Citrus Sinensis ID: 020711

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320--
Protein Sequence
MGSGETRRFPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRGIALAESQSDEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLKEKLNGLRLYVIRRWPMVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRYQILGVFLLIQLCIIAAEGLRRSNLSSIASSVHHTSLGFQQASTGRGLPVLNEEGSLIPSESDKGGWVLDSTSTSEVCLKCTNLIMQ
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccccHHHcccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHcccccccccccEEEEEEcccEEEc
Coil and Loop (DISEMBL)
mgsgetrrfppaaqpEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTgsgqqtlgeeycditqvvgpqrlpptparRALFIVYQTAVPYIAERISSRVASRGIalaesqsdefdrynaagssrdqsletiespsssaprVYSAVSRLKEKLNGLRLYVIRRWPMVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVfigkptnqrpryqILGVFLLIQLCIIAAEGLRRSNLSSIASsvhhtslgfqqastgrglpvlneegslipsesdkggwvldststsevCLKCTNLIMQ
Flexible Loop (DISEMBL)
mgsgetrrfppaaqpEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRGIALAesqsdefdrynaagssrdqsletiespsssaprvYSAVSRLKEKLNGLRLYVIRRWPMVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRYQILGVFLLIQLCIIAAEGLRRSNLSSIASSVHHTSLGFQQASTGRGLPVLNEEGSlipsesdkggwvldststsevclkctnlimq
Low Complexity Region (SEG)
MGSGETRRFPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRGIALAESQSDEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLKEKLNGLRLYVIRRWPMVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRYQILGVFLLIQLCIIAAEGLRRSNLSSIASSVHHTSLGFQQASTGRGLPVLNEEGSLIPSESDKGGWVLDSTSTSEVCLKCTNLIMQ
Disordered region (IsUnstruct)
*************************QYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVA*******************************************AVSRLKEKLNGLRLYVIRRWPMVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRYQILGVFLLIQLCIIAAEGLRRSNL****************************************GWVLDSTSTSEVCLKCTNLI**
Disordered Region (DISOPRED)
******R****AAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVVGP**LPPTPARRALFIVYQTAVPYIAERISSRVASRG***************************************SAVSRLKEKLNGLRLYVIRRWPMVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYV************QILGVFLLIQLCIIAAEGLR**************************************SESDKGGWVLDSTSTSEVCLKCTNLIMQ
Disordered Region (DISEMBL)
**********PAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRGIALAESQSDEFDRYN*************************AVSRLKEKLNGLRLYVIRRWPMVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRYQILGVFLLIQLCIIAAEGLRRSNLSSIASSVHHTSLGFQQASTGRGLPVLNEEGSLIPSESDKGGWVLDSTSTSEVCLKCTNLIMQ
Disordered Region (DISPRO)
********FPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRGIALAESQSDE*************************PRVYSAVSRLKEKLNGLRLYVIRRWPMVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRYQILGVFLLIQLCIIAAEGLRRSNLSSIAS************************GSLIPSESDKGGWVLDSTSTSEVCLKCTNLIMQ
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MGSGETRRFPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRGIALAESQSDEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLKEKLNGLRLYVIRRWPMVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRYQILGVFLLIQLCIIAAEGLRRSNLSSIASSVHHTSLGFQQASTGRGLPVLNEEGSLIPSESDKGGWVLDSTSTSEVCLKCTNLIMQ
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	322	2.2.26 [Sep-21-2011]
Q9SYU4	381	Peroxisome biogenesis fac	yes	no	0.953	0.805	0.682	1e-118
Q8HXW8	326	Peroxisome biogenesis fac	N/A	no	0.701	0.693	0.289	7e-18
O60683	326	Peroxisome biogenesis fac	yes	no	0.673	0.665	0.292	8e-18
Q54S31	374	Peroxisome biogenesis fac	yes	no	0.506	0.435	0.278	1e-17
B1AUE5	324	Peroxisome biogenesis fac	yes	no	0.596	0.592	0.285	2e-17
Q00940	295	Peroxisome biogenesis fac	N/A	no	0.586	0.640	0.262	3e-12
Q05568	337	Peroxisome biogenesis fac	yes	no	0.767	0.732	0.237	3e-11
Q92265	419	Peroxisome biogenesis fac	yes	no	0.645	0.496	0.25	6e-08

>sp|Q9SYU4|PEX10_ARATH Peroxisome biogenesis factor 10 OS=Arabidopsis thaliana GN=PEX10 PE=1 SV=1

 Score =  423 bits (1088), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 215/315 (68%), Positives = 244/315 (77%), Gaps = 8/315 (2%)

Query: 4   GETRRFPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLY 63
           G  RRFP AAQPEIMRAAEKD+QYASFI++ACRDAFR LFGTR+A+AYQ E KL+GQMLY
Sbjct: 21  GGIRRFPLAAQPEIMRAAEKDDQYASFIHEACRDAFRHLFGTRIALAYQKEMKLLGQMLY 80

Query: 64  YVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRG 123
           YVLTTGSGQQTLGEEYCDI QV GP  L PTPARRALFI+YQTAVPYIAERIS+R A++ 
Sbjct: 81  YVLTTGSGQQTLGEEYCDIIQVAGPYGLSPTPARRALFILYQTAVPYIAERISTRAATQA 140

Query: 124 IALAESQSDEFDRYNAAGSSRDQSLETIESPSSSAPRV-YSAVSRLKEKLNGLRLYVIRR 182
           +   ES  DEF      G S   S   I+ PSSS      S VSRL ++L       I+R
Sbjct: 141 VTFDES--DEF-----FGDSHIHSPRMIDLPSSSQVETSTSVVSRLNDRLMRSWHRAIQR 193

Query: 183 WPMVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRYQILGVF 242
           WP+VLP+ RE LQLVLRANLM FYFEG YYHISKR +G+RYVFIGK  NQRPRYQILGVF
Sbjct: 194 WPVVLPVAREVLQLVLRANLMLFYFEGFYYHISKRASGVRYVFIGKQLNQRPRYQILGVF 253

Query: 243 LLIQLCIIAAEGLRRSNLSSIASSVHHTSLGFQQASTGRGLPVLNEEGSLIPSESDKGGW 302
           LLIQLCI+AAEGLRRSNLSSI SS+   S+G  Q S GRGLPVLNEEG+LI SE++KG W
Sbjct: 254 LLIQLCILAAEGLRRSNLSSITSSIQQASIGSYQTSGGRGLPVLNEEGNLITSEAEKGNW 313

Query: 303 VLDSTSTSEVCLKCT 317
               ++++E   KCT
Sbjct: 314 STSDSTSTEAVGKCT 328

Involved in the formation of peroxisomes, lipid bodies and protein bodies. Required for normal-shaped peroxisomes that can physically associate with the outer membrane of the chloroplast envelope. Not involved in beta-oxidation and glyoxylate cycle.
Arabidopsis thaliana (taxid: 3702)

>sp|Q8HXW8|PEX10_MACFA Peroxisome biogenesis factor 10 OS=Macaca fascicularis GN=PEX10 PE=2 SV=1

 Score = 91.7 bits (226), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 23/249 (9%)

Query: 12  AAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSG 71
           A+ PE++RAA+KDE Y   +  A   A   L G R  + ++ E +L+  + Y+ LTT +G
Sbjct: 6   ASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLEWRKEVELLSDVAYFGLTTLAG 65

Query: 72  QQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRGIALAESQS 131
            QTLGEEY  I +V   Q   P+  RR + +     +PY+ +++   +        E Q+
Sbjct: 66  YQTLGEEYVSIVRVDPSQTRVPSWLRRGVLVTLHAVLPYLLDKVLLPLEQ------ELQA 119

Query: 132 DEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLKEKLNGLRLYVIRRWPMVLPIVR 191
           D      + GS        +         V   V R    L   +   + R   VL   R
Sbjct: 120 DPDSGRPSQGS--------LVPGGRGCSGVRRWVRRHTATLTEQQRRALLRAAFVL---R 168

Query: 192 EFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFI----GKPTNQRPRYQILGVFLLIQL 247
           + L  + + ++ +FY  G++YH++KR  GI Y+ +    G+    R  Y++LGV  L+ L
Sbjct: 169 QGLACLQQLHVAWFYIHGVFYHLAKRLTGITYLRVRSLPGEDLRARVSYRLLGVVSLLHL 228

Query: 248 CIIAAEGLR 256
             + + GLR
Sbjct: 229 --VLSVGLR 235

Somewhat implicated in the biogenesis of peroxisomes.

Macaca fascicularis (taxid: 9541)

>sp|O60683|PEX10_HUMAN Peroxisome biogenesis factor 10 OS=Homo sapiens GN=PEX10 PE=1 SV=1

 Score = 91.3 bits (225), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 120/246 (48%), Gaps = 29/246 (11%)

Query: 12  AAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSG 71
           A+ PE++RAA+KDE Y   +  A   A   L G R  + ++ E +L+  + Y+ LTT +G
Sbjct: 6   ASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLEWRKEVELLSDVAYFGLTTLAG 65

Query: 72  QQTLGEEYCDITQVVGPQRLP-PTPARRALFIVYQTAVPYIAERISSRVASRGIALAESQ 130
            QTLGEEY  I Q V P R+  P+  RR + +     +PY+ ++    +        E Q
Sbjct: 66  YQTLGEEYVSIIQ-VDPSRIHVPSSLRRGVLVTLHAVLPYLLDKALLPLEQ------ELQ 118

Query: 131 SDEFDRYNAAGSSRDQSLETIESPSSSAPRV---YSAVSRLKEKLNGLRLYVIRRWPMVL 187
           +D       +G     SL       S A R    ++A    +++   LR          +
Sbjct: 119 ADP-----DSGRPLQGSLGPGGRGCSGARRWMRHHTATLTEQQRRALLR---------AV 164

Query: 188 PIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFI----GKPTNQRPRYQILGVFL 243
            ++R+ L  + R ++ +FY  G++YH++KR  GI Y+ +    G+    R  Y++LGV  
Sbjct: 165 FVLRQGLACLQRLHVAWFYIHGVFYHLAKRLTGITYLRVRSLPGEDLRARVSYRLLGVIS 224

Query: 244 LIQLCI 249
           L+ L +
Sbjct: 225 LLHLVL 230

Somewhat implicated in the biogenesis of peroxisomes.

