISLSLCSPRFNLLNTTSRRLGLSRNCRTLRIS-CSSS 59

Query: 48  SSLTDQ-QQLAFTGEENQLIDALIGIQGRGRSASARQLN------------------TGS 88
           S++TDQ QQ +F   E +LIDALIGIQGRG+SAS +QLN                  T S
Sbjct: 60  STVTDQTQQSSFNDAELKLIDALIGIQGRGKSASPKQLNDVESAVKVLEGLEGIQNPTDS 119

Query: 89  SLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLR-TNDPRVSNIVKFSEAIGEL 147
            LIEGRW+LMFTTRPGTASPIQRTF GV+ F+VFQ++ L+ TNDPRVSNIVKFS+ IGEL
Sbjct: 120 DLIEGRWRLMFTTRPGTASPIQRTFTGVDVFTVFQDVYLKATNDPRVSNIVKFSDFIGEL 179

Query: 148 KVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNL 207
           KVEA ASIKDGKR+LF+FD+AAF  KFLPFK PYPVPFRLLGDEAKGWLDTTYLSPSGNL
Sbjct: 180 KVEAVASIKDGKRVLFRFDRAAFDLKFLPFKVPYPVPFRLLGDEAKGWLDTTYLSPSGNL 239

Query: 208 RISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQ 267
           RISRGNKGTTFVLQK+T PRQ LL+ IS    V +AI+EF++SN ++AE+  ELLEG WQ
Sbjct: 240 RISRGNKGTTFVLQKETVPRQKLLATISQDKGVAEAIDEFLASNSNSAEDNYELLEGSWQ 299

Query: 268 MLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNV 327
           M+WSSQM TDSWIENA NGLMG+QI++K+G++KFEV+I+  F+FSM G + KS ++TY++
Sbjct: 300 MIWSSQMYTDSWIENAANGLMGRQIIEKDGRIKFEVNIIPAFRFSMKGKFIKSESSTYDL 359

Query: 328 TMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLR 375
            MDDAAII G FGYP+ +   I L++LY+D+KMRISRG++NI+FVH+R
Sbjct: 360 KMDDAAIIGGAFGYPVDITNNIELKILYTDEKMRISRGFDNIIFVHIR 407

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255646338|gb|ACU23652.1| unknown [Glycine max]

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 251/396 (63%), Positives = 301/396 (76%), Gaps = 39/396 (9%)

Query: 1   MALKFHITNVNFHFCACSSSFSRSTLAFSSSKLSNCSQNRTNGLVAQSSLTDQQQLAFTG 60
           MALK  + N+ FH     SS  RS                 +  V +SS    +Q++FT 
Sbjct: 1   MALK--LVNLGFH-----SSIPRSPRPLK------------DRFVLRSSKV--EQISFTE 39

Query: 61  EENQLIDALIGIQGRGRSASARQLN------------------TGSSLIEGRWQLMFTTR 102
            EN LI+AL+GIQGRGRS+S +QLN                  T S+LIEGRWQL+FTTR
Sbjct: 40  SENSLIEALLGIQGRGRSSSRQQLNAVERAVQVLERLGGVPDPTKSNLIEGRWQLIFTTR 99

Query: 103 PGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDGKRIL 162
           PGTASPIQRTFVGV+ FSVFQE+ LRTNDPRV NIV FS+AIGELKVEAAASI+DGKRI 
Sbjct: 100 PGTASPIQRTFVGVDFFSVFQEVYLRTNDPRVCNIVSFSDAIGELKVEAAASIEDGKRIH 159

Query: 163 FQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQK 222
           F+F++AAFSFKFLPFK PYPVPFRLLGDEAKG LDTTYLS SGNLRISRGNKGTTF LQK
Sbjct: 160 FRFNRAAFSFKFLPFKVPYPVPFRLLGDEAKGRLDTTYLSSSGNLRISRGNKGTTFALQK 219

