Citrus Sinensis ID: 016852

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-
MALLYRLSFSSSSSPLSSACNSIKQFNPISPKSFICSLHFNDTSSSSSSSSPFTEKHSFERYQRDQWVYSSLQHNRPEPTSPSVSLDADSTRRNDIALQLPELKKLLQVLREKREEDRVGAEKCGPGNVYLVGTGPGDPDLLTLKAMKVIQKADLLLYDRLVSNDVLDLVAPNARLLYVGKTAGYHSRTQEEIHELLLSFAEVGATVVRLKGGDPLVFGRGGEEMDFLQQKGIQVKVIPGITAASGIAAELGIPLTHRGVANSVRFLTGHSRKGGTDPLFVAENAADPDSTLVVYMGLSTLPSLALKLMHHGLPPHTPAAAIERGTTPQQRIVFSELKDLADKIGVEELVSPTLIIIGKVVSLSPFWPISSKEATCLAEAK
cccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccccccHHHHHHHHHHHHccEEEEcccccHHHHHcccccccEEEcccccccccccHHHHHHHHHHHHHccccEEEccccccccccccHHHHHHHHHccccEEEEccccHHHHHHHHcccccccccccccEEEEccccccccccccccHHHHcccccEEEEEEccccHHHHHHHHHHccccccccEEEEEcccccccEEEEEEHHHHHHHHHHccccccEEEEEccccccccccccccccccHHHHcc
cEEEEEccccccccccccccccccccccccccccEEEEEcccHHHHHcccccccccccHHHHHHHHHHHEccccccccccccccccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccccHcHHHHHHHHHHHHccEEEEEccccHHHHHHHcccccEEEEccccccccccHHHHHHHHHHHHHcccEEEEEcccccEEEcccHHHHHHHHHccccEEEEcccHHHHHHHHHcccccccccHcccEEEEEcccccccccccccHHHHHccccEEEEEEccccHHHHHHHHHHccccccccEEEEEcccccccEEEEEcHHHHHHHHHHccccccEEEEEEHHHHHHHHHHHHHcccHHHHHcc
mallyrlsfsssssplssacnsikqfnpispksficslhfndtsssssssspftekhsferyqrdqwvysslqhnrpeptspsvsldadstrrndIALQLPELKKLLQVLREKReedrvgaekcgpgnvylvgtgpgdpdlLTLKAMKVIQKADLLLYDrlvsndvldlvapnarLLYVGktagyhsrtQEEIHELLLSFAEVGATVVRlkggdplvfgrggeemdFLQQKGiqvkvipgitaasgiaaelgiplthrgvANSVRFLtghsrkggtdplfvaenaadpdstLVVYMGLSTLPSLALKLmhhglpphtpaaaiergttpqqRIVFSELKDLADKigveelvsptLIIIGKvvslspfwpisskeatclaeak
mallyrlsfsssssplSSACNSIKQFNPISPKSFICSLHFNdtsssssssspfteKHSFERYQRDQWVYSSLqhnrpeptspsvsldadstRRNDIALQLPELKKLLQVLREKreedrvgaekcgpgnvylvgTGPGDPDLLTLKAMKVIQKADLLLYDRLVSNDVLDLVAPNARLLYVGKTAGYHSRTQEEIHELLLSFAEVGATVVRLKGGDPLVFGRGGEEMDFLQQKGIQVKVIPGITAASGIAAELGIPLTHRGVANSVRFLTGHSRKGGTDPLFVAENAADPDSTLVVYMGLSTLPSLALKLMHHGLPPHTPAAAIERGTTPQQRIVFSELKDLADKIGVEELVSPTLIIIGkvvslspfwpisskeatclaeak
MAllyrlsfsssssplssacnsIKQFNPISPKSFICSLHFNDTssssssssPFTEKHSFERYQRDQWVYSSLQHNRPEPTSPSVSLDADSTRRNDIALQLPELKKLLQVLREKREEDRVGAEKCGPGNVYLVGTGPGDPDLLTLKAMKVIQKADLLLYDRLVSNDVLDLVAPNARLLYVGKTAGYHSRTQEEIHELLLSFAEVGATVVRLKGGDPLVFGRGGEEMDFLQQKGIQVKVIPGITAASGIAAELGIPLTHRGVANSVRFLTGHSRKGGTDPLFVAENAADPDSTLVVYMGLSTLPSLALKLMHHGLPPHTPAAAIERGTTPQQRIVFSELKDLADKIGVEELVSPTLIIIGKVVSLSPFWPISSKEATCLAEAK
********************************SFICSLHF***************************************************************KKLLQVL**********AEKCGPGNVYLVGTGPGDPDLLTLKAMKVIQKADLLLYDRLVSNDVLDLVAPNARLLYVGKTAGYHSRTQEEIHELLLSFAEVGATVVRLKGGDPLVFGRGGEEMDFLQQKGIQVKVIPGITAASGIAAELGIPLTHRGVANSVRFLTGHSRKGGTDPLFVAENAADPDSTLVVYMGLSTLPSLALKLMHHGLPPHTPAAAIERGTTPQQRIVFSELKDLADKIGVEELVSPTLIIIGKVVSLSPFWPISS**********
****************************ISPKSFICSL***********************YQRDQWVYSSLQ************LDADSTRRNDIALQLPE*************************NVYLVGTGPGDPDLLTLKAMKVIQKADLLLYDRLVSNDVLDLVAPNARLLYVGKTAGYHSRTQEEIHELLLSFAEVGATVVRLKGGDPLVFGRGGEEMDFLQQKGIQVKVIPGITAASGIAAELGIPLTHRGVANSVRFLTGHSRKGGTDPLFVAENAADPDSTLVVYMGLSTLPSLALKLMHHGLPPHTPAAAIERGTTPQQRIVFSELKDLADKIGVEELVSPTLIIIGKVVSLSPFWPIS***********
********************NSIKQFNPISPKSFICSLHFN*****************FERYQRDQWVYSSLQ**************ADSTRRNDIALQLPELKKLLQVLRE********AEKCGPGNVYLVGTGPGDPDLLTLKAMKVIQKADLLLYDRLVSNDVLDLVAPNARLLYVGKTAGYHSRTQEEIHELLLSFAEVGATVVRLKGGDPLVFGRGGEEMDFLQQKGIQVKVIPGITAASGIAAELGIPLTHRGVANSVRFLTGHSRKGGTDPLFVAENAADPDSTLVVYMGLSTLPSLALKLMHHGLPPHTPAAAIERGTTPQQRIVFSELKDLADKIGVEELVSPTLIIIGKVVSLSPFWPISSKEATCLAEAK
*ALL***SFS****************NPISPKSFICSLHFND*****************ERYQRDQWVYSSL*****************STRRNDIALQLPELKKLLQVLREKREEDRVGAEKCGPGNVYLVGTGPGDPDLLTLKAMKVIQKADLLLYDRLVSNDVLDLVAPNARLLYVGKTAGYHSRTQEEIHELLLSFAEVGATVVRLKGGDPLVFGRGGEEMDFLQQKGIQVKVIPGITAASGIAAELGIPLTHRGVANSVRFLTGHSRKGGTDPLFVAENAADPDSTLVVYMGLSTLPSLALKLMHHGLPPHTPAAAIERGTTPQQRIVFSELKDLADKIGVEELVSPTLIIIGKVVSLSPFWPISSKEA*******
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
SSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MALLYRLSFSSSSSPLSSACNSIKQFNPISPKSFICSLHFNDTSSSSSSSSPFTEKHSFERYQRDQWVYSSLQHNRPEPTSPSVSLDADSTRRNDIALQLPELKKLLQVLREKREEDRVGAEKCGPGNVYLVGTGPGDPDLLTLKAMKVIQKADLLLYDRLVSNDVLDLVAPNARLLYVGKTAGYHSRTQEEIHELLLSFAEVGATVVRLKGGDPLVFGRGGEEMDFLQQKGIQVKVIPGITAASGIAAELGIPLTHRGVANSVRFLTGHSRKGGTDPLFVAENAADPDSTLVVYMGLSTLPSLALKLMHHGLPPHTPAAAIERGTTPQQRIVFSELKDLADKIGVEELVSPTLIIIGKVVSLSPFWPISSKEATCLAEAK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query381 2.2.26 [Sep-21-2011]
Q21K21458 Siroheme synthase OS=Sacc yes no 0.611 0.508 0.519 5e-63
C1DKY7464 Siroheme synthase OS=Azot yes no 0.635 0.521 0.508 8e-63
Q02NA3465 Siroheme synthase OS=Pseu yes no 0.656 0.537 0.5 9e-63
A6V4H6465 Siroheme synthase OS=Pseu yes no 0.656 0.537 0.503 2e-62
A4VLU6465 Siroheme synthase OS=Pseu yes no 0.648 0.531 0.501 3e-62
B7UW11465 Siroheme synthase OS=Pseu yes no 0.635 0.520 0.508 4e-62
Q9I0M7465 Siroheme synthase OS=Pseu yes no 0.635 0.520 0.508 4e-62
C3JY53464 Siroheme synthase OS=Pseu yes no 0.635 0.521 0.5 6e-62
Q6F8G6457 Siroheme synthase OS=Acin yes no 0.632 0.527 0.512 6e-62
A7MKK9457 Siroheme synthase 2 OS=Cr yes no 0.601 0.501 0.512 1e-61
>sp|Q21K21|CYSG_SACD2 Siroheme synthase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=cysG PE=3 SV=1 Back     alignment and function desciption
 Score =  241 bits (616), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 122/235 (51%), Positives = 166/235 (70%), Gaps = 2/235 (0%)

Query: 127 GNVYLVGTGPGDPDLLTLKAMKVIQKADLLLYDRLVSNDVLDLVAPNARLLYVGKTAGYH 186
           G VYLVG GPGDPDLLT KA++++Q+A+++LYDRLVS  +L++   +A  +YVGK    H
Sbjct: 216 GEVYLVGAGPGDPDLLTFKALRLMQQAEVVLYDRLVSEPILEMTRRDAERIYVGKKRAEH 275

Query: 187 SRTQEEIHELLLSFAEVGATVVRLKGGDPLVFGRGGEEMDFLQQKGIQVKVIPGITAASG 246
           +  Q++I+++LL  A+ G  V+RLKGGDP +FGRGGEE+D L +  I  +V+PGITAASG
Sbjct: 276 AVPQQKINQMLLELAQQGKRVLRLKGGDPFIFGRGGEEIDLLAEHKIPFQVVPGITAASG 335

Query: 247 IAAELGIPLTHRGVANSVRFLTGHSRKGGTDPLFVAENAADPDSTLVVYMGLSTLPSLAL 306
            A+  GIPLTHR  + SVRF+TGH ++G  +  F      D   TLV YMGL+ L ++  
Sbjct: 336 CASYSGIPLTHRDYSQSVRFITGHLQEGKEN--FRWSEFVDKQQTLVFYMGLAGLETICS 393