Homo sapiens (taxid: 9606)

>sp|Q54S31|PEX10_DICDI Peroxisome biogenesis factor 10 OS=Dictyostelium discoideum GN=pex10 PE=3 SV=2

 Score = 91.3 bits (225), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 63/226 (27%)

Query: 12  AAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSG 71
           A QP+I+R+++KDE Y     D C +   ++ G R  +  QSE+KL+   +YY+LTT  G
Sbjct: 81  ADQPDILRSSQKDEYYKKLFEDQCFEMLTRITGPRFIMNRQSESKLLANTIYYLLTTMIG 140

Query: 72  QQTLGEEYCDITQVVGPQ-RLPPTPARRALFIVYQTAVPYIAERISSRVASRGIALAESQ 130
            QTLGEEYC++ ++      +P  P R  L+  +  A PY+ ++                
Sbjct: 141 SQTLGEEYCNLRKIKDKTFSIPSIPDRIKLYFFHLLA-PYLIKK---------------- 183

Query: 131 SDEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLKEKLNGLRLYVIRRWPMVLPIV 190
                                     S P+++             +LY+++       I 
Sbjct: 184 --------------------------SLPKLFQRHP---------KLYILKE------IF 202

Query: 191 REFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRY 236
            +F +L    +L  FYF G Y+  SKR + IRY+F  K   +RP+Y
Sbjct: 203 PKFERL----HLALFYFNGSYFEFSKRLSDIRYIFNRKIDQKRPKY 244

Involved in the biogenesis of peroxisomes.

Dictyostelium discoideum (taxid: 44689)

>sp|B1AUE5|PEX10_MOUSE Peroxisome biogenesis factor 10 OS=Mus musculus GN=Pex10 PE=2 SV=1

 Score = 89.7 bits (221), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 25/217 (11%)

Query: 12  AAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSG 71
           A  PE++RAA+KDE Y   +  A  +A   L G +  + ++ E +L+  + Y+ LTT +G
Sbjct: 4   AGAPEVIRAAQKDEYYLGGLRSAAGEALHSLAGAKKWLEWRKEIELLSDIAYFGLTTIAG 63

Query: 72  QQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAER----ISSRVASRGIALA 127
            QTLGEEY  I QV   Q+  P+  RRA  +     +PY+ ++    +   + + G A  
Sbjct: 64  YQTLGEEYVGIIQVDPSQQRVPSRLRRAALVALHAVLPYLLDKALLPLEQELQADGDAPR 123

Query: 128 ESQSDEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLKEKLNGLRLYVIRRWPMVL 187
            SQ          G SR  +   +          + A +  +++   L+  V        
Sbjct: 124 ASQGSLLP----GGRSRSGARRWVR---------HHAATLTEQQRKALQRAVF------- 163

Query: 188 PIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYV 224
            I+R+    + R ++ +FY  G +YH++KR AGI Y+
Sbjct: 164 -ILRQGFACLHRLHVAWFYIHGTFYHLAKRLAGITYL 199

Somewhat implicated in the biogenesis of peroxisomes.

Mus musculus (taxid: 10090)

>sp|Q00940|PEX10_PICAN Peroxisome biogenesis factor 10 OS=Pichia angusta GN=PEX10 PE=3 SV=1

 Score = 72.8 bits (177), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 98/251 (39%), Gaps = 62/251 (24%)

Query: 12  AAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSG 71
           A  P I+RA +KD  + S +++   D  + + G+     Y  E + +   LY  LTT  G
Sbjct: 8   ANAPAIVRANQKDSYFESRLHNQLLDVVKAIKGSHFVHKYPEELRTLATALYLCLTTLVG 67

Query: 72  QQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRGIALAESQS 131
            +TLGEEY D+  V    R  P  A R  F+V     PY                     
Sbjct: 68  SKTLGEEYVDLVYVSRDGRKIPKFASRFGFVVAYVLFPYAVR------------------ 109

Query: 132 DEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLKEKLNGLRLYVIRRWPMVLPIVR 191
                         Q L+ +++  S   ++ S VS +                     V 
Sbjct: 110 --------------QLLQKLKAQQSRLAQLVSGVSYMN--------------------VM 135

Query: 192 EFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVF---IGKPTNQRPR--YQILGVFLLIQ 246
           + L L    +L  FYF G YY  +KR  G+RY F   + K   QR R  Y++LG+ ++ Q
Sbjct: 136 DLLNL----HLALFYFTGKYYQFAKRLFGLRYAFGYRVDK-NQQRARGNYELLGLLIIFQ 190

Query: 247 LCIIAAEGLRR 257
                   LR+
Sbjct: 191 TVFKNVANLRK 201

Somewhat implicated in the biogenesis of peroxisomes. It plays an important role in the regulation of peroxisome proliferation. May interact with PER1 (PEX8).

Pichia angusta (taxid: 870730)

>sp|Q05568|PEX10_YEAST Peroxisome biogenesis factor 10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEX10 PE=1 SV=1

 Score = 69.7 bits (169), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 132/332 (39%), Gaps = 85/332 (25%)

Query: 8   RFPPAAQPEIMRAAEKDEQYASF----IYDACRDAFRQLFGTRVAVAYQSETKLVGQMLY 63
           RFP A  P I++A +KDEQ        + + C+    QLF      +Y  E  +  ++LY
Sbjct: 19  RFPFADAPSIVQAHQKDEQIQGLLIMKVTELCKLIKSQLFVN----SYPKELSIFAKLLY 74

Query: 64  YVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTA---VPYIAERISSRVA 120
            + TTG   +TLGEEY D+T      R     A R   IV+  A    PY   ++  ++ 
Sbjct: 75  LLFTTGRRGRTLGEEYVDLTYT---NRKGTRLAGRLKMIVFAFAYPLCPYFITKLYKKIM 131

Query: 121 SRGIALAESQSDEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLKEKLNGLRLYVI 180
                                ++++  +E  ES                           
Sbjct: 132 K--------------------NNKESKIEDTES--------------------------- 144

Query: 181 RRWPMVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFI----GKPTNQRP-- 234
                V    +  L  +L  ++  FYF+G +Y ISKR  G+RYVF         N R   
Sbjct: 145 -----VAAFCKGLLDFILDVHMTLFYFKGAFYSISKRIFGMRYVFKHILSKNEANFREEG 199

Query: 235 --RYQILGVFLLIQLCIIAAEGLRRSNLSS-------IASSVHHTSLGFQQASTG---RG 282
             +Y++LG  LL Q  ++    +  S L S          S+  +S+G Q+ S      G
Sbjct: 200 SQKYKVLGYILLAQN-VMKWYPVLTSTLGSWIYGRKRTNDSITRSSVGLQERSEHESIEG 258

Query: 283 LPVLNEEGSLIPSESDKGGWVLDSTSTSEVCL 314
           +P  ++   +  S+ ++  ++ +++    +CL
Sbjct: 259 IPKESQLTHINLSDKNQLPFIPEASRKCILCL 290

Somewhat implicated in the biogenesis of peroxisomes.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

>sp|Q92265|PEX10_PICPA Peroxisome biogenesis factor 10 OS=Komagataella pastoris GN=PEX10 PE=1 SV=1

 Score = 58.5 bits (140), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 105/248 (42%), Gaps = 40/248 (16%)

Query: 12  AAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSG 71
           A  P I+RA +KD  + + + D  ++  +   G R    +  E  +  + LY  LTT  G
Sbjct: 26  ANAPAIVRANQKDSYFETVLRDKLQNVIQIFKGQRFTHTHPEEIGVAAKALYLSLTTLLG 85

Query: 72  QQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRGIALAESQS 131
            +TLGEEY D+  V    +  P    RA FI     +PY   R+  R+ S      E   
Sbjct: 86  TKTLGEEYVDLIYVSRDGKRIPRYLARAGFIFAYAILPYFLTRLFRRLKSSSTPKDEVTE 145

Query: 132 DEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLKEKLNGLRLYVIRRWPMVLPIVR 191
           ++ ++               E P S          R+++ L+ +                
Sbjct: 146 EKINK---------------ELPIS---------LRIEKYLSNMS-------------YS 168

Query: 192 EFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRP---RYQILGVFLLIQLC 248
           + L  ++  ++  FYF G +Y+ISKR   +RY F  K   +R     Y++LG  +++QL 
Sbjct: 169 KVLDTIMNLHIAVFYFSGQFYNISKRFFSMRYAFGHKINKERTPNGNYELLGGLIVLQLV 228

Query: 249 IIAAEGLR 256
           + +  G +
Sbjct: 229 MKSLGGFK 236

Necessary for peroxisome assembly, essential for import of both PTS1 and PTS2 proteins, and required for the establishment of the peroxisome lumen.