Query: 223 KTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETDSWIEN 282
           +TEPRQ LL+AIS+G  +++AI+E IS  Q+T +E+ EL EGEWQM+W+SQ  TDSWIEN
Sbjct: 220 QTEPRQRLLTAISSGKGIKEAIDELISLKQNTGQEDPELEEGEWQMMWNSQTVTDSWIEN 279

Query: 283 AGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGGFGYP 342
           A NGLMGKQI++KNG++KF VDILLG KFSM+G + K+ +  Y VTMDDAAII G FGYP
Sbjct: 280 AVNGLMGKQIIRKNGRIKFLVDILLGLKFSMSGNFVKTGSGVYGVTMDDAAIIGGPFGYP 339

Query: 343 IKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDG 378
           ++++    L+LLYSD+K+R+SRG N+ILFVH+RTD 
Sbjct: 340 LELKNNFILELLYSDEKLRVSRGNNSILFVHVRTDA 375

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445071|ref|XP_003592813.1| hypothetical protein MTR_1g116320 [Medicago truncatula] gi|355481861|gb|AES63064.1| hypothetical protein MTR_1g116320 [Medicago truncatula]

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 249/401 (62%), Positives = 299/401 (74%), Gaps = 37/401 (9%)

Query: 1   MALKFHITNVN---FHFCACSSSFSRSTLAFSSSKLSNCSQNRTNGLVAQSSLTDQQQLA 57
           MAL   + NVN   F  C+  S+F               S N +N     +  +  +Q++
Sbjct: 1   MALTLRVVNVNSIGFESCSRCSTF--------------ISPNPSNSRFVSAGCSKVEQIS 46

Query: 58  FTGEE--NQLIDALIGIQGRGRSASARQLN------------------TGSSLIEGRWQL 97
              EE  N LI AL+GIQGRGRS+S +QLN                  T SSLIEGRWQL
Sbjct: 47  IVTEESENSLIQALVGIQGRGRSSSPQQLNAIERAIQVLEHIGGVSDPTNSSLIEGRWQL 106

Query: 98  MFTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKD 157
           +FTTRPGTASPIQRTFVGV+ FSVFQE+ L+TNDPRV+NIV FS+AIGELKVEAAASI D
Sbjct: 107 IFTTRPGTASPIQRTFVGVDFFSVFQEVYLQTNDPRVTNIVSFSDAIGELKVEAAASIGD 166

Query: 158 GKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTT 217
           GKRILF+FD+AAFSFKFLPFK PYPVPF+LLGDEAKGWLDTTYLS SGNLRISRGNKGTT
Sbjct: 167 GKRILFRFDRAAFSFKFLPFKVPYPVPFKLLGDEAKGWLDTTYLSHSGNLRISRGNKGTT 226

Query: 218 FVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETD 277
           FVLQK+TEPRQ LL+AIS+G  V +AI++ IS N+++ EE+ EL EGEWQM+W+SQ  TD
Sbjct: 227 FVLQKQTEPRQKLLTAISSGVGVREAIDKLISLNKNSGEEDPELEEGEWQMIWNSQTVTD 286

Query: 278 SWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICG 337
           SW+ENA NGLMGKQIV+KNG++K+ V+ILLG KFSM+G + KSS   Y VTMDDAAII G
Sbjct: 287 SWLENAANGLMGKQIVEKNGRIKYVVNILLGLKFSMSGIFVKSSPKVYEVTMDDAAIIGG 346

Query: 338 GFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTDG 378
            FGYP++   K  L++L++D K+RISRG N I+FVH RT+ 
Sbjct: 347 PFGYPLEFGKKFILEILFNDGKVRISRGDNEIIFVHARTNA 387

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388509688|gb|AFK42910.1| unknown [Lotus japonicus]

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 251/399 (62%), Positives = 291/399 (72%), Gaps = 44/399 (11%)

Query: 1   MALKFHITNVNFH----FCACSSSFSRSTLAFSSSKLSNCSQNRTNGLVAQSSLTDQQQL 56
           MALK  + N+ FH       CSSS  R       S +  CSQ               +Q+
Sbjct: 1   MALK--LVNLGFHPFTLTPPCSSSKPRQC-----SFVFRCSQ--------------VEQI 39