Query: 307 KLMHHGLPPHTPAAAIERGTTPQQRIVFSELKDLADKIGVEELVSPTLIIIGKVV 361
           KL+ +G  P TPAA IERGT P+QR+  S+L  LA KI   ++ +PTL+IIG VV
Sbjct: 394 KLIEYGKSPSTPAALIERGTLPEQRVHVSDLAGLAAKIEGLDVHAPTLLIIGDVV 448
Multifunctional enzyme that catalyzes the SAM-dependent methylation of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 and then position C-12 or C-18 to form trimethylpyrrocorphin 2. It also catalyzes the conversion of precorrin-2 into siroheme. This reaction consists of the NAD-dependent oxidation of precorrin-2 into sirohydrochlorin and its subsequent ferrochelation into siroheme.
Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) (taxid: 203122)
EC: 4EC: .EC: 9EC: 9EC: .EC: 1EC: .EC: 4
>sp|C1DKY7|CYSG_AZOVD Siroheme synthase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=cysG PE=3 SV=1 Back     alignment and function description
>sp|Q02NA3|CYSG_PSEAB Siroheme synthase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=cysG PE=3 SV=1 Back     alignment and function description
>sp|A6V4H6|CYSG_PSEA7 Siroheme synthase OS=Pseudomonas aeruginosa (strain PA7) GN=cysG PE=3 SV=1 Back     alignment and function description
>sp|A4VLU6|CYSG_PSEU5 Siroheme synthase OS=Pseudomonas stutzeri (strain A1501) GN=cysG PE=3 SV=2 Back     alignment and function description
>sp|B7UW11|CYSG_PSEA8 Siroheme synthase OS=Pseudomonas aeruginosa (strain LESB58) GN=cysG PE=3 SV=1 Back     alignment and function description
>sp|Q9I0M7|CYSG_PSEAE Siroheme synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=cysG PE=3 SV=1 Back     alignment and function description
>sp|C3JY53|CYSG_PSEFS Siroheme synthase OS=Pseudomonas fluorescens (strain SBW25) GN=cysG PE=3 SV=1 Back     alignment and function description
>sp|Q6F8G6|CYSG_ACIAD Siroheme synthase OS=Acinetobacter sp. (strain ADP1) GN=cysG PE=3 SV=1 Back     alignment and function description
>sp|A7MKK9|CYSG2_CROS8 Siroheme synthase 2 OS=Cronobacter sakazakii (strain ATCC BAA-894) GN=cysG2 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query381
224120852373 predicted protein [Populus trichocarpa] 0.960 0.981 0.738 1e-156
356555282410 PREDICTED: siroheme synthase-like [Glyci 0.947 0.880 0.740 1e-152
449436257372 PREDICTED: siroheme synthase-like [Cucum 0.952 0.975 0.757 1e-152
356525626363 PREDICTED: siroheme synthase-like [Glyci 0.871 0.914 0.806 1e-151
15237505369 urophorphyrin methylase 1 [Arabidopsis t 0.968 1.0 0.729 1e-149
1490606369 s-adenosyl-L-methionine-dependent uropor 0.968 1.0 0.721 1e-148
359487374381 PREDICTED: siroheme synthase-like [Vitis 0.858 0.858 0.798 1e-147
147765852382 hypothetical protein VITISV_000189 [Viti 0.858 0.856 0.798 1e-147
297805574368 hypothetical protein ARALYDRAFT_493893 [ 0.963 0.997 0.727 1e-142
255544328338 uroporphyrin-III methyltransferase, puta 0.834 0.940 0.748 1e-132
>gi|224120852|ref|XP_002330842.1| predicted protein [Populus trichocarpa] gi|222872664|gb|EEF09795.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 285/386 (73%), Positives = 326/386 (84%), Gaps = 20/386 (5%)

Query: 1   MALLYRLSFSSSSSPLSSACNSIKQF--NPISPKSFICSLHFNDTSSSSSSSSPFTEKHS 58
           MAL+Y+L   SS S  +   N +     NPI      CSLH+         SSPFTEKHS
Sbjct: 1   MALVYKLQAFSSFSVSAQNYNKVTSLITNPI------CSLHYK--------SSPFTEKHS 46

Query: 59  FERYQRDQWVYSS-LQHNRPEPTSPSVSLDADSTRRNDIALQLPELKKLLQVLREKREE- 116
            ERYQRD+W+Y S ++ ++ + +S S+  D++S R +DIALQLPELKKLL+VL+ KRE  
Sbjct: 47  IERYQRDRWLYQSQVELSQCQSSSCSLPSDSESIREDDIALQLPELKKLLEVLKRKRESC 106

Query: 117 --DRVGAEKCGPGNVYLVGTGPGDPDLLTLKAMKVIQKADLLLYDRLVSNDVLDLVAPNA 174
             +    EKCGPGNV+LVGTGPGDP+LLT+KA+KV+QKAD+LLYDRLVSNDVL+LV P+A
Sbjct: 107 CGNDGDGEKCGPGNVFLVGTGPGDPELLTVKAVKVVQKADILLYDRLVSNDVLELVGPDA 166

Query: 175 RLLYVGKTAGYHSRTQEEIHELLLSFAEVGATVVRLKGGDPLVFGRGGEEMDFLQQKGIQ 234
           RLLYVGKTAGYHSRTQEEIHELLLSFAE GATVVRLKGGDPLVFGRGGEEMDFLQQ+GIQ
Sbjct: 167 RLLYVGKTAGYHSRTQEEIHELLLSFAEAGATVVRLKGGDPLVFGRGGEEMDFLQQQGIQ 226

Query: 235 VKVIPGITAASGIAAELGIPLTHRGVANSVRFLTGHSRKGGTDPLFVAENAADPDSTLVV 294
           VKVIPGIT+ASGIAAELGIPLTHRGVANSVRFLTGHSR GGTDPLFVAE++ADPDSTLVV
Sbjct: 227 VKVIPGITSASGIAAELGIPLTHRGVANSVRFLTGHSRNGGTDPLFVAESSADPDSTLVV 286

Query: 295 YMGLSTLPSLALKLMHHGLPPHTPAAAIERGTTPQQRIVFSELKDLADKIGVEELVSPTL 354
           YMGLSTLP+LALKLM HGLP +TPAAA+ERGTTPQQR+VF+EL DLADK+  EELVSPTL
Sbjct: 287 YMGLSTLPALALKLMQHGLPANTPAAAVERGTTPQQRMVFAELNDLADKVAREELVSPTL 346

Query: 355 IIIGKVVSLSPFWPISSKEATCLAEA 380
           IIIGKVV+LSP WP+SSKEA+CL EA
Sbjct: 347 IIIGKVVALSPLWPLSSKEASCLMEA 372

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356555282|ref|XP_003545963.1| PREDICTED: siroheme synthase-like [Glycine max] Back     alignment and taxonomy information
>gi|449436257|ref|XP_004135909.1| PREDICTED: siroheme synthase-like [Cucumis sativus] gi|449489084|ref|XP_004158210.1| PREDICTED: siroheme synthase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356525626|ref|XP_003531425.1| PREDICTED: siroheme synthase-like [Glycine max] Back     alignment and taxonomy information
>gi|15237505|ref|NP_198901.1| urophorphyrin methylase 1 [Arabidopsis thaliana] gi|18087581|gb|AAL58921.1|AF462833_1 AT5g40850/MHK7_8 [Arabidopsis thaliana] gi|1146165|gb|AAB92676.1| urophorphyrin III methylase [Arabidopsis thaliana] gi|10177964|dbj|BAB11347.1| urophorphyrin III methylase [Arabidopsis thaliana] gi|16604390|gb|AAL24201.1| AT5g40850/MHK7_8 [Arabidopsis thaliana] gi|19310499|gb|AAL84983.1| AT5g40850/MHK7_8 [Arabidopsis thaliana] gi|22655404|gb|AAM98294.1| At5g40850/MHK7_8 [Arabidopsis thaliana] gi|332007223|gb|AED94606.1| urophorphyrin methylase 1 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|1490606|gb|AAB92677.1| s-adenosyl-L-methionine-dependent uroporphyrinogen III methyltransferase [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|359487374|ref|XP_003633580.1| PREDICTED: siroheme synthase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|147765852|emb|CAN62430.1| hypothetical protein VITISV_000189 [Vitis vinifera] Back     alignment and taxonomy information
>gi|297805574|ref|XP_002870671.1| hypothetical protein ARALYDRAFT_493893 [Arabidopsis lyrata subsp. lyrata] gi|297316507|gb|EFH46930.1| hypothetical protein ARALYDRAFT_493893 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|255544328|ref|XP_002513226.1| uroporphyrin-III methyltransferase, putative [Ricinus communis] gi|223547724|gb|EEF49217.1| uroporphyrin-III methyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query381
TAIR|locus:2164506369 UPM1 "AT5G40850" [Arabidopsis 0.900 0.929 0.757 6e-135
UNIPROTKB|P0AEA8457 cysG "CysG" [Escherichia coli 0.608 0.507 0.514 9.6e-57
TIGR_CMR|SPO_A0221257 SPO_A0221 "nitrite reductase h 0.637 0.945 0.471 2.9e-55
TIGR_CMR|BA_1445258 BA_1445 "uroporphyrin-III C-me 0.614 0.906 0.468 3.4e-54
UNIPROTKB|Q47WE4292 cobA2 "Uroporphyrin-III C-meth 0.635 0.828 0.452 1.5e-53
TIGR_CMR|CPS_4228292 CPS_4228 "uroporphyrin-III C-m 0.635 0.828 0.452 1.5e-53
TIGR_CMR|CHY_0778257 CHY_0778 "uroporphyrin-III C-m 0.619 0.918 0.464 2.1e-52
UNIPROTKB|Q9KP18299 VC_2561 "Uroporphyrin-III C-me 0.637 0.812 0.457 2.7e-52
TIGR_CMR|VC_2561299 VC_2561 "uroporphyrin-III C-me 0.637 0.812 0.457 2.7e-52
UNIPROTKB|Q8EB08276 cysG "Uroporphyrin-III C-methy 0.619 0.855 0.474 4.4e-52
TAIR|locus:2164506 UPM1 "AT5G40850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1322 (470.4 bits), Expect = 6.0e-135, P = 6.0e-135
 Identities = 263/347 (75%), Positives = 289/347 (83%)

Query:    35 ICSLHFNDTXXXXXXXXPFTEKHSFERYQRDQWVYSSLQHNRPEPTSPSVSLDADSTRRN 94
             IC LH+N          PFTEKHS ERYQRDQW+Y +++   P   SPS   D    R N
Sbjct:    27 ICCLHYN---TASSSSSPFTEKHSVERYQRDQWLYKAVEPTPPSTPSPSPFEDEVFVREN 83