Pichia pastoris (taxid: 4922)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	322
255550147	358	peroxisome assembly protein, putative [R	0.953	0.857	0.763	1e-131
359476271	400	PREDICTED: peroxisome biogenesis factor	0.968	0.78	0.753	1e-129
224088762	357	predicted protein [Populus trichocarpa]	0.909	0.820	0.779	1e-123
449447165	397	PREDICTED: peroxisome biogenesis factor	0.965	0.783	0.723	1e-118
297825791	388	hypothetical protein ARALYDRAFT_481492 [	0.968	0.804	0.697	1e-117
147810850	1334	hypothetical protein VITISV_022107 [Viti	0.850	0.205	0.778	1e-117
356552390	394	PREDICTED: peroxisome biogenesis factor	0.922	0.753	0.719	1e-116
356564027	394	PREDICTED: peroxisome biogenesis factor	0.928	0.758	0.710	1e-116
18401101	381	peroxin 10 [Arabidopsis thaliana] gi|340	0.953	0.805	0.682	1e-116
7576235	381	Pex10p [Arabidopsis thaliana]	0.953	0.805	0.679	1e-115

>gi|255550147|ref|XP_002516124.1| peroxisome assembly protein, putative [Ricinus communis] gi|223544610|gb|EEF46126.1| peroxisome assembly protein, putative [Ricinus communis]

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 236/309 (76%), Positives = 262/309 (84%), Gaps = 2/309 (0%)

Query: 3   SGETRRFPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQML 62
           + E RRFPPAAQPEIMRAAEKD+QYASF+YDACRDAFR LFGTR+AVAYQSETKL+GQML
Sbjct: 39  NNELRRFPPAAQPEIMRAAEKDDQYASFVYDACRDAFRHLFGTRLAVAYQSETKLLGQML 98

Query: 63  YYVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASR 122
           YYVLTTGSGQQTLGEEYCDITQV GP  LPPTPARRALFI+YQTAVPY+AERISSRVASR
Sbjct: 99  YYVLTTGSGQQTLGEEYCDITQVSGPHGLPPTPARRALFILYQTAVPYMAERISSRVASR 158

Query: 123 GIALAESQSDEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLKEKLNGLRLYVIRR 182
           GI LA+S  DE     A  S   QS   ++ PS+S     S V+RL++  +GL L  +RR
Sbjct: 159 GITLADSIPDEPYTNTATESRGIQSSVMVDLPSTSGSGA-SIVTRLRQNFSGLWLTAVRR 217

Query: 183 WPMVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRYQILGVF 242
           WP VLP+ REFLQL+LR NLMFFYFEGLYYHISKR AGIRYVFIGKP+NQRPRYQILGVF
Sbjct: 218 WPTVLPVAREFLQLILRTNLMFFYFEGLYYHISKRAAGIRYVFIGKPSNQRPRYQILGVF 277

Query: 243 LLIQLCIIAAEGLRRSNLSSIASSVHHTSLGFQQASTGRGLPVLNEEGSLIPSESDKGGW 302
           LLIQLC+IAAEGLRRSNLSS+ASSVH TSL   Q S+GRGLPVLNEEG+LI +E+ +G W
Sbjct: 278 LLIQLCVIAAEGLRRSNLSSLASSVHQTSLEPHQ-SSGRGLPVLNEEGNLIATEAGRGSW 336

Query: 303 VLDSTSTSE 311
           V DSTSTSE
Sbjct: 337 VSDSTSTSE 345

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359476271|ref|XP_002279784.2| PREDICTED: peroxisome biogenesis factor 10-like [Vitis vinifera] gi|296081704|emb|CBI20709.3| unnamed protein product [Vitis vinifera]

 Score =  466 bits (1199), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 238/316 (75%), Positives = 264/316 (83%), Gaps = 4/316 (1%)

Query: 6   TRRFPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYV 65
           +RRFP AAQPEIMRAAEKD+QYAS +Y+ACRDAFR LFGTRVAVAYQSETKL+GQMLYY+
Sbjct: 32  SRRFPLAAQPEIMRAAEKDDQYASHVYEACRDAFRHLFGTRVAVAYQSETKLLGQMLYYI 91

Query: 66  LTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRGIA 125
           LTTGSGQQTLGEEYCDITQV GP  L PTPARRALFI+YQTAVPYIAER+SSRVA+RGIA
Sbjct: 92  LTTGSGQQTLGEEYCDITQVAGPYGLSPTPARRALFILYQTAVPYIAERVSSRVAARGIA 151

Query: 126 LAESQSDEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAV-SRLKEKLNGLRLYVIRRWP 184
           +A++Q+DE    N  GSS+ QS    E PSSSA     +V SRLKEK N   LY ++RWP
Sbjct: 152 IADAQADELYGNNVPGSSQVQSSAITEIPSSSASGASLSVLSRLKEKFNQSWLYAVQRWP 211

Query: 185 MVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRYQILGVFLL 244
           +VLP+ REFLQLVLR NLMFFYFEGLYYHISKR AGIRYVFIGK  NQRPRYQILGVFLL
Sbjct: 212 VVLPLAREFLQLVLRTNLMFFYFEGLYYHISKRAAGIRYVFIGKSLNQRPRYQILGVFLL 271

Query: 245 IQLCIIAAEGLRRSNLSSIASSVHHTSLGFQQASTGRGLPVLNEEGSLIPSESDKGGWVL 304
           IQLCIIAAEGLRR NLSSIASSVH T LG  Q +TG+GLPVLNEEG+LI +++DKG WV 
Sbjct: 272 IQLCIIAAEGLRRRNLSSIASSVHRTPLGAHQTATGQGLPVLNEEGNLIAADADKGSWVS 331

Query: 305 DST---STSEVCLKCT 317
           DST   S +    KCT
Sbjct: 332 DSTYVESQASGVSKCT 347

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224088762|ref|XP_002308529.1| predicted protein [Populus trichocarpa] gi|222854505|gb|EEE92052.1| predicted protein [Populus trichocarpa]

 Score =  447 bits (1150), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 230/295 (77%), Positives = 252/295 (85%), Gaps = 2/295 (0%)

Query: 18  MRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGE 77
           MRAAEKD+QYASFIYDACRDA R LFGTRVAVAYQ+E KL+GQMLYYVLTTGSGQQTLGE
Sbjct: 1   MRAAEKDDQYASFIYDACRDAIRHLFGTRVAVAYQNEAKLLGQMLYYVLTTGSGQQTLGE 60

Query: 78  EYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRGIALAESQSDEFDRY 137
           EYCD+TQV GP  L PTPARRALFIVYQTAVPYIAERISSRVASR IAL +S SDE  R 
Sbjct: 61  EYCDVTQVAGPHGLAPTPARRALFIVYQTAVPYIAERISSRVASRAIALDDSLSDEPYRD 120

Query: 138 NAAGSSRDQSLETIESP-SSSAPRVYSAVSRLKEKLNGLRLYVIRRWPMVLPIVREFLQL 196
            A+G+S+ QS   IE P SSS+    S +SRL++K NG+R+  I+RWP VLP+ REFLQL
Sbjct: 121 IASGTSQAQSPIIIELPSSSSSGTSVSVLSRLRQKFNGIRMQAIQRWPTVLPVAREFLQL 180

Query: 197 VLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRYQILGVFLLIQLCIIAAEGLR 256
           VLR NLMFFYFEG+YYHISKR +GIRYVFIGKP+NQRPRYQILGVFLLIQLCIIAAEGLR
Sbjct: 181 VLRTNLMFFYFEGMYYHISKRASGIRYVFIGKPSNQRPRYQILGVFLLIQLCIIAAEGLR 240

Query: 257 RSNLSSIASSVHHTSLGFQQASTGRGLPVLNEEGSLIPSESDKGGWVLDSTSTSE 311
           RSNLSSIASSVH TSL   Q + GRGLPVLNEEG+LIP E+  G WV DSTSTSE
Sbjct: 241 RSNLSSIASSVHQTSLVSHQ-TAGRGLPVLNEEGNLIPLEAGNGNWVSDSTSTSE 294

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449447165|ref|XP_004141339.1| PREDICTED: peroxisome biogenesis factor 10-like [Cucumis sativus]

 Score =  430 bits (1105), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 228/315 (72%), Positives = 253/315 (80%), Gaps = 4/315 (1%)

Query: 7   RRFPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVL 66
            RFP AAQPEIMRAAEKD+QYASF+YDACRDAFR LFG R+AVAYQSETKL+GQMLYYVL
Sbjct: 30  HRFPLAAQPEIMRAAEKDDQYASFVYDACRDAFRHLFGARLAVAYQSETKLLGQMLYYVL 89

Query: 67  TTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRGIAL 126
           TTGSGQQTLGEEYCDI QV GP  L P PARRALFIVYQTAVPYIAERISSRVASRGI L
Sbjct: 90  TTGSGQQTLGEEYCDINQVSGPYGLSPNPARRALFIVYQTAVPYIAERISSRVASRGIML 149

Query: 127 AESQSDEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLKEKLNGLRLYVIRRWPMV 186
           A+S SDEF    A+G +  QSL T+E   SS P   S   RL+ K++ L L  +R WP V
Sbjct: 150 ADSLSDEFYGEIASGDASSQSLLTMEIQPSSTPGSASYTMRLRAKISRLWLRTVRCWPSV 209