Query: 57  AFTGEENQLIDALIGIQGRGRSASARQLN------------------TGSSLIEGRWQLM 98
           +    E  LI+A++G QGRGRS+S  QLN                  T S+LIEGRWQL 
Sbjct: 40  SIAESEYSLIEAILGTQGRGRSSSPNQLNAIERAIQVLERLGGVPDPTNSNLIEGRWQLA 99

Query: 99  FTTRPGTASPIQRTFVGVETFSVFQEISLRTNDPRVSNIVKFSEAIGELKVEAAASIKDG 158
           FTTRPGTASPIQRTFVGV+ FSVFQEISLRTNDPRV NIV FS+AIGELKVEAAASI+DG
Sbjct: 100 FTTRPGTASPIQRTFVGVDFFSVFQEISLRTNDPRVGNIVSFSDAIGELKVEAAASIEDG 159

Query: 159 KRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTF 218
           KRILF+FD+AAFSFKFLPFK PYPVPF+LLGDEAKGWLDTTYLS SGNLRIS+GNKGTTF
Sbjct: 160 KRILFRFDRAAFSFKFLPFKVPYPVPFKLLGDEAKGWLDTTYLSHSGNLRISKGNKGTTF 219

Query: 219 VLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAEEERELLEGEWQMLWSSQMETDS 278
           VLQK+TEPRQ LL+AIS+G  V++AI+E IS  ++T EE       EWQM+W+SQ  TDS
Sbjct: 220 VLQKQTEPRQRLLTAISSGKGVKEAIDELISLKKNTGEEPELEEG-EWQMIWNSQSVTDS 278

Query: 279 WIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNTYNVTMDDAAIICGG 338
           W+ENA NGLMGKQI+ KNGQ+KF VDILLG KFSMTG + K  +  Y VTMDDAAII G 
Sbjct: 279 WLENAANGLMGKQIIGKNGQIKFLVDILLGLKFSMTGNFIKIGSKMYEVTMDDAAIIGGA 338

Query: 339 FGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLRTD 377
           FG P+ ME K  L+LL+SD K+RISRGYN +LFVH+R+D
Sbjct: 339 FGLPLNMENKFVLELLFSDKKVRISRGYNEVLFVHIRSD 377

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	382
TAIR|locus:2026052	409	AT1G51110 [Arabidopsis thalian	0.759	0.709	0.694	4.6e-120
TAIR|locus:2132006	310	AT4G22240 [Arabidopsis thalian	0.112	0.138	0.488	5.3e-05

TAIR|locus:2026052 AT1G51110 [Arabidopsis thaliana (taxid:3702)]

 Score = 1078 (384.5 bits), Expect = 4.6e-120, Sum P(2) = 4.6e-120
 Identities = 202/291 (69%), Positives = 245/291 (84%)

Query:    86 TGSSLIEGRWQLMFTTRPGTASPIQRTFVGVETFSVFQEISLR-TNDPRVSNIVKFSEAI 144
             T S LIEGRW+LMFTTRPGTASPIQRTF GV+ F+VFQ++ L+ TNDPRVSNIVKFS+ I
Sbjct:   117 TDSDLIEGRWRLMFTTRPGTASPIQRTFTGVDVFTVFQDVYLKATNDPRVSNIVKFSDFI 176

Query:   145 GELKVEAAASIKDGKRILFQFDKAAFSFKFLPFKFPYPVPFRLLGDEAKGWLDTTYLSPS 204
             GELKVEA ASIKDGKR+LF+FD+AAF  KFLPFK PYPVPFRLLGDEAKGWLDTTYLSPS
Sbjct:   177 GELKVEAVASIKDGKRVLFRFDRAAFDLKFLPFKVPYPVPFRLLGDEAKGWLDTTYLSPS 236