Query:    95 DIALQLPELKKLLQVLREKREEDRVGAEKCGPGNVYLVGTGPGDPDLLTLKAMKVIQKAD 154
             DIA QLPELKKLL VL+EKR +   G + CGPG+VYLVGTGPGDP+LLTLKA++VIQ AD
Sbjct:    84 DIASQLPELKKLLAVLKEKRVKGCKGGD-CGPGDVYLVGTGPGDPELLTLKAVRVIQSAD 142

Query:   155 LLLYDRLVSNDVLDLVAPNARLLYVGKTAGYHSRTQEEIHELLLSFAEVGATVVRLKGGD 214
             LLLYDRLVSNDVL+LVAP+ARLLYVGKTAGYHSRTQEEIHELLL+FAE GATVVRLKGGD
Sbjct:   143 LLLYDRLVSNDVLELVAPDARLLYVGKTAGYHSRTQEEIHELLLNFAEAGATVVRLKGGD 202

Query:   215 PLVFGRGGEEMDFLQQKGIQVKVIPGITAASGIAAELGIPLTHRGVANSVRFLTGHSRKG 274
             PLVFGRGGEEMDFLQQ+GI+V+VIPGITAASGIAAELGIPLTHRGVA SVRFLTGHSRKG
Sbjct:   203 PLVFGRGGEEMDFLQQQGIRVQVIPGITAASGIAAELGIPLTHRGVATSVRFLTGHSRKG 262

Query:   275 GTDPLFVAENAADPDSTLVVYMGLSTLPSLALKLMHHGLPPHTPAAAIERGTTPQQRIVF 334
             GTDPLFVAENAADPD+TLVVYMGL TLPSLA KLM HGLP  TPA A+ERGTTP QR VF
Sbjct:   263 GTDPLFVAENAADPDTTLVVYMGLGTLPSLAQKLMDHGLPSDTPAVAVERGTTPLQRTVF 322

Query:   335 SELKDLADKIGVEELVSPTLIIIGKVVSLSPFWPISSKEATCLAEAK 381
             +ELKD A +I    LVSPTLIIIGKVV LSP WP  +KE++CL E +
Sbjct:   323 AELKDFATEIQSAGLVSPTLIIIGKVVELSPLWPHCTKESSCLVETR 369
GO:0004851 "uroporphyrin-III C-methyltransferase activity" evidence=ISS;IDA
GO:0006779 "porphyrin-containing compound biosynthetic process" evidence=IEA;ISS
GO:0008152 "metabolic process" evidence=IEA
GO:0008168 "methyltransferase activity" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM;IDA
GO:0043115 "precorrin-2 dehydrogenase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0006567 "threonine catabolic process" evidence=RCA
GO:0019354 "siroheme biosynthetic process" evidence=IDA
UNIPROTKB|P0AEA8 cysG "CysG" [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|SPO_A0221 SPO_A0221 "nitrite reductase heme biosynthesis E protein" [Ruegeria pomeroyi DSS-3 (taxid:246200)] Back     alignment and assigned GO terms
TIGR_CMR|BA_1445 BA_1445 "uroporphyrin-III C-methyltransferase" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
UNIPROTKB|Q47WE4 cobA2 "Uroporphyrin-III C-methyltransferase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_4228 CPS_4228 "uroporphyrin-III C-methyltransferase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
TIGR_CMR|CHY_0778 CHY_0778 "uroporphyrin-III C-methyltransferase" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KP18 VC_2561 "Uroporphyrin-III C-methyltransferase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_2561 VC_2561 "uroporphyrin-III C-methyltransferase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
UNIPROTKB|Q8EB08 cysG "Uroporphyrin-III C-methyltransferase CysG" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer4.99.1LOW CONFIDENCE prediction!
3rd Layer2.1.10.766
4th Layer4.99.1.40.824
3rd Layer1.3.10.766
4th Layer2.1.1.1070.824
3rd Layer1.3.1.760.824

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query381
PLN02625263 PLN02625, PLN02625, uroporphyrin-III C-methyltrans 1e-159
cd11642233 cd11642, SUMT, Uroporphyrin-III C-methyltransferas 1e-128
PRK06136249 PRK06136, PRK06136, uroporphyrin-III C-methyltrans 1e-114
TIGR01469236 TIGR01469, cobA_cysG_Cterm, uroporphyrin-III C-met 1e-109
COG0007244 COG0007, CysG, Uroporphyrinogen-III methylase [Coe 1e-109
PRK10637457 PRK10637, cysG, siroheme synthase; Provisional 4e-87
PRK07168 474 PRK07168, PRK07168, bifunctional uroporphyrinogen- 6e-60
cd11641228 cd11641, Precorrin-4_C11-MT, Precorrin-4 C11-methy 2e-54
pfam00590202 pfam00590, TP_methylase, Tetrapyrrole (Corrin/Porp 5e-51
COG2875254 COG2875, CobM, Precorrin-4 methylase [Coenzyme met 3e-49
cd09815224 cd09815, TP_methylase, S-AdoMet dependent tetrapyr 1e-46
TIGR01465247 TIGR01465, cobM_cbiF, precorrin-4 C11-methyltransf 1e-46
cd11724255 cd11724, TP_methylase_like, Uncharacterized subfam 4e-30
PRK15473257 PRK15473, cbiF, cobalt-precorrin-4 C(11)-methyltra 6e-30
cd11645226 cd11645, Precorrin_2_C20_MT, Precorrin-2 C20-methy 9e-23
TIGR01467230 TIGR01467, cobI_cbiL, precorrin-2 C20-methyltransf 4e-21
cd11646240 cd11646, Precorrin_3B_C17_MT, Precorrin-3B C(17)-m 8e-21
COG1010249 COG1010, CobJ, Precorrin-3B methylase [Coenzyme me 2e-19
COG2243234 COG2243, CobF, Precorrin-2 methylase [Coenzyme met 5e-19
PRK05765246 PRK05765, PRK05765, precorrin-3B C17-methyltransfe 2e-17
cd11644201 cd11644, Precorrin-6Y-methylase, Precorrin-6Y meth 2e-17
TIGR01466239 TIGR01466, cobJ_cbiH, precorrin-3B C17-methyltrans 3e-17
PRK05576229 PRK05576, PRK05576, cobalt-precorrin-2 C(20)-methy 2e-15
PRK05990241 PRK05990, PRK05990, precorrin-2 C(20)-methyltransf 1e-14
PRK05787210 PRK05787, PRK05787, cobalt-precorrin-6Y C(5)-methy 3e-14
COG2241210 COG2241, CobL, Precorrin-6B methylase 1 [Coenzyme 2e-13
TIGR02467204 TIGR02467, CbiE, precorrin-6y C5,15-methyltransfer 3e-11
cd11643247 cd11643, Precorrin-6A-synthase, Precorrin-6A synth 1e-10
TIGR02434249 TIGR02434, CobF, precorrin-6A synthase (deacetylat 5e-09
PRK05991250 PRK05991, PRK05991, precorrin-3B C17-methyltransfe 1e-08
PRK08284253 PRK08284, PRK08284, precorrin 6A synthase; Provisi 4e-08
PRK15478241 PRK15478, cbiH, cobalt-precorrin-3B C(17)-methyltr 4e-08
cd11647241 cd11647, Diphthine_synthase, Diphthine synthase, a 3e-06
PRK04160258 PRK04160, PRK04160, diphthine synthase; Provisiona 5e-06
COG1798260 COG1798, DPH5, Diphthamide biosynthesis methyltran 1e-05
PRK05948238 PRK05948, PRK05948, precorrin-2 methyltransferase; 1e-05
TIGR00522257 TIGR00522, dph5, diphthine synthase 6e-04
>gnl|CDD|178232 PLN02625, PLN02625, uroporphyrin-III C-methyltransferase Back     alignment and domain information 
 Score =  447 bits (1151), Expect = e-159
 Identities = 195/281 (69%), Positives = 226/281 (80%), Gaps = 20/281 (7%)

Query: 94  NDIALQLPELKKLLQVLREKREEDRVGAEKCGPGNVYLVGTGPGDPDLLTLKAMKVIQKA 153
           NDIA QLPEL+                    GPGNV+LVGTGPGDPDLLTLKA++++Q A
Sbjct: 2   NDIASQLPELE--------------------GPGNVFLVGTGPGDPDLLTLKALRLLQTA 41

Query: 154 DLLLYDRLVSNDVLDLVAPNARLLYVGKTAGYHSRTQEEIHELLLSFAEVGATVVRLKGG 213
           D++LYDRLVS D+LDLV P A LLYVGK  GYHSRTQEEIHELLLSFAE G TVVRLKGG
Sbjct: 42  DVVLYDRLVSPDILDLVPPGAELLYVGKRGGYHSRTQEEIHELLLSFAEAGKTVVRLKGG 101

Query: 214 DPLVFGRGGEEMDFLQQKGIQVKVIPGITAASGIAAELGIPLTHRGVANSVRFLTGHSRK 273
           DPLVFGRGGEEMD L++ GI V V+PGITAA G  AELGIPLTHRGVA SVRFLTGH R+
Sbjct: 102 DPLVFGRGGEEMDALRKNGIPVTVVPGITAAIGAPAELGIPLTHRGVATSVRFLTGHDRE 161

Query: 274 GGTDPLFVAENAADPDSTLVVYMGLSTLPSLALKLMHHGLPPHTPAAAIERGTTPQQRIV 333
           GGTDPL VAE AADPD+TLVVYMGL TLPSLA KL+  GLPP TPAAA+ERGTTP+QR+V
Sbjct: 162 GGTDPLDVAEAAADPDTTLVVYMGLGTLPSLAEKLIAAGLPPDTPAAAVERGTTPEQRVV 221

Query: 334 FSELKDLADKIGVEELVSPTLIIIGKVVSLSPFWPISSKEA 374
           F  L+D+A+ +    LVSPT+I++G+VV+LSP WP +++E+
Sbjct: 222 FGTLEDIAEDVAAAGLVSPTVIVVGEVVALSPLWPWAAEES 262