Query: 187 LPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRYQILGVFLLIQ 246
           LP+VREFLQL LR NLMFFYFEGLYYHISKR AGIRYVFIGKP+NQRPRYQILGVFLLIQ
Sbjct: 210 LPLVREFLQLALRTNLMFFYFEGLYYHISKRAAGIRYVFIGKPSNQRPRYQILGVFLLIQ 269

Query: 247 LCIIAAEGLRRSNLSSIASSVHHTSLGFQQASTGRGLPVLNEEGSLIPSESDKGGWVLDS 306
           LCIIAAEGLRRS+LSS++SS++  S G   +S+GRGLPVLNEEG+LI  + D G WV D 
Sbjct: 270 LCIIAAEGLRRSSLSSVSSSINPASFGANPSSSGRGLPVLNEEGNLISVDGDSGNWVSDP 329

Query: 307 T----STSEVCLKCT 317
           +    +T     KCT
Sbjct: 330 SHSEFNTGSGISKCT 344

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297825791|ref|XP_002880778.1| hypothetical protein ARALYDRAFT_481492 [Arabidopsis lyrata subsp. lyrata] gi|297326617|gb|EFH57037.1| hypothetical protein ARALYDRAFT_481492 [Arabidopsis lyrata subsp. lyrata]

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 221/317 (69%), Positives = 250/317 (78%), Gaps = 5/317 (1%)

Query: 4   GETRRFPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLY 63
           G  RRFP AAQPEIMRAAEKD+QYASFI++ACRDAFR LFGTR+A+AYQ E KL+GQMLY
Sbjct: 21  GGIRRFPLAAQPEIMRAAEKDDQYASFIHEACRDAFRHLFGTRIALAYQKEMKLLGQMLY 80

Query: 64  YVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRG 123
           YVLTTGSGQQTLGEEYCDI QV GP  L PTPARRALFI+YQTAVPYIAERIS+R A++ 
Sbjct: 81  YVLTTGSGQQTLGEEYCDIIQVAGPYGLSPTPARRALFILYQTAVPYIAERISTRAATQA 140

Query: 124 IALAESQSDEFDRYNAAGS-SRDQSLETIESPSSSAPRV-YSAVSRLKEKLNGLRLYVIR 181
           +   ES  DEF  ++A  S S   S   I+ PSSS      S V RLK++L  L    I+
Sbjct: 141 VTFDES--DEFLGHSALESGSHIHSPRMIDLPSSSQIETSASVVPRLKDRLKRLWHRAIQ 198

Query: 182 RWPMVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRYQILGV 241
           RWP+VLP+ RE LQLVLRANLM FYFEGLYYHISKR +G+RYVFIGK  NQRPRYQILGV
Sbjct: 199 RWPVVLPVAREVLQLVLRANLMLFYFEGLYYHISKRASGVRYVFIGKQLNQRPRYQILGV 258

Query: 242 FLLIQLCIIAAEGLRRSNLSSIASSVHHTSLGFQQASTGRGLPVLNEEGSLIPSESDKGG 301
           FLL+QLCI+AAEGLRRSNLSSI SS+   S+G  Q S GRGLPVLNEEG+LI SE++KG 
Sbjct: 259 FLLVQLCILAAEGLRRSNLSSITSSIQQASIGSYQTSGGRGLPVLNEEGNLITSEAEKGN 318

Query: 302 W-VLDSTSTSEVCLKCT 317
           W   DS+ST E   KCT
Sbjct: 319 WSTSDSSSTLEAVGKCT 335

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147810850|emb|CAN71793.1| hypothetical protein VITISV_022107 [Vitis vinifera]

 Score =  426 bits (1094), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 214/275 (77%), Positives = 234/275 (85%), Gaps = 1/275 (0%)

Query: 6   TRRFPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYV 65
           +RRFP AAQPEIMRAAEKD+QYAS +Y+ACRDAFR LFGTRVAVAYQSETKL+GQMLYY+
Sbjct: 32  SRRFPLAAQPEIMRAAEKDDQYASHVYEACRDAFRHLFGTRVAVAYQSETKLLGQMLYYI 91

Query: 66  LTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRGIA 125
           LTTGSGQQTLGEEYCDITQV GP  L PTPARRALFI+YQTAVPYIAER+SSRVA+RGIA
Sbjct: 92  LTTGSGQQTLGEEYCDITQVAGPYGLSPTPARRALFILYQTAVPYIAERVSSRVAARGIA 151

Query: 126 LAESQSDEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAV-SRLKEKLNGLRLYVIRRWP 184
           +A++Q+DE    N  GSS+ QS    E PSSSA     +V SRLKEK N   LY ++RWP
Sbjct: 152 IADAQADELYGNNVPGSSQVQSSAITEIPSSSASGASLSVLSRLKEKFNRSWLYAVQRWP 211

Query: 185 MVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRYQILGVFLL 244
           +VLP+ REFLQLVLR NLMFFYFEGLYYHISKR AGIRYVFIGK  NQRPRYQILGVFLL
Sbjct: 212 VVLPLAREFLQLVLRTNLMFFYFEGLYYHISKRAAGIRYVFIGKSLNQRPRYQILGVFLL 271

Query: 245 IQLCIIAAEGLRRSNLSSIASSVHHTSLGFQQAST 279
           IQLCIIAAEGLRR NLSSIASSVH T LG  Q +T
Sbjct: 272 IQLCIIAAEGLRRRNLSSIASSVHRTPLGAHQTAT 306

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356552390|ref|XP_003544551.1| PREDICTED: peroxisome biogenesis factor 10-like [Glycine max]

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 215/299 (71%), Positives = 239/299 (79%), Gaps = 2/299 (0%)

Query: 5   ETRRFPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYY 64
           E RRFP AAQPE+MRAAEKD+QYASF+Y+ACRDAFR LFGTRVAVAYQ+ETKL+GQMLYY
Sbjct: 27  EPRRFPLAAQPEMMRAAEKDDQYASFVYEACRDAFRHLFGTRVAVAYQNETKLLGQMLYY 86

Query: 65  VLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRGI 124
           VLTTGSGQQTLGEEYCDITQV GP  LPPTPARRALF+VYQTA+PYIAERISSR+ASRGI
Sbjct: 87  VLTTGSGQQTLGEEYCDITQVAGPYGLPPTPARRALFVVYQTAIPYIAERISSRIASRGI 146

Query: 125 ALAESQSDEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLKEKLNGLRLYVIRRWP 184
            LA+ +S E    NA  S   Q   T  S SS      + +SRLK K++   L++++RWP
Sbjct: 147 VLADYESAEGFGENAHRSHSAQISGTSPSSSSGQ--SVTTLSRLKGKMSAFWLHLVQRWP 204

Query: 185 MVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRYQILGVFLL 244
            +LP VRE LQLVLRANLM FYFEGLYYHISKR AGIRYVFIGK +NQRPRYQILGVFLL
Sbjct: 205 TMLPFVRELLQLVLRANLMLFYFEGLYYHISKRAAGIRYVFIGKASNQRPRYQILGVFLL 264

Query: 245 IQLCIIAAEGLRRSNLSSIASSVHHTSLGFQQASTGRGLPVLNEEGSLIPSESDKGGWV 303
           IQLCIIAAEGLRR NL+SI  SVH  S      S G GLPVLNEEG+L   + DK  WV
Sbjct: 265 IQLCIIAAEGLRRRNLTSITGSVHQASFATHDRSAGHGLPVLNEEGNLATPDIDKRSWV 323

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356564027|ref|XP_003550258.1| PREDICTED: peroxisome biogenesis factor 10-like [Glycine max]

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/301 (71%), Positives = 238/301 (79%), Gaps = 2/301 (0%)

Query: 3   SGETRRFPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQML 62
           S E RRFP AAQPEIMRAAEKD+QYASF+Y+ACRDAFR LFGTRVAVAYQ+ETKL+GQML
Sbjct: 25  STEPRRFPLAAQPEIMRAAEKDDQYASFVYEACRDAFRHLFGTRVAVAYQNETKLLGQML 84

Query: 63  YYVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASR 122
           YYVLTTGSGQQTLGEEYCDITQV GP  LPPTPARRALFIVYQTA+PYIAERISSR+AS+
Sbjct: 85  YYVLTTGSGQQTLGEEYCDITQVAGPYGLPPTPARRALFIVYQTAIPYIAERISSRIASQ 144

Query: 123 GIALAESQSDEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLKEKLNGLRLYVIRR 182
           GI L +S+  E    NA  S   Q  +   S SS      + +SRLK KL+   L++++R
Sbjct: 145 GIVLTDSEFAEGFGENAHSSHSSQISDASLSSSSGQ--SVTTLSRLKGKLSAFWLHLVQR 202

Query: 183 WPMVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRYQILGVF 242
           WP +LP VRE LQLVLRANLM FYFEGLYYHI KR A IRYVFIGK +NQRPRYQILGVF
Sbjct: 203 WPTMLPFVRELLQLVLRANLMLFYFEGLYYHIPKRAASIRYVFIGKASNQRPRYQILGVF 262

Query: 243 LLIQLCIIAAEGLRRSNLSSIASSVHHTSLGFQQASTGRGLPVLNEEGSLIPSESDKGGW 302
           LLIQLCI+AAEGLRR N +SIA SVH  S      S G GLPVLNEEG+L   + DKG W
Sbjct: 263 LLIQLCILAAEGLRRRNFTSIAGSVHQASFTNHDRSAGHGLPVLNEEGTLATPDIDKGSW 322