Query:   205 GNLRISRGNKGTTFVLQKKTEPRQTLLSAISTGTQVEQAINEFISSNQSTAXXXXXXXXX 264
             GNLRISRGNKGTTFVLQK+T PRQ LL+ IS    V +AI+EF++SN ++A         
Sbjct:   237 GNLRISRGNKGTTFVLQKETVPRQKLLATISQDKGVAEAIDEFLASNSNSAEDNYELLEG 296

Query:   265 XWQMLWSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGFKFSMTGTYAKSSTNT 324
              WQM+WSSQM TDSWIENA NGLMG+QI++K+G++KFEV+I+  F+FSM G + KS ++T
Sbjct:   297 SWQMIWSSQMYTDSWIENAANGLMGRQIIEKDGRIKFEVNIIPAFRFSMKGKFIKSESST 356

Query:   325 YNVTMDDAAIICGGFGYPIKMETKINLQLLYSDDKMRISRGYNNILFVHLR 375
             Y++ MDDAAII G FGYP+ +   I L++LY+D+KMRISRG++NI+FVH+R
Sbjct:   357 YDLKMDDAAIIGGAFGYPVDITNNIELKILYTDEKMRISRGFDNIIFVHIR 407

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0016020 "membrane" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

GO:0009941 "chloroplast envelope" evidence=IDA

GO:0006098 "pentose-phosphate shunt" evidence=RCA

GO:0010027 "thylakoid membrane organization" evidence=RCA

TAIR|locus:2132006 AT4G22240 [Arabidopsis thaliana (taxid:3702)]

 Score = 99 (39.9 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
 Identities = 22/45 (48%), Positives = 29/45 (64%)

Query:   182 PVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQKKTEP 226
             P+ F L  D A+ WL TTYL    ++RISRG+ G+ FVL K+  P
Sbjct:   264 PLKFSLPADNAQSWLLTTYLDK--DIRISRGDGGSVFVLIKEGSP 306

GO:0005198 "structural molecule activity" evidence=IEA;ISS

GO:0008150 "biological_process" evidence=ND

GO:0009507 "chloroplast" evidence=ISM;IEA;IDA

GO:0031977 "thylakoid lumen" evidence=IDA

GO:0009579 "thylakoid" evidence=IDA

GO:0009535 "chloroplast thylakoid membrane" evidence=IDA

GO:0010287 "plastoglobule" evidence=IDA

GO:0009534 "chloroplast thylakoid" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8LAP6	PAP12_ARATH	No assigned EC number	0.5980	0.9764	0.9119	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	gw1.I.6685.1	hypothetical protein (348 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_Genewise1_v1.C_LG_X6026	hypothetical protein (200 aa)				•			•		0.526
	gw1.III.1875.1	hypothetical protein (239 aa)				•			•		0.441
	estExt_fgenesh4_pg.C_1520028	hypothetical protein (236 aa)				•			•		0.428
	estExt_Genewise1_v1.C_LG_III1082	SubName- Full=Putative uncharacterized protein; (144 aa)				•					0.408

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	382
pfam04755	196	pfam04755, PAP_fibrillin, PAP_fibrillin	2e-37

>gnl|CDD|218245 pfam04755, PAP_fibrillin, PAP_fibrillin

 Score =  133 bits (337), Expect = 2e-37
 Identities = 57/195 (29%), Positives = 83/195 (42%), Gaps = 43/195 (22%)

Query: 64  QLIDALIGIQGRGRSASARQLNTGSSLIE-------------------GRWQLMFTTRPG 104
           +L+DA+ G   RG  AS+       S +                    G+W+L++TT   
Sbjct: 6   KLLDAIYGTN-RGLRASSDDRAEIESAVTQLEALNPTPAPTESLDLLNGKWRLLYTTSKE 64

Query: 105 TASPIQRTFVG-VETFSVFQEISLRTNDPRVSNIVKFSE--AIGELKVEAAASIKDGKRI 161
               + R  +  ++   ++Q I    N+  V N V FS   A G   V A   I+  KR+
Sbjct: 65  LLPLLARGRLPLLKVGQIYQTI--DVNNLTVYNSVTFSGPLAEGSFSVRAKFEIRSPKRV 122