Length = 263
>gnl|CDD|212501 cd11642, SUMT, Uroporphyrin-III C-methyltransferase (S-Adenosyl-L-methionine:uroporphyrinogen III methyltransferase, SUMT) Back     alignment and domain information
>gnl|CDD|235711 PRK06136, PRK06136, uroporphyrin-III C-methyltransferase; Reviewed Back     alignment and domain information
>gnl|CDD|233426 TIGR01469, cobA_cysG_Cterm, uroporphyrin-III C-methyltransferase Back     alignment and domain information
>gnl|CDD|223086 COG0007, CysG, Uroporphyrinogen-III methylase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|182606 PRK10637, cysG, siroheme synthase; Provisional Back     alignment and domain information
>gnl|CDD|180864 PRK07168, PRK07168, bifunctional uroporphyrinogen-III methyltransferase/uroporphyrinogen-III synthase; Reviewed Back     alignment and domain information
>gnl|CDD|212500 cd11641, Precorrin-4_C11-MT, Precorrin-4 C11-methyltransferase (CbiF/CobM) Back     alignment and domain information
>gnl|CDD|216012 pfam00590, TP_methylase, Tetrapyrrole (Corrin/Porphyrin) Methylases Back     alignment and domain information
>gnl|CDD|225430 COG2875, CobM, Precorrin-4 methylase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|212499 cd09815, TP_methylase, S-AdoMet dependent tetrapyrrole methylases Back     alignment and domain information
>gnl|CDD|200107 TIGR01465, cobM_cbiF, precorrin-4 C11-methyltransferase Back     alignment and domain information
>gnl|CDD|212510 cd11724, TP_methylase_like, Uncharacterized subfamily of S-AdoMet dependent tetrapyrrole methylases Back     alignment and domain information
>gnl|CDD|185370 PRK15473, cbiF, cobalt-precorrin-4 C(11)-methyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|212504 cd11645, Precorrin_2_C20_MT, Precorrin-2 C20-methyltransferase, also named CobI or CbiL Back     alignment and domain information
>gnl|CDD|233425 TIGR01467, cobI_cbiL, precorrin-2 C20-methyltransferase Back     alignment and domain information
>gnl|CDD|212505 cd11646, Precorrin_3B_C17_MT, Precorrin-3B C(17)-methyltransferase (CobJ/CbiH) Back     alignment and domain information
>gnl|CDD|223942 COG1010, CobJ, Precorrin-3B methylase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|225152 COG2243, CobF, Precorrin-2 methylase [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|235597 PRK05765, PRK05765, precorrin-3B C17-methyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|212503 cd11644, Precorrin-6Y-methylase, Precorrin-6Y methyltransferase, the cobalamin biosynthesis enzyme CbiE Back     alignment and domain information
>gnl|CDD|233424 TIGR01466, cobJ_cbiH, precorrin-3B C17-methyltransferase Back     alignment and domain information
>gnl|CDD|235512 PRK05576, PRK05576, cobalt-precorrin-2 C(20)-methyltransferase; Validated Back     alignment and domain information
>gnl|CDD|180341 PRK05990, PRK05990, precorrin-2 C(20)-methyltransferase; Reviewed Back     alignment and domain information
>gnl|CDD|235609 PRK05787, PRK05787, cobalt-precorrin-6Y C(5)-methyltransferase; Validated Back     alignment and domain information
>gnl|CDD|225150 COG2241, CobL, Precorrin-6B methylase 1 [Coenzyme metabolism] Back     alignment and domain information
>gnl|CDD|233878 TIGR02467, CbiE, precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit Back     alignment and domain information
>gnl|CDD|212502 cd11643, Precorrin-6A-synthase, Precorrin-6A synthase, the cobalamin biosynthesis enzyme CobF Back     alignment and domain information
>gnl|CDD|131487 TIGR02434, CobF, precorrin-6A synthase (deacetylating) Back     alignment and domain information
>gnl|CDD|180342 PRK05991, PRK05991, precorrin-3B C17-methyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|236218 PRK08284, PRK08284, precorrin 6A synthase; Provisional Back     alignment and domain information
>gnl|CDD|185375 PRK15478, cbiH, cobalt-precorrin-3B C(17)-methyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|212506 cd11647, Diphthine_synthase, Diphthine synthase, also known as DPH5 Back     alignment and domain information
>gnl|CDD|235231 PRK04160, PRK04160, diphthine synthase; Provisional Back     alignment and domain information
>gnl|CDD|224711 COG1798, DPH5, Diphthamide biosynthesis methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>gnl|CDD|180320 PRK05948, PRK05948, precorrin-2 methyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|233007 TIGR00522, dph5, diphthine synthase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 381
KOG1527506 consensus Uroporphyrin III methyltransferase [Coen 100.0
COG0007244 CysG Uroporphyrinogen-III methylase [Coenzyme meta 100.0
PLN02625263 uroporphyrin-III C-methyltransferase 100.0
PRK06136249 uroporphyrin-III C-methyltransferase; Reviewed 100.0
PRK07168 474 bifunctional uroporphyrinogen-III methyltransferas 100.0
TIGR01469236 cobA_cysG_Cterm uroporphyrin-III C-methyltransfera 100.0
PRK15473257 cbiF cobalt-precorrin-4 C(11)-methyltransferase; P 100.0
PRK10637457 cysG siroheme synthase; Provisional 100.0
COG2875254 CobM Precorrin-4 methylase [Coenzyme metabolism] 100.0
TIGR01465229 cobM_cbiF precorrin-4 C11-methyltransferase. This 100.0
TIGR00522257 dph5 diphthine synthase. This protein participates 100.0
PRK05787210 cobalt-precorrin-6Y C(5)-methyltransferase; Valida 100.0
PRK15478241 cbiH cobalt-precorrin-3B C(17)-methyltransferase; 100.0
PF00590210 TP_methylase: Tetrapyrrole (Corrin/Porphyrin) Meth 100.0
PRK05948238 precorrin-2 methyltransferase; Provisional 100.0
PRK05765246 precorrin-3B C17-methyltransferase; Provisional 100.0
TIGR01466239 cobJ_cbiH precorrin-3B C17-methyltransferase. This 100.0
COG2241210 CobL Precorrin-6B methylase 1 [Coenzyme metabolism 100.0
TIGR01467230 cobI_cbiL precorrin-2 C20-methyltransferase. This 100.0
PRK05576229 cobalt-precorrin-2 C(20)-methyltransferase; Valida 100.0
PRK05990241 precorrin-2 C(20)-methyltransferase; Reviewed 100.0
TIGR02467204 CbiE precorrin-6y C5,15-methyltransferase (decarbo 100.0
PTZ00175270 diphthine synthase; Provisional 100.0
PRK05991250 precorrin-3B C17-methyltransferase; Provisional 100.0
PRK14994287 SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O- 100.0
COG1010249 CobJ Precorrin-3B methylase [Coenzyme metabolism] 100.0
PRK04160258 diphthine synthase; Provisional 100.0
COG2243234 CobF Precorrin-2 methylase [Coenzyme metabolism] 99.98
PRK08284253 precorrin 6A synthase; Provisional 99.97
TIGR02434249 CobF precorrin-6A synthase (deacetylating). This m 99.97
COG0313275 Predicted methyltransferases [General function pre 99.92
COG1798260 DPH5 Diphthamide biosynthesis methyltransferase [T 99.91
TIGR00096276 probable S-adenosylmethionine-dependent methyltran 99.89
KOG3123272 consensus Diphthine synthase [Translation, ribosom 99.79
COG3956 488 Protein containing tetrapyrrole methyltransferase 99.57
TIGR01921324 DAP-DH diaminopimelate dehydrogenase. This model r 82.28
>KOG1527 consensus Uroporphyrin III methyltransferase [Coenzyme transport and metabolism] Back     alignment and domain information 
Probab=100.00  E-value=1.9e-61  Score=463.06  Aligned_cols=370  Identities=55%  Similarity=0.856  Sum_probs=332.6

Q ss_pred             CcccccccccccCCCC------cccccccc-----ccCCCCCCcceeeeecCCCCCCCCCCCCCccchhhhHhh------
Q 016852            1 MALLYRLSFSSSSSPL------SSACNSIK-----QFNPISPKSFICSLHFNDTSSSSSSSSPFTEKHSFERYQ------   63 (381)
Q Consensus         1 ~~~~~~~~~~~~~~~~------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------   63 (381)
                      |++++|||++++-.+.      -.+|++.+     ++||      +|++++|.--..++|+.||||++++|||+      
T Consensus       105 ~c~~~RIPin~~~~pe~~sfnli~tW~~p~lqisl~t~~------ngc~lanri~r~~~SslP~~~~e~ver~gk~r~in  178 (506)
T KOG1527|consen  105 MCLVQRIPINSSDSPEFCSFNLIRTWQQPRLQISLNTTP------NGCLLANRIKRASSSSLPFTEKESVERYGKDRAIN  178 (506)
T ss_pred             HHHheeecccccCCcccccccccccccCCceeeeeecCC------ceeeehhhhhhhhhccCCCCchHHHHHhccccccc
Confidence            6889999988774432      23566665     4555      99999984444456789999999999999      


Q ss_pred             ----hhhhhhccccCCCCCCCCCCccccc-cccc--------ccccccCHHHHHHHHHHHHHhhhhcccCCCC--CCCCE
Q 016852           64 ----RDQWVYSSLQHNRPEPTSPSVSLDA-DSTR--------RNDIALQLPELKKLLQVLREKREEDRVGAEK--CGPGN  128 (381)
Q Consensus        64 ----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~el~~~l~~~~~~~~~~~~~~~~--~~~g~  128 (381)
                          ||||+|+..+..++ ++-...|+++ ..+|        +++.+.++|++++.|+..+++++++-..++.  ...|.
T Consensus       179 e~per~QWl~~~~e~~P~-~kls~~~~eD~~~v~s~n~k~~~e~~~~s~lp~~~e~l~~~~~k~~l~~~~~e~gP~k~G~  257 (506)
T KOG1527|consen  179 EDPERDQWLYKAVEPTPP-SKLSPSPFEDEVFVRSDNFKLKLENDIASQLPELKELLAVLKEKRVLGCKGGECGPHKLGD  257 (506)
T ss_pred             CChhHHHHHHhhccCCCc-ccCCCCcccceeeeecCccccccccchhccCccHHHHHHhhhhcccccccCcccCccccCc
Confidence                99999999998888 6777788877 6688        8999999999999999999999987433322  23499