Query: 303 V 303
           V
Sbjct: 323 V 323

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18401101|ref|NP_565621.1| peroxin 10 [Arabidopsis thaliana] gi|34098752|sp|Q9SYU4.1|PEX10_ARATH RecName: Full=Peroxisome biogenesis factor 10; AltName: Full=PER10; AltName: Full=Peroxin-10; AltName: Full=Peroxisomal biogenesis factor 10; Short=AtPEX10; Short=AthPEX10; AltName: Full=Peroxisome assembly protein 10; AltName: Full=Pex10p gi|4337011|gb|AAD18035.1| zinc-binding peroxisomal integral membrane protein [Arabidopsis thaliana] gi|20196940|gb|AAC14514.2| putative peroxisome assembly protein PER8 [Arabidopsis thaliana] gi|26450822|dbj|BAC42519.1| putative zinc-binding peroxisomal integral membrane protein PEX10 [Arabidopsis thaliana] gi|28950961|gb|AAO63404.1| At2g26350 [Arabidopsis thaliana] gi|330252734|gb|AEC07828.1| peroxin 10 [Arabidopsis thaliana]

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 215/315 (68%), Positives = 244/315 (77%), Gaps = 8/315 (2%)

Query: 4   GETRRFPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLY 63
           G  RRFP AAQPEIMRAAEKD+QYASFI++ACRDAFR LFGTR+A+AYQ E KL+GQMLY
Sbjct: 21  GGIRRFPLAAQPEIMRAAEKDDQYASFIHEACRDAFRHLFGTRIALAYQKEMKLLGQMLY 80

Query: 64  YVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRG 123
           YVLTTGSGQQTLGEEYCDI QV GP  L PTPARRALFI+YQTAVPYIAERIS+R A++ 
Sbjct: 81  YVLTTGSGQQTLGEEYCDIIQVAGPYGLSPTPARRALFILYQTAVPYIAERISTRAATQA 140

Query: 124 IALAESQSDEFDRYNAAGSSRDQSLETIESPSSSAPRV-YSAVSRLKEKLNGLRLYVIRR 182
           +   ES  DEF      G S   S   I+ PSSS      S VSRL ++L       I+R
Sbjct: 141 VTFDES--DEF-----FGDSHIHSPRMIDLPSSSQVETSTSVVSRLNDRLMRSWHRAIQR 193

Query: 183 WPMVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRYQILGVF 242
           WP+VLP+ RE LQLVLRANLM FYFEG YYHISKR +G+RYVFIGK  NQRPRYQILGVF
Sbjct: 194 WPVVLPVAREVLQLVLRANLMLFYFEGFYYHISKRASGVRYVFIGKQLNQRPRYQILGVF 253

Query: 243 LLIQLCIIAAEGLRRSNLSSIASSVHHTSLGFQQASTGRGLPVLNEEGSLIPSESDKGGW 302
           LLIQLCI+AAEGLRRSNLSSI SS+   S+G  Q S GRGLPVLNEEG+LI SE++KG W
Sbjct: 254 LLIQLCILAAEGLRRSNLSSITSSIQQASIGSYQTSGGRGLPVLNEEGNLITSEAEKGNW 313

Query: 303 VLDSTSTSEVCLKCT 317
               ++++E   KCT
Sbjct: 314 STSDSTSTEAVGKCT 328

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|7576235|emb|CAB87983.1| Pex10p [Arabidopsis thaliana]

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 214/315 (67%), Positives = 243/315 (77%), Gaps = 8/315 (2%)

Query: 4   GETRRFPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLY 63
           G  RRFP AAQPEIMRAAEKD+QYASFI++ACRDAFR LFGTR+A+AYQ E KL+GQMLY
Sbjct: 21  GGIRRFPLAAQPEIMRAAEKDDQYASFIHEACRDAFRHLFGTRIALAYQKEMKLLGQMLY 80

Query: 64  YVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRG 123
           YVLTTGSGQQTLGEEYCDI QV GP  L PTPARRALFI+YQTAVPYIAERIS+R A++ 
Sbjct: 81  YVLTTGSGQQTLGEEYCDIIQVAGPYGLSPTPARRALFILYQTAVPYIAERISTRAATQA 140

Query: 124 IALAESQSDEFDRYNAAGSSRDQSLETIESPSSSAPRV-YSAVSRLKEKLNGLRLYVIRR 182
           +   ES  DEF      G S   S   I+ PSSS      S VSRL ++L       I+R
Sbjct: 141 VTFDES--DEF-----FGDSHIHSPRMIDLPSSSQVETSTSVVSRLNDRLKRSWHRAIQR 193

Query: 183 WPMVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRYQILGVF 242
           WP+VL + RE LQLVLRANLM FYFEG YYHISKR +G+RYVFIGK  NQRPRYQILGVF
Sbjct: 194 WPVVLLVAREVLQLVLRANLMLFYFEGFYYHISKRASGVRYVFIGKQLNQRPRYQILGVF 253

Query: 243 LLIQLCIIAAEGLRRSNLSSIASSVHHTSLGFQQASTGRGLPVLNEEGSLIPSESDKGGW 302
           LLIQLCI+AAEGLRRSNLSSI SS+   S+G  Q S GRGLPVLNEEG+LI SE++KG W
Sbjct: 254 LLIQLCILAAEGLRRSNLSSITSSIQQASIGSYQTSGGRGLPVLNEEGNLITSEAEKGNW 313

Query: 303 VLDSTSTSEVCLKCT 317
               ++++E   KCT
Sbjct: 314 STSDSTSTEAVGKCT 328

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	322
TAIR|locus:2057780	381	PEX10 "peroxin 10" [Arabidopsi	0.950	0.803	0.696	7.2e-107
ZFIN|ZDB-GENE-041010-71	318	pex10 "peroxisome biogenesis f	0.326	0.330	0.380	1.4e-24
DICTYBASE|DDB_G0282693	374	pex10 "peroxisome biogenesis f	0.341	0.294	0.357	1.9e-23
ASPGD|ASPL0000031841	373	AN5681 [Emericella nidulans (t	0.773	0.667	0.289	2.9e-23
UNIPROTKB|I3LSN3	326	LOC100736805 "Uncharacterized	0.319	0.315	0.368	1.3e-21
UNIPROTKB|I3L768	326	LOC100624129 "Uncharacterized	0.319	0.315	0.368	2.1e-21
UNIPROTKB|D6RA89	209	PEX10 "Peroxisome biogenesis f	0.322	0.497	0.383	2.4e-20
UNIPROTKB|E1BST1	327	PEX10 "Uncharacterized protein	0.322	0.318	0.365	4.7e-20
UNIPROTKB|D6RBB0	324	PEX10 "Peroxisome biogenesis f	0.322	0.320	0.383	1.1e-19
UNIPROTKB|O60683	326	PEX10 "Peroxisome biogenesis f	0.322	0.319	0.383	1.1e-19

TAIR|locus:2057780 PEX10 "peroxin 10" [Arabidopsis thaliana (taxid:3702)]

 Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
 Identities = 220/316 (69%), Positives = 245/316 (77%)

Query:     4 GETRRFPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLY 63
             G  RRFP AAQPEIMRAAEKD+QYASFI++ACRDAFR LFGTR+A+AYQ E KL+GQMLY
Sbjct:    21 GGIRRFPLAAQPEIMRAAEKDDQYASFIHEACRDAFRHLFGTRIALAYQKEMKLLGQMLY 80

Query:    64 YVLTTGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRG 123
             YVLTTGSGQQTLGEEYCDI QV GP  L PTPARRALFI+YQTAVPYIAERIS+R A++ 
Sbjct:    81 YVLTTGSGQQTLGEEYCDIIQVAGPYGLSPTPARRALFILYQTAVPYIAERISTRAATQA 140

Query:   124 IALAESQSDEFDRYNAAGSSRDQSLETIESPSSSAPRVY-SAVSRLKEKLNGLRLYVIRR 182
             +   ES  DEF      G S   S   I+ PSSS      S VSRL ++L       I+R
Sbjct:   141 VTFDES--DEF-----FGDSHIHSPRMIDLPSSSQVETSTSVVSRLNDRLMRSWHRAIQR 193

Query:   183 WPMVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGKPTNQRPRYQILGVF 242
             WP+VLP+ RE LQLVLRANLM FYFEG YYHISKR +G+RYVFIGK  NQRPRYQILGVF
Sbjct:   194 WPVVLPVAREVLQLVLRANLMLFYFEGFYYHISKRASGVRYVFIGKQLNQRPRYQILGVF 253

Query:   243 LLIQLCIIAAEGLRRSNLSSIASSVHHTSLGFQQASTGRGLPVLNEEGSLIPSESDKGGW 302
             LLIQLCI+AAEGLRRSNLSSI SS+   S+G  Q S GRGLPVLNEEG+LI SE++KG W
Sbjct:   254 LLIQLCILAAEGLRRSNLSSITSSIQQASIGSYQTSGGRGLPVLNEEGNLITSEAEKGNW 313

Query:   303 -VLDSTSTSEVCLKCT 317
                DSTST  V  KCT
Sbjct:   314 STSDSTSTEAVG-KCT 328

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0007031 "peroxisome organization" evidence=IMP

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0005777 "peroxisome" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009853 "photorespiration" evidence=IMP

GO:0010381 "attachment of peroxisome to chloroplast" evidence=IMP

GO:0006635 "fatty acid beta-oxidation" evidence=RCA;IMP

GO:0016558 "protein import into peroxisome matrix" evidence=RCA;IMP

ZFIN|ZDB-GENE-041010-71 pex10 "peroxisome biogenesis factor 10" [Danio rerio (taxid:7955)]