Query: 162 LFQFDKAAFSFKFLPFKF----------------PYPVPFRLLGDEAKGWLDTTYLSPSG 205
             +F++       L                      P+PF L GD AKGWL+TTYL    
Sbjct: 123 QIRFERGVLGTPQLLKGSLTPLQDTASNIRGISSQLPLPFPLSGDRAKGWLETTYLDE-- 180

Query: 206 NLRISRGNKGTTFVL 220
           +LRISRG+ G+ FVL
Sbjct: 181 DLRISRGDGGSLFVL 195

This family identifies a conserved region found in a number of plastid lipid-associated proteins (PAPs), and in a number of putative fibrillin proteins. Length = 196

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	382
PF04755	198	PAP_fibrillin: PAP_fibrillin; InterPro: IPR006843	100.0
PF04755	198	PAP_fibrillin: PAP_fibrillin; InterPro: IPR006843	99.97

>PF04755 PAP_fibrillin: PAP_fibrillin; InterPro: IPR006843 This family identifies a conserved domain found in a number of plastid lipid-associated proteins (PAPs) that are thought to form together with other plastoglobulins a coat on the surface of the lipoprotein particle

Probab=100.00  E-value=8.1e-33  Score=254.02  Aligned_cols=158  Identities=40%  Similarity=0.677  Sum_probs=133.8

Q ss_pred             hHHHHHHHHHhcccCCCccccChhhhc------------------cCC-CcccceEEEEEecCCCCCCcccc-cccCcee
Q 016802           59 TGEENQLIDALIGIQGRGRSASARQLN------------------TGS-SLIEGRWQLMFTTRPGTASPIQR-TFVGVET  118 (382)
Q Consensus        59 ~~~K~~LL~ai~g~~~RG~~as~e~~~------------------~~~-~lL~G~W~LiYTS~~~~~sp~~~-~~~gl~~  118 (382)
                      +++|++||++++++ +||+.+++++++                  .++ ++|+|+|+|+|||+++..++++. ..+++..
T Consensus         1 ~~~K~~Ll~~~~~~-~rG~~~~~~~~~~i~~~v~~LE~~np~~~p~~s~~~L~G~W~Lvytt~~~~~~~l~~~~~~~~~~   79 (198)
T PF04755_consen    1 QDLKQELLQAVAGT-NRGLRASPEDREEIEELVEELEALNPTPDPADSLPLLDGRWELVYTTSPEIRSLLQRGRLPGVRV   79 (198)
T ss_pred             ChHHHHHHHHHhcc-CCCccCCHHHHHHHHHHHHHHHHhCCCCCCcCCchhcCcEEEEEeecCCCccccccccccccccc
Confidence            47999999999999 999999999986                  334 89999999999999998877664 4567888


Q ss_pred             eeeEEEEEeeCCCCcEEEEEEeec---cceEEEEEEEEEEeCCcEEEEEEEeeEeeeccc-----------------ccc
Q 016802          119 FSVFQEISLRTNDPRVSNIVKFSE---AIGELKVEAAASIKDGKRILFQFDKAAFSFKFL-----------------PFK  178 (382)
Q Consensus       119 ~~i~Q~I~id~~~~~v~NvV~f~~---~~g~l~V~A~~~v~~~~rv~V~F~~~~v~~~~~-----------------~~~  178 (382)
                      ++|||.|  |.+++++.|+|+|..   ..|.+.+.|.+++.+++|+.|+|+++.+.++..                 ...
T Consensus        80 ~~v~Q~i--d~~~~~~~N~v~~~~~~~~~~~~~v~a~~~~~~~~rv~v~f~~~~l~~~~~l~~~l~~~~~~~~~v~~~~~  157 (198)
T PF04755_consen   80 GRVFQTI--DADNGRVENVVELSGFPLLEGSVSVRASLEVRSPRRVEVTFERASLKPPSLLKGVLGPLKDALNNVPRGIS  157 (198)
T ss_pred             cceEEEE--ECCCceEEEEEEEeccCceEEEEEEEEEEEEccccEEEEEEEeeEEcccceeeccchhhhhhhhhcccccc
Confidence            9999999  889999999999776   367899999999999999999999999865210                 112