Q ss_pred             EEEEecCCCCcccchHHHHHHHHhcCEEEEcCCCCHHHHhhhCCCceEEEeccccCCCCCCHHHHHHHHHHHHHcCCeEE
Q 016852          129 VYLVGTGPGDPDLLTLKAMKVIQKADLLLYDRLVSNDVLDLVAPNARLLYVGKTAGYHSRTQEEIHELLLSFAEVGATVV  208 (381)
Q Consensus       129 l~lVGiGPGd~elLTlkA~~aL~~ADvVi~~~~~~~~ll~~l~~~~e~i~~~~~~~~~~~~~eei~~~i~~~~~~Gk~Vv  208 (381)
                      ||+||.|||+|++||++|++.|+.||+|++++.+.+.++++++++.+.++.+|..+++++.++|+.+.+.+.+..|..||
T Consensus       258 i~LvGsGPGsp~lLT~~A~~~I~sAD~~LaDkLVp~avL~Lipp~t~lfia~KfpGna~raQ~Elh~~~l~~l~~G~~VV  337 (506)
T KOG1527|consen  258 IYLVGSGPGSPELLTLKAVRVIQSADLLLADKLVPNAVLELIPPDTRLFIAGKFPGNASRAQEELHELLLNFLEAGATVV  337 (506)
T ss_pred             EEEEccCCCChhheeHHHHHHHhhcceehhhhcccHHHHhhcCCCCceEEeecCCCchhHHHHHHHHHHHHHHhCCCEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEecCCCCCcCCHHHHHHHHHhCCCcEEEEcCchHHHHHHHhcCCCCccCcccceeEEecCCCCCCCCChHHHHHHhcCC
Q 016852          209 RLKGGDPLVFGRGGEEMDFLQQKGIQVKVIPGITAASGIAAELGIPLTHRGVANSVRFLTGHSRKGGTDPLFVAENAADP  288 (381)
Q Consensus       209 vL~sGDP~~ys~~~~l~~~l~~~gi~veVIPGISS~~aaaA~lGipl~~~~~~~~v~ivs~hgr~~~~~~~~l~~~l~~~  288 (381)
                      +|+.|||++||+|++++.++++.|+..+|||||||..++++.+|||+++++....+.|+++|||++....    .....+
T Consensus       338 RLKqGDPyifGRGGEE~~Ff~qhGy~p~ViPGIssal~~~~~agIP~ThRgvAdqvl~cTGtgrKG~~p~----ip~fvp  413 (506)
T KOG1527|consen  338 RLKQGDPYIFGRGGEEMDFFQQHGYRPQVIPGISSALGIAAEAGIPLTHRGVADQVLFCTGTGRKGGTPA----IPAFVP  413 (506)
T ss_pred             EecCCCceeecCCchhhhhHHhCCceeEeccchhhhhhhhHhcCCCcccccccceEEEEeccCCCCCCCC----ccccCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999876431    123446


Q ss_pred             CCcEEEEcCCCCHHHHHHHHHHCCCCCCceeeeEecCCCCCcEEEEEehhhHHHhhccCCCCCcEEEEEcCccccCCCCc
Q 016852          289 DSTLVVYMGLSTLPSLALKLMHHGLPPHTPAAAIERGTTPQQRIVFSELKDLADKIGVEELVSPTLIIIGKVVSLSPFWP  368 (381)
Q Consensus       289 ~~tlVIl~~~~~~~~Ia~~L~~~G~~~~t~v~v~e~lg~~dErI~~~tL~eL~~~l~~~~~~~~~viiIg~~~~~~~~~~  368 (381)
                      ..|.|+||..+++.-+++.|+++||+.++|++++||.++|+||+++.+|+++.+.+...+..+|.++|+|++++..+.|+
T Consensus       414 ~~TtVflMaLhrl~~L~q~L~~hGwp~d~Pa~ivERgscPdQR~vf~~Lkdv~ee~~~~gs~pPglliiGk~vn~l~~~~  493 (506)
T KOG1527|consen  414 DTTTVFLMALHRLPSLAQKLMDHGWPSDTPAVIVERGSCPDQRTVFAELKDVAEEIQSAGSVPPGLLIIGKVVNLLPLWP  493 (506)
T ss_pred             CceeEeeehhcchHHHHHHHHhcCCCCCCCeeeEeccCCchHHHHHHHHHHHHHHHHhccCCCCcEEEEeeeeccccccc
Confidence            78999999999999999999999999999999999999999999999999999988888899999999999999999999


Q ss_pred             cchhhhhhhhhcC
Q 016852          369 ISSKEATCLAEAK  381 (381)
Q Consensus       369 ~~~~~~~~~~~~~  381 (381)
                      ...|+.||++|.+
T Consensus       494 ~~~~~~s~~~~~~  506 (506)
T KOG1527|consen  494 HCTKESSCLVETR  506 (506)
T ss_pred             ccCcccceeeecC
Confidence            9999999999864

>COG0007 CysG Uroporphyrinogen-III methylase [Coenzyme metabolism] Back     alignment and domain information
>PLN02625 uroporphyrin-III C-methyltransferase Back     alignment and domain information
>PRK06136 uroporphyrin-III C-methyltransferase; Reviewed Back     alignment and domain information
>PRK07168 bifunctional uroporphyrinogen-III methyltransferase/uroporphyrinogen-III synthase; Reviewed Back     alignment and domain information
>TIGR01469 cobA_cysG_Cterm uroporphyrin-III C-methyltransferase Back     alignment and domain information
>PRK15473 cbiF cobalt-precorrin-4 C(11)-methyltransferase; Provisional Back     alignment and domain information
>PRK10637 cysG siroheme synthase; Provisional Back     alignment and domain information
>COG2875 CobM Precorrin-4 methylase [Coenzyme metabolism] Back     alignment and domain information
>TIGR01465 cobM_cbiF precorrin-4 C11-methyltransferase Back     alignment and domain information
>TIGR00522 dph5 diphthine synthase Back     alignment and domain information
>PRK05787 cobalt-precorrin-6Y C(5)-methyltransferase; Validated Back     alignment and domain information
>PRK15478 cbiH cobalt-precorrin-3B C(17)-methyltransferase; Provisional Back     alignment and domain information
>PF00590 TP_methylase: Tetrapyrrole (Corrin/Porphyrin) Methylases Note this Prosite entry does not include all members of this family Back     alignment and domain information
>PRK05948 precorrin-2 methyltransferase; Provisional Back     alignment and domain information
>PRK05765 precorrin-3B C17-methyltransferase; Provisional Back     alignment and domain information
>TIGR01466 cobJ_cbiH precorrin-3B C17-methyltransferase Back     alignment and domain information
>COG2241 CobL Precorrin-6B methylase 1 [Coenzyme metabolism] Back     alignment and domain information
>TIGR01467 cobI_cbiL precorrin-2 C20-methyltransferase Back     alignment and domain information
>PRK05576 cobalt-precorrin-2 C(20)-methyltransferase; Validated Back     alignment and domain information
>PRK05990 precorrin-2 C(20)-methyltransferase; Reviewed Back     alignment and domain information
>TIGR02467 CbiE precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit Back     alignment and domain information
>PTZ00175 diphthine synthase; Provisional Back     alignment and domain information
>PRK05991 precorrin-3B C17-methyltransferase; Provisional Back     alignment and domain information
>PRK14994 SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional Back     alignment and domain information
>COG1010 CobJ Precorrin-3B methylase [Coenzyme metabolism] Back     alignment and domain information
>PRK04160 diphthine synthase; Provisional Back     alignment and domain information
>COG2243 CobF Precorrin-2 methylase [Coenzyme metabolism] Back     alignment and domain information
>PRK08284 precorrin 6A synthase; Provisional Back     alignment and domain information
>TIGR02434 CobF precorrin-6A synthase (deacetylating) Back     alignment and domain information
>COG0313 Predicted methyltransferases [General function prediction only] Back     alignment and domain information
>COG1798 DPH5 Diphthamide biosynthesis methyltransferase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>TIGR00096 probable S-adenosylmethionine-dependent methyltransferase, YraL family Back     alignment and domain information
>KOG3123 consensus Diphthine synthase [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain [General function prediction only] Back     alignment and domain information
>TIGR01921 DAP-DH diaminopimelate dehydrogenase Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query381
1pjq_A457 Structure And Function Of Cysg, The Multifunctional 9e-60
1pjt_A457 The Structure Of The Ser128ala Point-mutant Variant 9e-60
2ybo_A294 The X-Ray Structure Of The Sam-Dependent Uroporphyr 1e-54
2ybq_A292 The X-Ray Structure Of The Sam-Dependent Uroporphyr 1e-54
1s4d_A280 Crystal Structure Analysis Of The S-adenosyl-l-meth 2e-41
1ve2_A235 Crystal Structure Of Uroporphyrin-Iii-C-Methyltrans 6e-39
1v9a_A239 Crystal Structure Of Uroporphyrin-Iii C-Methyl Tran 6e-34
1cbf_A285 The X-ray Structure Of A Cobalamin Biosynthetic Enz 5e-24
2cbf_A234 The X-Ray Structure Of A Cobalamin Biosynthetic Enz 5e-24
4e16_A253 Precorrin-4 C(11)-Methyltransferase From Clostridiu 5e-20
3ndc_A264 Crystal Structure Of Precorrin-4 C11-Methyltransfer 1e-14
3nei_A281 Crystal Structure Of Precorrin-4 C11-Methyltransfer 1e-14
2zvb_A295 Crystal Structure Of Tt0207 From Thermus Thermophil 3e-07
2npn_A251 Crystal Structure Of Putative Cobalamin Synthesis R 9e-04
>pdb|1PJQ|A Chain A, Structure And Function Of Cysg, The Multifunctional MethyltransferaseDEHYDROGENASEFERROCHELATASE FOR Siroheme Synthesis Length = 457 Back     alignment and structure 
Iteration: 1