 Score = 204 (76.9 bits), Expect = 1.4e-24, Sum P(2) = 1.4e-24
 Identities = 40/105 (38%), Positives = 64/105 (60%)

Query:    11 PAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGS 70
             PA QP+++R+ +KDE Y + + +   + F    G+R  + ++ E +L+  + YY+LTT S
Sbjct:     5 PANQPQLIRSCQKDEYYQNNLTNNANELFHTFAGSRRWLQWRKEIELLSDLTYYILTTLS 64

Query:    71 GQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERI 115
             G QTLGEEY  I QV   +R  P+  RR   I + T VPY+ +++
Sbjct:    65 GYQTLGEEYVSIIQVDPSKRRIPSRIRRTALICFHTFVPYLLDKV 109

GO:0016558 "protein import into peroxisome matrix" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005779 "integral to peroxisomal membrane" evidence=IEA

GO:0007031 "peroxisome organization" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

DICTYBASE|DDB_G0282693 pex10 "peroxisome biogenesis factor 10" [Dictyostelium discoideum (taxid:44689)]

 Score = 192 (72.6 bits), Expect = 1.9e-23, Sum P(2) = 1.9e-23
 Identities = 40/112 (35%), Positives = 65/112 (58%)

Query:    12 AAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSG 71
             A QP+I+R+++KDE Y     D C +   ++ G R  +  QSE+KL+   +YY+LTT  G
Sbjct:    81 ADQPDILRSSQKDEYYKKLFEDQCFEMLTRITGPRFIMNRQSESKLLANTIYYLLTTMIG 140

Query:    72 QQTLGEEYCDITQVVGPQ-RLPPTPARRALFIVYQTAVPYIAERISSRVASR 122
              QTLGEEYC++ ++      +P  P R  L+  +  A PY+ ++   ++  R
Sbjct:   141 SQTLGEEYCNLRKIKDKTFSIPSIPDRIKLYFFHLLA-PYLIKKSLPKLFQR 191

GO:0016558 "protein import into peroxisome matrix" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0007031 "peroxisome organization" evidence=IEA;ISS

GO:0005779 "integral to peroxisomal membrane" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA;ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

ASPGD|ASPL0000031841 AN5681 [Emericella nidulans (taxid:162425)]

 Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 78/269 (28%), Positives = 132/269 (49%)

Query:     9 FPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTT 68
             +P A  P+I+R+ EKD    + + +  +   R L G R A  Y    K + ++LY+ LTT
Sbjct:    22 YPFATSPDIIRSHEKDAFLTANLANEAQSIIRTLRGARYAHTYSEAIKHLTELLYFSLTT 81

Query:    69 GSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRGIALAE 128
              +G +TLGEEYCD+ Q+       P+  RR  +I+    VP+  +RI      R  A  E
Sbjct:    82 LTGNRTLGEEYCDLVQLEDDTLRLPSIGRRVGYILSSIMVPWTLQRILPGFRQRLRAKLE 141

Query:   129 SQSDEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLKEKLNGLRLYVIRRWPMVLP 188
              +S    +  A   ++D +   +++ S   P      ++L+     ++ Y++     +  
Sbjct:   142 -RSIARQQLKAQ-QAKDSNKTPLKNKSKQPP----FFTKLR-----IQKYILEHLDSITS 190

Query:   189 IVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIGK--PTNQRPRYQILGVFLLIQ 246
                  L  +   ++  FYF G YYH+SKR  G+RYVF  K     QR  Y++LGV L++Q
Sbjct:   191 -----LSPIYALSIATFYFTGSYYHLSKRFWGLRYVFTKKLEENEQRVGYEVLGVLLVLQ 245

Query:   247 LCIIAAEGLRR--SNLSSIASSVHHTSLG 273
             + + +   +++   +L S    VH  + G
Sbjct:   246 IAVQSILHVKKVSHSLQSEDQDVHSETSG 274

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005779 "integral to peroxisomal membrane" evidence=IEA

GO:0000151 "ubiquitin ligase complex" evidence=IEA

GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0016558 "protein import into peroxisome matrix" evidence=IEA

GO:0016567 "protein ubiquitination" evidence=IEA

UNIPROTKB|I3LSN3 LOC100736805 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 192 (72.6 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
 Identities = 38/103 (36%), Positives = 60/103 (58%)

Query:    12 AAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSG 71
             A+ PE++RAA+KD+ Y   +  A  DA   L G +  + ++ E +LV  + Y+ LTT +G
Sbjct:     6 ASPPEVVRAAQKDDYYRGGLRSAAGDALHSLAGAKKWLEWRRELELVSDVAYFGLTTLAG 65

Query:    72 QQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAER 114
              QTLGEEY  + QV   Q   P+  RR + +   T +PY+ ++
Sbjct:    66 YQTLGEEYVSVVQVDPSQSRVPSRLRRGILVALHTVLPYVLDK 108

GO:0016558 "protein import into peroxisome matrix" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005779 "integral to peroxisomal membrane" evidence=IEA

UNIPROTKB|I3L768 LOC100624129 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 192 (72.6 bits), Expect = 2.1e-21, Sum P(2) = 2.1e-21
 Identities = 38/103 (36%), Positives = 60/103 (58%)

Query:    12 AAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSG 71
             A+ PE++RAA+KD+ Y   +  A  DA   L G +  + ++ E +LV  + Y+ LTT +G
Sbjct:     6 ASPPEVVRAAQKDDYYRGGLRSAAGDALHSLAGAKKWLEWRRELELVSDVAYFGLTTLAG 65

Query:    72 QQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAER 114
              QTLGEEY  + QV   Q   P+  RR + +   T +PY+ ++
Sbjct:    66 YQTLGEEYVSVVQVDPSQSRVPSRLRRGILVALHTVLPYVLDK 108

GO:0016558 "protein import into peroxisome matrix" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005779 "integral to peroxisomal membrane" evidence=IEA

UNIPROTKB|D6RA89 PEX10 "Peroxisome biogenesis factor 10" [Homo sapiens (taxid:9606)]

 Score = 184 (69.8 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
 Identities = 41/107 (38%), Positives = 61/107 (57%)

Query:    10 PPAAQP-EIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTT 68
             P AA P E++RAA+KDE Y   +  A   A   L G R  + ++ E +L+  + Y+ LTT
Sbjct:     3 PAAASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLEWRKEVELLSDVAYFGLTT 62

Query:    69 GSGQQTLGEEYCDITQVVGPQRLP-PTPARRALFIVYQTAVPYIAER 114
              +G QTLGEEY  I QV  P R+  P+  RR + +     +PY+ ++
Sbjct:    63 LAGYQTLGEEYVSIIQV-DPSRIHVPSSLRRGVLVTLHAVLPYLLDK 108

GO:0005779 "integral to peroxisomal membrane" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016558 "protein import into peroxisome matrix" evidence=IEA

UNIPROTKB|E1BST1 PEX10 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 180 (68.4 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
 Identities = 38/104 (36%), Positives = 58/104 (55%)

Query:    11 PAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGS 70
             PA    ++R  +KDE Y S +      A   + G +  + ++ E +L+  + Y+ LTT S
Sbjct:     5 PAGPARLVRCGQKDELYRSGLRSGAGTALHGIAGAKKWLEWRREIELLSDVAYFALTTLS 64

Query:    71 GQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAER 114
             G QTLGEEY +I QV   ++  P+  RRA+F+   T VPY  E+
Sbjct:    65 GYQTLGEEYVNIVQVDSTKKRVPSFLRRAIFVSLHTIVPYYLEK 108

GO:0005779 "integral to peroxisomal membrane" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0016558 "protein import into peroxisome matrix" evidence=IEA

UNIPROTKB|D6RBB0 PEX10 "Peroxisome biogenesis factor 10" [Homo sapiens (taxid:9606)]

 Score = 184 (69.8 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
 Identities = 41/107 (38%), Positives = 61/107 (57%)

Query:    10 PPAAQP-EIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTT 68
             P AA P E++RAA+KDE Y   +  A   A   L G R  + ++ E +L+  + Y+ LTT
Sbjct:     3 PAAASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLEWRKEVELLSDVAYFGLTT 62

Query:    69 GSGQQTLGEEYCDITQVVGPQRLP-PTPARRALFIVYQTAVPYIAER 114
              +G QTLGEEY  I QV  P R+  P+  RR + +     +PY+ ++
Sbjct:    63 LAGYQTLGEEYVSIIQV-DPSRIHVPSSLRRGVLVTLHAVLPYLLDK 108

GO:0005779 "integral to peroxisomal membrane" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016558 "protein import into peroxisome matrix" evidence=IEA

UNIPROTKB|O60683 PEX10 "Peroxisome biogenesis factor 10" [Homo sapiens (taxid:9606)]

 Score = 184 (69.8 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
 Identities = 41/107 (38%), Positives = 61/107 (57%)

Query:    10 PPAAQP-EIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTT 68
             P AA P E++RAA+KDE Y   +  A   A   L G R  + ++ E +L+  + Y+ LTT
Sbjct:     3 PAAASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLEWRKEVELLSDVAYFGLTT 62

Query:    69 GSGQQTLGEEYCDITQVVGPQRLP-PTPARRALFIVYQTAVPYIAER 114
              +G QTLGEEY  I QV  P R+  P+  RR + +     +PY+ ++
Sbjct:    63 LAGYQTLGEEYVSIIQV-DPSRIHVPSSLRRGVLVTLHAVLPYLLDK 108