Q ss_pred             cCCCccccccCCCcceEEEEEEecCCCceEEEeCCCCcEEEEe
Q 016802          179 FPYPVPFRLLGDEAKGWLDTTYLSPSGNLRISRGNKGTTFVLQ  221 (382)
Q Consensus       179 ~P~p~~f~l~~~~~~Gwld~TYLDe~~dlRIsRG~kG~vFVl~  221 (382)
                      ..+|+++++.+..++||||||||||  ||||+||++|++|||.
T Consensus       158 ~~~~~~~~~~~~~~~g~l~~tYLDe--dlRI~Rg~~G~~fVl~  198 (198)
T PF04755_consen  158 DELPVPLPLPGGSPKGWLDTTYLDE--DLRISRGNKGSLFVLK  198 (198)
T ss_pred             cccccccccCCCCCceEEEEEEECC--CeEEEEcCCCCEEEeC
Confidence            2345556666678999999999999  9999999999999984

The coat may contain receptors for attachment to the thylakoid membrane as well as regulatory proteins that may function in the transfer of lipids to and from the thylakoid membranes.). This entry also represents a number of putative fibrillin proteins.; GO: 0005198 structural molecule activity, 0009507 chloroplast

>PF04755 PAP_fibrillin: PAP_fibrillin; InterPro: IPR006843 This family identifies a conserved domain found in a number of plastid lipid-associated proteins (PAPs) that are thought to form together with other plastoglobulins a coat on the surface of the lipoprotein particle

Probab=99.97  E-value=3.1e-31  Score=243.47  Aligned_cols=150  Identities=24%  Similarity=0.348  Sum_probs=122.5

Q ss_pred             CccchhhhcccC-----------chHHHHHHHHHHHcCCCCCcccc-cccceeEEEEEecccCcchhhhhh-cCCCC---
Q 016802          225 EPRQTLLSAIST-----------GTQVEQAINEFISSNQSTAEEER-ELLEGEWQMLWSSQMETDSWIENA-GNGLM---  288 (382)
Q Consensus       225 ~~~q~ll~~i~~-----------~~~I~~~i~eLea~np~~~P~~~-~lL~G~W~L~ySS~~e~~~~l~~~-~~gl~---  288 (382)
                      +.+|+|+++++.           ..+|.++|++||++||++.|.++ ++|+|+|+|+|||+.+..+.++.- ..+..   
T Consensus         2 ~~K~~Ll~~~~~~~rG~~~~~~~~~~i~~~v~~LE~~np~~~p~~s~~~L~G~W~Lvytt~~~~~~~l~~~~~~~~~~~~   81 (198)
T PF04755_consen    2 DLKQELLQAVAGTNRGLRASPEDREEIEELVEELEALNPTPDPADSLPLLDGRWELVYTTSPEIRSLLQRGRLPGVRVGR   81 (198)
T ss_pred             hHHHHHHHHHhccCCCccCCHHHHHHHHHHHHHHHHhCCCCCCcCCchhcCcEEEEEeecCCCccccccccccccccccc
Confidence            457888888885           24899999999999999999865 999999999999999887666531 12222   