 Score =  227 bits (578), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 120/237 (50%), Positives = 160/237 (67%), Gaps = 5/237 (2%)
Query: 127 GNVYLVGTGPGDPDLLTLKAMKVIQKADLLLYDRLVSNDVLDLVAPNARLLYVGKTAGYH 186
           G V LVG GPGD  LLTLK ++ IQ+AD+++YDRLVS+D+++LV  +A  ++VGK AGYH
Sbjct: 216 GEVVLVGAGPGDAGLLTLKGLQQIQQADIVVYDRLVSDDIMNLVRRDADRVFVGKRAGYH 275
Query: 187 SRTQEEIHELLLSFAEVGATVVRLKGGDPLVFGRGGEEMDFLQQKGIQVKVIPGITAASG 246
              QEEI+++LL  A+ G  VVRLKGGDP +FGRGGEE++ L   GI   V+PGITAASG
Sbjct: 276 CVPQEEINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCHAGIPFSVVPGITAASG 335
Query: 247 IAAELGIPLTHRGVANSVRFLTGHSRKGGTDPLFVAENAADPDSTLVVYMGLSTLPSLAL 306
            +A  GIPLTHR  A SVR +TGH + GG       EN A    TLV YMGL+   ++  
Sbjct: 336 CSAYSGIPLTHRDYAQSVRLVTGHLKTGGE---LDWENLAAEKQTLVFYMGLNQAATIQE 392
Query: 307 KLMHHGLPPHTPAAAIERGTTPQQRIVFSELKDLADKIGVEELVSPTLIIIGKVVSL 363
           KL+  G+    P A +E GT+ +QR+V   L  L +    +++ SP LII+G+VV+L
Sbjct: 393 KLIAFGMQADMPVALVENGTSVKQRVVHGVLTQLGEL--AQQVESPALIIVGRVVAL 447
>pdb|1PJT|A Chain A, The Structure Of The Ser128ala Point-mutant Variant Of Cysg, The Multifunctional Methyltransferase/dehydrogenase/ferrochelatase For Siroheme Synthesis Length = 457 Back     alignment and structure
>pdb|2YBO|A Chain A, The X-Ray Structure Of The Sam-Dependent Uroporphyrinogen Iii Methyltransferase Nire From Pseudomonas Aeruginosa In Complex With Sah Length = 294 Back     alignment and structure
>pdb|2YBQ|A Chain A, The X-Ray Structure Of The Sam-Dependent Uroporphyrinogen Iii Methyltransferase Nire From Pseudomonas Aeruginosa In Complex With Sah And Uroporphyrinogen Iii Length = 292 Back     alignment and structure
>pdb|1S4D|A Chain A, Crystal Structure Analysis Of The S-adenosyl-l-methionine Dependent Uroporphyrinogen-iii C-methyltransferase Sumt Length = 280 Back     alignment and structure
>pdb|1VE2|A Chain A, Crystal Structure Of Uroporphyrin-Iii-C-Methyltransferase From Thermus Thermophilus Length = 235 Back     alignment and structure
>pdb|1V9A|A Chain A, Crystal Structure Of Uroporphyrin-Iii C-Methyl Transferase From Thermus Thermophilus Complexed With S-Adenyl Homocysteine Length = 239 Back     alignment and structure
>pdb|1CBF|A Chain A, The X-ray Structure Of A Cobalamin Biosynthetic Enzyme, Cobalt Precorrin-4 Methyltransferase, Cbif Length = 285 Back     alignment and structure
>pdb|2CBF|A Chain A, The X-Ray Structure Of A Cobalamin Biosynthetic Enzyme, Cobalt Precorrin-4 Methyltransferase, Cbif, From Bacillus Megaterium, With The His-Tag Cleaved Off Length = 234 Back     alignment and structure
>pdb|4E16|A Chain A, Precorrin-4 C(11)-Methyltransferase From Clostridium Difficile Length = 253 Back     alignment and structure
>pdb|3NDC|A Chain A, Crystal Structure Of Precorrin-4 C11-Methyltransferase From Rhodobacter Capsulatus Length = 264 Back     alignment and structure
>pdb|3NEI|A Chain A, Crystal Structure Of Precorrin-4 C11-Methyltransferase From Rhodobacter Capsulatus (No Sah Bound) Length = 281 Back     alignment and structure
>pdb|2ZVB|A Chain A, Crystal Structure Of Tt0207 From Thermus Thermophilus Hb8 Length = 295 Back     alignment and structure
>pdb|2NPN|A Chain A, Crystal Structure Of Putative Cobalamin Synthesis Related Protein (Cobf) From Corynebacterium Diphtheriae Length = 251 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query381
2ybo_A294 Methyltransferase; SUMT, NIRE, heme D1 biosynthesi 1e-128
1s4d_A280 Uroporphyrin-III C-methyltransferase; tetrapyrrole 1e-127
1ve2_A235 Uroporphyrin-III C-methyltransferase; heme, biosyn 1e-120
1pjq_A457 CYSG, siroheme synthase; rossman fold, nucleotide 1e-119
1va0_A239 Uroporphyrin-III C-methyltransferase; structural g 1e-118
1cbf_A285 Cobalt-precorrin-4 transmethylase; precorrin-4 met 2e-95
4e16_A253 Precorrin-4 C(11)-methyltransferase; structural ge 4e-94
3ndc_A264 Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH 2e-92
2zvb_A295 Precorrin-3 C17-methyltransferase; plasmid, struct 3e-75
2e0n_A259 Precorrin-2 C20-methyltransferase; cobalt-factor I 3e-72
3nut_A251 Precorrin-3 methylase; vitamin B12 pathway, cobala 1e-66
2z6r_A265 Diphthine synthase; methyltransferase, S-adenosyl- 1e-56
1vhv_A268 Diphthine synthase; structural genomics, transfera 4e-51
2qbu_A232 Precorrin-2 methyltransferase; HET: SAH; 2.10A {Me 4e-50
3i4t_A292 Diphthine synthase; niaid, ssgcid, infectious dise 8e-48
2npn_A251 Putative cobalamin synthesis related protein; COBF 5e-46
1wde_A294 Probable diphthine synthase; structural genomics, 6e-44
3nd1_A275 Precorrin-6A synthase/COBF protein; methyltransfer 4e-40
2bb3_A221 Cobalamin biosynthesis precorrin-6Y methylase (CB; 1e-15
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-05
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A* Length = 294 Back     alignment and structure
 Score =  370 bits (952), Expect = e-128
 Identities = 110/240 (45%), Positives = 155/240 (64%), Gaps = 1/240 (0%)

Query: 126 PGNVYLVGTGPGDPDLLTLKAMKVIQKADLLLYDRLVSNDVLDLVAPNARLLYVGKTAGY 185
            G+V LVG GPGDP LLTL+A  ++Q+A++++YDRLV+ +++ L+  + + +YVGK  G+
Sbjct: 24  AGSVALVGAGPGDPGLLTLRAWALLQQAEVVVYDRLVARELIALLPESCQRIYVGKRCGH 83

Query: 186 HSRTQEEIHELLLSFAEVGATVVRLKGGDPLVFGRGGEEMDFLQQKGIQVKVIPGITAAS 245
           HS  QEEI+ELL+  A     VVRLKGGDP +FGRG EE++ L + G+  +V+PG+TAAS
Sbjct: 84  HSLPQEEINELLVRLARQQRRVVRLKGGDPFIFGRGAEELERLLEAGVDCQVVPGVTAAS 143

Query: 246 GIAAELGIPLTHRGVANSVRFLTGHSRKGGTDPLFVAENAADPDSTLVVYMGLSTLPSLA 305
           G +   GIPLTHR +A S  F+TGH +  G   L      A    TLV YMGL  L  +A
Sbjct: 144 GCSTYAGIPLTHRDLAQSCTFVTGHLQNDGRLDLDW-AGLARGKQTLVFYMGLGNLAEIA 202

Query: 306 LKLMHHGLPPHTPAAAIERGTTPQQRIVFSELKDLADKIGVEELVSPTLIIIGKVVSLSP 365
            +L+ HGL   TPAA + +GT   Q++    L +L       +L  PTLI++G+VV+L  
Sbjct: 203 ARLVEHGLASDTPAALVSQGTQAGQQVTRGALAELPALARRYQLKPPTLIVVGQVVALFA 262
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1 Length = 280 Back     alignment and structure
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1 Length = 235 Back     alignment and structure
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A* Length = 457 Back     alignment and structure
>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A Length = 239 Back     alignment and structure
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A* Length = 285 Back     alignment and structure
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile} Length = 253 Back     alignment and structure
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A Length = 264 Back     alignment and structure
>2zvb_A Precorrin-3 C17-methyltransferase; plasmid, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SAH; 2.00A {Thermus thermophilus} PDB: 2zvc_A* Length = 295 Back     alignment and structure
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A* Length = 259 Back     alignment and structure
>3nut_A Precorrin-3 methylase; vitamin B12 pathway, cobalamin, methyltransferase, transfera; HET: SAH; 2.22A {Rhodobacter capsulatus} Length = 251 Back     alignment and structure
>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ... Length = 265 Back     alignment and structure
>1vhv_A Diphthine synthase; structural genomics, transferase; HET: MSE; 1.75A {Archaeoglobus fulgidus} SCOP: c.90.1.1 Length = 268 Back     alignment and structure
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid} Length = 232 Back     alignment and structure
>3i4t_A Diphthine synthase; niaid, ssgcid, infectious disease, anaerobic parasitic protozoan, structural genomics, decode, UW, SBRI; 2.49A {Entamoeba histolytica} Length = 292 Back     alignment and structure
>2npn_A Putative cobalamin synthesis related protein; COBF, PSI-2, MAD, struc genomics, SAM, S-adenosylmethionine, MCSG; HET: MSE SAM; 1.60A {Corynebacterium diphtheriae} Length = 251 Back     alignment and structure
>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken S genomics/proteomics initiative, RSGI, transferase; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1 Length = 294 Back     alignment and structure
>3nd1_A Precorrin-6A synthase/COBF protein; methyltransferase, deacetylase, transferase; HET: SAH; 1.50A {Rhodobacter capsulatus} Length = 275 Back     alignment and structure
>2bb3_A Cobalamin biosynthesis precorrin-6Y methylase (CB; beta, alpha-beta-alpha sandwich, structural genomics, PSI, P structure initiative; HET: SAH; 2.27A {Archaeoglobus fulgidus} SCOP: c.90.1.1 Length = 221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query381
1s4d_A280 Uroporphyrin-III C-methyltransferase; tetrapyrrole 100.0
2ybo_A294 Methyltransferase; SUMT, NIRE, heme D1 biosynthesi 100.0
4e16_A253 Precorrin-4 C(11)-methyltransferase; structural ge 100.0
1pjq_A457 CYSG, siroheme synthase; rossman fold, nucleotide 100.0
3ndc_A264 Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH 100.0
1ve2_A235 Uroporphyrin-III C-methyltransferase; heme, biosyn 100.0
1cbf_A285 Cobalt-precorrin-4 transmethylase; precorrin-4 met 100.0
1va0_A239 Uroporphyrin-III C-methyltransferase; structural g 100.0
2e0n_A259 Precorrin-2 C20-methyltransferase; cobalt-factor I 100.0
3kwp_A296 Predicted methyltransferase; putative methyltransf 100.0
3nut_A251 Precorrin-3 methylase; vitamin B12 pathway, cobala 100.0
3i4t_A292 Diphthine synthase; niaid, ssgcid, infectious dise 100.0
1wyz_A242 Putative S-adenosylmethionine-dependent methyltra; 100.0
2qbu_A232 Precorrin-2 methyltransferase; HET: SAH; 2.10A {Me 100.0
2z6r_A265 Diphthine synthase; methyltransferase, S-adenosyl- 100.0
2zvb_A295 Precorrin-3 C17-methyltransferase; plasmid, struct 100.0
1wde_A294 Probable diphthine synthase; structural genomics, 100.0
1vhv_A268 Diphthine synthase; structural genomics, transfera 100.0
3nd1_A275 Precorrin-6A synthase/COBF protein; methyltransfer 100.0
2npn_A251 Putative cobalamin synthesis related protein; COBF 100.0
2bb3_A221 Cobalamin biosynthesis precorrin-6Y methylase (CB; 99.97
3hh1_A117 Tetrapyrrole methylase family protein; chlorobium 99.88
3ffy_A115 Putative tetrapyrrole (corrin/porphyrin) methylas; 99.51
3mvn_A163 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M 88.23
>1s4d_A Uroporphyrin-III C-methyltransferase; tetrapyrrole biosynthesis, cobalamin, SAM, SAH, uroporphyrin methyltransferase; HET: SAH; 2.70A {Pseudomonas denitrificans} SCOP: c.90.1.1 Back     alignment and structure
Probab=100.00  E-value=3.9e-44  Score=345.09  Aligned_cols=243  Identities=38%  Similarity=0.647  Sum_probs=212.4