GO:0005779 "integral to peroxisomal membrane" evidence=IEA;IDA

GO:0008270 "zinc ion binding" evidence=IEA;NAS

GO:0016558 "protein import into peroxisome matrix" evidence=IMP;IDA

GO:0007031 "peroxisome organization" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0008022 "protein C-terminus binding" evidence=IPI

GO:0005778 "peroxisomal membrane" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9SYU4	PEX10_ARATH	No assigned EC number	0.6825	0.9534	0.8057	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	GSVIVG00032261001	SubName- Full=Chromosome chr4 scaffold_6, whole genome shotgun sequence; (400 aa)
		(Vitis vinifera)
Predicted Functional Partners:
	GSVIVG00032871001	SubName- Full=Chromosome undetermined scaffold_62, whole genome shotgun sequence; (393 aa)					•		•		0.554
	GSVIVG00034358001	SubName- Full=Chromosome chr9 scaffold_7, whole genome shotgun sequence; (346 aa)					•		•		0.463
	GSVIVG00009597001	SubName- Full=Chromosome chr2 scaffold_241, whole genome shotgun sequence; (243 aa)					•		•		0.435
	GSVIVG00026327001	SubName- Full=Chromosome chr15 scaffold_37, whole genome shotgun sequence; (278 aa)				•			•		0.413

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	322
pfam04757	215	pfam04757, Pex2_Pex12, Pex2 / Pex12 amino terminal	4e-38

>gnl|CDD|218247 pfam04757, Pex2_Pex12, Pex2 / Pex12 amino terminal region

 Score =  134 bits (339), Expect = 4e-38
 Identities = 56/228 (24%), Positives = 88/228 (38%), Gaps = 41/228 (17%)

Query: 24  DEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDIT 83
           DE+  S +    R   R L G R  + Y  E KL+ ++LY  LT   G  TLGEE+  + 
Sbjct: 1   DEELESLLRPQLRYILRYLAGARFLLNYFDELKLLLKLLYERLTLLRGNATLGEEFYGLK 60

Query: 84  QV-VGPQRLPPTPARRALFIVYQTAVPYIAERISSRVASRGIALAESQSDEFDRYNAAGS 142
           +V    +    +  +R L ++     PY+  ++ S +        E+      R      
Sbjct: 61  RVNEDDEGRLLSRKQRLLSLLLLVLGPYLLRKLDSLLERLLEEDLENSLLRQSR------ 114

Query: 143 SRDQSLETIESPSSSAPRVYSAVSRLKEKLNGLRLYVIRRWPMVLPIVREFLQLVLRANL 202
                                               + RR   + P +   L+L+   + 
Sbjct: 115 ---------------------------------LSRLKRRLLKLYPALNALLELLNLLHF 141

Query: 203 MFFYFEGLYYHISKRTAGIRYVFIGKPTNQR-PRYQILGVFLLIQLCI 249
           + F F G YY +SKR  GIRYV + +   +R   Y+ LG  LL QL +
Sbjct: 142 LLFLFGGTYYSLSKRLLGIRYVRLNQSDLERNVSYEFLGRLLLWQLFV 189

This region is found at the N terminal of a number of known and predicted peroxins including Pex2, Pex10 and Pex12. This conserved region is usually associated with a C terminal ring finger (pfam00097) domain. Length = 215

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	322
KOG0317	293	consensus Predicted E3 ubiquitin ligase, integral	100.0
PF04757	229	Pex2_Pex12: Pex2 / Pex12 amino terminal region; In	99.97
COG5574	271	PEX10 RING-finger-containing E3 ubiquitin ligase [	97.56

>KOG0317 consensus Predicted E3 ubiquitin ligase, integral peroxisomal membrane protein [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=9e-47  Score=352.81  Aligned_cols=239  Identities=30%  Similarity=0.457  Sum_probs=190.3

Q ss_pred             CCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHhcchhHHHhhhhHHHHHHHHHHHHHHhcCCCCCcchhhhccEeecCCC
Q 020711           10 PPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVVGPQ   89 (322)
Q Consensus        10 P~A~qPeIIRA~QKDe~y~~~L~~~l~dvlr~l~G~R~~~~~~~Ei~lls~lLY~~LTTl~G~QTLGEEYcdIvqV~~~~   89 (322)
                      ++|++|||||++||||+|.+.+.++++++++.++|+|.|++|++|+..+|+++||..||..++|||||||++|+++|+..
T Consensus         5 ~~a~~p~ivr~tq~de~~~~~l~~~~s~~~~~lag~r~~i~~~~~l~~~a~~ly~~~at~~~~~tlgEEy~~i~~~~~~~   84 (293)
T KOG0317|consen    5 AHADPPEIVRSTQKDEYYIGYLISSLSGLSRTLAGPRAWIRYRKELVLIAEVLYFGFATDARYQTLGEEYVSIIESNPLR   84 (293)
T ss_pred             cccCchHHHHHhhhHHHhhhhhhhhhHhHhhhhcchHHHHhhccchhhhhchhhheeehhccccccchhhhhhheecCCc
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCchhHHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhccchhhhhhhccCCCCcccccccCCCCCCcchhhhHHHHHH
Q 020711           90 RLPPTPARRALFIVYQTAVPYIAERISSRVASRGIALAESQSDEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLK  169 (322)
Q Consensus        90 ~~~Ps~~RR~l~Ill~~l~PYll~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  169 (322)
                      .++|+..+|..||++|.+.||+.+|+.+++...        +++.             +.              ..+.  
T Consensus        85 ~~~pssl~~~~~v~~~~v~~~~~~~l~~~l~q~--------l~~~-------------~~--------------i~p~--  127 (293)
T KOG0317|consen   85 LRLPSSLRRIVFVASHLVLPLLLDKLTKKLMQA--------LQSS-------------SE--------------ILPQ--  127 (293)
T ss_pred             cccCchhhhHHHHHHHHHHHHHhHHHHHHHHHh--------hccC-------------cc--------------cccH--
Confidence            999999999999999999999999998886321        1000             00              1111  


Q ss_pred             HHHhhHHHHHHhhCCcchHHHHHHHHHHHHHHHHHHhhcccccchhhhhcCceeeeeC----CCCCCCcchhHHHHHHHH
Q 020711          170 EKLNGLRLYVIRRWPMVLPIVREFLQLVLRANLMFFYFEGLYYHISKRTAGIRYVFIG----KPTNQRPRYQILGVFLLI  245 (322)
Q Consensus       170 ~~~~~~~~~~~~~l~~~~~~~~~~l~~l~rlHLalFY~~G~YY~lsKRl~GIrYv~~~----~~~~~r~sY~lLG~llll  245 (322)
                        .++.             +.++ +..+.++|+++|||.|.||||+||++|||||+.+    ++.+.+..|++|||++|+
T Consensus       128 --~~~~-------------~l~~-l~~v~~~h~~lFY~~g~~y~IskRltgI~yv~~~~~~~~~~~~~q~y~iLg~I~L~  191 (293)
T KOG0317|consen  128 --ARRN-------------FLRG-LFAVLRAHKALFYINGSFYSISKRLTGIRYVLARTLKGHEANASQPYKILGYILLI  191 (293)
T ss_pred             --HHHH-------------Hhhh-HHHHHHHhhheEEecCchHHHHHhhccceEEEEecccccccccccceeeechhhHH
Confidence              0100             1122 2277899999999999999999999999999985    455678999999999999


Q ss_pred             HHHHHHHHhhhhhcccccccccccccccccccccCCCcccccccCCCCCCCCCCCCccccCCcCcccccccccccc
Q 020711          246 QLCIIAAEGLRRSNLSSIASSVHHTSLGFQQASTGRGLPVLNEEGSLIPSESDKGGWVLDSTSTSEVCLKCTNLIM  321 (322)
Q Consensus       246 QL~v~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~c~lcl~  321 (322)
                      |+++.....+-.             +.+.|+.+.+++.+    ++++....   -.|-++.++.++..+||+|||+
T Consensus       192 ql~~slg~r~~~-------------s~~q~~~s~~e~~~----e~~~~~~~---~~~s~~~~~i~~a~~kC~LCLe  247 (293)
T KOG0317|consen  192 QLLLSLGSRLYA-------------SFLQHKRSSTESIE----ESKLNHSK---LEDSNSLSSIPEATRKCSLCLE  247 (293)
T ss_pred             HHHHhhhhHHHH-------------HHHhcccccccccc----cccccccc---hhhccCCccCCCCCCceEEEec
Confidence            977665444331             45666666666655    22221111   1143455568888999999997

>PF04757 Pex2_Pex12: Pex2 / Pex12 amino terminal region; InterPro: IPR006845 This region is the N-terminal part of a number of peroxisomal biogenesis proteins, including Pex2, Pex10 and Pex12, which contain two predicted transmembrane segments

Probab=99.97  E-value=1.8e-29  Score=230.00  Aligned_cols=202  Identities=30%  Similarity=0.381  Sum_probs=159.4