Q ss_pred             CeeEEc-cCCceEEEEEecC--C--eEEEEEEEEEEeCCcEEEEEEeecEEEe-------------------------cc
Q 016802          289 GKQIVK-KNGQMKFEVDILL--G--FKFSMTGTYAKSSTNTYNVTMDDAAIIC-------------------------GG  338 (382)
Q Consensus       289 ~~Q~Id-~~~~~~N~v~~~~--~--~~~~v~a~~e~~s~~rv~V~F~~~~i~~-------------------------g~  338 (382)
                      .||+|| +++++.|+|++.+  .  +.+.+.|++++.+++|+.|+|+++.+..                         .+
T Consensus        82 v~Q~id~~~~~~~N~v~~~~~~~~~~~~~v~a~~~~~~~~rv~v~f~~~~l~~~~~l~~~l~~~~~~~~~v~~~~~~~~~  161 (198)
T PF04755_consen   82 VFQTIDADNGRVENVVELSGFPLLEGSVSVRASLEVRSPRRVEVTFERASLKPPSLLKGVLGPLKDALNNVPRGISDELP  161 (198)
T ss_pred             eEEEEECCCceEEEEEEEeccCceEEEEEEEEEEEEccccEEEEEEEeeEEcccceeeccchhhhhhhhhcccccccccc
Confidence            399999 8999999999743  2  5778999999999999999999998843                         12


Q ss_pred             ceecCC-CCceeEEEEEEeeCceeEEeCCCCeEEEEE
Q 016802          339 FGYPIK-METKINLQLLYSDDKMRISRGYNNILFVHL  374 (382)
Q Consensus       339 ~~~p~~-~~~~gwLeitYLDe~lRI~RG~~GslFVl~  374 (382)
                      ++++++ ..++||||||||||+|||+||++|++|||.
T Consensus       162 ~~~~~~~~~~~g~l~~tYLDedlRI~Rg~~G~~fVl~  198 (198)
T PF04755_consen  162 VPLPLPGGSPKGWLDTTYLDEDLRISRGNKGSLFVLK  198 (198)
T ss_pred             cccccCCCCCceEEEEEEECCCeEEEEcCCCCEEEeC
Confidence            223333 357899999999999999999999999983

The coat may contain receptors for attachment to the thylakoid membrane as well as regulatory proteins that may function in the transfer of lipids to and from the thylakoid membranes.). This entry also represents a number of putative fibrillin proteins.; GO: 0005198 structural molecule activity, 0009507 chloroplast

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	382
4gzv_A	142	Hypothetical protein; AN eight-stranded beta barre	83.47

>4gzv_A Hypothetical protein; AN eight-stranded beta barrel, lipocalin family, structural joint center for structural genomics, JCSG; 1.95A {Bacteroides ovatus}

Probab=83.47  E-value=12  Score=32.42  Aligned_cols=72  Identities=15%  Similarity=0.178  Sum_probs=46.5

Q ss_pred             ccccccceeEEEE-EecccCcchhhhhhcCCCCCeeEEccCCceEEEEEecCCe-EEEEEEEEEEeCCcEEEEEEee
Q 016802          257 EERELLEGEWQML-WSSQMETDSWIENAGNGLMGKQIVKKNGQMKFEVDILLGF-KFSMTGTYAKSSTNTYNVTMDD  331 (382)
Q Consensus       257 ~~~~lL~G~W~L~-ySS~~e~~~~l~~~~~gl~~~Q~Id~~~~~~N~v~~~~~~-~~~v~a~~e~~s~~rv~V~F~~  331 (382)
                      -.+.-|.|.|+|. |.++....+.--+.   ...+-||.++|++.|++-..... -....++|+..|+..+.=..++
T Consensus         7 ~~~~~L~GvWQ~c~y~~~~~~~~~~l~~---s~~~KIlS~DgtF~N~~m~~~~~aiIt~yGtY~l~SD~~Y~E~i~k   80 (142)
T 4gzv_A            7 FKAADLKGIWQLCHYVSESPDVPGALKP---SNTFKVLSDDGRIVNFTIIPGADAIITGYGTYKQLTDDSYKESIEK   80 (142)
T ss_dssp             GGSCCCCEEEEEEEEEESSTTSCCEEEE---EEEEEEECTTSEEEEEECCTTSCCEEEEEEEEEEEETTEEEEEEEE
T ss_pred             cccccceEEeEEeeEeecCCCCCceEee---cCceEEECCCCcEEEEEEeCCCCcEEEEeEEEEecCCCeeeeeecc
Confidence            3456799999997 55554322111011   11378899999999998544333 3467889999998876554444

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00