Q ss_pred             CCCCCEEEEEecCCCCcccchHHHHHHHHhcCEEEEcCCCCHHHHhhhCCCceEEEeccccCCCCCCHHHHHHHHHHHHH
Q 016852          123 KCGPGNVYLVGTGPGDPDLLTLKAMKVIQKADLLLYDRLVSNDVLDLVAPNARLLYVGKTAGYHSRTQEEIHELLLSFAE  202 (381)
Q Consensus       123 ~~~~g~l~lVGiGPGd~elLTlkA~~aL~~ADvVi~~~~~~~~ll~~l~~~~e~i~~~~~~~~~~~~~eei~~~i~~~~~  202 (381)
                      .+.+|+||+||+||||+++||++|+++|++||+|+++.++.+.++++++.+++++++++....+...++++.+.|.++++
T Consensus        11 ~~~~g~l~lVG~GpGd~~lLTl~A~~~L~~ADvV~~d~~~~~~ll~~~~~~~~~~~~~k~~~~~~~~~~~i~~~l~~~~~   90 (280)
T 1s4d_A           11 ALEKGSVWLVGAGPGDPGLLTLHAANALRQADVIVHDALVNEDCLKLARPGAVLEFAGKRGGKPSPKQRDISLRLVELAR   90 (280)
T ss_dssp             CCCSSCEEEEECBSSCTTSSBHHHHHHHHHCSEEEECSCSCTTGGGGSSTTCCEEECSCCC--CCCCHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEEecCCCCHHHHHHHHHHHHHhCCEEEEcCCCCHHHHHhccCCCEEEeccccccccccCHHHHHHHHHHHHh
Confidence            44569999999999999999999999999999999999888888898887888888887777788899999999999999


Q ss_pred             cCCeEEEEecCCCCCcCCHHHHHHHHHhCCCcEEEEcCchHHHHHHHhcCCCCccCcccceeEEecCCCCCCCCChHHHH
Q 016852          203 VGATVVRLKGGDPLVFGRGGEEMDFLQQKGIQVKVIPGITAASGIAAELGIPLTHRGVANSVRFLTGHSRKGGTDPLFVA  282 (381)
Q Consensus       203 ~Gk~VvvL~sGDP~~ys~~~~l~~~l~~~gi~veVIPGISS~~aaaA~lGipl~~~~~~~~v~ivs~hgr~~~~~~~~l~  282 (381)
                      +|++||+|++|||+||+++.++++.+.+.|++++|||||||+++++|++|+||++++...++.|+++|++.........+
T Consensus        91 ~G~~Vv~L~~GDP~i~g~g~~l~~~l~~~gi~veviPGiSs~~aa~a~~Gipl~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (280)
T 1s4d_A           91 AGNRVLRLKGGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGIGGLAYAGIPVTHREVNHAVTFLTGHDSSGLVPDRINW  170 (280)
T ss_dssp             TTCCEEEEESBCTTSSSSHHHHHHHHHTTTCCEEEECCCCTTTHHHHHTTCCSCCTTTCSEEEEEECCC-------CCCH
T ss_pred             CCCeEEEEcCCCCccccCHHHHHHHHHHCCCCEEEEcCccHHHHHHHHcCCCccCCCcccEEEEECCcCCcccccccccH
Confidence            99999999999999999999999999999999999999999999999999999999888889999999875310000013


Q ss_pred             HHhcCCCCcEEEEcCCCCHHHHHHHHHHCCCCCCceeeeEecCCCCCcEEEEEehhhHHHhhccCCCCCcEEEEEcCccc
Q 016852          283 ENAADPDSTLVVYMGLSTLPSLALKLMHHGLPPHTPAAAIERGTTPQQRIVFSELKDLADKIGVEELVSPTLIIIGKVVS  362 (381)
Q Consensus       283 ~~l~~~~~tlVIl~~~~~~~~Ia~~L~~~G~~~~t~v~v~e~lg~~dErI~~~tL~eL~~~l~~~~~~~~~viiIg~~~~  362 (381)
                      +.+.....|+|||+..+++.++++.|++.|+++++++++++++|+++|+++.++++++.+.+.+.+++.|++||||+.+.
T Consensus       171 ~~l~~~~~tlVl~~~~~~~~~i~~~L~~~G~~~~~~v~v~~~l~~~~E~i~~~tl~el~~~~~~~~~~~~~vivig~~~~  250 (280)
T 1s4d_A          171 QGIASGSPVIVMYMAMKHIGAITANLIAGGRSPDEPVAFVCNAATPQQAVLETTLARAEADVAAAGLEPPAIVVVGEVVR  250 (280)
T ss_dssp             HHHHTTCSEEEEESCSTTHHHHHHHHHHTTCCTTCEEEEEESTTSTTCEEEEEETTTHHHHHHHHTCCSSEEEEESGGGG
T ss_pred             HHHhCCCCeEEEECchhhHHHHHHHHHhcCCCCCCEEEEEEeCCCCCeEEEEecHHHHHHHHHhcCCCCCEEEEECchhc
Confidence            34555678999999999999999999999999899999999999999999999999998876555688999999999987


Q ss_pred             cCC
Q 016852          363 LSP  365 (381)
Q Consensus       363 ~~~  365 (381)
                      .+.
T Consensus       251 ~~~  253 (280)
T 1s4d_A          251 LRA  253 (280)
T ss_dssp             GHH
T ss_pred             hhh
Confidence            643
>2ybo_A Methyltransferase; SUMT, NIRE, heme D1 biosynthesis; HET: SAH; 2.00A {Pseudomonas aeruginosa} PDB: 2ybq_A* Back     alignment and structure
>4e16_A Precorrin-4 C(11)-methyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.49A {Clostridium difficile} Back     alignment and structure
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A* Back     alignment and structure
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A Back     alignment and structure
>1ve2_A Uroporphyrin-III C-methyltransferase; heme, biosynthesis, structural genomics, NPPSFA; 1.80A {Thermus thermophilus} SCOP: c.90.1.1 Back     alignment and structure
>1cbf_A Cobalt-precorrin-4 transmethylase; precorrin-4 methyltransferase, cobalamin biosynth methyltransferase; HET: SAH; 2.40A {Bacillus megaterium} SCOP: c.90.1.1 PDB: 2cbf_A* Back     alignment and structure
>1va0_A Uroporphyrin-III C-methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.97A {Thermus thermophilus} SCOP: c.90.1.1 PDB: 1v9a_A Back     alignment and structure
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A* Back     alignment and structure
>3kwp_A Predicted methyltransferase; putative methyltransferase, MCSG, STRU genomics, PSI-2, protein structure initiative; 2.29A {Lactobacillus brevis atcc 367} Back     alignment and structure
>3nut_A Precorrin-3 methylase; vitamin B12 pathway, cobalamin, methyltransferase, transfera; HET: SAH; 2.22A {Rhodobacter capsulatus} Back     alignment and structure
>3i4t_A Diphthine synthase; niaid, ssgcid, infectious disease, anaerobic parasitic protozoan, structural genomics, decode, UW, SBRI; 2.49A {Entamoeba histolytica} Back     alignment and structure
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1 Back     alignment and structure
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid} Back     alignment and structure
>2z6r_A Diphthine synthase; methyltransferase, S-adenosyl-L-methionine, transferase; HET: SAH MES; 1.50A {Pyrococcus horikoshii} PDB: 2dek_A* 1wng_A* 1vce_A* 2ed3_A* 2e4r_A* 2owg_A* 2ek3_A* 2pcm_A* 2p5c_A* 2hut_A* 2emr_A* 2el3_A* 2el0_A* 2ejk_A* 2eld_A* 2el2_A* 2eka_A* 2eh5_A* 2pcg_A* 2el1_A* ... Back     alignment and structure
>2zvb_A Precorrin-3 C17-methyltransferase; plasmid, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SAH; 2.00A {Thermus thermophilus} PDB: 2zvc_A* Back     alignment and structure
>1wde_A Probable diphthine synthase; structural genomics, conserved hypothetical protein, riken S genomics/proteomics initiative, RSGI, transferase; 2.00A {Aeropyrum pernix} SCOP: c.90.1.1 Back     alignment and structure
>1vhv_A Diphthine synthase; structural genomics, transferase; HET: MSE; 1.75A {Archaeoglobus fulgidus} SCOP: c.90.1.1 Back     alignment and structure
>3nd1_A Precorrin-6A synthase/COBF protein; methyltransferase, deacetylase, transferase; HET: SAH; 1.50A {Rhodobacter capsulatus} Back     alignment and structure
>2npn_A Putative cobalamin synthesis related protein; COBF, PSI-2, MAD, struc genomics, SAM, S-adenosylmethionine, MCSG; HET: MSE SAM; 1.60A {Corynebacterium diphtheriae} Back     alignment and structure
>2bb3_A Cobalamin biosynthesis precorrin-6Y methylase (CB; beta, alpha-beta-alpha sandwich, structural genomics, PSI, P structure initiative; HET: SAH; 2.27A {Archaeoglobus fulgidus} SCOP: c.90.1.1 Back     alignment and structure
>3ffy_A Putative tetrapyrrole (corrin/porphyrin) methylas; structural genomics, APC62130.1, methyltransferase, PSI-2, P structure initiative; 2.00A {Bacteroides fragilis} PDB: 3fq6_A Back     alignment and structure
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 381
d1s4da_265 c.90.1.1 (A:) Uroporphyrin-III C-methyltransferase 4e-61
d2deka1265 c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyroc 5e-58
d1pjqa2242 c.90.1.1 (A:216-457) Siroheme synthase CysG, domai 1e-53
d1vhva_251 c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon A 2e-52
d1va0a1225 c.90.1.1 (A:2-226) Hypothetical protein TTHA0667 { 3e-50
d1wdea_289 c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum 9e-49
d1cbfa_239 c.90.1.1 (A:) Cobalt precorrin-4 methyltransferase 2e-47
d1ve2a1235 c.90.1.1 (A:1-235) Uroporphyrin-III C-methyltransf 2e-46
d2bb3a1195 c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE {Ar 3e-28
d1wyza1233 c.90.1.1 (A:2-234) Putative methytransferase BT419 6e-20
>d1s4da_ c.90.1.1 (A:) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Pseudomonas denitrificans [TaxId: 43306]} Length = 265 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA)
species: Pseudomonas denitrificans [TaxId: 43306]

 Score =  195 bits (497), Expect = 4e-61
 Identities = 93/239 (38%), Positives = 133/239 (55%)