Q ss_pred             hHHHHHHHHHHHHHHHHHhc---chhHHHhhhhHHHHHHHHHHHHHHhcCCCCCcchhhhccEeecCC---C-CCCCchh
Q 020711           24 DEQYASFIYDACRDAFRQLF---GTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVVGP---Q-RLPPTPA   96 (322)
Q Consensus        24 De~y~~~L~~~l~dvlr~l~---G~R~~~~~~~Ei~lls~lLY~~LTTl~G~QTLGEEYcdIvqV~~~---~-~~~Ps~~   96 (322)
                      |+++.+.|+++++++++.+.   |++++++|.+|+.++.+++|+.+|+..+.||+|||||||.+|+..   . +..|+..
T Consensus         1 d~~l~~~L~~~l~~i~~~l~~~~~~~~~~~~~~Ei~~ll~~l~~~~tl~~~~~T~gE~~~~L~r~~~~~~~~~~~~ls~~   80 (229)
T PF04757_consen    1 DEELESLLKPALSYILQYLAQPRGPRRLLRYFDEIFLLLKLLYESLTLLRGNQTFGEEFYGLKRVNSRSSSRERRPLSRR   80 (229)
T ss_pred             ChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHhhCeEEeeccccccccCCCCHH
Confidence            89999999999999999999   999999999999999999999999999999999999999999832   3 7889999


Q ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHhhhhhhhhccchhhhhhhccCCCCcccccccCCCCCCcchhhhHHHHHHHHHhhHH
Q 020711           97 RRALFIVYQTAVPYIAERISSRVASRGIALAESQSDEFDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLKEKLNGLR  176 (322)
Q Consensus        97 RR~l~Ill~~l~PYll~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  176 (322)
                      +|.+++++.+++||+.+|+...+.+......     +....                 .....    ...+++.+.++.+
T Consensus        81 ~r~~~l~~~vl~PYl~~Kl~~~~~~~~~~~~-----~~~~~-----------------~~~~~----~~~~~~~~~~~~~  134 (229)
T PF04757_consen   81 QRLLSLLLLVLGPYLKEKLDSLLERLSERSA-----ESISS-----------------RSARA----RRARLKSKLKRRF  134 (229)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----ccccc-----------------hhhhh----hhhHHHHHHHHHH
Confidence            9999999999999999999877644311000     00000                 00000    0001111111111


Q ss_pred             HHHHhhCCcchHHHHHHHHHHHHHHHHHHhhccc-ccchhhhhcCceeeeeC-CCCCCCcchhHHHHHHHHHHHHHHHHh
Q 020711          177 LYVIRRWPMVLPIVREFLQLVLRANLMFFYFEGL-YYHISKRTAGIRYVFIG-KPTNQRPRYQILGVFLLIQLCIIAAEG  254 (322)
Q Consensus       177 ~~~~~~l~~~~~~~~~~l~~l~rlHLalFY~~G~-YY~lsKRl~GIrYv~~~-~~~~~r~sY~lLG~llllQL~v~~~~~  254 (322)
                             -.+.|.++.+...+..+|+++||+.|+ ||++++|++||+|++.. ++....++|+++|.+++.|+++..+..
T Consensus       135 -------~~~~~~~~~~~~~~~~~~~~~Fl~~g~~y~s~~~rllgi~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~  207 (229)
T PF04757_consen  135 -------VKLYPYLNALYELLNLLHLLLFLLGGTPYYSPSKRLLGIRYVRLSPSDLQRNPSYEFLGRQLLWQLLSEFLLF  207 (229)
T ss_pred             -------HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHhCcEEEECCccchhhhccHHHHHHHHHHHHHHHHHHH
Confidence                   124456788889999999999999999 99999999999999983 344455999999999999999999998


Q ss_pred             hhhh
Q 020711          255 LRRS  258 (322)
Q Consensus       255 lr~~  258 (322)
                      +.+.
T Consensus       208 ~~~~  211 (229)
T PF04757_consen  208 LLPL  211 (229)
T ss_pred             HHHH
Confidence            8865

The majority of these proteins have a C-terminal ring finger domain IPR001841 from INTERPRO.; GO: 0007031 peroxisome organization, 0005778 peroxisomal membrane

>COG5574 PEX10 RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=97.56  E-value=5.3e-06  Score=78.19  Aligned_cols=67  Identities=15%  Similarity=0.041  Sum_probs=56.5

Q ss_pred             CCCCCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHhcchhHHHhhhhHHHHHHHHHHHHHHhcCCCCCcchhhhccEeec
Q 020711            7 RRFPPAAQPEIMRAAEKDEQYASFIYDACRDAFRQLFGTRVAVAYQSETKLVGQMLYYVLTTGSGQQTLGEEYCDITQVV   86 (322)
Q Consensus         7 ~~fP~A~qPeIIRA~QKDe~y~~~L~~~l~dvlr~l~G~R~~~~~~~Ei~lls~lLY~~LTTl~G~QTLGEEYcdIvqV~   86 (322)
                      .++++|+.+-+++++|+   .++      ++++.+....-+-+.+..+.++..+++|+..+|     |.||||+|++.-.
T Consensus        14 lr~~~~~~~~~~Q~~~~---~~g------~~~i~~~~s~~~~n~~~~p~~v~~~~~~~p~~s-----t~~eE~vd~~~~~   79 (271)
T COG5574          14 LRNKRADLESVRQFAES---IEG------SNAISRRRSRFFSNVPGYPMDVREKILERPSGS-----TSEEEAVDLIAAI   79 (271)
T ss_pred             eecccccchhHHHHHHH---Hhh------hhhhhhhhhhhcccCCCCccchHHHhcccCccc-----cccchhhhhhhhc
Confidence            56899999999999998   222      566666777778899999999999999998888     9999999998765


Q ss_pred             C
Q 020711           87 G   87 (322)
Q Consensus        87 ~   87 (322)
                      +
T Consensus        80 r   80 (271)
T COG5574          80 R   80 (271)
T ss_pred             c
Confidence            4

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	322
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 48.7 bits (115), Expect = 2e-06
 Identities = 41/284 (14%), Positives = 91/284 (32%), Gaps = 51/284 (17%)

Query: 33  DACRD-AFRQLFGTRV---AVAYQSETKLVGQM---LYYVLTTGSGQQTLGEEYCDITQV 85
           D C     +     ++    +   +  + V +M   L Y +       +  +   +I   
Sbjct: 169 DVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQID--PNWTSRSDHSSNIKLR 226

Query: 86  VGPQR------LPPTPARRALFI---VYQTAVPYIAER--ISSR--VASRGIALAESQSD 132
           +   +      L   P    L +   V             +S +  + +R   + +  S 
Sbjct: 227 IHSIQAELRRLLKSKPYENCLLVLLNVQN---AKAWNAFNLSCKILLTTRFKQVTDFLSA 283

Query: 133 EFDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLKEKLNGLRLYVIRRWPMVLPIVRE 192
                + +      +L   E  S     +      L  +   L   V+   P  L I+ E
Sbjct: 284 A-TTTHISLDHHSMTLTPDEVKS-----LLLKY--LDCRPQDLPREVLTTNPRRLSIIAE 335

Query: 193 FLQ-LVLRANLMFFYFEGLYYHISKRTAGIRYVFIG--KPTNQRPRYQILGVF---LLIQ 246
            ++  +   +     ++  + +  K T  I    +   +P   R  +  L VF     I 
Sbjct: 336 SIRDGLATWD----NWK--HVNCDKLTTIIE-SSLNVLEPAEYRKMFDRLSVFPPSAHIP 388

Query: 247 ---LCIIAAEGLRRSNLSSIASSVHHTSLGFQQASTGR-GLPVL 286
              L +I  + + +S++  + + +H  SL  +Q       +P +
Sbjct: 389 TILLSLIWFD-VIKSDVMVVVNKLHKYSLVEKQPKESTISIPSI 431

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 40.6 bits (94), Expect = 6e-04
 Identities = 52/337 (15%), Positives = 98/337 (29%), Gaps = 98/337 (29%)

Query: 16  EIMRAAEKDEQYASFIYDACRD-------AFRQLFGTRVAVAYQSETKLVGQMLY----- 63
             ++  ++     + +Y   RD        F +   +R+    Q   KL  Q L      
Sbjct: 96  SPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL----QPYLKLR-QALLELRPA 150

Query: 64  -YVLT---TGSGQQTLGEEYCDITQVVGPQRLPPTPARRALFIVYQTAVPYIAERISSRV 119
             VL     GSG+  +  + C   +V   Q           F ++     +         
Sbjct: 151 KNVLIDGVLGSGKTWVALDVCLSYKV---QCKMD-------FKIF-----W--------- 186

Query: 120 ASRGIALAESQSDE--FDRYNAAGSSRDQSLETIESPSSSAPRVYSAVSRLKEKLNGLRL 177
               + L    S E   +         D +  +    SS+      +   ++ +L   RL
Sbjct: 187 ----LNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHS---IQAELR--RL 237

Query: 178 YVIRRWPMVLPIVRE---------F-LQ---LVL-R-ANLMFFYFEGLYYHIS------- 215
              + +   L ++           F L    L+  R   +  F       HIS       
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMT 297

Query: 216 ---KRTAGIRYVFIGKPTNQRPRYQILGVFLLIQLCIIAA---------EGLRRSNLSSI 263
                   +   ++       PR ++L       L IIA          +  +  N   +
Sbjct: 298 LTPDEVKSLLLKYLDCRPQDLPR-EVLTTNPRR-LSIIAESIRDGLATWDNWKHVNCDKL 355

Query: 264 ASSVHHTSLGFQQASTGRG----LPVLNEEGSLIPSE 296
            + +  +SL   + +  R     L V     + IP+ 
Sbjct: 356 TTII-ESSLNVLEPAEYRKMFDRLSVF-PPSAHIPTI 390

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00