Query: 126 PGNVYLVGTGPGDPDLLTLKAMKVIQKADLLLYDRLVSNDVLDLVAPNARLLYVGKTAGY 185
            G+V+LVG GPGDP LLTL A   +++AD++++D LV+ D L L  P A L + GK  G 
Sbjct: 9   KGSVWLVGAGPGDPGLLTLHAANALRQADVIVHDALVNEDCLKLARPGAVLEFAGKRGGK 68

Query: 186 HSRTQEEIHELLLSFAEVGATVVRLKGGDPLVFGRGGEEMDFLQQKGIQVKVIPGITAAS 245
            S  Q +I   L+  A  G  V+RLKGGDP VFGRGGEE   L +  +  +++PGITA  
Sbjct: 69  PSPKQRDISLRLVELARAGNRVLRLKGGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGI 128

Query: 246 GIAAELGIPLTHRGVANSVRFLTGHSRKGGTDPLFVAENAADPDSTLVVYMGLSTLPSLA 305
           G  A  GIP+THR V ++V FLTGH   G        +  A     +V+YM +  + ++ 
Sbjct: 129 GGLAYAGIPVTHREVNHAVTFLTGHDSSGLVPDRINWQGIASGSPVIVMYMAMKHIGAIT 188

Query: 306 LKLMHHGLPPHTPAAAIERGTTPQQRIVFSELKDLADKIGVEELVSPTLIIIGKVVSLS 364
             L+  G  P  P A +    TPQQ ++ + L      +    L  P ++++G+VV L 
Sbjct: 189 ANLIAGGRSPDEPVAFVCNAATPQQAVLETTLARAEADVAAAGLEPPAIVVVGEVVRLR 247
>d2deka1 c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyrococcus horikoshii [TaxId: 53953]} Length = 265 Back     information, alignment and structure
>d1pjqa2 c.90.1.1 (A:216-457) Siroheme synthase CysG, domains 4 and 5 {Salmonella typhimurium [TaxId: 90371]} Length = 242 Back     information, alignment and structure
>d1vhva_ c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 251 Back     information, alignment and structure
>d1va0a1 c.90.1.1 (A:2-226) Hypothetical protein TTHA0667 {Thermus thermophilus [TaxId: 274]} Length = 225 Back     information, alignment and structure
>d1wdea_ c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 56636]} Length = 289 Back     information, alignment and structure
>d1cbfa_ c.90.1.1 (A:) Cobalt precorrin-4 methyltransferase CbiF {Bacillus megaterium [TaxId: 1404]} Length = 239 Back     information, alignment and structure
>d1ve2a1 c.90.1.1 (A:1-235) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Thermus thermophilus [TaxId: 274]} Length = 235 Back     information, alignment and structure
>d2bb3a1 c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE {Archaeoglobus fulgidus [TaxId: 2234]} Length = 195 Back     information, alignment and structure
>d1wyza1 c.90.1.1 (A:2-234) Putative methytransferase BT4190 {Bacteroides thetaiotaomicron [TaxId: 818]} Length = 233 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query381
d1s4da_265 Uroporphyrin-III C-methyltransferase (SUMT, UROM, 100.0
d1ve2a1235 Uroporphyrin-III C-methyltransferase (SUMT, UROM, 100.0
d1pjqa2242 Siroheme synthase CysG, domains 4 and 5 {Salmonell 100.0
d1cbfa_239 Cobalt precorrin-4 methyltransferase CbiF {Bacillu 100.0
d1vhva_251 Diphthine synthase, DphB {Archaeon Archaeoglobus f 100.0
d1va0a1225 Hypothetical protein TTHA0667 {Thermus thermophilu 99.98
d2deka1265 Diphthine synthase, DphB {Pyrococcus horikoshii [T 99.97
d1wdea_289 Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 99.97
d2bb3a1195 Precorrin-6y methylase CbiE {Archaeoglobus fulgidu 99.97
d1wyza1233 Putative methytransferase BT4190 {Bacteroides thet 99.96
>d1s4da_ c.90.1.1 (A:) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Pseudomonas denitrificans [TaxId: 43306]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Tetrapyrrole methylase
superfamily: Tetrapyrrole methylase
family: Tetrapyrrole methylase
domain: Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA)
species: Pseudomonas denitrificans [TaxId: 43306]

Probab=100.00  E-value=6.7e-41  Score=315.48  Aligned_cols=243  Identities=38%  Similarity=0.647  Sum_probs=209.9

Q ss_pred             CCCCCEEEEEecCCCCcccchHHHHHHHHhcCEEEEcCCCCHHHHhhhCCCceEEEeccccCCCCCCHHHHHHHHHHHHH
Q 016852          123 KCGPGNVYLVGTGPGDPDLLTLKAMKVIQKADLLLYDRLVSNDVLDLVAPNARLLYVGKTAGYHSRTQEEIHELLLSFAE  202 (381)
Q Consensus       123 ~~~~g~l~lVGiGPGd~elLTlkA~~aL~~ADvVi~~~~~~~~ll~~l~~~~e~i~~~~~~~~~~~~~eei~~~i~~~~~  202 (381)
                      ...+|+||+||+||||+++||++|+++|++||+|++++++.+.++++++++............+...+.+..+.+.+.++
T Consensus         6 ~~~~Gkl~iVG~GPGdp~~iT~~a~~~L~~ADvV~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~   85 (265)
T d1s4da_           6 ALEKGSVWLVGAGPGDPGLLTLHAANALRQADVIVHDALVNEDCLKLARPGAVLEFAGKRGGKPSPKQRDISLRLVELAR   85 (265)
T ss_dssp             CCCSSCEEEEECBSSCTTSSBHHHHHHHHHCSEEEECSCSCTTGGGGSSTTCCEEECSCCC--CCCCHHHHHHHHHHHHH
T ss_pred             CCCCeEEEEEEeCCCCHHHHHHHHHHHHHcCCEEEEccccCHHHHhhcccccEeeecccccccccchhHHHHHHHHHHHH
Confidence            44579999999999999999999999999999999999988888998887777666555555566678888899999999


Q ss_pred             cCCeEEEEecCCCCCcCCHHHHHHHHHhCCCcEEEEcCchHHHHHHHhcCCCCccCcccceeEEecCCCCCCCCChHHHH
Q 016852          203 VGATVVRLKGGDPLVFGRGGEEMDFLQQKGIQVKVIPGITAASGIAAELGIPLTHRGVANSVRFLTGHSRKGGTDPLFVA  282 (381)
Q Consensus       203 ~Gk~VvvL~sGDP~~ys~~~~l~~~l~~~gi~veVIPGISS~~aaaA~lGipl~~~~~~~~v~ivs~hgr~~~~~~~~l~  282 (381)
                      +|++|++|++|||++|+++..+++.+.+.+++++|||||||++++++.+|+|++..+....+.+++.+.+.........+
T Consensus        86 ~G~~V~~l~~GDp~~~~~~~~~~~~~~~~~~~~eViPGiss~~aa~a~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l  165 (265)
T d1s4da_          86 AGNRVLRLKGGDPFVFGRGGEEALTLVEHQVPFRIVPGITAGIGGLAYAGIPVTHREVNHAVTFLTGHDSSGLVPDRINW  165 (265)
T ss_dssp             TTCCEEEEESBCTTSSSSHHHHHHHHHTTTCCEEEECCCCTTTHHHHHTTCCSCCTTTCSEEEEEECCC-------CCCH
T ss_pred             CCCcEEEEecCCcccccchHHHHHHHHhcCCceEEecccccchhhHHHhhhhcccCCCceEEEEecCCCccccccchHHH
Confidence            99999999999999999999999999999999999999999999999999999998887777788877643321111123


Q ss_pred             HHhcCCCCcEEEEcCCCCHHHHHHHHHHCCCCCCceeeeEecCCCCCcEEEEEehhhHHHhhccCCCCCcEEEEEcCccc
Q 016852          283 ENAADPDSTLVVYMGLSTLPSLALKLMHHGLPPHTPAAAIERGTTPQQRIVFSELKDLADKIGVEELVSPTLIIIGKVVS  362 (381)
Q Consensus       283 ~~l~~~~~tlVIl~~~~~~~~Ia~~L~~~G~~~~t~v~v~e~lg~~dErI~~~tL~eL~~~l~~~~~~~~~viiIg~~~~  362 (381)
                      ..+.....++++++....+.++++.|.+.|++++++|++++++|+++|+|+.+||+|+.+.+++.++++|++||||++++
T Consensus       166 ~~~~~~~~~~v~~~~~~~~~~~~~~L~~~g~~~d~pv~vv~~l~~~~E~i~~gtL~el~~~~~~~~~~~p~liivG~~v~  245 (265)
T d1s4da_         166 QGIASGSPVIVMYMAMKHIGAITANLIAGGRSPDEPVAFVCNAATPQQAVLETTLARAEADVAAAGLEPPAIVVVGEVVR  245 (265)
T ss_dssp             HHHHTTCSEEEEESCSTTHHHHHHHHHHTTCCTTCEEEEEESTTSTTCEEEEEETTTHHHHHHHHTCCSSEEEEESGGGG
T ss_pred             HHHhccCcceeccchHHHHHHHHHHHHHcCCCCCcEEEEEEeCCCCCeEEEEEEHHHHHHHHHHcCCCCCEEEEEehHhh
Confidence            34556788999999999999999999999999999999999999999999999999999987778889999999999887


Q ss_pred             cCC
Q 016852          363 LSP  365 (381)
Q Consensus       363 ~~~  365 (381)
                      ++.
T Consensus       246 ~r~  248 (265)
T d1s4da_         246 LRA  248 (265)
T ss_dssp             GHH
T ss_pred             hhh
Confidence            654
>d1ve2a1 c.90.1.1 (A:1-235) Uroporphyrin-III C-methyltransferase (SUMT, UROM, CobA) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1pjqa2 c.90.1.1 (A:216-457) Siroheme synthase CysG, domains 4 and 5 {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1cbfa_ c.90.1.1 (A:) Cobalt precorrin-4 methyltransferase CbiF {Bacillus megaterium [TaxId: 1404]} Back     information, alignment and structure
>d1vhva_ c.90.1.1 (A:) Diphthine synthase, DphB {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1va0a1 c.90.1.1 (A:2-226) Hypothetical protein TTHA0667 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2deka1 c.90.1.1 (A:1-265) Diphthine synthase, DphB {Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1wdea_ c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d2bb3a1 c.90.1.1 (A:1-195) Precorrin-6y methylase CbiE {Archaeoglobus fulgidus [TaxId: 2234]} Back     information, alignment and structure
>d1wyza1 c.90.1.1 (A:2-234) Putative methytransferase BT4190 {Bacteroides thetaiotaomicron [TaxId: 818]} Back     information, alignment and structure